##maf version=1 scoring=roast.v3.3 a score=5427.000000 s hg38.chrUn_KI270746v1 0 4 + 66486 GAAT s panTro5.chr2A 90260455 4 + 111504155 GAAT i panTro5.chr2A N 0 C 0 s gorGor5.CYUI01000341v1 123214 4 + 150013 gaat i gorGor5.CYUI01000341v1 N 0 C 0 s nomLeu3.chr4_GL397525_2_random 209403 4 + 1200634 gaag i nomLeu3.chr4_GL397525_2_random N 0 C 0 s macFas5.chr3 67294775 4 + 192294377 gaag i macFas5.chr3 N 0 C 0 s calJac3.chr8 108106209 4 - 128169293 gaag i calJac3.chr8 N 0 C 0 s saiBol1.JH378145 723851 4 - 18371965 gaag i saiBol1.JH378145 N 0 C 0 a score=299636.000000 s hg38.chrUn_KI270746v1 4 31 + 66486 TCAAGAATGCACGTTGTATTAAACCAGGTAA s panTro5.chr2A 90260459 31 + 111504155 TCAAGAATACACGTTGTATTAAACCAGGTAA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108514003 31 - 162613886 tcaagaacgcacattgtaatAAACCAGTTAA i panPan2.chr7 N 0 C 0 s gorGor5.CYUI01000341v1 123218 31 + 150013 tcaagaatgcacgttgtaTTAAACCAGGTAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 209407 31 + 1200634 tcaagaatgcacgttgtaaCAAACCAGTTAA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133465100 31 - 185818997 tcaagaatgcacattgtaatAAACCGGTTAA i rheMac8.chr3 N 0 C 0 s macFas5.chr3 67294779 31 + 192294377 tcaagaatgcacattgtaatAAACCGGTTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2776694 31 + 3123512 tcaagaatgcacattgtaatAAACCGGTTAA i macNem1.NW_012011522v1 N 0 C 0 s cerAty1.NW_012000909v1 2497282 31 + 10077455 tcaagaatgcacattgtaatAAACCGGTTAA i cerAty1.NW_012000909v1 N 0 C 0 s chlSab2.chr21 5703329 31 + 127223203 tcaagaatgcacattgtaatAAACCGGTTAA i chlSab2.chr21 N 0 C 0 s manLeu1.NW_012105809v1 1163543 31 - 1799296 tcaagaatgcacattgtaatAAACCGGTTAA i manLeu1.NW_012105809v1 N 0 C 0 s colAng1.NW_012115910v1 1746191 31 + 6934359 tcaagaatgcacattgtaatAAACCAGCTAA i colAng1.NW_012115910v1 N 0 C 0 s calJac3.chr8 108106213 31 - 128169293 tcaagaatgcacattgtaatAAACCAGTTAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 723855 31 - 18371965 tcaagaatacacattgtaatcaaccagttaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1383728 31 + 3566421 tcaagcatgcacattgtaatAAACCAGTTAC i cebCap1.NW_016107540v1 N 0 C 0 s aotNan1.NW_018514471v1 1885569 31 - 9267652 tcaagaatgcacattgtaataaaccagctaa i aotNan1.NW_018514471v1 N 0 C 0 a score=5001282.000000 s hg38.chrUn_KI270746v1 35 520 + 66486 AACATAACCAGACCAGA-TTTTGTAAATGGACTCTCTTAAAGTTTTTATAATTTATATTCATATTTcacatatgttgaaagtaaataatggaaaagcatgcaatgcaaatattaaccaaaatatagctttagttgtacttatatTCACTTTTTAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAACGGAGGCAACCTGTGCAGTTATAACTAGTATTATATTATGCTCTTGGTCTGATTACAGAAGGGAAAGGGGCGATCATACCAGACAATGGCAGAATGAAGCAACAAGGAGTAGAGTTACAGAATATgatgctgtaactggaactggagttactcttttagagttaaagaatagtaaactgaacaaaatatatgaaaca-ttgttttgaagtactgaacatcagacagcacaggactgtgctctgcaagagaagagaaGGAGCAAGAATGAGTCCTGCTTTATTCCCAGATTCTCCGTGACAGCAGT--------------AGAGAGGAATCCCAGAGAGAGC s panTro5.chr2A 90260490 520 + 111504155 AATATAACCAGACCAGA-TTTTTTAAACGGACTCTCTTAAAGTTTTTATAATTTATATTCATATTTcacatatgttgaaagtaaataatggaaaagcatgtaatgcaaatactaaccaaaatatagctttagttgtacttatatTCACATTTTAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAACGGAGGCAAGCTGTGCAGTTTTAACTAGTATTATATTATGCTCTTGGCCTGATTACAGAAGGGAAACGGGAGATCATACCAGACAATGGCAGAATGAAGCAACAAGGAGTAGAGTTACAGAAcatgatgctgtaactgggactggagttacacttttagagttaaagaatagtaaacaggacaaaatatatgaaaca-tttttttgaagtactgaacatcaggcagcgcaggactgtgctctgcaagagaagagaaggagccagaatgagtcctgcattattcccagattCTCCGTGACAGCAGT--------------AGAGAGGAATCCCAGAGACAGC i panTro5.chr2A C 0 C 0 s panPan2.chr7 108514034 516 - 162613886 AACATGATCAGACCAGATTTTTTTAAATGGACTCTTTCAAAGATTTTATAATTT------ATATTTCGCatatgttgaaagtaaacaatggaaaagcatgcaatgcaaatattaaccaaaacatagctttagttgtacttatatTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAACGGAGGCAAGCTGTGCAGTTATAACTAGTATTATATTATGCTCTTGGCCTGATTACAGAAGGGAAAGGGGCGATCATACCAGACAATGGCAGAATGAAGAAACAAGGAGTAGAGTTACAGAAcatgatgctataactgggaccggagttactcttttagagttaaagaatagtaaactggacaaaatatatgaaacattttttttgaaatactgaacatcaggcagcacaggactatgttctgcaagagaagagaaGGAGTCAGAATGAGTCCTGCTTTCTTCCCAGGTTTTCCGTGACAGCAAT--------------ACAGAGGAATCCCAGAGAGAGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 123249 518 + 150013 AACATAACCAGA-CAGA-TTTTTTAAATGGACTCTCTTAAAGTTTTTATAATTTATATTCATATTTcacatatgttgaaagtaaataatggaaaagcatgcaatgcaaatattaaccaaaatatagctttagttgtacttatatTCACATTTTAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAACGGAGGCAAACTGTGCAGTTATAACTAGTATTATATTATGCTCTTGGCCTGATTACAGAAGGGAAAGGGGCGATCATACCAGACAATGGCAGAATGAAGCAACAAGGAGTAGAGTTACAGAAcatgatgctgtaactgggactggagttactcttttagagttaaagaatagtaaactggacaaaatatatgaaac--tttttttgaagtactgaacatcaggcagcacaggactgtgctctgcaagagaagagaaGGAGCCAGAATGAGTCCTGCTTTATTCCCAGATTCTCCGTGACAGCAGT--------------AGAGAGGAATCCCAGAGAGAGC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 209438 513 + 1200634 AACATAATCAGACCAGATTTTTTTAAATGGACTCTCTTAAAGTTTTTATAATTT------ATATTTCACATATGTTGAAAGTAAATAATGGAAAAGCATGCAATGCAAATATTAACCAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAACGGAGGCAAGCTGTGCAGTTATAACTAGTATTATATTATGCTCTTGGCCTGATTACAGAAGGGAAAGGGGCGATCATACCAGACAATGGCAGAATGAAGCAACAAGGAGTAGAGTTACAGAGcatgatgctgtaactgggactggagttactcttttagagttaaagaatagtaaactggacaaagtatatgaaa---tttttttgaagtactgaacatcaggcagcacaggactgtgctctgcaagagaagagaaggagccagagtgtgtcctgctttattcccaggttctccgtgacagcagt--------------agagaggaatcttagagagagc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133465131 520 - 185818997 AACATAATCAGACCAGATTTTTAAAAATGGACTCTCTTAAAGATTGTGTAATTTATATTTATATTTCACATATGTTGAAAGTAAATAATGGAAAAGCATGCAATGCAAATATTATCCAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTTTCAGTGATTTTTTTACACAAAGGAGGCAAGCTGTGCAGCTATAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGCGATCATACGAGACAGTGGCAGAATGAAGAAACAAAGAGTAGAGTTACAGAACATGATGCTTtaactggtgctggagttactcttttagatttaaagaatagtaaactggaaaaaatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggttctccgtgacagcagt--------------agagaggtatcccagagagagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67294810 520 + 192294377 AACATAATCAGACCAGATTTTTAAAAATGGACTCTCTTAAAGATTGTGTAATTTATATTTATATTTCACATATGTTGAAAGTAAATAATGGAAAAGCATGCAATGCAAATATTATTCAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAGCTGTGCAGCTATAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGCGATCATACGAGACAGTGGCAGAATGAAGAAACAAAGAGTAGAGTTACAGAACATGATGTTTtaactggtgctggagttactcttttagatttaaagaatagtaaactggaaaaaatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggttctccgtgacagcagt--------------agagaggtatcccagagagagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2776725 520 + 3123512 AACATAATCAGACCAGATTTTTAAAAATGGACTCTCTTAAAGATTGTGTAATTTATATTTATATTTCACATATGTTGAAAGTAAATAATGGAAAAGCATGCAATGCAAATATTATCCAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAGCTGTGCAGCTATAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGCGATCATACGAGACAGTGGCAGAATGAAGAAACAAAGAGTAGAGTTACAGAACATGATGCTTtaactggtgctggagttactcttttagatttaaagaatagtaaactggaaaaaatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctGCTTTCTTCCCAGGTTCTCCGTGACAGCAGT--------------AGAGAGGTATCCCAGAGAGAGC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2497313 501 + 10077455 AACATAATCAGACCAGATTTTTAAAAATGGACTCTCTTAAAGATTGTGTAATTTATATTTATATTTCACATATGTTGAAAGTAAATAATGGAAAAGCATGCAATGCAAATATTATCCAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAGCTGTGCAGCTATAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGCGATCATATGAGACAGTGGCAGAATGAAGAAACAAGGAGTAGAATTACAGAACATGATGCTTTAACTGGGGC-------------------TTAAAGAATAGTAAACTGgaaaaaatatatgaaac--attttttgaagtactgaacatcaggcagcataggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggttctccgtgacagcagt--------------agagaggtatcccagagagagc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5703360 524 + 127223203 AACATAATCAGACCAGATTTTAAAAAATGAACTCTCTTAAAGATTTTGTAATTTATATTTATATTTcacatatgttgaaagtaaataatggaaaagcatgcaatgcaaatattaaccaaaatatagctttagttatacttatatTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAGCTGTGCAGCTATAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGTGATCATACAAGACAGTGGCAGAATGAAGAAACAAGGAGTAGAGTTACAGAACATGATGCTTtaactggggctggagttactcttttagatttaaagaatagtaaactggaaacaatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggttctccgtgacagcagtag----------agagagaggtatcccagagagagc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1163574 520 - 1799296 AACATAATCAGACCAGATTTTTAAAAATGGATTCTCTTAAAGATTGTGTAATTTATATTTATATTTCACATATATTGAAAGTAAATAATGGAAAAGCATGCAATGCAAATATTATCCAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACTGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAACTGTGCAGCTGTAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGCGATCATACGAGACAGTGGCAGAATGAAGACACAAGGAGTAGAGTTACAGAACATGATGCTTtaactggggctggagttactcttttagatttaaagaatagtaaactggaaaaaatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggttctccgtgacagcagt--------------agagaggtatcccagagagagc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1746222 520 + 6934359 AACATAATCAGACCAGATTTTTAAAAATGGACTCTCTTAAAGATTTTGTAATTTATGTTTATATTTCACATATGTTGAAAGTAAATAATGGAAAAGCATGCAGCGCAAATATTAACCAAAATGTAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAGTTGTGCAGCTATAACTGTTAATATATTATGCTGTTGACCTGATTACAGAAGGGAAAGGGGCGATCATACGAGACAGTGTCAGAATGAAGAAACAAGGAGTAGAGTTACAGAACGTGATGCTTtaactggggctggagttactcttttagatttaaagaatagtaaactggaaaacatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggttcaccgtgacagcagt--------------agagaggtatcccagagagagc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108106244 496 - 128169293 AAGATAATCAGACCAGATTTTTAAAAATTAACTCTCTTAAAGATTCTATAATTTATATTTATATTTcacatgggtttaaagtaaataatggaaatgcatacaatgcaaacattaaccaaaatatagctttagttgtacctatattcacatTTTAA---------------AAGTTTCAGTGATTCTTTTACACAATAGAGTCAAGCTGTTCAGCTATAACTAGTATTATATTATGCTCT---CCTGATTACAGAAGGG-AAAGGGTGATCACACAAGACAG------AATGAAGAAACAAAGAGAAGAGTTACAGAAcatgatgctgtaactgggactggagttactctttaagatttaaagaatagtaaactggacaaaatatattaaaca-aatttttaaagtactgaacatcaggcagcacaggactgtgctctgcaagagaagagaaaaagccagaatgagtcctgctttcttcccaggttccccatggaagtagt--------------agagaggaatcccagagagagc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 723886 493 - 18371965 aagaTAATTGGACCAGATTTTCAAAAATTAACTCTCTTAAAGATTTTATA------ATTTCTATTTcacagaggttgaaagtaaataatggaaatgcatacaatgcaaacattaaccaaaatatagctttagttgtacctatattcacatTTTAA---------------AAGTCTTAGTGATTTTTTTACACAATGGAGTCAAGCTGTGCAGCCATAACTAGTATTATATTATGCTCTCTGCCTGATTACAGACGGG-AAAGGACGATCACACGAGACGG------AATGAAGAAACAAAGAGAAGAGTTACAGAAcatgatgctgtaactgagactggagttactcttttagacttaaagaatagtaaactggacaaaatatattaaaca-aatttttaaagtaccgaacatcaggcagcacaggactgtgctctgcaggagaagagaaaaagccagaatgagtcctgctttcttcccgggttctccctgacagtagt--------------agagaggaatcccagagagggc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1383759 492 + 3566421 AAGATAATCAGACCAGATTTTTTTAAATTAA--CTCTTAAAGATTTTATAATTTCTATTTATATTTcacataggttgaaagtaaataatggaaatacatacaatgtaaacattaaccaaaatatagctttagttgtacctatattcacatTTTAC---------------AAGTCTCAGTGATTTTTTTACACAATGGAGTCAAGCTGTGCAGCTGTAGCTAGTATTATATTATGCTCTCTGCCTGATTACAGAAGGGAAAAGGGCGATCACACAAGACAG-------TTGAAGAAACA-----AAGAGTTACAGAAcacgatgctgtagctgggactggagttactgttttagatttaaagaatagtaaactggacaaaatatattaaaca-aatttttaaagtactgaacatcaggcagcacaggactgtgctctgcaagagaagagaaaaagccagaatgagtcctgctttcttcccaggttctccatgagagtagt--------------agagaggattcccagagagagc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1885600 500 - 9267652 aagaTAATCAGACCAGATTTTTTAAAATTGACTCTCTTAAAGATTTTGTAATTTATATTTATATTTcacataggttgaaagtaaataatgaaaatgcatacaatgcaaacattaaccaaaatatagctttagttgtacctatattcacatTTTAA---------------AAGTCTCAGTGATTTTTTTACACAATGGAGTCAAGCTGTGCAGCTATAACTAGTATTATATTATGCTCTCTGCCTGATTACAGAAAGGAAAGGGGCGATCACACAAGACAG------AATGAAGAAACAAAGAGAAGAGTTACAGAAcatgatgctgtaactgggcctggagttactcttttagatttaaagaatagtaaactagacaaaatatattaaaca-aatttttaaagtactgaacatcaggcagcacaggactctgctctgcaagagaagagaaaaagccagaatgagtcctgctttcttcccaggttctccatgagagTAGT--------------AGAGAGGAATCCCAGAGACAGC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12736368 496 + 14340318 AACATAAT-AAACCAGATTTCTACTAATGGACTCCCTTAAAGGTTTTATAATTTATATTTGTATCTTATGTATATTAAAAGTAAATTATGGGAAAGCACTAAATGCAAACATTGACCAAAACAGAGCTTCGGTTGCA-GTATATTAACATTTCAAAGGTTAGACACAGTCTAGGCTCAGTCATG-TCTCACACAGCAGGAGC-CGCTGTGCCGCT-------TTGCTGCGTGATGCTCTTTGGCTGAGTACATAAAAT-AACGATAAAACGCAGGACATATCTGCAGGACGAATCAAACAGGAACAGAGTC-CGGAATGTgatgtagtaactgggagtggagtgactcttt-agagcaagaatatagaaaatcagacaaaatacacgaaaca-agtgtttgacgtattga------------------------tctctgagagcagaaaaagggccaagatgagtcctacttccct-ccagatgccatatgggcactatcaaccaaggtctagagcaaagaatcgcagagagacc i otoGar3.GL873564 N 0 C 0 a score=13923.000000 s hg38.chrUn_KI270746v1 555 1 + 66486 A s panTro5.chr2A 90261010 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr7 108514550 1 - 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 123767 1 + 150013 A i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 209951 1 + 1200634 a i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133465651 1 - 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67295330 1 + 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777245 1 + 3123512 A i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2497814 1 + 10077455 a i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5703884 1 + 127223203 a i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1164094 1 - 1799296 a i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1746742 1 + 6934359 a i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108106740 1 - 128169293 a i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 724379 1 - 18371965 a i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1384251 1 + 3566421 a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886100 1 - 9267652 A i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 1017736 1 - 1121937 a i tarSyr2.KE946558v1 N 0 N 0 s otoGar3.GL873564 12736864 1 + 14340318 a i otoGar3.GL873564 C 0 I 1 a score=274586.000000 s hg38.chrUn_KI270746v1 556 28 + 66486 GA-CATTGTCATTGCACTGAGGAACCAGA s panTro5.chr2A 90261011 28 + 111504155 GA-CATTGTCATTGCACTGAGGAACCAGA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108514551 28 - 162613886 GA-CATTGTCATTGCATTGAGGAACCAGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 123768 28 + 150013 GA-CATTGTCATTGCACTGAGGAACCAGA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 209952 28 + 1200634 ga-cattgccattgcatcgaggaaccaga i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133465652 29 - 185818997 gagcattgtcattgcattgaggaaccaga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67295331 29 + 192294377 gagcattgtcattgcattgaggaaccaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777246 29 + 3123512 GAGCATTGTCATTGCATTGAGGAACCAGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2497815 29 + 10077455 gagcattgtcattacattgaggaaccaga i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5703885 29 + 127223203 gagcattgttattgcattgaggaaccaga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1164095 29 - 1799296 gagcattgtcattgcattgaggaaccaga i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1746743 29 + 6934359 gagcattgtcattgcattgaggaaccaga i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108106741 29 - 128169293 tggcattgtcattgtattgaggaaacaga i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 724380 29 - 18371965 tggcattgtcattgtattgaggaaacaga i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1384252 29 + 3566421 tgtcattgtcattgtattgaggaaacaga i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886101 29 - 9267652 TGGCATTGCCATTGTATTGAGGAAACAGA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12736866 28 + 14340318 -ggcaatgtcactgcattgagaacacaga i otoGar3.GL873564 I 1 I 258 a score=480634.000000 s hg38.chrUn_KI270746v1 584 51 + 66486 T-AAAAATCAAAAAA----------------------------GG-TTAAGCAGCTGGAATGTGTAG-----TAGAAGAGAACCTT s panTro5.chr2A 90261039 51 + 111504155 T-AAAAATCAAAAAA----------------------------GG-TTAAGTAGCTGGAATGTGTAG-----TAGAAGAGAACGTT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108514579 48 - 162613886 T-AAAAATCAAAAAA----------------------------GG-TTAAGCAGCCAGAATTT---G-----TAGAAGAGAGCATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 123796 51 + 150013 T-AAAAATCAAAAAA----------------------------GG-TTAAGCAGCTGGAATGTGTAG-----TAGAAGAGAACGTT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 209980 51 + 1200634 t-aaaaatcaaaaaa----------------------------gg-ttaagcagctggaatgtgtag-----tagaagagaacgtt i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133465681 51 - 185818997 t-aaaaatcaaaaaa----------------------------gt-ttaagcagctggaatttgtag-----TAGAAGAGAACGTT i rheMac8.chr3 C 0 I 1 s macFas5.chr3 67295360 51 + 192294377 t-aaaaatcaaaaaa----------------------------gt-ttaagcagctggaatttgtag-----tagaagagaacgtt i macFas5.chr3 C 0 I 1 s macNem1.NW_012011522v1 2777275 51 + 3123512 T-AAAAATCAAAAAA----------------------------GT-TTAAGCAGCTGGAATTTGTAG-----TAGAAGAGAACGTT i macNem1.NW_012011522v1 C 0 I 1 s cerAty1.NW_012000909v1 2497844 51 + 10077455 t-aaaaatcaaaaaa----------------------------gt-ttaagcagctggaatttgtag-----TAGAAGAGAACGTT i cerAty1.NW_012000909v1 C 0 I 1 s chlSab2.chr21 5703914 51 + 127223203 t-aaaaatcaaaaaa----------------------------gt-ttaagcagctggaatttgtag-----tagaagagaacatt i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012105809v1 1164124 51 - 1799296 t-aaaaatcaaaaaa----------------------------gt-ttaagaagctggaatttgtag-----TAGAAGAGAACGTT i manLeu1.NW_012105809v1 C 0 I 1 s colAng1.NW_012115910v1 1746772 51 + 6934359 t-aaaaatcaaaaaa----------------------------gg-ttaagcagctggaatttgtag-----tagaagagaatgtt i colAng1.NW_012115910v1 C 0 I 1 s calJac3.chr8 108106770 52 - 128169293 tcaaaaatcagtaaa----------------------------gg-ttaagcagctggagtttgtag-----tagaagagaaagtt i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 724409 52 - 18371965 tcaaaaatcaaaaaa----------------------------gg-ttaagcagctggaatttgtag-----tagaagagaaaggt i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 1384281 51 + 3566421 tcaaaagtcaaaaaa----------------------------ga--taagcagctggaatttgtag-----tagaagagaaagtt i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 1886130 53 - 9267652 TCACAAATCAAAAAA----------------------------AGTTTAAGCAGCTGGAATCTGTAG-----Tagaagagaaagtt i aotNan1.NW_018514471v1 C 0 I 1 s otoGar3.GL873564 12737152 84 + 14340318 t-aaaaaaaaaaaaaagagagagaacccagatcaaagctcaatgg-ttaagcagctggaatttgtagagaaaaaaaagagaaaatt i otoGar3.GL873564 I 258 I 1 a score=4086597.000000 s hg38.chrUn_KI270746v1 635 404 + 66486 TACAGAAAAAGGAACCAAGAATCAGCCTAAGGATTCTCCCAAGTCCCTAAGCCAAATGTACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGACACTACCAGGGAGTTGGAATAA---CACTTCcctggcatcacatgacaggaagacacgttagctctgaccagccagagaagggaatcccctctgtacctccaggatgttcagtaaagaccactggaggttcataccctagtgacagtgcttatttagctccaagttacagatggctctagactaactccacaaagtttaaagagaagatttaaaacaacaacagacaaatactca---tcctgaagttactgaactgcctgccac--------aacattgttcaaaggtagccaataaaatctagatattcaata--gcataacat s panTro5.chr2A 90261090 407 + 111504155 TACAGAAAAAGGAACCAAGAATCAGCCTAAGGATTCTCCCAAGTCCCTAAGCCAAATGTACATAGGATGAAATTCTAAGGAGCTCAGCAAAAGACTCTACCAGGGAGTTGGAAGAAGAACACTTCcctggcatcacatgacaggaagacacgttagctcttaccagccagagatgggaatcccctctgtacctccaggatattcagtaaagaccactggaggttcatgccctagtgacagtgctcatttagctccaaactacagatggctctagactaactcaacaaattttaaagaggagatttaaagcaacaacagaaaaatactca---tcctgaagttactgaactgcctgccac--------aacattgttcaaaggtagccaataaaatctagatattcaata--gcataacac i panTro5.chr2A C 0 C 0 s panPan2.chr7 108514627 407 - 162613886 TACAGAAAAAGAAACCAAGAATCAGCATAAGGTTTCTCCCAAGTCCCTAAGCCAAATGTACATAGGATGAAAATCTAAGGAGCTCAGCAAAGGACTCTACCAGGAATTTGGAAGAAGAACACTTCCCTGGCATCACATGACAGGAAGACATGTTAGCTCTGATCAGCCAGAGAAGGGAATCCCCTCTGAACATCCAGGATATTCAGTAAAGACCACTGGAGTTTCATTCCCTAGTGATAGTGCTCATTTAGCTCCAAATTACAGATGGCTCTAGACTAATTCAACAAAGTTTAAAGAGAAGATTTAAAACAACAACAGAAAAATACTCA---TCCTGAAGTTACTGAACTGCCTGCCAC--------AACATTGTTCAAAGGTAGCTAATAAAATCTAGATATTCAATA--GCATAACAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 123847 406 + 150013 TACAGAAAAAGGAACCAAGAATCAGCCTAAGGATTCTCCCAAGTCCCTAAGCCAAATGTACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGACTCTACCAGGGAGTTGGAAGAAGAACACTTCCCTGGCATCACATGACAGGAAGACACGTTAGCTCTGACAAGCCAGAGAAGGGAATCCCCTCTGTACCTCCAGGATATTCAGTAAAGACCACTGGAGGTTCATGCCCTAGTGACAGTGCTCATTTAGCTCCAA-TTACAGATGGCTCTAGACTAACTCAACAAAGTTTAAAGAGAAGATTTAAAACAACAACAGAAAAATACTCA---TCCTGAAGTTACTGAACTGCCTGCCAC--------AACATTGTTCAAAGGTAGCCAATCAAATCTAGATATTCAATA--GCATAACAC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 210031 407 + 1200634 tacagaaaaaggaaccaagaatcagcacaagatttctcccaagtccctaagccaaatgtacataggatgaaattctaaggagctcagcaaaggactctaccagggagttggaagaagaacacttccctggcatcacatgagaggaagacatgttagctctgaccagcccgagaacggaatcccctctgtacatccaggatattcagtaaagactgctggaggttcatgccctagtgacagtgctcatttagctccaaattacagatggctctagactaactcaacaaagtttaaagagaagatttaaaacaacaacagaaaaatactca---tcctgaagttactgaactgcctgccac--------aacattgttcaaaggtagccaataaaatctagatattcaata--gcgtaacat i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133465733 407 - 185818997 TATAGAAAAATGAACCAGGAATCAACATAAGGTTTCTGCCAAGTCCCCAAGCCAAATATACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGACTCTACCAGGGAGTTGGAAGAAgaacacttccttggcatcacatgacaggaagacatgttagctctgaccagccagagaaggaaatcccctctgaacatccaagatattcagtaaagaccactggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacaggaaaatactca---tcctaaagttactgaactgcctgccac--------aacactgttcaaaggtagccaataaaatccagatattgaata--gcataacat i rheMac8.chr3 I 1 C 0 s macFas5.chr3 67295412 407 + 192294377 tatagaaaaatgaaccaggaatcaacataaggtttctgccaagtccccaagccaaatatacataggatgaaattctaaggatctcagcaaaggactctaccagggagttggaagaagaacacttccttggcatcacatgacaggaagacatgttagctctgaccagccagagaaggaaatcccctctgaacatccaagatattcagtaaagaccacgggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacaggaaaatactca---tcctaaagttactgaactgcctgccac--------aacactgttcaaaggtagccaataaaatccagatattgaata--gcataacat i macFas5.chr3 I 1 C 0 s macNem1.NW_012011522v1 2777327 407 + 3123512 TATAGAAAAATGAACCAGGAATCAACATAAGGTTTCTGCCAAGTCCCCAAGCCAAATATACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGACTCTACCAGGGAGTTGGAAGAAgaacacttccttggcatcacatgacaggaagacatgttagctctgaccagccagagaaggaaatcccctctgaacatccaagatattcagtaaagaccactggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacaggaaaatactca---tcctaaagttactgaactgcctgccac--------aacactgttcaaaggtagccaataaaatccagatattgaata--gcataacat i macNem1.NW_012011522v1 I 1 C 0 s cerAty1.NW_012000909v1 2497896 407 + 10077455 TATAGAAAAATGAACCAGGAATCAACATAAGGTATCTGCCAAGTCCCTAAGCCAAATATACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGACTCTACCAGGGAGTTGGAAGAAgaacacttccttggcatcacatgacaggaagacatgttagctctgaccagccagagaaggaaatccgttctgaacatccaagatattcagtaaagaccactggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacaggaaaatactca---tcctaaagttactgaactgcctgccac--------aacactgttcaaaggtagccaataaaatccagatattgaata--gcataacat i cerAty1.NW_012000909v1 I 1 C 0 s chlSab2.chr21 5703966 407 + 127223203 tatagaaaaatgaaccaggaatcaacataaggtttctgccaagtccttaagccaaatatacataggatgaaattctaaggagctcagcaaaggactctaccagggagttggaagaagaacacttccttggcatcacacgacaggaagacatactagctctgaccagccagagaagggaatcccctctgaacatccaagatattcagtaaagaccactggaggttcatgccctagggatagtgctcatttagctctaaattacagatggctctagaataactcaagaaagtttaaagagaagatttaaaacagcaacaggaaaatattca---tcctaaagttactgaactgcctgccac--------gacactgttcaaaggtagccaataaaatccagatattgaata--gcataacat i chlSab2.chr21 I 1 C 0 s manLeu1.NW_012105809v1 1164176 407 - 1799296 TATAGAAAAATGAATCAGGAATCAACATAAGGTTTCTGCCAAGTCCCTAAGCCAAATATACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGACTCTACCAGGGAGTTGGAAGAAGAACACTTCCTTGGCATCACATGACAGGAAGACATGTTAGCTCTGACCAGCCAGAGAAGGAAATCCCCTCTGAACATCCAAGATATTCAGTAAAGACCACTGGAGGTTCATGCCCTAGTGATAGTGCTCATTTAGCTCTAAATTACAGATGGCTCTAGAATAACTCAACAATGTTTAAAGAGAAGATTTAAAACAGCAACAGGAAAATACTCA---TCCTAAAGTTACTGAACTGCCTGCCAC--------AACACTGTTCAAAGGTAGCCAATATAATCCAGATATTGAATA--GCATAGCAT i manLeu1.NW_012105809v1 I 1 C 0 s colAng1.NW_012115910v1 1746824 407 + 6934359 tacagaaaaatgaacgaggagtcagcataaggtttctcccaagtccctaagccaaatatacataggatgaaattctaaggagctcagcaaaggactctaccagggagttggaagaagaacacttccttggcatcacatgacaggaagacatgttagctctgaccagccagagaagggaatcccctttgaacatccaagatattcaataaagaccactggaagttcatgccctagtgatagtgctcatttagctctaaattacagatggctctagaataactcaacaaagtttaaagagaagatttaaaacagcaacaggaaaatactca---tcctaaagttactgaactgcctgccac--------aacactgttcaaaggtagccaataaaatccaggtattgaata--gcataacat i colAng1.NW_012115910v1 I 1 C 0 s calJac3.chr8 108106823 406 - 128169293 tgcagaaaagggagccaggaatcagcataagatttctcccaagtccctaagtcaaatgtacataggataaaattctaagaagctcagcaaaggactctacaagggagttggaagcagaacacatccctgacatcacacgacaggaagac--gttagctctgaccaaccagagagggcaatcccctctgaacatccaggatattcagtaaagaccaatggaggttcacgccctagtgatagtgctcggttagctctgaattaaagatggatctggacaaactcaacaaagtttaaagagaagatttaaaa---caacagaaaaatactga---tactgaagtcactgaactgcctgccaca----ataaacgctattgagaggtagccagtaaattccagatattcaaca--gcataacat i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 724462 406 - 18371965 tatagaaaagggagccaggtctcagcataagatttctcccaagtcgctaagccaaatgaacataggatgaaattctaaggagctcagcaaaggactctacaggggagctggaagcagaacacatccctggcatcacacgacaggaagat--gttagctctgcccaaccagagaggggaatcccctctgaacttccaggatattcagtaaagaccagtggaggttcacgccctagtgatagtgctcagttagctctgaactaaagatgactctagacaaactcaacaaagtttaaagagaagatttaaaa---caacagaaaaatactga---tcctgaagtcactgaactgcctgccaca----ataaacactattcaaaggtagccaataaattccagatattcaata--gcataacat i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1384333 406 + 3566421 tacagaaaagggaggcaggaatcagcataaggtttctcccaagtccataagccaaatgtacataggatgaaattctaaggagctcagcaaaggactctacaggggagttggaagcagaacacatccctggcgtcacatgacaggaagac--gttatctctgacaaaccagagaggggaatcccctctgaacatccaggatattcagtaaagaccaatggaggttcatgccctagtgataatgctcagttagctctgaattaaagatggctctaggcaaactcaacaaagtttaaagagaagatttaaaa---caacagaaaaatactga---tcctgaaatcactgaactgcctgccaca----acaaacattgttcaaaggtagccaataaattccagatattcaata--gcataacat i cebCap1.NW_016107540v1 I 1 C 0 s aotNan1.NW_018514471v1 1886184 406 - 9267652 tacagaaaagggagccaggaatcagcataaggtttctcccaagtccctaagccaaatgtacataggatgaaattctaaggagctcagcaaaggactctacaagggagttggaagcagaacacatccctggcatcacacgacaggaagac--gttagctctgaccaaccagagaggggaatcccctccaaacatccaggatattcagtaaagaccaatggaggttcatgccctggtgataatgctcagttagctatgaattaaagatggctctagactaactcaacaaagtttaaacagaagatttaaaa---caacagaaaaatactga---tcctgaagtcactgaactgcctgccaca----ataaacactattcaaaggtagccaataaattccagatattcaata--ccataacat i aotNan1.NW_018514471v1 I 1 C 0 s otoGar3.GL873564 12737237 397 + 14340318 tacagatgaaggagccagggaccagcagaagttttctcccgggtcctc-tgccacgtgggcataggaagaaattccatgaagctcagaaagggcacctaccaaGGAGTGGCAAGGCAGACGCG-CCCGGATGGCACACGGCCGG-AGGCACACTGGCTCTGTCCAGCCGGAGTGGGGAGCCCTCACTGCAC-CCCAGGA--CTCAGCAGAGA-----------------CCTGGAGACAGGGCTCAAGCAGCCCTGAATTACAGATGGGTCTAGAGCAGCCCGGAGACGTTTGGAGAGGAGCCTTATGACAACAACGCAGAAACAGAAAAGCTCCTCACGCCCCTGAGCTGCGCGCCAGAGGAGACGAACGCTGTCCAAAGGTGGCCAGTAAAATCCAGATGTTTCGTACTGTGTGACAT i otoGar3.GL873564 I 1 I 436 a score=1344771.000000 s hg38.chrUn_KI270746v1 1039 161 + 66486 caaaataccc--ccc-caaaaaaactctgacatgcaaagaagccgtaagatatatataattaagatatatattaacaggataaaaa-taagtcatttataaatgacAGAAAAGAAGGAAATTTCAAGGTCCTtaaagtaa-atatattttataaatacat--------------------------------------------atagat s panTro5.chr2A 90261497 163 + 111504155 caaaatacccgcccc-caaaaaaactctgacatgcaaagaagccgtaagatatatataattaagatatatattaacaggataaaaa-taaatcatttataaatgacAGAAAAGAAGGAAATTTCAAGGTCCTTAAAGtaa-atatattttataaatacat--------------------------------------------atagat i panTro5.chr2A C 0 C 0 s panPan2.chr7 108515034 161 - 162613886 CAAAATACC---CCC-CAAAAAAACTCTGACATGCGAAGAAGCCGGAAGATATATATTATTAAGATATATATTAACAGGATAAATA-TAAGTCATTTATAAATGACACAGAAGAAAGAATTTTCAAGGTCCTTAAGGTAatatatattttataaatacat--------------------------------------------atagat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 124253 158 + 150013 CAAAATAC----CCC-CCAAAAAACTCTGACATGCAAAGAAGCCGTAAGATATATATAATTAAGATATATATTAACAGGATAAAAA-TAAGTCATTTATAAATGACAGA-AAGAAGGAAATTTCAAGGTCCTTAAAGtaa-atatattttataaatacat--------------------------------------------atagat i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 210438 157 + 1200634 caaaatac----ctc-aaaaaaaactccgacatgcaaagaagctggaagatatATATTATTAAGATATATATTAACAGGATAAAAA-TAAGTCATTTATAAATGATAGAGAAGAAGGAATTTTCAAGGTCCTTAAAGTAA-ATATATTTTATAAATAAAT--------------------------------------------ACAA-- i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133466140 157 - 185818997 caaaatac----ccc----aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaa-taggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaagatat--------------------------------------------atagat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67295819 157 + 192294377 caaaatac----ccc----aaaatttctgacatgcaaagaagcaggaagatatATATTATTAAGATATATATTAACAGGATAAAAA-TAGGTCATTTATAAATGACAGAGAAGAAGGAATTTTCAAGGTCCTTAAAGTAatatatattttataaagatat--------------------------------------------atagat i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777734 157 + 3123512 caaaatac----ccc----aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaa-taggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaagatat--------------------------------------------acagat i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498303 157 + 10077455 caaaatac----ccc----aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaa-taggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaagatat--------------------------------------------atagat i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704373 157 + 127223203 caaaatac----ccc----aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaa-taggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaagatat--------------------------------------------atagat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1164583 157 - 1799296 CAAAATAC----CCC----AAAATTTCTGACATGCAAAGAAGCAGGAAGACATATATTATTAAGATATATATTAACAGGATAAAAA-TAGGTCATTTATAAATGACAGAAAGGAAGGAATTTTCAAGGTCCTTAAAGTAatatatatttcataaagatat--------------------------------------------atagat i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747231 157 + 6934359 caaaatac----ccc----aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaa-taagtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaagacat--------------------------------------------atagat i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108107229 172 - 128169293 caaaatta----cccccaacaaaaccctgatatgcaaagaaacaggaagatatGTATTATTAAGATATAGGTTAACAGGAAAAAAAGTAAGTCATTTATAAATGACAGAGAAGAAGGAATTTTCAAGGTCCTTAAAGTAATATGTATTTTataaacacac----------------------------------acacacacacgtacat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 724868 204 - 18371965 caaagtag----cccccaacaaaaccctggcatgcaaagaaacagaaagatatgtattattaatatatgtattaacaggagaaaa--taagtcatttataaatgacagagaaGAAGGAATTTTCAAGGTCCTTAAAGTAATATATATCTTATAGacacacacacacacacacacacacacatacacacacatatacacacacacacacat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1384739 187 + 3566421 caaagtac----cccccaacaaaaccctgacatgcaaagaaacaggaagatatatattattaagatatatatgaacaggagaaaaa-taaatcatttataaatgacagagaagagggaattttcaaggtccttaaagtaatatatattttataaatacacacacacacacacacac------------------acacacacacatatat i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886590 177 - 9267652 caaagtac----catgcaacaaaaccctgacatgcaaagaaacaggaagatatatattattaagatatatattaacaggagaaaaa-taagtcatttataaatgacagagaaGAAGGAATTTTCAAGGTCCGTAAAGTAatatatatttcataaatacacacacac----------------------------gtatatatatatatga i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12737634 436 + 14340318 I a score=868575.000000 s hg38.chrUn_KI270746v1 1200 101 + 66486 ------------------aaatac------------atatataCGTCAA------------GGTACTTAAATGAAAATTGAACATaggagaaaaatataagttataaaatg-aaaaatgtgacatgcatagatgaaaaataaat s panTro5.chr2A 90261660 101 + 111504155 ------------------aaatac------------acatatatGTCAA------------GGTACTTAAATGAAAATTGAACATAGGAGAAAAATAGAAGTTATAAAATG-AAAAATATGACATGTATAGATGAAAAATAAAT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108515195 100 - 162613886 ------------------aaatac------------atatatatGTCAA------------ATTACTTAAATGAAAATTGAACATAGGAGAAAAATAGAAGTTATGAAATG--AAAATGTGACATGTATAGATGAAAAATGAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 124411 101 + 150013 ------------------aaatac------------atatatatGTCAA------------GGTACTTAAATGAAAATTGAACATAGGAGAAAAATAGAAGTTATAAAATG-AAAAATGTGACATGTATAGATGAAAAATAAAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 210595 89 + 1200634 ----------------------------------------ATATGTCAA------------ATTACTTAAATGAAAATTGAACCCTGGAGAAAAAT---AGTTACAAAATGAAAAAATGTGACATGTATAGATGAAAAATAAAT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133466297 97 - 185818997 ------------------aaatat----------------atatgtcaa------------attacttaaatgaaaattgaacataggagaaaaatagaagttataaaatg-aaaagtgtgacatgtatagatgaaaaataaat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67295976 97 + 192294377 ------------------aaatat----------------atatGTCAA------------ATTACTTAAATGAAAATTGAACATaggagaaaaatagaagttataaaatg-aaaagtgtgacatgtatagatgaaaaataaat i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777891 97 + 3123512 ------------------aaatat----------------atatgtcaa------------attacttaaatgaaaattgagcataggagaaaaatagaagttataaaatg-aaaagtgtgacatgtatagatgaaaaataaat i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498460 97 + 10077455 ------------------aaatat----------------atatgtcaa------------attacttaaatgaaaattgaacataggagaaaaatagaagttataaaatg-aaaagtgtgacatgtatagatgaaaaataaat i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704530 97 + 127223203 ------------------aaatat----------------atatgtcaa------------attacttaaatgaaagttgaacataggagaaaaatagaagttataaaatg-aaaagtgtgacatgtatagatgaaaaataaat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1164740 97 - 1799296 ------------------aaatat----------------atatGTCAA------------ATTACTTAAATGAAAATTGAACATAGGagaaaaatagaagttataaaatg-aaaagtgtgacatgtatagatgaaaaataaat i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747388 94 + 6934359 ------------------aaatac----------------atatgtcaa------------attgcttaaatgaaaattgaacat---agaaaaatagaagttataaaatg-aaaagtgtgacatgtatagatgaaaaataaat i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108107401 94 - 128169293 ------------------aaatac------------atatatgtatCAA------------ATTTCTTAAATGAAAACTGAACATAGGGAAAAAATAGAAGTTAC--------AAAATGTCACATGTATAGATGAACAATAAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 725072 108 - 18371965 ------------------atacaT------------ATATATATATAAACATAACGATGTCAATTTTTAAATGAAAATTGAACATAGGGAAAAAATAGAAGTTATA------AAAAATGTGACATGTATAGATGAACAATAAAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1384926 94 + 3566421 ------------------aaatac------------atatatatgtcaa------------atttcttaaatgaaaattgaacac--ggaaaaaatagaagttata------aaaaatgtgacacatatagatgaataataaat i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886767 96 - 9267652 ------------------aaatac------------atatatatGTCAG------------ATTTCTTAAATGAAAATTGAACATAGGGAAAAAATAGAAGTTATA------AAAAATGTGACATGTATAGATGAACAATAAAT i aotNan1.NW_018514471v1 C 0 I 128 s otoGar3.GL873564 12738070 128 + 14340318 gaaaagaaagattttttaagatatttaatgtaaaatatatgtgtgttaa------------agtacttaagtaaaaaataaacat--gagaaaaatagaaattataaaat--aaaaatgtaacatgtatagatgaataacaaat i otoGar3.GL873564 I 436 C 0 a score=2038700.000000 s hg38.chrUn_KI270746v1 1301 229 + 66486 atttgaaataaaaattccatgagatagaataagtaatggatt------ttaccctaacatcagaaaatttatag--aaaaaaaatagaagctttgcaaactaaaggacaaagggtaaactaaaataagaaagccagaaactcactgatacgtcagacaatatgcagcagtgtaacatacatgtaattaacatctcaaaaaggatgggtgg--gggaattataggtgaataaagaatGGT s panTro5.chr2A 90261761 228 + 111504155 ATTTTAAATAAAAATTCCATGAGATAGAATAAGTAATGGATT------TTACCCTAACATCAGAAAATTTATAG--AAAAAAA-TAGAAGCTTTACAAACTAAAGGACAAAGGGTAAACTAAAATAAGAAAGCCAGAAACTCACTGATACATCAGACAATATGCAGCAGTGTAACATACATGTAATTAATATCTCAAAAAGGATGGGTGG--GGGAATTACAGGTGAATAAAGAATGGT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108515295 229 - 162613886 ATTTGAAATAAAAATTCCATGAGATAGAATAAGTAATGGATA------TTACCCTAACATCAGAAAATTTATAG--AAAAAAAATAGAAGCTTTACAAACTGAAGGACAAAGGCTAAACTAAAATAAGAAAGCCAGAAACTCACTAATACGTGAGACAATATGCGGCAGTGTAACATACATGTAGTTGATATCTCAAAAAGGATGGGTGG--GGGACTTATAGTTGAATAAAGAATGGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 124512 226 + 150013 ATTTGAAATAAAAATTCCATGAGATAGAATAAGTAATGGATT------TTACCCTAACATCAGAAAATTTATAG--AAAAAA--TAGAAGCTTTACAAACTAAAGGACAAAGGGTAAACTAAAATAAGAAAGCCAGAAACTCACTGATACATCAGACAATATGCAGCAGTGTAACATACATGTAATTAATATCTCAAAAAGGATGGGT-G--GGGAATTATAGGTGAATAAAGAATGGT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 210684 221 + 1200634 ATTTGAAATAAAAATTCTATGAGATAGAATAAGTAATCGATT------TTACCCTAACATCAGAAAATTTATAG--AAAAAAA-TAGAAGCTTTACAAACTAAAGGACAAAGGGTAAACTA-------AAAGCCAGAAActcactgacatgtgagacaatatgcagcagtgtaacatacatgtaattaatatctcagaaagGATGGGTGG--GGGAATTATAGTTGAATAAAGAATGGT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133466394 228 - 185818997 atttgaaataaaaattccatgagatacaataagtaatggatt------ttaccctaacatcagaagatttatag--acaaaaa-tagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggTGGGTGG--GGGAATTACAGTTGAATAAagaatggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296073 228 + 192294377 atttgaaataaaaattccatgagatacaataagtaatggatt------ttaccctaacatcagaagatttatag--acaaaaa-tagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggTGGGTGG--GGGAATTACAGTTGAATAAagaatggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777988 228 + 3123512 atttgaaataaaaattccatgagatacaataagtaatggatt------ttaccctaacatcagaagatttatag--acaaaaa-tagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggtggGTGG--GGGAATTACAGTTGAATAAagaatggg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498557 228 + 10077455 atttgaaataaaaattccatgagatacaataagtaatggatt------ttaccctaacatcagaagatttatag--acagaaa-tagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggtggGTGG--GGGAATTACAGTTGAATAAagaatggg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704627 228 + 127223203 atttgaaataaaaattccatgagatacaataagtaatggatt------ttaccctaacatcagaagatttatag--acaaaaa-tagaagctttacaaactgaaggacaaaggggaaactaaaataagaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaattggtatctcaaaaagggtggGTGG--GGGAATTACAGTTGAATAAagaatggg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1164837 228 - 1799296 atttgaaataaaaattccatgagctaaaataagtagtggatt------ttaccctaacatcagaagatttatag--acaaaaa-tagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggTGGGTGG--GGGAATTATAGTTGAATAAagaatggg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747482 228 + 6934359 ctttgaaatgaaaattccgtgagatataataagtaatggatt------ttaccctaacatcagaagatttatag--acaaaaa-tagaagctttacaaactgaaggacaaaggaggaactaaaataagaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggtggGTGG--GGGAATTATAGTTGAATAAagaatggg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108107495 228 - 128169293 GTTTAAAATAAAAATTCCAAGAGACAGAATGAGTAATGAATT------TTACCCTAACATCAGAAAATGTACAG--ACAAAaa-tagaagctttacaaactgaaggacaaaggggaaactaaaataggaaagccagaaactcactgatccatgagacaatatgcagccatgtaacatacgtgtaattggtatctcaaaaagGATGTGTGG--GGGAATTACAGTTGAATAACTAATAGT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 725180 228 - 18371965 GTTTAAAATAAAAATTCCACAAGACAGAATAAGTAACGAATT------TTGCCCTAACATCTGAAAGTttacag--acaaaaa-tagaagctttacaaactgaaggacaaaggggaaactaaaataggaaagccagaagctcactgatccaggagccagcatgcagccctgtaacatacgtgtcattggtatctcagaaagGATGGGTGT--GGGAATTACAGTTGAATAAATaatagt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385020 228 + 3566421 gtttaaaataaaaattccatgagacagaataagtaatggatt------ttaccctaacatcagaaaatttacag--acaaaaa-tagaagctttacaaactgaaggacaaaggggaaactaaaataggaaagccagaaactcactgatccatgagacgatatgcagccatgtaacatacgtgtaattggtatctcaaaaaggatgggtgg--gggaaTTATAGTTGAATAAATAATAGT i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12738198 228 + 14340318 atttgaaataaaaatcctactagatgggattagtaatggattacatactaatccaaagatcagagaccctgaagatatagaaa-taggaa-tgcacaaactgaaggagaaggg---aaataaaataaaac------aaactcattgatctatctgccaataccgagcaacgtaccatgtgtataattgacatcccagaaaagatgagaggaagaaaaatataattgaatgagtaagagt i otoGar3.GL873564 C 0 I 3724 e aotNan1.NW_018514471v1 1886863 128 - 9267652 I a score=81014.000000 s hg38.chrUn_KI270746v1 1530 42 + 66486 ACACTCATTCCTGAGGGCACCGAGGAGGGAGGATAGCTTTAG s panTro5.chr2A 90261989 42 + 111504155 ACACTCATTCCTGAGGGCACCGAGGAGGGAGGATAGATTTAG i panTro5.chr2A C 0 C 0 s panPan2.chr7 108515524 42 - 162613886 ACACTCATTCCTAAGGGCACCGAGGAGGGAGGATAGCTTAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 124738 41 + 150013 ACACTCATTCCTGAGGGCA-CGAGGAGGGAGGATAGCTTTAG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 210905 42 + 1200634 ACACCCATTCCTGAGGGCACCGAGGAGGGAGGATAGCTTGAG i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133466622 15 - 185818997 acactcattcctgag--------------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296301 15 + 192294377 acactcattcctgag--------------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778216 15 + 3123512 acactcattcctgag--------------------------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498785 15 + 10077455 acattcattcctgag--------------------------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704855 15 + 127223203 acactcattcctgag--------------------------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165065 15 - 1799296 acactcattcctgag--------------------------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747710 15 + 6934359 acactcattcctgag--------------------------- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108107723 13 - 128169293 AAACTCATTcctg----------------------------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 725408 13 - 18371965 acactcattcctg----------------------------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385248 13 + 3566421 Acactcattcctg----------------------------- i cebCap1.NW_016107540v1 C 0 C 0 e otoGar3.GL873564 12738426 3724 + 14340318 I e aotNan1.NW_018514471v1 1886863 128 - 9267652 I a score=7505.000000 s hg38.chrUn_KI270746v1 1572 8 + 66486 ATTTctaa s panTro5.chr2A 90262031 8 + 111504155 ATTcctaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108515566 8 - 162613886 ATTcctaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 124779 8 + 150013 ATTTctaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 210947 8 + 1200634 ATTcctaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108107736 1 - 128169293 -------a i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 725421 1 - 18371965 -------a i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385261 1 + 3566421 -------a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886991 8 - 9267652 atttctga i aotNan1.NW_018514471v1 I 128 C 0 e otoGar3.GL873564 12738426 3724 + 14340318 I e colAng1.NW_012115910v1 1747725 0 + 6934359 C e manLeu1.NW_012105809v1 1165080 0 - 1799296 C e chlSab2.chr21 5704870 0 + 127223203 C e cerAty1.NW_012000909v1 2498800 0 + 10077455 C e macNem1.NW_012011522v1 2778231 0 + 3123512 C e rheMac8.chr3 133466637 0 - 185818997 C e macFas5.chr3 67296316 0 + 192294377 C a score=668326.000000 s hg38.chrUn_KI270746v1 1580 72 + 66486 gggagggta-ttatccattcatgaagg-tccgaccccatgaccaaa-cacctcccagtaagccccacctgcaaca s panTro5.chr2A 90262039 72 + 111504155 gggatggta-ttatccattcatgaagg-tcgaaccccatgaccaaa-cacctcccagtaagccccacctgcaaca i panTro5.chr2A C 0 C 0 s panPan2.chr7 108515574 72 - 162613886 gggagggta-ttatccattaacgaagg-tccatccccatgacccaa-cacctcccagtaagccccacctgcaaca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 124787 72 + 150013 gggagggta-ttatccattcatgaagg-tccaaccccatgaccaaa-cacctcccagtaagccccacctgcaaca i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 210955 72 + 1200634 gggagggta-tcatccattcatgaagg-tccatccccatgacccaa-cacctcccagtaagccccacctgcaaca i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133466637 72 - 185818997 ggaggggta-ttatccgttcctgaggg-tccattcccatgacccaa-cacctcccagtaagccctacctgcaaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296316 72 + 192294377 ggaggggta-ttatccgttcctgaggg-tccattcccatgacccaa-cacctcccagtaagccctacctgcaaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778231 72 + 3123512 ggaggggta-ttatccgttgctgaggg-tccattcccatgacccaa-cacctcccagtaagccctacctgcaaca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498800 72 + 10077455 ggaggggta-ttatccgttcgtgaggg-tccattcccatgacccaa-cacctcccagtaagccctacctgcaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704870 72 + 127223203 ggaggggta-ttatcccttcgtgaggg-tccattcccatgacccaa-cacctcccagtaagccctgcctgcaaca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165080 72 - 1799296 ggaggggta-ttatccgttcgtgaggg-tccattcccatgacccaa-cacctcccagtaagccctacctgcaaca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747725 72 + 6934359 ggaggggta-ttatccattcatgagag-tccattcccatgacccaa-cacttcccagtaagccctacctgcaaca i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108107737 72 - 128169293 gggaggata-ttatccattcatgaggg-tccatccccatgacccaa-catctcccagtaggtcccaccttcaaca i calJac3.chr8 C 0 I 310 s saiBol1.JH378145 725422 58 - 18371965 gagagggta-tta---------------tccatctccatgacccaa-catctcccagtaggtcccaccttcaaca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385262 71 + 3566421 gcgagggta-ttatccattcatgagg--tccatccccatgacccaa-catatcccaataggtcccaccttcaaca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886999 72 - 9267652 gggaggata-ttatccatttatgaag--tccatccccatgacccaattatctcccagtaggtcccaccttcaaca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12742150 72 + 14340318 gggagggcatttacctattcaggagggattcacccc--tgacccag-cacctcccactgggccccagctctaaca i otoGar3.GL873564 I 3724 C 0 a score=2197309.000000 s hg38.chrUn_KI270746v1 1652 234 + 66486 ttggtgatcaaattttaacatgaga-ttggaaggggcaagcattcaaaccatagcaAGAGTTAAATTTCCTTTTT-------AAAAAAATGACTGATATGATTCCATTTCGCCTTAGATAAAAGCTAGTA-TTTCAGCCTACC---ATTAAGTGTGCTTATAGCTCACCAAAAGGGCACTCTGTCTAGGGAATACAGATTTGCCTAGACATATCCTATTGCAGTC-AAAGAAAGAGTAACGAGGGAT s panTro5.chr2A 90262111 234 + 111504155 ttggggatcaaattttaacctgaga-ttggaaggggcaagcattcaaaccatagcaAGAGTTAAATTTTCTTTTA-------AAAAAAATCACCGATATGATTCCATTTCGCTATAGATAAAAGCTAGTA-TTTCAGCCTACC---ATTGAGTGTACTTATAGCTCACCAAAAGGGCACTCTGTCTCGGGAATACAGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCATTGAGGGAT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108515646 235 - 162613886 ctggggatcaaagtttaacatgagatttggaaggggcaagcattcaaaccatagcaAGAGTTAAATTTCCTTTTT--------AAAAAATCACTGATATGATTCAATGTCACCATAGATAAAAACTAATATTTTCAGCCTACC---ATTGAGTGTACTTATAGCTAACCAAAAGGGCACTCTGTCTCGGGGATACAGATTTGCCTAGAGGTATCCTATCACAGTC-AAAGAAAGAGCAATGAGGGAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 124859 234 + 150013 ttggggatcaaattttaacatgaga-ttggaaggggcaagcattcaaaccatagcaAGAGTTAAATTTCCTTTTT-------AAAAAAATCACTGATATGATTCCATTTCACCATAGATAAAAGCTAGTA-TTTCAGCCTACC---ATTGAGTGTACTTATAGCTCACCAAAAGGGCACTCTGTCTCGGGAATACAGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 211027 235 + 1200634 ttggggatcaaattttaacatgagatttggaaggggcaagcattcaaaccatagcaAGAGTTAAATTTCCTTTTA-------AAAAGAATCACTGATATGATTCAATTTCGCCATACATCAAAACTAGTA-TTTCAGCCAACC---ATTGAGTGTACTTATAGCTAACCAAAAGGGCACTCTGTCTCGGGAATACAGATTTGCCAAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133466709 234 - 185818997 cttggtatcaaatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAGAGTTAAATTTCCA-TTA-------AAAAAAATCACTGATGTGATTCCATTTCGCCATAGATAAAAACTAATA-CTTCAACCTACC---ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCAGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296388 235 + 192294377 cttggtatcaaatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAGAGTTAAATTTCCATTTA-------AAAAAAATCACTGATGTGATTCCATTTCGCCATAGATAAAAACTAATA-CTTCAACCTACC---ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCAGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778303 235 + 3123512 cttggtatcagatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAGAGTTAAATTTCCATTTA-------AAAAAAATCACTGATGTGATTCCATTTTGCCATAGATAAAAACTAATA-CTTCAACCTACC---ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCAGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498872 235 + 10077455 cttggtatcagatttcagcatgaaatttggaaggggcaagctttcaaaccatagcaAGAGTTAAATTTCCATTTA-------AAAAAAATCACTGATATGATTCCATTTCGCCATAGATAAAAACTAATA-CTTCAACCTACC---CCTGAGTGTACTTATAGCTAACCCACAGGGCACTCTGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATAGCAGTC-AAAGAAAGAGCAATGAGGGAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704942 236 + 127223203 cttggtatcagatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAGAGTTAAATTTCCATTTT-------AAAAAAATCACTGATACGATTCCATTTCGCCATAGATAAAAAATAATA-CCTCAACCTACC---ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCTATCTCGGGAATACGGATTTGCCTAGAGGTATCCTATCGCAGTCAAAAGAAAGAGCAATGAGGGAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165152 235 - 1799296 cttggtatcaaatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAGAGTTAAATTTCCATTTA-------AAAAAAATCACTGATATGATTCCATGTCGCCATAGATAAAAACTAATA-CTTCAACCTACC---ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCTGTCTCAGGAATACGGATTTGCCTAGAGGTATCCTATAGCAGTC-AAAGAAAGAGCAATGAGGGAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747797 234 + 6934359 ctggggatcaaatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAGAGTTAAATTCCCATTTT--------AAAAAATCACTGATATGACTCCATTTCACCATAGATAAAAACTAGTA-TTTCAGCCTACC---ACTGAGTCTACTTACAGCTAACCCACAGGGCACTCTGTCTCGGGAATATGGATTTGTTTAGAGGTATCCTATCGCAGTC-AAAGAAAGAGCAATGAGGGAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108108119 236 - 128169293 ttggggatcaaattttaacatgagatttggagaggacaagcattcaaacggtagcaAAAATTAAATTTCCA-TTT-------AAAAAAATCACTAATATGATTCCATTTCACCAT-AATAAAAACTAGTA-TTTCAGCCTACCCTTAATGAGTGTACTCACAGCTAACCCAAAGGGCACTCTGTCTCTGGAATACAGACTTGCCTAGAGGTGTCCTATCACAGTC-AGAGAAAGAGCAATGAGAGAC i calJac3.chr8 I 310 C 0 s saiBol1.JH378145 725480 224 - 18371965 ctggggatcaaattttaacgtgagatttggagaggacaagcattcaaaccatagcaAAAGTTAAATTTCCA--TT-------AAAAAAATCACTGATATGATTCCATTTCACCATAAATAAAAACTAACA-TTTCAGCCTACCCTGAATG------------GCTAACCCAAAGGGCACTCTGTCTCTGGAATACAGACTTGCCTAGAGGTATCCTGTCATAGTC-AAAGAAAGAGCAACGAGAGAT i saiBol1.JH378145 C 0 I 322 s cebCap1.NW_016107540v1 1385333 237 + 3566421 ctggggatcaaattttaacatgagatttggagaggacaagcattcaaaccgtagcaAAAGTTAAATTTCCA-TTA-------AAAAAAATCACTGATATGATTCCATTACACCATAAATAAAAACTAATA-TTTCAGCCTACCCTTAATGAGTGTACTCGTAGCTAACCCAAAGGGCGCTCTGTCTCTGGAATACAGACTTGCCTAGAGGTACCCTATCACAGTC-AAAGAAAGAGCAATGAGGGAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1887071 236 - 9267652 ctggggatcaaattttaacatgagatttggagaggacaagcattcaaaccatagcaAAAATTAAATTTCCA--TT-------AAAAAAATCACTGATATGGTTCCATTTCACCATAAATAAAAACTAATA-TTTCAGTCTACCCTTAATGAGTGTACTCATAGCTAACCCAAAGGGCACTCTGTCTCTGGAATACAAACTTGCCTAGCGGTATCCTATCACAGCC-AAAGAAAGAGCAATGAGGGAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12742222 226 + 14340318 tcagggaccaagtttcaacatgcagtttggaggagacaaacaaccaaaccatagcaGTGGTTAAATTTCCACTTAAAAAAAGAAAAAAATCACCAAAATTAT----TTTCCCCACCAAC-GAACCTCATA-TTTCAGCCTGCC-TTTATGAACATACT-----CTCCACCACAAGGCACTTTG-----GAGATACAGATTTGGTTAGGGGGATCTCATTATAGAC----CAAAGAGGAAGAAGGAAC i otoGar3.GL873564 C 0 C 0 a score=10754293.000000 s hg38.chrUn_KI270746v1 1886 1057 + 66486 AGAAAAGGTTAGTGATGGAGACACCAGCGCTGCATTTTGCAACAAACAATGTAAAAACTTTACGGATTGGTTCTGCTAACTTACTACAGTTTACATTCCTCTCAGGTGGGAGAATTGTTGCG-TTTTTTCTTAAGAAAGAAAAGCAATTCAGATAATCTGAAATCTCCACAAGAAGGATAAGAAGCACAGCAGAAACTGTTCTAGGCAGGAAGTCAATCCTTTCAACTGTCTGTGCTCCATATAAAGAATTGTCTGCACTGGGAGTCATATGAGGTACAGACAACAGCCAGACCTCTGATCCTCTCATTATTGATTTCAGAAGAAATTACCAGTCAACTGAGTAATTCACTGAGTCAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGTATCACCATATTCATGAAGCTGGAATATTTTCCATTACTCGTATCACATCCGAATGGAAGATGTTAAAAGGTCTCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTATTAACACACCTGCGAGGTGGAAGGAAGA-GAAAAAAAAGAATAATCAGCTTGAGTTCTTCTCCTTGATAAGACAACTCACTAAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGACGACTCTAGAGTTTTCAAATTGCTGATGCGATTTTAATTTGCTCCAAGTTGAAAATAATTATATTGCTTGTGTTTTAAGGCCCATAATGAGCAATTATATCACACATGATAGTTTCAGCAGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGGATTTTGCTAAAATAAACCATCCGCTGAAAACTACTATTCTGCAAATTTAAAAATAAAGTTTAAATGTTATTTGTATTATTTAATATGCCTGTGAAAAAAATGCGCTATTTGAAAACTAGCTGCTACCTTAATTAATTCTTTATATTAGACGGCTGGTTACAGTAATGCACGGTAAGGTGCTACATAGATATATTGCTAAATTTTCTGCATACACTATGTATTTG s panTro5.chr2A 90262345 1055 + 111504155 AGAAAAGGTTAGTGATGGAGACACCAGCGCTGCATTTTGCAACAAACAATGTAAAAACTTTACGGATTGGTTCTGCTAACTTACTACAGTTTACATTCCTCTCATGTGGGAGAATTGTTGCG-TTTTTTCTTAAGATAGAAAAGCAATTCAGAAAATCTGAAATCTCCACAAGAAGGATAAGAAGCACAGCAGAAACTATTCTAGGCAGGAAGTCAGTCCTTTCAACTGTCTGTGCTCCATAGAAAAAATTGTCCGCACTGGGAGTCATATGAGGTACAGACAACAGCCAGACCTCTGATCCTCTCATTAGCAATTTCAGAAGAAATTACCAGTCAACTGAGTAATTCACTGAGTTAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGTATCACCATATTCATGAAGCTGGAATATTTTCCATTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGTCTCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTATTAACACACCTGCGAGGTGGATGGAAGA-G-AAAAAAAGAATAAGCAGCTTGAGTTCTTCTCCTTGATAAGACAACTCACTAAAAACA------TAAAGAGAAAAATAGAAGTTCAAAACAATTAACCAG-AAGAAGACGACTCTAGAGTTTTTAAATTGTTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAATTATATTCCTTGTGTTTTAAGGCACATGATGAGCAATTACATCACACATGATAGTTTCAGCAGTAAAATAGTATCCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAACTACTATTCTGCACACTTAAAAGTAAAGTCTAAATGTTATTTGTCTTATTTAATAGGTCTGTG-AAAAAATGCGCTATTTGAAAAGTAGGTGCTACCTTAATTAATTATTTATATTAGACGGCTGGTTACAGTAATGCACAGTAAGGTGCTACATAGATAGATTGCTAAATTTTCTGCATATACTATGTATTTG i panTro5.chr2A C 0 C 0 s panPan2.chr7 108515881 1052 - 162613886 ATAAAAGGTTAGTGATGGAGACACCAACCCTGCATTTTACAACAAACAATGTAAAAGCTTTATGGATTGCTTCTGCTAACTTACTACAGTTTACATTCCTCTCAGGTGGGAGAATTGTTGAG-TTTTTTCTTAAGATAGAAAAGCAATTCAGATAATCTGAAATCTCCACAAGAAGGACAAGAAGCACAGCAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCAACTGTCTCTGCTCCACAGAAAGAATTGTCTGCACTGGGAGTCATATGAGGTACAGACAACAGCCAAACCTCTGATCCTCTCATTTGTGATTTCAGAAGAAATTACCAGTCAACTGAGTAATTCACTGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGTATCACCGTATTCATGAAGCTGGAATATTTTCCATTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGTCGCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGATGGAAGA-GAAAAAAAAGAATAATCAGCTTGAGTTCTTCTCCTTGATAAGACAACTTACGAAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGACAACTCTAGATTTTTTAAACTGCTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTCTTTTAAGGCACATAATGAGCAA-TATATCACACATGATAGATTCAGCAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGAAGGAATTTGCTAAAATAAACCATCTGCTGAAAAATACTATTGTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTCTTATTTAATAGGTCTGTG-AAAAAA---GATATTTGAAAAGTAGGTGCTACCTTAATTAGTTCTTTATATTAGACTGTTGGTTACAGTAATGCACAGTAAGGTGCCACATACAAATATTGCTAAATTTTCTGTATATATTATGTATTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 125093 1051 + 150013 AGAAAAGGTTAGTGATGGAGACACCAGCGCTGCATTTTGCAACAAACAATGTAAAAA-TTTACGGATTGGTTCTGCTAACTTACTACAGTTTACATTCCTCTCAGGTGGGAGAATTGTTGAG-TTTTTTCTTAAGATAGAAAAGCAATTCAGATAATCTGAAATCTCCACAAGAAGGATAAGAAGCACAGCAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCAACTGTCTGTGCTCCATAGAAACAATTGTCTGCACTGGGAGTCATAT-AGGTACAGACAACAGCCAGA-CTCTGATCCTCTCATTAGTGATTTCAGAAGAAATTACCAGTCAACTGAGTAATTCACTGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGTATCACCATATTCATGAAGCTGGAATATTTTCCATTACTGGTATCACATCCGAATGGAAGATGTTAAAAGGTCTCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTATTAACACACCTGCGAGGTGGATGGAAGA-G-AAAAAAAGAATAATCAGCTTGAGTTCTTCTCCTTGATAAGACAACTCACTAAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGACGACTCTAGAGTTTT-AAATTGCTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAATTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGTTTCAGCAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAACTACTATTCTGCAAATTTAAAAATAAAGTTTAAATGTTATTTGTCTTATTTAATATGTCTGTGAAAAAAATGCGATATTTGAAAAGTAGCTGCTACCTTAA-TAATTCTTTATATTAGACGGCTGGTTACAGTAATGCACAGTAAGGTGCTACATAGATATATTGCTAAATTTTCTGCATATACTATGTATTTG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 211262 1056 + 1200634 AGAAAAGGTTAGTGATGGAGACACCAACGCTGCATTTTACAACAAACAATGTAAAAACTTTACGGATTGCTTCTGCTAACTTACTACAGTTTACATTCCTCTCAGGTGGGAGAATTGTTGAG-TTTTTTCTTAAGATAGAGAAGCAATT-AGATAATCTGAAATCTCCACAAGAAGGATAAGAAGCACAGCAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCAACTGTCTGTGCTCCGTAGAAACAATTGTCTGCGCTGGGAGTCATATGAGGTACGGACAACAGCCAGACTTCTGATCCTGTCATTTGCGATTTCAGGAGAAATTACCAGTCAACTGAGTAATTCACTGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGTATCACCATATTCATGAAGCTGGAATATTTTCCATTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGGCTCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAGTGAAATTATTAACACACCTGCGAGGTGGATGGAAGA-GAAAAAAATGAATAATCAGCTTGAGTTCTTCTCCTTGATAAGACAACTCACTAAAAACA------TAAAGAGAAAAATAGAAGTTTAAAATAATTAACCAG-AAGAAGACAACTCTAGATTTTTTAAATTGCTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACATATGATAGATTCAGCAGTAAAATATTATCGGTTAACAGCTGGAACTCATAAAACCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAAATACTATTTTGCAAATTTAAAAATAAAGCTTAAATGTTATTTGTCTTATTTAATAGGTCTGTGAAAAAAATGAGATATTTGAAAAGAAGGTGCTACCTTAATTATTTCTTTATATTAGACAGTTGGTTACAGTAATGCACAGTAAGGTGCTACATAAAAATATTGCTAAATTTTCTGCATATACTATGTATTTA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133466943 1058 - 185818997 AGAAAAGGTTAGTGATGGAGACAGCAACACTGCATTTTACAACAAACAATGTAAGAACTTTACAGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGTGGGAGAATTGTTGAG-TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCTACAAGCAGGATAAGAAGCACAGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACTGTCTGTGCTCCACAGAAACAATTGTCTGCATTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCACTGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTGACACACCTGCAAGGTGGATGGAAGAGGAAAAAAAAGAATAATCAGCTTGAGTACTTCTTCTTGATAAGACAACTCACTAAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGATTTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAAATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTATATATTGTGTATTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296623 1058 + 192294377 AGAAAAGGTTAGTGATGGAGACAGCAACACTGCATTTTACAACAAACAATGTAAGAACTTTACAGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGTGGGAGAATTGTTGAG-TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCTACAAGCAGGATAAGAAGCACAGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACTGTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCACTGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTGACACACCTGCAAGGTGGATGGAAGAGGAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAACTCACTAAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGATTTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAAATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTATATATTGTGTATTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778538 1058 + 3123512 AGAAAAGGTTAGTGATGGAGACAGCAACACTGCATTTTACAACAAACAATGTAAGAACTTTACAGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGTGGGAGAATTGTTGAG-TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCTACAAGCAGGATAAGAAGCACAGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACTGTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTATCAGTCAACTGAGTAATTCACTGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTGACACACCTGCAAGGTGGATGGAAGAGGAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAACTCACTAAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGATTTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTACATCACACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCCAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAAATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTATATATTGTGTATTTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2499107 1058 + 10077455 AGAAAAGGTTAGTGATGGAGACAGCAACACTGCATTTTACAACAAACAATGTAAGAACTTTACGGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGTGGGAGAATTGTTGAG-TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCTACAAGCAGGATAAGAAGCACAGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACTGTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTGCAGACGAAATTACCAGTCAACTGAGTAATTCACTGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGATGGAAGAGGAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAACTCACTAAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGATTTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCGAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAAATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTATATATTGTGTATTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5705178 1058 + 127223203 AGAAGAGGTTAGTGATGGAGACAGCAACGCTGCATTTTACAACAAACAATGTAAGAACTTTATGGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGTGGGAGAATTGTTGAGTTTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCCACAAGCAGGATAAGAAGCACAGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACTGTCTGTGCGCCATGGAAACAATTGTCTGCACTGGGAGTCGTATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACAGAGTAATTCACTGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTTTAAGATGGATATGAAAGAATATTTTTTGAGAAATGAGATTATTAACACACCTGCAAGGTGGATGGAAGA-GAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAACTCACTAAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGATTTTTTTAATTGCCGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTACATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGTGGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAAATATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTCTTATTTAATAGGCCTGTGAAAAAAATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATGTTAGACAGTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTACATTTTCTGTATATATTGTGTATTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165387 1058 - 1799296 AGAGAAGGTTAGTGATGGAGACAGCAACACTGCATTTTACAACAAACAATGTAAGAACTTTACGGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGTGGGAGAATTGTTGAG-TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCGCTACAAGCAGGATAAGAAGCACAGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACTGTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCACTGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGATGGAAGAGGAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAACTCACTAAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGATTTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCGAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAAATATTATTCTGCAAATTTAAAAGTAAAAGTAAAATGTTATTTGTCTTATTTAATAGGCCTGTGAAAAAAATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACACCTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTATATATTGTGTATTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1748031 1051 + 6934359 AGAAAAGGTTAGTGATGGAGACTGCAACACTGCATTTTACAACAAACAGTGTAAGAACTTTACGGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGTGGGAGAATTGTTGAG-TTTTTTCTTAAGACAGAAAAGCAATTCAGATAATCTGAAATCTCCACAAGCAGAATAAGAAGCACAGTAGAAACTATTCAAGGCAGGAAGTTAATCCTTTTGA----CTGTGCTCCATAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCGTTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCACTGAGTAAAGTAAACATTTGGCACTGA-AAGAAGTTAGACGGATAACTATTTGCCTCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGTTGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAGAGAATATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGATGGAAGA-GGAAAAAAAGAATAATCAGCTTGAGTTATTCTTCTTGATAAGACAACTCACTAAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAA--CTAGATTTTTTTAATTGCCGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCGGTGGTAAAATATTATCCGTTAACAGCTGGAACTCAAAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAAATATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTCTTATTTAATATGCCTGTGAAAAAAACGAAATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACAGTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATATTCTGTATATATTGTGTATTTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108108355 1033 - 128169293 AGAAAAAAGTAGTTGTGTAGACACCAGTGCTGTGTTTTACAACAA----TGTAGGAACTTTACA-ATTCCTACAACTAACTTATTACATTTTACATTCCTCTCAGATGGGAGAATCATTGAG-ATTTTGCTTAAGACAGAAAAGTAATTCAGATAAGCTGAGATCTCCACAAGCAGGATAAGAAGCGCAGCAGAAACCATTCTAGGCAGGAAGTCAATCCCTTCAACTGTCTGTGCTCCATAGAAACAACTTCCTGCACTGGGAGTCATACGAGGTACAGACAACAGCCAAAGTTCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACTGAGTAATTCATTGAGTAAAGCAAACATTTGGCACTGA-AAGAGGGTAGACAGATAACTATTTGTATCACTATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACTTCTGAATGGAAGATCTTAAAAGGTCTCTCATCTTGTAAAATGGATAGAAAAGAACATTTTCTCAGAAATGAAATTATTAACACACCTGCAAG----CTGGAGGA-GGAGAAAAAGAATAATCAGCTTGAGCTCTT---CTTGATAAGACCACTCACTAAAAACA------TAAAGAGAAAAATACAATATTAAAATA-------AG-CAGAAGACAACTCTAGATTTTTTAAATTGCTGATAAGATTTTAATTTGCTCCAAGATGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGCAGTAAAATATTATTCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGAAATTTGCTAAAAT-AACCATCTGCTGAAAAATACTATTCTGCAAATTTAAAAATAGAGTTAAAACGTTATTTGCCTTATTTAACAGGTCTATGAAAAACATGACATATTCGAAAAGTAGGTGCTACCTTAATCAGTTCCTTATATTAGACAGTTGGTTATAATAATTCAC----AGGTGCTACATATAAATATTTCCAAATATTCTGTATATATTGTGTATTTG i calJac3.chr8 C 0 I 102 s saiBol1.JH378145 726026 1034 - 18371965 agaaaaAGGTAGTTGTGTAGACACCAATGCTGCATTTTACAACAA----TGTAGGAACTTTACA-ATTCCCACAAC-AACTTACTACATTTTACATTCCGCTCAGATGGGAGAATCATTGAG-ATTTTGCTTAAGACAGAAAAGTAATTCGGATAAGCTGAGATCTTCACAAGCAGG-----------AGAAGAAACTATTCTAGGCAGGAAGTCAATCCCTTCCACTGTCTATGCTCCACAGAAACAATTTCCTGCACTGGGAGTCATACGAGGTACAGACAACAGCCAAGCCCCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACTGAGTAATTCATTGAGTACAGCAAACATTTGGCACTGA-AAGAGGTTAGACAGATAACTATTTGTATCACTATGTTCATGAAGCTGGAATATTTTCCACTATTGGTATCACATCTGAATGGAAGATCTTAAAAGGTCTCTCAACTTGTAAAGTAGATAGGAAAGAACATTTTCTCAGAAATGAAATTATTAGCACACCTGCAAGGTGTATGGAGGA-GGAGAAAAAGAATAATCAGCTCGAGCTCTT---CTTGATAAGACTACTCACTAAAAGCA------TAAAGAGAAAAATACAAGATTAAAATAATTAAGCAG-AAGAAGACAACTCTAGATTTTTTTAATTGC---TAAGATTTTAATTTGCTCCAAGATGAAAATAACTATATTGCTTGTGTTTTAAGGCACACAATGAGCAATGATATCACACATGATAGATTCAGGAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAACGCATACCACAACGTGAAGATGAAATTTGCTAAAATAAACCATCTGCTGAAAAATACTATTCTGCAAATTTAAAGATAAAGTTAAAACGTTATTTGCCTTAGTTAACAGGTCTATGAAAAAAAGGACATATTTGAAAAGTAGTTGCTACCTTAATTAGTTCTTTATATTAGACAGTTGGTTATAGTAATTCACAGTAAGGTGCTACATATAAACACTGCCAAATTTTCTGTATATTTTGTGGATTTG i saiBol1.JH378145 I 322 I 87 s cebCap1.NW_016107540v1 1385570 1036 + 3566421 AGAAAAAGGTAGTTGTGTAGACACCAATGCTGCATTTTACAACAA----TGTAGGAACTTCACA-ATTCCTACAACTAACTTATTGCATTTTACATTCCTCTCAAATGGGAGAATCATTGAG-ATTTTGCTTAAGACAGAAAAGTCATTGAGATAAGCTGAGATCTCCACAAGCAGGATAAGAAGCACAGCAGAAACTATTCTAGGCAGGAAGTCAATCCCGTTAACTGTGTATGCTCCGTAGAAACAATTTCCTGCACTGGGAGTCATACGAGGTACAGACAACAGCCAAACCTCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACTGAGTAATTCACTGAGTAAAGCAAACATTTGGCATTGA-AAGAGGTTAGACAGATAACTATTTGTATCGCTATATTCATGAAGCTGGAATATTTTCCACTGCTGGTATCACATCTGAATGGAAGATCTTAAAAGGTCTCTCATCCTGTAAAATGGATAGGAAAGAACATTTTCTCAGAAATGAAATTATTAACACACCTGCAAGGTGTATGGAGGA-GGAGAAAAAGAATAATCAGCTTGAGCTCTT---CTTGATAAGACTACTCACTAAaaaca------taaagagaaaaatacaagattaaaataaTTAAGCAG-AAGAAGACAACTCTAGATTTTTTAAATTGCTGATAAGATTTCAATTTGCTCCAAGATGAAAATAACTCTATTGCTTGTGTTTTAAGGCATATAATGAGCAATGATATCCCACACGATAGATTCAGCAGTAAGATATTATCCGTTAACAGCTAGAACT--------CATACCACAATGTGAAGATGAAATTTGCTAAAATAAACCAGCTGCTGAAATATACTATTCTGCAAATTTAAAAATAAAGTTAAAATGTGATTTGCCTTATTTAACAGGTCTATGAAAAAAATGACATATTTGAAAAGTAGGTGCTAACTT----AGTTTTTTATATTAGACAG-TGGTTACAGTAATTCACAGCAAGGTGCTACATATAAATACTGCCAAATTTTCTGTATATATTGTGTATTTG i cebCap1.NW_016107540v1 C 0 I 83 s aotNan1.NW_018514471v1 1887307 1044 - 9267652 AGAAAAAGGTAGTTGTGTCGACACCAATGCTGCATTTTACAAAAA----TGCAGGAAATTTACA-ATTCCTACTACTAACTTATTACATTTTACATTGCTCTCAGATGGGAGAATCATTGAG-CTTTTGCTTAAGACAGAAAAGTAATTCAGATAAGCTGAGATCTCCACAAGCAGGATAAGAAGCACAGCAGTAACTATTCTAGGCAGGAAGTCAATCCCTTCAACTGTCCATGCTCCATAGAAACAATTTCCTGCACTGGGAGTCATACGAGGTACAGAAAACAGCCAAACCTCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACCGAGTAATTCATTGAATAAAGCAAACATTTGGCACTGA-AAGACGTTAGACAGATAACTATTTGTATCACTATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATCTTAAAAGGTCTCTTATCTTGTAAAATGGATAGGAAAGAACATTTTCTCAGAAATTAATTTATTAACACACCTACAAGGTGTATGGAGGA-GGAGAAAAAGAATAATCAGCTTGAGCTCTT---CTTGATAAGACTACTCACTAAAAACA------T--AGAGAAAAATACAAGATTAAAATAATTA---AG-CAGAAGACAACTCTAGATTTTTTTAATTGCTGATAAGATTTTAATTTGCTCCAAGATGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGCAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGAAATTTGCTAAAATAAACCATCTGCTGAAAAATACTATTCTGCAAATTTAAAAATAAAGTTAAAACACTATTTGCCTTATTTAACAGGTCTATGAAAAAAATGACATATTTGAAAAGTAGGTGCTACCTTAATTAGTTCTTTATATTAGACAGTTGGTTACAGTAATTCACAGTAAGGTGCTACATATAAATACTGCCAAATTTTCTGTATATATTGTGTATTTG i aotNan1.NW_018514471v1 C 0 I 149 s otoGar3.GL873564 12742448 982 + 14340318 AGAGAGGCCGAGCGGTGGGAATGCTGACAC--------------------------ACATTGTGAATTGCTTCAACTTACTCATTACA-TTTATATTCCACTCAGGTTGAAGACTTGTTGAA-TATTT--TTAAGAAAGAG-AGTGATGCAAATTTTTTGGGCTCTCCACACACAAGATTA-AGACCCAGAAGAAACTAGTCTGGGCGTGAAGTCAGTCCATTCAG----CTGTGTCCCGTAGAAACCACCATCCATGCTGGGAGTCACACAGAGCACAGAC------------------TTGCTCTCTTGGAATTTCAGAAGAAAGTTTTAGTCAACTCAGTAATTCACTGAGAACACCAAATATTTAGCACTAATTCGGGGTTAGAGTGATAATCATTTCCACCACCATGTTCATGGAGTTGAAATATTTTCTACTACTGGTATCATAACCAAATAAAGGAACTTACAAGTCTTCTCATCTTCTAAGATGGATATGAGAGAACA---TCTCAGAAATGAAATTA---ACACACTTGCAAGGTATATGGA-GA-GAGACAAAAAGATAATCAGCTTGAATTTGTTCTCTT-----GACAATTCTCTAAAAAAAATTTTTTTCAGAGAAAAATGTAAGTTTAAAATAATTAGCCAGAAAGAAGACAAATGTAG--TTTTTAAAATGCTGATAAGATTTTAATTTGTTGCAAGTTGAAAATAACTATATTGCTGGTGTTTTACGGCACATAATGAGCAATTATATCACACGTGATAAATTC-GCAGTAAAATATTATCAATTAACAGTTGGAACTCATAAA-GCATAACATCATGTGAACATGGAA-TTGACAAGAAAGACCATCTGCTGAAAAATACTATTCTGTAAATTTAA------AGTTAAAATGTTATTTGCCTTATTTAATAGATCTGTGAAAATGATGAGATATTTT-TAAGTAAGTGTTACCTTAATTA-TTTACTACATTTGACAGTTTGTTATAG-----CACAATAAGGGGCTCCATGTAAGTATTGCTAAATTTTCCATATAGATCATATAGTTA i otoGar3.GL873564 C 0 C 0 a score=5748.000000 s hg38.chrUn_KI270746v1 2943 3 + 66486 GCT s panTro5.chr2A 90263400 3 + 111504155 GCT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108516933 3 - 162613886 GCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 126144 3 + 150013 GCT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 212318 3 + 1200634 GCT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133468001 3 - 185818997 GCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67297681 3 + 192294377 GCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779596 3 + 3123512 GCT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500165 3 + 10077455 GCT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706236 3 + 127223203 GCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166445 3 - 1799296 GCT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1749082 3 + 6934359 GCT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109490 1 - 128169293 g-- i calJac3.chr8 I 102 C 0 s saiBol1.JH378145 727147 1 - 18371965 g-- i saiBol1.JH378145 I 87 C 0 s cebCap1.NW_016107540v1 1386689 1 + 3566421 T-- i cebCap1.NW_016107540v1 I 83 C 0 s otoGar3.GL873564 12743430 3 + 14340318 GCT i otoGar3.GL873564 C 0 C 0 e aotNan1.NW_018514471v1 1888351 149 - 9267652 I a score=1661164.000000 s hg38.chrUn_KI270746v1 2946 175 + 66486 TAAATTATTTGAAATTTTATAGTTAAAATAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAA-----------AGCGTCTTACACTCTAAATATTATTTGTCACCTATATATTTGTCTTTTCTCTATAGGAAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTT--G---- s panTro5.chr2A 90263403 177 + 111504155 TAAATTATTTGAAATTTTATAGTTAAAATAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAA-----------AGAGTCTTACACTCTAAATATTATTTGTCACCTACATATTTGTCTTTTCTCTATAGGAAATTTTAAATTTTTCCCTTGAAGCTTTAATTATTTGAG---- i panTro5.chr2A C 0 C 0 s panPan2.chr7 108516936 180 - 162613886 TAAATTATTTGTAATTTTATAGTTAAAGTAACTAATATATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAATA----TTGTCACATATATATTTGTCTTTTCTCTATAGGAAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTTGAG---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 126147 177 + 150013 TAAATTATTTGAAATTTTATAGTTAAAGTAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAA-----------AGCGTCTTACACTCTAAATATTATTTGTCACCTATATATTTGTCTTTTCTCTATAGGAAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTTCAG---- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 212321 177 + 1200634 TAAATTATTTGAAATTTTATAGTTAAAGTAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAA-----------AGCGTCTTACACTCTAAATATTATTTGTCACATATATATTTGTCTTTTCTCTATAGGGAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTTGAG---- i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133468004 178 - 185818997 TAAATTATTTGAAATTTTA----TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTATTATTTGTCATATATAAATTTGTCTTTTCTCTACAGGAAACTTTCAATTTTTCCCTTAAAACTTCAATTATTTG------ i rheMac8.chr3 C 0 I 2 s macFas5.chr3 67297684 178 + 192294377 TAAATTATTTGAAATTTTA----TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTATTATTTGTCATATATAAATTTGTCTTTTCTCTACAGGAAACTTTCAATTTTTCCCTTAAAACTTCAATTATTTG------ i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 2779599 178 + 3123512 TAAATTATTTGAAATTTTA----TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTATTATTTGTCATATATAAATTTGTCTTTTCTCTACAGGAAACTTTCAATTTTTCCCTTAAAACTTCAATTATTTG------ i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 2500168 178 + 10077455 TAAATTATTTGAAATTTTA----TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTATTATTTGTCATATATAAATTTGTCTTTTCTCTACAGGAAACTTTCAATTTTTCCCTTGAAACTTCAATTATTTG------ i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 5706239 178 + 127223203 TAAATTATTTGAAATTTTA----TAAAGTAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTATTATTTGTCATATATATATTTGTCTTTTCTCTACAGGAAACTTTCAATTTTTCCCTTGAAACTTCAATTGTTTG------ i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 1166448 178 - 1799296 TAAATTATTTGAAATTTTA----TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAATATTATTTGTCATATATAAATTTGTCTTTTCTCTACAGGAAACTTTCAGTTTTTCCCTTAAAACTTCAATTATTTG------ i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 1749085 182 + 6934359 TAAATTATTTGAAATTTTATAGTTAAAGTAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATACACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTATTATTTGTTATATATATATTTGTCTTTTCTCTACAAGAAACTTTCAATTTTTCCCTTGAAACTTCAATTATTTG------ i colAng1.NW_012115910v1 C 0 I 1033 s calJac3.chr8 108109491 182 - 128169293 taaa--atttgaaattttatagttaaagtaacaaatgtatatttaaattttttGACATGAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTAAATATTATTTGTCATATATACATTTGTCTTTTCTCTATAGGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATTTGCG---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727148 183 - 18371965 taaattatttGGAATTTTATAGTTAAAGTAACAAAT-TACATTTAAGTCTTTTGACATAAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTAAATATTATTTGTCATATATATATTTGTCTTTTCTAGATAGGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATCTCAG---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1386690 181 + 3566421 TAAATTATTTGAAATTTGATAGTTAAAGTAACAAAT-TATATTTACATTTTTTGACATAAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTGAATATTATTTGTCATATAT--ATTTGTCTTTTCCGTATAGGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATCTGAG---- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1888500 184 - 9267652 TAAATTATTTGAAATTGTATAGTTAAAGTAACAAATGTATATTTAAATTTTTTGACATAAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTAAATATTATTTGTCATATACATATTTGTCTTTTCTCTATAGGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATTTGAG---- i aotNan1.NW_018514471v1 I 149 C 0 s otoGar3.GL873564 12743433 182 + 14340318 --TGTTATTTGAAATTTCA----TA---CAATAAATGCATATTTAGATTGCTTGATGCAAATTGTGAATCTACTATTATAAAGCTTTCTTTCAGTAACTTGTATTCTGAACAAAATTACTTATAGATATATTTGTTTTTACTCTGGAGGTAAGTTTAAA-TTTTCCCCCATAGTTTTGATAATTTGAGTTTG i otoGar3.GL873564 C 0 C 0 a score=424804.000000 s hg38.chrUn_KI270746v1 3121 53 + 66486 TCTAtaaaacaaactgataatgtacaaattaacaggagaaa---aaggtttacaga s panTro5.chr2A 90263580 53 + 111504155 TCTAtaaaacaaactgataatgtacaaattaacaggaaaaa---aaggtttacaga i panTro5.chr2A C 0 C 0 s panPan2.chr7 108517116 53 - 162613886 TCTAtaaaacaaactggtaatgtacaaattaacaggaaaaa---aaggtttacaga i panPan2.chr7 C 0 I 6 s gorGor5.CYUI01000341v1 126324 53 + 150013 TCTAtaaaacaaactgataatgtacaaattaacaggaaaaa---aaggtttacaga i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 212498 53 + 1200634 TCTATAACACAAACTGATAATGTATAAATTAACAGGAAAAA---AAGGTTTACATA i nomLeu3.chr4_GL397525_2_random C 0 I 6 s rheMac8.chr3 133468184 52 - 185818997 TCTATAAAACAAACTGATAATGTACAAATTCACA-GAAAAA---AAGGCTTACAGA i rheMac8.chr3 I 2 I 3 s macFas5.chr3 67297864 52 + 192294377 TCTATAAAACAAACTGATAATGTACAAATTCACA-GAAAAA---AAGGCTTACAGA i macFas5.chr3 I 2 I 3 s macNem1.NW_012011522v1 2779779 52 + 3123512 TCTATAAAACAAACTGATAATGTACAAATTCACA-GAAAAA---AAGGCTTACAGA i macNem1.NW_012011522v1 I 2 I 3 s cerAty1.NW_012000909v1 2500348 52 + 10077455 TCTATAAAACAAACTGATAATGTACAAATTCACA-GAAAAA---AAGGCTTATAGA i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 5706419 52 + 127223203 TCTGTAAAACAAACTGATAATGTACACATTCACA-GAAAAA---AAGGCTTACAGA i chlSab2.chr21 I 2 I 3 s manLeu1.NW_012105809v1 1166628 52 - 1799296 TCTATAAAACAAACTGATAATGTACAAATTCACA-GAAAAA---AAGGCTTACAGA i manLeu1.NW_012105809v1 I 2 I 3 s calJac3.chr8 108109673 52 - 128169293 TTTATAAAACAAACTGATAATGTACAAATTAATA-TGTGAA---AAGGCTTACAGA i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 727331 52 - 18371965 TTTATAAAACAAACTGATAATGCAAAAATCAATA-TGTGAA---AAGGCTTAGAGA i saiBol1.JH378145 C 0 I 6 s cebCap1.NW_016107540v1 1386871 52 + 3566421 TCTATAAAACAAACTGATAACGTACAAATTAATA-TGTGAA---AAGCCTTACAGA i cebCap1.NW_016107540v1 C 0 I 6 s aotNan1.NW_018514471v1 1888684 52 - 9267652 TCTATAAAACAAACTGATAATGTACAAATTAATA-TGTGAA---AAGGCTTCCAGA i aotNan1.NW_018514471v1 C 0 I 3 s otoGar3.GL873564 12743615 55 + 14340318 TTTGAAAAAAAAATTAGTAATACACAGATTAATT-GGAAAAAGCAGGGCTTACAAA i otoGar3.GL873564 C 0 C 0 e colAng1.NW_012115910v1 1749267 1033 + 6934359 I a score=698981.000000 s hg38.chrUn_KI270746v1 3174 84 + 66486 tatgtgcacaagtatgcacttggagtttacataatatatataaat----------------------------------------------------------------------------------------------atatctatacaaatatttgtatattataaatagatatac s panTro5.chr2A 90263633 84 + 111504155 tatgtgcacaagtatgaacttggagtttacataatatatataaat----------------------------------------------------------------------------------------------atatctatacaaatatttgtatattataaatagatatac i panTro5.chr2A C 0 C 0 s panPan2.chr7 108517175 178 - 162613886 tatgtgcacaagtatgcacttggagtttacataatatatataaACatatacacaaatatatacaaatatttgtatatataaatatatatacaaatatatgtatattataaatatatatacaaatatgtgtatattataaatatatatacaaatatttgtatattataaatatatatac i panPan2.chr7 I 6 C 0 s gorGor5.CYUI01000341v1 126377 84 + 150013 tatgtgcacaagtatgcacttggagtttacataatatatataaAC----------------------------------------------------------------------------------------------atatctatacaaatatttgtatattataaatagatatac i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 212557 82 + 1200634 TATGTGCACAAGTATGCACTTGGAGTTtacataatacatataa------------------------------------------------------------------------------------------------atatatatacaaatatttgtatgttataaatagatatac i nomLeu3.chr4_GL397525_2_random I 6 C 0 s rheMac8.chr3 133468239 94 - 185818997 TATGTGCACCAGTATGCACTTGGAGTTtacataatatatataaatatatatacac------------------------------------------------------------------------------------aaatatatacaaatatttgtatattataaacatatatac i rheMac8.chr3 I 3 C 0 s macFas5.chr3 67297919 94 + 192294377 TATGTGCACCAGTATGCACTTGGAGTTtacataatatatataaatatatatacac------------------------------------------------------------------------------------aaatatatacaaatatttgtatattataaacatatatac i macFas5.chr3 I 3 C 0 s macNem1.NW_012011522v1 2779834 94 + 3123512 TATGTGCACCAGTATGCACTTGGAGTTtacataatatatataaatatatatacac------------------------------------------------------------------------------------aaatatatacaaatatttgtatattataaacatatatac i macNem1.NW_012011522v1 I 3 C 0 s cerAty1.NW_012000909v1 2500400 94 + 10077455 TATGTGCACAAGTATGCACTTGGAGTTtacataatatatataaatatatatacac------------------------------------------------------------------------------------aaatatatacaaatatttgtatattataaacatatatac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706474 94 + 127223203 TATGTGCACAAGTATGCACTTGGAatttacataatatataaaaatatatatccgc------------------------------------------------------------------------------------aaatatatacaaatatttgtatattataaacatatatac i chlSab2.chr21 I 3 C 0 s manLeu1.NW_012105809v1 1166683 94 - 1799296 TATGTGCACCAGTATGCACTTGGAGTTtacataatatatataaatctatatacac------------------------------------------------------------------------------------aaatatataccaatatttgtatattataaacatatatac i manLeu1.NW_012105809v1 I 3 C 0 s colAng1.NW_012115910v1 1750300 94 + 6934359 TATGTGCACAAGTATGCACTTGGTGTTtacataatatatataaatatatatacgc------------------------------------------------------------------------------------aaatatatacaaatatttgtatattataaacatatatac i colAng1.NW_012115910v1 I 1033 C 0 s calJac3.chr8 108109728 94 - 128169293 TATGTGCACACGTATGCACTTGGAGTTTACAAAatatatatgaatatacatacac------------------------------------------------------------------------------------aaatatatacaaatatttctatactgtaaatatatatgt i calJac3.chr8 I 3 I 2 s saiBol1.JH378145 727389 93 - 18371965 TATGTGCACACATATGCACTTGGAGTTTACACAatatatatgaatata-atacac------------------------------------------------------------------------------------aaatatatacaaatatgtctatactgtatatatatataC i saiBol1.JH378145 I 6 C 0 s cebCap1.NW_016107540v1 1386929 94 + 3566421 TATGTGCACACATATGCACTTAGAGTTTACACAatatatatgaatatatatacac------------------------------------------------------------------------------------aaatatatacaaatatttctatactgtaaatatatatat i cebCap1.NW_016107540v1 I 6 I 4 s aotNan1.NW_018514471v1 1888739 94 - 9267652 TAGGTGCACACATATGCACTTGGAGTTTACACAatataaatgaatatatatagac------------------------------------------------------------------------------------aaatatatataaatatttctatactgtaaatatatatat i aotNan1.NW_018514471v1 I 3 I 2 s otoGar3.GL873564 12743670 8 + 14340318 -------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTA------------- i otoGar3.GL873564 C 0 C 0 a score=1072021.000000 s hg38.chrUn_KI270746v1 3258 156 + 66486 aaaaatatgctat--atatataAAAACTCCAGGAAAGGCAAGATAGTCAACACGCCtatgctgtcttcaggttacagaaaacacagagctgtaggttggtaaatcaggctttgcggaagacaggtgacgacaaggaagaaagaggagcctgacagcag s panTro5.chr2A 90263717 156 + 111504155 aaatatatactat--atatataAAAACTCCAGGAAAGGCAAGGTAGTCAACACGCCtatgctgtcttgaggttacagaaaacacagagctgtaggttggtaaatcaggctttgcggaagacaggtgacgacaaggaagaaagaggagtctggcagcag i panTro5.chr2A C 0 C 0 s panPan2.chr7 108517353 158 - 162613886 aaatatatactataaatatatataAACTCCAGGAAAGGCAAGGTAGTTAACATGTCtatgctgtcttgaggttacagaaaacacacagctgtatgttggtaaatcaggctttgcggaagacaggtgacgatgaggaagaaagaggagcctggcagcag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 126461 156 + 150013 aaatatatgctat--atatataAAAACTCCAGGAAAGGCAAGGTAGTCAACACGCCtatgctgtcttgaggttacagaaaacacagagctgtaggttggtaaatcaggttttgcggaagacaggtgacgacaaggaagaaagaggagcctggcagcag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 212639 156 + 1200634 aaatatatactat--atatataAAAACTCCAGGAAAGGCAAGGTAGTTAACACATCtatgctgtcttgaggttacagaaaacacagagctgtacgttggtaaatcaggctttgtggaagacaggtgacgacaaggaagaaagaggagcctggcagcag i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133468333 151 - 185818997 aa-tatatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaa--acagagctgtatgttggtaaatcagactttgcggaagacagctgattatgaggaaggaaaaggaacctgcaagcag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298013 152 + 192294377 aagtatatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCTAGCCTGTTTTGAGGTTACAGaaa--acagagctgtatgttggtaaatcagactttgcggaagacagctgattatgaggaaggaaaaggaacctgcaagcag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779928 152 + 3123512 aagtatatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaa--acagagctgtatgttggtaaatcagactttgcagaagacagctgattatgaggaaggaaaaggaacctgcaagcag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500494 154 + 10077455 aagtctatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgccgttttgaggttacagaaaacacagagctgtatgttggtaaatcagactttgcggaagacaggtgattatgaggaaggaaaaggaacctgcaagcag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706568 154 + 127223203 aagtatatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaaacacagagctgtatgttggtaaatcagactttgcggaagacaggtgattaggaggaaggaaaaggaacctgcaagcag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166777 154 - 1799296 aagtatatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaaacacagagctctatgttggtaaatcagactttgcggaagacaggtgattatgaggaaggaaaaggaatctgcaagcag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750394 153 + 6934359 aaatatatactat--atatat--aAACTTCAGGAAAGGCAAGGTAGTTGACACATCTATGCTATTTTGAGGTTTCAGAAAACACAGAGCTGGatgttggtaaatcagactttgtggaagacaggtgattatgaggaaggaaaaggaa-ctgcaagcag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109824 140 - 128169293 aaatatatactat--atatTA--AAGCTCCAGGAAAGGCAACATAGTTAACACTTCCACGCTG--TTGAGGTTAGAGAAAACACAGAGCTGtatgttggcaaatgagg------------caggtgacagtgaggaaggaagaggaggctggcagcag i calJac3.chr8 I 2 C 0 s cebCap1.NW_016107540v1 1387027 142 + 3566421 aaatatatactat--atataA--AAACTCCAGGAAAGGCAAGATAGTTAACActtctatgctgtcttgaggttagagaaaacacagagctgtatgttggtaaatcagg------------caggtgacggtaaggaaggaagaggaggctggcagcag i cebCap1.NW_016107540v1 I 4 C 0 s aotNan1.NW_018514471v1 1888835 142 - 9267652 aaatatatactat--atataA--AAACTCCAGGAAAGGCAAGATAATTAACActtctatgctgtcttgaggttagagaaaacatagagctgtatgttggtaaatcagg------------caggtgatggtaaggaaggaagaggaggctggcagcag i aotNan1.NW_018514471v1 I 2 C 0 s otoGar3.GL873564 12743678 31 + 14340318 -------------------------------------------------------------TGTGTTCA----------------------TATGTTgg-agatctggct-------------------------------------------agcaa i otoGar3.GL873564 C 0 C 0 e saiBol1.JH378145 727482 0 - 18371965 C a score=2702831.000000 s hg38.chrUn_KI270746v1 3414 271 + 66486 aggtggt----cttgttacatggatgaaacctcacagggagcagccctcctcttgggaagtatagata-------------ggaaatggt--ttttagaagtgtaaacgtgccaggctc--agttaatctttcctaaacccagacaagggaatatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaacacagcttttcagctattcttgtagaagaagctatctccagtcttccgagtagccatcttgaaatatgtcaaaa s panTro5.chr2A 90263873 284 + 111504155 aggtggt----cttgttacatggatgaaacctcacagggagcagccctcctcttgggaagtatagataggaaatggtttttggaaatggt--ttttagaaatgtaaacgtgccaggctc--agttaatctttcctaaacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-cccgaacaaacacagcttttcagccattcttgtagaagaagctatctccagtcttctgagcagccatcttgaaatacgtcaaaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108517511 271 - 162613886 aggtggt----cttgttatgtggatgaaatctcacagggagcagccctcctcttgggaagaatagata-------------ggaaatggt--ttttagaactttaaaagtgccagactc--agttaatctttcctaaacccagacaagggagtgtctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaatgaacacagcttttcagctattcttgtagaagaagctatttccagtcttccgagtaaccaccttgaaatatgtcaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 126617 271 + 150013 aggtggt----cttgttacatggatgaaacctcacagggagcagccctcctcttgggaagtatagata-------------ggaaatggt--ttttagaaatgtaaacgtgccagactc--agttaatctttcctaaacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaacacagcttttcagcttttcttgtagaagaagctatctccagtcttccgagtagccatcttgaaatatgtcaaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 212795 271 + 1200634 aggtggt----cttgttacatggatgaaacctcccagggagcagccctcctcttgggaagtatagata-------------ggaaatggt--ttttagaaatttaaacgtgccagactc--aattaatctttcctaaacccagacaaggtagtatctcagggaaagcctgtctatatcaatgcggattttctctacaaatgcaaatct-ccccaacaaacacagcttttcagctattcttgtagaagaagctatttccagtcttctgagtagccatcttgaaatatgtcaaaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133468484 272 - 185818997 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctccccttgggaagaatagata-------------gcaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatgttgaaatatgtcaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298165 272 + 192294377 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctccccttgggaagaatagata-------------gcaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatcttgaaatatgtcaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780080 272 + 3123512 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctctccttgggaagaataggta-------------gcaaatgat--ttttagaactttaaacgtgtcagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatcttgaaatatgtcaaaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500648 272 + 10077455 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctccccttgggaagaatagata-------------ggaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcttagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgaggagccatcttgaaatatgtcaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706722 272 + 127223203 aggtggt----cttgttatgtggatgaaacttcacagggagcagccctccccttgggaagaataggta-------------ggagatggt--ttttagacctttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgtagattttctctacaaatgcaaatct-ccccaacaaagctaggttttcagctgttcttgtagaagaagctatttcctgtcttccgagtagccatcttgaaatatgtcaaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166931 272 - 1799296 aggtggt----cttgttatgtggatgaaacttcacagggagcagctctccccttgggaagaatagata-------------ggaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcactgcagattttctctacaaatgcaaatct-ccccaacaaagctagattttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatcttgagatatgtcaaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750547 272 + 6934359 aggtggt----cttgttacgtggatggaacttcacagggagcagccctccccttgggaagaatacata-------------ggagatggt--ttttagacctttaaacgtgccagactc-aagttaatctttcctagacccaaacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctattccctgtcttccgagtagccatcttgaaatatgtcaaaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109964 270 - 128169293 aggtggt----cttgttatgtgtatgaagcctcacagagagcagcccaccccttgggaagaatagatg-------------ggaaatggt--ttttagacctttataggtgccaaactc--agttaatcttccctagacacagacaaaggagtatctcagggaaagcctgtctataacaatgcagattttctctacaaatgcaaatct-ccccaacaaagacagcttttcagctacacttgtagaagaagctgttt-cggtcttgtgagtagccatcttgaaatatgtcaaat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727482 268 - 18371965 agggggt----cttgccatgtgtatgaagcctcacagggagcagccctccccttggaaagaatagatg-------------ggaaatgg---ttttagacctttaaaggtgccaaactc--agttaatctttcctagacccagataagggagtatctcaggcaaagcctgtctttatcaaaacagattttc-ctgcaaatgcaaatct-cgccaacaaagacagcttttcagctactcttgtggaagaagctgttt-ctgtcctctgagtagccatcttgaaacatgtcaaaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387169 270 + 3566421 aagtggt----cttgttatgtgtatgaagcctcacagggagcagccctccccttgggaagaacagatg-------------gaaaacggt--ttttagacctttaaaggtgccaaactc--agttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaagacagcttttcatcttctcttgtagaagaagctgttt-tggtcttctgtgtagccatcttgaaatatgtcaaaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1888977 269 - 9267652 agatggt----cttgttatgtgtatgaagcctcacagggagcagccctcccctt-gaaagaacagatg-------------ggaagtggt--ttttagacctttaaatgtgccaaactc--ggttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaagacagcatttcagctactcttgtagaagaagctgttt-gggtcatctgagtagccatcttgaaatacgtcaaaa i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12743709 261 + 14340318 aggtggttggccttgttatatggatgaaacctcgtagtcgg-agccctc------ggagtgcaggacg-------------gcacctgctcctgtcagacctttaaaggtgtcagactctcagctattctttcccacaacaagac-aggaagtgtctcagagaaagcctggctacatcaatgaagaatttctc-acagatacaaacctgccctataaaagacagctttccagctgttctagga----------ttgccagcgctctgaatagccaccttgaaatatgtcaaaa i otoGar3.GL873564 C 0 C 0 a score=2351163.000000 s hg38.chrUn_KI270746v1 3685 281 + 66486 agctggcc--------aggcgcacacctgtaatcccagcactttgggaggctgaag------tgggaggatcacctgaagtcaggagttggagaccagcctgaccaacatagtgaaaccccgtctctactaaatacaaaaaattagccgagtgtggtggtgcaggcctctaatctcagctacttgggaggctgagctaggagaactacttgaacct-gggaggctgaggttgcagtgagccaagattgtgccattgcactctagcctgggcaataaaagcaaaactccatct----------aaaa s panTro5.chr2A 90264157 282 + 111504155 agctgccc--------aggcgaacacctgtagtcccagcattttgggagactgaag------tgggtaggtcacctgaagtcaggagttggagaccagcctgaccgacatggggaaaccccgtctctactaaatacaaaaaattagccgagtgtggtggtgcatgcctgtaatctcagctacttgggaggctgagctaggagaattacttgaccct-gggaggctgaggttgcagtgagccaagattgtgccattgcacttcagcctgggcaataaaagcagaactccatctc---------aaaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108517782 283 - 162613886 agttggcc--------aggtgcaggcctgtaatctcagcactttgggaggctgaaa------tgggtagatcacctgaggtcaggagttcgaggccagcctgacaaacatggtgaaaccccgtctctgctaaatacaaaaaattagccgagtgtggtggtgcatgcctgtaatctcagctacttgggaggctgaggcaggagaattacttgaccct-gggaggctgaggttgcagtgagccaagattgtgccattgcactctagcctgggcaataaaagcaaaactccatctc--------aaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 126888 280 + 150013 agctggcc--------aggcgcacacctgtaatcccagcactttgggaggctgaag------tgggtagatcacctgaagtca-gagttggagaccagcctgaccaacatggtgaaaccccgtctctactaaatacaaaaaattagccgagtgtggtggtgcatgcctgtaatctcagctacttgggaggctgagctaggagaa-tacttgaccct-gggaggctgaggttgcagtgagccaagattgtgccattgcactctagcctgggcaataaaagcaaaactccatctc---------aaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 213066 284 + 1200634 agttggcc--------aggcgcacgcctgtaatcccagcactttgggaggctgaag------tgggtagatcacctgaagtcaggagttcgagaccagcctgaccaacatggtgaaacaccatgtctactaaatacaaaaaattagccgagtgtagtggcacatgcctgtaatctcagctacttgggaggctgagctaggagaattacttgaccct-gggaggctgaggttgcagtgagccaagattgtgccattgcactccagcctgggcaataaaagcaaaactccatctca-------aaaaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133468756 296 - 185818997 agttggccccgtgcagtggtgcacccctgtaatcccagcaccttgggaggctgagg------tgggtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagataagtatggcagcacatgcctgtaatcttagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgcaattgcactccagcctgggcaacaaaagcaaaactccgtctca-t---taaaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298437 296 + 192294377 agttggccccgtgcagtggtgcacccctgtaatcccagcaccttgggaggctgagg------tgggtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagataagtatggcagcacatgcctgtaatcttagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgcaattgcactccagcctgggcaacaaaagcaaaactccgtctca-t---aaaaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780352 296 + 3123512 agttggccccgtgcagtggtgcacccctgtaatcccagcaccttgggaggctgagg------tgagtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagataagtatggaagcacatgcctgtaatcttagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgcaattgcactccagcctgggcaacaaaagcaaaactccgtctca-t---aaaaaaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500920 299 + 10077455 agttggctccgtgcagtggtgcacccctgtaatcccagcaccttgggaggctgagg------tgggtggatcaccagaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagataagtatggcggcacatgcctgtaatcccagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgctattgcactccagcctgggcaacaaaagcaaaactccgtctca-taaaaaaaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706994 293 + 127223203 agttggccccgtgcagtggtgcacccctgtaatcccagcactttggaaggctgagg------tgggtggatcacctgaggtcaggagtttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagacaagtatggcggcacatgcctgtaatctcagctacttgggaggctgaggcaggaaaattgcttgactct-gggaggcagaggttgcagtgagctgagactgtgctattgcactccagcctgggcaacaaaagcaaaactccgtctca-t-----aaata i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167203 285 - 1799296 agttggcgcagtgca----------cgtgtaatcccagcaccttgggaggctgagg------tgggtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagataagtatggcgccacatgcctgtaatcttagctacttgggaggctgaggcaggagaattgcttgactctggggaggcagaggttgcagtgagctgagactgtgctattgcactccagcctggggaacaaaagcaaaactccgtctcatt-----aaaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750819 299 + 6934359 agttggccccgtacagtggtgcacccctgtaatcccagcacttggggaggctgagg------tgggtggatcatctgaggtaaggagtttgagatcagcctgaccaacatgatgaaaccccgtctccactaaatacaaaaaattagacaagtatggtggcacatgcctgtaatcttagctacttgggaggctgaggcaggagaattgcttgactctggggaggcagaggttgcagtgagctgagagtgtgctattgcactccagcctgggcaacaaaagcaaaactccttctca-taaaaaaaata i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110234 291 - 128169293 ggtgtgccgagtgcagcgg------tctgtaatcccagcactttgggaggcagaggccgagatgggtggatctcctgaggtcaggggttggagatctgcactaccaacatagtaaaaccctgcctctactaaatacaaagaatgagctaggcataatggtaaatgcctgtaatctcagctacttgagagtctgaggcaggagaatcccttgaa-ct-gggaggtggaggttgcagtgagctgaaattgtgccaatgcactccagcctggacaactagagcaaaactctgtctca-------aaaaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727750 292 - 18371965 ggtgtgccgggtgcagcag------cctgtaatcgcagcacttagggaggcagaggccgagatgggcagatctcctgaggtcaggagttcgaggccagccctaccaacatagtaaaaccctgcctctactaaatacaaagactgagccaggcatagtggtacacgcctgtagtctcagctacttgagagtctgaggcaggagaatccattgaacct-gggaggtggaggttgcagtgcgctgaaattgtgccactgcactccagcctgggcaaccagagcaaaactctgtctca-------aaaaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387439 291 + 3566421 ggtgtgcc-agtgcagtgg------cctgtaatcccagcacttcgggaggcagaggccgagatgggcggatctcctgaggtcaggagttcgagaccagccctaccaacatagtaaaaccctgcctctactaaatacaaagaatgagccaggcatagtggtacaagcctgtaatctcagctgcttgagagcctgaggcaggagaatccctcgaacct-gggaggtggaggttgcagtgagctgaaattgtgccactgcactccagcctgggcaactagagcaaaactccgtctca-------aaaaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1889246 292 - 9267652 ggtgtgcctggtgcagcgg------cctgtaatctcagcccttcaggaggcagaggccgagatgggtggatctcctgaggtcaggagttcgagaccagccctaccaacatagtaaaaccctgcctctactaaatacaaagaatgagccaggcatagtggtacatgcctgtaatctcagctacttgagagtctgaggcaggagaatcccttgaacct-gggaggtggaggttgcagtgagctgaaattgcgccactgcacttcagcctgggcaactagagcaaaacactgtctca-------aaaac i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12743970 0 + 14340318 C a score=926531.000000 s hg38.chrUn_KI270746v1 3966 107 + 66486 aaa----atg-tattttagggta--atattttgagtatctttaCCTCCATATGTAC----AATATTATTGTGATTTTTAAACTT-----TTCTGTGGAT-AAAACACAGGTGTGATTTCTAG----TG s panTro5.chr2A 90264439 111 + 111504155 aaa----atg-tattttagggta--atattttgagtatctttaCCTCCATATGTACAATAAATATTATTGTGATTTTTAATCTT-----TGCTGTGGAG-AAAACACAGGTGTGATTTCTAG----TG i panTro5.chr2A C 0 C 0 s panPan2.chr7 108518065 111 - 162613886 aaa----atg-tattttagggta--atattttaagtatctttaCCTCCATATGTACAGTAAATATTATTGTGATTTTTAATCTT-----TTCTGTGGAG-AAAAAACAGGTGTGATTTCTAG----TG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 127168 111 + 150013 aaa----atg-tattttagggta--atattttgagtatctttaCCTCCATATGTACAATAAATATTATTGTGATTTTTAATCTT-----TTCTGTGGAG-AAAACACAGGTGTGATTTCTAG----TG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 213350 116 + 1200634 aaa----atg-tattttagggta--atattttgagtatctttaCCTCCATATGTACAATAAATATTATTGTGATTTTTAATCTTTACTCTTCTGTGGAG-AAAACACAGGTGTGATTTCTAG----TG i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133469052 115 - 185818997 aaa----atg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAATCTTTACTCTTGTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298733 115 + 192294377 aaa----atg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAATCTTTACTCTTGTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780648 115 + 3123512 aaa----atg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAATCTTTACTCTTGTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501219 115 + 10077455 aaa----atg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAATCTTTACTCTTCTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707287 117 + 127223203 aca----atg-tattttagggta--atattttgagtttgtttaCCTCCATATATACAATAACTACTATTATGATTTTTAATCTTTACTCTTCTGTGGAGGAAAAAACAGGTGTGACTTCTAG----TG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167488 115 - 1799296 aaa----atg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAATCTTTACTCTTCTGTGGAGAAAAAAACAGGTGTGATTTCTAG----TG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751118 117 + 6934359 aaa----atg-cattttagggta--atattttgagtttgtttaCCTCCATATGTACAATAACTGTTATTATGATTTTTAACCTTTACTCTTCTGTGGAGAAAAAAACCGGCGTGATTTCTAG----TG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110525 115 - 128169293 aaa-----ag-tattttagggtaaaatattttgggtttctttaCCTCCATACGTACATTAACTACTATTGTAACTTTTAATTTTTACTCTTCTGTAGAG-AAAAAACAGGTGTGATTTCTAG------ i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728042 120 - 18371965 aaagggaggg-tattttagggtaaaatattttgggtttctttaCCTCCATATGTACATTAACCATTATGATGACTTTTAATCTTTACTCTTCTGTAGAG-AAAAAATAGGTGTGATTTCTAG------ i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387730 123 + 3566421 aaaaaaaaagttattttagggtaaaatattttgggtttctttaCCTCCATACGTACATTAACTATTATTGTAACTTTTAATCTTTACTCTTCTGTAGAG-AAAAAACAGGTGTGATTTCTAGTG---- i cebCap1.NW_016107540v1 C 0 I 246 s aotNan1.NW_018514471v1 1889538 118 - 9267652 aaa----ggg-tattttagggtaaaatattgtgggtttcttTGCCTCCATACGTACAttaactattattgtaacttttaatctttacttttCTGTAGTG-AAAACACAGGTGTGATTTCTAG--TG-- i aotNan1.NW_018514471v1 C 0 I 243 s otoGar3.GL873564 12743970 98 + 14340318 aaa----gta-tatttgtgagtgaaatagttagtttgcattcaTCTCCATGCCAACAATGAATG---------------------GCCATTGTGTGAGAAAAGACATGGGCGTGATTTCTGG----TG i otoGar3.GL873564 C 0 C 0 a score=823989.000000 s hg38.chrUn_KI270746v1 4073 169 + 66486 TAGCTGAACAT------CGTTTATTTGACAATATTGCACTtgtgtgtgggtgtgtgc--gtgt---------gtAGCTACTCTTTAATTT---------------TGTTCTCAC---ATGATT----A------GATATTAACAATT----CAGT-AAAATGTATGTTTTGCAATAT-TTCTCCATG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATCATGCCCC s panTro5.chr2A 90264550 172 + 111504155 TAGCTGAACAT------CATTTATTTGACAATATTGCACTTGTGTGTGGGTGTGTGC--CTGT---------GTAGCTACTCTTTAATTT---------------TGTTCTCACATAATGATT----A------GATATTAGCAATT----CAGT-AAAATGTATGTTTTGCAATAT-TTCTCCATG--TTGTTA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATCATGCCTC i panTro5.chr2A C 0 C 0 s panPan2.chr7 108518176 176 - 162613886 TAGCTGAACAT----CACGTTTATCTGACAATATTGCACTTGTGTGTGTG----------TGT---------GTAGCTACTCCTTACTTT---------------TGTTCTCACTTAATGATT----AAATAAGAATATTAAGAATTAATACAGT-AAAATGTATATTTTCCAATAT-TTCTCCATG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATCATGCCAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 127279 175 + 150013 TAGCTGAACAT------CATTTATTTGACAATATTGCACTTGTGTGTGGGTGTGTGC---TGT---------GTAGCTACTCTTTAATTT---------------TGTTCTCACATAATGATT----A------GATATTAACAATTAATTCAGT-AAAATGTATGTTTTGCAATAT-TTCTCCATG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATCATGCCCC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 213466 181 + 1200634 TAGCTGAACATC--ACATGTTTATTTGACAATATTGCACTtgtgtgcgggtgtgtgt-tgtgt---------gtAGCTACTCTTTACCTT---------------TGTTCTCACGTAATGATT----A------AATATTAAGAATTAATTCAGC-AAAATGTATGTTTTGCAATAT-TTCTCCATG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATCATGCCCC i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133469167 179 - 185818997 TAGCTGAACATC--ATGTATTTATTTGACAATATTGCACTTGTGTGTG------------TGT---------GTAGCTACTCTTTATCTGC----AAAGAATTGATGTTCTCATTTAATGATT----AAATAAGAATATTAACCATTAATACAGTAAAAATGTATATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCT-----TTAG--TTTAATTATACCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298848 179 + 192294377 TAGCTGAACATC--ATGTATTTATTTGACAATATTGCACTTGTGTGTG------------TGT---------GTAGCTACTCTTTATCTGC----AAAGAATTGATGTTCTCACTTAATGATT----AAATAAGAATATTAACCATTAATACAGTAAAAATGTATATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCT-----TTAG--TTTAATTATACCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780763 179 + 3123512 TAGCTGAACATC--ATGTATTTATTTGACAATATTGCACTTGTGTGTG------------TGT---------GTAGCTACTCTTTATCTGC----AAAGAATTGATGTTCTCACTTAATGATT----AAATAAGAATATTAACCATTAATACAGTAAAAATGTATATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCT-----TTAG--TTTAATTATACCAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501334 184 + 10077455 TAGCTGAACATC--ATGTATTTATTTGACAATATTGCACTTGTGTGTG------------TGT---------GTAGCTACTCTTTATCTGC----AAAGAATTGATGTTCTCACTTAACGATT----AAATAAGAATATTAACCATTAATACAGTAAAAATGTACATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATTATGCCAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707404 184 + 127223203 TAGCTGAATATC--ATGTATTTACTTGACAATACTGCACTTGTGTGTG------------TGT---------GTAGCTACTCCTTACCTGC----AAAGAATTGATGTTCTCACTTAATGATT----AAATAAGAATATTAACCATTAATACAGTAAAAATGTATATTTTGCAGTAT-TTCTCGATG------GA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATTATGCCAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167603 184 - 1799296 TAGCTGAACATC--ATGTATTTATTTGACAGTATTGCACTTGTGTGTG------------TGT---------GTAGCTACTCTTTACCTGC----AAAGAATTGATGTTCTCACTTAATGATT----AAATAAGAATATTAACCATTAATGCAGTAAAAATGTATATTTTGTAATAT-TTCTTGATG------GA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATTATGCCAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751235 184 + 6934359 TAGCTGAACATC--ATGTATTTATTTGACAATATTGCACTTGTACGTG------------TGT---------GTAGCTACTCTTTACCTGC----AAAGAACTGATGTTCTCACTTAATGATT----AAATAAGAATATTAACCATTAATGCGGTAAAAATGTACATTTTGCAATAT-TTCTCGATG------AA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATTATGCCAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110640 238 - 128169293 ----TGAACATC--ACA---TTGTTTGACCACATTGCACTTGTATGTG------------TGT---------ATAGCTACTCATTACCTACGTGTAAAGACTTGATGTTCTTACTGAATGATT----AAAT---AATATTAACC---AATATCAT-AAAATGTATATTTTGCAGTAT-TTATTATTA------TATGCTTATAATGTGtaatatatttaatataaattataatatataatatatgattatagattataattaatttgtttctaattagtatttaat-------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728162 176 - 18371965 ----TGAACATC--ACA---TTATTTGACCACATGGCACGTGTGTGTG------------TAT-------------------GTTACCTACCTGTAAAGACTTGATGTTCTCACTGAATGAGT----AAATAAGAACATTAACCAATAATATCAT-AAAATGTATA-TTTGCAGtat-ttattatta------ta---ttataatgtgtga------------------------------------------------------tgtttttatttagtatttatt-------- i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12744068 216 + 14340318 TGGTTAAATGTCTTCCGTGCTTATTTACCCATATCTCTCATGTGTGTGTGCACATGCATTTGTAGTTTTGCTGTGACTATTTTTTACCTAC---TTAAGACCAGATATTCTCACTTAATGATTTATGAAATAA-AAAATTAACTGTTAACACTAT-AAAATGTGTATTTTTCCATATACTTTAGATAACTAATTG----------------------------------------------------------------------TATTTTAA-TTGG--CTTAATTATGCAGC i otoGar3.GL873564 C 0 C 0 e aotNan1.NW_018514471v1 1889656 243 - 9267652 I e cebCap1.NW_016107540v1 1387853 246 + 3566421 I a score=264113.000000 s hg38.chrUn_KI270746v1 4242 28 + 66486 TATAATGTGTACATTTTAACCTTTGACT s panTro5.chr2A 90264722 28 + 111504155 TATAATGTGTACATTTTAACCTTTGACT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108518352 28 - 162613886 TATTACGTGTACATTTTATCCTTTTACT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 127454 28 + 150013 TATAATGTGTACATTTTAACCTTTGACT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 213647 28 + 1200634 TATAATGTGTACATTTTAATCTTTTACT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133469346 28 - 185818997 TATAATGTGTACATTTTAACCATTTACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299027 28 + 192294377 TATAATGTGTACATTTTAACCATTTACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780942 28 + 3123512 TATAATGTGTACATTTTAACCATTTACT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501518 28 + 10077455 TATAATGTGTACATTTTAACCATTTACT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707588 28 + 127223203 TATAATGCGTACATTTTAACCGTTTACT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167787 28 - 1799296 TATAATGTGTACATTTTAACCATTTACT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751419 28 + 6934359 TGTAATGTGTGCATTTTAACCTTTTACT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110878 28 - 128169293 tataatGTGTACATTTTAGGCTTTTACT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728338 28 - 18371965 ttttatgtttatattttaGGCTTTTACT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388099 28 + 3566421 tataatGTGTACATTTTAGGCTTTTACT i cebCap1.NW_016107540v1 I 246 C 0 s aotNan1.NW_018514471v1 1889899 28 - 9267652 tataatgtgtacattttaGGCTTTTACT i aotNan1.NW_018514471v1 I 243 C 0 s otoGar3.GL873564 12744284 27 + 14340318 -ACACTGCATGTATTTTAAACTTTAATT i otoGar3.GL873564 C 0 I 2330 a score=89645.000000 s hg38.chrUn_KI270746v1 4270 11 + 66486 ATTGGTCTCAA s panTro5.chr2A 90264750 11 + 111504155 ATAGGTCTCAA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108518380 11 - 162613886 ATAGGTCTCAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 127482 11 + 150013 ATAGGTCTCAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 213675 11 + 1200634 ATAGGTCTCAA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133469374 11 - 185818997 ACAGCTCTCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299055 11 + 192294377 ACAGCTCTCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780970 11 + 3123512 ACAGCTCTCAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501546 11 + 10077455 ACAGCTCTCAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707616 11 + 127223203 ACAGCTCTCAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167815 11 - 1799296 ATAGCTCTCAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751447 11 + 6934359 ACAGCTCTCAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110906 11 - 128169293 ATATCTCTCAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728366 11 - 18371965 ATGTCTCTCAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388127 11 + 3566421 ATATCTCTCAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1889927 11 - 9267652 ATATCTCTCAA i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12744311 2330 + 14340318 I a score=2345396.000000 s hg38.chrUn_KI270746v1 4281 246 + 66486 TCTTACTTTGGTTCCTGTATTTGAATTTACGCTAATAAAGTCCTACAGCTAAAATAGATTATATAAAC--TTATCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATGAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATCTAAATTTGTAATTTTCTTATAAA-TATTACATAATTATTTTGGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCATTAT s panTro5.chr2A 90264761 246 + 111504155 TCTTACTTTGGTTCCTGTATTTGAATTTATGCTAATAAAGTCCTACAGCTAAAAAAGATGATATAAAC--TAATCTACATTTTTACTGGTATTCTGGTGTTACTTTA---AATTATGTAATGAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATCTAAATTTTTAATTTTATTATAAA-TATTACATAATTATTTCTGAACCATATGTTGACTAATCTGCCCTTTATATGATGTGCATTAC i panTro5.chr2A C 0 C 0 s panPan2.chr7 108518391 249 - 162613886 TCTTACTTTGGTTCCTGTATTTGAATTCATGTTAATAAAGTCCTACAGATAAAAAGGATTACACAAAC--TTATCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATCTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAATCATATATTCACTAATCTGCCCTTTATATGATGTTCATTAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 127493 245 + 150013 TCTTACTTTGGTTCCTGTATTTGAATTTATGCTAATAAAGTCCTACAGCTAAAATAGATTATATAAAC--TTATCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATGAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAA-TTGGATTATTG---TTATCTGAGTTAAGGATCTAAATTTTTAATTTTCTTATAAA-TATTACATAATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCATTAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 213686 243 + 1200634 TCTTACTTTGGTTCCTGTATTTGAATTTATGCTAATAAAGTCCTTCAGCTAAAAAGGATTATATAAAC--TTATCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGG---ATTG---TTATCTGAGTTAAGGATCTAAATTTTTAATTTTCTTACTAA-TATTACATAATTATTTCTGAACCGTATATTGACTAATCTGCCCTTTATATGATGTGCATTAT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133469385 245 - 185818997 TCTTACTTTT-CTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299066 246 + 192294377 TCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780981 246 + 3123512 TCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501557 249 + 10077455 TCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707627 249 + 127223203 TCTTACTTTTGCTCGTGTATTTGAATTTATGCTAATACAGTCCTATGGCTAAAAAGGATTATATAAAC--TTACCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACAATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167826 249 - 1799296 TCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACCTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751458 248 + 6934359 TCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAT--TTACCTACATTCTTACTAGTATCCTGGTGTCATTTT----AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGAATTAAATTTTTAATTTTCTCATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110917 250 - 128169293 TCTTATTTTGGTTCTTGTATTTGAAATTATGCTAAGAAAGTCCTACAGCTAAAAAGGATTATGTAAAC--TTATCTACATTTTTAGTAGTTTTCTGATGTCATTTTT---AATTACATAATTAAATCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGGTTATTGTTATTATCTGAGTTAAGTCTCTAAATTTTTAATTTTCTTATAAAGTATTACATGATTATTTCTGCACCATATATTGACTAACCTGCCCTTTATACGAAGTGCATTAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728377 250 - 18371965 TCTTATTTTGGTTCCTGTATTTGAATTTATGCTAAGAGAGTCCTACAGCTAAAAAGGATAATGTAAAC--TTATCGACATTTTTAGTAGTTTTCTGATGTCATTTTT---AATTACATAATGAAATCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTAATTTGGGGTATTGTTATTATCTCAGTTAAGGCTCTAAATTGTTAATTTTCTTATAAACTATTACATGATTATTTCTGCACCATATATTGACTAATCTGTTCTTTATATGAAGTGCATTAT i saiBol1.JH378145 C 0 I 195 s cebCap1.NW_016107540v1 1388138 249 + 3566421 TCTTA-TTTGGTTCCCGTATTTGAATTTATGCTAAGAAAGTCCTACAGCTAAAAAGGATTATGTAAAC--TTATCTATATTTTTGGTAGTTTTCTGATGTCTTTTTT---AATTACATAATTAAATCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGGTTATTGTTATTATCTGAGTTAAGGCTCTAAATTTTTGATTTTCTTATAAAGTATTACATGATTATTTCTGCACCATATATTGACTAACCTGTCCTTTATACAAAGTGCATTAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1889938 250 - 9267652 TCTTATTTTGGTTCCTGTATTTGAATTTATGCTAAGAAAGTCCTACAGCTAAAAAGGATTATGTAAAC--TCATCTACATTTTTAGTAGTTTTCTGATGTCATTGTT---AATTACATAATTAAATCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGCTCTAAATTTTTAATTTTCTTATAAAGAATTACATGATTATTTCTGCACTATATATTGACTAACCTGCCCTTTATATGAAGTGCATTAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12746641 429 + 14340318 TTTTATTTTGTCTTCCATTTTTGAACATATGCTAATAAAGTTTTATGGCTACAAAGTATTATATGAACTATTGTTTGTATT-TTAGTAGTTTTCTGa----attttatataattatataattaaatGCATTTTCAAAAttttttaaattttatagacagctctcactctgttgctcagactacagataaaaatcagtacagtggcatgattattgcttattgtaactttgaaatcctgggatcaagaaatcttcctgaactcagtctcctaaagttctaggagtttacattctaagagtcagccactgcactcagcCATTTTAATTTGGATTATTGTTATTATATGGGGTAAGGTTCTAAATTAT---TTTCCTTATAAA---TTATCATTTTATTCCTAGACC--ACAATGACTAATCTGCCTTTTACATG-TCTGCATTAT i otoGar3.GL873564 I 2330 C 0 a score=2019784.000000 s hg38.chrUn_KI270746v1 4527 211 + 66486 AAGAGCTTGGGATTGTTTCATTTGCAAAGATGAATGCTTGAGAAGTAGATATTTAACCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAAATAGCCTATAGGTTGAAAAACTCCTGTAGTGA---AGAAAGAAAATAAGTAATATACAGTGACAATATAAATATTATAAGTA------TTTA-----TTTTATTATCGCCCTGAAATTTGATaatgc s panTro5.chr2A 90265007 211 + 111504155 AAGAGCTTGGGATTGTTTTATTTGCAAAGATGAATGCTTGAGAAGTAGATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAAATAGCCTATAGGTTGAAAAACTCCTGTAGTGA---AGAAAGAAAATAACTAATATACAGTGACAATATAAATATTATAAGTA------TTTA-----TTTTATTATCACCCTGAAATTTGATAATAC i panTro5.chr2A C 0 C 0 s panPan2.chr7 108518640 208 - 162613886 AAGAGCTTGGGATTGATTCATCTGCAAAGATGAATGCTTGAGAAGTAGATATTTCATCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAACTTGTCTATAGGCTAAAAAACTCCTATAGTGA---AAAAAGAAAATAACTAATATACAGTGACAATATAAA---TAGAAGTA------TTTA-----TTTTATTATTGCCCTGAAATTTGGAAATAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 127738 211 + 150013 AAGAGCTTGGGATTGTTTCATTTGCAAAGATGAATGCTTGAGAAGTAGATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAAATAGCCTATAGGTTGAAAAACTCCTGTAATGA---AGAAAGGAAATAACTAATATACAGTGACAATATAAATATTATAAGTA------TTTA-----TTTTATTATCGCCCTGAAACTTGATAATAC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 213929 211 + 1200634 AAGAGCTTGGGATTGATTCATTTGCAAAGACGAATGCTTGAGAAGTAGATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAAATAGCCTATAGGTTGAAAAACTCCTGTAGTGA---AGAAAGAAAATAACTAACACACAGTGACAATATAAATATTATAAGTA------TTTA-----TTTTATTATTGCCCTGAAATTTGATAATAC i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133469630 211 - 185818997 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATACTTGAGAAGTAGATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGTGA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----TTTTATTATTGCCCTGAAATTTGATAATAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299312 211 + 192294377 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATACTTGAGAAGTAGATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGTGA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----TTTTATTATTGCCCTGAAATTTGATAATAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781227 211 + 3123512 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAGATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGTGA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----TTTTATTATTGCCCTGAAATTTGATAATAC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501806 206 + 10077455 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAGATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGTGA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGTA----------------TTTATTATTGCCCTGAAATTTGATAATAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707876 211 + 127223203 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAGATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGTGA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----TTTTATTATTGCCCTGAAATTTGATAATAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168075 211 - 1799296 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAGATAGTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGTGA---AAAAAGAAAATAACTAATATACAGTGACAGTATAAATAGTAGAAGTG------TTTA-----TTTTATTATTGTCCTGAAATTTGATAATAC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751706 211 + 6934359 AAGAGATTAAGATTGATTCATTTGCAAAGATGAATGTTTGAGAAGCAGATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTGAAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGTGA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGAA------TTCA-----TTTTATTATTGCCCTGAAATTTGATAATAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111167 204 - 128169293 AAGAACTTGAAATTGATTCATTTGCAAAGATGAACACTTGAGAAGTAGATATTTAATCATAACATTTCAA------------AACCTAGTATTGAAAAATAGCCTATAGGCCGAAAATTTCCTGTAGCAA---AAAAAGAAAATAACTAATATGTAGTGACAATATAAATATTAGAAGTA------TTTATTTTGTTTTATTATTGCCCTGAAATTTGACAATAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728822 193 - 18371965 aaGAACTTGGGATTGATTCATTTGCAAAGAAGAACACTTG------AGATGTTTAATCATAACATTTCAA------------AACCTAGAATTGAAAAATAGCTTGTAGGTTGAAAATGTCCTGTAGTGA---AAAAAGAAAATATCTAATATGTAGTGACAATATAAATATTAGAAGTA------TTTA-----TTTTATTATCGCCCTGAAATTTGATAATAC i saiBol1.JH378145 I 195 C 0 s cebCap1.NW_016107540v1 1388387 199 + 3566421 AAGAACTTGGGACTGATTCATTTGCAAAGATGAACACTTGGGAAGTAGATATTTAATCATAACATTTCAA------------AACCTAGAATTGAAAAATAGCCTATAGGTTGAAAATTTCCTGTAGCAA---AAAAAGAAAATAACTAATATGTAGTGATAATATAAAT-----AAGTA------TTTATTTTATTTTATTATTGCCCTGAAATTTGACAATAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890188 204 - 9267652 AAGAACTTGGGATTGATTCATTTACAAAGATGAACACTTGAGAAGTAGAAATTTAATCATAACATTTCAA------------AACCTAGAATTGAAAAATAGCCTATAAGTTGAAAATTTCCTGTAGCGA---AAAAAGAAAATAACTAATATGTCGTGACAATATAAATATTAGAAGTA------TTTATTTTATTTTATTATTGCCCTGAAATTTGACAATAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12747070 203 + 14340318 -AAGATCAGGGAATAATTCATTTGCAAATATGAAAATATGAATA--AAATATGTCATCATAACATCT------------AATAACCCAGAAATGAAAACAAGC--ATAGGTTGGAAAATTCCTATAGTAAAATAAAGAGAAAATATTAATCATATAGGAATACtataaatatcaaaaattaattatttca-----ttttataattGTTCTGAAATTTGAGAATAC i otoGar3.GL873564 C 0 I 582 a score=11553.000000 s hg38.chrUn_KI270746v1 4738 2 + 66486 aa s panTro5.chr2A 90265218 2 + 111504155 AA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108518848 2 - 162613886 AA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 127949 2 + 150013 AA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 214140 2 + 1200634 AA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133469841 2 - 185818997 AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299523 2 + 192294377 AA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781438 2 + 3123512 AA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2502012 2 + 10077455 AA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708087 2 + 127223203 AA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168286 2 - 1799296 AA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751917 2 + 6934359 AA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111371 2 - 128169293 AC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 729015 2 - 18371965 AC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388586 2 + 3566421 AC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890392 2 - 9267652 AT i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12747273 582 + 14340318 I a score=5436985.000000 s hg38.chrUn_KI270746v1 4740 562 + 66486 acatgtaatatcta-catatcatccatatatcaggtcataaaaaatca--atacattcttcaaaaatttagcataacggaaaatgcactctctctccttgatggaattaagttacaaataaaagta-aaaataagtagataagtagatggaagtagatgtttaaaaaCAATGAAAACTATTTGTTTTGGATAACATAAAATCTCAATTGACAATTCCAATGTTTCCAGAACTTTGCCTGtcaactggtggagagttttcc-ccaggagacatttgtcaatgtctag-ggttattgtggggatgtcaagactggtggaggtgtg---aaatt-------tagaggtcaaacgaaacacctagcattgctagggcagcctcccacaacaaagaatcctctggtcctaaaggtaagtagcaccaaggttgagaaaccATAATCTAGACAGTAAACACTACGTAGCTATTCCAAGTGCTCAGGAAAACACATCAGTGCCCTCGAGGGGAAAAGTGTAAACATTTTAATTGCTGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGGG------------------------------------------------------------------------GCtgaa s panTro5.chr2A 90265220 562 + 111504155 ACATGTAATATCTA-CACATCATCCATATATCAGGTCAGAAAAAATCA--ATACATTCTTCAAAAATTTAGCATAACAGAAAATGCACTCTCTCTCCTTGATGGAATTAAGTTACCAATAAAAGTA-AAAATAAGTAGATAAGTAGATGAAAGTAGATGTTTAAAAACAAAGAAAAATATTTGTTTTGGATAACATAAAATCTCAATTGACAATTCCAATATTTCCAGAACTTTGCCTGtcaactggtggagagttttcc-ccaggagacatttgtcaatgtctag-ggttattgtggggatgtcaagactggtggaggtgtg---aaatt-------tagaggtcaaacgaaacacctagcattgctagggcagcctcccacaacaaagaatcctctggtcctaaaggtaagtagcaccaaggttgagaaaccATAATCTAGACAGTAAACACTACGTAGCTATTCCAAGTGCTCAGGAAAACACATCAGTGCCCTCGAGGGGAAAAGTGTGAACATTTTAATTGCTGTACATGGTGACACAAATCCATGT---------------tgttaatctcagtggaaggg------------------------------------------------------------------------gctgaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108518850 554 - 162613886 ACATGTAAGATCTA-CATATCATCCATATATCAGGTCATAAAAAATCA--CTACATTCTTGAAAAATTTAGCATAACAGAAAATGCACTCTCTATCCTTGATGGAGTTAAGTTACAAATAAAAGTA-A--------AGATAAGTAGATGGAAGTAGATGTTTAAAAACAAAGAAAAATATTTGTTTTGGATAACATAAAAACTCAGCTGACAATTCCAATATTTCAAGAACTTtggctgtcaactggtggagatttttcc-ccaggagacatttggcaacgtctag-ggttattgtggggatgtcaagactgctgggtgtgtg---aaatt-------tagaggtcaaatgaaacttctagcattgctagggcagcctcccacaacaaagaatcctctggtcctaaaggtaaatagcaccaaggttgagaaaccATAATCTAGAAAGTAAACACCATGTAGCTATTCGAAGTGCTCAGGAAAACACATCAATGCCCTCGAGGGGAAAAGTGTAAACATTTTAATTGCTGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGGG------------------------------------------------------------------------GCtgaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 127951 562 + 150013 ACATGTAATATCTA-CATATCATCCATATATCAGGTCATAAAAAATCA--ATACATTCTTCAAAAATTTAGCATAACAGAAAATGCACTCTCTCTCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTACATGTTTAAAAACAAAGAAAAATATTTGTTTTGGATAACATAAAATCTCAATTGACAATTCCAATATTTCCAGAACTTTGCCTGtcaactggtggagagttttcc-ccaggagacatttgtcaatgtctag-ggttattgtggggatgtcaagactggtggaggtgtg---aaatt-------tagaggtcaaacgaaacacctagcattgctagggcagcctccctcaacaaagaattctctggtcctaaaggtaagtagcaccaaggttgagaaaccATAATCTAGACAGTAAACACTACGTAGCTATTCCAAGTGCTCAGGAAAACACATCAATGCCCTCGAGGGGAAAAGTGTAAACATTTTAATTGCTGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGGG------------------------------------------------------------------------GCtgaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 214142 558 + 1200634 acatgtaatatcta-catatcatccatatatcaggtcataaaaaatca--atacattcttcaaaaatttagcataacagaaaatgcactctctctccttgatggaattaagttacaaataaaagta-aaaataagtagataagtagatggaagtagatgtttaaaaacaaagaaaaatatttGTTTTGGCTAACAT----TCTCAGTTGACAATTCCAATATTTCAAGAAGTTTGGCAGtcaactggtggcgagttttcc-ccaggagacatttggcaatgtctag-ggttattgtggggatgtcaagactggtggaggtgtg---aaatt-------tagaggtcaaacgaaacatctagcattgctagggcagcctcccacaacaaagaatcctctggtcctaaaagtaagtgacaccaaggttgagaaaccATAATCTAGAAAGTAAACACTATGTAGCTATTCCAAGTGCTCAGGAAAACACATCAATGCCCTCGAGGGGAAAAGTGTAAACATTTTAATTGCTGCACATGGTGGCACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgag i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133469843 557 - 185818997 ACATGTAATACCTA-CATATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAAATTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagactggtgggcgtgtg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcctcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299525 557 + 192294377 ACATGTAATACCTA-CATATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAAATTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagactggtgggcgtgtg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcctcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781440 557 + 3123512 ACATGTAATACCTA-CATATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAAATTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagactggtgggcgtgtg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcctcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2502014 629 + 10077455 ACATGTAATATCTA-CGTATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAATTTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATCAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATATCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagactggtgggcgtgtg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcttcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACATATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAGGCTGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGTTGTTAATCTAAGTGGAAGACGCtgaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708089 558 + 127223203 ATATGTAATGTCTA-CGTATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAATTTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATCAAGTTACAAATAGAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGGAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTTAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctagaagttattgtggggatgtcaagactggtgagcatgtg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcctcccacaacaaataatcctgtggtcctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCTGTACATGGTAACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168288 557 - 1799296 ACATGTAATACCTA-CATATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAATTTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTACATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagactggtgggcgtgtg---aaatt-------tggaggtcaaatgaaccatctagcattgctagggcagcttcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAAGGTAGCTACTCGAAGTGCTCAGCAAAACACATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCTGAA i manLeu1.NW_012105809v1 C 0 I 6408 s colAng1.NW_012115910v1 1751919 557 + 6934359 ACATGTAATATCTA-CATATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAATTTAACATAACAGAAAATGCA----CTATCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTGTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttattgtggggatgtcaagactggtgggcgtatg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcctcccacaacaaataatcctctggttctaaaagtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGGAAAATTGTAAACATTTTAATTGCTGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCTGAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111373 561 - 128169293 ACATGTAATATATA-CATATTACCCATATATTAGCTCATAAAAAA-CA--ATACATTCTTGAAAAATTTAGCATGACAGAAAATGCACTTTCTATCCTTGATGCAATGAAGTTACAAATAAAAGTA-AAAATAAGTACAGAAGTAGATTGAAGTAGATGTTT-AAAATAAAGAAAAATATTTGTTTTGGATAACATAAATACTCAATTGATAATTCCAATATTTCAAGCACTTtggctctcaactggtggagattcttcccccaggtgacatttggcaatgtctag-agttatggtggggatgtcgagaatggtgggggtgtg---aaatt-------taggggtcaaacgaaacttctaacattgtcagggcaacttcccaccacgaagaatcctctggtcctaaaggtaaatagctccaaggttgaaaaaccATAATCTAGAAAATAAAAACCCTGTAGGCATTCAAAGTGCTCAGGAAAACACATCGATGCCCTTGAGGGAAAAATTGTAAACATTTTAATTGCTGTGCATAGTGCCAAAAATCCATGT---------------tgttggtctaagtggaagag------------------------------------------------------------------------gcttaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 729017 560 - 18371965 ACATGTAATAGATA-CATACTACCCATATATTAGCTCATAAAAA---A--ATACATTCTTGAAAAATTTAGCATGACAGAAAATGCACTTTCTATCCTTGATGCAATGAAGTTACAAATAAAAGTA-AAGATAAGTAGATAAATAGATTGAAGTAGATGTTTAAAAATAAAGAAAAATATTTGTTTTGGATAACATAAATGCTCAATTGACAATTCCAATATTTCAAGCACGTtggctctcaactggtggagattcttcctccaggagacatttggcaatgtctag-agttatggtggggatgtcaagactggtaggagtgtg---aaatt-------tagaggtcaaacaaaacttctaacattaccagggcaacttcccaccacaaagaatcctctggtcctaaaggtaaacagcaccaaggttttaaaaccATAATCTGGAAAAGAAAAACCGTGTAGGCATTCAAAGTACTCAGGAAAACACATCCATGCCCTCGAGGGGAAAAGTGTAAACATTTTAATTGTTGTTCATGGAGACACAAATCCATGT---------------TGTTGGTCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388588 560 + 3566421 ACATGTAATATATA-CGTATTACCCATATATTAGCACATTAAAAA--A--ATACATTCTTGAAAAATCTAGCATGACAGAAAATGCATTTTCTATCCTTGATGCAATGAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATTGAAGTAGATGTTTAAAAATAAAG-AAAATATTTGTTTTGGATAACATAAATACTCAATTGACAATTCCAATATTTCAAGCACTTtggctctgaactggtggagattcttcccccaggagacatttggcaatgtctag-agttatggtggggatgtcaagactggtgaggttgtg---aaatt-------tagaggtcaaacaaaacttctaacattgccagggcaacttcccaccacaaagaatcctctggtcctaaaggttaatagcaccaaggttcaaaaaccATAACCTAGAAAATAAAAACCTTGTAGGTGTTCAAAGCGCTCAGAAAAACACATCGATGCCCTGGAGGGGAAAAGTGTAAACATTTTAATTGCTGTGCATGGTGACACAAATCCATGT---------------TGTTGGTCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890394 553 - 9267652 ACATGTAATATATA-CATATTACCCATATATTAGCTCATAAAAAAACA--ATACACTCTTGAAAAATTTAGCATAACAGAAAATGCACTTTCTATCCTTGAAGCAATGAAGTTACAAATAAAAGTA-AAAATAAGTAGAT----------AAGTATATGTTTAAAAACAAAGAAAAATATTTGCTTTGGATAACATAAATACTCAATTGACAATTCCAATATTTCAAGCACTTtggctctcaactggtggagattcttcccccaggagacatttggcaatgtctag-agttatggtggggatgtcaagactggtgggggtgtg---aaatt-------tagaggtcaaacgaaacttctaacgttgccagggtgacttcccaccacaaagaatcctctggtcctaaaggtaaatagcaccaaggttgaaaaatcATAATCTAGAAAATAAAAACTATGAAGGCATTCCAAGTGCTCAGGAAAACACATAGATACCCTCGAGGGGAAAAGAGTAAACATTTTACTTGCTGTGCATGGCGACACAAATCCATGT---------------TGTTGGTCTAAGTGGAAGAG------------------------------------------------------------------------ACtgaa i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12747855 532 + 14340318 ACATGGAATGTCTGCCACATTATCCACAGATC-GTTCATAAGGAAACATCAGATGCTCTTGAAAAATCTAATATAGCTGAAAATACATTCTCTGTGCTTAGTGCCATGAACTTATAAATGGAAGTAGAAAATAAGTGGATAAGTGGATAGAAGTCCATGTTG-AAAACAGGAA-----ATTTATTTTGGATAACATAAAACCTCTCTCTATAATTAAAAAACATCAAAATTTgtgactctcaaatggtggat-tttatcc-gcagaagacattttgcaaagtgtag-agatactctggggttgtcaagacttgggcatgggtgcccaaatccagagggtagaggtcaggctcaacagccagcatgtgcaggaaaacctcccac--------------------------------------------aGAAACTGTAATCTACAAAATAAAAACTGTTCAGCTGTTTGAAATTCTTGGGAAAACACATCAACACGCACGTGGGGGAAAA-------ATTTTAATTGCTGTTTGTGGTTACATAAACCCATATGCACACATGACAtcaccctaaaataattgaaagga------------------------------------------------------------------------tcagag i otoGar3.GL873564 I 582 C 0 a score=700073.000000 s hg38.chrUn_KI270746v1 5302 71 + 66486 gcacaaaacgtaattcaaagagtttact-tgaaccacaa--tgaggaca-gctgcctggaagaaacagacccaag s panTro5.chr2A 90265782 69 + 111504155 gcacacaacgtaattcaaagagtttactgtgagccacaa--tgaggaca-gctgcctggaag-aacaga--caag i panTro5.chr2A C 0 C 0 s panPan2.chr7 108519404 71 - 162613886 gcacaaaacgtaattcaaagagattact-tgagccacag--tgaggaca-gctgcctggaagaaacagacccaag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 128513 71 + 150013 gcacaaaacgtaattcaaagagtttact-tgagccaaaa--tgaggaca-gctgcctggaagaaacagacccaag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 214700 71 + 1200634 gcacaaaacgtaattcaaagagtttact-tgagccaaaa--tgaggaca-gctgcctggaagaaacagacccaag i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133470400 71 - 185818997 gcacaaaacgtaattcaaagagtttacc-tgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300082 71 + 192294377 gcacaaaacgtaattcgaagagtttacc-tgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781997 71 + 3123512 gcacaaaacgtaattcaaagagtttacc-tgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2502643 71 + 10077455 gcacaaaacgtaattcaaagagtttact-tgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708647 71 + 127223203 gcacaaaacgtaattcaaagagtttact-tgagccaaaa--taaggaca-gctgcctggaagaaacagacccaag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175253 71 - 1799296 gcacaaaacgtaattcaaagagtttact-tgagccaaaa--taagggca-gttgcctggaagaaacagacccaag i manLeu1.NW_012105809v1 I 6408 C 0 s colAng1.NW_012115910v1 1752476 71 + 6934359 GCACAAAAAGTAATTCaaagagtttact-tgagccaaaa--taagctca-gctgcctggaagaaacagacccaag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111934 72 - 128169293 gcacaaaacataattcaaagagtttact-tgagccaaaa--tgaggacaggctgcttgtaagaaacagacccaag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 729577 72 - 18371965 gcacaaaacataattcaaagagtttact-tgagccaaaa--tgaggacaggctgcctgtaagaaacagacccaag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389148 72 + 3566421 gcacaaaacataattcaaagagtttacg-tgagccaaaa--tgaggacaggctgcctgtaagaaacagacccagg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890947 72 - 9267652 gcacaaaatgtaattcaaagagtttact-tgagccaaaa--tgaggacgggctgcctgtaagaaacagacccaag i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12748387 66 + 14340318 -------tcctggtttaatgagtttatt-cgagttaaaagctagaaatg-gccattcagaagtcacaagcttcag i otoGar3.GL873564 C 0 I 2362 a score=3543591.000000 s hg38.chrUn_KI270746v1 5373 366 + 66486 tatccttggatatgaactccctttggagctttgcaacaagcagtttcctaaaggg----ataaaagggtccagaagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacatttattagtgactggctatacactgttacactattattgggtgtggattatagtgtctggtgtggcgttattggttaatttatagctactgtggcaacagc-ggcagcttagatgaacacacagctcaaagaggagcaggacagaactgctgtctcatttgaatatctctctgggcctgattattt-aaaaggacttgcatttcacacatgaaagttattttcttttctcaA---TGTCCATAAA s panTro5.chr2A 90265851 366 + 111504155 tatccttgga-atgaactcccctttgagctttgcaacaagcagtttcttaaaggc----aaaaaagggtccagaagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacatttattagtgactggctatacactgttacactattatggggtgtggattatagtgtctggagtggcgttattggttaatttatagctactgtggcaacagcaagcagcctagatgaacacacagctcaaagaggagcaggacagaactgctgtctcatttgaatatctctctgggcctgattattt-aaaaggacttgcatttctcacatgaaagttattttcttttctcaA---TGTCCATAAA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108519475 367 - 162613886 tatccttggatataaactccatttggagctttgcaacaagcagtttcttaaaggc----aaaaaaggtacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattgccttatgggaataacattgattagtgactggctatacactgttaagctattattgggtgtggattatagtgtctggtgtggcattattggttaatttatagctactgtggcaacagcaagcagcctggatgaatacacagctcaaagaggagtagggcacaactgctgtctcattttaatatctctctgggcctgattattt-aaaaggacttgcatttctcacataaaagttactttcttttctcaA---TGTCAATAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 128584 365 + 150013 tatccttggacatgaactccctttggagctttgcaacaagcagtttcttaaaggg----a-aaaagggtccagaagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaat-acatttattagtgactggctatacactgttacactattattgggtgtggattatagtgtctggtgtggcgttattggttaatttatagctactgtggcaacagcaagcagcctagatgaacacacagctcaaagaggagcaggacagaactgctgtctcatttgaatatctctctgggcctgattattt-aaaaggacttacatttctcacatgaaagttattttcttttctcaA---TGTCCATAAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 214771 368 + 1200634 tgtccttggatatgaactccatttggagctttgcaacaagcagtttcttaaaggc----aaaaaagggacaagaagtgggatgatgcaaagaggttggtcacaaattctcattggcttatggaaataacatttattagtgactggctatacactattacactataattgggtgtggattatagtgtctggtgtgacattattagttaatttatagctactgtggcaatagcaagcagcctagatgaacacacagctcaaagaggagcaggacagaactgctgtctcattttaatatctctctgggcctgattatttaaaaaggacttgcatttctcacatgaaagttattttcttttctcaA---TGTCAATAAA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133470471 367 - 185818997 tattcttggatattaactccatttggagttttgcaacaagcagtttcttaaaggc----tgaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggctcatggaaataacattgattagtgactggctatacactgttatgctgttattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagttgggcacgactgctgtctcattttaatatctctctgggcctgattattt-aaaaggactagcatttctcacatagaagttattttattttctcaA---TGTCAATAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300153 367 + 192294377 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----tgaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggctcatggaaataacattgattagtgactggctatacactgttatgctgttgttgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagttgggcacgactgctgtctcattttagtatctctctgggcctgattattt-aaaaggactagcatttctcacatagaagttattttattttctcaA---TGTCAATAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782068 367 + 3123512 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----tgaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctgttattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagttgggcacgactgctgtctcattttaatatctctctgggcctgattattt-aaaaggactagcatttctcacatagaagttattttattttctcaA---TGTCAATAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2502714 367 + 10077455 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagtcgggcacgactgctgtctcattttaatatctctctgggcctgattattt-aaaaggactagcatttctcacataaaagttattttattttctcaA---TGTCAATAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708718 367 + 127223203 tattcttggatatgaactccatttggcgttttgcaacaagcaatttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggcttggcattattgattaatttatagctactgtggcaacctcaagcagcctagatgaatacacagctcaaagaggagtcaggcacgactgctgtctcattttaatatctctctgggcctgattattt-aaaaggacttgcatttctcacataaaagatattttattttctcaA---TGTCAATAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175324 367 - 1799296 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagagatttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagttgggcacgactgctgtctcattttaatatctctctgggcctgattattt-aaaaggactagcatttctcacataaaagttattttattttctcaA---TGTCAATAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1752547 367 + 6934359 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcactggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggcgtggcattattgattaatttatgactactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagtcgggcacgactgctgtctcattttactatctctctgggcctgattattt-aaaaggacttgcatttctcacataaaagttattttattttctcaT---TGTCAGTAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112006 367 - 128169293 tatccttggatatgaactccatttgcagctttactgaaagcaggttcttaaaggc----aaaaaggagacaaggagtggggtgatgcaaagatgtttgtcacaaattctcattggcttatggaaataacattgattagtgactgactatacactgttaagctattatagggtgtggattatagtgtctggtgtggcattattagttaatttatagctactgtggcaacagcaagcagcctggatgaatacacagctcaaagaggagtgggacctgacttctgtctcattttaatatcactctgggcctgattattt-gaaaggacttgcatttctcacataaaggttattttcttttctcaG---TGTCAATAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 729649 368 - 18371965 tacccttggatatgaactctgtttgcagctttgctacaaggaggttcttaaaagcaaaaaaaaaagggacaaggagtggggtaatgcaaa---gtttgtcagaaattctcattggcttacggaaatagcattgattagcgactggctatacactgtcaagctattataggatatggattatagtgtctggtgtggcattattggttaacttatagctactatggcaacagcaagcagcctggatgaatacacagctcaaagaggagtaggacctgacttcggtctcattttaatgtcactctaggcctgattattt-aaaaggacttgaatttctcacataaaagttattttcttttctcaA---TGTCAATAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389220 367 + 3566421 tatccttggatatgaactccgtttgcagcttggctacaagcaggctcttaaaggc----aaacaagggacaaggagtggggtgatgcaaagaggtttgtcagaaattctcattggcttatggaaatagcattgattagtgactggctatacactgttaagcta-catagggtatggattatagtgtctggggtgacattattggttaatttatagctactgtggcaacagcaagcaacctggatgaatacacagctcaaagaggagtaggacctgacgtctgtctcattttaatatcactctgggcctgattattt-aaaaggacttgcatttctcacat--atgttattttctttcctcaGACATGTCAATAAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891019 367 - 9267652 tatccttggatatgaactccatttgcagctttgctacaagcaggttcttaaaggc----aaaaaagggacaaggagtggggtgatgcaaagtggtttgtcagaaattctcattggcttacggaaataacattgattagtgactggctatacactgttaagctattatagggtgtggattatagtgtctggtgtggcattattggttaatttatagctactgtggcaacagcaagcagcctggatgaatacgcagctcaaagaggagcaggacctgacttctgtctcattttaatatcactctgggcctgattattt-aaaaggacttgcatttctcacataaaagttattttcttttttcaA---TGTCAATAAA i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12748453 2362 + 14340318 I a score=1852574.000000 s hg38.chrUn_KI270746v1 5739 184 + 66486 TGAGAATAAATAGAC-AT-AAATAGATCTTTTCGAGGATGAAGTAAATGGAATGAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATGGATTTTTCAAAGTG--ATTTTAAGCTATTAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCTGAgtatgggctaaa s panTro5.chr2A 90266217 181 + 111504155 TGAGAATAAATAGAT-GTAAAATAGATCTTTTCAAGGATGAAATAAATGGAATGAA----AAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATGGATTTTTCAAAGTG--ATTTTAAGCTATTAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCTGAGAATgggctaaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108519842 185 - 162613886 TGAGAATAAATAGAC-ATAAAATAGATCTTTTCCAAGATGAAGTAAATGGAGTAAAAAACAAAACCCTAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATTTTTCAAAGTG--ATGTTAAGCTATTAGGAATCAGTTAAATGTTGGCGGA-TTTTGTCTGAgtatgggctaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 128949 185 + 150013 TGAGAATAAATAGAC-ATAAAATAGATCTTTTCGAGGATGAAGTAAATGGAATGAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATGGATTTTTCAATGTG--ATTTTAAGCTATTAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCTGAgtatgggctaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 215139 182 + 1200634 TGAG---AAATCGAC-ATAAAATAGATCTTTTCGAAGATGAAGTAAATGGAATAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATGGATTTTTCAAAGTG--ATTTTAAGCTATTAGGAATCAGTTAAATGTTGGGAGA-TTTTGTCTGAAtatgggctaaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133470838 185 - 185818997 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCTGGgtatgggctaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300520 185 + 192294377 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAAGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCTGGgtatgggctaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782435 185 + 3123512 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCTGGgtatgggctaag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503081 185 + 10077455 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATATTAAGCTACCAGGAATCAGTTAAATGTTGGGGAA-TTTTGCCTGGgtatgggctaag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709085 185 + 127223203 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCTGGgtatgggctaag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175691 185 - 1799296 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATTAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATGATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATTATAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCTGGgtatgggctaag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1752914 185 + 6934359 TGAGAATAGATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGATTATAAATATATAGATTTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAACGTTGGGGGA-TTTTGCCTGGgtatgggctaag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112373 186 - 128169293 TGAAAATAAAGGGAC-AAAAAATAGATCTTTTCAAGGATGAGGTAAATGGAGTAATAAACAAAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGCTGTAAATATATAGATTTTCCAAAATG--ATATTAAGCTATCAGGAATCAGTTAAATGTTCGGGGATTTTTGCCTGGgtatgggttaag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730017 185 - 18371965 TGAAAATAAAGGGAC-AAAAAATAGATCTTTTTGAGGATGAAGTAAATGGAGTAATAAACAAAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGTTGTAAATATATAGATTTTCCAAAATG--ATATTAAGCTATCAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCTGGgtatgggttaag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389587 185 + 3566421 TGAAAATAAAGGGACAAAAAAATAGATCTTTTCGAGGATGAAGTAAATGGAGTAATAAAC-AAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGCTGTAAATATATAGATTTTCCAAAATG--ATATTAAGCTATCCGGAATCAGTTAAATGTTGGGGTA-TTTTGTCTGGCtatgggttagg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891386 188 - 9267652 TGAAAATAAAGGGACGAAAAAATAGATCTTTTTGAGGATGAAGTAACTAGAGTAACAAACAAAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGCTGTAAATATATAGATTTTCCAAAATGATATATTAAGCTATCAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCTGAgtatgggttaag i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12750815 178 + 14340318 TGAGAAGAAATAAAC-ATAAAACACCTATTTTCTAGGATCAAGTAAGTGGAG---AAAACAAAATCTAAGCTGACCAGAAATTATAACATGGAAACAAAGTCAAAAAGATATAA--TTTAAAAGGGA--ATCTTAAACTATAAAATATCAAGTAGA--TTTGGGGA-TTTTTTTTTCTTTTGGTTTGAA i otoGar3.GL873564 I 2362 I 954 a score=1411873.000000 s hg38.chrUn_KI270746v1 5923 152 + 66486 gaagaatatcccttttgccttctgaagtttccctgaaaatc-actaataggaggcagataaatagtagaaaaggca-----tacaggtttctgcaatgtgtgtacactggagcccttagaactaagacccaga-------cacacgatgcgtgcagaagcttatc s panTro5.chr2A 90266398 152 + 111504155 ggagaatgtcccttttgccttctgaagtttccctgaaaatc-actaataggaggcagatacatagtagaaaaggca-----tacaggtttctgcaatgtgtgtacactggagcccttagaacgaagacccaga-------cacacgatgcgtgcagaagcttatc i panTro5.chr2A C 0 C 0 s panPan2.chr7 108520027 152 - 162613886 ggagaatgtcccttttgccttctgaagtttccctgaaaatc-accaacaggaggcagataaatagtagaaaaggca-----tacaggtttctgcaatgtgtgtacactggagcccttagaatgaagaccgaga-------cacacgatgggtgcagaagcttatt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 129134 150 + 150013 ggagaatgtctcttttgccttctgaagtttccctgaaaatc-a-taataggaggcagataaatagtagaaaaggca-----tacaggtttctgcaatgtgtgtacactggag-ccttagaacgaagacccaga-------cacacgatgcgtgcagaagcttatc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 215321 152 + 1200634 ggagaatgtcccttttgccttctgaagtttccctgaaaatc-actaataggaggcagataaatagtagaaaaggca-----tacaggtttctgcaatgtgtgtacactggagcccttagaatgaagacccaga-------cacacgatgagtgcagaagcttatc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133471023 159 - 185818997 ggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300705 159 + 192294377 ggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782620 159 + 3123512 ggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaagcct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503266 159 + 10077455 ggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709270 159 + 127223203 ggagaatgtcccttttgccttctgaagattccctgaaaatc-aataacaggaggcagataaatagtagaaaaggca-----tacaggcttctgtaatgtgtgtaccctggagcccatagaatgaagacccaggacccagtcacacggtgggtacagaagcttatc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175876 159 - 1799296 ggagaatgtaccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753099 159 + 6934359 ggagaatgttcattttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggca-----tacagttttccgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacatggtgggtgcagaagcttatc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112559 153 - 128169293 ggagaatgttcattttgccttctgaagtttccctgaaaatcatctgaaaggaggcagatgaatagcagaaaaagca-----tacaggtttctgtaatgtgtgtatgtgggggccctcagaatgaagacccaac-------cacatgatggatacagaagctaatc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730202 152 - 18371965 ggagaatgtcccttttgccttctgaagtttccctgaaaatc-tttgacaggaggcagataaatagcagaaaaggct-----ttcaggtttctgtaatgtgtgtatgtgggggccctcagaatgaagacccagc-------cacgtgatgggtacagaagctaatc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389772 157 + 3566421 ggagaatgtcccttttgccttctgaagtttccctgaaaatc-actgacaggaggcagataaatagcagaaaaggcatacagtacaggtttctgtaatgtgtgtatgtaggggccctcagaatgaagactcagc-------cacatgatgggtacagaagctaatc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891574 150 - 9267652 ggagaatgtcccttttgccttctgaagattccctgaaaatc---agacaggaggcagataaatagcaggaaagtca-----tacaggtttctgtaacgtgtgtatgtgggggccctcagaatgaagacccagc-------cacatgatgggtacagaagctaatc i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12750993 954 + 14340318 I a score=2391847.000000 s hg38.chrUn_KI270746v1 6075 273 + 66486 taccacatgaagtttacagaaagaatggggtcttggatcacag----gg---------aaaaaaaaaaag---gttat------gtgggaaaacga-acctggctagcaacagtggacttattacataggtggaacctcactgggagcagtcctcagagagaatagac------agaaaatgtttctttcagacctttggagacctcagactctcagttaacctttcctagatccagacaagggggcagacctcagagaaagcctggctgcatcaaggctgattctctaaagatgcaaatct s panTro5.chr2A 90266550 275 + 111504155 taccacatgaagtttacagaaagaatggggtcttggatcacag----gg-------aaaaAAAAAAAAAG---GTTAT------CTgagaaaacga-ccctggctagcaacagtggacttattacataggtggaacctcactgggagcagtcctcagagagaatggac------agaaaatgtttctttcagatctttggagacctcagactctcagttaacctttcctagatccagacaagggggcagacctcagagaaagcctggctgcatcaaggcagattctctaccgatgcaaatct i panTro5.chr2A C 0 C 0 s panPan2.chr7 108520179 255 - 162613886 gaccacactgagtttacagaaaaaatgggggcttggatcatag----gg----------ggaaaaaaaag---gttat------gtgagaaaaaga-ccctggctagcaaca-----------------gtgaaacctcactgggagcagccctcagagagaacagac------agaaaatgtttctttcagacctttggagacctctgactctcagttaacctttcctacatccagacaagggggcagacctcagagaaagcctggctgcatcaaggcagattctctaccgatacaaatct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 129284 273 + 150013 taccacatgaagtttacagaaagaatggggtcttggatcacag----gg--------gaaaaaaaaaaag---gttat------gtgagaaaacga-cgctggctagcaacagtggacttattacataggtggaacctcactgggagcagtcctcagagagaatagac------agaaaatgtttctttcagacctttggagacctcagactctcagttaacctttcctagatccagacaa-ggggcagacctcagagaaagcctggctgcatcaaggcagattctctaaacatgcaaatct i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 215473 282 + 1200634 taccacatgaagtttacagaaagaatggagtcttggatcacag----ggggaaaaaaaaagaaagaaaac---gttat------gtgagaaaagga-ccctggctagcaacagtggacttattacgtaggtgaaacctcactgggaacagtcctcagagagaagagac------agaaaatgtttttttcagacctttggagacctcagactcttagttaacctttcctagatccagacaagcgggcagacctcagagaaagcctggctgcatcaaggcagattctctaccgatgcaaatct i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133471182 282 - 185818997 taccatactgagtttacagaaagaatggggacttggatcacag----aa------aaaaaaaaaaaaaag---attat------gagagaaaagga-ccttggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcggagagaacagatagaaaaagaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300864 282 + 192294377 taccatactgagtttacagaaagaatggggacttggatcacag----aa------aaaaaaaaaaaaaag---attat------gagagaaaagga-ccttggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcggagagaacagatagaaaaagaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i macFas5.chr3 C 0 I 328 s macNem1.NW_012011522v1 2782779 283 + 3123512 taccatactgagtttacagaaagaatggggacttggatcacaga---aa------aaaaaaaaaaaaaag---attat------gagagaaaagga-ccttggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcggagagaacagatagaaaaagaaaatgtttctttcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503425 280 + 10077455 taccatattgagtttacagaaagaatggggacttggatcacagaaagaa------aaaaaaaaaaaaaag---gttat------gagagaaaagga-ccctggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcagagagaacagac------agaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709429 270 + 127223203 taccacattgagtttatagaaagattggggacttggatcacag----------------aaaaaaaaaag---attat------gagacaaaagga-ccctggctagcaacagtggtcttgttacataggtgaaacttcactggaagtggccctcagagagaacagat------acaaaatgtttatctcagacctttggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctacagatggaaatct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1176035 276 - 1799296 taccacattgagtttacagaaagaatggggacttggatcacag----aa------aaaaaaaaaaaaaag---gttat------gagagaaaagga-ccctggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcagagagaacagac------agaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753258 279 + 6934359 taccacactgagtttacagaaagaatggggacttggatcacag----aa------aaaaaaaaaaaacggggagttat------gagagaaaagga-ctctggctagcaacagtggttttggtacacagctgaaacttcactggaagtggccctcagacagaacagac------agaaaatgtttctctcagacctatggaagtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcctcaaggcagattctctacaggtgcaaatct i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112712 247 - 128169293 taccacgctgaagttacagaaagaatggggacttagatcaccg----gg--------aaaaaaaaggtag-------------------aaaagga-ccctgactagcaacagtggtcttgttacgtagatgaaatctcactgggagaa-----------------ac------agaaactgtttctttcagacctttagaggcttcagactctcagtttacctttcctagatccagacaaggggacagacctcagagaaagcctgggtgcatcaaaccagattctctacaggtacaaatct i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730354 270 - 18371965 cactccgctgaagttacagaaagaatgggggcttagatcaccg----ga--------aaaaaaaaaaaag---at----------agaaaaaagga-ccctaactagcaacagtggtcttgttacgtagatgaaatctcactgggagaagccctcagaggggatagac------agaaactgtttctttcagacctttagaggcttcagactctccatttacctttcctagaaccagacaaggggacagaccttggagaaagcctgggtgcatcaagtcagattctctacagctacaaatct i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389929 255 + 3566421 tacaacgctgaagtgacagaa-------------agatcaccg----ga--------aaaaaaaagagag---------------agggaaaagga-ccctgactagcaacagtggtcttgttgtgtagatgaaatctcactgggagaagccctcagaaaggatagac------agaaactgtttctttcagacctttagaggcttcagactctcattttacaattcctagatcctgaccaggggacagacctcagagaaagcctgggtgcatcaagccagattctctacaggtacaaatct i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891724 270 - 9267652 taccacactgaagttacagaaagaatgggggcttagatcacca----ga--------aaaaaaaaaagat---ag----------agagaaaagga-ccctgactagcaacagtggtcttgttacgtagattaaatctcactgggagaagccctcagagaggatagac------agaaactgtttctttcagacctctagagacttcagactctcagtttacctttcctagatccagacaagaggacagacctcagagaaagcctgggtgcatcaagccagattctctacaggtacaaatct i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12751947 268 + 14340318 taccatcttgaggatgcagaaagaacaaaggcttggatcctgg----ca---------------aaacag---gttataggacagagaaaagaggaggcctggctagcaaaggtggtctttttata-aaatgaaagatcacaggtagcagccctcagaagg--tagat------gatatatgtttccttcagacctttaaaaatgtcagctcctcagctaaacttctccaggtct-gccaagggag--ggcctcagagaaaaccaggctacggcagagcaacctctctctggaggcaaatct i otoGar3.GL873564 I 954 C 0 a score=46952.000000 s hg38.chrUn_KI270746v1 6348 5 + 66486 cccca s panTro5.chr2A 90266825 5 + 111504155 cccca i panTro5.chr2A C 0 C 0 s panPan2.chr7 108520434 5 - 162613886 cccaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 129557 5 + 150013 cccca i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 215755 5 + 1200634 cccca i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133471464 5 - 185818997 ccctg i rheMac8.chr3 C 0 I 328 s macFas5.chr3 67301474 5 + 192294377 ccctg i macFas5.chr3 I 328 C 0 s macNem1.NW_012011522v1 2783062 5 + 3123512 ccctg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503705 5 + 10077455 ccctg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709699 5 + 127223203 ccctg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1176311 5 - 1799296 ccctg i manLeu1.NW_012105809v1 C 0 T 6035 s colAng1.NW_012115910v1 1753537 5 + 6934359 ccccg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112959 5 - 128169293 cccca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730624 5 - 18371965 cccca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390184 5 + 3566421 cccca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891994 5 - 9267652 cccca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752215 5 + 14340318 cccca i otoGar3.GL873564 C 0 I 4 a score=81361.000000 s hg38.chrUn_KI270746v1 6353 8 + 66486 agacagct s panTro5.chr2A 90266830 8 + 111504155 agacagct i panTro5.chr2A C 0 C 0 s panPan2.chr7 108520439 8 - 162613886 agacagct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 129562 8 + 150013 agacagct i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 215760 8 + 1200634 agacagct i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133471797 8 - 185818997 agacagct i rheMac8.chr3 I 328 C 0 s macFas5.chr3 67301479 8 + 192294377 agacagct i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783067 8 + 3123512 agatagct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503710 8 + 10077455 agacagct i cerAty1.NW_012000909v1 C 0 I 316 s chlSab2.chr21 5709704 8 + 127223203 agacagct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170281 8 - 1799296 agacagcg i manLeu1.NW_012105809v1 T 6035 C 0 s colAng1.NW_012115910v1 1753542 8 + 6934359 agacagct i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112964 8 - 128169293 agagagtt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730629 8 - 18371965 agagagct i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390189 8 + 3566421 agagagct i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891999 8 - 9267652 agagagtt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752224 8 + 14340318 agacaact i otoGar3.GL873564 I 4 C 0 a score=24752.000000 s hg38.chrUn_KI270746v1 6361 2 + 66486 tt s panTro5.chr2A 90266838 2 + 111504155 tt i panTro5.chr2A C 0 C 0 s panPan2.chr7 108520447 2 - 162613886 tt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 129570 2 + 150013 tt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 215768 2 + 1200634 tt i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133471805 2 - 185818997 tt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301487 2 + 192294377 tt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783075 2 + 3123512 tt i macNem1.NW_012011522v1 C 0 I 1003 s cerAty1.NW_012000909v1 2504034 2 + 10077455 tt i cerAty1.NW_012000909v1 I 316 C 0 s chlSab2.chr21 5709712 2 + 127223203 tt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170289 2 - 1799296 tt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753550 2 + 6934359 tt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112972 2 - 128169293 tt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730637 2 - 18371965 tt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390197 2 + 3566421 tt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892007 2 - 9267652 tt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752232 2 + 14340318 tt i otoGar3.GL873564 C 0 C 0 a score=49290.000000 s hg38.chrUn_KI270746v1 6363 5 + 66486 gcagc s panTro5.chr2A 90266840 5 + 111504155 gcagc i panTro5.chr2A C 0 C 0 s panPan2.chr7 108520449 5 - 162613886 gcagc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 129572 5 + 150013 gcaga i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 215770 5 + 1200634 gcagc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133471807 5 - 185818997 gcagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301489 5 + 192294377 gcagc i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504036 5 + 10077455 gcagc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709714 5 + 127223203 gcagc i chlSab2.chr21 C 0 I 18 s manLeu1.NW_012105809v1 1170291 5 - 1799296 gcagc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753552 5 + 6934359 gcagc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112974 5 - 128169293 gcagc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730639 5 - 18371965 gcagc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390199 5 + 3566421 gcagc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892009 5 - 9267652 gcagc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752234 5 + 14340318 taagc i otoGar3.GL873564 C 0 C 0 e macNem1.NW_012011522v1 2783077 1003 + 3123512 I a score=147431.000000 s hg38.chrUn_KI270746v1 6368 18 + 66486 taagtttgcatttccagc s panTro5.chr2A 90266845 18 + 111504155 taactttgcatttccagc i panTro5.chr2A C 0 C 0 s panPan2.chr7 108520454 18 - 162613886 tatttttgcatttccagc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 129577 18 + 150013 taagtttgcatttccagc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 215775 18 + 1200634 tatgtttgcatttccagc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133471812 18 - 185818997 tttttttgcatttccagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301494 18 + 192294377 tttttttgcatttccagc i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504041 18 + 10077455 tttttttgcatttccagc i cerAty1.NW_012000909v1 C 0 C 0 s manLeu1.NW_012105809v1 1170296 18 - 1799296 tttttttgcatttccagc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753557 18 + 6934359 tttttttgcatttccagc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112979 18 - 128169293 tatttttgcatttccagc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730644 18 - 18371965 tctttttgcatttccagc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390204 18 + 3566421 tatttttgcatttccagc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892014 18 - 9267652 taattttgcatttccagc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752239 18 + 14340318 tatttttgcatttccagc i otoGar3.GL873564 C 0 C 0 e chlSab2.chr21 5709719 18 + 127223203 I e macNem1.NW_012011522v1 2783077 1003 + 3123512 I a score=2951171.000000 s hg38.chrUn_KI270746v1 6386 355 + 66486 ccttctcaatagccattttgaaatatatcaaggaaatatatttagggg--------------------------------------------------------------------------taaaatatattagtttccttcaTATAGCTATAAAACATACAGGAATAATTTTTGTCAATGTCTActacaaatccaatatagctgtaattataaaacccaccagatattgaagaaaaaatatgtagagt---acatc-act--tacaaatgttgat-----actaaaatgccaaataaaataaaaataatatccaacaatatttgaaacagtaagacaagaaattggcaa-a---------aaaaatccacctcggggatgaaagtgcgtt--------------------tccaaatttggtaatccaataatattaataatc--atattgattagcccaaattaaaaat s panTro5.chr2A 90266863 364 + 111504155 ccttctcaatagccattttgaaatatatcaaggaaatatatttagggg--------------------------------------------------------------------------taaaatatattagtttccttcaTACAGCTATAAAACATACAGGAATAATTTTTGTCAATGTCTACTACAAATCCAATATAGCAGTAATTATAAAACCCACCAGATATCGAAGAAAAAATATGTAGAGT---ACATC-AAT--TACAAATGTTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATATCCAACAATATTTGAAACAGTAAGACAAGAAATTGGCAA-AAAATAAAACAAATATCCACCTTGGAGATGAAAGTGTGTT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGCACAAATTAAAAAT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108520472 361 - 162613886 ccttctgaatagccgttttgaaatatatcaaggaaatatattttgggg--------------------------------------------------------------------------taaaatatattggtttcattcaTACAGCTATAAAACATAGAGAAATAATTTTTGTCAGTGTCTACTACAAATCCAATATAGCAGTAATTATAAAACCCACCAGATATTGAAGAAAAAATATGTAGAGT---ACATC-ACT--TACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATCTCCAACAGTTTTTGAAACAGTAAGACAAGAAATTAGCAATAAAATAAAACAAATATCCACCTTGGGGATGAAAGTATCAT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGCCCAAAT----AAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 129595 364 + 150013 ccttctcaatacccattttgaaatatatcaaggaaatatatttagggg--------------------------------------------------------------------------taaaatatattagtttccttcaTACAGCTATAAAACATACAGGAATAATTTTTGTCAATGTCTACTACAAATCCAATATAGCTGTAATTATAAAACCCACCAGATATTGAAGAAAAAATATGTAGAGT---ACATC-ACT--TACAAATGTTGAT-----ACTAAAATG-CAAATAAAATAAAAATAATATCCAACAATATTTGAAACAGTAAGACAAGAAATTGGCAAAAAAAAAAAACAAATATCCACCTTGGGGATGAAAGTGTGTT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGCCCAAATTAAAAAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 215793 365 + 1200634 ccttctgaatagccattttgaaatatatcaaggaaatatattttgggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCTATAAAACATACAggaataatttttgtcaacgtctactacaaatccaatatagcagtaattataaaacccaccagatattgaagaaaaaatatctagagt---acatt-gct--tacaaatattgat-----actaaaatgccaaataaaataaaaataatatccaacaatatttgaaacagtaagacaagaaattagcaaaaaaataaaacaaatatccaccttggggatgaaagtgtgat--------------------tccaaatttggtaatccaataatattaataatc--atattgattagcccaaataaaaaat i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133471830 362 - 185818997 -cctctgaatagcca-tttgaaatatatcaaggaaacatattttgggg--------------------------------------------------------------------------taaaatatgttgatttccttcaTACAGCTATAAAACATAAAGAAATAATTTTTGTCAATATCTACTACAGATCCAATATAGCAGTAATTATAAAATCCACCAGATATTGAAGAAAAAATATGTAGAGT---ATCTC-ACT--TACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATCTCCGACAATATTTGAAACAGTAAGACAAGAAACT-GCAAAACAATAAAGCAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGACCAAATAAAAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301512 362 + 192294377 -cctctgaatagcca-tttgaaatatatcaaggaaacatattttgggg--------------------------------------------------------------------------taaaatatgttgatttccttcaTACAGCTATAAAACATAAAGAAATAATTTTTGTCAATATCTACTACAGATCCAATATAGCAGTAATTATAAAATCCACCAGATATTGAAGAAAAAATATGTAGAGT---ATCTC-ACT--TACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATCTCCGACAATATTTGAAACAGTAAGACAAGAAACT-GCAAAACAATAAAGCAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGACCAAATAAAAAAT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504059 358 + 10077455 -cctctgaatagcca-tttgaaatatatcaaggaaatatattttgggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCCATAAAACATAAAGAAATAATTTTTGTCAATATCTATTACAGATCCAATATAGCAGTAATTATAAAACCCACCAGATACTGAAGAAAAAATATGTAGAGT---GTCTC-------ACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATCTCCAACAATATTTGAAACAGTAAGACAAGAAACT-GCAAAACAATAAAACAAATATCTACCTTGGGGATGAAAGTGTGAT--------------------TACAAATTTGGTAATCCAATAATATTAATAATC--ATATTCATTAGACCAAATAAAAAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709737 359 + 127223203 ccttctgaatagcca-tttgaaatatatcaaggaaatatattttgggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCTATAAAACATAGAGAAATAATTTTTGTCAATATCTACTACAGATCCAATACAGCAGTAATTACAAAACCCACCAGATATTGAAGAAAAAATATGTAGAGT---ATCTC-------ACAAATATTGAT-----ATTAAAATGCCAAATAAAATAAAAATAATCTCCAACAGTATTTGAAACAGTAAGACAAGAAACT-GCAAAACAATAAAACAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------TCCAAATTTGGtaatccaatcatattaataatc--atattcatTAGACCAAATAAAAAAT i chlSab2.chr21 I 18 C 0 s manLeu1.NW_012105809v1 1170314 362 - 1799296 -cctctgaatagcca-tttgaaatatatcaaggaaatatattttgggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCCATAAAACATAAAGAAATAATTTTTGTCAATATCTACTACGGATCCAATATAGCAGTAATTATAAAACCCACCAGATACTGAAGAAAAAATATGTAGAGT---ATCTC-ACT--TACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATCTCCAACAATATTTGAAACAGTAAGACAAGAAACT-GCAAAACAATAAAACAAATATCTACCTTGGGGATGAAAGTGTGAT--------------------TACAAATTTGGTAATCCAATAATATTAATAATC--ATATTCATTAGACCAAATAAAAAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753575 353 + 6934359 -cctctgaagagcca-tttgaaatatatcaaggaaatatattttgggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCTATAAAACATAGAGAAATAATTTTTGCCAATATCTACTACAGATCCAATATAGCAGTAATTATAAAACCCACCAGATACTGAAGAAAAAATA-------------CTCTACA--TACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATCTCCAACAACATCTGAAACAGTAAGACAAGAAACT-GCAAAACAATAAAACAAATATCTACCTTGGGGATGAAAGTATGAT--------------------TCCAAATTTGGtaatctaataatagtaataatc--atattcatTAGACCAAATAAAAAAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112997 383 - 128169293 ccttctgaatagccattttgaaatatgtcaaggaaatattttttgggg--------------------------------------------------------------------------tgaaatatattggttttcttcaTACAGCTATAAAACATAGACATATAATTTTTGTTAATATCTTCTACAAATCCAGTATAGCAGTA---ATAAAACCCAGCAGATATTGAAGAAAAAATATGTAGAGT---ACATC-ACT--TACAAATATTGATACTAAACTAAAATGCCAAATAAAATAAAAATAATTTCCAACAATATTTGAAGCAGTAATACAAGAAATTAGCAAAAAA---AATTAAATATCCACCTTGGGGATGAAAGTG-GATAAAAATTTCCAAATTTTTCATCCAAATTTTGAAATCCAATAAAATTAACAATC--GTATTGATTATACAAAATAAAAAAT i calJac3.chr8 C 0 I 306 s saiBol1.JH378145 730662 368 - 18371965 ccttctgaatagccattttgaaatatgccaaggaaatatattttaggg--------------------------------------------------------------------------tgaaatatattggtcttcttcaTACAGCTATAAAACATAA----ATAATTTTTGTTAATATCTTCTACAAATCCAATATAGCAGTAAATATAAAACCCAGCAGATACTGAAGAAAAAATATGTAGAGT---ACATC-ACTTATACAAATATTGATACTAAACTAAAATGCCAAATAAAATAAAAATAATTTCCAACAATATTTGAAATGGTAATACAAGAAATTAGCAAAAAAATTAAACAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------CCCAAATTTGGAAATCCAATAATATTCACAATC--ATATTCATTAGACAAATTAAAAAAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390222 363 + 3566421 cccc----atagtcattttgaaatatgtcaaggaaatatattttaggg--------------------------------------------------------------------------tgaaatatattggttttcttcaTACAGCTATAAAACATAGATAAATAATTTTTGTTAATATCTTCTACAAATCCAATATAGCAGTAAATATAAAACCTAGAAGATACTGAAGAAAAAATATGTAGAGT---ACATC-ACT--TACAAATATTGATACTAAACTAAAATGCC-AATGCAATAGAAATAATTTCTAATAATATTTGAAAC--TAATACAAGCAATTAGCAAAAAAATTAAACAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------CCCAAATTTGGAAATCCAATAAAATTAACAATC--ATATTGATTAGACAAAATAAAAAAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892032 358 - 9267652 ccttctgaatagccactttgaaataggtcaaggaaatatattttaggg--------------------------------------------------------------------------tgaaatatattggttttcttGATACAGCTATAAAACATAGATAAATAATTTTTGTTAATATCTTCTACAAATCCAATATAGCAGTAAATATAAAACTCAGC------------AAAAATATGTAGAGT---ACATC-ACT--TACAAATATTGATACTAAACTAAAATGCCAAATAAAATAAAAATAATTTCCAACAATACCTGAAACAGTAATACAAGAAATTCACAAAAAAATTAAACAAATATCTACCTTTGGGATGAAAGTGTGAT--------------------CCCAAATTTGGTAATCCAATAAAATTAACAATC--ATATTGATTAGACAGAATAAAAAAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752257 412 + 14340318 ccttctgaatagctgacttgaaatatgtcaaggaaatacattttggggtgaaatattttTTTTTATTGAATGGTAACTATGTACATTAATGCACTTCTGGGGTACAGTGTGGGGTTTTCACATGAAATATTTTGGTTTGCTTCATATGGCTATTGAATATACAGAATT--TTCTCGCCAATT-----------TTCAATACAGTTAtaacattaaaacccaacaggtactgtaaaaaa---atgcagagtaaaatatc-act--tacaaatattgat-----acaaaaaggcctgataaaataaaaata-------------tgtgaaatattagaatgagaaatt---aataagatttaatagattttcaccttacaaatgaaagtgtgat--------------------ttcacattagataattccataacaaaaataatcatatattaatcagatcaaataaaaaat i otoGar3.GL873564 C 0 C 0 e macNem1.NW_012011522v1 2783077 1003 + 3123512 I a score=2404880.000000 s hg38.chrUn_KI270746v1 6741 296 + 66486 aaataggggattctcattacattctaaa-atatatttgttaaaaggcaatattcatGTCTTTAAAGATTTTAAATGCTATAAAGAGTCTGATATTCTATATGCAAAC--GTGTATGTCCATTAGAAGAAGAAAG--GCCTGATTTTCATGTGTTACTACATAGAGA----TAGA-----GAAGTGGATAGATTAACTTGCATATGCATAGAGAAAGCATAAAATAGAAATTTACTATCATA-TTAAAGGAATTTAAATTCAACAATAAAATAATTC------------AAAGGTAAGATTTTAAATATTTTTAACAGGTACAT s panTro5.chr2A 90267227 296 + 111504155 AAATAGGGGATTCTCAGTACATGCTAAA-ATATATTTTTTAAAAGGCAATATTCATGTCTTTAAAGATTTTAAATGCTCTAAAGAGTCTGATATTCTATATGCAAAC--GTGTATGTCCATTACAAGAAGAGAG--GCCTGATTTTCATGTGTTACTACATAGAGA----TAGA-----GAAGTGGATAGGTTAATTTGCATATGAATAGAGAAAGCATAAAATAGAAATTTACTATCATA-TTAAAGGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTTTAACAGGTACAT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108520833 299 - 162613886 AAATAGAGGATTTTCAGTAAATGCAAAA-ATATATTTGTTAAAAGGTAATATTCATGTATTTAAAGATTTTAAATGCTATAAAGAGTCTGATATTCTATATGCAAACATGTGTATGTCTATTAGAAGAAGAGAG--GCTTGATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGGATAGATTAATTTGCATATGTATAGAGAAACTATAAAATACAAATTTACTATCATACTTAAAGGAATTTAAATTCAACAATAAAATAATTC------------AACGGTAAAATTTTAAATATTTTTAACAGTTACAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 129959 297 + 150013 AAATAGGGGATTCTCAGTACATGCTAAA-ATATATTTGTT-AAAGGCAATATTCATGTCTTTAAAGATTTTAAATGCTATAAAGAGTCTGATATTCTATATGCAAACATGTGTATGTCCATTAGAAGAAGAGAG--GCCTGATTTTCATGTGTTACTACATAGAGA----TAGA-----GAAGCGGATAGATTAATTTGCATATGCATAGAGAAAGCATAAAATAGAAATTTACTATCATA-TTAAAGGAATTTAAATTCAACAATAAAATAATTC------------AAAGGTAAGATTTTAAATATTTTTAACAGGTACAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 216158 297 + 1200634 aaataggggattctcagtacatgctaaa-atatctttgttaaaaggtaatattcatGTCTTTAAAGATTTTAAATGCTATAAAGAGTCTGATATTCTATATGCAAACATGTGTATGTCTATTAGAAGAAGAGAG--GCCTGATTTTCA--TGTTACTACGTAGAGA----TAGA-----GAAATGGATAGATTAATTTGCATATGCATAGAGAAAGCATAAAATAGAAATTTACTATCATACTTAAAGGAATTTAAATTCAACAATAAAATAATTC------------AAACGTAAAATTTTAAATATTTTTAACAATTACAT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133472192 296 - 185818997 AAATAGGAGATTCTCAGTACATGCTAAA-ATATATTTGTTAAAAGGTAATATTCATGTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAACAAAC--GTGTATGTCTATTAGAAGAAAAGAG--GTCTCATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGGATAGATTAATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTTT-ACAGTTACAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301874 296 + 192294377 AAATAGGAGATTCTCAGTACATGCTAAA-ATATATTTGTTAAAAGGTAATATTCATGTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAACAAAC--GTGTATGTCTATTAGAAGAAAAGAG--GTCTCATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGGATAGATTAATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTTT-ACAGTTACAT i macFas5.chr3 C 0 I 50 s cerAty1.NW_012000909v1 2504417 296 + 10077455 AAATAGGAGATTCTCAGTACATGCTAAA-ATATATTTGTTAAAAGGTAATATTCGTGTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAGCAAAC--GTGTATGTCTATTAGAAGAAAAGAG--GTCTCATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGGATAGATTAATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTTT-ACAGTTACAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710096 296 + 127223203 AAATAGGAGATTCTCAGTACATGCTAAA-ATATATTTGTTAAAAGGTAATATTCGTGTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATGTTCTATAAGCAAAT--GTGTATGTCTATTAGAAGAAAAGAG--GTCTCATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGGATAGATTAATTTGCATATGCATAGATAAAGCATAAAATATAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTTT-ACAGTTATAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170676 296 - 1799296 AAATAGGAGATTCTCAGTACATGCTAAA-ATATATTTGTTAAAAGGTAATATTCGTGTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAGCAAAC--GTGTATGTCTATTAGAAGAAAAGAG--GTCTCATTTTCGTATGTTACTACATAGAGA----TAGA-----GAAGTGGATAGATTAATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTTT-ACAGTTACAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753928 294 + 6934359 AAATAGAAGATTCTCAGTACATGCTAAA-ATATAGTTGTTAAAAGGTAATATTCATGTATTTAAATATTTTAAATGCTATGAAGAGTCAAATATTCTATAAGTAAAC--GTGTATGTCTATTAGAAGAAAAGAG--GTCTCATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGGATAGATTAATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATACTTAAAAGAATTTAAATTCAACA--AAAAAAATTC------------AATGGTAAAATTTTTAATATTTTT-ACAGTTACAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113686 310 - 128169293 aaaTAGAGGATTCTAAGTACATGCTAAA-GCATTTTTGTTAAAGGGTTATATTCATGTCTTTAATGATTTTAAATGCCATAACGAGTTTGATATTCCATATGCAAACATATATATGCCTATTAGAAGAAGAGAG--CTCTCATATTCATATGTTACTACATAGAGATTGTTCAA-----GAAGTGAATAGATTAATTTTCATATGCACAGAGTCAGTATAAAATTCAAATTTATTATA---CTTAAAGGAATTTAAATTCAAGAATTAAATAATTCAACGAT-TAAATAATGGtaaaattttaaatatttta-ataGTTGCAT i calJac3.chr8 I 306 C 0 s saiBol1.JH378145 731030 310 - 18371965 GAAGAGAGGATTCTCAGTACATGCAAAA-ACATTTTTGTTAAAGTGTTATATTCATGTCTTTAATGATTTTAAATGCTATAATGAGTCTGATATTCCATATGCAAACATATGTATGCCTATTAAAAGAAGAGAG--GCCTCATTTTCATATGTTACTACATACAGATTGTTAGA-----GAAGTGACTAGATTAATTTGCATATGCATAGAGAAAGtataaaatacaaatttattata---cttaaaggaatttaaattcaagaataaaataattcaacaat-taaataatggtaaaattttaaatatttta-ataGTTGCAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390585 309 + 3566421 AAAGAGAGGATTCTCAGTACATGCTAAA-ACATTTTTGTTAAAGGGTTATATTAACGTCTTTAATGATTTTAAATGCTACAACGAGGCTGATACTCCATATGCAAACATGTGTAAGCCTATTAGAAGAAGAGAG--GTCTCATTTTCATATGTTACTACATAGAGATTATTAGA-----GAATTGAATAGATTAATTTGTATATGCATAGAGAAAGTATAAAATACAAATTTATTATA---CTTAAAGGAATTTAAATTCAAGAA-AAAATAACTCAATGAT-TAAATAATGGTAAAATTTTAACTATTTTA-ATAGTTGCAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892390 308 - 9267652 ----AGAGGATTCTCAGTACATGCTAAA-ACGTATTTGTTAAAGGTTTATATTCATGTCTTTAATGACTTTAAATGCTATAACGAGTCTGATATTCCATATGCAAATATCTGTATGCCTATTAGAAGAAGAGAG--GTCTCATTTTCATATGTTACTACATAGAGATTGTTAGA-----GAAGTGAATAGATTAATTTGTATATGCATAGAGAAAGTGTAAGATACAAATTTATTATCAT-ATTAAAGGAATTTAAATTCAAGAATAAAATAATTCAATGAT-TAAATAATAGTAAAATTTTAAATATTTTA-ATAGTTGCAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752669 314 + 14340318 atgtatgggcttcttaatatatgccaaatatgtatttgttaaaaGGTTATATTCATGTATTCAAAGGCTCAAAAGGCCACAGAGAGTCTGATATTCCCCATACACAT--TCGTATGTCTAGGAGAGGAAAAGAGAAGTCTTAGTCTTACTTTCTACTACGTAAATC----TAGACAGAGGAAACAGAAGGATTAATTTTTACATGCATAAA-AAAACATCAACTG-AAACTTTTTACCAC-CTTAAAGAAAGTTAAATTCAGGAATAAAAAGTTTCAATGGCAAAAATAATGGTAAAATTGTACATATTTTGTATAGTTACAC i otoGar3.GL873564 C 0 C 0 e macNem1.NW_012011522v1 2783077 1003 + 3123512 I a score=126202.000000 s hg38.chrUn_KI270746v1 7037 15 + 66486 TATTAATATTAGATA--- s panTro5.chr2A 90267523 15 + 111504155 TATTAATATTAGATA--- i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521132 15 - 162613886 TATTAATATTAGATA--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 130256 15 + 150013 TATTAATATTAGATA--- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 216455 15 + 1200634 TATTAATATTAGATA--- i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133472488 15 - 185818997 TATTAATATTAGATA--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302220 15 + 192294377 TATTAATATTAGATA--- i macFas5.chr3 I 50 C 0 s macNem1.NW_012011522v1 2784080 15 + 3123512 TATTAATATTAGATA--- i macNem1.NW_012011522v1 I 1003 C 0 s cerAty1.NW_012000909v1 2504713 15 + 10077455 TATTAATATTAGATA--- i cerAty1.NW_012000909v1 C 0 I 65 s chlSab2.chr21 5710392 12 + 127223203 TATTAATATTA---A--- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170972 15 - 1799296 TATTAATATTAGATA--- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754222 12 + 6934359 TATTAATGTTAG------ i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113996 15 - 128169293 CATTAATATTAGATC--- i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 731340 15 - 18371965 TATTAATATTAGATT--- i saiBol1.JH378145 C 0 I 3 s cebCap1.NW_016107540v1 1390894 15 + 3566421 TATTAATATTGGATC--- i cebCap1.NW_016107540v1 C 0 I 3 s aotNan1.NW_018514471v1 1892698 15 - 9267652 TATTAATATTAGATC--- i aotNan1.NW_018514471v1 C 0 I 3 s otoGar3.GL873564 12752983 18 + 14340318 TGTCGATATTGCATTATG i otoGar3.GL873564 C 0 C 0 a score=148940.000000 s hg38.chrUn_KI270746v1 7052 24 + 66486 ATATTTATAATAATTGTGAAAATA s panTro5.chr2A 90267538 24 + 111504155 ATATTTATAATAATTGTGAAAATA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521147 24 - 162613886 ATATTTATAATAATTGTGAAAATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 130271 24 + 150013 GTATTTATAATAATTGTGAAAATA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 216470 21 + 1200634 ATACTT---ATAATTGTGAAAATA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133472503 21 - 185818997 A---TTATAATAATTGTGAAAATA i rheMac8.chr3 C 0 I 47 s macFas5.chr3 67302235 18 + 192294377 ATATTTATAATAATTGTG------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784095 18 + 3123512 ATATTTATAATAATTGTG------ i macNem1.NW_012011522v1 C 0 C 0 s chlSab2.chr21 5710404 24 + 127223203 ATATTTATAATAATTGTGAAAATA i chlSab2.chr21 C 0 I 47 s manLeu1.NW_012105809v1 1170987 24 - 1799296 ATATTTATAATAATTGTGAAAATA i manLeu1.NW_012105809v1 C 0 I 47 s colAng1.NW_012115910v1 1754234 24 + 6934359 ATATTTATAATAATTGTGAAAATA i colAng1.NW_012115910v1 C 0 I 47 s calJac3.chr8 108114014 24 - 128169293 ACATTTATAATAATTATGAAAAAG i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 731358 23 - 18371965 ACATTTATAATAATTATGAAAAC- i saiBol1.JH378145 I 3 C 0 s cebCap1.NW_016107540v1 1390912 22 + 3566421 ACA--CATAATAATTATGAAAAAG i cebCap1.NW_016107540v1 I 3 C 0 s aotNan1.NW_018514471v1 1892716 24 - 9267652 ACTTTTATAATAACTATGAAAAAG i aotNan1.NW_018514471v1 I 3 C 0 s otoGar3.GL873564 12753001 24 + 14340318 ATATGTGTGATAACTGTGACAATA i otoGar3.GL873564 C 0 C 0 e cerAty1.NW_012000909v1 2504728 65 + 10077455 I a score=33522.000000 s hg38.chrUn_KI270746v1 7076 9 + 66486 TTCAATGCT s panTro5.chr2A 90267562 9 + 111504155 TTCAATGCT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521171 9 - 162613886 TTCAATGCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 130295 9 + 150013 TTCAATGCT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 216491 9 + 1200634 TTCAGTGCT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108114038 8 - 128169293 -TCAATGCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731381 8 - 18371965 -TCAATGCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390934 8 + 3566421 -TCAATGCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892740 8 - 9267652 -TCAATGCT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753025 9 + 14340318 TTCAATGCT i otoGar3.GL873564 C 0 C 0 e colAng1.NW_012115910v1 1754258 47 + 6934359 I e manLeu1.NW_012105809v1 1171011 47 - 1799296 I e chlSab2.chr21 5710428 47 + 127223203 I e cerAty1.NW_012000909v1 2504728 65 + 10077455 I e macNem1.NW_012011522v1 2784113 0 + 3123512 C e rheMac8.chr3 133472524 47 - 185818997 I e macFas5.chr3 67302253 0 + 192294377 C a score=225788.000000 s hg38.chrUn_KI270746v1 7085 24 + 66486 AAAAT-AAGATAGAATGTCTAAACA s panTro5.chr2A 90267571 24 + 111504155 AAAAT-AAGATAGTATGTCTAAACA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521180 24 - 162613886 AAAAT-AAGATAGAATGTCTAGACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 130304 24 + 150013 AAAAT-AAGATAGAATGTCTAAACA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 216500 24 + 1200634 AAAAT-AAGATAGAATGTCTAAACA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133472571 24 - 185818997 AAAAT-AAAATAGAACATCTAAACA i rheMac8.chr3 I 47 C 0 s macFas5.chr3 67302253 24 + 192294377 AAAAT-AAAATAGAACATCTAAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784113 24 + 3123512 AAAAT-AAAATAGAACATCTAAACA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504793 24 + 10077455 AAAAT-AAAATAGAACATCTAAACA i cerAty1.NW_012000909v1 I 65 C 0 s chlSab2.chr21 5710475 24 + 127223203 AAAAT-AAAATAGAACATCTAAACA i chlSab2.chr21 I 47 C 0 s manLeu1.NW_012105809v1 1171058 24 - 1799296 AAAAT-AAAATAGAACATCTAAACA i manLeu1.NW_012105809v1 I 47 C 0 s colAng1.NW_012115910v1 1754305 24 + 6934359 AAAAT-AAAAAAGAACATCTAAACA i colAng1.NW_012115910v1 I 47 C 0 s calJac3.chr8 108114046 24 - 128169293 AAAAT-AAAATAGAAGGTCTAAACA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731389 24 - 18371965 AAGATAAAAATAGAAGGTCTAAA-A i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390942 24 + 3566421 AAAAT-AAAATAGAAGGCCTAAACA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892748 24 - 9267652 AAAAT-AAAACAGAAGGTCTAAACA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753034 24 + 14340318 AAAAT-AAAGTAGAAAGTACAAGAA i otoGar3.GL873564 C 0 I 622 a score=2547710.000000 s hg38.chrUn_KI270746v1 7109 288 + 66486 TCAGTATTAAAACTAGTATAAATATTTGCTTGTTTATACAAGGAAAATTCAAGCTCGACCTAAAATTATATAGGAAATAAAAGAAAAATTTTAAGGGAGCTCTTTAATA-ACataaac----atatatat--at----------acacacccacatataacatgt-------atatatgttatatgggatagatataga----tttaacatg-ttatatctatatttg----------tatctat----aactacagctgtatgtatctacatttctatatatttactcagtgatataaatataGACTGGAATAAATATAAAGGCACATAT s panTro5.chr2A 90267595 286 + 111504155 CCAGTATTAAAACTAGTATAAATATTTGCTTGTTTATACAAGGAAAATTCAAGCTTGACCTAAAATTATATAGGAAAGAAAAGAAAAATTTTAAGGGAGCTCTTTAATA-ACataaac----atatatat--at----------acacacacacatataacatgt-------atatatgttatatgggatagatataga----tttaacatg-ttatatctatatttg----------tatctgt----aactacagctgtatgtatctacatttctatatatttactc--tgatataaatataGACTGGAATAAATATAAAGGCACATAT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521204 298 - 162613886 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTATACAAGGAAAATTCAAGCTCAACCAAAAATTATATAGGAAATAAAAGAAAAATTTTAAGAGAGCTCTTTAATA-acacaaac----atatatat--atatacacacacacacacgcacatataacatgt-------atatatgttatatgggatagatataga----tttaacatg-ttatatctatatttgt------atctatctat----aactatagctatatgtatctacattcctatatatttacttagtgat----atatagactagaataaatataaaggcacataa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 130328 287 + 150013 TCAGTATTAAAACTAGTATAAATATTTGCTTGTTTATACAAGGAAAATTCAAGCTCGACCTAAAATTATATAGGAAATAAAA-AAAAATTTTAAGGGAGCTCTTTAATA-ACataaac----atatatat--at----------acacacccacatataacatgt-------atatatgttatatgggatagatataga----tttaacatg-ttatatctatatttg----------tatctat----aactacagctgtatgtatctacatttctatatatttactcagtgatataaatataGACTGGAATAAATATAAAGGCACATAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 216524 288 + 1200634 TCAGTATTAAAACTAGTATAAATATTTGCTTGTTTATACAAGGAAAATTCAAGCTCAACCTAAAATTATATAGGAAATAAAAGAAAAATTTTAAGGGAGCTCTTTAATA-ACACAAAC----atatatat--at----------aca----cacatataacatgt-------atatatgttatatgggatagatataga----tttaacatg-ttatatctatatttga------atctatctat----aactacagctgtatgtgtctacatttctgtatatttaCTCAGTGATATAAATGTAGACTGGAATAAATATAAAGGCACATAT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133472595 290 - 185818997 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTATACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACAAAAGAAAAATTTTAAGGGAGCTCTTTAata-atacaaac----atatatat------acacacacatacacacatatataac--gt-------atatatgttacatgggatagacacaga----tttaacatg-ttatatctatatttg----------tatctat------ctatatctatatgtatctacatttctatatgtttactcagttatgtaaatatagactggaataaatataaagacacatat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302277 292 + 192294377 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTATACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACAAAAGAAAAATTTTAAGGGAGCTCTTTAata-atacaaac----atatatat------acacacacatacacacatatataacatgt-------atatatgttacatgggatagacacaga----tttaacatg-ttatatctatatttg----------tatctat------ctatatctatatgtatctacatttctatatgtttactcagttatgtaaatatagactggaataaatataaagacacatat i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784137 292 + 3123512 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTATACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACAAAAGAAAAATTTTAAGGGAGCTCTTTAata-atacaaac----atatatat------acacacacatacacacatatataacatgt-------atatatgttacatgggatagacacaga----tttaacatg-ttatatctatatttg----------tatctat------ctatatctatatgtatctacatttctgtatgtttactcagttatgtaaatatagactggaataaatataaagacacatat i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504817 292 + 10077455 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTATACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACAAAAGAAAAATTTTAAGGGAGCTCTGTAATA-ACACAAAC----atatatatgaac--acacacacatatacacatatataacatgt-------atatatgttacatgggatagatacaga----tttaacatg-ttatatctatatttg--------------tat------ctatatctatatgtatcaacatttctatatgtttactcagttatgtaaatatagactggaataaatataaagacacatat i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710499 290 + 127223203 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTATACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACAAAAGAAAAATTTTAAGGGAGCTCTTTAATA-ACACAAAC----atatatat--ac--acacacacatatacacatatataacatgt-------atatatgttacatgggatagatacaga----tttaacatg-ttatatctatatttg--------------tat------ctatatctatatgtatctacatttctatatgtttactcagttatgtaaatatagactggaataaatataaagacacatat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171082 293 - 1799296 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTA-ACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACAAAAGAAAAATTTTAAGGGAGTTCTGTAATA-acacaaac----atatatat--ac--acacacacatatacacatatataacatgt-------atatatgttacatgggatagatacaga----tttaacatg-ttatatctatatttg----------tatctat------ctatatctatatgtatctacatttctatatgtttactcagttatgtaaatatagactggaataaatataaagacacatat i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754329 296 + 6934359 TCAGTATTAAAACTAGTGTAAATATTTGCATGTTTATACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAAT----GAAAAATGTTAAGGGAGCTCTTTAATA-ACACAAAC----atatatat--ac--acacacacatatacacacatataacatgt-------atatatgttacatgggatagatacaga----tttaacatg-ttatatctatatttg----------tatctatctataactatatctatatgtatctacatttctatatgtttactcagttatgtaaatataGACTGGACTAAATATAAAGACACATAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108114070 289 - 128169293 TCAGTATTAAAACTGGTATAAACATTTGCATTTTTATACAACGAAAATTCAAGCTCAACCTAAAAACACATAAGAAA------AAGAATTTTAAGGGAGCTCTTTAATACacacacacacatatatatat--ac--------acacatacacacatgtaacatgc-------atatatTTTATATGG----GATATAGT----TTTAACATG-TTATATCGATATTTGT------ATATCTCTAT----AACTATATCCATATGTATCTACATTTCTATATATTTACTCAGTTATAtaaagatagattggaataaatgtaaaggcacatat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731413 286 - 18371965 TCAGTATTAAAACTGGTATAAACATTTGCATTTTCATACAATGAAAATTCAAGCTCAACCTAAAAACACATAAGAAA------AAGTATTATAAGGAAGCTCTTTAatacacacacac----atatgtat--at--------acacatacacacatata--atgt-------atatatattatatgggatagatatagt----tttaacatg-ttatatcgatatttgt------atctatctat----aactatattcatatgtatctacatttctatatatttactcagttatataaagataaatTGGAGTAAATACAAAGGCACATG- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390966 266 + 3566421 TCAGTATT-AAACTGGTATAAACATTTGCATTTTTATACATCGAAAATTCAAGCTCAACCTAAAAACACATAAGAAA------AAGAATTTTAAGGGAGCTCTTTAATACACACACAC----atatgtat--at--------atacacacacacatataacatgt-------atatatattatatgggatagatttagt----tttaacatg-t----------------------------tat----aactatatacatatgtatctacatttctatatatTCATTCAGTTCTATAAAGATAGATTGGAATAAATATAAAGGCACATAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892772 277 - 9267652 TCAGTATA-AAACTGGTATAAACATTTGCATTTTTATACAACAAAAATTCAAGCTCAACCTAGAAACACATAAGAAA------AAGAATTTTAAGGGAGCTCTTTAATacacacacac--------------ac--------acacacacacacacacaACATGT-------Gtata---tatatgggatagatatagt----tttaacatg-ttatatcgatatttgt------atctatctat----aactatatccatatgtatctacatctctatatATTTACTCAGTTATAtaaagatagattggaataaatataaaggcacatat i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753680 308 + 14340318 TCAGAATCAAAATTAGAATCAATATTCAAGTTTGTATAATAGGAAAATTCAGGCTTAACCAAAAAATCTATAGAAAATGGAAGAAAAATT-TAAGGTAGCTGTTTAATA-ACATATAG----ACACACAT--AT---------AACATATAGATGAATAAGATGTGCTACCCACATGCATTATTTGAGATGGACACATATACCTTTAGTATGCTTATATTTGTACCTATTAAAAACTATATTCAT----GTCTATATCTGTATGTGTGTATATATATATA-ATTTACTCAGTTAAATAAATGTAGACCTGA-TAAATATAAAGACACATAT i otoGar3.GL873564 I 622 I 477 a score=107086.000000 s hg38.chrUn_KI270746v1 7397 9 + 66486 GATTCTTGG s panTro5.chr2A 90267881 9 + 111504155 GATTCTTGG i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521502 9 - 162613886 gattcttgg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 130615 9 + 150013 GATTCTTGG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 216812 9 + 1200634 GATTCTTGG i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133472885 9 - 185818997 GATTCTTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302569 9 + 192294377 GATTCTTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784429 9 + 3123512 GATTCTTGG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505109 9 + 10077455 GATTCTTGG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710789 9 + 127223203 GATTCTTGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171375 9 - 1799296 GATTCTTGG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754625 9 + 6934359 GATTCTTGG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108114359 9 - 128169293 tattcttgg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731699 8 - 18371965 -ATTCTTGG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391232 9 + 3566421 GATTCTTGG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893049 9 - 9267652 gattcttgg i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12754465 9 + 14340318 GGTCCTTGG i otoGar3.GL873564 I 477 C 0 a score=2865.000000 s hg38.chrUn_KI270746v1 7406 1 + 66486 A s panTro5.chr2A 90267890 1 + 111504155 A i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521511 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 130624 1 + 150013 A i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 216821 1 + 1200634 A i nomLeu3.chr4_GL397525_2_random C 0 C 0 s cerAty1.NW_012000909v1 2505118 1 + 10077455 A i cerAty1.NW_012000909v1 C 0 I 4 s calJac3.chr8 108114368 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731707 1 - 18371965 A i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391241 1 + 3566421 A i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893058 1 - 9267652 a i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12754474 1 + 14340318 A i otoGar3.GL873564 C 0 C 0 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302578 0 + 192294377 C a score=211641.000000 s hg38.chrUn_KI270746v1 7407 62 + 66486 TAAAAAGGATTTAGTATCATAAAAACAAATTCTTTCCAAATTCACCTATGAATTCACAACAA s panTro5.chr2A 90267891 62 + 111504155 TTAAAAGGATTTAGTATCATAAAGACAAATTCTTTCCAAATTCACCTATGAATTCACAACAA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521512 62 - 162613886 tagaaaggatttagtatcataaagacaaattctttccaaattcatctatcaattcacaacaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 130625 62 + 150013 TAAAAAGGATTTAGTATCACAAAAACAAATTCTTTCCAAATTCACCTATGAATTCACAACAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 216822 62 + 1200634 TAAAAAGGATTTCGTATCATAAAGACAAATTCTTTCCAAATTCACCTATCAATTCACAACAA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108114369 62 - 128169293 taaaaaggatttggtatcataaggacaaattctttccaaattcacctatcaattcacaacaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731708 62 - 18371965 TAAAAAGGATTTGGTATCATAAAGACAATTTTTTTCCAAATTCATCTATCAATTCACAACAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391242 62 + 3566421 TAAAAAGGATTTGGTATCATAAAGACAAATTCTTTCTAAATTCATCGATCGATTCACAACAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893059 62 - 9267652 tgaaaaggatttggtatcataaagacaaattctttccaaattcatctatcgattcacaacaa i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12754475 61 + 14340318 TAAAAATGATTTGGAATTATAGAGAC-ACTTCCTCCCAAATTTATCTATCAATTTATTACAA i otoGar3.GL873564 C 0 I 164 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302578 0 + 192294377 C a score=-2814.000000 s hg38.chrUn_KI270746v1 7469 1 + 66486 T----- s panTro5.chr2A 90267953 1 + 111504155 T----- i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521574 6 - 162613886 tgccag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 130687 1 + 150013 T----- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 216884 1 + 1200634 T----- i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108114431 6 - 128169293 tgccag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731770 6 - 18371965 TGCCAG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391304 6 + 3566421 TGCCAG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893121 6 - 9267652 tgccag i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12754536 164 + 14340318 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302578 0 + 192294377 C a score=1148853.000000 s hg38.chrUn_KI270746v1 7470 381 + 66486 ATACAGTTTCATTAGTATAATTTAAAAT-TTTTAAATAAATTCCAAGATTCATTTAAAGGAATATACATATATACAAGCAGTCAAGAAAGAAGC--AAGAATGCACTAA------ACTAACTTGCTATT-GAAATACATTTTTAAACTTAGTAACTAAAACTGAGCAGTACTGATTT-GGAGTAGTGGAACTTAGGTATATGGGATCTCAAAAGCACAGA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGATGTGCTTTAGAAGGCATTACCAAACCACGGGC--AAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAGACTCAAGGCCACCATATAAGAGCAAAACA---AAAGGACAGGGAGAGAATGTGAA s panTro5.chr2A 90267954 381 + 111504155 ATACAGTTTCATTAGTATAATTTAATAT-TTTTAAATAAATTCCAAGATTCATTTAAAGGAATATACATATATACAAGCAGTCAAGAAAGAAGC--AAGAGAGCACTAA------ACTAACTTGCTTTT-AAAATACACTTTTTAACTTAGCAACTAAAACTGTGCAGTACTGATTT-GGAGTACTGGAATTTAGGTATATGGGAACTCAAAAGCACAGA-GCTCAAAG---------GAGACCGCTGTATGCACGAGAGCTTAGGATGTGCTTTAGAAGGCATTACCAAACCACGGGA--CAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAAAAAAGACTCAAAACCACCATATAAGAGCAAAACA---AAAGGACAGGGAGAGAATGTGAA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521580 381 - 162613886 atacagttccattagTGTAATTTAAAAA-TTTTAAATAAATTCCAAGATTCATTTAAAGGAATATACATGTATACCAGCAGTAAAGAAAGAAGC--AAGAGTGCACTAA------ACTAACTTGCTATT-AAAATAAATTTTTAAACTTAGTAACTAAAACTGAGCAGTACTGATTT-GGAGTACTGGAATTTAGGTATATGGGATCTCAATAGAATAAA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGATGTGTTTTAGAAGGCATTACCAAACCACGGGC--AAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAGATTCAAGGCCACCATATAAGAGCAAAACA---AAAGAACAGGGAGAGAATGTGAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 130688 381 + 150013 ATACAGTTTCATTAGTATAATTTAAAAT-TTTTAAATAAATTCCAAGATTCATTTAAAGGAATATACATGTATACAAGCAGTCAAGAAAGAAGC--AAGAGTGCACTAA------ACTAACTTGCTATT-AAAATACATTTTTAAACTTAGTAACTAAAACTGAGCAGTACTGATTT-GGAGTACTGGAATTTAGGTATATGGGATCTCAAAAGCACAGA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGAAGTGCTTTAGAAGGCATTACCAAACCACGGGC--AAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAACAGACTCAAGGCCACCATATAAGAGCAAAACA---AAAGGACAGGGAGAGAATGTGAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 216885 381 + 1200634 ATACAGTTTCATTAGTATAATTTAAAA--TTTTAAAGAAATTCCAAGGTTCATTTATAGGACTATACATGTATACCAGCAGTAAAGAAAGAAGC--AAGAGTGCACTAA------ACTAACTTGCTATTAAAAATACATTTTTAAACTTAGTAACTAAAACTGAGCAGTACTGATTT-GGAGTACTGGAATTTAGGTATATGGGATCTCAAAAGCATAGA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGATGTGCTTTAGAAGGCATTACCAAACCACGGGC--AAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAGACTCAAGGCCACAATATAAGAGCAAAACA---AAAGGACAGGGAGAGAATGTGAA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108114437 381 - 128169293 atacaatttcattagtataatttaaaa--tttttaa-aaCTCCCAAGATTCATTTAAAGGAATAAACATGTATTCCAGCAGTAAATAAAGAAGC--AAGAGTACACCAA------ACTAACTTGCTGTT-AAAATAAATTTGTAAACTTAGTAACTAAAGCTTTCCAGTCCTGATTT-GGAGTACTGGAATTTAGGTATATGGGATCCCAATAGAATAAAGGCTTAAAA---------TAGACCCTTCTATGCATGAGAGCTTAGGATGTGCTTTAGAAGTCATTGCCAAACCACTGTC-AAAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAGACTCAAGGCTACCCTATGAGAGCAAAACA---AAAGGACAGGGAGAGAATGTGAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731776 388 - 18371965 ATACAATTTCATTAGTATAATTTAACA--TTTTAAATAACTCCCAAGATTCATTTAAATCAATAAACACGTATACCAGCAGTAAAGAAAGAAGC--AAGAGTACACTAAACTAGTACTAACTTGCTATT-AAAACAAATTTGTAAACTTAGTAACTAAAGCTTTCCAGTCCTGATTT-GGAGTACTAGAATTTAGTTATATGGGATCCCAATAGAATAAAGGCACAAAG---------TAGACCCTTCTTTGCACGAGAGCTTAGGATGTGCTTTAGGAGTCACTGCCAAACCACTGTC-AAAAATTACTTTAGTGTGTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAAACTCAAGGCTACCCTGTGAGAACAAAATA---AAAGGACAGGGAGAGAATGTGAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391310 388 + 3566421 ATACAATTTTATTCGAATAATTTAAAA--TTTTAAATAACTCCCAAGATTCATTTAAAGGAATAAACATGTATACCAGCAATAAAGAAAGAAGC--AAGAGTATACTAAACTAGTACTAACTTGCTATT-AAAATAAATTTGTAAACTTAGTAACTAAAGCTTTCCAGTCCCAATTT-GGAGCACTAGAATTTAGGTAGATGGGATCCCAATAGAATAAAGGCCCCAAA---------TAGACCCTTCTATGCACGAGAGCTTAGGATGTGCTTTAGAAGTCATTGCCAAACCACTGTC-AAAAGTTACTTTAGTATCTTAGTCTTACTAGGTTTGAAAAACCAGAGAAAGTTCTCAAGACTACCCTATGAGAACAAAACA---AAAGCACAGGGAGAGAATGTGaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893127 382 - 9267652 gtacaatttcattagTATAATTTAAAA--TTTTAAATAACTCCCAAGATTCATTTGAAGGAATAAACTTGTATACCAGCAGTAAAGAAAGAAGC--AAGAGTACACTAA------ACTAATTTGCTATT-AAAATAAATTTGTAAATTTAGTAACTAAAGCTTTCCAGTACTGATTT-GGAGTGCTGGAATTTAAGTATGTGGGATCCCAATAGAATAAAGGCTCAAAA---------CAGACCCTTCTATGCACGAGAGCTTGGGATGTGCTTTAGAAGTCATTTCCAAACCACTGTC-AAAAGTTACTTTAGTGTCTTTGTCTTACTAGGTTTGGAAAGCTAGAGAAAAGACTCAAGGCTACCCTATGAGAACAAAATA---AGAGGACAGGGAGAGAATGTGAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12754700 395 + 14340318 ATAAAATTTTCTCAGTATTATTTAATGAGTTTTCAATAGCACCC-AGATTCATTTAAAAGAACAAATATATGTATCAGGAGGAAAGAAAGAAACAAAAGAGAACACTGA------AATAAATTGCTATT-GAAAAAAAGATCAAACGTTGAGAATTAAAACTACATAGTACTGACTTAGGAGTATTAGAATTGGGGTATATTTGGACTTAA---AATAAGGGCTAAAAGTAGATCAAATAGACCGATCTATGCACGGGAGTTTAGGGTACTACTTAGGTGACATTGTAAGACTATGGGGAAAAAATTAGGTTACGATCTTAGTCTTACTGGGTTTGAAGAGTCAGAGGAAAGACTCAAGGCCACAATACAACAGCAAAAGAATCAACAGACAGGGAGAG-ATGTGGA i otoGar3.GL873564 I 164 I 401 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302578 0 + 192294377 C a score=18237.000000 s hg38.chrUn_KI270746v1 7851 9 + 66486 GACATTGAA s panTro5.chr2A 90268335 9 + 111504155 GATACTGAA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521961 9 - 162613886 GATATGGAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 131069 9 + 150013 GACACTGAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 217266 9 + 1200634 GATACTGAA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108114818 9 - 128169293 GATATTTAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732164 9 - 18371965 GATACTTAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391698 9 + 3566421 ggtacttca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893509 9 - 9267652 GATACTGAA i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12755095 401 + 14340318 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302578 0 + 192294377 C a score=1363860.000000 s hg38.chrUn_KI270746v1 7860 475 + 66486 ACATTTTACATAAAGTTGTATAAAACATCCTTTAA-AAAAATGTAAAGTTTAGGATATACATCAAAATCAGCAGAGCCACTGAATAAATAATTAGGCATTGTAAAATAGCAAGAGAAAATTTAAATGGATTTCTAAAAAATA-TTGACACCCATGATTTTTAAAATATGTTTA-------------------------AGAAATCCCATATTTCACAGGGCAGCCTTTCCCAACACAAATATGTTAGGACATAAAGGTCCTTCTGTTTTTAATTTACTAGTGTTTATAGGGTT-ACAAA-TGTCTTCTACCCTTGTCTTTTGTCTGAAGGTGCAAAAAATTTCCATAAGCATGTATTTCTGAATGCCTGATGGATTGACATATATAATATGCTGCTAGTATTAAAATATGTGATGGAAAACACATCCAATCTTCTCACTGTTTGCATAAATTCTAGGTTTCTCCTATTTACCTCAAGCACGT-Atggagccaattcttac---------------------------------------------------ctttt------ s panTro5.chr2A 90268344 476 + 111504155 acattttacataaagttgtataaaacatcctttaaggaaaatgtaaagtttaggatattcatcaaaatcagcagagccactaaataaataaataggcattgtaaaataacaagagaaaatttaaatggatttctaaaaaata-ttGACACCTATGATTTTTAAAATATGTTTA-------------------------AGAAATCCTGTATTTCACAGGGCAGCCTTTCACAACACAGATATTTTAGGACATAAAGGTCTTTCTGTTTTTAATTTACTAGTGTTTATAGGGTT-ACAAA-TGTCTTCTACCCTTGTCTTTTGTCTGATGGTGCAAAAAATTTTCATAAGCATGTATTTCTGAATGCCTGATGGATTGACATATATAATATGCTGCTAGTATTAAAATGTGTGACATAAAACGCATCCAATCTTCTCACTGTTTACATAAATTCTAGGTTTCTCCTATTTACCTCAAGCACGT-Atggagcgaattcttac---------------------------------------------------cttgt------ i panTro5.chr2A C 0 C 0 s panPan2.chr7 108521970 475 - 162613886 ACATTTTACATAAAGTTGTATAAAACATATTTTAAAGAAAATGTAAAGTTTAGGATATACATCAAAATCAGCAGAACCACTAAATAAATAAATAGGCATTGTAAAATAGCAAGAGAAAATTTAAATGGATTTCTAAAAAATA-TTGACACCTATGATTTTAAAAATATGTTTA-------------------------AGAAATCCCGCATTTCACAGGGCAGCCTTTCACAACATAGAGATATTAGGACATAAATGTCCTTCTGTTTTTAATTTACTAGTGTTTATAAGGTT-AAAAA-TGTCTTCTATCCTTGTCTCTTGTCTGATGGTGCAAAAAATTTTCATAAGCATGTATTTCTGAATGCCTGATGGATTGACATATATAATATGCTGCTAGTATTAAAATATGTGATGGAAAACGCATCCAATCTTCTCACTGTTTACATAAATTCTAGGTTTCTCCTATTTACCTCGAGCACAT--tggagtgaattcttac---------------------------------------------------atttt------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 131078 475 + 150013 ACATTTTACATAAAGTTGTATAAAACATCCTTTAAAGAAAATGTAAAGTTTAGGATATACATCAAAATCAGCAGAGCCACTAAATAAATAAATAGGCATTGTAAAATAGCAAGAGAAAATTTAAATGGATTTCTAAAAAATA-TTGACACCCATGATTTTTAAAATATGTTTA-------------------------AGAAATCCCATATTTCACAGGGCAGCCTTTCCCAACACAAATATGTTAGGACATAAAGGTCCTTCTGTTTTTAATTTACTAGTGTTTATAGGGTT-ACAAA-TATCTTCTACCCTTGTCTTTTGTCTGAAGGTGCAAAAAATTTTCATAAGCATGTATTTCTGAATGCCGGATGGATTGACATATATAATATGCTGCTAGTATTAAAATATGTGATGGAAAA-ACATCCAATCTTCTCACTGTTTGCATAAATTCTAGGTTTCTCCTATTTACCTCAAGCACGT-Atggagccaattcttac---------------------------------------------------ctttt------ i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 217275 474 + 1200634 acattttccataaagttgtataaaacatactttaaagaaaatgtaaagtttaggatatacatc--aatcagcagaaacactaaataaataaataggcattgtaaaatagcaagagaaaatttaaatggatttctaaaaaata-ttGACACCTATGATTTTTAAAATATGTTTA-------------------------AGAAATCCCGTATTTCACAGGGCAGCCTTTCACAACATAGATATATTAGGACATAAAGGTCCTTCTGTTTTTAATTTACTAGTGTTTATAGGGTT-AAAAA-TGTCTTCTACCCTTGTCTTTTATCTGATGGTGCAAAAAATTTTCATAAGCATGTAATTCTGAATGCCTGATGGATTGACATATATAATATGCTGCTAGTGTTAAAATATGTGACGGAAAACGCATCCAATCTTCTCACTGTTTACATAAATTCTAGGTTTCTCCTATTTACCTCAAGCACAA-Atggagcgaattcttac---------------------------------------------------atttt------ i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108114827 511 - 128169293 acattttacatgaagttgtataaaacttactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagcagaaccactaaataaataaataggcattgtaaaatagcaatagaaaatttaaatggatttctaaaaaATA-TCGACACCTATGATTTTTAATATATGTTTA-------------------------AAAAATCCTGTATTTCATAGGGCAGCCTCCCACAACATAAATACATTAGGACATTAATGTCCTTCTGTTTTTAATTTACTAGTGTTTCTATGGTT-AAAAA-TGTCTT-----CTTGTCTCTTTTCTTGTGGTGC-AAAA--TTTCATAAGCATGTATTTCTGAAGGTCTGATAGATTGACATATATAACATGCTGCTAGTATTAAAACATGTGACTGAATACGCATCAAATCTTCCCACTATTTACATAAATTCTAGGTTTCTCCTATTTACCTTGAGCACAT-ATGGAGTGAATTCTTAA--------CTTTTTTTCTTTTTTTGAGCCGGAGTGCGGGCCAaattcttacatttt------ i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732173 545 - 18371965 acattttatgtgatgatgcataaaacttactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagcagaaccactaaataaatgaataggcattgtaaaatagcaatagaagatttgaatagatttctaaaaaata-ttGACACCTATGatttttaatatatttttaacatatatttttatatttttaatataaaaatCCCATATTTCACACGGCAGCCTCCCACAACATAAAGACATCAGGACATTAATCTCCTTCTGTTTTTAATTTACTAGTGTTTATATGGTT-AAAAA-TGTCTTCTATCCTTGTCTCTTTTCTTGTGGTGCAAAAA--TTTCATAAGCATGTATTTCTGAAGGCCTGATGGATTGACATATATAACATGCTGATAGTATTAAAATATGTGACTGAATATGCATCAAATCTTCCCACTGTTTACATAAATTTTAGGTTTCTCCTATTTACCTTGAGCATAT-ATGGAGTGAATCCTTAC-----TTTTTTTTTTTTTTTTTTTGAGCTGGAGTGCAGGTCgaattcttacatttt------ i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391707 524 + 3566421 acattttacatgaagaggcataaaacctactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagcagaaccactaaataaatgaataggcattgtaaaatagcaatagaagatttaaatggatttctaaaaaATA-TCGACATCTATGATTTTTAACATATGTTTA-------------------------AAAAGTCCCGTATTTCACAGGGCGGCCTCCCACAACATAAATACATTAGGACATTAATGTCCTTCTGTTTTTAATTTACTAGTGTTTATATGGTTAAAAAA-TGTCTTCTATCCTTGTCTCTTTTCTTGTGGTGCAGAAA--TTTTATAAGCATGTATTTCTGAAGGCCTGATAGATTGTCATATATAACATACTGCTAGTGTTAAAATATGTGGCTGAATATGCATCAAATCTTCCCACTGTTTACATAAATTCTA--TTTCTCCTATTTACCTTGAGCACAT-ATGGAGTGAATTCTTGCttttttttttttttctttttttttGAGCCAGAGTGCAGGCCgaattcttacatttt------ i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893518 517 - 9267652 acattttacatggagttgtataaaactgactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagcagaaccactaaataaatgaataggcattgtaaaatagcaatagaagatttaaatggatttctaaaaaATA-TCGACACCTATGATTTTTAATATATGTTTA-------------------------AAAAATCCCGTATTTCACAGGGCAGCCTCCCACAACATAAATACATTAGGACATTAATGTCTTTCTGTTTTTAATTTACCAGTGTTTATATGGTT-AAAAA-TGTCTTCTATCCTTGTCTCTTTTCTTGTGGTGCAAAAA--TTTCATAAGCATGTATTTCTGAAGGCCTGATGGATTGACATATATAACATGCTGCTAGTATTAAAATATGTGACTGAATATGCCGCAAATCTTCCCACTGTTGACATACATTCTAGGTTTCTCCTATTTACCTTGAGCACAT-ATGGAGTGAATTCTTAC--------TTTTTTTTTTTTTTTTGAGTCGGAGTGCGGGCCgaattcttacatttt------ i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12755496 377 + 14340318 ACATCATACATGTGGTTGTATAAAATTCATTTTACAGAAACTTAATAATTAAGGATATTGATTATAATCTGTAGAAAAACTG-CTAAATAAATAGGCACTGTAAAATGACCATATCAAATTTAAATGGATTTCTTAAACAGAGTTGGGAA----------TAAAATGTCTTTA-------------------------A------------------------------------------------------AGGTTCTTTTTCTTTTCAACTAAGT--TGTTTATATAGTT-AAAAAGTGTCTTCTATTCTTGTCTCTTTGCTTATGTTCCAGAAA-TTTTCATTGGCATGTTTTTATGAAG------------------------ACACTGCTGTTCCTGAAATGTGTGATTGAATATGTATCAGATCTCTTCGCTGTTCA----------------TTCACATTTACCTGGAGGACACGACACGTCGAGATCTCAC---------------------------------------------------ACTTTCCTCCT i otoGar3.GL873564 I 401 I 135 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302578 0 + 192294377 C a score=171166.000000 s hg38.chrUn_KI270746v1 8335 70 + 66486 aatattgccatggcattcacattgaacgtaagtcaaactctctcatatggtagctgggttcagattgcct s panTro5.chr2A 90268820 70 + 111504155 aatattgccatggcattcacattgaacataagttgaactctctcatatggtagctgggttcagattccct i panTro5.chr2A C 0 C 0 s panPan2.chr7 108522445 70 - 162613886 aatgttgccacggcattcacattgaacgtaagttgaacgctgtcatgtggtagctggcttcagcttccct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 131553 70 + 150013 aatattgccatggcattcacattgaacgtaagtcgaactctctcatatggtagctgggttcagattccct i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 217749 70 + 1200634 aatattgtcatggcattcacattgaacgtacgttgaactctctcatatggtagctgggttcagattccct i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108115338 70 - 128169293 tatgttaccgtggcattcacattgaatgtaagttgaactctcttatatggtagttgagttcagtttccct i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732718 69 - 18371965 tatgttgccgtagcattgacgttgaat-taagtcgaactctcttacatggtagttgggttcagtttccct i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392231 69 + 3566421 tatgttgctgtaccattcacgttgaat-taagttgaactctcttatgtggtagctgggttccgtgtcctt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894035 69 - 9267652 tctgttgccgtagcatacacgttgaat-taagttgaactctcttatatggtagttgggttcagtttccct i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12755873 135 + 14340318 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302578 0 + 192294377 C a score=358660.000000 s hg38.chrUn_KI270746v1 8405 140 + 66486 tgacaatttcca-gttctaac---cctcacagtttctcagtatggct-ggcccagaaattcaccctacacagttgcctcctcctggtgaatacccgctacagaactgttggatacaacctacctgactcaccccacagacctcac s panTro5.chr2A 90268890 140 + 111504155 tgacaatttcca-gttctaac---cctcacatttcctcagtgtggct-ggcccagatattgaccctacacagttgcctcctcctggggactaccagctatggaaccgttggatataacctacctgactcaccccacagacctcac i panTro5.chr2A C 0 C 0 s panPan2.chr7 108522515 141 - 162613886 tgacaatttcca-attctaac---cctcccagttcctcagtgcggctgggcccagatattgaccctacacagttgcctcctcctggtgactacccgctatggaacctttggatacaacctacctgactcaccccacagacctcAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 131623 139 + 150013 tgacaatttcca-gttctaac---cctcacagtttctcagtatggct-gg-ccagaaattcaccctacacagttgcctcctcctggtgaatacccgctacagaaccgctggatacaacctacctgactcaccccacagacctcac i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 217819 140 + 1200634 tgacaatttcca-gttctaac---cctcacagttcctcagtgtggct-ggcccagatattgaccctacacagttgcctcctcctggggactacccgctatgaaaccgttggatacaacctatctgactcaccccacagacctcac i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108115408 137 - 128169293 tgacagtttcca-gttctaaccctcctcccagttcctcagt-------ggcccagataccgaccctgaacagttgcttcctcctggtgactagctgctatggaatgactggttataacctacctaactcaccctgcagacctcac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732787 137 - 18371965 tgacagtttcca-gttctaaccctcctcccagttcctcagt-------ggcccagatattgaccctaaacagttgccttctcccggtgactcgctgctacggaatgactggatataacctacctaactcaccctatggacctcac i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392300 137 + 3566421 ggacagcatccg-gttctaatcctcctcccagttcctcagt-------ggcccagatattgaccctaaacagttgccttctcctggtgactagctgctatggaaagactggatatcacctacctaactcaccctacagacctcac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894104 137 - 9267652 tgacagagtcca-gttctaaccctcctcccagttcctcagt-------ggcccagatattgaccccaaacagttgccacctcctggtgactagctcctatggaatgactggatataatctatctaactcacccgacagacctcac i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12756008 125 + 14340318 TGACCCTCCCTATGGtccagc---tccccca-tttctcagtgtgtg--ggacctgatgtccactcc-catggtagctgcctcctggtgaccctcc-ctgtggcctagctggatatgacctactggactttccc------------ i otoGar3.GL873564 I 135 C 0 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302578 0 + 192294377 C a score=297971.000000 s hg38.chrUn_KI270746v1 8545 139 + 66486 agcccacatggacagcccccacacgccagagtgac--ctgctcagttgcagcggga-gccaagaaatgtgcctgctggcactcactccaccgactagag--ccccatgggaaacttatttgggtaatgatctggtcccaataaa- s panTro5.chr2A 90269030 139 + 111504155 agcgcacatggacagcccccacacgccagagtgac--ctgctcggttgcagcggga-gtcaagaaatgtgcctgctggcactcaccccaccgactagtg--ccccgtggaaaacttatttgggtaatgttctgggcccaatgaa- i panTro5.chr2A C 0 C 0 s gorGor5.CYUI01000341v1 131762 138 + 150013 agcgcacatggacagcccccacacgccacagtgac--ctgctcagttgcagcggga-gccaagaaatgtgcctgctggcactcaccccaccgactagag--ccccgtggaaaacttatttgggtaatgttctgagccc-ataaa- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 217959 139 + 1200634 agcccacatggacagcccccacacgtcagagtgac--ctgctcagttgcagcagga-gccaagaaatgtgcctgctggcactcactccaccgacaagag--ccccgtggaaaacttatttgggtaatgttctggtcccaataaa- i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108115545 140 - 128169293 aacccacacggacagtccacccatgccagactgac--ctgctcagttacagcgggaccccagggaatgtgcctgccggcactcacctcaccaactaaag--ccctgtgagaaacttgtatggctaatgttccgagtccagtaaa- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732924 139 - 18371965 agcccgcatggacagtccacccatgccagagtgac--ctgctcagttacagcaggaccccagggaatgtgcctgctggcactcaaccc-ccaactagag--ccctgtgagaaacttgtttggctaatgttccgagtccagtaaa- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392437 140 + 3566421 agcctacatggacagtccacccatgccagagtgac--ctgctcagttacagtgggaccccagggaatgtgcctactggcactcaccccaccaactagag--ccccgtgagaaacttgtttggctaatgttccgagtcccgtaaa- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894241 140 - 9267652 agcccacatggacagtccactcatgccagagtgac--ctgctcagttacagtgggaccccagggaatgtgcctgctggcactcaccccatcaactagag--ccccgtgagaaacttgtttggctaatgttccgagtccagtaaa- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12756133 143 + 14340318 --cccacaagggctgggcacatgagtcacagagaccacctctcagtcacagaatgactctggagctcacgcctgcctacaccaagcccacctgttacaagtccccatggaaaatctgcttacagaatgtcttgggccctggtcac i otoGar3.GL873564 C 0 C 0 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e panPan2.chr7 108522656 0 - 162613886 C e macFas5.chr3 67302578 0 + 192294377 C a score=132940.000000 s hg38.chrUn_KI270746v1 8684 40 + 66486 ggctggagtcccacagaccccttttctctctcctgctccc s panTro5.chr2A 90269169 39 + 111504155 gtctggagtcccacaga-cccttttctctctccagctccc i panTro5.chr2A C 0 C 0 s panPan2.chr7 108522656 40 - 162613886 GGCTGGAGTCCCACAGACCCCTTTTCTCTCTCTTGCTCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 131900 40 + 150013 ggctggagtcccacagaccccttttctctctcctgctccc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 218098 40 + 1200634 ggctggagtcccacagaccccttttctctctcttgctccc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108115685 40 - 128169293 gactggagtcccacagaccccttctgtctctcttgctccc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733063 40 - 18371965 gactagagtcccacagacctcttctgtctctcttgctccc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392577 40 + 3566421 gactggagtcccacagaccccttctgtctctcttgctccc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894381 40 - 9267652 gactggagtcccacagaccccttctgtctctcttgctccc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12756276 40 + 14340318 agctttagtcccactgattctctctctctctcatcccccc i otoGar3.GL873564 C 0 I 1514 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302578 0 + 192294377 C a score=1131905.000000 s hg38.chrUn_KI270746v1 8724 433 + 66486 cactcATTTTCCCCATTTTGTTCAGCCCTATGAGGTATGCTACtgtattagtccattttcacaccactggtaaagacatgcccaagactgggtaatttccagaagaaagaagtttaatagacgcacagttctacatggctggataggcctcacaatcatggtgcaaggtgaaaggcatgtctcacatggcagcagacaagacaagagagcttgtgcagggaaactcccctttataaaaccaacagatcttgtgagacttattcactatcagaagaacagcatgggaaagacctgcccccatgattcaattacctcccacctgttccctcccacaacatgtgggaattcaagatgagatttggctggggacacagctaaaccCTCTTCTCAgctaccctcttctctctggatctgtgagtaataaacctacttc s panTro5.chr2A 90269208 433 + 111504155 cactcATCTTCCCCATTTTCTTCAGCCTTGTAAGGTGTGCTACtgtattagtccattttcacactgccggtaaagacatgcccaagactgggtaatttccagaagaaagaggtttaatagacacaaagttccacatagctgggtaggcctcacaatcatggtgcaaagtgaaaggcacgtctcacatggcagcagacaagaaaagagagcttgtgcagggaaactcctctttgtaaaaccatcagatcttgtgaggcttattcactatcagaagaacagcatgggaaagacctgcacccatgattcaatttcctcccacctgttccctcccacaacatgtggcaattcaagatgagatttggctggggacacaactaaaccCTCTTCTCAgctaccctcttctctctggatctgtgagtaataaacctacttc i panTro5.chr2A C 0 C 0 s panPan2.chr7 108522696 433 - 162613886 CACTCATCTTCCCCGTTTTGTTCAGCCCTATGAGGTGTGCTAAtgtattagtccattttcacactgctgataaagacatgcccaagactgggtaatttccagaagaaagaggtttaatagacgtacaattgcatacagctgggtaggcctcacaatcatggtggaaggtgaaaggcacgtctcacatggcagcaaacaagacaagagagcttgtgcaaggaaactcccctttataaaaccatcagatcttgtgagacttattcactatctgaagaacagcatgggaaagacctgcccccatgattcaattacctcccacctgttccctcccataacatgtgggaattcaagatgagatttgtctggggacacagccagaccCTCTTCTCAgcttccctcttctctctggatctgtgagtaataaaactacttc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 131940 432 + 150013 cactcCTCTTCCCCATTTTGTTCAGCCCTATGAGGTGTGCTACtgtattagtccattttcacaccgccggtaaagacatgcccaagactgggtaatttccagaagaaagaagtttaatagacgcacagttctacatggctgggtaggcctcacaatcatggcacaaggtgaaaggcacgtctcacatggcagcagacaagacaagagagcttgtgcagggaaactcccctttatgaaa-caacagatcttgtgagacttattcactatcagaagaacagcatgggaaagacctgcccccttgattcaattacctcccacctgttcccttccacaacatgtgggaattcaagatgagatttggctggggacacagctaaaccCTCTTCTCAgctaccctcttctctctggatctgtgagtaataaacctacttc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 218138 433 + 1200634 cactcATCTCCCCCATTTTGTTCAGCCCTATGAGGTGTGCTACtgtattagtccattttcacaccactggtaaagacgtgcccaagacagggtaatttccagaagaaagaggtttaatagatgcacagttccacatggctgggtaggcctcacaatcatggtggaaggtgaaaggcacgtctcacatagaagcagacaagacaagagagcttgtgcagggaaactcccctttataaaaccatcagatcttgtgagacatattcacgatcagaagaacagcatgggaaagacctgtccccatgattcagttacctcccacctgttccctcccacaacatgtgggaattcaagatgagatttggctggggacacagctaaaccCTCTTCTCGgctaccctcttctctctggatctgtgagtaataaaactacttc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108115725 429 - 128169293 cactcatcttcctcattttgttcagccctatgaggtatgttactgtattagtccgttttcacactgcccataaagacatgcccaagaatgaggaatttacagaagaaacaggtttaacagactcaca-ttccacatggctggggaggcctcacaatcatggtggaaggtgaaaggcacattccacctggcagcagacaagagaagagagcttgtgcagagaacctcccctttataaaagcatcagatcttcggagacttattcaatatcacaataacaggatgggaaagacttgcctccatgattcagttacttcccaccctgtccctcccaaaatatgtgggaattcaagatgagatttggctggggacacagccaaacca---tatcaactaccctcttctctctggatctgtgagtaataaaactgtttc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733103 429 - 18371965 cactcatcttcctcattttgttcagccctatgaggtgtgttactgtattagtccgttttcacactgcccataaagacgtgcccaagactgaggaatttacagaagaaagaggtttaacagacttaga-ttccacatggctggggaggcctcagaatcatggcagaaggtgaaaggcatgtctcacgtggcagcagacaagagaagagagcttgtgcagggcaactcccctttataaaagcatcagatcttgggagacttattcaatatcacaagaacaggatgagaaagacctgcccccatgattcagttacttccaaccctgtccctcccaaaatatatgggaattcaagatgagatttggctggggacacagccaaacca---tatcacctaccctcttctctccggatctgtgagtaataaaactgtttc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392617 356 + 3566421 tcctcatcTTCCTCATTTTGTTCAGCCCTATGAGGCGTGTTACtgtattagtccgttttcacgctgcccataaagacatgcccaagactgaggagttgacagaagaaagaggtttaacagacttaca-ttccacatggctggggaggcctcacaatcacggtggatggtgaaaggcatgtctcacgtggcagcagacaagagaagagagcttgtgcagggaaactctcctttataaaagcatcagatcttgggagacttattcaatatcacaagaacaggatgggaaagacctgcctccatgattcagttacttcccaccctgaccctcccaaaatacatggg----------------------------------------------------------------------------aataaaactgtttc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894421 429 - 9267652 cactcatcttcctcattttgttcagccctatgaggtgtgttactgtattagtccgttttcacgctgcccataaagacatgcccaagactgaggaatttacagaagaaagaggtttaacagacttaca-ttccacatggctggggagaccgcgcaatcatgggggaaggtgaaaggcacgtctcacgtggcaacagacaagagaagagacattgtgcagggaaactcccctttataaaagcatcagatcttgggagacttattcaatatcacaagaacaggatgggaaagacctgcccccatgattcagttacttcccaccatgtcccttccaaaatatgtgggaattcaagatgagatttggctggggacacagccaaacca---tatcaactaccctcttctctctggatctgtgagtaataaaactgtttc i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12756316 1514 + 14340318 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302578 0 + 192294377 C a score=2176638.000000 s hg38.chrUn_KI270746v1 9157 782 + 66486 tgtgatttcccatgtttgatcctgtggcctccatgtgtctgagctgagctacactggaacctaactctcctcctggccagggtctctgagagtgg--ctcttgtcagaaatacagaggacacaggtcaggcaacagtcacca-ggcatctcctagtctcaacagatgttctgtgagagggaggcctggtcgtggga---tgcacacctggcca-ctgctggggtaaggaagtgtcctgtgaaaggca----catgttaagcatccacaaccccctgcccagaaccccagaaaggcag---ggct-ccaagtgacagtcactctccagagacaaacctcaagccctaactggaggaaaagaaaaca-ATGTAAAAAGTTGAATTTATCTTACTATTTCAATTATCCAGTAAAGACATTCTATGCCTGTACACCACATATTTTCCTTGATTGTGGATATGTTTTAGATAGAATTTTATGTCTGGTTTTCACTTTAGCCTGGTCCTTATCTCAAGCATAAGGTAAAGATTTTCCATGGGTTCTTTTCTGGTACTACTACCTGCCAGTGTGGGGTCATGTCCTAGTCTATCT---------------------------TGAGGGAACCCCC------------CTATTCATTATT-GTCAGAGTGAGACTGTTAAGTCTTGATTTCCCTGGACAACTTCACTGCATGAC--TTTTAATATGATTTTTTAATGTACCCTTTACTGGAAAATAAATTATATAGTTATCTGAGTAAGAGATATAGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTTTCTTTGGTGAACTTGCATATGTTCTCCTC s panTro5.chr2A 90269641 780 + 111504155 tgtgatgtcccatgtttgttcctgtggcctccatgtctctgatctgacctacactggaacctaactcacctcctggccagggtctctgagagtgg--ctcttgtcagaaatacacaggacataggtcaggcaacagtcacca-ggcatctcctagtctcaacagatgttctgtgagagggaggcctggtcgtggga---tgcaaacctggcca-ctgctggggtaaggaagtgtcctatgaaaggca----catgttaagcatccacaaccccctgaccagaaccccagaaaggcag---ggct-ccaattgacagtcactctccagagacaaacctcaagccctaactggaggaaaagaaaaca-ATGTAAAATGTTGAATTTATCTTACTATTTCAATGCTCCAGTAAAGACATTCTATGCCTGTACACCACATATTTTCTTCAGTTGTGGATATATTTTAGATTGAATCTTATGTCTGGCTTTCACTTTAGCCTGGTCCCTACCTCAAGCATAAGGTAAAGATTTTCCATGGGTTGTTTTCTGGTA-TACTACCTGCCAGTGTGGGGTCATGTCCTAGTCTATCT---------------------------CGAGGGAACCCCC------------CTGTTCATTGTT-GTCAGAGTGAGACTGTTAAGTCTTGATTTCCCTGCACAACTTCACTCCATGAC--TTTTAATATGATTTTTCAATATACCCTTTA-TGGACAATAAATTATATAGTTATCTGAGTAAGAGATATGGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCTTTTTGGTGAACTCGCGCATGTTCTCCTC i panTro5.chr2A C 0 C 0 s panPan2.chr7 108523129 782 - 162613886 tgtgatttcccatgtttggtcctgtggcctccatgtgtgtgatctgacctacactggaacctaactctcctcctggccagggcctctgagagtgg--ctcttgtcagaaatacacaggacacaggtcaggcaacagccacca-ggcatctcctagtctcaacagatattctgtgagagggaggcctggtcgtggga---tacacacctggtca-ctgctggggtaagggagtgtcctgtgaaaggca----tatgttaagcatccacaaccccctgcccagaaccccagaaaggcag---ggct-ccaattgacagccactctccagagacaaacctcaagccctaactggaggaaaattaaaca-ATGTAAAAATTTGAATTTATCTTACTATTTCAATGATCCAGTAAAGACATTCTATGCCTGTACACCACATATTTTCTTCAATTATTGATATATTTTAGATAGAATTTTATGTCTGGCTGTCACTTTGGCCTGGTCCCTATCTCAAGTATAAGGTAAAGATTTTCCATGGGTTCTTTTCTGGTACTACTAACTGCCAGTGTGGGGTCATGTCCTAGTCTATCT---------------------------TGAGGGAACCCCC------------CTATTCATTTTT-GTCAGAGTGAGACTGTTAAGTCTTGATTTCCCTGGACAACTTCACTGCATGAC--TTTTAATATGATTTTTAAATATACCCTTTACTGGACAATAAATTGTATAGTTACCTGAGTAAGAGATATGGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCTATTCGGTGAACTCGCATATGTTCTCCTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 132372 781 + 150013 tgtgatttcccatgtttggtcctgtggcctccatgtgtctgagctgagctacactggaacctaactctcctcctggccagggtctctgagagtgg--ctcttgtcagaaatacacaggacacaggtcaggcaacagtcacca-ggcatctcctagtctcaacagatgttctgtgagagggaggcctggtcgtggga---tgcacacctggcca-ctgctggggtaaggaagtgtcctgtgaaaggca----catgttaagcatccacaaccccctgcccagaacccaagaaaggcag---ggct-ccaattgacagtcactctccagagacaaacctcaagccctaactggaggaaaagaaaaca-ATGTAAAAAGTTGAATTTATCTTACTATTTCAATGATCTAGTAAAGACATTCTATGCCTGTACACCACATATTTTCTTCGATTGTGGATATATTTTAGATCGAATTTTATGTCAGGCTTTCACTTTAGCCTGGTCCCTACCTCAAGCATAAGGTAAAGATTTTCCATGGGTTCTTTTCTGGTACTACTACCTGCCAGTGTGCGGTCATGTCCTAGTCTATCT---------------------------TGAGGGAA-CCCC------------CTATTCATTATT-GTCAGAGTGAGACTGTTAAGTCTTGATTTCCCTGGACAACTTCACTGCATGAC--TTTTAATATGATTTTTTAATATACCCTTTACTGGACAATAAATTATATAGTTATCTGAGTAAGAGATATGGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCTCTTTGGTGAACTCGCATATGTTCTCCTC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 218571 779 + 1200634 tgtgatttcccatgtttggtcctgtggcctccatgtgtctgatctgacctacactggaacctaactctcctcctggccagggtctctgtgagtgg--ctcttgtcagaaatacacaggacacaggtca-gcaacagccatca-ggcatctcctagtctcaacagatgttctatgagagggaggcctggtcgtcaga---tgcacaactggcca-ctgctggggtaaggaagtgtcctgtgaaaggca----catgttaagcatccacaaccccctgctcagaatcccagaaaggcag---ggct-ccaattgacagccactctccagagacaaacctcaagccctaactggtggaaaataaaaca-ATGTAAAAATTGGAATTTGTCTTACTATTTCAATGATCCAGTAAAGACATTCTATGCCTGTACACCACATATTTTCTTCGATTGTTGATATATTTTAGATAGAATTTTATGTCTGGCTTTCACTTTAGCCTGGTCCCTACCTCAAGCATAAGGTAAAGATTTTCCATGGGTTCTTTTCTGGTAATACTACCTGCCAGTGT-CGGTCAAGCCCTAGTCTATCT---------------------------TGAGGGAACCCCC------------CTATTCATTGTT-GTCGGAGTGAGACTGTTAAGTCTTGATTTCCCTGGACAACTTCATTGCATGAA---TTTAATATGATTTTTAAATATGCCCTTTACTGGACAATAAATTATATAGTTATCAGAGTAAGAGATATGGTCAGGAAGAGGCATTGTCTCATTCAGCTTTTCCGTTTGGTGAACTTGCATATGTTCTCCTC i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108116154 772 - 128169293 tgtgatttcccatgtttggtcctgtggcctccatgtgtctgatatgacctgcactggaacctaactctcctcctggccagggtctctgagagtggctctcttgtcagaaatacactggatacaggtcagacaatggcatcca-ggcacctgctagtttcaatggatatt---------------ctggttgtggga---tgcagacatggacc-ctgccggggtgaggaagtgtcctgtgaaaggca----tatgctaagcatccacaaccacctgcccagaaccccagaaaggaag---ggct-tgaatttacagccactctccagacacaaacctcaagccctaattagaggaaaataaaaca-GTGTAAAAATCTGAATTTATCATACTATTTCATTGATCTATTAGAGATATTCCACACCTGTAAACCACATATTTTCTTCGATTGTTAATATAGTTTAGATAGAATTTCATATCT-GCTTTCACTTTGGTCTGGTCTCTACCTCAACTATATAGTAAAGACTTCTGGTGGGTTCTTTTCTTGTACTACTGCCTACCAGTGTGGGGTCATGTCCTCATCTGTCTTGGACTAGGGACACCTAGTCCAATGAATGAGGGAACACCC------------CTGTTCATTATTGGGCAGAGTGAG------------------------ACAACTTCATTGCATGAC--TTCTAATATGATTTTTAAATATACCCTTTACTGGACAATAAATTATATGGTTACCTGAGTAAGAGATATGTCCAGCAAGAGGCATTGCCTCATAGAGCTTTTCTATCTGGTGAACTCACATACATTCACCTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733532 731 - 18371965 tgtgatttcccatgtttggtcctgtggcctccatatatctgatacaacctgcactggaaccttactctcctcctggccagggtctctgagagtggctctcttgtcagaaatacactggatactgattagacaatggtctcca-ggcaactgctagtctcaacggatatt---------------ctgattgtggga---tgcacacctagctt-ctgtcagggtgaggaagtgtcctgtgaaaggca----catgctaagcatccacaaccacctgccaagaaccccagaaaggcag---gact-tgaatttacagccactctccagacacaaacctcaagccctaattagaggaaaataaaacC-AGGTAAAAATTTGAATTTATCGTACAATTTCATCAATCTAT--------------GCCTGTACACCACATATTTTCTTCGACTGTTAATATATTTTGGATAGAATTTCATGTCT-GCTTTTACTTTGATCTGGTCTCTACCTCGACTATATAGTAAAGACTTCCGGTGGGTTCTTTTCTGGTACTACTATCTACCAGTTTGGGGTCATGTCCTAGTCTATCT---------------------------TGAGGGAATCCCC------------CTGTTCATTAATGGGCAGAGCGAG------------------------ACAACTTCATTGCATGAC--TTCTAATATGATTTTTAAATATACCCTCTACTGGACATTAAATTATGTGGTTACCTGAGTAAGAGATACATCCAGCAAGAGGCATTGCCTCATAGAGCTTTTCTGTCTGGTGAACTCACATACATTCTCCCC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392973 742 + 3566421 tgtggtttcccatgtttggtcctgtggcctccatgtgcctgatacagacttcaccggaacctaactctcctcctggccagggtctctgagagtggctctcttgtcagaaatacaccggatacaggtcggacaacagcctcca-ggcacctgctggtctcaacggatagt---------------ctagttgtggga---tgcacacctggacc-ctgtcgggatgaggaagtgtcctgcgaaaggca----catgctaagtatccacaagcacctgcccagaaccccagaaaggcag---ggct-tgagtttagagccactctccagacaccaacctcaagccctaattagaggaaaataaaacT-AGGTAAAAATTCAAATTTATCATACTATTTCATTGATCTGTTAGAGACATTCTATGCCTGTACACCACACATTTTCTTCGATTGTTAATATATTTTAGATAGAATTTCGTGTCT-GCTTTCACTTTGATCTGGTCTCTACCTCAACTATATAGTAAAGACTTATGGTGGGTTCTTTTCTGGTACTACTATCTACCAGTGTGGGGTCATGTCCTAGCCTATCT---------------------------TGAGGGAACTCCC------------CTGTTCATTATTGGGCAGAGTGAG---------------------------ATTTCATTGCATGAC--TTCTAATATGATTTTTAAATATACCCTTTACTGGACAATAAATTATATGGTTACCTGAGTAAGAGATATGTCCAGCAAGAGGCATTGCCTCATAGAGCTTTTCTATCTGGTGAACTCACATACATTCTCCTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894850 749 - 9267652 tgtgatttcccatgtttggtcctgtggcctccatgtgtctgatacaacctgcactggaacctaactctcctcctggccagggtctctgagagtggctctcttgtcagaaatatactggatacaggtcagacaatggcctcca-ggcacttgctagtctcaacggatatt---------------ctggctgtggga---tgcacacctggccc-ctgtcggggtgaggaagtgtcctgtgaaaggcacatgcatgctaagcatccacaaccacctgcccagaaccccagaaaggcgg---ggct-tgaaattatagccactctccagacacaaacctcaagcgctaattagaggaaaataaaacT-AGGTAAAAATTTGAATTTATCATACTATTTCATTGATCTATTAGGGACATTCCATACATGTACAGCACATATTTTCTTCGGTTGTTAATATATTTTAGATAGAATTTCATGTCT-GCTTTCACTTTGGTCTGGTCTCTACTTCGACTATATAGTAAAGACTTCTGGTGGGTTCTTTTCTGGTGCTACTATCTACGAGTGTGGGGTCATGTCCTAGTCTATCT---------------------------TGAGGGAACCCCC------------CTGTTCATTATTGGGCAGAGTGAG------------------------ACAACTTCATTGCATGAC--TTCTAATATGATTTTTAAATATACCCTTTACTGGACAATAAATTGTATGGTTACCTTAGTAAGAGATATGTCCAGCAAGAGGCATTTCCTCATAGAGCTTTTCTATCTGGTGAACTCACATACGTTCTCCTC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12757830 761 + 14340318 tgtgctttcttgtgcttcctgctttgg----gacttgtctgaccaa---tacacaagaacccaactctcctcccagtcagggtctcctagtgaggggtgtctggaaagaataccctgggcatgagtcagacaagaatgacaagggcacctgtcagcataaacaagtttcctgtgaca-ggacacctggtcgtgggggttctctgaagtagctacctgccaggatgaggaagcacccc-cggaaggtt----cactgtggacactc------------caagagccccatcaaagcaggctggctggcacttaacaaccattttcgagagagagacagcgagacctgattagagggaaataaaacTCATGAATCTTTTTAAACTGATCA-ACCGCTTTGCCAGTCCAACAGCAGCATTCTATTTCT-----CTGCACATTTTCTTCAATTGTTGATGTATTTTGGTTAAAATTCCATGCCTGGTTTTCTC-TTGGCCTGGTCTCTACCTCCAGTGCACAACACAG-CTTCCTGTGGGTTATTTTCTGGTA------------GGTTTGCGGTCATGTCCTGATCTGTCC---------------------------TCAGGGAACCCTCTGCTGGGGAACACTGTTCATTATG-GGTAGACGGAGACTGCCAAGTCTTGATTTCCCAGGACAACCTCACTGTATGAGTATTTCAATACAATTTTCAAATGTGTCCCAGATGGGAAAATAAATTATGTGGCTATCTGAGTAAGAGATACGGTCAGGAAGAAGCAGGGCCTCGTACAG-TTTTCTGTTGGATGAACTCATGTATGTTC----- i otoGar3.GL873564 I 1514 C 0 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302578 0 + 192294377 C a score=40427.000000 s hg38.chrUn_KI270746v1 9939 5 + 66486 ACCCG s panTro5.chr2A 90270421 5 + 111504155 ACCCG i panTro5.chr2A C 0 C 0 s panPan2.chr7 108523911 5 - 162613886 ACCCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 133153 5 + 150013 ACCCG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 219350 5 + 1200634 ACCCA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133472894 5 - 185818997 ACCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302578 5 + 192294377 ACCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784438 5 + 3123512 ACCCA i macNem1.NW_012011522v1 C 0 C 0 s chlSab2.chr21 5710798 5 + 127223203 ACCCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171384 5 - 1799296 ACCCA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754634 5 + 6934359 ACCCA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108116926 5 - 128169293 ACTCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734263 5 - 18371965 ACTCA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1393715 5 + 3566421 ACTCA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1895599 5 - 9267652 ACTCA i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12758591 0 + 14340318 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I a score=2447155.000000 s hg38.chrUn_KI270746v1 9944 258 + 66486 CCAGTCACCTCTAAACCATATTGTTCCAAGACAACAAACAGGACT-CGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGCTTCATGCTTAGTAGGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CCTTCTTCATATGGAATTATGGGTGATTTCCTTCAATCTGCATCGTAT-CAAGTTGAGGTT-CACGTTGATGGAAAGTAAAACATACTTTTAAAA-TATCAGTA---GTG s panTro5.chr2A 90270426 261 + 111504155 CCAGTCGCCCCTAAAACGTATTGTTCCAAGACAACAAACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTGTTTGCTCCATAAAGCTTCATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CCTTCTTTCTATGCAACTATGGGTGATTTCCCTCAATCTGCATCATAT-AAAGTTGAAGTT-CATGTTGATGGAAGGTAAAACATACGTTGAAAA-TATCAGTAATGATG i panTro5.chr2A C 0 C 0 s panPan2.chr7 108523916 254 - 162613886 CCAGTCACCTCTAAACCATATTGTTCCAAGACAATAAACAGAACT-TGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAA-------GCTTAATAGGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CCTTCTTAATATGAAATTATAGGTGATTTCCTTTGATCTGCATCATAT-CAAGTTGAGGTT-CATGTTTATGGAAAGTAAAACATACGTTTAAAA-TATCAGTAATGATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 133158 261 + 150013 CCAGTCACCTCTAAACCGTATTGTTCCAAGACAACAAACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTGTTTGCTCCATAAAGCTTCATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CCTTCTTCATATGGAATTATGGGTGATTTCCTTCTATCTGCATCATAT-CAAGTTGAGGTT-CACGTTGATGGAAAGTAAAACATACGTTTAAAA-TATCAGTAATGATG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 219355 261 + 1200634 CCAGTCACCTCTAAACTGTATTGTTCTAAGACAACAAACAGAACT-CGAGTGTGTATCTTTCACCACTGGATGTGTCTTTGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAATCTGCATCATAT-CAAGTTGAGGTT-CATGTTTATGGAAAATAAAACATACGTTTAAAA-TATCAGTAATGATG i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133472899 258 - 185818997 CCAGTCATCTCTAAACCCTGTTGTTCCAAGACAATATACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAATCTGCATCATAT-CAAGTTGAAATTGCATGTTTATGGAAAGTAAAACATAGTTTTTAAA-TATCAGTAATGATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302583 258 + 192294377 CCAGTCATCTCTAAACCCTGTTGTTCCAAGACAATATACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAATCTGCATCATAT-CAAGTTGAAATTGCATGTTTATGGAAAGTAAAACATAGTTTTTAAA-TATCAGTAATGATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784443 258 + 3123512 CCAGTCATCTCTAAACCCTGTTGTTCCAAGACAATATACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTATCTTTGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAATCTGCATCATAT-CAAGTTGAAATTGCATGTTTATGGAAAGTAAAACATAGTTTTTAAA-TATCAGTAATGATG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505123 258 + 10077455 CCAGTCATCTCTAAACCCTATTGTTCCAAGACAATATACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCGTAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAATCTGCATCATAT-CAAGTTGAAATTGCATGTTTATGGAAACTAAAACATAGTTTTTAAA-TATCAGTAATGATG i cerAty1.NW_012000909v1 I 4 C 0 s chlSab2.chr21 5710803 258 + 127223203 CCAGTCATCTCTAAACCCTATTGTTCCAAGACAACATACAGAACT-TGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAACAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAATCTGCATCATAT-CAAGTTGAAATTGCATGTTTATGGAAAGTAAAACATAGTTTTTAAA-TATCAGTAATGATG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171389 258 - 1799296 CCAGTCATCTCTAAACCCTATTGTTCCAAGACAATATACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTCTTCGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAATCTGCATCTTAT-CAAGTTGAAATTGCATGTTTATGGAAACTAAAACATAGTTTTAAAA-TATCAGTAATGATG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754639 262 + 6934359 CCAGTCACCTCTAAACCCTATTGTTCCAAGACAACAAACAGAACT-CGAGTGTGTTTCTTTCACCCCTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAATAAGGTTTCTGTTAGCATTTTCTCTATTTCTTTTCACATAAAATATCAGAGG--CCTTCTTAATATGGAATTATGGGCGATTTCCTTCAATCTGCATCATAT-CAAGTTGAAACTGCATGTTTATGGAAAGTAAAACATACTTTTTAAA-TATCAGTAATGATG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108116931 253 - 128169293 CTCGCCACCTCTAAACCCTATTGTTCCAAGACAACAAACAGAAAT--GAGTGTTTATCTTTCAC--CTGAATTTGTCTTTGCTCCATAAAGCTTAAGGCTTAATAGGTTTTCTGTTAGCATTTTC----TCTGTTTTCCCATAAAATAGCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCCTCAATCTGCATCATATGAAAGTTGAAACTGCATGCGTATGGAAAGTAAAACATACATTTTAAA-TATAAGGAATT--- i calJac3.chr8 C 0 I 4 s saiBol1.JH378145 734268 257 - 18371965 CTTGCCACCACTAAACCCTATTGTTCCAAGACAACAAACAGAAAT--GAGTGTTTATCTTTCAC--CCGGATTTGTCTTTGCTCCATAAAGCTTAAGGCTTAATAGGGTTTCTGTTAGCATTTTCTCTATCTGTTTTCCCATAAAACATCACAGG--CCTTCTTAATATGGAATTATCGGTGAGTTCCCTCAATCTGCATCATATGAAAGTTGAAATTGCATGTGTATGGAAAGTAAAACATACATTTTAAA-CATCAGGAATG--- i saiBol1.JH378145 C 0 I 4 s cebCap1.NW_016107540v1 1393720 256 + 3566421 CTTGCCACCTCTATACCCTCTTGTTCTAAGACGACAAACAGAAAT--GAGTGTTTATCTTTCAC--CTGGATTTGTCTTTGCTCCAT-AAGCTTAAAGCTAATTAGGGTTTCTGTTAGCATTTTCTCTATCTGTTTTCCCATAAAATATCACAGG--CCTTCCTAATATGGAATTATGGGTGATTTCCCTCAACCTGCATCATATGAAAGTTGAAATTGCATGTGTATGGAAAGTAAAACATACATTTTAAA-TATCAGGAATG--- i cebCap1.NW_016107540v1 C 0 I 4 s aotNan1.NW_018514471v1 1895604 257 - 9267652 CTTGCCACCACTAAACCCTATTGTTCCAAGACAACAAACAGAAAT--GAGTATTTATCTTTCAC--CTGGATTTGTCTTTGCTCCATAAGGCTTAAGGCTTAATAAGGTTTCTGTTAGCATTTTCTCTATCGGTTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCCTCAATCTGCATCATATGAAAGTTGAAATTGCATGTGTATAGAAAGTAAAACATATATTTTAAA-TATCAGGAATG--- i aotNan1.NW_018514471v1 C 0 I 41 s otoGar3.GL873564 12758591 241 + 14340318 ATAGTC-CTTCTAAATCCTACTGTTTGGGGACCACAAACAGCACTTTGAGCGCACATGTTTCACCAGTGGTTTTGACTTTGCTTCCTTAAGCTTGATGCTTAATGGGGTTTCTGTTAGTATTTTTTCTGCTTAGTTTCCCATAGAATATCAAATATTCCTTGTGATAATGGAA-TAT--------------------CACCATAT-TAAGTTTAAATTACATGCTTACAGAATCAAAAACATAATTTTAGAATTATTAGTAATG--- i otoGar3.GL873564 C 0 C 0 a score=301280.000000 s hg38.chrUn_KI270746v1 10202 33 + 66486 TTTTCCCCTTCTTTTCAGCACATGTGCTTGTGA s panTro5.chr2A 90270687 33 + 111504155 TTTTCCCCTCCTTTTTAGCACCTGTGCTTGTGA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108524170 33 - 162613886 TTTTCCCCTCCTTTTTAGCACATGTGCTTGTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 133419 33 + 150013 TTTTCCCCTCCTTTTTAGCACATGTGCTTGTGA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 219616 33 + 1200634 TTTTCCCCTCCCTTTTAGCACATGTGCTTGTGA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133473157 33 - 185818997 TTTTTCCCTCCTTTTTAGCACATGTGCTTGTGA i rheMac8.chr3 C 0 I 4 s macFas5.chr3 67302841 33 + 192294377 TTTTTCCCTCCTTTTCAGCACATGTGCTTGTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784701 33 + 3123512 TTTTTCCCTCCTTTTTAGCACATGTGCTTGTGA i macNem1.NW_012011522v1 C 0 I 4 s cerAty1.NW_012000909v1 2505381 33 + 10077455 TTTTTCCCTCCTTTTTAGCACATGTGCTTGTGA i cerAty1.NW_012000909v1 C 0 I 4 s chlSab2.chr21 5711061 33 + 127223203 TTTTTCCCTCCTTTTTATCACATGTGCTTGTGA i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012105809v1 1171647 33 - 1799296 TTTTTCCCTCCTTTTTAGCACATGTGCTTGTGA i manLeu1.NW_012105809v1 C 0 I 4 s colAng1.NW_012115910v1 1754901 33 + 6934359 TTTTTCCCTCCTTTTCAGCACATGTGCTTATGA i colAng1.NW_012115910v1 C 0 I 4 s calJac3.chr8 108117188 33 - 128169293 TTTTCCCTTTATTTTTAGCACGTGTGCTTGTGA i calJac3.chr8 I 4 C 0 s saiBol1.JH378145 734529 33 - 18371965 TTTTCCTTTTATTTTTAGCAGGTGTGCTTTTGA i saiBol1.JH378145 I 4 C 0 s cebCap1.NW_016107540v1 1393980 33 + 3566421 TTTTCCTTTTATTTTTAGCATGTGTGCTTGTGA i cebCap1.NW_016107540v1 I 4 I 4 s otoGar3.GL873564 12758832 32 + 14340318 -ATGTTCCTTATTTTTAGCATATGTGCTTGTGA i otoGar3.GL873564 C 0 C 0 e aotNan1.NW_018514471v1 1895861 41 - 9267652 I a score=-15649.000000 s hg38.chrUn_KI270746v1 10235 8 + 66486 TACAAGCA--- s panTro5.chr2A 90270720 8 + 111504155 TACAAGCA--- i panTro5.chr2A C 0 C 0 s panPan2.chr7 108524203 4 - 162613886 GA----AT--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 133452 8 + 150013 TACAAGCA--- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 219649 4 + 1200634 GA----GT--- i nomLeu3.chr4_GL397525_2_random C 0 C 0 s macFas5.chr3 67302874 4 + 192294377 ---GAGT---- i macFas5.chr3 C 0 C 0 s calJac3.chr8 108117221 4 - 128169293 ---GAGT---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734562 4 - 18371965 ---GAGT---- i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12758864 8 + 14340318 ---GAGTCACT i otoGar3.GL873564 C 0 C 0 e aotNan1.NW_018514471v1 1895861 41 - 9267652 I e cebCap1.NW_016107540v1 1394013 4 + 3566421 I e colAng1.NW_012115910v1 1754934 4 + 6934359 I e manLeu1.NW_012105809v1 1171680 4 - 1799296 I e chlSab2.chr21 5711094 4 + 127223203 I e cerAty1.NW_012000909v1 2505414 4 + 10077455 I e macNem1.NW_012011522v1 2784734 4 + 3123512 I e rheMac8.chr3 133473190 4 - 185818997 I a score=4347146.000000 s hg38.chrUn_KI270746v1 10243 461 + 66486 -------------CAT----------------TT-----------CAATACAATTCCAGTCTCATGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAT-TATCTGAGTTTTATGAGGCCTTTAGTATATGATGTGATAGAATATGAGAAGACCATACTTTTTTCTAGTTTTCCGTGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAGTA-ATTTTCCAAAATAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAATAAGTGAAACCAAAAGCTAGATTATATA-ATTTATCTAGAATAAGAAAGTAGAATTGAATCTATATTCATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGAAGATCATATGG-AATCATTGTCAGATATATTATTATTTATGTCTGTATGCACATCACCTGTGCATATTTATGTAGAAATCAATGAGAGTTGATTTTTATTTTTATTATATATA s panTro5.chr2A 90270728 469 + 111504155 -------------CATTGTGATACAAGCACAATG-----------TAATACAATTGTAGTCTCATGCTTTGATCATTCCTATGATGAAAATAACATTTTTAGATAATA-TGTCTGAGTTTTATGAGGCCTTTAGTATGTGATGTGATAGAATATCAGAAGACCATACTTTTTTCTAGTTTTCCGTGCAATTCTATCATTGGTTCATCTTTACTCCTACCAGAGTA-ATTTCCCAAAATAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAACTAAGTGACATGAAAAGCTAGATTATATA-ATTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCATTAATGAGACTAACCAGTCAATTACACAGATAGGCACTTTAGATTTTGAAGATCATATGG-ACCCATTGTCAGAAATATTATTATTTA------TATGGACATCATCTGCGCATATTTACATAGAAGTCAATGAGAACTGATTTTCA-TTTTATTATATAt- i panTro5.chr2A C 0 C 0 s panPan2.chr7 108524207 461 - 162613886 -------------CAT----------------TG-----------TAATACAATTCTAGTCTCATGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCCGAGTTTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGACCATATTTTTCTCTAGTTTTCCGTGCAATTCTATCATTGTTTCTTCTTTACTCCTACCGGAGTA-GTTTTCCAAAATAGATATCTTGTCATTCTTCCTGTTGTTACCAGTAAATAAGTGAAATGAAAAGCTAGATTATATA-TTTTTTCTAGAAGAAGAAAGTAGAATTGAATCTCTATTCACTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGAAGATCATATGG-ACCCATTGTCAGATATATTATTATTTGTATCTATATAGACATAACCTATGCATATTTATGTAGAAATCAATGAGAGCAGACTTTTATTTTTATTATATATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 133460 459 + 150013 -------------CAT----------------TC-----------TAATACAATTCCAGTCTCATGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAGTTTTATGAGGCCTTTAGTATATGATGTGATAGAATATCAGAAGACCATACTTTTTTCTAGTTTTCCGTGCAATTCTATCA--GTTTCATCTTTACTCCTACCAGAGTA-ATTTTCCAAAATAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAATAAGTGAAACCAAAAGCTAGATTATATA-ATTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCATTAATGAGACTAACCAGTCAATTACACAGAAAGGCATTTTACATTTTGAAGATCATATGG-AATCATTGTCAGATATATTATTATTTATGTCTGTATGGACATCACCTGTGCATATTTATGTAGAAATCAATGAGAGTTGATTTTTATTTTTATTATATATA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 219653 460 + 1200634 -------------CAT----------------TG-----------TAATACAATTCTAGTCTCATGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAGTTTTATGAGGCATTTAGTATATGATGTGATAGAATATCAGAATACCATACTTTTTTCTAGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAGTA-ATTTTCCAAAATGGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAATAAGTGAAATGAAAAGCTAGATTATATA-ATTTATCTAGAACAAGAAAGTAGAATCGAATCTACATTCATTAATGAGACTAACCAGTCAATTACACATATAGGCATTTTACA-TTTGAAGATCATATGG-ACCCGTTGTCAGATATATTATTGTTTATGTCTATATGGATATCGCCTGTGCATATTTATGTAGAAATCAATGAGAGCTGAtttttatttttattatatata i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133473194 457 - 185818997 -------------CAT----------------TG-----------TAACACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTTTCTC-AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAGTA-ATTTTCCAAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAATAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGCAGATCATATGG-ACCCGTTGCCAGATACATTACTATTTATACCTACATTGACCTCACCTGTGCATATTTGTGCAAAAATCAATGAGAGTTGATTTTTATTTTTATTGTATGTA i rheMac8.chr3 I 4 C 0 s macFas5.chr3 67302878 457 + 192294377 -------------CAT----------------TG-----------TAACACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTTTCTC-AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAGTA-ATTTTCCAAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAATAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGCAGATCATATGG-ACCCGTTGCCAGATACATTACTATTTATACCTACATTGACCTCACCTGTGCATATTTATGCAAAAATCAATGAGAGTTGATTTTTATTTTTATTGTATGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784738 457 + 3123512 -------------CAT----------------TG-----------TAACACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTTTCTC-AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAGTA-ATTTTCCAAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAATAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGCAGATCATATGG-ACCCGTTGCCAGATACATTACTATTAATACCTACATTGACCTCACCTGTGCATATTTATGCAAAAATCAATGAGAGTTGATTTTTATTTTTATTGTATGTA i macNem1.NW_012011522v1 I 4 C 0 s cerAty1.NW_012000909v1 2505418 457 + 10077455 -------------CAT----------------TG-----------TAATACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTAAGATAAAA-TATCTGAGCTTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTTTCTC-AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCTTACCAGAGTA-ATTTTCCAAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAATAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGAAGATCATATGG-ATCCATTGCCAGATACATTACTATTTATACCTACATTGACCTCACCGGTGCATATTTATGCAAAAATCAATGAGAGCTGATTTTTATTTTTATTATATGTA i cerAty1.NW_012000909v1 I 4 C 0 s chlSab2.chr21 5711098 451 + 127223203 -------------CGT----------------TG-----------TAATACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATC---------TGAAGCCTTTAGGAGATGATGTGATAGAATATCAGAAGACCATATTTTTCTC-AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAGTA-ATTTTCCAAAATAGGTATCTTGTCATTCTTCCTGTTGTTATCAGTGAAAAAGTGAAATGAAAATCTAGATTATATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGAAGATCATATGG-ATCCATTGCCAGATACATTACTATTTACACCTACATTGACCTAACCGGTGAATATTTATGCAAAAGTCAGTGAGAGCTGATTTTTATTTTTATTGTATGTA i chlSab2.chr21 I 4 C 0 s manLeu1.NW_012105809v1 1171684 457 - 1799296 -------------CAT----------------TG-----------TAATACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTTTCTC-AGTTTTCCATGCAACTCTATCATTGTTTCATCTTTACTCCTACCAGAGTA-ATTTTCCAAAATAGGTATCTTGTCGTTCT---TGTTGTTATCAGTGAATAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGGATTGAATCTATATTCATTAATGAAACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGAAGATCATATGG-ATCCATTGCCAGATACATTACTATTCATACCTACATTGACCTCACCGGTGCATATTTATGCAAAAATCAATGAGAGATGAtttttatttttattatatgta i manLeu1.NW_012105809v1 I 4 C 0 s colAng1.NW_012115910v1 1754938 460 + 6934359 -------------CAT----------------TG-----------TAATACAATTCTAGTCTCACGCTTTGATCATCCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCATTTAGGATGTGATGTGATAGAATATCAGAAGACCATATTTTTCTC-AGTTTTCCATGCAATTCTATCATTGTTTCATCTATACTCCTACCAGAGTA-ATTTTCCAAAATAGATATCTTGTCATTCTTCCTGTTATTATCAGTGAATAAGTGAAATGGAAAGCTAGATTATATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCTTTAATGAGACTAACTAGTCAATTACACAGATAGACATTTTACATTTTGAAGATCATATGG-ACCCATTGCCAGATACATTACTATTTATATCTACATTGATCTCACCTGTGCATATTTATGCAAAAATCAATGAGAGCTGATTTTTATTTTTATTATATGTA i colAng1.NW_012115910v1 I 4 C 0 s calJac3.chr8 108117225 450 - 128169293 -------------CAT----------------TG-----------TAATACAATTTTAGTCTCATGCTTTGATCATTCCTAAGATGAAA---ATATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCAATAGGATATCTTGTGATAGGCTATCATAAGACCATATTTTTCTCTAGTTTTGTATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAGTA-AATTTCCAAAATAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAAGAAGTGATATGAAAAGCTAGATTATATATTTTTATGCAGAGCAAGAAAGTAGAATTGAATCTATATTCTTTAATAAGACTAATCAGTCAATTACAC----AGTCATTTTACATTTTGAAGATTATATCG-GCCCATTGTCAGA-----TATTATGTATTTCTATATGGACATGGCCTGTGCATATTTATGTAGAAATTAATGAGAGCTGATTTTTATTTCAATTATGTGTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734566 456 - 18371965 -------------CAT----------------TG-----------TAATACAATTTTA-TCTCTTGCTTTGATCATTCCTAAGATGAAAATTATATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCAATAGGATGTCTTGTGATAGAGTATCATAAGACCATATTTTTCTCTAGTTTTGCATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAGTA-AATTTCCAAAATAGATATCTTGTTATTCTTTCTGTTGTTATCAGTAAATAAGTGATATGAAAAGCTAGATTATATATTTTTATCTAGAGCAAGAAAATAGAATCGAATCTATATTCTTGAATAAGACTAACCAGTCAATTACACATATAGTTATTTTACATTTTGAAGATTATATCG-ACCCATTGTCAAA-----TATTATGTATATCTATATGGACATGGCCTGTGCATATTTATGTAGAAATCAATGACAGCTGATTTTTATTTTAATTTTATGCA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394017 454 + 3566421 -------------CAT----------------TG-----------TAATACAATTTTAGTCTCATGCTTTGATCATTCCTGAGATGAAA---ATATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCAATAGGATATCTTGTGATAGAATATCATAAGACCATATTTTTCTCTAGTTTTGCATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAGTA-AATTTCCAAAATAGATATCTTGTCATTCTTCCTGTTGTTATCCGTAAATAAGTGATATGAAAAGCTAGATTATATATTTTTATCTAGAGCAAGAAAGAAGAATTGAATCTATGTCCTTGAATAAGACTAACCAGTCAGTTACACATATAGTCATTTTACATTTTGAAGATTATGTCG-ACCCATTGTCAGA-----TATTACGTATATCTATATGGACTTGGCCTGTGCATATTTATGTAGAAATCAATGAGAGCTGATTTTTATTTTAATTATATGTA i cebCap1.NW_016107540v1 I 4 C 0 s aotNan1.NW_018514471v1 1895902 451 - 9267652 -------------CAT----------------TG-----------TAATACAATTTTAGTCTCATGCTTTGATCATTCCTAAGATGAAA---ATATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCAATAGGATATCTTGTGATAGAATATCATAAGACCATATTTTTCTCTAGTTTTGCATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAGTA-AATTTCCAAAATAGATATCTTGTCATTCTTCC---TGTTATCAGTAAATAAGTGATATGAAAAGCTAGATGATATATTTTTATCTAGAGCAAGAAAGTAGAATTGAATCTATATTCTTTAACAAGACTAACCAGTCAATTACACATATAGTCATTTTACATTTTGAAAATTATATCG-ACCCATTGTCAGA-----TATTATGTGTTTCTATATAGACATGGCCTGTGCCTATTTATGTAGAAATCAATGAGAGCTGATTTTTATTTTAATTATATGTA i aotNan1.NW_018514471v1 I 41 C 0 s otoGar3.GL873564 12758872 406 + 14340318 GTTTTTATTTGGTCAC----------------TGGGAAACAGAGATAATGTAATTCTTGTCTCATATTTTGATCTTTCCCAAGATGAAAAGAATATTTTTAGTTAAAAGTACCTAAAATTAATGAAACTGTTAGGATATGATGAGATAGAGTATTATAAGACCATAATTTTCTC-CATTTTACACATAATGCTATCATTGTTCCATTCTT-------TCAGATTATTTTTTCTAAAATGGATATCTTATCATTCTTTCTGTTATTATCAGTAAATAAGTGA-ATGAAAAACTAGATTATATGTTTTCATATGAGACAAGAAAGTAGAATCAATTGTACATCCTTTCATAA----AACAAGTCAGTTACAC----AGCCATTATACATTTTAAAGATAATATGGCATCCACTGTCAGAAAAATTATTATTG----CTGTATAGA-------------------------------------------------------------- i otoGar3.GL873564 C 0 C 0 a score=997594.000000 s hg38.chrUn_KI270746v1 10704 123 + 66486 ttttttgagatagggtcttgctttgttgcccaggctggagtgcagtggtgcaatcactgctcactgcagcctcaacctcccaagctcaagcaatccttcctccttgacctcccaaataactag s panTro5.chr2A 90271197 123 + 111504155 ttttttgagatagggtcttgctttgttgcccaggctggaatgcagtggtgcaatcactgcgcactgcagcctcagcctcccaagctcaagcgatccttccaccttggcctccaaaatagctag i panTro5.chr2A C 0 C 0 s panPan2.chr7 108524668 123 - 162613886 ttttttgagatagggtcttgctttgtggcccaggctggagtgcagtggtgcaatcactgctcgctgcaggctcaacctcccaagctcaagcaatccttccaccttggcctctcaaatagctag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 133919 123 + 150013 ttttttgagatagggtcttgctttgttgcccaggctggagtgcagtggtgcaatcactgctcactgcagcctcaacctcccaagctcaagcaatccttccaccttgacctcccaaatagctgg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 220113 123 + 1200634 ttttttgagatagggtcttgctttgttgcccaggctggggtgcagtggtgcaatcactgctcactgcagcctcaacctcccaagctcaagcaatccttccaccttggcctctcaaatagctag i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133473651 123 - 185818997 ttttttgagttagagtcttgctttggtgcccaggctggagtacagtggtgcaatcactgctcactgcagcctcaaccccccaagctcaagcaatccttccacctcagcctcccaaatagctag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303335 123 + 192294377 ttttttgagttagagtcttgctttggtgcccaggctggagtacagtggtgcaatcactgctcactgcagcctcaaccccccaagctcaagcaatccttccacctcggcctcccaaatagctag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785195 123 + 3123512 ttttttgagttagagtcttgctttggtgcccaggctggagtacagtggtgcaatcactgctcactgcagcctcaaccccccaagctcaagcaatccttccacctcggcctcccaaatagctag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505875 117 + 10077455 ttttttgagttagagtcttgctttggtgcccaggctggaatacagtggtgcaatcactcc------caagctcaacctcccaagctcaagcaatccttccaccttggcctcccaaatatctag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711549 123 + 127223203 ttttttgagttaggttcttgctttggtgcccaggctggaatacagtggtgcaatcactgctcactgcagcctcaacctcccaagctcaagcaatccttccaccttagtcttccaaatagctag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172141 117 - 1799296 ttttttgagttagggtcttgctttgatgcccaggctggaatacagtggtgcaatcactcc------caagctcaacctcccaagctcaagcaacccttccaccttggcctcccaaatacctag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755398 123 + 6934359 ttttttgagttagggtcttgctttggtgcccaggttggaatatcgtggtacgatcactgctcactgcagccacaacctccaaagctcaagcaatccttccaccttggcctcccaaatagctag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117675 98 - 128169293 TTTCTTGGGATAGGGTCTTGCTTTATTGC-------------------------cactgttcactgcgacctcgacctttcaagctgaagcaatccttccacctcagcctcccaagtagctag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735022 98 - 18371965 TTTTGGGAGATAGGGTCTTGCTTTATTGC-------------------------cactgctcactgcagcctcaaccttccaagctgaagcaatccttccacctcagcctcccaaatagctag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394471 98 + 3566421 TTTTTTGGGATAGGGTCTTGCTTTATTGC-------------------------CACTgctcactgcagcctcaactttccaagctgaagcaatccttccacctcaccctcccaaatagctag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896353 98 - 9267652 TTTTTTGGGATAAGGTCTTGCTTTATTGC-------------------------CACTgctcgctgcagcctcaaccttccaagctgaagcaatccttccacctcagcctcccaaatagctag i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12759278 0 + 14340318 C a score=23480.000000 s hg38.chrUn_KI270746v1 10827 3 + 66486 gac s panTro5.chr2A 90271320 3 + 111504155 gac i panTro5.chr2A C 0 C 0 s panPan2.chr7 108524791 3 - 162613886 gac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 134042 3 + 150013 gac i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 220236 3 + 1200634 gac i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133473774 3 - 185818997 aac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303458 3 + 192294377 aac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785318 3 + 3123512 aac i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505992 3 + 10077455 gac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711672 3 + 127223203 gac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172258 3 - 1799296 gac i manLeu1.NW_012105809v1 C 0 I 6435 s colAng1.NW_012115910v1 1755521 3 + 6934359 aac i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117773 3 - 128169293 tac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735120 3 - 18371965 tac i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394569 3 + 3566421 tac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896451 3 - 9267652 tac i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12759278 3 + 14340318 GAC i otoGar3.GL873564 C 0 C 0 a score=193496.000000 s hg38.chrUn_KI270746v1 10830 26 + 66486 aacaggtgcacatcaccaggcccacc s panTro5.chr2A 90271323 25 + 111504155 aacaggtgcacatcaccatgcccac- i panTro5.chr2A C 0 C 0 s panPan2.chr7 108524794 26 - 162613886 aacaggtgcacaccatcatgcctacc i panPan2.chr7 C 0 I 1 s gorGor5.CYUI01000341v1 134045 26 + 150013 aacaggtgcacatcaccatgcccatc i gorGor5.CYUI01000341v1 C 0 I 3 s nomLeu3.chr4_GL397525_2_random 220239 26 + 1200634 aacaggtgcacatcaccatgcccatc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133473777 26 - 185818997 aacaggtgcacaccatcatgcccagc i rheMac8.chr3 C 0 I 3 s macFas5.chr3 67303461 26 + 192294377 aacaggtgcacaccatcatgcccagc i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 2785321 26 + 3123512 aacaggtgcacaccatcatgcccagc i macNem1.NW_012011522v1 C 0 I 1 s cerAty1.NW_012000909v1 2505995 26 + 10077455 gacaggtgcacaccaccatgcccagc i cerAty1.NW_012000909v1 C 0 I 6 s chlSab2.chr21 5711675 26 + 127223203 cataggtgcacacaaccatgcctagc i chlSab2.chr21 C 0 I 11 s colAng1.NW_012115910v1 1755524 26 + 6934359 aacaggtgcacgccaccatgcccagc i colAng1.NW_012115910v1 C 0 I 6 s calJac3.chr8 108117776 26 - 128169293 aacaggtgtgcaccaccatgcccagc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735123 26 - 18371965 tacaggtgtgcaccaccatgcccagc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394572 26 + 3566421 aacaggtgtgcagcaccctgcccagc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896454 26 - 9267652 aacaggtgtgcaccaccatgcccagt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12759281 21 + 14340318 ATCATCTGTACATAGCAATGC----- i otoGar3.GL873564 C 0 C 0 e manLeu1.NW_012105809v1 1172261 6435 - 1799296 I a score=256382.000000 s hg38.chrUn_KI270746v1 10856 30 + 66486 tttt-----tttttttaacttttgatagagactag s panTro5.chr2A 90271348 29 + 111504155 -ttt-----tttttttaacttttgatagagactgg i panTro5.chr2A C 0 C 0 s panPan2.chr7 108524821 30 - 162613886 tttt-----tttttttaacttttggtagagactgg i panPan2.chr7 I 1 C 0 s gorGor5.CYUI01000341v1 134074 30 + 150013 tttt-----tttttttaacttttgatagagactag i gorGor5.CYUI01000341v1 I 3 C 0 s nomLeu3.chr4_GL397525_2_random 220265 29 + 1200634 -ttt-----tttttttaacttttgatagagactgg i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133473806 30 - 185818997 tttt-----tttttttaacttttggtagagactgg i rheMac8.chr3 I 3 C 0 s macFas5.chr3 67303489 30 + 192294377 tttt-----tttttttaacttttggtagagactgg i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 2785348 30 + 3123512 tttt-----tttttttaacttttggtagagactgg i macNem1.NW_012011522v1 I 1 C 0 s cerAty1.NW_012000909v1 2506027 30 + 10077455 tttt-----tttttttaacttttggtagagactgg i cerAty1.NW_012000909v1 I 6 C 0 s chlSab2.chr21 5711712 30 + 127223203 tttt-----tttttttaacttttggtagagactgg i chlSab2.chr21 I 11 C 0 s manLeu1.NW_012105809v1 1178696 30 - 1799296 tttt-----tttttttaacttttggtagagactgg i manLeu1.NW_012105809v1 I 6435 C 0 s colAng1.NW_012115910v1 1755556 30 + 6934359 tttt-----tttttttaacttttggtagagactag i colAng1.NW_012115910v1 I 6 C 0 s calJac3.chr8 108117802 28 - 128169293 --ta-----tttttctaacttctggtacagactgg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735149 28 - 18371965 --ta-----tttttttaacttttggtacaaactgg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394598 33 + 3566421 --tattttttttttttaacttttggtacagactgg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896480 28 - 9267652 --ta-----tttttttaacttttggtacagactgg i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12759302 9 + 14340318 --------------------------AGAAATCAA i otoGar3.GL873564 C 0 C 0 a score=1042873.000000 s hg38.chrUn_KI270746v1 10886 107 + 66486 atcttgctatgttgcccaggttgttcttgaactcctgggctcaaagaatcctctcatttcagcctcttcaactgctggtattacaagcatgagccaccATATGGGCT s panTro5.chr2A 90271377 107 + 111504155 gtcttcctaggttgcctaggttgctttcgaactcctgggctccaggaatcctctcatttcagcctcttcaactgctagtattacaagcatgaaccaccacATGGGCT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108524851 107 - 162613886 gtcttgctatgttgctcaggttgttcttgaactcctgggctcaaagaatcctctcatttcagcctcttaaactgctggtattacaggcatgagccaccATATGGGCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 134104 107 + 150013 atcttgctaagttgcccaggttgctcttgaactcctgggctcaaagaatcctctcatttcagcctcttcaactgctggtattacaagcatgagccaccATATGGGCT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 220294 107 + 1200634 gtcttgctaacttgcccaggttgctcttgaactcctgggctcaaagaatcctctcatttcagcctcttaaactgctgttatttcaataatgagccaccATATTGGCT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133473836 107 - 185818997 atcttgctatactgcccaggttgcttttgaagtcctgggctcaaagaatcctctcatttcagtctcttaaaatgctggtatgacaggcatgagccaccATATGGGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303519 107 + 192294377 atcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatttcagtctcttaaaatgctggtattacaggcatgagccaccATATGGGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785378 107 + 3123512 atcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatttcagtctcttaaaatgctggtattacaggcatgagtcaccATATGGGCT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506057 107 + 10077455 atcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatttcagtctcttaaaatgctggtattacaggcatgagccaccATATGGGCT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711742 107 + 127223203 atcttgctatactgcccaggttgctcttgaagccctgggctcaaagaatcctctcatttcaatctcttaaaatgctggtattagaggcatgagccaccATATGGGCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1178726 107 - 1799296 atcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatttcagtctcttaaagtgctggtattacaggcatgagccaccATATGGGCT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755586 107 + 6934359 atcttgctatattgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatttcaatctcttaaaatgctggtattacaggcatgagccaccATATGGGCT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117830 107 - 128169293 gtcttgctatgttgtccaggttgctcttgaactcctgggctcaaagaatcctcttatttcagcctcttaaaatactggtattacagacataagccaccATATGGGCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735177 107 - 18371965 gtcttgctatgttgtccaggtggctcttgaactcctgggctcaatgaatcctctcatttcaccctcttaaaatgctggtattacagacatgagccaccATATGGGCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394631 107 + 3566421 gtcttgctatgttgtccaggttgctcttgaactcctgggctcaaagaatcctctcatttcagcctcttaaaatgctgatattacagacatgagtcaccATATGGGCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896508 107 - 9267652 gtcttgctatgttgtctaggttgctcttgaactcctgggctcaaagaatcctctcatttcagcctcttaaaatgctgatattacaaacatgagccaTTATATGGGCT i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12759311 0 + 14340318 C a score=12428968.000000 s hg38.chrUn_KI270746v1 10993 1219 + 66486 GGAAGCTGATTTTTAAAATACTGAGACCATATAGATGACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTGT--GAGGGTATCAATGTTGTTGTGGCTATT----GGGGAGGAAAACATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTTAAACTT----------TGGCTTTAATTTAACAAATGTTCTCTGGGGTGACAGTATGTATGTAACCATGC---------------------TATGCCCATTCACAGATGCAGTAGAGGGAAGAATTTCTCAAAGACAACTG---TTCTAAGATTGAAATTAAACAGTACTGGGCTTAAAAAGAGAAAGTCTAGGAATTACCAAACATTTTAGATATCAGATTAAAGAGATTGCGAGGTA--TGCGATGATAATCAGCAATGGTTGCTCACACAATACATCAAATCAGTATTTGAATTAGCTTTTCAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGATAAATCTTATTAGGCTGAGATGTGTTTTTGCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCAGCAAGCCAAAAGCTG--AAGTTCATCAATCAATG--TGTCTAAGTGTCCACTAGTTATATACCATTTTGTAGTTTCAGCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGATCTTG-TTTTTTCCACTATCACTTCTTTATTGACCATATAAAGA--ATATAAATAAGTTCTTATTTTG---TTGTTTATTTTAGTCTAATTTCATCAAAGTATCATAAT-TTTTTATTTCATTTTAATTTCAAAGATTAAATGAAACCTACATAGAAATGAGTGTAAGATTTGCATTTGCATTA-TTTTGGCATCAATTTGCTATCCTTCCTCATACACAT----AGAGAACATTTCCATGTACATGATTTCAAACATCCAAG-----------------TGCAGTATTAAAAGCAGTTGTAAATTATGGTTCTGATTTTCATGATACAATTACtatataaacttcctcttgctgctgtaaccaattaacacaaacttcatatcttacaataaagtgatt-gt------taatcctacagttctggagttcagaagacttaaataagactcacagggctaacatcaagttttgggcagggctgcagtctttctgag-ggctacgtggcagaatctatgtacttga--tatttttcagcatccagaggccacctttattccttggaacatgacctcattcttatatc s panTro5.chr2A 90271484 1222 + 111504155 GGAAGCTGATTTTTAAAATACTGAGATCATATAGATGACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGGGT--GAGGGTATCAATATTGTTGTGGCTATT----GGGGAGGAAAACATTAGTAAAACCAGTAAGTTAAAGCTCTTGCTTTAAACTT----------TGGCTTTAATTTAACAAATGTTCTATGGAGTGACAGTATGTATGTAACCATGC---------------------TATGCCCATTCACAGATGCAGTAGAGGGAAGAATTTCTCAAAGACAACTG---TTCTAAGACTCAAATTAAACCATACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATATCAGATAAAAGAGAATGCCAAGTA--TGCGATGATAATCAGCAATGGTTGTTCACACAATACATCAAAGCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTAGACTGTTTAGTAGATAAATGTTATTAGGCTGAGATGTGTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAGCTG--AAGTTCATCGATCAGTG--TGTCTAAGTGTTCACTGGTTATATACCATTTTGTAGTTTCAGCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGATCTTGTTTTTTTCCACTATCACTTCTTTATTGACCATATAAAGA--ATATAAGTGAGTTCTTATTTTGTTATTGTTAATTTTAGTCTAATTTCATCAAAATATCACAAT-CTTTAATTTCATTTTAATTTCAAAGATTAAATGAAACCTACATAGAAATGAGTGTAAGATTTGCATTTGCATTA-TTTTGGCATCAATTTGCTATCCTCCCTCATGCACAT----GGAGATCATTTCCATGTATGTGATTTCAAACATCCAAG-----------------TGCAGTATTAAAAGCAGTTGTAAATTATGGTTCTCATTTTCATGATACAATTACAgtataaacttcctcttgctgctgtaaccaattaccacaaacttcatatcttacaataaagtgacc-gt------taatcctacagttctgtagttcagaagccttaaatgaaactcacagggctaacatcaagttttgggcaggactgcagtctttctgag-ggctatgtggcagaatctat-tacttga--tttttttcagcatccagaggccacctttattccttggaacatgacctcattcttatatc i panTro5.chr2A C 0 C 0 s panPan2.chr7 108524958 1236 - 162613886 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGTACCTGAAAAATAGACAACACCAAGCTTTACGTTAAAAGGTGT--GGGGATATCAATATTGTTGTGGCTATT----GGGGAGGAAAAAATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTTAAACTT----------TGGCTTTAATTTAACAAATGTTCTCTGGGGTGACAGTATATATGCATCCATGT---------------------TATGCCCATTCATAGATGCACTAAAGTGAAGAATTTCTCAAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTAACAAATATTTTAGATATCAAATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACAATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGATTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAGCTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTATATACCATTTTGTAGTTTAAGCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGTGGTTGTTTTTTTCCACTATCACTTCTTTATTGACCATATAAAGA--ATATAAGTAAGCTCTTATTTTGTTGTTGTTCATTTTAGTCTAATTTCATCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAATATT-----AAACCTACATATAAATGAGTGTAAGATTTGCATTTGCATTA-TTTTGGCAACAATTTGCTGTCCTCTTTCATACACAC----AGAGATCATATCCATGTACAAGATTTCAAACATCCAAGCAAGAAGACGGGAAGGTTATAGTATTAAAAGCAGTTGTAAATTATGGTTCTCATTTTCATGATACAATTACtatataaacttcctcttgctgctgtaaccaattaccacaaacttcatatcttacaataaagtgacc-gt------taatcctacagttctggagttcagaagccttaaatcagactcacagggctaacatcaagttgtgggcagggctgcagtctttctgag-ggctatgtggcggaatctatgtacttga--tttttttcagaatccagaagccacctttattccttggaacatggcctcattcttacatc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 134211 1222 + 150013 GGAAGCTGATTTTTAAAATACTGAGACCATATAGATGACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTGT--GAGGGTATCAATGTTGTTGTGGCTATT----GGGGAGGAAAACATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTTAAACTT----------TGGCTTTAATTTAACAAATGTTCTCTGGGGTGACAGTATGTATGTAACCATGC---------------------TATGCCCATTCACAGATGCAGTAGAGGGAAGAATTTCTCAAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCTAGGAATTACCAAATATTTTAGATATCAGATTAAAGAGATTGCGAGGTA--TGCGATGATAATCAGCAATGGTTGTTCACATAATACATCAAATCAGTATTTGAATTAGATTTTCAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGATAAATCTTATTAGGCTGAGATGTGTTTTTGCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCAGCAAGCCAAAAGCTG--AAGTTCATCAATCGATG--TGTCTACGTGTCCACTAGTTATATACCATTTTGTAGTTTAAGCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGATCTTG-TTTTTTTCACTATCACTTCTTTATTGACCATATAAAGA--ATATAAATAAGTTCTTATTTTGTTATTGTTCATTTTAGTCTAATTTCATCAAAATATCATAAT-TTTTTATTTCATTTTAATTTTAAAGATTAAATGAAACCTGCATAGAAATGAGTGTAAGATTTGCATTTGCATTA-TTTTGGCATCAATTTGCTATCCTCCCTCATACACAT----AGAGATCATTTCCATGTACGTGATTTCAAACATCCAAG-----------------TGCAGTATTAAAAGCAGTTGTAAATTATGGTTCTGATTTTCATGATACAATTACtatataaacttcctcttgctgctgtaaccaattaacacaaacttcatatcttacaataaagtgatt-gt------taatcctacagttctggagttcagaagacttaaatgagactcacagggctaacatcaagttttgggcagggctgcagtctttctgag-ggatacgtggcagaatctatgtacttga--tttttttcagcatccagaggccacctttattccttggaacatgacctcattcttatatc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 220401 1224 + 1200634 GGAAGATGATTTTTAAAATACTGAGATCATATAGATGACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTGT--GAGGGTATCAATATTGTTATGGCTATT----GGGGAGGAAATAATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTTAAACTT----------TGGCTTTAATTTAACAAATGTTCTCCGGGGCGACAGTATTTATGTAACGATGC---------------------TATGCCCATTCACAGATGCAGTAGAGGGAAGAATTTCTCAAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTGCCAAATATTTTAGATATCAGATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACAATACATCAAATCTGTATTTGAATTAGCTGTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGATTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATCACAAATTTGCAAACCTCAGGTGCTCTCATTTTATGCTATCATCAAGCCGAAACCTG--AAGTTCATCAATCAATG--TGTCTAAGTGTTCACTAGTTATATACCATTTTGTAGTTTAAGCTATCTTTCCAATTTCCTAAATCATCACCTTCATTTGCTCTT--TTTTTTCCACTATTACTTCTTTATTGACCATATAAAGA--ATATAAGTAAGTTCTTATTTTGTTATTGTTCATTTTAGTCTAATTTCATCAAAATATAATAATCCTTTAATTTCATTTTAATTTCAAAGATTAAATTAAACCTACATATAAATGAGTGTAAGATTTGCATTTGCATTA-TTTTGGAATCAATTTGCTATCCTCCCTCATACACGT----AGAGATCATTTCCATGTACGTGATTTCAAACATCCAAG-----------------TGCAGTATTAAAAGCAGTTGTAAATTATGGTTCTCATTTTCATGATACAATTACtatataaacttcctcttgctgctgtaaccaattaccacaaacttcatatcttacaataaagtaact-gt------taatcctacagttctggagttcagaagccttaaatgagactcacagggctaacatcaagttttgggcagggctacagtctttctgaa-ggctatgtgatagaatctatgtacttgatttttttttcagcatccagaggccacctttattccttggaacatgatctcattcttatatc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133473943 1228 - 185818997 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAATATTGTTATGGCTATT----GTGGAGGAAAA-ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGAAACTT----------TGGTTTTAATTTAACAAATGTTTTCTGGGGTGACAGTATATATGTACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAGAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGATTAATCTTATTATGCTGAGATGTCTTTCCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCCGCTCTCATTTTATGCTCTCACCAAGCCAAAAGCTG--AAGTTCATCATTCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAAGCTATCTTTTCAACTTCCTAAATCATCATCTTCATTTGTTCTTGCTTTTTTCCACTATCACTTCCTTATTAACCATATAAAGA--ATG-----------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGATTAAATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCATACACAT----AGAGATCATATCCATGTACCTCATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------taatcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcagtctttctgag-ggctatgtggcagaatctatgtacttga---ttttttcagcatccagaggccaccttcattccttggaacatggcctcattcttacatc i rheMac8.chr3 C 0 I 10 s macFas5.chr3 67303626 1228 + 192294377 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAATATTGTTATGGCTATT----GTGGAGGAAAA-ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGAAACTT----------TGGTTTTAATTTAACAAATGTTTTCTGGGGTGACAGTATATATGTACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAATAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGATTAATCTTATTATGCTGAGATGTCTTTCCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCGAAAGCTG--AAGTTCATCATTCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAAGCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTGCTTTTTTCCACTATCACTTCCTTATTAACCATATAAAGA--ATG-----------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGATTAAATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCATACACAT----AGAGATCATATCCATGTACCTCATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------taatcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcagtctttctgag-ggctatgtggcagaatctatgtacttga---ttttttcagcatccagaggccaccttcattccttggaacatggcctcattctttcatc i macFas5.chr3 C 0 I 12 s macNem1.NW_012011522v1 2785485 1228 + 3123512 GGAAGCTGATTTTTAAAATATTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAATATTGTTATGGCTATT----GTGGAGGAAAA-ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGAAACTT----------TGGTTTTAATTTAACAAATGTTTTCTGGGGTGACAGTATATATGTACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAGAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGATTAATCTTATTATGCTGAGATGTCTTTCCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAGCTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTACATACAGTTTTGTAGTTTAAGCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTGCTTTTTTTCACTATCACTTCCTTATTAACCATATAAAGA--ATG-----------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGATTAAATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTGCTGCCCTCCGTCATACACAT----AGAGATCATATCCATGTACCTCATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------taatcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcagtctttctgag-ggctatgtggcagaatctatgtacttga---ttttttcagcatccagaggccaccttcattccttggaacatggcctcattcttacatc i macNem1.NW_012011522v1 C 0 I 9 s cerAty1.NW_012000909v1 2506164 1226 + 10077455 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAATATTGT--TGGCTATT----GAGGAGGAAAA-ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGAaactt----------tggctttaatttaacaaatgttttctggggtgacagtaTATATGTACCCATGT---------------------TATTCCTATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAATCGTACGGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGATTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAGCTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAAGCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTGCTTGTTTCCACTATCACTTCCTTATTAACCATATAAAGA--ATG-----------TTATTTT-TTATTGTTCATTTTACTCTACTTTCATCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGATTAAATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCATACACAT----AGAGATCATATCCATGTACCTCATTTCAAATATCCAAGCAACAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------taatcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcagtctttctgag-gactatgtggcagaatctatgtacttga---ttttttcagcatccagaggccaccttcattccttggaacatggcctcattcttacatc i cerAty1.NW_012000909v1 C 0 I 9 s chlSab2.chr21 5711849 1228 + 127223203 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACTTGAAAAATAGACCACATGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAATATTGTTATGGCTATT----GGGGAGGAAAA-ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGAaactt----------tggctttaatttaacaaatgttttctggggtgacagtaTATATGTACCCATAT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCATACTGGGTTTGAAAAGAGAAAGTCTAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAATGCCAAGTA--TGCGATGATAATTAGCAATGGTTGTTAACACGATACATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGATTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAGCTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAAGCTATCTCTTCAACTTCCTAAATCATCACCTTCATTTATTCTTGCTTTTTTCCACTATCACTTCCTTATTGACCATATAAAGA--ATG-----------TTATTTT-TTATTGTTCATTTTTCTCTAATTTCATCAAAATTTAAAAATCCTTTAATTTTATTTTAATTTCAAAGATTAAATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTAGTTTTGGCGTCAATTTGCTGTCCTCCCTCATACACAT----AGAGATCATATCCATGTACCTCATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGCTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------taatcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcaatctttctgag-ggctatgtggcagaatctatgtacttga---ttttttcagcatccagaggccaccttcattccttggaacatggcctcattcttacatc i chlSab2.chr21 C 0 I 52 s manLeu1.NW_012105809v1 1178833 1226 - 1799296 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACTTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAATATTGT--TGGCTATT----GAGGAGGAAAA-ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGAaactt----------tggctttaatttaacaaatgttttctggggtgacagtaTATATGTACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGATTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAGCTG--AAGTTCATCAATCAATG--TCTCTTAGTGCTCACTAGTTATATACAGTTTTGTAGTTTAAGCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTGCTTTTTTCCACTATCACTTCCTTATTAACCATATAAAGA--ATG-----------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAATTTAATAATCCTTTAATTTCATCTTAATTTCAAAGATTAAATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCATGCACAT----AGAGATCATATCCATGTACCTCATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------taatcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcagtctttctgag-ggctatgtggcagaatctatgtacttga---ttttttcagcatccagaggccaccttcattccttggaacatggcctcattcttacgtc i manLeu1.NW_012105809v1 C 0 I 9 s colAng1.NW_012115910v1 1755693 1231 + 6934359 GAAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAACGTGT--GGGGATATCAATATTGTTATGGCTATT----GGGGAGGAAAA-ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGAaactt----------tggctttaatttaacaaatgttttctggggtgacagtaTATATGTACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTTTCCAAGACAACCG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCTAGGAATTACCAAATATTTTAGATGTCAGACAAAAGAGAATGCCAGCTA--TGCGATGATAATCAGCAATGGTTGTTAACACAATACATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGATTAATCTTACTATGCTGAGATGTCTTTTCCTCTGTTTTTCCACAAGGAGATCACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAGCTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAAGCTGTCTTTTCTACTTCCTAAATCATCACCTTCATTTGTTCTTGCTTTTTTCCACTATCACTTCCTTATTGACCATATAAAGAATATG-----------TTATTTTGTTATTGTTCATTTTACTCTAATTTCATCAAAA-TTAATAATCCTTTAATTTCATTTTAATTTCAAAGATTAAATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTACTGTCCTCCCTCATACACAT----AGAGATCATATCCATGTACATGATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgactggc------taatcctacagttctggagttcagaagccttaaatgagattcacagggctaacgtcaagctgtgggcagggctgcagtctttctgag-ggctatgtggcagaatctgtgtacttga---ttttttcagcatccagacgccaccttcattccttggaacatggcctcattcttacatc i colAng1.NW_012115910v1 C 0 I 15 s calJac3.chr8 108117937 1240 - 128169293 GGAAGCTGA-TTTTAAAATACTGAAATCATATAGATGACAGTACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTG---GGGGATATAAATATTGTTATACCTATT----GGGGAGGAAAAAATTAGTGAAACCAGTGAGTTAAAGCTGTTGCTTGAAACTT----------CTACTTGAATTTAACACATTTTCTCTGGGGTGACAGTATATATGTATCCATGT---------------------TATTCCCATTCACAGAGGCACTAGAGGTAAGAATTTCTCAAAAACAACTGAGAATCTAAGACTAAAATGAAACCCTACTGGATTTGAAAAGAGAAGGTCCAGAAATT-CCAAATATTTTAGATGTCAGATAACAGAGAATGCCAGGTGTATGCGATGATAATCAGCAATGATTGTTAACACAATATATCAAATCAGTATTTGAATTAGCTTTTAAATTACAAGGACGAATGGATCAAGTCTTGACTCTTTAGTAGATTAATCTTATTATGCTGGGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCGCTAAGCCAAAAACTG--AAGTTCATCAATCAATG--TCTCTAACTGTTCACTAGTTATATACAGTTTTGTAGTTTAAG--CTCTTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTGTTTTTTTCCACTATCACTTCCTTATTGACCATATAATTA--ATATAAGTAGCTTCTTATTTTGTTAGTGTTCATTTTAGTCTAATTGCACCAAAATTTAATAATCCTTTAATTTTATTTTAATTTCAAAGATTACATTAAATCTACATATAAATGAGTGTAAGATTTGCATTTACATTGTTTTGGGCATCAATTTGCTATACTCCCTCATACACAT----AGAGATCATATCCATGCACATGATTTCAAACATCCAAGCAAGAAGCTGGGAAGGGTGCAATATTAAAAGCAGTGGTCAATTACGGTTCTCAACTTCATGACAAAATCACtatatcaacttactcttgctgctggaatcagttgccacaaacttagtatc-tacaataaagtgact-gt------taatcttacagttctggagttcagaagtctgaaatgagactcacagggttaatgtcaagttgtgggctgggctgcattctttctgag-gatgctgtggcagaaactatgtacttaa---ttttttcagcatctagaggccaccttcattccttggaacgtggcctcattcttacatc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735284 1247 - 18371965 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGTACCTGAAAAATAGACAACACCAAGCT---TGTTAAAAGGTGT--GGGGATATAAATATTGTTATGCCTATT----GGGGAGG-AAAAATCAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGAAACTT----------CTACTTGAATTTAACAAATTTTCTCTGGGGTGACAGTATATGTGTATCCATGTGTATATATGAATCCATGAATGTATTCCCATTCACAGATGCACTAGAGGTAAGAATTTCTCAAAAACAGCTG---TTCTAAGACTGAAATGAAACCCTACTGGATTTGAAAAGAGAAAGTCCAGAAATT-CCAAATATTTTAGGTGTCAGATAACAGAGAGTACCAGGTT--TGTGATGATAATCAGCAATGGTTGTTAACACAATATATCAAATCAGTATTTGAATTAGCTTTTGGATTACAAGGACAAACGGATCAAGTCTTGACTCTTTAGTAGATTAATCTTATTATGCTGCGATGTCTTTTCCCCTGGTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTTGCTAAGCCAAAAGCTG--AATTTCATCAATCAATG--TCTCTAACTGTTCACTAGTTGTATACACTTTTGTAGTTTA-------TTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTGTTTTTATTCACTATCGCTTCCTTATTGACCATATAATGA--ATATAAGTAACTTCTTATTTTGTTAGTGTTCATTTTAGTCTAATTTCACCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGATTACATTAAACCTACATATAAATGAGTGTAAGATTTGTATTTAAATTGTTTTTGGCATCAATCTGCTGTACTCCCTCATACACAG----AGAGATTATATCCA-GCACATGGTTTCAAACATCCAAGCAAGAGGATGGGAAGGTTGCAATATTAAAAGCAGTGGTCAATTATGGTTCTCACTTTGATGATAAAATTACtatataaacttcgtctcgctgctataaccagttgccacaaacttagtttt-tacaataaagtgact-gt------taatcttacaattctggagttcagaagtctgaaatgagattcacagggctaactttgagttgttagc-aggctgcattctttctgag-gactatgtatcagaacctatgcacttaa---ttttttctgtgtctagaggccaccttcattccttggaacacggcctcaatcttacatc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394738 1220 + 3566421 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGTACCTGAAAAATAG----CACCAAGCTTTGTGTTAAAGGGTGT--GGGGATATAAATATTGTTATTCCTATT----GGGGAGGAAAAGATTAGTAAAACCAGTGAGTTGAAGCTATTGCTTGAAACTT----------CTACTTGAATTTAATAAATTTTCCCTGGGGTGACAATATATATGTATCCATGT---------------------TATTCCCATTCACAGATGTGCTAGAGGTAAGAAATTCTCTAAAACAACTG---TTCTAAGACTGAAATGAAACCCTACTGGATTTGAAAAGAGAAGGTCCAGAAATT-TCAAATATTTTAGATATCAGATAACAGAGAATGCCAGGTA--TGAGATGATAATCAGCAATGGTTGTTAATACAATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGTATCAAGTCTTGACTCTTTAGTAGATTAATCTTATTTTGCTAGGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATT------------ACCTCAGCTGCTCTCATTTTATGCTCTCGCTAAGCCAAAACCTG--AAGTTCATCAATCAATG--TCTCTAACTGTTCACGAGTTATATACAGTTTTGTAGTTTAAG--CTCTTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTGTTTTTTTCCGCTATCACTTCCTTGTTGACCATATAATGA--ATATAAATAACTTCTTATTTTGTTAGTGTTCATTTTAGTGTAATTTCACCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGATTACATTAAACCTACATATAAATGAGTGTAAGATTTGCATTTACATTGTTTTTGGCATCAATCTGCTACGCTCCCTCATACACAG----AGAGATTATATCCA-GCACATGATTTCAAGCATCCAAGCAAGAAGATGGAAAGGTTGCAACATTAAAAGCAGTGGTCAATTATGGTTCTCACTTTCATGATAAAATTGCtatataaacttcctcttgctgctgtaaccagttgccaccaacttagtatc-tacaataaagtgact-gt------taatgttacagttctggagttcagaagtctgaaatgagactcacagggctaacgtcgagttgttggcagggctgcattctttctgag-gacgatgtggcagaatctatgtatttaa---ttttttctgcttctagaggccaccttcattccttggaacatggccccattcttacatc i cebCap1.NW_016107540v1 C 0 I 217 s aotNan1.NW_018514471v1 1896615 1240 - 9267652 GGAAGCTGATTTTTAAAATACCGAAATCATATAGATGACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTGT--GGGGATATAAATATTGTTATGCCTATT----GGGGAGGAAAAAATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGAAACTT----------CTACTTGAATTTAACAAATTTTCTCTGGGGTGACAGTATATATGTATCCATGT---------------------TATTCCCATTCACAGATGCACTAGAGGTAAGAATTTCTTAAAAACAACTG---TTCTAAGACTGAAATTAAACCCTGCTGGATTTGAAAAGGGAAGGTCCAGAAATT-CCAAATATTTTAGATGTCAGATAACAGAGAATGCCAGGTA--TGTGATGATAATCAGCAATGGTTGTTAACACAATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGATTAATCTTATTATGCTGGGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCGCTAAGCCAAAAGCTG--AAGTTCATCAATCAATG--TCTCTAACTCTTCACTAGTTATATACAGTTTTGTAGTTTAAAATATCTTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTGTTTTTTTCCACTATCACTTCCTTATTGACCATATAATGA--ATATAAGTAACTTCTTATTTTGTTAGTGTTCATTTTAGTCTAATTTCACCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGATTACATTAAACCTACATATAAATGAGTGTAAGATTTGCATTTACATTGTTTTTGGCATCAATTTGCTGTACTCCCTCATACACAT----AGAGATCATATCCATGCACATGGTTTCAAACATCCAAGCAAGAAGATGGGAAAGTTGCAATATTAAAAGCAGTGGTCAATTACGGTTCTCACTTTCATGATAAAATTACTATTTAAACttcctcttgctgctgtaaccagttgccacaaacttagtatcttacaataaagtaact-gt------taatctgacagttctggagttcagaagtctgaaatgagactcacagggctaacatcgagttgtgggcagggctgcattctttctgag-gacgatgtggcagaatctatgtacttaa---ttttttctgtgtcaagaggccaccttcattccttggaacatggcctcattcttacatc i aotNan1.NW_018514471v1 C 0 I 408 s otoGar3.GL873564 12759311 1160 + 14340318 GGGAGGTGATATTTAAAATATTGA-ATCATATGAGTGACAGTAC-------------------------------AGAAGTTGTAGGGGAAAATAAATAAGGT--GTGCCATTAAGGGAGGAGAGAAA-ATTTAACAAACTAATGAGTCAAAAATGTTAATTCCAACTTGTTGCTATTCTAATGCAAATTGCACCAATGTTCTCCAGGGTGACGG-GTATGTGTATCTGTGC---------------------TATTCCTGTGCACAGATGTACT-GAGGGAAAGATTTCTCAGAGACAACTG---CTCCAATATTGAAATTAAGCCATCCTGGCTCTGAAAAGAGAAAACCTAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAACGCCAGGGA--TGTGATGATAATCAGAAGTGGTTGTTAACGCAATATGTCAAATCAATATTTAAATTAACTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGATTAATCTTATTATGTTCAGATTTCTTTTCCCCTGTTTCTCCACAAGGAGATTACAAATTTGCCAACCTTAGCTGGTCTCATTTTACACTCTTGTTAAGCCAGAAGCTATTCAGTTCATCAATCAATGTCTCTCTAAGTGTGCACTGGTCATATACAGTTTTGTGGTTTAAGCTGTTTTTCCAGCTTCCTAAATTATCACTTCTATTTG----TGTTCTTTTTCACTATCACTTCCTTATCAACCATATAATGA--AAAGAAAA------CAATCTT------------------------------------AATAATCTTTGAATTTCACTTACACTTCAAAGATT-----AAACCCA--------------TGCGACTAATTTTTACATTA-TTTTGGCATCAATTTTTGATTCTCCTTCACACACATAAACAGAGACCATATGCAAGCCCATGATTTCAG----TCAAGC-AGAACACAGGCATGTT----TAGTAAGACTGGTGGTAAATTACGGTCATCAGTCTCACAGTGGGATTAGtgtatgagcttcctattgctactgcaacaaattgccacaaatttagtgatgcaaaacaagccaact-atgtaatgttatcctaccattccagcagtcagaagtctgaagtggggcttccaaggctaaaatcaagctgtggacaggtcccctcttcctcccagcagctgtgtgggaggatctgttcctttga---tttttccagcatctgggcactgccttcattccttggaccacagcctctctctcccatc i otoGar3.GL873564 C 0 C 0 a score=4296.000000 s hg38.chrUn_KI270746v1 12212 3 + 66486 cta s panTro5.chr2A 90272706 3 + 111504155 cta i panTro5.chr2A C 0 C 0 s panPan2.chr7 108526194 3 - 162613886 tta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 135433 3 + 150013 cta i gorGor5.CYUI01000341v1 C 0 C 0 s calJac3.chr8 108119177 3 - 128169293 tta i calJac3.chr8 C 0 I 215 s saiBol1.JH378145 736531 3 - 18371965 tta i saiBol1.JH378145 C 0 I 214 s otoGar3.GL873564 12760471 3 + 14340318 tta i otoGar3.GL873564 C 0 I 36 e aotNan1.NW_018514471v1 1897855 408 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e colAng1.NW_012115910v1 1756924 15 + 6934359 I e manLeu1.NW_012105809v1 1180059 9 - 1799296 I e chlSab2.chr21 5713077 52 + 127223203 I e cerAty1.NW_012000909v1 2507390 9 + 10077455 I e macNem1.NW_012011522v1 2786713 9 + 3123512 I e rheMac8.chr3 133475171 10 - 185818997 I e macFas5.chr3 67304854 12 + 192294377 I e nomLeu3.chr4_GL397525_2_random 221625 0 + 1200634 C a score=158565.000000 s hg38.chrUn_KI270746v1 12215 46 + 66486 -------------------ttttttttttaagatggagtctccttctgttgcccaggctggagtg s panTro5.chr2A 90272709 65 + 111504155 tttttctttttttttttttttttttttttgagatggagtctccttctgtcacccaggctggagtg i panTro5.chr2A C 0 C 0 s panPan2.chr7 108526197 49 - 162613886 ----------------ccttttttttttgtagatggagtcttgttatgtcacccaggctggagtg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 135436 50 + 150013 ---------------ttttttttttttttaagatggagtctccttctgttgcccaggctggagtg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 221625 46 + 1200634 -------------------ttttttttttgagatggggtctccttctgtcacccagtctagagtg i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133475181 49 - 185818997 ----------------tttttttttttttgtgacggagtctcgctctgtcacccagactggagtg i rheMac8.chr3 I 10 C 0 s macFas5.chr3 67304866 49 + 192294377 ----------------tttttttttttttgtgacggagtctcgctctgtcacccagactggagtg i macFas5.chr3 I 12 C 0 s macNem1.NW_012011522v1 2786722 45 + 3123512 ----------------tttttttttttttgtgacgga----cgctctgtcacccagactggagtg i macNem1.NW_012011522v1 I 9 C 0 s cerAty1.NW_012000909v1 2507399 49 + 10077455 ----------------tttttttttttttttttttgagtctcgctctgtcacccagactggagtg i cerAty1.NW_012000909v1 I 9 C 0 s manLeu1.NW_012105809v1 1180068 49 - 1799296 ----------------ttttttttttttttttttttttttttgctctgtcacccaggctggagtg i manLeu1.NW_012105809v1 I 9 C 0 s colAng1.NW_012115910v1 1756939 49 + 6934359 ----------------cttttttttttttgagacggagtctcgctctgtcacccagactggagtg i colAng1.NW_012115910v1 I 15 C 0 e otoGar3.GL873564 12760474 36 + 14340318 I e aotNan1.NW_018514471v1 1897855 408 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e chlSab2.chr21 5713077 52 + 127223203 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I a score=1503613.000000 s hg38.chrUn_KI270746v1 12261 281 + 66486 cagtggcacgatctcagctcactgcaacctctgcctcccgggttcaagcgactctgctgcctcagcttcctgagta----gctttgactacaggcacgtgccaccatgcccagttaattttttgtatttttagtagggataggttttcaccatgttagtcaggttggtctcgatctcctgacctcgtcatccacccactccggcctcccaaagtgctgggattaggcgtgagccaccgcgctgggtcctcattcttgtatcttaaaagtcagtgatgttgagtaa s panTro5.chr2A 90272774 279 + 111504155 cagtggcacgatctcagctcactgcaacctctgcttcccaggttcaagtgattcttctgcctcagcttcctgagta----gcttggactacaggcacttgccaccatgcc--gttaattttttgtatttttagtagagatggggtttcaccatgttagccaggatggtctccatctcctgacctcgtgatgaacccactccagcctcccaaagtgctgggattaggcgtgagacaccacgctgggtcctcattcttgtatcttaaaagtcagtgatgttgagtaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108526246 281 - 162613886 cagtggtgcgatctcagctcactgcaacctccgcctcccgggttcaagcaattctcctcccttagcttcctgagta----gcttggactacagacacgtgccaccacacccagctaattttttgtatttttagtagagatggggtttcaccatgttagccaggttggtctcgatctcctgacctcatgatccacccaccccggcctcccaaagtgctgggattaggtgtgagccaccgcactgggtcctcattcttatatcttaaaagtcagtgatgttgagtta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 135486 281 + 150013 cagtggcacgatctcagctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcttcctgagta----gctttgactacaggcacgtgccaccatgcccagttaattttttgtatttttagtagggatgggttttcaccatgttagtcaggatggtctcgatctcctgacttcgtcatccacccacccaggcctcccaaagtgctgggattaggcgtgagccaccgcgctgggtcctcattcttgtatcttaaaagtcagtgatgttgagtaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 221671 281 + 1200634 cagtggcacaatctcagctcactgcaacctctgcctcccgagttcaagcgattctcctgcctcagcttcctgagta----gcttggacttcaggcacctgccaccatgcccagctaattttttgtatttttagtaaggatgggatttcatcatgttagccaggatggtctcgatctcctgacctcgtgatccacccaccccggcctcccaaagtgctgggattaggcttgagccactgcactgggtcctcattcttgtatcttaaaaatcagtgatgttgagtaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133475230 285 - 185818997 cagtggcgcaatctcagctcatcgcaacttccgtctcccaggtccaagtgattctcctgcctcagcctcctgagtagcttgcttggactacaggcacccgctaccatgcccagctaatgttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatcttaaaagtcagcgatgttgagtta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67304915 285 + 192294377 cagtggcgcaatctcagctcatcgcaacttccgtctcccaggtccaagtgattctcctgcctcagcctcctgagtagcttgcttggactacaggcacccgctaccatgcccagctaatgttttgtacttttagtagagacggggtttcaccatgttagccaggatggtctcggtctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatcttaaaagtcagcgatgttgagtta i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786767 285 + 3123512 cagtggcgcaatctcagctcatcgcaacttccgtctcccaggtccaagtgattctcctgcctcagcctcctgagtagcttgcttggactacaggcacctgctaccatgcccagctaatgttttgtaattttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatcttaaaagtcagcgatgttgagtta i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2507448 285 + 10077455 cagtggcgcaatctcagctcatcgcaacttccgtctctcaggtccaagtgattcccctgcctcagcctcctgagtagcttgcttggactacaggcacccgctaccatgcccagctaatgttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatcacctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatcttaaaagtcagcaatgttgagtta i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713129 281 + 127223203 cagtggcgcaatctcagctcatcgcaacctccgtctcccaggttcaagtgattcttctgcctcagcctcctgagta----gcttggactacaggcacccgctaccacgcccagctaattttttgtatttttagtagagacggggtttcaccatattagccaggatggtctcgatctcctggcctcatgaatcacccacctcggactcccaaagagctgggattaggtgtgagccaccacgccaggtcctcattcttatatcttaaaagtcagcgatgttgagtta i chlSab2.chr21 I 52 C 0 s manLeu1.NW_012105809v1 1180117 285 - 1799296 cagtggcgcaatctcagctcatcgcaacttccgtctcccaggtccaagtgattctcctgcctcagcctcctgagtagcttgcttggactacaggcacccgcgaccatgcccagctaatgttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacaccaggtcctcattcttacatcttaaaagtcagcgatgttgagtta i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756988 280 + 6934359 cagcggcgcaatctcagctcatagcaacctccgtctcccaggttcaagtgattctcctgcctcagcctcctgagta----gcttggactacaggcacccgctaccacgcccagctaatttttggtatttttattagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcgtgattcacccacc-cggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttatatcttaaaagtcagggatgttgagtta i colAng1.NW_012115910v1 C 0 C 0 e otoGar3.GL873564 12760474 36 + 14340318 I e aotNan1.NW_018514471v1 1897855 408 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I a score=2007480.000000 s hg38.chrUn_KI270746v1 12542 342 + 66486 ttttgcatgccaccacctccatggttgcctttcttctgccttcttctttcacttataaggaagcttgtgatttcattggtcccactgatttaagataatct-ctcca--------tcattttatc-acaaccttaatttcacttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttagactctgggaattaggacatgaacgtttttgggaggccattcttt---gtctacA-GCAGACTTAATCTATTTACCTGCAGATTAAAGTATTCTTTATTTTTCTGCCTCCCTCTCTT------AATTTTTTTTAAATAATGTGAATTGTAGT---------AAAGagaaagaaagagaag s panTro5.chr2A 90273053 343 + 111504155 tttctcatgccaccacctcgaaggttgcctttcttctgccttcttctttcacttataaggaagtttgtgatttcattgatcccacccatttaagacaatct-ctcta--------tcatttttcc-gcaaccttaatttcactggaaatctaatttcac-actgccgtgcaacctaacatatgtgtatgttagactctgggaattaggacatgaaaatttttgggaggccattcttt--agcctacA-GCAGACATAATCTATTTACCTGCAGATTAAAGCGTTCTTTATTTTTCTGTCTCCCTCTCTT------AATTTTTTTAAACTAATATGAGTTGTAGT---------AAAGagaaagaaagaaaag i panTro5.chr2A C 0 C 0 s panPan2.chr7 108526527 343 - 162613886 tttctcatgctaccacctccatgtttgtctttcttctgccttcttctttcacttataagaaagcttgtgatttcattgagcccacccatttaagataatct-ctcca--------tcattttatt-gcaaccttaatttcacttgaaatctaatttccc-actgccatgcaacctaacacatttgtatgttagactctgggaattaggacatgaacgtttttgggaggccattattc--tgtctacA-GCAGACATAATCTATTTACCTGCAGATTAAAGTGTTCTTTATTTTTCTGCCTCTCTCTCTT------AATTTTTTTTAAATAATATGAATTGTAGT---------Aaagagaaagaaagaaaag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 135767 343 + 150013 tttcgcatgccaccacctctatggttgcctttcttctgccttcttctttcacttataaggaagcttgtgatttcattgatcccactcatttaagataatct-ctcca--------tcattttatc-gcaaccttaatttcacttgaaatctaatttccc-actgccacgcaacctaacatatttgtatgttagactctgggaattaggacatgaacatttttgggaggccattcttt--tgtctacA-GCAGACATAATCTATTTACCTGCAGATTAAAGTGTTCTTTATTTTTCTGCCTCCCTCTCTT------AATTTTTTTTAAATAATGTGAATTGTAGT---------AAAGagaaagaaagaaaag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 221952 342 + 1200634 tttcttatgccaccacctccatggttgtctttcttctgccttcttctttcacttataaggaagcttgtgatttcattgatctcacacatttaagataatct-ctcca--------tcattttatt-gcaaccttaatttcacttgaaatctaatttcac-actgccatgcaaactaacatatttgtatgttagactctgggaattaggacctgaacatttttgggaggccattattt--tgtctacA-GCAGACATAATCTATTTACCTGCAGATTAAAGTGTTCTTTATTTTTCTGCCTCCCTCTCTT------AA-TTTTTTAAAATAATATGAATTGTAGC---------Aaagagaaagaaagaaaag i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133475515 343 - 185818997 ttcctcacgccgccacctccatggttatctttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatct-ctcca--------tcattttatt-gcaaccttaatttcatttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacatgaacatttttgggaggccattattt--cgcctacA-GCAGACAAAATCTATTTACCTGCAGATTAAAATATTCTTTATTTTTCTGCTTCCCTCTCTT------AATTTTTTAAAAATAATATGGATTGTAGT---------aaagagaaagaaagaaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67305200 343 + 192294377 ttcctcacgccgccacctccatggttatctttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatct-ctcca--------tcattttatt-gcaaccttaatttcatttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacatgaacatttttgggaggccattattt--tgcctacA-GCAGACAAAATCTATTTACCTGCAGATTAAAATATTCTTTATTTTTCTGCTTCCCTCTCTT------AATTTTTTAAAAATAATATGGATTGTAGT---------aaagagaaagaaagaaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2787052 342 + 3123512 ttcctcacgccgccacctccatggttatctttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatct-ctcca--------tcattttatt-gcaaccttaatttcatttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacatgaacatttttgggaggccattattt--cgcctacA-GCAGACAAAATCTATTTACCTGCAGATTAAAATATTCTTTATTTTTCTGCTTCCCTCTCTT------AA-TTTTTAAAAATAATATGGATTGTAGT---------aaagagaaagaaagaaaaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2507733 343 + 10077455 ttcctcacgccgccacctccatggttatctttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatct-ctcca--------tcattttatt-gcaaccttaatttcatttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacatgaacatttttgagaggccattattt--cgcctacA-GTAGACAAAATCTATTTACCTGCAGATTAAAATATTCTTTATTTTCCTGCTTCCCTCTCTT------AATTTTTTAAAAATAATATGGATTGTAGT---------AAAGagaaagaaagaaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713410 343 + 127223203 tttctcacgccgccacctccatggttatctttcttctgcctcctcctctcacttataaggaagcttgtgattacattgagcccacccatttaagataatct-ctcca--------tcattttatt-gcaaccttaatttcttttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacctgaacatttttgggaggccattattt--cgcctaTA-GCAGACAAAATCTATTTACCTGCAGATTAAAATATTCTTTATTTTTCTGCTTCCCTCTTTT------AATTTTTTAAAAATAATATGGAATGTAGT---------AAAGagaaagaaagagaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180402 343 - 1799296 ttcctcacgccgccacctccatggttatctttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatat-ctcca--------tcattttatt-gcaaccttaatttcatttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacatggacatttttgggaggccattattt--cgcctacA-GCAGACAAAATCTATTTACCTGCAGATTAAAATATTCTTTATTTTTCTGCTTCCCTCTCTT------AATTTTTTAAAAATAATATAGATTGTAGT---------AAAGagaaagaaagaaaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757268 343 + 6934359 tttctcatgccaccacctccatggttatctttcttctgcctccttctttcacttataaggaagcttgtgattacattgagcccacccatttaagataatct-ctcca--------tcattttatt-gcaaccttaatttcatttgaaatctaatttcat-actgccatgcaacctaacatatttgtatgctaggctgtgtgaattaggacatgaacatttttgggaggccattattt--cacctacG-GCAGACAAAATCTATTTACCTGCAGATTAAAATATTCTCTATTTTTCTGCTTCCCTCTCTT------AATTTTTTTAAAATAATATGGATTGTAGT---------Aaagagaaagaaggaaaaa i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760510 330 + 14340318 ---------------------------------ttctgcctgcctctactacttataaagaagcttgcgactacactgggctcacccacaccggataacctgccccatcttaggttcatttgattagcaaccttaatttcagttgctatctaatcccctcactgccatgtaatctaatatattta-----tagattctggg--ttagtacatggacatttctgggatgcctttattttccttctacaTTTAAACATAATATATTTACGTATAGATTAAAATGTTCTTGGTTTTCCTGCCTCCCACtattttataaaacaatttcaaaataatacaattagtcttttttttttaaaaaaaaaaaaaaGAAG-- i otoGar3.GL873564 I 36 N 0 e aotNan1.NW_018514471v1 1897855 408 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I a score=-26285.000000 s hg38.chrUn_KI270746v1 12884 16 + 66486 -----aaagaaag----------------------aaa--------------------aaaga s panTro5.chr2A 90273396 24 + 111504155 aaaacaaagaaag----------------------aaa-----------------aagaagga i panTro5.chr2A C 0 C 0 s panPan2.chr7 108526870 41 - 162613886 aaaagaaagaaag----------------------aaagagaaaagaaggaaggaaagaagga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 136110 14 + 150013 ------aaaaaag----------------------aaa---------------------agga i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 222294 22 + 1200634 aaaagaaagaagg----------------------aaa-------------------gaagga i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133475858 9 - 185818997 ----gaaagaaaa-------------------------------------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67305543 9 + 192294377 ----gaaagaaaa-------------------------------------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2787394 13 + 3123512 ----gaaagaaaaaaga---------------------------------------------- i macNem1.NW_012011522v1 C 0 I 617 s cerAty1.NW_012000909v1 2508076 7 + 10077455 ----gaaaaaa---------------------------------------------------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713753 9 + 127223203 ----gaaagaaag-------------------------------------------------- i chlSab2.chr21 C 0 I 9 s manLeu1.NW_012105809v1 1180745 9 - 1799296 ----gaaagaaag-------------------------------------------------- i manLeu1.NW_012105809v1 C 0 I 1 s colAng1.NW_012115910v1 1757611 27 + 6934359 ----gaaagaaag----aaagaaaaaaaagaaaga---------------------------- i colAng1.NW_012115910v1 C 0 C 0 e aotNan1.NW_018514471v1 1897855 408 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I a score=70329.000000 s hg38.chrUn_KI270746v1 12900 21 + 66486 aggaaggaaagaaagaaagaa s panTro5.chr2A 90273420 21 + 111504155 aggaaggaaataaagaaagaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108526911 21 - 162613886 aggaaggaaggaaagaaagaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 136124 21 + 150013 aggaaggaaagaaagaaagaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 222316 21 + 1200634 aggaaggaaggaaagaaagaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133475867 15 - 185818997 ------gaaagaaagaaaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67305552 15 + 192294377 ------gaaagaaagaaaaaa i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2508083 21 + 10077455 agaaaagaaagaaagaaaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713771 21 + 127223203 aagaaagaaagaaagaaagaa i chlSab2.chr21 I 9 I 542 s manLeu1.NW_012105809v1 1180755 18 - 1799296 ---aaagaaagaaagaaaaaa i manLeu1.NW_012105809v1 I 1 C 0 s colAng1.NW_012115910v1 1757638 20 + 6934359 -aagaagaaaagaagaaagga i colAng1.NW_012115910v1 C 0 I 1 e aotNan1.NW_018514471v1 1897855 408 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I a score=485721.000000 s hg38.chrUn_KI270746v1 12921 162 + 66486 g----------aaagaa---aaggaggaaatgagagaaggaaggaagggat----ggaaggagggagggaggaagggagaaagcgag--aaaaaagaaagcaagaacacaagaaagaaggaaagaaagaaag-----------------------------------------------------------------------------gaggaagggaggaaggaaaggaggaagagagaatggtaaaagggaggaa s panTro5.chr2A 90273441 234 + 111504155 g----------aaagaa---aaggaggaaatgag----ggaaggaagggag----ggagggaggaagggagaaaggcaggaagggag--aaaaaagaaagcatgaacacaagaaagaaagaaggaaagaaagagaaagaaaaaagaga-aagaaagaacgagagaaagagaaagaaagaaagagagagagagagagaaagaaagaaagaaaggaaaggaggaaggaaaggaggaagagagaatggcaaaagggaggaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108526932 165 - 162613886 g----------aaataaaagaaggaggaaatgagagaaggaaggaagggag----ggagggaggaagggagaaaggcaggaagggag--aaaaaagaaagcaagaacacaagaaagaaggaaagaaagaaag-----------------------------------------------------------------------------gaggaagggaggaaggaaaggaggaagagagaatggtaaaagggaggaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 136145 170 + 150013 g----------aaagaa---acggaggaaatgagagaaggaaggaagggagggaaggagggagggagggagaaaggcagaaagcgag--aaaaaagaaagcaagaacacaagaaagaaagaaggaaagaaag-------------------------------------------------------------------------aaaggaggaagggaggaaggaaaggaggaagagagaatggtaaaagggaggag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 222337 201 + 1200634 g----------aaagaa---aaggaggaaataagagaaggaaggaagggag----ggagggaggaagggagaagggcaggaagggag--aaaaaagaaagcaggaacacaagaaagaaa-aaagaaagaaagagagagagaaagaaaatgagaaagaaagaaaaagaaagaaag-----------------------------------gagaaagggaggaaggaaaggagga--agagaatggtaaaagggaggaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133475882 155 - 185818997 -----------gaaaag---aaggagaaaatgagagaaggaaagaagggag----ggaggaaggaagggagaaaagcaggaagggagaaaaaaaagaaagcaagaacaccagaaagcaagaaagcaa-------------------------------------------------------------------------------------gaagggaggaagaaaaggaggaagagagaatggaaaaaggggggaa i rheMac8.chr3 C 0 I 435 s macFas5.chr3 67305567 154 + 192294377 -----------gaaaag---aaggagaaaatgagagaaggaaagaagggag----ggaggaaggaagggagaaaagcaggaagggagaaaaaaaagaaagcaagaacaccagaaagcaagaaagcaa-------------------------------------------------------------------------------------gaagggaggaagaaaaggaggaagagagaatggaaaaagggggga- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2508104 162 + 10077455 -----------gaaaag---aaggagaaaatgagagaaggaaagaagggag----ggaggaaggaagggagaaaagcaggaagggag-aaaaaaagaaagcaagaacaccagaaagcaagaaagcaagaagg-----------------------------------------------------------------------------gaggaagggaggaagaaaaggaggaagagagaatggaaaaaggggggaa i cerAty1.NW_012000909v1 C 0 I 461 s manLeu1.NW_012105809v1 1180773 162 - 1799296 -----------gaaaag---aaggagaaaatgagagaaggaaagaagggag----ggaggaaggaagggagaaaagcaggaagggag-aaaaaaagaaagcaagaacaccagaaagcaagaaagcaagaagg-----------------------------------------------------------------------------gaggaagggaggaagaaaaggaggaagagagaatggaaaaaggggggaa i manLeu1.NW_012105809v1 C 0 I 389 s colAng1.NW_012115910v1 1757659 173 + 6934359 gaaagaaagaagaaaag---aaggagaaaatgagagaagcaaggaagggaa----ggaggaaggaagggagaaaagcaggaagggag-aaaaaaagaaagcaagaacaccagaaagcaagaaagcaagaagg-----------------------------------------------------------------------------gaggaagggaggaaggagaggaggaagagagaatggaaaaaggggggaa i colAng1.NW_012115910v1 I 1 C 0 e aotNan1.NW_018514471v1 1897855 408 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e chlSab2.chr21 5713792 542 + 127223203 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I a score=146683.000000 s hg38.chrUn_KI270746v1 13083 141 + 66486 tgcagagaaacaaagaaaataaagaggag--aaggacggacg----------gtaaaaggaggaaaggaagggagggaggaaggaagaaaaggagggagggaggaagggagaaaa------aagaaagcaagaaattg--------agaaagaataaaagaaaagaa s panTro5.chr2A 90273675 145 + 111504155 gacaaagaaacaaagaaaataaagaggca--aaggaagg---------------aaaaagaggaaaggaagtgagggaggaaggaagaaaaggagggaaggaggaagggagaaaa-aagggaagaaagcaagaacgtg----agaaagaaagaatatgagaaaagaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108527097 151 - 162613886 tgcagagaaaccaagaaaataaagaggag--aaggaaggacg----------gtaaagggaggaaaggaagggtgggaggaaggaagaaaaggagggagggaggaagggagaaaaaaaggaaagaaagcaagaaattg----agaaagaaagaataaaagaaaagaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 136315 159 + 150013 tgcagagaaacaaagaaaataaagaggag--aaggaaggaaggaaggaaggaggaaaaggaggaaaggaagggagggaggaaggaagaaaaggaggga-ggaggaagggagaaaa-aaggaaacaaagcaagaaattg----agaaagaaagaagaaaagaaaagaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 222538 140 + 1200634 ggcaaagaaacaaagaaaat------gag--aaggaagg-----------------aaggaagcaaggaag-gaaggaaaaaggaggaaaggaagggaggaaggaagggagaaaa-aaggaaagaaagcaagaaagtgagaaagaaagaaagaataagagaaaagaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 s macFas5.chr3 67305721 120 + 192294377 -------agggaaaaaaagtaaagagaagg-aaggaaggaaggaa-----------------ggaaggaaggaaggaaggaaggaaaaaagggaaggaag------gaaggaaaa-aagggaaggaaggaaggaag---------------gaagaaaggaaaggaa i macFas5.chr3 C 0 C 0 s colAng1.NW_012115910v1 1757832 144 + 6934359 --------gggagagaaaataaagagaaggaaaggaaggaaggaac------aaaaaaggaggaaaggaagggagggaagaaggaagaaaaggagggaggaagggagaaagaaaa-agggaaagaaagcaagaaagtg--------gcaaagaatgaaagaaaagaa i colAng1.NW_012115910v1 C 0 I 243 e aotNan1.NW_018514471v1 1897855 408 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I a score=157348.000000 s hg38.chrUn_KI270746v1 13224 195 + 66486 gg---------gagggagaaaggaagggagggaggagggaaggaaga---aaaagaggaaagaa-agaaggaag----gaagga--gaa-tacaagaaagaaaagagagaaaggaaaagaaaaaagaaaaggaaaggaagaggaaaagaagaa-----------agtaaggaagaaggcaag-----------ggaagggaagagaagggaaaggaagatggaaagaaggaaggaag s panTro5.chr2A 90273820 206 + 111504155 ggaagaa----aagggagggagaaagggagggaggagggaaggaaga---ataagaggaaagaa-agaaagaagaaaagaaggaaggaaggagaaaaaagaaaagaaagaaaggaaaagcaaaaaggaaagaaaaggaagaggaaaagaagaa-----------aggaaggaagaa-gcaag-----------ggaagggaagagaagagaaaggaagatggaaagaaggaagcaag i panTro5.chr2A C 0 C 0 s panPan2.chr7 108527248 195 - 162613886 gg---------gagggagaaaggaagggagggaaggaagaaaggaag---aaaagaggaaagaatagaaagaag----gaagga--gaa--aaaagaaaagagaaaaagaaaaagaaagaaaaaagaacagaaaagaaagagaaaaagaagaa-----------aggaaggaagaaggcaag-----------ggaagggaagagaacagaaaggaagatggaaagaaggaaggaag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 136474 190 + 150013 gg---------gagggagaaaggaagggagggaggagggaaggaaga---aaaagaggaa-----agaaggaag----gaagga--gaa-tacaagaaagaaaagagagaaaggaaaagataaaagaaaagaaaaggaagagg-aaagaagaa-----------aggaaggaagaaggcaag-----------ggaagggaagagaagagaaaggaagatggaaagaaggaaggaag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 222678 182 + 1200634 ggaagaaaagggagggagaaaggaagggagggaggcgggaaggaaga---ataagaggaaggaa-gacaggaag----gaaaga--ggg-----------------------aaggaaggaggaaaaaaagaaaagaaagaggaaaagtataa-----------aggaaggaagaaggcaag-----------ggaagggaagagaagagaaaggacgatggaaagaaggaaggaag i nomLeu3.chr4_GL397525_2_random C 0 C 0 s macFas5.chr3 67305841 226 + 192294377 gg---------gagggaagaaggaagaaaaggagggaggaagggagaaagaaaaaaggaaagaa-agcaagaaagtgggaaagaatgaa-ggaaagaaaaagaagaaagaaaaggagaaaatgaaggaagggagggagggaggaaaagagaaaggcaggaagggagaaaaaaagaaagcaagaacaccagaaagcaagaaaaaaagaaagaaagaaagaagggaggaaggaaggaag i macFas5.chr3 C 0 I 84 e aotNan1.NW_018514471v1 1897855 408 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I a score=798807.000000 s hg38.chrUn_KI270746v1 13419 959 + 66486 ACCGCAAATATTAGAAATTCTGGGTTTGTTAGAGAATACGCCATACTGTTTTTTTTTTTTTTTcacttgaaaggaaagagtatctgccattgcagactggatgtcttattggtgatattgttgttcttatcttccacatgattactgagtttgtgcctagtctttccattactaagacaaaagtgttgaagtctgcaaatataattttggatttttctagttcacctttgaattctttcatgtttttcctcatgtatttggaggttctgttgttagctgcataccctaattagtaggatgtttacatcttcttgagaattgattattatattatctattatctctcttctctgatactgtttcttgttctgaactctgttgtgtctaatatcaatgtggtccttcccacagctttattttagtgtttccatgatatggctttctccatatcttgaagataacctatttatatctctatatatttggagcaagATATAAAATTTAGAGTTGATTTTTTAAAGAT-TTTTCAAGATTTAATTCTTATTTGTTtttgttctatttgacattctctgagtttcctatatctgaagtttgattttctgtcacttttttaagaata-ttttggcagttattttgaaaaatatttctttggctccattattttttcctcttttccttttgggatttcaattataACTAGAGTAGGTAATTTCATCTCAGTCTTATGCAGGTACTTTTTCTCAGGGTCTCAGGAATGTAGCCTTCTCACACTTCTGTT-CTTTTCCTGGCTGTGTTGGTGAGCTCAGTGATATTCCTCCTTCACCTTCAAGAACAGTTTTGTT-----TTGTTTTTCCTGTTTTCATACTCCCAGCATCAGGAGTATTCTAAGTGTGGCAGTTTTTGTTGCCTTCCCCTGCATATTAAGTGGAAtatcttggtctatttggactcttataacaaa s panTro5.chr2A 90274026 958 + 111504155 aacgcaaatattagaaaTTCTGGGTTTGTTAGAGAATATGCCATACTG-TTTTTTTTTTTTTTCACTTGAAAGGAAAGAGTATCTGCCATTGAAgattggatgtcttgttggtgatattgttgttcttatcttccatatgattactgagtttgtgcctagtctttccattactaagacaaaagtgttgaagtctgcaaatataattttggatttttctagttcaactttgatttctttcatgttttgcctcatgtatttggaggttctgttgttagctgcataccctaattagtagcaagtttacatcttcttcagaacggattattctattatctattatctctcatctctgatactatttcttgttccaaactctgttgtgtctaatatcaatgtagtcctt-ccacagccttattttagtgtttccatgatatggctttctccatatcttgatgataacctctttatatctctaaatatttggagcaagATATAAAATTTAGACTTGATTTTTTAAAGAT-TTTTCAAGATGTGATTCTTATTACTTTTTGTTCTATTTGACATTCTCTGAGTTTCCTATATTTGAAGTTTGATTTTCTGTCACTTCTTTTAGAATATTTTTGGCAGTTATTTTGAAAAATATTTCTTTTGCTCCATTACTTTTCCCTCTTTTCTTTTTGGGATTTCAATCATAACTAGAGTAGGTAATTTCATTTCAGTCTTATGCAGGTACTTTTTCTCAGGGTCTCAGGAATGTAGCATTCTCACACTTCTGTT-ATTTTCCTGGCTGTGTTGGTGAGCTCAGTGATATTCCTTCTTCACCTTCAAGAGCAGTTTTGTT-----TTGTTTTTCCTGTTTTCATACTCCCAGCATCAGGAGTATTCTAGGTGTGGCAGTTTTTCTTGCCTTCCCCTACATATTAAGTGTGAtatcttggtctgtttggactcttttaacaaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108527443 959 - 162613886 ACCGCAAATATTAGAAATTCTGGGTTTGTTAGAGAATATGCCATACTG-----TTTTTTTTTTCACTTGAAAGGAAAGAGTATCTGCCATTGAAgattggatgtcttgttggtgatattgttgttcttgtcttctatacgattactgagtttgtgcctagtctgtccattactaagacaaaagtgttgaagtctgcaaatataattttggatttttctagatcacctttgatttatttcatgatttacctcatgtatttggaggttctgttgtaagctgcataccctaattagcaggatgtttacatcatcttgagaattgattattatattatatattatctctcatctctgataatatttcttgttctgaactctgttgtgtctaatatcaatgtagtcctt-ccacagctttattttagtgtttccatgatatggctttctccataccttgattataacctatttatatctctatatatttggagcaagATATAAAATTAAGAGTTGATTTTTTAAAGATATTTTCAAGATGTAATTCTTATTTATTtttgttctatttgacattctctgagtttcctatatctgaagtttgattttctgtcacttcttttagaatatttttgacagttattttgaaaaatatttcttctcttccattattttttcctc--ttctttttgggatttcagttataACTAGGGTAGGTAATTTCATCTCAGTCTTATGCAGGTACTTTTTCTCAAGGTCTCAGGAATATAGCCTTCTCACACTTCTGTTCCTTTTCCTGGCTGTGTTGGTGAGCTCAGTGATATTCCTCCTTCACCTTCAAGAGTAgttttgttttgtcttgtttttcctgttttCATACTCCCAGCATCAGAAGTATTCTAAGTGTTGCAGTTTTTGTTGCCTTCCCCTACATATTAAGTGGAAtatctaggtctatttggactcttataacaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 136664 950 + 150013 A-CGCAAATATTAGAAATTCTGGGTTTGTTAGAGAATATGCCATACTG----TTTTTTTTTTTCACTTGAAAGGAAAGAGTATCTGCCATTGCAgattggatgtcttgttggtgatattgttgttcttatcttccacatgattactgagtttgtgcctagtctgtccattactaagacaaaagtgttgaagtctgcaaatataattttggatttttctagttcacctttgatttctttcatgtttt-cctcatgtatttggaggttctgttgttagctgcataccctaattagtaggatgtttacatc-tcttgagaattgattattctattatctattatctctcatctctgatactatttcttgttctgaactctgttgtgtctaatatcaatgt-gtccttcccacagctttattttagtgtttccatgatatggctttctccatatcttgaagataacctatttatatctctatatatttggagcaagATATAAAATTTAGAGTTGATTTTTTAAAGAT-TTTTCAagatgtaattcttatttgtttttgttctatttgacattctctgagtttcctatatctgaagtttgattttctgtcacttcttttagaatatttttggcagttattttgaaaaatatttctttggctccattattttttcctcttttctttttgggatttcaattataACTAGAGTAGGTAATTTCATCTCAGTCTTATGCAGGTACTTTTTCTCAGGGTCTCAGGAATGTAGCCTTCTCA-ACTTCTGTT-CTTTTCCTGGCTGT-TTGGTGAGCTCAGTGATATTCCTCCTTCACCTTCAAGAGCAGTTTGGTT-----TTGTTTTTCCTGTTTTCATACTCCCAGCATCAGGAGTATTCTAAGCGTGGCAGTTTTTGTTGCCTTCCCCTGCATATTAAGTGGAAtatcttggtctatttggactcttataacaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 222860 955 + 1200634 ACCACAAATATTAGAAATTCTCGGTTTGTTAGAGAATATGCCATACTG-----TTTTTTTCTTCACTTGAAAGGAAAGAGTATCTGCCACTGAAgattggatgtcttgttggtgatattgttgttcttatcttccatatgattactgagtttgtgcctagtctgtccattactaagacaaaagtattgaagtctgcaaatataattttggatctttctagttcacctttgatttctttcatgttttacctcatgtatttgggggttctgttgttagctgcataccctaattagtaggatgtttacatcttcttgagaattgattattatattatgtattatctctcatctctgatactatttcttgttctgaactctgttgtgtctaatatcaatgtagtcctt-ccacagctttatgttagtgtttccatgatatggctttctccatatcttgattataacctatttatatctctatatatttggagcaagATATAAAATTTAGAGTTGATTTTTTAAAGATTTTTTCAagatgtaattcttatttatttttgttctatttgacattctctgagtttcctatatctgaaatttgattttctgtcacttcttttagaatatttttggcaattattttgaaaaatatttcttttgctccattattttttcctcttttctttttgggatttcaattataACTAGGGTGGGTAATTTCATCTCAGTCTTATGCAGGTACTTTTTCTCAGGGTCTCTGGAATGTAGCCTTCTCACACTTCTGTT-CTTTTCCTGGCTGTGTTGCTGAGCTCAGTGATATTCCTCCTTCACCTTCAAGAGCAGTTTTGTT-----TTGTTTTTCGTGTTTTCATACTCCCAGCGTCAGGAGTATTCTAAGTGTGGCAGTTTTTGTTGCCTTCCCCGACATATTAAGTGGAAtatcttggtctatttggactcttataacaaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 e aotNan1.NW_018514471v1 1897855 408 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e macFas5.chr3 67306067 84 + 192294377 I a score=323063.000000 s hg38.chrUn_KI270746v1 14378 156 + 66486 ataacatatactgggtgactaaaaaacaacagatatttctcttttcacacttcttgaggctgtaagatctcaggtcaagatgctcacaaattcagtgttg-atgagagcccatttcatggttcatacatggtgccttctttctatgtcctcacatag s panTro5.chr2A 90274984 156 + 111504155 ataacataaactgggtaactaaaaaacagcagatatttcttttttcacacctcttgaggctgtaagatctcaggccaagatgctcacaaattcagtgttg-atgagagccaatttcctggttcatagatggtgccttctttctatgtcctcacatag i panTro5.chr2A C 0 C 0 s panPan2.chr7 108528402 156 - 162613886 ataacataaactgggtgactaaaaaacaacagatactccttttttttcacttcttgaggctgtaagatctcaggtcaagatgctcacaaattcagtgttg-atgacagcccatttcatggtgcataaatggtgccttctttctatgtcctcacatag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 137614 155 + 150013 ataacataaac-gggtgactaaaaaacaacagatatttctcttttcacacttcttgaggctgtaagatctcaggtcaagatgctcacaaattcagtgttg-atgagagcccatttcatggttcatagatggtgccttctttctatgtcctcacatag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 223815 156 + 1200634 ataacataaactgggtgactaaagaacaacagatatttcttttttcatgcttcttgaggctgtaagatctcctgtcaagatgctcacaaattcagcgttg-atgagagcccatttcatgcttcatagatagtgccttctttctatgtcctcacatag i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108119395 156 - 128169293 ataatataaactagctaactaaaaaaccacagatatttctttttt-acacttcttgcggctgtaaagtctcagatcaagatgcccacaagttcagagtttcacaagagcccatttcatggttcatagacggtgccttctttctatgtcctcacatag i calJac3.chr8 I 215 C 0 s saiBol1.JH378145 736748 156 - 18371965 ataatataaactggctgactaaaaaaagacagatatttctatttt-acacttcttgcagctgcaaagtctcagatcaagatgcccacaagttcggagttttacgagagcccatttcatggttcatagatggtgccttctttgtatgtcctcacatag i saiBol1.JH378145 I 214 C 0 s cebCap1.NW_016107540v1 1396175 156 + 3566421 ataatataaactggctgactaacaaaccacagatatttctttttt-acacttcttgcggctgtaaagtctcagatcaagatgcccacaagttcagagtttcacaagagcccatttcatggttgatagatgatgccttctttctatgtcctcacatag i cebCap1.NW_016107540v1 I 217 C 0 e aotNan1.NW_018514471v1 1897855 408 - 9267652 I e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e macFas5.chr3 67306067 84 + 192294377 I a score=4058433.000000 s hg38.chrUn_KI270746v1 14534 1558 + 66486 tgga---------------------------------------a-----ggcacagaagaattccactgagcttcttttataaaggcactaatcccattcataagggctcgg-cccccaagacctggtcacctcccaagtgttctgctctccCTGATCTGTATCATAAACAGATTCTCTTGGATTCCTTACCAATTGCTTGAGAGATCGCAGTGGGTTTGTGggg-gaaaagttttcaagatgatggatctttcccaacttctgcagctgtcagcggtctcccaatctcaccagccccactttgtctttaggaatttattgattattccagctttacttgtcatagtggtgtcaatttgcatccatcctatgtaagtgcatctgtcctatttctccttgcaggtgcttgttttccctcacattttgactcagttcttgttaacctggttgctataaaaataaactcatgactttgaagttagttgagttctttcattgttgtaaggttaggagccctattcCATCCCAGCTCTCCAAAACCCAGAATTTTTTGGGGGTTGAaattttagtctttctctttgaattgtagttttatcctatttcagttacaattttcattttcataatgattaatgacgctaag--ctttttt-tgtgtAGTTGACTCTACCTTTGGATTTTTTT-TCCAAATCCCTTTTCAT---TTCTTTTCTTTATGGTTTTAGAAAATGTAGTTTACATAATTGCAGCTTG---A-TTTTTTACTCA---------------GTTAATGGCATGCTTAATGGAGAGAAAAAATACT----AACTATATTTCCCCTTTTAATTACTGTGCTTTTTTCTTTTTTAAGGAAATATTTCATTATGTTAAA-TTTTAGTGTTATTCTATTTAGCTATTCTTTAAATATTATAGTATTTTGGATTTCACATATAAGTTTGTTACACATCTTGAGTTTATTATGTATAGAGTAAGGCTGTTTTCTCT-------TTTTttaaggtaaaaatcacgtaatataaaattaataacttaagcattttaaagcatacaacgcagttgcttttagtatattcacaatgttccaggacaatttcatcatgtcccttctaaaaacccattaagcataaagttgttacaccctattctgcttccctgagccctaatgaccactaatctgatttatatcccaattgatttgccaattcctgatgtttga-tgtgaataaaatcaagtaatatttgtccttttgtgcacttaacataatgctttcaaatttcacccatattataccatgtataagtacttcattctttgttacagctgaaaa-----------------------------ttgggtgtccatttatgagtcaacaagcatatggattgtttccactttttgactgtatgaatattactgctgtaaatattcatgcacatgtttattttttgagcacctaggttttGtaaga-ttaacagctgactt---aacagaaacaatggaaggcaagaggcagtagaataatatattcaaaagatgcaaaggaaaa-aaaaaactgtcagccacaaattccttatccagcaattagttttcaaaaatgaagataacacaaagacttacccagagaaacagaaatattaactgaagt s panTro5.chr2A 90275140 1561 + 111504155 tgga---------------------------------------a-----ggcacacaagaactccattgagcttcttttacaaaggcactaatcccattcataagggctcgg-cccccaagacctggtcacctcccaagtgttctgctctccCTGATCTGTGTCATATACAGACTCTCTTGGATTCCTTACCAATTGCTTGAGAGATCGCAGTGGGTTTGTGGGG-GAAAAGTTTTCAAGATGATGGATCTTTCCCAACTTCTGCAGCTGTCAGCGGTCTCCCAATCTCACCAGCCCCACTTTG-CTTTAGGAATTTATTGATTATTCCAGCTTTACTTGTCATAGTGGTGTCTATTTGCATCTGTCCTATGTAGGTGCATCTGTCCTCTTTCTCCTTGCAGGTGCTTGTTTTCCCTCACATTTTGACTCAGTTCTTGGCAACCTCGTTGCTATAAAAATAAAGTGATGACTTTGAAGTTAGTTTGGTTCTTTCATTATTGTCAGGTTAGGAACCCTATTCCATCCCAGATCTCCAAAACCCAGACTTTTTGGGGGTTTGAAATTTTAGGCTTTGTCTTTCAATTGTAGTTTTATCTTCTTTCAGCTACCATTTGCATTTTCATAATGATTAATGAGACTAAG--CTTTTTT-TGTGTAGTTGACTGTACCTTTGGA-TTTTTT-CCCAAATACCTCTTTATTTCTTCTTTTCTTTATGGTTTTAGAAAATGTAGTTTACATAATTGCAGCTTG---A-TTTTTTACTCA---------------GTTAATGGCATGCTTAATGGAGAGAAAAAATATT----AAATATATTTCCCTTTTTAATTACTGTGCTTTTTCCTTTTTTAAGGAAATGTTTCATTATGTTAAA-TTTCAGTGTTATTCTACTTAGCTATTCCTTAAATATTATAGTATTTTGGATTTCAAATGTAAATTTGTAACATATCTTGAGTTTATTATGTATAGAGTAAGGCTATTTTCTCTTTTTTG-TTTTttaaggtaagaatcacataatgtaaaagtaataac--aaccattttaaagcatacaatgtacttgcttttagtatattcacaatgttccagggcaatttcatcatgtcccttccaaaaacccattatgcataaagtggttacaccctattctgcttccctgagccctaatgaccactaatctgatttatatcccaattgatttgccaattcctgatgtttca-tgtgaataaaatcaagtaatatttgtccttttgtgcacttaacataatgctttcaaatttcaccaatattataccatatataagtacttcattctttgttatagctgaaaa-----------------------------ttgggtgtccctttatgagtcaacaagcatatggattgtttccactttttgactgtataaatattactgctgtaaatattcatgcacatgtttattttctgagcacctatgttttGtaaga-ttaacagctgactt---aagagaaacaatggaaggcaagaggcagtagaataatatattcaaaagatgcaaagg--aa-aaaaaactctcagccacgaattccttatccagcaattatttttcaaaaatgaagataacacaaagacttagccagataaacagaaacattaactgaagt i panTro5.chr2A C 0 C 0 s panPan2.chr7 108528558 1566 - 162613886 tgga---------------------------------------a-----ggcacactagaactccattgagcttcttttataaaggcactaatcccattcataagggctcag-cccccatgacctggtcacctcccCAGTGTTCTGCTCTCCCTGAACTGTATCATATACAGACTGTCTTGGAGTCCTTACCAATTGCTTGAGAGATCCCAGTGGGTTTGTGGGG-AAAAAGTTTTCAAGATGGTGGATCTTTCCCAACTTCTGCAGCTGTCAGTGGTTTCCCAATCTGACCAGCCCCACTTTGTCTTTAGGAATTTATTGATTATTCCAGCTTTACTTGTCATAGTGGTGTCTATTTGCATCTGTCTTATGTAAGTGCATCCGTCCTCTTTCT-CTTGCAGGTGCTTATTTTCCCTTACATTTTGACTCAGTTCTTGGCAACCTGGTTGCTATAAAAATAAAGTCATGACTTTGAAGTTAGTTTTGTTCTTTCATTGTTGTAAGGTTAGGAGCCCTATTCCttcccagctctccaaaacccagaattttttttggtttgaaattttagcctttctctttgaattgtagttttatcttattccagttacaatttgcattttcctaatgattaatgagactaag--cttttttgtgtgtagttgactgtacctttggattttttt-cccaaatcccttttcaTTTCATATTTTCTTTATGATTTTAGAAAATGTAGTTTATAT-ATTGCAGCTTG---A-TTTTTTACTCA---------------GTTAATGGCATGCTTAATGGAGAGAAAAAATATTAATGAACTATATTTCCCTTTTTAATTACTGTGTTTTTTTCTTTTTTAAGGAAATATTTCATTATGCTAAA-TTTTAGTGTTATTCTACTTAGCTATTCCTTAAATAttatagtatcttggatttcacatataaatttttaacacatcttgagtttattatgtatagagtaaggCTATTTTCTCTTTTTTG-TTTTttaaggtaaaaatcacacaatataaaattcacaacttaaccattttaaagtatacaatgcagttgcttttagtatattcacaatgttccaggacaatttcatcatgtcccttctaaaaacccattatgcataaagttgttacaccgtattctgcttccctgagccctaataaccagtaatctgatttatatcccaattgatttgccaattcctgatgtttca-tgtgaataaaatcaagtaatatctgtccttttgtgcacttagcataatgctttcaaatttcaccaatattttaccatgtataagtacttcattctttgttatagctgaaaa-----------------------------ttgggtgtccatttatgagtcaacaagcatatggattgtttccactttttgactgtatgaatattactgctataaatattcatgtacatgtttattttttgagcacctatgttttGtaaga-ttaacagctgactt---aacagaaacaatggaaggcaagaggcagtagaataatatattcaaaagatgcaaagg-----aaaaaactgtctaccaccaattccttattcagtaattatttttcaaaaatgaagataacacaaagacttacccagataaacagaaatattaactgaagt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 137769 1553 + 150013 tgga---------------------------------------a-----ggcaca--agaactccactgagcttcttttataaaggcactaatcccattcataagggctcgg-cccccaagacctggtcacctcccaagtgttctgctctccCTGATCTGTATCATAAACAGACTCTCTTGGATTCCTTACCAATTGCTTGAGAGATCGCAGTGGGTTTGTGggg-aaaaagttttcaagatgatggatctttcccaacttctgcagctgtcagcggtctcccaatctcaccagccccactttgtctttaggaatttattgattattccagctttacttgtcatagtggtgtctatttgcatccgtcctatgtaagtgcatctgtcctctttctccttgcaggtgcttgttttccctcacattttgactcagttcttggcaacctggttgctataaaaataaactcatgactttgaagttagttgggttctttcattgttgtaaggttaggagccctattcAATCCCAGCTCTCCAAAACCCAGAATTTTTGGGGGGTTGAAATTTTAGGCTTTCTCTTTGAATTGTAGTTTTATCCTATTTCAGTTACAATTTTCATTTTCATAATGATTAATGACGCTAAG--CTTTTTT-TGTGTAGTTGACTCTAACTTTGGATTTTTTT-CCCAAATCCCTTTTCAC---TTCTTTTCTTTATGGTTTTAGAAAATGTAATTTACATAATTGCAGCTTG---A-TTTTTTACTCA---------------GTTAATGGCATGCTTAATGGAGAGAAAAAATATT----AACTATATTTCCCC-TTTAATTACTGTGCTTTTTTCTTTTTTAAGGAAATATTTCATTATGTTAAA-TTTTAGTGTTATTCTATTTAGCTATTCCTTAAATATTATAGTATTTTGGATTTCACATATAAATTTGTTACACATCTTGAGTTTATTATGTATAGAGTAAGGCTGTTTTCTCTT------ttttttaaggtaaaaatcacataatataaaattaataacttaagcattttaaagcatacaacgcagttgcttttagtatattcacaatgttgcaggacaatttcatcatgtcccttctaaaaacccattatgcataaagttgttacaccctattctgcttccctgagccctaatgaacactaatctgatttatatcccaattgacttgccaattcctgatgtttca-cgtgaataaaatcaagtaatatttgtccttttgtgcacttaacataatgctttcaaatttcacccatattataccatgtataagtacttcattctttgttacagctgaaaa-----------------------------ttgggtgtccatttatgagtcaacaagcatatggattgtttccactttttgactgtatgaatattactgctgtaaatattcatgcacatgtttattttttgagcacctatgttttGtaaga-ttaacagctgactt---aagagaaacaatggaaggcaagaggcagtagaataatatattcaaaagatgcaaaga---a-aaaaaactgtcagccaccaattccttatccagcaattagttttcaaaaatgaagataacacaaagacttacccagagaaacagaaatattaactgaagt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 223971 1564 + 1200634 tgga---------------------------------------a-----ggcacacaagaactccattgagcttcttttataaaggcactaatcccattcataagggctcgg-cccccaagaccttgtcacctcccaagtgttccgctctccCTGATCTGTATCATATGCAGACTCTCTTGGATTCCTTGCCAATTACTTGAGAGATCACAGTGGGTTCGTGGGGAAAAAAGTTTTCAAGATGATGGATCTTTCCTAACTTCTGCAGCTGTCAGCAGTCTCCCAATCTGACCAGCCCCACTTTGTCTTTAGGAATTTATTGATTATTCCAGCTTTACTTGTCATAGTGGTGTCTATGTGCACCTGTCCTATGTAAGTGCATCTGTCCTCTTTCTCCTTGCAGGTGCTTGTTTTCCCTCACATTTTGTCTCAGTTCTTGGCAACCTGGTTGCTATAAAAATAAAGTCGTGACTTTGAAGTTAGTTTGGTTCTTTCATTGTTGTAAGGTTAGGAGCCCTATTCCATCCCAGCTCTCCCAAACCCAGAATTTTTTGGGGGTTGAAA-TTTACGCTTTCTCTTTGAATtgtagttttatcttatttcagttacaatttgcattttcataatgattaatgagagtaag--ctttttt-tgtgtagttgactgtacctttggattttttt-cccaaatctcttttcatttcttattttgtttatggttttaGAAAATGTAGTTTACAT-ATTGCAGCTTG---A-TTTTTTACTCA---------------GTTAATGGCATGCTTAATGGAGAGAAAAAATATT----AACTATATTTCCCTTTTTAATTACTGTGCTTTTTTCTTTTTTAAGGAAATATTTCATTATGTTAAA-TGTTAGTGTTATTCTACTTAGCTATTCCTTAAATAttatagtgttttggattttacatataaatttgtaacacatcttgagtttattatgtatagagtaaggCTATTTTCTCCTTTTTG-TTTTttaaggtaaaaatcacataatataaaattaataacttaaccattttaaagcatacaatgcagttgcttttagtatattcacaatgttccaggacaatttcatcatgtcccttctaaaaacccattatgcataaagttgttacaccctattccgcttccctgagccctaatgaccactaatctgatttatatcccaattgatttgccagttcctgatgtttca-tgtgaataaaatcaagtaatatttgtccttttgtgcacttaacataatgctttcaaatttcacccacattataccatgtataagtacttcattctttgttatagctgaaaa-----------------------------ttgggtgttcatttatgagtcaacaagcatatggattgtttccactttttgactgtatgaatattactgctataaatattcatgcacatgtttattttttgagcacctatgttttGtaagatttaacagctgactt---aacagaaacaatggaaggcaagaggcagtagaataatacattcaaaatatgcaaagg---a-aaaaaactgtcagccaccaattccttatccagcaattatttttcaaaaatgaagataacacaaagacttacccagataaacagaaatattaactgaggt i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108119551 1617 - 128169293 tggaggacacacgagaactccactgggcttcttt----atggaa-----ggcatacaagaattgcattgggcttctttcataaagacactaatctcattcataagggcttgcgcccccaagacccagtcatttcccCAGTGTTCTGCTGTCCCTGATCTGTATCATATACAGACTCTCTTGGAGTACTTATCAATTGTTTGAGAGATCCCAATGGGTATGTGGGG-AAAAAGTTTTCAAGATGGTAGATCTTTCCCAATTTCTGCAGCTGTCAGTG-------------ACCAGCACCACCTTGCCTTTAGGAATTAATTGATTATTTCGGCTTTA-TTGTAATAGTGGTATCTGTTTGCATCTGTCCTATGTAAAGGCATTCATCCTTTTACTCTTTGTGGGTGCTCTGTTCCCCTTACATTTTGACCCAGTTCTTGGCAACATGATTGCTATAAAAATAAAGTCATGGCTTTG--TTCTGTCTAGTTCTTTTATTGTGGTAAGGCTAGGAGACCTATTCCTTCCCAGTGCTCCACAACTCAGAA-TTTTTTTGGCTTGAAATTTTAGCTGTTCTCTTTGAAATGTAGTTTTATCATATTTCAGTTGCAATTTCCATTTTTATAATGATTAAGGA----AAG-TTTTTTTT-TCTGTAATTGACTGTACATTTGGGTTTTTTCCCCCAAATCACTTATCATTGCATGTTTTCTTCATGGTTTTAGAAAATGTAGTTTACAT-GTTGCAGCTTG---ATTTTTTTACATGTTGTTGATTTTACATGTTGTTGGTGTGCTTTATGGAGAGAAAGAATATTAATTGATTACATATCCCTTTTTAATTACTGt---------ttttttaaaaaaaattttcattatactaaatttttaGTGATATTCTTCTTAGCTATTCCTTAAATACTATAGCATTTCGAATTTTACATGCAAATTTGTAACACATCTTGAATTTATTATGTATAGAGTAAGTCTGTTTTCTCTTTTTTATTTTTttaaggtaaaatttacataatataaaatttgtaactttcccattttaaagtatacaatgcagttgctttcagtaaatttacaatgttccaggacaatttcatcatgtcccttcc-acaatccattatgcataaagttgtcacctcctattctgctttcctgagtcctagtgaccattaatctgatttatatcccaattgatttgccaattcttgatgtttca-tgtgaataaaatcaagtaatatttgtccttttgtgcacttagcataatgctttcaaatttcacccatattatgccatgtgtacgtacttgattctttgttatagctg---aatcatctcattgagtgaatatatcacattttgtgtgtccatttatgagtcaacaggcatatggattgtttccactttttgactctatgaatattactgctataaatatttatgtacaagtttattttttgaacacctatgttctgtaaga-ttaacagctgacttctcaacagaagaaatgaaaggtaaaaggcagtagactaatatattcaaaaggtgtgaaggg-aa-aaaaaactgtcaaccaccaattttatatccagtaattattttgcagaaatgaaggtaacacaaag----acccagataaacagaaatattagctg--gt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 736904 1603 - 18371965 tggagggcacacaagaactccactgggcttcttt---------atggaaggcacacaagaactcaattgggcttctttcataaagacactaatctcattcataagggcttgt-cccccaagacctggtcatttccc--GTGTTCTGCTGTCCCTGATCTATATCATATACAGACACTCTTGGCATACTTATCAATTGTTTGAGAGACCCCAATGGGTTTGTGGGG-AAAAAGTTTTCAAGATGGTGGATCTTTCCCAACTTCTGCAGCTGTCAGTG-------------ACCAGCACCACCTTGCCATTAAGAATGTATTGATTATTTCAGCTTTACTTGTCATAGTGGTATCTATTTGCATCTGTCCTATGTAAAGGCATTTACCCTTTTTCTCTTTGCAGGCACTCCGTTCCCCTTACATTTTGACCCGGTTCTTGGCAACCTGGTTGCTATAAAAATAAAGTCATGGCTTTGAAGTCTGTCTAGTTCTTTTATTGTTGTATAGCTAGGAGACCTATTCCTTCTCAGCACTCCACAACTCAGAATTTTTTTTGGCTTGAAATTTTAGCTTTTCTCTTTGAAATGTACTTTTATCTTATTTCAGTTGCAATTTGCATTTTTATAATGATTAAGGA----AAG---TTTTTT-TCTGTAATTGACTGTACATTTGGATTTTTTTCCCCACATCCCTTATCATGTCATGTTTTCTTCATGGTTTTAGAAAATGTAGTTTACAT-GTCTCAGCTTG---TTTTTTTTACTCA---------------GTTAATGGTGTGCTTTATGTAGAGAAAAAATATTAATTAACTACATATCCCTTTTTAAATACGGT---------TTTTT-------AAATTTCATTTTACTGAATTTTTAGTGAT-TTTTTTTCAGCTACTCCTTAAATATTAGAGCATTTTGGATTTTACACACAAATTTGTAACACATCTTGAATTTATTATGTATAGTGTAAGGCTGTTTTCTCtttttta-ttttttaaggtaaaattaacataatataaaattcacaactttcccattttaaagtatatgatgcagttgctttcagtaaattcacaacgttccaggacaatttcatcatgtccctccc-ataatccattatgcataaagttgtcacttccttttctgcttccctgagtcctagtgaccattaatatgatttatatcccaattgatttgccaatttctgatgtttcattgtgaataaaatcaagtaatatttgttcttttgtgcacttagcataatgctttcaaatttcaaccaaattatgccatgtgtaagtacttcattctttgttatagctgaaaaatcatctcatcaagtgagtatatcacattttgtgtgtccatttatgagtcaacaggtatatagattgtttccactttttgactctatgaatattattgctataaatatttatgtacaagtttattttttgaacacctatgttctgtagga-ttaacaactgacttctcaacagaaaaaatgaaaggtaaaaggcagtagaataatatattcaaaaggtgtgaagggaaa-aaaaaactgtcaaccaccaattttatagttagtaattatttttcagaaatgaaggtaacacaaaggcttacccagataaacagaaatattagctgaagt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1396331 1609 + 3566421 tggagggcacacgagaactccactgggcttctttatgga----a-----ggcacacaagaactccattgggcttctttcataaagacaacaatcccattcataacggcttgc-ccctcaagacctggtcatttccCCAGTGTTCTGCTGTCCCTGATCTGTATCATATACAGACCCTCTTGGTGTACT----AATTGTTTGAGAGACCCCAGTGGGTTTGTGGGG-AAAAACTTTTCAAGATGGTGGATCTTTCCCAACTTCTGCAGCTGTCAGTG-------------ACCAGCACCACCTTGCCTTTAGGAATTTATTGATTATTTCAGCTTTACTTGTCATAGTGGTATCTATTTGCATCTGTCCTATGTAAAGACATTCATCCTTTTTCTCTTTGCAGGTGCTCTGTTCCCCTTACATTTTAACTCAGTTCTTGGCAATCTGGTTGTTGTAAAAATAAAGTCATGGCTTTGAAGCCTGCCTAGTTCTTTTATTGTTTTAAGGCTAGGAGCCCTATTCCTTCCCAGTGCTCCACAACTCAGAA-ATTTTTTGGCTTGAAATTTCAGCTTTTCTCTTTGAAATGTAGTTTTATCTTATTTCAGTTGCAATTTGCATTTTTATAATGATTAAGGA----AAGTTTTTTTTT-TCTGTAATTGAC--TATATTTGGATTTTTTTCCCCAAATCCCATATCATTGCATGTTTTCTTCATGGTTTTAGAAAATGTAGTTTACAT-GTTGCAGTTTGATTTTTTTTTTACTCA---------------ATTAATGGTGTGCTTTATGGAGAGAACAAATATTAATTAACTACATATCCCTTCTTAATTACTGT---------TTTTTTAAA---AAATTTCATTATACTAAATTTTTAATGATATTTTTCTTAGCTATTCCTTAAATATTATAGCATTTTGGATTTTACATACAAATTTGTAACACATCTTGAATTTATTATGTGTAGAGTAAGTCTGTTTTCTCttttttatttttttaaggtaaaattcacataatataaaattctcaactttcccattttaaagtatacaatgcaattgctttcagtaaattcacaatgttccaggacaatttcatcatgtcccttcc-ataatccattatgcataaaattgtcacctcctattctgcttccctgagtcctagtgatcactaatctgatttatatcccaattgatttgccagttctttatgtttca-tgtgaataaaatcaagtaatatttgtccttttgtgcacttagcataatgctttcaaatttcacccatattatgccacgtgtaagtacttcattctttgttatagctgaaaaatcatctcactgagtgaatatatcacattttttgtgtccatttatgagtcaacaggcatatggattgtttcccctttttgactctatgaatatcactgctataaatatttatgtacaagtttattttttgaacacctatgttctgtaaga-ctaacaactgacttctcaacagaaaaaatgaaaggtgaaaggcagtagaataatatattcaaaaggtgtgaaggaaaa-aagaaactgtcaaccaccaattttatatccagtatttatttttccaaaatgaaggtaacacagagacttacccagataaacagaaatattagctgaagt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1898263 1574 - 9267652 tgga---------------------------------------a-----ggcacacaagaactccattgggcttctttcataaagacactaatcccattcataagggcttgc-tccccaagacctggtcatttcccCAGTGTTCTGCTGTCCCTGATCTGTATCATATACAGACTCTCTTGGCATACTTATCAATTGTTTGAGAGACTCCAATGGGTTTGTGGGG-AAAAAGTTTTCAAGATGGTGGATCTTTCCCAACTTCTGCAGCTGACAGTG-------------ACCAGCACCACCTTGCCTTTAGGAATTTATTGATTATTTCAGCTTTACTTGTCATAGTGGTATCTATTTGCATCTGTCCTATGTAAAGGCATTCATCCTTTTTCTTTTTGCAGGTTCTCCATTCCCCTTACATTTTGACCCAGTTCTTGGCAACCTGGTTGCTATAAAAATAAAGTCATGACTTTGAAGTCTGTCTAGTTCTTTTATTGTTGTAAGGCTAGGAGACCTATTCCTTCCCAGCGCTCCACAACTCAGAA--TTTTTTGGCTTGAAATTTTAGGTTTTCTCTTTGAAATGTAGTTTTATCTTATTTCAGTTGCAATTTGCATTTTTATAATGATTAAGGA----AAG--TTTTTTT-TCTGTAATCGACAGTACATTTGGATTTTTTTCCCCAAATCCCTTATCACTGCATGTTTTCTTCATGGTTTTAGAAAATGTAGTTTACAT-GTTGCAGCATG---ATTTTTTTACTCA---------------ATTAATGGTGTGCTTTATGGAGAGAA-AAATATTAATTAACTATATATCCCTTTTTAATTACTGT---------TTTTTAAAAAA-CAATTTGATTATACTAAATTTTTAGTGATATTCTTCTTAGCTATTTCTTAAATATTACAGCATTTTGGATTTTACATACAAATTTGTAACACATATTGAATTTATTATGTATAGAGTAAGTCTATTTTCTCTTTTTTA-TTTTttaaggtaaaattcacatgatataaaattcacgactttcccattttgaagtatacaatgcagttgctttcagtaaattcacaatgttccaggacaatttcatcatgt-ccttcc-ataatccgttatgcataaatttgctacctcctattctgcttccctgagtcctagtgaccattaatctgatttatatcccaattgatttgccaattcttgatgtttca-tgtgaataaaatcaggtaatatttctccttttgtgcatttagcataatgctttcaaatttcacccatattatgccatgtgtaagtacttcattctttgttatagttgaaaaatcatctcattgagtgaatatatcacatttagtgtgtccatttatgagtcaacaggcatatggattgtttccactttttgactctatgaatattaccgctataaatatttatgtacaagtttattttttgaacacctatgttctgtaaga-ttaacagctgacttctcaacagaaaaaatgaaaggtaaaaggcagtagaataatatattcaaaaggtgtgaaggaaaacaaaaaactgtcaaccacccattttatatccagtaattatttttcagaaatgaaggtaacacaaagacttacccagataaacagaaatattagctgatgt i aotNan1.NW_018514471v1 I 408 I 29 e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e macFas5.chr3 67306067 84 + 192294377 I a score=2548.000000 s hg38.chrUn_KI270746v1 16092 1 + 66486 t s panTro5.chr2A 90276701 1 + 111504155 t i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530124 1 - 162613886 t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139322 1 + 150013 t i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 225535 1 + 1200634 t i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108121168 1 - 128169293 t i calJac3.chr8 C 0 I 4 s saiBol1.JH378145 738507 1 - 18371965 t i saiBol1.JH378145 C 0 I 4 s cebCap1.NW_016107540v1 1397940 1 + 3566421 t i cebCap1.NW_016107540v1 C 0 I 28 e aotNan1.NW_018514471v1 1899837 29 - 9267652 I e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e macFas5.chr3 67306067 84 + 192294377 I a score=20176.000000 s hg38.chrUn_KI270746v1 16093 34 + 66486 attgctggccgacctaccaaaca---aacaaaaaa--ag s panTro5.chr2A 90276702 26 + 111504155 gttgctggcagacctaccatat-----------aa--aa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530125 25 - 162613886 gttgctggcagacctaccatac------------a--aa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139323 34 + 150013 attgctggcagacctaccaaaca---aacaaaaaa--ag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 225536 36 + 1200634 gttgctggcagacctaccataca---aaaaaaaaaacaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108121173 25 - 128169293 cttcaaagcagacctatcatacc--------------aa i calJac3.chr8 I 4 C 0 s saiBol1.JH378145 738512 37 - 18371965 atggaaggcagacctaccataccaaaaaaaaaaaa--aa i saiBol1.JH378145 I 4 C 0 e aotNan1.NW_018514471v1 1899837 29 - 9267652 I e cebCap1.NW_016107540v1 1397941 28 + 3566421 I e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e macFas5.chr3 67306067 84 + 192294377 I a score=340893.000000 s hg38.chrUn_KI270746v1 16127 124 + 66486 aaaaaacaccaaaataaattcctaaggctaaaagcaagttgcacaagacagtcatttgaatccactttttttaaaaagcactggtatacgtaaaattaacattataaaaggcagtagaaatgca s panTro5.chr2A 90276728 123 + 111504155 aaaaaactctaaaa-aaattcctaaggctaaaagcaagttacagaagacagtcacttgaatccacatttttaaaaaagcactgatatacgtaatattgacattataaaagacagtaaaaatgca i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530150 124 - 162613886 aaaaaacactaaaataaattcctaaggctaaaagcaagttacacaagacagtcatttgaatccacattttttaaaaagcactggcataggtaataataacattataaaagacagtagaaatgca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139357 124 + 150013 aaaaaacaccaaaataaattcctaaggctaaaagcaagttgcacaagacagtcatttgaatccactttttttaaaaagcactggtataggtaaaattaacattataaaagacagtagaaatgca i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 225572 124 + 1200634 aaaaaacactaaaataaattcctaaagctaaaagcaagttacacaagacagtcatttgaatccacatttttaaaaaagcactggtataggtaatattaacattataaaagacagtagaaatgca i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108121198 124 - 128169293 aaaaaatattaaaataaattcctaaggctaaaagcaagttccagaagacagttatttaaatacacactttaaaaaaagcactggtgtaggtaataataacattataaaaaacagtagaaatgca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 738549 122 - 18371965 aaaaaatactaaaataaattcctaaggctaaaagcaagtcccagaagacagttatttaaatccacatttt--aaaaagcactggtataggtaataataacattacaaaaggcagtagaaataca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1397969 123 + 3566421 aaaaaatactaaaataaattcctaaggctaaaagcaagttccagaagacagttatataaatccacatttt-acaaaagcactggtataggtaataataacattataaaaaacagtagaaatgca i cebCap1.NW_016107540v1 I 28 C 0 s aotNan1.NW_018514471v1 1899866 123 - 9267652 aaaaaatactaaaataaattcctaaggctaaaagtaagttccagaagacagttatttaaatccacatttt-aaaaaagcactggtataggtaataataacattataaaaaacagtagaaatgca i aotNan1.NW_018514471v1 I 29 I 24 e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e macFas5.chr3 67306067 84 + 192294377 I a score=68846.000000 s hg38.chrUn_KI270746v1 16251 36 + 66486 tgttttctgtttatcataaattgtttataaaataat s panTro5.chr2A 90276851 36 + 111504155 tttcttctctttataataaattgtttattaaataac i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530274 36 - 162613886 tatgttctctttaccataacttgtttataaaataat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139481 36 + 150013 tgttttctgtttatcataaattgtttataaaataat i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 225696 36 + 1200634 tgttttctctttatcataaattgtttataaaataat i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108121322 35 - 128169293 ca-tttctctttatcataacttatttataaaataat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 738671 36 - 18371965 cactttctctttatcataacttatttataaaataat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398092 36 + 3566421 cattttctctttatcataacttatttataaaataat i cebCap1.NW_016107540v1 C 0 C 0 e aotNan1.NW_018514471v1 1899989 24 - 9267652 I e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e macFas5.chr3 67306067 84 + 192294377 I a score=22062.000000 s hg38.chrUn_KI270746v1 16287 12 + 66486 atgtgtataatg s panTro5.chr2A 90276887 12 + 111504155 atgtgtataatg i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530310 12 - 162613886 atgtgcataatg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139517 12 + 150013 atgtgtataatg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 225732 12 + 1200634 atgtgtataatg i nomLeu3.chr4_GL397525_2_random C 0 C 0 s calJac3.chr8 108121357 12 - 128169293 atgtgcataatg i calJac3.chr8 C 0 I 2821 s cebCap1.NW_016107540v1 1398128 12 + 3566421 atgtgcataatg i cebCap1.NW_016107540v1 C 0 I 335 e aotNan1.NW_018514471v1 1899989 24 - 9267652 I e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e saiBol1.JH378145 738707 0 - 18371965 C e macFas5.chr3 67306067 84 + 192294377 I a score=228032.000000 s hg38.chrUn_KI270746v1 16299 286 + 66486 gccgggcacgatggctcatgcctgtaatctcagcatttcgggaggctgaggcaggcgtattacgaggccaggagatcgagagcatcctggctaacataatgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtgatggcgggtgcctgtaggcccagctactcgggaggctgaggcaggagaatggcatgaagccaggagatggagcttgcagtgagcggagactgtg--ccactgcactccagcctgggcaacagagggagactccgtctc------------------aataat s panTro5.chr2A 90276899 292 + 111504155 gccaggcacgatggctcacacctgtaatctcagcactttgggaggccaaggcgggcgtattacgaggccaggagatcgagaccatcctggctaacacagtgaaaccccgtttctactaaaaatacaaaaaattagccgggcgtgatggcggacgcctgtagtcccagctactcgggaggctgaagcagaaaaatggcatgaagccgggagatggagcttgcagtgagcggagattgtg--tcactgcactccagcctgggtgacagagggagactccgtctc------------aatgataataat i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530322 306 - 162613886 gctgggcacaaaggctcacgcctgtaatctcagcactttgggtggccgagatgggcgtattacgaggccaggagatcaagaccatcttggctaacacagtgaaaccctgtctctactaaaaatacaaaaaataagccaggcgtgatggcaggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcatgaaccagggagacggagcttgcagtgagcagagattgtgctccactgtactccagcgtgggtgacagagtgagactccatgtcaataataataataatgataataat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139529 294 + 150013 gccgggcacgatggctcacacctgtaatctcagcatttcgggaggctgaggcgggcatattacgaggccaggagattgagagcatcctggctaacataaggaaaccccgtctctactaaaaatacaaaaaatta-tcgggcgtgatggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaagccaggagatggagcttgcagtgagcggagactgtg--ccaatgcactccagtctgggcaacagagggagactccgtctc---------aatgataataataat i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 225744 298 + 1200634 gccgggcacgatggctcatgcctgtagtcccagcactttgggaggccaaggcgggcgtattttgaggccaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaaaattagtcgggcgtgatggcaggtgcctgtagtcccagctactcgggaggctgaagcagaagaatggcatgaagccgggagatggatcttgcagtgagcggagattgtg--ccactgcacttcagcctgggcaacagagggagactccgtctc------aatgataataataataat i nomLeu3.chr4_GL397525_2_random C 0 C 0 e aotNan1.NW_018514471v1 1899989 24 - 9267652 I e cebCap1.NW_016107540v1 1398140 335 + 3566421 I e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e saiBol1.JH378145 738707 0 - 18371965 C e calJac3.chr8 108121369 2821 - 128169293 I e macFas5.chr3 67306067 84 + 192294377 I a score=9555.000000 s hg38.chrUn_KI270746v1 16585 7 + 66486 aataata s panTro5.chr2A 90277191 7 + 111504155 aataata i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530628 7 - 162613886 aataata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139823 7 + 150013 aataata i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 226042 7 + 1200634 aataata i nomLeu3.chr4_GL397525_2_random C 0 C 0 s aotNan1.NW_018514471v1 1900013 7 - 9267652 aataata i aotNan1.NW_018514471v1 I 24 C 0 e cebCap1.NW_016107540v1 1398140 335 + 3566421 I e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e saiBol1.JH378145 738707 0 - 18371965 C e calJac3.chr8 108121369 2821 - 128169293 I e macFas5.chr3 67306067 84 + 192294377 I a score=84648.000000 s hg38.chrUn_KI270746v1 16592 51 + 66486 tatgcataatgtattgctgagtatttgacacgtagaaatgtaatatgtcta s panTro5.chr2A 90277198 51 + 111504155 tgtgcataatgtattgctgagtttttgacatgtagaaatgtaatacgtcta i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530635 51 - 162613886 tgtgcataatgtattgctgagtatttgacatgtagaaatgtaatatgtcta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139830 51 + 150013 tatgcataatgtattgctgagtatttgacatgcagaaatgtaatatgtcta i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 226049 42 + 1200634 tgtgcataatgtattgctgagtatttgacatgtagaaatgta--------- i nomLeu3.chr4_GL397525_2_random C 0 C 0 s saiBol1.JH378145 738707 51 - 18371965 tgtgcataatgtattgctgagtatttaacatgtagaaatgtaatatgtctg i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1900020 51 - 9267652 tgtgcataatgtattgctgagtatttaacatgtagaaatgtaatatgtcta i aotNan1.NW_018514471v1 C 0 C 0 e cebCap1.NW_016107540v1 1398140 335 + 3566421 I e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e calJac3.chr8 108121369 2821 - 128169293 I e macFas5.chr3 67306067 84 + 192294377 I a score=47781.000000 s hg38.chrUn_KI270746v1 16643 22 + 66486 taacatatttttcagtaacttc s panTro5.chr2A 90277249 22 + 111504155 taacatattttccagtaacatc i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530686 22 - 162613886 taacatattttccaataacatc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139881 22 + 150013 taacatattttccagtaacatc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 226091 18 + 1200634 ----atattttccagtaacatc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s saiBol1.JH378145 738758 22 - 18371965 taacatattttccaataacatc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398475 22 + 3566421 taacgtattttctaataacatc i cebCap1.NW_016107540v1 I 335 C 0 s aotNan1.NW_018514471v1 1900071 22 - 9267652 taacatattttccaataacatc i aotNan1.NW_018514471v1 C 0 C 0 e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e calJac3.chr8 108121369 2821 - 128169293 I e macFas5.chr3 67306067 84 + 192294377 I a score=7876.000000 s hg38.chrUn_KI270746v1 16665 3 + 66486 aaa s panTro5.chr2A 90277271 3 + 111504155 aaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530708 3 - 162613886 aaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139903 3 + 150013 aaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 226109 3 + 1200634 aaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 s macFas5.chr3 67306151 3 + 192294377 agg i macFas5.chr3 I 84 C 0 s saiBol1.JH378145 738780 3 - 18371965 aaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398497 3 + 3566421 aaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1900093 3 - 9267652 aaa i aotNan1.NW_018514471v1 C 0 C 0 e colAng1.NW_012115910v1 1757976 243 + 6934359 I e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e chlSab2.chr21 5713792 542 + 127223203 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e calJac3.chr8 108121369 2821 - 128169293 I a score=14200.000000 s hg38.chrUn_KI270746v1 16668 3 + 66486 aag s panTro5.chr2A 90277274 3 + 111504155 aag i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530711 3 - 162613886 aag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139906 3 + 150013 aag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 226112 3 + 1200634 aag i nomLeu3.chr4_GL397525_2_random C 0 C 0 s macFas5.chr3 67306154 3 + 192294377 aaa i macFas5.chr3 C 0 C 0 s chlSab2.chr21 5714334 3 + 127223203 aag i chlSab2.chr21 I 542 C 0 s colAng1.NW_012115910v1 1758219 3 + 6934359 aag i colAng1.NW_012115910v1 I 243 C 0 s saiBol1.JH378145 738783 3 - 18371965 aag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398500 3 + 3566421 aag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1900096 3 - 9267652 aag i aotNan1.NW_018514471v1 C 0 C 0 e manLeu1.NW_012105809v1 1180935 389 - 1799296 I e cerAty1.NW_012000909v1 2508266 461 + 10077455 I e macNem1.NW_012011522v1 2787407 617 + 3123512 I e rheMac8.chr3 133476037 435 - 185818997 I e calJac3.chr8 108121369 2821 - 128169293 I a score=8593757.000000 s hg38.chrUn_KI270746v1 16671 1033 + 66486 gaggtagttggaagaaaaatgtatcgtgataaggtaatcactctagttggtaaagtaataattactaaaatgtattgttggctttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaataaaagagatttgtataagaatgatgtttctatgtgttactaaaattttactagtataagttggaagatgatttgaataattaattttccatatacctatatggtaaacttacaacaacaacaaaaattctctaaaatatatagtaaaataattcattagtaatctaaagttccctattttagaaaatattcattcattgcaaaataaagcaataaagataaatatttgagaaatatacaaaacaaacggtaaaatggcagacataaacagaattataccaattataatattaaatgtgaacagattaa--aattcaatcaagaggcacagattgtcagactggattaaaacaagtgatcccaatatacgc-------------------tgagatgcaaggatactaatgggttgaaagtaaaaagatgacaaaaaatatcatgcaaagggcaatcataagaacactgaactccttatactcataacacacaatatagactattaaaaatgtgaataggattttaaaaatttatactgtagtaagaagggggtcaacgctttaggaagacatagctattacaatcacgtatgc-acagatatgagctaaattgtttcctctatatagatgctgaaatcctaaccactgaatatgacctcatgaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagcctgaattcaatatga-------------------------ctgatgttcttataaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagacttccactaaaccaccagaagctagacacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgacac s panTro5.chr2A 90277277 1032 + 111504155 gaggtagttggaagaaaaatgtattgtgataaggtaatcactctagatggtaaagtaataattactaaaatgtattgttggctttgtaactttagtagatgtaatgtgtaaagtgataatactttaaaatggaggaaataaaaaagatttatataagaatgatgtttctatgtattactaaaagtttaatattataaattggaagatgatttgaataattaattttccatatacctatatggtaaacttacaacaacaataaaaagtctcaaaaatatataataaaataattcattagtaatctaaagttccctattttaaaaaatattcttgcattgcaaaataaagcaataaagaaaaatatttg-gtaatatataaaacaaacggtaaaatggcagacataaatagaattataccaattataatcttaaatgtgagcagattaa--aatccattccagaggcagagattgtcagactggattaaaacaagtgatcccaatatacgc-------------------tgagatgcaaggatactaacggattgaaagtaaaaagatgacaaaaaatgtcctgcaaagagcaatcataagaacactgaactcattatactcataacacacaatatagactattaaaaatgtgaataggattttaaaaatttatattgtagtaaaaagggggtcaacgctttaggaagacatagctattacaatcatgtatgc-acagataggagctaaattgtttcctctatatagacgctgaaattctaaccactgaatatgacctcattaggaaataggttgtttgcagctgatcaagttaagatacaatcagatgagcctgaattcaatatga-------------------------ctgatgtccttgcgaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccactaaaccaccagaagcgagaaacaaggcacagaacaggctttctctcatagcccctgaagggaccatccctgctgacac i panTro5.chr2A C 0 C 0 s panPan2.chr7 108530714 1051 - 162613886 ggggtagttggaagaaaaatgttttgtgataaggtaattactatagatggtaaagtaataattactaaaatgtactgtcagctttataactttaatagatgtaatgtgtaaagtgataatagtttaaaatggaggaaataaaacagatttgtataagaatgatgtttctatgtattactaaaatttagctagtgtaaattggaagatgatttgaataattaattctccatatacctgtgtggtaaacttacaacaacaacaaaaattctc-aaaatatatagtaaaataattcattagtaatctaacgttctctattttagaaaatattcattcattgcaaaataaagcaataaagaaaaatatttgagaaatatacaaaacaaacagtaaaatggcagacataaatagaattataccaattataatattaaatgtgagcagattaa--aatccagtcaagaggtagagattgtcagactggattaaaacaagagatcccaatatatgctgtctagagaaggcacatttgagatgcaaggatactaatggattgaaagtaaaaaggtgacaaaaaatatcatgcaaagagcaatcataagaacactgaactcattatactcacaacacacaatatagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaatgctttaggaagacatggctattacaatcatatatgc-actgatatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatacaacctcattaggaaataggttcttcgcaggtggtcaagttaagataaaatcagatgagccttaattcaatatga-------------------------ctgatgtctttataaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattatgaggacagagattagccaaggaatgccaaagactgccactaaaccaccagaagctagaaacaaggcatagaacagacttcctctcatagcccttgaagggaccatccctgctgacac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139909 1032 + 150013 gaggtagttggaagaaaaatgtatcatgataaggtaatcactctagatggtaaagtaataattactaaaatatattgttggctttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaacggaggaaataaaagagatttgtataagaatgatgtttctatgtgttactgaaattttactagtataagttggaagatgatttgaataattaattttccatatacctatatggtaaacttacaacaacaacaaaaattctcaaaaatatatagtaaaataattcattagtaatctaaagttccctattttagaaaatattcattcattgcaaaataaagcaataaagataaatatttgagaaatatacaaaacaaacggtaaaatggcagacataaacagaattataccaattataatattaaatgtgaacagattaa--aatccaatcaagaggcagagattgtcagactggattaaaacaagtgatcccaatatacgc-------------------tgagatgcaaggatactgatgggttgaaagtaaaaagacgacaaaaaa-atcatgcaaagggcaatcataagaacactgaactcattatactcataacacacaatatagactattaaaaatgtgaataggattttaaaaatttatactgtagtaagaagggtgtcaacgctttaggaagacatagctattacaatcatgtatgc-acagatatgagctaaattgtttcctctatatagatgctgaaatcctaaccactgaatatgacctcatgaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagcctgaattcaatatga-------------------------ctgatgtccttataaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccactaagccaccagaagctagacacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgacac i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 226115 1032 + 1200634 gagacagttggaagaaaaatgtattgtgataagataatcactgtagatggtaaagtaataattactaaaatgtattgttggctttgtaactttaatagatataatgtgtaaagtgataatactttaaaatggaggaaagaaaagagatttgtataagaatgatgtatctatgtattactaaaattttactagtataaattggaagatgatttgaataattaattttccatatacctatatggtaaacttacaacaacaacaaaatttctcaaaaatatatagtaaaataattcattagtaatctaaagttccctattttagaaaatattcattcattgcaaaataaagcagtaaagaaaaatatttgagaaatatacaaaacaaatggtaaaatggcagacataaatagaattatgccagttataatattaaatgtgagcagattaa--aatccaatcaagaggcagagattatcagactggatgaaaacaagtgatcccaatatatgc-------------------tgagatgcaaggatactaatggattgaaagtaaaaagatgacaaaaaatatcatgcaaagagcaatcataagaacactgaactcattatactcataacacacaatatagattatt-aaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaacgctttaggaagacatagcaattacaatcatgtatgc-acagatatgagctaaattgtttcctttgtatagatgctgaaatcctaaccactgaatatgacctcattaggaaataggttctttgcagttgatcaagttaagataaaatcagatgagccttaattcaatatga-------------------------ctgatgtccttacaaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaagaatgccaaagactgccactaaaccaccagaagctagaaacaaagtatagaacagactttgtctcatagcccttgaaggtaccatccctgctcacac i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133476472 1052 - 185818997 gaGGTAGCTGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaagtaataattattcaaatgtattatcgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaac-agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaacttacaatgacaac-aaaattctcaaaaatatatagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaataataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatatacgctgtctagagaaggcacatttgagatgcaaggatactaatggattgaaagtaaaaagatgacaaaaaatatcatgcaaagagcaaccataagaacactgaactcattatactcctaatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatatgacctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatgg-------------------------ctgatgtccttatacaaagaagaaatttgagtagagggagacacacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgatgc i rheMac8.chr3 I 435 C 0 s macFas5.chr3 67306157 1050 + 192294377 gaGGTAGCTGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaagtaataattattcaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaac---agatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaacttacaatgacaac-aaaattctccaaaatatataataaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaataataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatatacgctgtctagagaaggcacatttgagatgcaaggatactaatggattgaaagtaaaaagatgacaaaaaatatcatacaaagagcaaccataagaacactgaactcattatactcctaatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatatgacctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatgg-------------------------ctgatgtccttatacaaagaagaaatttgagtagagggagacacacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgatgc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2788024 1052 + 3123512 gaGGTAGCTGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaagtaataattattcaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaac-agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaacttacaatgacaac-aaaattctcaaaaatatatagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaagtgacagacataaatagaataataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatatacgctgtctagagaaggcacatttgagatgcaaggatactaatggattgaaagtaaaaagatgacaaaaaatatcatacaaagagcaaccataagaacactgaactcattatactcctaatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatatgaccttattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatgg-------------------------ctgatgtccttataaaaagaagaaatttgagtagagggagacacacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgatgc i macNem1.NW_012011522v1 I 617 C 0 s cerAty1.NW_012000909v1 2508727 1050 + 10077455 gaGGTAGCTGGAAGAAAAATGTATTGTGATAAGGTAATTACTATACATGGtaaagtagtaattattaaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaaa-agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaacttacaatgacaacaaaaattctcaaaaatatatagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatggaattataccaattataatattatatgtgagcagattaaataatccaatc--gaggtacagatggtcagactggattaaaacaagtgatcccaatatatgctgcctagagaaggcacatttgagatgcaaggatactaat-gattgaaagtaaaaagatgacaaaaaatatcataaaaagagcaaccataagaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggattttaaaaatttgtattgtagtaataaggggatcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctgtatagatgctgaaatcttaacctctgaatatgacctcattaggaagtaggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatga-------------------------ctgatgtccttataaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattttgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgacgc i cerAty1.NW_012000909v1 I 461 C 0 s chlSab2.chr21 5714337 1042 + 127223203 gaggtag-tggaagaaaAATGTATTGTGATAAGGTAATTACTATAGATGGtaaggtaataattattaaaatgtattgttgattttgtaactttaatagatgtaatgtgtaaagtgataatattttaaaatggaggaaaaa--agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagtttatttgaataattaattttccatatacctgtatggttaacttacaacgacaacaaaaatcctcaaaaatatatagtacaataattcattagtaaactaaagttctctattttagaaaat----attcattgcaaaataaagcaataaagaaaaatatttgagaaatacaccaaacaa----taaaatgacagacataaatagaattataccaattataatattatatgtaagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatatacgctgtctagagaaggcacatttgagatgcaaggatactaatggattgaaagtaaaaagatgacaaaaaatatcatacaaagagcaaccataagaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggagtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctacatagatgctgaaatcctaatctctgaatatgccctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatga-------------------------ccgatgtccttataaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccactaaacccccagaagctagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgac-c i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1181324 1048 - 1799296 gaGGTAGCTGGAAGAAAAATGCATTGTGGTAAGGTAATTACTATAGATGGtaaagtaataattattaaaatgtattattgattttgtaactttaatagatgtaatatgtaaagtgatagtactttaaaatggaggaaaa-----agacttgtataagaatgatgtttctatgtattactaaaattcagttcgtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaacttacaatgacaacaaaaattctcaaaaatatatagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaattataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatatatgctgtctagagaaggcacatttgagatgcaaggatactaat-gattgaaagtaaaaagatgacaaaaaatatcataaaaagagcaaccataagaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggattttaaaaatttgtattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctacataggtgctgaaatcttaacctctgaatatgacctcattaggaaataggttctttgcaggtaatcaagttaagataaaatcagatgagccttaatccaatatga-------------------------ctgatgtccttataaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattttgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgacgc i manLeu1.NW_012105809v1 I 389 C 0 s colAng1.NW_012115910v1 1758222 1044 + 6934359 gaGGTAGTTGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaggtaataattattaaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaa----agatttgtataagaatggtgtttctatgtgttactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggcaaacttacaatgacaacaaaaattctcaaaaatgtatagtaaaataattcattagtaaactaaagttctctattttagaaaacactcattcactgcaaaataaagcaattaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaattataccaattataatattatatgtgagcagattaaataatccagtcaagaggtagagatggtcagactggattaaaacaagtgatcccaatataagctgtctagagaaggcacatttgagatgcaaggatactagtggattgaaagtaaaaagatgacaaaagatatcatacaaagagcaaccataaaaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggatttttaaaatttgtattgtaataataaaggggtcaactcttcaggaagacatagctattacaatcatatatgc-actgatatgagctaaattgtttcctctacatagatgctgaaatcctaacctctgaatatgacctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcaaatgagccttaattcaatatga-------------------------ctgatgtccttataaaaagaagaaatttgagtagagggagacatacacacat-----gtaccatgtgattatgagggcagagattagccaaggaatgccgaagactgccattaaaccaccagaagctagaaacaaggcatagaaca-actttctctcatagcccttgaagggaccatccctgctgacac i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 738786 1051 - 18371965 taggtatttggaagaaaattgcattgtgataagataattactatagatggtaaagtaatcattattaaactgtattgttggttttgtaactttaatagatgtaatgtataaagtgacggtcctttaaaatggatgaaataaaagacacttgtatgag---aatgtttctatgtgttactaaagtttagctagtataaattggaagttgatttgaataattaattttccatatacctatagggtaaacttgcaac-acaac-aaaactctcaaaaatatatagtaaaataagtcattgggaaactaaagtt--ctgttttagaaaatattcatttattgcaaaataaagcaataaagaaaaatatttgagaaatatacaaaacaaatagtagaatggcagacataaatagaattgtaccaattattatattaaatgtgagcagattaagcaacccaatcaagaggcagagattgtcagactgaattaaaacaagggatcccaatataggctgtctagagaaggcaaattcgggatgcaaagatactaacaaattgaaagtaaaaagatgacaagacatattatgcaagcagcaaccataagaacactgaacccattatactcatagcacacaatgtagactattgaaaatgtgaatagagttttaaaaatttatattgtagtcataagggggtcaactctttaggaagac-------------------atgc-actgatatgagctacattgcttcccctctgaagatgctgaaatactaacctctgaatatgacctcattaggaaatacattttctgcatatgatcaggttaagataaaatcagacgagctttaattcaatatgattgatgtcttattaaaagaagaaatttgatgt-cttattaaaagaagaaatttgagtaaagggagacatacacatagggagagcaccatgtgattatgaaggcagagataagccaaggaatgccaacgactaccactaaatcaccagaagctagaaacaaggcatagaacagactgtctctcatagccctt-aaggtaccatacctgctggccc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398503 1030 + 3566421 taggtatttggaagaaaattgtattgtgataaggtaattactatagatggtaaagtaatcatcattaaactgtattgttggctttgtaactttaatagatgtaatgtataaagtgatgatactttaaaatggatgaaataaaagagacttgtatgagaataatgtttccatgtattattaaaatttagctagtataaattggaagtttatttgaataattaattttccatatacctatagggtaaacttacaacaacaac-aaaactctcaaaaatatatagtaaaataattcattgggaaactaaagtt--ctattttagaaaatattcatttattacaaaataaagcaataaagaaaaatatttgagaaatatacaaaacaaacagtaaaatggcagacataaatagaattgtaccaattattatattaaatgtgagcagattaaacaacccaatcaagaggcagagattgtcggattgatttaaaataagtgatcccaatataggctgtctagagaaggcaaattcgggatgcaaagatactaacagcttgaaagtaaaaagatgacaagacatattatgcaagcagcaaccataagaacactgaacccattatactcatagcacacaatgtaggctattgaaaatgtgaatagagttttaaaaatttatattgtagtaataagggggtcaagtctttaggaaaac-------------------atgc-actgatatgagctatattg-tttccctctgaagatgctgaaatcctaacctctgaatatgacctcattaggaaatacgttttttgcagactatcaagttaagataaaatcagatgagccttaattcaatatga-------------------------ttgatgt-cttattaaaagaagaaatttgagtaaagggagacatacacatagggagagcaccatgtgattatgaaggcagagattagccaaggaatgccaaaaactgcctctaaatcaccagaagctagaaacaaagcatagaacagactgtctctcatagcccttgaagggaccatccctgctgacac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1900099 1028 - 9267652 taggcatttggaagaaaattgtattgtgataaggtaattactatagatagtaaagtcataattgttaaaatgtattgttggctttgtaactttaatagatgta----ataaagtgacaatactttaaaatggat-aaataaaagagacttgtataagaataatgtttctatgtattactaaaatttagctagtataaattggaagttgatttgaataattaattttccatatacctatatggtaaacttacaacaacaacaaaaactctcaaaaatatatagtaaaataattcattgggaaactaaagtt--ctattttagaaaatattcatttattacaaaataaagcaataaagaaaactatttgagaaatatacaaaacaaacagtaaaatggtagacatgaatagaattgtaccaattattatattaaatgtgagcagattaaacaacccaatcaagaggcagagattgtcagactcaattaaaacaagtgatcccagtataggctgtctagagaaggcaaattcgggatgcaaagatactaacagattgaaagtaaaaagatgacaagacatattatgcaagcagcaaccatatgaacactgaacccattatactcatagcacacaatgtagactattgaaaatgtgaatagagttttaaaaatttatattgtagtaataagggggtcaactctttaggaagac-------------------atGCTAGtgatatgagctacattgtttcccctccaaagatgctgaaatcctaacctccgaatatgacctcattaggaaatatgttttttgcagatgatcaagttaagataaaatcagacgagctttaattcaatatga-------------------------tcgatgt-cttattaaaagaagaaatttgagtaaagggagacatacacatagagagagcatcatgtgattatgaaggcagagattagccaaggaatgccaaaggctgccactaaatcaccagaagctagaaacaaggcatagaacagactgtctctcatagcccttgaagggaccatccctgctgacac i aotNan1.NW_018514471v1 C 0 C 0 e calJac3.chr8 108121369 2821 - 128169293 I a score=99216.000000 s hg38.chrUn_KI270746v1 17704 11 + 66486 ctcaagctcag s panTro5.chr2A 90278309 11 + 111504155 ctcaatctcag i panTro5.chr2A C 0 C 0 s panPan2.chr7 108531765 11 - 162613886 ctcaatctcag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 140941 11 + 150013 ctcaagctcag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 227147 11 + 1200634 ctcaatctcag i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133477524 11 - 185818997 ctcaatctcaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67307207 11 + 192294377 ctcaatctcaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2789076 11 + 3123512 ctcaatctcaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2509777 11 + 10077455 ctcaatctcag i cerAty1.NW_012000909v1 C 0 C 0 s papAnu3.chr3 58180772 11 + 180432695 ctcaagcctgt i papAnu3.chr3 N 0 I 221 s chlSab2.chr21 5715379 11 + 127223203 ctcaatctcag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1182372 11 - 1799296 ctcaatctcag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1759266 11 + 6934359 ctcaatctcag i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 739837 11 - 18371965 ctcagtctcag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1399533 11 + 3566421 ctcagtctcag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1901127 11 - 9267652 ctcagtctcag i aotNan1.NW_018514471v1 C 0 C 0 e calJac3.chr8 108121369 2821 - 128169293 I a score=80955.000000 s hg38.chrUn_KI270746v1 17715 9 + 66486 aattttagc s panTro5.chr2A 90278320 9 + 111504155 acttttagc i panTro5.chr2A C 0 C 0 s panPan2.chr7 108531776 9 - 162613886 acttttagc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 140952 9 + 150013 atttctagc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 227158 9 + 1200634 atttttagc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133477535 9 - 185818997 acttttagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67307218 9 + 192294377 acttttagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2789087 9 + 3123512 acttttagc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2509788 9 + 10077455 acttttagc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5715390 9 + 127223203 acttttagc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1182383 9 - 1799296 acttttagc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1759277 9 + 6934359 acttttagc i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 739848 9 - 18371965 acttttagc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1399544 9 + 3566421 acttttagc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1901138 9 - 9267652 acttttagc i aotNan1.NW_018514471v1 C 0 C 0 e papAnu3.chr3 58180783 221 + 180432695 I e calJac3.chr8 108121369 2821 - 128169293 I a score=28931.000000 s hg38.chrUn_KI270746v1 17724 3 + 66486 ttc s panTro5.chr2A 90278329 3 + 111504155 ttc i panTro5.chr2A C 0 C 0 s panPan2.chr7 108531785 3 - 162613886 ttc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 140961 3 + 150013 ttc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 227167 3 + 1200634 ttc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133477544 3 - 185818997 ttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67307227 3 + 192294377 ttc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2789096 3 + 3123512 ttc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2509797 3 + 10077455 ttc i cerAty1.NW_012000909v1 C 0 C 0 s papAnu3.chr3 58181004 3 + 180432695 ctc i papAnu3.chr3 I 221 I 20 s chlSab2.chr21 5715399 3 + 127223203 atc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1182392 3 - 1799296 ttc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1759286 3 + 6934359 ttc i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 739857 3 - 18371965 ttc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1399553 3 + 3566421 ttc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1901147 3 - 9267652 ttc i aotNan1.NW_018514471v1 C 0 C 0 e calJac3.chr8 108121369 2821 - 128169293 I a score=23978.000000 s hg38.chrUn_KI270746v1 17727 3 + 66486 cag s panTro5.chr2A 90278332 3 + 111504155 cag i panTro5.chr2A C 0 C 0 s panPan2.chr7 108531788 3 - 162613886 cag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 140964 3 + 150013 cag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 227170 3 + 1200634 cag i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133477547 3 - 185818997 caa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67307230 3 + 192294377 caa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2789099 3 + 3123512 caa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2509800 3 + 10077455 cag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5715402 3 + 127223203 cag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1182395 3 - 1799296 cag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1759289 3 + 6934359 tag i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 739860 3 - 18371965 cag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1399556 3 + 3566421 cag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1901150 3 - 9267652 cag i aotNan1.NW_018514471v1 C 0 C 0 e papAnu3.chr3 58181007 20 + 180432695 I e calJac3.chr8 108121369 2821 - 128169293 I a score=45840.000000 s hg38.chrUn_KI270746v1 17730 4 + 66486 gact s panTro5.chr2A 90278335 4 + 111504155 gact i panTro5.chr2A C 0 C 0 s panPan2.chr7 108531791 4 - 162613886 gact i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 140967 4 + 150013 gact i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 227173 4 + 1200634 gact i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133477550 4 - 185818997 gact i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67307233 4 + 192294377 gact i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2789102 4 + 3123512 gact i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2509803 4 + 10077455 gact i cerAty1.NW_012000909v1 C 0 C 0 s papAnu3.chr3 58181027 4 + 180432695 gact i papAnu3.chr3 I 20 N 0 s chlSab2.chr21 5715405 4 + 127223203 gact i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1182398 4 - 1799296 gact i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1759292 4 + 6934359 gact i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 739863 4 - 18371965 gact i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1399559 4 + 3566421 gact i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1901153 4 - 9267652 gact i aotNan1.NW_018514471v1 C 0 C 0 e calJac3.chr8 108121369 2821 - 128169293 I a score=4446243.000000 s hg38.chrUn_KI270746v1 17734 547 + 66486 ataagactataaatgtatgttgttcaaggcacccagtttgtgttacttggt------------tatggcagccctagaaaactaatacatgaactaataacaaagcataataacatgaagcaaaaattgacaaaagaggagcatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--acgcaactaagagaaactgtctgaataaactttaccaaaactctggaaaatggtcaaaagattacaacaaccgagtgaaagcagactcaagaaaaagacaactggaaaactttatgacatttttaacttgcgtttgccccagcaaattggcagttttgaagtgtcagaagcccacgttcccagtgaggaaccctgg-tccttgg-tccaaaggaacaagagaagatcttacccgcaaattattatg--tgtctgttctgactggtctgggggatacctaaaggactaatgaaaggctttttt--tttttttctgtgttgctagaatacagaacagataaggaatgaacattattaagaaactctgca s panTro5.chr2A 90278339 542 + 111504155 gtaagactataaatgtatgcttctcaaggcacccagtttgtgttacttggt------------tatggcagccctagaaaactaatacatgaactaataacaaagcataataacatgaagcaaaaattgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctatcatttccccacagaaacatc--acacaactaagagaaactgtcggaataaactttgccaaaactctggaaaatggtcaaaagattacaacaaccaagtgaaagcagactcaagaaaaagacaactggaaaactttaccacatttttaacttgtctttgccccagcaaattggcagttttgaagtttcagaagcccacgttcccagtgaggaagcctgg-tccatgg-tccaaaggaacaagagaagatcttacccgcaaattattatg--tgtctgttctgactggtctgggggatacctaaaggactcatgaaaggc-----t--tttttttctgtgttgcttgaatacagaacAGATAAGGAATGGACATTATTAAGAATCTCTGCA i panTro5.chr2A C 0 I 1589 s panPan2.chr7 108531795 543 - 162613886 ataagacaataaatttatgttgttcaaggcactcagcttgtgttacttggt------------tatggcagccctagaaaactaatacatgaactaataaaaaagcataataacatgaagcaaaagttgacaaaaGAGGAGCatcagcaaaatggcaatggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaagagaaattctcagagtaaactttgccaaaactctggaaaatggtcaaaagattacaacaaccaagtgaaagcagactcaataaaaagacaactagaaaactttatgacatttttaacttgcctttgccccagcaaa--ggcagttttgaagtgttagaagcccatgttcccagtgtggaaccctgg-tccatggctccaaaggaacaagagaagctcttacccgcaaattattatgtatgtctgttctgactggtctgggggatacctaaaggactaatgaaaggc-----t--tttttttctgtgttgctagaatacagaacagataaggaatggacattattaagaaactctgca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 140971 546 + 150013 ataagactataaatgtatgttgttcaaggcacccagtttgtgttagttggt------------tatgggagccctagaaaactaatacatgaactaataacaaagcataataacatgaagcaaaaattgacaaaaGAGGAGCatcagcaaaa-agcagtggagacagctgcaatctttcatttccccacagaaacatc--acacaactaagagaaactgtccgaataaactttgccaaaactctggaaaatggtcaaaagattacaacaaccgagtgaaagcagactcaagaaaaagacaactggaaaactttatgacatttttaacttggctttgccccagcaaattggcagttttgaagtgtcagaagcccatgttcccagtgaggaaccctgg-tccgtgg-tccaaaggaacaagagaagatcttacccgcaaattattatg--tgtctgttctgactggtctgggggatacctaaaggactcatgaaaggctttttt--tttttttctgtgttgctagaatacagaacagataaggaatggacattatcaagaaactctgca i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 227177 551 + 1200634 ctaagactataaatttatgttgttcaaggcacccagtttgtgttacttggtaatatatggttacatggcagccctagaaaactaacacatgaactaataacaaagcataataacatgaagcaaaaattgataaaa---GAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--acacaactaagagaaactgtcagaataaactttgccaaaactctggaaaatggtcaaaagattacaacaaccaagtgaaagcagactcaagaaaaagacaacttgaaaactttgtgacatttttaacttgcctttgccccagcaaattgtcagttttgaagtgtcagaagcccacgttcccagtgaagaaccctgg-tccatgg-tccaaaggaacaagagaagatcttacccataaattattttg--tgtctgttctgactggtctgggggatacctaaaggactaatgaaaggc-----t--tttttttctgtgttgctggaatacagaacagataaggaatggacactattaagaaactctgca i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133477554 544 - 185818997 ataagacaataaatttatgttgttcaaggcacccagtttgtg-tacttggt------------tgaggcagccctagaaagctaatacatgaaataataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctacaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaactttaaaactttatgacatttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattatgtatgtctgttctgactggtctgggagatacctaaaagactaatgaaaggc-----a--tttttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67307237 544 + 192294377 ataagacaataaatttatgttgttcaaggcacccagtttgtg-tacttggt------------tgaggcagccctagaaagctaatacatgaactaataacagagtataataacacgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaactttaaaactttatgacatttttaatttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattatgtatgtctgttctgactggtctgggagatacctaaaagactaatgaaaggc-----a--tttttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2789106 544 + 3123512 ataagacaataaatttatcttgttcaaggcacccagtttgtg-tacttggt------------tgaggcagccctagaaagctaatacatgaactaataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgacatttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattatgtatgtctgttctgactggtctgggagatacctaaaagactaatgaaaggc-----a--tttttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2509807 544 + 10077455 ataagacaataaatttatgttgttcaaggcactcagtttgtg-tacttggt------------tgaggcagccctagaaagctaatacatgaactaataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgtcagaatgaactttaccaaaactctggaaaatggtgaaaagatgacaacaaccaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgacatttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattatgtatgtctgttctgactggtctgggagatacctaaaagactaatgaaaggc-----a--tttttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgca i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5715409 544 + 127223203 ataagataataaatttatgttattcaaggcacccagtttgtg-tacttggt------------taaggcagccctagaaagctaatacatgaactaataacagaatataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactaccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgacatttttaacttgcctgtgccccagcaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattatgtatgtctgttctgactggtctgggagatacctaaaagactaacgaaaggc-----a--tttttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1182402 544 - 1799296 ataagacaataaatttatgttgttcaaggcacccagtttgtg-tacttggt------------tgaggcagccctagaaagctaatacatgaactaataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggaaacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgtcagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaatcaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgacatttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggggaagatcttacctgcaaattattatatatgtctgttctgactggtctgggagatacctaaaagactaatgaaaggc-----a--tttttttctgtgttgctagaatgtagaacagataaggaatggacataatgaagagactctgca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1759296 532 + 6934359 ataagacaataaatttatgttgttcaaggcacctagtttgtg-tacttggt------------taaggcagccctagaaagctaat-------------acagagtttaataacacgaagcaaaaaatgacgaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaataaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagt-aaagacaacttgaaaactttatgacatttttaacttgcctgtgccccagcaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaaccctgg-tccatggctccagaggaacaagagaagatcttacccgcaaattattatgtatgtctcttctgactggtctgggagatacctaaaagactaatgagaagc-----atttttttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagaaactctgca i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 739867 539 - 18371965 gtaagacaa-aaatttatgttgttcaaggcacccagtttgtgttgtttggt------------tatggcagccctagaaaactaatacattaactaataacagagtataataaaatgaagcaaacattgacagaa-----CCGTCATCaaaatggcagtggagacagcttcaatctttcatttcaccacagaaacatc--aaaaaactaaaagaaactgtcagaataaactttgtcaaaactctggaaaatagtgaaaatattacaacaaccaagtgaaagcagactcaagaaaaagacaacttgaaaactttatgacatttttaacttgcctatgcctcgctgaagtggcagttttgaagggtcagaagcctacattccccatgtggaaccctgg-tccatggttccaatggaataagagacgatcttactggaaaatgattatatatgtttgttccaactggtctgggggatacctaaaggactaatgagaggc-----a--attttatctgtgctgctagaattcaaaatagataagaaatggacatttttcagaaactgtgca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1399563 542 + 3566421 gtaagacaa-aaatttatgttgttctaggcactcagtttgtgttgcttggt------------tatggcagccctagaaaactaatacatgaactaacaacagagtataataacatgaagaaaaaattgacagaa-----CCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatcaaaaaaaactaaaagaaactgtcagaataaactttgtcaaaactctggaaaatagtgaaaatattacaacaaccaagtgaaataagactcaagaaaaagacaacttgaaaacttcatgacatttttaacttgcctatgcctcactgaagtggtagttttgaagtgtcagaagcctacattccccatgtggaaccctggttccatggttccaatggaataagagaagatcttactggaaaatgattatatatgtttgttctaactggtctgggggatacataaagcactaacgaaaggc-----a--attttctctgtgttgctagaattcaaaatagataaggaatggacattattcagaaactgtgca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1901157 539 - 9267652 gtaagacaa-aaatttatgttgtttaaggcacccagtttgtgttgcttggt------------tatggcagccctagaaaactaacacaTGAACTAATAACAGAGTATAATAACATGAAACAAAAGTTCACAGAA-----CCatcagcaaaatggcagtgaagacagctgcaatctttcatttccccacagaaacatc--aaaaaactaaaagaaaccgtcagaataaacttcgtcaagactctggaaaatagtgaaaatattacaacaaccaagtgaaagcagactcaagaaaaagacaacttgaaaactttatgacatttttaacttgcctatgcctcactgaagtggcagttttgaagtgtcagaagcctacgttccccatgtggaaccctgg-tccgtggttccaatggaataagagacgatcttactggaaaatgattatatatgtttgttctaactggtctgggggatacctaaagcactaatgaaaggc-----a--attttatctgtgttgctagaattcaaaatagataaggaatggacattattcagagactatgca i aotNan1.NW_018514471v1 C 0 C 0 e calJac3.chr8 108121369 2821 - 128169293 I a score=2841666.000000 s hg38.chrUn_KI270746v1 18281 398 + 66486 aggagacctaacaaaccacagacgcttagggcaaaaattagagtttacacatatagtagatcaccttcagcacaggaagaaaagttggagaagagtatttggaaaactaagacattcaaaatcattcacgtacatgggagagtctagaaagtcacatctatgcataggttaagccacatgctggcaaatgtcataagaagaccctacacttttaccttggccgatccctcccctcagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttgtggcggctttaaagaacccagcacaaagccagtctacatggcctagagacatattttgctagataatgattacttgtttttc--tttgtttttgttgtatt s panPan2.chr7 108532338 400 - 162613886 aggagacctaacaaaaaacagatgcttagggcaaaaattagagtttacacatatagtagatcaccttcagcacaggaagaaaagttggagaagagtatttggaaaactaagacattcaaaatcattcatgtacatgggagagtctagaaagtcacacgtatgcataggttaagccacatgctgacaaatgtcgtaagaagaccctacacttttaccttggctgatccttacccccagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttgtgccagcttcaaagaactcagcacaaagccagtctgcatggcctagagacatattttcctggataatgattactcgtttttctttttgtttttgtagtgtt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141517 398 + 150013 aggagacctaacaaaccacggatgcttagggcaaaaattagagtttacacatatagtagatcaccctcagcacaggaagaaaagttggagaagagtatttggaaaactaagacattcaaaatcattcacgtacatgggagagtctagaaagtcacatgtatgcataggttaagccacatgctgacaaatgtcataagaagaccctacacttttaccttggccgatccctcccctcagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttgtgccggctttaaagaacccagcacaaagccagtctgcatggcctagagacatattttgctggataatgattacttgtttttc--tttgtttttgttgtatt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 227728 397 + 1200634 aggagacctaacaaactacagatgcttagggcaaaatttagagtttacacatatagtagatcaccttcagcacaggaagaaaagttggagaagagtatttggaaaactaagacattcaaaatcattcacgtacatgggtgagtctagaaagtcacatgtatgcataggttaagccacatgctgacaaatgtcat---aagaccctacacttttaccttggctgatccctcccctcagtgcaagctctgtgcaagagtgaacctgaacttcactcagtgcaagagtgaacacacactttgtgccggctttaaagaacccagcacaaagccagtctgcatggcctagagacatattttgctggataatgattacttgtttttctttttgtttttgttgtatt i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133478098 400 - 185818997 aagagacctaacaaactacagatccttagggcaaaaattagagtttacacatataatagatcaccttcagcacgggaagaaaagttggagaggagtatttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagactctacacttttaccttggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagcgaacacacactttctgccagcttcaaagggcccagcacaaagccagtctgtgtggcctagacacatattttgctggctaatgattacttgtttttctttttgtttttgctgtgtt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67307781 400 + 192294377 aagagacctaacaaactacagatccttagggcaaaaattagagtttacacatataatagatcaccttcagcacgggaagaaaagttggagaggagtatttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagactctacacttttaccttggctgatccctaccctcagtgcaagTTCTGTGCAAGAGTGAACTTGAACTTCACTCAGTGCAAGAGCGAACACACACTTTCTGCCAGCTTCAAAGGGCCCAGCACAAAGCCAGTCTGTGTGGCCTAGACACATATTTTGCTGGCTAATGATTACTTGTTTTTCTTTTTGTTTTTGCTGTGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2789650 400 + 3123512 aagagacctaacaaactacagatccttagggcaaaaattagagtttacacatataatagatcaccttcagcacgggaagaaaagttggagaggagtatttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccaccagctgacaaatgtcataagaagactctacacttttaccttggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagcgaacacacactttctgccagcttcaaagggcccagcacaaagccagtctgcgtggcctagacacatattttgctggctaatgattacttgtttttctttttgtttttgctgtgtt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510351 400 + 10077455 aagagacctaacaaactacagatccttagggcaaaaattagagtttacacatatagtagatcaccttcagcatgggaagaaaagttggagaggagtatttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagaccctacacttttaccttggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttctgccagcttcaaagggcccagcacaaagccagtctgcgtggcctagacacatattttgctggctaatgattacttgtttttctttttgtttttgctgtgtt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5715953 400 + 127223203 aagagacctaacaaactacagatccttagggcaaaaattagagtttacgcatacagtagatcacctgcagcacgggaagaaaagttggagaggagtatttgcaaaattaagacattcaaaatcattcacgtacatgggagagtctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcgtaagaagaccctacacttttaccttggctgatccctaccctcagtgcaagcTCTGTGCAAGAGTGAACTTGAACTTCACTCAGTGCAAGAGTGAACACACACTTTTCGCCAGCTTCAAAGGGCCCAGCACAAAGCCAGTCTGTGTGGCCTAGACACATACTTTGCTGGCTAATGATTACTtgtttttctttttgtttttgctgtgtt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1182946 400 - 1799296 aagagacctaacaaactacagatccttagggcaaaaattagagtttacacatacagtagatcaccttcagcatgggaagaaaagttggagaggagtatttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagaccctacacttttaccttggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttctaccagcttcaaagggcccagcacaaagccagtctgcgtggcctagacacatattttgctggctaatgattacttgtttttctttttgtttttgctgtgtt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1759828 400 + 6934359 aagagacctaacaaactacagatccttagggcaaaaattagagtttccacatatagtagatcaccttcagcatgggaagaaaagttggagaggaatatttggaaaattaagacatttaaaatcattcccgtaaatgggagagtctagaaagtcacatgtatgcataggttaagccacatgctgacaaacgtcgttagaagaccctacacttttaccttggctgatccctaccctcagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacgctttctgccagcttcagagagcccagcacaaagccagtctgcgtggcttagacacatattttgctggctaatgattacttgtttttctttttgtttttgctgtgtt i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740406 379 - 18371965 aggagatccaacaaattacagattcttaggggaaaaattagagtttacacatgcagtagatcaacttcagcacaggaagaaaagttggagaagagtatttggaaaattaagacactcaaaatcattcacgtgcataggagagtttagaaattcacatgtatgcacaggttaagccacgagctgacaaatgtcctaaaaggaccctacacttttatcttggctgattcctaccctcagtgcaagttcagcataata------------ttca--------aagagtgaacacacatgctgtgccaggttcagacagccctgcacaaagccagtctacctggcctagagatatatttttctggataatgtttacttgtttat-tctttgtgtttgttttgtt i saiBol1.JH378145 C 0 I 5 s cebCap1.NW_016107540v1 1400105 379 + 3566421 aggagatccaacaaattacagattcttaggggaaaaattagagtttacacatacagtagatcaacttcagcacagaaagaaaagttgaagaatagtatttggaaaattaagacattcaaaatcattcatgtgcatgggagagtttagaaagtcacacatatgcataggttaagccacaagctgacaaatgtcctaagaggaccctacacttttatcttggctgattcctatcttcagtgcaagctcagcataata------------ttca--------aagagtgaacacacacactgtgccaggttcagacagcccagcacaaagccagtctgcctggcctagagatatattttgctggataatgtttacttgtttgt-tctttgtatttgttttgtt i cebCap1.NW_016107540v1 C 0 I 13 s aotNan1.NW_018514471v1 1901696 379 - 9267652 aggagagccaacaaattacagattcttagggaaaaaactagagtttacacatacagtagatcatcttcagcacaggaagaaaagttggagaagagtatttggaaaattaagacattcaaaatcattcatgtgcataggagagtttagaaattcacatgtatgcataggttaagccacaagctgacaaatgtcctaagaggaccctacacttttatcttggctgattcctaccctcagtgcaagctcagcataata------------ttca--------aagagtgaagacacacactgtgccaggttcagacagcccagcacaaagccagtctgcctggcgtagagatatattttgctggataatgtttacttgtttat-tctttgtgtttgttttgtt i aotNan1.NW_018514471v1 C 0 I 13 e calJac3.chr8 108121369 2821 - 128169293 I e panTro5.chr2A 90278881 1589 + 111504155 I a score=61862.000000 s hg38.chrUn_KI270746v1 18679 18 + 66486 tgcc--tgtttgcttaattc s panPan2.chr7 108532738 18 - 162613886 tttg--tgtttgcgtagttc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141915 18 + 150013 tgcc--tgtttgcttaattc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 228125 18 + 1200634 tgcc--tgtttgcttagttc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133478498 20 - 185818997 tacctgtgtttgcttagttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308181 20 + 192294377 TACCTGTGTTTGCTTAGTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790050 20 + 3123512 tacctgtgtttacttagttc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510751 20 + 10077455 tacctgtgtttgcttagttc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716353 20 + 127223203 tgtctgtgtttgcttagttc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183346 20 - 1799296 tacctgtgtttgcttagttc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760228 20 + 6934359 tgcctgtgtttgcttagttc i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740790 8 - 18371965 tgacagtg------------ i saiBol1.JH378145 I 5 C 0 e aotNan1.NW_018514471v1 1902075 13 - 9267652 I e cebCap1.NW_016107540v1 1400484 13 + 3566421 I e calJac3.chr8 108121369 2821 - 128169293 I e panTro5.chr2A 90278881 1589 + 111504155 I a score=22595.000000 s hg38.chrUn_KI270746v1 18697 7 + 66486 ctgacat- s panPan2.chr7 108532756 7 - 162613886 ctgacat- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141933 7 + 150013 ctgacat- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 228143 7 + 1200634 atgacat- i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133478518 7 - 185818997 ctgatat- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308201 7 + 192294377 CTGATAT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790070 7 + 3123512 ctgatat- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510771 7 + 10077455 ctgatat- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716373 7 + 127223203 ctaatat- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183366 7 - 1799296 ctgatat- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760248 7 + 6934359 ctgatac- i colAng1.NW_012115910v1 C 0 C 0 s aotNan1.NW_018514471v1 1902088 7 - 9267652 -caaagtg i aotNan1.NW_018514471v1 I 13 C 0 e cebCap1.NW_016107540v1 1400484 13 + 3566421 I e saiBol1.JH378145 740798 0 - 18371965 C e calJac3.chr8 108121369 2821 - 128169293 I e panTro5.chr2A 90278881 1589 + 111504155 I a score=810716.000000 s hg38.chrUn_KI270746v1 18704 126 + 66486 acaagaaaatcactgtcaaaacattagcttaacattcgttaaggaaatgaaaagacttcggtgaccacactttataaagaaaacagttttgt-acatcactttggaaaatttcact-aaaaataaaaa s panPan2.chr7 108532763 125 - 162613886 acaagaaaatcactgtcaaaacattagcttaacatttgttaaggaaacaaaaagacttcagtgaccacaccttataaagcaaacagttttgtaaaatcactttggaaaatttcact-aaaa--aaata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141940 126 + 150013 acaagaaaatcactgtcaaaacattagcttaacatttgttaaggaaacgaaaagacttcggtgaccacaccttataaagcaaacagttttgt-acatcactttggaaaatttcact-aaaaataaaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 228150 125 + 1200634 acaagaaaatcactgtcaaaacattagcttaacatttgttaaggaaac-aaaagacttcagtgaccacaccttataaagcaaacagttttgt-aaattgctttggaaaatttcact-aaaaaaacaaa i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133478525 127 - 185818997 agtagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaatgacttcagtgatcacaccttatagagcaagcagttttgtaaaatcactttggaaaatttcactaaaaaaaactaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308208 127 + 192294377 AGTAGAaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaatgacttcagtgatcacaccttatagagcaagcagttttgtaaaatcactttggaaaatttcactaaaaaaaactaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790077 127 + 3123512 agtagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaatgacttcagtgatcacaccttatagagcaagcagttttgtaaaatcactttggaaaatttcactaaaaaaaactaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510778 127 + 10077455 agaagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaaagacttcagtgatcacaccttatagagcaaacagttttgtaaaatcactttggaaaatttcactaaaaaaaactaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716380 126 + 127223203 acaagaaaatcactgtc-aaattttagcttaacattagttaaggaaacaaaaagacttcagtgatcacaccttataaagcaaacagttttgtaaaatcactttggaaaatttcact-aaaaaaactaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183373 127 - 1799296 agaagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaaagacttcagtgatcacaccttatagagcaaacagttttgtaaaatcactttggaaaatttcactaaaaaaaactaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760255 126 + 6934359 agaagaaaatcactgtc-aaataatagcttaacattagttaaagaaacaaaaagacttcagtgatcacaccttatagagcaaacagttttgtaaaatcactttggaaaatttcact-aaataaattaa i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740798 123 - 18371965 acaaagaaatcactgtcaaaacattagtttaacattagtcaaggaaacaaaaagacttcagtgaacacaccttataaagtaaacagttttgtagaatcagcttggaaaacttcagt-----aaaaaaa i saiBol1.JH378145 C 0 I 5 s cebCap1.NW_016107540v1 1400497 127 + 3566421 acaaagaaatcactgtcaaaacattagcttaacattagttaaggaaacaaaaagatttcagtgaacacaccctataaagtaaacagttttgtataatcagcttggaaaacttcact-aaaaaaaaaaa i cebCap1.NW_016107540v1 I 13 I 5 s aotNan1.NW_018514471v1 1902095 127 - 9267652 acaaagaaatcgctgtcaaaacattagcttaacattagttaaggaaacaaaaagaccttggtgaacacatcctataaagtaaacagttttgtagaatcagcttggaaaacttgact-aaaaaaaaaaa i aotNan1.NW_018514471v1 C 0 I 20 e calJac3.chr8 108121369 2821 - 128169293 I e panTro5.chr2A 90278881 1589 + 111504155 I a score=85788.000000 s hg38.chrUn_KI270746v1 18830 11 + 66486 ccttgag-----aata s panPan2.chr7 108532888 16 - 162613886 ccttaacaatataata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142066 16 + 150013 ccttgagaatataata i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 228275 16 + 1200634 ccttaacagtataata i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133478652 16 - 185818997 ccttaacaatataata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308335 16 + 192294377 ccttaacaatataata i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790204 16 + 3123512 ccttaacaatataata i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510905 16 + 10077455 ccttaacaatataata i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716506 16 + 127223203 ccttaacaatataata i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183500 16 - 1799296 ccttaacaatataata i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760381 16 + 6934359 ccttaacaatatatta i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740926 16 - 18371965 ccttaaaaatacaata i saiBol1.JH378145 I 5 C 0 s cebCap1.NW_016107540v1 1400629 16 + 3566421 ccttaaaaatataaca i cebCap1.NW_016107540v1 I 5 C 0 e aotNan1.NW_018514471v1 1902222 20 - 9267652 I e calJac3.chr8 108121369 2821 - 128169293 I e panTro5.chr2A 90278881 1589 + 111504155 I a score=1711615.000000 s hg38.chrUn_KI270746v1 18841 255 + 66486 agtaaataaaatttaaaaccacaaaacatta--------gtgtgtttgtggg-tgggg----gtctgatttacagagtaaccatatagtaattataatt------attataacgtccagttttc-aaaaaaagttacaaggcatacaaagaatgggaaagtatggctcattcaaaggaacaaaacaaactgacagaaaatatctctaaggaaacccagacttcaaacttactagacaaagactttaaaacaactctcttcattatactcaaatgt s panPan2.chr7 108532904 259 - 162613886 agtaaataaaatttaaaaccacaaaacgtta--------gtgtgtttgtggg-ggggggggtgtctgatttacagagtaaccacatagtaattataatt------ataataatgtccagttttc-aaaaaaagttacaaggcatacaaagaatgggaaagtatggctcattcaaaggaacaaaataaactgacagaaaatatctctaaggaatcccagacatcaaacttactagacaaagactttaaaacaactctcttaattataatcaaatgt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142082 254 + 150013 agtaaataaaatttaaaaccacaaaacatta--------gtgtgtttgtggg-gggg-----gtctgatttacagagtaaccacatagtaattataatt------attataatgtccagttttc-aaaaaaagttacaaggcatacaaagaacgggaaagtatggctcattcaaaggaacaaaacaaactgacagaaaatatctctaaggaaacccagacttcaaacttactagagaaagactttaaaacaactctcttcattatactcaaatgt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 228291 253 + 1200634 agtaaataaaatttaaaaccacaaaacatta--------gtgtgtttgtagg-agggg----gtctgatttacagagtaaccacatagtaattataatt------attataatgcccagttttc-aaaaaaagttataaaacatacaaagaa--ggaaagtatggcttattcaaaggaaaaaaataagttgacagaaaatatgtgtaaggaaatccagacatcaaacgtagtagacaaagactttaaaacaactgttctaatcatattcaaatgt i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133478668 254 - 185818997 agtaaataaaaattaaaat-aaaaaacatca--------gtatgtttgttgg-ggggg----gactgatttacagagtaaccacatagtaattataatt------attataatgtccagttttc-aaaaaaagttacaaagcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctataaggaaacccagacatcaaacttactagacaaagactttataacaactctcttaattatactcaaatgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308351 254 + 192294377 agtaaataaaaattaaaat-aaaaaacatca--------gtatgtttgttgg-ggggg----gactgatttacagagtaaccacatagtaattataatt------attataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctataaggaaacccagacatcaaacttactagacaaagactttataacaactctcttaattatactcaaatgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790220 249 + 3123512 agtaaataaaaattaaaataaaaaaacatta--------gtatgtttgttgg-ggggg----gactgatttacagagtaaccacatag------taatt------attataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctataaggaaacccagacatcaaacttactagacaaagactttataacaactctcttaattatactcagatgt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510921 261 + 10077455 agtaaataaaatttaaaataaaaaaacatta--------gtgtgtttgtggg-gggtg----gtctgatttacagagtaaccacatagtaattataattattataattataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctctaaggaaacccagacatcaaacttactagacaaagactttataacagctctcttaattatactcaaatgt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716522 260 + 127223203 agtaaataaaattttaaatcaagaaacgtta--------gtgtgtttgtagg-gggaga---gtctgatttacagagtaaccacatagtaattataattattataattataacgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaaatatgcctcattcaaaggaacaaaataaattgacagaaaatatctctaaggaaacccagatatcaaacttactagacaaagactttataacaa--ctcttaattatactcaaatgt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183516 261 - 1799296 agtaaataaaatttaaaataaaaaaacatta--------gtgtgtttgtggg-gggtg----gtctgatttacagagtaaccacatagtaattataattattataattataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctctaaggaaacccagacatcaaacttactagacaaagactttataacagctctcttaattatactcaaatgt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760397 258 + 6934359 agtaaataaaatttaaaatcaaaaaatgtta--------gtgtgtttgtggg-ggg------gtctgatttacagagtaaccacatagtaattataattactataattataatgtccagttttc--aaaaaagttacaaggcatacaaagaatgggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatatctaaggaaacccagacatcaaacttactagacaaagactttctaacaactctcttaattatactcaaatgt i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740942 267 - 18371965 agtaaatggaatttaaaatcacaaaatgttagagaatgtgtgtgtttgtagg-gga------gtctgctttaaagagtaaccacatagtaattataattattacaattataatgtgcggctttc-aaaaaaaatcacaaggcatacaaagaatggaaaagtatgggtcattcaaaggaataaaataaatagacataaaatatctctaaggaagcccagacatcaaactgactaggcaaaggttttgaaaccactttctttattatactcaaatgt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1400645 268 + 3566421 agtaaatagaatttaaaaccacaaaatgttagagaatgtgtgtgtttgtagg-ggg------gtctgctttaaagagtaaccacatagtaattataattattataattataacatacagctttcaaaaaaaaatcacaagacatacaaagaatggaaaagtatgggtcattcaaaggaataaaataaatagacataaaatatctctaaggaagcccagacatcaaacttactaggtaaagattttgaaaccactttcttaattatgctcaaatgt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1902242 268 - 9267652 agtaaatagaatttaaaaccacaaaatgttatagaatgtgtatgtttgttggaggg------gtctgctttaaagagtaatcacacagcaattataattcttataattataatgtgcagctttc-aaaaaaaatcacaaggcatacaaagaatggaaaagtatgggtcattcaaaggaataaaataaatagacttaaaatgtctctaaagaagcccagatatgaaacttactaggcaaagattttgaaaccactttcttaattatactcaaatgt i aotNan1.NW_018514471v1 I 20 C 0 e calJac3.chr8 108121369 2821 - 128169293 I e panTro5.chr2A 90278881 1589 + 111504155 I a score=3153037.000000 s hg38.chrUn_KI270746v1 19096 424 + 66486 caaaaggaaaacataaacaaagaaatcaaggaatcac-aaaaaatattaaaaagtaggaatatcaacaaagagataacagaaattctggagtggaaaactacaatgttaataattcaaaaatcaccagagggatttcagagtatatttgc-acacacagaagaagtcatgaacttgaagataagaaaatggaaaatactgactctgagaaacagaaagaataacaaat-aaaaaat-gagcagagactaaggaatctgtgggacatcatcaaatagaccatcattcatattctagaaGGATAAATTATGTTGTTGAAAACTTTACCAT--tctttc-ttttcacctttctttcttcctccctccccctcctccacctttttacttttcttcctcttcctttc---tcttctttctctccttcattatccctttc s panPan2.chr7 108533163 425 - 162613886 caaaaggaaaacataaatgaagaaataaaggaatcagaaaaaaatgttaaaaagtaagaatatcaacaaagagataac--aatttctggagttgaaaactacagtgataaaaattttaaaatcaccagagggatttaagagtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgagaaatagaaaaaataacaaat-aaaaaat-gaacagagactaaggaatctgtgggacaacatcaaatagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACTTTACCAT--tctttc-ttttcacctttctttcttcctccctccccct-ctcctcctttttatttttcttcctcttcctttctcttcttctttctctccttcattatccctttc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142336 423 + 150013 caaaaggaaaacataaacaaagaaataaaggaatcag-aaaaaatattaaaaagcaggaatatcaacaaagagataacagaaattctggagtggaaaactacaatgataataattcaaaaatcaccagagggatttcagagtatatttgc-acacacagaagaagtcatgaacttgaagataagaaaatggaaaatactgactctgagaaacagaaagaatatcaaat-aaaaaat-gagcagagactaaggaatctgtgggacatcatcaaatagaccaacattcatattctagaaGGATAAATTATGTTGTTGAAAACTTTAGCAt--tctttc-ttttcacctttctttcttcctccctccccctcctacacctttttacttttcttcctcttcctttc---tcttc-ttctctccttcattatccctttc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 228544 422 + 1200634 caaaaggaaaacata----aagacataaaggaatcag-gaaaaatattaaaaagtaggaatatcaacaaagagataacagaaattgtggagcgaaaaa-tacaatgataaaaattaaaaaatcaccagagggatctaagagtatatttgc-acacacagaataagtcatgagcttgaagataagaaaatggaaaatattgactctgagaaacagaaagaataacaaat-aaaaaat-gagcagagactaaggaatctgtgggacatcatcaaatagactaacattcatattccagaaggacaaATTATGTTGTTAAAAACTTTACCAT--tctttc-ttttcacctttctttcttcctccctccccctcctcctcctttttacttttcttcctcttcctttctcttcttctttctctccctcattatccctctc i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133478922 426 - 185818997 caaaaggaaaacataaacaaagaaataaaggaattag--aaaaatatgaaaaagtaagaatatcaagaaagagat-acagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccagagggattcaagagtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgacaaacagaaagaataacacat-aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACTTTACCAT--TCTTTCTTTTTCACCTTTCTCTCTTCCTCCCTCTCCTCCTTCCTCCttcttactttttttcctcttcctttctcttcttctttctctccttcattatccctttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308605 426 + 192294377 caaaaggaaaacataaacaaagaaataaaggaattag--aaaaatatgaaaaagtaagaatatcaagaaagagat-acagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccagagggattcaagagtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgacaaacagaaagaataacacat-aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACTTTACCAT--TCTTTCTTTTTCACCTTTCTctcttcctccctctcctccttcctccttcttactttttttcctcttcctttctcttcttctttctctcctTCATTATCCCTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790469 425 + 3123512 caaaaggaaaacataaacaaagaaataaaggaattag--aaaaatatgaaaaagtaagaatatcaagaaagagat-acagtaattctagaactgaaaacaacaataataaaaattttaaaatcaccagagggattcaagagtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgacaaacagaaagaataacacat-aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACTTTACCAt--tctttc-ttttcacctttctctcttcctccctctcctccttcctccttctttctttttttcctcttcctttctcttcttctttctctccttcattatccctttt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511182 424 + 10077455 caaaaggaaaacataaacaaagaaataaaggaattac--aaaaatatgaaaaagtaagaatatcaagaaagagat-acagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccaaagggattcaagagtatatttgc-acacacagaagaagccatgagcttgaagataagaaaatggaaaatattga--ctgagaaacagaaagaataacacataaaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagcccaacattcatattCTAAAAGGATAAATTACGTTGTTAAAAACTTTACCAT--tctttc-ttttcacctttctttcttcctccctctccctcgtcctccttctttcttttcttcctcttcctttctcttcttctttctctccttcattatccctttt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716782 422 + 127223203 caaaaggaaaacataaacaaagaaataaaggaattag--aaaaatatgaaaaagtaagaatatcaagaaagagat-acagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccagagggattcaagagtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgagaaacagaaagaatagcacat-aaaaaaa-gaacagagactaaggaatctgtgggatatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTATTAAAAACTTTACCAT--tctttc-ttttcacctttctttcttcttccctctccctagtcctcctca---cttttcttcctcttcctttctcttcttctttctctctttcattatccctttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183777 424 - 1799296 caaaaggaaaacataaacaaagaaataaaggaattag--aaaaatatgaaaaagtaagaatatcaagaaagagat-acagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccaaagggattcaagagtatatttgc-acacacagaagaagccatgagcttgaagataagaaaatggaaaatattga--ctgagaaacagaaagaataacacat-aaaaaaatgaacagagactaaggaatctgtgggacatcatcaaaaagcccaacattcatattCTAAAAGGATAAATTACGTTGTTAAAAACTTTACCAt--tctttc-ttttcacctttctttcttcctccctctccctcgtcctccttctttcttttcttcctcttcctttctcttcttctttctctccttcattatccctttt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760655 422 + 6934359 caaaaggaaaacataaacaaagaaataaaggaattag--aaaaatatgaaaaagtaagaatatcaagaaagagat-acagtaattctagaactgaaaacaacaatgatacaaatttaaaaatcaccagagggattcaagagtatatttgc-acaggcagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgagaaacagaaagaataatacataaaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATCAATTATGTTGTTAAAAACTTTACCAT--tctttg-ttttcacctt----tcttcctccctctccctcgtcctccttcttatttttcttcctcttcctttctcttcttctttctctccttcattatccctttt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124190 414 - 128169293 caagagggaaactccatctcaaaaaaaaa-----aaaaaaaaaatacggaaaactaagaatatcaacaaagagat-acagaaattctggagctgaaaaatacaatgccaaaaataaaaaattcaccagagggactcaagagtctatttgtgacacag---aaaagtcatgagcttgaagataagaaaatagaaaatactgactctgagaaacagaaagaataacaaat-aaaaaat-gaacagagactatggaatctgtgggacatcaagaaatagaccaacatTCAAATTCAAAACCAATAAATTCTGTTGTTAAAAACTTTAACATTCTTTTTT-TTATCACctttctttcttcctctatctc---cctcctcttccttaattttcttcctcttcctttc---tcttctttctctccctcattatcc--ctc i calJac3.chr8 I 2821 C 0 s saiBol1.JH378145 741209 409 - 18371965 ctaaagaaaaacataaacaaagaaaggaa----tcagaaaaaaatatgaaagagtaagaatatcaacaaagagat-acagaaattctggagctgaaaactacaatgacaaaaataaaaaatgcaccagagggattcaagagtctatttgcaacccac---agaagtcatgagcttgaagat-----aatagaaaatattga--ccgagaaacagaaagaataacaaat--aaaaat-gaacagagactgaagaatctgtggcacattaggaaacagaccaacattcatattCAAAAATGCAAAATTCTATTGTTAAAAACTTTAACAG--TTATTG-TTATCACCCTTCTTTCTTCCTCCATCCC-CTCCTCTTCCTTCTTAATTTTCTTCCtcttcctttc---tcttctttctctccttcattatccctctc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1400913 422 + 3566421 ctaaagaaaaacataaacaaagaaataaaggaatcagaaaaaaatatgaaagagtacgaatatcaacaaagagat-acagaaattttggagctgaaaactacaatgacaaaactaaaaaatgcaccagagggattcaagagtctatttgcgacccacagaagaagtaatgagattgaagataagaaaataggaaatatcga--ctgaaaaacagaaagaaaaacaaat-aaaaaat-gaacagagactgaggaatctgtggcacatcaagaaatagaccaacattcatattCAAAAATGAAAAATTATATTGTTAAAAACTTTAACA---TTCTTT-TTATCACCTTTCTTtcttcctccatccccctcctcttccttcttaattttcttcctcttcctttc---tcttctttctccccttcattatccctctc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1902510 421 - 9267652 ctaaagaaaaacataaacaaagaaataaaggaatc--aaaaaaatatggaagactaagaatatcaacaaagagat-acagaaattctggagctgaaaactacaatgacaaaaataaaaagctcaccagagggattcaagagtctatttgcgacacag--aagaagtcatgagcttgaagataagaaaatagaaaatattgactctgagaaacagaaagaataacaaat-aaaatat-gaagagagactaaggaatctgtgggatatcaagaagtagaccaacattcatattCAAAAACAATAAATTCTATTGTTAAAAACTTTAACAt--tctttt-ttatcatctttctttcttcctccatcttcctcctcttccttcttaattttcttcctcttcctttc---tcttctttctctccttcattatccctctc i aotNan1.NW_018514471v1 C 0 I 22 e panTro5.chr2A 90278881 1589 + 111504155 I a score=116171.000000 s hg38.chrUn_KI270746v1 19520 22 + 66486 gctctgtttctccttctccctc-- s panPan2.chr7 108533588 22 - 162613886 actctgtttctctctctccctc-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142759 22 + 150013 gctctgtttctctttctccctt-- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 228966 22 + 1200634 actctgtttctctttctcCCGT-- i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133479348 22 - 185818997 gctctgtttctctctccctccc-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309031 22 + 192294377 GCTCTGTTTCTCTCTCCCTCCC-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790894 22 + 3123512 gctctgtttctctctccctccc-- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511606 22 + 10077455 gctccgtttctctctctctccc-- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717204 22 + 127223203 gctccgtttctctctctctccc-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184201 22 - 1799296 gctccgtttctctctctctccc-- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761077 22 + 6934359 gctctgtttctctgtctctccc-- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124604 22 - 128169293 --tctgtttttttctttccctttc i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 741618 22 - 18371965 --tctgtttttttctttctctttc i saiBol1.JH378145 C 0 I 3 s cebCap1.NW_016107540v1 1401335 22 + 3566421 --tctgtttttttctttccctttc i cebCap1.NW_016107540v1 C 0 I 3 e aotNan1.NW_018514471v1 1902931 22 - 9267652 I e panTro5.chr2A 90278881 1589 + 111504155 I a score=3267838.000000 s hg38.chrUn_KI270746v1 19542 417 + 66486 ttttt------tcttttctttcaattttctcaattactaagagatgtttaaatacccttaccatgttagtagatatggttatt-tctccctttagttctCTTTTGAGATTTATAGTC-ACTCTAAGTAAAGAGATAACCCAAACATAAGCCTCACAAACAGGCTTGCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-ATGTTTTAT-AACAAATTGTTTAGTTTTCTCCAACGGAATGTTTATTCTGAGTTATCTAATTCATATTGTAAGTATATAGGGAGTTTAATATAAAATTATTAAACTAATATTTGTGAAAGAATGTATTTGTGCATTTAACAAATATGTTAATCCTCAAACAGTTATTGGGCAGCTGAACATACAGCAATAAAAAT s panPan2.chr7 108533610 415 - 162613886 tTTTT--------TTTGCTTTCAATTTTCTCAATTACTAAGAGATGTTTAAATACCCTTACTGTGTTAGTAGATATGGTTATT-TATCCCTTTAGTTCTCTTTTGAGATTGATAGTC-ACTCTAAGTAAAGAGATAATCCAAAAATAAGCCTCACAAACAGGCTTCCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-ATGTTTTAT-AACAAATTGTTTACTTTATTCCAATGCAATGTTTATTCTGAATTATCTAATTCATATTGTAAGTATATAGGGAGTTTAATACAAAATTATTCAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATGTTAATCCTCAAACTGTTATTGGGCAGCTGAGCATACAGCAATAAAAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142781 419 + 150013 tcttt----tgtcttttctttcaattttctCAATTACTAAGAGATGTTTAAATACCCTTACCATGTTAGTAGATATGGTTATT-TCTCCCTTTAGTTCTCTTTTGAAATTTATAGTC-ACTCTAAGTAAAGAGATAACCCAAACATAAGCGTCACAAACAGGCTTGCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-ATCTTTTAT-AACAAATTGTTTAGTTTTCTCCAACGGAATGTTTCATCTGAGTTATCTAATTCATATTGTAAGTATATAGGGAGTTTAATATAAAATTATTAAACTAATATTTGTGAAAGAATGTATTTGTGCATTTAACAAATATGTTAATCCTCAAACAGTTATTGGGCAGCTGAACATACAGCAATAAAAAC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 228988 416 + 1200634 TCTTT-------CTTTTCTTTCAATTTTCTCAATTACTAAGAGATGTTTAAATACCCTTACCATGTTAGTAGATGTGGTTATT-TCTCCCTTTAGTTCTCTTTTGAGATTTATAGTC-ACTCTAAGTAAAGAGATAACCCAAACATAAGCCTTACAAACAGGCTTCCATACCATTCTTAATTTGG---TCTTGTAATTCGTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-ATGTTTTAT-AACAAATTGTTTAGTTTTTTCCAATGGAATGTTTATTCCGAATTATCTAATTAATATTGTAAGTATATACAGAGTTTAATATAAAATTATTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATGTTAATCCTCAAACTGTTATTGGGCAGCTGATCATACAGCAATAAAAAT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133479370 424 - 185818997 tttctcttttttcttttctttCAATTTTCTCAATTACTAAGAGATGTTTAAATACCCTTACCGTGTTAGTAGATATAGTTATT-TCTCCCTTCATTTCTCTTTTGAGATTTATCATC-ACTTTAAGTATAGAGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TTCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-CTTTTTTTTAAACAAATTGTTTAGTTTTTTCCAATGGAATGTTTATTCTGAATTATCTAATTCACATTTTAAGTATATAGGGAGTTTAATATAAAAATTTTAAACTGATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309053 424 + 192294377 TTTCTCTTTTTTCTTTTCTTTCAATTTTCTCAATTACTAAGAGATGTTTAAATACCCTTACCGTGTTAGTAGATATAGTTATT-TCTCCCTTCATTTCTCTTTTGAGATTTATCATC-ACTTTAAGTATAGAGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TTCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-CTTTTTTTTAAACAAATTGTTTAGTTTTTTCCAATGGAATGTTTATTCTGAATTATCTAATTCACATTTTAAGTATATAGGGAGTTTAATATAAAAATTTTAAACTGATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790916 424 + 3123512 tttctcttttttcttttctttcaattttctCAATTACTAAGAGATGTTTAAATACCCTTACCGTGTTAGTAGATATAGTTATT-TCTCCCTTCATTTCTCTTTTGAGATTTATCATC-ACTTTAAGTATAGAGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCCTTCTTAATTTGG---TTCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-CTTTTTTTTAAACAAATTGTTTAGTTTTTTCCAATGGAATGTTTATTATGAATTATCTAATTCACATTTTAAGTATATAGGGAGTTTAATATAAAATTTTTAAACTGATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511628 425 + 10077455 tttctcttttttcttttctttcaattttctCAATTACTAAGAAATGTTTAAATACCCTTACCATGTTAGTAGATATAGTTATT-TCTCCCTTCAGTTCTCTTTTGAGATTTATAGTC-ACTTTAAGTATAAAGATAACCCAAACATATGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGGATTTTTTTTTTAACAAATTGTTTAGTTTTATCCAATGGAATATTTATTCTGAATTATCTAATTCATATTTTAAGTATATAGGGAGTTTAATATAAAAATTTTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717226 423 + 127223203 tttctcttttttcttttctttcaattttctCAATTACTAAAAAATATTTAAATACCCTTACCATGTTAGTAGATATAGTTATT-TCTCCCTTCAGTTCTCTTTTGAGATTTATAGTC-ACTTTAAGTATAAAGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATGGCTGTATTAACTTTCTGATGCTTTTAAGG-ATTTTTTTT-AACAAATTGTTTAGTTTTATCCAATGGAATATTTATTCTGAATTATCTAATTCATATTTTAAGTATATAGGGAGTTTAATATAAAATTTTTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184223 424 - 1799296 tttctcttttttcttttctttcaattttctCAATTACTAAGAAATGTTTACATACCCTTACCATGTTAGTAGATATAGTTATT-TCTCCCATCAGTTCTCTTTTGAGATTTATAGTC-ACTTTAAGTATAAAGATAACCCAAACATATGGCTCACAAACAGACTTCCAAACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-ATTTTTTTTAAACAAATTGTTTAGTTTTATCCAATGGAATATTTATTCTGAATTATCTAATTCATGTTTTAAGTATATAGGGAGTTTAATATAAAAATTTTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761099 423 + 6934359 tttctcttttttcttttctttcaattttctCAATTACTAAGAGATGTTTAAATACCCTTACTGTGTTGGTAGATATGGTTATT-TCTCCCTTCAGTTCTCTTTTGAGATTCATAGTC-ACTTTAAGTATAGAGATAACCCAAGCATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTCGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-A-TTTTTTTAAACAAATTGTTTAGCTTTTTCCAATGGAATGTTTATTCTGAATTATCTAATTCATATTTTCAGTATATAGGGAGTTTAATATAAAATTTTTAAACTAATATTTGTGAAAGAGTGTATTTGTTCATTTAACAAATATATTAATCCTCTAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124629 421 - 128169293 ------ttttttctttACTTTAAATTTTCTCAATATCTAAGAGATGTTTAAATACTTTTACTGTGTTAGTAGATACGGTTTTTCTCTGTCTTCAGGTCCCTTTTGAGATTGATACTCAACTCTGAGTAAAGAGATAACCCAAATATAAGAATCATAAACAGACGTCCATACCATTCTTAATCTTGTAATTCTTCATTGCTTCACTGTTCTATTAACATTCTGATGC-TTTAAGA-ATGTTTTAT-AAAATATTGCTTAGTTTTTTCCAATAGAATGTTTATTCTGAATTATCTAATTCATATTGCAAGTATTTAGGGAGTTTAATATAAAATTATGAAACTAATACTTGTGAAAGAGTGCATTTGTCCATTTTACAAATATGTTAATCCTCAAACTGTTATTGGGCAGCTGAGTATATAGCAAAAAAAAA i calJac3.chr8 I 3 I 4 s saiBol1.JH378145 741643 420 - 18371965 ------tttattctttactttcAGTTTTCGCAATTACTAAGAGATGTTTAAATACTTTTACTGTGTTAGTAGATACGGTTATT-TCTCTCTTTAGGTCCTTTTTGTGATTGATACTCAACTCTGAGTAAAGAAATAATCCAAATGTAAGAATCATAAACAGGCTTCCATTCCATTCTTAATCTTGTAATTCTTCATTGCTTCATTGTTGTGTTAACTTTCTGATGC-TTTAAGA-ATGTTTTAT-AAAATATTTCTTAGTTTATCCCAAAAGAATGTTTATTCTGAATTATCTAATTCATATTGCAAGTATATAGGGAGTTTAATATAAAATTATTAAACTAATACTTGTGAAAGAGTGTATTTGTCCATTTTACAAATATGTTAATCCTCAAACTGTTATTGGGCAGCTGAGCATACAGTaaaaaaaaa i saiBol1.JH378145 I 3 I 4 s cebCap1.NW_016107540v1 1401360 418 + 3566421 ------tttattctttactttcaatttTCTCAATTACTAAGAGATGTTTAAATACTTTTAC--TGTTAGTAGATATGGTTATT-TCTCTCTTTAGGTCCCTTTTGTGATTGATACTCAACTCTGAGTAAAGAGATAATCCAAATATAAGAATCATAAACAGGCTTCCATACCATTCTTAATCTTGTAATTCTTTGTTGCTTCATTGTTGTATTAACTTTCTGATGC-TTTAAGA-ATGTTTTAT-AGAATATTTCTTAGTTTTTTCCAATAGAATGTTTATTCTGAATTATCTAATTCATATTGCAAGCATATAGGGAGTTAAATATAAAATTATTAAACTAATAATTGTGAAAGAATGTATTTGTCCATTTTACAAATATGTTAATCCTCAATCTGTTATTGGGCAGCTGAGCATACAGCAAAAAAAAC i cebCap1.NW_016107540v1 I 3 I 59 s aotNan1.NW_018514471v1 1902953 420 - 9267652 ------ttttttctttactttcaattttctCAATTGCTAAGAGATGTTTAAATACTTTTACTGTGTTAGCAGATATGATTATT-TCTCTCTTCAGGTCCCTTTTGAGATTGATACTCAACTCTGAGTAAAGAGACAACCCAAATATAAGAATCATAAACAGGCTTCCATATCATTCTTAATCTTGTAATTCTTCATTGCTTCATTGTTGTATTAACTTTCTGATGC-TTTAAGA-ATGTTTTAT-AAAATATTGCTTAGTTTTTTCCAATAGAATGTTTATTCTGAGTTATCTAATTCATATTACAAGTATATAGGGAGTTTAATATAAAATTATTAAACTAATACTTGTGAAAGAGTGTATTTGCCCATTTTACAAATATGCTAATCCTCAAACTGTTATTGGGCAGCTGAGCATACAGCaaaaaaaaa i aotNan1.NW_018514471v1 I 22 I 4 e panTro5.chr2A 90278881 1589 + 111504155 I a score=248762.000000 s hg38.chrUn_KI270746v1 19959 57 + 66486 A----------------ACATAATTTTTATGTGTACAATATTTATGGAATAAACTACTGGAACCAATAAATAC s panPan2.chr7 108534025 57 - 162613886 A----------------ACATAATTTTTATGTGTACAATATTTATGGAATACATTATTGAAACAAATAAATAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 143200 57 + 150013 A----------------ACATAATTTTTATGTGTACAATATTTATGGAATAAATTACTGGAACCAATAAATAC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 229404 57 + 1200634 A----------------ACATAATTTTTATGTGTACAATATTTATGGAATACATTCCTAAAACAAATAAATAA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133479794 51 - 185818997 A----------------ACATAATTTTTATGTGTACAA-ATTTATGTaataaat-----aaatgaataattta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309477 56 + 192294377 A----------------ACATAATTTTTATGTGTACAA-ATTTATGTaataaattactgaaatgaataattta i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2791340 56 + 3123512 A----------------ACATAATTTTTATGTGTACAA-ATTTATGTaataaattactgaaatgaataattta i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2512053 56 + 10077455 A----------------ACATAATTTTTATGTGTACAA-ATTTATGGaataaattactgaaatgaataattta i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717649 56 + 127223203 A----------------ACATAATTTTTATGTGTACAA-ATTTATGGaataaattactgaaatgaataattta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184647 56 - 1799296 A----------------ACATAATTTTTATGTGTACAA-ATTTATGGAATAAATTACTGAAATGAATAATTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761522 54 + 6934359 A----------------AC--AATTTTTATGTGTACAA-ATTTGTAGaataaattactgaaatgaataattta i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108125054 53 - 128169293 A----------------ACCTAAATTTTATATGCACAATATGTATGGAATATATTACAGAAACAAATAA---- i calJac3.chr8 I 4 C 0 s saiBol1.JH378145 742067 66 - 18371965 aaaaaaaaaaaaaaaaCACCTAATTTTTATATGCACAATATGTACGGAATATATACC---AATAAATAA---- i saiBol1.JH378145 I 4 C 0 s aotNan1.NW_018514471v1 1903377 50 - 9267652 aaaaaaaa---------CCCTAATTTTTAT-------ATATGTGTGGAATATATATC---AATAAATAA---- i aotNan1.NW_018514471v1 I 4 C 0 e cebCap1.NW_016107540v1 1401778 59 + 3566421 I e panTro5.chr2A 90278881 1589 + 111504155 I a score=22245.000000 s hg38.chrUn_KI270746v1 20016 7 + 66486 TT--TAGTT s panTro5.chr2A 90280470 7 + 111504155 TT--TAGTT i panTro5.chr2A I 1589 C 0 s panPan2.chr7 108534082 7 - 162613886 TT--TAGTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 143257 7 + 150013 TT--TAGTT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 229461 7 + 1200634 TT--TAGTT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133479845 7 - 185818997 gt--taata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309533 7 + 192294377 gt--taata i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2791396 7 + 3123512 gt--taata i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2512109 7 + 10077455 gt--taata i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717705 7 + 127223203 gt--taata i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184703 7 - 1799296 GT--TAATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761576 7 + 6934359 gt--taata i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108125107 9 - 128169293 TCAATAAAT i calJac3.chr8 C 0 I 4 s saiBol1.JH378145 742133 7 - 18371965 TT--TACTT i saiBol1.JH378145 C 0 I 4 s aotNan1.NW_018514471v1 1903427 7 - 9267652 TT--TACTT i aotNan1.NW_018514471v1 C 0 I 4 e cebCap1.NW_016107540v1 1401778 59 + 3566421 I a score=6577780.000000 s hg38.chrUn_KI270746v1 20023 703 + 66486 AATAACATGACCAAGAACAGAAATTGTATACACTATACAGCATAGTAATGGAATAATGAGTGATTAAAGTTATTAATACTAGGTAGAAAATGAAGG-TATCTTTGAGAGCAGAACTCAAGGAAGC--------------AAGCAATTCGCCTTATG-AGGAAAGAGTCACCTGTGGATAAAGGAGAAACTGAAAAATTTACAAGTCAAGACTTTTTGAGCAAAAACAAAAATATGACTATTAGTCACCAATTCAGTACAGT-GAAAAGAAAGTTGAAGAGATATCTTGGAAGTAAACCATGTTGTGGAagagcatgtagggttttgataatcttgggatgattctgaattaattttaaatgcgataggaatatatgagataatttcaccagagaataacatgattgtgtttgcatttcaaaggggtgtatctcgtgcactgtgaagaataaa-----taggttatgtgagcaaataaatttggaggctattgtaat-ccacagaaaataggtagtgacttaggtgagaatgctgtgagtatgagtggtattagtggtgagaagtcgtcaggccatggatgtatatcagaggactggccaagagaactgcagctaaattggagtgtagggagtgaaatggagaactcaaagatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-AGGCTGATCCCTCTTATTAAGAGAGTTACTTGGGAA s panTro5.chr2A 90280477 704 + 111504155 AATAACATGACAAAGAACAGAAATTGTATACACTATAGAGCATAGTAATGGAATAATGAATGATTAAAGTTATTAATATTAGGTAGAAAATGAAGGGTATCTTTGAGAGCAGAACTCAAGGAAGC--------------AAGCAATTCGCCTTATG-AGGAAAGAGTTACCTGTGGATAAAGGAGAAACTGAAAAATTTACAAGTAAAGACTTTTTGAGCAAAAGCAAAAATATGACTATTAGTCACCAATTCAGTAGAGT-GAAAAAAAAGTTGAAGAGATATCTTGGAAGTAAACCATGTTGTGGAagagcatgtagggttttgataatcatgggatgattctgaattaattttaaatgtgataggaatatatgagataatttcaccagagaataacatgattgtgtttgcatttcaaaggggtgtatctggtgcactgtgtagaataaa-----taggttatgtgagcaaataaattgggaggctactctaat-ccagagaaaaaaggtagtgacttaggtgagaatgctgtcaggatgagtggtagtagtggtgagaagtcgttaggccatggatgtatttcataagactggccaagagaactgcagctaaattggagtgtagggagtgaaatggaggactcaaagatgactctcagCACTGGAAAGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAAGAGAGTTACTTGGGAA i panTro5.chr2A C 0 C 0 s panPan2.chr7 108534089 702 - 162613886 AATAACATGACAAAGAACAGAAATTGTATACACTATAGAGCATAGTAATGGAATAATGAATGACTAAAGTTATTAATATTAGGTAGAAAATGAAGGATATCTTTGAGAGCAGAACTCAAGGAAGC--------------AAGCAATTAGCCTTATG-AGGAAAGAGTTACCTGTGGATAAAGGAGAAACTGAAAAATTTACAAGTCAAGACTTTTTGAGCGAAAACAAAAATATGACTATTACTCACCAATTCTGTACAGT-GAAAAAAAAGTTGAAGAGATATCTTGGAACTAAACCATGTTGTAGAagagcatgtagggttttgataatcatgggattattttgaattaattttaaatgcaataggaatatatgagataatttcaccagagaataacatgattgtgtttgcatttcaaaggggtgtatttggtgcaccgtgtagaataaa-----taggttatgtgggcaaataaattggggggctattgtaat-ccagagaaaaaaggtagtgactaaagtgagaatgctgttagtatgagtggtattagtggtgagaattcgttaggccatggatgtatttcatagaactggccaagagaactgcagctaaattggagtgtagggagtgaaatggagaactcaaagatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatga--cttattaagagagttacttgggaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 143264 705 + 150013 AATAACATGAC-AAGAACAGAAATTGTATACACTATAGAGCATAGTAATGGAATAATGAGTGATTAAAGTTATTAATATTAGGTAGAAAATGAAGGGTATCTTTGAGAGCAGAACTCAAGGAAGC--------------AAGCAATTCGCCTTATGAAAAAAAGAGTTACCTGTGGATAAAGGAGAAACTGAAAAATTTACAAGTCAAGACTTTTTGAGCAAAAACAAAAATATGACTATTAGTCACCAATTCAGTACAGTGGAAAAAAAAGTTGAAGAGATATCTTGGAAGTAAACCATGCTGTGGAagagcatgtagggttttgataatcatgggatgattctgaattaattttaaatgcgataggaatatatgagataatttcaccagagaataacatgactgtgtttgcatttcaaaggggtgtatctcgtgcactgtgaagaataaa-----taggttatgtgagcaaataaattgggaggctattgtaat-ccacagaaaataggtagtgacttaggtgagaatgctatgagtatgagtggtattagtggtgagaagtcgtcaggccatggatgtatttcagaggactggccaagagaactgcagctaaattggagtgtagggagtgaaatggagaactcaaagatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAAGAGAGTTACTTGGGAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 229468 704 + 1200634 AATAACATGACAAAGAACAGAAATTGTATACACTATAGAGCATAGTAATGGAATAATGAATGATTAAATTTATTAATATTAGGTAGAAAATGAAGGGTATCTTTGAGAGCAGAACTCAAGGAAGC--------------AAGCAATTAGCCTTATG-AGGAAAAAGTTACCTGTGGATAAAGGAGAAACTGAAAAATTTACAAGTCAAGACTTTTTGAGCAAAAACAAAAATATGACTATTAGTCACCAATTCAGTTCAGT-GAAAAAAAAGTTGAAGAGATATCTTGGAAATAAACCATGTTGTGGAagagcatgtagggttttgataatcatgggattattctgaattaattttaaatgcgataggaatatatgagattatttcaccagagaataacatgattgtgtttgcacttcaaaggggtatatctggtgcactgtgtagaataaa-----taggttttgtgagcaaataaatcgggaggttattgtaat-ccagagaaaaaatgtagtgacttaggtgagaatgctgttagtatgaatggtattagtgatgagaagtcattaggccatggatgtatttcataggactggccaaaagaactgcagctaaattggagtgtagggagtgaaatggagaactcaaagatgactGTCAGCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCTTCTTATTAAGAGAGTTACTTGGGAA i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133479852 701 - 185818997 aataaCATGACAAAGAACAGAAATTGTATACACTATAGAACACAGTAATAGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAAGAATCTTTGAGAGCAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAGTTACCTGTGGATAAAGGAGAAACTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgattatcatgggattattttgaatcaattttaaatgcaataggaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcaaagggatatatatggtacactgtaaagaataaa-----tatgttatgtgggcaaacaaattgggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagtcgttaggtcatggatgtatttcgtaggactggccaagagaactgcagctaaattggagtgtagggagtgaaatggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309540 701 + 192294377 aataaCATGACAAAGAACAGAAATTGTATACACTATAGAACACAGTAATAGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAAGAATCTTTGAGAGCAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAGTTACCTGTGGATAAAGGAGAAACTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatgggattattttgaatcaattttaaatgcaataagaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaagggatatatatggtacactgtaaagaataaa-----tatggtatgtgggcaaacaaattgggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagtcgttaggtcatggatgtatttcgtaggactggccaagagaactgcagctaaattggagtgtagggagtgaaatggagaactcaaggatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAGGAGAATTACTTGGGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2791403 701 + 3123512 aataaCATGACAAAGAACAGAAATTGTATACACTATAGAACACAGTAATAGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAAGAATCTTTGAGAGCAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAGTTACCTGTGGATAAAGGAGAAACTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatgggattattttgaatcaattttaaatgcaataggaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaagggatatatatggtacactgtaaagaataaa-----tatgttatgtgggcaaacaaattgggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagtcgttaggtcatggatgtatttcgtaggactggccaagagaactgcagctaaattggagtgtagggagtgaaatggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2512116 701 + 10077455 aataacatgacaaagaacagaaataGTATACATTATAGAACACAGTAATGGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAGGGATCTTTGAGAGCAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAGTTACCTGTGGATAAAGGAGAAACTGAAAAATATATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTATAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatggcattattttgaatcaattttaaatgcaataggaatacgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaagggttatatatggtacactgtaaagaataaa-----tacgttatgtgggcaaacaaatttgaaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagttgttaggtcatggatgtatttcataggactggccaagagaactgcagctaaattggagtgtagggagtgaaatggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717712 701 + 127223203 aataaCATGACAAAGAACAGAAATTGTATGCACTATAGAACACAGTAATGGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAGGGATCTTTGAGAACAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTAAG-AAGAAAGAGTTACCTGTGGATAAAGAAGAAACTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAAGAGTATGTAGGGTTTTGATAATCATGGGATCATTTTGAATCAATTTTAAATGCAATAGGAATATGTGAGATAATTTCACCAGAGAATAACATGATTGTGTTTGCATTTCGAAGGTGTATATACGGTACACTGTAAAGAATAAA-----TACGTTATgtgggcaaacaaatttggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtgggatgagtggtgagaagttgttaggtcatggatgtatttcataggactggccgagagaactgcagctaaattggagtgtagggagtgaaatggagaactcagggatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAGGAGAATTACTTGGGAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184710 701 - 1799296 AATAACATGACAAAGAACAGAAATTGTATACATTATAGAACACAGTAATGGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAGGGATCTTTGAGAGCAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAGTTACCTGTGGATAAAGGAGAAACTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTATAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatgggattattttgaatcaattttaaatgcaataggaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaaggggtatatatggtacactgtaaagaataaa-----tacgttatgtgggcaaacaaatttggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagttgttaggtcatggatgtatttcataggactggccaagagaactgcagctaaattggagtgtagggagtgaaatggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761583 705 + 6934359 aataacatgacaaagaacataaatTGTATACACTCTAGAACACAGTAATGGAATAATGAATGATTAAATTTATTAATATTAGATAGAAAATGAAAGGGATCTTTGAGAGCAGACTTCAAAGAAAC--------------AATGAATTACCCTTATG-AGGAAAGAGTTACCAGTGGATAAAGGAGAAACTGAAAAATGTATAAATGAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGCGCTATCTTGGAACTAAACCATGCTATacaagagtatgtagggttttgataatcatgggattattctgaatcaattttaaatgtgataggaatatgtgagataatttcaccagagaatagcatgattgtgtttgcatttcgaaggggtatatatggtatgttgtgaagaataaa-----tatgttacgtgggcaaacaaattgggagactattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttagtatgagtggtatgagtcgtaagaagtcgttaggtcatggatgtatttcataggactggccaagagaactgcagctaaattggagtgtagggagtgaaatggagaactcaaggatgactctcagcactggaaggtgacagctgtcagtgaagc-atgctgatgcctcttattaggagaattacttgggaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108125120 718 - 128169293 AATAACATCACAAAGAACAGAAATTATATACACCACAGAGCATAGTAATGGAATAATGAATGATTAAAGTTATTAATTTTGGATAGAAAATGAAGGGGATATTTGAGAATAGACCTCAAGGAAGCAAGCTTTCCTCATAAAGGAATTAGATTTATG-AGGAAAGACTGACCTGTGAATAAAGGAGAAACTGAAAAATTTATATGGCAAGACTTTTTGAGCAAAAAG-AAAATATGACTATTACTCATCAATGCACTACAGT-GAATAAAAAGTTGAAGACATATCTTGGAATTAAACCATGTTAgataagagcatgtagggttttgataatcatgaaattattttgaattaatttaaaatgcgataggaatacatgagataatttcaccacagaataacatgattgtgtttgcacttcaaaggggtatatctggtgcactgtggagaataaa-----taggttaagtgcacaaataaattaagaggctattgtagt-ccagagaaaaaaggttgtggcttagatgagaatgctgttaatgtaagtggtatgagtggtgagaagtggttaggccatggatgtatttcaaaggactggccaagagaactgcagctaaatcagagtgtagggagtaaaatggagaaagcaaaggtgactctcagCACTGGAATATGGCAGCTGTCACTGAAGCAACGCTGATGCCTCTTAATACGAGGGTTACTTGGGGA i calJac3.chr8 I 4 I 1 s saiBol1.JH378145 742144 703 - 18371965 AATAACATCACAAAGAACAGAAATTGTATACACTACAGAGCATAGTAATGGAATTATGAATGATTAAAGTTATTAATTTTAGATAGAAAATGAAGGGGATCTTTGAGAGTAGACCTCAAGGAAGC--------------AAGGAATTAGCCTTATG-AGGAAAGAGTTACCTGTGAATAAAGGAGAAACTGAAAAATTCATATGTCAAGACTTTCTGAGCAAAAAGAAAAATATGACTATTACTCACCAATGCACTACAAT-TAATAAAAAGTTGAAGACATATCTTGGAATTAAACCATGCTGGGTAagagcatgtagggttttggtaatcatggaattattttgaattaattttaaatgtaataggaatacatgagataatttcaccagaaaatgatatgattgcgtttgcatttcaaaggggtatatctggtgcactgtggagaataaa-----tagattaagtgcacaaataaattaagaggctattgtagt-ccagagaaaaaaggttgtggcttagatgagaatgctgttaatataagtggcatgagtggtgagaagtggttaggccatggatatatttcagaggactagccaaaagaactgcagctaaatccgagtgtagggagtaaaatggagaacgtgaagat--cactcagcaatggaaggtggcagctgtcactgaAGCAATGCTGATGCCTCTTATTACGAGGGTTACTTGGGGA i saiBol1.JH378145 I 4 I 1 s cebCap1.NW_016107540v1 1401837 709 + 3566421 AATAATATCACAAAGAACAGAAATTTTATACACTACAGAGCAtagtaatggaataattaatgattaaaattattaattTTAGATAGAAAATGAAGAGGATCTTTGAGAGTAGACCTCAAGGAAGC--------------AAGGAATTAGCCTTATG-AGGAAAGAGTTACCTGTGAATAAAGGAGAAACTGAAAAATTCATATGTCAAGACTTTCTGAGCAAAAAGAAAGATATGACTATTACTCACCAATGCACTACAGT-GAATAAAAAGTTGAAGACATATCTTGGAATTAAACCATGCTAgataagagcatatagggttttgataatcatggaattattttgaattaattttaaatgcgataggaatacatgagataatttcaccagagaataacatgattgcgtttgcatttcgaagaggtatatctggtgcactgtggagaataaataggttaggttaagtgcacaaataagttaggaggctactgtaat-ccagagaaaaaaggttgtggcttaggtgagaatgctgttaacgtaagtggaatgagtggtgagaagtggttaggccatggatatgtttca-aggactggccgagagaactgcagctaactcagagtgtaggggataaaatggagaacacaaagatgactctcagCAGTGGAAGTTGGCAGCTGTCACTGAAGCAATGCTGATGCCTCTTATTAGGAGGGCTACTTGGGGA i cebCap1.NW_016107540v1 I 59 I 1 s aotNan1.NW_018514471v1 1903438 677 - 9267652 AATAACATCACAAAGAACAGAAATTGTATACACTACAGAGCAtagtaatggaataatgaatgattaaaattattaattTTAGATAGAAAATGAAGGGGATCTTTGAGAGTAGACATCAAGGAAGC--------------AAGAAATTAGCCTTATG-AGGAAAGAGTTACCTGTGAATAAAGGAGAAACTGAAAAATTTATATGTCAAGACTTTCTGAGCAAAAGGAAAAATATGACTATTACTCACCACTGCACTACCGT-GAATAAAATGTTGAAGACATATCTTGGAATTAAACCATGCTggataagagcatgtagggttttgataatcatggaattattttgaatgaattttaaatgcgataggaatacatgaggtaatttcaccagagaataacatgattgtgtctgcatttcaaaggggtatatctggtgcgctgtggagaataaa-----taggttaagtgcgcaaataaattaggaagctattgtaat-ccagagaaaaaaggttgtggcttagataagaatgctgttaatttaagtggtatgagtggtgagaagtggttaggccaaggatgtatttcaaaggactggccaagagaactgcagctaaatcagagtgtagggagtaaaa----------------------------tggaagGTGGCAGCTGTCACTGAAGCAATGGTGATGCCTCTTATTACGAGGGTTACTTGGGAA i aotNan1.NW_018514471v1 I 4 I 23 a score=141983.000000 s hg38.chrUn_KI270746v1 20726 17 + 66486 TGGTAAGATCAAACCTT s panTro5.chr2A 90281181 17 + 111504155 TGGCAAGATCAAAACTT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108534791 17 - 162613886 tggcaagatcaaaactt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 143969 17 + 150013 TGGCAAGATCAAACCTT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 230172 17 + 1200634 TGGCAAGATCAAAACTT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133480553 17 - 185818997 tggcaagatcaaaactt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310241 17 + 192294377 TGGCAAGATCAAAACTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792104 17 + 3123512 tggcaagatcaaaactt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2512817 17 + 10077455 tggcaagatcaaaactt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718413 17 + 127223203 TGGCAAGATCAAAACTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185411 17 - 1799296 tggcaagatcaaaactt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1762288 17 + 6934359 tggcaagatcaaaactt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108125839 17 - 128169293 TGGCAAGATCAGAAGAT i calJac3.chr8 I 1 I 5 s saiBol1.JH378145 742848 17 - 18371965 TGGCAAGATCAAAAGAT i saiBol1.JH378145 I 1 I 5 s cebCap1.NW_016107540v1 1402547 17 + 3566421 TGGCAAGATCAGAAGAT i cebCap1.NW_016107540v1 I 1 I 5 e aotNan1.NW_018514471v1 1904115 23 - 9267652 I a score=3846112.000000 s hg38.chrUn_KI270746v1 20743 436 + 66486 CTCACTTTCAAATTTAT-GAAAAATATTGTTTTCCGAACGAATGACTTTGGGATCAGAAAGCCATCATTCTCATTGATGGTTCCACGACTACATGGGCTCACACTCCCAAGAGCAAAAGTAAATCATCAC-AAAGGTGCTTCCTGATAATTCTAGAGAATGGAGAATTACTGTAACATCTTTCTGATTTTAGGAGAGGTAGCAGTTCCCTTTTTAGCCTAAAC-GCTA-TTTT-TCTTTAAAGCTCAGCCAAGAGACTCCATTATAATTTTCAAATG-TGT-GTAACTCAAATTCTCATAT---GAAATACCACTATGC-----TTAGTCAAAACGTTTTCCCCATGTACAACTC-TATCTTGTCATTGCAATCATTTTCACAAAAGTAACTGCAGCTCACAGACCCTAAAAGTG-GAAAATCCAGGGTAAGTTATCTGATCTAGTTAGTTTT s panTro5.chr2A 90281198 441 + 111504155 CTCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAACGAATGACTTTGGGATCAGAAAGCCACCATTCTAATTGATGGTTCCACGACTACACAGGCTCACACTCCCAAGAACAAAAGTAAATCATCAC-AAAGGTGCTTCCTGATAATTCTAGAGAATGGAGAATTACTGTAACATCTTTCTGATTTTAGGAGAGGTAGCAGTTCCCTTTTTAGCCAAAAC-GCTA-TATT-GTTTTAAAGCTCAGCCAAGAGACTCCATTATAATTTTCAAATG-TGT-GTAACTTAAATTCTCATAT---GAAATACCACTATGCTTAAATTAGTCAAAACATTTTCCCCATCTACAACTC-TATCTTGTCATTGCAATCATTTTCACAAAAATGACTGCAGCTCACAGACCCTAAAAGGA-GAAAATCTAGGGTAGGTTATCTGATCTAGTTAGTTTC i panTro5.chr2A C 0 C 0 s panPan2.chr7 108534808 440 - 162613886 cTCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAACGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAAGCTCACAGTCACAAGAGCAAAATTAAATCATCAC-AAAGGTGCTTCCTGGCAATTCTAGAGAATAGAGAATTACTGTAAcatctttctgattttaggagaagtagcagttcccttttgagcctaaac-gcta-tttt---tttaaagctcagccaagagactccattataattttcaaaaattgt-gtaacttaacttctcatat---taaataccactatgcttaaattagtcaaaacattttccccatctgcaactC-TATCTTTTCATTGCAATCATTTTCACAAAGGTGACTGCAGCTAACAGACCCTAAAAGGT-GAAAATCTAGGGTAGGTTATCTGATCTAGTTAGTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 143986 442 + 150013 CTCACTTTCAAATTTAT-GAAAAATATTGTTTTCCGAACGAATGACTTTGGGATTAGAAAGCCATCATTCTAATTGATGGTTCCACGACTACACGGGCTCACACTCCCAAGAGCAAAAGTAAATCATCAC-AAAGGTGCTTCCTGATAATTCTAGAGAATGGAGAATTACTGTAACATCTTTCTGATTTTAGGAGAGGTAGCAGTTCCCTTTTTAGCCTAAAC-GCTA-TTTTTTTTTTAAAGCTCAGCCAAGAGACTCCATTATAATTTTCAAATG-TGT-GTAACTTAAATTCTCATAT---GAAATACCACTATGCTTAAATTAGTCAAAACATTTTCCCCATCTACAACTC-TATCTTGTCATTGCAATCATTTTCACAAAAGTGACTGCAGCTCACAGACCCTAAAAGGA-GAAAATCCAGGGTAGGTTATCTGATCTAGTTAGTTTG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 230189 440 + 1200634 CTCTCTTTCAAATTTAT-GAAAAATATTGTTTTCAGAACGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTGCACGACTACACAGGCTCACACTCCCAAGAGCAAAATTAAATTATCAC-AAAGGTGCTTCCTGATAATTCTAGAGAATGGAGAATTACTGTAACATCTTTCTGATTTTAGGAGAGGTAGCAGTTTCCTTTTTAGCCTAAAC-ACTA-TTTT--TTTTAAAGCTCAGCCAAGAGACTCCATTATAATTTTCAAATG-TGT-GTAACTTAAATTCCCATAT---TAAATACCACTATGCTTAAATTAGTCAAAACATTTTCCCTAGCTACAACTC-TATCTTTTCATTGCAATCATTTTCACAAAAGTGACTGCAGCTAACAGACCCTAAAAGGT-GAAAATCTAGGGTAGGTTATCTGATCTAGTTAGTTTT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133480570 441 - 185818997 cTCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAATGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAGACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTCGATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGATTTTAGGAGAGGTAGCAGTTCCCTTTTTAGCTTAAAC-ACTA-TTTT--TTTTAAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTAAC--AACTTCTCATATTAATAAATACCACTATGCTTAAATTAGTCAAAACATTC-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCACAAA-GTGACTGCAACTAACTGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTACCTGATCTAGTTAGTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310258 441 + 192294377 CTCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAATGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAGACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTCGATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGATTTTAGGAGAGGTAGCAGTTCCCTTTTTAGCTTAAAC-ACTA-TTTT--TTTTAAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTAAC--AACTTCTCATATTAATAAATACCACTATGCTTAAATTAGTCAAAACATTC-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCACAAA-GTGACTGCAACTAACTGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTACCTGATCTAGTTAGTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792121 441 + 3123512 cTCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAATGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAGACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTCGATGCAATTCTAGAGAACAGAGAATTGTTGTAACATCATTCTGATTTTAGGAGAGGTAGCAGTTCCCTTTTTAGCTTAAAC-ACTA-TTTT--TTTTAAAGCTCAGTCAAGAGACTCCATTATGATTTTCAAAAATTGT-GTAAC--AACTTCTCATATTAATAAATACCACTATGCTTAAATTAGTCAAAACATTC-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCACAAA-GTGACTGCAACTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTACCTGATCTAGTTAGTTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2512834 440 + 10077455 cTCACTTTCAAATTTAT-GAAAAATGTTGTTTTCAGAACGAACGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAGACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTCGATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGCTTTTAGGAGaggtagcagttccctttttagcttaaac-acta-tttt--tttt-aagctcagtcaagagactccattataattttcaaaaattgt-gtaac--aaCTTCTCATATTAATAAATACCACTATGCTTAAATTAATCAAAACATTT-CCCCATCTGCAACTCTTATCTTTTCATCGCGATCATTTTCACAAA-GGGACTGCAGCTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAATTAGTTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718430 443 + 127223203 CTCACTTTCAAATTTAT-GAAAAATAATGTTTTCAGAACGAAAGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAGACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTCAGTGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGATTTTAGGAGAGGTAGCAGCTCCCTTTTTAGCTTAAAC-GCTA--TTA--TTTGAAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTAACTTAACTTCTCATATTAATAAATAGCACTATGCTTAAATTAATCAAAACATTTCCCCCATCTGCAACTCTTATCTTTTCATTGCGATCATTTTCACAAA-GTGACTGCAGCTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAGTTAATTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185428 441 - 1799296 cTCACTTTCAAATTTAT-GAAAAATGTTGTTTTCAGAACGAACGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAGACTCACAAAAGCAAAATTAAATAATCAT-AAAAGTGCTTCGATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGCTTTTAGGAGAGGTAGCAGTTCCCTTTTTAGCTTAAAC-ACTA-TTTT--TTTTAAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTAAC--AACTTCTCATATTAATAAATACCACTATGCTTAAATTAATCAAAACATTT-CCCCATCTGCAACTCTTACCTTTTCATCGCGATCATTTTCACAAA-GGGACTGCAGCTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAATTAGTTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1762305 444 + 6934359 cTCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAACGAACGACTTTGGGATCAGAAAGTCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAGACTCACAAAAGCAAAATTAAATCATCAC-AAAAGTGCTTCGATATAATTCTATAGAACAGAGAATTATTGTAACATCATTCTGATTTTAGGAGAGGTAGCAGTTCCCTTTTTAGCTTAAGC-GCTATTTTT--TTTTAAAGCTCAGTCAAGACACTCCATTATAATTTTCAAAAATTGT-GTAACTTAACTTCCCATGTTAATAAATACCACAATGCTTAAATTAGTCAAAACATTT-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCACAAA-GTGACTGCAGCTAACCAACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAGCTAGTTTT i colAng1.NW_012115910v1 C 0 I 319 s calJac3.chr8 108125861 436 - 128169293 CTCACTTTCAAATTTAC-AAAAAATTTTGTTTTCAGAACTGATGACTTTGGGATCAGAAAGCTATCATTCTAATTGATGGTTCCATAACTACAGAAGTTCGAACTCACAAGAGCAAAATTAAATCATCAC-AAAGCTGCTTCTAGACAATTCTAGAGAATAGAGAATTACTGTAACAGCATTCTGATTTTAGGAGAGGTGGCAGTTCCCTTTTTAGCCTAAAT-GTTT-TTTT--TCT--AAGCTCAGCCAGGAGACACCATTATAATTTTCAATAATTTTGG-----TAACTTGTCATGT---TAAATACCACTATGCTTAAATTAGCCAAAACATTTTCCCTATGTGCAACTT-TATCTTTTCATTGCAATCATTTTCACAAAAGTGACTGCAACTAACAGACCCTAAATGGTGAAAAATCTAGGGTAGGTTATCTGATCTAGTTAGTTTT i calJac3.chr8 I 5 C 0 s saiBol1.JH378145 742870 434 - 18371965 CTCGCTTTCAAATTTACAAAAAAATGTTGTTTTCAGAACTAATGACTTTGGGATCAGAAAGCTATCATTCTAATTGATGGTTACATGACTACAGAAGCTGGAACTCACGAGAGCAAAATTAAATAATCAC-AAAGCTGCTTCTAGACAATTCTAAAGAATAGAGAATTACTGTAGCAGCATTCTGATTTTAGGAGAGGTGGCAGTTCCCTTTTCAGCCTAAAT-TTTT-TTTT--TTT--AAGCTCAGCCAAGAGACACCATTATAATTTTCAAAAAATTT-G-----CAACTTGTCATAT---TAAATACCGCTATGCTTAAATTAGTCAAAACATTTTCCCTAAGTGCAACTT-TATCTTTTCATTGCAATCATTTTCAC-AAAGTGACTGCAACTAACAGACCCTAAGTGGT-AAAAATCTAGGGTAGGTTATCTGATCTAGTTAGTTTT i saiBol1.JH378145 I 5 C 0 s cebCap1.NW_016107540v1 1402569 423 + 3566421 CTCACTTTCAAATTTAC-AAAAAATGTTGTTTTCGGAACTAATGACTTTGGGATCAGAAAGCTATCATTCTAATTGATGGTTCCGTGACTACAGAAGCTCGAACTCACAAGAGCAAAATTAAATCATCAC-AAAGCTGCTTCTAGACAATTCTAGAGAATAGAGAATTACAGTAACAGCATTCTGATTTTAGGAGAGGTGGCAGTTCCCTTTT-AGCCTAAATGGTTT-TTTT--TTT--AAGCTCAGGCAAGAGACACCATTGTAATTTTCAAAAATGTT-G-----TAACTTAACTTGT---CATA-----------TTAAATTATTCAAAACATTTCCCCTATGTGCAACTT-TATCTTTTCATTGCAATCATTTTCACAAAAGTGACTGCAACTAACAGACCCTAAATGGT-GAACATCTAGGGTAGGTTATCTGTTCTAGTTAGTTTT i cebCap1.NW_016107540v1 I 5 C 0 s aotNan1.NW_018514471v1 1904138 439 - 9267652 CTCACTTTCAAATTTAC-AGAAATTATTGTTTTCAGAACTAATGACTTTGGGATCAGAAAGCTATCATTCTAATTTATGGTTCCATGACTACAGAAGCTCGAACTCACAAGAGCAAAATTAAATCATCACAAAAGCTGCTTCTAGACAATTCTAGAGAATAGAGAATTACTGTAACAGCATTCTGATTTTAGGAGAGGTCGCAGTTCCCTTTTTAGCCTAAAT-GTTT-TTTG--TTT--AAGCTCAGCCAAGAGACACCATTATAATTTTCAAAAATTTT-GTAACTTAACTTGTCATGT---TAAATACC-CCATGCTTAAATTAGTCAAAACATTTTCCCTATGTGCAACTT-TATCTTTTCATTGCAATCATTTTCACAAAAGTGACAACAACTAACAGACCCTAAATGGT-GAAAATCTAGGGTAGGCTATCTGATCTAGTTAGTTTT i aotNan1.NW_018514471v1 I 23 C 0 a score=4567254.000000 s hg38.chrUn_KI270746v1 21179 495 + 66486 GAAGACAGGATCTAGAGATTATTTA-------------ATATGAAATAGGTCACCTGAAATGAAGTGTTTACTGAAAACAGCTTGGATCAACCCAGTTTTCTACCACTGAACCATGGATTTGGTTTCAAAAACACAACAACTCTGGAGAATATCGGCTGCTTCCAACTGTGTTGAAGGTGTTAAAGAAAAGAGCATAAAATTATAAATGATCATCTGAGGCCTTTATAGTCTCTGCTCAAGAGACTAGCGTCTTCCTTTCTTAAGGAAACATACAAATATCTTAATAATTGGGCAAAATCTAACT----ATCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTATAATggtgattcactaccttgccacgtctctgactcaaaaattagatctttgtttaggaatcaat-------ggtactctgcaacttggaaataggaagattttagaagactcAAACATTGACTTTCTTGTGTGC-------AAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT s panTro5.chr2A 90281639 496 + 111504155 GAAGACAGGATCTAGAGATTATTTA-------------ATATGAAACAGGTCACCTGAAATGAAGTGTTTACTGAAAACAGCTTGGATCTGCCCAGTTTTCTACCACTGAACCATGCATTTGGTTTAAAAAACACAACAACTCTGGGGAATATCGGCTGCTTCCAACTGTGTTGAAGGTGTTAAAGAAAAGAGCATAAAATTAAAAATGATCATCTGAGGCCTTTATAGTCTCTGCTCAAGAGACAAGAGTCTTCCATTCTTAACAAAACACCCAAATATCTTAATAATTGGGCAAAATCTAAAT----ATC--AGAGATAATTTTATCTTGAAGATTGTTAAATTATAATGGTGATTCACTACCTCGCCACGTCTCTGAGTCAAAAATTAGGTTTTTGTTTAGGAATCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGACTCAAACATTGACTTTCCTGTGTGC----AAAAAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT i panTro5.chr2A C 0 C 0 s panPan2.chr7 108535248 507 - 162613886 GAAGACAGGATCTAGAGATTATTTAGGATCTAGAGATTATATGAAATATGTCACCTGAAATGAAGTGTTTACTGAAAACAGCTTGGATCAGCCCAGTTTTCTACCATTGAACCATGCATTTGGTTTAAAAAACAGGACAACTCTGGGCATCATTGGCTGCTTCCAACTGTGTTGAAGATGTTAAAGAAAAGGGCATAAAATTATAAATGATCATCTGAGGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCTTCCATTCTTAACAAAACACCCAAATATCTTAATAATTGGGCAAAATCTAAAT----ATCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTATAATGGTGATTCACTACCTTGCCACGTCTCTGAGTCAAAAATTAGATCTTTGCTTAGGAATCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGACTCAAACATTGACTTTCTTGTGTGC--------AAAAAAAGATGTATTGAGATAAGACAAGTCTTTCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144428 497 + 150013 GAAGACAGGATCTAGAGATTATTTA-------------ATATGAAATAGGTCACCTAAAATGAAGTGTTTACTGAAAACAGCTTGGATCAACCCAGTTTTCTACCACTGAACCATGCATTTGGTTTCAAAAACACAACAACTCTGGGGAATATCGGCTGCTTCCAACTGTGTTGAAGGTGTTAAAGAAAAGAGCATAAAATTATAAATGATCATCTGAGGCCTTTATAGTCTCTGCTCAAGAGACTAGCATCTTCCATTCTTAACGAAACACCCAAATATCTTAATAATTGGGCAAAATCTAACT----ATCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTATAATGGTGATTCACTACCTTGCCACGTCTCTGACTCAAAAATTAGATCTTTGTTTAGGAATCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGGCTCAAACACTGACTTTCTTGTGTGC-----AAAAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 230629 495 + 1200634 GAAGACAGGATCTAGAGATTATTTA-------------ATATGAAATAGGTCACCTGAAATGAAGTGTTTACTGAAAACAGCTTGGATCAACCCAGTTTTCTACCACTGAACCATGCAGTGGGTTTAAAAAACACAACAACTCTGGGGAGTATTGGCTGCTTCCAACTGTGTTGAAGATGTTAAAGAAAAGAGCATAAAATTATAAATGGTCATCTGAGGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCTTCCATTCTTAACGAAACACCCAAATATCTTAATAATTGGGCAAAATCTAAAT----ATCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTATAATGGTGATTCACTACCTTGCCACGTCTCTGAGTCAAAAATCAGATCTTTGTTTAGGAATCAAC-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGACTCAAACATTGACTTTCTTCTGTGC-------AAAAAAAAGACATATTGAGACAAGACCAGTCTTTCCT i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133481011 492 - 185818997 GGAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAAACTGCTTGGATCAGCCCAGTTTTCTACCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCTTCCATTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAAATCTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactaccttgcctcgtctctgagtcaaaaattagatcttcgtttaggaatcaat-------ggtactctgcaacttggaaATAGGAAGATTTTAGAAGACTCAAACATTGACTTTGTTGTGTGC-------AAAAAAAAGATGTATTGGGATAAGACAAGTCTTTCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310699 492 + 192294377 GGAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAAACTGCTTGGATCAGCCCAGTTTTCTACCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCTTCCATTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAAATCTAAAT----ATCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTACAATGGTGATTCACTACCTTGCCTCGTCTCTGAGTCAAAAATTAGATCTTCGTTTAGGAATCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGACTCAAACATTGACTTTGTTGTGTGC-------AAAAAAAAGATGTATTGGGATAAGACAAGTCTTTCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792562 492 + 3123512 GGAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAAGTGTTGACTGAAAACTGCTTGGATCAGCCCAGTTTTCTACCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCTTCCATTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAAATCTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactaccttgcctcgtctctgagtcaaaaattagatcttcgtttgggaatcagt-------ggtactctgcaacttggaaATAGGAAGATTTTAGAAGACTCAAACATTGACTTTGTTGTGTGC-------AAAAAGAAGATGTATTGAGATAAGACAAGTCTTGCCT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513274 499 + 10077455 GAAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAAACAGCTTGGATCAGCCCAGTTTTCTACCATTGAACCATATATTTGGTTTAAAAACCACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCACAAGAGACTAGAGTCTTCCATTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAAATCTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactaccttgccacgtctctgagtcaaaaattagatctttgtttaggaatcaat-------ggtaccctgtaacttggaaATAGGAAGATTTTAGAAGACTCAAACATTGACTTTGTTGTGTGCAAAAAAAAAAAAAAAGACATATTGAGATAAGACAAGTCTTTCCT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718873 483 + 127223203 GAAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAAACTGCTTGGATCAGCCCAGTTTTCTACCATTGAACCATGTATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAACATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCTTCCATTCTTAACA------CCAAATATGTTAATAATTAGGCAAAATCTAAAT----ATCAGAGAGATAATTTTATCTTAAAGATTGTTAAATTACAGTGGTGATTCACTACCTTGCCACGTCTCTGAGTCAAAAATTAGATCTTTGTTTAGGAATCAAT-------GGTACTCTGCAACTTAGAAATAGGAAGATTT------ACTCAAACATTGACTTTGTTGTGTGC------AAAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185869 492 - 1799296 GAAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACTTGAAATGAAGTGTTTACTGAAAACAGCTTGGGTCAGCCCAGTTTTCTACCATTGAACCATATATTTGGTTTAAAAACCACAACAACTCTGGGGAACATTGACTACTTCCAACT-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCACAAGAGACTAGAGTCTTCCATTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAAATCTAAAT----ATCAGAGAGATAAttttatcttgaagattgttaaattacaatggtgattcactaccttgccacgtctctgagtcaaaaattagatctttgtttaggaatcaat-------ggtaccctgcaacttggaaataggaagattttagaagactcAAACATCGACTTTGTTGTGTGC-------AAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763068 495 + 6934359 gaaaaCAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAATTGTTTACTGAAAACAGCTTGGATCAGCCCAGTTTTCTACCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACT-TGTTGAAGATGTTTAAGAAAAGAGCATAAAATTATTAATGACCATCTGAGGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCCTCCGTTCTTAACAGAACACCCAAACATGTTAATAATTAGGCAAAATTTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactgccttgccacgtctctgagtcaaaaattagatctttgtttaggaatcaat-------ggcactctgcaagttggaaataggaagattttagaagactccaaCATTGACTTTGTTGTGTGC------AAAAAAAAAGACGTATTGAGGTGAGACAAGTCTTTCCT i colAng1.NW_012115910v1 I 319 C 0 s calJac3.chr8 108126297 496 - 128169293 GAAGATAGGATCTAGAGATTATTTA-------------ATATGGAATA-ATCACCTGAAATGAAGCATTTACTGAAAACAGCTTGGATCAGCCCAGTTTT---CCATTGAACCATGTATTTGGTTTAAAAAACACAA-AACTGTGGAGAACATTGGCTGCTTCCAGCCATGTTGAAGATGATATAGAAGAGAACATAAAAGAATAAATAACCATCTAAGGCCTACATAGTCCCTGCTCAAGAGACTAGAGTCTTCCATTCTTAAAGGAACACCCAAATATCTTAATAATTGGGCAAAAACTAAAT----ATCAGAGAGATCATTTTATCTTGAATATTGTTAAATTGTGTTGGTGTTTCACTACCTTGCCATGTCTCTGAGTCAAAATTTAGGTCTTTGTTTAGGAATTGGTTTGTTTAGATCCTCTGCAGCTTGTAAATAGGAAGAGTTTAGAGGATTCAAACATTGGCTTTCTTGTGAGC--------AAAAAATGATGCATTGAGATAAGACAAGTCTTCCCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743304 495 - 18371965 GAAGGCAGGATCTAGAGATTATTTA-------------ATATGGAATA-ATCATCTGAAATGAAGCGTTTACTGAAAACAGCTTGGATCAGCCCCGTTTCCTACCATTGAACCATGTATTTGGTTTAAAAACCACAA-AACTGTGGGGAACATTGGCTGCTTCCAGCCGTGTTGAAGATGATAAAGAAAAGAACATAAAAGAACAAATCACCATCTCAGGCCAATATAGTCCCTGCTCAAGAGACTAGCGTCTT-CATACTTAAAGGGACACCCAAATATCTTCATAATTGAGCAAAAACTAAATATTAATCAGAGAGATCATTTTATCTTGAATATTGTTAAATGATCATGGTGTTTCACTACCTTGTCATATCTCTGAGTCAAAATTTAGGTCTTCGTTTAGGAATCAAT-------GACCCTCTGCAACTTGGAAATAGGAAGACTTTAGAGGATTCAAACATTGGCTTTCTTGTGAGC--------AAAAAATGATTCATTGAGATAAGACAAGTCTTCCCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1402992 490 + 3566421 GAAGACAGGATCTAGAGATTATTTA-------------ATATGGAATA-ATCATCTGAAATGAATCGTTTACTGAAAACAGCTTGGATCAGCCCAGTTTTCTACCATTGAACCATGTATTTGGTTTAAAAAACACAA-AACTGTGGGGAACATTGGCTGCTTCCAGCCATGTTGAAGATGATAAAGAAAAGAACATAAAAGAATAAATAACCATCTCAGGCCTATATAGTCCCTGCTCAAGAGACTAGAGTCTT-CATTCTTAAAGGAACACCCAAATATCTTAATAATTGGGCAAAAACTAAAC----ATCAGAGAGATCATTTTATCTTGAATATTGTTAAATTGTAATGGTGTTTCACTACCTTGCCATATCTCTGAGTCAAAATTTAGGTCTTTGTTTAGGAATCAAT-------GATCCTCTGCAACTTGGAAATAGGAAGATTTTAGAGGATTCAAA-ATTGGCTTTCTCGTGAGC--------AAAAAATGATGTATTGAGATAAGACAAGTCTTCCCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904577 491 - 9267652 GAAGACAGGATCTAAAAATTATTTA-------------ATATGGAATA-ATCATCTGAAATGAAAAGTTTACTGAAAACAGCTTGGATCAGCCCAGTTTTCTACCATTGAACCATGTATTTGGTTTAAAAAACACAA-AACTGTGGGGAACATTGGCTGCTTCCAGCCGTGTTGAAGATGCTAAAGAAAAGAGCCTAAAAGAATAAATAACCATATAAGGCCTATATAGTCCCTGCTCAAGAGACTAGAGTCTTCCATTCTTAAAGGAACACCCAAATATCTTGATAATTGGGCAAAAACTAAAT----ATCAGAGAGATAATTTTATCTTGAATATTGTTAAATTATAATGGTGTTTCACTACCTTGCCATGTCTCTGAGTCAAAATTTAGGTCTTTGTTTAGGAATCAAT-------GATCCTCTGCAACTTGGAAATAGAAAGATTCTAGAGGATTCCAACATTGGCTTTCTTGTGAGC---------AAAAATGATGTATTGAGATAAGACAAGTCTTCCCT i aotNan1.NW_018514471v1 C 0 I 885 a score=500311.000000 s hg38.chrUn_KI270746v1 21674 70 + 66486 TGCAAGGATACCTCTAATGCTCACACACCACCTC---CCCTAACGTTAATATAGCTTCCAGGCCACTAACCGG s panTro5.chr2A 90282135 70 + 111504155 TGCAAGGATACCTCTAATGCTCATACACCACCTC---CCCTAACATTAATACAGCTTCCAGGTCACTAACCAG i panTro5.chr2A C 0 C 0 s panPan2.chr7 108535755 70 - 162613886 TGCAAGGATACCTCTAATGCTCATATACCACCTC---CCCTAACATTAATATAGCTTCCAGATCACTAACCAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144925 70 + 150013 TGCAAGGATACCTGTAATGCTCACACACCACCTC---CCCTAACGTTAATATAGCTTCCAGGCCACTAACCGG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr4_GL397525_2_random 231124 70 + 1200634 TGCAAGGATACCTCTAATGCTCATACACTACCTC---CCCTAACGTTAATATAGCTTCCAGATCACTAACCAG i nomLeu3.chr4_GL397525_2_random C 0 C 0 s rheMac8.chr3 133481503 70 - 185818997 TGCAAGGATACGTCTAATTCTCATACACCACCTC---CCCTAACCTAAATATAGCTTCAAGATCACTAACCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67311191 70 + 192294377 TGCAAGGATACGTCTAATTCTCATACACCACCTC---CCCTAACCTAAATATAGCTTCAAGATCACTAACCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2793054 70 + 3123512 TGCAAGGATACGTCTAATTCTCATACACCACCTC---CCCTAACCTAAATATAGCTTCAAGATCACTAACCAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513773 70 + 10077455 TGCAAGGATATGTCTAATTCTCATACACCACCTC---CCCTAACCTAAATATAGCTTCCAGATCACTAACCAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719356 70 + 127223203 TGCAAGGATACGTCTAATTCTCATACACCACCTC---CCCTAACCTAAATATAGCTTCCAGATCACTAACCAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1186361 70 - 1799296 TGCAAGGATATGTCTGATTCTCATACACCACCTC---CCCTAACCTAAATATAGCTTCCAGATCACTAACCAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763563 70 + 6934359 TGCAAGGATACGTCTAATTCTCATACACCACCTC---CGCTAACCTAAATATAGCTTCCGGATCACTAACCAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126793 62 - 128169293 -----------GTTTGATGCTCATGTACCACCTCCTACTCTAACCTTAATAAAGCTTCCAGATCACTAACTAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743799 62 - 18371965 -----------GTCTGATGCTCATGTACCACCTCCTACTCTAACCTTAATAAAGCTTCGAGATCACTAACTAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1403482 62 + 3566421 -----------GTTTAATCCTCATGTACCACCTCCTACTCTAACCTTAATAAAGCTTCCAGATCACTAACTAC i cebCap1.NW_016107540v1 C 0 C 0 e aotNan1.NW_018514471v1 1905068 885 - 9267652 I a score=585895.000000 s hg38.chrUn_KI270746v1 21744 56 + 66486 TGTCAGAGAGCAGCCTATGCAACTACAGATTCAAAAGATGTCAAACACAGGGTCAA s panTro5.chr2A 90282205 56 + 111504155 TGTCAGAGAGCAGCCCATGCAACTAGAAATTCAAAAGATGTCGAACATAGGGTCAA i panTro5.chr2A C 0 N 0 s panPan2.chr7 108535825 56 - 162613886 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCGAACACAGGGTCAA i panPan2.chr7 C 0 N 0 s gorGor5.CYUI01000341v1 144995 56 + 150013 TGTCAGAGAGCAGCCTATGCAACTACAGATTCAAAAGATGTCAAACACAGGGTCAA i gorGor5.CYUI01000341v1 C 0 N 0 s nomLeu3.chr4_GL397525_2_random 231194 56 + 1200634 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAACACAGGGTCAA i nomLeu3.chr4_GL397525_2_random C 0 N 0 s rheMac8.chr3 133481573 56 - 185818997 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAA i rheMac8.chr3 C 0 N 0 s macFas5.chr3 67311261 56 + 192294377 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAA i macFas5.chr3 C 0 N 0 s macNem1.NW_012011522v1 2793124 56 + 3123512 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAA i macNem1.NW_012011522v1 C 0 N 0 s cerAty1.NW_012000909v1 2513843 56 + 10077455 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAA i cerAty1.NW_012000909v1 C 0 N 0 s chlSab2.chr21 5719426 56 + 127223203 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAA i chlSab2.chr21 C 0 N 0 s manLeu1.NW_012105809v1 1186431 56 - 1799296 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAA i manLeu1.NW_012105809v1 C 0 N 0 s colAng1.NW_012115910v1 1763633 56 + 6934359 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAA i colAng1.NW_012115910v1 C 0 N 0 s calJac3.chr8 108126855 56 - 128169293 TGTCAGAGAGCAGCCTATGCAGCTACAAACTCAAAAGAGGCCAAATACAGGGTCAA i calJac3.chr8 C 0 N 0 s saiBol1.JH378145 743861 56 - 18371965 TGTCAGAGAGCGGCCTATACAACTACAAATTCAAAAGAGGCCAAATGCAGGGTCAA i saiBol1.JH378145 C 0 N 0 s cebCap1.NW_016107540v1 1403544 56 + 3566421 TGTCAGAGAGCGGCCTATGCAACTACAAATTCAAAAGAAGCCAAATACAGGGTCAA i cebCap1.NW_016107540v1 C 0 N 0 s aotNan1.NW_018514471v1 1905953 56 - 9267652 TGTCAGAGAGCAGCCTATGCAACTGCAAATTCAAAAGAGGCCAAATACAGGGTCAA i aotNan1.NW_018514471v1 I 885 N 0 a score=41888.000000 s hg38.chrUn_KI270746v1 21800 7 + 66486 TAAACTC s panPan2.chr2A 89816565 7 + 114371477 TAAACTC i panPan2.chr2A N 0 C 0 s gorGor5.CYUI01015730v1 825859 7 - 998796 TAAACTC i gorGor5.CYUI01015730v1 N 0 C 0 s nomLeu3.chr14 73212881 7 + 94967081 TAAACTC i nomLeu3.chr14 N 0 C 0 s rheMac8.chr13 108468452 7 + 108979918 TAAACTC i rheMac8.chr13 N 0 C 0 s macFas5.chr13 17620432 7 + 111193037 TAAACTC i macFas5.chr13 N 0 C 0 s macNem1.NW_012014799v1 10479104 7 - 11597128 TAAACTC i macNem1.NW_012014799v1 N 0 C 0 s cerAty1.NW_012001187v1 4977308 7 - 5626091 TAAACTC i cerAty1.NW_012001187v1 N 0 C 0 s manLeu1.NW_012101154v1 250518 7 - 409142 TAAACCC i manLeu1.NW_012101154v1 N 0 C 0 s calJac3.chr14 14799874 7 + 108792865 TAAACTC i calJac3.chr14 N 0 C 0 s saiBol1.JH378124 27240985 7 - 28799539 TAAACTC i saiBol1.JH378124 N 0 C 0 s cebCap1.NW_016107537v1 57061 7 - 3620821 TAAACTC i cebCap1.NW_016107537v1 N 0 C 0 a score=1104479.000000 s hg38.chrUn_KI270746v1 21807 207 + 66486 TAAACTACTCAGGTCACAATTTAGAACCCCTTTGTTGATCCCTATAGAGTGTTCCCAGATATCAAATGACAAATAGGTCTTTGATGAAGAAACACCCTGTAAAGCCATATTGCTCTGGT--------------TTTtgtgtgtgag--------------------tgtgtgtgtgtgtgtatgtgtgtgt-------------ATTTTCTTCTCTTTTGAAAACTGTAAATAGAGGAATTTTCATTACAAATG s panPan2.chr2A 89816572 220 + 114371477 TAAACTACTCAGATCACAATTTAGAACCCCTTTGTTGATCCCTATAGAGTGTTCCCGGATGTGAAATGACAAATAGACCTTTGATGAAGAAACACCCTGTAAAGCCATATTGCTCTGGT--------------TTTtgtgtgtgaa--------------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTATTTTTTTCTCTCCTGAAAACTGTAAATGGAGGAATTTTCATTACAAATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 825866 193 - 998796 TAAACTACTCAGATCACAATTTAGAACCCCTTTGTTGATCCCTATAGAGTGTTCCCGGATGTGAAATGACAAATAGGCCTTTGATGAAGAAACACCCTGTAAAGCCATATTGCTCTGGT--------------TTTTGTGTGTGAA--------------------TGTGTGTGTGT---------------------------ATTTTTTTCTCTCCTGAAAACTGTAAATGGAGGAATTTTCATTACAAATG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73212888 209 + 94967081 TAAACTACTCAGATCACAATTTAGAACCCCTTTGTTGATCCCTATAGAGTGTTCCCGGATGTCAAATGACAAATAGGCCTTTGATGAAGAAACACCCTGTAAAGCCATATTGCTCTGGT--------------TTTtgtgtgtgag--------------------tgtgtgtgtgtgtgtgtgtgtgtgtgt-----------ATTTTTTTCTCTCCTGAAAACTGTAAATAGAGGAATTTTCATTACAAATG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108468459 197 + 108979918 AAAACTACTCAGGTCACAATTTAGAACCCCTTTGTTGATCCCTATAGAGTGTTCCCGGATGTCAAATGAC----AGGCTCTTAATGAAGAAACACCCTGTAAAAGTGTATTGCTCCGGT--------------TTTtgtgtgtgaa------------------tgtgtgtgtgtgtgtgtgt---------------------ATTTTTTTCTCTCCTGAAAACTGTAAATAGAATAATTTTCATTACAAATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17620439 199 + 111193037 AAAACTACTCAGGTCACAATTTAGAACCCCTTTGTTGATCCCTATAGAGTGTTCCCGGATGTCAAATGAC----AGGCTCTTAATGAAGAAACACCCTGTAAAAGTGTATTGCTCCGGT--------------TTTtgtgtgtgaa----------------tatgtgtgtgtgtgtgtgtgt---------------------ATTTTTTTCTCTCCTGAAAACTGTAAATAGAATAATTTTCATTACAAATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10479111 215 - 11597128 AAAACTACTCAGGTCACAATTTAGAACCCCTTTGTTGATCCCTATAGAGTGTTCCCGGATGTCAAATGAC----AGGCTCTTAATGAAGAAACACCCTGTAAAAGTGTATTGCTCTGGT--------------TTTtgtgtgtgaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt---------------------ATTTTTTTCTCTCCTGAAAACTGTAAATAGAATAATTTTCATTACAAATG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4977315 195 - 5626091 TAAACTACTCAGGTCACAATTTAGAACCCCTTTGTTGATCCCTATAGAGTGTTCTCGGATATCAAATGAC----AGGCTCTTAATGAAGAAACACCCTGTAAAAGTGTATTGCTCTGTT--------------TTTtgtgtgtgaa--------------------tgtgtgtgtgtgtgtgt---------------------ATTTTTTTCTCTCCTGAAAACTGTAAATAGAATAATTTTCATTACAAATG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16480377 195 + 107702431 TAAACTACTCAGGTCACAGTTTAGAACCCCTTTGTTGATCCCTATAGAGTGTTCCCGGATGTCAAATGAC----AGGCTCTTAATGAAGAAACACCCTGTAAAAGTGTATTGCTCTAGT--------------TTTtgtgtgtgaa--------------------tatgtgtgtgtgtgtgt---------------------ATTTTTTTCTCTCCTGAAAATTGTAAATAGAATAATTTTCATTACAATTG i chlSab2.chr14 N 0 C 0 s manLeu1.NW_012101154v1 250525 195 - 409142 TAAACTACTCAGGTCACAATTTAGAACCCCTTTGTTGATCCCTATAGAGTGTTCCCGGATGTCAAATGAC----AGGCTCTTAATGAAGAAACACCCTGTAAAAGTGTATTGCTCTGTT--------------TTTtgtgtgtgaa--------------------tgtgtgtgtgtgtgtgt---------------------gtTTTTTTCTCTCCTGAAAACTGTAAATAGAATAATTTTCATTACAAATG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14799881 187 + 108792865 TAAACTACTCAGGTCACAATTTAGAACTCCT---TTGATCCCTATAAACCATTACCTGATGTCAAATGACAAATAGGCCCTTGATGAAGAAAAGCCCTGTAAAGCTGTATTGCTCTGGG------------------gtgtgtgtg--------------------tgtgtgtgtgtgtgtgt---------------------ATTTTTTCCTCTTCTGAAAACTGTT-----AAGACTTTTCATTACAAATG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27240992 209 - 28799539 TAAACTACTCAGGTCACAATTTAGAACCCCTTTGTTGATCCCTATAAAGCATTCCCTGACGTCAAATGACAAATAGGCCCTTGATGAAGAAAAGCCCTGTAAAGCTGTATTGCTCTGGGGGgtgtgtgtgtgtgtgtgtgtgtgtg--------------------cgtgtgtgtgtgtgtgt---------------------gtATTTTCCTCTTCTGAAAACTGTT----GAAGACTTTTCATTACAAATA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 57068 208 - 3620821 TAAACTACTCAGGTCACAATTTAGAGCCCCTTTGTTGATCACTATAAAGCATTCCCTGATATCAAATGACAAATAGGCCCTTGATGAAGAAAAGTCCTGTAAAGCTGTATTGCTCTGGT----Ttgtgtgtgtgtgtgtgtgtgtg--------------------tgtgtgtgtgtgtgtgt---------------------ATTTTTTCCTCTTCTGAAAACTGTTAA-AGAAGACTTTTCATTACAAATG i cebCap1.NW_016107537v1 C 0 C 0 a score=4272984.000000 s hg38.chrUn_KI270746v1 22014 677 + 66486 AAAATGTTTCTGTTCCATATTTATTTCCTGTCTAAT-GTACTTTGCTCTTCCTGGATCTAGTAAGGATCTCAGCTTTTCTTTTTTATACCTGCAAAAAATTACATCAA-G-----CTTCATTTTTCATGTCAATTACTGACATATTTTCAAGCCTTCACAAGTTATTTCTGAAGATTT-GGTGCATCAAGGAGAGAC--TGTCATTGTAGTTAAAGAAGTT------TTTAAATAGGTTATATTCAATAAAATTTCAGAGCTTGTTTCTCTGGAAAGCATAGACATAGTGGTGTTATGGGTAGTTAAACATAAAATAGCTCCACAAAGTGTTGTGTACATAAAAGTGTTCATATTCTGGAAAATTCTACTTTATTGCTCAGT-ACTGTCTGCTGGAGAGGAAAATAGGTAAGATAGGCTGCTGAGCCTATGATAATAACTCATAATATGAGGTGAAAGCATAGAGACAAAATGAGAGATGATAGATACTCAAACGGATGTGAGTGAAGAACAGCTGTGAAC-----GTGTCTATGGGAGATAGGAGGCCATGGGGCTGCTTT-TGTGAAGAAGGAATTTG-TACACGTTAGTCAAGTGTCTTGACACATTTAACATTTTAATAAAGCAAAACCTTATCTTCAGATGTGTCAGAATAGG-ATTGTACAGATGTCACATTACAGTGGTGGTGAAAATAATGAAG- s panPan2.chr2A 89816792 680 + 114371477 AAAATGTTTCTGTTCCATATTTATTTCCTGTCTAAT-GTACTTTGCTCTTCTTGGATCTAGTAAGGATCTCAGCTTGTCTTATTTATACCTGCAAAAAATTATGTCAATG-----CATCATTTTTCATGTCAATTACTGACATATTTTCAAGTCTTCACAAGTTATTTCTGAAGATTTCGGTGCATCAAGGAGAGAC--TGTCACTGCAGTTAAAGAAGTT------TTTAAATAGGTTATATTCAATAAAATTTCAGAGCTTGTTTCTCTGGAAAGCATAGACATAGTGGTGTTATGGGTAGTTAAACATAAAATAGCTCCACAAAGTGTTGTGTATATAAAAGTGTTCATATCCTGGAAAATTCTAATTTACTGTTCAGT-ACTGTCTCCTGGAGAGGAAAATAGGTAAGATAGGCTGCTAAGCCTATGATAATAACTCATAATATAAGGTGAAAGCATAGAGACAAAATGAGAGATGATAGATACTCAAACCGATGTGAGTGAAGAACAGCTGTGAAAC---AGTGTCTATGGGAGAGAGGAGACCATGGGGCTGCTTT-TGTGAAGAAGGAATTTG-TACACGTTAGTCAAGTGTCT-GACACATTTAACATTTTAATAAAGCAAAACCTTATCTTCACATGTGTCAGAATGGG-ATTGTACAGATGTCACAATACGGTGGTGCAGAAAATAATGAAG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 826059 679 - 998796 AAAATGTTTCTGTTCCATATTTATTTCCTGTCTAAT-GTACTTTGCTCTTCTTGGATCTAGTAAGGATCTCAGCTTGTCTTATTTATACCTGCAAAAAATTATGTCAATG-----TGTCATTTTTCATGTCAGTTACTGACATATTTTCAAGTCTTCACAAGTTATTTCTGAAGATTTTGGTGCATCACGGAGAGAC--TGTCATTGTAGTTAAAGAAGTT------TTTAAATAGGTTATATTCAATAAAATTTCAGAGCTTGTTTCTCTGGAACG-ATAGACATAGTGGTGTTATGGGTAGTTAAACATAAAATAGCTCCACAAAGTGTTGTGTACATAAAAGTGTTCATATCCTGGAAAATTCTAATTTACTGCTCAGT-ACTGTCTCCTGGAGAGGAAAATAGGTAAGATAGGCTGCTAAGCCTATGATAATAACTCATAATATGAGGTGAAAGCATAGAGACAAAATGAGAGATGATAGATACTCAAACTGATGTGAGTGAAGAACAGCTGTGAAAC---AGTGTCTATGGGAGAGAGGAGACCATGGGGCTGCTTT-TGTGAAGAAGGAATTTG-TACACGTTAGTCAAGTGTCT-GACACATTTAACATTTTAATAAAGCAAAACCTTATCTTCACATGTGTCAGAATGGG-ATTGTACAGATGTCACAATACGGTGGTGCAGAAAATAATGAAG- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73213097 680 + 94967081 AAAATGTTTCTGTTCCATATTTATTTCCGGTCTAAT-ATACTTTGCTCTTCTTGGATCTAGTAAGGATCTCAGCTTGGCTTACTTATACCTGCAAAAAATTATGTCAATG-----CTTCATTTTTCATGTCAATTACTGATATATTTTCAAGTCTTCACAAGTTATTTCTGAAGATTTTGGTGCATCAAGGAGAGAC--TGTCATTGTAGTTAAAGAAGTT------TTTAAATAGGTTATATTCAATAAAATTTCAGAGCTTGTTTCTCTGGAAAGCATAGACATAGTGGTGTTATGGGTAGTTAAATTTAAAATAGCTCCACAAAGTGTTGTGTACGTAAAAGTGTTCATATCCTGGAAAATTCTAATCTACTGCTCAGT-ACTGTCTCCTGGAGAGGAAAATAGGTAAGATAGGCTGCTGAGCCTATGATAATAACTCATAATATGAGGTGAAAGCATAGAGACAAAATGAGAGACGATAGATACTCAAACTGATGTGAGTGAAGAACAGCTGTGAAAC---AGTATCTATGGGAGAGAGGAGGCCATGGGGCTGCTTT-TGTGAAGAAGGAATTTG-TACACATTAGTCAAGTGTCT-GACACATTTAACATTTTAATAAAGCAAAACCTTATATTCACATGTGTCAGAATGGG-ATTGTACAGATGTCACAATACAGTGGTGGTGAAAATAATGAAG- i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108468656 685 + 108979918 AAAATATTCCTGTTCCATATTTATTTCCCGTCTAAT-GTACTTTGCTCTTCTTGAATCTAGTAAGGATCTCAGCTTGTGTTATTTATACCTTCAAAAAATTATGTCAACA-----CTTCATTTTTCATGTCAATTACTGACATGTTTTCAAGTCTTCACATGTTATTTCTGAAGATTTTGGTGCATCGAGGAGAGACAGTGTCATTGTAGTTAAAGAAGTT------TTTGAATAGTTTATATTCAATAAAATTTCAGAGCTTGTTTCTCTGGAAAGCATAGACATAGTGGCGTTATGGGTAGTTAAACATAAAATAGCTCTACAAAGTGTTGTGTACATAAAAGTGTTCATATCTTGAAAGATTCTAATTTACTGCTCAGT-ACTGTCTCCTGGAGAGGAAAATAGGTAAGATAGGCTCCTGAGCCTATGATAATAACTCATAATATGAAGTGAAAACATAGAGACAAAATGAGAGGTGATAGATACTCAAACCGATGTGAGTGAAGAACAGCTGTGAAACAAGAGTGTCTATGGGAGAGAGGAGGTCATGGGACTGCTTT-TGTGAAAAAGGAATTTG-TACATGTTAGTCAAGTGTCC-TACACATTTAACATTTTAATAAAGTAAAATCTTATCTTCCTGTGTGTCAATATGGG-ATTGTACAGATGTCACAATGCAGTGGTGGTGAGAATAATGAAG- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17620638 685 + 111193037 AAAATATTCCTGTTCCATATTTATTTCCCGTCTAAT-GTACTTTGCTCTTCTTGAATCTAGTAAGGATCTCAGCTTGTGTTATTTATAGCTTCAAAAAATTATGTCAACA-----CTTCATTTTTCATGTCAATTACTGACATGTTTTCAAGTCTTCACATGTTATTTCTGAAGATTTTGGTGCATCGAGGAGAGATAGTGTCATTGTAGTTAAAGAAGTT------TTTGAATAGTTTATATTCAATAAAATTTCAGAGCTTGTTTCTCTGGAAAGCATAGACATAGTGGCGTTATGGGTAGTTAAACATAAAATAGCTCTACAAAGTGTTGTGTACATAAAAGTGTTCATATCTTGAAAGATTCTAATTTACTGCTCAGT-ACTGTCTCCTGGAGAGGAAAATAGGTAAGATAGGCTCCTGAGCCTATGATAATAACTCATAATATGAAGTGAAAACATAGAGACAAAATGAGAGGTGATAGATACTCAAACCGATGTGAGTGAAGAACAGCTGTGAAACAAGAGTGTCTATGGGAGAGAGGAGGTCATGGGACTGCTTT-TGTGAAAAAGGAATTTG-TACATGTTAGTCAAGTGTCT-AACACATTTAACATTTTAATAAAGTAAAATCTTATCTTCCTGTGTGTCAGTATGGG-ATTGTACAGATGTCACAATGCAGTGGTGGTGAGAATAATGAAG- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10479326 685 - 11597128 AAAATATTCCTGTTCCATATTTATTTCTCGTCTAAT-GTACTTTGCTCTTCTTGAATCTAGTAAGGATCTCAGCTTGTGTTATTTATACCTTCAAAAAATTATGTCAACA-----CTTCATTTTTCATGTCAATTACTGACATGTTTTCAAGTCTTCACATGCTATTTCTGAAGATTTTGGTGCATCGAGGAGAGACAGTGTCATTGTAGTTAAAGAAGTT------TTTGAATAGTTTATATTCAATAAAATTTCAGAGCTTGTTTCTCTGGAAAGCATAGACATAGTGGCGTTATGGGTAGTTAAACATAAAATAGCTCTACAAAGTGTTGTGTACATAAAAGTGTTCATATCTTGAAAGATTCTAATTTACTGCTCAGT-ACTGTCTCCTGGAGAGGAAAATAGGTAAGATAGGCTCCTGAGCCTGTGATAATAACTCATAATATGAAGTGAAAACATAGAGACAAAATGAGAGGTGATAGATACTCAAACCGATGTGAGTGAAGAACAGCTGTGAAACAAGAGTGTCTATGGGAGAGAGGAGGTCATGGGACTGCTTT-TGTGAAAAAGGAATTTG-TACATGTTAGTCAAGTGTCT-AACACATTTAACATTTTAATAAAGTAAAATCTTATCTTCCTGTGTGTCAGTATGGG-ATTGTACAGATGTCACAATGCAGTGGTGATGAGAATAATGAAG- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4977510 682 - 5626091 AAAATATTCCTCTTCCATATTTATTTCCCATCTAAT-GTACTTTGCTCTTCTTGAATCTAGTAAGGATCTCAGCTTGTGTTATTTATACCTTCAAAAAATTATGCCAACA-----CTTCATTTTTCATGTCAATTACTGACATGTTTTCAAGTCTTCACTTGTTATTTCTGAAGATTTTGGTGCATCGAGGAGAGACAGTGTCATTGTAGTTAAAGAAGTT------TTTGAATAGTTTATATTCAATAAAATTTCAGAGCTTGTTTCTCTGGAAAGCATAGACATAGTGGCATTATGGGTAGTTAAACATAAAATAACTCTACAAAGTGTTGTGTACATAAAAGTGTTCATATCTTGAAAGATTCTAATTTACTGCTCAGT-ACTATCTCCTGGAGAGGAAAATAGGTAAGATAGGCTCCTGAGCCTATGATAATAACTCATAATATGAAGTGAAAACATAGAGACAAAATGAGAGGTGATAGAT----AAACTGATGTGAGTGAAGAACAGCTGTGAAACAAGAGTGTCTATGGAAGAGAGGAGGTCATGGGACTGCTTT-TGTGAAAAAGGAATTTATTACATGTTAGTCAAATGTCT-GACACATTTAACATTTTAATAAAGTAAAATCTTACCTTCCCGTGTGTCAGTATGGG-ATTGTACAGATGTCACAATGCAGTAGTGGTGAGAATAATGAAG- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16480572 684 + 107702431 AAAATATTCCTGTTCCATATTTATTTCCCGTGTAAT-GTACTTTGCTCTTCTTGAATCTAGTAAGGATCTCAGCTTGTGTTATTTATACCTTC-AAAAATTATGTCAACA-----CTTCGTTTTTCATGTCAATTACTGACATGTTTTCAAGTCTTCACATGTTATTTCTGAAGATTTTGGTGCATCGAGGAGAGACAGTGTCATTGTAGTTAAAGAAGTT------TTTGAATAGTTTATATTCAATAAAATTTCAGAGCTTGTTTCTCTGGAAAGCATAGACATAGTGGTGTTATGGGTAGTTAAACATAAAATAACTCTACAAAGTGTTGTGTACATAAAAGTGTTCATATCTTGAAAAATTCTAATTTACTGCTCAGT-ACTGTCTCCTGGAGAGGAAAATAGGTAAGATAGGCTCCTGAGCCTATGATAATAACTCGTAATATGAAGTGAAAACATAGAGCCAAAATGAGAGGTGATAGATACTCAAACCGATGTGAGTGAAGAACAGCTGTGAAACAAGAGTGTCTATGGGAGAGAGGAGGTCATGGGACTGCTTT-TGTGAAAAAGGAATTTG-TACATGTTAGTCAAGTGTCT-GACACATTTAACATTTTAATAAAGTAAAATCTTATCTTCCCGTGTGTCAGTATGGG-ATTGTACAGATGTCACAATACAGTGGTGGTGAGAATAATGAAG- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 250720 686 - 409142 AAAATATTCCTGTTCCATATTTATTTCCCATCTAAT-GTACTTTGCTCTTCTTGAATCTAGTAAGGATCTCAGCTTGTGTTATTTATACCTTCAAAAAATTATGTCAACA-----CTTCATTTTTCATGTCAATTACTGACATGTTTTCAAGTCTTCACATGTTATTTCTGAAGATTTTGGTGCATCGAGGAGAGACAGTGTCATTGTAGTTAAAGAAGTT------TTTGAATAGTTTATATTCAATAAAATTTCAGAGCTTGTTTCTCTGGAAAGCATAGACATAGTGGCATTATGGGTAGTTAAACATAAAATAACTCTACAAAGTGTTGTGTACATAAAAGTGTTCATATCTTGAAAGATTCTAATTTACTGCTCAGT-ACTGTCTCCTGGAGAGGAAAATAGGTAAGATAGGCTCCTGAGCCTATGATAATAACTCATAATATGAAGTGAAAACATAGAGACAAAATGAGAGGTGATAGATACTCAAACCAATGTGAGTGAAGAACAGCTGTGAAACAAGAGTGTCTATAGGAGAGAGGAGGTCATGGGACTGCTTT-TGTGAAAAAGGAATTTGTTACATGTTAGTCAAGTGTCT-GACACATTTAACATTTTAATAAAGTAAAATCTTACCTTCCCGTGTGTCAGTATGGG-ATTGTACAGATGTCGCAATGCGGTGGTGGTGAGAATAATGAAG- i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14800068 670 + 108792865 AAAATATTTCTATTCCATATTTATTTCCTGTCTAATGGCACTCTGCTCTCC----------TACAGATCTCAGCTTGTCTTATTTATATCTGTAAAAAATTATGCCAATG-----CTTCATTTTTCATGTCAATTACTGACATGTTTTCAAATCTTCACACGTTATTTCTGAAGATGTTGGTGCATCGAGGAAAGATGGTGTCATTGTAGTTAAAGAAG-T------TTTAAATAGGTTATGTTCAGTAAAATTCCAGAGCCTATTTCTCTGGAAGGCATAGAAATAGTGGGGTTATGCA----TAAACATAAAATAGCGCCTCAAGGCCTCGTGTACATAAAAGTGTTTATATCCTGGAAGATTCTAATTTACTGCTCAGT-AATGTTTCCTGGAGAGGAAAATAAGTGAGATAGATTGCTGAGCCTGTGATCATAACTCATAATATGAAGCAAAAACATAAAGACAAAATGAGAGACAATAGATAAACAAACTGATGTGAGTGAAGAACATCTGTGCAAC-AGTGTGTCTATGGCAGAGAGGAGGCCATGGGGCTACTTT-AGTGAGGAAGGAATTTG-TACACATTAGTCAAGTATCT-GACACAGTTAACATTTTAATAAAGAAAAACCTTATATACACATGTGTGAGAATGGG-ATTGTACAGATTTCACAATATAGTGGTGATGAGAATAATGAAG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27241201 675 - 28799539 AAAATATTTCTATTCCATATTTATTTCCTGTTTCATGGCACTCTGCTCTCCTTGGATCTAGTAAGGATCTCAGCTTGTTTTATTTATATCTGCAAAAAACTATGCCAATA-----CTTCATTTTTCATGTCAATTACTGACATGTTTTCAAATCTTCACAAGTTATTTCTGAAGATGTTGGTGCATTGAGGAAAGATGGTGTCATTGTAGTTGAAGAAG-T------TTTAAATAAGTTATGTTCAGTAAAATTCCACAGCCTGTTTCTCTGGAAGGCATAGAAATAGTGGTGTTATGCA----TAAACATAAAATAGCTCCACAAGGCCTTGTGTACATAAAAGTGTTTATATCCTGGAAGATTCTAATTTACTGCTCAGT-AATGTTTCCTGGAGAGGAAAATAGGTGAGATAGATTGCTGAGCCTGTGATAATAACTC-----ATGAAGCGAAAGCATAGAGACAAAATGAAAGACAATAGATAAACAAACTGATGTGAGTGAAGAATATCTGTGAAAC-AATGTGTCTATGGGAGAGAGGAGGCCATGGGGCTACTTT-TGTGAGGAAGGAATTTG-TACACATTAGTCAAGTATCT-GATACAGTTAACATTTTAATAAAGAAAAACCTTACATGCACATGTGTAAGAATGGG-ATTGTACAGATTTCACAATATAGTGGTGATGAGAATGAAGAAG- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 57276 680 - 3620821 AAAATATTTCTATTTCATATTTATTTCCTGTCTCGTGGCACTCTGCTCTCCTTGGATCTAGTAAGGATCTCAGCTTGTTTTATTTATATCTGCAAAAAACTATGCCGATG-----CTTCATTTTTCATGTCAATTACTGACATGTTTTCAAATCTTCACAAGTTATTTCTGAAGATGTTGGTGCATCGAGGAAAGATGGTGTCATTGTAGTAGAAGAAG-T------TTTAAATAGGTTATGTTCAGTAAAATTCCAGAGCCCGTTTCTCTGGAAGGCATAGAAATAGTGGTGTTATGCA----TAAACATAAAATAGCACCACAAGGCCTTGTGTACATAAAAGTGTTTATATCCTGGAAGATTCTAATTCACTGCTCAGT-AATGTTTCCTGGAGAGGAAAATAGGTGAGATAGATTGCTGAGCCTGTGATAATAACTCATAATATGAAGCGAAAGCATAGAAACAAAATGAGAGACAATAGATACACAAACTGATGTGAGTGAAGAACATCTGTGAAAC-AGTGTGTCTATGGGAGAGAGGAGGCCATGGGGCTACTTT-TGTGAGGAAGGAATTTG-TACACATTAGTCAAGTATCT-GACACAGTTAACATTTTAATAAAGAAAAACCTTATATACACATGTGTGAGAATGGG-ATTGTACAGATTTCACAATATAGTGGTGATGGGAATAAAGAAG- i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE948426v1 6894 663 + 45822 AAAATATTTTTGATGTGCATTTTGTTCTCATCTCATGGCTCTCTCTAACCTATGCATGTAGAGTAGGTCTAGACATATTAATTTCATAT---GAATAAATTAGGTCACTGAAGACTATCATTCTTTACATAAATTTTGGATGTTTATCCAAAGTTTTACTTGTGAGTTCTAAAGATATTGGTGCACTGAGGAAAGACCAATTTGTTGTAATTTCAACATTTGTTTCCTTTAAAGTGTTAACCATTAG-AGGTTTTTAAAGTTCTTCTTTCCAACATACACATGAGCAATATTTCCATGCATACTAAAACTTAAAATGGTTATATATAATTGT-TGTTAATAAAAATTTTCATACCCGAAGAAATGT--ACTTATTAATAAACAAATCTTTCATAGAAAACAAAGTACTTAGTAAAGATTGCTGAATGAATCAAAGTAATGC----TAAAAAATAAAGATGTAGAAACAAAATCAGAGGAGAGTG------AAAATTACTTGAGTGAA-------TGTATGAG-AGGGTATTTATGGTGGAGAGGAAGACATGTGATTGCTTTCTGTGAAGAA-AAATGTT-TATGAGTTTATCAAATTTGT--ATACAGTTTGTATTCTCATCATTGAAAACTTTATTTTT-------TTAGATTGGGTGTTGACTAGTTG----ACCATAGATGTTGTGGGAATAATCCATT i tarSyr2.KE948426v1 N 0 I 1626 a score=120699.000000 s hg38.chrUn_KI270746v1 22691 21 + 66486 AAACGAATGTAGAGGTCAAAG s panPan2.chr2A 89817472 21 + 114371477 AAATGAATGTGGAGGTCAAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 826738 21 - 998796 AAATGAATGTGGAGGTCAAAG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73213777 21 + 94967081 GAACGAATGTGGAGGTCAAAG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108469341 21 + 108979918 AAACGAATGTGGAGGTCAAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17621323 21 + 111193037 AAACGAATGTGGAGGTCAAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480011 21 - 11597128 AAACGAATGTGGAGGTCAAAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4978192 21 - 5626091 AAACGAATGTGGAGGTCAAAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16481256 21 + 107702431 AAACAAATGTGGAGATCAAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 251406 21 - 409142 AAACGAATGTGGAGGTCAAAG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14800738 21 + 108792865 AAATAAGTGTAAAGGGCTGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27241876 21 - 28799539 AAACAAATTTAAAGGGCAAAG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 57956 21 - 3620821 AAACAAATGTAAAGGGCAAAG i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE948426v1 7557 1626 + 45822 I a score=787812.000000 s hg38.chrUn_KI270746v1 22712 121 + 66486 AATCAAGTCCACCAATATGGATATTAGATTTATGAACG-AAAAAGAGTGTATGTCAAATTGGGCAGGTGTAAACAAAGAAAGCAGCTAGCTAGGTAATTTGGAGGTTTCTGATGAGGAGATT s panPan2.chr2A 89817493 121 + 114371477 AATCAAGTCCACCAATATGGATATTAGATTTATGAACG-AAAAAGAGTGTATGTCAAATTGGGCGGGTGTAAACAAAGAAAGCAGCTAGCTAGGTAATTTGGAAGTTTCTGATGAGGAGACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 826759 121 - 998796 AATCAAGTCCACCGATATGGATATTAGATTTATGAACG-AAAAAGAGTGTATGTCAAATTGGGCGGGTGTAAACAAAGAAAGCAGCTAGCTAGGTAATTTGGAGGTTTCTGATGAGGAGACT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73213798 121 + 94967081 AATCAAGTCCACCAATATGGATATTAGATTTATGAACG-AAAAAGTGTGTATGTCAAATTGGGCAGGTGTAAACAAAGAAAGCAGCTAGCTAGGTAATTTGGAGGTTTCTAATGAGGAGACT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108469362 121 + 108979918 AATGAAGTCCACCAATATGGACATTAGATTTATGAATG-AAAAGGAGTGTATGTCAAATTGGGCAGGAGTAAACAAAGAAAGCAGCTAGCTAGGTAGAATGGAGGTTTCTGATGAGGAGACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17621344 121 + 111193037 AATGAAGTCCACCAATATGGACATTAGATTTATGAATG-AAAAGGAGTGTATGTCAAATTGGGCAGGAGTAAACAAAGAAAGCAGCTAGCTAGGTAGAATGGAGGTTTCTGATGAGGAGACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480032 121 - 11597128 AATGAAGTCCACCAATATGGACATTAGATTTATGAATG-AAAAGGAGTGTATGTCAAATTGGGCAGGAGTAAACAAAGAAAGCAGCTAGCTAGGTAGAATGGAGGTTTCTGATGAGGAGACT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4978213 121 - 5626091 AATGAAGTCCACCAATATGGACATTAGATTTATGAATG-AAAAGGAGTGTATGTCAAATTGGGCAGGAGTAAACAAAGAAAGCAGCTAGCTAGGTAGAATGGAGGTTTCTGATGAGGAGACT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16481277 121 + 107702431 AATGAAGTCCACCAATATGGACATTAGATTTATGAATG-AAAAGGAGTGTATGTCAAATTGGGCAGGAGTAAACAAAGAAAGCAGCTAGCTAGGTAGAATGGAGGTTTCTGATGAGGAGACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 251427 121 - 409142 AATGAAGTCCACCAATATGGACATTAGATTTATGAATG-AAAAGGAGTGTATGTCAAATTGGGCAGGAGTAAACAAAGAAAGCAGCTAGCTAGGTAGAATGGAGGTTTCTGATGAGGAGACT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14800759 118 + 108792865 AATGGAGTCCACCAATATGGATATTAGATTAATGAATG-AAAAAGAGTGTATGCCAAATTGGGCAGGTATAAACAAAGAA---AGCCAGTGAGGTAATTTGGAGGTTTCTAATGAGAAGACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27241897 119 - 28799539 AATGAAGTCCACCAGTATGGATATTAGATTAATGAATGAAAAAAGAGTGTATGCCAAATTGGGCAGGTATAAACAAAGAA---AGCTAGCTAGGTAATTTCGAGGTTTCTGATGAGGAGACG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 57977 119 - 3620821 AATGAAGTCCACCAATATGGATATTAGATTAATGAATGAAAAAAGAGTGTATGCCAAATTGGGCAGGTATAAACAAAGAA---AGCTAGCTAGGTAATTTGGAGGTTTCTGATGAGGAGACG i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 997912 117 + 1054607 AATCCAGACCACATATGTAGAGATTACTTTTGCACAAG-GAGAGGG----ACAGTGAAGGGGGAGGGAGGGAGGAAAGAAAAAAGTTACCTAGGGAATTTTGGAATTGGTGATGAGGAAACT i tarSyr2.KE950423v1 n 1626 I 5 a score=742761.000000 s hg38.chrUn_KI270746v1 22833 116 + 66486 TGTGGGAAGTCACTTAATGGAAAGCAGAGGTTAGAAGGATGAAGGTGACCCACAGGATCTCATTTCTTCTCCCTAGAAGTTTTGCATATCAATGATACATGCTTCGTTCACATCAG s panPan2.chr2A 89817614 116 + 114371477 TGTGGGAAGTCACTTAATGGAAAGCAGAAGTTAGAAGGATGAGGGTGACCCACAGGGTCTCATTTCTCCTCCCTAGAAGTTTTGCACATCAGTGATACATGCTTCGTTCACATCGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 826880 116 - 998796 TGTGGGAAGTCACTTAATGGAAAGCAGAAGTTAGAAGGATGAGGGTGACCCACAGGGTCTCATTTCTCCTCCCTAGAAGTTTTGCACATCAGTGATACATGCTTTGTTCACATCGG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73213919 116 + 94967081 TGTGGGAAGTCACTTAATGGAAAGCAGAAGTTGGAAGGATGAGGGTGACCCACAGGGTCTCATTTCTCCTCCCTAGAAGTTTTGCACATCAATGATACATGCTTCGTTCACATCAG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108469483 116 + 108979918 GGTGGGAAGTCACTTAATTGAAAGCAGAAGTTAGAAGGATGAAGGTGACCCACAGGGTCTCATTTCTTCTCCGTAGAAGTTTTGCATATCAATGATATGTGCTTCGTTCACATCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17621465 116 + 111193037 GGTGGGAAGTCACTTAATTGAAAGCAGAAGTTAGAAGGATGAAGGTGACCCACAGGGTCTCATTTCTTCTCTGTAGAAGTTTTGCATATCAATGATATGTGCTTCGTTCACATCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480153 116 - 11597128 GGTGGGAAGTCACTTAATTGAAAGCAGAAGTTAGAAGGATGAGGGTGACCCACAGGGTCTCATTTCTTCTCCGTAGAAGTTTTGCATATCAATGACATGTGCTTCGTTCACATCAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4978334 116 - 5626091 GGTGGGAAGTCACTTAATTGAAAGCAGAAGTTAGAAGGATGAGGGTGACCCACAGGGTCTCATTTCTTCTCCGTAGAAGTTTTGCATATCAATGATATGTGCTTCATTCACATCAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16481398 116 + 107702431 TCTGGGAAGTCACTTAATTGAAAGCAGAAGTTAGAAGGATGAGGGTGACCCACAGGGTCTCATTTCTTCTCCGTAGAAGTTTTGCACATCAATGATATGTGCTTCATTCACATCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 251548 116 - 409142 GGTGGGAAGTCACTTAATTGAAAGCAGAAGTTAGAAGGATGAGGGTGACCCACAGGGTCTCATTTCTTCTCCGTAGAAGTTTTGCATATCAATGATATGTGCTTCATTCCCATCAG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14800877 116 + 108792865 TATGGGAAGTCACTTTACGGAAAGCAGAAGTTAGAAGGAGGAGGGTGACTGACAGGATTCCATTTCTTCTCCCTGGAAGTTTTGCACATCAATGATACGTGCTTTGTTCACATCAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27242016 116 - 28799539 TGTGGGAAGTCACTTTATGGAAAGCAGAAGTTAGAAGGATGAGGGTTACCCTCAGGATTCAATTTCTTCTCCCTAGAAGTTTTGCACATCAATGATATGTGCTTTGTTCACATCAG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 58096 116 - 3620821 TGTGGGAAGTCACTTTATGGGAAGCAGAAGTTAGAAGGATGAGGGTGACCCACAGGATTCCATTTCTTCTCCCTAGAAGTTTTGGACATCAATGATATGTGCTTTGTTCACATCAG i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE950423v1 998029 5 + 1054607 I a score=16562.000000 s hg38.chrUn_KI270746v1 22949 2 + 66486 TT s panPan2.chr2A 89817730 2 + 114371477 TT i panPan2.chr2A C 0 I 34 s gorGor5.CYUI01015730v1 826996 2 - 998796 TT i gorGor5.CYUI01015730v1 C 0 I 37 s nomLeu3.chr14 73214035 2 + 94967081 TT i nomLeu3.chr14 C 0 I 37 s rheMac8.chr13 108469599 2 + 108979918 TT i rheMac8.chr13 C 0 I 52 s macFas5.chr13 17621581 2 + 111193037 TT i macFas5.chr13 C 0 I 52 s macNem1.NW_012014799v1 10480269 2 - 11597128 TT i macNem1.NW_012014799v1 C 0 I 52 s cerAty1.NW_012001187v1 4978450 2 - 5626091 TT i cerAty1.NW_012001187v1 C 0 I 52 s papAnu3.chr13 104203226 2 + 128036923 TT i papAnu3.chr13 N 0 I 29540 s chlSab2.chr14 16481514 2 + 107702431 TT i chlSab2.chr14 C 0 I 52 s manLeu1.NW_012101154v1 251664 2 - 409142 TT i manLeu1.NW_012101154v1 C 0 I 54 s calJac3.chr14 14800993 2 + 108792865 TT i calJac3.chr14 C 0 I 34 s saiBol1.JH378124 27242132 2 - 28799539 TT i saiBol1.JH378124 C 0 I 35 s cebCap1.NW_016107537v1 58212 2 - 3620821 TT i cebCap1.NW_016107537v1 C 0 I 53 e tarSyr2.KE950423v1 998029 5 + 1054607 I a score=31571.000000 s hg38.chrUn_KI270746v1 22951 10 + 66486 TTT---------CTTTTTT s panPan2.chr2A 89817766 10 + 114371477 GTT---------TTTTTTT i panPan2.chr2A I 34 C 0 s gorGor5.CYUI01015730v1 827035 10 - 998796 TTT---------TTTTTTT i gorGor5.CYUI01015730v1 I 37 C 0 s nomLeu3.chr14 73214074 19 + 94967081 tttgttttttggttttttt i nomLeu3.chr14 I 37 C 0 s rheMac8.chr13 108469653 9 + 108979918 -TT---------TCTTATT i rheMac8.chr13 I 52 C 0 s macFas5.chr13 17621635 9 + 111193037 -TT---------TCTTATT i macFas5.chr13 I 52 C 0 s macNem1.NW_012014799v1 10480323 9 - 11597128 -TT---------TCTTATT i macNem1.NW_012014799v1 I 52 C 0 s cerAty1.NW_012001187v1 4978504 9 - 5626091 -tt---------tcttttt i cerAty1.NW_012001187v1 I 52 C 0 s chlSab2.chr14 16481568 9 + 107702431 -tt---------tctttTT i chlSab2.chr14 I 52 C 0 s manLeu1.NW_012101154v1 251720 9 - 409142 -tt---------tcttttt i manLeu1.NW_012101154v1 I 54 C 0 s calJac3.chr14 14801029 10 + 108792865 ATT---------ATTTTTT i calJac3.chr14 I 34 I 5 s saiBol1.JH378124 27242169 10 - 28799539 TTT---------TTTTTTT i saiBol1.JH378124 I 35 I 5 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998029 5 + 1054607 I e cebCap1.NW_016107537v1 58214 53 - 3620821 I a score=725512.000000 s hg38.chrUn_KI270746v1 22961 120 + 66486 GGAAATCTGTGTTTGCTGAGGTAGTTATTTTGTGAAAGAACCTGAGAGATCCCTATGGTATATCATGTGAAACTAGATTTAGATA-AAAGGAATCAAAGAATGCATTTTTAGAGTACTAAA s panPan2.chr2A 89817776 119 + 114371477 TGAAAGCTGTGTTTGCTGAGGTAGTTATTTCATAAAAGAACCTGAGAGACCCCTATGGTATATCATATGAAATTAGATTTAGAAA-AAAGGAAT-AAAGAATGCATTTTTAGAGTACTAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827045 120 - 998796 TGAAAGCTGTGTTTGCTGAGGTAGCTATTTTGTAAAAGAACCTGAGAGACCCCTATGGTATATCATATGAAACTAGATTTAGAAA-AAAGGAATCAAAGAATGCATTTTTAGAGTACTAAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73214093 120 + 94967081 ttAAAGCTGTGTTTGCTGAGGTAGTTATTTCGTAAAAGAACCTGAGAGACCCCTATGGTATATCATATGAAACTAGATTTAGAAA-AAAGGAATCAAAGAATGCATTTTTAGAGTACTAAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108469662 119 + 108979918 AGGAAGCTGTGTTTGCTGA-GTAGTTATTTCATAAAAGAACCTGAGAGACCCCTATAGTATATCATATAAAACTAGATTTAGAAA-AAAGGAATCAAAGAATACATTTTTAGAGTATTAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17621644 119 + 111193037 AGGAAGCTGTGTTTGCTGA-GTAGTTATTTCATAAAAGAACCTGAGAGACCCCTATAGTATATCATATAAAACTAGATTTAGAAA-AAAGGAATCAAAGAATACATTTTTAGAGTATTAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480332 119 - 11597128 AGGAAGCTGTGTTTGCTGA-GTAGTTATTTCATAAAAGAACCTGAGAGACCCCTATAGTATATCATATAAAACTAGATTTAGAAA-AAAGGAATCAAAGAATACATTTTTAGAGTATTAAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4978513 119 - 5626091 AGGAAGCTGTGTTTGCTGA-GTAGTTATTTCATAAAAGAACCTGAGAGACCCCTATAGTATATCATATAAAACTAGATTTAGAAA-AAAGGAATCAAAGAATACATTTTTAGAGTATTAAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16481577 119 + 107702431 AGGAAGCTGTGTTTGCTGA-GTAGTTATTTCATAAAAGAACCTGAGAGACCCCTGTAGTATATCATATAAAACTAGATTTAGAAA-AAATGAATCAAAGAATACATTTTTAGAGTATTAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 251729 119 - 409142 AGGAAGCTGTGTTTGCTGA-GTAGTTATTTCATAAAAGAACCTGAGAGACCCCTATAGTATATCATATAAAACTAGATTTAGAAA-AAAGGAATCAAAGAATACATTTTTAGAGTATTAAA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14801044 121 + 108792865 GGAAAGCTGTGTTTGCTGAGGTAGTTATTTCATAAAAGGACCTGAGAAGCCCCTATGGTATATAATATCAAACTAGCTTTAGAAACAAAGGAATCAAAGAATGCATTTCTTGAGTACTAAA i calJac3.chr14 I 5 C 0 s saiBol1.JH378124 27242184 121 - 28799539 GGAAAGCTGTGTTTGCTGAGGTAGTTATTTCATAAAAGGACCTGAGAAGCCCCTATGGTATACAATATCAAACTAGCTTTAGAAACAAAGGAATCAAAGAATGTATTTCTTGAGTACTAAA i saiBol1.JH378124 I 5 C 0 s cebCap1.NW_016107537v1 58267 121 - 3620821 GGAAAGCTGTGTTTGCTTAGGTAGTTATTTCATAAAAGGACCTGAGATGCCCCTATGGTATATAATATCAAACTAGCTTTAGAAACAAAGGAATCAAAGAATGTATTTCTTGAGCACTAAA i cebCap1.NW_016107537v1 I 53 I 289 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998029 5 + 1054607 I a score=134659.000000 s hg38.chrUn_KI270746v1 23081 33 + 66486 CAGATAACTGCCAATAATGGTGACAATCAT---G--------------------AC s panPan2.chr2A 89817895 33 + 114371477 CAGATAACTGCCAATAATCATGACAATCAT---G--------------------AC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827165 33 - 998796 CAGATAACTGCCAATAATCATGACAATCAT---G--------------------AC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73214213 53 + 94967081 CAGATAACTGCCAATAATCATGACAATCAT---Gacacacacacacacacacacac i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108469781 33 + 108979918 TGGATAACTGCCAATAATCATGGCAATCAT---G--------------------AC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17621763 33 + 111193037 TGGATAACTGCCAATAATCATGGCAATCAT---G--------------------AC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480451 33 - 11597128 TGGATAACTGCCAATAATCATGGCAATCAT---G--------------------AC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4978632 33 - 5626091 TGGATAACTGCCAATAATCATGGCAATCAT---G--------------------AC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16481696 33 + 107702431 TGGATAACTGCCAATAATCATGGCAATCAT---G--------------------AC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 251848 33 - 409142 TGGATAACTGCCAATAATCATGGCAATCAT---G--------------------AC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14801165 33 + 108792865 AGGGCAACTTCCAATAATCTTGGCAATCATTac----------------------- i calJac3.chr14 C 0 I 143 s saiBol1.JH378124 27242305 30 - 28799539 AGGGCAACTTCCAATAATCTTGGCAATCAT-------------------------- i saiBol1.JH378124 C 0 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998029 5 + 1054607 I e cebCap1.NW_016107537v1 58388 289 - 3620821 I a score=50767.000000 s hg38.chrUn_KI270746v1 23114 18 + 66486 --ATATGTATATATAT--GTAT s panPan2.chr2A 89817928 20 + 114371477 --atatatatatatatatgcat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827198 18 - 998796 --ATATATATATATAT--GCAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73214266 18 + 94967081 --acacacaTATATAT--GCAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108469814 16 + 108979918 --ACATATATATAT----GCAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17621796 16 + 111193037 --ACATATATATAT----GCAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480484 16 - 11597128 --ACATATATATAT----GCAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4978665 16 - 5626091 --ATATATATATAT----GCAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16481729 14 + 107702431 ----ATATATATAT----GCAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 251881 16 - 409142 --ATATATATATAT----GCAT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14801341 18 + 108792865 ataagaatttatat----atat i calJac3.chr14 I 143 C 0 s saiBol1.JH378124 27242335 17 - 28799539 -TATATATATATAT----GTAT i saiBol1.JH378124 C 0 M 282 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998029 5 + 1054607 I e cebCap1.NW_016107537v1 58388 289 - 3620821 I a score=54610.000000 s hg38.chrUn_KI270746v1 23132 14 + 66486 --TATGTCGTATTGGT s panPan2.chr2A 89817948 14 + 114371477 --tatgtcatatTGGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827216 14 - 998796 --TATGTCATATTGGT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73214284 14 + 94967081 --TATGTCATATTGGT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108469830 14 + 108979918 --TATGTCATATTGGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17621812 14 + 111193037 --TATGTCATATTGGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480500 14 - 11597128 --TATGTCATATTGGT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4978681 14 - 5626091 --TATGTCATATTGGT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16481743 14 + 107702431 --TATGTCATATTGGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 251897 14 - 409142 --TATGTCATATTGGT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14801359 10 + 108792865 aatat---atatt--- i calJac3.chr14 C 0 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998029 5 + 1054607 I e cebCap1.NW_016107537v1 58388 289 - 3620821 I e saiBol1.JH378124 27242352 282 - 28799539 M a score=83028.000000 s hg38.chrUn_KI270746v1 23146 19 + 66486 TGGTTATTTATAAGAAAAG s panPan2.chr2A 89817962 19 + 114371477 TGGTTATTTATAAGGAAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827230 19 - 998796 TGGTTATTTATAAGAAAAG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73214298 19 + 94967081 TGGGTATTTATAAGAAAAG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108469844 19 + 108979918 TGGTTATTTATAAGAAAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17621826 19 + 111193037 TGGTTATTTATAAGAAAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480514 14 - 11597128 TGGTTATTTAT-----AAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4978695 19 - 5626091 TGGTTATTTATAAGAAAAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16481757 19 + 107702431 TGGTTATTTATAAGAAAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 251911 19 - 409142 TGGTTATTTATAAGAAAAG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14801369 17 + 108792865 TGGTTATTAATAAGAAA-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27242641 17 - 28799539 TGGTTATTAATAAGAAG-- i saiBol1.JH378124 M 282 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998029 5 + 1054607 I e cebCap1.NW_016107537v1 58388 289 - 3620821 I a score=94737.000000 s hg38.chrUn_KI270746v1 23165 16 + 66486 AAGTCTCTAGTGATTT s panPan2.chr2A 89817981 16 + 114371477 AAGTCTCTAGTGATTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827249 16 - 998796 AAGTCTCTAGTGATTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73214317 16 + 94967081 AAGTCTGTAGTGATTT i nomLeu3.chr14 C 0 I 2524 s rheMac8.chr13 108469863 16 + 108979918 AAGTCTCTAGTGATTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17621845 16 + 111193037 AAGTCTCTAGTGATTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480528 14 - 11597128 AAGTCTCTAGTG--TT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4978714 16 - 5626091 AAGTCTCTAGTGATTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16481776 16 + 107702431 AAGTCTCTAGTGATTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 251930 16 - 409142 AAGTCTCTAGTGATTT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14801386 16 + 108792865 AGAAGTCTGGTGATTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27242658 16 - 28799539 AAGTCTCTGGTGATTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 58677 16 - 3620821 AAGTCTCTGGTGATTT i cebCap1.NW_016107537v1 I 289 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998029 5 + 1054607 I a score=212274.000000 s hg38.chrUn_KI270746v1 23181 34 + 66486 AGAAACTTTGTTTAGTTTATTTTCATAGGAATCT s panPan2.chr2A 89817997 34 + 114371477 AGAAACTTTGTTTAGTTTATTTTCATAGGAATCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827265 34 - 998796 AGAAACTTTGTTTAGTTTATTTTCATAGGAATCT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73216857 34 + 94967081 agaaaCTTTGTTTAGTTTATTTTCATAGGAATCT i nomLeu3.chr14 I 2524 C 0 s rheMac8.chr13 108469879 34 + 108979918 AGAAACTTTGTTTAGTTTATTTTCATAAGAATCT i rheMac8.chr13 C 0 T 35357 s macFas5.chr13 17621861 34 + 111193037 AGAAACTTTGTTTAGTTTATTTTCATAAGAATCT i macFas5.chr13 C 0 I 6 s macNem1.NW_012014799v1 10480542 34 - 11597128 AGAAACTTTGTTTAGTTTATTTTCATAAGAATCT i macNem1.NW_012014799v1 C 0 I 6 s cerAty1.NW_012001187v1 4978730 34 - 5626091 AGAAACTTTGCTTAGTTTATTTTCATAGGAATCT i cerAty1.NW_012001187v1 C 0 I 6 s chlSab2.chr14 16481792 34 + 107702431 AGAAACTTTGTTTAGTTTATTTTCATAGGAATCT i chlSab2.chr14 C 0 I 6 s manLeu1.NW_012101154v1 251946 34 - 409142 AGAAACTTTGCTTAGTTTATTTTCATAGGAATCT i manLeu1.NW_012101154v1 C 0 I 6 s calJac3.chr14 14801402 34 + 108792865 AAATATTTTGTTTAATTTGTTTTCATGGGAATCG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27242674 34 - 28799539 AAAGATTTTGTTTAATTTGTTTTCATGGGAATCT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 58693 34 - 3620821 AAAGATTTTGTTTAATTTGTTTTCATGGGAGTCT i cebCap1.NW_016107537v1 C 0 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998029 5 + 1054607 I a score=885532.000000 s hg38.chrUn_KI270746v1 23215 156 + 66486 GATTACACATTATTTCACTGATGTGTATGTTTTTGCAAAAGTGGACGAAGAGACGGTGAGAAGGCCGAACTGCTGAATCCAGGAAATGTAAAAACATCAGGAGTCTTCATGAGCATAAACAAAATGATTTTTTAAA-TTATAACTCTTAGATTAAGT s panPan2.chr2A 89818031 156 + 114371477 GATTACACATTATTTCATTGACGTGTATGTTTTTGCAAAAGTGGACGAAGAGACAGTGAGAAGGCCAAACTGCTGAATCCAGGAAATGTAAAAACATCAGGAGTCTTCATGAGTATAAAGAAAATGATTTTTTAAA-TTATGACTCTAAGATTAAGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827299 156 - 998796 GATTACACATTATTTCATTGACGTGTATGTTTTTGCAAAAGTGGACGAAGAGACAGTGAGAAGGCCAAACTACTGAATCCAGGAAATGTAAAAACATCAGGAGTCTTCATGAGTATAAAGAAAATGATTTTTTAAA-TTATGACTCTAAGATTAAGT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73216891 156 + 94967081 GATTACACATTATTTCATTGACGTGTATGTTTTTGCAAAAGTGGACGAAGAGACAGTGAGAAGGCCGAACTGCTGAATCCAGGAAATGTAAAAACCTCAGGAGTCTTCATGAGTATAAAGAAAATGATTTTTTAAA-TTATGACTCTAAGATTAAGT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108434556 156 + 108979918 GATTATGCATTATTTCTTTGATGTCTATGTTTTTGCAAAAGTGGAAAAAGAGATGGCAAAAGAGCTGAACTGCTGAATCCAGGAAATGTAGGAATATTAGGAGCCTTCATGAGTACAAAGAAAATTATTTTTAAAA-TTACGACTCTAAGTATAACT i rheMac8.chr13 T 35357 C 0 s macFas5.chr13 17621901 156 + 111193037 ATCTACACATTATTTCATTGATGTGTATGTTTTGGCAAAAGTGGACGAAGAGACAGGGAGAAGGCCAAACTGCTGAATCCAGGATATGTAAAAATATCAGGAGCCTTCATGAGTATAAAGAAAATGATTTTTTAAA-TTATGACTCTAAGATTAAGT i macFas5.chr13 I 6 C 0 s macNem1.NW_012014799v1 10480582 156 - 11597128 ATCTACACATTATTTCACTGATGTGTATGTTTTGGCAAAAGTGGACGAAGAGACAGGGAGAAGGCCAAACTGCTGAATCCAGGATATGTAAAAATATCAGGAGCCTTCATGAGTATAAAGAAAATGATTTTTTAAA-TTATGACTCTAAGATTAAGT i macNem1.NW_012014799v1 I 6 C 0 s cerAty1.NW_012001187v1 4978770 156 - 5626091 ATCTACACATTATTTCATTGATGTGTATGTTTTGGCGAAAGTGGACGAAGAGACAGGGAGAAGGCCAAACTGCTGAATCCAGGATATGTAAAAATATCAGGAGCCTTCATGAGTATAAAGAAAATGATTTTTTAAA-TTATGACTCTAAGATTAAGT i cerAty1.NW_012001187v1 I 6 C 0 s chlSab2.chr14 16481832 156 + 107702431 ATCTACACATTATTTCATTGATGTGTATGTTTTGGCGAAAGTGGATGAAGAGACAGGGAGAAGGCCAAACTGCTGAATCCAGGATATGTAAAAATATCAGGAGCCTTCATGAGTATAAAGAAAATGATTTTTTAAA-TTATGACTCTAAGATTAAGT i chlSab2.chr14 I 6 C 0 s manLeu1.NW_012101154v1 251986 156 - 409142 ATCTACACATTATTTCATTGATGTGTATGTTTTGGCGAAAGTGGACGAAGAGACAGGGAGAAGGCCAAACTGCTGAATCCAGGATATGTAAAAATATCAGGAGCCTTCATGAGTATAAAGAAAATGATTTTTTAAA-TTATGACTCTAAGATTAAGT i manLeu1.NW_012101154v1 I 6 C 0 s calJac3.chr14 14801436 154 + 108792865 GATTACACATTATTCCTTTGACGTGTAGGTTTTGGCAAAAGTGGGTGAAGAGATGGCAAGAAGGCTGAACTGCTGAATTTAGGAAATGTATTAATATCAGGAGACTTCATGAGTATAAAGAAAATGATTTTTGAAA-TTAAGA--CTAAGTATAAGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27242708 151 - 28799539 GATTACACGTTACTTCTTTGACGTGTATGTTTTGGCAAAAGTTGGTGAAGAGATGGGAAGAAGGCTGAACTGCTGAATTCAGGAAATTTAGGAATATC---AGACTTCATGAGTATAAAGAAAGTGATTTTTGAAA-TTAAGA--CTAAGTACAAGT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 58727 152 - 3620821 GATTGCACATTATTTCTTTGATGCGTATGTTTTGGCAAAAGTGGGTGAAGAGATGGGAAGAAGGCTAAACTGCTGAATCCAGGAAACGTAGGAATTTC---AGACTTCATGAGTATAAAGAAAGTGATTTTTGAAATTTAAGA--CTAAGTATAAGT i cebCap1.NW_016107537v1 C 0 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998029 5 + 1054607 I a score=432367.000000 s hg38.chrUn_KI270746v1 23371 71 + 66486 GAACTCACTTCAGATGCA-TTCAGAATATTTGCA-TAAAGGATGATTTGAT-TTTTGGCTGTTCCAGGAACTAC s panPan2.chr2A 89818187 71 + 114371477 GAACTCACTTCAGATGCA-TTTAGAATATTTGCG-TAAAGGATGATTTGAT-TTTTGGCTGCTCCAGGAATTAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827455 71 - 998796 GAACTCACTTCAGATGCA-TTTAGAATATTTGCG-TAAAGGATGACTTGAT-TTTTGGCTGCTCCAGGAACTAC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73217047 71 + 94967081 GAACTCACTTCAGATGCA-TTTAGAATATTTGCG-TAAAGGATGATTTGAT-TTTTGGCTGCTCCAGGAACTAC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108434712 71 + 108979918 GAACTCACTTCAAATGCATTTTAGAATATTTGTG-TAAAGGATGATTTGA--TTTTGGCTGCTCCAGAAACTAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17622057 70 + 111193037 GGACTCACTTCAGATGCA-TTTAGAATATTTGCG-TAAAGGATGATTTGA--TTTTGGCTGCTCCAGGAACTAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480738 70 - 11597128 GGACTCACTTCAGATGCA-TTTAGAATATTTGCG-TAAAGGATGATTTGA--TTTTGGCTGCTCCAGGAACTAC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4978926 70 - 5626091 GGACTCACTTCAGATGCA-TTTAGAATATTTGCG-TAAAGGATGATTTGA--TTTTGGCTGCTCCAGGAACTAC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16481988 59 + 107702431 G-----------GATGCA-TTTAGAATATTTGCG-TAAAGGATGATTTGA--TTTTGGCTGCTCCAGGAACTAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 252142 70 - 409142 GGACTCACTTCAGATGCA-TTTAGAATATTTGCG-TAAAGGATGATTTGA--TTTTGGCTGCTCCAGGAACTAC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14801590 65 + 108792865 GAACTTATTTCAGATGCA-TTTAGAATATTTGCA-TAAAAGATGA-------TTTTGGCTGCTCCAGGAACTAC i calJac3.chr14 C 0 I 2087 s saiBol1.JH378124 27242859 65 - 28799539 GAACTTATTTCAGATGCA-TTTAGAATATTTGCA-TAAAAGATGA-------TTTTGGCTGCTCCAGGAACTAC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 58879 65 - 3620821 GAACTTATTTCAGATGCA-TTTAGAATATTTGCA-TAAAAGATGA-------TTTTGGCTGCTCCAGGAACTAC i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 998034 73 + 1054607 GAACTCTCTTCAGATGGC-TGCAGTAGATTCGCACTTAAACACAATATTATATTATTGCTGATCCAGAGGTGAT i tarSyr2.KE950423v1 I 5 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I a score=1105569.000000 s hg38.chrUn_KI270746v1 23442 174 + 66486 TGGAAGCAGGAAACAGTGATAGAGTTGGGATAAACCACAGTGACTCATTATTCCTCTTTGTTACTATTGGGCACCAGAGGTATATGTTTTGTTGATATTGGTTATTCAAATGAGATAAACGTGAATATGCATACATTGGCTTTGTTTTTCAAGGAGCTA----TTGGATAAAATAGCA s panPan2.chr2A 89818258 178 + 114371477 TGGAAGCAGGAAAGAGTGATAGAATTGGGATAAACCACAGTGACTCATTACTCCTCTTTGTTACTATTGGGCACCAGAGGTATATGTTTTGTTGATATTAGTTATTCAAATGAGATAAACGTGAATATGCATACATTGGCTCTGTTTTTCAAGGAGCTAACTATTGGATAAAATAGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827526 178 - 998796 TGGAAGCAGGAAAGAGTGATAGAATTGGGATAAACCACAGTGACTCATTACTCCTCTTTGTTACTATTGGGCACCAGAGGTATATGTTTTGTTGATATTAGTTATTCAAATGAGATAAACGTGAATATGCATACATTGGCTCTGTTTTTCAAGGAGCTAACTATTGGATAAAATAGCA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73217118 178 + 94967081 TGGAAGCAGGAAAGAGTGATAGAATTGGGATAAACCACAGTGACTCATTACTCCTCTTTGTTACTATTGGGCACCAGAGCTATATGTTTTGTTGATATTAGTTATTCAAATGAGATAAACATGAATATACATACATTGGCTTTGTTTTTCAAGCAGCTAACTATTGGATAAAATAGCA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108434783 177 + 108979918 TAGAGGAAGGGAAGGGT-ATAGAATTCAGATAAACCACAGTGACTCATTACTCCTCTTTGTTACTATTGGGAATCAGAGACATAGATTTTGCTGATATTAATTATTCAAATGAAATAAACATGAATATGCATACATTGGCTTTGTTCTTCAAGGAGCTAACTTTTGGATACAATAGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17622127 178 + 111193037 TGGAAGCAGGAAAGAATGATGGAATTGGGATAAACCACAGTGACTCATTACTCCTCCTTGTTACTACTGGGCGTCAGAGGTATATGTTTTGTTGATATTAGTTATTCAAATGAGATAAACGTGAATATGCATACATTGGCTTTGTTTTTCAAGAAGCTAACTATTGGATAAAATAGCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480808 178 - 11597128 TGGAAGCAGGAAAGAATGATGGAATTGGGATAAACCACAGTGACTTATTACTCCTCCTTGTTACTACTGGGCGTCAGAAGTATATGTTTTGTTGATATTAGTTATTCAAATGAGATAAACGTGAATATGCATACATTGGCTTTGTTTTTCAAGAAGCTAACTATTGGATAAAATAGCT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4978996 178 - 5626091 TGGAAGCAGGAAAGAATGATGGAATTGGGATAAACCACAGTGACTCATTACTCCTCCTTGTTACTACTGGGCGTCAGAGGTATATGTTTTGTTGATATTAGTTATTCAAATGAGATAAACGTGAATATGCATACATTGGCTTTGTTTTTCAAGAAGCTAACTATTGGATAAAATAGCT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16482047 178 + 107702431 TGGAAGCAGGAAAGAATGATGGAATTGGGATAAACCACAGTGACTCATTACTCCTCCTTGTTACTACTGGGCGTCAGAGGTATATGTTTTGTTGATATTAGTTATTCAAATGAGATAAACGTGAATATGCATACATTGGCTTTGTTTTTCAAGAAGCTAACTATTGGATAAAATAGCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 252212 178 - 409142 TGGAAGCAGGAAAGAATGATGGAATTGGGATAAACCACAGTGACTCATTACTCCTCCTTGTTACTACTGGGCGTCAGAGGTATATGTTTTGTTGATATTAGTTATTCAAATGAGATAAACGTGAATATGCATACATTGGCTTTGTTTTTCAAGAAGCTAACTATTGGATAAAATAGCT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14803742 175 + 108792865 TGGAAGCAGGAAACAATGCTAGAATTGAGATAAACCACAGTGACTCATTACTCCTCTTTGTTACTGTTGGGCAACAGAGATGTATATTTTGT---TATTAGTTATTTAAATGAGATAATCATGAATATGCATACATTGGCTTTGTTTTCCAAAGAGATAACTTTTGGATGAAATAGCA i calJac3.chr14 I 2087 C 0 s saiBol1.JH378124 27242924 176 - 28799539 TGGTAACAGGAAAGAGTGCTAGAATTGGGCTAAACCACACTGACTCATTGCTCCTCTTTGTTACTGTT-GGCATCAGGGACATATGTTTTATTGATATTTGTTATTCAAATGAGTTAAATGTGAATATGCACACATT-GCCTTGTTTTTCAAGGCAATAACTTTTGGATGAAATAGCA i saiBol1.JH378124 C 0 I 4082 s cebCap1.NW_016107537v1 58944 173 - 3620821 TGGAAACAGGAAAGAGTGCTAGAATTGGGCTAAACCACACTGACTCATTGCTCCTC--TGTTAC-GTT-GGTATCAGAGATGTATGTTTTATTGATATTAGTTATTCAAATGAGTTAAATGTGAATATGCACATATT-GCCTTGTTTTTCAAGGCAATAACTTTTGGATGAAATAGCA i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 998107 157 + 1054607 -CAGAACAGAAGGGAAAGGTAGAATTGGGATATAACACA--AACTCATTTCTCCTCTGCATAACTGGCAGGTATAAAAGAGATAAGCTGCACTGATAGTAGTTAATCAAATGAAATTCATTTGAACATAGATACATTAGCTGTTTTGTTT------------------TAAGAAAGCT i tarSyr2.KE950423v1 C 0 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I a score=172621.000000 s hg38.chrUn_KI270746v1 23616 35 + 66486 ACTTAATAAAAATTATCTAGAGAATAACATGATAA- s panPan2.chr2A 89818436 35 + 114371477 ATTTAATAAAAATTCTCTAGAGAATAACATGATAC- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827704 35 - 998796 ATTTAATAAAAATTCTCTAGAGAATAACATGATAC- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73217296 35 + 94967081 ATTTAATAAAAATTCTCTAGAGAATAACATGATAC- i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108434960 35 + 108979918 ATTTAATGAAAATTCCTTAGAGAATAACATGATAC- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17622305 35 + 111193037 ATTTAATAAAAATTCTCTAGAGAATAACATGAGAC- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10480986 35 - 11597128 ATTTAATAAAAATTCTCTAGAGAATAACATGAGAC- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4979174 35 - 5626091 ATTTAATAAAAATTCTCTAGAGAATAACATGAGAC- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16482225 35 + 107702431 ATTTGATAAAAATTCTCTAGAGAATAGCATGAGAC- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 252390 35 - 409142 ATTTAATAAAAATTCTCTAGAGAATAACATGAGAC- i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14803917 26 + 108792865 ATATGAGGAAAATGCTTTAG---------TCATAT- i calJac3.chr14 C 0 I 1 s saiBol1.JH378124 27247182 35 - 28799539 ATTTAATGAAAATTCTGTAGAGAATAACATGGTAC- i saiBol1.JH378124 I 4082 I 1 s cebCap1.NW_016107537v1 59117 35 - 3620821 ATTTGAGGAAAATGCTTTAGAGAATAACATGATAA- i cebCap1.NW_016107537v1 C 0 I 6642 s tarSyr2.KE950423v1 998264 13 + 1054607 -----------ATTTTT------------TGATATA i tarSyr2.KE950423v1 C 0 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I a score=280359.000000 s hg38.chrUn_KI270746v1 23651 55 + 66486 TTTAACCAGACT-ATTTTAGAAGTGAAAATAATGTTGA---ATTCATTACTTGACTCCC s panPan2.chr2A 89818471 55 + 114371477 TTCAACCAGACT-ATTTTAGAAGTGAAAATAATGTTGA---ATTCTTTACTTGACTCCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827739 55 - 998796 TCCAACCAGACT-ATTTTAGAAGTGAAAATAATGTTGA---ATTCTTTACTTGACTCCC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73217331 55 + 94967081 TTCAACCAGACT-ATTTTAGAAGTGAAAATAATGTTGA---ATTCTTTACTTGACTCCC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108434995 51 + 108979918 TTC----AGACT-ATTTTAGAAACAAAAATAATGTTGA---ATTCATTAATTGACTCCT i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17622340 55 + 111193037 TTCAACGAGACT-ATTTTGGAAATGAAAATAATGTTGA---ATTCATTACTTGACTCCC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10481021 55 - 11597128 TTCAACCAGACT-ATTTTGGAAATGAAAATAATGTTGA---ATTCATTACTTGACTCCC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4979209 55 - 5626091 TTCAACCAGACT-ATTTTAGAAATGAAAATAATGTTGA---ATTCATTACTTGACTCCC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16482260 55 + 107702431 TTCAACCAGACT-ATTTTAGAAATGAAAATAATGTTGA---ATTCATTACTTGACTCCC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 252425 55 - 409142 TTCAACCAGACT-ATTTTAGAAATGAAAATAATGTTGA---ATTCATTACTTGACTCCC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14803944 55 + 108792865 TCAAACCAGACT-ATTTTAGAAACAAAAATAATGCTGA---ATTCATTAATTGACTCTT i calJac3.chr14 I 1 I 2 s saiBol1.JH378124 27247218 55 - 28799539 CCAGATAAGACT-ATTTTAGAAACAAAACTAATGTTGA---ATTCATTATTCAAATCCT i saiBol1.JH378124 I 1 I 1 s tarSyr2.KE950423v1 998277 52 + 1054607 CTAAACCAAACCAATTTTAATAACAAAAATAAAGTTAATACCTTCAATATTA------- i tarSyr2.KE950423v1 C 0 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I e cebCap1.NW_016107537v1 59152 6642 - 3620821 I a score=421055.000000 s hg38.chrUn_KI270746v1 23706 67 + 66486 AAATGGTTATTTTCAAGGAATATTGGCGTGATTTCCAGATGTA-AAAGCTTATTCA----------TATCT--AATGCTT s panPan2.chr2A 89818526 67 + 114371477 AAATGGTTATTTTCAATGAATATTGGAGTGATTTCCAGATGTA-AAAGCTTATTCG----------TATCT--AATGCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827794 67 - 998796 AAATGGTTATTTTCAATGAATATTGGAGTGATTTCCAGATGTA-AAAGCTTATTCG----------TATCT--AATGCTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73217386 67 + 94967081 AAATGGTTATTTTCAATGAATATTGGAGTGATTTCCAGATGTA-AAAGCTTATTTG----------TATCT--AATGCTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108435047 67 + 108979918 AAATGGTTATTGTCAATGAATATTGGAGCTGTTTCTCAATGTA-AAAGCTTATTAA----------TATCT--AATGCTT i rheMac8.chr13 I 1 I 35250 s macFas5.chr13 17622395 67 + 111193037 AAATGTTTATTTTCAGTGAATATTGGAGTGATTTCCAAATGTA-AAAGTTTATTCA----------TATCT--AATGCTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10481076 67 - 11597128 AAATGTTTATTTTCAGTGAATATTGGAGTGATTTCCAAATGTA-AAAGTTTATTCA----------TATCT--AATGCTC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4979264 67 - 5626091 AAATGTTTATTTTCAGTGAATATTGGAGTGATTTCCAAATGTA-AAAGTTTATTCA----------TATCT--AATGCTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16482315 67 + 107702431 AAATGTTTATTTTCAGTGAATATTGGAGTGATTTCCAAATGTA-AAAGTTTATTCA----------TATCT--AATGCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 252480 67 - 409142 AAATGTTTATTTTCAGTGAATATTGGAGTGATTTCCAAATGTA-AAAGTTTATTCA----------TATCT--AATGCTT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14804001 77 + 108792865 AAAAAGTCATTTTCAATAGATGTTGGAGTGATTTCCAAATGTA-AAAGCTTATTCATACTTATTCTTATCT--AATGCTC i calJac3.chr14 I 2 C 0 s saiBol1.JH378124 27247274 67 - 28799539 ATAGGGTTCTTTTTAATGAATGTTGGAGTGATTTTTGAATGTA-AAAGCTTATTAG----------TATCT--AATGCTT i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 65794 67 - 3620821 AAATGGCCATTTTCAATAACTATTGGAGTGATTTCCAAAAGTA-AAAGCTTATTCA----------TATCT--AATGCTT i cebCap1.NW_016107537v1 I 6642 C 0 s tarSyr2.KE950423v1 998329 70 + 1054607 AAATTGTTATTCTCCATAAATATTGCCACAATTTTGAAACATACAAGGCTTATTAA----------TATCTGAAAGGCTT i tarSyr2.KE950423v1 C 0 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I a score=332584.000000 s hg38.chrUn_KI270746v1 23773 53 + 66486 -GTAGCAATTTTATTTTGTATAAGTATGTCAAATTTGGTAATTTATTATACTTT s panPan2.chr2A 89818593 53 + 114371477 -GTAGCAACTTTATTTTGTATAAGTATGTCAAATTTGGTAATTTATTATACTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827861 53 - 998796 -ATAGCAACTTTATTTTGTATAAGTATGTCAAATTTGGTAATTTATTATACTTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73217453 47 + 94967081 -GTAGCAACTTTATTTT------GTATGTCAAATTTGGTAATTTGTTATACTTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108470364 53 + 108979918 -GTAGCAACTTTATTTTGTATAAGTATGTTAAATTTGGTAATTTATTATACTTT i rheMac8.chr13 I 35250 C 0 s macFas5.chr13 17622462 53 + 111193037 -GTAGCAACTTTATTTTGTATAAGTATGTTAAATTTGGTAATTTATTATACTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10481143 53 - 11597128 -GTAGCAACTTTATTTTGTATAAGTATGTTAAATTTGGTAATTTATTATACTTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4979331 53 - 5626091 -GTAGCAACTTTATTTTGTATAAGTATGTTAAATTTGGTAGTTTATTATACTTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16482382 53 + 107702431 -GTAGCAACTTTATTTTGTATAAGTATGTTAAATTTGGTAATTTATTATACTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 252547 53 - 409142 -GTAGCAACTTTATTTTGTATAAGTATGTTAAATTTGGTAATTTATTATACTTT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14804078 53 + 108792865 -CTAACAACTTTATTTTGTATAAGTACGTCAAATTTTACAGTTTATTTTACTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27247341 53 - 28799539 -GTACTAGTTTTACTTTGTAAAAGTATGTCAAAATTGATAATTGATGATACTTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 65861 53 - 3620821 -GTAGCAACTTTATTTTGTGTAAGAATGTCAAATTTGATAATTTATTATACTTT i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 998399 52 + 1054607 ATTATTATCTTCACTTTTAAAAA--ATGTCAATATTGTCAGATTATTGTACATT i tarSyr2.KE950423v1 C 0 I 47 e papAnu3.chr13 104203228 29540 + 128036923 I a score=117831.000000 s hg38.chrUn_KI270746v1 23826 23 + 66486 TTGATGAAGTTTATACATTATAC s panPan2.chr2A 89818646 23 + 114371477 TTGATGAAGTTTATATATTCTAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 827914 23 - 998796 TTGATGAAGTTTATATATTCTAG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73217500 20 + 94967081 TTGATGAAGC---TATATTATAC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108470417 23 + 108979918 TTGATGAGGTTTATTTATTATAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17622515 23 + 111193037 TTGATGAGGTTTATTTATTATAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10481196 23 - 11597128 TTGATGAGGTTTATTTATTATAC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4979384 23 - 5626091 TTGATGAGGTTTATTTATTATAC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16482435 23 + 107702431 TTGATGACGTTTATTTATTATAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 252600 23 - 409142 TTGATGAGGTTTATTTATTATAC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14804131 23 + 108792865 TTGATCAAGTTTATGTATTATGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27247394 23 - 28799539 TCATTAAGGTTTATATATTATAC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 65914 23 - 3620821 TTGATGAGGTTTATATGTTATAC i cebCap1.NW_016107537v1 C 0 I 1944 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998451 47 + 1054607 I a score=150822.000000 s hg38.chrUn_KI270746v1 23849 24 + 66486 CTTGTTGCCATGAGTGGATGAAGA s panPan2.chr2A 89818669 24 + 114371477 CTTGTTGCCATGAGTGGATGCAGA i panPan2.chr2A C 0 I 3 s gorGor5.CYUI01015730v1 827937 24 - 998796 CTTGTTGCCATGAGTGGATGAAGA i gorGor5.CYUI01015730v1 C 0 I 3 s nomLeu3.chr14 73217520 24 + 94967081 CTTGTTGCCATGAGTGGATGAAGA i nomLeu3.chr14 C 0 I 3 s rheMac8.chr13 108470440 24 + 108979918 CTTGTTGTCATGAGTGGATGAAGA i rheMac8.chr13 C 0 I 3 s macFas5.chr13 17622538 24 + 111193037 CTTGTTGTCATGAGTGGATGAAGA i macFas5.chr13 C 0 I 3 s macNem1.NW_012014799v1 10481219 24 - 11597128 CTTGTTGTCATGAGTGGATGAAGA i macNem1.NW_012014799v1 C 0 I 3 s cerAty1.NW_012001187v1 4979407 24 - 5626091 CTTGTTGTCATGAGTGGATGAAGA i cerAty1.NW_012001187v1 C 0 I 3 s chlSab2.chr14 16482458 24 + 107702431 CTTGTTGTCATGAGTGGATGAAGA i chlSab2.chr14 C 0 I 3 s manLeu1.NW_012101154v1 252623 21 - 409142 C---TTGTCATGAGTGGATGAAGA i manLeu1.NW_012101154v1 C 0 I 3 s calJac3.chr14 14804154 24 + 108792865 CTTGTTGCCATGAGTGGCTGAAGA i calJac3.chr14 C 0 I 1646 s saiBol1.JH378124 27247417 24 - 28799539 TTTTTTGCCATGGGTGGATGAAGA i saiBol1.JH378124 C 0 I 3 s cebCap1.NW_016107537v1 67881 24 - 3620821 CTTGTTGCCATGAGTGGCTGAAGA i cebCap1.NW_016107537v1 I 1944 I 1639 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998451 47 + 1054607 I a score=884307.000000 s hg38.chrUn_KI270746v1 23873 144 + 66486 TTTCGGAAGGCTAAACTAGAAGATGCAAGAGATGTAGGCACATTATTACACCATATGGGTGTGAGAAATAATGAACATTACATACTATAATTCACCAAACATATATCCAAGCTGATTAAGTTAGGACACTTCCACTGAAGAGCT s panPan2.chr2A 89818696 144 + 114371477 TTTCGGAAGGCTAAACTAGAAGATACAAGAGATGTAGGCACATTATTACACCATATGGGTGTGAGAAATAATGAATATTACATACTAGAATTCACCAAACATATATCCAAACTGATTAAGTTAGGACACTTCCACTGAAGAGAT i panPan2.chr2A I 3 C 0 s gorGor5.CYUI01015730v1 827964 144 - 998796 TTTTGGAAGGCTAAACTAGAAGATACAAGAGATGTAGGCACATTATTACACCATATGGGTGTGAGAAATAATGAATATTACATACTAGAATTCACCAAACATATATCCAAGCTGATTAAGTTAGGACACTTCCACTGAAGAGAT i gorGor5.CYUI01015730v1 I 3 C 0 s nomLeu3.chr14 73217547 144 + 94967081 TTTCAGAAGGCTAAACTAGAAGATACAAGAGATGTAGGCATATTACTACACCATATGGGTGTGAGAAATAATGAATATTACATACTAGAATTCACCAAACATATATCCAAGCTGATTAAGTTAGGACACTTCCACTGAAGAGAT i nomLeu3.chr14 I 3 C 0 s rheMac8.chr13 108470467 143 + 108979918 TTTCAGAA-GCTAAACTAGAAGATACAAGAGATGTAGGCACATTATTACACCATATGGGTGTGAGAAATAATGAATATTACATACTAGAATTCATCAAACATATATCCAAGCTGATTAAGTTAGGACATTTCCACTGAAGAGAC i rheMac8.chr13 I 3 C 0 s macFas5.chr13 17622565 143 + 111193037 TTTCAGAA-GCTAAACTAGAAGATACAAGAGATGTAGGCACATTATTACACCATATGGGTGTGAGAAATAATGAATATTACATACTAGAATTCATCAAACATATATCCAAGCTGATTAAGTTAGGACATTTCCACTGAAGAGAC i macFas5.chr13 I 3 C 0 s macNem1.NW_012014799v1 10481246 143 - 11597128 TTTCAGAA-GCTAAACTAGAAGATACAAGAGATGTAGGCACATTATTACACCATATGGGTGTGAGAAATAATGAATATTACATACTAGAATTCATCAAACATATATCCAAGCTGATTAGGTTAGGATATTTCCACTGAAGAGAC i macNem1.NW_012014799v1 I 3 C 0 s cerAty1.NW_012001187v1 4979434 143 - 5626091 TTTCAGAA-GCTAAACTAGAAGATACAAGAGATGTAGGCACATTATTACACCATATGGGTGTGAGAAATAATGAATATTACATACTAGAATTAATCAAACATATATCCAAGCTGATTAAGTTAGGACATTTCCACTGAAGAGAC i cerAty1.NW_012001187v1 I 3 C 0 s chlSab2.chr14 16482485 143 + 107702431 TTTCAGAA-GCTAAACTAGAAGATGCAAGAGATGTAGGCACATTATTACACCATATGGGTGTGAGAAATAATGAATATTACATACCAGAATTCATCAAACATGTATCCAAGCTGATTAAGTTAGGACATTTCCACTGAAGAGAT i chlSab2.chr14 I 3 C 0 s manLeu1.NW_012101154v1 252647 143 - 409142 TTTCAGAA-GCTAAACTAGAAGATACAAGAGATGTAGGCGCATTATTACACCATATGGGTGTGAGAAATAATGAATATTACATACTAGAATTCATCAAACATATATCCAAGCTGATTAAGTTAGGACATTTCCACTGAAGAGAC i manLeu1.NW_012101154v1 I 3 C 0 s calJac3.chr14 14805824 144 + 108792865 TTTCAGAAGGCTCAACTACAGGATACAAGAAATGTAGACACATTATTATACCATATGGGTGTGAGAAATAATGAATCTTATCTGCTAGGATTCTCCAAACTTATATCGAAGCTGATCCATTTAGGACAGTTCCAATGAAGAGAT i calJac3.chr14 I 1646 C 0 s saiBol1.JH378124 27247444 143 - 28799539 TTTCAGAAGGCTAAACTACAGGATACAAGAAATGTAGGCACATTGTTACACCACATGGTTCTGAGAAATAATGAA-ATTATCTGCTAGGATTCACCAAACATATATCGAAGCTGATCCATTTAGGACACTTTGAATGAAGAGAC i saiBol1.JH378124 I 3 C 0 s cebCap1.NW_016107537v1 69544 144 - 3620821 TTTCAGAAGGCTAAACTACAGGATACAAGAAATGTAGGCACATTATTACACCACATGGTTGTGAGAAATAATGAATATTATCTGCTAGGATTGACCAAACATATATCAAAGCTGATCCATTTAGGACTCTTCCAATGAAGAGAT i cebCap1.NW_016107537v1 I 1639 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998451 47 + 1054607 I a score=66371.000000 s hg38.chrUn_KI270746v1 24017 8 + 66486 GTGAAGTG s panPan2.chr2A 89818840 8 + 114371477 GTGAAGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 828108 8 - 998796 GTGAAGTG i gorGor5.CYUI01015730v1 C 0 C 0 s ponAbe2.chr2a_random 11166399 8 + 13868332 GTGAAGTG i ponAbe2.chr2a_random N 0 C 0 s nomLeu3.chr14 73217691 8 + 94967081 ATGAAGTG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108470610 8 + 108979918 GTGAAGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17622708 8 + 111193037 GTGAAGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10481389 8 - 11597128 GTGAAGTG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4979577 8 - 5626091 GTGAAGTG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16482628 8 + 107702431 ATGAAGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 252790 8 - 409142 GTGAAGTG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14805968 8 + 108792865 GTGAAGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27247587 8 - 28799539 GTGAAGTG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 69688 8 - 3620821 GTGAAGTG i cebCap1.NW_016107537v1 C 0 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 998451 47 + 1054607 I a score=31385.000000 s hg38.chrUn_KI270746v1 24025 4 + 66486 TACA s panPan2.chr2A 89818848 4 + 114371477 TACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 828116 4 - 998796 TACA i gorGor5.CYUI01015730v1 C 0 C 0 s ponAbe2.chr2a_random 11166407 4 + 13868332 TACA i ponAbe2.chr2a_random C 0 I 6732 s nomLeu3.chr14 73217699 4 + 94967081 TACA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108470618 4 + 108979918 TACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17622716 4 + 111193037 TACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10481397 4 - 11597128 TACA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4979585 4 - 5626091 TACA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16482636 4 + 107702431 TACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 252798 4 - 409142 TACA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14805976 4 + 108792865 TACG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27247595 4 - 28799539 TATG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 69696 4 - 3620821 TATG i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 998498 4 + 1054607 TACA i tarSyr2.KE950423v1 I 47 C 0 e papAnu3.chr13 104203228 29540 + 128036923 I a score=238681.000000 s hg38.chrUn_KI270746v1 24029 35 + 66486 TTCAACTAAAGTGTCATTATAATTGTGTACCTTCT s panPan2.chr2A 89818852 35 + 114371477 TTCAACTAAAGTGTCATTATATTTGTGTACCTTCT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 828120 35 - 998796 TTCAACTAAAGTGTCATTATATTTGTGTACCTTCT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73217703 35 + 94967081 TTCAACTAAAGTGTCATTATATTTGTGTACCTTCT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108470622 35 + 108979918 TTCAACTAAAATGTCATTGTAATTGTGTACCTTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17622720 35 + 111193037 TTCAACTAAAATGTCATTGTAATTGTGTACCTTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10481401 35 - 11597128 TTCAACTAAAGTGTCATTGTAATTGTGTACCTTCT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4979589 35 - 5626091 TTCAACTAAAGTGTCATTGTAATTGTGTACCTTCT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16482640 35 + 107702431 TTCAACTAAAGTGTCATTGTAATTGTGTACCTTCT i chlSab2.chr14 C 0 I 28 s manLeu1.NW_012101154v1 252802 35 - 409142 TTCAACTAAAGTGTCATTGTAATTGTGTACCTTCT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14805980 35 + 108792865 TTCAACTGAAGTGTCATCACAATTGTGTACTTTCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27247599 35 - 28799539 TTCAACTGAAGTGTCATCACAATTGTGTGCTTTCT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 69700 35 - 3620821 TTCAACTGAAGTGTCATCACAATTGTATACTTTCT i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 998502 35 + 1054607 TTTGACTGTTCTGTTTTCACAAATGTGTACTTCCT i tarSyr2.KE950423v1 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I a score=-8132.000000 s hg38.chrUn_KI270746v1 24064 5 + 66486 C----ACTG s panPan2.chr2A 89818887 5 + 114371477 C----ACTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 828155 5 - 998796 C----ACTG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73217738 5 + 94967081 C----ACTG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108470657 5 + 108979918 C----AGTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17622755 5 + 111193037 C----AGTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10481436 5 - 11597128 C----AGTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4979624 5 - 5626091 C----AGTT i cerAty1.NW_012001187v1 C 0 C 0 s manLeu1.NW_012101154v1 252837 5 - 409142 C----AGTT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14806015 5 + 108792865 CGGTT---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27247634 1 - 28799539 C-------- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 69735 1 - 3620821 C-------- i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 998537 5 + 1054607 C----AATT i tarSyr2.KE950423v1 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e chlSab2.chr14 16482675 28 + 107702431 I a score=1804542.000000 s hg38.chrUn_KI270746v1 24069 323 + 66486 ATTGATCAAGTTAAAAAGCATGACGAATATTTGCAGTAAAATGTTCCAAATCATTCTGATATCTTGCATGAAAGACA---CGCGGGTGCATGTATCACCTGCTTTGACGTTGATTC-------CCAGGTGTATGAGTTGGA-CTCTGATTTTAGATCACATTTGTCCTCAACACTCAGCATATCCACATTGATATTGACATGGTTTTATTTTAGTTTTAGACATATGGAGAAAGTTATATCACATTTGAAATTGTCAGTATATATTTCTTGAAGCCTGTATTCCTATTTTCTTCAGTGTATTTCCTTCATGTT-TAGTCCCAAGAAACAAAGTAT s panPan2.chr2A 89818892 254 + 114371477 ATCGATCAAGTTAAAGAGCATGATGAATGTTTGCAGTAAAATGTTCCAAATCATTCTGATATCTTGCATGAAAGACA---TGCAGGTGCATGTATCACCTGCTTTGACG---ATTC-------CCAGGTGTATGAGTTGGA-CTCTGATTTTAGA------------------------------------------------------------------CATATGGAGCAAGTCATATCACATTTGATATTGTCAGTGTATATTTCTTGAAGCCTGTATTCCTATTTTCTTCAGTGTATTTCCTTCATGTT-TAGTCCCAAGAAACAAAGTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 828160 254 - 998796 ATCGATCAAGTTAAAGAGCATGATGAATGTTTGCAGTAAAATATTCCAAATCATTCTGATATCTTGCATGAAAGACA---TGCAGGTGCATGTATCACCTGCTTTGACG---ATTC-------CCAGGTGTATGAGTTGGA-CTCTGATTTTAGA------------------------------------------------------------------CATATGGAGCAAGTCATATCACATTTGATATTGTCAGTGTATATTTCTTGAAGCCTGTATTCCTATTTTCTTCAGTGTATTTCCTTTATGTT-TAGTCCCAAGAAACAAAGTGT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73217743 323 + 94967081 ATCGATCAAGTTAAAGAGCATGATGAATGTTTGCAGTAAAATGTTCTAAATCATTCTGATATCTTGCATGAAAGACA---TGCAGGTGCATGTATCACCTGCTTTGACGTTGATTC-------CCAGGTATATGAGTTGGA-CTCTGATTTTAGATCACATTTGTCCTCATCACTCAGCATATCCACACTGATATTGACATGGTTTTATTTTAGTTTTAGACGTATGGAGCAAGTCATATCACATTTGATATTGTCAGTGTATATTTCTTGAAGCCTGTATTGCTATTTTCTTCAGTGTATTTCCTTCATGTT-TAGTCCCAAGAAACAAAGTAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108470662 321 + 108979918 ATCGATCAAGTTAAAGAGCATGATGAATGTTTGCAGTAAAATGGTCTAAATCATTCTGATATCTTGCATGAAAGACA---TGTGGGCACATGTACCACCTGCTTTGACATTGATTC-------CCATGTGTATGAGTTGCT-CTCTGATTTTAGATCACATTTGTCCTCATCATTCAGCATATCCACATTGATATTGACATGGTTTTATTTTAGTTTTAGACATACG--ACAAGTCATATTACGTTTGAAATTGTCAGAGTATATTTCTTGAAGCCTGTATTCCTATTTTCTTCAGTGTATTTCCTTCACATT-TAGTCCCAAGAAACAAAGTAT i rheMac8.chr13 C 0 I 1891 s macFas5.chr13 17622760 321 + 111193037 ATCGATCAAGTTAAAGAGCATGATGAATGTTTGCAGTAAAATGGTCTAAATCATTCTGATATCTTGCATGAAAGACA---TGTGGGCACATGTACCACCTGCTTTGACATTGATTC-------CCATGTGTATGAGTTGCT-CTCTGATTTTAGATCACATTTGTCCTCATCATTCAGCATATCCACATTGATATTGACATGGTTTTATTTTAGTTTTAGACATACG--ACAAGTCATATTACGTTTGAAATTGTCAGAGTATATTTCTTGAAGCCTGTATTCCTATTTTCTTCAGTGTATTTCCTTCACATT-TAGTCCCAAGAAACAAAGTAT i macFas5.chr13 C 0 I 1890 s macNem1.NW_012014799v1 10481441 321 - 11597128 ATCGATCAAGTTAAAGAGCATGATGAATGTTTGCAGTAAAATGGTCTAAATCATTCTGATATCTTGCATGAAAGACA---TGTGGGCACATGTACCACCTGCTTTGACATTGATTC-------CCATGTGTATGAGTTGCT-CTCTGATTTTAGATCACATTTGTCCTCATCATTCAGCCTATCCACATTGATATTGACATGGTTTTATTTTAGTTTTAGACATACG--ACAAGTCATATTACATTTGAAATTGTCAGAGTATATTTCTTGAAGCCTGTATTCCTATTTTCTTCAGTGTATTTCCTTCACATT-TAGTCCCAAGAAACAAAGTAT i macNem1.NW_012014799v1 C 0 I 1889 s cerAty1.NW_012001187v1 4979629 321 - 5626091 ATCGATCAAGTTAAAGAGCATGATGAATGTTTGCAGTAAAATGGTCTAAATCATTCTGATATCTTGCATGAAAGACA---TGCGGGCACATGTACCACCTGCTTTGACATTGATTC-------CCATGTGTATGAGTTGCT-CTCTGATTTTAGATCACATTTGTCCTCATCATTCAGCATATCCACATTGATATTGACATGGTTTTATTTTAGTTTTAGACATACG--ACAAGTCATATCACGTTTGAAATTGTCAGAGTATATTTCTTGAAGCCTGTATTCCTATTTTCTTCAGTGTATTTCCTTCCCATT-TAGTCCCAAGAAACAAAGTAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16482703 321 + 107702431 ATCGATCAAGTTAAAGAGCATGATGAATGTTTACAGTAAAATGGTCTAAATCATTCTGATATCTTGCATGAAAGACA---TGTGGGTGCATGTACCACCTGCTTTGACATTGATTC-------CCATGTGTATGAGTTGCT-CTCTGATTTTAGATCACATTTGTCCTCATCATTCAGCATATCTACATTGATATTGACATGGTTTTATTTTAGTTTTAGACATACA--ACAAGTCATATCACGTTTGAAATTGTCAGAGTATATTTCTTGAAGCCTGTATTCCTGTTTTCTTCAGTGTATTTCCTTCACATT-TAGTCCCAAGAAACAAAATAT i chlSab2.chr14 I 28 I 2509 s manLeu1.NW_012101154v1 252842 321 - 409142 ATCGATCAAGTTAAAGAGCATGATGAATGTTTGCAGTAAAATGGTCTAAATCATTCTGATATCTTGCATGAAAGACA---TGCGGGCACATGTACCACCTGCTTTGACATTGATTC-------CCATGTGTATGAGTTGCT-CTCTGATTTTAGATCACATTTGTCCTCATCATTCAGCATATCCACATTGATATTGACATGGTTTTATTTTAGTTTTAGACATACG--ACAAGTCATATCACGTTTGAAATTGTCAGAGTATATTTCTTGAAGCCTGTATTCCTATTTTCTTCAGTGTGTTTCCTTCACATT-TAGTCCCAAGAAACAAAGTAT i manLeu1.NW_012101154v1 C 0 I 1884 s calJac3.chr14 14806020 323 + 108792865 ATTGGGCAAGTTAAAGAGCATGATGAATGTTTGTAGCATAATGGTATAAATCCTTCTGATGTCTTGCATGAAAGATA---TGCTGGAATATGTACCACCTGCTTTGACACTGATTC-------TCAGGTGTATGAGTTGCTCCTCTGATTTTAGATCACATTGGTCCTCATCACTCGGCATATCCACATTGATATTGACACTGCTTTATTTGAGTTTTAGACACACG--ACAAATCATATCACATTTGACAGTGTAAGTGTATATATTTTGAAGACTGTACTCCTGTTTTCTTCAGTGTATTTCTGTCATGTTCCTGTCCCAAGACACAAAGTAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27247635 323 - 28799539 ATTTTGCAAGTTAAAGAGCATGATGAATGTTTGTAGCATAATGGTATAAATCCCTCTGATGTCTTGCATGAAAGGTA---TGTGGGAGTATATACCACCTTCTTTGACACTGATTC-------CCAGGTGTATGAGTTGCTCCTCTGATTTTAGATCACATTGGTCCTCATCACTCGGCATATCCACATTGATACTGAAACTGCTTTATTTGAGTTTTAGACATATG--ACAAATCATATCACATTTGACAGTGTAAGTGTATAAATTTTGAAGACTGTACTCCTGTTTTCTTCAGTGTATTTCTGTCATGTTGCTGTCCCAAGACAAAAAGTAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 69736 323 - 3620821 AGTTTGCAAGTTAAAGAGCATGATGAATGTTTGTAGCATAATGGTATAAATCCTTCTGATGTCTTGCATGAAAGATA---TGCGGGAGTATGTACCACCTGCTTTGACATTGATTC-------ACAGGTGTATGAGTTGCTCCTCTGATTTTAGAGCACATTGGTCCTCGTCACTTGGCATATCCACATTGATATTGACACTGCTTTATTTGAGTTTTAGACATATG--ACAAATCATATCACATTTGACTGTGTAAGTGTATATATTTTGAAGACTGTATTCCTGTTTTCTTCAGTGTATTTCTGTCATGTTGCTGTCCCAAGACACAAAGTAT i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 998542 281 + 1054607 ACATGATAAATGGAAGAACATAAATAATTTT---AGCATAATGAT-TGAATGATTCTGTGGTGTTGTATTAAAGATAAATTGTGG--------------TCTTTTGCCATTCATGCATCTTCTCCAGATCCA------GTC-CTCTGACTAATGATCACTTTTCTCCTCATCAGTCAGCCTGTTCACATTGATATCTGCACTACTCTTTTTTGGTTGTAGTCAGTTG--AAACATAATGT----------------AtattatgtattatgaaatctgtattcctattttatggaatgtattT-----------CTGTCCTAACCAAAATAATGA i tarSyr2.KE950423v1 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I a score=332061.000000 s hg38.chrUn_KI270746v1 24392 55 + 66486 AAAATATCAAAGC-CTACAGTAAT-----------ACAGGCAGGAGTATAAAACTTGATGCTAACAT s panPan2.chr2A 89819146 55 + 114371477 AAAATATCAAAGC-CTACAGAAAT-----------ACAGGCAGGAGGATATAACTTGATGCTAACAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 828414 55 - 998796 AAAATATCAACGC-CTACAGAAAT-----------ACAGGCAGGAGGATATAACTTGATGCTAACAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73218066 55 + 94967081 AAAATATCAAAGC-CTACAGTAAT-----------ACAGGCAGGAGGATATAACTTGATGCTAACAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108472874 55 + 108979918 AAAATATCAAAGC-CTACACTAAT-----------ACAGGCAGGAGGATACAACTTGATGCTAATAT i rheMac8.chr13 I 1891 C 0 s macFas5.chr13 17624971 55 + 111193037 AAAATATCAAAGC-CTACACTAAT-----------ACAGGCAGGAGGATACAACTTGATGCTAATAT i macFas5.chr13 I 1890 C 0 s macNem1.NW_012014799v1 10483651 55 - 11597128 AAAATATCAAAGC-CTACACTAAT-----------ACAGGCAGGAGGATACAACTTGATGCTAATAT i macNem1.NW_012014799v1 I 1889 C 0 s cerAty1.NW_012001187v1 4979950 55 - 5626091 AAAACATCAAAGC-CTACACTATT-----------ACAGGCAGGAGGATACAGCCTGAAGCTAACAC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16485533 55 + 107702431 AAAATATCAAAGC-CTACACTAAT-----------ATAGGCAGGAAGATACAACTTGATGCTAATAT i chlSab2.chr14 I 2509 C 0 s manLeu1.NW_012101154v1 255047 55 - 409142 AAAATATCAAAGC-CTACACTAAT-----------ACAGGCAGGAGGATACAACTTGATGCTAATAT i manLeu1.NW_012101154v1 I 1884 C 0 s calJac3.chr14 14806343 55 + 108792865 AAAGTATCAAAGC-CTACACTAAT-----------ACAGGCAGTGGGATACAGCTTGATGGTAACAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27247958 55 - 28799539 AAAGTATCAAAGC-CTACACTAAT-----------ACAGGCAGCAGGATACAGCTTGATGGTAACAC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 70059 55 - 3620821 AAAGTATCAAAGC-CTACACTAAT-----------ACAGGCAGCAGGATACAGCTTGATGGTAACAC i cebCap1.NW_016107537v1 C 0 I 1864 s tarSyr2.KE950423v1 998823 59 + 1054607 AAATCACCATATTACTACAGTAGTCACTTTCTAAGCCAACCATGAGGATTCAACT-----CTAA--- i tarSyr2.KE950423v1 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I a score=18692.000000 s hg38.chrUn_KI270746v1 24447 8 + 66486 GCTATCTA s panPan2.chr2A 89819201 8 + 114371477 GCTATCTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 828469 8 - 998796 GCTATCTA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73218121 8 + 94967081 GCTATCCA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108472929 8 + 108979918 GCTATCCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17625026 8 + 111193037 GCTATCCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10483706 8 - 11597128 GCTATCCA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4980005 1 - 5626091 A------- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16485588 8 + 107702431 GCTATCCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 255102 8 - 409142 GCTATCCA i manLeu1.NW_012101154v1 C 0 C 0 s tarSyr2.KE950423v1 998882 6 + 1054607 --TAACTC i tarSyr2.KE950423v1 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e cebCap1.NW_016107537v1 70114 1864 - 3620821 I e saiBol1.JH378124 27248013 0 - 28799539 C e calJac3.chr14 14806398 0 + 108792865 C a score=953465.000000 s hg38.chrUn_KI270746v1 24455 162 + 66486 TGCATTAATGTATGGATAACA-TTATCATATTTACATATGATTGATTATGTAACCCTTTTGCTTTTCAGTGTCTTCTCAGAAACAACCAGCTGAGAAGGTAATTAAAGTCTCATTTATCTGTTGAACTATTAACTG-TATAGTCTATGAAACCTACTTTACGTA s panPan2.chr2A 89819209 158 + 114371477 TGCATTAATGTATGGATAACA-TTATCATGTGTACATATGATTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTCAGAAACAACCAGCTGAGAAGGTAATTAAAGTCTCAT----ATGTTGAACTATTAACTG-TATAGTCTATGAAACCTACTTCATGTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 828477 157 - 998796 TGCATTAATGTATGGATAACA-TTATCATGTGTACATATGATTGATTATGTATCCCTTTTGCTTTTCAG-GTCTTCTCAGAAACAACCAGCTGAGAAGGTAATTAAAGTCTCAT----ATGTTGAACTATTAACTG-TATAGTCTATGAAACCTGCTTCATGTA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73218129 159 + 94967081 TGCATTAATGTATGGATAACATTTATCATATGTACATATGCGTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTCAGAAATAACCAGCTGAGAAGG----TAAAGTCTCATTTATATGTTGAACTATTAACTA-TATAGTCTATGAAACCTACTTTATGTA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108472937 162 + 108979918 TGCATGAATATATGGATAACA-TTATCATATTTACATATGATTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTGAGAAACAACCAGCCTTGAAGGTAATTAAACTCTCATTTATATGTTGAACTATTAACTG-TATAGTCTATGAAACCTACTTTATGTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17625034 162 + 111193037 TGCATGAATATATGGATAACA-TTATCATATTTACATATGATTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTGAGAAACAACCAGCCTTGAAGGTAATTAAACTCTCATTTATATGTTGAACTATTAACTG-TATAGTCTATGAAACCTACTTTATGTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10483714 162 - 11597128 TGCATGAATATATGGATAACA-TTATCATATTTACATATGATTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTGAGAAACAACCAGCCTTGAAGGTAATTAAACTCTCATTTATATGTTGAACTATTAACTG-TATAGTCTATGAAACCTACTTTATGTA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4980006 161 - 5626091 -GGATGAGTGTATGGATTATA-TTATCATATTTACATATGATTGACTGTGTATTGCTTTTGCTTTTCAGTGTCTTCTGAGAAACAACCAGCCTTGAAGGTAATTAAACTCTCATTTATATGTTGAACTATTAACTG-TATAGTCTATGAAACCTACTTTATGTA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16485596 162 + 107702431 TGCATGAATATATGGATAACA-TTATCATATTTACATATGATTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTGAGAAACAACCAGCCTTGAAGGTAATTAAACTCTCATTTATATGTTGAACTATTAACTG-TATAGTCTATGAAACCTACTTTATGTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 255110 162 - 409142 TGCATGAATATATGGATAACA-TTATCATATTTACATATGATTGCTTATGTATCCCTTTTGCTTTTCAGTGTCTTCTGAGAAACAACCAGCCTTGAAGGTAATTAAACTCTCATTTATATGTTGAACTATTAACTG-TATAGTCTATGAAACCTACTTTATGTA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14806398 162 + 108792865 TGCATGAATGTACTGATAACT-TTATCATATTTATATATGATTGATTATGTATCCCATTTGCTTTTCAGTGTCTTCTCAGAAACAACGTGCCTGGAAGGTAATTACTCTTTCATTTATATTTAAAAATGTTAACTA-TATAGTCTATCAAATATACATTACATA i calJac3.chr14 C 0 I 1308 s saiBol1.JH378124 27248013 162 - 28799539 TGCATGAATGTACTGATAACT-TTATCATATTTACGTATGATTGATTATGTATCCCATTTGCTTTTCAGTGTCTTCTCAGAAACAACCTGCCTGGAAGGTAATTACTCTTTCatttatatttaaaaatattaaCTA-TATAGTCTATCAAATATACATTATATA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 71978 160 - 3620821 TTCATGAATGTGTGGTTAACT-TTATCATACTAACTTATGATTGATTATGTAT---ACTTTTTTTTCAGAGTCTTCTCAGAAACAACTGGCCTTGAAGGTATTTGTACTCTCATTTATGTTTTGAACTATTAACTCTTATAGTCTATGAAATATACTTTTTATA i cebCap1.NW_016107537v1 I 1864 C 0 s tarSyr2.KE950423v1 998888 152 + 1054607 TGCATGAACATATGGTTGGCT-GTTTTATA-------AAAATCGATTATATGTC---TCTACTTTTTAGAGTCTCCTGGAAAATCTCCTCACCTGAAGGTAATAACTTTTGCATTCTTATTTTGAGTTATTGACTC-CATACTGTATGCAGTATACATTATTTA i tarSyr2.KE950423v1 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I a score=9399.000000 s hg38.chrUn_KI270746v1 24617 2 + 66486 TT- s panPan2.chr2A 89819367 2 + 114371477 TT- i panPan2.chr2A C 0 I 4 s gorGor5.CYUI01015730v1 828634 2 - 998796 TT- i gorGor5.CYUI01015730v1 C 0 I 4 s nomLeu3.chr14 73218288 2 + 94967081 TT- i nomLeu3.chr14 C 0 I 4 s rheMac8.chr13 108473099 2 + 108979918 TT- i rheMac8.chr13 C 0 I 4 s macFas5.chr13 17625196 2 + 111193037 TT- i macFas5.chr13 C 0 I 4 s macNem1.NW_012014799v1 10483876 2 - 11597128 TT- i macNem1.NW_012014799v1 C 0 I 4 s cerAty1.NW_012001187v1 4980167 2 - 5626091 TT- i cerAty1.NW_012001187v1 C 0 I 4 s chlSab2.chr14 16485758 2 + 107702431 TT- i chlSab2.chr14 C 0 I 4 s manLeu1.NW_012101154v1 255272 2 - 409142 TT- i manLeu1.NW_012101154v1 C 0 I 4 s calJac3.chr14 14807868 2 + 108792865 TT- i calJac3.chr14 I 1308 C 0 s saiBol1.JH378124 27248175 2 - 28799539 TT- i saiBol1.JH378124 C 0 I 1865 s cebCap1.NW_016107537v1 72138 2 - 3620821 TT- i cebCap1.NW_016107537v1 C 0 I 4 s tarSyr2.KE950423v1 999040 2 + 1054607 -TA i tarSyr2.KE950423v1 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I a score=81940.000000 s hg38.chrUn_KI270746v1 24619 15 + 66486 ---------------ATTTTGTTTTCAAAT s panPan2.chr2A 89819373 14 + 114371477 ---------------ATTTT-CTTTCAAAT i panPan2.chr2A I 4 C 0 s gorGor5.CYUI01015730v1 828640 14 - 998796 ---------------ATTTT-GTTTCAAAT i gorGor5.CYUI01015730v1 I 4 C 0 s nomLeu3.chr14 73218294 14 + 94967081 ---------------ATTTT-GTTTCAAAT i nomLeu3.chr14 I 4 C 0 s rheMac8.chr13 108473105 14 + 108979918 ---------------GTTGT-GTTTCAAAT i rheMac8.chr13 I 4 C 0 s macFas5.chr13 17625202 14 + 111193037 ---------------ATTGT-GTTTCAAAT i macFas5.chr13 I 4 C 0 s macNem1.NW_012014799v1 10483882 14 - 11597128 ---------------ATTGT-GTTTCAAAT i macNem1.NW_012014799v1 I 4 C 0 s cerAty1.NW_012001187v1 4980173 14 - 5626091 ---------------ATTGT-GTTTCAAAT i cerAty1.NW_012001187v1 I 4 C 0 s chlSab2.chr14 16485764 14 + 107702431 ---------------ATTGT-GTTTCAAAT i chlSab2.chr14 I 4 C 0 s manLeu1.NW_012101154v1 255278 14 - 409142 ---------------ATTGT-GTTTCAAAT i manLeu1.NW_012101154v1 I 4 C 0 s calJac3.chr14 14807870 14 + 108792865 ---------------ATTTT-GTTTCAAAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27250042 14 - 28799539 ---------------ATTTT-GTTTCAAAT i saiBol1.JH378124 I 1865 C 0 s cebCap1.NW_016107537v1 72144 14 - 3620821 ---------------ATTTT-GTTTCAAAT i cebCap1.NW_016107537v1 I 4 C 0 s tarSyr2.KE950423v1 999042 29 + 1054607 ACTCTTTCTGTTCTTATTTG-TTTTCATAT i tarSyr2.KE950423v1 C 0 I 4588 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I a score=735183.000000 s hg38.chrUn_KI270746v1 24634 117 + 66486 CCCATTCAGGCTACAAGTAATGAGAAATATTCTGTTTCAAATACAGCCACAGAAATAAAGGGGGGACCAATATCTGGGACAGGTAATTTTGCAAAACACATCTAATGTCACGTTCAA s panPan2.chr2A 89819387 117 + 114371477 CCCATTCAGGCTGCAAGTGACGAGAAAGATTCTGTTTCGAATATAGCCACAGAAATAAAGGAGGGACCAATATCTGGGACAGGTAATTTTGCAAAACACATCTAATGTCATGTTCAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 828654 117 - 998796 CCCATTCAGGCTGCAAGTGACGAGAAAGATTCTGTTTCGAATATAGCCACAGAAATAAAGGAGGGACCAATATCTGGGACAGGTAATTTTGCAAAACACATCTAATGTCATGTTCAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73218308 117 + 94967081 CCCATTCAGGCTACCAGTGACGAGAAAGATTCTGTTTCGAATATAGCCACAGAAATGAAGGAGGAACCAATATTTGGGACGGGTAATTTTGCAAAACACATCTAATGTCATGTTCAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108473119 117 + 108979918 CCCATTCAGGCTACAAGTGAAAAGAATGATTCTGTTTCGAATATAGCCACAGAAATAGAGGAGGGACCAACATCTGGGACAGGTAATTTTGCAAAACACATCTAATGTCATGTTCAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17625216 117 + 111193037 CCCATTCAGGCTACAAGTGAAAAGAATGATTCTGTTTCGAATATAGCCACAGAAATAGAGGAGGGACCAACATCTGGGACAGGTAATTTTGCAAAACACATCTAATGTCATGTTCAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10483896 117 - 11597128 CCCATTCAGGCTACAAGTGAAAAGAATGATTCTGTTTCGAATATAGCCACAGAAATAGAGGAGGTACCAACATCTGGGACAGGTAATTTTGCAAAACACATCTAATGTCATGTTCAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4980187 117 - 5626091 CCCATTCAGGCTACAAGTGAAAAGAATGATTCTGTTTCGAATATAGCCACAGAAATAGAGGAGGGACCAACATCTGGGACAGGTAATTTTGCAAAACACATCTAATGTCATGTTCAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16485778 117 + 107702431 CCCATTCAGGCTACAAGTGAAAAGAATGATTCTGTTTCGAATATAGCCACAGAAATAGAGGAGGGACCAACATCTGGGACAGGTAATTTTGCAAAACACATCTAATGTCATGTTCAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 255292 117 - 409142 CCCATTCAGGCTACAAGTGAAAAGAATGATTCTGTTTCGAATATAGCCACAGAAATAGAGGAGGGACCAACATCTGGGACAGGTAATTTTGCAAAACACATCTAATGTCATGTTCAA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14807884 117 + 108792865 CCCATTTAGACTACAAGTGACGAGAAAGACTCTGTTGTGAATATAGCCACAGAAACAAAGGATGTACAAAAATCTGGGACAGGTAATTTTGCAATACATAGTTAATGTCATGTTCAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27250056 117 - 28799539 CCCATTTAGACTACAAGTAACAAGAAAGACTCTGTTTCGAATATAGCCACAGAAACAAAGGATGTACAAAAATCCGGGACAGGTAATTTTGCAATACATAGTTAATGTCATGTTCAC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 72158 117 - 3620821 CCCATTTAGACTACAAGTGACAAGAAAGATTCTGTTTCGAATATAGCCACAGAAACAAAGGATGTACAAAAATCTGGGACAGGTAATTTTGCAATACATAGTTAATGTCATGTTCAC i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=17381.000000 s hg38.chrUn_KI270746v1 24751 2 + 66486 TC s panPan2.chr2A 89819504 2 + 114371477 TC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 828771 2 - 998796 TC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73218425 2 + 94967081 TC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108473236 2 + 108979918 TC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17625333 2 + 111193037 TC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484013 2 - 11597128 TC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4980304 2 - 5626091 TC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16485895 2 + 107702431 TC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 255409 2 - 409142 TC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14808001 2 + 108792865 TC i calJac3.chr14 C 0 I 1781 s saiBol1.JH378124 27250173 2 - 28799539 TC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 72275 2 - 3620821 TC i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19647415 2 - 27850971 TC i otoGar3.GL873538 N 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=1727689.000000 s hg38.chrUn_KI270746v1 24753 263 + 66486 AAGATAGAAGAGAACATCCCTTCTCcaaataaatcag-tggagagttcatctaagctgcacgttctgattcagtatgcctgagattgttcatttgtagtgagttctcaggtgaccctgatgctgctggtccttgg-ccatgatctgagtagtaagATTATAGACTTCCCTACATTGAAATTGGGAAGAAGAACCATTGGAGAGCAGTTCAACACATACCAGGCTAAGGGAGCAGCATAATTTTGCTTTAATTCTACAGCATGTTT s panPan2.chr2A 89819506 263 + 114371477 AAGATAGAAGAGAACTTCCCTTCCCCAAATAAATCAG-tggggagttcatctaagctgcacgttctgattcagcacacctgagattcttcatttgtagtgagttctcaggtgaccctgatgctgctggtccttgg-ccgtgatctgagtagtaagATTATAGACTTCCCTACATTGAAATTGGGAAGAAGAACCACTGGAGAGCAGGTCAACACATACCAGGCTCAGGGAGCAGCATAATTTTGCTTTAATTTTACAGCATGTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 828773 263 - 998796 AAGATAGAAGAGAACTTCCCTTCCCCAAATAAATCAG-TGGGTAGTTCATCtaagctgcacgttctgattcagcacgcctgagattcttcatttgtagtgagttctcaggtgaccctgatgctgctggtccttgg-ccgtgatctgagtagtaaTATTACAGACTTCCCTACATTGAAATTGGGAAGAAGAACCATTGGAGAGCAGGTCAACACATACCAGGCTCAGGGAGCAGCATAATTTTGCTTTAATTTTACAGCATGTTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73218427 263 + 94967081 AAGATAGAAGAGAACTTCCCTTCCCcaaataaatcag-tggggagttcgtctaagctgcatgttctgattcagtacgcctgagattcttcatttgtagtgagttctcaggtgaccctgatgctgctggtccttgg-ccatgatctgagtagtaagATTATAGACTTCCCCACATTGAAATTGGGAAGAAGAACCATTGCAGAGCAGTTCAACACATACCAGGCTAAGGGAAAAGCATAATTTTGCTTTAATTTTACAGCATGTTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108473238 263 + 108979918 AAGGTAGAAGAGAACTTCCCTTCCCAGAATAAATCAG-TGAGGAGTTCATCtaagctgcatgttctgattcagcacgtctgagattcttcatttgtagtgagttctcaggtgaccctgatgctgctggtcgttgg-ccatgatctgaatagtaagATTATAGACTTCTCTACATTGAAATTGGAAAGAAGAACCATTGGAGAGCAGTTCGACACATACCAGGCTCAGGGAACAGCATAATTTTGCTTTAATTTTACAGCATGTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17625335 263 + 111193037 AAGGTAGAAGAGAACTTCCCTTCCCAGAATAAATCAG-TGAGGAGTTCATCtaagctgcatgttctgattcagcacgtctgagattcttcatttgtagtgagttctcaggtgaccctgatgctgctggtcgttgg-ccatgatctgaatagtaagATTATAGACTTCTCTACATTGAAATTGGAAAGAAGAACCATTGGAGAGCAGTTCGACACATACCAGGCTCAGGGAACAGCATAATTTTGCTTTAATTTTACAGCATGTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484015 263 - 11597128 AAGGTAGAAGAGAACTTCCCTTCCCAGAATAAATCAG-TGAGGAGTTCATCtaagctgcatgttctgattcagcacgtctgagattcttcatttgtagtgagttctcaggtgaccctgatgctgctggtcgttgg-ccatgatctgaatagtaagATTATAGACTTCTCTACATTGAAATTGGAAAGAAGAACCATTGGAGAGCAGTTCGACACATACCAGGCTCAGGGAACAGCATAATTTTGCTTTAATTTTACAGCATGTTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4980306 263 - 5626091 AAGGTAGAAGAGAACTTCCCTTCCCAGAATAAATCAG-TGAGGAGTTCATCtaagctgcatgttctgattcagcacgtctgagattcttcatttgtagtgagttctcaggtgaccctgatgctgctggtcgttgg-ccatgatctgaatagtaagATTATAGACTTCTCTACATTGAAATTGGAAAGAAGAACCACTGGAGAGCAGTTCGACACATACCAGGCTCAGGGAACAGCATAATTTTGCTTTAATTTTACAGCATGTTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16485897 263 + 107702431 AAGGTAGAAGAGAACTTCCCTTCCCAGAATAAATCAG-TGAGGAATTCATCtaagctgcacgttctgattcagcacgtctgagattcttcatttgtagtgagttctcaggtgaccctgatgctgctggtccttgg-ccatgatctgagtagtaagATTATAGACTTCTCTACATTGAAATTGGAAAGAAGAACCATTGGAGAGCAGTTCGACACGTACCAGGCTCAGGGAACAGCATAATTTTGCTTTATTTTTACAGCATATTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 255411 263 - 409142 AAGGTAGAAGAGAACTTCCCTTCCCAGAATAAATCAG-TGAGGAGTTCATCtaagctgcatgttctgattcagcacgtctgagattcttcatttgtagtgagttctcaggtgaccctgatgctgctggtcgttgg-ccatgatctgaatagtaagATTATAGACTTCTCTACATTGAAATTGGAAAGACGAACCATTGGAGAGCAGTTCGACACATACCAGGCTCAGGGAACAGCATAATTTTGCTTTAATTTTACAGCATGTTT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14809784 259 + 108792865 AAAATAGAAGAGAACTTCTCTTCCATGAA-AAATTAG-Cggagggctcattgaagctgcacattctgattcagcaggcctgagattctgaatttgtagtaagttcttagttgacgctggtgctgctggtccttga-ctatgatctgagtagtaagCTAACAGACTTCTTTACGTTGAAATTGGGAAGAAGAACCATTAAAGAGCATTTCAGGACATACCAGACTC---GGGCAGCATAATTTTGCTTTAATTCTACAGCATGTTT i calJac3.chr14 I 1781 I 1 s saiBol1.JH378124 27250175 261 - 28799539 AAGATAGAAGAGAACTTCTCTTCCATGAACAAATTAG-TGGAGGGCTCACTGAAGCtgcacattctggttcagcaggcctgagattctgaatttgtaataagttcttagctgatgctgatgctgctggtccttga-cgatgatctgagtagtaagCTTACAGACTTCTTTACA-TGAAATTGGGAAGAAGAACCATTAAAGAGCAGTTCAGGACATACCAGGCTCA-GGGGCAGCATAATTTTGCTTTAATTCTACAGCATGTTT i saiBol1.JH378124 C 0 I 1856 s cebCap1.NW_016107537v1 72277 259 - 3620821 AAGATAGAAGAGAACTTCTCTTCCATGAacaaattag-cggagggctcattgaagctgcacattctgattcagcaggcctgagattctgaatttgtaataagttcttagttgatgccgatgctgctggtccttga-ccatgatctgagtagtaagCTTACAGACTTTATTACATTGAAATTGG---GAAGAACCATTAAAGAGCAGTTCAGGACATACCAGGCTCA-GGGGCAGCATAATTTTGCTTTAATTCTACAGCATGTTT i cebCap1.NW_016107537v1 C 0 I 1 s otoGar3.GL873538 19647417 255 - 27850971 AGTATAGACcagagcttctcaaatgttaaggtatcagctggggaccttgttaaaaatacacattgtgattcagcaggcatgggatgctgtatatctagtatgtttttaggtgatgctgatgatattggtccttggaccat--cctgagtagGA-------TGACTTCTGTATGGAGACATCTGGAAGAATCACCATTGGATAACAGTTCAA-ACATAGCAGGACCAAGGGAAAGCATTATTTTGCTTTTATTTCTGAGCATGTTT i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=531334.000000 s hg38.chrUn_KI270746v1 25016 104 + 66486 C-GTCAAGAGGGGAAAGAG-AACGAGA--TGAAGTAATAGATATTATAGGCATCATATCATATTGTTATAAACAGAG-------GGAC-AAGT-----GATCTGAATAACTCCACAAACAC s panPan2.chr2A 89819769 105 + 114371477 CCATCAAGAGGGGAAAGAG-AACGAGA--TGAAGTAATAGATATTATAGGCATCATATCGTATTGTTTTAAACAGAG-------GGAA-AAGT-----GATCCTAACAACTCCATAAACAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829036 105 - 998796 CCATCAAGAGGGGAAAGAG-AACGAGA--TGAAGTAATAGATATTATAAGCATCATATCGTACTGTTATAAACAGAG-------GGAA-AAGT-----GATCCTAACAACTCCATAAGCAC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73218690 112 + 94967081 CCATCAAGAGGGGAAAGAG-AATGAGA--TGAAGTAATAGAAATTGTAGGCATCATATTGTATTGTTATAAACAGAGGGAAAAAGGAA-AAGT-----GATCCTAATTACTCCATAACTAC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108473501 105 + 108979918 CCATCAAGAGGAGAAGGAG-AATGAGC--TGAAGTATTAGATATCATAGGCATCTTATCGTATTCTTATAAACAGAG-------GGAA-AACT-----GATCCTAATAACTCCATAAACAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17625598 105 + 111193037 CCATCAAGAGGAGAAGGAG-AATGAGC--TGAAGTATTAGATATTATAGGCATCATATCGTATTCTTATAAACAGAG-------GGAA-AACT-----GATCCTAATAACTCCATAAACAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484278 105 - 11597128 CCATCAAGAGGAGAAGGAG-AATGAGC--TGAAGTATTAGATATTATAGGCATCATATCGTATTCTTATAAACAGAG-------GGAA-AACT-----GATCCTAATAACTCCATAAACAC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4980569 105 - 5626091 CCATCAAGAGGAGAAGGAG-AATGAGC--TGAAGTATTAGATATTATAGGCATCATATCGTATTCTTATAAACAGAG-------GGAA-AACT-----GATCCTAATAACTCCATAAACAC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16486160 105 + 107702431 CCATCAAGAGGAGAAGGAG-AATGAGC--TGAAGTATTAGATATTATAGGCATCATATCGTATTCTTATAAACAAAG-------TGAA-AACT-----GATCCTAATAACTCCATAAACAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 255674 105 - 409142 CCATCAAGAGGAGAAGGAG-AATGAGC--TGAAGTATTAGATATTATAGGCATCATATCGTATTCTTATAAACAGAG-------GGAA-AACT-----GATCCTAATAACTCCATAAACAC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14810044 106 + 108792865 -CTTCAAGAAGGAAAAAAT-GAAAAGATTTGAAATAACAGAAATTCTAAGTGTCAGATCATATTGCTAAAACCAGAA-------GGAAGAAGT-----GATCCTAATAA-TCCATAAACAC i calJac3.chr14 I 1 C 0 s saiBol1.JH378124 27252292 104 - 28799539 -CATAAACAGGGAAAGGAG-AAAGAGA--TGAAGTGAAAGAAATTGTAGGCACCAGATCGTATTGCTAGAACTAGAT-------GGAAGAAGT-----GATTGTAATGA-CACACAAACAT i saiBol1.JH378124 I 1856 C 0 s cebCap1.NW_016107537v1 72537 106 - 3620821 -CTTCAAGAGGGAAAAAAT-GAAAAGATATGAAGTAACAGAAATTATAAGCATCAGATCATATTGCTAAAACCAGAA-------GGAAGAAGT-----GATCCTAATAA-TCCATAAACAC i cebCap1.NW_016107537v1 I 1 I 1849 s otoGar3.GL873538 19647672 108 - 27850971 CTAGCCAGAGTAGAAGGAGCAAAGAGA--TGAAGAAATCAAAATTATAGATATAAGATATTATTGCTAAATAAAGAG-------GACA-GGGTTGGTGGGACCAATTTATTTGAAGAG--- i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=1809992.000000 s hg38.chrUn_KI270746v1 25120 282 + 66486 TGTAGAATGAGAACTAAGAAGACCACTGATGGAGCAATTATTTTCCTCAAGGAAGAGGGATTGTGAGGCAGGACGGAGGA---AAAAGAAGAAAGTATTTATGTAATTTTGGGGTTTCTGCTGAGGAAACCTGAGT--GAACTCATTTCAGATGCATTTGGAATATTTGCATTAA---AGAAGATTTGA-TTTTGGCTGCTCCAAGAAATACTGGAAGCAGGAAACAATGCTAGAATTGGGATAAACCACAGTGACTCATTACACCTCTTTGTTACTATTAGGCATCAGAG s panPan2.chr2A 89819874 282 + 114371477 TGTAGAATGAGAACTAAGAAGACCACTGATGAAGCACTTATTCTCCTCAAGGAAGAGGGATTGTGAGGCAGGAAGGAGGA---AAAAGAAGAAGGTATTTATGTAATTTTGGGGTTTCTGCTGAGGAAACCTGAGT--GAACTCATTTCAGATGCATTTGGAATATTTGCATAAA---AGAAGATTTGA-TTCTGGCTGCTCCAAGAACTACTGGAAGCAGGAAACAACGCTAGAATTGGGATAAACCACAGTGACCCATTACTCCTCTTTGTTACCATTAGGCATCAGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829141 282 - 998796 TGTAGAATGAGAACTAAGAAGACCACTGATGTAGCACTTATTCTCCTCAAGGAAGAGGGATCGTGAGGCAGGAAGGAGGA---AAAAGAAGAAGGTATTTATGTAATTTTGGGGTTTCTGCTGAGGAAACCTGAGT--GAACTCATTTCAGATGCATTTGGAATATTTGCATAAA---AGAAGATTTGA-TTCTGGCTGCTCCAAGAACTACTGGAAGCAGGAAACAATGCTAGAATTGGGATAAACCACAGTGACTCATTACTCTTCTTTGTTACCACTGGGCATCAGAG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73218802 282 + 94967081 TGTAGAATGAGAACTAAGAAGACCACTGATGTAGCAATTATTTTCCTCAAGGAAGAGGGATTGTGAGGCAGGAAGGAGGA---AAAAGAAGAAGGTATTTATGTAATTTTGGGGTTTCTGCTGAGGAAACCTGAGT--GAACTCATTTCAGATGCATTTGGAATATTTGCATAAA---AGAAGATTTGA-TTTTGGCTGCTCCAAGAACTACTGGAAGCAGGAAACAATGCTAGAACTGGGATAAACCACAGTGACTCATTACTCCTCTTTGTTACTATTAGGCATCAGAG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108473606 282 + 108979918 TGTAAAATGAGAACTAATGTGACCACTGATGTATCAATTATTTTCCTCGAAGAAGAGGGATTGTGAGGCAGGAAGGATGG---AAAAGAAGAAGGTATTTATGTAATTTTGGGTTTTCTGCTGAGGAAACCTGAGT--GAACTCATTTCAGATGCATTTGGAATATTTGCATAAA---AGAAGATTTGA-TTTTGGCTGATCCGTGAGCTACAGGAAGCAGGAAACAGTGCTACAATTGGGATAAACCACAGTGACTCATTACTCCTCTTTGTTACTATTAGGCATCAGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17625703 282 + 111193037 TGTAAAATGAGAACTAATGTGACCACTGATGTATCAATTATTTTCCTCGAAGAAGAGGGATTGTGAGGCAGGAAGGATGG---AAAAGAAGAAGGTATTTATGTAATTTTGGGTTTTCTGCTGAGGAAACCTGAGT--GAACTCATTTCAGATGCATTTGGAATATTTGCATAAA---AGAAGATTTGA-TTTTGGCTGATCCGTGAGCTACAGGAAGCAGGAAACAGTGCTACAATTGGGATAAACCACAGTGACTCATTACTCCTCTTTGTTACTATTAGGCATCAGAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484383 282 - 11597128 TGTAAAATGAGAACTAATGTGACCACTGATGTATCAATTATTTTCTTCGAAGAAGAGGGATTGTGAGGCAGGAAGGATGG---AAAAGAAGAAGGTATTTATGTAATTTTGGGTTTTCTGCTGAGGAAACCTGAGT--GAACTCATTTCAGATGCATTTGGAATATTTGCATAAA---AGAAGATTTGA-TTTTGGCTGATCCGTGAGCTACAGGAAGCAGGAAACAGTGCTACAATTGGGATAAACCACAGTGACTCATTACTCCTCTTTGTTACTATTAGGCATCAGAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4980674 282 - 5626091 TGTAAAATGAGAACTAATGTGACCACTGATGTATCAATTATTTTCCTCGAAGAAGAGGGATTGTGAGGCAGGAAGGATGG---AAAAGAAGAAGATATTTATGTAATTTTGGGTTTTCTGCTGAGGAAACCTGAGT--GAACTCATTTCAGATGCATTTGGAATATTTGCATAAA---AGAATATTTGA-TTTTGGCTGATCCATGAACTACAGGAAGCAGGAAACAGTGCTAGGATTGGGATAAACCATAGTGACTCATTACTCCTCTTTGTTACTATTAGGCATCAGAG i cerAty1.NW_012001187v1 C 0 I 3835 s chlSab2.chr14 16486265 282 + 107702431 TGTAAAATGAGAACTAATGCGACCACTGGTGTATCAATTATTTTCCTCGAAGAAGAGGGATTGTGAGGCAGGAAGGATGG---AAAAGAAGAAGGTATTTATGTAATTTTGGGTTTTCTGCTGAGGAAACCTGAGT--GAACTCATTTCAGATGCATTTGGAATATTTGCATAAA---AGAAGATTTGA-TTTTGGCTGATCCGTGAACTACAGGAAGCATGAAACAGTGCTAGAATTGGGATAAACCGTAGTGACTCATTACTGCTCTTTGTTACTATTAGGCATCAGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 255779 282 - 409142 TGTAAAATGAGAACTAATGTGACCACTGATGTATCAATTATTTTCCTCGAAGAAGAGGGATTGTGAGGCAGGAAGGATGG---AAAAGAAGAAGGTATTTATGTAATTTTGGGTTTTCTGCTGAGGAAACCTGAGT--GAACTCATTTCAGATGCATTTGCAATATTTGCATAAA---AGAATATTTGA-TTTTGGCTGATCCGTGAACTACAGGAAGCAGGAAACAGTGCTAGAATTGGGATAAACCATAGTGACTCATTACTCCTCTTTGTTACTATTAGGCATCAGAG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14810150 280 + 108792865 TGGAGAAGGAGAATTAAAGAGACCACTGATGTAATAATTATTTTCCTCAAGGAAGAGAGATTGTGAGGCAAGAAGGAGGG------AAAAGAAATTATTTATGTAATTTTGGGGTTTCTGCTGAGGAAACCTGAGT--GAACTCACTTCAGATGCACTTAGAATATTTTCATAAA---AGAAGATTTGATTTTTGGCTTCTCTAGGAACTACTGGAGGCAGGAAAGAGTGCTGGAAATGGGATGAACCACCCTGACTCATTCCTTTTCTATGTTACTATTAGGCATCAGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27252396 282 - 28799539 TATAGAATGAGAACTAAGGAGATCACTGATGTAGTAATTATTTTTGTCAAGGAAGAGGAAATGTGAGTCAGGAAGGAGGG---AAAAAAAGAAGTTATTTATTTAATTTTGGGATATCTGCTGAGGAAACCTGAAT--AAACTCATTTCAGAATCATTTTGAATATTTACATATA---AGAAGATTTGA-TTTTGGCTGCTCCAGGAATGACTTGAAGCAGGGAAAAGTGCCGTAATTGGGATTAACCACCCTGACTTATTACTCTTCTATATTACTATTAGGCATCAGAA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 74492 282 - 3620821 TGTAGAATGAGAACTAAGGAGATCACTGATGTAGTAATTATTTTCCTCAAGGAAGAGGAAATGTGAGTCAGGAAGGAGGG---AAAAAAAGAAGTTATTTATTTAATTTTGGGATATCTGCTGAGGAAACCTGAAT--GAACTCATTTCAAATTCATTTCGAATATTGACATATA---AGAAGATTTGA-TTTTGGCTGCTCCAGGAATGAATTGAAGCAGGAAAAAGTGCTATAATTGGGATTAACCACCCTCACTTATTACTCTTCTATATTACTATTAGGCATCAGAA i cebCap1.NW_016107537v1 I 1849 C 0 s otoGar3.GL873538 19647780 278 - 27850971 TGTAGAAGAAGAATCAA---GACCACAGACACTAAGATTAATTTTGCAGAGGAAGAAAGATTGTGAATGAGGAAGGAGGGAGGAAAGAAGGAAGTCAGCTAGGTAATTATGTAGTTAATGATGAGAAAACTTGAATGAGAATTCACTTCAGGTGGCTTCAATATACTTATACTCACACGGAACATGAGA------GATGCTCAGAG----ATTAGTAACAGGGGGAAATGCTAGAATTGGGGTAAACCACAGTAGCACATTTCTGCTCTCCATTACTGTCAGGTATCAAAG i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=8281.000000 s hg38.chrUn_KI270746v1 25402 1 + 66486 A s panPan2.chr2A 89820156 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829423 1 - 998796 A i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73219084 1 + 94967081 A i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108473888 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17625985 1 + 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484665 1 - 11597128 A i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4984791 1 - 5626091 A i cerAty1.NW_012001187v1 I 3835 C 0 s chlSab2.chr14 16486547 1 + 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 256061 1 - 409142 A i manLeu1.NW_012101154v1 C 0 I 1856 s calJac3.chr14 14810430 1 + 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27252678 1 - 28799539 A i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 74774 1 - 3620821 A i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19648058 1 - 27850971 A i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=164078.000000 s hg38.chrUn_KI270746v1 25403 40 + 66486 -----------------------------------------------------------------------------------------TACATGTTTTGTTGACT--------------------------------------TTAATTAT-AAAAA-----------------------------------TGAGATAAAC s panPan2.chr2A 89820157 40 + 114371477 -----------------------------------------------------------------------------------------TACATGTTTTGTTGACT--------------------------------------TTAGTTAT-AAAAA-----------------------------------TGAGATAAAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829424 40 - 998796 -----------------------------------------------------------------------------------------TGCATGTTTTGTTGACT--------------------------------------TTAGTTAT-AAAAA-----------------------------------TGAGATAAAC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73219085 40 + 94967081 -----------------------------------------------------------------------------------------TACATGTTTTGTTGACT--------------------------------------TTAGTTAT-AAACA-----------------------------------TGAGATAAAC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108473889 41 + 108979918 -----------------------------------------------------------------------------------------TACATGTTTTGTTGATT--------------------------------------TTAGTTATAAAAAA-----------------------------------TGAGATAAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17625986 41 + 111193037 -----------------------------------------------------------------------------------------TACATGTTTTGTTGATT--------------------------------------TTAGTTATAAAAAA-----------------------------------TGAGATAAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484666 41 - 11597128 -----------------------------------------------------------------------------------------TACATGTTTTGTTGATT--------------------------------------TTAGTTATAAAAAA-----------------------------------TGAGATAAAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4984792 40 - 5626091 -----------------------------------------------------------------------------------------TACATGTTTTGTTGATT--------------------------------------TTAGTTAT-AAAAA-----------------------------------TTAGATAAAC i cerAty1.NW_012001187v1 C 0 T 34788 s chlSab2.chr14 16486548 41 + 107702431 -----------------------------------------------------------------------------------------TACATGTTTTGTTGATT--------------------------------------TTAGTTATAAAAAA-----------------------------------TGAGATAAAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 257918 40 - 409142 -----------------------------------------------------------------------------------------TACATGTTTCATTGATT--------------------------------------TTAGTTAT-AAAAA-----------------------------------TGAGATATGC i manLeu1.NW_012101154v1 I 1856 C 0 s calJac3.chr14 14810431 36 + 108792865 -----------------------------------------------------------------------------------------TATATGTTTTGTTGAT------------------------------------------ATTAT-TCAAA-----------------------------------TGGGATAAAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27252679 40 - 28799539 -----------------------------------------------------------------------------------------TACATGTTTTGTTGATT--------------------------------------TTAGTTAT-ACAAA-----------------------------------TTAGATAAAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 74775 40 - 3620821 -----------------------------------------------------------------------------------------TACATGTTTTGTTGATT--------------------------------------TTAGTTAT-ACAAA-----------------------------------TTAGATAAAT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19648059 202 - 27850971 TAgtaagttgaccacccaagggcctataacaaactggtcaacatacggaggtggtcaacataaagaactaggcctaatgctctgataagtacatgtggtggtgcctgcccagtctatgaaaattaggtcaatgtgaggaggtggtcagctat-agaggtTATGCTGTATGATGTTGTATTGATGTTAATCACTTGAGATTAAT i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=777771.000000 s hg38.chrUn_KI270746v1 25443 134 + 66486 TTGCATATGAATACATTGGC-TTCCTTGTTCAAGGAGCAACCTCTTGGATAAAATAGCTATTTCACGAAACTTCTTTAGAGAATAACA-TGATAATCCCAACAAGGCT-ATTTTAGAAACAAAAATGATGTTGAATT s panPan2.chr2A 89820197 134 + 114371477 TTGAATATGAATACATTGGC-TTCCTTGTTCAAGGAGCTAACTCTCAGATAAAATAGCTATTTAATGAAACTTCTTTAGAGAATAACA-TGATACTCCCAACAAGACT-ATTTTAGAAACAAAAATGATGTTGAAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829464 134 - 998796 TTGAATATGAATACATTGGC-TTCCTTGTTCAAGGAGCTAACTCTCAGATAAAATAGCTATTTAATGAAACTTCTTTAGAGAATAACA-TGATACTCCCAACAAGACT-ATTTTAGAAACAAAAATGATGTTGAATT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73219125 131 + 94967081 TTGCATATGAATACACTGGC-TTCCTTGTTCAGGGAGCTAACTCTTGGATAAAATAGCTATTGAATGAAACTTCTTTAGAGAATAACA-TGATACTCCCAACAAGACT-ATTTTAGAAACAAAA---ATGTTGAATT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108473930 134 + 108979918 TTGAGTATGAATACATTGCC-TTCCTTGTTCAAGGAGCTAACTCTTGGATAAAATAGCTATTTAATGAAACTTCTTTAGAGAATAGTA-TGATACTCTTAAGAAGACT-ATTTTAGAAACAAAAATTATGTTGAATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17626027 134 + 111193037 TTGAGTATGAATACATTGCC-TTCCTTGTTCAAGGAGCTAACTCTTGGATAAAATAGCTATTTAATGAAACTTCTTTAGAGAATAGTA-TGATACTCTTAAGAAGACT-ATTTTAGAAACAAAAATTATGTTGAATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484707 134 - 11597128 TTGAGTATGAATACATTGCC-TTCCTTGTTCAAGGAGCTAACTCTTGGATAAAATAGCTATTTAATGAAACTTCTTTAGAGAACAGTA-TGATACTCTTAAGAAGACT-ATTTTAGAAACAAAAATTATGTTGAATT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4950044 134 - 5626091 GTGAATATGCATACATTGGC-TTTGTTGCTCAGAGAGCTAACTTTTGGATAAAATGGCAATTTAATGAAAATACTTTAGAGAATAACA-TGATCCTTCAAACCAGACT-ATTTTAGAAACAAAAATAATGTTGAATT i cerAty1.NW_012001187v1 T 34788 C 0 s chlSab2.chr14 16486589 134 + 107702431 TTGAGTATGAATACATTGCC-TTCCTTGTTCAAGGAGCTAACTCTTGGATAAAATAGCTATTTAATGAAACTTCTTTAGAGAATGGTA-CGATACTCTCATGAAGACT-ATTTTAGAAACAAAAATTATGTTGAATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 257958 134 - 409142 TTGAATATGAATACCTTGGC-TTCTTTGATCAAAGAGGTAACTCTTGGATAAAACCGCTATTTAATGAATTTTCTTTAGAGAAGAGCA-TGATACTCCTAGCAAGACT-ATTTTAGAAACAAAAATAATGTTGAATT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14810467 134 + 108792865 ATGAATATGCATACATTGGCTTTTTTTTTTCAAAGAGCTAACTTTTGGATAAAAAAGTAATTT-ATGGAAATGCTTTAGAGAGCAACA-TTATACTTCAAACCAGAAC-TTTTTCGAAATAAAAATTATGTTGAATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27252719 134 - 28799539 TTGAATATGAATATATTGTC-TTCTTTGTTCAAGGAGCTAACTCTTGGATAAAATAGCTATTTAATGAAAATTCCTTAGAGAATAACA-TGATACTTTAAACAAGACT-ATTTTAGAAACAACAATAATGTTGAATT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 74815 134 - 3620821 TTGAATATGAATATATTGTC-TTCATTGTTCAAGGAGCTAACTCTTGGATAAAATAGCTATTTAATGAAAATTCCCTAGAGAATAACA-TGATACTTTAAACAAGACT-ATTTTAGAAACAACAATAATGTTGAATT i cebCap1.NW_016107537v1 C 0 I 24 s otoGar3.GL873538 19648261 130 - 27850971 CTGAATATAGATGTATTGA--TTGGTTTTTAAGATTACTGATTTTTTAATAA-----CTGTTTCATAAAAATCCATTCAAGACTAATGTTGATATAGAAAACCAAACTAATTTTAGAAACAAAAAACTTATAGAGTT i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=6228.000000 s hg38.chrUn_KI270746v1 25577 1 + 66486 C s panPan2.chr2A 89820331 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829598 1 - 998796 C i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73219256 1 + 94967081 C i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108474064 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17626161 1 + 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484841 1 - 11597128 C i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4950178 1 - 5626091 C i cerAty1.NW_012001187v1 C 0 I 2 s chlSab2.chr14 16486723 1 + 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 258092 1 - 409142 C i manLeu1.NW_012101154v1 C 0 T 39763 s calJac3.chr14 14810601 1 + 108792865 C i calJac3.chr14 C 0 I 2 s saiBol1.JH378124 27252853 1 - 28799539 T i saiBol1.JH378124 C 0 I 2 s otoGar3.GL873538 19648391 1 - 27850971 C i otoGar3.GL873538 C 0 I 2 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e cebCap1.NW_016107537v1 74949 24 - 3620821 I a score=104265.000000 s hg38.chrUn_KI270746v1 25578 22 + 66486 TAATTAACTCCTAAAGTGGTCA s panPan2.chr2A 89820332 22 + 114371477 TAATTAACTCCTAAAGTGGTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829599 22 - 998796 TAATTAACTCCTAAAGTGGTCA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73219257 22 + 94967081 TAATTAACTCCTAAAGTGGTCA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108474065 22 + 108979918 AAATTAACTCCTAAAATGGTCA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17626162 22 + 111193037 TAATTAACTCCTAAAATGGTCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484842 22 - 11597128 TAATTAACTCCTAAAATGGTCA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4950181 22 - 5626091 TAATTGACCCCTAAAATATTTA i cerAty1.NW_012001187v1 I 2 C 0 s chlSab2.chr14 16486724 22 + 107702431 TAATTAACTCCTAAAATGGTCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 218330 22 - 409142 TAATTGACCCCTAAAATATTTA i manLeu1.NW_012101154v1 T 39763 C 0 s calJac3.chr14 14810604 21 + 108792865 TAATTGACTCTTAAAATGGTT- i calJac3.chr14 I 2 C 0 s saiBol1.JH378124 27252856 21 - 28799539 TAATTGACTCTTAAAATGTTT- i saiBol1.JH378124 I 2 C 0 s otoGar3.GL873538 19648394 22 - 27850971 TCTTTGAATGCTAAAATTGTTA i otoGar3.GL873538 I 2 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e cebCap1.NW_016107537v1 74949 24 - 3620821 I a score=184975.000000 s hg38.chrUn_KI270746v1 25600 26 + 66486 TTTTCAATGAATACTGGGATGATTTC s panPan2.chr2A 89820354 26 + 114371477 TTTTCAATGAATATTGGAGTGATTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829621 26 - 998796 TTTTCAATGAATATTGGAGTGATTTC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73219279 26 + 94967081 TTTTCAATGAATATTGGAGTGATTTC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108474087 26 + 108979918 TTTTCAATGAATATTAGAGTGATTTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17626184 26 + 111193037 TTTTCAATGAATATTAGAGTGATTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484864 26 - 11597128 TTTTCAATGAATATTAGAGTGATTTC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4950203 26 - 5626091 TTTTTAATGAATATTGGAGTGATTTC i cerAty1.NW_012001187v1 C 0 I 30951 s chlSab2.chr14 16486746 26 + 107702431 TTTTCAATGAATATTAGAGGGATTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 218352 26 - 409142 TTTTTAATGAATATTGGAGTGATTTC i manLeu1.NW_012101154v1 C 0 I 37911 s calJac3.chr14 14810625 26 + 108792865 ATTTCAATGAATATGGGAGTGATTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27252877 26 - 28799539 TTTTCAATGAATATTGAAATGATTTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 74973 26 - 3620821 TTTTCAATGAATATTGGAGTGATTTT i cebCap1.NW_016107537v1 I 24 C 0 s otoGar3.GL873538 19648416 26 - 27850971 TTTTCAATAAATATTGCAATGATTTG i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=66362.000000 s hg38.chrUn_KI270746v1 25626 11 + 66486 TGAATGTAAAA s panPan2.chr2A 89820380 11 + 114371477 TGAACGTAAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829647 11 - 998796 TGAACGTAAAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73219305 11 + 94967081 TGAATGTAAAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108474113 11 + 108979918 TGAATGTAAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17626210 11 + 111193037 TGAATGTAAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484890 11 - 11597128 TGAATGTAAAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4981180 11 - 5626091 TGAATGTAAAA i cerAty1.NW_012001187v1 I 30951 C 0 s chlSab2.chr14 16486772 11 + 107702431 TGAATGTAAAA i chlSab2.chr14 C 0 I 1777 s manLeu1.NW_012101154v1 256289 11 - 409142 TGAATGTAAAA i manLeu1.NW_012101154v1 I 37911 C 0 s calJac3.chr14 14810651 10 + 108792865 TAAATGT-AAA i calJac3.chr14 C 0 I 1 s saiBol1.JH378124 27252903 11 - 28799539 CCAATGTAAAA i saiBol1.JH378124 C 0 I 1 s cebCap1.NW_016107537v1 74999 11 - 3620821 CTAATGTAAAA i cebCap1.NW_016107537v1 C 0 I 1 s otoGar3.GL873538 19648442 11 - 27850971 GAAATATAAGA i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=330379.000000 s hg38.chrUn_KI270746v1 25637 66 + 66486 CTTATCAATATCTAATG--CTTGTAGCAGTTTTACTTTGT--------AGAAGTATGTTAACGTCGGTAATT----GATG s panPan2.chr2A 89820391 66 + 114371477 CTTACTAACATCTAATG--CTTGTAGCAGTTCTACTTTGT--------AGAAGTTTGTTAACATTGGTAATT----GATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829658 66 - 998796 CTTATTAATATCTAATG--CTTGTAGCAGTTTTACTTTGT--------AGAAGTATGTTAACATTGGTAATT----GATG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73219316 66 + 94967081 CTTATTAATATCTAATG--CTTGCAGCAGTTTTACTTTGT--------AGAAGTATGTTAACATTGGTAATT----GGTG i nomLeu3.chr14 C 0 I 3705 s rheMac8.chr13 108474124 66 + 108979918 CTTACTAATGTCTAATG--CTTGTTTCAGTTTTACTTTGT--------AGAAGTATGTCAAAATTGATAATT----GATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17626221 66 + 111193037 CTTACTAATGTCTAATG--CTTGTTTCAGTTTTACTTTGT--------AGAAGTATGTCAAAATTGATAATT----GATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484901 66 - 11597128 CTTACTAATGTCTAATG--CTTGTTTCAGTTTTACTTTGT--------AGAAGTATGTCAAAATTGATAATT----GATG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4981191 66 - 5626091 CTTACTAATATCTAATG--CTTGTTTCAGTTTTACTTTGT--------AGAAGTATGTCAAAATTGATAATT----GATG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16488560 66 + 107702431 CTTATTAATATCTAATG--CTTGTAGCATTTTTACTTTAG--------AGATATATGTCAAAAATGAAAGTT----GATG i chlSab2.chr14 I 1777 C 0 s manLeu1.NW_012101154v1 256300 66 - 409142 CTTACTAATATCTAATG--CTTGTTTCAGTTTTACTTTGT--------AGAAGTATGTCAAAATTGATAATT----GATG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14810662 66 + 108792865 CTTCCTCATATCTAATG--CTTGTAGGAACTTTATTTTGT--------ATAAGTATGTCAAATTTGATAATTTCTC---- i calJac3.chr14 I 1 C 0 s saiBol1.JH378124 27252915 62 - 28799539 CTTGTTAATAACTAATC--TTTATAGGAGTTTTATTTTGT--------AGAAATATGTCAAATTCAATAATG-------- i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 75011 62 - 3620821 ATTGTTAATAACTAATC--TTTGTAGGAGTTTTATTTTGT--------AGAAATATGTCAAAATCGATAATG-------- i cebCap1.NW_016107537v1 I 1 C 0 s otoGar3.GL873538 19648453 73 - 27850971 --TATTAATATCTAATAATTTTGTGAAAATTTAATTTTTTCCTTTTTGACAAATATTTCAATATTAAAAACT----TAT- i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=84567.000000 s hg38.chrUn_KI270746v1 25703 19 + 66486 ATA-TTTTTATTGAGGCTAA s panPan2.chr2A 89820457 19 + 114371477 ATA-TTTTTATTGAGGCTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829724 19 - 998796 ATA-TTTTTATTGAGGCTAA i gorGor5.CYUI01015730v1 C 0 C 0 s rheMac8.chr13 108474190 19 + 108979918 ATA-TTTTTATTGAGGCTAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17626287 19 + 111193037 ATA-TTTTTATTGAGGCTAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10484967 19 - 11597128 ATA-TTTTTATTGAGGCTAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4981257 19 - 5626091 ATA-TTTTTATTGAGGCTAA i cerAty1.NW_012001187v1 C 0 T 30949 s chlSab2.chr14 16488626 19 + 107702431 ATA-TTTTTATTGAGGCTAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 256366 19 - 409142 ATA-TTTTTATTGAGGCTAA i manLeu1.NW_012101154v1 C 0 T 37909 s calJac3.chr14 14810728 20 + 108792865 ATACTTTTTGATGAGGTTTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27252977 20 - 28799539 ATACTTTTTCTTGAGGTTTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 75073 20 - 3620821 ATACTTTTTCTTGAGGTTTT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19648526 19 - 27850971 ACA-TTATTTCTTAGATGTG i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e nomLeu3.chr14 73219382 3705 + 94967081 I a score=479295.000000 s hg38.chrUn_KI270746v1 25722 93 + 66486 TATATTATCCTTTGGTGCCATGAGTGGATGAAGAAACTTTCAG-AAGGCTAAACTAGTGGATACAAGAAACTTAGGCAAATTATTACACCACAT s panPan2.chr2A 89820476 93 + 114371477 TATATTATCGTTTGTTGCCATGAGTGGATGAAGAAACTTTCAG-AAGGCTAAACTAGTGGATACAAGAAACTTAGGCAAATTATTACACCACAT i panPan2.chr2A C 0 I 1 s gorGor5.CYUI01015730v1 829743 93 - 998796 TATATTATCGTTTGTTGCCATGAGTGGATGAAGAAACTTTCAG-AAGGCTAAACTAGCGGATACAAGAAACTTAGGCAAATTATTACACCACAG i gorGor5.CYUI01015730v1 C 0 C 0 s rheMac8.chr13 108474209 93 + 108979918 TATATTATGCTTTGTTGCCATGAGTGGATGAAGAAATTTTCGG-AAGGCTAAACTAGCAGATACGAGAAACTCAGGCAAATTATTACACCACAT i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17626306 93 + 111193037 TATATTATGCTTTGTTGCCATGAGTGGATGAAGAAATTTTCGG-AAGGCTAAACTAGCAGATACGAGAAACTCAGGCAAATTATTACACCACAT i macFas5.chr13 C 0 I 1 s macNem1.NW_012014799v1 10484986 93 - 11597128 TATATTATGCTTTGTTGCCATGAGTGGATGAAGAAATTTTCGG-AAGGCTAAACTAGCAGATACGAGAAACTCAGGCAAATTATTACACCACAT i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 4950327 93 - 5626091 TATATTATACCTTGTTGCCATGAGTGATTGACAAAACTTTCTG-AAGGCTAAACTAGAAAATACAAGAAGTGTAGGCTCATTATTATACCACAT i cerAty1.NW_012001187v1 T 30949 I 43238 s chlSab2.chr14 16488645 93 + 107702431 TATATTAACCTTTGTGACCATGACTAGATGAAGAAACTTTCGA-AAGGCTCAACTAGTGGATACAAGAAAGTTAGGCAAATTATTACATCACAT i chlSab2.chr14 C 0 I 1851 s manLeu1.NW_012101154v1 218476 93 - 409142 TATATTATACCTTGTTGCCATGAGTGATTGACAAAACTTTCTG-AAGGCTAAACTAGAAAATACAAGAAGTGTAGGCTCATTATTATACCACAT i manLeu1.NW_012101154v1 T 37909 I 65736 s calJac3.chr14 14810748 93 + 108792865 TGTATTATGTCTTCTGGCCACGAATGGATGAAGAAACTTTCTG-AAGGCTATACTAGAGGATGCCAGAAATGTAGTCACATTATTACACCACAT i calJac3.chr14 C 0 I 1 s saiBol1.JH378124 27252997 94 - 28799539 TATATTATACCTTGTTGTCATGAGTGGATGAAGAAACTTTCAGAAAGGCTAAACTACAGGATACAAGAAATGTAGGCACATTATTACACCACAT i saiBol1.JH378124 C 0 I 1 s cebCap1.NW_016107537v1 75093 94 - 3620821 TATATTATACCTTGTTGTCATGAGTGGATGAAGAAACTTTCAGAAAGGCTAAACTAGAGGACACAAGAAATGTAGGCACATTATTACACCACAT i cebCap1.NW_016107537v1 C 0 I 1 s otoGar3.GL873538 19648545 92 - 27850971 TTTTATATACCTTCTTG-CATGAGTGGATCAAGAAACTTTAAG-ATGGCTAAACTAGAGGATGCAAGAAATGTAGACATACCAGTAACCCACAT i otoGar3.GL873538 C 0 I 1 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e nomLeu3.chr14 73219382 3705 + 94967081 I a score=406394.000000 s hg38.chrUn_KI270746v1 25815 83 + 66486 GGTGTGAGAAATAATGAATATT---ATCTACTAGATTTCAGGAAACATATGTCCAAGGTGATCAACTTAGTACACTTCCAC-------------TGAAG s panPan2.chr2A 89820570 83 + 114371477 GGTGTGAGAAATAATGAATATT---ATCTACTAGATTTCAGGAAACATATATCCAAGGCGATCAATTTAGGACACTTCCAC-------------TGAAG i panPan2.chr2A I 1 C 0 s gorGor5.CYUI01015730v1 829836 83 - 998796 GGTGTGAGAAATAATGAATATT---ATCTACTAGATTTCAGGAAACATATATCCAAGGTGATCAATTTAGGACACTTCCAC-------------TGAAG i gorGor5.CYUI01015730v1 C 0 C 0 s rheMac8.chr13 108474303 82 + 108979918 GGTGTGAGAAATAACGTGTATT---ATCTACTA-ATTTCAGGACACATATATCCAAGGTGATCAATTTAGGACACTTCCAC-------------TGAAG i rheMac8.chr13 I 1 I 1859 s macFas5.chr13 17626400 82 + 111193037 GGTGTGAGAAATAACGTGTATT---ATCTACTA-ATTTCAGGACACATATATCCAAGGTGATCAATTTAGGACACTTCCAC-------------TGAAG i macFas5.chr13 I 1 I 1858 s macNem1.NW_012014799v1 10485080 82 - 11597128 GGTGTGAGAAATAACGAGTATT---ATCTACTA-ATTTCAGGACACATATATCCAAGCTGATCAATTTAGGACACTTCCAC-------------TGAAG i macNem1.NW_012014799v1 I 1 I 1859 s cerAty1.NW_012001187v1 4993658 83 - 5626091 GGTGTGAGAAATGATGAATATT---ATCTACTAGATTTCAGGAAACATATATCCAAGTTGATCAATTTAGGACAGTTCCAC-------------TGAAG i cerAty1.NW_012001187v1 I 43238 C 0 s chlSab2.chr14 16490589 83 + 107702431 GGTGTGAGAAATAATGAATATT---ATTTACTCCGATTCCGGAAACATATATCCAAGCTGATCAATTTAGGATACTTCCAT-------------TTAAA i chlSab2.chr14 I 1851 C 0 s manLeu1.NW_012101154v1 284305 83 - 409142 GGTGTGAGAAATGATGAATATT---ATCTACTAGATTTCAGGAAACATATATCCAAGTTGATCAATTTAGGACAGTTCCAC-------------TGAAG i manLeu1.NW_012101154v1 I 65736 C 0 s calJac3.chr14 14810842 83 + 108792865 GATATGGGAAATAAAGCATATT---ATATAGTAGAATTCACCAAACATATATGTAAGTTGCTCAATTCAGGACACTTCCAC-------------TGAGA i calJac3.chr14 I 1 C 0 s saiBol1.JH378124 27253092 83 - 28799539 GGTATGAAAAATAATGAATATT---ATCTGCTAGGATTCACTAAACATATATCCAGGCTGATCAATTGAGGACATTTCCAC-------------TGAAG i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 75188 96 - 3620821 GGTATGAAAAATAATGAATATT---ATCTGCTAGGATTCACTAAACATATATCCAGCCTGATCAATTGAGGACATTTCCACTCAATTGGACTCATAAAG i cebCap1.NW_016107537v1 I 1 C 0 s otoGar3.GL873538 19648638 85 - 27850971 GGTATGGAAAAAGATGAATATTTTCATTAACTATTATTCTACAAGTATATATCTAAGCTGATCAATTCAGAACATTTAT-C-------------TGATG i otoGar3.GL873538 I 1 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e nomLeu3.chr14 73219382 3705 + 94967081 I a score=232264.000000 s hg38.chrUn_KI270746v1 25898 49 + 66486 AGACATGaaatgtacatttaactgaattgtcattgtaat-tgtGTATGTT s panPan2.chr2A 89820653 48 + 114371477 AGACATGAAGCG-ACATTTAACTGAATTGTCATAGTAAT-TCTGTACCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829919 49 - 998796 AGACGTGAAGCGTACATTTAACTGAATTGTCATTGTAAT-TGTGTACCTT i gorGor5.CYUI01015730v1 C 0 C 0 s rheMac8.chr13 108476244 49 + 108979918 AGACGTGAAATGTCCATTCAACTAAAGTGTCATTGTAAT-TGTGTAAGTT i rheMac8.chr13 I 1859 C 0 s macFas5.chr13 17628340 49 + 111193037 AGACGTGAAATGTCCATTCAACTAAAGTGTCATTGTAAT-TGTGTAAGTT i macFas5.chr13 I 1858 C 0 s macNem1.NW_012014799v1 10487021 49 - 11597128 AGACGTGAAATGTCCATTCAATTAAAGTGTCATTGTAAT-TGTGTAAGTT i macNem1.NW_012014799v1 I 1859 C 0 s cerAty1.NW_012001187v1 4993741 49 - 5626091 AGACGTGAAGTGTACATTCAACTGAAGTGTCATTGTAAT-CATGTATCTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16490672 49 + 107702431 AGACGTGAAATGTTCATTCAACTAAAGTGTCATTGTAAT-TGTGTAAGTT i chlSab2.chr14 C 0 I 1820 s manLeu1.NW_012101154v1 284388 49 - 409142 AGACGTGAAGTGTACATTCAACTGAAGTGTCATTGTAAT-CATGTATCTT i manLeu1.NW_012101154v1 C 0 I 1 s calJac3.chr14 14810925 49 + 108792865 AGTTGTGAAGTGTACATTTGACTAAAGTGTCATTGTCAT-TTTGTACCTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27253175 49 - 28799539 AATCATGAAGTGTACGTTCAACCAAAGTGTCATTGTGAT-TGTATATCTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 75284 49 - 3620821 AGTCATGAAGTGTACATTCAATTGAAGTGTCATTGTGAT-TGTGTATCTT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19648723 50 - 27850971 AGAAATGAATTATACATTCAAATGAATTGTCATCACAACAAATGTACTTC i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e nomLeu3.chr14 73219382 3705 + 94967081 I a score=9332.000000 s hg38.chrUn_KI270746v1 25947 2 + 66486 CT s panPan2.chr2A 89820701 2 + 114371477 CT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829968 2 - 998796 CT i gorGor5.CYUI01015730v1 C 0 C 0 s rheMac8.chr13 108476293 2 + 108979918 CT i rheMac8.chr13 C 0 I 10161 s macFas5.chr13 17628389 2 + 111193037 CT i macFas5.chr13 C 0 I 1 s macNem1.NW_012014799v1 10487070 2 - 11597128 CT i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 4993790 2 - 5626091 CC i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 16492541 2 + 107702431 CT i chlSab2.chr14 I 1820 C 0 s manLeu1.NW_012101154v1 284438 2 - 409142 CC i manLeu1.NW_012101154v1 I 1 C 0 s calJac3.chr14 14810974 2 + 108792865 CT i calJac3.chr14 C 0 I 1 s saiBol1.JH378124 27253224 2 - 28799539 TT i saiBol1.JH378124 C 0 I 1 s cebCap1.NW_016107537v1 75333 2 - 3620821 TT i cebCap1.NW_016107537v1 C 0 I 1 s otoGar3.GL873538 19648773 2 - 27850971 CT i otoGar3.GL873538 C 0 I 1 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e nomLeu3.chr14 73219382 3705 + 94967081 I a score=737965.000000 s hg38.chrUn_KI270746v1 25949 141 + 66486 ACTTATTGGGCAAGTTAAAGGGCACGATGAACGTTTGTAGTATAATGGTG--TAAATCCTTCTAATTTCTTGAAAGAAAGACATACTGGGTCATG-TACCACCTGCTTTGACATTGATTC--TCAGGTGTGTGAGTTACACCTCTG s panPan2.chr2A 89820703 141 + 114371477 AGTTATTGGGCAAGTTAAAGGGCATGATGAATGTTTGTAGTATAATGGTG--TAAATCCTTCTGATTTCTTGCAAGAAAGACATGCAGGATCATG-TACCACCTGCTTTGACATTGATTC--TCAGGTGTGTGAGTTACTCCTCTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 829970 141 - 998796 AGTTATTGGGCAAGTTAAAGGGCATGATGAATGTTTGTAGTATAATGGTG--TAAATCCTTCTGATTTCTTTCAAGAAAGACATGCGGGATCATG-TACCACCTGCTTTGACATTGATTC--TCAGGTGTGTGAGTTACTCCTCTG i gorGor5.CYUI01015730v1 C 0 C 0 s rheMac8.chr13 108486456 138 + 108979918 AGTTATTGGAAATGTTAAAAAGCATGATGAATGTTTGTGGTATAATGGTG--TAAATC---CTAATTTCTTGCATGAAAGACATGAGGGATCATG-TACTACCTGCTTTGACATTGATTC--TCAGGTGTATGAGTTGCTCCTCTG i rheMac8.chr13 I 10161 I 12 s macFas5.chr13 17628392 141 + 111193037 AGTTATCAGGCAAGTTAAAGAGCATGATGAATGTTTGTAGTATAATGGTG--TAAATCCTTCTGCTTTGTTGCCTGAAAGACATGCAGGATCATG-TACCACCTGCTTTGACATTGTTTC--TCAGGTGTATGAATTGCTGCTCTG i macFas5.chr13 I 1 I 10170 s macNem1.NW_012014799v1 10487073 141 - 11597128 AGTTATCAGGCAAGTTAAAGAGCATGATGAATGTTTGTAGTATAATGGTG--TAAATCCTTCTGCTTTGTTGCCTGAAAGACATGCAGGATCATG-TACCACCTGCTTTGACATTGTTTC--TCAGGTGTATGAATTGCTGCTCTG i macNem1.NW_012014799v1 I 1 I 10166 s cerAty1.NW_012001187v1 4993793 138 - 5626091 AGTTATTGGAAATGTTAAAAAGCATAATGAATGTTTGTGGTATAATGGTG--TAAATC---CTAATTTCTTGCATGAAAGACATGAGGGATCGTA-TACCACCTGCTTTGACATTGATTC--TCAGGTGTATGAGTTGCTCCTCTG i cerAty1.NW_012001187v1 I 1 I 12 s chlSab2.chr14 16492543 141 + 107702431 AGTTATAGGACGAGTTAAAGAGCGTGATGAATGTTTGTAGTATAATTATG--TAAATCCTTCTGATTTCCTGCATGAAAGACATGCGGGATCGTG-TACCACCTGCTTTGACATTGATTC--TCAGGTGTATGAGTTGCTCCACTG i chlSab2.chr14 C 0 I 11 s manLeu1.NW_012101154v1 284440 138 - 409142 AGTTATTGGAAATGTTAAAAAGCATAATGAATGTTTGTGGTATAATGGTG--TAAATC---CTAATTTCTTGCATGAAAGACATGAGGGATCGTA-TACCACCTGCTTTGACATTGATTC--TCAGGTGTATGAGTTGCTCCTCTG i manLeu1.NW_012101154v1 C 0 I 12 s calJac3.chr14 14810977 141 + 108792865 AATTATCAGGCAAGTCAAAGAGCATGATGAATATCTGTAGTATAATGGGA--TAAATCCTTCTGATGTCTTGCATGAAAAACATGCGGGAGCCTT-TACCATCTGCTTTGACATTGATTC--CCAGGTGTATGAGTTGCCTTTCTG i calJac3.chr14 I 1 I 12 s saiBol1.JH378124 27253227 140 - 28799539 AGTTATCAGGCAAGTTAAAGAGCATGATGAATGTTTGTAGTATAATGGTA--TAAATCCTTCTGATGTCTTTCATGAAAGACAT-CAGGAGTATG-TACCATCTGCTTTGACATTGATTC--CCAGGTGTATGAGTTGCTCCTCTG i saiBol1.JH378124 I 1 I 12 s cebCap1.NW_016107537v1 75336 141 - 3620821 AGTTATCAGGCAAGTTAAAGAGCATGATGAATGTTTGTAGTATAATGGTA--TAAATCCTTCTGATGTCTTTCATGAAAGACATGCAGGAGTATG-TACCACCTGCTTTGACATTGATTC--TCAGGTGTATAAGTTGCTCGTCTG i cebCap1.NW_016107537v1 I 1 I 12 s otoGar3.GL873538 19648776 146 - 27850971 AATTACTGGACAAATTGAATAATATGATAAATATTCTTAGCATAATGGTATTTAAATGATTCTGATGTGTTGCATTAAAGATATTATGCAGCATTCTGCCATCAGCTTTGATATTTATCCTGTCAGGACCATAATTTGCTCCTTTG i otoGar3.GL873538 I 1 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e nomLeu3.chr14 73219382 3705 + 94967081 I a score=238627.000000 s hg38.chrUn_KI270746v1 26090 39 + 66486 ------------ATTTGTCCTCATCACTCAGCATATCCACATTGATAT-TGA s panPan2.chr2A 89820844 39 + 114371477 ------------ATTTGTCCTCATCACTCGGCATATCCACATTGATAT-TGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830111 39 - 998796 ------------ATTTGTCCTCATCACTCGGCATATCCACATTGATAT-TGA i gorGor5.CYUI01015730v1 C 0 C 0 s rheMac8.chr13 108486606 39 + 108979918 ------------ATTTGTCCTCATCACTCGGCATATCCACATTGATAT-TGA i rheMac8.chr13 I 12 C 0 s macFas5.chr13 17638703 39 + 111193037 ------------ATTTGTCCTCATCACTCGGCATATCCACATTGATAT-TGA i macFas5.chr13 I 10170 C 0 s macNem1.NW_012014799v1 10497380 39 - 11597128 ------------ATTTGTCCTCATCACTCGGCATATCCACATTGATAT-TGA i macNem1.NW_012014799v1 I 10166 C 0 s cerAty1.NW_012001187v1 4993943 39 - 5626091 ------------ATTTGTCCTCATCACTCGGCATATCCACATTGATAT-TGA i cerAty1.NW_012001187v1 I 12 C 0 s chlSab2.chr14 16492695 39 + 107702431 ------------ATTTGTCCTCATCACTGGGCATATCCACATCGATAT-TGA i chlSab2.chr14 I 11 C 0 s manLeu1.NW_012101154v1 284590 39 - 409142 ------------ATTTGTCCTCATCACTCGGCATATCCACATTGATAT-TGA i manLeu1.NW_012101154v1 I 12 C 0 s calJac3.chr14 14811130 39 + 108792865 ------------ATTGGTCCTCATTACTCAGCATATCCACATTGATAA-TAA i calJac3.chr14 I 12 C 0 s saiBol1.JH378124 27253379 39 - 28799539 ------------ATTGGTCCTCATTGCTCAGCATATCCACATTGATAC-TGA i saiBol1.JH378124 I 12 C 0 s cebCap1.NW_016107537v1 75489 39 - 3620821 ------------ATTGGTCCTCATCACTCAGCATATCCACACTGATAT-TGA i cebCap1.NW_016107537v1 I 12 T 5604 s otoGar3.GL873538 19648922 52 - 27850971 CTTTAAGATCATTTTTCTCCTCATCAATCAGCATGTTCACATTGGTATATGA i otoGar3.GL873538 C 0 I 4 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e nomLeu3.chr14 73219382 3705 + 94967081 I a score=488023.000000 s hg38.chrUn_KI270746v1 26129 111 + 66486 CACGGTTTTATTTTAGTTTTAGACATATCACGAATCATACCATGTT-TGAAATTGTAAGGGTATATTTTGT-GAAGCCTGTATTCCT---TTTTTTTCAGTGTATTTCTGTCGTGT s panPan2.chr2A 89820883 111 + 114371477 CACGGTTTTATTTTAGTTTTAGATGTATCACAAATCATACCACGTT-TGAAATTGTAGCGGTATATTTTGT-GAAGCCTGTATTCCT---TTTTTTTCAGTGTATTTCTGTCGTGT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830150 108 - 998796 CACGGTTTTATTTTAGTTTTAGATGTATCACAAATCATACCACATT-TGAAATTGTAAT-GTATATTTTGT-GAAGCCTGTATTCC----TTTTTTTCAGTGTA-TTCTGTCGTGT i gorGor5.CYUI01015730v1 C 0 C 0 s rheMac8.chr13 108486645 111 + 108979918 CATGGTTTTACTTTAGTTTTAGACATATGACAAATCATACCGTGTT-TGAAATTGTAAGGGTATATTTTGT-GAGGCCTGTATTCCT---TTTCTTTCTGTGTATTTCTATCATGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17638742 111 + 111193037 CATGGTTTTACTTTAGTTTTAGACATATGACAAATCATACCGTGTT-TGAAATTGTAAGGGTATATTTTGT-GAGGCCTGTATTCCT---TTTCTTTCAGTGTATTTCTATCATGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10497419 111 - 11597128 CATGGTTTTACTTTAGTTTTAGACATATGACAAATCATACCGTGTT-TGAAATTGTAAGGGTATATTTTGT-GAGGCCTGTATTCCT---TTTCTTTCAGTGTATTTCTATCATGT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4993982 111 - 5626091 CATGGTTTTACTTTAGTTTTAGACATATGACAAATCATACCGTGTT-TGAAATTGTAAGGGTATATTTTGT-GAAGCCTGTATTCCT---TTTCTTTCAGTGTATTTCTATCATGT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16492734 110 + 107702431 CACGGTTTTATTTTAGTTTTAGACAAATGACAAATCATACCATGTT-TGCAATTGTAAGGGTATATTTCAT-GAAGCCTGTGTTCCC---TTT-TGTCAGTGTATTTCTGTCATGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 284629 111 - 409142 CATGGTTTTACTTTAGTTTTAGACATATGACAAATCATACCGTGTT-TGAAATTGTAAGGGTATATTTTGT-GAAGCCTGTATTCCT---TTTCTTTCAGTGTATTTCTATCATGT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811169 112 + 108792865 CAAGTTTTTATTGTAGTAATAGAAATATGAAAAATATTATTACTTT-TGAAATTGGAAGTTTATATTTCGT-GAAGCCTTTGTATTT--ATTTTCTTCAGTGTATTTCTGTCATGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27253418 112 - 28799539 TAC-TTTTTATTTTGGTAATATACATATGATGCATAATATCTCTTTGTAATTTTATAACTGTATATTTTGTGGAAGCCTGTATTCCT--ATTGTCTTCTGTATACTTCC-TCATGT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 69924 112 - 3620821 CACTGCTTTATTTGAGTTTTAGACATATGACAAATCATATCACATT-TGACTGTGTAAGTGTATATATTTT-GAAGACTGTATTCCT--GTTTTCTTCAGTGTATTTCTGTCATGT i cebCap1.NW_016107537v1 T 5604 C 0 s otoGar3.GL873538 19648978 106 - 27850971 CACTTTTCTATTTTAGT----GATGTCTGAAACATC---TCACTTT-TGAAATCATAACTGCATGTTTTAT-TAA-CCTATATTCCTATATTTTCTCCCTTATATTTCTGTCATGT i otoGar3.GL873538 I 4 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e nomLeu3.chr14 73219382 3705 + 94967081 I a score=233830.000000 s hg38.chrUn_KI270746v1 26240 43 + 66486 TCCAGTCTC-CAGACAAAAAGTAGGAA------ACATCAAAGCCTACACT s panPan2.chr2A 89820994 43 + 114371477 TCCAGTCTC-CAGACAAAAGGTAGAAA------ACATCAAAGCCTACACT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830258 43 - 998796 TCCAGTCTC-CAGACAAAAGGTAGAAA------ACATCAAAGCCTACACT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223087 43 + 94967081 TTTAGTCCC-AAGAAACAAAGTATAAA------ATATCAAAGCCTACAGT i nomLeu3.chr14 I 3705 C 0 s rheMac8.chr13 108486756 43 + 108979918 TTCAGTCTC-CAGACACAAAGTAGAAA------ACATCAAAGCCTACACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17638853 43 + 111193037 TTCAGTCTC-CAGACACAAAGTAGAAA------ACATCAAAGCCTACACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10497530 43 - 11597128 TTCAGTCTC-CAGACACAAAGTAGAAA------ACATCAAAGCCTACACT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4994093 43 - 5626091 TTCAGTCTC-CAGACACAAAGTAGAAA------ACATCAAAGCCTACACT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16492844 43 + 107702431 TCCAGTCCC-CAGACACAAAGTAGAAA------ACATCAAAGCCTACACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 284740 43 - 409142 TTCGGTCTC-CAGACACAAAGTAGAAA------ACATCAAAGCCTACACT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811281 43 + 108792865 TCCTGTTTC-AAGACACCAAGTTTAAA------ACATCTAAGCATCCACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27253530 44 - 28799539 TCCTGTCCCAAAGACATAAACTATAAA------ACATCAAATTCTACACT i saiBol1.JH378124 C 0 I 524 s cebCap1.NW_016107537v1 70036 43 - 3620821 TGCTGTCCC-AAGACACAAAGTATAAA------GTATCAAAGCCTACACT i cebCap1.NW_016107537v1 C 0 I 6132 s otoGar3.GL873538 19649084 46 - 27850971 ---TGCGTC-CTAACCAAAAAAATCAATGAACCACCCCAAAACCTAAAAT i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=278885.000000 s hg38.chrUn_KI270746v1 26283 41 + 66486 AGT-----------GCAGGCAGGAAGATACAGCTTGATAATAACAC--------TGCATG s panPan2.chr2A 89821037 41 + 114371477 AGT-----------ACAGGCAGGAAGATACAGCTTGATGCTAACAC--------TGCATG i panPan2.chr2A C 0 I 1 s gorGor5.CYUI01015730v1 830301 41 - 998796 AGT-----------ACAGGCAGGAAGATACAGCTTGATGCTAACAC--------TGCATG i gorGor5.CYUI01015730v1 C 0 I 1 s nomLeu3.chr14 73223130 49 + 94967081 AAT-----------ACAGGCAGGAGGATATAACTTGATGCTAACATGCTATCCATGCATT i nomLeu3.chr14 C 0 I 1 s rheMac8.chr13 108486799 41 + 108979918 AAT-----------ACAGGCAGGAAGATACAGCTTGATGCTAACAC--------TACATG i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17638896 41 + 111193037 AAT-----------ACAGGCAGGAAGATACAGCTTGATGCTAACAC--------TACATG i macFas5.chr13 C 0 I 3752 s macNem1.NW_012014799v1 10497573 41 - 11597128 AAT-----------ACAGGCAGGAAGATACAGCTTGATGCTAACAC--------TACATG i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 4994136 41 - 5626091 AAT-----------ACAGGCAGGAAGATACAGCTTGATGCTAACAC--------TACATG i cerAty1.NW_012001187v1 C 0 I 3965 s chlSab2.chr14 16492887 41 + 107702431 AAT-----------GCAGGCAGGAGGATACGGCTTGATGCTAACAC--------TGCATG i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 284783 41 - 409142 AAT-----------ACAGGCAGGAAGATACAGCTTGATGCTAACAC--------TACATG i manLeu1.NW_012101154v1 C 0 I 3126 s calJac3.chr14 14811324 41 + 108792865 AAT-----------ACAGGCAGAAGAATACAGCTTGGTGCTAACAC--------TGCATG i calJac3.chr14 C 0 I 1 s saiBol1.JH378124 27254098 41 - 28799539 AGT-----------ACAGGCAGGAGGATACAGCTTGATGCTAACAC--------TGCATT i saiBol1.JH378124 I 524 I 1 s cebCap1.NW_016107537v1 76211 41 - 3620821 AGT-----------ACAGGCAGGAGGATACAGCTTGATGCTAACAC--------TGCATT i cebCap1.NW_016107537v1 I 6132 I 1 s otoGar3.GL873538 19649130 52 - 27850971 AATCATTTTCATAGACAAGCATCAGGATTCAGCTTGATACTAACTC--------TGCATG i otoGar3.GL873538 C 0 I 1 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=479783.000000 s hg38.chrUn_KI270746v1 26324 75 + 66486 ATGTATGGAT-AA-ATTTATCATACGTACATATGAGTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTCAGAAA s panPan2.chr2A 89821079 75 + 114371477 ATGTTTGAAT-AA-ATTTATCATATTCACATATGAGTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTCAGAAA i panPan2.chr2A I 1 C 0 s gorGor5.CYUI01015730v1 830343 75 - 998796 ATGTTTGAAT-AA-ATTTATCATATGTACATATGAGTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTCAGAAA i gorGor5.CYUI01015730v1 I 1 C 0 s nomLeu3.chr14 73223180 76 + 94967081 ATGTATGGAT-AACATTTATCATATGTACATATGCGTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTCAGAAA i nomLeu3.chr14 I 1 C 0 s rheMac8.chr13 108486841 75 + 108979918 ATGTATGAAT-AA-ATTTATCATATTTACATATGAGTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCCCAGAAA i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17642689 75 + 111193037 ATGTATGGAT-AA-CTTTATCATATGTACATATGAGTGATTGTGTATCCCTTTTGCTTTTCAGTGTCTTCTCAGAAA i macFas5.chr13 I 3752 C 0 s macNem1.NW_012014799v1 10497615 75 - 11597128 ATGTATGAAT-AA-ATTTATCATATTTACATATGAGTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCCCAGAAA i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 4998142 75 - 5626091 ATGTATGGAT-AA-CTTTATCATATTTACATATGAGTGATTGTGTATCCCTTTTGCTTTTCAGTGTCTTCTCAGAAA i cerAty1.NW_012001187v1 I 3965 I 1899 s chlSab2.chr14 16492929 74 + 107702431 ATGTATGGA--AA-ATTTATCATATTTACATACGAGTGATTATGTATCCGTTTTGTTTTTCAGTGTCTTCTCAGAAA i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 287950 75 - 409142 ATGTATGGAT-AA-CTTTATCATATTTACATATGAGTGATTGTGTATCCCTTTTGCTTTTCAGTGTCTTCTCAGAAA i manLeu1.NW_012101154v1 I 3126 I 16268 s calJac3.chr14 14811366 74 + 108792865 ATACATGGAT-GC-CTTTATTATATTTACATATGATTGATTACATATCCCTTTTGA-TTTCAGTGTATTCTCAGAAA i calJac3.chr14 I 1 C 0 s saiBol1.JH378124 27254140 76 - 28799539 ATGTATGGTTGGT-TTTTATCATAATTACATATGATTGACTATATATCCATTTTGCTTTTCAGTGTCTTCTCAGAAA i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 76253 75 - 3620821 ATGTATGGTT-GG-TTTTATCATAGTTACATATGATTGATTATATATCCATTTTGCTTTTCAGTGTCTTCTCAGAAA i cebCap1.NW_016107537v1 I 1 C 0 s otoGar3.GL873538 19649183 75 - 27850971 ACGTATAGTT-GG-CTTGGTCATACTTACCTATGACTGATTGTATGTCCCTTTTACATTTTAGAGTCTCCTAAGAGA i otoGar3.GL873538 I 1 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=21684.000000 s hg38.chrUn_KI270746v1 26399 8 + 66486 ------CAACCGGC s panPan2.chr2A 89821154 8 + 114371477 ------CAACCAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830418 8 - 998796 ------CAACCAGC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223256 8 + 94967081 ------TAACCAGC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108486916 8 + 108979918 ------CAACCAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17642764 8 + 111193037 ------AAAAAAGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10497690 8 - 11597128 ------CAACCAGC i macNem1.NW_012014799v1 C 0 C 0 s chlSab2.chr14 16493003 8 + 107702431 ------CAACCAGT i chlSab2.chr14 C 0 C 0 s calJac3.chr14 14811440 8 + 108792865 ------CAGCTGGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254216 8 - 28799539 ------CAACCAGC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76328 8 - 3620821 ------CAACCGGC i cebCap1.NW_016107537v1 C 0 T 65525 s otoGar3.GL873538 19649258 8 - 27850971 TATCCTCA------ i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e manLeu1.NW_012101154v1 288025 16268 - 409142 I e cerAty1.NW_012001187v1 4998217 1899 - 5626091 I a score=27526.000000 s hg38.chrUn_KI270746v1 26407 8 + 66486 TGAGAAGG s panPan2.chr2A 89821162 8 + 114371477 TGAGAGGG i panPan2.chr2A C 0 I 4 s gorGor5.CYUI01015730v1 830426 8 - 998796 TGAGAAGG i gorGor5.CYUI01015730v1 C 0 I 4 s nomLeu3.chr14 73223264 8 + 94967081 TGAGAAGG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108486924 8 + 108979918 CTTGAAGG i rheMac8.chr13 C 0 I 3755 s macFas5.chr13 17642772 8 + 111193037 CTTGAAGG i macFas5.chr13 C 0 I 1887 s macNem1.NW_012014799v1 10497698 8 - 11597128 CTTGAAGG i macNem1.NW_012014799v1 C 0 I 4 s chlSab2.chr14 16493011 8 + 107702431 CGTGAAGG i chlSab2.chr14 C 0 I 4 s calJac3.chr14 14811448 8 + 108792865 CATAAAGG i calJac3.chr14 C 0 I 4 s saiBol1.JH378124 27254224 8 - 28799539 CTGGAAGG i saiBol1.JH378124 C 0 I 4 s cebCap1.NW_016107537v1 10811 8 - 3620821 CTTGAAGG i cebCap1.NW_016107537v1 T 65525 I 4 s otoGar3.GL873538 19649266 8 - 27850971 CTTGAAGG i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e manLeu1.NW_012101154v1 288025 16268 - 409142 I e cerAty1.NW_012001187v1 4998217 1899 - 5626091 I a score=188686.000000 s hg38.chrUn_KI270746v1 26415 36 + 66486 ---TAAACTCT-CCTTTATATTTTTTATTAGTAACTGTAT s panPan2.chr2A 89821174 36 + 114371477 ---TAAAGTCT-CATTTATACGTTGAACTAGTAACTGTAT i panPan2.chr2A I 4 C 0 s gorGor5.CYUI01015730v1 830438 36 - 998796 ---TAAAGTCT-CATTTATACGTTGAACTAGTAACTGTAT i gorGor5.CYUI01015730v1 I 4 C 0 s nomLeu3.chr14 73223272 36 + 94967081 ---TAAAGTCT-CATTTATATGTTGAACTATTAACTATAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108490687 36 + 108979918 ---TAAAATCT-CATTTATATTTTGAACTAGTAAATGTAT i rheMac8.chr13 I 3755 C 0 s macFas5.chr13 17644667 36 + 111193037 ---TAAACTCT-CATTTACATTTTGAACTAGTAACTGGAT i macFas5.chr13 I 1887 I 3725 s macNem1.NW_012014799v1 10497710 36 - 11597128 ---TAAAATCT-CATTTATATTTTGAACTAGTAAATGTAT i macNem1.NW_012014799v1 I 4 C 0 s cerAty1.NW_012001187v1 5000116 36 - 5626091 ---TAAACTCT-CATTTATATTTTGAACTAGTAACTGGAT i cerAty1.NW_012001187v1 I 1899 C 0 s chlSab2.chr14 16493023 36 + 107702431 ---TAAATTTT-TATTTATATTTTGAACTAGTAAATGCAG i chlSab2.chr14 I 4 C 0 s manLeu1.NW_012101154v1 304293 36 - 409142 ---TAAATTTT-CATTTATATTTTGTACTAGTAACTGTAG i manLeu1.NW_012101154v1 I 16268 C 0 s calJac3.chr14 14811460 36 + 108792865 ---TACACTCT-CATTTATATTTTGAACTATTAATTGTAT i calJac3.chr14 I 4 C 0 s saiBol1.JH378124 27254236 36 - 28799539 ---TACTCTTT-CATTTATATTTTGAATTACTAATTATAT i saiBol1.JH378124 I 4 C 0 s cebCap1.NW_016107537v1 10823 36 - 3620821 ---TACACTCT-CATTTGTATTTTGAAGTATTAACTGTAT i cebCap1.NW_016107537v1 I 4 C 0 s otoGar3.GL873538 19649274 40 - 27850971 TAATAACTTTTATCTTTTTGTCTTGAATTATTAACTACAC i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=63716.000000 s hg38.chrUn_KI270746v1 26451 13 + 66486 GGTCTTTGAAACA s panPan2.chr2A 89821210 13 + 114371477 AGTCTATGAAACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830474 13 - 998796 AGTCTATGAAACC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223308 13 + 94967081 AGTCTATGAAACC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108490723 13 + 108979918 AATCTATGAAACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17648428 13 + 111193037 AGTCTATGAAACC i macFas5.chr13 I 3725 C 0 s macNem1.NW_012014799v1 10497746 13 - 11597128 AGTCTATGAAACA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5000152 13 - 5626091 AGTCTATGAGATA i cerAty1.NW_012001187v1 C 0 I 1901 s chlSab2.chr14 16493059 13 + 107702431 AGTCTATGAAACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 304329 12 - 409142 AGTCTATG-AACC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811496 13 + 108792865 AGTCTATGAAATA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254272 13 - 28799539 AATCTATGAAGTA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 10859 12 - 3620821 AGTCTGTGAAA-A i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19649314 13 - 27850971 ATTGTATGGAATC i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=27199.000000 s hg38.chrUn_KI270746v1 26464 5 + 66486 TTCTT s panPan2.chr2A 89821223 5 + 114371477 TACTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830487 5 - 998796 TACTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223321 5 + 94967081 TACTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108490736 5 + 108979918 CACTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17648441 5 + 111193037 TACTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10497759 5 - 11597128 TACTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5002066 5 - 5626091 TACTT i cerAty1.NW_012001187v1 I 1901 C 0 s chlSab2.chr14 16493072 5 + 107702431 TACTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 304341 5 - 409142 TACTT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811509 5 + 108792865 TATTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254285 5 - 28799539 TCTAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 10871 5 - 3620821 TACTT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19649327 5 - 27850971 TACAT i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104203228 29540 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=28060.000000 s hg38.chrUn_KI270746v1 26469 4 + 66486 TATT s panPan2.chr2A 89821228 4 + 114371477 TATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830492 4 - 998796 TATT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223326 4 + 94967081 TATG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108490741 4 + 108979918 TATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17648446 4 + 111193037 TATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10497764 4 - 11597128 TATT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5002071 4 - 5626091 TATT i cerAty1.NW_012001187v1 C 0 C 0 s papAnu3.chr13 104232768 4 + 128036923 TATG i papAnu3.chr13 I 29540 I 1973 s chlSab2.chr14 16493077 4 + 107702431 TATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 304346 4 - 409142 TATT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811514 4 + 108792865 TATG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254290 4 - 28799539 TATG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 10876 4 - 3620821 TATG i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19649332 4 - 27850971 TATT i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=42847.000000 s hg38.chrUn_KI270746v1 26473 6 + 66486 TATTGA s panPan2.chr2A 89821232 6 + 114371477 TATTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830496 6 - 998796 TATTGA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223330 6 + 94967081 TATTGA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108490745 6 + 108979918 TATTGA i rheMac8.chr13 C 0 I 1880 s macFas5.chr13 17648450 6 + 111193037 TGTTGA i macFas5.chr13 C 0 I 1730 s macNem1.NW_012014799v1 10497768 6 - 11597128 TATTGA i macNem1.NW_012014799v1 C 0 I 3750 s cerAty1.NW_012001187v1 5002075 6 - 5626091 TATTGA i cerAty1.NW_012001187v1 C 0 I 2298 s chlSab2.chr14 16493081 6 + 107702431 TATTGA i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 304350 6 - 409142 TATTAA i manLeu1.NW_012101154v1 C 0 I 1 s calJac3.chr14 14811518 6 + 108792865 TATTGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254294 6 - 28799539 TATTGA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 10880 6 - 3620821 TGCTGA i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19649336 6 - 27850971 TATTAA i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104232772 1973 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=450535.000000 s hg38.chrUn_KI270746v1 26479 71 + 66486 T-AATTCACTCCAAATTACTTTCAGGCTACAAGTGACAAGACAGATTCTGTTTTGAATATAGCTacagaaat s panPan2.chr2A 89821238 70 + 114371477 T--TTTTTTTTCAAATCCCATTCAGGCTGCAAGTGACGAGAAAGATTCTGTTTCGAATATAGCCACAGAAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830502 72 - 998796 TTATTTTGCTTCAAATCCCATTCAGGCTGCAAGTGACGAGAAAGATTCTGTTTCGAATATAGCCACAGAAAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223336 72 + 94967081 TTATTTTGTTTCAAATCCCATTCAGGCTACCAGTGACGAGAAAGATTCTGTTTCGAATATAGCCACAGAAAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108492631 71 + 108979918 -TATTTTGTTTCAAATTCCATTCAGGCTACAAGTGACAAGGAAGATTCTGTTTCAAATATAGCCACAGAAAT i rheMac8.chr13 I 1880 C 0 s macFas5.chr13 17650186 71 + 111193037 -TATTTTGTTTCAAATTCCATTCAGGCTACAAGTGACAAGGAAGATTCTGTTTCGAATATAGCCACAGAAAT i macFas5.chr13 I 1730 C 0 s macNem1.NW_012014799v1 10501524 71 - 11597128 -TATTTTGTTTCAAATTCCATTCAGACGACAAGTGACAAGGAAGATTCTGTTTCGAATACAGCCACAGAAAT i macNem1.NW_012014799v1 I 3750 C 0 s cerAty1.NW_012001187v1 5004379 71 - 5626091 -TATTTTGTTTCAAATTCCATTCAGGCTACAAGTGACAAGAAAGATTCTGTTTCGAATATAGTCACAGAAAT i cerAty1.NW_012001187v1 I 2298 C 0 s chlSab2.chr14 16493088 71 + 107702431 -TATTTTATTTCAAATTCCGTTCAGGTTACAAGTGACGAGAAAGATTCTGTTTCAAATATAGCCACAGAAAT i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 304357 71 - 409142 -TATTTTGTTTCAAATTCCATTCAGGTTATAAGTGACGAGAAAGATTCTGTTTTGAATATAGCTACAGGAAT i manLeu1.NW_012101154v1 I 1 C 0 s calJac3.chr14 14811524 72 + 108792865 TTATTTTGTTTTACATCCCATTCAGGCTGCAATTGACAAGAAAGATTCTGTTTCGAATATAGCCACAGAAAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254300 72 - 28799539 TTATTTTGTTTCTCATTCCATTCAGGCTATAATTAAAAAGAAAGTTTCTATTTCAAATATTGCCACAGGAAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 10886 72 - 3620821 TTATTGTGCTTCAAATCCCATTCAGGCTACAAGTGACAAGAAAGATTCTGTTTCGAATATAGCCACAGAAAT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19649342 69 - 27850971 ---TTTTGTTTCAAAACCCGTTTAGCCTACCACTGAAATGAAAGATTGTGTTCCGAATAAAGCAGTAGGAGT i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104232772 1973 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I a score=12005.000000 s hg38.chrUn_KI270746v1 26550 6 + 66486 aaagga s panPan2.chr2A 89821308 6 + 114371477 AAAGGA i panPan2.chr2A C 0 C 0 s rheMac8.chr13 108492702 6 + 108979918 AAAGGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17650257 6 + 111193037 AAAGGA i macFas5.chr13 C 0 C 0 s manLeu1.NW_012101154v1 304428 6 - 409142 AAAGGA i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27254372 6 - 28799539 AACGGT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 10958 6 - 3620821 AAAGGA i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19649411 6 - 27850971 GAAGGA i otoGar3.GL873538 C 0 T 1996 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104232772 1973 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e calJac3.chr14 14811596 0 + 108792865 C e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=4011.000000 s hg38.chrUn_KI270746v1 26556 2 + 66486 tg s panPan2.chr2A 89821314 2 + 114371477 TG i panPan2.chr2A C 0 I 19 s rheMac8.chr13 108492708 2 + 108979918 TG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17650263 2 + 111193037 TG i macFas5.chr13 C 0 C 0 s manLeu1.NW_012101154v1 304434 2 - 409142 TG i manLeu1.NW_012101154v1 C 0 I 10 s saiBol1.JH378124 27254378 2 - 28799539 TG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 10964 2 - 3620821 TG i cebCap1.NW_016107537v1 C 0 I 65636 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104232772 1973 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e calJac3.chr14 14811596 0 + 108792865 C e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=207.000000 s hg38.chrUn_KI270746v1 26558 1 + 66486 c s rheMac8.chr13 108492710 1 + 108979918 C i rheMac8.chr13 C 0 I 23841 s macFas5.chr13 17650265 1 + 111193037 C i macFas5.chr13 C 0 I 1845 s saiBol1.JH378124 27254380 1 - 28799539 T i saiBol1.JH378124 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104232772 1973 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e panPan2.chr2A 89821316 19 + 114371477 I e calJac3.chr14 14811596 0 + 108792865 C e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=36.000000 s hg38.chrUn_KI270746v1 26559 5 + 66486 tttaa s saiBol1.JH378124 27254381 5 - 28799539 TGAAA i saiBol1.JH378124 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104232772 1973 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=0.000000 s hg38.chrUn_KI270746v1 26564 169 + 66486 agttcatatggaaccaaaaaagagcccgcatcaccaagtcaatcctaagccaaaagaacaaagcaacaggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaac e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104232772 1973 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=1770.000000 s hg38.chrUn_KI270746v1 26733 20 + 66486 agagccctcagaaataacac s papAnu3.chrUn_NW_003899513v1 90560 20 + 121002 agagctctcagaaataacac i papAnu3.chrUn_NW_003899513v1 n 1973 I 374 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=0.000000 s hg38.chrUn_KI270746v1 26753 374 + 66486 tgcatatctacaactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatggagaaagctgaaactggatcctttccttacaccttattcaaaaataaattcaagatggattaaagacttaaacattagacctaaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggcatggccaaggacttcatgtctaaaacaccaaaagccatggcaacaaaagacaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaagagaaactaccatcagagtgaacaggcaacct e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 90580 374 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=1387.000000 s hg38.chrUn_KI270746v1 27127 17 + 66486 acaaaatgggagaaaat s papAnu3.chrUn_NW_003899513v1 90954 17 + 121002 ccaaaatgggagaaaat i papAnu3.chrUn_NW_003899513v1 I 374 I 49 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=0.000000 s hg38.chrUn_KI270746v1 27144 48 + 66486 tttcgcaacctacttattgacaaagagctaatatccagaatctacaat e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 90971 49 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=100.000000 s hg38.chrUn_KI270746v1 27192 1 + 66486 g s papAnu3.chrUn_NW_003899513v1 91020 1 + 121002 g i papAnu3.chrUn_NW_003899513v1 I 49 I 963 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=0.000000 s hg38.chrUn_KI270746v1 27193 726 + 66486 aactgaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaacacacatgaaaaaatgttcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagatatcatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggagaagatgtggagaaataggaacatttttacactgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcgattcctcagggatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaaggactataaatcatgctgctataaagacacatgcacacttatgtttattgcggcactattcacaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactggattaagaaaatgtagcacatatacaccatggaatactatgcagccttaaaaaatgatgagttcatgtcctttgtagggacatggatgaaattggaagtcatcattctcagtaaactatcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaattgaacaatgagatcacatggacacaggaaggggaacatcacactctggggactgtggtggggtggga e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91021 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=-31.000000 s hg38.chrUn_KI270746v1 27919 1 + 66486 g s rhiRox1.KN297771v1 2247065 1 + 2406605 a i rhiRox1.KN297771v1 N 0 I 101 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91021 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=100.000000 s hg38.chrUn_KI270746v1 27920 1 + 66486 g s nasLar1.chr5 16513338 1 + 174288623 g i nasLar1.chr5 N 0 I 98 e rhiRox1.KN297771v1 2247066 101 + 2406605 I e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91021 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=0.000000 s hg38.chrUn_KI270746v1 27921 123 + 66486 aggggggagggacagctttgggagatatacctattgctagatgatgagttagtgggtgcagcgcaccagcatggcacatgtatacatatgtaactaacctgcacaatgtgcacatgtacccta e nasLar1.chr5 16513339 98 + 174288623 I e rhiRox1.KN297771v1 2247066 101 + 2406605 I e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91021 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=-23.000000 s hg38.chrUn_KI270746v1 28044 2 + 66486 aa s nasLar1.chr5 16513437 2 + 174288623 ac i nasLar1.chr5 I 98 C 0 e rhiRox1.KN297771v1 2247066 101 + 2406605 I e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91021 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=575.000000 s hg38.chrUn_KI270746v1 28046 3 + 66486 act s nasLar1.chr5 16513439 3 + 174288623 att i nasLar1.chr5 C 0 N 0 s rhiRox1.KN297771v1 2247167 3 + 2406605 att i rhiRox1.KN297771v1 I 101 N 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91021 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=0.000000 s hg38.chrUn_KI270746v1 28049 95 + 66486 ttaataataaaagaaagaaaaAGAAAAAAAATTAAATATGGTACTGAAGCAAATAAACCACTAATAGCTGAGAAAAACAAGTAAATAAAAATAAA e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91021 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=333.000000 s hg38.chrUn_KI270746v1 28144 5 + 66486 TTGTT s papAnu3.chrUn_NW_003899513v1 91984 5 + 121002 TTATT i papAnu3.chrUn_NW_003899513v1 I 963 n 963 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=0.000000 s hg38.chrUn_KI270746v1 28149 6 + 66486 GATGTA e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91989 963 + 121002 n e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e macFas5.chr13 17650266 1845 + 111193037 I e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=210.000000 s hg38.chrUn_KI270746v1 28155 6 + 66486 AAAAAA s macFas5.chr13 17652111 6 + 111193037 AGAAAT i macFas5.chr13 I 1845 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91989 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e chlSab2.chr14 16493159 0 + 107702431 C e cerAty1.NW_012001187v1 5004450 0 - 5626091 C e macNem1.NW_012014799v1 10501595 0 - 11597128 C e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C e calJac3.chr14 14811596 0 + 108792865 C e nomLeu3.chr14 73223408 0 + 94967081 C e gorGor5.CYUI01015730v1 830574 0 - 998796 C a score=25582.000000 s hg38.chrUn_KI270746v1 28161 14 + 66486 AAAGGATGCACTAC s gorGor5.CYUI01015730v1 830574 14 - 998796 AAAGGATGGACAAC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223408 14 + 94967081 GAAGGAGGAACCAA i nomLeu3.chr14 C 0 C 0 s macFas5.chr13 17652117 14 + 111193037 AAAGGATGGACAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501595 14 - 11597128 AAAGGATGAACAAC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5004450 14 - 5626091 AAAGGATGAACAAC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493159 14 + 107702431 AAAGGATGGACAAC i chlSab2.chr14 C 0 C 0 s calJac3.chr14 14811596 14 + 108792865 AAAGGATGGACAAA i calJac3.chr14 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91989 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I e saiBol1.JH378124 27254386 0 - 28799539 C a score=9010.000000 s hg38.chrUn_KI270746v1 28175 4 + 66486 AATG s gorGor5.CYUI01015730v1 830588 4 - 998796 AATC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223422 4 + 94967081 TATT i nomLeu3.chr14 C 0 C 0 s macFas5.chr13 17652131 4 + 111193037 AATC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501609 4 - 11597128 AATC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5004464 4 - 5626091 AATC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493173 4 + 107702431 AATC i chlSab2.chr14 C 0 C 0 s calJac3.chr14 14811610 4 + 108792865 AATC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254386 4 - 28799539 AATC i saiBol1.JH378124 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91989 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e manLeu1.NW_012101154v1 304436 10 - 409142 I e rheMac8.chr13 108492711 23841 + 108979918 I e panPan2.chr2A 89821316 19 + 114371477 I a score=35388.000000 s hg38.chrUn_KI270746v1 28179 9 + 66486 TGGGACAGG s gorGor5.CYUI01015730v1 830592 7 - 998796 TGGGACA-- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223426 9 + 94967081 TGGGACGGG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108516552 9 + 108979918 TGGGACAGG i rheMac8.chr13 I 23841 C 0 s macFas5.chr13 17652135 9 + 111193037 TGGGACAGG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501613 9 - 11597128 TGGGACAGG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5004468 9 - 5626091 TGGGACAGG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493177 9 + 107702431 TGGGACAGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 304446 9 - 409142 TGGGGCAGG i manLeu1.NW_012101154v1 I 10 C 0 s calJac3.chr14 14811614 9 + 108792865 TGAGACAGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254390 9 - 28799539 TGGAGCAGG i saiBol1.JH378124 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91989 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e panPan2.chr2A 89821316 19 + 114371477 I a score=40667.000000 s hg38.chrUn_KI270746v1 28188 8 + 66486 TAATTTTG s panPan2.chr2A 89821335 8 + 114371477 TAATTTTG i panPan2.chr2A I 19 C 0 s gorGor5.CYUI01015730v1 830599 8 - 998796 TAATTTTG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223435 8 + 94967081 TAATTTTG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108516561 8 + 108979918 TAATTTTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17652144 8 + 111193037 TAATTCTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501622 8 - 11597128 TAATTTTG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5004477 8 - 5626091 TAATATTG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493186 8 + 107702431 TAATTCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 304455 8 - 409142 TAATTCTG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811623 8 + 108792865 TAATTTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254399 8 - 28799539 TAATTTAG i saiBol1.JH378124 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chrUn_NW_003899513v1 91989 963 + 121002 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I a score=7800.000000 s hg38.chrUn_KI270746v1 28196 1 + 66486 C s panPan2.chr2A 89821343 1 + 114371477 C i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830607 1 - 998796 C i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223443 1 + 94967081 C i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108516569 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17652152 1 + 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501630 1 - 11597128 C i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5004485 1 - 5626091 C i cerAty1.NW_012001187v1 C 0 C 0 s papAnu3.chr13 104234745 1 + 128036923 C i papAnu3.chr13 I 1973 I 2069 s chlSab2.chr14 16493194 1 + 107702431 C i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 304463 1 - 409142 C i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811631 1 + 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254407 1 - 28799539 C i saiBol1.JH378124 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I a score=134676.000000 s hg38.chrUn_KI270746v1 28197 27 + 66486 AAAACACATTTAATGTCATTTTCAATC s panPan2.chr2A 89821344 27 + 114371477 AAAGCACATTTAATGTCATGTTCAGCC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830608 27 - 998796 AAAGCACATTTAATGTCATGTTCAGCC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223444 27 + 94967081 AAAACACATCTAATGTCATGTTCAATC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108516570 27 + 108979918 AAAACACATTTAATGTCATGTTCAGTC i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17652153 27 + 111193037 AAAACACATTTAATGTCATGTTCAGTC i macFas5.chr13 C 0 I 1853 s macNem1.NW_012014799v1 10501631 27 - 11597128 AAAACACATTTAACGTCATGTTCAGTC i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 5004486 27 - 5626091 AAAACATATTTAATGTCATGTTCAATC i cerAty1.NW_012001187v1 C 0 I 3723 s chlSab2.chr14 16493195 27 + 107702431 AAAACACATTTAATGTCATGTTCAGTA i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 304464 27 - 409142 AAAACACATTTAATGTCATGTTCAGTC i manLeu1.NW_012101154v1 C 0 I 1 s calJac3.chr14 14811632 27 + 108792865 AATACACATTTAATGTCATGTTTACTC i calJac3.chr14 C 0 I 1 s saiBol1.JH378124 27254408 27 - 28799539 AATACATATTTAATGTCATCTGCACTC i saiBol1.JH378124 C 0 I 1 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104234746 2069 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I a score=4372.000000 s hg38.chrUn_KI270746v1 28224 3 + 66486 ATT- s panPan2.chr2A 89821371 4 + 114371477 AAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830635 4 - 998796 AAGA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223471 4 + 94967081 AAGA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108516598 3 + 108979918 -AGA i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17654033 3 + 111193037 -ACA i macFas5.chr13 I 1853 C 0 s macNem1.NW_012014799v1 10501659 3 - 11597128 -AGA i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 5008236 3 - 5626091 -AGA i cerAty1.NW_012001187v1 I 3723 C 0 s chlSab2.chr14 16493223 3 + 107702431 -AGG i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 304492 3 - 409142 -AGA i manLeu1.NW_012101154v1 I 1 C 0 s calJac3.chr14 14811660 3 + 108792865 -AGA i calJac3.chr14 I 1 C 0 s saiBol1.JH378124 27254436 3 - 28799539 -AGA i saiBol1.JH378124 I 1 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104234746 2069 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e otoGar3.GL873538 19649417 1996 - 27850971 T e cebCap1.NW_016107537v1 10966 65636 - 3620821 I a score=40746.000000 s hg38.chrUn_KI270746v1 28227 8 + 66486 TAGAAAAT s panPan2.chr2A 89821375 8 + 114371477 TAGAAAAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830639 8 - 998796 TAGAAAAG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223475 8 + 94967081 TAGAAGAG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108516601 8 + 108979918 TAGAAAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17654036 8 + 111193037 TAGAAAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501662 8 - 11597128 CAGAAAAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5008239 8 - 5626091 TAGAAAAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493226 8 + 107702431 TAGAAAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 304495 8 - 409142 TAGAAAAT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811663 8 + 108792865 TAGAAGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254439 8 - 28799539 TAGAAGAG i saiBol1.JH378124 C 0 C 0 s otoGar3.GL873538 19647421 8 - 27850971 TAGACcag i otoGar3.GL873538 T 1996 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104234746 2069 + 128036923 I e tarSyr2.KE950423v1 999071 4588 + 1054607 I e cebCap1.NW_016107537v1 10966 65636 - 3620821 I a score=132377.000000 s hg38.chrUn_KI270746v1 28235 27 + 66486 AACTTCT-CTTCCCCGAATAaatcagcg s panPan2.chr2A 89821383 27 + 114371477 AACTTCT-CTTCCCCGAATAaatcagcg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830647 27 - 998796 AACTTCT-CTTCCCCGAataaatcagcg i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223483 27 + 94967081 AACTTCC-CTTCCCcaaataaatcagtg i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108516609 27 + 108979918 AACTTCT-CTTCCCTGAATAaatcagcg i rheMac8.chr13 C 0 I 1855 s macFas5.chr13 17654044 27 + 111193037 AACTTCT-CTTCCCTGAGTAaatcatcg i macFas5.chr13 C 0 I 1844 s macNem1.NW_012014799v1 10501670 27 - 11597128 AACTTCT-CTTCCCcaaataaatcagcg i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5008247 27 - 5626091 AACTTCT-CTTCCCTGAATAaatcagcg i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493234 27 + 107702431 AACGTGT-CTTCCCcaaataaatcagca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 304503 27 - 409142 AACTTCT-CTTCCCTGAATAaatcagca i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811671 28 + 108792865 AATGACTTTTCCTCCAAATAAATCAGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254447 22 - 28799539 AA------CTTCCCTGAATAaatcagca i saiBol1.JH378124 C 0 C 0 s tarSyr2.KE939726v1 20917 27 - 73003 agtttct-caaacttgaataaatcagat i tarSyr2.KE939726v1 n 4588 C 0 s otoGar3.GL873538 19647429 27 - 27850971 agcttct-caaatgttaaggtatcagct i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104234746 2069 + 128036923 I e cebCap1.NW_016107537v1 10966 65636 - 3620821 I a score=5428.000000 s hg38.chrUn_KI270746v1 28262 3 + 66486 ggg s panPan2.chr2A 89821410 3 + 114371477 ggg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830674 3 - 998796 ggg i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223510 3 + 94967081 ggg i nomLeu3.chr14 C 0 C 0 s macNem1.NW_012014799v1 10501697 3 - 11597128 agg i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5008274 3 - 5626091 agg i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493261 1 + 107702431 --g i chlSab2.chr14 C 0 I 2 s manLeu1.NW_012101154v1 304530 1 - 409142 --t i manLeu1.NW_012101154v1 C 0 I 2 s calJac3.chr14 14811699 1 + 108792865 --G i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254469 1 - 28799539 --g i saiBol1.JH378124 C 0 C 0 s tarSyr2.KE939726v1 20944 3 - 73003 gag i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647456 3 - 27850971 ggg i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104234746 2069 + 128036923 I e cebCap1.NW_016107537v1 10966 65636 - 3620821 I e rheMac8.chr13 108516636 1855 + 108979918 I e macFas5.chr13 17654071 1844 + 111193037 I a score=36035.000000 s hg38.chrUn_KI270746v1 28265 16 + 66486 cggagctcgtcgaagc s panPan2.chr2A 89821413 13 + 114371477 --ga-ctctttgaagc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830677 13 - 998796 --gt-ctcgttgaagc i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223513 13 + 94967081 --ag-ttcgtctaagc i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108518491 13 + 108979918 --gg-ctcgtcgaagc i rheMac8.chr13 I 1855 C 0 s macFas5.chr13 17655915 13 + 111193037 --gg-ctcgtcaaagc i macFas5.chr13 I 1844 C 0 s macNem1.NW_012014799v1 10501700 13 - 11597128 --ga-ctcgttgatgc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5008277 13 - 5626091 --ga-ctcgttgatgc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493264 13 + 107702431 --ga-cttgtccaagc i chlSab2.chr14 I 2 C 0 s manLeu1.NW_012101154v1 304533 13 - 409142 --gg-ctagtcgaagc i manLeu1.NW_012101154v1 I 2 C 0 s calJac3.chr14 14811700 15 + 108792865 GGGG-CTTATTGAAGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254470 15 - 28799539 gggg-ctctttgaaaa i saiBol1.JH378124 C 0 C 0 s tarSyr2.KE939726v1 20947 14 - 73003 -gag-tttgtttaaaa i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647459 14 - 27850971 -gac-cttgttaaaaa i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104234746 2069 + 128036923 I e cebCap1.NW_016107537v1 10966 65636 - 3620821 I a score=833872.000000 s hg38.chrUn_KI270746v1 28281 137 + 66486 tgcactttctgattcagcagacctgagattcttcatttgtaataaattctcgggtgatgctgatgctgctgat-cTGGA-----ACATGATCTTCGCAGTAATAT-----TATACACTTCCCCACATTGAAATTGGGAAGAAGAAACA s panPan2.chr2A 89821426 137 + 114371477 tgcacattctgattcagtaggcctgagattcttcatttgtagtaagttctcaggtgacactgatgctgctggt-cTTCG-----ACATGAACTTTGCAGTAAGAT-----TATAGACTTCCACACATTGAAATTGGGAAGAAGAAAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830690 137 - 998796 tgcacattctgattcagcaggcctgagattcttcatttgtagtaagttctcaggtgacactgatgctgctggt-cTTTG-----ACATGAACTTTGCAGTAAGAT-----TATAGACTTCCACACATTGAAATTGGGAAGAAGAAAGG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223526 138 + 94967081 tgcatgttctgattcagtacgcctgagattcttcatttgtagtgagttctcaggtgaccctgatgctgctggtccttgg-----ccatgatctgagtagtaagAT-----TATAGACTTCCCCACATTGAAATTGGGAAGAAGAACCA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108518504 137 + 108979918 tgcacattctgattcagcagacctgagattcttcatatttaataagttctctggtgacgccaatgctgctggt-cttgg-----acATGACCTTCCCGGTAAGAT-----TATAGACTTCCACACATTGAAATTGGGAAGAAGAAACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17655928 137 + 111193037 tgcacattctgattcagcaggcctgaaattcttcaaatgttgtaagttctctggtgacgccgatgctgctggt-cTTGG-----ATATGATCTTTGCAGTAAGAT-----TATAGACTTCCACACACTGAAATTGGGAAGAAGAAACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501713 137 - 11597128 tgcacattctgattcagcaggcctgagattcttcatttgtagtaagttctcgggtgatgctgatgctgctggt-cttgg-----acATGATCTTCGCAGTAAGAT-----TATAAACTTTCTCACATTGAAACTGGGAAGAAGAAACA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5008290 137 - 5626091 tgcacattctgattcagcaggcctgaaattcttcatatgtaataagttctcgggtgacgcccatgctgctggt-cttgg-----acATGATCTTCGCAGTAAGAT-----TATAGACTTCCACACATTGAAATTGGGAAGAAGAAACA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493277 137 + 107702431 tgcatattctgattcagcaggcctgagattcttcatatgtaataagttcttgggtgacaccgatgctgttggt-cttgg-----acATGATCTTCGCAATAAGAT-----TATAGACTTCCACACATTGAAACTGGGAAGAAGAAACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 304546 137 - 409142 tacacattctgattcagcaggcctgactttcttcatatgtaataagttctctggtgacgcccatgctgctggt-ctcga-----acATGATCTTCGCAGTAAGAT-----TATAGACTTCCACACATTGAAATTGGGAAGAAGAAACA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811715 124 + 108792865 TGTACATTCTGATTCAGCAGGCCTGAGA------------------TTTTTGGGAGCTGTTGGTGCTGCTGTTCCTTGG-----CCATGATCTAAATAGTAAGATGTAAGTA-AGACTTTTCTACATTGTAATTGGAAAGAAGAACCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254485 138 - 28799539 tgcacattgtgattcagcaggcctgagattctgcatttctagtacgttctcaggtgatgctgatgttgctggtccttgg-----ccatgatctgaatagccaggT-----TATAGACTTCTGTACGTTGAAATTGGGAAGAAGAACCA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76602 138 - 3620821 tgcacattctgattcagcaggcctgagattctgcatttctagtacattctcaggtgatgctaatgctgctggtccttgg-----ccgtgatctgaatagccaggT-----TATAGACTTCTGTACATTGAAATTGGGAAGAAGAACCA i cebCap1.NW_016107537v1 I 65636 C 0 s tarSyr2.KE939726v1 20961 142 - 73003 tgcacattctgatccagcaggcctgggattctgcatttct-gtaagttctctggtgatgctgttgctactggtcctcagtccacatatgctctgagtagtaaACA-----CATCACCTTTTCTTTAAAGAGGTCTAGAAGAAGAGCCA i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647473 130 - 27850971 tacacattgtgattcagcaggcatgggatgctgtatatctagtatgtttttaggtgatgctgatgatattggtccttgg-----ac----catcctgagtagGAT---------GACTTCTGTATGGAGACATCTGGAAGAATCACCA i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104234746 2069 + 128036923 I a score=9090.000000 s hg38.chrUn_KI270746v1 28418 1 + 66486 T s panPan2.chr2A 89821563 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830827 1 - 998796 T i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223664 1 + 94967081 T i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108518641 1 + 108979918 T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17656065 1 + 111193037 T i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501850 1 - 11597128 T i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5008427 1 - 5626091 T i cerAty1.NW_012001187v1 C 0 C 0 s papAnu3.chr13 104236815 1 + 128036923 T i papAnu3.chr13 I 2069 I 29378 s chlSab2.chr14 16493414 1 + 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 304683 1 - 409142 T i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811839 1 + 108792865 T i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254623 1 - 28799539 C i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76740 1 - 3620821 T i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21103 1 - 73003 T i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647603 1 - 27850971 T i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I a score=147596.000000 s hg38.chrUn_KI270746v1 28419 31 + 66486 TGGAGAGCAGATCAAGACATAAGGGGATCAG s panPan2.chr2A 89821564 30 + 114371477 TGGAGAGCCATTAAAGACATAAGGAG-TCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830828 30 - 998796 TGGAGAGCCATTAAAGACATAAGGAG-TCAG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223665 31 + 94967081 TGCAGAGCAGTTCAACACATACCAGGCTAAG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108518642 31 + 108979918 TGGAGAGCAGATCAAGACGTAAGGGGCTCAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17656066 31 + 111193037 TGGAGAGCAGATCAAGACGTAAAGGGCTCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501851 31 - 11597128 TGGAGAGCAGGTCAAGACATAAGGGGCTCAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5008428 31 - 5626091 TGGAGAGCAGATCAAGACATAAGGGGTTCAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493415 31 + 107702431 TGGAGAGCAGGGCAAGACATAAGGGACTCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 304684 31 - 409142 TGGAGAGCAGATCAAGATGTAAGGGGCTCAG i manLeu1.NW_012101154v1 C 0 I 1846 s calJac3.chr14 14811840 15 + 108792865 TAGAGAGC---TCAG-------------CAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254624 31 - 28799539 TGGAAAGCAGTTCAAGACATAAGAGGATCAG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76741 31 - 3620821 TGGAAAGCAGTTCAAGACATAAGAGGATCAG i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21104 31 - 73003 TGGATCACAGTTCAAAACATAGCAGGGTCAT i tarSyr2.KE939726v1 C 0 I 1 s otoGar3.GL873538 19647604 30 - 27850971 TGGATAACAGTTCAA-ACATAGCAGGACCAA i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I a score=450395.000000 s hg38.chrUn_KI270746v1 28450 70 + 66486 GGGACAGCATAATTTTGCTTTAATTCTACAGC-ATGTTTTCACCAAGGGTGGAAGGAG-AATGAGTTGAAGT- s panPan2.chr2A 89821594 70 + 114371477 GGGACAGCATAATTTTGCTTTAATTCTACAGC-ATGTTTTCACCAAGGGTGGAAGGAG-AAAGAGATGAAGT- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 830858 70 - 998796 GGGACAGCATAATTTTGCTTTAATTCTACAGC-ATGTTTTCACCAAGGGTGGAAGGAG-AAAGAGATGAAGT- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223696 70 + 94967081 GGAAAAGCATAATTTTGCTTTAATTTTACAGC-ATGTTTCCATCAAGAGGGGAAAGAG-AATGAGATGAAGT- i nomLeu3.chr14 C 0 I 1 s rheMac8.chr13 108518673 70 + 108979918 GGGACAGCATAATTTTGCTTTAATTCTACAGC-TTGTTTTCACCAAGGGTGGAAGGAG-AAAGAGATGAAGT- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17656097 70 + 111193037 GGGACAGCATAATTTTGCTTTAATTCTACAGC-ATGTTTTCACCAAGGGTGGAAGGAG-AAAGAGATGAAGT- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501882 70 - 11597128 GGGACAGCATAATTTTGCTTTAATTCTGCAGC-ATATTTTCACCAAGGGTGGAAAGAG-AAAGAGATGAAGT- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5008459 70 - 5626091 GGGACTGCATAATTTTGCTTTAATTCTGCAGT-ATGTTTTCACCAAGGGTGGAAGGAG-AAAGAGATGAAGT- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493446 70 + 107702431 GGGACAGCATAATTTTGCTGTAATTCTGCAGC-ATATTTTCACCAAGGGTGGAAGGAG-AAAGAAATGAAGT- i chlSab2.chr14 C 0 I 1692 s manLeu1.NW_012101154v1 306561 70 - 409142 GGGACAGCATAATTTTGCTTTAATTCTACAGC-ATGTTTTCACCAAGGGTGGAAAGAG-AAAGAGATGAAGT- i manLeu1.NW_012101154v1 I 1846 C 0 s calJac3.chr14 14811855 66 + 108792865 GAG----CATAA-TTTGCTTTACATCTACAGCTATGTTTTCATAAACAGGGAAAGGAG-AAAGAGATGAAGT- i calJac3.chr14 C 0 I 1 s saiBol1.JH378124 27254655 70 - 28799539 GGGACATCATAATTTTGCTCTTATTTCATAGC-ATGTTCCTATGGAGAGGGGAAGGAG-AAAGAGACAAAGT- i saiBol1.JH378124 C 0 I 1 s cebCap1.NW_016107537v1 76772 70 - 3620821 GGGAAAGCATAATTTTGCTCTTATTTCATAGC-ATGTTTCTATGGAGAGGGGAAGGAG-AAAGAGACGAAGT- i cebCap1.NW_016107537v1 C 0 I 1 s tarSyr2.KE939726v1 21136 71 - 73003 AGAATGCCTTATTTCTGCCTTTATTCCTGAGT-ATGATTCTGGGCAGAGGAAAAGGAGCAAAGAGTTGAAAA- i tarSyr2.KE939726v1 I 1 I 4 s otoGar3.GL873538 19647634 72 - 27850971 GGGAAAGCATTATTTTGCTTTTATTTCTGAGC-ATGTTTCTAGCCAGAGTAGAAGGAGCAAAGAGATGAAGAA i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I a score=224138.000000 s hg38.chrUn_KI270746v1 28520 41 + 66486 ATAGATTTTACAGACGTCACATCGTATTGCTAAAAACAGAC s panPan2.chr2A 89821664 41 + 114371477 ATAGATTTTACAGACGTCACATCGTATTGCTAAAAACAGAT i panPan2.chr2A C 0 I 1925 s gorGor5.CYUI01015730v1 830928 41 - 998796 ATAGATTTTACAGACGTCACATCGTATTGCTAAAAACAGAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223767 41 + 94967081 ATAGAAATTGTAGGCATCATATTGTATTGTTATAAACAGAG i nomLeu3.chr14 I 1 C 0 s rheMac8.chr13 108518743 41 + 108979918 ATAGATTTTGTAGACATCACACCGTACTGCTAAAGACAGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17656167 41 + 111193037 ATAGATTTTACAGACATCACACCGTACTGCTAAAGACAGAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501952 41 - 11597128 ATAGATTTTACATAAGTCACATCGTACTGCTAAAAACAGAC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5008529 41 - 5626091 ATAGATTTTGTAGACATCACATCGTACTCCTAAAGACAGAC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16495208 41 + 107702431 ATAGATTTTACAGACGTCACATCGTACTGCTAAAAACAGAT i chlSab2.chr14 I 1692 C 0 s manLeu1.NW_012101154v1 306631 41 - 409142 ATAGATTTTGTAGACATCACACTGTACTGCTAAAGACAGAC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811922 41 + 108792865 AAAGAAATTGTAGGTGCCACATCGTATTGCTAGAACCAGAC i calJac3.chr14 I 1 C 0 s saiBol1.JH378124 27254726 41 - 28799539 ATAGAAATTATAGATGTCTGATGGTACTGCTAAAACCAGAG i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 76843 41 - 3620821 ATAGAAATTATAGATGTCTGATGGTACTGCTAAAACCAGAG i cebCap1.NW_016107537v1 I 1 C 0 s tarSyr2.KE939726v1 21211 39 - 73003 --GGAAATTGTACATGTAGGACACCACTGCTCAATAAAGAG i tarSyr2.KE939726v1 I 4 C 0 s otoGar3.GL873538 19647706 41 - 27850971 ATCAAAATTATAGATATAAGATATTATTGCTAAATAAAGAG i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I a score=22470.000000 s hg38.chrUn_KI270746v1 28561 6 + 66486 GGAAAA- s gorGor5.CYUI01015730v1 830969 6 - 998796 GGAAAA- i gorGor5.CYUI01015730v1 C 0 I 1898 s nomLeu3.chr14 73223808 6 + 94967081 GGAAAA- i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108518784 6 + 108979918 GGAAAC- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17656208 6 + 111193037 GGAAAC- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10501993 6 - 11597128 AGAAAA- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5008570 6 - 5626091 GGAAAC- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16495249 6 + 107702431 GGAAAA- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 306672 6 - 409142 GGAAAC- i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811963 6 + 108792865 AGAAGA- i calJac3.chr14 C 0 I 1 s saiBol1.JH378124 27254767 6 - 28799539 GGAAGA- i saiBol1.JH378124 C 0 I 1 s cebCap1.NW_016107537v1 76884 6 - 3620821 GGAAGA- i cebCap1.NW_016107537v1 C 0 I 1 s tarSyr2.KE939726v1 21250 5 - 73003 -GAAAT- i tarSyr2.KE939726v1 C 0 I 2 s otoGar3.GL873538 19647747 6 - 27850971 -GACAGG i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e panPan2.chr2A 89821705 1925 + 114371477 I a score=36040.000000 s hg38.chrUn_KI270746v1 28567 13 + 66486 -GTTATTGTAATAA s nomLeu3.chr14 73223814 13 + 94967081 -GTGATCCTAATTA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108518790 13 + 108979918 -TGGATCGTAATAA i rheMac8.chr13 C 0 I 3696 s macFas5.chr13 17656214 13 + 111193037 -TTGATCGTAATAA i macFas5.chr13 C 0 I 1855 s macNem1.NW_012014799v1 10501999 13 - 11597128 -GTGAACGTAATAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5008576 13 - 5626091 -TTGATCGTAATAA i cerAty1.NW_012001187v1 C 0 I 1836 s chlSab2.chr14 16495255 13 + 107702431 -GTGATTGTAATAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 306678 13 - 409142 -TGGATCGTAATAA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14811970 13 + 108792865 -GTGATCGTAATGA i calJac3.chr14 I 1 C 0 s saiBol1.JH378124 27254774 13 - 28799539 -GTTGTCATAATAA i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 76891 13 - 3620821 -GTTGTCATAATAA i cebCap1.NW_016107537v1 I 1 C 0 s tarSyr2.KE939726v1 21257 13 - 73003 -GTGGTGAGAATAA i tarSyr2.KE939726v1 I 2 C 0 s otoGar3.GL873538 19647753 10 - 27850971 GTTGGTGGGA---- i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e panPan2.chr2A 89821705 1925 + 114371477 I e gorGor5.CYUI01015730v1 830975 1898 - 998796 I a score=2585.000000 s hg38.chrUn_KI270746v1 28580 1 + 66486 C s nomLeu3.chr14 73223827 1 + 94967081 C i nomLeu3.chr14 C 0 I 2 s rheMac8.chr13 108522499 1 + 108979918 C i rheMac8.chr13 I 3696 C 0 s macFas5.chr13 17658082 1 + 111193037 C i macFas5.chr13 I 1855 C 0 s macNem1.NW_012014799v1 10502012 1 - 11597128 C i macNem1.NW_012014799v1 C 0 I 6195 s cerAty1.NW_012001187v1 5010425 1 - 5626091 C i cerAty1.NW_012001187v1 I 1836 C 0 s chlSab2.chr14 16495268 1 + 107702431 A i chlSab2.chr14 C 0 I 3 s manLeu1.NW_012101154v1 306691 1 - 409142 C i manLeu1.NW_012101154v1 C 0 I 3 s calJac3.chr14 14811983 1 + 108792865 C i calJac3.chr14 C 0 I 3 s saiBol1.JH378124 27254787 1 - 28799539 C i saiBol1.JH378124 C 0 I 3 s cebCap1.NW_016107537v1 76904 1 - 3620821 T i cebCap1.NW_016107537v1 C 0 I 3 s tarSyr2.KE939726v1 21270 1 - 73003 T i tarSyr2.KE939726v1 C 0 I 3 s otoGar3.GL873538 19647763 1 - 27850971 C i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e panPan2.chr2A 89821705 1925 + 114371477 I e gorGor5.CYUI01015730v1 830975 1898 - 998796 I a score=-9110.000000 s hg38.chrUn_KI270746v1 28581 4 + 66486 ---CAGT s nomLeu3.chr14 73223830 4 + 94967081 ---CATA i nomLeu3.chr14 I 2 C 0 s rheMac8.chr13 108522500 1 + 108979918 ---C--- i rheMac8.chr13 C 0 I 3 s macFas5.chr13 17658083 1 + 111193037 ---C--- i macFas5.chr13 C 0 I 3 s cerAty1.NW_012001187v1 5010426 1 - 5626091 ---C--- i cerAty1.NW_012001187v1 C 0 I 3 s chlSab2.chr14 16495272 1 + 107702431 ---T--- i chlSab2.chr14 I 3 I 1 s manLeu1.NW_012101154v1 306695 1 - 409142 ---T--- i manLeu1.NW_012101154v1 I 3 I 1852 s calJac3.chr14 14811987 1 + 108792865 ---T--- i calJac3.chr14 I 3 I 1 s saiBol1.JH378124 27254791 1 - 28799539 ---T--- i saiBol1.JH378124 I 3 I 1 s cebCap1.NW_016107537v1 76908 1 - 3620821 ---T--- i cebCap1.NW_016107537v1 I 3 I 1 s tarSyr2.KE939726v1 21274 1 - 73003 ---T--- i tarSyr2.KE939726v1 I 3 I 3 s otoGar3.GL873538 19647764 4 - 27850971 CAAT--- i otoGar3.GL873538 C 0 I 7 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e macNem1.NW_012014799v1 10502013 6195 - 11597128 I e panPan2.chr2A 89821705 1925 + 114371477 I e gorGor5.CYUI01015730v1 830975 1898 - 998796 I a score=-2783.000000 s hg38.chrUn_KI270746v1 28585 3 + 66486 AAA- s nomLeu3.chr14 73223834 3 + 94967081 AAT- i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108522504 2 + 108979918 AA-- i rheMac8.chr13 I 3 I 1 s macFas5.chr13 17658087 2 + 111193037 AA-- i macFas5.chr13 I 3 I 1 s cerAty1.NW_012001187v1 5010430 2 - 5626091 AA-- i cerAty1.NW_012001187v1 I 3 I 1 s chlSab2.chr14 16495274 2 + 107702431 GA-- i chlSab2.chr14 I 1 I 1 s manLeu1.NW_012101154v1 308548 2 - 409142 AA-- i manLeu1.NW_012101154v1 I 1852 I 1854 s calJac3.chr14 14811989 2 + 108792865 AA-- i calJac3.chr14 I 1 I 1 s saiBol1.JH378124 27254793 2 - 28799539 AA-- i saiBol1.JH378124 I 1 I 1 s cebCap1.NW_016107537v1 76910 2 - 3620821 AA-- i cebCap1.NW_016107537v1 I 1 I 1 s tarSyr2.KE939726v1 21278 2 - 73003 AA-- i tarSyr2.KE939726v1 I 3 I 1 s otoGar3.GL873538 19647775 3 - 27850971 AA-G i otoGar3.GL873538 I 7 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e macNem1.NW_012014799v1 10502013 6195 - 11597128 I e panPan2.chr2A 89821705 1925 + 114371477 I e gorGor5.CYUI01015730v1 830975 1898 - 998796 I a score=79923.000000 s hg38.chrUn_KI270746v1 28588 21 + 66486 ATTGTGGAAGGAGAACCAATG s nomLeu3.chr14 73223837 21 + 94967081 ACTGTAGAATGAGAACTAAGA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108522507 21 + 108979918 ACTGTAGAATGAGAACTAACA i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17658090 21 + 111193037 ACTGTAGAATGAGAACTAACG i macFas5.chr13 I 1 I 5282 s macNem1.NW_012014799v1 10508208 21 - 11597128 ACTGTAGAATGAGCACTAACC i macNem1.NW_012014799v1 I 6195 C 0 s cerAty1.NW_012001187v1 5010433 21 - 5626091 ACTGTAGAATGAGAACTAACA i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 16495277 21 + 107702431 ACTGTAGAACAATAACTAATG i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 310404 21 - 409142 AGTGTAGAACAAGAACTAATG i manLeu1.NW_012101154v1 I 1854 C 0 s calJac3.chr14 14811992 21 + 108792865 ACTGTAGAATGGGAACTAAAG i calJac3.chr14 I 1 C 0 s saiBol1.JH378124 27254796 21 - 28799539 ACTGTAGAATGAAAAGCAATG i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 76913 21 - 3620821 ACTGTAGAATGAGAAGCAATG i cebCap1.NW_016107537v1 I 1 C 0 s tarSyr2.KE939726v1 21281 21 - 73003 AATGCAGAAGGGGAAGATTTA i tarSyr2.KE939726v1 I 1 C 0 s otoGar3.GL873538 19647778 18 - 27850971 AGTGTAGAAGAAGAATCA--- i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e panPan2.chr2A 89821705 1925 + 114371477 I e gorGor5.CYUI01015730v1 830975 1898 - 998796 I a score=2390.000000 s hg38.chrUn_KI270746v1 28609 1 + 66486 A s nomLeu3.chr14 73223858 1 + 94967081 A i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108522528 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17663393 1 + 111193037 A i macFas5.chr13 I 5282 C 0 s macNem1.NW_012014799v1 10508229 1 - 11597128 A i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5010454 1 - 5626091 A i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16495298 1 + 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310425 1 - 409142 A i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812013 1 + 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254817 1 - 28799539 T i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76934 1 - 3620821 T i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21302 1 - 73003 A i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647796 1 - 27850971 A i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e panPan2.chr2A 89821705 1925 + 114371477 I e gorGor5.CYUI01015730v1 830975 1898 - 998796 I a score=190304.000000 s hg38.chrUn_KI270746v1 28610 33 + 66486 GACCACTGATGTAGCAA-TTATTTTCCTCAAGCA s panPan2.chr2A 89823630 33 + 114371477 GACCACTGATGTAGTAA-TTATTTTCATCAAGAA i panPan2.chr2A I 1925 C 0 s gorGor5.CYUI01015730v1 832873 33 - 998796 GACCACTGATGTAGTAA-TTATTTTCATCAAGAA i gorGor5.CYUI01015730v1 I 1898 C 0 s nomLeu3.chr14 73223859 33 + 94967081 GACCACTGATGTAGCAA-TTATTTTCCTCAAGGA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108522529 33 + 108979918 GACCAATGATGTAGCAA-TTATTTTGCTCAAGCA i rheMac8.chr13 C 0 I 1854 s macFas5.chr13 17663394 33 + 111193037 GACCAATGATGTAGCAA-TTATTTTGCTCAAGCA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10508230 33 - 11597128 GACCACTGATGTAGCAA-TTGTTTTCCTCAAGGA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5010455 33 - 5626091 GATCAATGATGTAGCAA-TTATTTTGCTCAAGCA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16495299 33 + 107702431 GATTACTGGTGTAGCAA-TTATTTTCCTCAAGTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310426 33 - 409142 GTCCACTGATGTAGCAA-TTAGTTTTCTCAAGGA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812014 33 + 108792865 GATCACTGATGTAGTAG-TTATTTTCCGCAAGGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254818 33 - 28799539 GACCACCAATGTAGTAA-TTAATTTCATCAAGAA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76935 33 - 3620821 GACCACCAATGTAGTAA-TTATTTTCATCAAGAA i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21303 33 - 73003 GACCACAGATTTGGTGACTCCTTTTGCTCACGA- i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647797 33 - 27850971 GACCACAGACACTAAGA-TTAATTTTGCAGAGGA i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I a score=26614.000000 s hg38.chrUn_KI270746v1 28643 3 + 66486 AGA s panPan2.chr2A 89823663 3 + 114371477 AGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 832906 3 - 998796 AGA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223892 3 + 94967081 AGA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108524416 3 + 108979918 AGA i rheMac8.chr13 I 1854 C 0 s macFas5.chr13 17663427 3 + 111193037 AGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10508263 3 - 11597128 TGA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5010488 3 - 5626091 AGA i cerAty1.NW_012001187v1 C 0 I 5538 s chlSab2.chr14 16495332 3 + 107702431 AGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310459 3 - 409142 AGA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812047 3 + 108792865 AGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254851 3 - 28799539 AGA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76968 3 - 3620821 AGA i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21336 3 - 73003 AGA i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647830 3 - 27850971 AGA i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I a score=24417.000000 s hg38.chrUn_KI270746v1 28646 3 + 66486 GGG s panPan2.chr2A 89823666 3 + 114371477 GGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 832909 3 - 998796 GGG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223895 3 + 94967081 GGG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108524419 3 + 108979918 GGG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17663430 3 + 111193037 GGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10508266 3 - 11597128 GGG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5016029 3 - 5626091 GGG i cerAty1.NW_012001187v1 I 5538 C 0 s chlSab2.chr14 16495335 3 + 107702431 GGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310462 3 - 409142 GGG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812050 3 + 108792865 GGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254854 3 - 28799539 GGG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76971 3 - 3620821 GGG i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21339 3 - 73003 GGG i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647833 3 - 27850971 AAG i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11166411 6732 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I a score=9090.000000 s hg38.chrUn_KI270746v1 28649 1 + 66486 A s panPan2.chr2A 89823669 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 832912 1 - 998796 A i gorGor5.CYUI01015730v1 C 0 C 0 s ponAbe2.chr2a_random 11173143 1 + 13868332 A i ponAbe2.chr2a_random I 6732 I 36115 s nomLeu3.chr14 73223898 1 + 94967081 A i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108524422 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17663433 1 + 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10508269 1 - 11597128 G i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5016032 1 - 5626091 A i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16495338 1 + 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310465 1 - 409142 A i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812053 1 + 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254857 1 - 28799539 A i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76974 1 - 3620821 A i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21342 1 - 73003 A i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647836 1 - 27850971 A i otoGar3.GL873538 C 0 C 0 e papAnu3.chr13 104236816 29378 + 128036923 I a score=89774.000000 s hg38.chrUn_KI270746v1 28650 15 + 66486 TTGTGAGGCAGGAAG s panPan2.chr2A 89823670 15 + 114371477 TTACAAGGCAAGAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 832913 15 - 998796 TTGCAAGGCAAGAAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223899 15 + 94967081 TTGTGAGGCAGGAAG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108524423 15 + 108979918 TTGTGAGGCAGGAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17663434 15 + 111193037 TTGTGAGGCAGGAAG i macFas5.chr13 C 0 I 1855 s macNem1.NW_012014799v1 10508270 15 - 11597128 TTGTGAGGCAGGAAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5016033 15 - 5626091 TTGTGAGGCAGGAAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16495339 15 + 107702431 TTGTGAGCCAGGAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310466 15 - 409142 TTGTGAGGCAGGAAG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812054 11 + 108792865 ATGTG----AGGAAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254858 15 - 28799539 TTACAATGCAGGAAA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76975 15 - 3620821 TTACAAGGCAGGAAA i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21343 15 - 73003 TTGTGAATGGGGAAG i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647837 15 - 27850971 TTGTGAATGAGGAAG i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11173144 36115 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I a score=30780.000000 s hg38.chrUn_KI270746v1 28665 4 + 66486 GAGG--- s panPan2.chr2A 89823685 4 + 114371477 GAGA--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 832928 4 - 998796 GAGA--- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223914 4 + 94967081 GAGG--- i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108524438 4 + 108979918 GAGG--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17665304 4 + 111193037 GAGG--- i macFas5.chr13 I 1855 C 0 s macNem1.NW_012014799v1 10508285 4 - 11597128 GAGG--- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5016048 4 - 5626091 GAGG--- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16495354 4 + 107702431 GAGG--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310481 4 - 409142 GAGG--- i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812065 4 + 108792865 GAGG--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254873 4 - 28799539 GAGG--- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76990 4 - 3620821 GAGG--- i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21358 4 - 73003 GAGG--- i tarSyr2.KE939726v1 C 0 I 214 s otoGar3.GL873538 19647852 7 - 27850971 GAGGGAG i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11173144 36115 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I a score=5947.000000 s hg38.chrUn_KI270746v1 28669 1 + 66486 G s panPan2.chr2A 89823689 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 832932 1 - 998796 G i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 73223918 1 + 94967081 A i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108524442 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17665308 1 + 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10508289 1 - 11597128 G i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5016052 1 - 5626091 G i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16495358 1 + 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310485 1 - 409142 G i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812069 1 + 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254877 1 - 28799539 G i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76994 1 - 3620821 A i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19647859 1 - 27850971 G i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11173144 36115 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE939726v1 21362 214 - 73003 I a score=493108.000000 s hg38.chrUn_KI270746v1 28670 76 + 66486 AAAAGAAGAAGTTATTTATGTAATTTTGGGGTT----TCTGCTGAGGAAACGTGAGT--CAACTCACTTCAGATGCATTTAG s panPan2.chr2A 89823690 76 + 114371477 GAAGGAAGAAGTTATTTAGGTAATTTTGGGGTT----ACTGCTGAGGAAACCTGAGT--GAACTCACTTCAGATGCATTTAG i panPan2.chr2A C 0 I 1771 s gorGor5.CYUI01015730v1 832933 76 - 998796 GAAGGAAGAAGTTATTTAGGTAATTTTCGGGTT----TCTGCTGAGGAAACCTGAGT--GAACTCACTTCAGATGCATTTAG i gorGor5.CYUI01015730v1 C 0 I 1758 s nomLeu3.chr14 73223919 76 + 94967081 AAAAGAAGAAGGTATTTATGTAATTTTGGGGTT----TCTGCTGAGGAAACCTGAGT--GAACTCATTTCAGATGCATTTGG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108524443 76 + 108979918 AAAAGAAGAAGTTATTTATGTAATTTTGTGATT----TCTGCTGAGGAAACCTGAGT--TAACTCACTTCAGATGCATGTAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17665309 76 + 111193037 AAAAGAAGAAGTTATTTATGTAATTTTGTGATT----TCTGCTGAGGAAACCTAAGT--GAACTCACTTCAGATGCATGTAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10508290 76 - 11597128 AAAGGAAGAAGTTATTGATGTAATTTTGGAGTT----TCTGCTGAGGAAACCTGAGT--AAACTTACTTCAGATGCATTTGG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5016053 76 - 5626091 AAAAAAAGAAGTTATTTATGTAATTTTGTGATT----TCTGCTGAGGAAACGTGAGT--GAAGTCACTTTAGATGCATGTAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16495359 73 + 107702431 AAAAGA---ACTTATTTCTGTAATTTTGAGGTT----TCTGCTGAGTAAACCTGAGT--GAACTCACTTCAGATGCATTTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310486 76 - 409142 AAAAGAAGGAGTTATTTATGTAATTTTGGGTTT----TCTGCTGAGGAAACCTGAGT--GAACTCACTTCAGAGGCATTTGG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812070 80 + 108792865 GAAAAAAGAAATTATTTCTTTAATTTTGGGATGGATATCTGCTGAGGAAACCTGAAT--GAGCTCATTTCAGATTCATTTCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27254878 76 - 28799539 GAAGGAATAAGTTTTTTAGGTAATTTTGGGGCT----TCTGCTGAGGAAACCTGGGT--GAACTCACTTCAGATGTATTTAG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 76995 76 - 3620821 GAAGGAATAAGTTTTTTAGGTAATTTTGGGGCT----TCTGCTGAGGAAACCTGGGT--GAACTCACTTCAGATGTATTTAG i cebCap1.NW_016107537v1 C 0 I 66 s tarSyr2.KE939726v1 21576 76 - 73003 AAGAAAAGAAGTTAGCTAATTGATTTTGGAGTT----AATTTGGAGGAAACTTGAGA--GAATTCACATCAGATGGTTTCAG i tarSyr2.KE939726v1 I 214 I 6 s otoGar3.GL873538 19647860 78 - 27850971 AAAGAAGGAAGTCAGCTAGGTAATTATGTAGTT----AATGATGAGAAAACTTGAATGAGAATTCACTTCAGGTGGCTTCAA i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11173144 36115 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I a score=26702.000000 s hg38.chrUn_KI270746v1 28746 15 + 66486 ------CATGTTTACA-CAAAA s nomLeu3.chr14 73223995 15 + 94967081 ------AATATTTGCA-TAAAA i nomLeu3.chr14 C 0 I 1 s rheMac8.chr13 108524519 15 + 108979918 ------CATATTTGCA-GAAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17665385 15 + 111193037 ------CATATTTGCA-GAAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10508366 16 - 11597128 ------AATATTTGCATAAAAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5016129 15 - 5626091 ------CATATTTGCA-GAAAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16495432 15 + 107702431 ------AACATTTGCA-TAAAA i chlSab2.chr14 C 0 I 8459 s manLeu1.NW_012101154v1 310562 15 - 409142 ------CGTATTTGCA-TAAAG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812150 15 + 108792865 ------AATATTTACA-TATAA i calJac3.chr14 C 0 I 1 s saiBol1.JH378124 27254954 15 - 28799539 ------AATATTTGCA-TGCCA i saiBol1.JH378124 C 0 I 1 s tarSyr2.KE939726v1 21658 13 - 73003 ------CACACTCACA-CAG-- i tarSyr2.KE939726v1 I 6 C 0 s otoGar3.GL873538 19647938 17 - 27850971 TATACTTATACTCACA-C---- i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11173144 36115 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e cebCap1.NW_016107537v1 77071 66 - 3620821 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=122720.000000 s hg38.chrUn_KI270746v1 28761 50 + 66486 AGGATTTGATTT-TGGCAGCTCCAGGAACTACTGGATGAAGCAAAGAAAGC s nomLeu3.chr14 73224011 50 + 94967081 AAGATTTGATTT-TGGCTGCTCCAAGAACTACTGGAAGCAGGAAACAATGC i nomLeu3.chr14 I 1 C 0 s rheMac8.chr13 108524534 50 + 108979918 AAGATTTGATTT-TGGCAGCTTCTGAAACTACAGGATGCAGCAAGGAATGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17665400 50 + 111193037 AAGATTTGATTT-TGGCAGCTTCTGAAACTACAGGATGCAGCAAGGAATGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10508382 50 - 11597128 AAGATTTGATTT-TGGCTGCTGCAGGAGCTACTGGAAGCAGGAAATAATGC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5016144 50 - 5626091 AAGATTTGATTT-AGGCAGCTCCTGGAACTACAGAATGCAGGAAAGAATGC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16503906 50 + 107702431 AAGATTTGATTT-TGGCTGATCCATGAACTACTGGATGAAGGAAACAATGC i chlSab2.chr14 I 8459 C 0 s manLeu1.NW_012101154v1 310577 50 - 409142 AAAATTTGATTT-TGGAAACACCAGGAACTACAGGATGCAGGAAAGAATGC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812166 50 + 108792865 AAGATTTGATTT-TGGCTGCTTCAGGAATGACTTGAAGCAGGAAAAAGTGC i calJac3.chr14 I 1 C 0 s saiBol1.JH378124 27254970 50 - 28799539 AAGATTTGATTTCTACCTTCTCCAATGACTGCTGGAATCTGTAAGGAGTA- i saiBol1.JH378124 I 1 C 0 s tarSyr2.KE939726v1 21671 49 - 73003 AAGATTACATTA-TCACTACT-CAGAGATGACCAAAAGCCAGAGGGAGTGC i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647955 43 - 27850971 GGAACATGA----GAGATGCT-CAGAGATTA---GTAACAGGGGGAAATGC i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11173144 36115 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e cebCap1.NW_016107537v1 77071 66 - 3620821 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=107643.000000 s hg38.chrUn_KI270746v1 28811 21 + 66486 TAGAATTGGGATAAACCACAT s nomLeu3.chr14 73224061 21 + 94967081 TAGAACTGGGATAAACCACAG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108524584 21 + 108979918 TAGAATTAGGATAAACCACAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17665450 21 + 111193037 TAGAATTAGGATAAACCACAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10508432 21 - 11597128 TAGAATTGGGATAAACCACAT i macNem1.NW_012014799v1 C 0 I 3911 s cerAty1.NW_012001187v1 5016194 21 - 5626091 TAGAATTAGGATACACCGCAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16503956 21 + 107702431 TAGAATTGGGAGAAACCACCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310627 21 - 409142 TAGAATTGGTGTAAACCACAT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812216 21 + 108792865 TATAATTGGGATTAACCACCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255020 21 - 28799539 TAGAATTGGGATCAACCACAG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 77137 21 - 3620821 TAGAATTGGGATAAACCACAG i cebCap1.NW_016107537v1 I 66 C 0 s tarSyr2.KE939726v1 21720 19 - 73003 TAGAATT--GATAAACCACAG i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19647998 21 - 27850971 TAGAATTGGGGTAAACCACAG i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11173144 36115 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=105182.000000 s hg38.chrUn_KI270746v1 28832 23 + 66486 TGACTAATTACTTCTCTTCGTTA s nomLeu3.chr14 73224082 23 + 94967081 TGACTCATTACTCCTCTTTGTTA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108524605 23 + 108979918 TGACTAATTACTCCTCTTTGTTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17665471 23 + 111193037 TGACTAATTACTCTTCTTTGTTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10512364 23 - 11597128 TGACTAATTACTCCTCTTTGTAA i macNem1.NW_012014799v1 I 3911 C 0 s cerAty1.NW_012001187v1 5016215 23 - 5626091 TGACTAATTACTCCTCTTTGTAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16503977 23 + 107702431 TGACTCCTTACTCCTCTTTGTTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310648 23 - 409142 TGACTAATTACTGCTCTTTGTTA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812237 23 + 108792865 TGACTTATTACTCTTCTGTGTTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255041 23 - 28799539 TGACTCATTATTCCTGTTTATTA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 77158 23 - 3620821 TGACTCATTATTCCTGTTTATTA i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21739 23 - 73003 CAACTCATTTCTCCTCTCCACAA i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19648019 23 - 27850971 TAGCACATTTCTGCTCTCCATTA i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11173144 36115 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=79280.000000 s hg38.chrUn_KI270746v1 28855 11 + 66486 CTATTAGGCAT s ponAbe2.chrUn 62277986 11 - 72422247 CTATTAGGCGT i ponAbe2.chrUn n 36115 C 0 s nomLeu3.chr14 73224105 11 + 94967081 CTATTAGGCAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108524628 11 + 108979918 CTATTAGGCAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17665494 11 + 111193037 CTATTAGGCAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10512387 11 - 11597128 CTATTAGGCAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5016238 11 - 5626091 CTATTAGGCAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16504000 11 + 107702431 CTATTCGGCAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310671 11 - 409142 CTATTAGGCAT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812260 11 + 108792865 CTATTAGGCAT i calJac3.chr14 C 0 I 2 s saiBol1.JH378124 27255064 11 - 28799539 CTATCAGACAT i saiBol1.JH378124 C 0 I 2 s cebCap1.NW_016107537v1 77181 11 - 3620821 CTATTAGACAT i cebCap1.NW_016107537v1 C 0 T 65523 s tarSyr2.KE939726v1 21762 11 - 73003 CTATTGGGCAT i tarSyr2.KE939726v1 C 0 I 2 s otoGar3.GL873538 19648042 11 - 27850971 CTGTCAGGTAT i otoGar3.GL873538 C 0 C 0 e papAnu3.chr13 104236816 29378 + 128036923 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=4695.000000 s hg38.chrUn_KI270746v1 28866 2 + 66486 AA s ponAbe2.chrUn 62277997 2 - 72422247 AA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr14 73224116 2 + 94967081 CA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108524639 2 + 108979918 AA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17665505 2 + 111193037 CA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10512398 2 - 11597128 CA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5016249 2 - 5626091 CA i cerAty1.NW_012001187v1 C 0 I 6069 s chlSab2.chr14 16504011 2 + 107702431 CA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 310682 2 - 409142 GA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812273 2 + 108792865 GA i calJac3.chr14 I 2 C 0 s saiBol1.JH378124 27255077 2 - 28799539 GA i saiBol1.JH378124 I 2 C 0 s cebCap1.NW_016107537v1 11669 2 - 3620821 GA i cebCap1.NW_016107537v1 T 65523 C 0 s tarSyr2.KE939726v1 21775 2 - 73003 AA i tarSyr2.KE939726v1 I 2 C 0 s otoGar3.GL873538 19648053 2 - 27850971 CA i otoGar3.GL873538 C 0 C 0 e papAnu3.chr13 104236816 29378 + 128036923 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=10851.000000 s hg38.chrUn_KI270746v1 28868 3 + 66486 GAC s ponAbe2.chrUn 62277999 3 - 72422247 GAC i ponAbe2.chrUn C 0 I 2 s nomLeu3.chr14 73224118 3 + 94967081 GAG i nomLeu3.chr14 C 0 I 2 s rheMac8.chr13 108524641 3 + 108979918 GAC i rheMac8.chr13 C 0 I 2171 s macFas5.chr13 17665507 3 + 111193037 GAC i macFas5.chr13 C 0 I 3805 s macNem1.NW_012014799v1 10512400 3 - 11597128 GAC i macNem1.NW_012014799v1 C 0 I 1740 s cerAty1.NW_012001187v1 5022320 3 - 5626091 GAT i cerAty1.NW_012001187v1 I 6069 C 0 s chlSab2.chr14 16504013 3 + 107702431 GAG i chlSab2.chr14 C 0 I 2 s manLeu1.NW_012101154v1 310684 3 - 409142 GAC i manLeu1.NW_012101154v1 C 0 I 2855 s calJac3.chr14 14812275 3 + 108792865 AAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255079 3 - 28799539 GAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 11671 3 - 3620821 GAT i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21777 3 - 73003 AAT i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19648055 3 - 27850971 AAG i otoGar3.GL873538 C 0 C 0 e papAnu3.chr13 104236816 29378 + 128036923 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=7578.000000 s hg38.chrUn_KI270746v1 28871 2 + 66486 AT s ponAbe2.chrUn 62278004 2 - 72422247 AT i ponAbe2.chrUn I 2 C 0 s nomLeu3.chr14 73224123 2 + 94967081 AC i nomLeu3.chr14 I 2 C 0 s rheMac8.chr13 108526815 2 + 108979918 AT i rheMac8.chr13 I 2171 I 3701 s macFas5.chr13 17669315 2 + 111193037 AC i macFas5.chr13 I 3805 C 0 s cerAty1.NW_012001187v1 5022323 2 - 5626091 AC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16504018 2 + 107702431 AC i chlSab2.chr14 I 2 C 0 s manLeu1.NW_012101154v1 313542 2 - 409142 AC i manLeu1.NW_012101154v1 I 2855 C 0 s calJac3.chr14 14812278 2 + 108792865 AC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255082 2 - 28799539 AC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 11674 2 - 3620821 AG i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21780 2 - 73003 AT i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19648058 2 - 27850971 AT i otoGar3.GL873538 C 0 C 0 e papAnu3.chr13 104236816 29378 + 128036923 I e macNem1.NW_012014799v1 10512403 1740 - 11597128 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=8281.000000 s hg38.chrUn_KI270746v1 28873 1 + 66486 A s ponAbe2.chrUn 62278006 1 - 72422247 A i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr14 73224125 1 + 94967081 A i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108530518 1 + 108979918 A i rheMac8.chr13 I 3701 C 0 s macFas5.chr13 17669317 1 + 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10514143 1 - 11597128 A i macNem1.NW_012014799v1 I 1740 C 0 s cerAty1.NW_012001187v1 5022325 1 - 5626091 A i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16504020 1 + 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 313544 1 - 409142 A i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812280 1 + 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255084 1 - 28799539 A i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 11676 1 - 3620821 A i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21782 1 - 73003 A i tarSyr2.KE939726v1 C 0 C 0 s otoGar3.GL873538 19648060 1 - 27850971 A i otoGar3.GL873538 C 0 I 1860 e papAnu3.chr13 104236816 29378 + 128036923 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=84836.000000 s hg38.chrUn_KI270746v1 28874 21 + 66486 TCTTTTGTTGATTTTTGTTA-T s ponAbe2.chrUn 62278007 21 - 72422247 TCTTTTGTTGATTTTTGTTA-T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr14 73224126 21 + 94967081 TGTTTTGTTGACTTTAGTTA-T i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108530519 21 + 108979918 TGTTTTGTTGATTTTACTTA-T i rheMac8.chr13 C 0 I 5029 s macFas5.chr13 17669318 21 + 111193037 TGTTTTCTTGATTTTAGTTG-T i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10514144 21 - 11597128 TGTTTTGGTGATTTTACTTA-T i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5022326 21 - 5626091 TGTTTTGTTGATTTTACTTA-T i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16504021 21 + 107702431 TGTTTTGTTGATATTAGTTA-T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 313545 21 - 409142 TGTTTTGTTGATTTTAGTTA-T i manLeu1.NW_012101154v1 C 0 I 1 s calJac3.chr14 14812281 21 + 108792865 TGTTTTGTTGATTTTAGTTA-T i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255085 14 - 28799539 TTTT-------TATTAGTTA-T i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 11677 22 - 3620821 TGTTTTGTTGATTTTAATTATT i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21783 21 - 73003 TATTAAGTGGCTGTTAGTTA-A i tarSyr2.KE939726v1 C 0 C 0 e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=65716.000000 s hg38.chrUn_KI270746v1 28895 14 + 66486 AAAAATTAGATAAA s ponAbe2.chrUn 62278028 14 - 72422247 AAAAATTAGATAAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr14 73224147 14 + 94967081 AAACATGAGATAAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108535569 14 + 108979918 AAAAATGAGATAAA i rheMac8.chr13 I 5029 C 0 s macFas5.chr13 17669339 14 + 111193037 AAAAATTGGATAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10514165 14 - 11597128 AATAATGAGATAAA i macNem1.NW_012014799v1 C 0 I 1851 s cerAty1.NW_012001187v1 5022347 14 - 5626091 AAAAATGAGATAAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16504042 14 + 107702431 AAAAATGAGATAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 313567 14 - 409142 AAAAATGAGATAAA i manLeu1.NW_012101154v1 I 1 C 0 s calJac3.chr14 14812302 14 + 108792865 ACAAATTAGACAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255099 14 - 28799539 TCAAATGAGTTAAA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 11699 14 - 3620821 AAAAACAAGATAAA i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21804 14 - 73003 TGAAATGGGATTAA i tarSyr2.KE939726v1 C 0 C 0 e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=15981.000000 s hg38.chrUn_KI270746v1 28909 4 + 66486 CTTG s ponAbe2.chrUn 62278042 4 - 72422247 CTGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr14 73224161 4 + 94967081 CTTG i nomLeu3.chr14 C 0 N 0 s rheMac8.chr13 108535583 4 + 108979918 CTTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17669353 4 + 111193037 GTTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10516030 4 - 11597128 CTTG i macNem1.NW_012014799v1 I 1851 C 0 s cerAty1.NW_012001187v1 5022361 4 - 5626091 CTTG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16504056 4 + 107702431 CCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 313581 4 - 409142 CTTG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812316 4 + 108792865 TTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255113 4 - 28799539 ATTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 11713 4 - 3620821 CTTG i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21818 4 - 73003 TTTG i tarSyr2.KE939726v1 C 0 C 0 e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=65311.000000 s hg38.chrUn_KI270746v1 28913 15 + 66486 -------AAT---ATCAATACATTG s ponAbe2.chrUn 62278046 18 - 72422247 -------AATATCATCAATACATTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr14 47836353 15 + 94967081 -------AAT---ATGCATATATTG i nomLeu3.chr14 N 0 C 0 s rheMac8.chr13 108535587 15 + 108979918 -------AAT---ATGAATACATTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17669357 15 + 111193037 -------AAC---GTGAATACATTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10516034 15 - 11597128 -------AAT---ATGAATACATTG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5022365 15 - 5626091 -------AAT---ATGAATACATTG i cerAty1.NW_012001187v1 C 0 I 1844 s chlSab2.chr14 16504060 15 + 107702431 -------AAT---ATGAATACATCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 313585 15 - 409142 -------AAT---ATGAATACATTG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812320 15 + 108792865 -------AAT---ATTAATATATTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255117 15 - 28799539 -------AAT---ATGAATAGATTA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 11717 15 - 3620821 -------AAT---ATGAATACATTG i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21822 22 - 73003 AATAAGGAAC---CTTAGCACTTTA i tarSyr2.KE939726v1 C 0 C 0 e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=5955.000000 s hg38.chrUn_KI270746v1 28928 4 + 66486 GCTT s ponAbe2.chrUn 62278064 4 - 72422247 GCTT i ponAbe2.chrUn C 0 n 0 s nomLeu3.chr14 47836368 4 + 94967081 GCTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108535602 4 + 108979918 CCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17669372 4 + 111193037 GCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10516049 4 - 11597128 GCTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5024224 4 - 5626091 GCTT i cerAty1.NW_012001187v1 I 1844 C 0 s chlSab2.chr14 16504075 4 + 107702431 CCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 313600 4 - 409142 CCTT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812335 4 + 108792865 TCCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255132 4 - 28799539 GGTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 11732 4 - 3620821 GCTC i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21844 1 - 73003 A--- i tarSyr2.KE939726v1 C 0 C 0 e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=145391.000000 s hg38.chrUn_KI270746v1 28932 46 + 66486 CATTCATCCAAGTGCTATCTCATGG-CTAAAATAGCTATTTAATGAA s nomLeu3.chr14 47836372 45 + 94967081 TGCTTTTCAATTAGCTAACTT-TGG-ATAAAGTAGCAGTTTAATGAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108535606 46 + 108979918 CCTTGTTCAAGGAGCTAACTCTTGG-ATAAAATAGCTATTTAATGAA i rheMac8.chr13 C 0 T 59801 s macFas5.chr13 17669376 46 + 111193037 CTTTGATCAAAGAGCAAAGTCTTGG-ATAAAATCGCTATTTAATGAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10516053 47 - 11597128 CTTTGATCAAAGAGGTAACTCTTGGAAAAAAATCGCGATTTAATGAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5024228 46 - 5626091 CTTTGATCAAAGAGCAAAGTCTTGG-ATAGAATCGCTATTTAATGAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16504079 46 + 107702431 CCTTGTTCAAGGAGCTAACTCTTGG-ATAAAATAGCTATTTAATGAA i chlSab2.chr14 C 0 T 10154 s manLeu1.NW_012101154v1 313604 46 - 409142 CCTTGTTCAAGGAGCTAACTCTTGG-ATAAAATAGCTATTTAATGAA i manLeu1.NW_012101154v1 C 0 T 55624 s calJac3.chr14 14812339 46 + 108792865 CGCTGTTCAAGGAGCTATCTGTTGG-ATAAAATAGCTATTTAATAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255136 38 - 28799539 TTTTGCT-----AGCT---TTTTTA-TTAAAATAGCTATTTAATGAA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 11736 46 - 3620821 CGTTGGTCAAGGAGCTAACTCTTGG-ATAAAATAGCTACTTAATGAA i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE939726v1 21845 37 - 73003 ---------GAAAGCTAATTTTTGG-ATAAGATAGCTATTGGATAAC i tarSyr2.KE939726v1 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=80664.000000 s hg38.chrUn_KI270746v1 28978 23 + 66486 TATGATTTAGAGGATAGCATGAT s nomLeu3.chr14 47836417 23 + 94967081 AATGCTTTAGAGAATAACATGAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108475851 23 + 108979918 TATTCTTTAGAGAAGAGCATGAT i rheMac8.chr13 T 59801 C 0 s macFas5.chr13 17669422 23 + 111193037 TATTCTTTAGAGAATAGCATGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10516100 23 - 11597128 TATTCTTTAGAGAATAGCATGAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5024274 23 - 5626091 TATTCTGTAGAGAATAGCATGAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16493971 23 + 107702431 TATTCTTTAGAGAAGAGCATGAT i chlSab2.chr14 T 10154 C 0 s manLeu1.NW_012101154v1 258026 23 - 409142 TTTTCTTTAGAGAAGAGCATGAT i manLeu1.NW_012101154v1 T 55624 C 0 s calJac3.chr14 14812385 22 + 108792865 ATTTC-TTAGAGAATAATGTGAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255174 23 - 28799539 ATTTCTTTATAGATTAAAGTGAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 11782 23 - 3620821 ATTTCTTTAGAGGATAACATGAT i cebCap1.NW_016107537v1 C 0 I 67064 s tarSyr2.KE939726v1 21882 21 - 73003 AATTCTTTAGA--TTAACATGAT i tarSyr2.KE939726v1 C 0 I 8 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=27947.000000 s hg38.chrUn_KI270746v1 29001 9 + 66486 CCTCCTAAC s nomLeu3.chr14 47836440 9 + 94967081 ACTTCAAAC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108475874 9 + 108979918 ACTCCTAGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17669445 9 + 111193037 ACTCCTAAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10516123 9 - 11597128 ACTCCTAAC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5024297 9 - 5626091 ACTCCTAAC i cerAty1.NW_012001187v1 C 0 T 41069 s chlSab2.chr14 16493994 9 + 107702431 ACTCCTAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 258049 9 - 409142 ACTCCTAGC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812407 9 + 108792865 ACTTGAAAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255197 9 - 28799539 ACTCTAAAC i saiBol1.JH378124 C 0 C 0 s tarSyr2.KE939726v1 21911 9 - 73003 ACTACTAAT i tarSyr2.KE939726v1 I 8 I 4 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=19281.000000 s hg38.chrUn_KI270746v1 29010 5 + 66486 GAGAC s nomLeu3.chr14 47836449 5 + 94967081 CAGAC i nomLeu3.chr14 C 0 I 6 s rheMac8.chr13 108475883 5 + 108979918 AAGAC i rheMac8.chr13 C 0 I 6 s macFas5.chr13 17669454 5 + 111193037 AAGAC i macFas5.chr13 C 0 I 2861 s macNem1.NW_012014799v1 10516132 5 - 11597128 AAGAC i macNem1.NW_012014799v1 C 0 I 6 s cerAty1.NW_012001187v1 4983237 5 - 5626091 AAGAC i cerAty1.NW_012001187v1 T 41069 I 6 s chlSab2.chr14 16494003 5 + 107702431 AAGAC i chlSab2.chr14 C 0 I 6 s manLeu1.NW_012101154v1 258058 5 - 409142 AAGAC i manLeu1.NW_012101154v1 C 0 I 6 s calJac3.chr14 14812416 5 + 108792865 AAGAC i calJac3.chr14 C 0 I 6 s saiBol1.JH378124 27255206 5 - 28799539 CAGAC i saiBol1.JH378124 C 0 I 7 s tarSyr2.KE939726v1 21924 5 - 73003 GAAAC i tarSyr2.KE939726v1 I 4 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=71587.000000 s hg38.chrUn_KI270746v1 29015 23 + 66486 -AAAAACAACTATAATGTTGAGTT s nomLeu3.chr14 47836460 23 + 94967081 -AGAAACAAAATTAATGTTGAATT i nomLeu3.chr14 I 6 C 0 s rheMac8.chr13 108475894 23 + 108979918 -AGAAACAAAAATAATGTTGAATT i rheMac8.chr13 I 6 C 0 s macFas5.chr13 17672320 23 + 111193037 -AGAAGCAAAAATTATGTTGAAAT i macFas5.chr13 I 2861 I 2883 s macNem1.NW_012014799v1 10516143 23 - 11597128 -AGAAACAAAAATACTGTTGAATT i macNem1.NW_012014799v1 I 6 C 0 s cerAty1.NW_012001187v1 4983248 23 - 5626091 -AGAAACAAAAATAATGTTGAATT i cerAty1.NW_012001187v1 I 6 C 0 s chlSab2.chr14 16494014 23 + 107702431 -AGAAACAAAAATACTGTTGAATT i chlSab2.chr14 I 6 C 0 s manLeu1.NW_012101154v1 258069 23 - 409142 -AGAAACAAAAATAATGTTGAATT i manLeu1.NW_012101154v1 I 6 C 0 s calJac3.chr14 14812427 23 + 108792865 -AGAAACAACAATAATTTTGAATT i calJac3.chr14 I 6 C 0 s saiBol1.JH378124 27255218 21 - 28799539 -AGAG--AAAAGTAATGTTGAATG i saiBol1.JH378124 I 7 C 0 s tarSyr2.KE939726v1 21929 24 - 73003 AAAAAAACATCATAGTGTTAATTT i tarSyr2.KE939726v1 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=19059.000000 s hg38.chrUn_KI270746v1 29038 6 + 66486 CATCAA s nomLeu3.chr14 47836483 6 + 94967081 CATTAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108475917 6 + 108979918 CATCAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17675226 6 + 111193037 CATTAA i macFas5.chr13 I 2883 C 0 s macNem1.NW_012014799v1 10516166 6 - 11597128 CATCAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 4983271 6 - 5626091 CATCAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16494037 6 + 107702431 CATCAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 258092 6 - 409142 CATCAA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14812450 6 + 108792865 TATTAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255239 6 - 28799539 AGTTAA i saiBol1.JH378124 C 0 C 0 s tarSyr2.KE939726v1 21953 6 - 73003 CTTGAA i tarSyr2.KE939726v1 C 0 n 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=57993.000000 s hg38.chrUn_KI270746v1 29044 17 + 66486 CTGACTCTTAAAATGGT s nomLeu3.chr14 47836489 17 + 94967081 TTGACTTTTAAAATTGT i nomLeu3.chr14 C 0 I 3642 s rheMac8.chr13 108475923 17 + 108979918 CTGACCCTTAAAATGGT i rheMac8.chr13 C 0 I 64161 s macFas5.chr13 17675232 17 + 111193037 TTGAATCCTAAAATGGT i macFas5.chr13 C 0 I 1454 s macNem1.NW_012014799v1 10516172 17 - 11597128 CTGACCCTTAAAATGGT i macNem1.NW_012014799v1 C 0 I 26327 s cerAty1.NW_012001187v1 4983277 17 - 5626091 CTGACCCTTAAAATGGT i cerAty1.NW_012001187v1 C 0 I 48322 s chlSab2.chr14 16494043 17 + 107702431 CTGACCCTTAAAATGGT i chlSab2.chr14 C 0 I 17098 s manLeu1.NW_012101154v1 258098 17 - 409142 CTGACCCTTAAAATGGT i manLeu1.NW_012101154v1 C 0 I 59997 s calJac3.chr14 14812456 17 + 108792865 TTGACCCTTAAAATGGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27255245 17 - 28799539 CTGAATCCTAAAATGGT i saiBol1.JH378124 C 0 I 1449 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE939726v1 21959 0 - 73003 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=910.000000 s hg38.chrUn_KI270746v1 29061 1 + 66486 T s nomLeu3.chr14 47840148 1 + 94967081 t i nomLeu3.chr14 I 3642 C 0 s macFas5.chr13 17676703 1 + 111193037 t i macFas5.chr13 I 1454 C 0 s calJac3.chr14 14812473 1 + 108792865 T i calJac3.chr14 C 0 I 17338 s saiBol1.JH378124 27256711 1 - 28799539 t i saiBol1.JH378124 I 1449 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE939726v1 21959 0 - 73003 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e manLeu1.NW_012101154v1 258115 59997 - 409142 I e chlSab2.chr14 16494060 17098 + 107702431 I e cerAty1.NW_012001187v1 4983294 48322 - 5626091 I e macNem1.NW_012014799v1 10516189 26327 - 11597128 I e rheMac8.chr13 108475940 64161 + 108979918 I e panPan2.chr2A 89823766 1771 + 114371477 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=67.000000 s hg38.chrUn_KI270746v1 29062 1 + 66486 C s nomLeu3.chr14 47840149 1 + 94967081 t i nomLeu3.chr14 C 0 C 0 s macFas5.chr13 17676704 1 + 111193037 t i macFas5.chr13 C 0 C 0 s saiBol1.JH378124 27256712 1 - 28799539 c i saiBol1.JH378124 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE939726v1 21959 0 - 73003 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e manLeu1.NW_012101154v1 258115 59997 - 409142 I e chlSab2.chr14 16494060 17098 + 107702431 I e cerAty1.NW_012001187v1 4983294 48322 - 5626091 I e macNem1.NW_012014799v1 10516189 26327 - 11597128 I e rheMac8.chr13 108475940 64161 + 108979918 I e panPan2.chr2A 89823766 1771 + 114371477 I e calJac3.chr14 14812474 17338 + 108792865 I e gorGor5.CYUI01015730v1 833009 1758 - 998796 I a score=13648.000000 s hg38.chrUn_KI270746v1 29063 18 + 66486 ACAGGCGTGAACCACCGT--- s panPan2.chr2A 89825537 18 + 114371477 acaggcgtgaaccaccgt--- i panPan2.chr2A I 1771 C 0 s gorGor5.CYUI01015730v1 834767 18 - 998796 acaggtgtgaaccaccat--- i gorGor5.CYUI01015730v1 I 1758 C 0 s nomLeu3.chr14 47840150 18 + 94967081 acaggcatgaactgctgt--- i nomLeu3.chr14 C 0 C 0 s macFas5.chr13 17676705 18 + 111193037 acaggcatgagccaccgg--- i macFas5.chr13 C 0 I 1 s saiBol1.JH378124 27256713 21 - 28799539 acaggagttagctgccacCAC i saiBol1.JH378124 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE939726v1 21959 0 - 73003 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e manLeu1.NW_012101154v1 258115 59997 - 409142 I e chlSab2.chr14 16494060 17098 + 107702431 I e cerAty1.NW_012001187v1 4983294 48322 - 5626091 I e macNem1.NW_012014799v1 10516189 26327 - 11597128 I e rheMac8.chr13 108475940 64161 + 108979918 I e calJac3.chr14 14812474 17338 + 108792865 I a score=8040.000000 s hg38.chrUn_KI270746v1 29081 3 + 66486 GCC s panPan2.chr2A 89825555 3 + 114371477 gcc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 834785 3 - 998796 gcc i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47840168 3 + 94967081 gcc i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108540101 3 + 108979918 gcc i rheMac8.chr13 I 64161 C 0 s macFas5.chr13 17676724 3 + 111193037 gcc i macFas5.chr13 I 1 C 0 s macNem1.NW_012014799v1 10542516 3 - 11597128 gcc i macNem1.NW_012014799v1 I 26327 C 0 s manLeu1.NW_012101154v1 318112 3 - 409142 gcc i manLeu1.NW_012101154v1 I 59997 C 0 s saiBol1.JH378124 27256734 3 - 28799539 ACA i saiBol1.JH378124 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE939726v1 21959 0 - 73003 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e chlSab2.chr14 16494060 17098 + 107702431 I e cerAty1.NW_012001187v1 4983294 48322 - 5626091 I e calJac3.chr14 14812474 17338 + 108792865 I a score=2997.000000 s hg38.chrUn_KI270746v1 29084 1 + 66486 T s panPan2.chr2A 89825558 1 + 114371477 t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 834788 1 - 998796 t i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47840171 1 + 94967081 t i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108540104 1 + 108979918 t i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17676727 1 + 111193037 t i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10542519 1 - 11597128 t i macNem1.NW_012014799v1 C 0 C 0 s chlSab2.chr14 16511158 1 + 107702431 T i chlSab2.chr14 I 17098 C 0 s manLeu1.NW_012101154v1 318115 1 - 409142 t i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27256737 1 - 28799539 C i saiBol1.JH378124 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE939726v1 21959 0 - 73003 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e cerAty1.NW_012001187v1 4983294 48322 - 5626091 I e calJac3.chr14 14812474 17338 + 108792865 I a score=23733.000000 s hg38.chrUn_KI270746v1 29085 7 + 66486 GGCCTAA s panPan2.chr2A 89825559 7 + 114371477 ggccTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 834789 7 - 998796 ggccTAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47840172 7 + 94967081 ggccTAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108540105 7 + 108979918 ggccTTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17676728 7 + 111193037 ggccTTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10542520 7 - 11597128 ggccTTA i macNem1.NW_012014799v1 C 0 C 0 s chlSab2.chr14 16511159 7 + 107702431 GGCCTTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 318116 7 - 409142 ggccTTA i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27256738 7 - 28799539 AACCTGA i saiBol1.JH378124 C 0 C 0 s tarSyr2.KE948426v1 9183 7 + 45822 GATTTAA i tarSyr2.KE948426v1 I 1626 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e cerAty1.NW_012001187v1 4983294 48322 - 5626091 I e calJac3.chr14 14812474 17338 + 108792865 I a score=44279.000000 s hg38.chrUn_KI270746v1 29092 10 + 66486 AAATATAAGG s panPan2.chr2A 89825566 10 + 114371477 AAATATAAGG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 834796 10 - 998796 AAATATAAGG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47840179 10 + 94967081 AAATATAAGG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108540112 10 + 108979918 AAATACAAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17676735 10 + 111193037 AAATACAAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10542527 10 - 11597128 AAATACAAGA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5031616 10 - 5626091 AAATACAAGA i cerAty1.NW_012001187v1 I 48322 C 0 s chlSab2.chr14 16511166 10 + 107702431 AAATACAAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 318123 10 - 409142 AAATACAAGA i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27256745 9 - 28799539 -AAAATAAGG i saiBol1.JH378124 C 0 C 0 s tarSyr2.KE948426v1 9190 10 + 45822 AAACGTAAGC i tarSyr2.KE948426v1 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e otoGar3.GL873538 19648061 1860 - 27850971 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e calJac3.chr14 14812474 17338 + 108792865 I a score=48052.000000 s hg38.chrUn_KI270746v1 29102 10 + 66486 TTTTATTCAG s panPan2.chr2A 89825576 10 + 114371477 TTTTATTCAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 834806 10 - 998796 TTTTATTCAG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47840189 10 + 94967081 TTTTATTCAG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108540122 10 + 108979918 TTTTATTCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17676745 10 + 111193037 TTTTATTCAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10542537 10 - 11597128 TTTTATTCAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5031626 10 - 5626091 TTTTATTCAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16511176 10 + 107702431 TTTTATTCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 318133 10 - 409142 TTTTATTCAG i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27256754 10 - 28799539 GTGTATTCAG i saiBol1.JH378124 C 0 C 0 s tarSyr2.KE948426v1 9200 9 + 45822 ATTAAGTTA- i tarSyr2.KE948426v1 C 0 C 0 s otoGar3.GL873538 19649921 10 - 27850971 TTTAAGTCAG i otoGar3.GL873538 I 1860 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e cebCap1.NW_016107537v1 11805 67064 - 3620821 I e calJac3.chr14 14812474 17338 + 108792865 I a score=751622.000000 s hg38.chrUn_KI270746v1 29112 123 + 66486 ATGTTTCTACTTTTACATTTTGATACTCTGAAGTTTCCAATTTGGAATTTCA-ATAG-TTTTTAGCGATTTAAAGAGATCAATTTTGACACTGTAAAATATTTGTTTTGCTTTAAAAGTCAATTC s panPan2.chr2A 89825586 123 + 114371477 ATGTTTCTACTTTTACATTTTGATACTCTGAAGTTTCCAATTTGGAATTTCA-ATAG-TTTTTAGCGATTTAAAGAGATCAATTTTGATACTGTAAAATATTTGTTTTGCTTTAAAAGTCAGTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 834816 122 - 998796 ATGTTTCTACTTTTACATTTTGATACTCTGAAGTTTCCAATTTGGAATTTCA-ATAG-TTTTTAGCGAATTAAAGAGATCAATTTTGATACTGTAAAATATTTGTTTTGCTTTAAAAGTCA-TTC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47840199 123 + 94967081 ATGTTTCTCCTTTTACATTTTGATACTCTGAAGTTTCCGATTTGGAATTTCA-ATAG-TTTTTAGCGATTTAAAGAGGTCAATTTTGATACTGTAAAATATTTGTTTTGCTTTAAAAGTCAGTTC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108540132 123 + 108979918 ATGTTTCTACTTTTACATTTTGATACTCTGAAGTTTCCAATTTGGAATTTCA-ATGT-TTTTTAGCTATTTAAAGAGATCTATTTTGGTACTCTAAAATATTTGTTTTGCTTTAAAAGTCAGTTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17676755 123 + 111193037 ATGTTTCTACTTTTACATTTTGATACTCTGAAGTTTCCAATTTGGAATTTCA-CTGT-TTTTTAGCTATTTAAAGAGATCTATTTTGGTACTCTAAAATATTTGTTTTGCTTTAAAAGTCAGTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10542547 123 - 11597128 ATGTTTCTACTTTTACATTTTGATACTCTGAAGTTTCCAATTTGGAATTTCA-ATGT-TTTTTAGCTATTTAAAGAGATCTATTTTGGTACTCTAAAATATTTGTTTTGCTTTAAAAGTCAGTTC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5031636 123 - 5626091 ATGTTTCTACTTTTGCATTTTGATACTCTGAAGTTTCCAATTTGGAATTTCA-ATGG-TTTTTAGCTATTTAAAGAGATCTATTTTGGTACTCTAAAATATTTGTTTTGCTTTAAAAGTCAGTTC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16511186 123 + 107702431 ATGTTTCTACTTTTACATTTTGATACTCTGAAGTTTCCAATTTGGAATTTCA-ATGG-TTTTTAGCTATTTAAAGAGATCTATTTTGGTACTCTAAAATATTTGTTTTGCTTTAAAAGTCAGTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 318143 123 - 409142 ATTATTCTACTTTTACATTTTGATACTCTAAAGTTTCCAGTTTGGAATTTCA-ATGT-TTTTTAGCTATTTAAAGAGATCTATTTTGGTACTCTAAAATATTTGTTTTGCTTTAAAAGTCAGTTC i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27256764 124 - 28799539 ATGTTTTTACTTTTACATTTGGATACTCTGAAGTTTTCGATTTGGAATTTCA-ATAGTTTTTTAGCAATTTAAAGAGATCAATTTTGATACTCTAAAATATTTGTTTTGCTTTAAAAGTCAATTC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 78869 123 - 3620821 ATGTTTCTACTTTTACATTTGGATACTCTGAAGCTTTCGATTTGGAATTTCA-ATAG-TTTTTAGCAATTTAAAGAGATCAATTTTGATACTCTAAAATATTTGTTTTGCTTTAAAAGTCAATTC i cebCap1.NW_016107537v1 I 67064 I 10685 s tarSyr2.KE948426v1 9209 120 + 45822 -TGTTTCTACATTTATGTTTTGATGCCCTAAACTTTTCCACTC--AATTCCATATAC-TTGTTAAGAACTCTAAGTGGTAAATTTTGAAAGGCT-AAGTTTTCCCACTGTTTCAAAGACTTATTG i tarSyr2.KE948426v1 C 0 C 0 s otoGar3.GL873538 19649931 117 - 27850971 ATGCTTCTACTTTTATGTTCTG------TAAAgttcccaactcggaatctct-ttac-ttgttagggattcacagaggtgaattatgagattctacaatttttccaatgtttcaaatacttgttg i otoGar3.GL873538 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e calJac3.chr14 14812474 17338 + 108792865 I a score=44432.000000 s hg38.chrUn_KI270746v1 29235 8 + 66486 AAATTATG s panPan2.chr2A 89825709 8 + 114371477 AAATTATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 834938 8 - 998796 AAATTATG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47840322 8 + 94967081 AAATTATG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108540255 8 + 108979918 AAATTATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17676878 8 + 111193037 AAATTATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10542670 8 - 11597128 AAATTATG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5031759 8 - 5626091 AAATTATG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16511309 8 + 107702431 AAATTATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 318266 8 - 409142 AAATTATG i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27256888 8 - 28799539 GAAGTATG i saiBol1.JH378124 C 0 C 0 s tarSyr2.KE948426v1 9329 8 + 45822 GAATTCTG i tarSyr2.KE948426v1 C 0 n 0 s otoGar3.GL873538 19650048 8 - 27850971 gcattctg i otoGar3.GL873538 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e cebCap1.NW_016107537v1 78992 10685 - 3620821 I e calJac3.chr14 14812474 17338 + 108792865 I a score=5159.000000 s hg38.chrUn_KI270746v1 29243 1 + 66486 G s panPan2.chr2A 89825717 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 834946 1 - 998796 G i gorGor5.CYUI01015730v1 C 0 I 19488 s nomLeu3.chr14 47840330 1 + 94967081 G i nomLeu3.chr14 C 0 I 10297 s rheMac8.chr13 108540263 1 + 108979918 G i rheMac8.chr13 C 0 I 12302 s macFas5.chr13 17676886 1 + 111193037 G i macFas5.chr13 C 0 I 12366 s macNem1.NW_012014799v1 10542678 1 - 11597128 G i macNem1.NW_012014799v1 C 0 I 12291 s cerAty1.NW_012001187v1 5031767 1 - 5626091 G i cerAty1.NW_012001187v1 C 0 I 12581 s chlSab2.chr14 16511317 1 + 107702431 G i chlSab2.chr14 C 0 I 11927 s manLeu1.NW_012101154v1 318274 1 - 409142 G i manLeu1.NW_012101154v1 C 0 I 12714 s saiBol1.JH378124 27256896 1 - 28799539 G i saiBol1.JH378124 C 0 I 11467 s otoGar3.GL873538 19650056 1 - 27850971 a i otoGar3.GL873538 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e cebCap1.NW_016107537v1 78992 10685 - 3620821 I e calJac3.chr14 14812474 17338 + 108792865 I a score=6228.000000 s hg38.chrUn_KI270746v1 29244 1 + 66486 C s panPan2.chr2A 89825718 1 + 114371477 C i panPan2.chr2A C 0 I 12703 s gorGor5.CYUI01015730v1 854435 1 - 998796 c i gorGor5.CYUI01015730v1 I 19488 C 0 s nomLeu3.chr14 47850628 1 + 94967081 c i nomLeu3.chr14 I 10297 C 0 s rheMac8.chr13 108552566 1 + 108979918 c i rheMac8.chr13 I 12302 C 0 s macFas5.chr13 17689253 1 + 111193037 c i macFas5.chr13 I 12366 C 0 s macNem1.NW_012014799v1 10554970 1 - 11597128 c i macNem1.NW_012014799v1 I 12291 C 0 s cerAty1.NW_012001187v1 5044349 1 - 5626091 c i cerAty1.NW_012001187v1 I 12581 C 0 s chlSab2.chr14 16523245 1 + 107702431 c i chlSab2.chr14 I 11927 C 0 s manLeu1.NW_012101154v1 330989 1 - 409142 c i manLeu1.NW_012101154v1 I 12714 C 0 s saiBol1.JH378124 27268364 1 - 28799539 c i saiBol1.JH378124 I 11467 C 0 s cebCap1.NW_016107537v1 89677 1 - 3620821 c i cebCap1.NW_016107537v1 I 10685 C 0 s otoGar3.GL873538 19650057 1 - 27850971 t i otoGar3.GL873538 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e calJac3.chr14 14812474 17338 + 108792865 I a score=23771.000000 s hg38.chrUn_KI270746v1 29245 4 + 66486 CACt s gorGor5.CYUI01015730v1 854436 4 - 998796 cact i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47850629 4 + 94967081 cact i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108552567 4 + 108979918 cact i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689254 4 + 111193037 cact i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10554971 4 - 11597128 cact i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5044350 4 - 5626091 cact i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16523246 4 + 107702431 cact i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 330990 4 - 409142 cact i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27268365 4 - 28799539 cact i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 89678 4 - 3620821 cact i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19650058 4 - 27850971 catt i otoGar3.GL873538 C 0 I 16812 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e panPan2.chr2A 89825719 12703 + 114371477 I e calJac3.chr14 14812474 17338 + 108792865 I a score=460625.000000 s hg38.chrUn_KI270746v1 29249 102 + 66486 ttggtctcatatattgtgaggctggtttgttattaggggcataaatacttaggattgttatgttttgttgattaactgaaccttttactattgtgacatgac s gorGor5.CYUI01015730v1 854440 102 - 998796 ttggtctcatatattgtgaggctggtttgttattaggggcataaagacttaggattgttatgttttgttgattaactgaaccttttactattgtgacatgac i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47850633 102 + 94967081 ttggtctcatatattgtgaggctagttttttattaggggcgtaaagacttaggattgttatgttttgttgattaactgaaccttttactattgtgacatgac i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108552571 102 + 108979918 ttggtctcatatattgtgaagctggtttgttattaggtgcataaacacttaggattgttatgttttattgattaacttaaccttttactattgtgacatgac i rheMac8.chr13 C 0 I 2 s macFas5.chr13 17689258 102 + 111193037 ttggtctcatatattgtgaagctggtttgttattaggtgcataaacacttaggattgttatgttttgttgattaacttaaccttttactattgtgacatgac i macFas5.chr13 C 0 I 2 s macNem1.NW_012014799v1 10554975 102 - 11597128 ttggtctcatatattgtgaagctggtttgttattaggtgcataaacacttaggattgttatgttttgttgattaacttaaccttttactattgtgacatgac i macNem1.NW_012014799v1 C 0 I 2 s cerAty1.NW_012001187v1 5044354 102 - 5626091 ttggtctcatatattgtgaagctggtttgttattaggtgcataaacacttaggattgttaggttttgttgattaactgaaccttttactattgtgacatgac i cerAty1.NW_012001187v1 C 0 I 2 s chlSab2.chr14 16523250 102 + 107702431 ttggtctcatatattgtgaagctggtttgttattaggtgcataaacacttaagattgttaggttttgttgattaactgaaccttttactattgtgacatgac i chlSab2.chr14 C 0 I 2 s manLeu1.NW_012101154v1 330994 102 - 409142 ttggtctcatatattgtgaagccggtttgttattaggtgcataaacacttaggattgttatgttttgttgattaacttaaccttttactattgtgacatgac i manLeu1.NW_012101154v1 C 0 I 2 s saiBol1.JH378124 27268369 102 - 28799539 ttggcctcatacattttgaagctggcttgtttttaggggtataaacacttaagattgttatgttttcctcattaactgatccttttactattgtgacatgac i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 89682 102 - 3620821 ttggcctcatatattttgaagctggcttgtttttaggggtataaacacttaggattgttatgttttcctcattaactgatcctttaactattgcgacatgac i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e panPan2.chr2A 89825719 12703 + 114371477 I e calJac3.chr14 14812474 17338 + 108792865 I a score=144.000000 s hg38.chrUn_KI270746v1 29351 1 + 66486 a s gorGor5.CYUI01015730v1 854542 1 - 998796 c i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47850735 1 + 94967081 c i nomLeu3.chr14 C 0 I 1 s saiBol1.JH378124 27268471 1 - 28799539 c i saiBol1.JH378124 C 0 I 1 s cebCap1.NW_016107537v1 89784 1 - 3620821 c i cebCap1.NW_016107537v1 C 0 I 1 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e manLeu1.NW_012101154v1 331096 2 - 409142 I e chlSab2.chr14 16523352 2 + 107702431 I e cerAty1.NW_012001187v1 5044456 2 - 5626091 I e macNem1.NW_012014799v1 10555077 2 - 11597128 I e rheMac8.chr13 108552673 2 + 108979918 I e panPan2.chr2A 89825719 12703 + 114371477 I e calJac3.chr14 14812474 17338 + 108792865 I e macFas5.chr13 17689360 2 + 111193037 I a score=10010.000000 s hg38.chrUn_KI270746v1 29352 2 + 66486 tt s gorGor5.CYUI01015730v1 854543 2 - 998796 tt i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47850737 2 + 94967081 tt i nomLeu3.chr14 I 1 C 0 s rheMac8.chr13 108552675 2 + 108979918 tt i rheMac8.chr13 I 2 C 0 s macFas5.chr13 17689362 2 + 111193037 tt i macFas5.chr13 I 2 C 0 s macNem1.NW_012014799v1 10555079 2 - 11597128 tt i macNem1.NW_012014799v1 I 2 C 0 s cerAty1.NW_012001187v1 5044458 2 - 5626091 tt i cerAty1.NW_012001187v1 I 2 C 0 s chlSab2.chr14 16523354 2 + 107702431 tt i chlSab2.chr14 I 2 C 0 s manLeu1.NW_012101154v1 331098 2 - 409142 tt i manLeu1.NW_012101154v1 I 2 C 0 s saiBol1.JH378124 27268473 2 - 28799539 tt i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 89786 2 - 3620821 tt i cebCap1.NW_016107537v1 I 1 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e panPan2.chr2A 89825719 12703 + 114371477 I e calJac3.chr14 14812474 17338 + 108792865 I a score=6006.000000 s hg38.chrUn_KI270746v1 29354 1 + 66486 t s gorGor5.CYUI01015730v1 854545 1 - 998796 t i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47850739 1 + 94967081 t i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108552677 1 + 108979918 t i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689364 1 + 111193037 t i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555081 1 - 11597128 t i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5044460 1 - 5626091 t i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16523356 1 + 107702431 t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331100 1 - 409142 t i manLeu1.NW_012101154v1 C 0 C 0 s nasLar1.chr13 103942935 1 + 126811233 t i nasLar1.chr13 N 0 I 619 s saiBol1.JH378124 27268475 1 - 28799539 t i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 89788 1 - 3620821 t i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e panPan2.chr2A 89825719 12703 + 114371477 I e calJac3.chr14 14812474 17338 + 108792865 I a score=236204.000000 s hg38.chrUn_KI270746v1 29355 62 + 66486 gttatttattgctgg-aattttt------------------ttttttttgctatgaaatctactttgttattaatgcagcc s gorGor5.CYUI01015730v1 854546 58 - 998796 gttatttattgctgg-aattttt------------------tttt----gctatgaaatctactttggtattaatacagcc i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47850740 58 + 94967081 gttatttattgctgg-atttatt------------------tttt----gcgatgaaatctactttggtattaatacagcc i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108552678 71 + 108979918 gttatttattgctgg-tttttttgtttgtttgtttg-----tttt----gctatgagatctactttggtattaacacagcc i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17689365 71 + 111193037 gttatttattgctgg-tttttttgtttgtttgtttg-----tttt----gctatgatatctactttggtattaacacagcc i macFas5.chr13 C 0 I 1 s macNem1.NW_012014799v1 10555082 71 - 11597128 gttatttattgctgg-tttttttgtttgtttgtttg-----tttt----gctatgatatctactttggtattaacacagcc i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 5044461 73 - 5626091 gttatttattgctggttttttttgtttgtttgtttgt----tttt----gctatgaaatctactttggtattaacacagtc i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 16523357 77 + 107702431 gttatttattgctggctttttttgtttgtttgtttgtttgttttt----gctatgaaatctactttggtattaacacagcc i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 331101 75 - 409142 gttatttattgctgg-tttttttgtttgtttgtttgtttg-tttt----gctatgagatctactttggtattaacacagcc i manLeu1.NW_012101154v1 C 0 I 1 s saiBol1.JH378124 27268476 70 - 28799539 gttatttattgctgg-atttttttttttttttttt------tttt----gctatgcaatctactttggtattaatgcagcc i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 89789 62 - 3620821 gttatttattgctgg-a--------tttttttttt------cttt----gctatgaaatctactttggtattaatacagcc i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103942936 619 + 126811233 I e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e panPan2.chr2A 89825719 12703 + 114371477 I e calJac3.chr14 14812474 17338 + 108792865 I a score=1053492.000000 s hg38.chrUn_KI270746v1 29417 200 + 66486 actcctgctcagctgcctttggcaactgttagcatgtatctttttccatccttacaaccaatttgtgtctttacatttaaagtgcatttcttataggcagcctgcagttgggtcttgctttcttgctgagcctgacagtctgtattatagttgaggttcttagacaagtgtcatttataatgtgactattgatacagtta s panPan2.chr2A 89838422 200 + 114371477 actcctgctcagctgcctttggcaactgttagcatgtatctttttccatccttacaaccaatttgtgtctttacatttaaagtgcatttcttataggcagcctgtagttgggtcttgctttcttgctgagcctgacagtctgtattatagttgagattcttagacaagtgtcatttataatgtgattattgatatagtta i panPan2.chr2A I 12703 C 0 s gorGor5.CYUI01015730v1 854604 200 - 998796 actcctgctcagctgcctttggcaactgttagcatgtatctttttccatccttacaaccaatttgtgtctttacattgaaagtgcatttcttataggcagcctgtagttgggtcttgctttcttgatgagcctgacagtctgtattatagttgaggttcttagacaagtttcatttataatgtgattactgatatgtttg i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47850798 200 + 94967081 actcctgctcagctgcctttggcaactgttagcatgtatctttttccatccttacaaccaatttgtgtctttacatttcaagtgcatttcttataggcagcctgtagttgggtcttgctttcttgctgagcctgacagtctgtattatagttgaggttcttagacaagtgtcatttataatgtgattactgatatagtta i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108552750 197 + 108979918 actcctgctcagctgcccttggcaactgttagcatgtatctttttccatccttgtaacc-atttgtgtctttacatttaaagtgcatttcttataggcagcctgtagttgggtcttgctttcttactgagcctgacagtctgcatttgagttgaggttcttagacaagtgtcatttataatgtcattgacaata--gtta i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17689437 197 + 111193037 actcctgctcagctgcccttggcaactgttagcatgtatctttttccatccttgtaacc-atttgtgtctttacatttaaagtgcatttcttataggcagcctgtagttgggtcttgctttcttactgagcctgacagtctgcatttgagttgaggttcttagacaagtgtcatttataatgtcattgacaata--gtta i macFas5.chr13 I 1 C 0 s macNem1.NW_012014799v1 10555154 197 - 11597128 actcctgctcagctgcccttggcaactgttagcctgtatctttttccatccttgtaacc-atttgtgtctttacatttaaagtgcatttcttataggcagcctgtagttgggtcttgctttcttactgagcctgacagtctgcatttgagttgaggttcttagacaagtgtcatttataatgtcattgacaata--gtta i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 5044535 197 - 5626091 actcctgctcagctgcccttggcaactgttagcatgtatctttttccatccttgtaacc-atttgtgtctttacatttaaagtgcatttcttataggcagcctgtagttgggtcttgctttcttactgagcctgacagtctgcatttgagttgaggttcttagacaagtgtcatttataatgtcattgataata--gtta i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 16523435 197 + 107702431 actcctgctcagctgcccttggcaactgttagcatgtatgtttttccatccttgtaacc-atttgtgtctttacatttaaagtgcatttcttataggcagcctgtagttgggtcttgctttcttactgagcctgacagtctgcatttgagttgaggtttttagacaagtgtcatttataatgtcgttgataata--gtta i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 331177 197 - 409142 actcctgctcagctgcccttggcaactgttagcatgtatctttttccatccttgtaacc-atttgtgtctttacatttaaagtgcatttcttataggcagcctgtagttgggtcttgctttcttactgagcctgacagtctgcatttgagttgaggttcttagacaagtgtcatttataatgtcattgataatg--gtta i manLeu1.NW_012101154v1 I 1 C 0 s saiBol1.JH378124 27268546 194 - 28799539 actcccgctcacctgcctctgacaagtgttaacatgtatctttttccaaccttctaactaatttgtgtctttacatttaaagtgcatttcttataggcagcatgtagt------ttgctttcttattgagtctgacagtctgcatttgagttgagggttttagacaagtgtcatttatgatgtgattattgatatagtta i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 89851 200 - 3620821 actcccgctcagctgcctctgacaagtgttaacatgtatctttttccaaccttctaactaatttgtgtctttacatttaaagtgcatttcttataggcagcatgtagttgggtcttgctttcttactgagtctgacagtctgcatttgagttgaggtttttagacaagtgtcatttataacgtgattattgatatagttg i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103942936 619 + 126811233 I e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=10055.000000 s hg38.chrUn_KI270746v1 29617 2 + 66486 tg s panPan2.chr2A 89838622 2 + 114371477 tg i panPan2.chr2A C 0 C 0 s nomLeu3.chr14 47850998 2 + 94967081 tg i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108552947 2 + 108979918 tg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689634 2 + 111193037 tg i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555351 2 - 11597128 tg i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5044732 2 - 5626091 tg i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16523632 2 + 107702431 tg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331374 2 - 409142 tg i manLeu1.NW_012101154v1 C 0 C 0 s rhiRox1.KN296402v1 645132 1 - 657959 -g i rhiRox1.KN296402v1 N 0 I 39 s saiBol1.JH378124 27268740 2 - 28799539 cg i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90051 2 - 3620821 tg i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103942936 619 + 126811233 I e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I e gorGor5.CYUI01015730v1 854804 0 - 998796 C a score=177291.000000 s hg38.chrUn_KI270746v1 29619 34 + 66486 tttgtctagta----gctgtttgattgctactagtccc s panPan2.chr2A 89838624 34 + 114371477 tttgtctagta----gctgtttgattgctattagtccc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 854804 32 - 998796 -ttgtct-gta----gctgtttgattgctattaatccc i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851000 34 + 94967081 tttgtctagta----gctgtttgattgctattagtccc i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108552949 34 + 108979918 tttgtctagta----gctgtttgattgctattagtccc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689636 34 + 111193037 tttgtctagta----gctgtttgattgctattagtccc i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555353 34 - 11597128 tttgtctagta----gctgtttgattgctattagtccc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5044734 34 - 5626091 tttgtctagta----gctgtttgattgctattagtccc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16523634 34 + 107702431 tttgtctagta----gctgtttgattgctattagtccc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331376 34 - 409142 tttgtctagta----gctgtttgattgctattagtccc i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27268742 38 - 28799539 tttttctgtcatcatgctgtttgattgccattagtccc i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90053 38 - 3620821 tttttctgtcatgatgctgtttgattgctattagtccc i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103942936 619 + 126811233 I e rhiRox1.KN296402v1 645133 39 - 657959 I e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=7098.000000 s hg38.chrUn_KI270746v1 29653 1 + 66486 a s panPan2.chr2A 89838658 1 + 114371477 a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 854836 1 - 998796 a i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851034 1 + 94967081 a i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108552983 1 + 108979918 a i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689670 1 + 111193037 a i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555387 1 - 11597128 a i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5044768 1 - 5626091 a i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16523668 1 + 107702431 a i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331410 1 - 409142 a i manLeu1.NW_012101154v1 C 0 C 0 s rhiRox1.KN296402v1 645172 1 - 657959 a i rhiRox1.KN296402v1 I 39 I 103 s saiBol1.JH378124 27268780 1 - 28799539 a i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90091 1 - 3620821 a i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103942936 619 + 126811233 I e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=494191.000000 s hg38.chrUn_KI270746v1 29654 101 + 66486 actgttctttgttcccc-ttcttttcctgctttcttttagattagtcaactgttttttacgattcaattttatatatatttttgggtttattagcgataact s panPan2.chr2A 89838659 101 + 114371477 tctgttctttgttcccc-ttcttttgctgctttcttttagatttgtcaactgttttttatgattcaattttgtatatatttttgggtttgttagcaataact i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 854837 101 - 998796 actgttctctgttcccc-ttcttttcctgctttcctttagattagtcaactgttttttatgattcaattttatatatatttttgggtttattagcgataact i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851035 101 + 94967081 actgttctttgttcccc-ttcttttcctgctttcttttagattagtcaactgttttttatgattcaattttatatatatttttgggtttattagaaataact i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108552984 96 + 108979918 gctgttctttgttcccc-ttctttttctgctttctt-----ttagtcaactattttttatgattcaattttgcatatattttggggtttattagggataact i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689671 96 + 111193037 gctgttctttgttcccc-ttctttttctgctttctt-----ttagtcaactattttttatgattcaattttgcatatattttggggtttattagggataact i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555388 96 - 11597128 gctgttctttgttcccc-ttctttttctgctttctt-----ttagtcaactattttttatgattcaattttgcatatattttggggtttattagggataact i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5044769 96 - 5626091 gctgttctttgttcccc-ttctttttctgctttctt-----ttagtcaactatttattatgattcaattttgcatatattttggagtttattagggataact i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16523669 96 + 107702431 actgttctttgttcccc-ttctttttctgctttctt-----ttagtcaactattttttatgattcaattttgcatatatttttgggtttattagggataact i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331411 102 - 409142 gctgttctttgttcccctttctttttctgctttcttttagattagtcaactattttttatgattcaattttgcatatatttttgggttgattagggataact i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27268781 99 - 28799539 gctgttatttgttcccc-ttctttttctcctttcttttagatcagtcagctatattttatgattcaatttt--atatatttttgggtttattagagataact i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90092 99 - 3620821 gctgttatttgttcccc-ttctttttctcctttcttttagatgagtcagctatattttatgattcaatttt--atatatttttgggtttattagagataact i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103942936 619 + 126811233 I e rhiRox1.KN296402v1 645173 103 - 657959 I e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=29094.000000 s hg38.chrUn_KI270746v1 29755 4 + 66486 gttt s panPan2.chr2A 89838760 4 + 114371477 gttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 854938 4 - 998796 gttt i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851136 4 + 94967081 gttt i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108553080 4 + 108979918 gttt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689767 4 + 111193037 gttt i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555484 4 - 11597128 gttt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5044865 4 - 5626091 gttt i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16523765 4 + 107702431 gttt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331513 4 - 409142 gttt i manLeu1.NW_012101154v1 C 0 C 0 s rhiRox1.KN296402v1 645276 4 - 657959 gttt i rhiRox1.KN296402v1 I 103 I 913 s saiBol1.JH378124 27268880 4 - 28799539 gttt i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90191 4 - 3620821 gttt i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103942936 619 + 126811233 I e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=908944.000000 s hg38.chrUn_KI270746v1 29759 169 + 66486 tgctatcttagtg-----tttaggatttttagtatataattttaacttatcacagttcaccttc-agtaatattatgcatcatagatggtat-aaaaa-ttacaatgatacattttcatttttttctgtcccagACACTTCCTTCCTGAATCTGTGAGATTATGGTTTGTATTAAGG s panPan2.chr2A 89838764 170 + 114371477 tgctatcttagtg-----tttaggatttttagtatataattttaacttatcacagttcaccttc-agtaatattatacatcatagatggtat-aaaaaatgacaatcatacattttcatttttttctgtcccagACACTTCcttcctgaatctgtgggattatggtttgtattaagg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 854942 169 - 998796 tgctatcttagtg-----tttaggatttttagtatataattttaacttatcacagttcaccttc-agtaatattatacatc-tagatggtat-aaaaaatgacaatgatacattttcatttttttctgtcccagACACTTCCTTCCTGAATCTGTGGGATTATGGTTTGTGTTAAGG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851140 170 + 94967081 tgctatcttagtg-----tttaggatttttagtatataattttaacttatcacagttcaccttc-agtaatattatacatcatagatggtat-aaaaaatgacaatgatacattttcatttttttctgtcccagACACTTCcttcctgaatctgtgggattatggttggtattaagg i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108553084 170 + 108979918 tgctatattaatg-----tttaggatttttagtatataattttaacttatcacagtccaccttc-agtaatactatacatcatagatggtataaaaaaatgacaatgatacattttcagttttttctgtcccagACACTTCctccctgaatctgtgggattatggtttgtattaag- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689771 170 + 111193037 tgctatattaatg-----tttaggatttttagtatataattttaacttatcacagtccaccttc-agtaatactatacatcatagatggtataaaaaaatgacaatgacacattttcagttttttctgtcccagACACTTCctccctgaatctgtgggattatggtttgtattaag- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555488 170 - 11597128 tgctatattaatg-----tttaggatttttagtatataattttaacttatcacagtccaccttc-agtaatactatacatcatagatggtataaaaaaatgacaatgatacattttcagttttttctgtcccagACACTTCctccctgaatctgtgggattatggtttgtattaag- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5044869 169 - 5626091 tgctatattaatg-----tttaggatttttagtatataattttaacttatcacagtccaccttc-agtaatactatacatcatagatggtat-aaaaaatgacaatgatacattttcagttttttctgtcccagATACTTCcttcctgaatctgtggggttatggtttgtattaag- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16523769 169 + 107702431 tgctatattaatg-----tttaggatttttagtatataattttaacttatcacagtccaccttc-agtaatactatacatcatagatggtat-aaaaaatgacaatgatacattttcagttttttctgtcccagACACTTCcttcctgaatctgtggggttatggtttgtattaag- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331517 170 - 409142 tgctatattaatg-----tttaggatttttattatataattttaaattatcacagtccaccttc-agtagtactatacatcatagatggtataaaaaaatgacaatgatacattttcagttttttctgtcccagACACTTCctccctgaatctgtgggattatggtttgtattaag- i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27268884 172 - 28799539 tgctatcttaatgtttactttaggatttttagtatataatttcaacttatcacagtccaccttcaaataa---tatacatcatagatggtat-aaaagatgacaatgatacactttcatttttttcTGTCTCAGACACTTCTttcctgaatctgtgggattatggtttgtattaag- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90195 175 - 3620821 tgctatcttaatgtttactttaggatttttagtatataattttaacttatcacagtccaccttcaaataatattatacatcatagatggtat-aaaagatgacaatgatacactttcatttttttcTGTCCCGGATACTTCTttcctgaatctgtgggattatggtttgtattaaa- i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103942936 619 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chrUn 62278068 0 - 72422247 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=4500.000000 s hg38.chrUn_KI270746v1 29928 1 + 66486 G s ponAbe2.chr2a_random 11209259 1 + 13868332 g i ponAbe2.chr2a_random I 36115 I 820 s rheMac8.chr13 108553254 1 + 108979918 g i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689941 1 + 111193037 g i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555658 1 - 11597128 g i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045038 1 - 5626091 g i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16523938 1 + 107702431 g i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331687 1 - 409142 g i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27269056 1 - 28799539 g i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90370 1 - 3620821 g i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103942936 619 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e panPan2.chr2A 89838934 0 + 114371477 C e calJac3.chr14 14812474 17338 + 108792865 I e nomLeu3.chr14 47851310 0 + 94967081 C e gorGor5.CYUI01015730v1 855111 0 - 998796 C a score=126780.000000 s hg38.chrUn_KI270746v1 29929 25 + 66486 TTAGAATATTTTGGGCCAttttttc s panPan2.chr2A 89838934 25 + 114371477 ttagaatatttttggccattttctc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855111 24 - 998796 TTA-AATATTTTTGGCCATTTTTTC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851310 25 + 94967081 ttagaatatttttggccatgttttc i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108553255 25 + 108979918 ttagaatattttcggccattttttc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689942 25 + 111193037 ttagaatattttcggccattttttc i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555659 25 - 11597128 ttagaatattttcggccattttttc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045039 25 - 5626091 ttagaatatttttggccattttttc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16523939 25 + 107702431 ttagaatattttcggccattttttc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331688 25 - 409142 ttagaatattttcggccattttttc i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27269057 25 - 28799539 cgagaacatttttgtccattttttc i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90371 25 - 3620821 ttaaaacatttttgtccattttttc i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103942936 619 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=5362.000000 s hg38.chrUn_KI270746v1 29954 1 + 66486 t s panPan2.chr2A 89838959 1 + 114371477 t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855135 1 - 998796 T i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851335 1 + 94967081 t i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108553280 1 + 108979918 t i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17689967 1 + 111193037 t i macFas5.chr13 C 0 I 1 s macNem1.NW_012014799v1 10555684 1 - 11597128 t i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 5045064 1 - 5626091 t i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 16523964 1 + 107702431 t i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 331713 1 - 409142 t i manLeu1.NW_012101154v1 C 0 I 1 s nasLar1.chr13 103943555 1 + 126811233 c i nasLar1.chr13 I 619 I 203 s rhiBie1.NW_016815150v1 78 1 + 5816 c i rhiBie1.NW_016815150v1 N 0 I 208 s saiBol1.JH378124 27269082 1 - 28799539 t i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90396 1 - 3620821 t i cebCap1.NW_016107537v1 C 0 C 0 e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=31830.000000 s hg38.chrUn_KI270746v1 29955 10 + 66486 ttat-tttttt s panPan2.chr2A 89838960 10 + 114371477 ttaa-tttttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855136 10 - 998796 TTAA-TTTTTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851336 10 + 94967081 ttaa-tttttt i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108553282 9 + 108979918 ttaa-ttttt- i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17689969 9 + 111193037 ttaa-ttttt- i macFas5.chr13 I 1 C 0 s macNem1.NW_012014799v1 10555686 9 - 11597128 ttaa-ttttt- i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 5045066 9 - 5626091 ttaa-ttttt- i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 16523966 9 + 107702431 ttaa-ttttt- i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 331715 10 - 409142 ttaatttttt- i manLeu1.NW_012101154v1 I 1 C 0 s saiBol1.JH378124 27269083 9 - 28799539 ttaa-ttttt- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90397 9 - 3620821 ttat-ttttt- i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016815150v1 79 208 + 5816 I e nasLar1.chr13 103943556 203 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e papAnu3.chr13 104236816 29378 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=12744.000000 s hg38.chrUn_KI270746v1 29965 2 + 66486 tt s panPan2.chr2A 89838970 2 + 114371477 tt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855146 2 - 998796 TT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851346 2 + 94967081 tt i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108553291 2 + 108979918 tt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689978 2 + 111193037 tt i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555695 2 - 11597128 tt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045075 2 - 5626091 tt i cerAty1.NW_012001187v1 C 0 C 0 s papAnu3.chr13 104266194 1 + 128036923 -t i papAnu3.chr13 I 29378 I 178 s chlSab2.chr14 16523975 2 + 107702431 tt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331725 2 - 409142 tt i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27269092 2 - 28799539 tt i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90406 2 - 3620821 tt i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016815150v1 79 208 + 5816 I e nasLar1.chr13 103943556 203 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=519693.000000 s hg38.chrUn_KI270746v1 29967 101 + 66486 tctgtctcttc-ttttttatttggggagttatc--tgtgagctgcttgaaagtttcttgcagtttattgtgtcaaatttaggaat-ttttcctttgttatctcta s panPan2.chr2A 89838972 100 + 114371477 -ctgtctcttc-ttttttatttggggagttatc--tattagctgcttgaaagtttcttgcagtttattgTGTCAAATTTAGGAAT-TTTTCCTTTGTTATCTTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855148 98 - 998796 -CTGTCTCTTC-TTTTTTATTT-GGGAGTTATC--TATTAGCTGCTTGAAAGTTTCTTGCAGTTTATTGTGTCAAATTTAGGAA--TTTTCCTTTGTTATCTTTA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851348 100 + 94967081 -ctgtctcttc-ttttttatttggggagttacc--tattagctgcttgaaagtttcttgcagtttatcgtgtcaaatttaggaat-ttttcctttgttatctcta i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108553293 103 + 108979918 tctatctcttctttttttatttagggagttatt--gattagctgcttgaaagtttctcacagtttattgtgtcaaatttaggaatattttcctttgtcatctcta i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17689980 103 + 111193037 tctatctcttctttttttatttagggagttatt--gattagctgcttgaaagtttctcacagtttattgTGTCAAATTTAGGAATATTTTCCTTTGTCATCTCTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555697 103 - 11597128 tctatatcttctttttttatttagggagttatt--gattagctgcttgaaagtttctcacagtttattgtgtcaaatttaggaatattttcctttgtcatctcta i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045077 103 - 5626091 tctatctcttctttttttattcagggagttatc--gattagctgcttgaaagtttctcacagtttattgtgtcaaatttaggaatattttcctttgtcatctcta i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16523977 103 + 107702431 tctatctcttctttttttatttagggagttatc--gattagctgcttgaaagtttctcacagtttattgTGTCAAATTTAGGAATATTTTCCTTTGTCGTCTCTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331727 103 - 409142 tctatctcttctttttttatttaaggagttatc--gattagctgcttgaaagtttctcacagtttattgtgtcaaatttaggaatattttcctttgtcatctcta i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27269094 104 - 28799539 tctgtcccttc-ttttttatttggggagttatctatattagctgcttgaaagtttctcacagtttatcgtgtcaaatttaggaatcttttcctttgttatcctta i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90408 104 - 3620821 tctgtcccttc-ttttttatttggggagttatctatattagctgcttgaaagtttctcacagtttatcatgtcaaatttaggaatcttttcctttgttatcccta i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016815150v1 79 208 + 5816 I e nasLar1.chr13 103943556 203 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e papAnu3.chr13 104266195 178 + 128036923 I e tarSyr2.KE948426v1 9337 0 + 45822 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=373371.000000 s hg38.chrUn_KI270746v1 30068 75 + 66486 atttgtgtttatttccatccactatagttt--ttacttctgaca-----------------atgtaa----tttgcatctctgcaagtatg--gttcctt s panPan2.chr2A 89839072 72 + 114371477 ATTTGTGTTTATTTCCATCCACTATAGTTT--TTACTTCTGACA-----------------ATGTAA----TTTGCGTCTCTACAAGTACG--GTT---T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855246 73 - 998796 ATTTGTGTTTATTTCCATCCACTATAGTTT--TTACTTCTGACA-----------------ATGTAA----TTTGCGTCTCTACAAGTATG--GTT--TT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851448 68 + 94967081 atttgtgtttatttccatccactatagttt--ttacttctgaca-----------------atgtaa----tttgcatctctacaagt------tt---t i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108553396 72 + 108979918 atttgtgtttatttccatccactatagttt--ttacttctgaca-----------------atgtaa----tttgcatctccacaagtatg--gtc---t i rheMac8.chr13 C 0 I 2 s macFas5.chr13 17690083 72 + 111193037 ATTTGTGTTTATTTCCATCCACTATAGTTT--TTACTTCTGACA-----------------ATGTAA----TTTGCATCTCCACAAGTATG--GTC---T i macFas5.chr13 C 0 I 2 s macNem1.NW_012014799v1 10555800 72 - 11597128 atttgtgtttatttccatccactatagttt--ttacttctgaca-----------------atgtaa----tttgcatctccacaagtatg--gtc---t i macNem1.NW_012014799v1 C 0 I 2 s cerAty1.NW_012001187v1 5045180 72 - 5626091 atttgtgtttatttccatccactatagttt--ttacttctgaca-----------------atgtaa----tttgcatctccacaagtatg--atc---t i cerAty1.NW_012001187v1 C 0 I 2 s chlSab2.chr14 16524080 72 + 107702431 ATTTGTGTTTATTTCCATCCACTATAGTTT--TTACTTCTGACA-----------------ATGTAA----TTTGCATCTCCACAAGTATG--GTC---T i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 331830 72 - 409142 atttgtgtttatttccatccactatagttt--ttacttctgaca-----------------atgtaa----tttgcatctccacaagtatg--gtc---t i manLeu1.NW_012101154v1 C 0 I 4 s saiBol1.JH378124 27269198 72 - 28799539 atttgtctttatttccatccactgtagttt--ttacctctgaaa-----------------atgtaa----tttgtgtctctacaaatatg--ggt---t i saiBol1.JH378124 C 0 I 2 s cebCap1.NW_016107537v1 90512 74 - 3620821 atttgtctttatttccatccactgtagttt--ttacctctgaaa-----------------atgtaa----tttgcgtctctacaaatatgatggt---t i cebCap1.NW_016107537v1 C 0 I 3 s tarSyr2.ABRT02374264v1 252 92 - 6859 atttttttttagttctatctactatggcttcatgtgttttgaagttatcttgttaggaggtatgtaaatatttaggactgctactgttatg--t------ i tarSyr2.ABRT02374264v1 n 0 C 0 e rhiBie1.NW_016815150v1 79 208 + 5816 I e nasLar1.chr13 103943556 203 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e papAnu3.chr13 104266195 178 + 128036923 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=7017.000000 s hg38.chrUn_KI270746v1 30143 2 + 66486 tt s panPan2.chr2A 89839144 2 + 114371477 TT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855319 2 - 998796 TT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851516 2 + 94967081 tt i nomLeu3.chr14 C 0 I 2 s rheMac8.chr13 108553470 1 + 108979918 -T i rheMac8.chr13 I 2 C 0 s macFas5.chr13 17690157 1 + 111193037 -T i macFas5.chr13 I 2 C 0 s macNem1.NW_012014799v1 10555874 1 - 11597128 -T i macNem1.NW_012014799v1 I 2 C 0 s cerAty1.NW_012001187v1 5045254 1 - 5626091 -t i cerAty1.NW_012001187v1 I 2 C 0 s papAnu3.chr13 104266373 1 + 128036923 -t i papAnu3.chr13 I 178 I 20 s manLeu1.NW_012101154v1 331906 1 - 409142 -t i manLeu1.NW_012101154v1 I 4 I 1 s saiBol1.JH378124 27269272 2 - 28799539 tt i saiBol1.JH378124 I 2 C 0 s cebCap1.NW_016107537v1 90589 2 - 3620821 tt i cebCap1.NW_016107537v1 I 3 C 0 s tarSyr2.ABRT02374264v1 344 2 - 6859 ct i tarSyr2.ABRT02374264v1 C 0 C 0 e rhiBie1.NW_016815150v1 79 208 + 5816 I e nasLar1.chr13 103943556 203 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e otoGar3.GL873538 19650062 16812 - 27850971 I e chlSab2.chr14 16524152 1 + 107702431 I e calJac3.chr14 14812474 17338 + 108792865 I a score=-20980.000000 s hg38.chrUn_KI270746v1 30145 19 + 66486 ttttttTTTT---------AAAAAAAAA-- s panPan2.chr2A 89839146 18 + 114371477 TTTTTTTTTT---------AAGAAAAA--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855321 18 - 998796 GTTTTTTTTT---------TAAAAAAA--- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851520 15 + 94967081 tttttttttt---------aaaaa------ i nomLeu3.chr14 I 2 C 0 s rheMac8.chr13 108553471 19 + 108979918 --------TTaaaaaaaaaaaaaaaaa--- i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17690158 16 + 111193037 --------TT---AAAAAAAAAAAAAA--- i macFas5.chr13 C 0 I 1 s macNem1.NW_012014799v1 10555875 16 - 11597128 --------TT---AAAAAAAAAAAAAA--- i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 5045255 19 - 5626091 --------ttttttttttaaaaaaaaa--- i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 16524153 19 + 107702431 -----TTTTT---AAAAAAAAAAAAAA--- i chlSab2.chr14 I 1 I 1 s manLeu1.NW_012101154v1 331908 15 - 409142 tttttttttt------------aaaaa--- i manLeu1.NW_012101154v1 I 1 I 1 s saiBol1.JH378124 27269274 5 - 28799539 -------ttt---------aa--------- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90591 5 - 3620821 -------ttt---------aa--------- i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.ABRT02374264v1 346 19 - 6859 -tttttattc---------atgaagaa-at i tarSyr2.ABRT02374264v1 C 0 C 0 e rhiBie1.NW_016815150v1 79 208 + 5816 I e nasLar1.chr13 103943556 203 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e papAnu3.chr13 104266374 20 + 128036923 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=5604.000000 s hg38.chrUn_KI270746v1 30164 2 + 66486 AA s rheMac8.chr13 108553491 1 + 108979918 -A i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17690175 1 + 111193037 -A i macFas5.chr13 I 1 C 0 s macNem1.NW_012014799v1 10555892 1 - 11597128 -A i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 5045275 1 - 5626091 -a i cerAty1.NW_012001187v1 I 1 C 0 s papAnu3.chr13 104266394 1 + 128036923 -a i papAnu3.chr13 I 20 I 601 s chlSab2.chr14 16524173 1 + 107702431 -A i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 331924 1 - 409142 -a i manLeu1.NW_012101154v1 I 1 C 0 s nasLar1.chr13 103943759 1 + 126811233 -A i nasLar1.chr13 I 203 I 598 s rhiBie1.NW_016815150v1 287 1 + 5816 -A i rhiBie1.NW_016815150v1 I 208 I 590 s saiBol1.JH378124 27269279 2 - 28799539 ta i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90596 2 - 3620821 ta i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.ABRT02374264v1 365 2 - 6859 ga i tarSyr2.ABRT02374264v1 C 0 I 11 e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e otoGar3.GL873538 19650062 16812 - 27850971 I e panPan2.chr2A 89839164 0 + 114371477 C e calJac3.chr14 14812474 17338 + 108792865 I e nomLeu3.chr14 47851535 0 + 94967081 C e gorGor5.CYUI01015730v1 855339 0 - 998796 C a score=106804.000000 s hg38.chrUn_KI270746v1 30166 21 + 66486 CCTTCCCTGCTTACACTTATT s panPan2.chr2A 89839164 21 + 114371477 CCTTCCCTGCCTCCACTTATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855339 21 - 998796 CCTTCCCTGCCTCCACTTATT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851535 21 + 94967081 ccttccctgcctccacttatt i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108553492 21 + 108979918 CCTTCCCTGCCTCCACTTACT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17690176 21 + 111193037 CCTTCCCTGCCTCCACTTACT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555893 21 - 11597128 CCTTCCCTGCCTCCACTTACT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045276 21 - 5626091 ccttccctgactccacttact i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16524174 21 + 107702431 CCTTCCCTGCCTCCACTTACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331925 21 - 409142 ccttccatgtctctacttact i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27269281 21 - 28799539 gcttccatgccttcacttaTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90598 21 - 3620821 gcttccatgccttcacttaTT i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016815150v1 288 590 + 5816 I e nasLar1.chr13 103943760 598 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e papAnu3.chr13 104266395 601 + 128036923 I e tarSyr2.ABRT02374264v1 367 11 - 6859 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=6228.000000 s hg38.chrUn_KI270746v1 30187 1 + 66486 G s panPan2.chr2A 89839185 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855360 1 - 998796 A i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851556 1 + 94967081 g i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108553513 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17690197 1 + 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555914 1 - 11597128 G i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045297 1 - 5626091 g i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16524195 1 + 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331946 1 - 409142 g i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27269302 1 - 28799539 G i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90619 1 - 3620821 G i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.ABRT02374264v1 378 1 - 6859 g i tarSyr2.ABRT02374264v1 I 11 n 11 e rhiBie1.NW_016815150v1 288 590 + 5816 I e nasLar1.chr13 103943760 598 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e papAnu3.chr13 104266395 601 + 128036923 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=2644915.000000 s hg38.chrUn_KI270746v1 30188 496 + 66486 TCTTGAGTTTTATTTGGAGTACAGAGATTTACTT------AAAATCTTTCCATGCTTGCTtttagatttggggtaattcctcactcctgaggcaagacctttctgaatattcattgtcctgt---------gaagtatgtgg-tattttggcctggctcatgggaatggaccctcttccagtcattgtgtgaaccccagacatagtttctgctaattttctttaact--tttt------------------------------------------------ttaaattttattttccattgttcttaggcagtttcctagcacacaagcacttttcattactccact-aaatacccaagagggaatctctgcacacctccaggatttgtttcctgtactgcttttttctctccagttttctgtcctgtgatctctatctgctttggttttcctagcctctcagcttcatcaccccagctctatgtcagattttctccctttttcatggcctcgaacctctgttaaaactctgtcaaaagagctgggacatttgtaatgcctgc s panPan2.chr2A 89839186 498 + 114371477 TCTTGAGTTTTATTTGGAGTACAGAGATTTACTT------ATACTCTTTCCATTCTTGCTGttagatttggggtaattcctcactcctgaggcaagacctttctgaatattcattgtcctgt---------taagtatgtgg-tattttggcctggctcatgggaatggaccctcttccagtcattgtgtgaaccccagacatagtttctgctaattttctttaaccactttt------------------------------------------------taaaattttattttccattgttcttaggaagtttcctagcatgcaagcacttttcattactccact-aaatacccaagagggaatctctgcacatctccaggatttgtttcctttactgcttttttctctccagttttctgtcctgtgatctctatatgctttggttttactagcctctcagcttcatcaccccagctcaatgtcagattttctccctttgtcatggcctcaaacctctgtcaaaactctgccaaaagagctgggacatttgtaaggcctgc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855361 495 - 998796 TCTTGAGTTTTATTTGGAGTACAGAGATTTACTT------ATA-TCTTTCCATTCTTGCTtttagatttggggtaattcctcactcctgaggcaagacctttctgagtattcattgtcctgt---------gaagtatgtgg-tattttggcctggctcatgggaatggaccctcttccagtcattgtgtgaaccccagacatagtttctgctaattttctttaacctttttt------------------------------------------------tttaatttttttttccattgttcttaggaagtttcctagcacgcaagcacttttcattactccact-aaatacccaagagggaatctctgcacatctccaggatttgtttcct-tactgcttttttctctccagttttctgtcctgtgatctctatatgctttggttttactagcctctcagcttcatcaccccagctctatgtcagattttctccctttgtcatggcctcgaacctctgtcaaaactctg-caaaagagctgggacatttgtaaggcctgc i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47851557 495 + 94967081 tcTTGAGTTTTATTTGGAGTACAGAGATTTACTT------ATAATCTTTCCATTCTTGCTtttagatttggggtaattcctcactcctgaggcaagacctttctgaatattgattgtcctgt---------gaagtatgtgg-tattttggcctggctcatgggaatggaccctcttccagtcattgtgtgaaccctagacatagtttctgctaa-----tttaactgtttttt----------------------------------------------gttttgttttattttccgttgttcttaggaagtttcctagcacacaagcacttttcactactccact-aaatacccaagagggaatctctgtacatctccaggatttgtttcctgtactgcttttttctctccagttttctgtcctgtgatctctatctgcttgggttttactagcctctcagcttcatcaccccagctctgtgtcagattttctccctttgtcgtggccttgaacctctgtcaaaactctgtcaaaagagctgggacatttgtaaggcatgc i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108553514 508 + 108979918 tcttgagttttatttggagtacagagatttactt------ataatctttccattcttgcttttagatttgtggtaattcctcactcctgaggcaagacctttctgaatattcattgtcatgtgaagcatgagaagtatgagg-tattttggcctggtgcatgggaatggaccctcttccagtcattgtgtgaaccccaggcatagtttctgctgattttctttaactgtttctt-----------------------------------------------ttaaattttattttccactgttcttaggaagtttcctagcacacaagcacttttcgttactccact-aaatacccaagagggaatctctgcacatctccaggatttgtttcctgaactgctttcttctctccagttttcagtcctgtgatctctatctgctttggttttactagcctctcagcttcataaccccagctctatgtcagattttctccctttgtcatggccttgaacctctgtcaaaactctgtcaaaagagctgggacaattgtaaggcctgc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17690198 508 + 111193037 TCTTGAGTTTTATTTGGAGTACAGAGATTTACTT------ATAATCTTTCCATTCTTGCTtttagatttggggtaattcctcactcctgaggcaagacctttctgaatattcattgtcatgtgaagcatgagaagtatgagg-tattttggcctggcgcatgggaatggaccctcttccagtcattgtgtgaaccccaggcatagtttctgctgattttctttaactgtttctt-----------------------------------------------ttaaattttattttccactgttcttaggaagtttcctagcacacaagcacttttcgttactccact-aaatacccaagagggaatctctgcacgtctccaggatttgtgtcctgtactgctttcttctctccatttttcagtcctgtgatctctatctgctttggttttactagcctctcagcttcataaccccagctctatgtcagattttctccctttgtcatggccttgaacctctgtcaaaactctgtcaaaagagctgggacaattgtaaggcctgc i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10555915 508 - 11597128 TCTTGAGTTTTATTTGGAGTACAGAGATTTACTT------ATAATCTTTCCATTCTTGCTtttagatttggggtaattcctcactcctgaggcaagacctttctgaatattcattgtcatgtgaagcatgagaagtatgagg-tattttggcctggcgcatgggaatggaccctcttccagtcattgtgtgaaccccaggcatagtttctgctgattttctttaactgtttctt-----------------------------------------------ttaaattttattttccactgttcttaggaagtttcctagcacacaagcacttttcgttactccact-aaatacccaagagggaatctctgcacgtctccaggatttgtgtcctgtactgctttcttctctccatttttcagtcctgtgatctctatctgctttggttttactagcctctcagcttcataaccccagctctatgtcagattttctccctttgtcatggccttgaacctctgtcaaaactctgtcaaaagagctgggacaattgtaaggcctgc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045298 508 - 5626091 tcttgaGTTTTATTTGGAGTACAGAGATTTACTT------ATAATCTTTCCATTCTTGCTtttagatttggggtaattcctcactcctgaggcaagacctttctgaatattcattgtcatgtgaagtatgagaagtatgagg-tattttggcctggcgcatgggaatggactctcttccagtcattgtgtgaaccccaggcatagtttctgctgattttctttaactgtttctt-----------------------------------------------ttaaattttattttccactgttcttaggaagtttcctagcacacaagcatttttcgttactccact-aaatacccaagagggaatctctgcacatctccaggatttgtttcctgtactgctttattctctccagttttcagtcctgtgatctctatctgctttggttttactagcctctcagcttcataaccccagctctatgtcagattttctccctttgtcatggccttgaacctctgtcaaaactctgtcaaaagagctgggacaattgtaaggcctgc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16524196 499 + 107702431 TCTTGAGTTTTATTTGGAGTACAGAGATTTACTT------ATAATCTTTCCAATCTTGCTtttagatttggggtaattcctcactcctgaggcaagacctttctgaatattcattgtcatgt---------gaagtatgagg-tgttttggcctggcgcatgggagtggaccctcttccagtcattgtgtgaaccccaggcatagtttctgctgattttctttaactgtttctt-----------------------------------------------ttaaattttattttccactgttcttaggaagtttcctagcacacaagcacttttcgttactccact-aaatacccaagagggaatctctgcacatctccaggatttgtttcctgtactgctttattctctccagttttctgtcctgtgatctctatttgctttggttttactagcctctcagcttcataaccccagctctatgtcagattttctccctttgtcatggccttgaacctctgtcaaaactctgtcaaaagagctgggacaattgtaaggcctgc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 331947 499 - 409142 tcttgaGTTTTATTTGGAGTACAGAGATTTGCTT------ATAATCTTTCCATTCTTGCTtttagatttggggtaattcctcactcctgaggcaagacctttctgaatattcattgtcatgt---------gaagtatgagg-tattttggcctggtgcatgggaatggaccctcttccagtcattgtgtgaaccccaggcatagtttctgctgattttctttaactgtttctt-----------------------------------------------ttaaattttattttccactg-tcttaggaagtttcctagcacacaagcacttttcgttactccactaaaatacccaagagggaatctctgcgcatctccaggatttgtttcctgtactgctttattctctccagttttcagtcctgtgatctctatctgctttgattttactagcctctcagcttcataaccccagctctatgtcagattttctccctttgtcatggccttgaacctctgtcaaaactctgtcaaaagagctgggacaattgtaaggcctgc i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27269303 493 - 28799539 TCTTGAGTTTTATTTGGAGTACAGCAATTTACTT---AAGATAATCTTTCCATTTTTGCTtttagatttggggtaattcctcacttctgaggcaagacctttctgattattcattgtcctgt---------gaagtatgagg-ttttttggcctggctcatgggaatggaccctcttccaggcatggtgtgaaccccaggcatagtttctgataatcttctttaagca--------------------------------------------------------gttttttttccctattgttctgaggaagtttcctagcacaaaaggacttttcattactctact-gaatactcaaatgggaatctctgcatgtcttcaggatttgtttcctgtactgctttcttctctccagtgttctgtcttgtcatctctatctgctttagttttcctagcctctcagcttcatcaccccagctctgtgtcagattttctcccgctgtcatggcctggaacctccgtcaaaactctgttagaagagctgggacatttgtaaggcctgc i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 90620 543 - 3620821 TCTTGAGTTTTATTTGGAGTACAGCAATTTACTTATAAAGATAACCTTTCTGTTTTTGCTTTTAGATTTGGGGTAATTCCTCACTC----------acctttctgattattcattgtcctat---------gaagtatgaggtttttttggcctggctcatgggaatggaccctcttccaggcatggtgtgaaccccaggcatagtttcagataaccttctttaagcgtttttttttttttttttttttttttgttttttttcaccctttttttttttttttttttttttttttcccattgttctgaggaagtttgctagcacaaaaggacttttcattactctact-gaatactcaaatgggaatctctgcacatcttaaggatttgtttcctgtactgttttcttctctccagtgttctgtcctgtcatctctatctgccttagttttactagcctctcagcttcatcaccccagctctgtgtcagattttctcccattgtcatggcctggaacctctgtcaaaactctgttaaaagagctgggacatttgtaaggcctgc i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016815150v1 288 590 + 5816 I e nasLar1.chr13 103943760 598 + 126811233 I e rhiRox1.KN296402v1 645280 913 - 657959 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e papAnu3.chr13 104266395 601 + 128036923 I e tarSyr2.ABRT02374264v1 379 11 - 6859 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=11775.000000 s hg38.chrUn_KI270746v1 30684 3 + 66486 tat s panPan2.chr2A 89839684 3 + 114371477 tat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855856 2 - 998796 t-t i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47852052 3 + 94967081 tat i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554022 3 + 108979918 tat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17690706 3 + 111193037 tat i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10556423 3 - 11597128 tat i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045806 3 - 5626091 tat i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16524695 3 + 107702431 tat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 332446 3 - 409142 tat i manLeu1.NW_012101154v1 C 0 C 0 s rhiRox1.KN296402v1 646193 3 - 657959 tgt i rhiRox1.KN296402v1 I 913 N 0 s saiBol1.JH378124 27269796 3 - 28799539 tgt i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 91163 3 - 3620821 tgt i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016815150v1 288 590 + 5816 I e nasLar1.chr13 103943760 598 + 126811233 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e papAnu3.chr13 104266395 601 + 128036923 I e tarSyr2.ABRT02374264v1 379 11 - 6859 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=383194.000000 s hg38.chrUn_KI270746v1 30687 68 + 66486 atttgttttctgtctttcagtgatcacctaccatcttcattgcctgaagtccactgtgttgaaaatca s panPan2.chr2A 89839687 68 + 114371477 atttgttttctgtctttcagtgatcacttaccatcttcattgcctgaagtccactgtgttgaaaatca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855858 68 - 998796 atttgttttctgtctttcagtgatcacctaccatcttcattgcctgaagtccactgtgttgaaaatca i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47852055 67 + 94967081 atttgttttctgtctttcagtgatcacctaccatcttcattgcctgaagtccactgtgttg-aaatca i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554025 68 + 108979918 atatgttttttgtcttacagtgatcacctaccatcttcattgcctgaagcccactgtgttggaaatca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17690709 68 + 111193037 atatgttttctgtcttacagtgatcacctaccatcttcattgcctgaagcccactgtgttggaaatca i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10556426 68 - 11597128 atatgttttctgtcttacagtgatcacctaccatcttcattgcctgaagcccactgtgttggaaatca i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045809 68 - 5626091 atatgttttctgtcttacagtgatcacctaccatcttcattgcctgaagcccactgtgttggaaatca i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16524698 68 + 107702431 atatgttttctgtcttatagtgatcacctaccatcttcattgcctgaagcccactgtgttggaaatca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 332449 68 - 409142 atatgttttctgtcttatagtgatcacctaccatcttcattgcctgaagcccactgtgttggaaatca i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27269799 68 - 28799539 atttgttttctgcctttcagtgatcacctaccatcttcattgcctgaagtccactgtgttgaaaataa i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 91166 68 - 3620821 atttgttttctgcctttcagtgatcacctaccatcttcattgcctaaagtccactgtgttgaaaatca i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016815150v1 288 590 + 5816 I e nasLar1.chr13 103943760 598 + 126811233 I e ponAbe2.chr2a_random 11209260 820 + 13868332 I e papAnu3.chr13 104266395 601 + 128036923 I e tarSyr2.ABRT02374264v1 379 11 - 6859 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=19110.000000 s hg38.chrUn_KI270746v1 30755 2 + 66486 tt s panPan2.chr2A 89839755 2 + 114371477 tt i panPan2.chr2A C 0 C 0 s ponAbe2.chr2a_random 11210080 2 + 13868332 tt i ponAbe2.chr2a_random I 820 I 1640 s nomLeu3.chr14 47852122 2 + 94967081 tt i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554093 2 + 108979918 tt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17690777 2 + 111193037 tt i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10556494 2 - 11597128 tt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045877 2 - 5626091 tt i cerAty1.NW_012001187v1 C 0 C 0 s papAnu3.chr13 104266996 2 + 128036923 tt i papAnu3.chr13 I 601 I 13140 s chlSab2.chr14 16524766 2 + 107702431 tt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 332517 2 - 409142 tt i manLeu1.NW_012101154v1 C 0 C 0 s nasLar1.chr13 103944358 2 + 126811233 tt i nasLar1.chr13 I 598 I 1510 s rhiBie1.NW_016815150v1 878 2 + 5816 tt i rhiBie1.NW_016815150v1 I 590 I 2708 s saiBol1.JH378124 27269867 2 - 28799539 tt i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 91234 2 - 3620821 tt i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.ABRT02374264v1 379 11 - 6859 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I e gorGor5.CYUI01015730v1 855926 0 - 998796 C a score=295134.000000 s hg38.chrUn_KI270746v1 30757 67 + 66486 gtttaatgtattttgtctgttttgttttt-ta-ttcattcagataagatgaaaaatcagtatctgttac s panPan2.chr2A 89839757 67 + 114371477 gtttaatgtattttgtctgttttgttttt-ta-ttcattcagataagatgaaaaatcagtatctgttac i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855926 67 - 998796 gtttaatgtattttgtctgttttgttttt-ta-ttcattcagataagatgaaaaatcagtatctgttac i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47852124 67 + 94967081 gtttaatgtattttatctgttttgttttt-ta-ttcattcagataagacaaaaaatcagtatctgttac i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554095 66 + 108979918 gcttaatgtattttgtctgttttgttttt-ta-ttgtttccggtaagatgaaaactcc-tgtccgttac i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17690779 66 + 111193037 gcttaatgtattttgtctgttttgttttt-ta-ttgtttcaggtaagatgaaaactcc-tgtccgttac i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10556496 66 - 11597128 gcttaatgtattttgtctgttttgttttt-ta-ttgtttcaggtaagatgaaaactcc-tgtccgttac i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045879 66 - 5626091 gcttaatgtattttgtctgttttgttttt-ta-ttgtttcaggtaagatgaaaactcc-tgtccgttac i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16524768 66 + 107702431 gcttaatgtattttgtctgttttgttttg-ta-ttgtttcaggtaagatgaaaaatcc-tgtccgttac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 332519 66 - 409142 gcttaatgtattttgtctgttttgttttt-ta-ttgtttcaggtaagatgaaaaatcc-tgtccgttac i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27269869 67 - 28799539 gtttaatgtattttgtctgttttgtttttata-ttttttcagttaagaagaaagatcagtacctgttc- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 91236 68 - 3620821 gtttaatgtattttatctgttttgtttttatatttttttcagttaagaagaaagatcagtacctgttc- i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.ABRT02374264v1 379 11 - 6859 I e otoGar3.GL873538 19650062 16812 - 27850971 I e calJac3.chr14 14812474 17338 + 108792865 I a score=464185.000000 s hg38.chrUn_KI270746v1 30824 76 + 66486 tccatcagagctagtaacagattgcagcagagcttcagcacagcacatgctgcaaactggccagagtgcttttctT s panPan2.chr2A 89839824 76 + 114371477 tccatcagagctagtaacagaTTGCAGCAGAGCTTCAGCACAgcacatgctgcaaactggccagagttctttgctt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 855993 76 - 998796 tccatcagagctagtaacagaTTGCAGCAGAGCTTCAGCACAgcacatgctgcaaactggccagagtgctttgctt i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47852191 76 + 94967081 tccatcagagctagtaacagaTTGCAGCAGAGCTTCAGCACAgcacatgctgcaaactggccagagtgctttgctt i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554161 76 + 108979918 tccatcagagctagtaatagaTTGCAGCAGAGCTTCGGCACAgcacgtgctgtaaactggccagggtgttttgctt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17690845 76 + 111193037 tccatcagagctagtaatagaTTGCAGCAGAGCTTCGGCACAgcacgtgctgtcaactggccagggtgttttgctt i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10556562 76 - 11597128 gccatcagagctagtaatagaTTGCAGCAGAGCTTCGGCACAgcacgtgctgtcaactggccagggtgttttgctt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5045945 76 - 5626091 tccatcagagctagtaatagaTTGCAACAGAGCTTCGGCACAgcacatgctgtaaactggccagggtgttttgctt i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16524834 76 + 107702431 tccatcagagctagtaatagaTTGCAGCAGAGCTTCGGCACAgcacatgctgtaaactggccagagtgttttgctt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 332585 76 - 409142 tccatcagagctagtaatagaTTGCAGCAGAGCTTCGGCACAgcacatgctgtaaactggccagggtgttttgctt i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14829812 71 + 108792865 TTTATTTGGGCTAGTAGCAGATTGCAACAgagctt-----catcacatgctgcaaactggccggaatgctttgctt i calJac3.chr14 I 17338 C 0 s saiBol1.JH378124 27269936 71 - 28799539 tccatcagggctagtagcagaTtgcagcagagctt-----catcacatgctgcaaactggccagaatgctttgctt i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 91304 71 - 3620821 tccatcagggctagtagcagaTtgcagcagagctt-----catcacatgctgcaaactggccagaatgctttgctt i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.ABRT02374264v1 379 11 - 6859 I e otoGar3.GL873538 19650062 16812 - 27850971 I a score=8281.000000 s hg38.chrUn_KI270746v1 30900 1 + 66486 T s panPan2.chr2A 89839900 1 + 114371477 t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 856069 1 - 998796 t i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47852267 1 + 94967081 t i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554237 1 + 108979918 t i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17690921 1 + 111193037 t i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10556638 1 - 11597128 t i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5046021 1 - 5626091 t i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16524910 1 + 107702431 t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 332661 1 - 409142 t i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14829883 1 + 108792865 t i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27270007 1 - 28799539 t i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 91375 1 - 3620821 t i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 1003659 1 + 1054607 t i tarSyr2.KE950423v1 I 4588 I 271 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e otoGar3.GL873538 19650062 16812 - 27850971 I a score=1093917.000000 s hg38.chrUn_KI270746v1 30901 199 + 66486 cctctttgcttaactgcttctttctcatccttcatttctcagtgtag-catctcttcctcacggaaa-----------------tcttccctgggtgaagtatagatcaaattatcttatgcaatcatataacta---------------------------------------------------------------------------------------------tgg--tttgtg--tctttttt---acaggacccatctgagtttataactgtcatctttttatcttggttcttcgctatactttaagcta s panPan2.chr2A 89839901 202 + 114371477 cctctttgcttaactgcttctttctcatccttcatttctcagtgtag-catctcttcctcagggaaa-----------------tcttccctaggtgaagtatagatcaaattatcttatgcaatcatataacta---------------------------------------------------------------------------------------------tgg--tttttc--tctttttttttacaagacctatctgagtttataactgtcacctttttatcttggttcttcactacacttgaagcta i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 856070 196 - 998796 -ctctttgcttaactgcttctttctcatccttcatttctcagtgtag-catctcttcctcagggaaa-----------------tcttccctaggtgaagtatagatcaaattatcttatgcaatcatataacta---------------------------------------------------------------------------------------------tgg--tttttt--ttttttt----aca-gacctatctgagtttataactgtcacctttttatcttggttcttcactacactttaagcta i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47852268 197 + 94967081 cctctttgcttaactgcttctttctcatccttcatttctcagtgtag-catctcttcctcagggaaa-----------------tcttccctgggtgaagtatagatcaaattatcttatgcaatcatataacta---------------------------------------------------------------------------------------------tgg--tttttt--tttttt-----acaggacctatctgagtttataactgtcacctttttatcttggttcttcactatactttaagcta i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554238 189 + 108979918 cctttt--------tgcttctttctcatccttcatttctcagtgtag-tgtctcttcctcagggaaa-----------------tcttccctgggtgaagtatagatcaaattatcttatgcagtcatataacta--------------------------------------------------------------------------------------------cggt--tttttt--ttttt------acaggacctgtctgagtttataattgtcacctttttatcttggttcttcattatgctttaagcta i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17690922 281 + 111193037 cctttt--------tgcttctttctcatccttcatttctcagtgtag-tgtctcttcctcagggaaa-----------------tcttccctgGGTGAAGTATAGATCAAATTATCTTATGCAGTCATATAACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttttttttttttttttttttt--tttttt--ttttt------ACAGGACCTGTCTGAGTttataattgtcacctttttatcttggttcttcattatgctttaagcta i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10556639 219 - 11597128 cctttttgcctaactgcttctttctcatccttcatttctcagtgtag-tgtctcttcctcagggaaa-----------------tcttccctgggtgaagtatagatcaaattatcttatgcagtcatataacta----------------------------------------------------------------------tggtttactatggttttttttttttt--tttttt--ttttt------acaggacctgtctgagtttataattgtcacctttttatcttggttcttcattatgctttaagcta i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5046022 196 - 5626091 cctttttgcctaactgcttctttctcatccttcatttctcagtgtag-tatctcttcttcagggaaa-----------------tcttccctgagtgaagtatagatcaaattatcttatgcagtcatataacta---------------------------------------------------------------------------------------------tgg--tttttt--ttttt------acaggacctgtctgagtttataattgtcacctttttatcttggttcttcattatgctttaagcta i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16524911 198 + 107702431 cctttttgcctaactgcttctttctcatccttcatttctcagtgtag-tatctcttcctcagggaaa-----------------tcttccctgggtgcagtatagatcaaattatcttatgcagtcatataacta---------------------------------------------------------------------------------------------tggtttttttt--ttttt------ataggacctgtctgagtttataattgtcacctttttatcttggttcttcattatgctttaagcta i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 332662 196 - 409142 cctttttgcctaactgcttctttctcatccttcatttctcagtgtag-tatctcttcctcagggaaa-----------------tcttccctgggtgaagtatagatcaaattatcttatgcagtcatataacta---------------------------------------------------------------------------------------------tgg--tttttt--ttttt------acaggacctgtctgagtttataattgtcacctttttatcttggttcttcattatgctttaagcta i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14829884 208 + 108792865 cctctttgc----ctatttccttctcaaccttcatttctcagtgtagccacctcttcctcagggaaatctttacattgtacacctctttctcaggtgaagtgtagatcaaattatcttatgcaatcataaaacta---------------------------------------------------------------------------------------------tgt--attttttctttttc-----acagtac----ctgagtttataattgtcacc-ttttatcttggttcttcactatactttaagcta i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27270008 197 - 28799539 ccgctttgcctgactattttcttctcatccttcatttctcagtatagccgtctcttcctcagggaaa-----------------tcttccctgggtgaagtatagatcaaattatcttatacaatcatataacta---------------------------------------------------------------------------------------------tgt--cttttt--ttttcc-----acagtacctatctaagtttataattgtcacc-ttttatcttggttcttcactatactttaagcta i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 91376 193 - 3620821 cctctttgc----ctattttcttctcatccttcatttctcagtgtagccatgtctacctcagggaaa-----------------tcttccctgggtgaagtatagatcaaattatcttatgcaatcatataacta---------------------------------------------------------------------------------------------tgt--cttttt--tttttc-----acagtacctatctgagtttataattgtcacc-ttttatcttggttcttcactatactttaaacta i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003660 271 + 1054607 I e otoGar3.GL873538 19650062 16812 - 27850971 I a score=616169.000000 s hg38.chrUn_KI270746v1 31100 89 + 66486 aaataatagcagaagtgttg-tcttatcttcagagcttattataatatcttccaccttgtaggcactcaatatgtacatacttgttcagt s panPan2.chr2A 89840103 89 + 114371477 aaacaatagcagaggtgttg-tcttatctgcagagcttactataatatcttccaccttgtaggcactcaatatatacatatttattcaat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 856266 88 - 998796 aaacaatagcagaggtgttg-tcttatctgcagaccttactataatatcttccaccttgtaggcactcaatatgtacata-ttgttcaat i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47852465 89 + 94967081 aaacaatagcagaggtgttg-tcttatctgcagagcttactatagtatcttccaccttgtaggcactcaatatgtacatacttgttcaat i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554427 89 + 108979918 aaacaatagcagaggtgttg-tcttatctgcagaccttagtataatatcttctaccttgtaggcactcaatatgtacatatttgttcaat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17691203 89 + 111193037 aaacaatagcagaggtggtg-tcttatctgcagaccttagtataatatcttctaccttgtaggccctcaatatgtacatatttgttcaat i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10556858 89 - 11597128 aaacaatagcagaggtggtg-tcttatctgcagaccttagtataatatcttctaccttgtaggccctcaatatgtacatatttgttcaat i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5046218 89 - 5626091 aaacaatagcagaggtgttg-tcttatctgcagaccttagtataatatcttctaccttgtaggcactcaatatgtacatatttgttcaat i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16525109 89 + 107702431 aaacaatagcagaggtgttg-tcttatctgcagaccttagtataatatcttctaccttgtaggcactcaatatgtacatatttgttcaat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 332858 89 - 409142 aaacaatagcagaggtgttg-tcttatctgcagaccttagtataatatcttctaccttgtaggcactcaatatgtacatatttgttcaat i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14830092 89 + 108792865 aaacaagagcagaggtgttg-tcttatctgcagagcttactataatgtcttccaccttgtaggtattcaacatgtacatatctgttcagt i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27270205 89 - 28799539 aaacaagagcagaggtgttg-tcttatctgcagagcttactataatgtcttccaccttgtaggcattcagcatgtacatatttgttcact i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 91569 89 - 3620821 aaacaagagcagagatgttg-tcttatctgcagagcttactataatgtcttccaccttgtaggcattcaacatgtaaatatttgttcagt i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19666874 86 - 27850971 AACCAAGATCAGAAGTCTTGTTTTtatcttcagagattagtgtaatgtcttcctcattgtatgcactaaa----tacatatttgctcact i otoGar3.GL873538 I 16812 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003660 271 + 1054607 I a score=122835.000000 s hg38.chrUn_KI270746v1 31189 21 + 66486 gtctgaatGAATACATGTTAA s panPan2.chr2A 89840192 21 + 114371477 gtatgaatGAATACATGTTAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 856354 20 - 998796 gtatgaatGAATAC-TGTTAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47852554 21 + 94967081 gtatgaatGAATACATGTTAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554516 21 + 108979918 gtatgaatGAATGCATGTTAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17691292 21 + 111193037 gaatgaatGAATGCATGTTAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10556947 21 - 11597128 gaatgaatGAATGCATGTTAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5046307 21 - 5626091 atatgaatGAATGCATGTTAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16525198 21 + 107702431 gtatgaatGAATGCATGTTAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 332947 21 - 409142 gtatgaatGAATGCATGTTAA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14830181 20 + 108792865 atatgaatCAATGCTTGTT-A i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27270294 20 - 28799539 atatgaatCAATGCTTGTT-A i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 91658 20 - 3620821 atatgaatCAATGCTTGTT-A i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 1003931 21 + 1054607 GTATGCACTGTTGAATGTTAA i tarSyr2.KE950423v1 I 271 I 1795 s otoGar3.GL873538 19666960 21 - 27850971 gtgtgaatGAGTGAATATTAA i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I a score=2261652.000000 s hg38.chrUn_KI270746v1 31210 348 + 66486 AAATGCACAGTCCTTTATA-TCCAGAAATCTACTCATGTATTTTATCTCTACTTTGCTTTTTCCCGGTTACAGATTGTGTTCACCTATTGAAAATTAAAAATACATTTTGTTTGTGTAAAAGATGAATAGAACTTAAAGAAAATCTCTGTGAGCAACTTGGAGTAAAAATTCAAAAAAATGAAAAATAAGGCTAGTGTACTACAAAAGAGACTATCTGAAAAAGAAGAAATAAAATCGCAGTTAGAGCATGAAGCACTTGAATTGGAAAAA--ACTCTGTAGTTTGAGGTATGAC---CTAGTTTTAAATAAATGTTTGAACTATTTGTTTTATATTAAAGACATATAAGGAGA s panPan2.chr2A 89840213 349 + 114371477 AAATGCACAGTCCTTTATA-TCCAAAAATCTACTCATGTATTTTATCTCTACTTTGTTTTTTCCTGGTTACAGATTGTGTTCACCTATTGAAAATTAAAAATACATTTTGTTTATGTAAAAGATCAATAGAACTTAAAGATAATCACTGTGAGCAACTTAGAGTAAAAATTCAAAAAA-TGAAAAATAAGGCTAGTGTACTACAAAAGAGACTATCTGAAAAAGAAGAAATAAAATCGCAGTTAGAGCATGAAAGACTTCAATTGGAAAAAGAACTCTGTAGTTTGAGGTATGAC---CTAGTTTTAAATAAATGTTTGAACTATTTGTTTTATATTAAAGATGTATAAGGAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 856374 347 - 998796 AAATGCACAGTCCTTTATA-TCCAAAAATCTACTCATGTATTTTATCTCTACTTTGTTTTTTCCTGGTTACAGATTGTGTTCACCTATTGAAAATTAAAAATACATTTTGTTTATGTAAAAGATCAATAGAACTTAAAGATAATCACTGTGAGCAACTTAGAGTAAAAATTCAAAAAA-TGAAAAATAAGGCTAGTGTACTACAAAAGAGACTATCTGAAAAAGAAGAAATAAAATCGCAGTTAGAGCATGAAA-ACTTGAATTGGAAAAAGAACTCTGTAGTTTGAGGTATGA----CTAGTTTTAAATAAATGTTTGAACTGTTTGTTTTATATTAAAGACGTATAAGGAGA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47852575 345 + 94967081 AAATGCACGGTCCTTTATA-TCCAAAAATCTACTCATGTATTTTATCTCTACTTTGTTTTTTCCTGGTTACAGATTGTGTTCGCCTATTGAAAATTAAAAATACAT----TTTATGTAAAAGATCAATAGAACTTAAAGATAACCACTGTGAGCAACTTAGAGTAAAAATTCAAAAAA-TGTAAAATAAGGCTCGTGTACTACAAAAGCGACTATCTGAAAAAGAAGAAATAAAATTGCAGTTAGAGCATGAAGGAATTGAATTGGAAAAAGAACTCTGTAGTTTCAGGTATGAC---CTAGTTTTAAATAAATGTTTGAACTATTTGTTTTATATTAAAGACATATAAGGAGG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554537 349 + 108979918 AAATGCACAGTCCTTTATA-TCCAAAAACTTACTCATGTATTTTATCTCTATTTTGTTTTTTCCCGGTTACAGATTGTGTTCGCCTATCAAAAATTAAAAATGCATTTCGTTTTTGTAAAAGATCAATAAAACTTAAAGATAATCACTGTGAGCGACTTATAGTAAAAATTCAAAAAA-TGAAAAATAAGGTTAGTGTACTACGGAAGAGACTATCTGAAAAAGAAGAAATAAAATCGTGCTTAGAGCATGAAAAACTTGAATGCGAACAAGAACTCTGTAGTGTGAGGTATGAC---CTTGTTCTAAAGAAATGTTAGAACTATTTGTTTTATACTAAAGACGTATAAGGAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17691313 349 + 111193037 AAATGCACAGTCCTTTATA-TCCAAAAACTTACTCATGTATTTTGTCTCTATTTTGTTTTTTCCCGGTTACAGATTGTGTTCGCCTATCAAAAATTAAAAATGCATTTCGTTTTTGTAAAAGATCAATAAAACTTAAAGATAATCACTGTGAGCGACTTATAGTAAAAATTCAAAAAA-TGAAAAATAAGGTTAGTGTACTACGGAAGAGACTATCTGAAAAAGAAGAAATAAAATCGTGCTTGGAGCATGAAAAACTTGAATGCGAACAAGAACTCTGTAGTGTGAGGTATGAC---CTTGTTCTAAAGAAATGTTAGAACTATTCGTTTTATACTAAAGACGTATAAGGAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10556968 349 - 11597128 AAATGCACAGTCCTTTATA-TCCAAAAACTTACTCATGTATTTTGTCTCTATTTTGTTTTTTCCCGGTTACAGATTGTGTTCGCCTATCAAAAATTAAAAATGCATTTCGTTTTTGTAAAAGATCAATAAAACTTAAAGATAATCACTGTGAGCGACTTATAGTAAAAATTCAAAAAA-TGAAAAATAAGGTTAGTGTACTACGGAAGAGACTATCTGAAAAAGAAGAAATAAAATCGTGCTTAGAGCATGAAAAACTTGAATGCGAACAAGAACTCTGTAGTGTGAGGTATGAC---CTTGTTCTAAAGAAATGTTAGAACTATTTGTTTTATACTAAAGACGTATAAGGAAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5046328 349 - 5626091 AAATGCACAGTCCTTTGTA-TCCAAAAACTTACTCATGTATTTTATCTCTATTTTGTTTTTTCCCGGTTACAGATTGTGTTCGCCTATCAAAAATTAAAAATGCATTTTGTTTTTGTAAAAGATCAATAAAACTTAAAGATAATCACTGTGAGCGACTTATAGTAAAAATTCAAAAAA-TGAAAAATAAGTTTAGTGTACTACAGAAGAGACTATCTGAAAAAGAAGAAATAAAATCGTGCTTAGAGCATGAAAAACTTGAATGCGAACAAGAACTCTGTAGTGTGAGGTATGAC---CTTGTTCTAAAGAAATGTTAGAACTATTTGTTTTATACTAAAGACGTATAAGGAAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16525219 349 + 107702431 AAATGCACAGTCCTTTATA-TCCAAAAACTTACTCATGTATTTTATCTCTATTTTGTTTTTTCCTGGTTACAGATTGTATTCATCTATCAAAAATTAAAAATACATTTTGTTTTTGTAAAAGATCAATAAAACTTAAAGATAATCACTGTGAGCGACGTATAGTAAAAATTCAAAAAA-TGAAAAATAAGGTTAGTGTACTACGGAAGAGACTATCTGAAAAAGAAGAAATAAAATCGTGCTTAGAGCATGAAAAACTTGAATGCAAACAAGAACTCTGTAGTGTGAGGTATGAC---CTTGTTCTAAAGAAATGTTAGAACTCTTTGTTTTATACTAAAGACGTATAAGGAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 332968 349 - 409142 AAATGCACAGTCCTTTATA-TCCAAAAACTTACTCATGTATTTTATCTCTATTTTGTTTTTTCCCAGTTACAGATTGTGTTCGCCTATCAAAAATTAAAAATGCATTTTGTTTTTGTAAAAGATCAATAAAACTTAAAGATAATCACTGTGAGCGACTTACAGTAAAAATTCAAAAAA-TGAAAAATAAGGTTAGTGTACTACGGAAGAGACTATCTGAAAAAGAAGAAATAGAATCGTGCTTACAGCATGAAAAACTTGAATACGAACAAGAACTCTGTAGTGTGAGGTATGAC---CTTGTTCTAAAGAAATGTTAGAACTATTTGTTTTATACTAAAGACGTATAAGGAAA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14830201 344 + 108792865 AAATGCACAGTCCTTTATATTAAAAAAATCTACTCATGTATTTTATCTCTACTTTGTTTTTTCCTGTTTACAGATTGTGTTCACCTATCAAAAATTAAAAATGCAATTTATTTACGTGAAAGATCAAT---------AGATAATCACTGTGAACGACTCACTAGAAAAATTCAAAAAA-TGAAAAATAAGATTAGTGTGCTACAAAAGAGACTATCTGAAGAAAAAGAAATAATATCACAGTTAGAGCATGAAAAACCTGAATGGGAAAAAGCACTCTGCAGTTTGAGGTATGACATTCTAGTTTTTAAGAAATGTTTGAATTATTTATTTACTACTAAGGATGTATAAGGAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27270314 342 - 28799539 AAATGCACAGTCCTTTATA-TAAAAAAATCTACTCATATATTTTATCTCTACCTT-TTTTTTCCTGTTTACAGATTGTGTTCACCTATTAAAAATTAAAAATGCAATTTATTTACGTGAAAGATCAAT---------AGAAAATCACTGTGAGCGACTTACAGGAAAAATTCAAAAAA-TGAAAAATAAGATTAGTATACTACAAAAGAGACTATCTGAAGAAAAGGAAATAATATCACAGTTAGAGCATGAAAAACCTGAATGGGAAAAAATACTCTGCAGTTTGAGGTATGACATTCTAGTTTTTAAGAAATGTTTGAATTATTTATTTATTATTAAGGGTGTATAAGGATA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 91678 343 - 3620821 AAATGCACAGTCCTTTATA-TCAAAAAATCTACTCATGTATTTTATCTCTACTTTGTTTTTTCCTGTTTACAGATTGTGCTCACCTATTAAAAATTAAAAATGCAATTTATTTACATGAAAGATCAAT---------AGAAAATCACTGTGAGCGACTTACAGGAAAAATTCAAAAAA-TGAAAAATAAGATTAGTATACTACAAAAGAGACTATCTGAAGAAAAAGAAATAATATCACAGTTAGAGCATGAAAAACCTGAATGGGAAAAAGCACTCTGCAGTTTGAGGTATGACATTCTAGTTTTTAAGAAATGTTTGAATTATTTGTTTATTATTAAGGTTGTATAAGGATA i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19666981 344 - 27850971 -AATATGCAGTCCTTTCTA-CCTAGAAAG-TGCTCATATA---TATTTTTATTTT--TTTCTCTTTGATACAGATTCTGTTAGCCTATTGAAAATCCAGGATGCATTTCTTTCCTGTGAAAGATTAATGGAACTTAAAAAAAATCACTGTGAACAACTTACAGTAAAAGTTAAGAAAA-TGGAAAGTAAGGTTAGCGTCATACAAAAGGAGCTGTCTGAAACAAAAGAAATCAAATCACAGTTAGAGCATCAAAAAGTTGAACTGGAACAAGAACTCTGCAGTTTGAGGTATGATATCCTAGTTTTAAA-ATATGTTTTAACTATCTACTTTATTCTAAAGATATATAAGAGAA i otoGar3.GL873538 C 0 I 364 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=121355.000000 s hg38.chrUn_KI270746v1 31558 22 + 66486 GGTTTTGTAATTATGAACTTTC s panPan2.chr2A 89840562 22 + 114371477 AGTTTTGTAATTGCAAACTTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 856721 22 - 998796 AGTTTTGTAATTGCAAACTTTC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47852920 22 + 94967081 AGTTTTGTAATTGCGAACTTTC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554886 22 + 108979918 ATTTTTGTAATTGCTAACTTTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17691662 22 + 111193037 ATTTTTGTAATTGCTAACTTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10557317 22 - 11597128 ATTTTTGTAATTGCTAACTTTC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5046677 22 - 5626091 ATTTTTGTAATTGCTAACTTTC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16525568 22 + 107702431 ATGTTTGTAATTGCTAACTTTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 333317 22 - 409142 ATTTTTGTAATTGCTAACTTTC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14830545 22 + 108792865 ATTTTTGTAACTGTGGATTTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27270656 22 - 28799539 ATTTTTGTAATCGCTGATTTTC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 92021 22 - 3620821 ATTTTTGTAACCGCGGATTTTC i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e otoGar3.GL873538 19667325 364 - 27850971 I a score=479842.000000 s hg38.chrUn_KI270746v1 31580 71 + 66486 CTTCTAGGATTTAACAAGGAAGAAAGCTTCTTAATCTTATAGAGTGTGAAATTATT----GGATATAATATCACT s panPan2.chr2A 89840584 71 + 114371477 CTTCTAGGATTTAACAGGGAAGAAAACTTCTTAATCTTATGGAGCGTGAAATTATT----GGATATAATATCACA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 856743 71 - 998796 CTTCTAGGATTTAACAGGGAAGAAAGCTTCTTAATCTTATGGAGTGTGAAATTATT----GGATATAATATCACA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47852942 71 + 94967081 CTTCTAGGATTTAACAGGGAAGAAAGCTTCTTAATCTTATGGAGTGTGAAATTATT----GGATATAATATCACA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554908 70 + 108979918 CTTCTAGGATTT-ACAGGGAAAAAAGTTTCTTAATCTTATGGAGTGTGAAATTATT----GGATATAATATCACA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17691684 70 + 111193037 CTTCTAGGATTT-ACAGGGAAAAAAGTTTCTTAATCTTACGGAGTGTGAAATTATT----GGATATAATATCACA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10557339 70 - 11597128 CTTCTAGGATTT-ACAGGGAAAAAAGTTTCTTAATCTTATGGAGTGTGAAATTATT----GGATATAATATCACA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5046699 70 - 5626091 CTTCTAGGATTT-ACAGGGAAAAAAGTTTCTTAATCTTATGGAGTGTGAAATTATT----GGATATAATATCACA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16525590 70 + 107702431 CTTCTAGGATTT-ACAGGGAAAAAAGTTTCTTAATCTTATGGAGTGTGAAATTATT----GAATATAATATCACA i chlSab2.chr14 C 0 I 335 s manLeu1.NW_012101154v1 333339 70 - 409142 CTTCTAGGATTT-ACAGGGAAAAAAGTTTCTTAATCTTATGGAGTGTGAAATTATT----GGATATGATATCACA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14830567 71 + 108792865 TTTCTAGGATTTAACAGGGAAAAAAGCTTCTTAATCTTGTGGAGTGCGAAATTCTT----CAATACAATATCACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27270678 71 - 28799539 TTTCTAGGATTTAACAGGGAAGAAAGCATCTTAATCTTGTGGAGTGTGAAATTCTT----CAATATAATATCACA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 92043 71 - 3620821 TTTCTAGGATTTAACAGGGAAGAAAGCTCCTTAATCTTGTGGAGTGCAAAATTCTT----CAATATAATATCACA i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19667689 75 - 27850971 CTTCTTGGGTTTAACAAGGGAGAAAACTTCTTAGTCTTGTGGTGTATAAAATTCCTGGAAGGAAATAACGTAACA i otoGar3.GL873538 I 364 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=1664962.000000 s hg38.chrUn_KI270746v1 31651 247 + 66486 AGTTCTTAATTGTGAATACTTCTCTAATAATTAAATGC----atattcttttaaatcatagttttaa-tggctgtatagaatattatgctttggaaatctcattatttaattgatgaattgaattttaggttttaaaaagtttttgt------aataatgctacaaggaacatcttttatatacacatagttttctacatttctaattatttac---------------------------------cttggataaattcttc--------------tggttaaagtatagacacttttttagat s panPan2.chr2A 89840655 245 + 114371477 AGTTCTTAattgtgagtacttctctaataattaaatgc----atattcttttaagtcatggttttaa-tggccctgtagaattttaccctttggaaatctcattatttaattgatgaatggaattttaggttttaaaaa-tttttgt------aataatgctacaaggaacgtcttttatatacacatagttttctacatttctaattatttac---------------------------------tttggataaattcttc--------------tggttaaagtatagaaacttttt-agat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 856814 242 - 998796 AGTTCTTAATTGTGA-TACTTCTCTAATAATTAAATGC----atattcttttaaatcatagttttaa-tggctgtgtagaattttaccctttgg-aatctcattatttaattgatgaatggaattttaggttttaaaaa-tttttgt------aataacgctacaaggaacatcttttatatacacatagttttctacatttctaattatttac----------------------------------ttggataaattcttc--------------tggttaaagtacagaaacttttt-agat i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47853013 247 + 94967081 AGTTCTTAattgtgaatatttctctaataattaaatgc----gtattcttttaaatcatagttttaa-tggctgtacagaattttaccctttggaaatctcattatttaattgatgaattgaattttaggttttaaaaagtttttgt------aataatgctacaaggaacatcttttatatacacatagttttctacatttctaattatttac---------------------------------tttggataaattcttc--------------tggttaaagtatagaaacttttttagat i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108554978 247 + 108979918 AGTTCTTAattgtgaatacttctctaataattaaatgc----atattcttttaaatcatagttttaa-tggctgtatagaattttaccctttggaaatctcattatttaattgatgaattgaattttaggttttaaaaagtttttgt------attaatgctacaaggaacatcttttatttacacgtagttttctacatttttaattatttac---------------------------------tttggataaattcttc--------------tggttaaagtacagaaacttttttagat i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17691754 247 + 111193037 AGTTCTTAattgtgaatacttctctaataattaaatgc----atattcttttaaatcatagttttaa-tggctgtatagaattttaccctttggaaatctcattatttaattgatgaattgaattttaggttttaaaaagcttttgt------attaatgctacaaggaacatcttttatttacacgtagttttctacatttttaattatttac---------------------------------tttggataaattcttc--------------tggttaaagtacagaaacttttttagat i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10557409 247 - 11597128 AGTTCTTAATTGTGAATACTTCTCTAATAATTAAATGC----atattcttttaaatcatagttttaa-tggctgtatagaattttaccctttggaaatctcattatttaattgatgaattgaattttaggttttaaaaagtttttgt------attaatgctacaaggaacatcttttatttacacgtagttttctacatttttaattatttac---------------------------------tttggataaattcttc--------------tggttaaagtacagaaacttttttagat i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5046769 247 - 5626091 AGTTCTTAATTGTGAATACTTCTCTAATAATTAAATGC----atgttcttttaaatcatagttttaa-tggctgtataggattttaccctttggaaatctcattatttaattgatgaattgaattttaggttttaaaaagtttttgt------attaatgctacaaggaacatcttttatttacacgtagttttctacatttttaattatttac---------------------------------tttggataaattcttc--------------tggttaaagtacagaaacttttttagat i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16525995 247 + 107702431 AGTTCTTAattgtgaatacttctctaataattaaatgc----atattcttttaaatcatagttttaa-tggctgtatagaattttaccctttggaaatctcattatttaattgatgaattgaattttaggctttaaaaagtttttgt------attaatgctacaaggaacatcttttatttacacgtagttttctacatttttaattatttac---------------------------------tttggataaattcttc--------------tggttaaagtacagaaacttttttagat i chlSab2.chr14 I 335 C 0 s manLeu1.NW_012101154v1 333409 247 - 409142 AGTTCTTAATTGTGAATACTTCTCTAATAATTAAATGC----atattcttttaaatcatagttttaa-tggctgtatagaattttaccctttggaaatctcattatttaattgatgaattaaattttaggttttaaaaagtttttgt------attaatgctacaaggaacatcttttatttacacgtagttttctacatttttaattatttac---------------------------------tttggataaattcttc--------------tggttaaagtacagaaacttttttagat i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14830638 246 + 108792865 AGTTCTTAATTGTGAATACTTCCCTAATAACTAAATGC----ATATTCTTTTAAATTGTAGTTTTAA-TGAGTGTATAGAATTTTACCCTATGGAAATTTCATTATTTAATTGACAAATTGAATTTTAGGTTTTAAAAAGTTTTTGT------ATtaatgctgcaaagaacattttttacatatacatagttttctacatttctaattatttac---------------------------------tttgggcaaattattc--------------tggttaaagcatagaaacttttaaaaa- i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27270749 244 - 28799539 AGTTCTTAATTGTGAATACTTCCCTAATAACTAAATGC----ATATTCTTTTAAGTCATAGTTTTAATTGAGTGTATAGAATTTTGCCCTATGGAAATCTCATTATTTAATTGACAAATTGAATTTTAGGTTTTAAAAAGTTTTTGT------ATtaatgctgcaaagaacatttattacatatacatagttttctacatttctaattatttac---------------------------------tttgggcaa---attc--------------tagttaaagcatagaaacttttttaaa- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 92114 246 - 3620821 AGTTCTTAATTGTGAATACTTCCCTAATAACTAAAtgc----atattcttttaaatcgtagttttaa-tgagtgtatagaattttaccctatggaaatcccattatttaattgacaaattgaattttaggttttaaaaagtttttgt------attaatgctgtaaagaacattttttacatatgcatagttttctacatttctaattatttac---------------------------------tttgggtaaatcattc--------------tggttaaagcatagaaacttttaaaaa- i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19667764 278 - 27850971 AATTCTTATCTGTGAATACTT--CTAATAATTAAATACATATATATTCTTTTAAATCATAATTGTAA-TGGTTATATGGAAT---------------TCTCATTATTTAAT------ATTGAatttagggtttaaaaatttttttgtattataattaatgctgcaaggagcatcttttatgta---atttttttctacatttctaattatttactgtgaatagtttctctacatttctaattattattctgaataaactcttcagcatagaactacttggttaaagtataataaccttttttatt i otoGar3.GL873538 C 0 I 143 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=26299.000000 s hg38.chrUn_KI270746v1 31898 7 + 66486 ctgtttt s panPan2.chr2A 89840900 7 + 114371477 ctgtttt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857056 7 - 998796 ctgtttt i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47853260 7 + 94967081 ctgtttt i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108555225 7 + 108979918 ctgtttt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17692001 7 + 111193037 ctgtttt i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10557656 7 - 11597128 ctgtttt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5047016 7 - 5626091 ctgtttt i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16526242 7 + 107702431 ctgtttt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 333656 7 - 409142 ctgtttt i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14830884 1 + 108792865 ------a i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27270993 1 - 28799539 ------a i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 92360 1 - 3620821 ------a i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19668185 7 - 27850971 ctgtttt i otoGar3.GL873538 I 143 I 124 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=1714452.000000 s hg38.chrUn_KI270746v1 31905 272 + 66486 agatctttgatcaatatttctaaattgttcttaagaatgtttatattaatttataattcgaccaacagagtataaaaCAGATATTTTTCTTTACACAGAATAATTATTTTAAAAACTATCAgccaggtgcagtggcttatgcctgtagtcccagcacttttgtaggccgaggtg---ggcagat-cacgaggtcagg--agtttgagacca------gtctgcccaac-gtagtgaaatgctatctctactaaaaatacaaaaaattagccaggtgttgta--gt-tg s panPan2.chr2A 89840907 272 + 114371477 agatctttgatcaatatttctaaattgttcttaagaatgtttatattaatttataattcaaccaacagagtataaaaCAGATATTTTTCTTTACCCAGAATAATTATTTTAAAAATTATCAgctgggtgcagtggcttatgcctgtaatcccagcactttggtaggccgaggtg---ggcagat-cacgaggtcagg--agttcgagccca------gtctgcccaac-atagtgaaatgctatctctactaaaaatacaaaaaattagccaggtgtggtg--gt-tg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857063 271 - 998796 agatctttgatc-atatttctaaattgttcttaagaatgtttatattaatttataattcaaccaacagagtataaaaCAGATATTTTTCTTTACCCAGAATAATTATTTTAAAAATTATCAgctgggtgcagtggctcatgcctgtaatcccagcactttggtaggccgaggtg---ggcagat-cacgaggtcagg--agtttgagccca------gtctgcccaac-atagtgaaatgctgtctctactaacaatacaaaaagttagccaggtgtggta--gt-tg i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47853267 272 + 94967081 agatctttgatcaatatttctaaattgttcttaagaatgtttatattaatttataattcaaccaacagagtatgaaaCAGATATTTTTCTTTACCCAGAATAATTATTTAAAAAATTATCAgccgggtgcagtggctcacgcctgtaatcccagcactttggtaggccgaggtg---ggcagat-cacgaggtcagg--agttcaagacca------gtctgcccaac-atagtgaaatgctatctctactaaaaatacaaaaaattagccaggtgtggtg--gt-tg i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108555232 272 + 108979918 agatctttgatcaatatttctaaattgttcttaagaaagtttatattaatttataattcaatcaacagggtataaaaTAGATA-TTTTCTTTATCCAGAATAATTATTTTAAAAATTATCAgtcgggtgcggtggctcacgcctgtaatcccagcacttcgggaggctgaggtg---ggcagat-cacgaggtcagg--agtttgagacca------gtctggccaac-ataatgaaatgctgtctctactaaaaatacaaaaaattagccaggcgtggtg--gtgtg i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17692008 272 + 111193037 agatctttgatcaatatttctaaattgttcttaagaaagtttatattaatttataattcaatcaacagggtataaaaTAGATA-TTTTCTTTATCCAGAATAATTATTTTAAAAATTATCAgtcgggtgcggtggctcacacctgtaatcccagcacttcgggaggctgaggtg---ggcagat-cacgaggtcagg--agtttgagaccg------gtctggccaac-ataatgaaatgctgtctctactaaaaatacaaaaaattagccaggcatggtg--gtgtg i macFas5.chr13 C 0 I 1 s macNem1.NW_012014799v1 10557663 274 - 11597128 agatctttgatcaatatttctaaattgttcttaagaaagtttatattaatttataattcaatcaacagggtataaaaTAGATA-TTTTCTTTATCCAGAATAATTATTTTAAAAATTATCAgtcgggtgcggtggctcacacctgtaatcccagcacttcgggaggctgaggtg---ggcagat-cacgaggtcagg--agtttgagaccg------gtctggccaac-ataatgaaatgctgtctctactaaaaatacaaaaaattagccaggcatggtggtgtgtg i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 5047023 272 - 5626091 agatctttgatcgatatttctaaattgttcttaagaaagtttatattaatttataattcaatcaacagggtataaaaTAGATA-TTTTCTTTATCCAGAATAATTATTTTAAAAATTATCAgtcgggtgcggtggctcacgcctgtaatcccagcacttcgggaggctgaggtg---ggcagat-cacaaggtcagg--agtttgagacca------gtctggccaac-ataatgagatgctgtctctactaaaaatacaaaaaattagccagacgtggtg--gtgtg i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 16526249 267 + 107702431 agatatttgatcaatatttctaaattgttcttaagaaagt-----ttaatttataattcaatcaacagggtataaaaTAGATA-TTTTCTTTATCCAGAATAATTATTTTAAAAATTATCAgtcgggtgcggtggctcacgcctgtcatcccagcacttcgggaggctgaggtg---ggcagat-cacgaggtcagg--agtttgagacca------gtctggccaac-ataatgaaatgctgtctctactaaaaatacaaaaacttagccaggcgtggtg--gtgtg i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 333663 272 - 409142 agatctttgatcaatatttctaaattgttcttaagaaagtttatattaatttataattcaatcaacagggtataaaaTAGATA-TTTTCTTTATCCAGAATAATTATTTTAAAAATTATCAATcgggtgcggtggctcacgcctgtaatcccagcacttcgggaggctgaggtg---ggcagat-cacgaggtcagg--agtttgagacca------gtctggccaac-ataatgaaatgctgtctctactaaaaatacaaaaaattagccaggcgtggtg--gtgtg i manLeu1.NW_012101154v1 C 0 I 1 s calJac3.chr14 14830885 273 + 108792865 agatctttgatcaatgtttctaaattgttcttaagaatgtttatattaatttataattcaatcaacagagtatgaaaTAGGTATTTTTCTCTTCCCAGAACAATTATTTAAAAAATTACTggccaggtgtggtgtttcatgcctgtaatcccaacacttttggaggctgaggca---ggtgtat-cacaaggtcagg--agtctgagatca------gtctggccaac-atagtgaaaccccatctctactaaaaatacaaaaagttagctgggtgtggtg--gtgtt i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27270994 273 - 28799539 aggtctttgatcagtgtttctaaattgttcttaagaatatttatattaatttataattcaatcaacagagtatgaaaTAGATATTTTTCTCTTTCCAGAACAATTATTTTTAAAATTATTggccaggtgtggtggttcatgcctgtaatcccaacactttgggaagctgaggca---ggtgtgt-cacaaggtgagg--agttcaagatca------gtctggccaac-atagtgaaaccccatctctactaaaaatacaaaaaattagctgggtgtggtg--gtgtt i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 92361 273 - 3620821 agatctttgatcagtgtttctaaattgttcttaagaatgtttatattaatttataattcaatcaacagagtatgaaaTAGATATTTTTCTCTTTCCAGAATAATTATTTAAAAAATTATTggccaggtgtggcagttcatgcctgtaatcccaacactttgggaagctgaggca---ggtgtat-cacaaggtcagg--agttcaagatca------gtctggccaac-atagtgaaaccccatccctactaaaaatacaaaaaattagctgggtgtggtg--gtgtt i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19668316 252 - 27850971 agatctttgattaatattttaaaattattctcaagaaagtttata-taatttataattctacccatagagtatgaaatggctatttTTTGGAAGCCACAATGATTTTTAGAAAAAAAATTA--TAggctcag-------cacctatagtc----------aagtggctaaggcgccagccatatacaccagagctggcagatttgaattcagcccaggcctgccaaacaacaatga----------caactaca---atcaaaaagtagccgggcattgtg--gcgg- i otoGar3.GL873538 I 124 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=507.000000 s hg38.chrUn_KI270746v1 32177 1 + 66486 a s panPan2.chr2A 89841179 1 + 114371477 c i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857334 1 - 998796 c i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47853539 1 + 94967081 c i nomLeu3.chr14 C 0 C 0 s calJac3.chr14 14831158 1 + 108792865 c i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27271267 1 - 28799539 c i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 92634 1 - 3620821 c i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19668568 1 - 27850971 t i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e manLeu1.NW_012101154v1 333935 1 - 409142 I e chlSab2.chr14 16526516 1 + 107702431 I e cerAty1.NW_012001187v1 5047295 1 - 5626091 I e macNem1.NW_012014799v1 10557937 1 - 11597128 I e rheMac8.chr13 108555504 1 + 108979918 I e macFas5.chr13 17692280 1 + 111193037 I a score=290230.000000 s hg38.chrUn_KI270746v1 32178 37 + 66486 acctgtaatcccagctactcaggaggctgaggcagga s panPan2.chr2A 89841180 37 + 114371477 acctgtaatcccagctactcaggaggctgaggcagga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857335 37 - 998796 acctgtaatcccagctactcaggaggctgaggcagga i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47853540 37 + 94967081 acctgtaatcccagctactcaggaggctgaggcagga i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108555505 37 + 108979918 acctgtaatcccagctactcaggaggctgaggcagga i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17692281 37 + 111193037 acctgtaatcccagctactcaggaggctgaggcagga i macFas5.chr13 I 1 C 0 s macNem1.NW_012014799v1 10557938 37 - 11597128 acctgtaatcccagctactcaggaggctgaggcagga i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 5047296 37 - 5626091 acctgtaatcccagctactcaggaggctgaggcagga i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 16526517 37 + 107702431 acctgtaatcccagctactcaggaggctgaggcagga i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 333936 37 - 409142 acctgtaatcccagctactcaggaggctgaggcagga i manLeu1.NW_012101154v1 I 1 C 0 s calJac3.chr14 14831159 37 + 108792865 gcctgtaatctgagctactcgggagactgaggcagga i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27271268 37 - 28799539 acctgtaatccgagctactcggggtactgaggcagga i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 92635 37 - 3620821 gtctgtaatccgagctactcgggagactgaggcagga i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19668569 37 - 27850971 gcctgtgatcccagctacttgggaggctgaggcaaga i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=31580.000000 s hg38.chrUn_KI270746v1 32215 5 + 66486 gaatc s panPan2.chr2A 89841217 5 + 114371477 gaatc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857372 5 - 998796 gaatc i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47853577 5 + 94967081 gaatc i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108555542 5 + 108979918 gaatc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17692318 5 + 111193037 gaatc i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10557975 5 - 11597128 gaatc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5047333 5 - 5626091 gaatc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16526554 5 + 107702431 gaatc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 333973 5 - 409142 gaatc i manLeu1.NW_012101154v1 C 0 C 0 s rhiRox1.KN297096v1 27954 3 - 48936 aAA-- i rhiRox1.KN297096v1 N 0 N 0 s calJac3.chr14 14831196 5 + 108792865 aaatc i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27271305 5 - 28799539 aaatc i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 92672 5 - 3620821 aaatt i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19668606 5 - 27850971 gaatt i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=449232.000000 s hg38.chrUn_KI270746v1 32220 84 + 66486 acataaacctgggaggcagaggttgcagtgagccaaaattgcaccattgcactgcagcccagtgatagtatgagactccctcgc s panPan2.chr2A 89841222 84 + 114371477 atgtgaacctgcgaggcagaggttgcagtgagccgagattgcaccattgcactccagcccagcaatagtacgagactccctctc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857377 83 - 998796 gcatgaacctgggaggcagaggttgcagtgag-cgagattgcaccattgcactccagcccagcgatagtacaagactccctctc i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47853582 84 + 94967081 acgtgaacctgggaggcagaggttgcagtgagccgagattgcaccattgcactccagcccagcgatagtatgagactccctctc i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108555547 84 + 108979918 ccatgaacctgggaggcggaggttgcagtgagctgagattgcaccattgcactctagcccagtgatagtgtgagactccctgtc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17692323 84 + 111193037 ccatgaacctgggaggcggaggttgcagtgagctgagattgcaccattgcactctagcccagtgatagtgtgagactccttgtc i macFas5.chr13 C 0 I 4 s macNem1.NW_012014799v1 10557980 84 - 11597128 ccatgaacctgggaggcggaggttgcagtgagctgagattgcaccattgcactctagcccagtgatagtgcgagactcctggtc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5047338 84 - 5626091 ccatgaacctgggaggcagaggttgcaatgagctgagattgcaccattgcactctagcccagtgacagtgcgagactccctgtc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16526559 84 + 107702431 ccatgaacctgggaggcggaggttgcagtgagctgagattgcaccattgcactctagcccagtgatagtgcgagactccctgtc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 333978 84 - 409142 ccatgaacctgggaggcggaggttgcagtgagctgagattgcaccattgcactctagcccagtgatagtgcgagactccctgtc i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14831201 62 + 108792865 gcatgaatccaggaggtggaggtttcagtgagccaagattgtgccattgc----------------------agactccCTCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27271310 62 - 28799539 gcatgaatccaggaggtggaggttgcagtgagccgagatcgtgccattgc----------------------aGACTCTCTCTC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 92677 62 - 3620821 gcatgaatccaggaggtggaggttgcagtgagccgagatcatgccattgc----------------------agactccCTCTC i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19668611 74 - 27850971 gcttaagcctaggagttggaggttgctgtgagctgtgat---gccacggcactctaccc-------agcgtgaggctctgtctt i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103944360 1510 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=4664.000000 s hg38.chrUn_KI270746v1 32304 1 + 66486 a s panPan2.chr2A 89841306 1 + 114371477 a i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857460 1 - 998796 a i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47853666 1 + 94967081 a i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108555631 1 + 108979918 a i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17692411 1 + 111193037 a i macFas5.chr13 I 4 C 0 s macNem1.NW_012014799v1 10558064 1 - 11597128 a i macNem1.NW_012014799v1 C 0 C 0 s nasLar1.chr13 103945870 1 + 126811233 a i nasLar1.chr13 I 1510 I 1184 s calJac3.chr14 14831263 1 + 108792865 A i calJac3.chr14 C 0 I 3 s saiBol1.JH378124 27271372 1 - 28799539 A i saiBol1.JH378124 C 0 I 3 s cebCap1.NW_016107537v1 92739 1 - 3620821 G i cebCap1.NW_016107537v1 C 0 I 3 s otoGar3.GL873538 19668685 1 - 27850971 a i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e manLeu1.NW_012101154v1 334062 0 - 409142 C e chlSab2.chr14 16526643 0 + 107702431 C e cerAty1.NW_012001187v1 5047422 0 - 5626091 C a score=568085.000000 s hg38.chrUn_KI270746v1 32305 93 + 66486 ---aaaaaaaaaa------------aaaaaGG-A---ATCCAGTTTTATTCTTAATATGCAGGGAATAAAAAGTAAAATAGAAAGTGATTACTGATTAGCTTATTCAACATC s panPan2.chr2A 89841307 94 + 114371477 ---aaaaaaaaaa------------aaaaaaTTA---ATCCAGTTTTATTCTTAATATGCAGGGAATAAATAGTAAAATGGAAGGTGATTACTGATTAGCTTATTCAACATC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857461 96 - 998796 ---aaaaaaaaaa------------aaaaaaa-aaaTATCCAGTTTTATTCTTAATATGCAGGGAATAAAAAGTAAAATGGAAAGTGATTACTGATTAGCTTATTCAACATC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47853667 92 + 94967081 ---aaaaaaaaaa------------aaaaaTT-----ATCCAGTTTTATTCTTAATATGCAGGGAATAAAAAGTAAAATGGAAAGTGATTACTGATTAGCTTATTCAACATC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108555632 96 + 108979918 ---aaaaaaaaaa------------aaaaaaa-aaTTATCCAGTTTTATTCTTAATATGCAGGGAATAAAAAGTAAAATGGAAAGTGTTTACTGATTAGCTTATTCAACATC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17692412 93 + 111193037 ---aaaaaaaaaa------------aaaaaaa-a---aTCCAGTTTTATTCTTAATATGTAGGGAATAAAAAGTAAAATGGAAAGTGTTTACTGATTAGCTTCTTCAACATC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10558065 93 - 11597128 ---aaaaaaaaaa------------aaaaaaa-a---aTCCAGTTTTATTCTTAATATGTAGGGAATAAAAAGTAAAATGGAAAGTGTTTACTGATTAGCTTCTTCAACATC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5047422 93 - 5626091 ---aaaaaaaaaa------------aaaaaaT-T---ATCGAGTTTTATTCTTAATATGCAGGGAATAAAAAGTAAAATGAAAAGTGTTTACTGATTAGCTTATTCAACATC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16526643 105 + 107702431 ---aaaaaaaaaaaaaaaaacaaacaaaaaaT-T---ATCCAGTTTTATTCTTAACATGCAGCGAATAAAAAGTAAAATGGAAAGTGTTTACTGATTAGCTTATTCAACATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 334062 93 - 409142 ---aaaaaaaaaa------------aaaaaaT-T---ATCCAGTTTTATTCTTAATATGCAGGGAATAAAAAGTAAAATGGAAAGTGTTTACTGATTAGCTTATTCAACATC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14831267 89 + 108792865 ---AATAAACAAA------------CAAAAAT-T---ATC--ATTTTATTCTTAATATGCAGGGAATAAAAAGTAAAATGGAAAGTGATTACTGATTAGCTTATTCATCG-- i calJac3.chr14 I 3 C 0 s saiBol1.JH378124 27271376 79 - 28799539 ---AATAAACCAA------------CAAAAAT-T---ATC--ATTTTATTCTTAATATGCAGGGAATAAAAAGTAAAATGGAAAGTGATTACTGATCATC------------ i saiBol1.JH378124 I 3 C 0 s cebCap1.NW_016107537v1 92743 89 - 3620821 ---AATAAACAAA------------CAAAAAT-T---ATC--ATTTTATTCTTAATATGCAAGGAATAAAAAGTAAAATGGAAAGTGATTACTGATTAGCTTATTCATCA-- i cebCap1.NW_016107537v1 I 3 C 0 s otoGar3.GL873538 19668686 96 - 27850971 aaaaaaaaaaaga------------aaaaTAT-T---ATACAGGTTTATTCTTAATATGCATAAAGTAAAAATTAAGTTAGAAAGTGATTACTGATTAGTTTATTCAACATC i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103945871 1184 + 126811233 I e ponAbe2.chr2a_random 11210082 1640 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=-22781.000000 s hg38.chrUn_KI270746v1 32398 4 + 66486 TCT-------------------G s panPan2.chr2A 89841401 23 + 114371477 TCTCTCATCTCTTATTCAACATA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857557 14 - 998796 TCTCTCTCTTTTC---------A i gorGor5.CYUI01015730v1 C 0 C 0 s ponAbe2.chr2a_random 11211722 4 + 13868332 ---------GCTG---------- i ponAbe2.chr2a_random I 1640 I 410 s nomLeu3.chr14 47853759 4 + 94967081 ---------TCTG---------- i nomLeu3.chr14 C 0 C 0 s calJac3.chr14 14831356 2 + 108792865 ---------TC------------ i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27271455 2 - 28799539 ---------TC------------ i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 92832 4 - 3620821 -------TCTC------------ i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19668782 2 - 27850971 ---------TT------------ i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103945871 1184 + 126811233 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e manLeu1.NW_012101154v1 334155 0 - 409142 C e chlSab2.chr14 16526748 0 + 107702431 C e cerAty1.NW_012001187v1 5047515 0 - 5626091 C e macNem1.NW_012014799v1 10558158 0 - 11597128 C e rheMac8.chr13 108555728 0 + 108979918 C e macFas5.chr13 17692505 0 + 111193037 C a score=2698098.000000 s hg38.chrUn_KI270746v1 32402 410 + 66486 TCTCTGCTATGTAGATAAAATTAATTC--AGTTTTATGCTGAAGACATGTATTATTCTTTATTATTTAATTAAATATTAGATCTTGTGTTGTTCCAAAACATATTTTAAAATTGGTTATAAAATACATACTAATCAACAGGATAGACTGGAAGTGTTACCC-AAAAAACAATCTTAAAAAGTGTA--GGGTAACATATTACATTCTTAACCTAGTCTTGGATTACAATAATCTGT--AGATATGTTTCAT-AAAGACATC-AAAAATACTATCTTACAATATAAATTATGTTTAGGGATACTTGCAATGAATGTTTCATGAAGATGAAAATGTATTTCTAGTGAATGTATCAACTTGTTTATAAAAAGTAACTTTATG----TTAATTAACT--AAATGATTCATCCTAACTGAGGAGTAATTAC--- s panPan2.chr2A 89841424 414 + 114371477 TCTCTGCTATGTAGATAAAATTAGTTC--AGTTTTATGCTGAAGACATGTATTATTCTTTATTGTTTAATTAAATATTAGATCTTGTGTTGTTCCAAAACAGATTTCAAAGTTGGTTATAAAATACATACTAATCAACAGGATAGACTGAAAGTGTTACCC-AAAAAACAATCTTAAAAAGTGTA--GGGTAACATATTACATTCTTAACCCCATCTTGGATTACAGTAATCTGCTGATATATGTTTCAT-AAAGACATC-GAAAATGCTATCTTACAATGTAAATTATGTTTACGGATACTTGGAATGAATGTTTCATGAAGATGAAAATGTATTTCTAGTGAATGCATCAACTTGTTTATAAAAAGTAACTTTATG----TTAATTAACTCTAAATGATTCATCCTAATTGAGGAGTAATTAC--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857571 411 - 998796 TCTCTGCTATGTAGATAAAATTAGTTC--GGTTTTATGCTGAAGACATGTATTATTCTTTA-TGTTTAATTAAATATTAGATCTTGTGTTGTTCCAAAACAGATTTTAAA-TTGGTTAT-AAATACATACTAATCAACAGGATAGACTGAAAGTGTTACCC-AAAAAACAATCTTAAAAAGTGTA--GGGTAACATATTACATTCTTAACCTCATCTTGGATTACAGTAATCTGCTGATATATGTTTCAT-AAAGACATC-AAAAATGCTATCTTACAATGTAAATTATGTTTAGGGATACTTGGAATGAATGTTTCATGAAGATGAAAATGTATTTCTAGTGAATGCATCAGCTTGTTTATAAAAAGTAACTTTATG----TTAATTAACTCTAAATGATTCATCCTAATTGAGGAGTAATTAC--- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47853763 414 + 94967081 TCTCTGCTATGTAGATAAAATTAATTC--AGTTTTATGCTGAAGACATATATTATTCTTTATTGTTTAATTAAATATTAGATCTTGTGTTGTTCCAAAATAGATTTTAAAATTGGTTATAAAATACATACTAATCAACAGGATAGACCGAAAGTGTTACCC-AAAAAACAATCTTAAAAAGTGTA--GGGTAACATATTACATTCTTAACCTAGTCTTGGATTACAGTAATCTGCTGATAAATGTTTCAT-GAAGACATC-GAAAATGCTATCTTACAATGTAAATTATGTTTAGGGATACTTGAAATGAATATTTCATGAAGATGAAAATGTATTTCTAGTGAATGTATCAACTTGTTTATAAAAAGTAACTTTATG----TTAATTAACTCTAAATGATTCATCCTAATTGAGGAGTAATTAC--- i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108555728 417 + 108979918 CCTCTGCTATGTAGATAAAATTAATTCAAAGTTTTATGCTGAAGACACGTATTATTCTTTATTGTTTAATTAAATATTAGATCTTGTGTTGTTCCAAAACAGATTTTAAAATTGTTTATAAAATACATACTAATCAACAGGATAGATTGAAAGTGTTGCCC-AAAAAACAATCTTAAAAAGTGTAGGGGGTAACATATTACATTCTTAACCTAGTCTTGGATTACACTAATCTGCTGATATATATTTCAT-AAACACATC-AAAAGTGCTATCTTACAATGTAAATTA-GTTTAGGGATACTTGCAATGAATGTTTCATGAAGGTGGAAATATATTTCTAGTGAATGTATTAACTTGTTTATAAAAAGTTACTTTATG----TTAATTAACTCTAAACGATTCATCCTAATTGAAAAGTAATTAC--- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17692505 417 + 111193037 CCTCTGCTATGTAGATAAAATTAATTCAAAGTTTTATGCTGAAGACACGTATTATTCTTTATTGTTTAATTAAATATTAGATCTTGTGTTGTTCCAAAACAGATTTTAAAATTGTTTATAAAATACATACTAATCAACAGGATAGATTGAAAGTGTTGCCC-AAAAAACAATCTTAAAAAGTGTAGGGGGTAACATATTACATTCTTAACCTAGTCTTGGATTACACTAATCTGCTGATATATATTTCAT-AAACACATC-AAAAGTGCTATCTTACAATGTAAATTA-GTTTAGGGATACTTGCAATGAATGTTTCATGAAGGTGGAAATATATTTCTAGTGAATGTATCAACTTGTTTATAAAAAGTTACTTTATG----TTAATTAACTCTAAACGATTCATCCTAATTGAAAAGTAATTAC--- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10558158 417 - 11597128 CCTCTGCTATGTAGATAAAATTAATTCAAAGTTTTATGCTGAAGACACGTATTATTCTTTATTGTTTAATTAAATATTAGATCTTGTGTTGTTCCAAAACAGATTTTAAAATTGTTTATAAAATACATACTAATCAACAGGATAGATTGAAAGTGTTGCCC-AAAAAACAATCTTAAAAAGTGTAGGGGGTAACATATTACATTCTTAACCTAGTCTTGGATTACACTAATCTGCTGATATATATTTCAT-AAACACATC-AAAAGTGCTATCTTACAATGTAAATTA-GTTTAGGGATACTTGCAATGAATGTTTCATGAAGGTGGAAATATATTTCTAGTGAATGTATCAACTTGTTTATAAAAAGTTACTTTATG----TTAATTAACTCTAAACGATTCATCCTAATTGAAAAGTAATTAC--- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5047515 418 - 5626091 CCTCTGCTATGTAGATAAAATTAATTCAAAGTTTTATGCTGAAGACACGTATTATTCTTTATTGTTTAATTAAATATTAGATCTTGTGTTGTTCCAAAACAGATTTTAAAATTGTTTATAAAATACATACTAATCAACAGGATAGATTGAAAGTGTTGCCCAAAAAAACAATCTTAAAAAGTGTAGGGGGTAACATATTACATTATTAACCTAGTCTTGGATTACACTAATCTGCTGATATATATTTCAT-AAACACATC-AAAAGTGCTACCTTACAATGTAAATTA-GTTTGGAGATACTTGCAATGAATGTTTCATGAAGGTGGAAATATATTTCTAGTGAATGTATCAACTTGTTTATAAAAAGTTACTTTATG----TTAATTAACTCTAAACGATTCATCCTAATTGAAAAGTAATTAC--- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16526748 417 + 107702431 TCTCTGCTATGTAGATAAAATTAATTCAAAGTTTTATGCTGAAGACACGTATTATTCTTTATTGTTTAATTAAATATTAGATCTTGTCTTGTTCCAAAACAGATTTTAAAATTGTTTATAAAATACATACTAATCAACAGGATAGATTGAAAGTTTTGCCC-AAAAAACAATCTTAAAAAGTGTAGGGGGTAACATATTACATTCCTAACCTAGTCTTGGATTACACTAATCTGCTGATATATATTTCAT-AAACACATC-AAAAGTGCTATATTACAATGTAAATTA-GTTTAGGGATACTTGCAATGAATGTTTCATGAAGGTGAAAATATATTTCTAGTAAGTGTATCAACTTGTTTATAAAAAGTTACTTTATG----TTAATTAACTCTAAACAATTCATCCTAATTGAAGAGTAATTAC--- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 334155 418 - 409142 CCTCTGCTATGTAGATAAAATTAATTCAAAGTTTTATGCTGAAGACACGTATTATTCTTTATTGTTTAATTAAATATTAGATCTTGTGTTGTTCCAAAACAGATTTTAAAATTGTTTATAAAATACATACTAATCAACAGGATAGATTGAAAGTGTTGCCCAAAAAAACAATCTTCAAAAGTGTAGGGGGTAACATATTACATTCTTAACCTAGTCTTGGATTACACTAATCTGCTGATATATATTTCAT-AAACACATC-AAAAGTGCTATCTTACAATGTAAATTA-GTTTAGGGATACTTGCAATGAATGTTTCATGAAGGTGGAAATATATTTCTAGTGAATGTATCAACTTGTTTATAAAAAGTTGCTGTATG----TTAATTAACTCTAAACGTTTCATCCTAATTGAAAAGTAATTAT--- i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14831358 401 + 108792865 TCTCTGCTACATAGATAAAATTAATTCAAGGTTCTATGCTGAAGACACATATCATTCTTTATTGCTTAATTAAATATTAGATCTTGTGTTGTTTTAAAACAGGTTTTAAAATTGTTTCTAAACTATATACTAATCAACAGGACAGGTTGAAAGTGTTACCC-AAAAA--AATCTTAAAAAGTGTA--GGGTAACATATTAGATTCTTAATCTAGTCTTGGATTACAGCAATCTGCCGATATATATTTCAT-AAAGACATCTGAAAGTGCTATCGTACAATGTAAATTA--------------TGCAATG----TTTCATGAAGATGAAAATTTCTTTCTAGTGAATGTATCAACTTATTTATAAAAAGTAACTTCATTTTAATTAGTTAACTCTAAATGATCCATTCTAATTGAGGAGTAATTAC--- i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27271457 410 - 28799539 TCTCTGCTACATAGATAAAATTAATTCAAAGTTCTATGCTGAAGACACTTA-------TTATTGTTTAATTAAATATTAGATCTTGTGTTGTTTTAAAACAGATTTTAAAATTGTTTATAAAATATATACTAATCAACAGGATAGGTTGAAAGTTTTACCC-AAAAAACAATCTTAAAAAGTGTA--GGGTAACATATTAGATTCTTAATCTAGTCTTGGATTACAGCAATGTGCTGATACATATTTCAT-AAAGACATCTGAAAGTGCTATTGTACAATGTAAATTATGCTAAGGGATACCTGCAAAG----TTTCACGAAGATGAAAATTTATTTCTAGTGAATGTATTAACTTATTTATAAAAAGTAGCTTCATTTTAATTAGTTAATTCTAAATGATCCATTCTAATTGAGGAGTAATTAC--- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 92836 413 - 3620821 TCTCTGCTACATAGATAAAATTAATTCAAAGTTCTATGCTGAAGACACATATTATTCTTTGTTGTTTAATTAAATATTAGATCTTGTGTTGTTTTAAAACAGATTTTAAAATTGTTTATAAAATATATACTAATCAACAGGATAGGTTGAAAGTGTTACCC-AAAAAACAATCTTAAAAAGTGTA--GGGTAACATACTAGATTCTTAATCTAGTCTTGGATTACAGCAATCTGCTGATATATATTTCAT-AAAGACATCTGAAAGTGCTATCGTACAATGTAAATTATGCTAAGGGAAACCTGCAATG----TTTCATGAAGATGAAAATTTATTTCTAGTGAATGTATCGACTTATTTATAAAAAGTAACTTCATT----TTAGTTAACTCTAAATAATCCATTCTAATTGAGGAGTAATTAC--- i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19668784 408 - 27850971 TCTCTACCATACAAGTAAA---AGTTCAGCATTCTATA-TCAAAAGACACATTATTCTTTATTGTTTCATTAAATATTGG-------CTTGTTCCAAAAGAGAGTTCATAA-TGCTTATAAAATATATAATAATCAAGAAGAGAATTTGAAAGTGATACCT-AAAAAAGAAACATAGAAAGTTGA---GGTAACAGGTGTTACACTTAGCCTAGTTTTGGATTATAGTAATATACAGATAGGTGTGGTATGAAAGACATCTGGAGGTGCTATCTTACATTGTAAATCATTTTTAGGGATACCTGAAATA----GTTAAAGAAGATGAAAATTTATTTCTAGAGAATTTGTAAACTTGTCAATAAATGGCATCTTCTTTTTAACTAGTTAACTCTAAACACTATATCCAAATTGAGGTATAATTATGAC i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103945871 1184 + 126811233 I e ponAbe2.chr2a_random 11211726 410 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=13031.000000 s hg38.chrUn_KI270746v1 32812 2 + 66486 TG s panPan2.chr2A 89841838 2 + 114371477 TA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857982 2 - 998796 TG i gorGor5.CYUI01015730v1 C 0 C 0 s ponAbe2.chr2a_random 11212136 2 + 13868332 TG i ponAbe2.chr2a_random I 410 I 1359 s nomLeu3.chr14 47854177 2 + 94967081 TG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108556145 2 + 108979918 TG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17692922 2 + 111193037 TG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10558575 2 - 11597128 TG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5047933 2 - 5626091 TA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16527165 2 + 107702431 TG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 334573 2 - 409142 TG i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27271867 2 - 28799539 TG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 93249 2 - 3620821 TG i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19669192 2 - 27850971 TA i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103945871 1184 + 126811233 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e calJac3.chr14 14831759 0 + 108792865 C a score=1420620.000000 s hg38.chrUn_KI270746v1 32814 207 + 66486 TGTG-AAGAAAAGATAATTTTTATCCTGTAACTTTACTGAATAATTTTCAACATC-CTTTTTCATACTATTTGCTGGAGTTACTAGTAACAGAAACTTAT------GCAGGTTGTTCTTTTATCAATACATTTCAACTTACACATGTCCTTTGGATGAGATTTAGGTGAGAAACTAAAAACATGAGAACTAGAAAGAAAAATAATATTTAAGAAC s panPan2.chr2A 89841840 207 + 114371477 TGTG-AAGAAAAGATAATTTTTATCTTGTAACTTTACTGAATAATTTTCAACATC-CTTTTTCATAATATTTGCTAGAGTTACTAGTAACAGAAACTTAT------GCAAGATGTTCTTTTATCAATACATTTCAACTTATACATGTCCTTTGGATGAAATTGAGGTGAGAAATTAAAAACATGAGAACTAGAAAGAAAAATAGTATTTAAGAAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 857984 203 - 998796 TGTG-AAGAAAAGATAATTTTTATCTTGTAACTTTACTGAATAATTTTCAACATC-CTTTTTCATAATCTATGCTAGAGTTACTAGTAACAGAAACTTAT------GCA-GATGTTCTTTTATCAATACATTTCAACTTATACATG-CCTTTGGATGAG-TTGAGGTGAGAAATT-AAAACATGAGAACTAGAAAGAAAAATAGTATTTAAGAAC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47854179 207 + 94967081 TGTG-AAGAAAAGATAATTTTTATCTTGTAACTTTACTGAATAATTTTCAACATC-CTTTTTCATAATATTTGCTAGAGTTACTAGTAACAGAAACTTAT------GCAGGATGTTCTTTTATCAATACATTTCAACTTATACATGTCCTTTGGATGAGATTGAGGTGAGAAATTAAAAACATGAGAACTAGAAAGAAAAATAGTATTTAAGAAC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108556147 207 + 108979918 TGTG-AAGAAAAGGTAATTTTTATCTTGTAACTTTACTGAATAATTTTCAGCATC-TTTTTTCGTAATATTTGCTAGAGTTACAAGTAACAGAAACTTAT------GCAGGGTGTTCTTTTGTCAGTACATTTCAACTTATACATGTCCTTTGGATGAGATTGAGGTGAGAAATTAAAAACATGAGAACTAGAAAGAAAAATAGTATTTAAGAAC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17692924 208 + 111193037 TGTG-AAGAAAAGGTAATTTTTATCTTGTAACTTTACTGAATAATTTTCAGCATCTTTTTTTTGTAATATTTGCTAGAGTTACAAGTAACAGAAACTTAT------GCAGGGTGTTCTTTTGTCAGTACATTTCAACTTATACATGTCCTTTGGATGAGATTGAGGTGAGAAATTAAAAACATGAGAACTAGAAAGAAAAATAGTATTTAAGAAC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10558577 207 - 11597128 TGTG-AAGAAAAGGTAATTTTTATCTTGTAACTTTACTGAATAATTTTCAGCATC-TTTTTTCGTAATATTTGCTAGAGTTACAAGTAACAGAAACTTAT------GCAGGGTGTTCTTTTGTCAGTACATTTCAACTTATACATGTCCTTTGGATGAGATTGAGGTGAGAAATTAAAACCATGAGAACTAGAAAGAAAAATAGTATTTAAGAAC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5047935 207 - 5626091 TGTG-AAGAAAAGGTAATTTTTATCTTGTAACTTTACTGAATAATTTTCAGCATC-TTTTTTCGTAATATTTGCTAGAGTTACAAGTAACAGAAACTTAT------GCAGGGTGTTCTTTTGTCAGTACATTTCAACTTATACATGTCCTTTGGATGAGATTGAGGTGAGAAATTAAAAACATGAGAACTAGAAAGAAAAATAGTATTTAAGAAC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16527167 207 + 107702431 TGTG-AAGAAAAGGTAATTTTTATCTTGTAACTTTACTGAATAATTTTCAGCATT-TTTTTTCGTAATATTTGCTAGAGTTACTAGTAACAGAAACTTAT------GCAGGATGTTCTTTTGTCAGTACATTTCAACTTATACATGTCCTTTGGATGAGATTGAGGTGAGAAATTAAAAACATGAGAACTAGAAAGAAAAATAGTGTTTAAGAAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 334575 207 - 409142 TGTG-AAGAAAAGGTCATTTTTATCTTGTAACTTTACTGAATAATTTTCAGCATC-TTTTTTCGTAATAGTTGGTAGAGTTACACGTATCAGAAACTTGT------GCAGGGTGTTCTTTTGTCAGTACATTTCAACTTATACATGTCCTTTGGATGAGATTGAGGTGAGAAATTAAAAACATGAGAACTAGAAAGAAAAATAGTATTTAAGAAC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14831759 213 + 108792865 TGTG-AAAATAAGGTAATTTTTATCTTGCAACTTTACTGAATAATTTTCAACATC-CTTTTTAATAATATTTGCTAGAGTTACTAGTAACAGAAACTTACAGGTTAGCAGGATGTTCTTTTATCAATACACTTCAAATTAAACATGTCCTTTGGATGAGATTGAGGTGAGAAATTAAAAACTTGAGAACTAAAAAGAAAAATAATATTTAAGAAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27271869 213 - 28799539 TGTG-AAAAAAAGGTAATTTTTATCTTGCAACTTTACTGAATAATTTTCAACATC-CTTTTTAATAATATTTACTAAAGTTACTAGTAACAGAAACTTACAGATTAGCAGGATGTTCTTTTATCAGTATACTTCAATTTATACATGTCCTTTGGATGAAATTGAGGTGAGAAATTAAAAACATAAGAACTAGAAAGAAAAATAATATTTAAGAAC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 93251 211 - 3620821 TGTGAAAAAAAAGGTAATTTTTATCTTGCAACTTTACTGAATAATTTTCAACATC-CTTTTTAATAATATTTGATAAAGTTACTAGTAACAGAAACTTACAGATTTGCAGGATGTTCTTTTATCAATACACTTCAATTTATACATGTCCTTTGGATGAGATTGAGGTGAGAAATTAAAAACATGAAAACTAGAAAGAAA---AATATTTAAGAAC i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19669194 204 - 27850971 TGCG-GGAAAAAG------TGTACTTTTCAACTTAACTGAATAATTTCTAGGATT-ATCCTTTTCCATGTTTACAGGAGTTACTAGTAACAGAAACTTATGAATTAGCAGAATGTTCTTTTTTCAGTATTTTTGTA-GTATCTAGGTCCTTTGAAGGAGATTGAAGTAAGAAATTAAAAACCTAAGAAGTAGGAAGGAAA--AATGTTTAAGAAC i otoGar3.GL873538 C 0 I 548 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103945871 1184 + 126811233 I e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=2688621.000000 s hg38.chrUn_KI270746v1 33021 443 + 66486 ATAGAAATTTCTTTAGGATAATAAACCAACATACGAATG-----TTTTCTAAtatcaacaaagagagtcaaactctgtaagatatttgaagagatttattctgagccaaatatgagtgactgtggcccctgacacagccctcagg----------------------aggtcctgagaacatgttcccaaggtggtcggggcgcagcttggttttattcattttagggaggcatgagacatcaatcaaatacatttaagaaatacattggtttggttcagaaaggcaggccaactcaaagctggggtttccaggctataggtaaatttaaacattttctcg-------ttgacaattggttgagtttatttgaagagctgggattaatggaaagaaatgttcaggttaagataaatgat--tgtggagacctagttttattgtgcagagaaatctctcagcagacttcagagag------agca-g s panPan2.chr2A 89842047 449 + 114371477 ATAGAAACTTTATTAGGATAATAAACCAACGTATGAATGTTTTATTTTCTAAtatcaacaaagagagtcaaactctgtaagatatttgaagagatttattctgaaccaaatatgagtgaccgtagcccccgacacagccctcagg----------------------aggtcctgagaacatgtgcccaaggtggtcagggcgcagcttagttttatacattttagagaggcatgagacatcagtcaaatacatttaagaaatacattggtttggttcagaaaggcaggccaactcaaagctggggcttccaggctataagtaaatttaaacattttctgg-------ttgacaattggttgagtttatttgaagacctgggattaatggaaagaaatgttcaggttaagataaatgat--tgtggggaccaagttttattgtgcagaggaatctctcagcagacttcagagag------agcagg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 858187 450 - 998796 ATAGAAACTTTATTAGGATAATAAACCAACGTATGAATGTTTTATTTTCTAATATCAacaaagagagtcaaactctgtaagatatttgaagagatttattctgaaccaaatatgagtgaccgtggcccccgacacagccctcagg----------------------agatcctgagaacatgtgcccaaggtggtcagggtgcagcttagttttgtacattttagaga-gcatgagacatcaatcaaatacatttaagaaatacattggtttggttcagaaaggcaggccaactcaaagctggggcttccaggctataggtaaatttaaacattttctgg-------ttgacaattggttgagtttatttgaagacctgggattaatggaaagaaatgttcaggttaagataaatgattgtgtggggaccaagttttattgtgcagaggaatctctcagcagacttcagagag------agcagg i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47854386 449 + 94967081 ATAGAAACTTTATTAGGATAATAAACCAACGTATGAATGTTTTATTTTCTAATATCAacaaagagagtcaaactctgtaagatatttgaagagatttattctgagccaaatatgagtgaccgtggcccccgacacagccctcagg----------------------aggtcctgagaacatgtgcccaaggtggtctgggcgcagcttggttttattcattttagagaggcatgagacatcaatcaaatacatttaagagatacattggtttggttcagaaagtcaggccaactcaaagctggggcttccaggctataggtaaatttaaacattttctgg-------ttgataattggttgagtttatttgaagagctgggattaatggaaagaaatgttcaggttaagataaatgat--tgtggggaccaagtttcattgtgcagaggaatctctcagcagacttcagagag------agcagg i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108556354 441 + 108979918 ATAGAAACTTTATTAGGATAATAAG-CAACATATGAATGTTTTATTTTCTAAtatcaacaaagatagtcaaactctgtaaaatatttgaagagatttattctgagccaaatatgagtgaccatggccactgacacagccctcagg----------------------aggtcctgagaacatgtgcccaag-------gggcgcagcttggttttatacattttagagaggcatgaaacatcaatcaaatacatttaaaaaatactttggtttggttcagaaaggcaggacaactgaaagcaggggcttccaggctatagataaatttaaacattttctgg-------ttgacaattggttgagtttatttgaagacctgggattaatggaaagaaatgttcaggttaaggtaaatgat--tgtggggaccaagttttcttgtgcagaggaatctctcagcagacttcagagag------agcagg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17693132 441 + 111193037 ATAGAAACTTTATTAGGATAATAAG-CAACATATGAATGTTTTATTTTCTAATATCAacaaagagagtcaaactctgtaaaatatttgaagagatttattctgagccaaatatgagtgaccatggccactgacacagccctcagg----------------------aggtcctgagaacatgtgcccaag-------gggcgcagcttggttttatacattttagagaggcatgaaacatcaatcaaatacatttaaaaaatactttggtttggttcagaaaggcaggacaactgaaagcaggggcttccaggctatagataaatttaaacattttctgg-------ttgacaattggttgagtttatttgaagacctgggattaatggaaagaaatgttcaggttaaggtaaatgat--tgtggggaccaagttttcttgtgcagaggaatctctcagcagacttcagagag------agcagg i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10558784 441 - 11597128 ATAGAAACTTTATTAGGATAATAAG-CAACATATGAATGTTTTATTTTCTAATATCAacaaagagagtcaaactctgtaaaatatttgaagagatttattctgagccaaatatgagtgaccatggccactgacacagccctcagg----------------------aggtcctgagaacatgtgcccaag-------gggcgcagcttggttttatacattttagagaggcatgaaacatcaatcaaatacatttaaaaaatactttggtttggttcagaaaggcaggacaactgaaagcaggggcttccaggctatagataaatttaaacattttctgg-------ttgacaattggttgagtttatttgaagacctgggattaatggaaagaaatgttcaggttaaggtaaatgat--tgtggggaccaagttttcttgtgcagaggaatctctcagcagacttcagagag------agcagg i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5048142 441 - 5626091 ATAGAAACTTTATTAGGATAATAAG-CAACATATGAATGTTTTATTTTCTAATATCAacaaagagagtcaaactctgtaaaatatttgaagagatttattctgagccaaatatgagtgaccatggccactgacacagccctcagg----------------------aggtcctgagaacatgtgcccaag-------gggcgcagcttggttttatacattttagagaggcatgaaacatcaatcaaatacatttaaaaaatacattggtttggttcagaaaggcaggacaactgaaagcaggggcttccaggctatagataaatttaaacattttctgg-------ttgacaattggttgagtttatttgaagacctgggattaatggaaagaaatgttcaggttaaggtaaatgat--tgtggggaccaagttttcttgtgcagaggaatctctcagcagacttcagagag------agcagg i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16527374 464 + 107702431 ATAGAAACTTTATTAGGATAATAAGCCAACATATGAATGTTTTATTTTCTAATATCAacaaagagagtcaaactctgtaaaatatttgaagagatttattctgagccaaatatgagtgaccatggccactgacacagccctcaggaggtcctgagaacatgtgcccaaggtcctgagaacatgtgcccaag-------gggcgcaacttggttttatacattttagagaggcatgaaacatcaatcaaatacatttaagaaatacattggtttggttcagaaaggcaggacaactcaaagcaggggcttccaggctatagataaatttaaacattttctgg-------ttgacaattggttgagtttatttgaagacctgggattaatggaaagaaatgttcaggttaaggtaaatgat--tgtggggaccaagttttcttgtgcagaggaatctctcagcagacttcagagag------agcagg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 334782 441 - 409142 ATAGAAACTTTATTAGGATAATAAG-CAACATATGAATGTTTTATCTTCTAATATCAacaaagagagtcaaactctgtaaaatatttgaagagatttattctgagccaaatatgagtgaccatggccactgacacagccctcagg----------------------aggtcctgagaacatgtgcccaag-------gggcgcagcttggttttatacattttagagaggcatgaaacatcaatcaaatacatttaaaaaatacattggtttggttcagaaaggcaggacaactgaaagcaggggcttccaggctatagataaatttaaacattttctgg-------ttgacaattggttgagtttatttgaagacctgggattaatggaaagaaatgttcaggttaaggtaaatgat--tgtggggaccaagttttcttgtgcagaggaatctctcagcagacttcagagag------agcagg i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14831972 413 + 108792865 ATAGAAACTTTATTAGGATAATAAAGCAACATATGAATGTTTTATTTTCTGGTATCAacaaaaagagtcaaactctgtaaaatatttgaagagatttattctgagccaaatatgagtgaccatggctcgtgacacagtcctcagg----------------------aggtcccaagaacatgtgaccaatgtggtcggggcacaacttagttttatacatttt-------------------------------------ttacattggtttggttcagaaagacgggacaactcaaagcagggac-tccaggctataggtaaatttaaacattttctgg-------ttgacgattggttgagtttatttgaagacctgggattaatggaaaggaatgttcaggttgagataaatgat--tgcgtgg---aagttttattttgcagaggaatctctcaacagatttcagaaagagagaaagcag- i calJac3.chr14 C 0 I 1404 s saiBol1.JH378124 27272082 417 - 28799539 ATAGAAACTTTATTAGGGTAATAAACCAACATATGAATGTTTTATTTTCTGGtatcaacaaaaagagtcacactttgtaaaatatttgaagaaatttactctgagccaaatatgagtgaccatggcccatgacacagccttcatg----------------------aggtcccaagaacatgtgcccaatatggtcggggtgcagcttagttttattcatttt-------------------------------------atacattggtttggttcagaaaggtgggacaactcaaagcagggactttcaggctataggtagatttaaacattttctgg-------ttgacgcttggttgagtttatttgaagacctgggattaatggacaggaatgttcaggttgagataaatgat--tgtggggaccaagttttattttgcagaggaatctctcagcagatttcagggagagagaaagcag- i saiBol1.JH378124 C 0 I 1 s cebCap1.NW_016107537v1 93462 424 - 3620821 ATAGAAACTTTATTAGGATAATAAACCAACATATGAATGTTTTGTTTTCTGAtatcaacaaaaagagtcaaactctgtaaaatatttgaagagatttattctgagccaaatatgagtgaccatggcccgtgacacagccctcagt----------------------gggtcccaagaacatgtgcccaatgtggtcggggtgcagcttagttttatacatttt-------------------------------------atacattggtttggttcagaatggtgggacaactcaaagcagggacttccaggctataggtaaatttaaacatttgctggttgacaattgacaattggttgagtttatttgaagacctgggattaatggaaaggaatgttcaggttgagataaatcat--tgtggggacaaagttttattttgcagaggaatctctcagcagatttcagagagagagaaagcag- i cebCap1.NW_016107537v1 C 0 I 1 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103945871 1184 + 126811233 I e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e otoGar3.GL873538 19669398 548 - 27850971 I a score=83689.000000 s hg38.chrUn_KI270746v1 33464 12 + 66486 ttgtaaaatgtt s panPan2.chr2A 89842496 12 + 114371477 ttgtaaaatatt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 858637 12 - 998796 ttgtaaaatatt i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47854835 12 + 94967081 ttgtaaaatgtt i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108556795 12 + 108979918 ttgtaaaatgtt i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17693573 12 + 111193037 ttgtaaaatgtt i macFas5.chr13 C 0 I 1 s macNem1.NW_012014799v1 10559225 12 - 11597128 ttgtaaaatgtt i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 5048583 12 - 5626091 ttgtaaaatgtt i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 16527838 12 + 107702431 ttgtaaaatgtt i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 335223 12 - 409142 ttgtaaaatgtt i manLeu1.NW_012101154v1 C 0 I 1 s calJac3.chr14 14833789 12 + 108792865 ttgtaaaatgtt i calJac3.chr14 I 1404 C 0 s saiBol1.JH378124 27272500 12 - 28799539 ttgtaaaatgtt i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 93887 12 - 3620821 ttgtaaaatgtt i cebCap1.NW_016107537v1 I 1 C 0 e rhiBie1.NW_016815150v1 880 2708 + 5816 I e nasLar1.chr13 103945871 1184 + 126811233 I e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e otoGar3.GL873538 19669398 548 - 27850971 I a score=9555.000000 s hg38.chrUn_KI270746v1 33476 1 + 66486 t s panPan2.chr2A 89842508 1 + 114371477 t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 858649 1 - 998796 t i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47854847 1 + 94967081 t i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108556808 1 + 108979918 t i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17693586 1 + 111193037 t i macFas5.chr13 I 1 C 0 s macNem1.NW_012014799v1 10559238 1 - 11597128 t i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 5048596 1 - 5626091 t i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 16527851 1 + 107702431 t i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 335236 1 - 409142 t i manLeu1.NW_012101154v1 I 1 C 0 s nasLar1.chr13 103947055 1 + 126811233 t i nasLar1.chr13 I 1184 I 467 s rhiBie1.NW_016815150v1 3588 1 + 5816 t i rhiBie1.NW_016815150v1 I 2708 N 0 s calJac3.chr14 14833801 1 + 108792865 t i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27272512 1 - 28799539 t i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 93899 1 - 3620821 t i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e otoGar3.GL873538 19669398 548 - 27850971 I a score=1876659.000000 s hg38.chrUn_KI270746v1 33477 322 + 66486 cttatcggaccc----aaaagggtgcctggctgttagctgattatcccctggatctgcatagaaaggaaggaaaacaaagggg-aaagggggtactctatagaatgtggatttttcccacaagagactttgcagggcaatttcaaggcatggcaaggaaatatattttggattaaatattttcttccttgtctcataatgttatgccagagtcagattgaaaagcaagtcacaatatacagggtcaaataaaacccatctgatgagaatccatggtttgtagagcatgactccctggaccccttaggtaggaatttgggcaagataa s panPan2.chr2A 89842509 322 + 114371477 cttatcagaccc----agaagggtgcctggctcttagctgattatcccctggatctgcatagaaaggaaggaaaacaaagggg-aaagggggttctctatagaatgtggatttttcccacaagagactttgcagggcaatttcaaggcatggcaaggaaatatattttggattagatattttcttccttgtctcataatgttatgccagagtcagattgaaaagcaagtcacaatatacagggtcaaatataacccatctgatgagaatccatggtttgtagggcatgacttcctggaccccttaggtaggaatttgggcaacataa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 858650 321 - 998796 cttatcagaccc----agaaaggtgcctggctcttagctgattatcccctggatctgcatagaaaggaaggaaaacaaagggg-aaagggggttctctatggaatgtggatttttcccacaagagactttgcagggcaatttcaaggcatggcaaggaaatatattttggattagatattttcttccttgtctcgtaatgttatgccagagtcagattgaaaagcaagtcacaatatacagggtcaaatataacccatctgatgagaatccatggtttgtagggcatgact-cctggaccccttaggtaggaatttgggcaacataa i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47854848 322 + 94967081 cttgtcggaccc----aaaagggtgcctggctcttagctgattatcccctggatctgcatagaaaggaaggaaaacaaagggg-aaagggggttctctatagaatgtggatttttcccacaagagactttacagtccagtttcaagtcatggcaaggaaatatattttggattaaatattttcttccttgtctcataatgttatgccagagtcagattgaaacgcaagtcacaatatacagggtcaaataaaacccttctgatgagaatccatggtttgtagggcatgactccctggaccccttaggtaggaatttgggcaagataa i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108556809 306 + 108979918 cttatgggaacttttaaaaagggtgcctggttcttagctgattgtctcctggatcttcatagaaaggaaggaaaacaagggggaaaagggggttctctatagaatgtggatttttcccacaagagactttgcagggcaatttcaaggtatggcaaggaaatatatttttgattaaatatttgcttccttgtctcataatgttatgccagagtcagattgaaaagcaagtcacaatatacggggtcaaataaaatccatctgatgagaatccatggt---------------------acctcttaggtaggaatttgcacaagataa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17693587 306 + 111193037 cttatgggaccttttaaaaagggtgcctggttcttagctgattgtctcctggatcttcatagaaaggaaggaaaacaaaggggaaaagggggttctctatagaatgtggatttttcccacaagagactttgcagggcaatttcaaggtatggcaaggaaatatatttttgattaaatatttgcttccttgtctcataatgttatgccagagtcagattgaaaagcaagtcacaatatacggggtcaaataaaatccatctgatgagaatccatggt---------------------accccttaggtaggaatttgcacaagataa i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559239 306 - 11597128 cttatgggaccttttaaaaagggtgcctggttcttagctgattgtctcctggatcttcatagaaaggaaggaaaacaaaggcgaaaagggggttctctatagaatgtggatttttcccacaagagactttgcagggcaatttcaaggtatggcaaggaaatatatttttgattaaatatttgcttccttgtctcataatgttatgccagagtcagattgaaaagcaagtcacaatatacggggtcaaataaaatccatctgatgagaatccatggt---------------------accccttaggtaggaatttgcacaagataa i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5048597 306 - 5626091 cttatgggaccttttaaaaagggtgcctggctcttagctgattgtctcctggatcttcatagaaaggaaggaaaacaaaggggaaaagggggttctctatagaatgtggatttttcccacaagagactttgcagggcaatttcaaggtatggcaaggaaatatatttttgattaaatatttgcttccttgtctcataatgttatgccagagtcagattgaaaagcaagtcacaatatacggggtcaaataaaatccatctgatgagaatccatggt---------------------accccttaggtaggaatttgcacaagataa i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16527852 306 + 107702431 cttatgggaccttttaaaaagggtgcctggctcttagctgattatctcctggatcttcacagaaaggaaggaaaacaaaggggaaaaggggcttctctatagaatgtggatttttcccacaagagactttgcagggcaatttcaaggtatggcaaggaaatatatttttgattaaatatttgcttccttgtctcataatgttatgccagagtcagattgaaaagcaagtcacaatatatggggtcaaataaaatccatctgatgagaatccatggt---------------------accccttaggtaggaatttgcacaagataa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335237 306 - 409142 cttatgggaccttttaaaaagggtgcctggctcttagctgattgtctcctggatcttcatagaaaggaaggaaaacaaaggggaaaagggggttctctatagaatgtgggcttttcccacaagagactttgcagggcaatttcaaggtatggcaaggaaatatatttttgattaaatatttgcttccttgtctcataatgttatgccagagtcagattgaaaagcaagtcacaatatacggggtcaaataaaatccatctgatgagaatccatggt---------------------accccttaggtaggaatttgcacaagataa i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14833802 320 + 108792865 cttatgggaccc----agaagggtgcctggctctttgttgattatctcctgaatctgcaaagaaaggaaagaaaataaagaga-taaggggattccctatagaatgtggctttttcctaaaagagactttgcagggcaatttcaaggcatggcaaagaagtatatttt-gattaaaattttttttccttatctcataatgttatgccagagtcagattgaaaagcaagtcacaatgtacagggtcaaataaaaccaatctgatgagaatccatggtttgtagagcatgactccctggaccccttaggtaggaa-ttgggcaaggtaa i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27272513 317 - 28799539 cttatgggaccc----aaaagggtgcctgattctttgttgattatctcctgactctgcaaagaaaggaacgaaaacaaagaga-taaagggattccctatagaatgtgactttttctcacaaaa---ttttcagggcaatttcaaggcatggcaaagaagtatatttt-gattaaatattttcttccttgtctcaaaatgttatgccagagtcagactgaaaagcaagttacaatgtacagggtcaaataaaaccaatctgatgagaatccatggtttgtagagcatgactccctggaccccttaggtaggaa-ttgggcaagataa i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 93900 320 - 3620821 cttatgggaccc----aaaagggtgcctggctctttgttgattatctcctgactctgcaaagaaaggaaagaaaacaaagaga-taaggggattccctatagaatgtgactttttcccacaagagactttgcagggcaatttcaaggcatggcaaagaagtatatttt-gattaaatattttctgccttgtctcataatgttatgccagagttagattgaaaagcaagtcacaatgtacagggtgaaataaagccaatctgatgagaatccatggtttgtagagcatgactccctggaccccttaggtagaaa-ttgggcaagataa i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103947056 467 + 126811233 I e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e otoGar3.GL873538 19669398 548 - 27850971 I a score=863042.000000 s hg38.chrUn_KI270746v1 33799 129 + 66486 aaaatt--agagcttagtcctcaCTGATAAGATAAATTCTAAGATAAGTATATTTA----CAGATTTGCCATGCAGCAAG-AAAAAAAGAAAAGAAGAAATGTTGAAGAGTTGCACCAAAAAGTTAGGGAAAAGTT s panPan2.chr2A 89842831 129 + 114371477 aaaatt--agagcttagtcctcaCTGATAAGATAAATTCTAAGATAAGTATATTTA----CAGATTTGCCATACAGCAAG-AAAAAAAGAAAAGAAGAAATGTTGAAGAGTTGTACCAAAAAGTTAGGGAAAAGTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 858971 130 - 998796 aaaatt--agagcttagtcctcaCTGATAAGATAAATTCTAAGATAAGTATATTTA----CAGATTTGCCATACAGCAAGAAAAAAAAGAAAACAAGAAATGTTGAAGAGTTGTACCAAAAAGTTAGGGAAAAGTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47855170 129 + 94967081 aaaatt--agagcttagtcctcaCTGATAAGATAAATTCTAAGATAAGTATATTTA----CAGATTTGCCATACAGCAAG-AAAAAAAGAAAAGAAGAAATGTTGAAGAGTTGCACCAAAAAGTTAGGGAAAAGTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557115 129 + 108979918 aaaatt--aaagcttactcctcaCTGATAAAATAAATACTAAGATAAGTATATTTA----CAGATTTACCATACAGCAAG-AAAAAGAGAAAAGAAGAAATGTTGAAGAGTTGCACCAAAAAGTTCGGGAAAAGTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17693893 129 + 111193037 aaaatt--aaagcttactcctcaCTGATAAAATAAATACTAAGATAAGTATATTTA----CAGATTTACCATACAGCAAG-AAAAAGAGAAAAGAAGAAATGTTGAAGAGTTGCACCAAAAAGTTCGGGAAAAGTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559545 129 - 11597128 aaaatt--aaagcttactcctcaCTGATAAAATAAATACTAAGATAAGTATATTTA----CAGATTTACCATACAGCAAG-AAAAAGAGAAAAGAAGAAATGTTGAAGAGTTGCACCAAAAAGTTCGGGAAAAGTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5048903 129 - 5626091 aaaatt--aaagcttactcctcaCTGATAAAATAAATACTAAGATAAGTATATTTA----CAGATTTGCCATACAGCAAG-AAAAAGAGAAAAGAAGAAATGCTGAAGAGTTGCACCAAAAAGTTCGGGAAAAGTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528158 129 + 107702431 aaaatt--aaagcttactcctcaCTGATAAAATAAATACTAAGATAAGTATATTTA----CAGATTTGCCATACTGCAAG-AAAAAGAGAAACGAAGAAATGTTGAAGAGTTGCACCAAAAAGTTCGGGAAAAGTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335543 129 - 409142 aaaatt--aaagcttactcctcaCTGATAAAATAAATACTAAGATAAGTATATTTA----CAGATTTACCATACAGCAAG-AAAAAGAGAAAAGAAGAAATGTTGAAGAGTTGCACCAAAAAGTTCGGGAAAAGTT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14834122 131 + 108792865 aaaatcagagagcttaatcctcaCTGATAAAATAAATTCTAAGAAAAGTATATTTA----CAGATATGCCATACTACAAG-AAAAAGAGAAAGGAAGAAATTCTGAAAAGTTGCACGAAAAAGTTGGGGAAAAGAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27272830 131 - 28799539 aaaatcagagagcttaatcttcaCTGATAAAATAAATTCTAAGATAAGTGTATTTA----CAGATATGCCATACCACAAG-AAAAAGAGAAAGGAAGAAATTCTGAAAAGTTGCACGAAGAAGTTAGGGAAAAGAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 94220 131 - 3620821 aaaatcagagagcttaatcttcaCTGATAAAATAAATTCTAAGATAAGTATATTTA----CAGATATGCCATACTACAAG-AAAAAGAGAAAGGAAGAAATTCTGAAAAGTTGCATGAAAAAGTTAGGGAAAAGAT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19669946 130 - 27850971 AAAATG--AATGCTTTGTTGT--CTAACAAAACAAATTTTTAAA-AAGTACATTTAACTGCAGATTTACCTTAAAACAAG-AAGAAGAGAAGCGAAAAAATGCTGATATGTTGTATGAAAAAAATAGAGAACAGTT i otoGar3.GL873538 I 548 C 0 e nasLar1.chr13 103947056 467 + 126811233 I e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=227307.000000 s hg38.chrUn_KI270746v1 33928 33 + 66486 AAGA---ATAACAAAAGAGCAATGGAAGATAGAAGC s panPan2.chr2A 89842960 33 + 114371477 AAGA---ATAACAGAAGAGCAGTATAGGATAGAAGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 859101 33 - 998796 AAGA---ATAACAGAAGAGCAATATAGTATAGAAGC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47855299 33 + 94967081 AAGA---ATAACAGAAGAGCAATATAGGATAGAAGC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557244 33 + 108979918 AAGA---ACAACAGAAGAGCAACATAGGATAGAAGT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694022 33 + 111193037 AAGA---ACAACAGAAGAGCAACATAGGATAGAAGT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559674 33 - 11597128 AAGA---ACAACAGAAGAGCAACATAGGATAGAAGT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049032 33 - 5626091 AAGA---ACAACAGAAGAGCAACATAGGATAGAAGT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528287 33 + 107702431 AAGA---ACAACAGAAGAGCAATATAGGATAGAAGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335672 33 - 409142 AAGA---ACAACAGGAGAGCAACATAGGATAGAAGT i manLeu1.NW_012101154v1 C 0 C 0 s nasLar1.chr13 103947523 33 + 126811233 aaga---acaataaaagagcaaTATAAGATAGAAGC i nasLar1.chr13 I 467 I 10861 s calJac3.chr14 14834253 33 + 108792865 ---ACAGAAAATAGAAGAGCAATATGCAATAGACGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27272961 30 - 28799539 ---A---ATAATAGAAGAGCAATATGCGATAGACGC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 94351 30 - 3620821 ---A---ATAATGGAAGAGCAACATGCGATAGACGC i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19670076 33 - 27850971 AAGA---AGAAAAGAAGAGCAATACAGGAAAGAAGT i otoGar3.GL873538 C 0 C 0 e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=929487.000000 s hg38.chrUn_KI270746v1 33961 163 + 66486 TGATACGACAAAACAAATTAAACCGGCTCTTGAATCAGTGGAGGTGGAATTGAAGACAGGAGGAAATAATTCAAATCAGGTAAATTAATGCTTGGT-AAAACTTCATATTTCTACTC-------ATTAATATTACTTACA-ATATCTCTTTCATTTAATGTATAT--TATTTAG- s panPan2.chr2A 89842993 165 + 114371477 TGATGTGACAAAACAAATTAAACTGGCTCTCAAATCAGTGGAGGTGGAATTGAAGACAGGAGGAAATAATTCAAATCAGGTAAACTAATGTTTGGT-AAAACTTCATATTTCTACTC-----TTATTAATATTACTTATA-ATATCTCTTTCATTTAATGTATAT--TATTTAG- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 859134 165 - 998796 TGATGTGACAAAACAAATTAAACTGGCTCTCAAATCAGCAGAGGTGGAATTGAAGACAGGAGGAAATAATTCAAATCAGGTAAACTAATGTTTGGT-AAAACTTCATATTTCTACTC-----ttattaatattacttata-atatctatttcatttaatgtatat--tatttaG- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47855332 165 + 94967081 TGATGTGACAAAACAAATGAAACTGGCTATCAAATCAGCGGAGGTGGAATTGAAGACAGGAGGAAATAATTCAAATCAGGTAAATTAATGTTTGGT-AAAACTTCATATTTCTACTC-----TTATTAATATTACTTATG-ATATCTCTTTCATTTAATGTATAT--TATTTAG- i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557277 156 + 108979918 TGATGTGACAGAACAAGTTAAACTGGCTCTCAAATCACTGGAGATGGAATTGAAGAGTGTAGGAAAGAATTCAAATCAG----------GTTTGGT-AAAATTTCATATTTCTACTT----TTTTTTAATGTTACTTATA-ATATCTCTTTCATTTAATGTATAT--TATTTAA- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694055 156 + 111193037 TGATGTGACAGAACAAGTTAAACTGGCTCTCAAATCACTGGAGATGGAATTGAAGAGTGTAGGAAAGAATTCAAATCAG----------GTTTGGT-AAAACTTTATATTTCTACTT----TTTTTTAATGTTACTTATA-ATATCTCTTTCATTTAATGTATAT--TATTTAA- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559707 156 - 11597128 TGATGTGACAGAACAAGTTAAACTGGCTCTCAAATCACTGGAGATGGAATTGAAGAGTGTAGGAAAGAATTCAAATCAG----------GTTTGGT-AAAACTTCATATTTCTACTT----TTTTTAAATGTTACTTATA-ATATCTCTTTCATTTAATGTATAT--TATTTAA- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049065 156 - 5626091 TGATGTGACAGAACAAGTTAAACTGGCTCTCAAATCACTGGAGATGGAATTGAAGAGTGTAGGAAAGAATTCAAATCAG----------GTTTGGT-AAAACTTCATCTTTCTACTT----TTTTTTAATGTTACTTATA-ATATCTCTTTCATTTAATGTATAT--TATTTAA- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528320 163 + 107702431 TGATGTGACAG---AAGTTAAACTGGCTCTCAAATCACTGGAGATGGAATTGAAGAGTGTAGGAAAGAATTCAAATCAGGTAAATAAATGTTTGGT-AAAACTTCATATTTCTACTT----TTTTTTAATGTTACTTATA-ATATCTCTTTCATTTAATGTATAT--TATTTAA- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335705 156 - 409142 TGATGAGACAGAACAAGTTAAACTGGCTCTCAAATCACTGGAGATGGAATTGAAGAGTGTAGGAAAGAATTCAAATCAG----------GTTTGGT-AAAACTTCATATTTCTACTT----TTTTCAAATGTTACTTATA-ATATCTCTTTCATTTAATGTATAT--TATTTAA- i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14834286 156 + 108792865 CAAAGAGATAAAACAACTTAAACTGGCTATCAAATCTCTGGAGGTGGAATTGGAGACTGTGGGGAATGATTCAAATCAGGTAAATTAATGTCTGGT-GAAACTTCATGTTTCTACtt-----ttattaatat---------atattaat---atttagtatatattatatataG- i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27272991 165 - 28799539 CAAAGAGATAAAACAACTTAAACTGGCCATCACATCACTGGAGGTGGAATTGGAGACTGTGGAAAATGATTCAAATCAGGTAAATTAATGTTTGGT-GAAACTTCATGTTTCTACtt-----ttattaatattagttata-atatctctttaatttagtatatat--tatttaG- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 94381 165 - 3620821 CAAAGAGATAAAACAACTTAAACTGGCCATCAAATCACTGGAGGTGGAATTGGAGACTGTGGAAAATGATTCAAATCAGGTAAATTAATGTTTGGT-GAAACTTCATGTTTCTACTT-----TTATTAATATTAGTTATA-ATATCTCTTTAATTTAGTATATAT--TATTTAG- i cebCap1.NW_016107537v1 C 0 I 29 s otoGar3.GL873538 19670109 173 - 27850971 TGAAGCGAAACAACAACTTGAACTCACTCTCAGAACACTAGATATGGAATTGAGGACTGTAAAAAATAATTTGGACCAGGTAAATCAGGCTTTGGTAAAAATTTTATATTTCTAACTTTATTTCATAAAGATTATTTATACTTATCCCTTTGATTTAGTATGTAT--TATTTCAG i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I a score=97245.000000 s hg38.chrUn_KI270746v1 34124 26 + 66486 ACCT----AAAC-AGTCCCCAAATTTTATTT s panPan2.chr2A 89843158 26 + 114371477 GCCT----AAAC-AATCCCCAAATTTTATTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 859299 26 - 998796 GCCT----AAAC-AATCCCCAAATTTTATTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47855497 26 + 94967081 GCCT----AAAC-AATCCCCAAATTTTATTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557433 28 + 108979918 GCCTA--AAAAA-AAACCCCAAATTGTATTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694211 28 + 111193037 GCCTA--AAAAA-AAACCCCAAATTGTATTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559863 27 - 11597128 GCCT---AAAAA-AAACCCCAAATTGTATTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049221 26 - 5626091 GCCT----AAAA-AAACCCCAAATTGTATTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528483 26 + 107702431 GCCT----AAGA-AAACCCCAAATTGTATTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335861 26 - 409142 GCCT----AAAA-AAACCCCAAATTGTATTT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14834442 27 + 108792865 GCCT----AAAACAAACCAAAAATTTTATTT i calJac3.chr14 C 0 M 148 s saiBol1.JH378124 27273156 23 - 28799539 CCCT----A----AAACCAAAAATTTTATTT i saiBol1.JH378124 C 0 C 0 s otoGar3.GL873538 19670282 26 - 27850971 ----TTTAAAAC-AAACCTAAAATGTTATCT i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I a score=34595.000000 s hg38.chrUn_KI270746v1 34150 6 + 66486 CATCTT s panPan2.chr2A 89843184 6 + 114371477 CATCTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 859325 6 - 998796 CATCTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47855523 6 + 94967081 CATCTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557461 6 + 108979918 CATCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694239 6 + 111193037 CATCTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559890 6 - 11597128 CATCTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049247 6 - 5626091 CATCTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528509 6 + 107702431 CATCTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335887 6 - 409142 CATCTT i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27273179 6 - 28799539 TATCTT i saiBol1.JH378124 C 0 C 0 s otoGar3.GL873538 19670308 6 - 27850971 TATCTT i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I e calJac3.chr14 14834469 148 + 108792865 M a score=27590.000000 s hg38.chrUn_KI270746v1 34156 6 + 66486 AAAAAT s panPan2.chr2A 89843190 6 + 114371477 AAAAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 859331 6 - 998796 AAAAGT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47855529 6 + 94967081 AAAAAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557467 6 + 108979918 AAAAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694245 6 + 111193037 AAAAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559896 6 - 11597128 AAAAAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049253 6 - 5626091 AAAAAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528515 6 + 107702431 AAAAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335893 6 - 409142 AAAAAT i manLeu1.NW_012101154v1 C 0 C 0 s otoGar3.GL873538 19670314 6 - 27850971 GAAAAT i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I e saiBol1.JH378124 27273185 0 - 28799539 C e calJac3.chr14 14834469 148 + 108792865 M a score=-99.000000 s hg38.chrUn_KI270746v1 34162 5 + 66486 -GAATC s panPan2.chr2A 89843196 5 + 114371477 -GAATC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 859337 5 - 998796 -GAATC i gorGor5.CYUI01015730v1 C 0 C 0 s otoGar3.GL873538 19670320 5 - 27850971 TTACT- i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11212138 1359 + 13868332 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I e manLeu1.NW_012101154v1 335899 0 - 409142 C e chlSab2.chr14 16528521 0 + 107702431 C e cerAty1.NW_012001187v1 5049259 0 - 5626091 C e macNem1.NW_012014799v1 10559902 0 - 11597128 C e rheMac8.chr13 108557473 0 + 108979918 C e saiBol1.JH378124 27273185 0 - 28799539 C e calJac3.chr14 14834469 148 + 108792865 M e macFas5.chr13 17694251 0 + 111193037 C e nomLeu3.chr14 47855535 0 + 94967081 C a score=2820.000000 s hg38.chrUn_KI270746v1 34167 3 + 66486 ATG s panPan2.chr2A 89843201 3 + 114371477 ATG i panPan2.chr2A C 0 I 1 s gorGor5.CYUI01015730v1 859342 3 - 998796 ATG i gorGor5.CYUI01015730v1 C 0 I 1 s ponAbe2.chr2a_random 11213497 3 + 13868332 ATG i ponAbe2.chr2a_random I 1359 C 0 s otoGar3.GL873538 19670325 3 - 27850971 ATG i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I e manLeu1.NW_012101154v1 335899 0 - 409142 C e chlSab2.chr14 16528521 0 + 107702431 C e cerAty1.NW_012001187v1 5049259 0 - 5626091 C e macNem1.NW_012014799v1 10559902 0 - 11597128 C e rheMac8.chr13 108557473 0 + 108979918 C e saiBol1.JH378124 27273185 0 - 28799539 C e calJac3.chr14 14834469 148 + 108792865 M e macFas5.chr13 17694251 0 + 111193037 C e nomLeu3.chr14 47855535 0 + 94967081 C a score=311.000000 s hg38.chrUn_KI270746v1 34170 2 + 66486 GT s ponAbe2.chr2a_random 11213500 2 + 13868332 GT i ponAbe2.chr2a_random C 0 C 0 s otoGar3.GL873538 19670328 2 - 27850971 AT i otoGar3.GL873538 C 0 I 743 e nasLar1.chr13 103947556 10861 + 126811233 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I e manLeu1.NW_012101154v1 335899 0 - 409142 C e chlSab2.chr14 16528521 0 + 107702431 C e cerAty1.NW_012001187v1 5049259 0 - 5626091 C e macNem1.NW_012014799v1 10559902 0 - 11597128 C e rheMac8.chr13 108557473 0 + 108979918 C e panPan2.chr2A 89843204 1 + 114371477 I e saiBol1.JH378124 27273185 0 - 28799539 C e calJac3.chr14 14834469 148 + 108792865 M e macFas5.chr13 17694251 0 + 111193037 C e nomLeu3.chr14 47855535 0 + 94967081 C e gorGor5.CYUI01015730v1 859345 1 - 998796 I a score=100.000000 s hg38.chrUn_KI270746v1 34172 1 + 66486 G s ponAbe2.chr2a_random 11213502 1 + 13868332 G i ponAbe2.chr2a_random C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e papAnu3.chr13 104266998 13140 + 128036923 I e tarSyr2.KE950423v1 1003952 1795 + 1054607 I e otoGar3.GL873538 19670330 743 - 27850971 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I e manLeu1.NW_012101154v1 335899 0 - 409142 C e chlSab2.chr14 16528521 0 + 107702431 C e cerAty1.NW_012001187v1 5049259 0 - 5626091 C e macNem1.NW_012014799v1 10559902 0 - 11597128 C e rheMac8.chr13 108557473 0 + 108979918 C e panPan2.chr2A 89843204 1 + 114371477 I e saiBol1.JH378124 27273185 0 - 28799539 C e calJac3.chr14 14834469 148 + 108792865 M e macFas5.chr13 17694251 0 + 111193037 C e nomLeu3.chr14 47855535 0 + 94967081 C e gorGor5.CYUI01015730v1 859345 1 - 998796 I a score=19155.000000 s hg38.chrUn_KI270746v1 34173 134 + 66486 ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggcgga--tcacaaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctactaaaaatgcaaaaaaaa------------ s ponAbe2.chr2a_random 11213503 134 + 13868332 ggctgggcatggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcgga--tcacaaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctgtactaaaaatgcaaaaaaaa------------ i ponAbe2.chr2a_random C 0 C 0 s tarSyr2.KE950423v1 1005747 148 + 1054607 ggccagatgctgtggctctcccttgcaatcccaagattttgggagataagggctcaaggatttcttgagcccaagaaagtgatttcatcctgggcaacatagcaagatcatgtctttagcaaaaaaaaaaaaagaaaagaaaaaaaaa i tarSyr2.KE950423v1 I 1795 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e papAnu3.chr13 104266998 13140 + 128036923 I e otoGar3.GL873538 19670330 743 - 27850971 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I e manLeu1.NW_012101154v1 335899 0 - 409142 C e chlSab2.chr14 16528521 0 + 107702431 C e cerAty1.NW_012001187v1 5049259 0 - 5626091 C e macNem1.NW_012014799v1 10559902 0 - 11597128 C e rheMac8.chr13 108557473 0 + 108979918 C e panPan2.chr2A 89843204 1 + 114371477 I e saiBol1.JH378124 27273185 0 - 28799539 C e calJac3.chr14 14834469 148 + 108792865 M e macFas5.chr13 17694251 0 + 111193037 C e nomLeu3.chr14 47855535 0 + 94967081 C e gorGor5.CYUI01015730v1 859345 1 - 998796 I a score=67.000000 s hg38.chrUn_KI270746v1 34307 1 + 66486 g s ponAbe2.chr2a_random 11213637 1 + 13868332 g i ponAbe2.chr2a_random C 0 C 0 s papAnu3.chr16 15431662 1 + 74645514 a i papAnu3.chr16 n 13140 n 13140 s tarSyr2.KE950423v1 1005895 1 + 1054607 a i tarSyr2.KE950423v1 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e otoGar3.GL873538 19670330 743 - 27850971 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I e manLeu1.NW_012101154v1 335899 0 - 409142 C e chlSab2.chr14 16528521 0 + 107702431 C e cerAty1.NW_012001187v1 5049259 0 - 5626091 C e macNem1.NW_012014799v1 10559902 0 - 11597128 C e rheMac8.chr13 108557473 0 + 108979918 C e panPan2.chr2A 89843204 1 + 114371477 I e saiBol1.JH378124 27273185 0 - 28799539 C e calJac3.chr14 14834469 148 + 108792865 M e macFas5.chr13 17694251 0 + 111193037 C e nomLeu3.chr14 47855535 0 + 94967081 C e gorGor5.CYUI01015730v1 859345 1 - 998796 I a score=24075.000000 s hg38.chrUn_KI270746v1 34308 155 + 66486 tagccaggcgtggtggcgggcacctgtagtctcagctactagggaggctgaggcaggagaatggcgtgaacccaggaggtggagcttgcagtgagccgagatcccgccactgcactccagcctgggcgacagagtgagactctgtctcaaaaaaa s ponAbe2.chr2a_random 11213638 155 + 13868332 tagccgggcatggtggcgggcgcctgtagtctcagctactcaggaggctgaggcaggagaatggcgtgaacccaggaggtggagcttgcagtgagccgagatcccgccactgcactccagcctgggcaacagagtgagactctgtctcaaaaaaa i ponAbe2.chr2a_random C 0 C 0 s tarSyr2.KE950423v1 1005896 148 + 1054607 tggccaagtatggtaattagcca----agttgtatctacttcagagactgaggtgagaggatcacttatgtccaggatttcaa---tacagtgagctatgctggcaccactgcactccaacgtgagtggcagagtaaaactctaactcaaaaaaa i tarSyr2.KE950423v1 C 0 I 75 e nasLar1.chr13 103947556 10861 + 126811233 I e papAnu3.chr16 15431663 13140 + 74645514 I e otoGar3.GL873538 19670330 743 - 27850971 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I e manLeu1.NW_012101154v1 335899 0 - 409142 C e chlSab2.chr14 16528521 0 + 107702431 C e cerAty1.NW_012001187v1 5049259 0 - 5626091 C e macNem1.NW_012014799v1 10559902 0 - 11597128 C e rheMac8.chr13 108557473 0 + 108979918 C e panPan2.chr2A 89843204 1 + 114371477 I e saiBol1.JH378124 27273185 0 - 28799539 C e calJac3.chr14 14834469 148 + 108792865 M e macFas5.chr13 17694251 0 + 111193037 C e nomLeu3.chr14 47855535 0 + 94967081 C e gorGor5.CYUI01015730v1 859345 1 - 998796 I a score=602.000000 s hg38.chrUn_KI270746v1 34463 12 + 66486 -aaataaa--aataa s ponAbe2.chr2a_random 11213793 15 + 13868332 taaataaataaataa i ponAbe2.chr2a_random C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006044 75 + 1054607 I e otoGar3.GL873538 19670330 743 - 27850971 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I e manLeu1.NW_012101154v1 335899 0 - 409142 C e chlSab2.chr14 16528521 0 + 107702431 C e cerAty1.NW_012001187v1 5049259 0 - 5626091 C e macNem1.NW_012014799v1 10559902 0 - 11597128 C e rheMac8.chr13 108557473 0 + 108979918 C e panPan2.chr2A 89843204 1 + 114371477 I e saiBol1.JH378124 27273185 0 - 28799539 C e calJac3.chr14 14834469 148 + 108792865 M e macFas5.chr13 17694251 0 + 111193037 C e nomLeu3.chr14 47855535 0 + 94967081 C e gorGor5.CYUI01015730v1 859345 1 - 998796 I a score=-590.000000 s hg38.chrUn_KI270746v1 34475 6 + 66486 aa---aata-- s ponAbe2.chr2a_random 11213808 9 + 13868332 aataaaata-- i ponAbe2.chr2a_random C 0 C 0 s tarSyr2.KE950423v1 1006119 6 + 1054607 -----AACACA i tarSyr2.KE950423v1 I 75 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e papAnu3.chr16 15431663 13140 + 74645514 I e otoGar3.GL873538 19670330 743 - 27850971 I e cebCap1.NW_016107537v1 94546 29 - 3620821 I e manLeu1.NW_012101154v1 335899 0 - 409142 C e chlSab2.chr14 16528521 0 + 107702431 C e cerAty1.NW_012001187v1 5049259 0 - 5626091 C e macNem1.NW_012014799v1 10559902 0 - 11597128 C e rheMac8.chr13 108557473 0 + 108979918 C e panPan2.chr2A 89843204 1 + 114371477 I e saiBol1.JH378124 27273185 0 - 28799539 C e calJac3.chr14 14834469 148 + 108792865 M e macFas5.chr13 17694251 0 + 111193037 C e nomLeu3.chr14 47855535 0 + 94967081 C e gorGor5.CYUI01015730v1 859345 1 - 998796 I a score=-655.000000 s hg38.chrUn_KI270746v1 34481 7 + 66486 aaa-----aaAA- s ponAbe2.chr2a_random 11213817 10 + 13868332 aaataa--aaaa- i ponAbe2.chr2a_random C 0 C 0 s saiBol1.JH378124 27273185 6 - 28799539 ----AA--AAAA- i saiBol1.JH378124 C 0 I 1 s cebCap1.NW_016107537v1 94575 6 - 3620821 ----AA--AAAA- i cebCap1.NW_016107537v1 I 29 I 1 s tarSyr2.KE950423v1 1006125 9 + 1054607 ----AACCAAAAT i tarSyr2.KE950423v1 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e papAnu3.chr16 15431663 13140 + 74645514 I e otoGar3.GL873538 19670330 743 - 27850971 I e manLeu1.NW_012101154v1 335899 0 - 409142 C e chlSab2.chr14 16528521 0 + 107702431 C e cerAty1.NW_012001187v1 5049259 0 - 5626091 C e macNem1.NW_012014799v1 10559902 0 - 11597128 C e rheMac8.chr13 108557473 0 + 108979918 C e panPan2.chr2A 89843204 1 + 114371477 I e calJac3.chr14 14834469 148 + 108792865 M e macFas5.chr13 17694251 0 + 111193037 C e nomLeu3.chr14 47855535 0 + 94967081 C e gorGor5.CYUI01015730v1 859345 1 - 998796 I a score=27522.000000 s hg38.chrUn_KI270746v1 34488 5 + 66486 GAATC s ponAbe2.chr2a_random 11213827 5 + 13868332 gaata i ponAbe2.chr2a_random C 0 I 144 s nomLeu3.chr14 47855535 5 + 94967081 GAATC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557473 5 + 108979918 GAATC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694251 5 + 111193037 GAATC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559902 5 - 11597128 GAATC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049259 5 - 5626091 GAATC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528521 5 + 107702431 GAATC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335899 5 - 409142 GAATC i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27273192 5 - 28799539 GAATC i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 94582 5 - 3620821 GAATC i cebCap1.NW_016107537v1 I 1 C 0 s tarSyr2.KE950423v1 1006134 5 + 1054607 GAACC i tarSyr2.KE950423v1 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e papAnu3.chr16 15431663 13140 + 74645514 I e otoGar3.GL873538 19670330 743 - 27850971 I e panPan2.chr2A 89843204 1 + 114371477 I e calJac3.chr14 14834469 148 + 108792865 M e gorGor5.CYUI01015730v1 859345 1 - 998796 I a score=18090.000000 s hg38.chrUn_KI270746v1 34493 7 + 66486 ATGGCAT s nomLeu3.chr14 47855540 7 + 94967081 ATGGCAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557478 7 + 108979918 AAGGAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694256 7 + 111193037 AAGGAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559907 7 - 11597128 AAGGAAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049264 7 - 5626091 AAGGAAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528526 7 + 107702431 AAGGCAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335904 7 - 409142 AAGGAAT i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27273197 7 - 28799539 ATGGCAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 94587 7 - 3620821 ATGGCAT i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 1006139 7 + 1054607 CTGACTT i tarSyr2.KE950423v1 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213832 144 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e otoGar3.GL873538 19670330 743 - 27850971 I e panPan2.chr2A 89843204 1 + 114371477 I e calJac3.chr14 14834469 148 + 108792865 M e gorGor5.CYUI01015730v1 859345 1 - 998796 I a score=192709.000000 s hg38.chrUn_KI270746v1 34500 40 + 66486 TTATAGCTACAATTATTTATAATAAATCTTG-AAAT----ATTTT s panPan2.chr2A 89843205 40 + 114371477 TTATAGCTACAATTATTTATAATAAATATTG-AAAT----ATTTT i panPan2.chr2A I 1 C 0 s gorGor5.CYUI01015730v1 859346 40 - 998796 TTATAGCTACAATTATTTATAATAAATATTG-AAAT----ATTTT i gorGor5.CYUI01015730v1 I 1 C 0 s nomLeu3.chr14 47855547 36 + 94967081 TTATAGCTACAATTATTTGT----AATCTTG-AAAT----ACTTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557485 36 + 108979918 TTATAGCTACAATTATTTAT----AATCTTG-AAAT----ATTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694263 36 + 111193037 TTATAGCTACAATTATTTAT----AATCTTG-AAAT----ATTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559914 36 - 11597128 TTATAGCTACAATTATTTAT----AATCTTG-AAAT----ATTTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049271 36 - 5626091 TTATAGCTACAATTATTTAT----AATCTTG-AAAT----ATTTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528533 36 + 107702431 TTATAGCTACAATTATTTAT----AATCTTG-AAAT----ATTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335911 36 - 409142 TTATAGCTACAATTATTTAT----AATCTTG-AAAT----ATTTT i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27273204 42 - 28799539 TTATAGCTACAATTATTTATAATAGATCTTG-ACATCA--ATTTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 94594 44 - 3620821 TTATAGCTACAATTATTTATAATAAATCTTG-ACATCAATATTTT i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 1006146 37 + 1054607 TTATAGCTAAAGTTATTTATTATAAATCTAGTATAT----A---- i tarSyr2.KE950423v1 C 0 I 3826 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213832 144 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e otoGar3.GL873538 19670330 743 - 27850971 I e calJac3.chr14 14834469 148 + 108792865 M a score=21042.000000 s hg38.chrUn_KI270746v1 34540 5 + 66486 ATTTT s panPan2.chr2A 89843245 5 + 114371477 ATTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 859386 5 - 998796 ATTTA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47855583 5 + 94967081 ATTTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557521 5 + 108979918 ATTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694299 5 + 111193037 ATATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559950 5 - 11597128 ATTTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049307 5 - 5626091 ATTTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528569 5 + 107702431 ATTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335947 5 - 409142 ATTTT i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27273246 5 - 28799539 TTTTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 94638 5 - 3620821 ATTTT i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213832 144 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e otoGar3.GL873538 19670330 743 - 27850971 I e calJac3.chr14 14834469 148 + 108792865 M a score=551929.000000 s hg38.chrUn_KI270746v1 34545 94 + 66486 AGTTCAAAGGCCTTATGTAAACAATGCTATTCTTTAATATATACTTAATGATA--TTGTAAGTATTTTGTTCCTAGTGACATAGTTCAGCATATTT----- s panPan2.chr2A 89843250 94 + 114371477 AGTTCAAAGGCCTTTTGAAAACAATGCTATTCTATAATATATACTTAATGATA--TTGTAAGTATTTTGTTCCTAGTGACATAGTTCAGCATATTT----- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 859391 94 - 998796 AGTTCAAAGGCCTTTTGAAAACAATGCTATTCTATAATATATACTTAATGATA--TTGTAAGTATTTTGTTCCTAGTGACATAGTTCAGCATATTT----- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47855588 94 + 94967081 AGTTCAAAGGCCTTTTGAAAACAATGCTATTCTATAATATATACTTAATGATA--TTGTAACTATTTTGTTCCTAGTGACATAGTTCAGCATATTT----- i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557526 94 + 108979918 AGTTCAAAGACCTTTTGAAAACAATGCTATTCTATAATGTATACTTAATGATA--TTGTGAGTATTTTGTTCCTAGTGACATAGTTCAGCATATTT----- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694304 94 + 111193037 AGTTCAAAGACCTTTTGAAAACAATGCTATTCTATAATGTATACTTAATGATA--TTTTGAGTATTTTGTTCCTAGTGACATAGTTCAGCATATTT----- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10559955 94 - 11597128 AGTTCAAAGACCTTTTGAAAACAATGCTATTCTATAATGTATACTTAATGGTA--TTGTGAGTATTTTGTTCCTAGTGACATAGTTCAGCATATTT----- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049312 94 - 5626091 AGTTCAAAGACCATTTGAAAACAATGCTATTCTATAATGTATACTTAATGATA--TTGTAAGTATTTTGTTCCTAGTGACATAATTCAGCATATTT----- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528574 90 + 107702431 AGTTCAAAGACCTTTTGAAAACAATGCTATTCTATAATGTATACTTAATGATA--TT----GTATTTTGTTCCTAGTGACATAGTTCAGCAGATTT----- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 335952 94 - 409142 AGTTCAAAGACCTTTTGAAAACAATGCTATTCTATAATGTATACTTAATGATA--TTGTAAGTATTTTGTTCCTAGTGACATAGTTCAGCATATTT----- i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27273251 94 - 28799539 AGTTCAAAGACCTTTTGGAAACAATGATATTCAATAATATATGCTTAATGGTA--TTGTAAGAATGTTGTTCCTAGTGACATTGTTGAGCATATTT----- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 94643 94 - 3620821 AGTTCAAAGACCTTTTGAAAACAATGATATTCAATAATATATACTTAATGGTA--TTGTAAGAATGTTGTTACTAGTGATATAGTTCAGCACGTTT----- i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19671073 101 - 27850971 AGTACCAAGAGCTTGTGAAAATAATGATATGCCATAATATATACATAGTGATAATTTGTTGATATTCTGTTCCTAGGGAAATAGTTCAGTGTATGAATATA i otoGar3.GL873538 I 743 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213832 144 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e calJac3.chr14 14834469 148 + 108792865 M a score=1118.000000 s hg38.chrUn_KI270746v1 34639 1 + 66486 -T s panPan2.chr2A 89843344 1 + 114371477 -T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 859485 1 - 998796 -T i gorGor5.CYUI01015730v1 C 0 C 0 s ponAbe2.chr2a_random 11213976 1 + 13868332 -T i ponAbe2.chr2a_random I 144 I 3649 s nomLeu3.chr14 47855682 1 + 94967081 -T i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557620 1 + 108979918 -T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694398 1 + 111193037 -T i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10560049 1 - 11597128 -T i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049406 1 - 5626091 -T i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528664 1 + 107702431 -T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 336046 1 - 409142 -T i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27273345 1 - 28799539 -T i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 94737 1 - 3620821 -T i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19671174 1 - 27850971 A- i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e calJac3.chr14 14834469 148 + 108792865 M a score=416654.000000 s hg38.chrUn_KI270746v1 34640 71 + 66486 CCCCTATTTCATGTTAATTAC-GTTTCAAATGTTATGGAAAAGAAATAAAAGTTATCACA-ATAGT-AAATAAT s panPan2.chr2A 89843345 71 + 114371477 CCCCTATTTCATGTTAATTAC-ATTTCAAATGTTATGGAAAAGAAATAAAAGTTATCACA-ATAGC-AAATAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 859486 71 - 998796 CCCCTATTTCATGTTAATTAC-ATTTCAAATGTTATGGAAAAGAAATAAAAGTTATCACA-ATAGC-AAATAAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47855683 70 + 94967081 -CCTTATTTCCTGTTAATTAC-ATTTCAAATGTTATGGAAAAGAAATAAATGTTATCACA-ATAGC-AAATAAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557621 72 + 108979918 CCCCTATTTCATGTTAATTACTGTTTCAAATGTTATGGAAAAGAAATAAAAGTGATCACA-ATAGC-AAATAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694399 72 + 111193037 CCCCTATTTCATGTTAATTACTGTTTCAAATGTTATGGAAAAGAAATAAAAGTGATCACA-ATAGC-AAATAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10560050 72 - 11597128 CCCCTATTTCATGTTAATTACTGTTTCAAATGTTATGGAAAAGAAATAAAAGTGATCACA-ATAGC-AAATAAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5049407 72 - 5626091 CCCCTATTTCATGTTAATTACTGTTTCAAATGTTATGGAAAAGAAATAAAAGTGATCACA-ATAGC-AAATAAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528665 72 + 107702431 CCCCTATTTCATGTTAATTACTGTTTCAAGTGTTATGGAAAAGAAATAAAAGTGATCACA-ATAAC-AAATAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 336047 72 - 409142 CCCCTATTTCATGTTAATTACTGTTTCAAATGTTATGGAAAAGAAATAAAAGTGATCACA-ATAGC-AAATAAT i manLeu1.NW_012101154v1 C 0 C 0 s saiBol1.JH378124 27273346 71 - 28799539 TCCCTATTTCATGTTAATTACTGTTTC-AATATTATGGAAAGGAAATAAAAGTTATCATA-ATAGC-AAGTAAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 94738 72 - 3620821 TCCCTATTTCATGTTAACTACTGTTTCAAATGTTATGGAAAGGAAATAAAAGTTATCATA-ATAGC-AAATAAT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19671175 73 - 27850971 ACCCCGGTTCACACTTATTACTGTTTCAAGTATTAC-GAAAAGGAACAAAAGTTACTATACATAACAAAATAAT i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e calJac3.chr14 14834469 148 + 108792865 M a score=13364068.000000 s hg38.chrUn_KI270746v1 34711 1983 + 66486 CTCATGATTTTCTAAAAAGAGCTTTATAAATTTAATTTTCTTGACTTTTGGTGTCTTGAAATAGAAGATTATTTTTG------------------------------------------TATGTATGTATCTACCTCACAGAAGTTAT--TGATTTGGTGGAAGAGCACTAGGATTAGAGTCAGAAAAGCTGGGAA-AAA-TCCTGCAGCTTCCTTATATTTTTAACCTTTTGCTAT-AGAATTATA--ACTAAATGAGTTCATTGATTTGTGTGTGTAAAAGTGCTTA----GTACAATGCCTAGACTTATC---------ATTTATCAATAAATATCATTCTTAAAACTGACCATAAAAATAT---TAGAAAAGTAGAATATCTAGACAATATT-TTAGAAAAAGGGAGCTTAAAGAATTTGGAAAATGTCATTCATCTGTCCAAATGTCTGCCAAGCTAAGGCTCTCACTACAGGGAGAGGTATAGTTTAGATGTTAGAGTGTAAACCCAATTTTTTAATGTGGTCATAGTTATTAATTCTTCATGCCTTGCAAATTGTTGTAATTCAGTAAAAGCCTTTTTT-CATCCTGAAATTTAAAAAAATTATCTAGTGG----TTTCT-----TTTTTGCTTTCATGGATTCACTGTCTTCAAATAAACTTTTGAACTTTGGGGAATTTATG-CCATATGAGG-TTTGAGGTTTTGACTCAACTTCTTTTTTCCCATTTAGATATACAGTTATGGCAA-CCTCTCATTGTATAAATGTACGGGTTATTATTTAATTTCAGAAACAATCACAATATGTTATCCTATTGGATACTAGTTACAAGTTTTCTTTGTTTTATTT------AGATTTCTGAAACTGATGAAAAAGAAGA---CCTGCTGCATGAAAACCTCTTGATGCAAGATGAAATTGCctggctcaggctggaaaaagacacaataagaaaccaaaacc------tggaaaataaatacttaaaagactttgaaattg----tgaaaagaaagcgtgaagaccttCAAAAGGCTCTAAAACGGAATGGGGAAACATTAGCAAAAATGATAGCCTGTTACAGTGGACAGCTTGCTGCTCTGACAGATGAAAACACAACGCTGCATTCCAAACTGGAGAAGCAAAGAGAGAGCAGGCAAAGACTGGAAACAGAAATGCAATCATGTGGTTGTAGACTCAATGCTGCTCTATGTGATCATGATCAAAGTCATTCATCAGAAAGAGATCAAGAGCTTGCTTTCCAGGGCACAGTAGATAAATGGTGTCATTTACAGGAAAATTTGAATGTTTGTAT-TCT--------------------GATTCTTTCTCTCTGCAACTTTCCAAAGCTTGAGAGTAAGTCCAGAGTCCTCGAAACTGAGTTCCATTACACAAGAGAGGCTCTGAAAGAAAAGGCTTTGGTTTTTGAACACGTGCAAAGTGAGCTAAAGCAAAAACAGAGTCGAATGAAGGACACTGAAAAAATGTACAAAAGTGGATACAGTACAATGGAAAAATGCATAGAAAAGCAGGAA------------AGATTTTGTCAACTAAAAAAACAAAATATGTTGCTTCAACAGCAACTGGATGATGCTCGCAACAAAGCTGACAATCAAGAAAAAGCAATACTTAATATTCAAGCCAGATGTCATGCTAGAGTAGAAAGCCTTCAAGCTGAGTGCAGAAAGCACCGTCTTTTACTAGAAGAAAACAGTAAAATGTTGGTCAATGGATTGAATCATTTgaaagaaaaagaacgtcaatatgaaaaagagaaagcagaaagagaaGTAAGTATCAAGAAAAATAAGTATTTTTCAAACTTCCTGAAGCACAATTTAAAGTAATATTTGGTTACAGCTGAATGTTGGATCTAGTTGAATATAAAAAAGGATACATATGATAAATATAACTGCT---------TAGAAACATTCCTTGTTTCCAACAAGTCAAAGTTAGATCTGAGAGATGTTTTCCTCTGATTAAAGTCAATGTGTCACTTataaaatttt--------aagttataaaatgttaa----tatagactaatagtaataatatagtc--atactactgaaataataatttt-----aat s panPan2.chr2A 89843416 1997 + 114371477 CTCATGATTTTCTAAGAAGAGCTTTATAAATTTAATTTTCTTGACTTTTGGTGTCTTGAAATAGAAGATTATTTTTG------------------------------------------TATGTATATATCTACCTCACAGAAGTTAC--TGATTTGGTGGAAGAGCACTAGGAGTAGAGTCAGAAAAGCTGGCAA-AAA-TCCTGCAGCTTGCTTATATTTTTAACCTTTTGCTAT-AGAATTATA--ATTAAATGAGTTCATTGATTTGTGCATGTAAAAGTGCTTACTTAGTACAATGCCTAGACTTATC---------ATTTATCAATAAATGTCATTCTTAAAACTGACCATAACAATAT---TAGAAAAGTAGAATATCTATACAATATT-TTAGAAAAAGGGAACTTAAAGAATTTGGAAAATGTCATTCATCTGTCCAAATATCTGCCAAGCTAAGGTCCTCACTATAGGGAGAGGTATAGTCTAGATGTTAGAGTGTAAACCCAATTTTTTAATGTGGTCATAGTTATTAATTCTTTATGCCTTGCAATTTGTTGTAATTCAGTAAAAGCCTTTTTT-AATCCTGAAATTTAAAAAAATTATCTAGTGG----TTTCT-----TTTTTGCTTTCATGGATTCACTGTCTTCAAATAAACTTTTGAACTTTGGGGAATTTATG-CTGTATGAGG-TTTGAGGTTTTGACTCAACTTCTTTTTTCCCAGTTAGATATCCAGTTATGGCAA-CCTCTTATTGTATAAATGTACAGGTTATTATTTAATTTCAGTAGCAATCACAATATGTTATCCTATTGGATACTAGTTATAAGTTTTCTTTGTTTTACTT------AGATTTCTGAAACTGATGAAAAAGAAGAAGACTTGCTGCATGAAAACCGCTTGATGCAAGATGAAATTGCCAGGCTCAGGCTGGAAATAGACACAATAAAAAACCAAAACC------TGGAAAAGAAATACTTAAAAGACTTTGAAATTGATTGTGAAAAGAAAGCATGAAGACCTTCAAAAGGCTGTAAAACGGAATGGGGAAATATTAGCAAAAACGATAGCCTGTTATAGTGGACTGCTTGCTGCTCTGATGGATGAAAACACAACGCTCCATTCCAAACTGGAGAAGCAAAGAGAGAGCAGGCAAAGACTGGAAAGAGAAATGCAATCATACCGTTGTAGACTGAATGCTGCTCTATGTGATCATGATCAAAGTCACTCATCAGAAAGAGACCAAGAGCTTGCTTTCCAGGGAACAGTAGATAAATTGTGTCATTTACAGGAAAATTTGAATTCTTGTGT-TCT--------------------GATTCTTA------GCAACTTTCTAAAG-TTGAGAGTAAGTCCAGAGTCCTCGAAACTGAGCTCCATTACACAAGAGAGGCTCTGAAAGAAAAGGCTTTGGTTTTGGAACACGTGCAAAGTGAGCTAAAGCAAAAACAGAATCAAATGAAGGACATTGAAAACAGGTACAAAAGTGGATACAATACAATGCAAAAATGCACAGAAAAGCGGGAA------------AGATTTTGTCAACTAAAAAAACAAAATATGTTGCTTCAACAGCACCTGGATGATGCTCGCAACAAAGCTGACAATCAAGAAAAAGCAATACTTAATATTCAAGCCAGATGTGATGCTAGAGTACAAAACCTTCAAGCTGAGTGCAGAAAGCGCTGTCTTTTACTAGAAGAAGACAGTAAAAGGTTGGTAAATGAATTGAATCATTTGAAAGAAAAAGAACGCCAATATGAAAAAGAGCAAGCAGAAAGAAAAGTAAGTATCAAGAAAAATAAGTATTTTTCAAACTTCCTGAAGTAAAATTTAAAGTAATATTTGGTTACAGCTGAATGTTGGATCTAGTTGAATATAAAAAAG-ATACATATGATAAATATATCTGCTATATCAGCTTAGAAACATTCCTTGTTTCCAGCAAGTCAAAGTTAGAACTGAGAGATGCTTTCCTCTGATTAAAGTCAATGTGTCACTTATAAAATTTT--------AAGTTATAAAATGTTAA----TATAGACTAATATTAATAATGTAGTCTTATACTGCTGAAATAATAATTTT-----AAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 859557 1991 - 998796 CTCATGATTTTCTAAGAAGAGCTTTATAAATTTAATTTTCTTGACTTTTGGTGTCTTGAAATAGAAGATTATTTTTG------------------------------------------TATGTATATATCTACCTCACAGAAGTTAC--TGATTTGGTGGAAGAGCACTAGGAGTAGAGTCAGAAAAGCTGGGAA-AAA-TCCTGCAGCTTGCTTATATTTTTAACCTTTTGCTAT-AGAATTATA--attaaatgagttcattgattagtgcatgtaaaagtgctta----gtacaatgcctagacttatc---------atttatcaataaatgtCATTCTTAAAACTGACCATAACAATAT---TAGAAAAGTAGAATATCTATACAATATT-TTAGAAAAAGGGAACTTAAAGAATTTGGAAAATGTCATTCATCTGTCCAAATATCTGCCAAGCTAAGGTTCTCACTATAGGGAGAGGTATAGTCTAGATGTTAGAGTGTAAACCCAATTTTTTAATGTGGTCATAG-TATTAATTCTTTATGCCTTGCAATTTGTTGTAATTCAGTAAAAGCCTTTTTT-AATCCTGAAATTTAAAAAAATTATCTAGTGG----TTTCT-----TTTTTGCTTTCATGGATTCACTGTCTTCAAATAAACTTTTGAACTTTGGGGAATTTATG-CTATATGAGG-TTTGAGGTTTTGACTCAACTTCTTTTTTCCCAGTTAGATATCCAGTTATGGCAA-CCTCTTATTGTATAAATGTACAGGTTATTATTTAATTTCGGTAGCAATCACAATATGTTATCCTATTGGATACTAGTTATAAGTTTTCTTTGTTTTACTT------AGATTTCTGAAACTGATG-AAAAGAAGAAGACTTGCTGCATGAAAACCGCTTGATGCAAGATGAAATTGCCAGGCTCAGGCTGGAAATAGACACAATAAAAAACCAAAACC------TGGAAAAGAAATACTTAAAAGACTTTGAAATTGATTGTGAAAAGAAAGCATGAGGACCTTCAAAAGGCTGTAAAACGGAATGGGGAAACATTAGCAAAAACGATAGCCTGTTATAGTGGACTGCTTGCTGCTCTGATGGATGAAAACACAACGCTCCGTTCCAAACTGGAGAAGCAAAGAGAGAGCAGGCAAAGACTGGAAACAGAAATGCAATCATACCGTTGTAGACTGAATGCTGCTCTATGTGATCATGATCAAAGTCACTCATCAGAAAGAGACCAAGAGCTTGCTTTCCAGGGCACAGTAGATAAATTGTGTCATTTACAGGAAAATTTGAATTCTTGTGT-TCT--------------------GATTCTTA------GCAACTTTCTAAAG-TTAAGAGTAAGTCCAGAGTCCTCAAAACTGAGCTCCATTACACAAGAGAGGCTCTGAAAGAAAAGGCTTTGGTTTTGGAACACGTGCGAAGTGAGCTAAAGCAAAAACAGAGTCAAATGAAGGACATTGAAAACAAGTACAAAAGTGGATACAATACAATGGAAAAATGCATAGAAAAGCAGGAA------------AGATTTTGTCAACTAAAAAAACAAAATATGTTGCTTCAACAGCAACTGGATGATGCTCGCAACAAAGCTGACAATCAAGAAAAAGCAATACTTAATATTCAAGCCAGATGTGATGCTAGAGTACAGAACCTTCAAGCTGAGTGCAGAAAGCGCCGTCTTTTACTAGAAGAAGACAGTAAAATGTTGGTAAATGAATTGAATCATTTGAAAGAAAAAGAACGCCAATATGAAAAAGAGCAAGCAGAAAGAGAAGTAAGTATCAAGAAAAATAAGTGTTTTTCAAACTTCCTGAAGTAAAATTTAAAGTAATATTTGGTTACAGCTGAATGTTGGATCTAGTTGAATATAAAAAAG-ATACATATGATAAATATATCTGCTATATCAGCTTAGAAACATTCCTTGTTTCCAGCAAGTCAAAGTTAGAACTGAGAGATGCTTTCCTCTGATTAAAGTCAATGTGTCACTTATAAAATTTT--------AAGTTATAAAATGTTAA----TATAGACTAATATTAATAATGTAGTCTTATACTGCTGAAATAATAATTTT-----GAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47855753 1988 + 94967081 CTCATGATTTTCTAAGAAGAGCTTTATAAATTTAATTTTCTTGACTTTTGGTGTCTTGAAATAAAAGATTATTTTTG------------------------------------------TATGTATATATCTACCTCACAGAAGTTAC--AGATTTGGTGGAAGAGCACTAGGAGTAGAGTGAGAAAAGCTGGGAA-AAA-TCCTGCAGCTTGCTTATATTTTTAACCTTTTGCTAT-AGAATTATA--ACTAAATGAGTTCATTGATTTGtgcatgtaaaagtgctta----gtacaatgcctATACTTATC---------ATTTATCAATAAATGTCATTCTTAAAACTGACCATAACAATAT---TAGAAAAGTAGAATATCTATACAATATT-TTAGAAAAAGGGAACTTAAAGAATTTGGAAAATGTCATTCATCTGTCCAAATATCTGCCAAGCTAATGCTCTCACTATAGGGAGAGGTATAGTTTAGATGTTAGAGTGTAAACCCAATTTTTTAATGTGGTCATAGTTATTAATTCTTTATGCCTTGCAATTTGTTTTAATTCATTAAAAGCTTTTTTT-AATCCTGAATTTTAAAAAAATTATCTAATGG----TTTCT-----TTTTTGCTTTCATGGATTCACTGTCTTCAAATAAACTTTTGAACTTTGGGGAATTTATG-CTGTATGAGG-TTTGAGGTTTTGACTCAACTTCTTTTTTCCCAGTTAGATATCCAGTTATGGCAA-CCTCTCATTGTATAAATGTACAGGTTATTATTTAATTTCAGAAGCAATCACAATATGTTATCCTGTTGGATACTAGTTACAAGTTTTCTTTGTTTTACTT------AGATTTCTGAAACTGATGAAAAAGAAGAAGACCTGCTGCATGAAAACCGCTTGATTCAAGATGAAATTGCCAGGCTCAGGCTGGATATAGACACAATAAAAAACCAAAACC------TGGAAAAGAAATACTTAAAAGACTTTGAAATTG----TGAAAAGAAAGCATGAAAACCTTCAAAAGGCTGTAAAACGGAGTGAGGAAACATTAGCAAAAACAATAGGCTGTTATAGTGGACAGCTTGCTGCTCTGACAGATGAAAACACAACACTCCGTTCCAATCTGGAGAAGCAAAGAGAGAGCAGGCAAAGACTGGAAACAGAAATGCAATCATACCGTTGTAGACCAAATGCTGCCCTATGTGATCGTGATCAAAGTCACTCATCAAAAAGAGACCAAGAGCTTGCTTTCCAGGGCACAGTAGATAAATGGTGTCATTCACTGGACAATTTTAATTCTTGCGT-TCT--------------------GATTCTTT--CTCAGCAAATTTCTAAAG-CTGAGAGTAAGTCCAGAGTCCTCAAAACTGAGCTCCATTACACAAGAGAGGCTCTGAAAGAAAAGGCTTTGGTTTTTGAACACGTGCAAAGTGAGCTAAGGCAAAAACAGAGTCTAATGAAGGACATTGAAAAAATGTACAAAAGTGGATACGATACAATGGAAAAATGCAGAGAAAAGCAGGAA------------AGATTTTGTCAACTAAACAAACAAAATATGTTGCTTCAACAGCAACTGGATGATGCTCGCAACAAAGCTGACAATCGAGAAAAAGCAATACTTAATATTCAAGCCAGAGGTGATGCTAGAGTACAAAACCTTCAAGCTGAGTGCAGAAAGCGCCGTCTTTTACTAGAAGAAGACAATAAAATGTTGGTCAATGAATTGAATCATTTGAAAGAACAAGAATGCCAATATGAAAAAGAGAAAGCAGAAAGAGAAGTAAGTATCAAGAAAAATAAGTATTTTTCAAACTTCCTGAAGTAAAATTTAAAGTAATATTTGGTTACAGCTGAATGTTGGATCTAGTTGAATATAAAAAAGGATACATATGATAAATATATCTGCTATATCAGCTTAGAAACATTCTTTGTTTCCAGCAAGTCAAAGTTAGAACTGAGAGATGCTTTCCTCTGATTAAAGTCAATGTGTCACTTATAAAATTTT--------AAGTTATAAAATGTTAA----TATAGAC------TAATAATGTAGTCTTATACTGCTGAAATAATAATTTT-----AAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108557693 1990 + 108979918 CTCATGATTTTCTAGGAAGAGCTTTATAAATTTAATTTTCTTGACTTTTGGTGTTTTGAAATAAAAGATTATTTTTG------------------------------------------TATGTCTATATCTACCTCACAGAAGTAAC--GGATTTGGTGGAAGAGCACTAGAAGTAGAGTCAGAAAAGCTGGGAA-AAG-TCCTGCAGCTTGCTTATATTTTTAACCTTTTGCTAT-AGAATTATA--ACTACATGAGTTCATTGATTTGTGCATGTAAAAGTGCTTA----GTACAATATCTAGACTTATC---------ATTTATCAATAAATGTCATTCTTAAAACTGACCATAACAATAT---TAGAAAAGTAGAATATCTATACAATATT-TTAGGAAAAGGGAAGTTAAAGAATTTGGAAAATGTCATTCATCTGTCCAAATATCTGCCAGGCTAAGGCTCTCACTATAGGGAGATGTATAGCTTAGATGTTAGAGTGTAAACCCAATTTTTTAACGTGATCATAGTTATTAATTCTTTATGCTTTGCAATTTGTTGTAATTCAGTAAAAGCCTTTTTT-AATTCTGAAATTTAAAAAAATTTTCTAGTGG--TTTTTTT-----TTTTTGCTTTCATGGATTCACTGTCTTCAAATAAACTTTCAAACTTTGGGGAATTAATG-CTTTTTGAGG-TTTGAGGTTTTGACTCAACTTCTTTTTTCCCAGTTAGATACCCAGTTATGGCAACCCTCTCATTGTATAAATGCACAGGTTATTATTTAATTTCAAAAGCAATCACAATATGTTATCCTATTGGGTACTAGTTATAAGTTTTCTTTGTTTTACTT------AGATTTCTGATACTGATAAAAAAGAAGAAGATCTGCTACATGAAAACCACTTGATGGAAGATGAAATTGCCACGCTCAGACTGGAAATAGACACAATAAAAAACCAAAACC------TGGAAAAGAAATACTTAAAAGACTTTGAAATTA----TGAAAAGAAAGCATGAAGACCTTCAAAAGACGCTAAAACGGAATGGGGAAACATTAGCAAAAACGATAGCTGATTATAGTGTACAGCTTGCTGCTCTGACAGATGAGAACGCAACGCTCCGTTCCAAACTGGAGAAGGAAACACAGACCAGGCAAATACTGGAAACAGAAACGGAATCATACCGTTGTAGACTGAATGCTGCTCTATCTGATCATGATCAAAGTCACTCATCAGAAAGAGACCAAGAGCTTGCTTTCCAGGGCACAGTAGATAAATGGTGTCATTTACAGGAAAATTCGAATTCTTGTGT-TCT--------------------GACTCTTT--CTCAGCAACTTTCTAAAG-CTGAGAGTAAGTTCAGAGTCCTCGAAACTGAGCTCCATTACACAAGAGAGGCTCTGAAAGAAAAGTCTTCGGTTTTTGAACATGTACAAAGAGAACTAAACCAAAAACAGTGTCAAATGAAGGACATTGAAAAAATGTACAAAAATGAATATGATAAAATGGAAAAATGCATAGAAAAGCAGGAA------------AGATTTTGTCAACTAAAAAAACAAAATATGTTACTTCAACAGCAACTGGATGACGCTCGCAACAAAGCTGACAATCGAGAAAAAGCAATACTTAATATTCAAGCCAGATGTGATGCTAGAGTACAAAACTTTCAAGCTGAGTGCAGAAAGCACCGTCTTTTACTACAAGAAGACAATAAGAGGTTGGTCAATGAATTGAATCATTTGaaagaaaaagaatgccaaaatgaaaaagagaaagcagaaagagaaGTAAGTGTCAAGAAAAATAAGTATTTTTCAAACTTCCTGAAGTAAAATTTGAAGTAATATTTGGTTACAGTTAAATGTTGGATCTAGTTGAATATAAAAAAGGATACATATGATAAATGTATCTGCTGTATCAGCTGAGAAACATTCCTTGTTTCCAGCAAGTCAGAGTTAAAACT--GAGATTCTTTCCTCTGATTAAATTC-ATGTGTCACTTATACAATTTT--------AAGTTATAAAATGTTAA----AGTAGACTAATATTAATAATGTAGCCTTATACTGCTGAAATAATAATTT--------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17694471 1977 + 111193037 CTCATGATTTTCTAGGAAGAGCTTTATAAATTTAATTTTCTTGACTTTTGGTGTTTTGAAATAAAAGATTATTTTTG------------------------------------------TATGTCTATATCTACCTCACAGAAGTAAC--GGATTTGGTGGAAGAGCACTAGAAGTAGAGTCAGAAAAGCTGGGAA-AAG-TCCTGCAGCTTGCTTATATTTTTAACCTTTTGCTAT-AGAATTATA--ACTACATGAGTTCATTGATTTGTGCATGTAAAAGTGCTTA----GTACAATATCTAGACTTATC---------ATTTATCAATAAATGTCATTCTTAAAACTGACCATAACAATAT---TAGAAAAGTAGAATATCTATACAATATT-TTAGGAAAAGGGAAGTTAAAGAATTTGGAAAATGTCATTCATCTGTCCAAATATCTGCCAGGCTAAGGCTCTCACTATAGGGAGATGTATAGCTTAGATGTTAGAGTGTAAACCCAATTTTTTAACGTGATCATAGTTATTAATTCTTTATGCTTTGCAATTTGTTGTAATTCAGTAAAA--TTTTTTT-AATTCTGAAATTTAAAAAAATTTTCGAGTGG--TTTTTTT-----TTTTTGCTTTCATGGATTCACTGTCTTCAAATAAACTTTCAAACTTTGGGGAATTAATG-CTTTTTGAGG-TTTGAGGTTTTGACTCAACTTCTTTTTT------------CCCAGTTATGGCAACCCTCTCATTGTATAAATGCACAGGTTATTATTTAATTTCAAAAGCAATCACAATATGTTATCCTATTGGGTACTAGTTATAAGTTTTCTTTGTTTTACTT------AGATTTCTGATACTGATAAAAAAGAAGAAGATCTGCTACATGAAAACCACTTGATGGAAGATGAAATTGCCACGCTCAGACTGGAAATAGACACAATAAAAAACCAAAACC------TGGAAAAGAAATACTTAAAAGACTTTGAAATTA----TGAAAAGAAAGCATGAAGACCTTCAAAAGATGCTAAAACGGAATGGGGAAACATTAGCAAAAACGATAGCTGATTATAGTGTACAGCTTGCTGCTCTGGCAGATGAGAACGCAACGCTCCGTTCCAAACTGGAGAAGGAAACACAGACCAGGCAAATACTGGAAACAGAAACGGAATCATACCGTTGTAGACTGAATGCTGCTCTATCTGATCATGATCAAAGTCACTCATCAGAAAGAGACCAAGAGCTTGCTTTCCAGGGCACAGTAGATAAATGGTGTCATTTACAGGAAAATTCGAATTCTTGTGT-TCT--------------------GACTCTTT--CTCAGCAACTTTCTAAAG-CTGAGAGTAAGTTCAGAGTCCTCGAAACTGAGCTCCATTACACAAGAGAGGCTCTGAAAGAAAAGTCTTTGGTTTTTGAACATGTACAAAGAGAACTAAACCAAAAACAGTGTCAAATGAAGGACATTGAAAAAATGTACAAAAATGAATATGATAAAATGGAAAAATGCATAGAAAAGCAGGAA------------AGATTTTGTCAACTAAAAAAACAAAATATGTTACTTCAACAGCAACTGGATGATGCTCGCAACAAAGCTGACAATCGAGAAAAAGCAATACTTAATATTCAAGCCAGATGTGATGCTAGAGTACAAAACTTTCAAGCTGAGTGCAGAAAGCACCGTCTTTTACTACAAGAAGACAATAAGAGGTTGGTCAATGAATTGAATCATTTGaaagaaaaagaatgccaaaatgaaaaagagaaagCAGAGAGAGAAGTAAGTGTCAAGAAAAATAAGTATTTTTCAAACTTCCTGAAGTAAAATTTGAAGTAATATTTGGTTACAGCTAAATGTTGGATCTAGTTGAATATAAAAAAGGATACATATGATAAATGTATCTGCTATATCAGCTGAGAAACATTCCTTGTTTCCAGCAAGTCAGAGTTAAAACTGAGAGATTCTTTCCTCTGATTAAATTC-ATGTGTCAGTTATACAATTTT--------AAGTTATAAAATGTTAA----TGTAGACTAATATTAATAATGTAGCCTTATACTGCTGAAATAAT--TTTT-------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10560122 1997 - 11597128 CTCATGATTTTCTAGGAAGAGCTTTATAAATTTAATTTTCTTGACTTTTGGTGTTTTGAAATAAAAGATTATTTTTG------------------------------------------TATGTCTATATCTACCTCACAGAAGTAAC--GGATTTGGTGGAAGAGCACTAGAAGTAGAGTCAGAAAAGCTGGGAA-AAG-TCCTGCAGCTTGCTTATATTTTTAACCTTTTGCTAT-AGAATTATA--ACTACATGAGTTCATTGATTTGTACATGTAAAAGTGCTTA----GTACAATATCTAGACTTATC---------ATTTATCAATAAATGTCATTCTTAAAACTGACCATAACAATAT---TAGAAAAGTAGAATATCTATACTATATT-TTAGGAAAAGGGAAATTAAAGAATTTGGAAAATGTCATTCATCTGTCCAAATATCTGCCAGGCTAAGGCTCTCACTATAGGGAGATGTATAGCTTAGATGTTAGAGTGTAAACCCAATTTTTTAACATGATCATAGTTATTAATTCTTTATGCTTTGCAATTTGTTGTAATTCAGTAAAAGCCTTTTTT-AATTCTGAAATTTAAAAAAATTTTCGAGTGG-TTTTTTTT-----TTTTTGCTTTCATGGATTCACTGTCTTCAAATAAACTTTCAAACTTTGGGGAATTAATG-CTTTTTGAGG-TTTGAGGTTTTGACTCAACTTCTTTTTTCCCAGTTAGATACCCAGTTATGGCAACCCTCTCATTGTATAAATGCACAGGTTATTATTTAATTTCAAAAGCAATCACAGTATGTTATCCTATTGGGTACTAGTTATAAGTTTTCTTTGTTTTACTT------AGATTTCTGATACTGATAAAAAAGAAGAAGATCTGCTACATGAAAACCACTTGATGGAAGATGAAATTGCCACGCTCAGACTGGAAATAGACACAATAAAAAACCAAAACC------TGGAAAAGAAATACTTAAAAGACTTTGAAATTA----TGAAAAGAAAGCATGAAGACCTTCAAAAGACGCTAAAACGGAATGGGGACACATTAGCAAAAACGATAGCTGATTATAGTGTACAGCTTGCTGCTCTGACAGATGAGAACGCAACGCTCCGTTCCAAACTGGAGAAGGAAACACAGACCAGGCAAATACTGGAAACAGAAACGGAATCATACCGTTGTAGACTGAATGCTGCTCTATCTGATCATCATCAAAGTCACTCATCAGAAAGAGACCAAGAGCTTGCTTTCCAGGGCACAGTAGATAAATGGTGTCATTTACAGGAAAATTCGAATTCTTGTGT-TCT--------------------GACTCTTT--CTCAGCAACTTTCTAAAG-CTGAGAGTAAGTTCAGAGTCCTCGAAACTGAGCTCCATTACACAAGAGAGGCTCTGAAAGAAAAGTGTTTGGTTTTTGAACATGTACAAAGAGAACTAAACCAAAAACAGTGTCAAATGAAGGACATTGAAAAAATGTACAAAAATGAATATGATAAAATGGAAAAATGCATAGAAAAGCAGGAA------------AGATTTTGTCAACTAAAAAAACAAAACATGTTACTTCAACAGCAACTGGATGATGCTCGCAACAAAGCTGACAATCGAGAAAAAGCAATACTGAATATTCAAGCCAGATGTGATGCTAGAGTACAAAACTTTCAAGCTGAGTGCAGAAAGCACCGTCTTTTACTACAAGAAGACAATAAGAGGTTGGTCAATGAATTGAATCATTTgaaagaaaaagaatgccaaaatgaaaaagagaaagcagagagagaaGTAAGTGTCAAGAAAAATAAGTATTTTTCAAACTTCCTGAAGTAAAATTTGAAGTAATATTTGGTTACAGCTAAATATTGGATCTAGTTGAATATAAAAAAGGATACATATGATAAATGTATCTGCTATATCAGCTGAGAAACATTCCTTGTTTCCAGCAAGTCAGAGTTAAAACTGAGAGATTCTTTCCTCTGATTAAATTC-ATGTGTCACTTATACAATTTT--------AAGTTATAAAATGTTAA----TGTAGACTAATATTAATAATGTAGCCTTATACTGCTGAAATAAT--TTTTTTCAT--- i macNem1.NW_012014799v1 C 0 I 6 s cerAty1.NW_012001187v1 5049479 1998 - 5626091 CTCATGATTTTCTAGGAAGAGCTTTATAAACTTAATTTTCTTGACTTTTGGTGTTTTGAAATAAAAGATTATTTTTG------------------------------------------TATGTCTATATCTACCTCACAGAAGTAAC--TGATTTGGTGGAAGAGCACTAGAAGTAGAGTCAGAAAAGCTGGAAA-AAG-TCCTGCAGCTTGCTTATATTTTTAACCTTTTGCTAT-AGAATTATA--actaaatgagttcattgatttgtgcatgtaaaagtgctta----gtacaatgtctagacttatc---------atttatcaataaatgtCATTCTTAAAACTGACCATAACAATAT---TAGAAAAGTAGAATATCTATACAATATT-TTAGGAAAAGGGAAGTTAAAGAATTTGGAAAATGTCATTCATCTGGCCAAATATCTGCCAGGCTAAGGCTCTCACTATAGGGAGATGTATAGCTTAGATGTTAGAGTGTAAACCCAATTTTTTAACGTGATCATAGTTATTAATTCTTTATGCTTTGCAATTTGTTGTAATTCAGTAAAAGCCTTTTTT-AATTCTGAAATTTAAAAAAATTTTCTAGTGGTTTTTTTTT-----TTTTTGCTTTCATGGATTCACTGTCTTCAAATAAACTTTCAAACTTTGGGGAATTAATG-CTTTTTGAGG-TTTGAGGTTTTGACTCAACTTCTTTTTTCCCAGTTAGATATCCAGTTATGGCAACCCTCTCATTGTATAAATGCACAGGTTATTATTTAATTTCAAAAGCAATCACAATATGTTATCCTATTGGGTACTAGTTATAAGTTTTCTTTGTTTTACTTAGAAACAGATTTCTGATACTGATAAAA---AAGAAGACCTGCTGCATGAAAACCACTTGATGGAAGATGAAATTGCCACGCTTAGACTGGAAATAGACACAATAAAAAACCAAAACC------TGGAAAAGAAATACTTAAAAGACTTTGAAATTA----TGAAAAGAAAGCATGAAGACCTTCAAAAGACTCTAAAACGGAATGGGGAAACATTAGCAAAAACGATAGCTGATTATAGTGTACAGCTTGCTGCTCTGACAGATGAGAACGCAACGCTCCGTTCCAAACTGGAGAAGGAAACACAGACCAGGCAAAGACTGGAAACAGAAACGGAATCATACCGTTGTAGACTGAATGCTCCTCTATCTGATCATGATCAAAGTCACTCATCAGAAAGAGACCAAGAGCTTGCTTTCCAGGGCACAGTAGATAAATGGTGTCATTTACAGGAAAATTCGAATTCTTGTGT-TCT--------------------GACTCTTT--CTCAGCAACTTTCTAAAG-CTGAGAGTAAGTTCAGAGTCCTCGAAACTGAGCTCCATTACACAAGAGAGGCTCTGAAAGAAAAGTCTTTGGTTTTTGAACATGTACAAAGAGAACTAAACCAAAAACAGTGTCAAATGAAGGACATTGAAAAAATGTACAAAAATGAATATAATAAAATGGAAAAATGCATAGAAAAGCAGGAA------------AGATTTTGTCAACTAAAAAAACAAAATATGTTACTTCAACAGCAACTGGATGATGCTCTCAACAAAGCTGACAATCGAGAAAAAGCAATACTTAATATTCAAGCCAGATGTGATGCTAGAGTACAAAACTTTCAAGCTGAGTGCAGAAAGCACCGTCTTTTATTACAAGAAGACAGTAAGAGGTTGGTCAATGAATTGAATCATTTGaaagaaaaagcacgccaaaatgaaaaagagaaagcagaaagagaaGTAAGTGTCAAGAAAAATAAGTATTTTTCAAACTTCCTGAAGTAAAATTTGAAGTAATATTTGGTTACAGCTAAATGTTGGATCTAGTTGAATATAAAAAAGGATACATATGATAAATGTATCTGCTATATCAGCTGAGAAACATTCCTTGTTTCCAGCAAGTCAAAGTTAAAACTGAGAGATTCTTTCCTCTGATTAAATTC-ATGTGTCACTTATACAATTTT--------AAGTTATAAAATGTTAA----TGTAGACTAATATTAATAATGTAGTCTTATACTGCTGAAATAATAATTTT-------- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16528737 1998 + 107702431 CTCATGATTTTCTAAGAAGAGCTTTATAAATTTAATTTTCTTGACTTTTGGTGTTTTGAAATAAAAGATTATTTTTG------------------------------------------TATGTCTATATCTACCTCACAGAAGTAAC--TGATTTGGTGGAAGAGCACTACAAGTAGAGTCAGAAAAGCTGGGAA-AAG-TCCTGCAGCGTGTTTATATTTTTAACCTTTTGCTAT-AGAATTATA--actaaatgagttcattgatttgtgcatgtaaaagtgctta----gtacaatgcctagacttatc---------atttatcaataaatgtCATTCTTAAAACTGACCATAACAATAT---TAAAAAAGTA-AATATCTATACAATATT-TTAGAAAAAGGGAAGTTAAAGAATTTGGAAAATGTCATTCATCTGTCCAAATATCTGCCAAGCTAAGGCTCTCACTATAGGGAGATGTATAGCTTAGATGTTAGAGTGTAAACCCAATTTTTTAACGTGATCATAGTTATTAATTCTTTATGCTTTGCAATTTGTTGTAATTCAGTAAAAGCCTTTTTT-AATTCTGAAATTTAAAAAAATTTTCTAGTGG-TTTTTTTTTTTTCTTTTTGCTTTCATGGGTTCATTGTCTTCAGATAAACTTTCGAACTTTGGGGAATTAATG-CTTTTTGAGG-TTTGAGGTTTTGACTCAACTTCTTTTTTCTGAGTTAGATATCCAGTTATGGCAACCCTCTCATTGTATAAATGCACAGGTTATTATTTAATTTCAAGAGCAATCACAATATGTTATCCTATTGGGTACTAGTTACAAGTTTTCTTTGTTTTACTT------AGATTTCTGACACTGATAAAAAAGAAGAAGACCTGCTGCATGAAAACCACTTGATGGAAGATGAAATTGCCACGCTCAGACTGGAAATAGACACAATAAAAAACCAAAACC------TGGAAAAGAAATACTTAAAAGACTTTGAAATTA----TGAAAAGAAAGCATGAAGACCTTCAAGAGACTCTAAAACGGAATGGGGAAACATTAGCAAAAACGATAGCTGATTATAGTGTACAGCTTACTGCTCTGACAGATGAGAACGCAACGCTCCGTTCCAAACTGGAGAAGGAAACACAGAGCAGGCAAAGACTGGAAACAGAAACGGAATCATACCATTGTAGACTGAATGCTGCTCTATCTGATCATGATCAAAGTCACTCATTAGAAAGAGACCAAGAGCTTGGTTTCCAGGGCACAGTAGATAAATGGTGTCATTTACAGGAAAATTCGAATTCTTGTGT-TCT--------------------GACTCTTT--CTCAGCAACTTTCTAAAG-CTGAGAGTAAGTTCAGAGTCCTTGAAACTGAGCTCCATTACACAAGAGAGGCTCTGAAAGAAAAGTCTTTGGTTTTTGAACATGTACAAAGAGAACTAAACCAAAAACAGTGTCAAATGAAGAACATTGAAAAAATGTACAAAAATGAATATGATAAAATGGAAAAATGCATAGAAAAGCAGGAA------------AGATTTTGTCAACTACAAAAACAAACTATGTTAATTCAACAGCAACTGGATGATGCTCGCAACAAAGCTGACAATCAAGAAAAAGCAATACTTACTATTCAAGCCAGATGTGATGCTAGAGTACAAAACTTTCAAGCTGAGTGCAGAAAGCACCGTCTTTTATTACAAGAAGACACTAAGAGGTTGGTCAAGGAATTGAATCATTTGaaagaaaaagaacgccaaaatgaaaaagagaaagcagaaagagaagtaagtgtcaagaaaaataaaTATTTTTCAAACTTCCTGCAGTAAAATTTGAAGTAATATTTGGTGACAGCTAAATGTTGGATCTAGTTGAATATAAAAAAGGATACATATGATAAATGTATCTGCTATATCAGCTTAGAAACATTCCTTGTTTCCAGCAAGTCAGAGTTAAAACTGAGAGATTCTTTCCTCTGATTAAATTC-ATGTGTCACTTACACAATTTT--------AAGTTATAAAATGTTCA----TGTAGACTAATATTAATAATGTAGCCTTATACTGCTGAAATAATAATTTT-------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 336119 1997 - 409142 CTCATGATTTTCTAGGAAGAGCTTTATAAACTTAATTTTCTTGACTTTTGGTGTTTTGAAATAAAAGATTATTTTTG------------------------------------------TATGTCTATATCTACCTCACAGAAGTAAC--TGATTTGGTGGAAGAGCACTAGAAGTAGAGTCAGAAAAGCTGGAAA-AAG-TCCTGCAGCTTGCTTATATTTTTAACCTTTTGCTAT-AGAATTATA--actaaatgagttcattgatttgtgcatgtaaaagtgctta----gtacaatgtctagacttatc---------atttatcaataaatgtCATTCTTAAAACTGACCATAACAATAT---TAGAAAAGTAGAATATCTATACAATATT-TTAGGAAAAGGGAAGTTAAAGAATTTGGAAAATGTCATTCATCTGTCCAAATATCTGCCAGGCTAAGGCTCTCACTATAGGGAGATGTATAGCTTAGATGTTAGAGTGTAAACCCAATTTTTTAACGTGATCATAGTTATTAATTCTTTATGCTTTGCAATTTGTTGTAATTCAGTAAAAGCCTTTTTT-AATTCTGAAATTTGTAAAAATTTTCTAGTGG-TTTTTTTT-----TTTTTGCTTTCATGGATTCACTGTCTTCAAATAAACTTTCAAACTTTGGGGAATTAATG-CTTTTTGAGG-TTTGAGGTTTTGACTCAACTTCTTTTTTCCCAGTTAGATATCCAGTTATGGCAACCCTCTCATTGTATAAATGCACAGGTTATTATTTAATTTCAAAAGCAATCACAATATGTTATCCTATTGGGTACTAGTTATAAGTTTTCTTTGTTTTACTTAGAAACAGATTTCTGATACTGATAAAA---AAGAAGACCTGCTGCATGAAAACCACTTGATGGAAGATGAAATTGCCACGCTTAGACTGGAAATAGACACAATGAAAAACCAAAACC------TGGAAAAGAAATACTTAAAAGACTTTGAAATTA----TGAAAAGAAAGCATAAAGACCTTCAAAAGACTCTAAAACGGAATGGGGGAACATTAGCAAAAACGATAGCTGATTATAGGGTACAGCTTGCTGCTCTGAAAGATGAGAACGCAACGCTCCGTTCCAAACTGGAGAAGGAAACACAGACCAGGCAGAGACTGGAAACAGAAACGGAATCATACCGTTGTAGACTGAATGCTGCTCTATCTGATCATGATCAAAGTCACTCATCAGAAAGAGACCAAGAGCTTGCTTTCCAGGGCACAGTAGATAAATGGTGTCATTTACAGGAAAATTTGAATTCTTGTGT-TCT--------------------GACTCCTT--CTCAGCAACTTTCTAAAG-CTGAGAGTAAGTTCAGAGTCCTCGAAACTGAGCTCCGTTACACAAGAGAGGCTCTGAAAGAAAAGTCTTTGGTTTTTGAACATGTACAAAGAGAACTAAACCAAAAACAGTGTCAAAGGAAGGACATTGAAAAAATGTACAAAAATGAATGTGATAAAGTGGAAAAATGCATAGAAAAGCAGGAA------------AGATTTTGTCAACTAAAAAAACAAAATATGTTACTTCAACAGCGACTGGATGATGCTCGCAACAAAGCTGACAATCGAGAAAAAGCAATACTTAATATTCAAGCCAGATGTGATGCTAGAGTACAAAAGTTTCAAGCTGAGTGCAGAAAGCACCGTCTTTTATTACAAGAAGACAATAAGAGGTTGGTCAATGAATTGAATCATTTGaaagaaaaagcacgccaaaatgaaaaagagaaagcagaaagagaaGTAAGTGTCAAGAAAAATAAGTATTTTTCAAACTTCCTGAAGTAAAATTTGAAGTAATATTTGGTTACAGCTAAATGTTGGATCTAGTTGAATATAAAAAAGGATACATATGATAAATGTATCTGCTATATCAGCTGAGAAACATTCCTTGTTTCCAGCAAGTCAGAGTTAAAACTGAGAGATTCTTTCCTCTGATTAAATTC-ATGTGTCACTTATACAATTTT--------AAGTTATAAAATGTTAA----TGTAGACTAATATTAATAATGTAGTCTTATACTGCTGAAATAATAATTTT-------- i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14834618 1975 + 108792865 CTCTTGATTTTCTCTGAAGAGCTCAATATATTTAATTTTCTTGACTTTTGGTGTTTGACTTGAAAACACTATTTTTG------------------------------------------TGTGTGTATATCTACCTGACAAAATTAAC--TGATTTGGTGGAAGAGCAGTAGAAGTAGAGTCAGAAAACCTGGGGA-AAATTCCTGCAGCTTGCTTATATTTTTAAACTTTCACTAT-AGAATTATA--actaaatgagttcattgacttgtgcatgtacaagggctta----gtacaatgcctagatatatc---------atttatcagtaaatgtCATTCTTAACACTGACCATAACAATAT---TAGAAATGTAGAATATCTATACAGTATT-TTAGGAAAGAGGAACTTAAAGAATTTGGAAATTTTTATTCATCTGTCCAAATATCTGCCAAGCTGACGCTCTTACTCCAGGGAAAAGCATAGATTAGGTGTAAGAGTACAAACCCAGTTTTATAATATAGTCTCAGTTATTACTCGTTTATGCCTTGGGCTTTGTTGTAATTCAGTAAAAGCCTTTTTTAAATTCTGAGA-TTAAAAAAAATATTTAGCAG----TTTCT-----TTTTTGCATTCATAGATTCACTGTCTTCAAAA----TTTTAAACTTTGGGGAATTCAAACCTCTATTAGG-TTTGAGGTTTTGACTCAACTTTTTTTCCAG----TAGATATCCAGTTATGACAACCCTCTCATTGCATAAATGTACAGGTTATTATTTAATTTCAGAAGCAATCATAATATGTTATCCTATTGGGTACTAGTTAAAAGTTTTCTTTCTTTTGCTT------AGATTTCTGATAGTCATGAAAAAGAAGAAGACCTGTTGCATGAAAACCACTTGATGCAAGATGAAATTGCCAGGCTTCAGCTGGAAATAGACACACTTAAAAATCAAAACC------TGGAAAAGAAATACTTAAAAGACATTGAAATTA----TAAAAGGGAGGAATGAAGACCTTAGAAAGACTCTAAAATGGAATATGGAAACATTAACAAAAATGATGGCCTGTTCTAGTGGACGGCTTACTGCTCTGACAGATGAGAACACAATGCTCCGTTCCAAACTGGAGAAGGAAAAGGAAAGCAACCAAAGACTGGAAACAGAAATTGAATCATACCGTTGTAGACTGAATGCTGTTCTATGTGATCATGATCAAAGTCAGTCATCAGAAAGAGACCAAGAGCTTGCTTTCCAGGGCACAGTAGATAAATGGTGTCATTTACAGGAAAATTTGAATTCTCATGT-TCT--------------------GTTTCTTT--CTCAGCAACTTTCTAAAG-CCGAGAGTAAGTCCAAAGGCCTCGAAACTGAACTCTGTTACACAAGAGAGGCTCTGAAAGAAAAGACTTTGGTTTTTGAATGCATGCAAAGAGACCTAAACCAAACACAGTGTCAAATGAAGGACATTGAAAAAAAGTACAAAAATTGCCAAGATAAAGTAGAAAAATGCATAGAAAAGCAGGAA------------AGATTATGTCAACTACATAGACAGAGTATGTTGCTTCAAAAGCAACTGAATGATGCTCACAACAAAGCTGACAATCAAGAAAAAACATTAATTAATATTCAAGCCAAATGTGATGCCAGAGTACAAAGTGTTCAAGCTGAGTGCAGAAAGCGCTCTGTTTTGCTAGAAGAAGAGAATAAGAGGTTGATCAATGAAGTCAATCATTTGAAAGAAAAGCAATGTCAGTATGAAAGAGAGAAAGCAGAAAGAGAAGTGAGTATCAAGAAAAATAAGTATTTTTCAAACTTCCTGAAGTAAAATTTAAAGTGATATTTGGTTACAGCTAAATGTTGAATCTAGTTGAATATAAAAAA-GATACATATGATAAATATATCTGCTATATCAGCTTAGAAACATTCCTTGTTTCCAGCACATCAAAGTTAGAACTGAGAAATGCTTTCCTCTGATTAAAGTCAGTGTGTCACTTATGAAATTTT--------AAGTTAT--------------TATAGACTAATAT---TAATGTAGTCTTATACTGCTGAAATAATAATTTT-----AAT i calJac3.chr14 M 148 C 0 s saiBol1.JH378124 27273417 1969 - 28799539 CTCATGATTTTCTAAGGGGAGCTCAATAAATTTAATATTCTTGACTTTTGGTGTTTGGAAATAAAAGACTATTTTTG------------------------------------------TATGTGTATATCTACCTAACAGAAGTCAC--TGATTTGGTGGAAGAGCACTAGAAGTAGAGTCAGAAAACCTGGGGG-AAA-TCCTGCAGCTTGCTTATATTTTTAAACTTTCACTAT-AGAATTATA--ACTAAATGAGTTCATTGATCTGTGCATATAGAAGTGCTTA----GTACAATGCTTAGATATATT---------ATTTATCAGTAAATGTCATTCTTAAAACTGACCATAACAGTAT---TAGAAAAGTAGAATATCTATACAGTATT-TTAGGAAAAAAGAACTTAAAGAATTTGGAAAATTTCATTCATCTGTCCAAATATCTACCAAGCTAATGCTCTTACCCTAGGGAGAAGCATAGATTAGGTGTTAGAATGCAAACTCAGTTTTATAATATAGTCGTAGTTATTACTCCTTTATGCCTTGGGGTTTGTTGTAATTCAGTAAAAGCCTTTTTTAAATTCTGAGATTTAAAAAAATTATTTAGTGG----TTTCT-----TTTTTGCCTTCATGGATTCACTGTCTTCAAAT----TTTTAAACTTTGGGGAATTCAAACCTCTATGAGG-TTTGAGGTTTTGACTCAACTTTTTTTTTTC----CAGTTAG--AGTTATGGCAACCCTCTCATTATATAAATGTACAGGTTATTATTTAATTTCAGAAGCAATCATAATATGTTATCCTATTGGGTACTAGTTAAAAGTTTTCTTTGTTTTGCTT------AGATTTCTGATAGTCATGGAA---AAGAAGACCTGTTGCCTAAAAACCACTTGATGCAAGATGAAATTGCCAGGCTTAGGCTGGAAATAGAGACAATTAAAAATCAAAACC------TGGAAAAGAAATATTTAAAAGACATTGAAATTA----TAAAAGGGAGGAATGAAGACCTTCAAAAGGCTCTAAAATGGAATGGGGAAACATTAACAAAAATGATCGCCCGTTCTAGTGGACGGCTTACTGCTCTGACAGATGAGAACACAATGCTCCGTTCCAAACTGGAGCAGGAAAAGGAAAGCAACCGAAGACTGGAAACAGAAATTGAATCATACCGTTGTAGACTGAATGCTGTTCTACGTGATCATGATCAAAGTCAGTCATCAGAAAGAGACCAAGAGCTTGCTTTCCAGCGCACAGTAGATAAATGGTGTCATTTACAGGAAAATTTGAATTCTCATGT-TCT--------------------GATTCTTT--CTCAGCAACTTTCTAAAG-CTGAGAGTAAGTCCAGTGGCCTCGAAACTGAGCTGTGTTACACAAGAGAGGCTCTGAAAGAAAAGACTTTGGTTTTTGAATGCATGCAAAGAGACCTAAACCAAACACAGTGTCAAATGAAGGACATTGAAAAAATGTATAAAAATGGCCAAGATAAAGTAGAAAAATGCATAGAAAAGCAGGAA------------AGATTATGTCAACTACATAGACAAAGTATGTTGCTTCAACAGCAACTGAATGATGCTCACAACAAAGCTGACAATCAAGAAAAAATATTAATTAATATTCAAGCCAAATGTGATGCTAGAGTACAAAATGTTCAAGCTGAGTGCAGAAAGTGCTCTATTTTGCTAGAAGAAGAGAATAAGAGGTTGATCAGTGAAGTTAATCATCTGAAAGAAAAACAATGTCAGTATGAAAGAGAGAGAGCAGAAAGAGAAGTGAGTATCAAGAAAAATAAGTATTTTTCAAACTTCCTGAAGTAAAATTTAAAGTAATGTTTGGTTACAGCTAAATGTTGAATCTAGTTGAATATAAAAAAGGATACATAGGATAAATATATCTGCTATACCAGCTTAGAAACATTCCTTGTCTCCAGCAAATCAAACTTAGAACTGAGAGATGCTTTCCTCTGATTAAAGTCAATGTGTCACTTATGAAATTTT----------GTTAT--------------TATAGACTAATAT---TAATGTAGTCTTATGCTGCTGAAATAATAATTTT-----AAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 94810 1977 - 3620821 GTCATGATTTTCTAAGAGGAGCTCAATAAATTTAATTTTCTTGACTTTTGGTGTTTGGAAATAAAAGACTATTTTTG------------------------------------------TATGTGTGTATCTACCTAACAGAAGTAAC--TGATTTGGTGGAAGAGCACTTGAAGTAGAATCAGAAAACCTGGGAA-AAA-TCCTGCAGCTTGCTTATATTTTTAAACTTTCACTGT-AGCATTATA--actaaatgagttcattgatttgtgcatgtagaagtgctta----gcacaatgcctagatatatc---------atttatcagtaaatgtCATTCTTAAAACTGACCACAACAATAT---TAGAAAAGTAGAATATCTATACAGTATT-TTaggaaaaaggaacttaaagaatttggaaaatttcattcatctgtccaaatatctgccaagctaaCGCTCTTACTCTAGGGGGAAGCATAGATTAGGTGTTAGAATGCAAACTCAGTTTTATAATACAGTCGCAGTTATTACTCCTTTATGCCTCGTGGTTTGTTGTAATTCAGTAAAAGCCTTTTTTAAATTCTGAGATTTAAAAAAATTATTTAGTGG----TTTCT-----TAAAAGCCTTCATGGATTCACTGTCTTCAAAT----TTTTAAACTTTGTGGAATTCAAACCTCTATGAGG-TTTGAGGTTTTGACTCAACTTTTTTTTTCC-AGTTAGATATCCAGTTATGGCAACCCTCTCATTGTATAAATGTACAGGTTATTATTTAATTTCAGAAGCAATCGTAATATGTTATCCTATTGGGTACTAGTT--AAGTTTTCTTTGTTTTGCTT------AGATTTCTGATAGTCATGGAAAAGAAGAAGACCTGTTGCATAAAAACCACTTGATGCAAGATGAAATTGCCAGGCTTAGGCTGGAAGTAGACACAATTAAAAATCAAAACC------TGGAAAAGAAATACTTAAAAGACATTGAAATTA----TAAAAGGGAGGAATGAAGACCTTCAAAAGACTCTAAAATGGAATGGGGAAACATTAACAAAAATGATAGCCCGTTCTAGTGGACGGCTTACTGCTCTGACAGATGAGAACACAATGCTCCGTTCCAAACTGGAGAAGGAAAAGGAAAGCAACCAAAGACTGGAAACAGAAATTGAATCATACCGTTGTAGACTGAATGCTGTTCTACGTGATCATGATCAAAATCAGTCATCAGAAAGAGACCAAGAGCTTGCTTTCCAGGGCACAGTAGATAAATGGTGTCATTTACAGGAAAATTTGAATTCTCATGT-TCT--------------------GATTCTTT--CTCAGCAACTTGCTAAAG-CTGAGAGTAAGTCCAGTGGCCTCGAAACTGAGCTCTGTTACACAAGAGAGGCTCTGAAAGAAAAGACTTTGGTTTTTGAATGCATGCAAAGAGACCTAAACCAAACACAGTGTCAAATGAAGGACATTGAAAAAATGTACAAAAATGGCCAAGATAAAGTAGAAAAATGCATAGAAAAGCAGGAA------------AGATTATGTCAGCTACATAGACAAAGTATGCTGCTTCAACAGCAACTGAATGATGCTCACAACAAAGCTGACAATCAAGAAAAAACATTAATTAATATTCAAGCCAAATGTGATGCTAGAGTACAAAATGTTCAAGCTGAGTGCAGAAAGCGCTCTATTTTGCTAGAAGAAGAGAATAAGAGGTTGATCAATGAAGTTAATCATTTGAAAGAAAAACAATGTCAGTATGAAAGAGACAAAGCAGAAAGAGAAGTGAGTATCAAGAAAAATAAGTATTTTTCAAACTTCCTGAAGTAAAAGTTAAAGTAATATTTGGTTAGAGCTAAATGTTGAATCTAGTTGAATATAAAAAAGGATACATATGATAAATATATCTGCTATATCAGCTTAGAAACATTGCTTGTTTCCAGCAAATCAAAGTTAGAACTGAGAGATACTTTCCTCTGATTAAAGTCAATTTGTCACTTATGAAATTTT--------AAGTTAT--------------TATAGACTAATAT---TAATGTAGTCTTATGCTGCTGAAATAATAATTTT-----AAT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19671248 2037 - 27850971 CTTACGATTTTCTAAGAAGAGCTCTCTAAATTTTATCTTATTTACCAGTAGTGTTTTGAAATAAAAGGCTTCTTTTGTATTTacacacacacacacacacacacacacacacatatacaTATATATATATTTACAGCAGAAAAGTAACTATGATTTGGCGTGAGAGT--------TAGAATCAGAAGACTTGGGGGTAAA-TCCTAGAGAATGCTTTTATTTTCAACCTCTTCTTTTCAAAATTGTGCTGTTGCATAAGTTCATTGA-----GTATATGGAAATTCTTA----GTACAATGCC-AGATTTATCaataaatataattttcaataaatataattcttataattGACTATAAAAATGTTAGTAGAAAAGTAGAATGTCTATAGAATATTCTCAGGAAAAAGGAACTTAGATCTTAGGGAAATTTTCAT--------CAGAATATAAGCAGAATTAAAGCATTTACTGTACAGTAGTATGTAGGTTAAATAGCAGAATGTAAACTAAATTTTTTAATGTAGTCAAAGTTATTAATCTTTTATACCTTTGGTTTTGTTGTAATTCAGAGAATGGAATTTTC-AATTCTGAGATTCTTAAAAATTCTATAGTGG--------------T--------------------TGTCTTCAAATAAATTTTTGAACTCCAGGGAATTTATG-CTGTATAAGGTTTTGATGTTTTAATTCAATGGTTTTTCTGT---TTGGATATCCACTTATTGCAACAC-----TTGTATTAATATACAGGTTATTCTTTAATTACAGAGGAAATTATGATATGCCATTTTACTGAGTGCTAGCTAAAAGTTTCCTCTGATTTCTTT------AGACTTCTTATGGCCATGAAAAAGAAGACGACCCATTGCATAAAAATCACATGTTGCAGGATGAAATTGCCATGCTAAGACTGGAAATAGACACGATAAAAATTCAGAACCAGGAAAAGGAAAAGAAATATTTTGAGGACATTGAAATTG----TGAAAGAAAAGAATGATGACCTTCAAAGGACTATAAAACTGAATGAGGAAACATTAACAAAAACAATATCCCAGCATAATGGACAGCTCAGTGTTCTGACAGCTGAGAATACAATGCTAAATTCTAAATTGGAGAATGAAAAACAGATTAAGGAAAGACTGGAAGCAGAAGTTGAATCATACCGCTCTAGACTGGCTGCTGCTGTACATGATTGTGATCAAAGTCAGACATCAAAAAGAGACCTAGAACTTGCCTTCCAGAGAGCAAGAGATGAGTGGTTTCGATTACAAGACAGAATGAATTTTGATTTGTCTAACCTAAAAGATAACAATGAGATTCTTT--CTCAACAACTTTCTAAGA-CTGAAAGCAAATTCAATAGCCTAGAAATTGATCTCCATCACACAAGAGATGCTCTCAGAGAAAAGACTTTGGTTTTAGAACGTGTACAAAGAGACCTTAGCCAAACCCAGAGTCAAATGAAGGAAATTGAACAGATGTATCAAGAAGAACAAGGTAAAGTGAATAAATACATTGGAAAACAGGAATCTGTAGAGGAGAGATTATCTCAACTACAAAGTGAAAATATGTTGCTTCGACAGCAACTGGATGATGCTCAGAACAAAGCTGATAGTAAAGAAAAGACAGTAATTAATATCCAGGACCAATTTCATGCTATAGTGGAAAAACTTCAAGCTGAAAGTGAAAAGCAAAGTATTCTGCTAGAAGAAAGAAATAAAGAATTAATCAGTGAATGCAATCATTTAAAAGAAAGACAGTATCAATACGAAAATGAGAAAGCAGAAAGAGAAGTAAGTATCAAGGAAGAGAAATAGTTTTCAAACTTCCTGAAAGAAAA----AA--------TGGTTATGAATAAATGTTGAGTC-AGTGGAATATAAAAAT--AAATAGATGATAAATGTATCTACTGTATCAGCTTAGAAACATACCTTGTTTCCACCAAATGAAAGTTAGGGCTGAGAGTTGCTTTACTTTGGGTAAAAACATTGTGTCACCTATGAAATTTTGAGAGGTTAAATTACAAATTGTGAAGAGCTGTAGACTAATCTTAACAAT-TAGTCTTAGACTGCTGAAATAACATATTT-----AGT i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=18224.000000 s hg38.chrUn_KI270746v1 36694 14 + 66486 GTATTTATGTTGCA s panPan2.chr2A 89845413 14 + 114371477 GTATTTATGTTGCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 861548 14 - 998796 GTATTTATGTTGCA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47857741 14 + 94967081 GTATTTATGTTGCA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108559683 11 + 108979918 -TTTTCATTTCA-- i rheMac8.chr13 C 0 I 2 s macFas5.chr13 17696448 9 + 111193037 ---TTCATTTCA-- i macFas5.chr13 C 0 I 2 s cerAty1.NW_012001187v1 5051477 9 - 5626091 ---TTCATTTCA-- i cerAty1.NW_012001187v1 C 0 I 2 s chlSab2.chr14 16530735 9 + 107702431 ---TTCATTTCA-- i chlSab2.chr14 C 0 I 2 s manLeu1.NW_012101154v1 338116 9 - 409142 ---TTCATTTCA-- i manLeu1.NW_012101154v1 C 0 I 2 s calJac3.chr14 14836593 14 + 108792865 GTATTTATGTTGCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27275386 13 - 28799539 GTA-TTATGTTGCC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 96787 14 - 3620821 GTGTTTATGTTGCC i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19673285 14 - 27850971 GTCTTTATGTTGGC i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e macNem1.NW_012014799v1 10562119 6 - 11597128 I a score=99303.000000 s hg38.chrUn_KI270746v1 36708 13 + 66486 ACATTTTAAGACC s panPan2.chr2A 89845427 13 + 114371477 ACATTTTAAGACC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 861562 13 - 998796 ACATTTTAAGACC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47857755 13 + 94967081 ACATTTTAAGACC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108559696 13 + 108979918 ACATTTCAAGACC i rheMac8.chr13 I 2 C 0 s macFas5.chr13 17696459 13 + 111193037 ACATTTCAAGACC i macFas5.chr13 I 2 C 0 s macNem1.NW_012014799v1 10562125 13 - 11597128 ACATTTCCAGACC i macNem1.NW_012014799v1 I 6 C 0 s cerAty1.NW_012001187v1 5051488 13 - 5626091 ACATTTCAAGACC i cerAty1.NW_012001187v1 I 2 C 0 s chlSab2.chr14 16530746 13 + 107702431 ACATTTCAAGACC i chlSab2.chr14 I 2 C 0 s manLeu1.NW_012101154v1 338127 13 - 409142 ACATTTCAAGACC i manLeu1.NW_012101154v1 I 2 C 0 s calJac3.chr14 14836607 13 + 108792865 ACATTTTAAGACC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27275399 13 - 28799539 ACATTTTAAGACC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 96801 13 - 3620821 ACACTTTAAGGCC i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19673299 13 - 27850971 ACATTTCAAGACC i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=1311528.000000 s hg38.chrUn_KI270746v1 36721 212 + 66486 ATGATAAATCAGATATATGGAAATGCTCATACCTAAAATG-GTATTTTGAAGTT--GATTCAATAAATTGGGGTACTTTGACAGTTAATTTCAGATTTCCTAGATGAGCTGAAGTGTATTCCCTATTTCATAATTACTTTTCTTCAGTAGCTTTAAATATGTCTTAGTAGGTAAAATTTTGTTCTTCTTCATGTCAGTTTGA---------------------CTTAAATCTGAAA s panPan2.chr2A 89845440 212 + 114371477 ATGATAAATCAGATATATGGAAATGCTCATACCTAAAATG-GTATTTTGAAATT--GATTCAATTAAGTGGGGTACTTTGACAGTTAATTTCAGATTTCCTAGATGAACTGAAGTGTATTCCCTATTTCATAATTACTTTTCTTCAGTAGCTTGAAATATGTCTTAGTTGGTAAAATTTTGTTTTTCTTCATGTCAATTTGA---------------------CTTAAATCTGAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 861575 211 - 998796 ATGATAAATCAGATATATGGAAATGCTCATACCTAAAATG-GTATTTTGAAATT--GATTCAATTAAGTGGGGTA-TTTGACAGTTAATTTCAGATTTCCTAGATGAACTGAAGTGTATTCCCTATTTCATAATTACTTTTCTTCAGTAGCTTGAAATATGTCTTAGTTGGTAAAATTTTGTTTTTCTTCATGTCAATTTGA---------------------CTTAAATCTGAAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47857768 212 + 94967081 ATGATAAATCAGATATATGGAAATGCTCATACCTAAAATG-GTATTTTGAAATT--GATTCAATTAAGTGGGGTACTTTGACAGTTAATTCCAGATTTCCTAGATGAACTGAAGTGTATTCCCTATTTCATAATTACTTTTCTCCAGTAGCTTTAAATGTATCTTAGTTGGTAAAATTTTGTTTTTCCTCATGTCAGTTTGA---------------------CTTAAATCTGAAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108559709 212 + 108979918 ATGATAAATCAGATATATGGAAATGCTCATACCTAAAATG-GTATTTTGAAATT--GATTCAATTAAGTGGGGTACTTCGACAGTTAATTTCAGATTCCCCAGATGAACTGAAGTGTATTCCTTATTTCATAATTATTTTTCTTCAGTAGCTTTAAATATATCTTAGTTGGTACAATTTTGTTTTTCTTCATATCAATTTGA---------------------CTTAAATCTGAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17696472 212 + 111193037 ATGATAAATCAGATATATGGAAATGCTCATACCTAAAATG-GTATTTTGAAATT--GATTCAATTAAGTGGGGTACTTCGACAGTTAATTTCAGATTTCCCAGATGAACTGAAGTGTATTCCTTATTTCATAATTATTTTTCTTCAGTAGCTTTAAATATATCTTAGTTGGTACAATTTTGTTTTTCTTCATATCAATTTGA---------------------CTTAAATCTGAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10562138 212 - 11597128 ATGATAAATCAGATATATGGAAATGCTCATACCTAAAATG-GTATTTTGAAATT--GATTCAATTAAGTGGGGTACTTCGACAGTTAATTTCAGATTTCCCAGATGAACTGAAGTGTATTCCTTATTTCATAATTATTTTTCTTCAGTAGCTTTAAATATATCTTAGTTGGTACAATTTTGTTTTTCTTCATATCAATTTGA---------------------CTTAAATCTGAAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5051501 212 - 5626091 ATGATAAATCAGATATATGGAAATGCTCATACCTAAAATG-GTATTTTGAAATT--GATTCAATTAAGTGGGGTACTTCCACAGTTAATTTCAGATTTCCCAGATGAACTGAAGTGTATTCCCTATTTCATAATTATTTTTCTTCAGTAGCTTTAAATATATCTTAGTTGGTACAATTTTGTTTTTCTTCATATCAATTTGA---------------------CTTAAATCTGAAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16530759 212 + 107702431 ATGATAAATCAGATATATGGAAATGCTCATACCTAAAATG-GTATTTTGAAATT--GATTCAATTAAATGGGGTACTTTGACAGTTAATTACAGATTTCCCAGATGAACTGAAGTGTATTCCTTATTTCATAATTATTTTTCTTCAGTAGCTTTAAATATATCTTAGTTGGTACAATTTTGTTTTCCTTCATATCAATTTGA---------------------CTTAAATCTGAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 338140 212 - 409142 ATGATAAATCAGATATATGGAAATGCTCATACCTAAAATG-GTATTTTGAAATT--GATTCAATTAAGTGGGGTACTTCGACAGTTAATTTCAGATTTCCCAGATGAACTGAAGTGTATTCCCTATTTCATAATTATTTTTCTTCAGTAGCTTTAAATATATCTTAGTTGGTACAATTTTGTTTTTCTTCATATCAATTTGA---------------------CTTAAATCTGAAA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14836620 233 + 108792865 ATGATAAATCAGATATATGGAAATGCATATACTTAAAATA-GTATTTTGAAATT--GATTCAATTAAGTGGGGTACTTTGACAGTTAATATCAGATTTTCCAGATGAAGTGAAGTGTATTCCCTGTGTCATAATTATTTTTCTTCAGTAGCTTTAAAAATATCTTAGTTGTTACAGTTTTGTTTTTCTTCATGTCAATTTGACTTAAATCTGAGACCATTTGTCTTAAATCTGAAA i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107537v1 96814 233 - 3620821 ATGATAAATGAGATATATGGAAATGCATATACCTAAAATG-GTGTTTTGAAATT--GATTCAATTAAGTGGGGTACTTTGACAGTTAAAATCAGATTTTCCAGATGAACTGAAGTGTACTCCCTGTGTCATAATTATTTTTCTTCAGTAGCTTTAAATATATCTTAGTTGGTACAGTTTTGTTTTTCTTCATGTCAATTTGActtaaatctgaaactatttgtcttaaatctgaaa i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19673312 210 - 27850971 ATGATGAAGCAGATAAACAGAAGTGCTCGTACCTGAAATGAGTATTTTGAAATTCAGATTCAATTAAATGGGTTACTTTGATGGTTAATTTGAGATTTCCCAGA-----TGAAGTCTATTGCTGGATCCTGTGATACTTTCCTTCAGTAACTTTTTATATATTTTAGTTGGTATTATTTTACTTTTATTCATGTTAATTTGA---------------------CTTAAATCTGAAA i otoGar3.GL873538 C 0 I 101 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e saiBol1.JH378124 27275412 0 - 28799539 C a score=36192.000000 s hg38.chrUn_KI270746v1 36933 5 + 66486 CTATT s panPan2.chr2A 89845652 5 + 114371477 CTATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 861786 5 - 998796 CTATT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47857980 5 + 94967081 CTATT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108559921 5 + 108979918 CTATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17696684 5 + 111193037 CTATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10562350 5 - 11597128 CTATT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5051713 5 - 5626091 CTATT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16530971 5 + 107702431 CTATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 338352 5 - 409142 CTATT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14836853 5 + 108792865 CTATT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107537v1 97047 5 - 3620821 ctatt i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19673623 5 - 27850971 ctatt i otoGar3.GL873538 I 101 I 122 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e saiBol1.JH378124 27275412 0 - 28799539 C a score=149700.000000 s hg38.chrUn_KI270746v1 36938 23 + 66486 TCAATCTCAAGTTATGTATAGAT s panPan2.chr2A 89845657 23 + 114371477 TCAATCTCAAATTATGTATAGAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 861791 23 - 998796 TCAATCTCAAATTATGTATAGAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47857985 23 + 94967081 TCAATCTCAAATTATGTATAGAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108559926 23 + 108979918 TCAATCTCAAATTATGTATAGAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17696689 23 + 111193037 TCAATCTCAAATTATGTATAGAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10562355 23 - 11597128 TCAATCTCAAATTATGTATAGAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5051718 23 - 5626091 TCAATCTCAAATTATGTATAGAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16530976 23 + 107702431 TCAATCTCAAATTATGTATAGAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 338357 23 - 409142 TCAATCTCAAATTATGTATAGAT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14836858 23 + 108792865 TCAATCTCAAATTATAAATAGAT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107537v1 97052 23 - 3620821 tcaatctcaaatTATATATAGAT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19673750 23 - 27850971 TCAATCTCAATTTATGTATTTTT i otoGar3.GL873538 I 122 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e saiBol1.JH378124 27275412 0 - 28799539 C a score=721203.000000 s hg38.chrUn_KI270746v1 36961 109 + 66486 ATGATCATTCTATT-TTCAAAGGCATCTAATTTTAC-TTATA-----ATATGGGGAAAATGAAGTAAATTTTAGCCAAATCATATTTGATTTAATCTTCCCACTGGCATTTATAAT s panPan2.chr2A 89845680 115 + 114371477 ATGATCATTCTATTCTTTAAAGGCATCTAATTTTAC-TTATATTATAATATGGGGAAAATGCAGTAAATTTTAGCCAAATCATGTTTGATTTTATCTTCCCACTGGCATTTATAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 861814 115 - 998796 ATGATCATTCTATTCTTTAAAGGCATCTAATTTTAC-TTATATTATACTATGGGGAAAATGCAGTAAATTTTAGCCAAATCATGTTTGATTTTATCTTCCCACTGGCATTTATAAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47858008 110 + 94967081 ATGATCATTCTATTCTTTAAAGGCATCTAATTTTAC-TTATA-----ATATGGGGAAAATGCAGCAAATTTTAGCCAAATCATCTTTGATTTAATCTTCCCACTGGCATCTATAAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108559949 110 + 108979918 ATGATCATTCCTTTCTTTAAAGGCATCTAATTTTAC------TTATAATATGGGGAAAATGTGGTAAATTTTAGCCAAACCATATTTGATTTAATCTTCCCACTGGCATTTATGAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17696712 110 + 111193037 ATGATCATTCCATTCTTTAAAGGCATCTAATTTTAC------TTATAATATGGGGAAAATGTGGTAAATTTTAGCCAAACCATATTTGATTTAATCTTCCCACTGGCATTTATAAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10562378 115 - 11597128 ATGATCATTCCATTCTTTAAAGGCATCTAATTTTAT-TTATATTATAATATGGGGAAAATGTGGTAAATTTTAGCCAAACCATATTTGATTTAATCTTCCCACTGGCATTTATAAT i macNem1.NW_012014799v1 C 0 I 6638 s cerAty1.NW_012001187v1 5051741 115 - 5626091 ATGATCATTCCATTCTTTAAAGGCATCTAATTTTAC-TTATATTATAATATGGGGAAAACGTGGTAAATTTTAGCCAAACCATATTTGATTTAATCTTCCCACTGACATTTATAAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16530999 115 + 107702431 ATGATCATTCCATTCTTTAAAGGCATCTAATTTTAC-TTATATTATAATATGGGGAAAATGTGGTAAATTTTAGCCAAACCATATTTGATTTAATCTTCCCACTGGCATTTATAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 338380 115 - 409142 ATGATCATTCCATTCTTTAAAGGCATCTAATTTTAC-TTATATTATAATATGGGGAAAATGTGGTAAATTTTAGCCAAACCATATTTGATTTAATCTTCCCACTGACATTTATAAT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14836881 108 + 108792865 ATGATCATTCCACCCTTTAAAAGCATCTAACTTTAC------TTATAGTATGAGG-AAATGTGATAAATTTTAGCCAAACTGTATTTACTTTAATCTTCCTA-TGGCATTTATAAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27275412 110 - 28799539 ATGATCATTCCACTTTTTAAAGGCATCTGACTTTAC------TTATAGTATGAGGAAAATGTGGTAAATTTTAGCCAAACTGTATTTAATTTAATCTTCCTACTGGCATTTATAAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 97075 110 - 3620821 ATGATCATTCCACTTTTTAAAGGCATCTAACTTTAC------TTATAGTATGAGGAAAATGTGGTAAATTTTAGTCAAACTGTATTTAATTTAATCTTCCTACTTGCATTTATAAT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19673773 116 - 27850971 ATGACCTCTCAATTCTTTAAAGTGATCTACCTTTCTATTAAATCATAATTTGGAAATTAAGTGGTATATTTTAGCAAAATCATATTTGGTTTAATCCTCTCACTGGTACTTATGCT i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=50147.000000 s hg38.chrUn_KI270746v1 37070 9 + 66486 TTACTTTCA- s panPan2.chr2A 89845795 9 + 114371477 TTACTTTCA- i panPan2.chr2A C 0 I 1 s gorGor5.CYUI01015730v1 861929 9 - 998796 TTACTTTCA- i gorGor5.CYUI01015730v1 C 0 I 1 s nomLeu3.chr14 47858118 9 + 94967081 TTACTTTCA- i nomLeu3.chr14 C 0 I 1 s rheMac8.chr13 108560059 9 + 108979918 TTACTTTCA- i rheMac8.chr13 C 0 I 6202 s macFas5.chr13 17696822 9 + 111193037 TTACTTTCA- i macFas5.chr13 C 0 I 6205 s macNem1.NW_012014799v1 10569131 9 - 11597128 TTACTTTCA- i macNem1.NW_012014799v1 I 6638 I 1 s cerAty1.NW_012001187v1 5051856 9 - 5626091 TTACTTTCA- i cerAty1.NW_012001187v1 C 0 I 6544 s chlSab2.chr14 16531114 9 + 107702431 TTACTTTCA- i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 338495 9 - 409142 TTACTTTCA- i manLeu1.NW_012101154v1 C 0 I 5882 s calJac3.chr14 14836989 9 + 108792865 TTACTTTGT- i calJac3.chr14 C 0 I 2 s saiBol1.JH378124 27275522 9 - 28799539 TTACTTTGT- i saiBol1.JH378124 C 0 I 2 s cebCap1.NW_016107537v1 97185 9 - 3620821 TTACTTTGT- i cebCap1.NW_016107537v1 C 0 I 2 s otoGar3.GL873538 19673889 10 - 27850971 TTACCATGAA i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=704.000000 s hg38.chrUn_KI270746v1 37079 5 + 66486 --TTTTT s panPan2.chr2A 89845805 5 + 114371477 --TTTTT i panPan2.chr2A I 1 C 0 s gorGor5.CYUI01015730v1 861939 5 - 998796 --TTTTT i gorGor5.CYUI01015730v1 I 1 C 0 s nomLeu3.chr14 47858128 5 + 94967081 --TTTTT i nomLeu3.chr14 I 1 C 0 s rheMac8.chr13 108566270 4 + 108979918 --TTTT- i rheMac8.chr13 I 6202 I 1 s macFas5.chr13 17703036 4 + 111193037 --TTTT- i macFas5.chr13 I 6205 I 1 s macNem1.NW_012014799v1 10569141 4 - 11597128 --TTTT- i macNem1.NW_012014799v1 I 1 I 1 s cerAty1.NW_012001187v1 5058409 4 - 5626091 --TTTT- i cerAty1.NW_012001187v1 I 6544 I 1 s chlSab2.chr14 16531124 4 + 107702431 --TTTT- i chlSab2.chr14 I 1 I 1154 s manLeu1.NW_012101154v1 344386 4 - 409142 --TTTT- i manLeu1.NW_012101154v1 I 5882 I 1 s calJac3.chr14 14837000 3 + 108792865 --TTT-- i calJac3.chr14 I 2 I 2 s saiBol1.JH378124 27275533 3 - 28799539 --TTT-- i saiBol1.JH378124 I 2 I 2 s cebCap1.NW_016107537v1 97196 3 - 3620821 --TTT-- i cebCap1.NW_016107537v1 I 2 I 2 s otoGar3.GL873538 19673899 5 - 27850971 TCTTT-- i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=-9120.000000 s hg38.chrUn_KI270746v1 37084 4 + 66486 --AAAT s panPan2.chr2A 89845810 4 + 114371477 --AAAC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 861944 4 - 998796 --AAAC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47858133 4 + 94967081 --AAAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108566275 4 + 108979918 --AAAG i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17703041 4 + 111193037 --AAAG i macFas5.chr13 I 1 C 0 s macNem1.NW_012014799v1 10569146 4 - 11597128 --AAAG i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 5058414 4 - 5626091 --AAAG i cerAty1.NW_012001187v1 I 1 C 0 s manLeu1.NW_012101154v1 344391 4 - 409142 --AAAG i manLeu1.NW_012101154v1 I 1 C 0 s calJac3.chr14 14837005 2 + 108792865 --AT-- i calJac3.chr14 I 2 C 0 s saiBol1.JH378124 27275538 2 - 28799539 --AT-- i saiBol1.JH378124 I 2 C 0 s cebCap1.NW_016107537v1 97201 2 - 3620821 --AT-- i cebCap1.NW_016107537v1 I 2 C 0 s otoGar3.GL873538 19673904 4 - 27850971 TTAC-- i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e chlSab2.chr14 16531128 1154 + 107702431 I a score=1967379.000000 s hg38.chrUn_KI270746v1 37088 289 + 66486 AAAAAATTTGCTCCTAATTTTTATTTCAAGGCTCAATTACTATCATTTGGATATAACTTTGTCCAGGACAAA-AGAGGCATAGCTATCTGTGATTTATTAGTTTGACACTGCATCCCCATTTTCAGACTAAGGAGGATTTCAGACTAAcgaggagtggcaggactca----gagtaggaatggagtgagt-agggaggagagatatagcagctga-gtcagggtgggaggtggagggcaggttacttagagcatctaaggccactgtaattttacttttcttctgagatagacatc s panPan2.chr2A 89845814 295 + 114371477 AAAAAATTTGCTCATAATTTTTATTTCAAGGCTCAATTACTATCATTTGGATATAACTTTGTCCAGGACAAAGAGAGGCATAGCTATCTGTGATTTATTAGTTTGACACTGGATCCCCGTTTTCAGACTAAGGAGGATTTCAGACTAATGAGGAGTGGCAGGATTCACGCAGAGTAggaatggagtgagtcagggaggagagacacagcagctga-gttagggcgggaggtggagggcaggttacttagagcatctaaggccactggaattttacttttcttctgagatagacatc i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 861948 295 - 998796 AAAAAATTTGCTCATAATTTTTATTTCAAGGCTCAATTACTATCATTTGGATATAACTTTGTCCAGGACAAAGACAGGCATAGCTATCTGTGATTTATTAGTTTGACACTGGATCCCCGTTTTCAGACTAAGGAGGATTTCAGACTAATgaggagtggcaggattcacgcagagtaggaatggagtgagtcagggaggagagatacagtagctga-gtcagggcgggaggtggagggtaggtaacttagagcatctaaggccactggaattttacttttcttctgagatagacatc i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47858137 294 + 94967081 AAAAAATTTGCTCATAATTTTTATTTCAAGGCTCAATTACTATCATTTGGATATAACTTTGTCCAGGACAAAGAGAGGCATAGCTATCTGTGATTTATTAGTTTGACACTGGATCCCCATTTTCAGACTAAGGAGGATTTCAGACTAAcgaggagtggcaggattcatgtagagtaggaatggagtgagt-agggaggagaaatatagcagctga-gtcagggcaggaggtggagggcaggttacttagagcatctaaggccactggaattttacttttcttctgagatagacatc i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108566279 291 + 108979918 AAAAAATTTGCTCATAATTTTTATTTCAAGGCTCAGTTACTATCATTTGGATATAACTTTGTCCAGGACAAAGAGAGGCATAGCTATCTGTGATTTATTAGTTTG--ACTGGATCCCCATTTTCAGACTGAGGAGGATTTCAGACTGATGAGGAGTGTCAGGATTCACACAGAGTAggaatggagtgagt-agggaggagaga-gtagcagctga-gtcagggcaggaggtggagggcaggttacttagagcatctaaggccactggaattttactttttttctgagatagaaatc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17703045 291 + 111193037 AAAAAATTTGCTCATAATTTTTATTTCAAGGCTCAGTTACTATCATTTGGATATAACTTTGTCCAGGACAAAGAGAGGCATAACTATCTGTGATTTATTAGTTTG--ACTGGATCCCCATTTTCAGACTGAGGAGGATTTCAGACTGATGAGGAGTGTCAGGATTCACATAGAGTAggaatggagtgagt-agggaggagaga-gtagcagctga-gtcagggcaggaggtggagggcaggttacttagagcatctaaggccactggaattttactttttttctgagatagaaatc i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10569150 291 - 11597128 AAAAAATTTGCTCATAATTTTTATTTCAAGGCTCAGTTACTATCATTTGGATATAACTTTGTCCAGGACAAAGAGAGGCATAGCTATCTGTGATTTATTAGTTTG--ACTGGATCCCCATTTTCAGACTGAGGAGGATTTCAGACTGATGAGGAGTGTCAGGATTCACATAGAGTAggaatggagtgagt-agggaggagaga-gtagcagctga-gtcagggcaggaggtggagggcaggttacttagagcatctaaggccactggatttttactttttttctgagatagaaatc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5058418 293 - 5626091 AAAAAATTTGCTCATAATTTTTGTTTCAAGGCTCAATTACTATCATTTGGATATAACTTTGTCCAGGACAAAGAGAGGCATAGCTATCTGCGATTTATTAGTTTGACACTGGATCCCCATTTTCAGACTGAGGAGGATTTCAGACTGATGAGGAGTGTCAGGATTCACATAGAGTAggaatggagtgagt-agggaggaaaga-gtagcagctga-gtcagggcaggaggtggagggcaggttacttagagcatctaaggccactggaattttactttttttctgagatagaaatc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16532282 293 + 107702431 AAAAAATTTGCTCATAATTTTTATTTCAAGGCTCAATTACTATCATTTGGATATAACTTTGTCCAGGACAAAGAGAGGCATAGCTATCTGTGATTTATTAGATTGACACTGGATCCCCATTTTCAGGCTGAGGAGGATTTCAGACTGATGAGGAGTGTCAGAATTCACATAGAGTAggaatggagtgagt-agggaggagaga-gtagcagctga-gtcagggcaggaggtggagggcaggttacttagagcagctaaggccactggaattttactttttttctgagatagaaatc i chlSab2.chr14 I 1154 C 0 s manLeu1.NW_012101154v1 344395 293 - 409142 AAAAAATTTGCTCATAATTTTTATTTCAAGGCTCAATTACTATCATTTGGATATAACTTTGTCCAGGACAAAGAGAGGCATAGCTATCTGCGATTTATTAGTTTGACACTGGATCCCCATTTTCAGACTGAGGAGGATTTCAGACTGATGAAGAGTGTCAGGATTCACATAGAGTAggaatggagtgagt-agggaggaaaga-gtagcagctga-gtcagggcaggaggtggagggcgggttacttagagcatctaaggccactggaattttactttttttctgagatagaaatc i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14837007 283 + 108792865 GAAAAATTTGCTTATAATTTTTATGTCAAGGCTTAATTACTATTATTTGGATGTAATTTTGTCTAGGACAAAGAGAGGCAGAGCTATCTGTGATTTATTAGTTTGACATTGGATCCCAATTTTCAGACTAAGGAGGATTTCagactaat---gagtggcaggattcatgtagagtaggaatggagtagtc----------agacatagcagctgaggtcaggtcgggaggtggagggcaggttacttagatcatctaaggccattggaattttacttttgttctgcgatagaaatc i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27275540 286 - 28799539 GAAAAATTTGCTTATAATTTTTATGTCAAGGCTTAATTACTATCATTTGGATATAACTTTGTCTAGGACAAAGAGAGGCATAGCTGTCTGTGATTTATTAGTTTGACATTGTATCCCAATTTTCAGACTAAGGAGGATTTCAGACTAATgaggagtggcaggattcatgtagagtaggaatggagtagtc----------agacatagcagctgaggtcaggtcaggaggtggagggcaggttacttagatcatctaaggccattggaattttacttttgttctgcgatagaaatc i saiBol1.JH378124 C 0 I 1 s cebCap1.NW_016107537v1 97203 280 - 3620821 GAAAAATTTGCTTATAATTTTTATGTCAAGGCTTAATTACTATCATTTGGTTATAACTTTGTCTAGAACAAAGAGAGGCATAGCTATCTGTGATCTATTAGTTTGACATTGGACCCCAATTTTCAGACTAAGGAGAATTTCAGACTAATGAGGAGTGGCAGGATTCATGTAGAGTAGGAATGGAGTAGTC----------AGACATAGCAGCTGAGGTCAGGTTGGGAGGTGGAGGGCAGGTTGC------CATCTAAAGCCATTGGAATTTTACTTTTGTTCTGCAATAGAAATC i cebCap1.NW_016107537v1 C 0 I 16 s otoGar3.GL873538 19673908 257 - 27850971 AGATAATTTGCTGATAATT------TCAAGGCTCAATGACTACCATTTAGATACAACTTTGTCCAATACAAAGATAGTTGTAGCTATCTGTGATTTATTAGTTTGTCATCACATCTCCGTTTTCGGTCTAATGAG-----------------------CAGGATTCATgcatagtgggaatggagcaagt-aggggagagagttgtagcagctgaggccccggagggaggtggaagctaggtcacgtag---------ggccattagaattttgcttttattctgagataggactc i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=34644.000000 s hg38.chrUn_KI270746v1 37377 6 + 66486 ------------tattgg s panPan2.chr2A 89846109 6 + 114371477 ------------tattgg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 862243 6 - 998796 ------------tattgg i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47858431 6 + 94967081 ------------tattgg i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108566570 6 + 108979918 ------------tattgg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17703336 6 + 111193037 ------------tattgg i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10569441 6 - 11597128 ------------tattgg i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5058711 6 - 5626091 ------------tattgg i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16532575 6 + 107702431 ------------tattgg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 344688 6 - 409142 ------------tattgg i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14837290 6 + 108792865 ------------tattgg i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27275827 6 - 28799539 ------------tattgg i saiBol1.JH378124 I 1 C 0 s otoGar3.GL873538 19674165 18 - 27850971 ttaggactctgagatagg i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e cebCap1.NW_016107537v1 97483 16 - 3620821 I a score=251637.000000 s hg38.chrUn_KI270746v1 37383 35 + 66486 aagcatttaagcagatgattta--atgtgacGAACTC s panPan2.chr2A 89846115 35 + 114371477 aaggatttaagcagatgaTTTA--ATGTGAGGAACTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 862249 35 - 998796 aaggatttaagcagatgaTTTA--ATGTGAGGAACTC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47858437 35 + 94967081 aaggatttaagcagatgaTTTA--ATGTGAGGAACTC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108566576 35 + 108979918 aaggatttaagcaTATGATTTA--ATGTGAAGAACTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17703342 35 + 111193037 aaggatttaagcatatgaTTTA--ATGTGAAGAACTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10569447 35 - 11597128 aaggatttaagcatatgaTTTA--ATGTGAAGAACTC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5058717 35 - 5626091 aaggatttaagcagatgaTTTA--ATGTGAAGAACTC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16532581 35 + 107702431 aaggatttaagcatatgaTTTA--ATGTGAAGAACTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 344694 35 - 409142 aaggatttaagcagatgaTTTA--ATGTGAAGAACTC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14837296 35 + 108792865 aaggatttaagcagatgaTTTA--ATGTGAGGAACTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27275833 35 - 28799539 aaggatttaagcagatgaTTTA--ATGTGAGGAACTC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 97499 35 - 3620821 AAGGATTTAAGCAGATGATTTA--ACGTGAGGAAGTC i cebCap1.NW_016107537v1 I 16 C 0 s otoGar3.GL873538 19674183 37 - 27850971 actcatttgaGCATATGATTGACTATATGAAGAAGTC i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=192516.000000 s hg38.chrUn_KI270746v1 37418 29 + 66486 TGAGGTTGATTTGAGTTTCTAAT----AAAAA--G s panPan2.chr2A 89846150 28 + 114371477 TGAGGTTGATTTGAGTTTGTAAT----AAAAA--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 862284 28 - 998796 TGAGGTTGATTTGAGTTTGTAAT----AAAAA--- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47858472 29 + 94967081 TGAGGTTGATTTGAGTTTCTAAT----AAAAA--A i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108566611 29 + 108979918 TGAGGTTGATTTGAGTTTCTAAT----TAAAA--A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17703377 29 + 111193037 TGAGGTTGATTTGAGTTTCTAAT----TAAAA--A i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10569482 29 - 11597128 TGAGGTTGATTTGAGTTTCTAAT----TAAAA--A i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5058752 29 - 5626091 TGAGGTTGATTTGAGTTTCTAAT----TTAAA--A i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16532616 29 + 107702431 TGAGATTGATTTGAGTTTCTAAT----TAAAA--A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 344729 29 - 409142 TGAGGTTGATTTGAGTTTCTAAT----TAAAA--A i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14837331 31 + 108792865 TGAGGTTGATTTGAGTTTCTAAT----AAAAAACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27275868 35 - 28799539 TGAGGTTGATTTGAGTTTCTAATTAAAAAAAAAAA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 97534 31 - 3620821 TGAGGTTGATCTGAGTTTCTAAT----AAAAAAAA i cebCap1.NW_016107537v1 C 0 C 0 s eulMac1.LGHX01014546v1 8571 29 + 17505 TGAGGTTGATTTAAGCTTCTGAT----AAAAAG-- i eulMac1.LGHX01014546v1 N 0 N 0 s otoGar3.GL873538 19674220 26 - 27850971 TAATGTTGATTTGAGCTTCTAAT----AAA----- i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=4389761.000000 s hg38.chrUn_KI270746v1 37447 650 + 66486 AAAGAGGGAAATCATTCCACAATGTATAATTTAC---TACCATCGGTC---TCAACCACATACTCATTTCTTTTTGAGACTTCAG---GTTTTTAAGCATTGCAGATTCATCAGGGGAGGAATGACTAGTGGGCTGAATATGTTGTGTGAATAACA----ATACCAGTTTGGCAGGAAGATAACACCTTCTGTATCCTTAACTGGATTCAGTAATACACAGGAATGTGTACACATGAGGAAAAGAAGGTGAATCGATCTGTGTGGTGATATTTTTCAAAGTGTAT---GCTTTAGAGTTAAATATTATTAATGGTTTAATAATAAGGTGATTTGTAAAATCAGTAACAAAAATAAC-----ATCAGGTAGCTGTGAGACAGCTTCAATGAAAACAAGATGATGTCTTAAACAA----TCAGCAACAAAAGCTTTGCTGGATGCTTCATCGCGTCATTGCATCTATTTAGAAAATGAGATGCAGGATTCAAGGAAGAAATTAGACCAGATGAGAAGTCAAGT-------ATGTATGAAACTTTGCATGCCAACAACTGTTAATCTGT-------------------------------------------------AGCTAGTTAACTAATATAAAG-TG-TTTTGGGGTACTAATTTTAGTGGATGGCTTTCTTTTGTATTTTTATTA----------TAATT--AATTTTAT--------TAAAATT--TTATAGTGGATGGCTTTCTTTTGTA s panPan2.chr2A 89846178 607 + 114371477 AAAGAGGGAAATCATTCCACAATGTAGAATTTAC---CACCATCAGTC---TCACCCACATACTCATTTCTTTTTGAGACTTCAGAAGGTTTTTAAGCATTGCAGATTCATCAGGGGAGGAATGACTAGTGGGCTGAATATGCTATGTGAATAACA----ATACCAGTTTGGCAGGAAGATAACACCTTCTGTATCCTTAACTGGATTCAGTAATGAACAGGGATGTGTACACATGAGGAAAAGAAGGTGAATCTGTCTGTGTGGTGATATTTTTCAAAGTGTAT---GCCTTAGAGTTAAATATTATTAATGGTTTAATAATAAGGTGATTTGTAAAATCAGTAACAAAAATAAC-----ATCAGGTAGCTGTGAGACAGCTTTAACAAAAATGAGATGATGTCTTAAACAAACAATCAGCAACAAAATCTTTGCTGGATGCTTCATCGCGTCACTGCATCTATTTAGAAAATAAGATGCAGGATTCAAGGAAGAAATTAGACCAGATGAGAAGTCAAGA-------ATGTATGAAACTTTGCACACCAACAACTGTTAATCTGT-------------------------------------------------AGCTAGTTAACTAATATAAAG-TG-TTTTGGGGTACTAATTTTAGTGGATGGCTTTCTTTTGtatttt------------------------------------------------------------------------ i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 862312 657 - 998796 AAAGAGGGAAATCATTCCACAATGTAGAATTTAC---CACCATCAGTC---TCACCCACATACTCATTTCTTTTTGAGACTTCAGAAGGTTTTTAAGCATTGCAGATTCATCAGGGGAGGAATGACTAGTGGGCTGAATATGCTATGTGAATAACA----ATACCAGTTTGGCAGGAAGATAACACCTTCTGTATCCTTAACTGGATTCAGTAATGAACAGGGATGTGTACACATGAGGAAAAGAAGGTGAATCGGTCTGTGTGGTGATATTTTTCAAAGTGTAT---GCTTTAGAGTTAAATATTATTAATGGTTTAATAATAAGGTGATTTGTAAAATCAGTAACGAAATTAAC-----ATCAGGTAGCTGTGAGACAGCTTTAACAAAAATGAGATGATGTCTTAAACAAACAATCAGCAATAAAAGCTTTGCTGGATGCTTCATCGCGTCACTGCATCTGTTTAGAAAATGAGATGCAGGATTCAAGGAAGAAATTAGACCAGATGAGAAGTCAAGT-------ATGTATGAAACTTTGCACGCCAACAACTGTTAATCTGT-------------------------------------------------AGCTAGTTAACTAATATAAAG-TG-TTTTGGGGTACTAATTTTAGTGGATGGCTTTCTTTTGTATTTTTATTA----------TAATT--AATTTTAT--------TAAAATT--TTATGGTGGATGGCTTTCTTTTGTA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47858501 664 + 94967081 AAAGAGGGAAATCATTCCACAATGTGTAATTTCC---TACCATCAGTC---TCACCCACATACTCATTTCTTTTTGAGACTTCAGAAGGTTTTTAAGCATTGCAGATTGATC-GGGGAGGAATGACTAGTGGGCTGAATATGTTGTGTGAATAACA----ATACCAGTTTGGCAGGAAGATAACACCTTCTGTATCCTTAACTGGATTCAGTAATACACAGGGATGTGTACACATGAGGAAAAGAAGGTGAATCGGTCTGTGTGGTGATATTTTTCAAAGTGTAT---GCTTTAGAGTTAAATATTATTAATGGTTTAATAATAAGGTGATTTGTAAAATCAGTAACAAAAATAACATCTTATCAGGTAGCTGTGAGACAGCTTCAACAAAAACGAGATGATATCTTAAACAAACAATCAGCAACAGAAGCTTTGCTGGATGCTTCATCGCATCACTGCATCTATTTAGAAAATGAGATGCAGGATTCAAGGAAGAAATTAGGCCAGATGAGAACTCAAGTATGTATGATGTATGAAACTTTGCACGCCAACAACTGTTAATCTGT-------------------------------------------------AGCTAGTTAACTAGTATAAAG-TG-TTTTGGGGTACTAATTTTAGTGGATGGCTTTCTTTTGTATTTTTATTA--------------T--AATTTTAT--------TAAAATT--TTATAGTGGATGGCTTTCTTTTGTA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108566640 659 + 108979918 AAAGAGGGAAATCATTCCACAATGTATAAGTTAC---TACCATCAGTC---TCACCCACATACTCATTTCTTTTTGAGACTTCAGAAGGTTTTTAAGCATTGCAAATTCATCAGGGGAGGAATGACTAGTGGACTGAATATGTTGTGTGAATAACA----ATACCAATTTGGCAGGAAGATAACACCTTCTGTATCCTCAACTGGATTCAGTAATACACAGGAGTGAGTACACACGAGGAAAAGAAGGTGAATCGGTCTGTGTGGTGATATTTTTCAAAGTGTAT---ACTTCAGAGTTAAATATTATTAATGGTTTAATAATAAGATGATTTGTAAAATTAGTAACAAAAATAACATCTTATCAGGTAGTTGTGAGACAACTTCAGCAGAAACGAAATGATGTCTTAAACAAACAATCGTCAACAAAAGCTTTGCTGGATGCTTCATCGCGTCACTGCGTCCATTTAGAAAATGAGATGCAGGATTCAAGGAAGAAATTAGACCAGATAAGAAGTCAAGT-------ATGTATGAAACTTTGCACGCCAACAACTGTTAATCTGG-------------------------------------------------AGCTGGTTAACCAATATAAAG-TG---TCGGGGTACTAATTTTAGTGGATGGCTTTCTTTTGTATTTTTATTA----------TAATT--AATTTTAT--------TAAAATT--TTATAGTGCAT-GCTTTCTTTTGTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17703406 659 + 111193037 AAAGAGGGAAATCATTCCACAATGTATAAGTTAC---TACCATCAGTC---TCACCCACATACTCATTTCTTTTTGAGACTTCAGAAGGTTTTTAAGCATTGCAAATTCATCAGGGGAGGAATGACTAGTGGACTGAATATGTTGTGTGAATAACA----ATACCAATTTGGCAGGAAGATAACACCTTCTGTATCCTCAACTGGATTCAGTAATACACAGGAGTGAGTACACACGAGGAAAAGAAGGTGAATCGGTCTGTGTGGTGATATTTTTCAAAGTGTAT---ACTTCAGAGTTAAATATTATTAATGGTTTAATAATAAGATGATTTGTAAAATTAGTAACAAAAATAACATCTTATCAGGTAGTTGTGAGACAACTTCAGCAGAAACAAAATGATGTCTTAAACAAACAATCGTCAACAAAAGCTTTGCTGGATGCTTCATCGCGTCACTGCGTCCATTTAGAAAATGAGATGCAGGATTCAAGGAAGAAATTAGACCAGATAAGAAGTCAAGT-------ATGTATGAAACTTTGCACGCCAACAACTGTTAATCTGG-------------------------------------------------AGCTGGTTAACCAATATAAAG-TG---TCGGGGTACTAATTTTAGTGGATGGCTTTCTTTTGTATTTTTATTA----------TAATT--AATTTTAT--------TAAAATT--TTATAGTGCAT-GCTTTCTTTTGTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10569511 659 - 11597128 AAAGAGGGAAATCATTCCACAATGTATAAGTTAC---TACCATCAGTC---TCACCCACATACTCATTTCTTTTTGAGACTTCAGAAGGTTTTTAAGCATTGCAAATTCATCAGGGGAGGAATGACTAGTGGACTGAATATGTTGTGTGAATAACA----ATACCAATTTGGCAGGAAGATAACACCTTCTGTATCCTCAACTGGATTCAGTAATACACAGGAGTGAGTACACACGAGGAAAAGAAGGTGAATCGGTCTGTGTGGTGATATTTTTCAAAGTGTAT---ACTTCAGAGTTAAATATTATTAATGGTTTAATAATAAGATGATTTGTAAAATTAGTAACAAAAATAACATCTTATCAGGTAGTTGTGAGACAACTTCAGCAGAAACGAAATGATGTCTTAAACAAACAATCGTCAACAAAAGCTTTGCTGGATGCTTCATCGCGTCACTGCGTCCATTTAGAAAATGAGATGCAGGATTCAAGGAAGAAATTAGACCAGATAAGAAGTCAAGT-------ATGTATGAAACTTTGCACGCCAACAACTGTTAATCTGG-------------------------------------------------AGCTGGTTAACCAATATAAAG-TG---TCGGGGTACTAATTTTAGTGGATGGCTTTCTTTTGTATTTTTATTA----------TAATT--AATTTTAT--------TAAAATT--TTATAGTGCAT-GCTTTCTTTTGTA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5058781 656 - 5626091 AAAGAGGGAAATCATTCCACAATGTATAAGTTAC---TACCATCAGTC---TCACCCACATACTCATTTCTTTTTGAGACTTCAGAAGGTTTTTAAGCATTGCAAATTCATCAGGGGAGGAATGACTAGTGGACTGAATATGTTGTGTGAATAACA----ATACCAATTTGGCAGGAAGATAACACCTTCTGTATCCTCAACTGGATTCAGTAATACACAGGAATGAGTACACACGAGGAAAAGAAGGTGAATCGGTCTGTGTGGTGATATTTTTCAAAGTGTAT---ACTTCAGAGTTAAATATTATTAATGGCTTAATAATAAGATGATTTGTAAAATTAGTAACAAAAATAACATCTTATCAGGTAGTTGTGAGACAACTTCAGCAGAAACGAAATGATGTCTTAAACAAACAATCATCAACAAAAGCTTTGCTGGATGCTTCATCGCGTCACTGCGTCCATTTAGAAAATGAGATGCAGGATTCAAGGAAGAAATTAGACCGGAT---AAGTCAAGT-------ATGTATGAAACTTTGCACGCCAACAACTGTTAATCTGG-------------------------------------------------AGCTGGTTAACTAATATAAAG-TG---TCGGGGTACTAATTTTAGTGGATGGCTTTCTTTTGTATTTTTATTA----------TAATT--AATTTTAT--------TAAAATT--TTATAGTGCAT-GCTTTCTTTTGTA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16532645 660 + 107702431 AAAGAGGGAAATCATTCCACAATGTATAAGTTAC---TACCATCAGTC---TCACCCACATACTCATTTCTTTTTGAGACTTCAGAAGGTTTTTAAGCCTTGCAAATTCATCAGGGGAGGAATGACTAGTGGACTGAATATGTTGTGTGAATAACA----ACACCAATTTGGCAGGAAGATAACACCTTCTGTATCCTCAACTGGATTCAGTAATACACAGGAATGAGTACACACGAGGAAAAGAAGGTGAATCGGTCTGTGTGGTGATATTTTTCAAAGTGTAT---ACTTCAGAGTTAAATATTATTAATGGTTTAATAATAAGATGATTTGTAAAATTAGTAACAAAAATAACATCTTATCAGGTAGTTGTGAGACAACTTCAGCAGAAACGAAATGATGTCTTAAACAAACAATCATCAACAAAAGCTTTGCTGGATGCTTCATCGCGTCACTGCGTCCATTTAGAAAATGAGATCCAGGATTCAAGGAAGATATTAGACCAGATAAGAAGTCGAGT-------ATGTATGAAACTTTGCACGCCAACAACTGTTAATCTGG-------------------------------------------------GGCTGGTTAACTAATATAAAG-TG---TTGGGGTACTAATTTTAGTGGATGGCtttcttttgtatttttatta----------taatt--aattttat--------taaaatt--ttatagtgcatggctttcttttgta i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 344758 659 - 409142 AAAGAGGGAAATCATTCCACAATGTATAAGTTAC---TACCATCAGTC---TCACCCACATACTCATTTCTTTTTGAGACTTCAGAAGGTTTTTAAGCATTGCAAATTCATCAGGGGAGGAATGACTAGTGGACTGAATATGTTGTGTGAATAACA----ATACCAATTTGGCAGGAAGATAACACCTTCTGTATCCTCAACTGGATTCAGTAATACACAGGAATGAGTACATACGAGGAAAAGAAGGTGAATTGGTCTGTGTGGTGATATTTTTCAAAGTGTAT---ACTTCAGAGTTAAATATTATTAATGGTTTAATAATAAGATGATTTGTAAAATTAGTAACAAAAATAACATCTTATCAGGTAGTTCTGAGACAACTTCAGCAGAAACGAAATGATGTCTTAAACAAACAATCATCAACAAAAGCTTTGCTGGATGCTTCATCGCGTCACTGCGTCCCTTTAGAAAATGAGATGCAGGATTCAAGGAAGAAATTAGACCAGATAAGAAGTCAAGT-------ATGTATGAAACTTTGCACGCCAACAACTGTTAATCTGG-------------------------------------------------AGCTGGTTAACTAATATAAAG-TG---TCGGGGTACTAATTTTAGTGGATGGCTTTCTTTTGTATTTTTATTA----------TAATT--AATTTTAT--------TAAAATT--TTATAGTGCAT-GCTTTCTTTTGTA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14837362 653 + 108792865 AAAGAGGGAAACCATTCCACAATGTGTAATTTAC---TACCATCAGTC---TCACCCACATACTCATTTATTTTTGAGACTTCAGAAGGTTTTTAAGCATTACGACTTCATCAGGGGAGGAATGACTAGTGAGCTGAATATGTTGTGTCAGTAACA----ATACTAGTTTGATAGGAAGATAACACCTTCTGTACCCTTAATGGGATTCAGTAATAAACTGGAATGTGTACATATGAGGAAAAGAAGGTGAATCGGTCTGTGTGGTGATATTTTTCAAAGTGTAT---ACT------TTAAATATTATTAATGGTTCAATAA-AAGGTGATTTGTAAAACCAGTAACAAAAATAACATCTTATCAGGTACTTGTGAGACAACTTCAACAAAAACGGGTTGATGCCCTACACAAAGAATCAACATCAAAAACTTTGATGGATGCATCATTGCGTCGCTCCGTCCATTTAGAAAGTGAGCTGGAGGATTCAAAGAAGAAAGCAGGCCAGATGAGAAGTCAAGT-------ATGTATGAAACTTCACATGCCAAAAACAGTTAATCTGT-------------------------------------------------AGGTGGTTAACTAATATAAAG-TT---TTGGGGTACTAATTTTAGTGGCCGGCTTTCTTTTGTATTTTCATTC----------TAAGT--AATTTTAT--------CAAAATT--TTATAGTGAATGCTTTTCTTTTGTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27275903 708 - 28799539 AAAGGAGGAAATCATTCCATAGTGTGAAATTTAC---TACCATCAGTC---CCACCCACATACTCATTTCTTTTGGATACTTCAGAAGG-TTTTAAGCATTACAAATTCATCAGGGGAGG-ATGACTAGTGAGCTGAATATGTTCTGTGAATAACA----ATACTAGTTTGATAGGAAGATAACACTTTCTGTATCCTTAATGGGATTCAGTAATAAACAGGAATGTGTACATATGAGGAAAAGAAGGTGAATCAGTCTGTGTGGTGATATTTTTCAAAGTGTAT---ACTTTAGAGTTAAATATTATTAATGGTTCAATAATAAGGTGATTTGTAAAACCAGTAATAAAAATAACATCTTATCAGGTACTTGTGAGACAACTTCAGCAAAAACGGGATGATGCCCTACACAAAGAATCAACATCAAAAACTTTGGTGGATGCGTCATTGTGTCGCTCCATCCATTTAGAAAGTGAGCTGGAGGATTCAAAGAAGAAAGCAGGCCAGATGAGAAGTCAAGT-------ATGTATGAAACTTCACATGCCAACAACAGTTAATCTGTTTTTTAATAAACAAGAGAAAATAGATACATGTTGGCAAATGCTAACTAATGGTGGTTAACTAATATAAAGTTT---TTGGGGTACTAATTTTAGTGGCTGGCTTTCTTTTGTATTTTCATTC----------TAAGt--aattttat--------taaaatt--ttataGTGGATGCCTTTCTTTTGTA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 97565 669 - 3620821 AAAGAGGGAAATCATTCCACAATGTGTAATTTAC---TACCATCAGTC---CCACCTACATACTCATTTCTTTTTGATACTTCAGAAGG-TTTTAAGCATTACAAATTCATCAGGGGAGGAATGACTAGTGAGCTGAATATGTTGTGTGAGTAACA----ATACTAGTTTGATAGGAAGATAACACCTTCTGTATCCTT-ATGGGATTCAGTAATAAACAGGAATGTGTACATACGAGGAAAAGAAGGTGAATTGGTCTGTGTGGTGATATTTTTCAAAGTGTAT---ACTTTAGAGTTAAATATTATTAATGGTTCAATAATAAGGTGATTTGTAAAACCAGTAACAAAAATAACATCTTATCAGGTACTTATAAGACAACTTCAACAAAAACGGGATGATGCCCTACACAAAGAATCAACATCAAAAACTTTGGTGGATGCGTCATTGCGTCGCTCCATCCATTTAGAAAGTGAGCTGGAGGATTCAAAGAAGAAAGCAGGCCAGATGAGAAGTCAAGT-------ATGTATGAAGCTTCACATGCCAACAACAGTTAATCTGT-------------------------------------------------AGGTGGTTAACTAATATAAAGCTT---TTGGGGTACTAATTTTAGTGGCTGGCTTTCTTTTGTATTTTCATTCTAAGTAATTTTAAGT--AATTTTAT--------TAAAATT--TTATAGTGGATGCCTTTCTTTTGTA i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19674246 686 - 27850971 AAAGAGGGAAAACATTTTGTGTCATAGAATTTACCAACACCACCAGTCCCACCACCAGCATCCCTATTTCTTTTTGAGACTTTGGTAGATTGTTAAGCATTGCAAATTCATCAAGAGACAAATGAATAGTGGGCTGAATCTGTTGTCTAAATAATGGAATATATCAATTTGATAGGAAGATAATACCTTCTGTGTCCTTCACTGAAATGAGTTATAAACAGGAGTATGTGCACATGAGGAAAGGAAGGTAAATCGATGTATATAGTGCTGTTTTTGAATGTTTTTTGAATGTTAGATTTAAATATTATTGAC-ATTTGGTAATAAGGTGATTTATAAAATCTGTAACAAAAA-ATTATCTTATCAGGTAGTTGTGAGACAACTTCAACAAGAACTGGCTGATACCCTAAAAAAGCAGTCTATGTCAGAGGCTTCCCTGGAGGTTACATCACGTTACCGCATTAGTTTAGAAGATGAGACACAGGATTTAAAGAAGAAATTAGGTCAAATCAGAAGTCAAGT-------ATGTATGAAATTTAACATGTCCACAA---TTGATCTAT-------------------------------------------------AGCTGATGCAATAATATAAAG-TGCTTTTAGCATATTAATCATAATACACCACTTTATtttttattttcatta-------cttttattacaattttattatctttataatattaattataatacaccactttatttttta i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr16 15431663 13140 + 74645514 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=40110.000000 s hg38.chrUn_KI270746v1 38097 5 + 66486 TTTTC s panPan2.chr2A 89846785 1 + 114371477 ----c i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 862969 5 - 998796 TTTTC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859165 5 + 94967081 TTTTC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108567299 5 + 108979918 TTTTC i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17704065 5 + 111193037 TTTTC i macFas5.chr13 C 0 I 1 s macNem1.NW_012014799v1 10570170 5 - 11597128 TTTTC i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 5059437 5 - 5626091 TTTTC i cerAty1.NW_012001187v1 C 0 I 341 s papAnu3.chr13 104280138 5 + 128036923 ttttt i papAnu3.chr13 I 13140 C 0 s chlSab2.chr14 16533305 5 + 107702431 ttttc i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 345417 5 - 409142 TTTTC i manLeu1.NW_012101154v1 C 0 I 1 s calJac3.chr14 14838015 5 + 108792865 TTTTC i calJac3.chr14 C 0 I 1 s saiBol1.JH378124 27276611 5 - 28799539 TTTTC i saiBol1.JH378124 C 0 I 1 s cebCap1.NW_016107537v1 98234 5 - 3620821 TTTTC i cebCap1.NW_016107537v1 C 0 I 1 s otoGar3.GL873538 19674932 5 - 27850971 ttttc i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=-9867.000000 s hg38.chrUn_KI270746v1 38102 2 + 66486 CT s panPan2.chr2A 89846786 2 + 114371477 ct i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 862974 2 - 998796 CT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859170 1 + 94967081 C- i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108567305 1 + 108979918 T- i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17704071 1 + 111193037 T- i macFas5.chr13 I 1 C 0 s macNem1.NW_012014799v1 10570176 1 - 11597128 T- i macNem1.NW_012014799v1 I 1 C 0 s papAnu3.chr13 104280143 1 + 128036923 t- i papAnu3.chr13 C 0 I 159 s chlSab2.chr14 16533311 1 + 107702431 t- i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 345423 1 - 409142 T- i manLeu1.NW_012101154v1 I 1 C 0 s calJac3.chr14 14838021 1 + 108792865 t- i calJac3.chr14 I 1 C 0 s saiBol1.JH378124 27276617 1 - 28799539 t- i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 98240 1 - 3620821 T- i cebCap1.NW_016107537v1 I 1 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e otoGar3.GL873538 19674937 0 - 27850971 C e cerAty1.NW_012001187v1 5059442 341 - 5626091 I a score=47315.000000 s hg38.chrUn_KI270746v1 38104 9 + 66486 TATTATTAA s panPan2.chr2A 89846788 9 + 114371477 tattattaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 862976 9 - 998796 TATTATTAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859171 7 + 94967081 --TTATTAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108567306 9 + 108979918 TATTATTAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704072 9 + 111193037 TATTATTGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10570177 9 - 11597128 TATTATTAA i macNem1.NW_012014799v1 C 0 C 0 s chlSab2.chr14 16533312 9 + 107702431 tattattaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 345424 9 - 409142 TATTATTAA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838022 9 + 108792865 tattattaa i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276618 9 - 28799539 tattattaa i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98241 9 - 3620821 TATTATTAA i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19674937 5 - 27850971 -attac--- i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr13 104280144 159 + 128036923 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e cerAty1.NW_012001187v1 5059442 341 - 5626091 I a score=8281.000000 s hg38.chrUn_KI270746v1 38113 1 + 66486 T s panPan2.chr2A 89846797 1 + 114371477 t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 862985 1 - 998796 T i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859178 1 + 94967081 T i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108567315 1 + 108979918 T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704081 1 + 111193037 T i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10570186 1 - 11597128 T i macNem1.NW_012014799v1 C 0 C 0 s papAnu3.chr13 104280303 1 + 128036923 t i papAnu3.chr13 I 159 I 36 s chlSab2.chr14 16533321 1 + 107702431 t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 345433 1 - 409142 T i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838031 1 + 108792865 t i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276627 1 - 28799539 t i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98250 1 - 3620821 T i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19674942 1 - 27850971 t i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e cerAty1.NW_012001187v1 5059442 341 - 5626091 I a score=7098.000000 s hg38.chrUn_KI270746v1 38114 1 + 66486 T s panPan2.chr2A 89846798 1 + 114371477 t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 862986 1 - 998796 T i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859179 1 + 94967081 T i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108567316 1 + 108979918 T i rheMac8.chr13 C 0 I 338 s macFas5.chr13 17704082 1 + 111193037 T i macFas5.chr13 C 0 I 1 s macNem1.NW_012014799v1 10570187 1 - 11597128 T i macNem1.NW_012014799v1 C 0 I 338 s chlSab2.chr14 16533322 1 + 107702431 t i chlSab2.chr14 C 0 I 337 s manLeu1.NW_012101154v1 345434 1 - 409142 T i manLeu1.NW_012101154v1 C 0 I 372 s calJac3.chr14 14838032 1 + 108792865 t i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276628 1 - 28799539 t i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98251 1 - 3620821 T i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19674943 1 - 27850971 t i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr13 104280304 36 + 128036923 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e cerAty1.NW_012001187v1 5059442 341 - 5626091 I a score=19087.000000 s hg38.chrUn_KI270746v1 38115 9 + 66486 TTATTAAAA s panPan2.chr2A 89846799 9 + 114371477 ttattacaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 862987 9 - 998796 TTATTACAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859180 9 + 94967081 TTATTAAAA i nomLeu3.chr14 C 0 C 0 s macFas5.chr13 17704084 8 + 111193037 TTTTTAAA- i macFas5.chr13 I 1 C 0 s calJac3.chr14 14838033 9 + 108792865 ttattaaaa i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276629 9 - 28799539 ttattaaaa i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98252 9 - 3620821 TTATTAAAA i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19674944 9 - 27850971 ttattacag i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr13 104280304 36 + 128036923 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e manLeu1.NW_012101154v1 345435 372 - 409142 I e chlSab2.chr14 16533323 337 + 107702431 I e cerAty1.NW_012001187v1 5059442 341 - 5626091 I e macNem1.NW_012014799v1 10570188 338 - 11597128 I e rheMac8.chr13 108567317 338 + 108979918 I a score=-4075.000000 s hg38.chrUn_KI270746v1 38124 9 + 66486 TTTTA----------------------------------------------------------------TTAT s panPan2.chr2A 89846808 9 + 114371477 tttta----------------------------------------------------------------ttat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 862996 9 - 998796 TTTTA----------------------------------------------------------------TTAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859189 9 + 94967081 TTTTA----------------------------------------------------------------TTAT i nomLeu3.chr14 C 0 C 0 s macFas5.chr13 17704092 15 + 111193037 TGTTA-----------------------------TTATCT-----------------------------TTAT i macFas5.chr13 C 0 C 0 s papAnu3.chr13 104280340 73 + 128036923 tgttagccaggatggtctcgatctcctgacctggtgatccgcccgcctcggcctcctagagtgctgggattac i papAnu3.chr13 I 36 C 0 s calJac3.chr14 14838042 15 + 108792865 tttta-----------------------------ttatct-----------------------------ttat i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276638 15 - 28799539 tttta-----------------------------ttatct-----------------------------ttat i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98261 12 - 3620821 TT--------------------------------TTATCT-----------------------------TTAT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19674953 9 - 27850971 ttttg----------------------------------------------------------------ttat i otoGar3.GL873538 C 0 I 288 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e manLeu1.NW_012101154v1 345435 372 - 409142 I e chlSab2.chr14 16533323 337 + 107702431 I e cerAty1.NW_012001187v1 5059442 341 - 5626091 I e macNem1.NW_012014799v1 10570188 338 - 11597128 I e rheMac8.chr13 108567317 338 + 108979918 I a score=7092.000000 s hg38.chrUn_KI270746v1 38133 2 + 66486 AA s panPan2.chr2A 89846817 2 + 114371477 aa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863005 2 - 998796 AA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859198 2 + 94967081 AA i nomLeu3.chr14 C 0 C 0 s macFas5.chr13 17704107 2 + 111193037 AA i macFas5.chr13 C 0 C 0 s papAnu3.chr13 104280413 2 + 128036923 ag i papAnu3.chr13 C 0 I 146 s calJac3.chr14 14838057 2 + 108792865 aa i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276653 2 - 28799539 aa i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98273 2 - 3620821 AA i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19675250 2 - 27850971 AA i otoGar3.GL873538 I 288 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e manLeu1.NW_012101154v1 345435 372 - 409142 I e chlSab2.chr14 16533323 337 + 107702431 I e cerAty1.NW_012001187v1 5059442 341 - 5626091 I e macNem1.NW_012014799v1 10570188 338 - 11597128 I e rheMac8.chr13 108567317 338 + 108979918 I a score=127790.000000 s hg38.chrUn_KI270746v1 38135 24 + 66486 TGCACCTATATCTTAATCTCT----TTT s panPan2.chr2A 89846819 28 + 114371477 tGCACCTATATCTTAATCTCTGGCTTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863007 28 - 998796 TGCACCTATATCTTAATCTCTGGCTTTC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859200 28 + 94967081 CACACCTATATCTTAATCTCTGGCTTTC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108567655 27 + 108979918 TGCACCTGTATCTTAATCTCTGGCTTT- i rheMac8.chr13 I 338 I 1 s macFas5.chr13 17704109 24 + 111193037 TGCACCTGTATCttttttttt---ttt- i macFas5.chr13 C 0 I 318 s macNem1.NW_012014799v1 10570526 27 - 11597128 TGCACCTGTATCTTAATCTCTGGCTTT- i macNem1.NW_012014799v1 I 338 I 1 s cerAty1.NW_012001187v1 5059783 27 - 5626091 TGCACCTGTATCTTAATCTCTGGCTTT- i cerAty1.NW_012001187v1 I 341 I 1 s chlSab2.chr14 16533660 27 + 107702431 TGCACCTGTATCTTAATCTCTGGCTTT- i chlSab2.chr14 I 337 I 1 s calJac3.chr14 14838059 28 + 108792865 taCACCTATTTCTTAATCTCTGGCTTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276655 28 - 28799539 taCACCTATTTCTTAATCTCTGGCTTTC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98275 28 - 3620821 TACACCTATTTCTTAATCTCTGGCTTTC i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19675252 28 - 27850971 TGCACTTATTTCTTAAACTTTCACTTTC i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr13 104280415 146 + 128036923 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e manLeu1.NW_012101154v1 345435 372 - 409142 I a score=592571.000000 s hg38.chrUn_KI270746v1 38159 92 + 66486 ATTCTGCCATTTTTA--------ATACATA-T---TTTTTTCTTAAATATTTAACCTTAGGAAAGTTGAGAATTATGCATCATTTCTCACAGAAGTTGAGAGAG s panPan2.chr2A 89846847 94 + 114371477 ATTCTGCCATTTTTT--------GTACATA-TA-TTTTTTTCTTAAATATTTAACCTTAGGAAAGTTGAGAATTATGCATAATTTCTCACAGAAGTTGAGAGAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863035 94 - 998796 ATTCTGCCATTTTTT--------ATACACA-TA-TTTTTTTCTTAAATATTTAACCTTAGGAAAGTTGAGAATTATGCATCATTTCTCACAGAAGTTGAGAGAG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859228 94 + 94967081 ATTCTGCCATTTTTT--------ATACATA-TA-TTTTTTTCTTAAATATTTAACCTTAGGAAAGTTGACAGTTATGCATCCTTTCTCACAGAAGTTGAGAGAG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108567683 92 + 108979918 ATTCTGCCATTTTTT--------ATACATA----TTTTTTTCTTAAATATTTAACCTTAGGAAAGTTGAGAATTATGCATCATTTCTCACAGAAGTTCAGAGAG i rheMac8.chr13 I 1 I 1 s macFas5.chr13 17704451 92 + 111193037 ATTCTGCCATTTTTT--------ATACATA----TTTTTTTCTTAAATATTTAACCTTAGGAAAGTTGAGAATTATGCATCACTTCTCACAGAAGTTCAGAGAG i macFas5.chr13 I 318 I 1 s macNem1.NW_012014799v1 10570554 91 - 11597128 ATTCTGCCATTTTTT--------ATACAT-----TTTTTTTCTTAAATATTTAACCTTAGGAAAGTTGAGAATTATGCATCATTTCTCACAGAAGTTCAGAGAG i macNem1.NW_012014799v1 I 1 I 1 s cerAty1.NW_012001187v1 5059811 94 - 5626091 ATTCTGCCATTTTTT--------ATACATA-TT-TTTTTTTCTTAAATATTTAACCTTAGGAAAGTTGAGAATTATGCATCATTTCTCACAGAAGTTCAGAGAG i cerAty1.NW_012001187v1 I 1 I 1 s chlSab2.chr14 16533688 95 + 107702431 ATTCTGCCATTTTTT--------ATACATATTT-TTTTTTTCTTAAATATTTAACCTTAGGAAAGTTGAGAATTATGCATCATTTCTCACAGAAGTTCAGAGAG i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 345807 94 - 409142 ATTCTGCCATTTTTT--------ATACATA-TT-TTTTTTTCTTAAATATTTAACCTTAGGAAAGTTGAGAATTATGCATCATTTCTCACAGAAGTTCAGAGAG i manLeu1.NW_012101154v1 I 372 C 0 s calJac3.chr14 14838087 93 + 108792865 ATTCTGCCACTTTT---------ATACATA-TA-TTTTTTCCCTAAATATTTAACCTTAGGAAAGTTGAGAATTATGCATCCTTTCTCACATAAGTTCAGAGAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276683 94 - 28799539 ATTCTGCCATTTTT---------ATACATA-TATTTTTTTCCTTAAATATTTAACCTCAGGGAAGTTGAGAATTATGCATCATTTCTCACATAAATTCAGAGAG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98303 92 - 3620821 ATTCTGCCATTTTT---------ATACATA-TA-ATTTTTCCTTAAATATTTAACCTT-GGAAAGTTGAAAATTATGCATCCTTTCTCACATAAGTTCAGAGAG i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19675280 86 - 27850971 ATCCTGCCATTATTCTCTTATAGTTACATA----CTTTTTTTTATAATAACTG---TTAGGAAAGTTGAGAATTATATATTTTTTCTCAGAGA----------- i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11213977 3649 + 13868332 I e papAnu3.chr13 104280415 146 + 128036923 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=7284.000000 s hg38.chrUn_KI270746v1 38251 2 + 66486 TT s panPan2.chr2A 89846941 2 + 114371477 TT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863129 2 - 998796 TT i gorGor5.CYUI01015730v1 C 0 C 0 s ponAbe2.chr2a_random 11217626 2 + 13868332 TT i ponAbe2.chr2a_random I 3649 C 0 s nomLeu3.chr14 47859322 2 + 94967081 TT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108567776 1 + 108979918 -T i rheMac8.chr13 I 1 I 3 s macFas5.chr13 17704544 1 + 111193037 -T i macFas5.chr13 I 1 I 3 s macNem1.NW_012014799v1 10570646 1 - 11597128 -T i macNem1.NW_012014799v1 I 1 I 3 s cerAty1.NW_012001187v1 5059906 1 - 5626091 -T i cerAty1.NW_012001187v1 I 1 I 3 s papAnu3.chr13 104280561 1 + 128036923 -T i papAnu3.chr13 I 146 N 0 s chlSab2.chr14 16533783 2 + 107702431 GT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 345901 2 - 409142 TT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838180 2 + 108792865 GT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276777 2 - 28799539 GT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98395 2 - 3620821 GT i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e otoGar3.GL873538 19675366 0 - 27850971 C a score=4095.000000 s hg38.chrUn_KI270746v1 38253 1 + 66486 T s panPan2.chr2A 89846943 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863131 1 - 998796 T i gorGor5.CYUI01015730v1 C 0 C 0 s ponAbe2.chr2a_random 11217628 1 + 13868332 T i ponAbe2.chr2a_random C 0 I 1450 s nomLeu3.chr14 47859324 1 + 94967081 T i nomLeu3.chr14 C 0 I 1 s chlSab2.chr14 16533785 1 + 107702431 T i chlSab2.chr14 C 0 I 3 s manLeu1.NW_012101154v1 345903 1 - 409142 T i manLeu1.NW_012101154v1 C 0 I 3 s calJac3.chr14 14838182 1 + 108792865 T i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276779 1 - 28799539 T i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98397 1 - 3620821 t i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e otoGar3.GL873538 19675366 0 - 27850971 C e cerAty1.NW_012001187v1 5059907 3 - 5626091 I e macNem1.NW_012014799v1 10570647 3 - 11597128 I e rheMac8.chr13 108567777 3 + 108979918 I e macFas5.chr13 17704545 3 + 111193037 I a score=17159.000000 s hg38.chrUn_KI270746v1 38254 8 + 66486 -TTTTTTTT s panPan2.chr2A 89846944 5 + 114371477 -TTTTT--- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863132 4 - 998796 -TTTT---- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859326 5 + 94967081 -TTTTT--- i nomLeu3.chr14 I 1 C 0 s rheMac8.chr13 108567780 5 + 108979918 -TTTTT--- i rheMac8.chr13 I 3 C 0 s macFas5.chr13 17704548 5 + 111193037 -TTTTT--- i macFas5.chr13 I 3 C 0 s macNem1.NW_012014799v1 10570650 5 - 11597128 -TTTTC--- i macNem1.NW_012014799v1 I 3 C 0 s cerAty1.NW_012001187v1 5059910 5 - 5626091 -TTTTT--- i cerAty1.NW_012001187v1 I 3 C 0 s chlSab2.chr14 16533789 4 + 107702431 -TTTT---- i chlSab2.chr14 I 3 C 0 s manLeu1.NW_012101154v1 345907 5 - 409142 -TTTTT--- i manLeu1.NW_012101154v1 I 3 C 0 s calJac3.chr14 14838183 5 + 108792865 -TTTTT--- i calJac3.chr14 C 0 I 3 s saiBol1.JH378124 27276780 5 - 28799539 -TTTTT--- i saiBol1.JH378124 C 0 I 3 s cebCap1.NW_016107537v1 98398 5 - 3620821 -ttttt--- i cebCap1.NW_016107537v1 C 0 I 20 s otoGar3.GL873538 19675366 5 - 27850971 CTTTT---- i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=1135.000000 s hg38.chrUn_KI270746v1 38262 1 + 66486 T s rheMac8.chr13 108567785 1 + 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704553 1 + 111193037 C i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10570655 1 - 11597128 C i macNem1.NW_012014799v1 C 0 C 0 s manLeu1.NW_012101154v1 345912 1 - 409142 C i manLeu1.NW_012101154v1 C 0 C 0 s rhiBie1.NW_016839393v1 221 1 + 3426 C i rhiBie1.NW_016839393v1 N 0 I 1225 s calJac3.chr14 14838191 1 + 108792865 T i calJac3.chr14 I 3 C 0 s saiBol1.JH378124 27276788 1 - 28799539 T i saiBol1.JH378124 I 3 C 0 s cebCap1.NW_016107537v1 98423 1 - 3620821 t i cebCap1.NW_016107537v1 I 20 C 0 s otoGar3.GL873538 19675371 1 - 27850971 T i otoGar3.GL873538 C 0 C 0 e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e chlSab2.chr14 16533793 0 + 107702431 C e cerAty1.NW_012001187v1 5059915 0 - 5626091 C e panPan2.chr2A 89846949 0 + 114371477 C e nomLeu3.chr14 47859331 0 + 94967081 C e gorGor5.CYUI01015730v1 863136 0 - 998796 C a score=1038845.000000 s hg38.chrUn_KI270746v1 38263 146 + 66486 ACCTGTTAAACAGTCTATTTTTAATGATTTCTCTGTTGGCATGGTGAGGCAAGCCAGATTAATTCAGAGGACA-----------GTGTCTAATGGAATGTTTCAGAAAAT-TATCTTATTTTTAGTCTCTA--CTTTTCTGAACGTATAAAGAACTTGTG s panPan2.chr2A 89846949 145 + 114371477 -CCTGTTAAACAGTCTATTTTTAATGATTTCTCTATTGGCATGGTGAGGCAAGCCAGATTAATTCAGAAGATA-----------ATGTCTAATGGAATGTTTCAGAAAAT-TATCTTATTTTTAGTCTCTA--CTTTTCTGAATGTGTAAAGAACCTGTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863136 145 - 998796 -CCTGTTAAACAGTCTATTTTTAATGATTTCTCTATTGGCATGGTGAGGCAAGCCAGATTAATTCAGAGGATA-----------ATGTCTAATGGAATGTTTCAGAAAAT-TATCTTATTTTTAGTCTCTA--CTTTTCTGAATGTATAAAGACCCTGTG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859331 145 + 94967081 -CCTGTTAAACAGTCTATTTTTAATGATTTCTCTATTGGCATGGTGAGGCAAGCCAGATTAATTCAGAGGATA-----------ATGTCTAATGGAATGTTTCAGAAAAT-TATCTTATTTTTAGTCTCTA--CTTTTCTGAATGTATAAAGAATCTGTa i nomLeu3.chr14 C 0 I 57 s rheMac8.chr13 108567786 146 + 108979918 CCCTGTTAAACCGTCTGTTTTTAGTGATTTCTCTATTGGCATGGTGAGGCAAGCCAGATTAATTCAGAGGATA-----------ATGCCTAATGGAATGTTTCAGAAAAT-TATCTTATTTTTAATCTCTA--CTTTTCTGAATGAATAAAGAACCTGTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704554 146 + 111193037 CCCTGTTAAACCATCTGTTTTTAGTGATTTCTCTATTGGCATGGTGAGGCAAGCCAGATTAATTCAGAGGATA-----------ATGCCTAATGGAATGTTGCAGAAAAT-TATCTTATTTTTAATCTCTA--CTTTTCTGAATGAATAAAGAACCTGTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10570656 146 - 11597128 CCCTGTTAAACCGTCTGTTTTTAGTGATTTCTCTATTGGCATGGTGAGGCAAGCCAGATTAATTCAGAGGATA-----------ATGCCTAATGGAATGTTTCAGAAAAT-TATCTTATTTTTAATCTCTA--CTTTTCTGAATGAATAAAGAACCTGTG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5059915 146 - 5626091 CCCTGTTAAACAGTCTGTTTTTAGTGATTTCTCTATTGGCATGGTGAGGCAAGCCAGATTAATTCAGAGGATA-----------ATGTCTAATGGAATGTTTCAGATAAT-TATCTTATTTTTAATCTCTA--CTTTTCTGAATGAATAAAGAACCTGTG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16533793 146 + 107702431 CCCTGTTAAACAGTCTGTTTTTAGTGATTTCTCTATTGGCATGGTGAGGCAAGCCAGATTAATTCAGAGGATA-----------ATGTCTAATGGAATGTTTCAGAAAAT-TATCTTATTTTTAATCTCTA--CTTTTCTGAATGAATAAAGAACCTGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 345913 146 - 409142 CCCTGTTAAACAGTCTGTTTTTAGTGATTTCTCTATTGGCATGGTGAGGCAAGCCAGATTAATTCAGAGGATA-----------ATGTCTAATGGAATGTTTCAGAAAAT-TATCTTATTTTTAATCTCTA--CTTTTCTGAATGAATAAAGAACCTGTG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838192 146 + 108792865 TCCTGTTTAACAGTCTGTTTTTAGTGGTTTCTCTATTGCCATGATGAGAAAAGCCAGATTAATTCAGAGAATA-----------ATGTCTAATGGAATGTTTTAGAAAAT-TATCTTATTTATAATCTCTA--GTTTTCTGAATGAATAAAGAACCTGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276789 142 - 28799539 TCCTGTTCAACAGTCTGTTTTTAATGGTTTCTCTATTGCCATGATGAGAAAAGCCAG----ATTCAGAGGATA-----------ATGTCTAATGGAATGTTTCAGAAAAT-TATCTTATTTTTAATCTCTA--CTTTTCTGAATGAATAAAGAACCTGTG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98424 146 - 3620821 TCCTGTTAAACAGTCTGTTTTTAGTGGTGTCTCTGTTGCCATGATGAGAAAAGCCAGATTAATTCAGAGGATA-----------ATGTCTAATGAAATATTTCAGAAAAT-TATCTTATTTTTAATCTCTA--CTTTTCTGAATGAATAAAGAACCTGTG i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19675372 160 - 27850971 TCCTGTTAATCAGTAGTTTTTTAGTGATTTCTCTATTCCCATGATAAAGCAAACCAGATTAAATCAGAGGATAATATTTAATGGATATTTAATGGAATGTTCCAGAAAATGTTTTTTCTTTTTTTTTTTCAATCTTATGTGAATGGGTACAGAATCTGTG i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I a score=285977.000000 s hg38.chrUn_KI270746v1 38409 47 + 66486 TTTACTT-ATTTCATAGATTTCAGGTTAA-CTTGTTCAGAAAGGCCATT s panPan2.chr2A 89847094 47 + 114371477 TATACTT-ATTTCATAGATTTCAGGTTAA-CTTGTTCAGAAAGGCCATT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863281 47 - 998796 TATACTT-ATTTCATAGATTTCAGGTTAA-CTTGTTCAGAAAGGCCATT i gorGor5.CYUI01015730v1 C 0 C 0 s rheMac8.chr13 108567932 48 + 108979918 TATACTTAATTTCATAGATTTCAGGTTAA-CTTGTTCAGAAAGGCCATT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704700 48 + 111193037 TGTACTTAATTTCATAGATTTCAGGTTAA-CTTGTTCAGAAAGGCCATT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10570802 48 - 11597128 TATACTTAATTTCATAGATTTCAGGTTAA-CTTGTTCAGAAAGGCCATT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060061 47 - 5626091 TATACTT-ATTTCATAGATTTCAGGTTAA-CTTGTTCAGAAAGGCCATT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16533939 46 + 107702431 TATACTT-ATTTCATA-ATTTCAGGTTAA-CTTGTTCAGAAAGGCCATT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346059 47 - 409142 TATACTT-ATTTCATAGATTTCAGGTTAA-CTTGTTCAGAAAGGCCATT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838338 48 + 108792865 CATACTT-ATTTCATAGATTGCAGGTTAATTTTGTACAGAAAGGCCATT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276931 48 - 28799539 TATACTT-ATTTCATAGATTTCAGGTTAATTTTGTACAGAAAGGCCATT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98570 48 - 3620821 TATACTT-ATTTCATAGATTTCAGGTTAATTTTGTACAGAAAGGCCATT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19675532 47 - 27850971 TATATTT-ATTTCATGGATTTCAGGTTAA-CTTACGCAGAAAGGCCATT i otoGar3.GL873538 C 0 I 2106 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e nomLeu3.chr14 47859476 57 + 94967081 I a score=30690.000000 s hg38.chrUn_KI270746v1 38456 6 + 66486 TTACTG s panPan2.chr2A 89847141 6 + 114371477 TTACTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863328 6 - 998796 TTACTG i gorGor5.CYUI01015730v1 C 0 C 0 s rheMac8.chr13 108567980 6 + 108979918 CTACTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704748 6 + 111193037 CTACTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10570850 6 - 11597128 CTACTG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060108 6 - 5626091 CTACTA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16533985 6 + 107702431 CTACTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346106 6 - 409142 CTACTA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838386 6 + 108792865 CTACTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276979 6 - 28799539 CTACTA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98618 6 - 3620821 CTACTG i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e otoGar3.GL873538 19675579 2106 - 27850971 I e nomLeu3.chr14 47859476 57 + 94967081 I a score=21294.000000 s hg38.chrUn_KI270746v1 38462 3 + 66486 AAT s panPan2.chr2A 89847147 3 + 114371477 AAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863334 3 - 998796 AAT i gorGor5.CYUI01015730v1 C 0 C 0 s rheMac8.chr13 108567986 3 + 108979918 AAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704754 3 + 111193037 AAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10570856 3 - 11597128 AAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060114 3 - 5626091 AAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16533991 3 + 107702431 AAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346112 3 - 409142 AAT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838392 3 + 108792865 AAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276985 3 - 28799539 AAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98624 3 - 3620821 AAT i cebCap1.NW_016107537v1 C 0 C 0 s eulFla1.LGHW01011042v1 5106 3 - 25752 AAT i eulFla1.LGHW01011042v1 N 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e otoGar3.GL873538 19675579 2106 - 27850971 I e nomLeu3.chr14 47859476 57 + 94967081 I a score=122826.000000 s hg38.chrUn_KI270746v1 38465 21 + 66486 AAATTTTTATTTTGATGAAAA s panPan2.chr2A 89847150 21 + 114371477 AAATTTTTATTTCGATGAAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863337 21 - 998796 ACATTTTTATTTCGATGAAAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859533 21 + 94967081 ggattacaggcTTCATGAAAA i nomLeu3.chr14 I 57 C 0 s rheMac8.chr13 108567989 21 + 108979918 CAATTTTGATTTTGATGAAAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704757 21 + 111193037 CAATTTTGATTTTGATGAAAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10570859 21 - 11597128 CAATTTTGATTTTGATGAAAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060117 21 - 5626091 CAATTTTGATTTTGATGAAAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16533994 21 + 107702431 CAATTTTGATTTTGATGAAAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346115 21 - 409142 CAGTTTTGATTTTGATGAAAG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838395 21 + 108792865 AAATTTTTATTTTGATGAAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27276988 21 - 28799539 AAATTTTTATTGTGATGAAAA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98627 21 - 3620821 AAATTTTTATTTTGATGAAAA i cebCap1.NW_016107537v1 C 0 C 0 s eulFla1.LGHW01011042v1 5109 21 - 25752 AGATTTTTATTTTGATGAAAA i eulFla1.LGHW01011042v1 C 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e tarSyr2.KE950423v1 1006183 3826 + 1054607 I e otoGar3.GL873538 19675579 2106 - 27850971 I a score=41188.000000 s hg38.chrUn_KI270746v1 38486 8 + 66486 TCCTTA--CT s panPan2.chr2A 89847171 8 + 114371477 TCCTTA--CT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863358 8 - 998796 TCCTTA--CT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859554 8 + 94967081 TCCTTA--CT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108568010 10 + 108979918 TCCTCACTCT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704778 10 + 111193037 TCCTCACTCT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10570880 10 - 11597128 TCCTCACTCT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060138 10 - 5626091 TCCTCACTCT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16534015 10 + 107702431 TCCTCACTCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346136 10 - 409142 TCCTCACTCT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838416 10 + 108792865 TCCTTACTCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277009 10 - 28799539 TCCTTACTCT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98648 8 - 3620821 TCCTTA--CT i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 1010009 10 + 1054607 TTCCTCCTTT i tarSyr2.KE950423v1 I 3826 C 0 s eulFla1.LGHW01011042v1 5130 8 - 25752 TCCTTACT-- i eulFla1.LGHW01011042v1 C 0 N 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19675579 2106 - 27850971 I a score=782181.000000 s hg38.chrUn_KI270746v1 38494 112 + 66486 CTCTTTCTATTGGGCTCAGAGAGCACATTTTGTCTCTATATGAATATGGACAGTTAGCATTTGCCAACATGTA----TCTATTTTCTCTTATTTATA------GAAAAAGCTAAACTAAAAA s panPan2.chr2A 89847179 112 + 114371477 CTCTTTGTATTGGGCTTAGAGAGCACACTCTGTCTCTATATGAATATGGACAGTTAGCATTTGCCAACATGTA----TCTATTTTCTCTTATTTATA------GAAAAAGCTAAACTAAAAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863366 112 - 998796 CTCTTTGTATTGGGCTCAGAGAGCACACTCTGTCTCTATGTGAATATGGACAGTTAGCATTTGCCAACATGTA----TCTATTTTCTCTTATTTATA------GAAAAAGCTAAACTAAAAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859562 112 + 94967081 CTCTTTGTATTGGGCTCAGAGAGCACACTCTGTCTCTATATGAATATGGACAGTTAGCATTTGCCACCATGTA----TCTATTTTCTCTTATTTATA------GAAAAAGCTAAACTAAAAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108568020 111 + 108979918 CTCTTTGTATTGGGCTCAGAGAGCACACTCTGTCTCTATATGAATATGGACAGTTGGCATTTGCAAACATGTA----TCTATTTTCTCTTGTTTATA------GAAAAAGGTAAACT-AAAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704788 112 + 111193037 CTCTTTGTATTGGGCTCAGAGAGCACACTCTGTCTCTATATGAATATGGACAGTTGGCATTTGCAAACATGTA----TCTATTTTCTCTTGTTTATA------GAAAAAGGTAAACTAAAAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10570890 112 - 11597128 CTCTCTGTATTGGGCTCAGAGAGCACACTCTGTCTCTATATGAATATGGACAGTTGGCATTTGCAAACATGTA----TCTATTTTCTCTTGTTTATA------GAAAAAGGTAAACTAAAAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060148 112 - 5626091 CTCTCTGTATTGGGCTCAGAGAGCACACTCTGTCTCTATATGAATATGGACAGTTGGCATTTGCCAACATGTA----TCTATTTTCTCTTGTTTATA------GAAAAAGGTAAACTAAAAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16534025 112 + 107702431 CTCTTTGTATTGGGCTCAGAGAGCACACTCTGTCTCTATATGAATATGGACAGTTGGCATTTGCCAACATGTA----TCTATTTTCTCTTGTTTATA------GAAAAAGCTAAACTAAAAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346146 112 - 409142 CTCTTTGTATTGGGCTCAGAGAGCACACTCTGTCTCTATATGAATATGGACAGTTGGCATTTGCCAACATGTA----TCTATTTTCTCTTGTTTATA------GAAAAAGGTAAACTAAAAA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838426 112 + 108792865 CTCTTTGTATTGGGCTCAGAGAGTACACTCTGTCTCTATATGAACATGGACAGTTAACATTTGCCAACATGTA----TCTATTTTCTCTTGTTTATT------AAAAAAACTAAACTAAAAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277019 112 - 28799539 CTCTTTGTATTGGGCTC--AGAGTACACTCTGTCTCTATATGAACATGGACAGTTAGCATTTGCCAACATGTA----TCTATTTTCTCTTGTTTATT----AAAAAAAAACTAAACTAAAAA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98656 115 - 3620821 CTCTTTGTATTGGGCTCAGAGAGTACACTCTGTCTCTATATGAACATGGACAGTTAGCATTTGCCAACCTGTA----TCTATTTTCTCTTGTTTATTA---AAAAAAAAACTAAACTAAAAA i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 1010019 121 + 1054607 CTTTTTATATTGGTGT-AGAGAGCATATTCTATTTCTGTGTGCATATGGACACTTAGCATCTGCCAACATGTATCTGTCTATCTTTCCTTGTCTAAAAAGGGGGGAAAAGCCTTTTTAAAAA i tarSyr2.KE950423v1 C 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19675579 2106 - 27850971 I a score=10500.000000 s hg38.chrUn_KI270746v1 38606 1 + 66486 G s panPan2.chr2A 89847291 1 + 114371477 G i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863478 1 - 998796 G i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859674 1 + 94967081 G i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108568131 1 + 108979918 G i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704900 1 + 111193037 G i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10571002 1 - 11597128 G i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060260 1 - 5626091 G i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16534137 1 + 107702431 G i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346258 1 - 409142 G i manLeu1.NW_012101154v1 C 0 C 0 s rhiRox1.KN294404v1 84385 1 - 457820 G i rhiRox1.KN294404v1 N 0 N 0 s calJac3.chr14 14838538 1 + 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277131 1 - 28799539 G i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98771 1 - 3620821 G i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 1010140 1 + 1054607 G i tarSyr2.KE950423v1 C 0 I 1 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19675579 2106 - 27850971 I a score=322352.000000 s hg38.chrUn_KI270746v1 38607 42 + 66486 GGGGTTATATAAGGTCAGCAAAGGATGAGTTTGAGATGTTCG s panPan2.chr2A 89847292 42 + 114371477 GGGGTTATAGAAGTTCAGCAAAGGATGGGTTTGAGATGTTTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863479 42 - 998796 GGGGTTATAGAAGATCAGCAAAGGATGGGTTTGAGATGTTTG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859675 42 + 94967081 GGGGTTATAGAAGATCAGCAAAGGATGGGTTTGAGATGTTTG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108568132 42 + 108979918 GGGGTTATAGAAGGTCAGCAAAGGATGGGTTTGAGATGTTTG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704901 42 + 111193037 GGGGTTATAGAAGGTCAGCAAAGGATGGGTTTGAGATGTTTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10571003 42 - 11597128 GGGGTTATAGAAGGTCAGCAAAGGATGGGTTTGAGATGTTTG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060261 42 - 5626091 GGGGTTATAGAAGGTCAGCAAAGGATGGGTTTGAGATGTTTG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16534138 42 + 107702431 GGGGTTATAGAAGGTCAGCAAAGGATGGGTTTGAGATGTCTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346259 42 - 409142 GGGGTTATAGAAGGTCAGCAAAGGATGGGTTTGAGATGTTTG i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838539 42 + 108792865 GGGGTTATAGAAGATCAGCAAAGGGTGGGTTTGAGATGTTTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277132 42 - 28799539 GGGGTTATAGAAGATCAGCAAAGGGTGGGTTTGAGATGTTTG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98772 42 - 3620821 GGGGTTATTGAAGATCAGCAAAGGGTGGGTTTGAGATGTTTG i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE950423v1 1010142 41 + 1054607 GAGCTTATAGAATGTCAGCAAAGGGTAGA-TTGAGATGTTTG i tarSyr2.KE950423v1 I 1 N 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19675579 2106 - 27850971 I a score=1199608.000000 s hg38.chrUn_KI270746v1 38649 193 + 66486 GGTTGGTTAAGTGGGCATTTAGACAACAAGGTTTCTCCTTTGGCATGTTTAATGGACATCTTTGCAGTTTAAGATGACGCTTTTAAATTACTTCTCTCCTAATGATGACTTGAGTCCTGCTATTCAATGGGAGAGTCAATAAGATCCTGTAGGATCTTATTTGGAACTGACTTTGTCGATTTTAATTTTGTTC s panPan2.chr2A 89847334 193 + 114371477 GGTTGGTTAAGTGGGCATTTAGACAACAAGGCTTCTCCTTTGGTGTGTTTAATGGACATTTTTGCAGTTTAAGATGACGCTTTTAAATTACTTCTCTCCTAATGATGACTTGAGTCCTGCTATTCAATGGGAGAGTCAATAAGAGCCTGTAGGATCTTATTTGGAACTGACTTTGTCGATTTTAATTTTGTTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863521 193 - 998796 GGTTGGTTAAGCAGGCATTTAGACAACAAGGCTTCTCCTTTGGCGTGTTTAATGGACATCTTTGCAGTTTAAGATGACGCTTTTAAATTACTTCTCTCCTAATGATGACTTGAGTTCTGCTATTCAATGGGAGAGTCAATAAGATCCTGTAGGATCTTCTTTGGAACTGACTTTGTCGATTTTAATTTTGTTC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859717 193 + 94967081 GGTTGGTTAAGTGGGCATTTAGACAACAAGGCTTCTCCTTTGGCATGTTTAATGGACATCTTTGCAGTTTAAGATGATGCTTTTAAATTACTTCTCTCCTAATGATGACTTGAGTCCTGCTAGTCAATGGGAGAGTCAATAAGATCCTGTAGGATCTTATTTGGAACTGACTTTGTCGATTTTAATTTTGTTC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108568174 193 + 108979918 GGTTGGTTAAGTGGGCATTTAGACAACAAGCCTTCTCCTTTGGCATGTTTAATGGGCATCCTTGCAGTTTAAGATGACGCTTTTAAATTACTTCTCTCCTAATGATGACTTGAGTCCTGCTATTCAGTGGGAGAGTCAATAAGATCCTGTAGGATCTTATTTGGAGCTGACTTTGTTGATTTTAATTTTGTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17704943 193 + 111193037 GGTTGGTTAAGTGGGCATTTAGACAACAAGGCTTCTCCTTTGGCATGTTTAATGGGCATCCTTGCAGTTTAAGATGACGCTTTTAAATTACTTCTCTCCTAATGATGACTTGAGTCCTGCTATTCGGTGGGAGAGTCAATAAGATCCTGTAGGATCTTATTTGGAACTGACTTTGTTGATTTTAATTTTGTTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10571045 193 - 11597128 GGTTGGTTAAGTGGGCATTTAGACAACAAGGCTTCTCCTTTGGCATGTTTAATGGGCATCCTTGCAGTTTAAGATGACGCTTTTAAATTACTTCTCTCCTAATGATGACTTGAGTCCTGCTATTCGGTGGGAGAGTCAATAAGATCCTGTAGGATCTTATTTGGAACTGACTTTGTTGATTTTAATTTTGTTC i macNem1.NW_012014799v1 C 0 I 311 s cerAty1.NW_012001187v1 5060303 193 - 5626091 GGTTGGTTAAGTGGGCATTTAGACAACAAGTCTTCTCCTTTGGCATGTTTAATGGGCATCCTTGCAGTTTAAGATGACGCTTTTAAATTACTTCTCTCCTAATGATGACTTGAGTCCTGCTATTCGGTGGGAGAGTCAATAAGATCCTGTAGGATCTTATTTAGAACTGACTTTGTTGATTTTAATTTTGTTC i cerAty1.NW_012001187v1 C 0 I 313 s chlSab2.chr14 16534180 193 + 107702431 GGTTAGTTAAGTGGGCATTTAGACAACAAGGCTTCTCCTTTGGCATGTTTAATGGACATCCTTGCAGTTTAAGATGACACTTTTAAATTACTTCTCTCCTAATGATGACTTGAGTCCTGCTATTCGGTGGGAGAGTCAATAAGATCCTGTAGGATCTTATTTGGAACTGACTTTGTTGATTTTAATTTTGTTC i chlSab2.chr14 C 0 I 309 s manLeu1.NW_012101154v1 346301 193 - 409142 GGTTGGTTAAGTGGGCATTTAGACAACAAGGCTTCTCCTTTGGCATGTTTAATGGGCATCCTTGCAGTTTAAGATGATGCTTTTAAATTACTTCTCTCCTAATGATGACTTGAGTCCTGCTATTCGGTGGGAGAGTCAATAAGATCCTGTAGGATCTTATTTGGAACTGACTTTGTTGATTTTAATTTTGTTC i manLeu1.NW_012101154v1 C 0 I 313 s calJac3.chr14 14838581 184 + 108792865 AGTGGCTTAAGTGGGCATTTAGACAACACGGCTTCTCCTTTAGCATGTTTAATGCACA-CCTTGCACTTTAAGATGATGCTTTTTAATGACTTCTATTTTAATGATGCGTTGAGTCCTGCTACTCA----GATAGTCAATACTATCCTGTAAGATCTTACTTGGAATGGACTTTG----TTTTAATTTTGTTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277174 188 - 28799539 GGTGGGTTAAGTGGGCATTTAGACAACAGGGCTTCTCCTTTAGCATGTTTAATGGACA-CCTTGCAGTTTAAGATGATGCTTTTTAATGACTTCTATTTTAACGATGCCTTGAGTCCTGCTACTCAATGGGAGAGTCAATATGATCCTGTAAGATCTTACTTAGAATGGACTTTG----TTTTAATTTTGTTC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 98814 187 - 3620821 GGTGAGTTAAGTGGGCATTTAGACAACAGGGCTTCTCCTTTAGCATGTTTAATGGACA-CCTTGCAGTTTAAGATGATGCTTTTTAATGACTTCTATTTTAATGATGC-TTGAGTCCTGTTACTCAATGGGAGAGTCAGTACGATCCTGTAAGATCTTACTTAGAATGGACTTTG----TTTTAATTTTGTTC i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19675579 2106 - 27850971 I a score=22698.000000 s hg38.chrUn_KI270746v1 38842 3 + 66486 CTG s panPan2.chr2A 89847527 3 + 114371477 CTG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863714 3 - 998796 CTG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859910 3 + 94967081 CTG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108568367 3 + 108979918 CTG i rheMac8.chr13 C 0 I 310 s macFas5.chr13 17705136 3 + 111193037 CTG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10571549 3 - 11597128 CTG i macNem1.NW_012014799v1 I 311 C 0 s cerAty1.NW_012001187v1 5060809 3 - 5626091 CTG i cerAty1.NW_012001187v1 I 313 C 0 s chlSab2.chr14 16534682 3 + 107702431 CTG i chlSab2.chr14 I 309 C 0 s manLeu1.NW_012101154v1 346807 3 - 409142 CTG i manLeu1.NW_012101154v1 I 313 C 0 s calJac3.chr14 14838765 3 + 108792865 CTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277362 3 - 28799539 CTG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99001 3 - 3620821 CTG i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19675579 2106 - 27850971 I a score=130810.000000 s hg38.chrUn_KI270746v1 38845 26 + 66486 CTTGTTTTTAAATTTTCTTGTTGTTT s panPan2.chr2A 89847530 26 + 114371477 CTTGTTTTTAAATTTTCTTGTTGTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863717 26 - 998796 CTTGTTTTTAAATTTTCTTGTTGTTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859913 26 + 94967081 CTTGTTTTTAAATTTTCTTGTTGTTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108568680 26 + 108979918 CTTATTTTTAAATTTTCTTCTTGTTT i rheMac8.chr13 I 310 C 0 s macFas5.chr13 17705139 23 + 111193037 CCttttttt---tttttttttttttt i macFas5.chr13 C 0 I 627 s macNem1.NW_012014799v1 10571552 26 - 11597128 CTTATTTTTAAATTTTCTTCTTGTTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060812 26 - 5626091 CTTATTTTTAAATTTTCTTCTTGTTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16534685 26 + 107702431 CTTATTTTTAAATTTTCTTATTGTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346810 26 - 409142 CTTATTTTTAAATTTTCTTCTTGTTT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838768 26 + 108792865 CTTATTTTTAAAATTTCTTGAACTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277365 26 - 28799539 CTTATTTTTAAAATTTCTTGAACTTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99004 26 - 3620821 CTTATTTTTAAAATTTCTTGAACTTT i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19675579 2106 - 27850971 I a score=122306.000000 s hg38.chrUn_KI270746v1 38871 22 + 66486 CCCTAGAAAGGAAAGATGACGC s panPan2.chr2A 89847556 22 + 114371477 CCCTAGAAAGGAAAGATGACGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863743 22 - 998796 CCCTAGAAAGGAAAGATGATGC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859939 22 + 94967081 CCCTAGAAAGGAAAGATGATGC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108568706 22 + 108979918 CCCTAGAAAGGAAAGATGATGC i rheMac8.chr13 C 0 I 323 s macNem1.NW_012014799v1 10571578 22 - 11597128 CCCTAGAAAGGAAAGATGATGC i macNem1.NW_012014799v1 C 0 I 4 s cerAty1.NW_012001187v1 5060838 22 - 5626091 CCCTAGAAAGGAAAGATGATGC i cerAty1.NW_012001187v1 C 0 I 4 s chlSab2.chr14 16534711 22 + 107702431 CCCTAGAAAGGAAAGATTATGC i chlSab2.chr14 C 0 I 4 s manLeu1.NW_012101154v1 346836 22 - 409142 CCCTAGAAAGGAAAGATGATGC i manLeu1.NW_012101154v1 C 0 I 4 s calJac3.chr14 14838794 22 + 108792865 TCCTACAAAGGAAAGGTGATGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277391 22 - 28799539 TCCTACAAAGGAAAGATGATGC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99030 22 - 3620821 TCCTACAAAGGAAAGATGATGC i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19675579 2106 - 27850971 I e macFas5.chr13 17705162 627 + 111193037 I a score=89092.000000 s hg38.chrUn_KI270746v1 38893 16 + 66486 TTAGTTTTAAATATTT s panPan2.chr2A 89847578 16 + 114371477 TTGGTTTTAAATATTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863765 16 - 998796 TTGGTTTTAAATATTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859961 16 + 94967081 TTAGTTTTAAATATTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569051 16 + 108979918 TTAGTTTTAAATATTA i rheMac8.chr13 I 323 C 0 s macFas5.chr13 17705789 16 + 111193037 TTAGTTTTAAATATTA i macFas5.chr13 I 627 C 0 s macNem1.NW_012014799v1 10571604 16 - 11597128 TTAGTTTTAAATATTA i macNem1.NW_012014799v1 I 4 C 0 s cerAty1.NW_012001187v1 5060864 16 - 5626091 TTAGTTTTAAATATTA i cerAty1.NW_012001187v1 I 4 C 0 s chlSab2.chr14 16534737 16 + 107702431 TTAGTTTTAAATATTA i chlSab2.chr14 I 4 C 0 s manLeu1.NW_012101154v1 346862 16 - 409142 TTAGTTTTAAATATTA i manLeu1.NW_012101154v1 I 4 C 0 s calJac3.chr14 14838816 15 + 108792865 TTAGTTTTAAATATT- i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277413 15 - 28799539 TTAGTTTTAAATATT- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99052 15 - 3620821 TTAGTTTCAAATATT- i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chr13 103947556 10861 + 126811233 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19675579 2106 - 27850971 I a score=323978.000000 s hg38.chrUn_KI270746v1 38909 39 + 66486 AAAAATGTGCAAGTTGCTTTGCTATAATAAAACTAAATG s panPan2.chr2A 89847594 39 + 114371477 AAAAATGTGCAAGTTGCTTTGCTATAATAAAACTAAATG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863781 39 - 998796 AAAAATGTGCAAGTTGCTTTGCTATAATAAAACTAAATG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47859977 39 + 94967081 AAAAATGTGCAAGCTGCTTTGCTATAATAAAACTAAATG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569067 39 + 108979918 AAAAATGTGCAAGTTGCTTTGCTATAATAAAACTAAATG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17705805 39 + 111193037 AAAAATGTGCAAGTTGCTTTGCTATAATAAAACTAAATG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10571620 39 - 11597128 AAAAATGTGCAAGTTGCTTTGCTATAATAAAACTAAATG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060880 39 - 5626091 AAAAATGTGCAAGTTGCTTTGCTATAATAAAACTAAATG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16534753 39 + 107702431 AAAAATGTGCAAGTTGCTTTGCTATAATAAAACTAAATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346878 39 - 409142 AAAAATGTGCAAGTTGCTTTGCTATAATAAAACTAAATG i manLeu1.NW_012101154v1 C 0 C 0 s nasLar1.chrUn_JMHX01065601v1 1 39 + 650 AAAAATGTGCAAGTTGCTTTGCTATAATAAAACTAAATG i nasLar1.chrUn_JMHX01065601v1 n 10861 C 0 s calJac3.chr14 14838831 39 + 108792865 AAAAATGTGCAAGTTGCTTTGCTACAATAAAACTAAATG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277428 39 - 28799539 AGAAATGTGCAAGTTGCTTTGCTACAATAAAACTAAATG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99067 39 - 3620821 AAAAATGTGCAAGTTGCTTTGCTACAATAAAACTAAATG i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19675579 2106 - 27850971 I a score=493056.000000 s hg38.chrUn_KI270746v1 38948 63 + 66486 CATACATACAAAAAA-TAAAATTATAGTTGATGTGGTAGTGTTTGGAATTC-AAAATATAAATGC s panPan2.chr2A 89847633 63 + 114371477 CATACATACAAAAAA-TAAAATTATAGTTGATGTGGTAGTGTTTGGAATTC-AAAATATAAATGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863820 63 - 998796 CATATATACAAAAAA-TAACATTATAGTTGATGTGGTAGTGTTTGGAATTC-AAAATATAAATGC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860016 63 + 94967081 CATACATACAAAAAA-TAAAATTATAGTTGATGTGGTAGTGTTTGGAATTC-AAAATATAAATGC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569106 61 + 108979918 CATACATACAAAAA---AAAATTATAGTTGATGTGGTAGCGTTTAGAATTC-AAAATATAAATGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17705844 61 + 111193037 CATACATACAAAAA---AAAATTATAGTTGATGTGGTAGCGTTTAGAATTC-AAAATATAAATGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10571659 61 - 11597128 CATACATACAAAAA---AAAATTATAGTTGATGTGGTAGCGTTTAGAATTC-AAAATATAAATGC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060919 63 - 5626091 CATACATACAAAAAA-TAAAATTATAGTTGATGTGGTAGCGTTTAGAATTC-AAAATATAAATGC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16534792 63 + 107702431 CATACATACAAAAAA-TAAAATTATAGTTGATGTGGTAGCGTTTAGAATTC-AAAATATAAATGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346917 63 - 409142 CATACATACAAAAAA-TAAAATTATAGTTGATGTGGTAGCGTTTAGAATTC-AAAATATAAATGC i manLeu1.NW_012101154v1 C 0 C 0 s nasLar1.chrUn_JMHX01065601v1 40 63 + 650 CATACATACAAAAAA-TAAAATTATAGTTGATGTGGTAGTGTTTGGAATTC-AAAATATAAATGC i nasLar1.chrUn_JMHX01065601v1 C 0 I 317 s calJac3.chr14 14838870 65 + 108792865 CATACATACAAAAAACTAAAATTATAGTTGCTGTGGTAGTGTTTGGAATTCAAAAATATAAATGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277467 65 - 28799539 CATACATACAAAAAACTAAAATTATAGTTGATGTGGTAGTGTTTGGAATTCAAAAATATAAATGC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99106 65 - 3620821 CATACATACAAAAAACTAAAATTATAGTTGATGTGGTAGTGTTTGGAATTCAAAAATATAAATGC i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19677685 63 - 27850971 CACATATATAAGTATTTAAAATTATAGTTGATGTGGTAGTA-CTGGAATTCAAAAATATACATT- i otoGar3.GL873538 I 2106 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I a score=1075217.000000 s hg38.chrUn_KI270746v1 39011 157 + 66486 TTAGCATGAGGTAATCCTTTATCTTTCCACATTTTACCAG-TTTGCAAGTTTGAGTATTTAACTGATAAAATGTAATACAAAAGCAAGAAGAATGTTGTGTTTTAGTCCTAGAGcaggggtctgtgaacttttctgtaaagggccagatagtattatt s panPan2.chr2A 89847696 156 + 114371477 TTAGCACGAGGTAATCCTTTATCTTTCCACATTTTACCAG-TTTGTAAGTTTGAGTATGTAACTGATAAAATGTAATTCAAAAGCAAGAAGAATGTTGTGTTTTAGTCCTAGAGcaggggtcagtgaac-tttctgtaaagggccagatagtattatt i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 863883 156 - 998796 TTAGCATGAGGTAATCCTTTATCCTTCCACATTTTACCAG-TTTGTAAGTTTGAGTATGTAACTGATAAAATGTAATTCAAAAGCAAGAAGAATGTTGTGTTTTAGTCCTAGAGcaggggtcagtgaac-tttctgtaaagggccagatagtattatt i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860079 157 + 94967081 TTAGCATGAGGTAAGCCTTTATCTTTCCACATTTTACCAG-TTTGTAAGTTTGAGTATTTAACTGATAAAATGTAATTCAAAAGCAAGAAAAATGTTGTGTTTTAGTCCTAGATcaggggtccgtgagcttttctgtaaaggatcagatagtattatt i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569167 157 + 108979918 TTAGCATGAGGTAATCCTTTATCTTTCCACATTTTACCAG-TTTGTAAGTTTGAGTGTTTATCTGATAAAATGTAATTCAAAAGCAAGAAGAATGTTGTGTTTTAGTCCTAGAGcaggggtcagtgaacttttctgtaaagggccagacagtattttt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17705905 157 + 111193037 TTAGCATGAGGTAATCCTTTATCTTTCCACATTTTACCAG-TTTGTAAGTTTGAGTGTTTATCTGATAAAATGTAATTCAAAAGCAAGAAGAATGTTGTGTTTTAGTCCTAGAGcaggggtcagtgaacttttctgtaaagggccagacagtattttt i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10571720 157 - 11597128 TTAGCATGAGGTAATCCTTTATCTTTCCACATTTTACCAG-TTTGTAAGTTTGAGTGTTTATCTGATAAAATGTAATTCAAAACCAAGAAGAATGTTGTGTTTTAGTCCTAGAGcaggggtcagtgaacttttctgtaaagtgccagacagtattttt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5060982 157 - 5626091 TTAGCATGAGGTAATCCTTTATCTTTCCACATTTTACCAG-TTTGTAAGTTTGAGTGTTTATCTGATAAAATGTAATTCAAAAGCAAGAAGAATGTTGTGTTTTAGTCCTAGAGcaggggtcagtgaacttttctgtaaagggccagatagtattttt i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16534855 157 + 107702431 TTAGCATGAGGTAATCCTTTATCTTTCCACATTTTACCAG-TTTGTAAGTTTGAGTGTTTATCTGATAAAATGCAATTCAAAAGCAAGAAGAATGTTGTGTTTTAGTCCTAGAGcaggggtcagtgaacttttctgtaaagggccagatagtattttt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 346980 157 - 409142 TTAGCATGAGGTAATCCTTTATCTTTCCACATTTTACCAG-TTTGTAAGTTTGAGTGTTTATCTGATAAAATGTAATTCAAAAGCAAGAAGAATGTTGTGTTTTAGTCCTAGAGcaggggtcagtgaacttttctgtaaagggccagatagtattttt i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14838935 157 + 108792865 TTACCATGAGGTAATTCTTTATCTTTCCACATTTTACCAA-TTTGTAAGTTTGAGTATTTATCTGATAAAATATCATTCAGAAGCAAGAAGAATATTGTGTTTTAGTCCTAGAGcatggatcagtaatcttttctctacagggccaggtagtattatt i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277532 154 - 28799539 TTACCATGAGGTAATCCTTTAACTTTCCACATTTTATCAA-TTTGTAAGTTTGAGTATTTATCTGATAAAATATCATTCAAAAGCAAGAAGAATATTGTGTTTTAGTTCTAGAGcatggatcagtaaacttttctgtacagggccagataa---tatt i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99171 157 - 3620821 TTACCATGAGGTAATCCTTTATCTTTCCACATTTTACCAA-TTTGTAAGTTTGAGTATTTATCTGATAAAATATCATTCAAAAGCAAGAAGAATATTGTGTTTTAGTCCTAGAGcatggatcagtaaacttctctgtacagggccagatagtattatt i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19677748 148 - 27850971 TTACTGTACTGTAATTTCCTTTCTTCCCTTATTTTACTAATTTTACAAATTTGAGTAT----CTGATAAAATACAATTTCAGAGCAAGAACA---CTATGTTTTAGTCTTAGAAcaaaaattggtaaatgtgtctgtaaaagcccagatactatt--- i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016839393v1 222 1225 + 3426 I e nasLar1.chrUn_JMHX01065601v1 103 317 + 650 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I a score=9555.000000 s hg38.chrUn_KI270746v1 39168 1 + 66486 t s panPan2.chr2A 89847852 1 + 114371477 t i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864039 1 - 998796 t i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860236 1 + 94967081 t i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569324 1 + 108979918 t i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706062 1 + 111193037 t i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10571877 1 - 11597128 t i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5061139 1 - 5626091 t i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535012 1 + 107702431 t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 347137 1 - 409142 t i manLeu1.NW_012101154v1 C 0 C 0 s rhiBie1.NW_016839393v1 1447 1 + 3426 t i rhiBie1.NW_016839393v1 I 1225 I 171 s calJac3.chr14 14839092 1 + 108792865 t i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277686 1 - 28799539 t i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99328 1 - 3620821 t i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19677896 1 - 27850971 t i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 103 317 + 650 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I a score=1024836.000000 s hg38.chrUn_KI270746v1 39169 158 + 66486 aaggctttgtgagccataatatcactgttgcaataactcagccctgcagttatagcaca-aaagtagccacaaacaata---------------------tgcagattgaaggggtgtggcagtgtcccacta-aaattaattac-aaaaaacaggtaatgggATGATTTATCCTAGATTCT s panPan2.chr2A 89847853 158 + 114371477 aagggtttgtgagccataagatctttgttgcaataactcagccctgcaattacagcaca-aaagtagccatgaacgata---------------------tgcagactgaaggggtgtagcagtgtcccacta-aaattaattac-aaaaaacaggtaatgggATGATTTCTCCTACATTAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864040 158 - 998796 aaggctttgtgagccataagatccttgttgcaataactcagccctgtagttatagcaca-aaagtagccattaacgata---------------------tgcagattgaaggggtatagcagtgtcccacta-aaattaattac-aaaaaacaggtaatgggATGATTTCTCCTACATTAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860237 158 + 94967081 aaggctttgtgagccataagatccttgttgcaataactcagccctgctgttatagcaca-aaagtagccatgaacaata---------------------tgcagattgaaggggtatagcagtgtcccacta-aaattaattac-aaaaaacaggTAATGAGATGATTTCTCCTAGATTAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569325 158 + 108979918 aaggctttgtgagccataagatccttgttgcaataactcagccctgccattatagcaca-aaagtagccgtaaacagta---------------------tgcagattgaaggggtgtagcagtgtcccactc-aaattaattac-aaaaaacaggtaatgggatggtttCTACTAGATTAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706063 158 + 111193037 aaggctttgtgagccataagatccttgttgcaataactcagccctgccattatagcaca-aaagtagccgtaaacagta---------------------tgcagattgaaggggtgtagcagtgtcccactc-aaattaattac-aaaaaacaggtaatgggatggTTTCTACTAGATTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10571878 158 - 11597128 aaggctttgtgagccataagatccttgttgcaataactcagccctgccattatagcaca-aaagtagctgtaaacagta---------------------tgcagattgaaggggtgtagcagtgtcccactc-aaattaattac-aaaaaacaggtaatgggatggTTTCTACTAGATTAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5061140 158 - 5626091 aaggctttgtgagccataagatccttgttgcagtaactcagccctgccattgtagcaca-aaagtagccgtaaacagta---------------------tgcagattgaaggggtgtagcagtgttccactc-aaattaattac-aaaaaacaggtaatgggatggTTTCTACTAGATTAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535013 158 + 107702431 aaggctttgtaagccataagatccttgttgcaataactcagccctgccattatagcac--aaagtagccgtaaacagta---------------------tgcagattgaaggggtgtagcagtgtcccactc-aaattaattacaaaaaaacaggtaatgggatggTTTCTACTAGATTAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 347138 158 - 409142 aaggctttgtgagccataagatccttgttgcagtaactcagccctgccattatagcaca-aaagtagccgtaaacagta---------------------tgcagattgaaggggtgtagcagtgtcccactc-aaattaattac-aaaaaacaggtaatgggatggTTTCTACTAGATTAT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14839093 158 + 108792865 caggctttgtgagccataagatccctctta-aatcactcaaccctgcagttatagcata-aaagtagccataaacaata---------------------tgtggattgaaggggtataacagtgttccagca-aaattagtcacaaaaaaacaggtaatgagATGACTTTTCCTGGATTAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277687 158 - 28799539 aaggctttgtgagccataagatccctctta-aataactcaaccctacagttatagcatg-aaagtagccataaacaata---------------------tgtggactgaaggggtatagcagtgttccagta-aaattagttacaaaaaaacaggtaatgggATGATTTTTCCTGGATTAT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99329 179 - 3620821 aaggctttgtaagccataagatccctctta-aataactcaaccctacagttatagcatg-aaagttgccataaacaatatggcttgaatacataaacaattgtggattgaaggggtatagcagtgttccagta-aaattagttacaaaaaaacaggtaatgggATGATTTTTCCTGAATTAT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19677897 155 - 27850971 taggctttgtgagccgtaagatccttgttacaacaattcaactctgcagttacagcacagaaaatagcca-aaactatg---------------------tgtagattgaaggggagtgtctgtgttccagtataatttagttac--caaagcaggtgatggca-gatttgTTCTAGATT-- i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016839393v1 1448 171 + 3426 I e nasLar1.chrUn_JMHX01065601v1 103 317 + 650 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I a score=46053.000000 s hg38.chrUn_KI270746v1 39327 12 + 66486 GACC-TTTTTT---AA s panPan2.chr2A 89848011 12 + 114371477 GACC-TTTTTT---AA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864198 12 - 998796 GACC-TTTTTT---AA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860395 12 + 94967081 GACC-TTTTTT---AA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569483 10 + 108979918 GATC-TTTTTT----- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706221 10 + 111193037 GATC-TTTTTT----- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10572036 10 - 11597128 GATC-TTTTTT----- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5061298 10 - 5626091 GATC-TTTTTT----- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535171 10 + 107702431 GATC-TTTTTT----- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 347296 10 - 409142 GATC-TTTTTT----- i manLeu1.NW_012101154v1 C 0 C 0 s nasLar1.chrUn_JMHX01065601v1 420 13 + 650 GATC-TTTTTTAAA-- i nasLar1.chrUn_JMHX01065601v1 I 317 C 0 s calJac3.chr14 14839251 12 + 108792865 GACC-TTTTTT---AA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277845 13 - 28799539 GACCTTTTTTT---AA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99508 12 - 3620821 GAAC-TTTTTT---AA i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016839393v1 1448 171 + 3426 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19678052 0 - 27850971 C a score=3276.000000 s hg38.chrUn_KI270746v1 39339 1 + 66486 A s panPan2.chr2A 89848023 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864210 1 - 998796 A i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860407 1 + 94967081 A i nomLeu3.chr14 C 0 C 0 s nasLar1.chrUn_JMHX01065601v1 433 1 + 650 A i nasLar1.chrUn_JMHX01065601v1 C 0 C 0 s rhiBie1.NW_016839393v1 1619 1 + 3426 A i rhiBie1.NW_016839393v1 I 171 I 25 s calJac3.chr14 14839263 1 + 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277858 1 - 28799539 A i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99520 1 - 3620821 A i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19678052 0 - 27850971 C e manLeu1.NW_012101154v1 347306 0 - 409142 C e chlSab2.chr14 16535181 0 + 107702431 C e cerAty1.NW_012001187v1 5061308 0 - 5626091 C e macNem1.NW_012014799v1 10572046 0 - 11597128 C e rheMac8.chr13 108569493 0 + 108979918 C e macFas5.chr13 17706231 0 + 111193037 C a score=47739.000000 s hg38.chrUn_KI270746v1 39340 15 + 66486 T-AA-AAAAGATTGTGA s panPan2.chr2A 89848024 15 + 114371477 T-AA-AAAAGATTGTGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864211 15 - 998796 T-AA-AAAAGATTGTGA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860408 16 + 94967081 TAAA-AAAAGATTGTGA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569493 12 + 108979918 -----AAAAGATCTTAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706231 12 + 111193037 -----AAAAGATCTTAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10572046 12 - 11597128 -----AAAAGATCTTAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5061308 12 - 5626091 -----AAAAGATCTTAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535181 12 + 107702431 -----AAAAGATCTTAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 347306 12 - 409142 -----AAAAGATCTTAA i manLeu1.NW_012101154v1 C 0 C 0 s nasLar1.chrUn_JMHX01065601v1 434 15 + 650 --TAAAAAAGATTGTGA i nasLar1.chrUn_JMHX01065601v1 C 0 I 19 s calJac3.chr14 14839264 15 + 108792865 -TAA-AAAAGACTGTGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277859 15 - 28799539 -GAA-AAAAGACTGTGA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99521 15 - 3620821 -TAA-AAAAGACTGTGA i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016839393v1 1620 25 + 3426 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19678052 0 - 27850971 C a score=62718.000000 s hg38.chrUn_KI270746v1 39355 9 + 66486 TAGTCTAAA s panPan2.chr2A 89848039 9 + 114371477 TAGTCTAAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864226 9 - 998796 TAGTCTAAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860424 9 + 94967081 TAGTCTAAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569505 9 + 108979918 TAGTCTAAA i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17706243 9 + 111193037 TAGTCTAAA i macFas5.chr13 C 0 I 1 s macNem1.NW_012014799v1 10572058 9 - 11597128 TAGTCTAAA i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 5061320 9 - 5626091 TAGTCTAAA i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 16535193 9 + 107702431 TAGTCTAAA i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 347318 9 - 409142 TAGTCTAAA i manLeu1.NW_012101154v1 C 0 I 1 s calJac3.chr14 14839279 9 + 108792865 TATTCTAAA i calJac3.chr14 C 0 I 3 s saiBol1.JH378124 27277874 9 - 28799539 TAGTCTAAA i saiBol1.JH378124 C 0 I 3 s cebCap1.NW_016107537v1 99536 9 - 3620821 TAGTCTAAA i cebCap1.NW_016107537v1 C 0 I 3 e rhiBie1.NW_016839393v1 1620 25 + 3426 I e nasLar1.chrUn_JMHX01065601v1 449 19 + 650 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19678052 0 - 27850971 C a score=8281.000000 s hg38.chrUn_KI270746v1 39364 1 + 66486 A s panPan2.chr2A 89848048 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864235 1 - 998796 A i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860433 1 + 94967081 A i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569515 1 + 108979918 A i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17706253 1 + 111193037 A i macFas5.chr13 I 1 C 0 s macNem1.NW_012014799v1 10572068 1 - 11597128 A i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 5061330 1 - 5626091 A i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 16535203 1 + 107702431 A i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 347328 1 - 409142 A i manLeu1.NW_012101154v1 I 1 C 0 s rhiBie1.NW_016839393v1 1645 1 + 3426 A i rhiBie1.NW_016839393v1 I 25 I 73 s calJac3.chr14 14839291 1 + 108792865 A i calJac3.chr14 I 3 C 0 s saiBol1.JH378124 27277886 1 - 28799539 a i saiBol1.JH378124 I 3 C 0 s cebCap1.NW_016107537v1 99548 1 - 3620821 A i cebCap1.NW_016107537v1 I 3 C 0 e nasLar1.chrUn_JMHX01065601v1 449 19 + 650 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19678052 0 - 27850971 C a score=51795.000000 s hg38.chrUn_KI270746v1 39365 8 + 66486 Tattttat s panPan2.chr2A 89848049 8 + 114371477 Tattttat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864236 8 - 998796 TATTTTAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860434 8 + 94967081 Tattttat i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569516 8 + 108979918 CATTTTAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706254 8 + 111193037 CATTTTAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10572069 8 - 11597128 CATTTTAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5061331 8 - 5626091 CATTTtat i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535204 8 + 107702431 CATTTTAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 347329 8 - 409142 CATTTTAT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14839292 8 + 108792865 TATTTTAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277887 8 - 28799539 tattttat i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99549 8 - 3620821 TATTTtat i cebCap1.NW_016107537v1 C 0 C 0 e rhiBie1.NW_016839393v1 1646 73 + 3426 I e nasLar1.chrUn_JMHX01065601v1 449 19 + 650 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I e otoGar3.GL873538 19678052 0 - 27850971 C a score=362233.000000 s hg38.chrUn_KI270746v1 39373 59 + 66486 a-----tatattttgttgattcattcatctactgatggacatttaggtcatttccaaatGTAA-T s panPan2.chr2A 89848057 58 + 114371477 a-----tatattttgttgattcattcatctactgatggacatttaggtcatttctaaatGTAA-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864244 58 - 998796 A-----TatattttgttgattcattcatctactgatggacatttaggtcatttctaaatGTAA-- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860442 59 + 94967081 a-----tatattttgttgattcattcatctactgatggacatttaggtcatttccaaatGTAA-T i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569524 60 + 108979918 A-----TGTATTTTGTTGGTTCGTTTATCTACTAATGGACATTTAGATCATTTCCAAATGTAATT i rheMac8.chr13 C 0 I 1 s macFas5.chr13 17706262 59 + 111193037 A-----TGTATTTTGTTGGTTCGTTTATCTACTAATGGACATTTAGATCATTTCCAAATGTAA-T i macFas5.chr13 C 0 I 1 s macNem1.NW_012014799v1 10572077 59 - 11597128 A-----TGTATTTTGTTGGTTCGTTTATCTACTAATGGACATTTAGATCATTTCCAAATGTAA-T i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 5061339 59 - 5626091 a-----tgtattttgttggttcattcatctactaatggacatttagatcatttccaaatGTAA-T i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 16535212 59 + 107702431 A-----TGTATTTTGTTGGTTCGTTCATCTACTAATGGACATTTAGATCATTTCCAAATGTAA-T i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101154v1 347337 59 - 409142 A-----TGTATTTTGTTGGTTCGTTCATCTACTAATGGACATTTAGATCATTTCCAAATGTAA-T i manLeu1.NW_012101154v1 C 0 I 1 s nasLar1.chrUn_JMHX01065601v1 468 58 + 650 A-----TGTATTTTGTTGGTTCATTCAT-TACTAATGGACATTTAGATCATTTCCAAATGTAA-T i nasLar1.chrUn_JMHX01065601v1 I 19 n 19 s calJac3.chr14 14839300 59 + 108792865 A-----TatattttgttgatttattcatcaactgatggacatttaggtcatttccaAATGTAA-A i calJac3.chr14 C 0 I 5 s saiBol1.JH378124 27277895 56 - 28799539 atatattatattttGTTGATTTATTCATCTACTGATGGACATTTAA--------CAAATATAA-A i saiBol1.JH378124 C 0 I 5 s cebCap1.NW_016107537v1 99557 64 - 3620821 atatattatattttgttgatttattcttctactgatgaacatttaggtcatttccaaatATAA-A i cebCap1.NW_016107537v1 C 0 I 5 s otoGar3.GL873538 19678052 14 - 27850971 ------------------------------ATTAATAAACCTTT--------------------- i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016839393v1 1646 73 + 3426 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I a score=39211.000000 s hg38.chrUn_KI270746v1 39432 6 + 66486 TTTTTT s panPan2.chr2A 89848115 6 + 114371477 TTTTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864302 6 - 998796 TTTTTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860501 6 + 94967081 TTTTTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569585 6 + 108979918 TTTTTT i rheMac8.chr13 I 1 C 0 s macFas5.chr13 17706322 6 + 111193037 TTTTTT i macFas5.chr13 I 1 C 0 s macNem1.NW_012014799v1 10572137 6 - 11597128 TTTTTT i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 5061399 6 - 5626091 TTTTTT i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 16535272 6 + 107702431 TTTTTT i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101154v1 347397 6 - 409142 TTTTTT i manLeu1.NW_012101154v1 I 1 C 0 s calJac3.chr14 14839364 6 + 108792865 TGTTTC i calJac3.chr14 I 5 C 0 s saiBol1.JH378124 27277956 6 - 28799539 TCTTTT i saiBol1.JH378124 I 5 C 0 s cebCap1.NW_016107537v1 99626 6 - 3620821 TGTTTT i cebCap1.NW_016107537v1 I 5 C 0 s otoGar3.GL873538 19678066 4 - 27850971 --TTTT i otoGar3.GL873538 C 0 C 0 e rhiBie1.NW_016839393v1 1646 73 + 3426 I e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I a score=9555.000000 s hg38.chrUn_KI270746v1 39438 1 + 66486 T s panPan2.chr2A 89848121 1 + 114371477 T i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864308 1 - 998796 T i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860507 1 + 94967081 T i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569591 1 + 108979918 T i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706328 1 + 111193037 T i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10572143 1 - 11597128 T i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5061405 1 - 5626091 T i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535278 1 + 107702431 T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 347403 1 - 409142 T i manLeu1.NW_012101154v1 C 0 C 0 s rhiBie1.NW_016839393v1 1719 1 + 3426 T i rhiBie1.NW_016839393v1 I 73 N 0 s calJac3.chr14 14839370 1 + 108792865 T i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277962 1 - 28799539 T i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99632 1 - 3620821 T i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19678070 1 - 27850971 T i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I a score=1801544.000000 s hg38.chrUn_KI270746v1 39439 281 + 66486 AATTCTTTGTTTTAGTTTCAAGAAATACAGGATCAACTTACAGCTACTATAAGATGTACTAAGGAGATGGAAGGTGATGCACAAAAGTAAAATTTGAAGCAGCACACAAAATAACTTGAGTATTTATAAAGCAAAAGAGCACTGTAGTATGAAAATTG-TATCAGTTATGATA---AGTATGTCTTTGTGAAGCCAA--AAATGTTTCATCTGTAAGCTATATTGACATACATCA-TTTTTCTACATTATTCCTAAATTTTGCATATTATCAACAAAACACAGGTAGA- s panPan2.chr2A 89848122 283 + 114371477 AATTCTTTGTTTTAGCTTCAAGAAATACAGGATCAACTTACAGCTACTCTAAGATGTACTAAGGAGATGGAAGGTGACGCACAAAAGTAAAATTTGAAGCAGCGCACAAAATAACTTGAGTATTTATAAAGCAAAAGAGCACTGTAGTATGAAAATTA-TATCAGTTATGATAATTAGTATGTCTTTGTGAAGCCAA--AAAAGTTTCATTTGTAAGCTGTATTGAAATACATCA-TTTTTCTACATTATTCCTAAATTTTGCATATTATCAACAAAACGCAGGTAG-- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864309 283 - 998796 AATTCTTTGTTTTAGCTTCAAGAAATACAGGATCAACTTACAGCTACTATAAGATGTACTAAGGAGATGGAAGACAACGCACAAAAGTGAAATTTGAAGCAGCGCACAAAATAACTTGAGTATTTATAAAGCAAAAGAGCACTGTAGTATGAAAATTG-TATCAGTTATGATAATAAGTATGTCTTTGTGAAGCCAA--AAAAGTTTCATTTGTAAGCTGTATTGAAATACATCA-TTTTTCTACATTATTCCTAAATTTTGCATATTATCAACAAAACACAGGTAG-- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860508 283 + 94967081 AATTCTTTGTTTTAGTTTCAAGAAATACGGGATCAACTTATAGCTACTATAAGATGTACTGAGGAGATGGAAGGCGACGCACAAAAGTAAAATTTGAAGCAGCACACAAAATAACTTGAGTATTTATAAAGCAAAAGAGCACTATAGTATGAAAATTG-TATCAGTTATGATAATAAGTGTGTCTTTGTGAAGCCAA--AAAAGTTTCATCTGTAAGCTATATTGAAATACATCA-TTTTTCTACATTATTCCTAAATTTTGCATATTATCAACAAAACACAGGTAG-- i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569592 283 + 108979918 AATTCTTTGTTTTAGTTTCAAGAAATACAGGATCAACTTACAGCTACTATAAGATGTACTAAGAAGACGGAAGGCCATGCACACAAGTAAAATTTGAAGCAGCACACAAAATAACTTGAGTATTTATAAAGCAAAAGAGCACTGTAGTATGAAAATTG-TATCAGTTATGATAATAAGTATGTCTTTGTGAAACCAA--AGAAGTTTCATTTGTAAGCTATGTTGAAATACATCA-TTTTTCTATATTATTCCTAAATTTTTCATATTATCAACAAAACGCAGGTAG-- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706329 283 + 111193037 AATTCTTTGTTTTAGTTTCAAGAAATACAGGATCAACTTACAGCTACTATAAGATGTACTAAGAAGACGGAAGGCCATGCACACAAGTAAAATTTGAAGCAGCACACAAAATAACTTGAGTATTTATAAAGCAAAAGAGCACTGTAGTATGAAAATTG-TATCAGTTATGATAATAAGTATGTCTTTGTGAAACCAA--AGAAGTTTCATTTGTAAGCTATGTTGAAATACATCA-TTTTTCTATATTATTCCTAAATTTTTCATATTATCAACAAAACGCAGGTAG-- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10572144 283 - 11597128 AATTCTTTGTTTTAGTTTCAAGAAATACAAGATCAACTTACAGCTACTATAAGATGTACTAAGAAGACGGAAGGCCATGCACACAAGTAAAATTTGAAGCAGCACACAAAATAACTTGAGTATTTATAAAGCAAAAGAGCACTGTAGTATGAAAATTG-TATCAGTTATGATAATAAGTATGTCTTTGTGAAACCAA--AGAAGTTTCATTTGTAAGCTATGTTGAAATACATCA-TTTTTCTATATTATTCCTAAATTTTTCATATTATCAACAAAACGCAGGTAG-- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5061406 283 - 5626091 AATTCTTTGTTTTAGTTTCAAGAAATACGGGATCAACTTATAACTACTATAAGATGTACTAAGGAGACGGAAGGCCATGTACACAAGTAAAATTTGAAGCAGCACACAAAATAACTTGAGTATTTATAAAGCAAAAGAGCACTGTAGTATGAAAATTG-TATCAGTTATGATAATAAGTATGCCTTTGTGAAGCCAA--AGAAGTTTCATTTGTAAGCTATGTTGAAATACATCA-TTTTTCTATATTATTCCTAAATTTTTCATATTATCAACAAAACGCAGGTAG-- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535279 279 + 107702431 AATTCTTTGTTTTAGTTTCCAGAAATACAGGATCAACTTACAGCGACTATAAGATGTACTAAGGAGATGGAAGGCCATGTACACAAGTAAAATTTGAAGCAGCACACAAAATAACTTGAG----TATAAAGCAAAAGAGCACTGTAGTATGAAAATTG-TATCAGTTATGATAATAAGTATGTCTTTGTGAAGCCAA--AGAAGTTTCATTTGTAAGCTATGTTGAAATACATCA-TTTTTCTATATTATTCCTAAATTTTTCATATTATCAACAAAATGCAGGTAG-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 347404 283 - 409142 AATTCTTTGTTTTAGTTTCAAGAAATACGGGATCAACTTATAGCTACTATAAGATGTACTAAGAAGACGGAAGGCCATGCACACAAGTAAAATTTGAAGCAGCACACAAAATAACTTGAGTATTTATAAAGCAAAAGAGCACTGTAGTATGAAAATTG-TATCAGTTATGATAATAAGTATGCCTTTGTGAAGCCAA--AGAAGTTTCATTTGTAAGCTATGTTGAAATACATCA-TTTTTCTATATTATTCCTAAATTTTTCATATTATCAACAAAACGCAGGTAG-- i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14839371 253 + 108792865 AATTCTTTGTTTTAGTTTCAGGAAATACAGGATCAACTTACAGCAACTTTAAGATGTACTGAGAAGATGCAAGGCGACGTAAAAAAGTACAGTTTGAA------CACAAAATAACTTGAGTATTTATAAAGCAAAAGAGCAATGTAGTATGAGAATTGTTATCAGTTATGATAATAATTATGCCTTTGTGAAGCCAAGGAAAAGTTTCATTTGTAAACTATATTGAAATGCATCA-TTTTTCTACATTATTCCT---------------------------AGGTAG-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27277963 254 - 28799539 AATTCTTTGTTTTAGTTTCAGGGAATACAGGATCAACTTACAGCGACTTTAAGACGTACTGAGAAGACGCAAGGCCACATACAGAAGTACAGTTTGAA------CACAAAATAACCTGAGTATTTATAAAGCAAAAGAGCACTGTAGTATGAGAATTGTTATCAGTTATGATAATAAGTATGCCTTTGTGAAGCCAAGGAAAAGTTTCATTTGTAAATTATATTGAAATACGTCATTTTTTCTACATTATTCCT---------------------------AGGTAG-- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99633 253 - 3620821 AATTCTTTGTTTTAGTTTCAGGAAATACAAGATCAACTTACAGCGACTTTAAGACGTGCTGAGAAGATGCAAGGCCACATACAAAAGTACAGTTTGAA------CACAAAATAACTTGAGTATTTATAAAGCAAAAGAGCATTGTAGTATGAGAATTGTTATCAGTTATGATAATAAGTATGCCTTTGTGAAGCCAAGGAAAAGTTTCATTTGTAAACTATATTAAAATACATCA-TTTTTCTACATTATTCCT---------------------------AGGTAG-- i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19678071 273 - 27850971 TATTCTTCATTGTAGTTGGAGGAAGCACGGGATCAACACACAGAGGCTGTAAGATGTGTGGAGAAGATGCAAGATCATGTGCAAAAGTACTATTTAAAGCAGAACACAAAATA-----------CAATAAGCAAATAAGTAGTGTAGTGTGAGCGTTT-TATCAGTTTTGATCATAAGTACATCTCTATGAAGCCAAGGGAATATTTGATT--TAAGCTATTTTGAAATGTACAA-TTTTTGTACACTAACCCTAAATTTTGAGTGTTACCTAGAAAACTCAGCTAG-A i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11217629 1450 + 13868332 I a score=9555.000000 s hg38.chrUn_KI270746v1 39720 1 + 66486 A s panPan2.chr2A 89848405 1 + 114371477 A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864592 1 - 998796 A i gorGor5.CYUI01015730v1 C 0 C 0 s ponAbe2.chr2a_random 11219079 1 + 13868332 A i ponAbe2.chr2a_random I 1450 I 973 s nomLeu3.chr14 47860791 1 + 94967081 A i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569875 1 + 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706612 1 + 111193037 A i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10572427 1 - 11597128 A i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5061689 1 - 5626091 A i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535558 1 + 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 347687 1 - 409142 A i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14839624 1 + 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27278217 1 - 28799539 A i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99886 1 - 3620821 A i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19678344 1 - 27850971 A i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I a score=295988.000000 s hg38.chrUn_KI270746v1 39721 45 + 66486 AAAATGACACAGTAGCCCAGTCATCTACTCTTGTGTTTGTTAAGA s panPan2.chr2A 89848406 45 + 114371477 AAAATGACACAGTAGCCCAATCATCTACTTTTGCGATCATTAAGA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864593 45 - 998796 AAAATGACACAGCAGCCCAATCATCTACTTTTGTGACCGCTAAGA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860792 45 + 94967081 AAAATGACACAGTAGCCCAATCATCTACTTTTGCGATCGCTAAGA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569876 45 + 108979918 AAAATGACACAGTAGCCCAATCATCTACTTTTACAATTGCTAAGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706613 45 + 111193037 AAAATGACACAGTAGCCCAATCATCTACTTTTACAATTGCTAAGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10572428 45 - 11597128 AAAATGACACAGTAGCCCAATCATCTACTTTTACAATTGCTAAGA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5061690 45 - 5626091 AAAATGACACAGTAGCCCAATCATCTACTTTTACAATTGCTAAGA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535559 45 + 107702431 AAAATGACACAGTAGCCCAATCATCTACTTTTACAATTGCTAAGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 347688 45 - 409142 AAAATGACACAGTAGCCCAATCATCTACTTTTACAATTGCTAAGA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14839625 45 + 108792865 AAAATGACACAGTTGCCCAAACATCTACTTTTAAAATCTCTAAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27278218 45 - 28799539 AAAATGACATAGTTGCCCAAACATCTACTTTTAAAATCTCTAAGA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99887 45 - 3620821 AAAATGACACAGTTGCCCAAACATTTACTTTTAAGATCTCTAAGA i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19678345 43 - 27850971 --AATGATACAGTTGCCAGACCACCTACtttttttttttttgaga i otoGar3.GL873538 C 0 I 243 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11219080 973 + 13868332 I a score=2008758.000000 s hg38.chrUn_KI270746v1 39766 285 + 66486 ATTTGTGTAATTATACCTTCAGAAGTTTGTT----TAGAATTTACATGAT-TTAAAAACAATTATATGTGAGAGTAATTATTTTAAAATGCACATTTTAGGCTTGAAGTAGAAAATGCCATGATGAGAAAAACGATTAAAAA-ACAGTATGACCAAATTGAGCGGCTTGAGAAAATCCTGCAGCGTTCAAGTTTGGTAAGCTGATCTCTTAATTTCTGTCATACTGAAAACGAATTTTATTTTTCCAGTAGGAcgggttaaatatcccttgtccaaaatgcttgggaccaa s panPan2.chr2A 89848451 281 + 114371477 ATTTGTGTAATTATACCTTCAGAAGTTTGTT----TAGAATTTACATGAT-T---AAAAAATTATATGTGAGAGTAATTATTTTAAAATGCACATTTTAGGCTTGAAGTAGAAAATTCCATGATGAGAAAAACTATTAAAAA-ACAGGATGACCAAATTGAGCGGCTTGAGAAAATCCTGCAGCGTTCAAGTTTGGTAAGCCGATCTCTTAATTTCTGTCATACTGAAAAGGAATTTTA-TTTTCCAGTAGGAcgggttaaatatcccttgtccaaaatgcttgggaccaa i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864638 285 - 998796 ATTTGTGTAATTATACCTTCAGAAGTTTGTT----TAGAATTTACATGAT-TAAAAAAAAATTATGTGTGAGAGTAATTATTTTAAAATGCACATTTTAGGCTTGAAGTAGAAAATGCCATGATGAGAAAAACTATTAAAAA-ACAGGATGACCAAATTGAGCGGCTTGAGAAAATCCTGCAGTGTTCAAGTTTGGTAAGCTGATCTCTTAATTTCTGTCATACTGAAAAGGAATTTTATTTTTCCAGTAGGAcgggttaaatatcccttgtccaaaatgcttgggaccaa i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47860837 286 + 94967081 ATTTGTGTAATTATACCTTCAGAAGTTTGTT----TAGAATTTACATGAT-TTAAAAAAAATGATGTGTGAGAGTAATTATTTTAAAATGCACATTTTAGGCTTGAAGTAGAAAATGCCATGATGAGAAAAACTATTAAAAATACAGGATGACCAAATTGAGCGGCTTGAGAAAATCCTGCAGCATTTAAGTTTGGTAAGCTGATCTCTTAATTTCTGTCATACTGAAAAGGAATTTTATTTTTCCAGTAGGATGggttaaatatcctttgtccaaaatgcttgggaccaa i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108569921 285 + 108979918 ATTTGTGTAATTATACCTTCAGAAGTTTATG----TAGAGTTTACATGAT-GTTAAAAAATTTATGTGTGAGAGTAATTATTTTAAAATGCACATTTTAGGCTTGAAGTAGAAAATGCCATGATAAGAAAAACTATTAAAAA-ACAGGATGACCAAATTGAGCGGCTTGAGAAAATCCTGCAGCGTTCAAGTTTGGTAAGCCAATCTCTTAATTTCTGTCATACTGAAAAGGAATTTTATTTTTCCAGTAGGAcgggttaaatatcccttgtccaaaatgcttgggaccaa i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706658 285 + 111193037 ATTTGTGTAATTATACCTTCAGAAGTTTATG----TAGAGTTTACATGAT-GTTACAAAATTTATGTGTGAGAGTAATTATTTTAAAATGCACATTTTAGGCTTGAAGTAGAAAATGCCATGATAAGAAAAACTATTAAAAA-ACAGGATGACCAAATTGAGCGGCTTGAGAAAATCCTGCAGCGTTCAAGTTTGGTAAGCCAATCTCTTAATTTCTGTCATACTGAAAAGGAATTTTATTTTTCCAGTGGGAcgggttaaatatcccttgtccaaaatgcttgggaccaa i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10572473 285 - 11597128 ATTTGTGTAATTATACCTTCAGAAGTTTATG----TAGAGTTTACATGAT-GTTAAAAAATTTATGTGTGAGAGTAATTATTTTAAAATGCACATTTTAGGCTTGAAGTAGAAAATGCCATGATAAGAAAAACTATTAAAAA-ACAGGATGACCAAATTGAGCGGCTTGAGAAAATCCTGCAGCGTTCAAGTTTGGTAAGCCAATCTCTTAATTTCTGTCATACTGAAAAGGAATTTTATTTTTCCAGTAGGAcgggttaaatatcccttgtccaaaatgcttgggaccaa i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5061735 285 - 5626091 ATTTGTGTAATTATACCTTCAGAAGTTTATG----TAGAATTTACATGAT-GTTAAAAAATTTATGTGTGAGAGTAATTATTTTAAAATGCACATTTTAGGCTTGAAGTAGAAAATGCCATGATGAGAAAAACTATTAAAAA-ACAGGATGACCAAATTGAGCGGCTTGAGAAAATCCTGCAGCGTTCAAGTTTGGTAAGCCAATCTCTTAATTTCTGTCATACTGAAAAGGAATTTTATTTTTCCAGTAGGAcgggttaaatatcccttgtccaaaatgcttgggaccag i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535604 285 + 107702431 ATTTGTGTAATTATACCTTCAGAAGTTTATG----TAGAATTTACATGAT-GTTAAAAAATTTATGTGTGAGAGTAATTATTTTAAAATGCACATTTTAGGCTTGAAGTAGAAAATGCCATGATAAGAAAAACTATTAAAAA-GCAGGATGACGAAATTGAGCAGCTTGAGAAAATCCTGCAGCGTTCAAGTTTGGTAAGCCAATCTCTTAATTTCTGTCATACTGAAAAGGAATTTTATTTTTCCAGTAGGAcgggttaaatatcccttgtccaaaatacttgggaccaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 347733 285 - 409142 ATTTGTGTAATTATACCTTCAGAAGTTTATG----TAGAATTTACATGAT-GTTAAAAAATTTATGTGTGAGAGTAATTATTTTAAAATGCACATTTTAGGCTTCAAGTAGAAAATGTCATGATAAGAAAAACTATTAAAAA-ACAGGATGACCAAATTGAGCGGCTTGAGAAAATCCTGCAGCGTTCAAGTTTGGTAAGCCAATCTCTTAATTTCTGTCATACTGAAAAGGAATTTTATTTTTCCAGTAGGAcgggttaaatatcccttgtccaaaatgcttgggaccaa i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14839670 285 + 108792865 ATTTGTGTAGTTATACCTTCAGAAATTTGTT----TAGAATTCACATGAT-TTTAAAAGCATTGTGTGTGAGAGTAATTATTTTTAAATGCACATTTTAGGCTTGAAATAGAAAATTCCGTCAGAAGAAGTATAATTAAAAA-GCAAGACGACCAAATTGAGCAGCTTCAGAAAATCATGCAAAGTTCAACTTCGGTAAGCCAATCTCTTAATTTCTGTCATACTGAAAAGGAATTTCATTTTTCCAGTAGGAcaggctgaatatcccttgtccaaaatgcttgggaccag i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27278263 285 - 28799539 ATTTGTGTAATTATGCCTTCAGAAGTTTGTT----TAGAATTTACATGGT-GTTAAAAAATTTGTGTGTGAGAGTAATTATTTTAAAATGCACATTTTAGGCTTGAAATGGAAAATTCCGTGATAAGAAATATAATTAAAAA-CCAAGACGACCAAATTGAACAGCTTCAGAAAATCATGCAAAATTCAACTCTGGTAAGCTAATCTCTTAATTTCTCTCATATTGAAAAGGAATTTTATTTTTCTAGTGGGAcaggctgaatatcccttgtccaaaatgcttgagaccag i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 99932 285 - 3620821 ATTTGTGTAATTATACCTTCAGAAGTTTGTT----TAGAATTTACATGAT-GTTAAAAAATTTGTGTGTGACAGTAATTATTTTAAAATGCACATTTTAGGCTTGAAATAGAAAATTCCATGATAAGAAATATAATTAAAAA-CCAAGACGACCAAATTGAGCAGCTTCAGAAAATCATGCAGAATTCAACTTTGGTAAGCCAATCTCTTAATTTCTGTCATACTGAAAAGGAATTTTATTTTTCCAGTAGGAcaggctgaatatcccttgtccaaaatgcttgggaccag i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19678631 286 - 27850971 ATTTATGTAATTATACCTTCAGATATTTGTGCAGACAGACATTATATGTTATTTTTAAAATTTTTCTGTGAGAATAATTATTTTCAAATATACATTTTAGGCTTGAAAAAGAAAATTCCAAGTTAAAAGTTACAATCAAAAA-ACAAACGGACAAAATTGAGCAGCTTCAAAAAAACTTGTTAATTGCAAGTTCAGTAAGTCCATATTTTAATTTCTGTCATACTGAA----AATTTTATTTCTTTAGTAGTACAAGTTGGGTATCCCTTATATAAAATGTTTGCAACCAA i otoGar3.GL873538 I 243 I 16535 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11219080 973 + 13868332 I a score=373761.000000 s hg38.chrUn_KI270746v1 40051 56 + 66486 aagtagatttttttcagattttggaatatttgtatatacctaatgaaatatcttgg s panPan2.chr2A 89848732 56 + 114371477 aagtagatttttttcagattttggaatatttgtatatacctaatgaaatatcttgg i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864923 56 - 998796 aagtagatttttttcagattttggaatatttgtatatacctaatgaaatatcttgg i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47861123 56 + 94967081 aagtagatttttttcagattttggaatatttgtatatacctaatgaaatatcttgg i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108570206 56 + 108979918 aagtagatttttttcagattttggaatatttgtgtatacctaatgaaataccttgg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706943 56 + 111193037 aagtagatttttttcagattttggaatatttgtgtatacctaatgaaataccttgg i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10572758 56 - 11597128 aagtagatttttttcagattttggaatatttgtgtatacctaatgaaataccttgg i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062020 56 - 5626091 aagtagatttttttcagattttggaatatttgtgtatacctaatgaaataccttgg i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535889 56 + 107702431 aagtagatttttttcagattttggaatatttgtgtatacctaatgaaataccttgg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348018 56 - 409142 aagtagatttttttcagattttcgaatatttgtgtatacctaatgaaataccttgg i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14839955 54 + 108792865 aagcagattttttt--gactttggagtatttgcatatacctaatgaaatatcttgg i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27278548 56 - 28799539 aagcagatttttttcagactttggaatatttgcatatacctaatgaaatatcttgg i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 100217 56 - 3620821 aagcagatttttttcagactttggaatatttgcatatacctaatgaaatatcttgg i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11219080 973 + 13868332 I e otoGar3.GL873538 19678917 16535 - 27850971 I a score=931245.000000 s hg38.chrUn_KI270746v1 40107 125 + 66486 ggatggtacctgagtctaaacatgaaattcatttatgtttcatatataccttatgcacatagcctgaaggtaattctctacaatattttacagtaattttttgcaggtaacaaagtttttactgt s panPan2.chr2A 89848788 125 + 114371477 ggatggtacctgagtctaaacatgaaattcatttatgtttcatatataccttatgcacatagcctgaaggtaattctctacaatgttttacagtaattttttgcaggtaacaaagtttttactat i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 864979 125 - 998796 ggatggtacctgagtctaaacatgaagttcatttatgtttcatatataccttatgcacatagcctgaaggtaattctctacaatgttttacagtaattttttgcaggtaacaaagtttttactat i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47861179 125 + 94967081 ggatggtacctgagtctaaacatgaaattcatttatgtttcatatataccttatgcacatagcctgaaggtaattctctacaatgttttacagtaattttttgcagataacaaagtttttactgt i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108570262 125 + 108979918 gggtggtacctgagtctaaacatgaaattcgtttatgtttcatatataagttatgcacatagcctgaaggtaatcctctatgatgttctacagtaattttttgcaggtaacaaagtttttactgt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17706999 125 + 111193037 gggtggtacctgagtctaaacatgaaattcgtttatgtttcatatataagttatgcacatagcctgaaggtaatcctctatgatgttctacagtaattttttgcaggtaacaaagtttttactgt i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10572814 125 - 11597128 gggtggtacctgagtctaaacatgaaattcgtttatgtttcatatataagttatgcacatagcctgaaggtaatcctctatgatgttctacagtaattttttgcaggtaacaaagtttttactgt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062076 125 - 5626091 gggtggtacctgagtctaaacatgaaattcgtttatgtttcatatataagttatgcacatagcctgaaggtaatcctctatgatgttctacagtaattttttgcaggtaacaaagtttttactgt i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16535945 125 + 107702431 gggtggtacctgagtctaaacatgaaatttgtttatgtttcatatataagttatgcacatagcctgaaggtaatcctctatgatgttctacagtaattttttgcaggtaacaaagtttttactgt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348074 125 - 409142 gggtggtacctgagtctaaacatgaaattcgtttatgtttcatatataagttatgcacataggctgaaggtaatcctctatgatgttctacagtaattttttgcaggtaacaaagtttttactgt i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14840009 84 + 108792865 ggatggtacctgaacctaaacatgaaattcacttatgttt--------------------------------------tacaat-ttttacagtaattttttgcaggcaac--agtttttactgt i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27278604 123 - 28799539 ggatggtacctgaacctaaacatgaaattcacttatgtttcttatacaacttatacacatagccagaaggtaattctctacaatgttttacagaaattttttgcaggtaac--agtttttactgt i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 100273 123 - 3620821 ggatggtacctgaacctaaacatgaaattcacttatgtttcttatacaacttatacacatagccggaaggtaattctctacaatgttttacagtaattttttgcaggtaat--agtttttactgt i cebCap1.NW_016107537v1 C 0 C 0 s eulMac1.LGHX01005755v1 47536 120 - 332152 ggatggga-ctaagtctaaacacaaaat----ttatgttttgtatataccttatgcacatagcctgaaggtaattttatacaatgttctgcaataattttatgcatgaaacaaagtttttactgt i eulMac1.LGHX01005755v1 N 0 N 0 s eulFla1.LGHW01005849v1 48364 120 - 337715 ggatggga-ctaagtctaaacacaaaat----ttatgttttgtatataccttatgcacatagcctgaaggtaattttatacaatgttctgcaataattttatgcatgaaacaaagtttttactgt i eulFla1.LGHW01005849v1 N 0 N 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11219080 973 + 13868332 I e otoGar3.GL873538 19678917 16535 - 27850971 I a score=1083508.000000 s hg38.chrUn_KI270746v1 40232 169 + 66486 tttccccagagcctgtcacatgaggtcaggtgtggaacattgcagttgtggtgtcatgtccgtgctcaaaaagtttcaggttgtagagca-ttttgga-tttcaga-tttatagtttagggatgatcaatctACAGTACAGAAGCTCCTTGACTTGCAGTGGGTTTACATGA s panPan2.chr2A 89848913 172 + 114371477 tttcaccagagcctgtcacatgaggtcaggtgtggaacgttgcagctgtggtgtcatgtccgtgctcaaaaagtttcagattgtagagcatttttggattttcagattttctagattagggatgatcaatctACAGTAcagatgctccttgacttacagtgggtttacatga i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865104 169 - 998796 tttcaccagagcctgtcacatgaggtcaggtgtggaacgttgcagctgtggtgtcatgtccgttctcaaaaagtttcagattgtagagca-ttttgga-tttcaga-tttttagattagggatgatcaatctACAGTACAGATGCTCCTTGACTTACAGTGGGCTTACATGA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47861304 169 + 94967081 tttcaccagagcctgtcacatgaggtcaggtgtggaacgttgcagttgtggtgtcatgtccgtgctcaaaaagtttcagattgtagagca-ttttgga-tttcaga-tttttagattagggatgatcaatctACAGTACAGATGCTCCTTGACTTACAGTGGGTTTACATGA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108570387 169 + 108979918 tttcaccgcagcctgtcacatgaggtcaggtgtggaatgctgcagttgtggcgtcatgtccgtgctcagagagtttcagattgtagagca-ttttgga-tttcaga-tttttagattagggatgatcaatctACAGGACAGATGCTCCATGACTTACAGTGGGTTTACATGA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707124 169 + 111193037 tttcaccacagcctgtcacatgaggtcaggtgtggaatgctgcagttgtggcgtcatgtccgtgctcagagagtttcagattgtagagca-ttttgga-tttcaga-tttttagattagggatgatcaatctACAGGACAGATGCTCCATGACTTACAGTGGGTTTACATGA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10572939 169 - 11597128 tttcaccgcagcctgtcacatgaggtcaggtgtggaatgctgcagttgtggcgtcatgtccgtgctcagagagtttcagattgtagagca-ttttgga-tttcaga-tttttagattagggatgatcaatctACAGGACAGATGCTCCATGACTTACAGTGGGTTTACATGA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062201 169 - 5626091 tttcactgcagcctgtcacatgaggtcaggtgtggaatgctgcagttgtggcgtcatgtccgtgctcagagagtttcagattgtagagca-ttttgga-tttcaga-tttttagattagggatgatcaatctACAGGACAGATGCTCCATGACTTACAGTGGGTTTACATGA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536070 169 + 107702431 tttcacctcagcctgtcacatgaggtcaggtgtggaacgctgcagttgtggcatcatgtccgtgctcagagagtttcagattgtagagca-ttttgga-tttcaga-tttttagattaggggtgatcaatctACAGGACAGATGCTCCATGACTTACAGTGGGTTTACATGA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348199 169 - 409142 tttcaccgcagcctgtcacatgaggtcaggtgtggaatgctgcagttgtggcgtcatgtccgtgctcagagagtttcagattgtagagca-ttttgga-tttcaga-tttttagattagggatgatcaatctACAGGACAGATGCTCCATGACTTACAGTGGGTTTACATGA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14840093 167 + 108792865 tttcaccgcagcctgt--catgaggtaaggtgtggaatgttgcagttgtggtgtcatgtctatgctcaaaaagtttcagattttagagca-ttttgaa-tttcaga-tttttagattaggaatgatcaatctACAGTAcagatgctccttgacttacaatgggtttacatGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27278727 167 - 28799539 tttcactgcagcctgt--catgaggtaaggtgtggaatgttgcagttgtggtgtcatgtctatgctcaaaaagtttcagattttagagca-ttttgaa-tttcaga-tttttagattaggaatgatcaatctACAGTACAGATGCTCCTTGACTTACAACGGGTTTACATGG i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 100396 167 - 3620821 tttcactgcagcctgt--catgaggtaaggtgtggaatgttgcagttgtggtgtcatgtctatgctcaaaaagtttcagattttagagca-ttttgaa-tttcaga-tttttagattaggaatgatcaatctACAGTACAGATGCTCCTTGACTTACAACAGGTTTCCATGG i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11219080 973 + 13868332 I e otoGar3.GL873538 19678917 16535 - 27850971 I a score=760319.000000 s hg38.chrUn_KI270746v1 40401 113 + 66486 TAATGTCTCTTGTTTGACTGAAACTTTATAAGTAATATTTGATTTATTTCAGATGCTGCCAGGTGTT-CA---------------AGAGCTAGATGAAGGTATGTTGCCAAAATTTATGAATTAAATTC s panPan2.chr2A 89849085 112 + 114371477 taaTGTCTCTTGTTTGACTGAAACATTATAAGTAATATTTGCTTTATTTCAGATGCCA-CAGGTGTT-CA---------------AGAGCTAGATGAAGGTATGTTGCCAAAATTTATGAATTAAATTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865273 112 - 998796 TAATGTCTCTTGTTTGACTGAAACATTATAAGTAATATTTGCTTTATTTCAGATGCCA-CAGGTGTT-CA---------------AGAGCTAGATGAAGGTATGTTGCCAAAATTTATGAATTAAATTC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47861473 112 + 94967081 TAATGTCTCTTGTTTGACTGAAACATTATAAGTAATATTGAATTTATTTCAGATGCGG-CAGGTGTT-CA---------------AGAGCTAGATGAAGGTATGTTGCCAAAATTTATGAATTAAATTC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108570556 111 + 108979918 TAATGTCCCTTGTTTGACTGAAACATTATAAGTAATATTTGATTTATTTCAGATGCTG-CCTGTGTT-CA---------------GGAAGTAG-TGAAGGTATGTTGCCAAAATTTATGAATTAAATTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707293 111 + 111193037 TAATGTCCCTTGTTTGACTGAAACATTATAAGTAATATTTGATTTATTTCAGATGCTG-CCTGTGTT-CA---------------GGAAGTAG-TGAAGGTATGTTGCCAAAATTTATGAATTAAATTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573108 111 - 11597128 TAATGTCCCTTGTTTGACTGAAACATTATAAGTAATATTTGATTTATTTCAGATGCTG-CCTGTGTT-CA---------------GGAAGTAG-TGAAGGTATGTTGCCAAAATTTATGAATTAAATTC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062370 112 - 5626091 TAATGTCCCTTGTTTGACTGAAACATTATAAGTAATATTTGATTTATTTCAGATGCTG-CCTGTGTT-CA---------------GGAAGTAGATGAAGGTATGTTGCCAAAATTTATGAATTAAATTC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536239 112 + 107702431 TAATGTCCCTTGTTTGACTGAAACATTATAAGTAATATTTGATTTATTTCAGATGCAG-CCTGTGTT-CA---------------GGAAGTAGATGAAGGTATGTTGCCAAAATTTATGAATTAAATTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348368 112 - 409142 TAATGTCCCTTGTTTGACTGAAACATTATAAGTAATATTTGATTTATTTCAGATGCTG-CCTGTGTT-CA---------------GGAAGTAGATGAAGGTATGTTGCCAAAATTTATGAATTAAATTC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14840260 128 + 108792865 TAATGTCTTTTGTTTGGCTGAAACATTATGAGTAATATTTGATTTATTTCAGGTGAAA-CAGGTGTTGCACGAAATCGAAACTACAGAAATAGATGAAGGTATGTTGCCAAAATTTATGAATTAAATTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27278894 128 - 28799539 TAATGTCTTTTGTTTGACTGAAACATTATAAGTAATATTTGATTTATTTCAGAGGCAA-CAGGTGTTGCAAGAAAATGAAACTACAGAAGTAGATGAAGGTATGTTGCCAGAATTTATGAATTAAATTC i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 100563 128 - 3620821 TAATGTCTTTTGTTTGACTGAAACATTATAAGTAATATTTGATTTATTTCAGAGGCAA-CAGGTGTTGCAAGAAAATGAAACGACAGAAGTAGATGAAGGTATGTTGCCAAAATTTATGAATTAAATTC i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19695452 128 - 27850971 TAATGTCTTCTGTTTAACTTAAACATTATAAATAATATCTGACTTATTTCAGATGCAG-CAGGAGTTGGAAAAAAACATAACTAGAGAACTAGAAGAAGGTATGTTGCCAAAATATATGACTTAAATTT i otoGar3.GL873538 I 16535 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11219080 973 + 13868332 I a score=25502.000000 s hg38.chrUn_KI270746v1 40514 3 + 66486 AAA s panPan2.chr2A 89849197 3 + 114371477 AAA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865385 3 - 998796 AAA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47861585 3 + 94967081 AAA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108570667 3 + 108979918 AAA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707404 3 + 111193037 AAA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573219 3 - 11597128 AAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062482 3 - 5626091 AAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536351 3 + 107702431 AAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348480 3 - 409142 AAA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14840388 3 + 108792865 AAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27279022 3 - 28799539 AAA i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 100691 3 - 3620821 AAA i cebCap1.NW_016107537v1 C 0 C 0 s eulFla1.LGHW01006382v1 65747 3 + 278168 AGA i eulFla1.LGHW01006382v1 N 0 N 0 s otoGar3.GL873538 19695580 3 - 27850971 AGA i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11219080 973 + 13868332 I a score=696375.000000 s hg38.chrUn_KI270746v1 40517 124 + 66486 -TCATTGATTTCTGAAATAAACTGTAAGTAGTGAATGGTATTCCTCTCAATTGCTTGGTTAATACATGCTACATTAAATATTTTTTCTTACACACATCTAGTGAAAGATGTGAAAACATAATCAT s panPan2.chr2A 89849200 120 + 114371477 -TCATTGATTTCTGCAATAAACT----CTAGTGAACGGTATTCCTCTCAATTGCTTGGTTAATAAATGCTACATTAAATATTTTTTCTTACACACATCTAGTGAAAGATGTGAAAACATAAACAT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865388 122 - 998796 -TCATTGATTTCTGCAGTAAACTCTAAGTAGTGAACGGTATTCCTCTCAATTGTTTGGTTAATAAATGCTACATTAAATATTTTTTCTTACACACATCTAGTGAAAGATGTGAAAAC--AAACAT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47861588 120 + 94967081 -TCATTGATTTCTGAAATAAACTCTAAATAGTGAACGGTATTCCTCTCAATTGCTTGGTTAATAAATGCTACATTAAATATTTTTTCTT----ACATCTAGTGAAAGATGTGAAAACATAAACAT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108570670 110 + 108979918 -TCATTGATTTCTGAAATAAAC--------------GGTATTCCTCTCAATTGCTTGGTTAATAAATGCTACATTAAATATTTTTTCTTACACATATCCAGTGAAAGATGTGAAAACATAAACAT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707407 110 + 111193037 -TCATTGATTTCTGAAATAAAC--------------GGTATTCCTCTCAATTGCTTGGTTAATAAATGCTACATTAAATATTTTTTCTTACACATATCCAGTGAAAGAGGTGAAAACATAAACAT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573222 110 - 11597128 -TCACTGATTTCTGAAATAAAC--------------GGTATTCCTCTCAATTGCTTGGTTAATAAATGCTACATTAAATATTTTTTCTTACACATATCCAGTGAAAGATGTGAAAACATAAACAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062485 110 - 5626091 -TCATTGATTTCTGAAATAAAC--------------GGTATTCCTCTCAATTGCTTGGTTAATAAATGCTACATTAAATATTTTTTCTTACACATATCCAGTGAAAGATGTGAAAACATAAACAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536354 108 + 107702431 -TCATTGATTTCTGAAATAAAC--------------GGTATTCCTCTCAATTGGTTGGTTAATAAATGCTACATTAAATATTTTTTCTTACACATATCCAGTGAAAGATGTGAAAAC--AAACAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348483 110 - 409142 -TCATTGATTTCTGAAATAAAC--------------GGTATTCCTCTCAATTGCTTGGTTAATAAATGCTACATTAAATATTTTTTCTTACACATATCCAGTGAAAGATGTGAAAACATAAACAT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14840391 119 + 108792865 -TCATTGGTTTCAGAAATAAACTGT-GGTAGTGCACTGTATTCCTCTCCATTGCTTAGTTAATAAAAACTGCATTAAATATTTTTTCTTATATCCATTTAGTGAAAAATGTGAAAACATAA---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27279025 120 - 28799539 -TCATTGATTTCTGAAATAAAATATAAGTAGTGTACTGTATTTCTCTCCATTGCTTGGTTAATAAAAATTGCATTAAATATTTTTTCTGATATCCATTTAGCGAAAAATGTGAAAACATAA---- i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 100694 124 - 3620821 -TCATTGATTTCTGAAATAAAATGTAAGTAGTGTACTGTATTCCTCTCCATTGCTTGGTTAGTAAAAACTACATTAAATATTTTTTCTTATATCCATTTAGTGAAAAATGTGAAAACATAATCAT i cebCap1.NW_016107537v1 C 0 I 28 s otoGar3.GL873538 19695583 109 - 27850971 TTAACTGATTTCTGAAATAAACAATAAATAGCAAATGGCATCCCTTTTTATTGTTTGGTAAATAGATACTATGTTAAATATTTTTTC----------------AGGGATGTGAAAACATAAACAT i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11219080 973 + 13868332 I a score=189247.000000 s hg38.chrUn_KI270746v1 40641 31 + 66486 TCATAGTGAAGAGTATACTTATGCTTTGTTA s panPan2.chr2A 89849320 31 + 114371477 TCATAGTGAAGAGTATACTTATGCTTTGTTA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865510 31 - 998796 TCATAGTGAAGAGTATACTTATGCTTTGTTA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47861708 31 + 94967081 TCATAGTGAAGAGTATACTTATGCTTTGTTA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108570780 31 + 108979918 TCACAGTGAAGAGTATACTTATGCCTTGTTA i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707517 31 + 111193037 TCACAGTGAAGAGTATACTTATGCCTTGTTA i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573332 31 - 11597128 TCACAGTGAAGAGTATACTTATGCCTTGTTA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062595 31 - 5626091 TCACAGTGAAGAGTATACTTATGCCTTATTA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536462 31 + 107702431 TCACAGTGAAGAGTATACTTATGCCTTGTTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348593 31 - 409142 TCACAGTGAAGAGTATACTTATGCCTTGTTA i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14840510 31 + 108792865 TCATAAGAAAGAGTATACTTGTGCCTTGCTA i calJac3.chr14 C 0 I 1 s saiBol1.JH378124 27279145 31 - 28799539 TCATAAGAGAGAGTATCCTTACACCTTGTTA i saiBol1.JH378124 C 0 I 1 s otoGar3.GL873538 19695692 31 - 27850971 TCATCATGAAGAGTATACTTATGCCTCATTA i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11219080 973 + 13868332 I e cebCap1.NW_016107537v1 100818 28 - 3620821 I a score=84000.000000 s hg38.chrUn_KI270746v1 40672 22 + 66486 CTTCATCATGTTCCATAGCTTT s panPan2.chr2A 89849351 22 + 114371477 ATTCATCATGTTCCATAGCTTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865541 22 - 998796 ATTCATCATGTTCCATAGCTTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47861739 22 + 94967081 ATTCATCATGTTCCATAGCTTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108570811 22 + 108979918 ATTCGTCATGTTCCATAGCTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707548 22 + 111193037 ATTCGTCATGTTCCATAGCTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573363 22 - 11597128 ATTCGTCATGTTCCATAGCTTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062626 22 - 5626091 ATTCGTCATGTTCCATAGCTTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536493 22 + 107702431 ATTCATCATGTTCCATAGCTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348624 22 - 409142 ATTCGTCATGTTCCATAGCTTT i manLeu1.NW_012101154v1 C 0 C 0 s otoGar3.GL873538 19695723 10 - 27850971 -----------ATCACAGTTT- i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11219080 973 + 13868332 I e cebCap1.NW_016107537v1 100818 28 - 3620821 I e saiBol1.JH378124 27279176 1 - 28799539 I e calJac3.chr14 14840541 1 + 108792865 I a score=273.000000 s hg38.chrUn_KI270746v1 40694 1 + 66486 A s ponAbe2.chr2a_random 11220053 1 + 13868332 A i ponAbe2.chr2a_random I 973 I 69 s otoGar3.GL873538 19695733 1 - 27850971 A i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e cebCap1.NW_016107537v1 100818 28 - 3620821 I e manLeu1.NW_012101154v1 348646 0 - 409142 C e chlSab2.chr14 16536515 0 + 107702431 C e cerAty1.NW_012001187v1 5062648 0 - 5626091 C e macNem1.NW_012014799v1 10573385 0 - 11597128 C e rheMac8.chr13 108570833 0 + 108979918 C e panPan2.chr2A 89849373 0 + 114371477 C e saiBol1.JH378124 27279176 1 - 28799539 I e calJac3.chr14 14840541 1 + 108792865 I e macFas5.chr13 17707570 0 + 111193037 C e nomLeu3.chr14 47861761 0 + 94967081 C e gorGor5.CYUI01015730v1 865563 0 - 998796 C a score=316585.000000 s hg38.chrUn_KI270746v1 40695 70 + 66486 AAAAAAATCACAAGAAGTCTGTGTATCTCTTTTTTTCTGGCCCTACACTTTT----CTTCTGCCACCCCTATAG s panPan2.chr2A 89849373 70 + 114371477 AAAAAAATTGCAAGAAGTCTGTGTATCCCCTTTTTTCTGGCCCTACACTTTT----CTTCTGCCACCCCTATAG i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865563 69 - 998796 -AAAAAATTGCAAGAAGTCTGTGTATCCCTTTTTTTCTGGCCCTACACTTTT----CTTCTGCCACCCCTATAG i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47861761 70 + 94967081 AAAAAAATCACAAGAAGTCTGTGTATCCCTTTTTTTCTGGCCCTCCACTGTT----CTTCTGCCACCCCTATAG i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108570833 70 + 108979918 AAAAAAATCGTGAGAAGTCTGTGTATCCCTTTTTTTCTGGCCCTACACTTTT----CTTCTGCCACCCCTATAG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707570 70 + 111193037 AAAAAAATCGTGAGAAGTCTGTGTATCCCTTTTTTTCTGGCCCTACACTTTT----CTTCTGCCACCCCTATAG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573385 70 - 11597128 AAAAAAATCGTGAGAAGTCTGTGTATCCCTTTTTTTCTGGCCCTACACTTTT----CTTCTGCCACCCCTATAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062648 70 - 5626091 AAAAAAATCGTGAGAAGTCTGTGTATCCCTTTTTTTCTGGCCCTACACTTTT----CTTCTGCCACCCCTATAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536515 70 + 107702431 AAAAAAATCGTGAGAAGTCTGTGTATCCCTTTTTTTCTGGCCCTACACTTTT----CTTCTGCCACCCCTATAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348646 70 - 409142 AAAAAAATCGTGAGAAGTCTGTGTATCCCTTTTTTTCTGGCCCTACACTTTT----CTTCTGCCACCCCTATAG i manLeu1.NW_012101154v1 C 0 C 0 s otoGar3.GL873538 19695734 74 - 27850971 AAAAGAATCTCAAAAAGTCTATGTATCTCTTTATTTCTGTCTCTATACTATCTTCACTCCTGCCATCGCTATGG i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e ponAbe2.chr2a_random 11220054 69 + 13868332 I e cebCap1.NW_016107537v1 100818 28 - 3620821 I e saiBol1.JH378124 27279176 1 - 28799539 I e calJac3.chr14 14840541 1 + 108792865 I a score=-55.000000 s hg38.chrUn_KI270746v1 40765 1 + 66486 -A s panPan2.chr2A 89849443 1 + 114371477 -A i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865632 1 - 998796 -A i gorGor5.CYUI01015730v1 C 0 C 0 s ponAbe2.chr2a_random 11220123 1 + 13868332 -A i ponAbe2.chr2a_random I 69 N 0 s nomLeu3.chr14 47861831 1 + 94967081 -A i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108570903 1 + 108979918 -A i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707640 1 + 111193037 -A i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573455 1 - 11597128 -A i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062718 1 - 5626091 -A i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536585 1 + 107702431 -A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348716 1 - 409142 -A i manLeu1.NW_012101154v1 C 0 C 0 s otoGar3.GL873538 19695808 1 - 27850971 T- i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e cebCap1.NW_016107537v1 100818 28 - 3620821 I e saiBol1.JH378124 27279176 1 - 28799539 I e calJac3.chr14 14840541 1 + 108792865 I a score=453001.000000 s hg38.chrUn_KI270746v1 40766 99 + 66486 ACTGTCAGCCTGCACACTGAAACTGTTCTCATAAAACAAAGGCATCATCAACTTCTCAAGG-TTAAGGTAGTGATTTAAGGCTAACAGACCCCACACTCA s panPan2.chr2A 89849444 99 + 114371477 ACTGTCAGCCTGCACACTGAAACTGTTCTCAGAAAACAAAGGCATCATCAACTTCTCAAGG-TTAAGGTAGTGATTTAAGGCTAACAGACCCCACACTCA i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865633 99 - 998796 ACTGTCAGCCTGCACACTGAAACTGTTCTCAGAAAACAAAGGCATCATCAACTTCTCAAGG-TTAAGGTAGTGATTTAAGGCTAACAGACCCCACACTCA i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47861832 99 + 94967081 ACTGTCAGCCTGCACACTGAAACTGTTCTCAGAAAACAAAGGCATCATCAACTTCTCAAGG-TTAAGGTAGTGATTTAAGGCTAACAGACCCCACACTCA i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108570904 100 + 108979918 ACTGTCAGCCTGCACACTGAAACTGTTCTCAGAAAACAAAGGCATCATCAACTTCTCAAGGTTTAAGGTAGTGATTTAAGGCGAACAGACCCCACACTCG i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707641 100 + 111193037 ACTGTCAGCCTGCACACTGAAACTGTTCTCAGAAAACAAAGGCATCATCAACTTCTCAAGGTTTAAGGTAGTGATTTAAGGCGAACAGACCCCACACTCG i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573456 100 - 11597128 ACTGTCAGCCTGCACACTGAAACTGTTCTCAGAAAACAAAGGCATCATCAACTTCTCAAGGTTTAAGGTAGTGATTTAAGGCGAACAGACCCCACACTCG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062719 100 - 5626091 ACTGTCAGCCTGCTCACTGAAACTGTTCTCAGAAAACAAAGGCATCATCAACTTCTCAAGGTTTAAGGTAGTGATTTAAGGCAAACAGACCCCACACTCG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536586 100 + 107702431 ACTGTCAGCCTGCACACTGAAACTGTTCTCAGAAAACAAAGGCATCATCAACTTCTCAAGGTTTAAGGTAGTGATTTAAGGCAAACAGACCCCACACTTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348717 100 - 409142 ACTGTCAGCCTGCTCACTGAAACTGTTCTCAGAAAACAAAGGCATCATCAACTTCTCAAGGTTTAAGGTAGTGATTTAAGGCAAACAGACCCCACACTCG i manLeu1.NW_012101154v1 C 0 C 0 s otoGar3.GL873538 19695809 96 - 27850971 ACTGTCAGACAGCACACCAAAACCGTTCTCAGAAAACAAAG---CCATCAACTTCTCAGGT-TTAGAGCAGTGATTTAAAGCCAGGAGACTCCAGACTTA i otoGar3.GL873538 C 0 I 102 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e cebCap1.NW_016107537v1 100818 28 - 3620821 I e saiBol1.JH378124 27279176 1 - 28799539 I e calJac3.chr14 14840541 1 + 108792865 I a score=411204.000000 s hg38.chrUn_KI270746v1 40865 101 + 66486 -----------------------------TGTGAT---------------AATAATTGGTTAAGCAATTACAGGTCACAAGCAGTCACTTGACCAGTGACATTTTAAATCTCTAG----TCATTGACTTTGTCATTGGTTTACTTTTGC s panPan2.chr2A 89849543 100 + 114371477 -----------------------------TGTGAT---------------AATAATTAGTTAAGCAATTACAGGTCACAAGCAGTCACTTGTCCAGTGACATTTTAAATCTCTAG----TCA-TGACTTTGTCATTGGTTTACTTTTGC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865732 100 - 998796 -----------------------------TGTGAT---------------AATAATTAGTTAAGCAATTACAGGTCACAAGCAGTCACTTGTCCAGTGACATTTTAAATCTCTAG----TCA-TGACTTTGTCATTGGTTTACTTTTGC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47861931 101 + 94967081 -----------------------------TGTGAT---------------AATAATTAGTTAAGCAACTACAGGTCACAAGCAGTCACTTGACCAGTGACATTTTAAATCTCTAG----TCATTGACTTTGTCATTGGTTTACTTTTGC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108571004 100 + 108979918 -----------------------------T-TGAT---------------AATAATTAGTTAAGCAATTACAGGTCACAAGCAGTCACTTGACCAGTGACATTTTAAATCTCCAG----TCATTGACCTTGTTATTGGTTTACTTTTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707741 100 + 111193037 -----------------------------T-TGAT---------------AATAATTAGTTAAGCAATTACAGGTCACAAGCAGTCACTTGACCAGTGACATTTTAAATCTCCAG----TCATTGACCTTGTTATTGGTTTACTTTTGC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573556 100 - 11597128 -----------------------------T-TGAT---------------AATAATTAGTTAAGCAATTACAGGTCACAAGCAGTCACTTGACCAGTGACATTTTAAATCTCCAG----TCATTGACCTTGTTATTGGTTTACTTTTGC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062819 104 - 5626091 -----------------------------T-TGAT---------------AATAATTAGTTAAGCAATTACAGGTCACAAGCAGTCACTTGACCAGTGACATTTTAAATCTCCAGTCATTCATTGACTTTGTTATTGGTTTACTTTTGC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536686 100 + 107702431 -----------------------------T-TGAT---------------AATAATTAGTTAAGCAATTACAGGTCACAAGCAGTCACTTGACCAGTGACATTTTAGATCTCCAG----TCATTGACTTTGTTATTGGTTTACTTTTGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348817 100 - 409142 -----------------------------T-TGAT---------------AATAATTAGTTAAGCAATTACAGGTCACAAGCAGTCACTTGACCAGTGACATTTTAAATCTCCAG----TCATTGACTTTGTTATTGGTTTACTTTTGC i manLeu1.NW_012101154v1 C 0 C 0 s otoGar3.GL873538 19696007 137 - 27850971 tgtcacgacagtaggcctagatcctcatat-tgaccatctctgtacgttgactggtttgtta--caatTACAGCTGATAAGCTGTCACTTGACAAAAGACATTTTAAATCTCCAG----TT-----CTTTATCTTTGCTTTACTTTTGC i otoGar3.GL873538 I 102 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e cebCap1.NW_016107537v1 100818 28 - 3620821 I e saiBol1.JH378124 27279176 1 - 28799539 I e calJac3.chr14 14840541 1 + 108792865 I a score=227734.000000 s hg38.chrUn_KI270746v1 40966 43 + 66486 ACCTGGGAAAAGTTGAAAATTCCTTAGCATGGAATCAAAACTC s panPan2.chr2A 89849643 43 + 114371477 CCCTGGGAAAAGTTGAAAATTCCTTAGCATGGAATCAAAACTC i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865832 43 - 998796 CCCTGGGAAAAGTTGAAAATTCCTTAGCATGGAATCAAAACTC i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47862032 43 + 94967081 CCCTGGGAAAAGTTGAAAATTCCTTAGCATGGAATCAAAACTC i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108571104 43 + 108979918 CCCTGGGAAAAGTTGAAAATTCCTTAGCATGGAATCAAACCTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707841 43 + 111193037 CCCTGGGAAAAGTTGAAAATTCCTTAGCATGGAATCAAAACTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573656 43 - 11597128 CCCTGGGAAAAGTTGAAAATTCCTTAGCATGGAATCAAAACTC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062923 43 - 5626091 CCCTGGGAAAAGTTGAAAATTCCTTAGCATGGAATCAAAACTC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536786 43 + 107702431 CCCTGGGAAAAGTTGAAAATTCCTTAGCATGGAATCAAAACTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348917 43 - 409142 CCCTGGGAAAAGTTGAAAATTCCTTAGCATGGAATCAAAACTC i manLeu1.NW_012101154v1 C 0 C 0 s eulMac1.LGHX01010766v1 11913 43 - 21805 CCTCAGAAAAAGTTGCATATTCCTTGGCATGGAATGAAAACTC i eulMac1.LGHX01010766v1 N 0 I 452 s otoGar3.GL873538 19696144 43 - 27850971 CCTCAGGACAAGTTTCAAATTCCTTATTGTGGAATAAAAACAG i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e cebCap1.NW_016107537v1 100818 28 - 3620821 I e saiBol1.JH378124 27279176 1 - 28799539 I e calJac3.chr14 14840541 1 + 108792865 I a score=180764.000000 s hg38.chrUn_KI270746v1 41009 45 + 66486 TCACATCAGTGtggttcttgtcaggttattcagccttatctttcg s panPan2.chr2A 89849686 45 + 114371477 TCACATCAGTGTGGTACTTGTCAGATTAttcagccttctctttca i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865875 45 - 998796 TCACATCAGTGtggttcttgtcaggttattcagccttctctttcg i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47862075 45 + 94967081 TCACATCAGTGTGGTTCTTATCAGGTTAttcagccttatctttca i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108571147 45 + 108979918 CCACATCAGTGtggttcttgtcaagttattcagccttatctttca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707884 45 + 111193037 CCACATCAGTGtggttcttgtcaagttattcagccttatctttca i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573699 45 - 11597128 CCACATCAGTGtggttcttgtcaagttattcagccttatctttca i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5062966 45 - 5626091 CCACATCAGTGtggttcttgtcaagttattcagccttatatttca i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536829 45 + 107702431 CCACATCAGTGtggttcttgtcaagttattcagccttatctttca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 348960 45 - 409142 CCACATCAGTGtggttcttgtcaagttattcagccttatatttca i manLeu1.NW_012101154v1 C 0 C 0 s otoGar3.GL873538 19696187 32 - 27850971 CCAAGTcaatttggttcttgtcaagtcttttg------------- i otoGar3.GL873538 C 0 C 0 e eulMac1.LGHX01010766v1 11956 452 - 21805 I e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I e cebCap1.NW_016107537v1 100818 28 - 3620821 I e saiBol1.JH378124 27279176 1 - 28799539 I e calJac3.chr14 14840541 1 + 108792865 I a score=3347124.000000 s hg38.chrUn_KI270746v1 41054 488 + 66486 ccacttaccatactctgcacctttgttctagcatccagccaaactagactacacggagctccacagtgatcatcctcacctccacctctttgcatttacttcttccctctatcctacatgtgttttccttccccttcagatatcaacctatgaattgcctctatcaaaaagcctacaatattgacacaaacctgggctagtatcccttctatgtcttccagtaa-gtggtgtcttatgcctgtcattgtatgtatgactctgtatgggaattgcctgtttg-----ttttttcggatta-tagcatacagttgttga-ggggtgcaccgtatcatctttatcttgttaatccagtgcttgtcctagtaccttagcacatggttgctgaatacatgaatGAAGAGTGAGAAAC-CAGAAGCTCTGATACTTAACTGCCATGATAATGAAATCAGTGTGCAACTATGGGCAAATTATATTTAATAGTAATTGCATATTG---------- s panPan2.chr2A 89849731 488 + 114371477 ccacttaccatactctgcacctttgttctatcatccagccaaactagactacatggagctccacagtgatcgtcttcacctccagctctttgcattttcttcttccctctatcctacatgtgttttccttccctttcagatatcaacctatgaattgcctctaccaaaaagcctacaatattgacacaaacctaggctagtatcccttctatgtcttccaataa-gtgctgtcttatgcctgtcattgtatgtatgactctgtatgggaattgcctgtttg-----ttttttcagatta-tagcatacagttgttga-ggggtggaccatatcatctttatcttgtaattccagtgcttgtcctagtaccttagcacatggttgctgaatacatgaatGAAGAGTGAGAAAC-CAGAAGCTCTGATATTTAACTGCTGTGATAATGAATTCAGTGTGCAACTATGGGCAAATTATATTTAATAGTAATTGCATATTG---------- i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 865920 488 - 998796 ccacttaccatactctgcacctttgttctatcatccagccaaactagactacatggagctccacagtgatcgtcttcacctccagctctttgcatttacttcttccctctatcctacatgtgttttccttccctttcagatatcaacctatgaattgcctctaccaaaaagcctacaatattggcacaaacctgggctagtatcccttctatgtcttccaataa-gtgctgtcttgtgcctgtcattgtatgtatgactctgtatgggaattgcctgtttg-----ttttttcagatta-tagcatacagttgttga-ggggtggaccatatcatctttatcttgtaattccagtgcttgtcctagtaacttagcacatggttgctgaatacgtgaatGAAGAGTGAGAAAC-CAGAAGCTCTGATATTTAACTGCCGTGATAATGAATTCAGTGTGCAACTATGAGCAAATTATATTTAATAGTAATTGCATATTT---------- i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47862120 486 + 94967081 ccacttaccatactctgcccctttgttctagcatccagccaaactagactacatggagctccacagtgatcgtcttcacctccagctctttgcatttacttcttccctctatcctacgtgtgttttccttccccttcagatatcaacctatgaattgcctctaccaaaaagcctacaatattgacacaaacctgagctagtatcccttctatgtcttccaataa-gtgctgtcttatgcctgtcattgtatgtatgactctgtatgggaattgcctctttg-----ttttttcagattattagcgtacagttgttgagggggtggactgt---atctttatcttgtta-tccagtgcttgtcatagtaccttagcacatggttgctgaatacatgaatGAAGAGTGAGAAAC-CAGAAGCTCTGATACTTAACTGCCATGATAATGAATTCAGTGTGCAACTATGGGCAAATTATATTTAATAGTAATTGCATATTG---------- i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108571192 489 + 108979918 ccacttaccacactctgcccctttgttctagcatccagccaaactaaactacatggagttccacagtgatcatcctcacctccagctctttgcatttacttcttccctctattctccatgtgttttccttctccttcagatattaacctatgaattgcctccaccaaaaagcctacaatattgacacaaacctgggctagtatcccttctgtgttttccagtaa-gtgctgtcttatgcctgtcattgtatgtatgactctgtatgggaattgcctgtttg-----ttttttcagatta-tagcatacagttgttga-ggggtggaccgtatcatctttatcttgtaattccagtgcttgtcctagtaccttagcacatggttgctgaatacacaaatGAAGAGTGAGAAATGCAGAAGCTCTGATACTTAACTGCCATGATAATGAATTCAGTGTGCAACTATGGGCAAATTACATTTAATAGTAATTGCATATTG---------- i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17707929 489 + 111193037 ccacttaccacactctgcccctttgttctagcatccagccaaactaaactacatggagttccacagtgatcatcctcacctccagctctttgcatttacttcttccttctattctccatgtgttttccttctccttcagatattaacctatgaattgcctccaccaaaaagcctacaatattgacacaaacctgggctagtatcccttctgtgttttccagtaa-gtgctgtcttatgcctgtcattgtatgtatgactctgtatgggaattgcctgtttg-----ttttttcagatta-tagcatacagttgttga-ggggtggaccgtatcatctttatcttgtaattccagtgcttgtcctagtaccttagcacatggttgctgaatacacaaatGAAGAGTGAGAAATGCAGAAGCTCTGATACTTAACTGCCATGATAATGAATTCAGTGTGCAACTATGGGCAAATTACATTTAATAGTAATTGCATATTG---------- i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10573744 489 - 11597128 ccacttaccacactctgcccctttgttctagcatccagccaaactaaactacatggagttccacagtgatcatcctcacctccagctctttgcatttacttcttccctctattctccatgtgttttccttctccttcagatattaacctatgaattgcctccaccaaaaagcctacaatattgacacaaacctgggctagtatcccttctgtgttttccagtaa-gtgctgtcttatgcctgtcattgtatgtatgactctgtatgggaattgcctgtttg-----ttttttcagatta-tagcatacagttgttga-ggggtggaccgtatcatctttatcttgtaattccagtgcttgtcctagtaccttagcacatggttgctgaatacacaaatGAAGAGTGAGAAATGCAGAAGCTCTGATACTTAACTGCCATGCTAATGAATTCAGTGTGCAACTATGGGCAAATTACATTTAATAGTAATTGCATATTG---------- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5063011 489 - 5626091 ccagttaccacactctgcccctttgttctagcatccagccaaactagactacatggagtttcacagtgatcatcctcacctccagctctttgcatttacttcttccctctattctccatgtgttttccttctccttcagatattaacctatgaattgtctccaccaaaaagcctacaatactgacacaaacctgggctagtatcccttctgtgttttccagtaa-gtgctgtcttatgcctgtcattgtatgtatgactctgtatgggaattgcctgtttg-----ttttttcagatta-tagcatacagttgttga-ggggtggaccgtatcatctttatcttataattccagtgcttgtcctagtaccttagcacatggttgctgaatacacaaatGAAGAGTGAGAAATGCAGAAGCTCTGATACTTAACTACCATGATAATGAATTCAGTGTGCAACTATGGGCAAATTACATTTAATAGTAATTGCATATTG---------- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16536874 486 + 107702431 ccacttaccacgctctgcccctttgttctagcatccagccaaactagacaacatggagttccacagtgatcatcctcacctccagctctttgtatttacttcttccctctattctccatgtgttttccttctccttcagatattaacctatgaattgcctccaccaaaaagcctacaatattgacacaaacctgggcttgtatcccttctgtgtcttcccgtaa-gtgctgtcttatgcctgtcattgtatgtatgactctgtatgggaattgcctgtttg-----ttttttcagatta-tagcatacagttgttga-ggggtggaccgtatcgtctttatcttgtaattccagtgcttgtcctagtaccttagcacatggttgctgaatacacaaatGAAGAGTGAGAAATGC---AGCTCTGATACTTAACTGCCATGATAATGAATTCAGTGTGCAACTATGGGCAAATTACATTTAATAGTAATTGCATATTG---------- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 349005 489 - 409142 ccacttaccacactctgcccctttgttctagcatccagccaaactagactacatggagttccacagtgatcatcctcacctccagctctttgcatttacttcttccctctattctccatgtgttttccttctccttcagatatcaacctatgaattgcctccaccaaaaagcctacaatattgacacaaacctgggctagtatcccttctgtgttttccagtaa-gtgctgtcttatgcctgtcattgtatgtatgactctgtatgggaattgcctgtttg-----ttttttcagatta-tagcatacagttgttga-ggggtggaccgtatcatctttatcttataattccagtgcttgtcctagtaccttagcacatggttgctgaatacacaaatGAAGAGTGAGAAATGCAGAAGCTCTGATACTTAACTGCCATGATAATGAATTCAGTGTGCAACTATGGGCAAATTACATTTAATAGTAATTGCATATTG---------- i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14840542 477 + 108792865 ccactcaccatactctgccactttgttctagcatccagccacactagactacatggagctccacagtgatcatcctcatctccagctctttgcatttacttcttccctttatcccacatg--ttttctttatccttcagttatcaacctatgaatcacctctaccaaaaagcctacaatattgacacaaacctgggctagtatcccttctgtgtcttctgataa-----------atgcctgtcattgtatctatggctctctatgggaattgcctgtttg-----ttttttcagatta-tagggtacagttgttga-ggggtggactgtatcatcttcatcttgtaattccattgcttgtcctagtacctcagcacatggttgctaaatacatgaatGAAGAGTGAGAAAACCAGAAGCTCTGATACTTAACTACCATGATAAGGAATTCAGGGTGCAACTATGGGCAAATTATATTTAATAGTAATTGTATATTG---------- i calJac3.chr14 I 1 C 0 s saiBol1.JH378124 27279177 479 - 28799539 ccactcaccatactcggcccctttgttctaccatccagccacactagacttcatggagctccacagtgatcatcctcatctccagctctttgcatttacttcttccctctatcctacgtgtattttctttatccttcagttatcaacctatgaatcacctccatcaaaaagcctacaatattgacacaaacctgggctagtatcccttctgtgtcttctgataa-----------atgcctgtcattgtatctgtgactctcaatgggaattgcctgttta-----ttttttcagatta-tagcatatagttgttga-ggggtggactgaatcatcttcatcttgtaattctagtgctcgtcctagtacctctgcacatggttgctaaatacatgaatGAGGAGTATGAAAATGAGAATCTCTGATACTTAACTACCATGTTAAGGAATTCAGTGTGCAACTATGGGCAAATTATATTTAAGAGTAATTGCATATTG---------- i saiBol1.JH378124 I 1 C 0 s cebCap1.NW_016107537v1 100846 468 - 3620821 ccactcaccatactctgcccctttgttctagcatccagccacactagactacatggagctccacagtgattgtcctcatctgcagctctttgcatttacttcttccctctatcctatgtgtattttctttatccttcagttatcaacctatgaatcacctccac-----------caatattgacacaaacctgggctggtatctcttctgtgtcttctgataa-----------atgcctgtcattgtttctatgactctctatgggaattgcctgtttg-----ttttttcagatta-tagcaaacagttgttga-ggggtagactgtatcatcttcatcttgtaattccagtgcttgtcctagtacctcagcacatggttgctaaatacatgaatGAAGAGTGAAAAAACGAGAACCTCTGATACTTAGCTACCATGATAAGGAATTCAGTGTGCAACTATCAGCAAATTATATTTAAGAGTAATTGCATATTG---------- i cebCap1.NW_016107537v1 I 28 C 0 s otoGar3.GL873538 19696219 491 - 27850971 ccctttcctggactctggccctttgttttagtgtcactctaaactagacccctcagaatcc--cagtg-tcttccttgcctccagctctttgcatttgcttcttttctgta----ccatactttttccttgtcc-tcaggtatcaggctacatactgcttct-ccgcaaagtctacaatattgatacacaactgggatagacgcacttctgtgtgtcccaatagtgccctgttttatacctg-catggtatctgtga--ctgtgtggaaatggcctgtgtgtctgttcttttcaggtta-taagatatgattgttga-agggtggactatatcatcttcattttcttattccagtgtttgtcatagcaccttggcatgtggtggttgcata-atgaagttagaatgaGAAAACCAAAAGCTCTGATACATAACCACAGTGATAATTAACCGATTGTACAACTA-GGGCAAATTATTTTTAATAGTAATTTTGTATCATAGTTGTACA i otoGar3.GL873538 C 0 C 0 e eulMac1.LGHX01010766v1 11956 452 - 21805 I e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I a score=359719.000000 s hg38.chrUn_KI270746v1 41542 44 + 66486 TACATATTTTTCATTCTTATTAACACTGATAAACTTTTCAACTT s panPan2.chr2A 89850219 44 + 114371477 TACATATTTTTCATTCTTATTAACACTGATAAACTTTTCAACTT i panPan2.chr2A C 0 C 0 s gorGor5.CYUI01015730v1 866408 44 - 998796 TACACATTTTTCATTCTTATTAACACTGATAAACTTTTCAACTT i gorGor5.CYUI01015730v1 C 0 C 0 s nomLeu3.chr14 47862606 44 + 94967081 TACATATTTTTCATTCTTATTAACACTGATAAACTTTTCAACTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108571681 44 + 108979918 TACTTATTTTTCATTCTTATTAACACTGATAAACGTTTCAACTC i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17708418 44 + 111193037 TACTTATTTTTCATTCTTATTAACACTGATAAACGTTTCAACTC i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10574233 44 - 11597128 TACTTATTTTTCATTCTTATTAACACTGATAAACGTTTCAACTC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5063500 44 - 5626091 TACTTATTTTTCATTCTTATTAACACTGATAAACGTTTCAACTC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16537360 44 + 107702431 TACTTATTTTTCATTCTTATTAACACTGATAAACGTTTCAACTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 349494 44 - 409142 TACTTATTTTTCATTCTTATTAACACTGATAAACGTTTCAACTC i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14841019 44 + 108792865 TGCATATTTTTCATTCTTACTAATGCTGATAAATTTTTGAACTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27279656 44 - 28799539 TGCATATTTTTCATTCTTACTAATGCTGATAAACTTTTCAAGTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 101314 44 - 3620821 TGCATATTTTTCATTCTTATTAATGCTGATAAACTTTTCAAGTT i cebCap1.NW_016107537v1 C 0 C 0 s eulMac1.LGHX01010766v1 12408 44 - 21805 TACATATTTTTCATTCTTATTAACCCTGATAAAGTTCTCAACTT i eulMac1.LGHX01010766v1 I 452 N 0 s otoGar3.GL873538 19696710 44 - 27850971 TACATATTTTTCATTCTTATTAATACTGATAAAATTTTCAACTC i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I a score=75524.000000 s hg38.chrUn_KI270746v1 41586 11 + 66486 ---------ATACTGACTTT s panPan2.chr2A 89850263 11 + 114371477 ---------ATACTGACTTT i panPan2.chr2A C 0 N 0 s gorGor5.CYUI01015730v1 866452 11 - 998796 ---------ATACTGACTTT i gorGor5.CYUI01015730v1 C 0 N 0 s nomLeu3.chr14 47862650 11 + 94967081 ---------ATACTGACTTT i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108571725 11 + 108979918 ---------ATACTGACTTT i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17708462 11 + 111193037 ---------ATACTGACTTT i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10574277 11 - 11597128 ---------ATACTGACTTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5063544 11 - 5626091 ---------ATACTGACTTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16537404 11 + 107702431 ---------ATACCGACTTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 349538 11 - 409142 ---------ATACTGACTTT i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14841063 11 + 108792865 ---------TTACTGACTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27279700 11 - 28799539 ---------TTACTGACTTT i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 101358 11 - 3620821 ---------TTGCTGACTTT i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19696754 20 - 27850971 TTTTTTTCTTAACTGACTTT i otoGar3.GL873538 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I a score=424582.000000 s hg38.chrUn_KI270746v1 41597 87 + 66486 CTCTCAGTTAACTGTGAAATCATTTAGATAAAGAATATAA----TTCTTTTTCATTCTAA---CTTCTGAATTTAAATCTGAATCCTCTATAGC s nomLeu3.chr14 47862661 87 + 94967081 CTCTTAGCTAACTGTGAAATCATTTAGATAAAGAATATAA----TTCTTTTTCATTCTAA---CTTCTGAATTTAAATCTGAATCCTCTATAGc i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108571736 94 + 108979918 CTCTTAGTTAACTGTGAAATCATTTAGCTAAAGAATATAATTCTTTCTTTTTCATTCTGACTTCTTCTGAATTTAAATCCGGATCCTCTATAGc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17708473 94 + 111193037 CTCTTAGTTAACTGTGAAATCATTTAGCTAAAGAATATAATTCTTTCTTTTTCATTCTGACTTCTTCTGAATTTAAATCCGGATCCTCTATAGc i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10574288 94 - 11597128 CTCTTAGTTAACTGTGAAATCATTTAGCTAAAGAATATAATTCTTTCTTTTTCATTCTGACTTCTTCTGAATTTAAATCCGGATCCTCTATAGc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5063555 94 - 5626091 CTCTTAGTTAACTGTGAAATCATTTAGCTAAGGAATATAATTCTTTCTTTTTCATTCTGACTTCTTCTGAATTTAAATCCGGATCCTCTATAGc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16537415 94 + 107702431 CTCTTAGTTAACTGTGAAATCATTTAGCTAAAGAATATAATTCTTTCTTTTCCATTCTGACTTCTTCTGAATTTAAATCCGGATCCTCTATAGc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 349549 94 - 409142 CTCTTAGTTAACTGTGAAATCATTTAGCTAAGGAATATAATTCTTTCTTTTTCATTCTGACTTCTTCTGAATTTAAATCCGGATCCTCTATAGc i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14841074 94 + 108792865 ATCTTAGCTAACTATGAAATCATTTAGATAAAGAATACAATTCTTTCTTTTTCATTCTATCTTCCTCTAAATTTAAATCTGGGTCCTCTATTGc i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27279711 92 - 28799539 ATCTTAGCTAACTATGAAATCATTTAGATAAAGAATAC-ATTCTTTCTTTTTCATCCTATCTTCCTCTAAA-TTAAAACTGGGTCCTCTATTGc i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 101369 94 - 3620821 ATCTTAGCTAACTATGAAGTCATTTAGATAAAGAATACAATTCTTTCTTTTTCATCCTATCTTCCTCTAAATTTAAATCTGGGTCCTCTATTGc i cebCap1.NW_016107537v1 C 0 C 0 s otoGar3.GL873538 19696774 94 - 27850971 CACTTAGTGATTAACAAAATGCCTTAGATAAAGAATATAATTCTTTCTTTTTGTTTTTAGCCGCTGCTGAATTGGAAACTGAATCCTGTATAGC i otoGar3.GL873538 C 0 N 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I a score=101056.000000 s hg38.chrUn_KI270746v1 41684 22 + 66486 AGGGGTCCCCAACCCCCAGGCC s nomLeu3.chr14 47862748 22 + 94967081 aggggtctccaacccccaggcc i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108571830 22 + 108979918 aggggtccccaacccccaggtc i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17708567 22 + 111193037 aggggtccccaacccccaggtc i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10574382 22 - 11597128 aggggtccccaacccccaggtc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5063649 22 - 5626091 aggggtccccaacccccaggcc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16537509 22 + 107702431 aggggtccccaacccccaggcc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 349643 22 - 409142 aggggtccccaacccccaggcc i manLeu1.NW_012101154v1 C 0 C 0 s calJac3.chr14 14841168 22 + 108792865 aggagtccccaacctgcaggcc i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27279803 22 - 28799539 aggagtccccaacctgccggcc i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 101463 22 - 3620821 aggagtccccaacccgcaggcc i cebCap1.NW_016107537v1 C 0 C 0 e nasLar1.chrUn_JMHX01065601v1 526 19 + 650 I a score=19690.000000 s hg38.chrUn_KI270746v1 41706 4 + 66486 ACAG s nomLeu3.chr14 47862770 4 + 94967081 acag i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108571852 4 + 108979918 acgg i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17708589 4 + 111193037 acgg i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10574404 4 - 11597128 acgg i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5063671 4 - 5626091 acgg i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16537531 4 + 107702431 atgg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 349665 4 - 409142 acgg i manLeu1.NW_012101154v1 C 0 C 0 s nasLar1.chr13 103958417 4 + 126811233 acgg i nasLar1.chr13 I 10861 C 0 s calJac3.chr14 14841190 4 + 108792865 acag i calJac3.chr14 C 0 C 0 s saiBol1.JH378124 27279825 4 - 28799539 acag i saiBol1.JH378124 C 0 C 0 s cebCap1.NW_016107537v1 101485 4 - 3620821 acag i cebCap1.NW_016107537v1 C 0 N 0 a score=19580.000000 s hg38.chrUn_KI270746v1 41710 6 + 66486 TCAGGT s nomLeu3.chr14 47862774 6 + 94967081 acaggt i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108571856 6 + 108979918 acaggt i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17708593 6 + 111193037 acaggt i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10574408 6 - 11597128 acaggt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5063675 6 - 5626091 acaggt i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16537535 6 + 107702431 acaggt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 349669 6 - 409142 acaggt i manLeu1.NW_012101154v1 C 0 C 0 s nasLar1.chr13 103958421 6 + 126811233 acatgg i nasLar1.chr13 C 0 C 0 s calJac3.chr14 14841194 6 + 108792865 atgggt i calJac3.chr14 C 0 N 0 s saiBol1.JH378124 27279829 6 - 28799539 aggggt i saiBol1.JH378124 C 0 C 0 a score=4190.000000 s hg38.chrUn_KI270746v1 41716 1 + 66486 C s nomLeu3.chr14 47862780 1 + 94967081 c i nomLeu3.chr14 C 0 C 0 s rheMac8.chr13 108571862 1 + 108979918 c i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17708599 1 + 111193037 c i macFas5.chr13 C 0 C 0 s macNem1.NW_012014799v1 10574414 1 - 11597128 c i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5063681 1 - 5626091 c i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16537541 1 + 107702431 c i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 349675 1 - 409142 c i manLeu1.NW_012101154v1 C 0 C 0 s nasLar1.chr13 103958427 1 + 126811233 t i nasLar1.chr13 C 0 C 0 s calJac3.chr8 33679504 1 - 128169293 C i calJac3.chr8 N 0 C 0 s saiBol1.JH378124 27279835 1 - 28799539 c i saiBol1.JH378124 C 0 C 0 a score=9823.000000 s hg38.chrUn_KI270746v1 41717 2 + 66486 CA s nomLeu3.chr14 47862781 2 + 94967081 ca i nomLeu3.chr14 C 0 N 0 s rheMac8.chr13 108571863 2 + 108979918 ca i rheMac8.chr13 C 0 C 0 s macFas5.chr13 17708600 2 + 111193037 ca i macFas5.chr13 C 0 N 0 s macNem1.NW_012014799v1 10574415 2 - 11597128 ca i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 5063682 2 - 5626091 ca i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 16537542 2 + 107702431 ca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101154v1 349676 2 - 409142 ca i manLeu1.NW_012101154v1 C 0 C 0 s nasLar1.chr13 103958428 2 + 126811233 ca i nasLar1.chr13 C 0 N 0 s calJac3.chr8 33679505 2 - 128169293 TG i calJac3.chr8 C 0 C 0 s saiBol1.JH378124 27279836 2 - 28799539 ca i saiBol1.JH378124 C 0 N 0 s otoGar3.GL873572 5473540 2 - 12253515 CA i otoGar3.GL873572 N 0 C 0 a score=12341.000000 s hg38.chrUn_KI270746v1 41719 2 + 66486 TG- s panTro5.chr2A 90600479 2 + 111504155 TG- i panTro5.chr2A N 0 C 0 s panPan2.chr7 155953717 2 + 162613886 TG- i panPan2.chr7 N 0 C 0 s nomLeu3.chr13 102824816 2 + 110113093 TG- i nomLeu3.chr13 N 0 C 0 s rheMac8.chr13 108571865 2 + 108979918 tg- i rheMac8.chr13 C 0 N 0 s macFas5.chr3 184932105 2 + 192294377 TG- i macFas5.chr3 N 0 C 0 s macNem1.NW_012014799v1 10574417 2 - 11597128 tg- i macNem1.NW_012014799v1 C 0 N 0 s cerAty1.NW_012001187v1 5063684 2 - 5626091 tg- i cerAty1.NW_012001187v1 C 0 N 0 s chlSab2.chr14 16537544 2 + 107702431 tg- i chlSab2.chr14 C 0 N 0 s manLeu1.NW_012101154v1 349678 2 - 409142 tg- i manLeu1.NW_012101154v1 C 0 N 0 s calJac3.chr8 33679507 2 - 128169293 TG- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17017466 2 + 19594188 TG- i saiBol1.JH378140 N 0 C 0 s cebCap1.NW_016107335v1 4902939 2 - 11686629 TG- i cebCap1.NW_016107335v1 N 0 C 0 s aotNan1.NW_018506100v1 3254577 2 - 4527795 TG- i aotNan1.NW_018506100v1 N 0 C 0 s otoGar3.GL873572 5473542 2 - 12253515 -GG i otoGar3.GL873572 C 0 C 0 a score=28313.000000 s hg38.chrUn_KI270746v1 41721 11 + 66486 GAGTATACAGT s panTro5.chr2A 90600481 11 + 111504155 GAGTATACAGT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155953719 11 + 162613886 GAGTATACAGT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102824818 11 + 110113093 GAGTATACAGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184932107 7 + 192294377 GAGTACA---- i macFas5.chr3 C 0 C 0 s calJac3.chr8 33679509 11 - 128169293 GAGTATATAGT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17017468 11 + 19594188 GAGTTTATAGT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4902941 11 - 11686629 GAGTATATAGT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3254579 11 - 4527795 GAGTACATAGT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5473544 11 - 12253515 GAGTGTATTGC i otoGar3.GL873572 C 0 C 0 a score=775708.000000 s hg38.chrUn_KI270746v1 41732 81 + 66486 TTAAGACCTCTGCTGTACAGCTATACCTCCATGCTTGCTTT-----CAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT s panTro5.chr2A 90600492 81 + 111504155 TTAAGACCTCTGCTGTACAGCTATACCTCCATGCTTGCTTC-----CAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155953730 81 + 162613886 TTAAGACCTCTGCTGTACAGCTATACCTCCATGCTTGCTTC-----CAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102824829 81 + 110113093 TTAAGACCTCTGCTGTACAGCTATACCTCCATGCTTGCTTC-----CAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178442389 81 + 185818997 TTAAGACCTCTGCTGTACAGCTATACCTCCATGCTTGCTTC-----CAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i rheMac8.chr3 N 0 I 304 s macFas5.chr3 184932114 81 + 192294377 TTAAGACCTCTGCTGTACAGCTATACCTCCATGCTTGCTTC-----CAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i macFas5.chr3 C 0 I 304 s macNem1.NW_012015910v1 7900644 81 + 15219753 TTAAGACCTCTGCTGTACAGCTATACCTCCATGCTTGCTTC-----CAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i macNem1.NW_012015910v1 N 0 I 313 s cerAty1.NW_012008583v1 9545192 81 + 11639508 TTAAGACCTCTGCTGTACAGCTATACCTCCATGCTTGCTTC-----CAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i cerAty1.NW_012008583v1 N 0 C 0 s chlSab2.chr21 120396752 81 + 127223203 TTAAGACCTCTGCTGTACAGCTATACCTCCATGCTTGCTTC-----CAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i chlSab2.chr21 N 0 C 0 s manLeu1.NW_012102765v1 1523083 81 - 2854183 TTAAGACCTCTGCTGTACAGCTATACCTCCATGCTTGCTTC-----CAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i manLeu1.NW_012102765v1 N 0 C 0 s colAng1.NW_012115154v1 20229678 81 + 27496150 TTAAGACCGCTGCTGTACAGCTATACCTCCATGCTTGCCTC-----CAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i colAng1.NW_012115154v1 N 0 I 32 s calJac3.chr8 33679520 86 - 128169293 TTAAGACCCCTGCTGTACAGCTATACCACCATGCTTGGTTTGAATAAAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17017479 86 + 19594188 TTAGACCCCCTACTGTACAGCCATACCTCCATGCTTGCTTTGAATAAAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4902952 84 - 11686629 TTAAGACCCCTCCTGT--AGCCATACCTCCATGCTTGCTTTGAATAAAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3254590 86 - 4527795 TTAAGACCCCTGCTATACAGCTATACCTCCATGCTTGCTTTGAATAAAGTGGCCA--TGACACTTTATTCAAATATGTAAGTTTTATT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5473555 81 - 12253515 --AGGACCCCAGGCCACCAACTATAACTCCATGTTTACTTC-----CAGAGACCATTTGTTACTTTATTCAAATATACAAGTTTAATT i otoGar3.GL873572 C 0 C 0 a score=1855143.000000 s hg38.chrUn_KI270746v1 41813 215 + 66486 AAGACTGAGTTCTTAAAAAGAAAAA------ACCAAGAA--CCTTAGATACAACTAGTGAAGTATTGAGACCTGTCCATATTTAAAACCAAGCACACAA--------TACCACTTAAAACGTTCCCCAGAAAGCCTCTATACTGAAATGCTTGAAAGTGAGCAGTGCTGACTCTCGATTATTACC-AATTGCATTAAATATGACACTTGTTTTGTTTCTTTTGGCTATAAGG s panTro5.chr2A 90600573 215 + 111504155 AAGACTGAGTTCTTAAAAAGAAAAA------ACCAAGAA--CCTTAGATACAACTAGTGAAGTATTGAGACCTGTCCATATTTAAAACCAAGCATACGA--------TACCACTTAAAAGGTTCCCCAGAAAGCCTCTATCCTGAAATGCTTGAAAGTGAGCAGTGCTGACTCTCGATTATTACC-AATTGCATTAAATATGACACTTGTTTTCTTTCTTTTGGCTATAAGG i panTro5.chr2A C 0 C 0 s panPan2.chr7 155953811 212 + 162613886 AAGACTGAGTTCTTAAAA--GAAAA------ACCAAGAA--CCTTAGATACAACTAGTGAAGTATTGAGACCTGTCCATATTTAAAACCAAGCACACGA--------TACCACTTAAAAGGTTCCCCAGAAAGCCTCTATCCTGAAATGCTTCAAAGTGAGCAGTGCTGACTCTCGATTATTACC-AATTGCATT-AATATGACACTTGTTTTGTTTCTTTTGGCTATAAGG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102824910 215 + 110113093 AAGACTGAGTTCTTAAAAAGAAAAA------ACCAAGAA--CCTTAGATTCAACTACTGAAGTATTGAGACCTGTCCATATTTAAAACCAAGCACATGA--------TACCACTTAAAAGGTTCCCCAGAAAGCCTCTATCCTGAAATGCTTGAAAGTGAGCAGTGCTGACTCTCGATTACTACC-AATTGCATTAAATATGACACTTGTTTTGTTTCTTTTGGCTATAAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178442774 209 + 185818997 aaGACTGAGTTCTTAAAAAGAAAAC------ATCAAGAA--CC------TCAACTACTGAAGTATTGAGACCTGTCCATATTTAAAACCAAGCACACGA--------TACCACTTAAAAGGTTCCCCAGAAAGCCTCTATCCTGAAATGCTTGAAAGTGAGCAGTGCTGACTCTCGATTATTACC-AATTGCATTAAATATGACATTTGTTTTGTTTCTTTTGGCTATAAGG i rheMac8.chr3 I 304 C 0 s macFas5.chr3 184932499 215 + 192294377 aaGACTGAGTTCTTAAAAAGAAAAC------ATCAAGAA--CCTTAGATTCAACTACTGAAGTATTGAGACCTGTCCATATTTAAAACCAAGCACACGA--------TACCACTTAAAAGGTTCCCCAGAAAGCCTCTATCCTGAAATGCTTGAAAGTGAGCAGTGCTGACTCTCGATTATTACC-AATTGCATTAAATATGACATTTGTTTTGTTTCTTTTGGCTATAAGG i macFas5.chr3 I 304 C 0 s macNem1.NW_012015910v1 7901038 215 + 15219753 aaGACTGAGTTCTTAAAAAGAAAAC------ATCAAGAA--CCTTAGATTCAACTACTGAAGTATTGAGACCTGTCCATATTTAAAACCAAGCACACGA--------TACCACTTAAAAGGTTCCCCAGAAAGCCTCTATCCTGAAATGCTTGAAAGCGAGCAGTGCTGACTCTCGATTATTACC-AATTGCATTAAATATGACATTTGTTTTGTTTCTTTTGGCTATAAGG i macNem1.NW_012015910v1 I 313 C 0 s cerAty1.NW_012008583v1 9545273 215 + 11639508 AAGACTGAGTTCTTAAAAAGAAAAC------ATCAAGAA--CCTTAGATTCAACTACTGAAGTATTGAGACCTGTCCATATTTAAAACCAAGCACACGA--------TACCACTTAAAAGGTTCCCCAGAAAGCCTCTATCCTGAAATGCTTGAAAGTGAGCAGTGCTGACTCTCGATTATTACC-AATTGCATTAAATATGACATTTGTTTTGTTTCTTTTGGCTATAAGG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120396833 215 + 127223203 AAGACAGAGTTCTTAAAAAGAAAAA------ATCAAGAA--CCTTAGATTCAACTACTGAAGTATTGAGACCTGTCCATATTTAAAACCAAGCACACGA--------TACCACTTAAAAGGTTCCCCAGAAAGTCTCTATCCTGAAATGCTTGAAAGTGAGCAGTGCTGACTCTCGATTATTACC-AATTGCATTAAATATGACACTTGTTTTGTTTCTTTTGGCTATAAGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1523164 215 - 2854183 AAGACTGAGTTCTTAAAAAGAAAAC------AACAAGAA--CCTTAGATTCAACTACTGAAGTATTGAGACCTGTCCATATTTGAAACCAAGCACACGA--------TACCACTTAAAAGGTTCCCCAGAAAGCCTCTATCCTGAAATGCTTGAAAGTGAGCAGTGCTGACTCTCGATTATTACC-AATTGCATTAAATATGACATTTGTTTTGTTTCTTTTGGCTATAAGG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20229791 213 + 27496150 AAGACTGAGTTCTTAAAAAGAAAA-------ACCAAGAA--CCTTAGATTCAAC-ACTGAAGTATTGAGACCTGTCCATATTTAAAACCAAGCACACGA--------TACCACTTAAAAGGTTCCCCAGAAAGCCTCTATCCTGAAATGCTTGAAAGTGAGCAGTGCTGACTCTCGATTATTACC-AATTGCATTAAATATGGCACTTGTTTTGTTTCTTTTGGCTGTAAAG i colAng1.NW_012115154v1 I 32 C 0 s calJac3.chr8 33679606 193 - 128169293 GAAACTGAGTTCTTAAAAAGAAAAA------AA-AAAGA----------------ACTAAAGTATTGAGACCTGCCCATATTTAAAGCCAAGCACCTGA--------TACTACTTAAAAGGTTCCTGGGAAAGCCTCTATCCTAG-ATGCTTGAAAATAAGCAGTGTTGACTC------ATTACT-CATTACATTAAATATGACATTTGTTTTGTTTCTTTTGGCTATAAGG i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17017565 210 + 19594188 AGGACTGAGTTCTTAAAAAGAAAAA------AA-AAAAGAACCTTAAATTCAACTACTGAAATATTGAGACCTGTCCATATTTAAAGCCAAGCACCTGC--------AACTACTTAAAAGTTTCCTCAGAAAGCCTCTATCCTAGAATGCTTGAAAGTGAGCAGCGTTGACTC------ATTACT-CATTACATTAAACATGACATTTGTTTTGTTTCTTTTGGCTGTAAGG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4903036 208 - 11686629 AGGACTGAGTTCTTAAAAAGAAAAA------AA-AAGAA--CCTTAGATTCAACTACTGAAGTATTGAGACCTGTCCATATTTAAAGCCAAGCACCTGA--------TACTACTTAAAAGGTTCCTCAGAAAGCCTCTATCCTAGAATGCTTGAAAGTGAGCAGTGTTGACTC------ACTATT-CATTACATTAAATATGACATTTGTTTTGTTTCTTTTGGCTAGAAGG i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3254676 208 - 4527795 AGGACTGAGTTCTTAAAAAGAAAAA------AA-AAGAA--CCTTAGATTCAACTACTGAAGTATTGAGACCTGTCCATATTTAAAGCCAAGCACCTGA--------TACTACTTAAAAGGTTCCTCAGAAAGCCTCTATCCTAGAATGCTTGAAAGTGAGCAGTGTTGACTC------ATCACT-CATTACATTAAATATGACATTTATTTTGTTTCTTTTGGCTGTAAGG i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5473636 205 - 12253515 AAGACTGAGTTCTTAAAATGAAAAACTAAACAAAAAGAA--TCTTACATTCGATAGTTGAAGTACTGAGACATATCCATATTTAAAT---AGCCTTTAAAACTTAATTACCATCTAAAAAATTACTCAGTATGTCTCTATACTTAAATGTGTGACAG-------------------ACTACTACTGAATTGCATTAAATATAACATTTGTTTTGTGTCCTTCAACTATA--- i otoGar3.GL873572 C 0 C 0 a score=874968.000000 s hg38.chrUn_KI270746v1 42028 91 + 66486 AGAAAATCTCATTTTGTATATGAGTGAGCACAGAGGAGAGAGAATGCGGGAAAGAATAGAATGGGCCAATAATTTTTTACTAAATACTCCA s panTro5.chr2A 90600788 91 + 111504155 AAAAAATGTCATTTTGTATATGAGTGAGCACAGAGGAGAGAGAATGTGGGAAAGAACAGAATGGGCTAATAATTTTTTACTAAATACTCCA i panTro5.chr2A C 0 C 0 s panPan2.chr7 155954023 90 + 162613886 AGAAAATGTCATTTTGTATACGAGTGAGCATAGAGGAGAGAGAATGCGGGAAAGAACAGAATGGGCTAATAA-TTTTTACTAAATATTCCA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102825125 91 + 110113093 AGAAAATGTCTTTTTGTATACGAGTGAGCACAGAGGAGAGAGAATGCGGGAAAGAACAGAATGGGCTAATAATTTTTTACTAAATACTCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178442983 91 + 185818997 AGAAAATGTCTTTTTGTATACGAGTGAGCATAGAGGAAACAGAATGTGGGAAAGAACAGAATGGGCTAATAATTTTTTACTAAATACTCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184932714 91 + 192294377 AGAAAATGTCTTTTTGTATACGAGTGAGCATAGAGGAAAGAGAATGTGGGAAAGAACAGAATGGGCTAATAATTTTTTACTAAATACTCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7901253 91 + 15219753 AGAAAATGTCTTTTTGTATACGAGTGAGCACAGAGGAAAGAGAATGTGGGAAAGAACAGAATGGGCTAATAATTTTTTACTAAATACTCCA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9545488 91 + 11639508 AGAAAATGTCTTTTTGTATACGAGTGAACATAGAGGAAAGAGAATGTGGGAAAGAACAGAATGGGCTAATAATTTTTTACTAAATACTCCA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120397048 91 + 127223203 AGAAAATGTCTTTTTGTATACGAGTGAGCATAGAGGAGAGAGAATGTGAGAAAGAACAGAACGAGCTAATAATTTTTTACCAAATACTCCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1523379 91 - 2854183 AGAAAATGTCTTTTTGTATACGAGTGAGCATAGAGGAAAGAGAATGTGGGAAAGAACAGAATGGGCTAATAATTTTTTACTAAATACTCCA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20230004 88 + 27496150 AGAAAATGTCTTTTTGTATATGAGTGAGCATAGAG---AGAGAATGTGGGAAAGAACAGAATGGGCTAATAATTTTTTACTAAATACTCCA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33679799 91 - 128169293 AGAAAATGTCCTTTAGTATACGAGTGCGCAAAGAGGAGAGAGAATGTAAGAAAGAACAGAATGGGCTAATAATTTTTTACTACGTACTCCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17017775 91 + 19594188 AGAAAATGTCCTTTTGTATACGAGTGAGCAGAGAAGAGAAAGAATATGGGAAAGAACAGAATGGGCTAATAATTTTTTACAAAGTACTCCA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4903244 91 - 11686629 AGAAAATGTCCTTTTGTATACAAGTGAGCAGAGAGGAGAGACAAGGTGGGAAAGAACAGAATGGGCTAATAATTTTTTAGTAAGTACTCCA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3254884 91 - 4527795 AGAAAATGTCCTTTTGTATACGAGTGAGCAGAGAGGAGAAAGAATGTGGGAAAGAACAGAATGGGCAAGTAATTTTTTACTAAGTACTCCA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5473841 87 - 12253515 AGAAAATGTCCTTTTGTACAC-AGTGAGAGTTGA--AGAGTGAATGTGA-AGAGACTAGTACAGACTCATGAATTTTTACCAAGTACTCTA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16042481 90 + 59632846 AGAAAATGTCCTTTCATATACAGGTGAGGATTCAGAAGAATGAACATGGGAAGGGACAG-GTGAATGAATGGATTTTTATTAAGGTCTGTG i canFam3.chr16 N 0 C 0 a score=2954992.000000 s hg38.chrUn_KI270746v1 42119 321 + 66486 GTT---CTCAGCTTTTT----AAATCAACAGACAAA--ATGAATCACCT-AAACCTAAAATCTTT-GTGAAT---AGTATAAATTGTCTTTTAAATTAAATGCATATATTTTTATGTTTTACTTTTTCAAGACAAAAGCAGGAT-ATTAGTACAATATA--------AGATTTATAGAGGAGCAAATTTCTTGAGATAGGAAAC-CCTTAAAAGCAGTATTTAA--AGTGCTTAAATACTGTCACATATGTTTAATAAT---CA-T----AA--------TACTTAATTGTGAGAACTAGGAGCT-CATATTACTACTAAAACCAAAT----------------------AAAAAT--------TCAATACGTATTT--GTTAA--CTCAATTTAAGG s panTro5.chr2A 90600879 321 + 111504155 GTT---CTCAGCTTTAT----AAATCAACAGACAAA--ATGAATCAGCT-AAACCTAAAATCTTT-GTGAAT---AGTATAAATTGTCTTTTAAATTAAATGCATATATTTTTATGTTTTACTTTTTCAAGACAAAAGCAGGAT-ATTAGTACAATATA--------AGATTTATAGAGGAGCAAATTTCTTGAGATAGGAAAC-CCTTAAAAGCAGTATTTAA--AGTACTTAAATACTGTCACATATGTTTAATAAT---CA-T----AA--------TACTTAATTGTGAGAACTGGGAGCT-CATGTTACTACTAAAACCAAAT----------------------AAAAAT--------TCAATACATATTT--GTTAA--CTCAGTTTAAGG i panTro5.chr2A C 0 C 0 s panPan2.chr7 155954113 310 + 162613886 GTT---CTCAGCTTTTC----AAATCAGCAGACAAA--ATGAATCAGCTAAAACCTAAAATCTTTAGTGAAT---AGTATAAATTGTC-TTTAAATTAAATGCATATA-TTTTATGTTT---ACTTTCAAGACA-----AGTAT-ATT-GTACAATATA--------AGATTTATAGAGGAGCAAATTTCTTGAGATAGGAAAC-CCTTAAAAGCAGTATTT-A--AGTACTTAAATACTGTCACATATGTTTAATAAT---CA-T----AA--------TACTTAATTGTGAGACCTGGGAGCT-CATGTTACTACTAAAACCAAAT----------------------AAAAAT--------TCAATACATA-TT--GTTAA--CTCAATTTAAGG i panPan2.chr7 C 0 M 1771 s nomLeu3.chr13 102825216 321 + 110113093 GTT---CTCAGCTTTTT----AAATCAACAGACAAA--ATGAATCAGCT-AAACCTAAAATCTTT-GTGAAT---AGTATAAATTGTCTTTTACATTAAATGCATATATTTTTATGTTTTACTTTTTCAAGACAAAAGCAGGAT-ATTAGTACAATATA--------AAATTTATAGAGGAGCAAATTTCTTGAGATAGCAAAC-CCTTAAAAGCAGTATTTAA--AGTACTTAAATACTGTCACAGATGTTTAAGAAT---CA-T----AA--------TACTTAATTGTGAGAACTGGGAGCT-CATGTTACTACTAAAACCAAAT----------------------AAAAAT--------TCAATACATTTTT--GTTAA--CTCAATTTAAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178443074 321 + 185818997 GTT---CTCAGCTTTTT----AAATCAACAGACAAA--ATGAATCAGTT-AAACCTAAAATCTTT-GTGAAT---AGTATAAATTATCTTTTAAGTTAAATGCACATATTTTTATGTTTTACTTTTTCAAGACAAAAGCAGGAT-ATTAGTACAATATA--------AGATTTATAGAGGAGCAAATTTCTTGAGATAGCAAAC-CCTTAAAAGCAGTATTTAA--AGTACTTAAATACTGTCACATATGTATAGTATT---CA-T----CA--------TACTTAACTGTGAGAACTGGGAGTT-CATGTTACCACTCAAATCAAAT----------------------AAAAAT--------TCACTACATTTTT--GTTAA--TTCAATTTAAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184932805 321 + 192294377 GTT---CTCAGCTTTTT----AAATCAACAGACAAA--ATGAATCAGTT-AAACCTAAAATCTTT-GTGAAT---AGTATAAATTATCTTTTAAGTTAAATGCACATATTTTTATGTTTTACTTTTTCAAGACAAAAGCAGGAT-ATTAGTACAATATA--------AGATTTATAGAGGAGCAAATTTCTTGAGATAGCAAAC-CCTTAAAAGCAGTATTTAA--AGTACTTAAATACTGTCACATATGTATAGTATT---CA-T----CA--------TACTTAACTGTGAGAACTGGGAGTT-CATGTTACCACTCAAATCAAAT----------------------AAAAAT--------TCACTACATTTTT--GTTAA--TTCAATTTAAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7901344 321 + 15219753 GTT---CTCAGCTTTTT----AAATCAACAGACAAA--ATGAATCAGTT-AAACCTAAAATCTTT-GTGAAT---AGTATAAATTATCTTTTAAGTTAAATGCACATATTTTTATGTTTTACTTTTTCAAGACAAAAGCAGGAT-ATTAGTACAATATA--------AGATTTATAGAGGAGCAAATTTCTTGAGATAGCAAAC-CCTTAAAAGCAGTATTTAA--AGTACTTAAATACTGTCACATATGTATAGTATT---CA-T----CA--------TACTTAACTGTGAGAACTGGGAGTT-CATGTTACCACTCAAATCAAAT----------------------AAAAAT--------TCACTACATTTTT--GTTAA--TTCAATTTAAGG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9545579 321 + 11639508 GTT---TTCAGCTTTTT----AAATCAACAGACAAA--ATGAATCAGTT-AAACCTAAAATCTTC-GTGAAT---AGTATAAATTATCTTTTAAGTTAAATGCACATATTTTTATGTTTTACTTTTTCAAGACAAAAGCAGGAT-ATTAGTACAATATA--------AGATTTATAGAGGAGCAAATTTCTTGAGATAGCAAAC-CCTTAAAAGCAGTATTTAA--AGTACTTAAATACTGTCACATATGTATAATATT---CA-T----CA--------TACTTAACTGTGAGAACTGGGAGTT-CATGTTACCACTCAAATCAAAT----------------------AAAAAT--------TCACTACATTTTT--GTTAA--TTCAATTTAAGG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120397139 321 + 127223203 GTT---CTCAGCTTTTT----AAATCAACAGACAAA--ATGAATCAGTT-AAACCTAAAATCTTT-GTGAAT---AGTATAAATTATCTTTTAAGTTAAATGCACATATTTTTATGTTTTACTTTTTCAAGACAAAAGCAGGAT-ATTAGTACAATATA--------AGATTTATAGAGGAGCAAATTTCTTGAGATAGCAAAC-CCTTAAAAGCAGTATTTAA--AGTACTTAAATACTGTCACATATGTATAATATT---CA-T----CA--------TACTTAACTGTGAGAACTGGGAGTT-CATGTTACCACTCAAATCAAAT----------------------AAAAAT--------TCACTACATTTTT--GTTAA--CTCAATTTAAGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1523470 321 - 2854183 GTT---CTCAGCTTTTT----AAATCAACAGACAAA--ATGAATCAGTT-AAACCTAAAATCTTT-GTGAAT---AGTATAAATTATCTTTTAAGTTAAATGCACATATTTTTATGTTTTACTTTTTCAAGACAAAAGCAGGAT-ATTAGTACAATATA--------AGATTTATAGAGGAGCAAATTTCTTGAGATAGCAAAC-CCTTAAAAGCAGTATTTAA--AGTACTTAAATACTGTCACATACGTATAATATT---CA-T----CA--------TACTTAACTGTGAGAACTGGGAGTT-CATGTTACCACTCAAATCAAAT----------------------AAAAAT--------TCACTACATTTTT--GTTAA--TTCAATTTAAGG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20230092 321 + 27496150 GTT---CTCAGCTTTTT----AAATCAACAGACAAA--ATGAATCAGTT-AAACCTAAAATCTTT-GTGAAT---AGTATAAATTATCTTTTAAGTTAAATGCATATATTTTTATGTTTTACTTTTTCAAGACAAAAGCAGGAC-ATTAGTACAATATA--------AGATTTATAGAGGAGCAAATTTCTTCAAATAGCAAAC-CCTTAAAAGCAGTATTTAA--AGTACTTAAATACTGTCACATATGTATAATATT---CA-T----CA--------TACTTAACTGTGAGAACTGGGAGTT-CATGTTACCACTCAAATCAAAT----------------------AAAAAT--------TCACTACATTTTT--GTTAA--CTCAATTTAAGG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33679890 326 - 128169293 GTT---CT-AACTTTTT-----AATCAACAGACAAA--ATGAACCAGCT-AAACCTAAAACCTCT-GTGAAT---ATT----ATAGTCTTTTAAATTAAATGCATACATCTTTATGTTTTACTTTTCCAAGACAAAAGCAGAAT-ATTAGTACAATGGA-AGACCACAGATTTATAGAGGAGCAAATTTCTTGAGATACCAAAC-CCTTAAAAGCAGTATTTAA--AGTATTTAAATAATGTCACATATGTATAATAATAATCA-T----AA--------TACTTAATTGTGACAACTGGGAACTGCAAGTTACTATTGAAATCAAAT----------------------AAAAAT--------TCATTACATTTTT--GTTAA--CTCAATTTAATC i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17017866 327 + 19594188 GTT---CTCAACTTTTT-----AATCAACAGACAAA--ATGAACCAGCT-AAACCTAAAACCTCT-GTGAAT---ATT----ATAGTCTTTTAAATTAAATGCATACATCTTTATGTTTTACTTTTTCAAGACAAAAGCAGAAT-ATTAGTACAATGTA-AGACCACAGATTTATAGAGGAGCAAATTTCTTGAGATACCAAAC-CCTGAAAAGTAGTATTTAA--AGTATTTAAATACTATCACGTATGTATAATAATAATCA-T----AA--------TACTTAATTGTGAGAACTGGGAGTTGCATGTTACTACTCAAATCAAAT----------------------AAAAAT--------TCAATACATTTTT--GTTAA--CTCAATTTAAGC i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4903335 323 - 11686629 GTT---CTCAACTTTTT-----AATCAACAGACAAA--ATGAACCAGCT-AAAACTAAAACCTCT-GTGAAT---ATTATAAATAGCCTCTTAAATTAAATGTATACATCTTTATGTTTTACTTTTTCAAGACAAAAGCAGAAT-ATTAGTACAATGTA-CGACCACAGATTTATAGAGGAGCAACTTTCTTGAGATACCAAAC-CCTTAAAAGCAGTATTTA----------AAATACCGTCCCATACGTATAATAATAACCA-T----AA--------TACTTAATTGTGAGAACTGGGAGCTGCATGTTACTACTCAAATCAAAT----------------------AAAAAT--------TCAATACATTTTT--GTTAA--CTCAATTTAAGC i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3254975 332 - 4527795 GTT---CTCAACTTTTT-----AGTCAACAGACAAA--ATGACCCAGCT-AAACCTAAAACCTCT-GTGAAT---ATTATAAATAGTCTTTTAAATTAAATGCATACATCTTTATGTTTTACTTTTTCAAGACAAAAGCAGAAT-ATTAGTACAATGTA-AGACCACAGATTTATAGAGGAGCAAATTTCTTGAGATACCAAAC-CCTTAAAAGCAGTATTTAA--AGTACTTAAATACTGTCACATATGTATAATAATAATCATT----AA--------TACTTAATTGTGAGAACTGGGAGCTGCATGTTAGTACTCAAATCAAAT----------------------AAAAAT--------TCAATACATTTTT--GTTAA--CTCAATTTAAGC i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5473928 323 - 12253515 GCTGTACTCAACTTTTT------ATCTGAGGACAAA--ATAAGTCACCA-AAATCTAATGCCTTA-Gaaaat---aat---aatataactgtatattaaatacatatatttttatgtttta-tttttCAAGA-AATGACAGAAT-AATAGTATGATTTAAAGACCACAGATTTATACAAGAGTTAACTTCTTGAGGCAACAAAC-----------AATATTTGA--AGTACTTAAATATTGTCCCATATATATAATAAT---CC-T----AACAAATATTTAACTAATTTTAAGAAGTGGAAGCAGTATGTTACCATGCAAATCAAGT----------------------CAAAAT--------TCAATACACATTT---TTAA--CTGAATTTAAGC i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16042571 305 + 59632846 GTTGGTGTCAACTTTTTTTTATTATCAGCCGACAGA--ATGGATTGACT-AAACCTCATTCCTTA-ACAAATAAAAATATGAAGTATCTT-----TTAAAGATATGCATTTTTTATTTTTAGTTTTTCAAGACA---GCAGGATAACCACTACAATTTA-AGAGCACAGATTTAT--AGGAGTTAATTTTTTCAGTTAACA----CTTGAAAGGtaatatataaatattaaataaataCTGTCAC--ATGTCTAATAAT---CC-TAGCAAA--------TGATTAATTATAAGAAAT----------------------------AT----------------------CAAATT--------TCAATACATTTTT--AACAGATTTAAATGTATGT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1218877 338 + 1922530 GCT---CTCAAGTTTTA----TAATCAATAGACAAAACATGCCTTAGCA-AA------------T----AAT---AATATAAATTGTCTTTTAAACTAAATGCATGCATTTTTATGTTTTAC--TTCCAAGACAATAGCTGGATAATTAGTACAATTTA-AGACCAGAGAATTATAA------TTATTTCTTGAGGTAACAAACACTTTAAAAGCAATA----A--TGTATTTAACAA--GGCATGTAAGTATAATAAT---CA-T----AACAAATAT-TACTTTAT--TAATTATTGGAAGCAGCATGTTACTA---AAATCAGATCTCaataaatttttaaaagaaaaaaaattttaaacctcaatatatttgttaattaa--tttaatttaatt i dasNov3.JH575209 N 0 C 0 a score=1456168.000000 s hg38.chrUn_KI270746v1 42440 118 + 66486 ATGTTTACCTTAATACTGACACAGTGTGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACTACACACATATCCTGAA s panTro5.chr2A 90601200 118 + 111504155 ATGTTTACCTTAATACTGACACAGTATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCTACAAACTACACATATATCCTGAA i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102825537 118 + 110113093 ATGTTTACCTTAATACTGACACAGTATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACTACACACATATCCTGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178443395 118 + 185818997 ATGTTTACCTTAATACTGACACAGTATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACTACACACATATCCTGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184933126 118 + 192294377 ATGTTTACCTTAATACTGACACAGTATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACTACACACATATCCTGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7901665 118 + 15219753 ATGTTTACCTTAATACTGACACAGTATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACTACACACATATCCTGAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9545900 118 + 11639508 ATGTTTACCTTAATACTGACACAGTATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACTACACACATATCCTGAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120397460 118 + 127223203 ATGTTTACCTTAATACTGACACAGTATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACTACACACATATCCTGAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1523791 118 - 2854183 ATGTTTACCTTAATACTGACACAGTATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACTACACACATATCCTGAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20230413 118 + 27496150 ATGTTTACCTTAATACTGACACAGTATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAGCTGCCACAAACTACACACATATCCTGAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33680216 118 - 128169293 ATGTTTACCTTAATACTGACACAGTATGGATGATAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACTACACACATATCCTGAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17018193 118 + 19594188 ATGTTTACCTTAATACTGACACAATATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACCACACACATATCCTGAA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4903658 118 - 11686629 ATGTTTACCTTAATACTGACACAGTATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACTACACACATATCCTGAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3255307 118 - 4527795 ATGTTTACCTTAATACTGACACAGTATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCTGCTCCTTGGCCAAAACTGCCACAAACTACACACATATCCTGAA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5474251 118 - 12253515 ATGTTTACCTTAATACTGACACAGTAGGGATGATAACACTGACCACACTGAGAACAGGCAAGTAATCTTCCTTCCGCTCCCTGCCCAAAACTGCCACAAACTACACACATATCCTGAA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16042876 118 + 59632846 CTATTTACCTTAATACTGACACAGTACGGATGGTAACACTGGCCACACTGAGAGCAGGCAAGCAGTCTTCCCTCTGCCCCTTGGCCGAAACTGCCACAAACTACACACATATCCTGAA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1219215 118 + 1922530 GTATTTACCTTAATACTGACACAATATGGATGGTAACACTGACCACACTGAGAACAGGCAAGTAATCGTCCTTCTGCTCCTTGGCCAAAACTCCCACAAACAACACACATATCCTGAG i dasNov3.JH575209 C 0 C 0 e panPan2.chr7 155954423 1771 + 162613886 M a score=7910.000000 s hg38.chrUn_KI270746v1 42558 1 + 66486 G s panTro5.chr2A 90601318 1 + 111504155 G i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102825655 1 + 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178443513 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184933244 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7901783 1 + 15219753 G i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9546018 1 + 11639508 G i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120397578 1 + 127223203 G i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1523909 1 - 2854183 G i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20230531 1 + 27496150 G i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33680334 1 - 128169293 G i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17018311 1 + 19594188 G i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4903776 1 - 11686629 G i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3255425 1 - 4527795 G i aotNan1.NW_018506100v1 C 0 C 0 s tarSyr2.KE936121v1 74501 1 + 204143 A i tarSyr2.KE936121v1 N 0 I 9918 s otoGar3.GL873572 5474369 1 - 12253515 A i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16042994 1 + 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1219333 1 + 1922530 A i dasNov3.JH575209 C 0 C 0 e panPan2.chr7 155954423 1771 + 162613886 M a score=3832240.000000 s hg38.chrUn_KI270746v1 42559 379 + 66486 TTAAGAAAACA-GAACAT----ATTTTAAA-TGGAGACTAAGC--TAAAAACCTACAAATTTTACTTTAAAAATACCTTCTTAACTAATATA------------------------------------------------------------------GCTCTATAGCTAAATATTGGATCACTTCTGTGTATATGAGATA-AAGCAGAAATGTGC-AAGGAGGAATT-CAATGAG-GAAGACAGTAAATTGTCAAGTTCAAACCTGATTCAAAGTGAATTTGTCACTGCTAGAAAACAACACAACCGTAGTGTGCATAGAGTTTTCTTCATCATCCTTATTTGATGAAATATCTGCAGTAGACACCTATAAAAAAGCAAAATACACAAAATACGAAGTTATATTTTTCACTTGTTTTACACTTAACTGGAAAGCTTCAGAAAATTCATAATCAAAA s panTro5.chr2A 90601319 378 + 111504155 TTAAGAAAACA-GAACAT----ATTTTAAA-TGGAGACTAAGC--TAAAAACCTACAAATTTTACTTTAAAAATACCTTCTTAACTAATATA------------------------------------------------------------------GCTCTATAGCTAAATATTGGATCACTTCTGTGTATATGAGATA-AAGCAGAAATGTGC-AAGGAAGAATT-CAATGAG-GAAGACAGTAAATTGTCAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTGCTAGAAAACAACACAACCATATCGAGCACAGAGTTTTCTTCATCATCCTTATTTGATGAAATATCTGCAGTAGACACCTAT-AAAAAGCAAAATACACAAAATACGAAGTTATATTTTTCACTTGTTTTACACTTAACTGGAAAGCTTCAGAAAATTCATAATCAAAA i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102825656 377 + 110113093 TTAAGAAAACA-GAACAT----ATTTTCAA-TGGAGACTAAGC--TAAAAACCTACAAATTTTACTTTAAAAATACCTTCTTAACTAATATA------------------------------------------------------------------GCTCTATAGCTAAATATTGGATGACTTCTGTGTATATGAGATA-AAGTAGAAATGTGC-AAGGAGGAATT-CAATGAG-GAATACAGTAAATTGTCAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTGCTAGAAAACAACACAACTGTATTGTGCATAGAGTTTTCTTCATCATCCTTATTTGATGAAATATCTGCAGTAGACACCTAT-AGAAAGCAAAATACACAAAATACGAGGTTATATTTTTCACTTGTTTTACACTTAACTGGAAAGCTTCA-AAAATTCATAATCAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178443514 376 + 185818997 TTAAGAAAACA-GAACAT----ATTTTAAA-TGGAGACTAAGC--TAAAAATCTACAAATTTTACTTTAAAAATACCTTCTTAACTAATATA------------------------------------------------------------------GCTCTATAGCTAGATATTGGATGACTTCTG--TATATGAGATA-AAGCAGAAATGTGC-AAGGAGGAATT-CAATGAG-GAAGACAGTAAATTGTTAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTACTAGAAAACAACACAACTGTATTGTGCATAGAGTTTTCTTCATCATCCTTATTTGATGAAATATCTGCAGCAGACACCTAT-AAAAAGCAAAATACACAAAATACGAAGTTATATTTTTCACTTGTTTTACACTTAACTGGAAAGCTTCAGAAAATTCATAATCAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184933245 376 + 192294377 TTAAGAAAACA-GAACAT----ATTTTAAA-TGGAGACTAAGC--TAAAAATCTACAAACTTTACTTTAAAAATACCTTCTTAACTAATATA------------------------------------------------------------------GCTCTATAGCTAGATATTGGATGACTTCTG--TATATGAGATA-AAGCAGAAATGTGC-AAGGAGGAATT-CAATGAG-GAAGACAGTAAATTGTTAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTACTAGAAAACAACACAACTGTATTGTGCATAGAGTTTTCTTCATCATCCTTATTTGATGAAATATCTGCAGCAGACACCTAT-AAAAAGCAAAATACACAAAATACGAAGTTATATTTTTCACTTGTTTTACACTTAACTGGAAAGCTTCAGAAAATTCATAATCAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7901784 376 + 15219753 TTAAGAAAACA-GAACAT----ATTTTAAA-TGGAGACTAAGC--TAAAAATCTACAAATTTTACTTTAAAAATACCTTCTTAACTAATATA------------------------------------------------------------------GCTCTATAGCTAGATATTGGATGACTTCTG--TATATGAGATA-AAGCAGAAATGTGC-AAGGAGGAATT-CAATGAG-GAAGACAGTAAATTGTTAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTACTAGAAAACAACACAACTGTATTGTGCATAGAGTTTTCTTCATCATCCTTATTTGATGAAATATCTGCAGCAGACACCTAT-AAAAAGCAAAATACACAAAATACGAAGTTATATTTTTCACTTGTTTTACACTTAACTGGAAAGCTTCAGAAAATTCATAATCAAAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9546019 376 + 11639508 TTAAGAAAACA-GAACAT----ATTTTAAA-TGGAGACTAAGC--TAAAAATCTACAAATTTTACTTTAAAAATACCTTCTTAACTTATATA------------------------------------------------------------------CCTCTATAGCTAGATATTGGATGACTTCTG--TATATGAGATA-AAGCAGAAATGTGC-AAGGAGGAATT-CAATGAG-GAAGACAGTAAATTGTTAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTACTAGAAAACAACACAACTGTATTGTGCATAGAGTTTTCTTCATCATCCTTATTTGATGAAATATCTGCAGCAGACACCTAT-AAAAAGCAAAATACACAAAATACGAAGTTATATTTTTCACTTGTTTTACACTTAACTGGAAAGCTTCAGAAAATTCATAATCAAAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120397579 378 + 127223203 TTAAGAAAACA-GAACAT----ATTTTAAA-TGGAGACTAAGC--TAAAAATCTACAAATTTTACTTTAAAAATACCTTCTTAACTAATATA------------------------------------------------------------------GCTCTATAGCTAAATATTGGATGACTTCTGTATATATGAGATA-AGGCAGAAATGTGC-AAGAAGGAATT-CAATGAG-GAAGACAATAAATTGTTAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTACTAGAAAACAACACAACTGTATTGTGCATAGAGTTTTCTTCATCATCCTTATTTGACGAAATATCTGCAGCAGACACCTAT-AAAAAGCAAAATACACAAAATACGAAGTTATATTTTTCACTTGTTTTACACTTAACTGGAAAGCTTCAGAAAATTCATAATCAAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1523910 376 - 2854183 TTAAGAAAACA-GAACAT----ATTTTAAA-TGGAGACTAAGC--TAAAAATCTACAAATTTTACTTTAAAAATACCTTCTTAACTAATATA------------------------------------------------------------------GCTCTATAGCTAGATATTGGATGACTTCTG--TATATGAGATA-AAGCAGAAATGTGC-AAGGAGGAATT-CAATGAG-GAAGACAGTAAATTGTTAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTACTAGAAAACAACACAACTGTATTGTGCATAGAGTTTTCTTCATCATCCTTATTTGATGAAATATCTGCAGCAGACACCTAT-AAAAAGCAAAATACACAAAATACGAAGTTATATTTTTCACTTGTTTTACACTTAACTGGAAAGCTTCAGAAAATTCATAATCAAAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20230532 378 + 27496150 TTAAGAAAACA-GAACAT----ATTTTAAA-TGGAGACTAAGC--TAAAAATCTACAAATTTTACTTTAAAAATACCTTCTTAACTAATATA------------------------------------------------------------------GCTCTAAAGCTAAATATTGGATGACTTCTGTATATATGAGATA-AAGCAGAAATGTGC-AAGGAGGAATT-CAATGAG-GAAGACAGTAAATTGTTAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTACTAGAAAACAACACAACTGTATTGTGCATAGAGTTTTCTTCATCATCCTTATTTGATGAAATATCTGCAGCAGACACCTAT-AAAAAGCAAAATACACAAAATATGAAGTTATATTTTTCACTTGTTTTACACTTAACTGGAAAGCTTCAGAAAATTCATAATCAAAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33680335 374 - 128169293 TTAAGAAAACA-GAACAT----ATTTTAAA-TGGAGACTAAGC--TAAGAATCTACAAATTTTATTTTAAAAATACCTTCT----TAATATA------------------------------------------------------------------GCTCTTTAGCTAAATATTAAATGACTTCTGTGCATATGAGATG-AAGTAGAAATGTAC-AAGGAGAAATT-CAACATA-GAAGACAGTAAATTGTTAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTACTAGAAAATAACACAACTGTATTGTGCATAGAGTTCTCTTCATCATCCTTATTTGATGAAATGTCTGCAGTAGACACCTAT-AAAAAGCAAAATACACAAAATATGAAGTTATATTTTTCACTTGTTTTACACTCAACTGGAAAGCTTCAGAAAATTCATAATCAAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17018312 378 + 19594188 TTAAGAAAACA-CAACAT----ATTTTAAA-TGGAGACTAAGC--TAAGAATCTACAAATTTTATTTTTAAAATACCTTTTTAACTAATAGA------------------------------------------------------------------GCTCTATAGCTAAATATTAAATGACTTCTGTGTATACGAGATG-AAGTAGAAATGTAC-AAGGAGAAATT-CAACATG-GAAGACAGTAAATCGTTAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTACTAGAAAATAACACGACTGTATTGTGCATAGAGTTCTCTTCATCATCCTTATTTGATGAAATGTCTGCAGTAGACACCTAT-AAAAAGCAAAATACACAAAATACGAAGTTATATTTTTCACTTGTTTTACACGCAACTGGAAAACTTCAGAAAATTCATAATCAAAA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4903777 378 - 11686629 TTAAGAAAACA-GAACAT----ATTTTAAA-TGAAGACTAAGC--TAAGAATCTACAAATTTTATTTTTAAAATACCTTCTTAACTAATAGA------------------------------------------------------------------GCTCTATAGCTAAATATTAAATGACTTCTGTGTATATGAGATG-AAGTAGAAATGTAG-AAGGAGAAATT-CAACAGA-GAAGACAGTAAATTGTTAAGTTCAAACCTGATTCAAAGTGAACTTGTCACTACTAGAAAATAACACAACTGTATTGTGCATAGAGTTCTCTTCATCATCCTTATTTGATGAAATGTCTGCAGTAGACACCTAT-AAAAAGCAAAATACACAAAATATGAAGTTATATTTTTCACTTGTTATACACTCAACTGGAAAACTTCAGAAAATTCATAATCAAAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3255426 378 - 4527795 TTAAAAAAACA-GAACAT----ATTTTAAA-TGGAGACTAAGC--TAAGAATCTACAAATTTTATTTTAAAAATACCTTCTTAACTAATATA------------------------------------------------------------------GCTCTATAGCTAAATACTAAATGACTTCTGTGTATAGGAGATG-AAGCAGAAATGTAC-AAGGAGAAATT-CAACATA-GAAGACAGTAAACTGTTAAGTTCAAACCTGATTCAAAGTGAACTTGTCATTACTAGAAAATAACACAACTGTATTGTGCATAGAGTTCTCTTCATCATCCTTATTTGATGAAATGTCTGCAGTAGACACCTAT-AAAAAGCAAAATACACAAAATATGAAGTTATATTTTTTACTTGTTTTACACTCAACTGGAAAACTTCAGAAAATTCATAATCAAAA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5474370 443 - 12253515 TCAAGAAAACATGAACGT----ATTTTAAATTGGACATTAAGC--TAAGAATATACAAGTTTTATTTT-AAAGTATAATCTGAATTAATATAGCTGTACAGTTCTTTATGGTGCAGATCTATATTAGCAGTGTTAAAAATATAAAAACAAAAAATATGGCTGTACAGCTAAATACAAGATGACTTCTGTGCATATGGAAGA-AAGTAAAAATGGGCAAAAGAGGAATTAAAAAGTA-CAAGACAATAA----TTAAGTCCAAACCTGATTCAAAGTGAACTTGTCACTACTAGAAAACAAGACAACTGTATTGTGCATAGAGTTTTCTTCTTCATCCTTATTTGATGAAATATCTGCAGTAGACACCTAT-AAAAAGCAAAATATACAGAACATGAAGTTATGATTTTTACTTATATTACACTTAACTGGAAAGCCTTAGAAAATTCATATTCACAg i otoGar3.GL873572 C 0 I 335 s canFam3.chr16 16042995 356 + 59632846 TTAAAAACAT--GAACATAGTAATTGACAT-CGAAGACACAGTTATAAAAATGTACTAGTTTTATTTT------------TTAGCTCATAGA------------------------------------------------------------------GCTCTAAAGCTAAAGAGCAGAGGACTTCAGTGCATGTGGGATA-CAGCAGAAAGGGGG-AGATAGGAACT-CGAAGTG-GAGGAGAA-------CTGAGCTCAAACCTGGTGCAAGGTGAACTTGTCGCTGCTAGAAAACAGCACCACCGTGTTGTGCATGGAGTTTTCTTCTTCATCCTTATTCGATGAAACATCTGTAGCAGACACCTAC-AGAAAGCAAAAG----AGAGTGCACAGTCACACTCTTCACTTATAGCACACTTAA----GAAGCATGAGAAGATTCATATGTAAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1219334 376 + 1922530 TTAAGAACACATGAACAT----ATTTTAAGTTGGAGACTAAGC--TAAGGATATATGAATTTTATTTTTAAAATACCTTCTAAGCTAATATA------------------------------------------------------------------ACCATATACCTAAATATTAGGTGACTTCTG--TGCATGAGATATAAGTAGAAATGAGC-AAGGAGGAATT-CAAAGGATGTAAACAGTAAA----TAAGTTCAAACCTGATGCAATGTGAACTTGTCACTACTAGAAAACAACACAACTGTATTGTGCATAGAGTTTTCTTCTTCATCCTTATTTGATGAAATATCTGAAGTAGACACCTAT-AAAAAGTGAAATACACAAAACATGAAATTTTATTTTTCACTTATACTACACTTAACTGGAAACCTTGTGAAAATTCATACTCAAAA i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I e panPan2.chr7 155954423 1771 + 162613886 M a score=2019005.000000 s hg38.chrUn_KI270746v1 42938 257 + 66486 CATAT-A-TTTTTGCTAAGGTCTAGAATAACAATTCCAAA------TATTAATGCTAAGATAGTACTATAAAA--TGG--AGTCATGACATTTTATTA-TTCACCTAATTCTCTCTTTAGAGGTAGAATTCCTATAGACCAATAAGTAATGAGAAAATATAATAAACCTGTC-TTAG---TA-AGACTTGATTATGCA-GAATTCTAATCAAGAAACTA-----------TAAATGATAATATTATATGTATGTAC--------------------------ACACACAAATCTATCA--CTATTTTAATGACAC s panTro5.chr2A 90601697 261 + 111504155 CATAT-A-TTTTTGCTAAGGTCTAGAATAACAATTCCAAA------TATTAATGCTAAGATACTACAGCAAAA--TGG--AGTCATGACATTTTATTA-TTCAACTCATTCTCTCTTTAGAGGTAGAATTCCTTTAGACCAAGAAGTAATGAGAAAATATAATAAACCTGTC-TTAGGTCTATAGACTTGATTATGCA-GAATTCTAATCAAGAAACTA-----------TAAATGATAATATTATAGGTATGTAC--------------------------ACACACAAATCTATCA--CTATTTTAATGACAC i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826033 252 + 110113093 C--AT-A-TTTTTGCTAAGGTCTAGGATAACAATTCCAAA------TATTAATGCTAAGATACTACCGTAAAA--CGG--AGTCATGACATTTTATTA-TTCACCTAATTCTCTCTTTAGAGTTAGAATTCCTATAGACCAAGAAGTAATGAGAAAATATAATAAACCTGTC-TTAG---TA-AGACTTGGTTATGCA-GAATTCTAATCAAGAAACTA-----------TAAATGATAA---TATATGTATGTAC--------------------------ACATACAAATCTATCG--CTATTTTAGTGACAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178443890 262 + 185818997 CATAT-A-TTTTTGCCAAGGTCTAGAATAACAATTCCAAAT---ACTATTAATGCTAAAATACTACCATAAAA--TGG--AGTCATAACATTTTATTA-TTCACCTAATTCTCTCTTTAGAGGTAGAATTCCTATAGACCAAGAAGTAATGAGAAAATACAATAAACCTGTC-TTAG---CA-AGACTTGATCATGCA-GAATTCTAATCAAGAAACTA-----------TAAATGATAATATTATATGTATGTAC--------------------------ACACACAAATCTATCACTCTATTTTAGTGACAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184933621 262 + 192294377 CATAT-A-TTTTTGCCAAGGTCTAGAATAACAATTCCAAAT---ACTATTAATGCTAAAATACTACCATAAAA--TGG--AGTCATAACATTTTATTA-TTCACCTAATTCTCTCTTTAGAGGTAGAATTCCTATAGACCAAGAAGTAATGAGAAAATACAATAAACCTGTC-TTAG---CA-AGACTTGATCATGCA-GAATTCTAATCAAGAAACTA-----------TAAATGATAATATTATATGTATGTAC--------------------------ACACACAAATCTATCACTCTATTTTAGTGACAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7902160 262 + 15219753 CATAT-A-TTTTTGCCAAGGTCTAGAATAACAATTCCAAAT---ACTATTAATGCTAAAATACTACCATAAAA--TGG--AGTCATAACATTTTATTA-TTCACCTAATTCTCTCTTTAGAGGTAGAATTCCTATAGACCAAGAAGTAATGAGAAAATACAATAAACCTGTC-TTAG---CA-AGACTTGATCATGCA-GAATTCTAATCAAGAAACTA-----------TAAATGATAATATTATATGTATGTAC--------------------------ACACACAAATCTATCACTCTATTTTAGTGACAC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9546395 262 + 11639508 CATAT-A-TTTTTGCCAAGGTCTAGAATAACAATTCCAAAT---ACTATTAATGCTAAAATACTACCATAAAA--TGG--AGTCATAACATTTTATTA-TTCAACTAATTCTCTCTTTAGAGGTAGAATTCCTATAGACCAAGAAGTAATGAGAAAATACAATAAACCTGTC-TTAG---CA-AGACTTGATCATGCA-GAATTCTAATCAAGAAACTA-----------TAAATGATAATATGATATGTATGTAC--------------------------ACACACAAATCTATCACTCTATTTTAGTGACAC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120397957 262 + 127223203 CATGT-A-TTTTTGCCAAGGTCTAGAATAACAATTCCAAAT---ACTATTAATGCTAAAATACTACCATAAAA--TGG--AGTCATAACATTTTATTA-TTCACCTAATTCTCTCTTTAGAGGTAGAATTCCTATAGACCAAGAAGTAATGAGAAAATATAATAAACCTGTC-TTAG---CA-AGACTTGATCATGCA-GAATTCTAATCAAGAAACTA-----------TAAATGATAATAATATATATATGTAC--------------------------ACACACAAATCTATCACTCTATTTTAGTGACAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1524286 263 - 2854183 CATAT-A-TTTTTGCCAAGGTCTAGAATAACAATTCCAAAT---ACTATTAATGCTAAAATACTACCATAAAA--TGG--AGTCATAACATTTTATTATTTCAACTAATTCTCTCTTTAGAGGTAGAATTCCTATAGACCAAGAAGTAATGAGAAAATACAATAAACCTGTC-TTAG---CA-AGACTTGATCATGCA-GAATTCTAATCAAGAAACTA-----------TAAATGATAATATTATATGTATGTAC--------------------------ACACACAAATCTATCACTCTATTTTAGTGACAC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20230910 262 + 27496150 CATAT-A-TTTTTGCCAAGGTCTAGAATAACAATTCCAAAT---ACTATTAATGCTAAAATACTACCATAAAA--TTG--AGTCATAACATTTTATTA-TTCACCTAATTCTCTCTTTAGAGGTAGAATTCCTATAGACCAAGAAGTAATGAGAAAATATAATAAACCTGTC-TTAG---CA-AGACTTGATTATACA-GAATTCTAATCAAGAAACTA-----------TAAATGATAATATTATATGTATGTAC--------------------------ATACACAAATCTATCACTCTATTTTAGTGACAC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33680709 254 - 128169293 CATAT-A-TTTTTGCTAAGGTCTAGACTAACAATTCCAAAT---ATTATAAATGCTAAGATACTACTATAAAA--CAG--ACTCATGACATTTTATAA-TTCACCTAATTCTCTCTTTAGAGTTACAATTCCTATAGACCAAGAAGTAATGAGAAAAT---ATAAACTTGTCTTTAT---TA-AGACTTGATTACACA-GAATTCCAATCAAGACACTA-----------CAGATGAT------ATATGTGTGCAC--------------------------AAACATAAATCTATCACTCTATTTTAGTGACAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17018690 257 + 19594188 CATGT-A-TTTTTGCTAAGGTCTAGACTAACAATTCCAAAT---ATTATAAATGCTAAGATACTACCATAAAA--CAG--ACTTACGACATTTTATTA-TTCACCTAATTCTCTCTTTAGAGTTACAATTCCTATAGACCAAGAAGTAATGAGAAAAT---ATGAACTTGTCTTTAG---TG-AGACTTGATTACACA-GAATTCTAATCAAGACACTA-----------CAAATGATA---TCATATGTGTGTAC--------------------------ACACATAAATCTATCACTCTATTTTAGTGACAC i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4904155 257 - 11686629 CATAT-A-TTTTTGCTAAGGTCTAGACTAACAATTCCAAAT---ATTATAAATGCTAAGATACTACCATAAAA--CAG--ACTTATGACATTTTATTA-TTCACCTAATTCTCTCTTTAGAGTTACAATTCCTATAGACCAAGAAGTAATGAGAAAAT---ATAAACTTGTCTTTAG---TA-AGACTTGATTACACA-GAATTCTAATCAAGACACTA-----------CAAATGATA---TCATATGTGTGTAC--------------------------ACACATAAATCTATCACTCTATTTTAGTAACAC i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3255804 257 - 4527795 CATAT-A-TTTTTGCTAAGGTCTAGACTAACAATTCCAAAT---ATTAAAAATGCTAAGATACTACCATAAAA--CAG--ACTCAGGACATTTTATTC-TTCACCTAATTCTCTCTTTAGAGTTACAATTCCTATAGACCAAGAAGTAATGAGAAAAT---ATAAACTTGTCTTTAG---TA-AGACTTGATTATATA-GACTTCTAATCAAGACACTA-----------CAAATGATA---TCATATGTGTGTAC--------------------------ACACATAAATCTATCACTCTATTTTAGTGACAC i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16043351 293 + 59632846 --TACAA-CTTCTGCCAAGTCTCAGAGTAACAACTCCAAATTAGATTATCATTGCCAAGATAATATCATAAAG--GTGTAAGTCCTGACACTTCA----GTTACCTGAAG---TGAAGAGAGTTACAAGTCCCATAGATCAGGAC-CAATGAGAAAAT----TAAACCACCC-TTAA--TTA-GGACTTAATTAGCCA-TAAATTTTATGAAGAAACAAACAAAAGGAACTGTATTATATTTGTGTGTGTGTATACATATATACCACGACATACATATACCTACATATAATTCTAACACTCCATTCCAGTAACTC i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1219710 259 + 1922530 --TAC-AGTTTTTCCCAATGCCTATATTAACACTTATCAACTGGATTATTAATTCCAAGACACTACCATAAAATTTTA--AATCATGACATTTTAAAA-TTCATCCAATTGTCTCTTCAGAGTTACAAGTCCTGTAGATCAGGAAGTAATGGGAAAAT---ATATATCAGCCTTTAA---TA-AGGCTTGATTATCCataaattctaatttaaaaatta-----------ta----atatGTTTGTGTGTATATAT--------------------------ATATACACACATATCA--TGATTTTAGTGATAC i dasNov3.JH575209 C 0 I 27 e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5474813 335 - 12253515 I e panPan2.chr7 155954423 1771 + 162613886 M a score=480464.000000 s hg38.chrUn_KI270746v1 43195 59 + 66486 ACACTTGGGATCtgcaatgtagttagtctgaactgagatgtcctgcaaacataaaatac s panTro5.chr2A 90601958 59 + 111504155 ACACTTGGGATCtgcaatgtagttagtctgaactgagatgttctgcaaacataaaatac i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826285 59 + 110113093 ACACTTGGGATCtgcaatgtagctagtctgaactgagatgtcctgcaaacataaaatac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444152 59 + 185818997 ACACTTGGGATCTGCTGtgtagctagtctgaactgagatgtactgtaagcataaaatac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184933883 59 + 192294377 ACACTTGGGATCTGCTatgtagctagtctgaactgagatgtactgtaagcataaaatac i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7902422 59 + 15219753 ACACTTGGGATCTGCTatgtagctagtcttaactgagatgtactgtaagcataaaatac i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9546657 59 + 11639508 ACACTTGGGATCTGCTatgtagctagtctgaactgagatgtactgtaagcataaaatac i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120398219 59 + 127223203 ACACTTGGGATCTGCTatgtagctagtctgaactgagatgtactgtaagcataaaatac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1524549 59 - 2854183 ACACTTGGGATCTGCTatgtagctagtctgaactgagatgtactgtaagcataaaatac i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20231172 59 + 27496150 ACACTTGGGATCTGCTatgtagctagtctgaactgagatgtactgtaaacataaaatac i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33680963 59 - 128169293 ACACTTGGGATCtgcagtgtagctggtccaaactgagatgtcctgcaagcataaaatac i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17018947 59 + 19594188 ACACTTGGGATCtgcagtgtagctggtccgaactgagatgtcctgtaagcataaaatac i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4904412 59 - 11686629 ACACTTGGGATCtgcagtgtagctggtccgaactgagatgtcctgtaagcataaaatac i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3256061 59 - 4527795 ACACTTGGGATCTGCAAGGTAGCTGGTCCAAACTGAAATGTCCTGTAAGCATAAAATAC i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16043644 54 + 59632846 TCA-----Aacctgcaatcctgctagtcaaaactgagatgtgctagaagtataaaatac i canFam3.chr16 C 0 I 173 e dasNov3.JH575209 1219969 27 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5474813 335 - 12253515 I e panPan2.chr7 155954423 1771 + 162613886 M a score=238841.000000 s hg38.chrUn_KI270746v1 43254 32 + 66486 aGCACATAATTACATattacatgttgaaatgg s panTro5.chr2A 90602017 32 + 111504155 agcacataattacatattacatgttgaaatgg i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826344 32 + 110113093 aGCACATAATAACATattacatgttgaaatgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444211 32 + 185818997 aACACGTAAttatatattacatgttgaaatgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184933942 32 + 192294377 aACACGTAAttatatattacatgttgaaatgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7902481 32 + 15219753 aACACGTAAttatatattacatgttgaaatgg i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9546716 32 + 11639508 aACACGTAAttatatattacatgttgaaatgg i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120398278 32 + 127223203 aACACATAATTACATattacatgttgaaatgg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1524608 32 - 2854183 aacatgtaattatatattacatgttgaaatgg i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20231231 32 + 27496150 aacacctaattatatattacatgttgaaatgg i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33681022 32 - 128169293 aacacatgattacatattacatgttgaaatag i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17019006 32 + 19594188 aATACATAATTACATattacatgttgaaatag i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4904471 32 - 11686629 aACACATAATTACATattacatgttgaaataa i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3256120 32 - 4527795 AACACATAATTACATattacatgttgaaatag i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16043698 173 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5474813 335 - 12253515 I e panPan2.chr7 155954423 1771 + 162613886 M a score=427629.000000 s hg38.chrUn_KI270746v1 43286 57 + 66486 taatattttagatatatcg----aaatggaaggcattaaa--atta--attttgcctgttcacta------------- s panTro5.chr2A 90602049 61 + 111504155 taatattttagatatatcggtcaaaatggaaggcattaaa--atta--atttcacctgttcacta------------- i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826376 61 + 110113093 taatattttagatatatcggttgaaatggaaggcattaaa--atta--atttcgcctgttcacta------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444243 61 + 185818997 taatattttagatatatcagtcaaaatgaaaggcattaaa--atta--atttagcctgttcacta------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184933974 61 + 192294377 taatattttagatatatcagtcaaaatgaaaggcattaaa--atta--atttagcctgttcacta------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7902513 61 + 15219753 taatattttagatatatcagtcaaaatgaaaggcattaaa--atta--atttagcctgttcacta------------- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9546748 61 + 11639508 taatattttagatatatcagtcaaaatggaaggcattaaa--atta--atttagcctgttcacta------------- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120398310 60 + 127223203 taatattttagatatatca-tcaaaatggaaggcattaaa--atta--atttagcctgttcacta------------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1524640 61 - 2854183 taatattttagatgtatcagtcaaaatggaaggcattaaa--atta--atttagcctgttcacta------------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20231263 61 + 27496150 taatattttagatatatcagtcaaaatggaaggcattaaa--atta--atttagcttgttcccta------------- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33681054 61 - 128169293 taatattttagatatactggtcgaaatggaaggtattaaa--atta--attttgtctgttcacta------------- i calJac3.chr8 C 0 I 16 s saiBol1.JH378140 17019038 61 + 19594188 taatattttagatatactggtcgaaatggaaagcattaaa--atta--attttgtctgttcatta------------- i saiBol1.JH378140 C 0 I 11 s cebCap1.NW_016107335v1 4904503 61 - 11686629 taatatcttagatatactggtcaaaatggaagacattaaa--atta--attttgtctgttCACTA------------- i cebCap1.NW_016107335v1 C 0 I 24 s aotNan1.NW_018506100v1 3256152 61 - 4527795 taatattttagatatactggtagaaatggaaggcattaaa--atta--attttggctgttcacta------------- i aotNan1.NW_018506100v1 C 0 I 13 s otoGar3.GL873572 5475148 65 - 12253515 TAATATTATTGATGCC-------------AGGACACTAAATCATTATGATGTTTTTTATTCACCTACTTGTCtttctt i otoGar3.GL873572 I 335 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16043698 173 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e panPan2.chr7 155954423 1771 + 162613886 M a score=116397.000000 s hg38.chrUn_KI270746v1 43343 17 + 66486 taacc-----tttgttttgaga s panTro5.chr2A 90602110 22 + 111504155 taacctttattttgtttcgaga i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826437 22 + 110113093 taacctttattttgttttcagg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444304 22 + 185818997 taacctttattttgttttgaga i rheMac8.chr3 C 0 I 1 s macFas5.chr3 184934035 22 + 192294377 taacctttattttgttttgaga i macFas5.chr3 C 0 I 1 s macNem1.NW_012015910v1 7902574 22 + 15219753 taacctttattttgttttgaga i macNem1.NW_012015910v1 C 0 I 1 s cerAty1.NW_012008583v1 9546809 22 + 11639508 taacttttattttgttttgaga i cerAty1.NW_012008583v1 C 0 I 1 s chlSab2.chr21 120398370 22 + 127223203 taacctttattttgttttgaga i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012102765v1 1524701 22 - 2854183 taacctttattttgttttgaga i manLeu1.NW_012102765v1 C 0 I 1 s colAng1.NW_012115154v1 20231324 22 + 27496150 taacctttattttgttttgaga i colAng1.NW_012115154v1 C 0 I 1 s calJac3.chr8 33681131 17 - 128169293 -----tctttttttttctgaga i calJac3.chr8 I 16 I 1 s saiBol1.JH378140 17019110 17 + 19594188 -----tttttttttttctgaga i saiBol1.JH378140 I 11 I 1 s aotNan1.NW_018506100v1 3256226 17 - 4527795 -----tttttttttttctgaga i aotNan1.NW_018506100v1 I 13 I 1 s otoGar3.GL873572 5475213 17 - 12253515 -----tttttttttttttgaga i otoGar3.GL873572 C 0 I 1 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16043698 173 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e cebCap1.NW_016107335v1 4904564 24 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M a score=306391.000000 s hg38.chrUn_KI270746v1 43360 38 + 66486 ggagtttcactcttgttacccaggctggagtgtaatag s panTro5.chr2A 90602132 38 + 111504155 ggagtttcactcttgttgaccaggctggagtgtaatgg i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826459 38 + 110113093 ggagtttcgctcttgttgcccaggctggagtgtaatgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444327 38 + 185818997 ggagtttcactcttgttgcccaggctggagtgtaatgg i rheMac8.chr3 I 1 I 2 s macFas5.chr3 184934058 38 + 192294377 ggagtttcactcttgttgcccaggctggagtgtaatgg i macFas5.chr3 I 1 I 2 s macNem1.NW_012015910v1 7902597 38 + 15219753 ggagtttcactcttgttgcccaggctggagtgtaatgg i macNem1.NW_012015910v1 I 1 I 2 s cerAty1.NW_012008583v1 9546832 38 + 11639508 ggagtttcactcttgttgcccaggctggagtgtaatgg i cerAty1.NW_012008583v1 I 1 I 2 s chlSab2.chr21 120398393 38 + 127223203 ggagtttcactcttgttgcccagggtggagtgtaatgg i chlSab2.chr21 I 1 I 2 s manLeu1.NW_012102765v1 1524724 38 - 2854183 ggagtttcactcttgttgcccaggctggagtgtaatgg i manLeu1.NW_012102765v1 I 1 I 2 s colAng1.NW_012115154v1 20231347 38 + 27496150 ggagtttcactcttgttgcccaggctggagtgtaatgg i colAng1.NW_012115154v1 I 1 I 2 s calJac3.chr8 33681149 38 - 128169293 ggagtttcactcttgtagcccaggctggagtataatgg i calJac3.chr8 I 1 C 0 s saiBol1.JH378140 17019128 37 + 19594188 gg-gtttcacgcttgcagcccaggctggagtgtaatgg i saiBol1.JH378140 I 1 C 0 s cebCap1.NW_016107335v1 4904588 38 - 11686629 ggagtttcactcttgtagcccaggctggagtgtaatgg i cebCap1.NW_016107335v1 I 24 C 0 s aotNan1.NW_018506100v1 3256244 38 - 4527795 ggagtttcactcttgtagcccaggctggagggtaatgg i aotNan1.NW_018506100v1 I 1 C 0 s otoGar3.GL873572 5475231 37 - 12253515 agagcctcaagc-tatccccctgggtagagtgctatga i otoGar3.GL873572 I 1 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16043698 173 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e panPan2.chr7 155954423 1771 + 162613886 M a score=571.000000 s hg38.chrUn_KI270746v1 43398 2 + 66486 ca s panTro5.chr2A 90602170 2 + 111504155 cg i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826497 2 + 110113093 cg i nomLeu3.chr13 C 0 C 0 s calJac3.chr8 33681187 2 - 128169293 cg i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17019165 2 + 19594188 cg i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4904626 2 - 11686629 cg i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3256282 2 - 4527795 ca i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5475268 1 - 12253515 c- i otoGar3.GL873572 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16043698 173 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e colAng1.NW_012115154v1 20231385 2 + 27496150 I e manLeu1.NW_012102765v1 1524762 2 - 2854183 I e chlSab2.chr21 120398431 2 + 127223203 I e cerAty1.NW_012008583v1 9546870 2 + 11639508 I e macNem1.NW_012015910v1 7902635 2 + 15219753 I e rheMac8.chr3 178444365 2 + 185818997 I e panPan2.chr7 155954423 1771 + 162613886 M e macFas5.chr3 184934096 2 + 192294377 I a score=902825.000000 s hg38.chrUn_KI270746v1 43400 118 + 66486 tgatctcagctcgttgcaacctctgcctcctgg-ttcaagctgttctccctgcctcagcctcccaagtagctgggattacagttgtccaccaccatgcccagctaatttctgtattttt s panTro5.chr2A 90602172 118 + 111504155 cgatctcggctcgttgcaacctctgcctcctgg-ttcaagctgttctccctgactcagcctcccaagtagctgggattacagttgtccaccaccatgcccagctaatttctgtattttt i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826499 117 + 110113093 tgatctcggctcactgcaacctctgcctcctgg-tttaagctattct-cctgcctcagccttccaagtagctgggattacagttgtctaccaccatgcccagctaatttctgtattttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444367 117 + 185818997 caatctcggctcactgcaacctcagcctcccga-ttcaagctattct-cctgcctcagcctcccaagtagctgggatcacaagtgtccaccaccacacccagctaatttttgtattttt i rheMac8.chr3 I 2 C 0 s macFas5.chr3 184934098 117 + 192294377 caatctcggctcactgcaacctcagcctcccga-ttcaagctattct-cctgcctcagcctcccaagtagctgggatcacaagtgtccaccaccacacccagctaatttttgtattttt i macFas5.chr3 I 2 C 0 s macNem1.NW_012015910v1 7902637 117 + 15219753 caatctcggctcactgcaacctcagcctcccga-ttcaagctattct-cctgcctcagcctcccaagtagctgggatcacaggtgtccaccaccacacccagctaatttttgtattttt i macNem1.NW_012015910v1 I 2 C 0 s cerAty1.NW_012008583v1 9546872 117 + 11639508 caatctcggctcactgcaacctcagcctcccga-ttcaagctattct-cctgcctcagcctcccaagtagctgggatcaccggtgtccaccaccacacccagctaatttttgtattttt i cerAty1.NW_012008583v1 I 2 C 0 s chlSab2.chr21 120398433 117 + 127223203 caatctcggctcactgcaacctcagcctcccag-ttcaagctattct-cctgcctcagtttcccaagtagctgggattacaggtgtccgccaccacacccagctaatttttgtattttt i chlSab2.chr21 I 2 C 0 s manLeu1.NW_012102765v1 1524764 117 - 2854183 caatctcggctcactgcaacctcagcctcccga-ttcaagctattct-cctgcctcagcctcccaagtagctgggatcacaggtgtccaccaccacacccagctaatttttgtattttt i manLeu1.NW_012102765v1 I 2 C 0 s colAng1.NW_012115154v1 20231387 117 + 27496150 cgatctcagctcactgcaacctccgcctcccgg-ttcaagctattct-cctacctcagcctcccaagtagctgggattacaggtgtccaccaccatacccagctactttttgtattttt i colAng1.NW_012115154v1 I 2 C 0 s calJac3.chr8 33681189 118 - 128169293 tgatctcagctcaatgcaacctctgcctcctggattcaaacaattcc-cctgcctcgggctcccaagtagctggtatgacaggcatccaccaccatgtccagctaatttttgtattttt i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17019167 118 + 19594188 tgatctcggttcaatgcaacctctgcctcctgggttcaagcgattct-cctccctccggctcccaagtagctggtattacaggcatccaccaccgtgcccagctaatttttgtattttt i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4904628 118 - 11686629 tgatctcagttcaatgcaacctctgcctcctgggttcaagcgattct-cctccctcgggctcccaagtagctggtattacaggcatccaccaccatgcccagctaatttttgtattttt i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3256284 118 - 4527795 cgatcttggctcaatgcaacctctgcctcctgggttcaagcaattct-cctcccttgggctcccaagtagctggtattacaggtgcccaccaccatgcccagctaatttttgtattttt i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5475269 116 - 12253515 --atcacagctcacagcaacctccaactcctgggctcaagcgagtct-cctgcctcagcctcccaagtagctgggatcacacgcaccagccacaatgcctagttatttttttttttttt i otoGar3.GL873572 C 0 I 562 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16043698 173 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e panPan2.chr7 155954423 1771 + 162613886 M a score=468585.000000 s hg38.chrUn_KI270746v1 43518 65 + 66486 agtagagacggggtttcaccatattggtcaggctggtctcttaactcctgacctcaaatgatcca s panTro5.chr2A 90602290 65 + 111504155 agtagagacggggtttcaccatattggtcagggtggtctcttaactcctgacctcaaatgatcca i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826616 64 + 110113093 tgtagaaatggggcttcaccatattggtcgggctggtctc-taactcctgacctcaaatgaccca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444484 64 + 185818997 cgtagagatggggtttcacaatgttggtcaggctggtctc-taactcctgacctcaagtgatcca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184934215 64 + 192294377 cgtagagatggggtttcacaatgttggtcaggctggtctc-taactcctgacctcaagtgatcca i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7902754 64 + 15219753 cgtagagatggggtttcacaatgttggtcaggctggtctc-taactcctgacctcaagtgatcca i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9546989 64 + 11639508 agtagagacggggtttcacaatgttggtcaggctggtctc-taactcctgacctcaagtgatcca i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120398550 64 + 127223203 agtagagatggggtttcacgatgttggtcaggctggtctc-taactcctgacctcaagtgatcca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1524881 64 - 2854183 agtagagatggggtttcacaatgttggtcaggctggtctc-taactcctgacctcaagtgatcca i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20231504 64 + 27496150 agtagagatggggtttcacgatgttggtcaggctggtctc-taactcctgacctcaagtgatcca i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33681307 64 - 128169293 agtagaaatggagtttcaccatattggccaggctagtctc-aaactcctgacctcaagtgatcca i calJac3.chr8 C 0 I 311 s saiBol1.JH378140 17019285 64 + 19594188 agtagaaacggagtttcaccatgttggccaggctggtctc-aaactcctgacctcaagtgatcca i saiBol1.JH378140 C 0 I 312 s cebCap1.NW_016107335v1 4904746 64 - 11686629 agtagaaacggagtttcaccatgttggccaggctggtctc-aaactcctgacctcacgtgatcca i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3256402 64 - 4527795 agtagaaacagagtttcaccatgttggccaggctgctctc-aaactcctgacctcaagtgatcca i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16043698 173 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5475385 562 - 12253515 I e panPan2.chr7 155954423 1771 + 162613886 M a score=9100.000000 s hg38.chrUn_KI270746v1 43583 1 + 66486 c s panTro5.chr2A 90602355 1 + 111504155 c i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826680 1 + 110113093 c i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444548 1 + 185818997 c i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184934279 1 + 192294377 c i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7902818 1 + 15219753 c i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9547053 1 + 11639508 c i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120398614 1 + 127223203 c i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1524945 1 - 2854183 c i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20231568 1 + 27496150 c i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33681682 1 - 128169293 c i calJac3.chr8 I 311 C 0 s saiBol1.JH378140 17019661 1 + 19594188 c i saiBol1.JH378140 I 312 C 0 s cebCap1.NW_016107335v1 4904810 1 - 11686629 c i cebCap1.NW_016107335v1 C 0 I 4503 s aotNan1.NW_018506100v1 3256466 1 - 4527795 c i aotNan1.NW_018506100v1 C 0 I 323 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16043698 173 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5475385 562 - 12253515 I e panPan2.chr7 155954423 1771 + 162613886 M a score=20207.000000 s hg38.chrUn_KI270746v1 43584 7 + 66486 tgcaccc- s panTro5.chr2A 90602356 7 + 111504155 tgcaccc- i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826681 7 + 110113093 tgcaccc- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444549 7 + 185818997 tgcgccc- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184934280 7 + 192294377 tgcgccc- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7902819 7 + 15219753 tgcgccc- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9547054 7 + 11639508 tgcgccc- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120398615 7 + 127223203 tgtgccc- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1524946 7 - 2854183 tgcgccc- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20231569 7 + 27496150 tgcgccc- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33681683 6 - 128169293 --agcctt i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17019662 6 + 19594188 --agcctt i saiBol1.JH378140 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16043698 173 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5475385 562 - 12253515 I e aotNan1.NW_018506100v1 3256467 323 - 4527795 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M a score=30330.000000 s hg38.chrUn_KI270746v1 43591 5 + 66486 agctc s panTro5.chr2A 90602363 5 + 111504155 agctc i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826688 5 + 110113093 agctc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444556 5 + 185818997 agctc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184934287 5 + 192294377 agctc i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7902826 5 + 15219753 agctc i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9547061 5 + 11639508 agctc i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120398622 5 + 127223203 agctc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1524953 5 - 2854183 agctc i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20231576 5 + 27496150 agctc i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33681689 5 - 128169293 ggccc i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17019668 5 + 19594188 ggccc i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3256790 5 - 4527795 ggccc i aotNan1.NW_018506100v1 I 323 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16043698 173 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5475385 562 - 12253515 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M a score=51967.000000 s hg38.chrUn_KI270746v1 43596 7 + 66486 attgtaa s panTro5.chr2A 90602368 7 + 111504155 actgtaa i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826693 7 + 110113093 actgtaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444561 7 + 185818997 actgtaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184934292 7 + 192294377 actgtaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7902831 7 + 15219753 actgtaa i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9547066 7 + 11639508 actgtaa i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120398627 7 + 127223203 actgtaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1524958 7 - 2854183 actgtaa i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20231581 7 + 27496150 actgtaa i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33681694 7 - 128169293 actgtaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17019673 7 + 19594188 actgtaa i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3256795 7 - 4527795 actgtaa i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5475947 7 - 12253515 ataataa i otoGar3.GL873572 I 562 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16043698 173 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M a score=1145807.000000 s hg38.chrUn_KI270746v1 43603 151 + 66486 cttattaatgtggttactaggaagttttaaggtgcatatgtggttctcattatatttctatta----gcaccgctTTAGAATATTATTTTGAATAA--CATCAAAATTTCAGTATTAGCCAAATGATTATCAACCAATATTGTTCA-GTCTGGGCTTA s panTro5.chr2A 90602375 151 + 111504155 ctttttaatgtggctactaggaagttttaaattgcatatgtggtactcattatatttctatta----gcaccgctTTAGAATATTATTTTGAATAA--CATCCAAATTTCAGTATCAGCCAAATGATTATCAACCAATATTGTTCA-GTCTGGACTTA i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826700 151 + 110113093 ctttttaatgtggctaccaggaagttttaaattgcatatgtggttctcattatatttctatta----gcaccactTTAGAATATTATTTTGAATAA--CATCAAAATTTCAGTATTAGCCAAATGATTATCAACCAATATTGTTCA-GTCTGGACTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444568 150 + 185818997 ctttttaacgtggctactaggaagttttaaattgcatatgtggttctcattatatttctatta-----tacCACTTTAGAATATTATTTTGAATAA--TATCAAAATTTCAGTATTATCCAAATGATTATCAACCAATATTGTTGA-GTCTGGACTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184934299 150 + 192294377 ctttttaacgtggctactaggaagttttaaattgcatatgtggttctcattatatttctatta-----tacCACTTTAGAATATTATTTTGAATAA--TATCAAAATTTCAGTATTATCCAAATGATTATCAACCAATATTGTTGA-GTCTGGACTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7902838 150 + 15219753 ctttttaacgtggctactaggaagttttaaattgcatatgtggttctcattatatttctatta-----tacCACTTTAGAATATTATTTTGAATAA--TATCAAAATTTCAGTATTATCCAAATGATTATCAACCAATATTGTTCA-GTCTGGACTTA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9547073 150 + 11639508 ctttttaacgtggctactaggaagttttaaattgcatatgtggttctcattatatttctatta-----tacCACTTTAGAATATTATTTTGAATAA--TATCAAAATTTCAGTATTATCCAAATGATTATCAACCAATATTGTTCA-GTCTGGACTTA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120398634 150 + 127223203 ctttttaacgtggctactaggaagttttaaattgcatatgtggttctcattatatttctatta-----tacCACTTTAGAATATTATTTTAAATAA--TATCAAAATTTCAGTATTATCCAAATGATTATCAACCAACATTGTTCA-GTCTGGACTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1524965 150 - 2854183 ctttttaatgtggctaccaggaagttttaaattgcatatgtggttctcattatatttctatta-----tacCACTTTAGAATATTATTTTGAATAA--TATCAAAATTTCAGTATTATCCAAATGATTATCAACCAATATTGTTCA-GTCTGGACTTA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20231588 149 + 27496150 ctttttaacgtggctacta-gaagttttaaattgcatatgtggttctcattatatttctatta-----tacCACTTTAGAATATTATTTTGAATAA--TATCAAAATTTCAGTATTATCCAAATGATTATCAACCAATATTGCTCA-GTCTGGACTTA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33681701 151 - 128169293 ctttttaacgtggctactagaaaatttcaaattgcatatgtagttctcattatatttctatta----gCACCATTTTAGAATATTATTTTGAATAA--CATCAAAATTTCATTATTACCCAAATGATCATCCACTACTATTGTTCA-GTCTGGACTTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17019680 151 + 19594188 ctttttaatgtggctactagaaagtttcaaattgcatatgtggttctcattatatttctgtta----gCACCATTTTAGAATATTACTTTGAATAA--CACCAAAATTTCATTATTACCCAAATGATTACCAACCACTATTGTTCA-CTCAGGACTTA i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3256802 151 - 4527795 ctttttaatgtggctactagaaagtttgaaattgcatatgtggttctcattagatttctatta----gCACCATTTTAGAATATTATTTTGAATAA--TGTCAAAATTTCATTATTACCCAAATGATTATCAACCACTATTGTTCA-GTCTGGACTTA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5475954 147 - 12253515 ctttttagcatggctactagaacgtttgaaattaaacatg--gttcctactatacttctattagactgcactgCTTTAGAATATTATTTTGAATAA-----CAAAATTTCAGTATTACCCAAAGGATTATCATGCACAGGTGTT----TCTGAACTTA i otoGar3.GL873572 C 0 I 844 s canFam3.chr16 16043871 154 + 59632846 ttttttaatgtagctat---aaagttttaaattgcatatgtgatataca-tatacttcttttggacagcaccgCTTTGAAATATTATTTTGAATAATGTATCAAAATTTCAGTCTTAGCCAAAAGATTACCAGCCATAGATACCTATTTCTGGACTTA i canFam3.chr16 I 173 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M a score=1707549.000000 s hg38.chrUn_KI270746v1 43754 257 + 66486 GTTCTATTTGACTAAATCAACTAAATACCCACTGGTTTGTTAATA---ATTTCTAGAGTG---ATTATGAAACAAAATAA----AGCTCTGAACTAGAAGTTGTAGAAGAAGACAAGGAGGGCACTGCCAAAATCATAAAATACAATCCTCTTTCTTTAAA--AAGCTTACAATCGAAGCCTGGAAAGAC--AGTTGAAACACAACAGGTTATGTTCAAGGTCAAAACATAATACAAC----TGAATTACTTTTCTTGAGGAACAACTGAAAGAA s panTro5.chr2A 90602526 177 + 111504155 GTTCTATTTGACTAAATCAACTAAGTAGCCACTGGTTTGTTAATA---ATTTCTAGAGTG---ATTATGAAACAAAATAA----AGCTCTGAACTAGAAGTTGTAGAAGAAGACAAGGAGGGCACTGCCAAAATCATAAAATACAATCCTCTTTCTTTAAA--AAGCTTACAACCGAAGCCTGGAAAGA-------------------------------------------------------------------------------------- i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102826851 259 + 110113093 GTTCTATTTGACTAAATCGGCTAAGTACCCACTGGTTTGTTAATA---ATTTCTAGAGTG---ATTATGAAACAAAATAA----AGCTCTGAACTAGAAGCTGTAGAAGAAGACAAGGAGGGCACTGCCAAAATCATAAAATACAATCCTCTTTCTTTAAA--AAGCTTACAACCTAAGCCTGGAAAGACAGAGCTGAAACACAACAGGTTATGTTCAAGGTCAAAACATAAAACAAC----TTAATTACTTTTCCTGAGGAACAACTGAAAGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444718 259 + 185818997 GTTCTATTTGACTACATCAACTAAGTACCCACTGGTTTGTTACTA---ATTTCTAGAGTG---ATTATGAAACAAAATaa----agctctgaactagaagttgtagaagaagacaaggaggacagtgccaaaatcataaaatacaatcctctttctttaaa--aagcttacaacctaagcctggaaagacagagttgaaacacAACAGGTTATGTTCAAGGTCAAAACATAAAACAAT----AGAATTACTTTTCTTGAGGAACAACTGAAAGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184934449 259 + 192294377 GTTCTATTTGACTACATCAACTAAGTACCCACTGGTTTGTTACTA---ATTTCTAGAGTG---ATTATGAAACAAAATAA----AGCTCTGAACTAGAAGTTGTAGAAGAAGACAAGGAGGACAGTGCCAAAATCATAAAATACAATCCTCTTTCTTTAAA--AAGCTTACAACCTAAGCCTGGAAAGACAGAGTTGAAACACAACAGGTTATGTTCAAGGTCAAAACATAAAACAAT----AGAATTACTTTTCTTGAGGAACAACTGAAAGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7902988 259 + 15219753 GTTCTATTTGACTACATCAACTAAGTACCCACTGGTTTGTTACTA---ATTTCTAGAGTG---ATTATGAAACAAAATaa----agctctgaactagaagttgtagaagaagacaaggaggacagtgccaaaatcataaaatacaatcctctttctttaaa--aagcttacaacctaagcctggaaagacagagttgaaacacAACAGGTTATGTTCAAGGTCAAAACATAAAACAAT----AGAATTACTTTTCTTGAGGAACAACTGAAAGAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9547223 259 + 11639508 GTTCTATTTGACTACATCAACTAAGTACCCACTGGTTTGTTACTA---ATTTCTAGAGTG---ATTATGAAACAAAATaa----agctctgaactagaagttgtagaagaagacaaggaggacagtgccaaaatcataaaatacaatcctctttctttaaa--aagcttacaacctaagcctggaaagacagagttgaaacacAACAGGTTATGTTCAAGGTCAAAACATAAAACAAT----AGAATTACTTTTCTTGAGAAACAACTGAAAGAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120398784 259 + 127223203 GTTCTATTTGACTACATCAACTAAGTACCCACTGGTTTGTTACTA---ATTTCTAGAGTG---ATTATGAAACAAAATAA----AGCTCTGAATTAGAAGCTGTAGAAGTAGACAAGAAGGGCAGTGCCAAAATCATAAAATACAATCCTCTTTCTTTAAA--AAGCTTACAACCTAAGCCTGGAAAGACAAAGTTGAAACACAACAGGTTATGTTCAAGGTCAAAACATAAAACAAT----AGAATTACTTTTCTTGAGGAACAACTGAAAGAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1525115 259 - 2854183 GTTCTATTTGACTACATCAACTAAGTACCCACTGGTTTGTTACTA---ATTTCTAGAGTG---ATTATGAAACAAAATaa----agctctgaactagaagttgtagaagaagacaaggaggacagtgccaaaatcataaaatacaatcctctttctttaaa--aagcttacaacctaagcctggaaagacagagttgaaacacAACAGGTTATGTTCAAGGTCAAAACATAAAACAAT----AGAATTACTTTTCTTGAGGAACAACTGAAAGAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20231737 259 + 27496150 CTTCTATTTGACTACATCAACTAAGTACCCACTGGTTTGTTACTA---ATTTCTAGAGTG---ATTATGAAACAAAATAA----AGCTCTGAATTAGAAGTTGTAGAAGAAGACAAGGAGGGCAGTGCCAAAATCATAAAATACAATCCTCTTTCTTTAAA--AAGCTTACAACCTAAGCCTGAAAAGACAGAGTTGAAACACAACAGGTTATGTTCAAGGTCAAAACATAAAACAAT----AGAATTACTTTTCTTGAGGAACAACTGAAAGAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33681852 267 - 128169293 GTTCTATTTGACTAAATCAACTAAGTACCCACTGACTTGTTAATA---ATTTCTAGAATG---ATTATGAAACAAACAAAAAGCAGCTCTGAATTAGAAGTTGCAGAAGAGGACAAGGAGGGCACTGTCAGAATCATAAAATGCAATCCTCTTTCTTTACA--AAGCTTACAACCTAAGCCTCGAAAGACAGAGTTAAAACATAACAGGTTATGTTCACGGTCAAAACATAAAACAAGGTCAAGAACTATCTTTCTTGAGGAATAACTGAAAGAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17019831 267 + 19594188 GTTCTATTTGACTAAATCAACTAAGTACCCACTGACTTGTTAATA---ATTTCTAGAGTG---ATTATGAAAAAAACAAAAAGCAGCTCTGAATTGGAAGTTGCAGAAGAGGACAAGGAGGGCACTGACAAAATCATAAAATGCAATCCTCTTTCTTTAGA--CAGCTTACAACCTAAGCCTGGAAAGACAGAGTTAAAACATAACAGGTTATGTTCAAGGTCAAAACATAAAACAAGGTCAAGAATTACTTTTCTTGAGGAATAACTGAAAGAA i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3256953 267 - 4527795 GTTCTATTTGACAAAATCAACTAAGTACCCACTGACTTGTTAATA---ATTTCTAGAGTG---ATTATGAAACAAACAAAAAGCAGCTCTGAATTAGAAGTCGCAGAAGAGGACAAGGAGGGCACTGCCAAAATCATAAAATTCAATCCTCTTTCTTTAGA--AAGCTTACAACCTAAGCCTGGAAAGACAGAGTTAAAACATAACAGGTTATGTTCAAGGTAAAAACATAAAACAAGGTCAAGAATTACTTTTCTTGAGGAATAACTGAAAGAA i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16044025 253 + 59632846 GCTAAATTTCACCAAATCAACTAAGTACCCATTGTCTTGTTAATAATTATTTCCAGAATGCTTATTATGAAA------AG----AGCTCTAAATTTGTTGCTA-AAAAGAGAACAGGGAGACCAATGCCAAAATTTtaaaatatgtttctcttcccttaaagtaagcttacaatct-agcctggaaggacagacatgaaacataataggttaagttc------aaaataaaaagtaAT----AGTATTGTTGTTCTTGAGGAATGACTGAAAGAA i canFam3.chr16 C 0 I 49 e dasNov3.JH575209 1219969 27 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M a score=238421.000000 s hg38.chrUn_KI270746v1 44011 42 + 66486 GATT-AACCAgctgggtgtggtggctcatgcttataatcttag s panTro5.chr2A 90602703 35 + 111504155 --------CAgctgggtgtggtggctcatgcctataatcttag i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102827110 42 + 110113093 GATT-AACCAgctgggtgtggtggctcatgcctataatcttag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178444977 42 + 185818997 GATT-AACCAgctgggtgtggtggctcatgtctataatcctag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184934708 42 + 192294377 GATT-AACCAgctgggtgtggtggctcatgtctataatcctag i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7903247 42 + 15219753 GATT-AACCAgctgggtgtggtggctcatgtctataatcctag i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9547482 42 + 11639508 GATT-AACCAgctgggtgtggtggctcatgtctataatcctag i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120399043 42 + 127223203 GATT-AACCAgctgggtgtggtggctcatgtctataatcctag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1525374 42 - 2854183 GGTT-AACCAgctgggtgtggtggctcatgtctataatcctag i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20231996 42 + 27496150 GATT-AACCAgctgggtgtggtgactcatgtctataatcctag i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33682119 43 - 128169293 AATTAAACCAGCTGGGTGAGGTGACTCATGCCTTTAAATCTAC i calJac3.chr8 C 0 I 303 s saiBol1.JH378140 17020098 43 + 19594188 GATTAAACCggctgggtgaggtgactcatgcctttaaacctac i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3257220 43 - 4527795 GATTAAACCggctgggtgaggtgactcatgcctttaaacctac i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M a score=1570462.000000 s hg38.chrUn_KI270746v1 44053 262 + 66486 cactttgggaggctaaagtgggtggattgcttgagctcaggagttcgagacaagcctgggcaacatggtgaaatcctgtctctaccaaaaatgc-aaaaaa--cagccgagcatggtggcacacg--cctgtagtctcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcagaggttacagtgagccaagattatgccactgcactacaggctgggggacagagcg--------------------------------------------agaccctgtctcccaaaa------aaaaaaaa s panTro5.chr2A 90602738 262 + 111504155 cactttgggaggctaaagtgtgtggatcgcttgagctcaggagttcgagaccagcctgggcaacatggtgaaatcctgtctctaccaaaaatac-aaaaaa--cagccgagcgtggtggcacacg--cctgtagtctcagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcagaggtttcagcgagccaagattacgccactgcactccagcctgggtgacagaggg--------------------------------------------agaccctgtctcaaaaaa------aaaaaaaa i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102827152 308 + 110113093 cactttgggaggctaaagtgggtggatcgcttgagctcaggaattcgagaccagcctgggcaacacggtgaaatcctgtctctaccaaaaatac-aaaaaaagcagccgagcgtggtggcacacg--cctgtagtctcagctactcaggaggctgaggcaggagaatcacttgaacccaagaggcagaggttacagtgagccaagattatgccactgcactacagcctgggtgacagagcgagacCAAgattacgccactgcactccagcctgggtgacagagttagaccctgtctccacaaa------aaaaaaaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178445019 262 + 185818997 cactttaggaggctgaagtgggtggatcgcttgagctcaggagttcaagaccagcctgggcaacgtggtgaaatcccgtctctaccaaaaatac-aaaaaa--tagccaagcgtggtggcacatg--cctgtagtctcagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcagaggttacagtgagccaagattacaccatggcactccagcctgggtgacagagca--------------------------------------------agaccctatctccaaaaa------aaaaaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184934750 262 + 192294377 cactttaggaggctgaagtgggtggatcgcttgagctcaggagttcaagaccagcctgggcaacgtggtgaaatcccgtctctaccaaaaatac-aaaaaa--tagccaagcgtggtggcacacg--cctgtagtctcagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcagaggttacagtgagccaagattacaccatggcactccagcctgggtgacagagca--------------------------------------------agaccctatctccaaaaa------aaaaaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7903289 262 + 15219753 cactttaggaggctgaagtgggtggatcgcttgagctcaggagttcaagaccagcctgggcaacgtggtgaaatcccgtctctaccaaaaatac-aaaaaa--tagccaagcatggtggcacacgcacctgtagtctcagctacttaggaggctgaggcaggagaatcacttgaaccc-ggaggcaga-attacagtgagccaagattacaccactgcacttcagcctgggtgacagagca--------------------------------------------agaccctatctccaaaaa------aaaaaaaa i macNem1.NW_012015910v1 C 0 I 194 s cerAty1.NW_012008583v1 9547524 262 + 11639508 cactttaggaggctgaagtgggtggatcgcttgagctcaggagttcaagaccagcctgggcaacgtggtgaaatcccgtctctaccaaaaatac-aaaaaa--tagccaagcgtggtggcacacg--cctgtagtctcagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcagaggttacagtgagccaagattacaccactgcactccagcctgggtgacagagca--------------------------------------------agatcctatctccaaaaa------aaaaaaaa i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120399085 262 + 127223203 cactttaggaggctgaagtgggtggatcgcttgagctcaggagttcaagaccagcctgggcaacatggtgaaatcccgtctctaccaaaaatac-aaaaaa--tagccaagcgtggtggcacacg--cctgtagtctcagctactcaagaggctgaggcaggagattcacttgaacccgggaggcagaggttacagtgagccaagatgacaccactgtactccagcctgggtgacagagcg--------------------------------------------agaccctatctccaaaaa------aaaaaaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1525416 262 - 2854183 cactttaggaggctgaagtgggtggatcgcttgagctcaggagttcaagaccagcctgggcaacgtggtgaaatcccgtctctaccaaaaatac-aaaaaa--tagccaagcgtggtggcacacg--cctgtagtctcagctactcaggaggctgaggcaggagaatcacttgaactcgggaggcagaggtcacagtgagccaagattacaccactgcactccagcctgggtgacagagca--------------------------------------------agaccctatctccaaaaa------aaaaaaaa i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20232038 263 + 27496150 cactttaggaggctgaagtgggtggatcgcttgagctcaggagttcaagaccagcctgggcaaggaggtgaaatcccgtctctaccaaaaatacaaaaaaa--tagccaagcgtggtggcacacg--cctgtagtctcagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcagaggttacagtgagccaagattacaccactgcactccagcctgggtgacagagcg--------------------------------------------agaccctatctccaaaaa------aggaagaa i colAng1.NW_012115154v1 C 0 I 31 s calJac3.chr8 33682465 259 - 128169293 cactttgggaggctaaggtggatggatcacttgagctcagaagttcaagaccagcctgggcaacatggtaaaaccccatctctcccaaaaatac-aaatat--tagccaggcatgctaccacacg--ccagtagtctcagatactcataaggctgaggcaggagaatcacttgaacctgggaggcagaggttacactgagca------acgtcactgcactccagcctgggtgacagagcg--------------------------------------------agaccctatctcaaaaaa--aaacaaaaaga- i calJac3.chr8 I 303 C 0 s saiBol1.JH378140 17020141 251 + 19594188 cactttgggagtctaaggtgggtggatcacctgagctcagaagttcgagaccagcctgggcaacatggtgaaaccctgtctctcccaaaaatat-aaaaat--tagccaggcatgctaccacatg--cctatagtctcaggtactcagaaggctgagtcacgagaatcactcgaacccaggaggcagagattacactgagcc------acatcactgcactccagcctgggtgacagagca--------------------------------------------agaccctatctcag----------aaaaaga- i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3257263 261 - 4527795 cactctgggaggctaaggtgggtggatcacttgagctcagaagttcgagaccagcctgggcaacatggtgaagccccgtctctccccaaaatac-aaaaat--tagccaggcatgctaccacacg--cctgtagtctcaggtactcagaaggctgagtcaggagaatgacctgaactcgggaggcagaggttacactgagct------gcgtcactgcactccagcctgggtgacagagcg--------------------------------------------agaccctatctcaaaaaaagaaagaaaaaga- i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M a score=-9820.000000 s hg38.chrUn_KI270746v1 44315 1 + 66486 -a s panTro5.chr2A 90603000 1 + 111504155 -a i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102827460 1 + 110113093 -a i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178445281 1 + 185818997 -a i rheMac8.chr3 C 0 I 118 s macFas5.chr3 184935012 1 + 192294377 -a i macFas5.chr3 C 0 I 1 s cerAty1.NW_012008583v1 9547786 1 + 11639508 -a i cerAty1.NW_012008583v1 C 0 I 122 s chlSab2.chr21 120399347 1 + 127223203 -a i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1525678 1 - 2854183 -G i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20232332 1 + 27496150 -a i colAng1.NW_012115154v1 I 31 I 1 s calJac3.chr8 33682724 1 - 128169293 c- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17020392 1 + 19594188 c- i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3257524 1 - 4527795 c- i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e macNem1.NW_012015910v1 7903551 194 + 15219753 I e panPan2.chr7 155954423 1771 + 162613886 M a score=-8771.000000 s hg38.chrUn_KI270746v1 44316 2 + 66486 -aa s panTro5.chr2A 90603001 2 + 111504155 -aC i panTro5.chr2A C 0 C 0 s ponAbe2.chr7_random 5726216 2 - 19039424 -aa i ponAbe2.chr7_random N 0 N 0 s nomLeu3.chr13 102827461 2 + 110113093 -aa i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184935014 1 + 192294377 -a- i macFas5.chr3 I 1 I 18 s chlSab2.chr21 120399348 1 + 127223203 -a- i chlSab2.chr21 C 0 I 123 s manLeu1.NW_012102765v1 1525679 1 - 2854183 -a- i manLeu1.NW_012102765v1 C 0 I 18 s colAng1.NW_012115154v1 20232334 1 + 27496150 -g- i colAng1.NW_012115154v1 I 1 C 0 s calJac3.chr8 33682725 2 - 128169293 aa- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17020393 2 + 19594188 aa- i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3257525 2 - 4527795 aa- i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e cerAty1.NW_012008583v1 9547787 122 + 11639508 I e macNem1.NW_012015910v1 7903551 194 + 15219753 I e rheMac8.chr3 178445282 118 + 185818997 I e panPan2.chr7 155954423 1771 + 162613886 M a score=21723.000000 s hg38.chrUn_KI270746v1 44318 22 + 66486 aaaaaaGGAAGGAAGTTTGGTT s panTro5.chr2A 90603003 22 + 111504155 GAGGAAAGAAGGAAGGTTGGTT i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102827463 22 + 110113093 aaagaaGGAAGGAAGGTAGATT i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184935033 22 + 192294377 acagaaggaaggaagttaggac i macFas5.chr3 I 18 I 72 s manLeu1.NW_012102765v1 1525698 22 - 2854183 acagaaggaaggaagttaggac i manLeu1.NW_012102765v1 I 18 I 68 s colAng1.NW_012115154v1 20232335 22 + 27496150 aaggaaggtaggaaggtaggta i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33682727 14 - 128169293 agaaagagaaAGAA-------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17020395 14 + 19594188 agaaagagaaagaa-------- i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3257527 14 - 4527795 agaaaaGGAAAGAA-------- i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e chlSab2.chr21 120399349 123 + 127223203 I e cerAty1.NW_012008583v1 9547787 122 + 11639508 I e macNem1.NW_012015910v1 7903551 194 + 15219753 I e rheMac8.chr3 178445282 118 + 185818997 I e panPan2.chr7 155954423 1771 + 162613886 M a score=1079.000000 s hg38.chrUn_KI270746v1 44340 4 + 66486 G-GTT s panTro5.chr2A 90603025 5 + 111504155 GTACT i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102827485 4 + 110113093 G-GTT i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184935127 4 + 192294377 g-gca i macFas5.chr3 I 72 C 0 s chlSab2.chr21 120399472 4 + 127223203 g-gTT i chlSab2.chr21 I 123 C 0 s manLeu1.NW_012102765v1 1525788 4 - 2854183 g-gca i manLeu1.NW_012102765v1 I 68 C 0 s colAng1.NW_012115154v1 20232357 4 + 27496150 g-gtT i colAng1.NW_012115154v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e aotNan1.NW_018506100v1 3257541 0 - 4527795 C e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e cerAty1.NW_012008583v1 9547787 122 + 11639508 I e macNem1.NW_012015910v1 7903551 194 + 15219753 I e rheMac8.chr3 178445282 118 + 185818997 I e panPan2.chr7 155954423 1771 + 162613886 M e saiBol1.JH378140 17020409 0 + 19594188 C e calJac3.chr8 33682741 0 - 128169293 C a score=279984.000000 s hg38.chrUn_KI270746v1 44344 48 + 66486 AACTAAATAGAAG-GACTACATCTCGGTATTTTTCAATACAAATACATT s panTro5.chr2A 90603030 48 + 111504155 AACTAAATAGAAGCGACTACAT-TCAGTATTTTTCAATACAAATACATT i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102827489 48 + 110113093 AACTAAATAGAAG-GACTACATCTCAGTATTTTTCAATACAAATACATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178445400 48 + 185818997 AACTAAATAGAAG-GACTACATCTCAGTATTTTTCAAAACAAATACATT i rheMac8.chr3 I 118 C 0 s macFas5.chr3 184935131 48 + 192294377 AACTAAATAGAAG-GACTACATCTCAGTATTTTTCAAAACAAATACATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7903745 48 + 15219753 AACTAAATAGAAG-GACTACATCTCAGTATTTTTCAAAACAAATACATT i macNem1.NW_012015910v1 I 194 C 0 s cerAty1.NW_012008583v1 9547909 48 + 11639508 AACTAAATAGAAG-GACTACATCTCAGTATTTTTCAAAACAAATACATT i cerAty1.NW_012008583v1 I 122 C 0 s chlSab2.chr21 120399476 48 + 127223203 AACTAAATAGAAG-GACTACATCTCAGTATTTTTCAAAACAAATACATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1525792 48 - 2854183 AACTAAATAGAAG-GACTACATCTCAGTATTTTTCAAAACAAATACATT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20232361 48 + 27496150 AACTAAATAGAAG-GACTACATCTCAGTATTTTTCAAAATAAATATATT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33682741 40 - 128169293 AAC----TAGAAC-----ACATCTCAGTATTTTTCAATACAAATACATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17020409 44 + 19594188 aaCTAAATAGAAG-----ACATCTCAGTATTTTTCAATACAAATACACT i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3257541 44 - 4527795 AACTAAATAGAAC-----ACATCTCAGTATTTTTCAATACAAATACATT i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M a score=44912.000000 s hg38.chrUn_KI270746v1 44392 14 + 66486 TAAAAGCAGtttt---t- s panTro5.chr2A 90603078 16 + 111504155 TAAAA-CAGTTTtttgt- i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102827537 17 + 110113093 TAAAAGCAGAtttttgt- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178445448 13 + 185818997 TAAAAGCAGtttt----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184935179 13 + 192294377 TAAAAGCAGtttt----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7903793 13 + 15219753 TAAAAGCAGtttt----- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9547957 13 + 11639508 TAAAAGCAGtttt----- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120399524 13 + 127223203 TAAAAGCAGtttt----- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1525840 13 - 2854183 TAAAAGCAGTAtt----- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20232409 13 + 27496150 TAAAAGCAGTTTT----- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33682781 14 - 128169293 TAAAAGCCGTTTT----C i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17020453 14 + 19594188 TAAAAGCAGTTTT----C i saiBol1.JH378140 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e aotNan1.NW_018506100v1 3257585 0 - 4527795 C e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M a score=255597.000000 s hg38.chrUn_KI270746v1 44406 89 + 66486 ttgtttttt---tttgt--ttgtttttgagacagtctctcgctatgtcacccaggctggagtgcagtggcacaatcttggctcactgcaagctc s panTro5.chr2A 90603094 89 + 111504155 ttgttttttttgtttgt--ttgtttttgagatgg-atcttgctatgtcacccaggctggagtgcagtggcacaatctcagct-actgcaagc-c i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102827554 83 + 110113093 ttg---------tttgt--ttgtttttgagacagagtctcgctatgttgcccaggctggagtgcagtggcacaatctcggctcactgcaagctc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178445461 77 + 185818997 ------------tttgg--tt-tttttgagacag--tctcgctctgtcccccaggctggagtgcagtggcgcgatctccgctcactgcaagctc i rheMac8.chr3 C 0 I 16 s macFas5.chr3 184935192 77 + 192294377 ------------tttgg--tt-tttttgagacag--tctcgctctgtcccccaggctggagtgcagtggcgcgatctcggctcactgcaagctc i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7903806 77 + 15219753 ------------tttgg--tt-tttttgagacag--tctcgctctgtcccccaggctggagtgcagtggcgcgatctcggctcactgcaagctc i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9547970 79 + 11639508 ------------tttggtttt-tttttgagacag--tctcgctctgtcccccaggctggagtgcagtggcgcgatctcggctcactgcaagctc i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120399537 77 + 127223203 ------------tttgt--tt-tttttgagacag--tctcgctctgtcccccaagccggagtgcagtggcccgatctcggctcactgcaagctc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1525853 77 - 2854183 ------------tttgt--tt-tttttgagacag--tctcgctctgtcccccaggctggagtgcagtggcgcgatctcggctcactgcaagctc i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20232422 77 + 27496150 ------------TTGGG--tt-tttttgagacag--tctcgttctgtcccccatgctggagtgcagtggtgcgatctcggctcactgcaagctc i colAng1.NW_012115154v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e aotNan1.NW_018506100v1 3257585 0 - 4527795 C e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M e saiBol1.JH378140 17020467 0 + 19594188 C e calJac3.chr8 33682795 0 - 128169293 C a score=1895.000000 s hg38.chrUn_KI270746v1 44495 58 + 66486 tgtctcccaggttcac-ggcattctcctgcctcagcctcccgagtagctggga-ctacag s panTro5.chr2A 90603183 56 + 111504155 tgtctcccagg-tcac-ggca-tctcctgcctcag-ctcccgagtagctgggctctacaa i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102827637 58 + 110113093 tgtctcccgggttcac-gccattctcctgcctcagcctcccgagtagctggga-ctacag i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184935269 16 + 192294377 cgcctcctgggttcac-------------------------------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7903883 16 + 15219753 cgcctcctgggttcac-------------------------------------------- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9548049 17 + 11639508 cgcctcctgggttcaca------------------------------------------- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120399614 15 + 127223203 cgcctcc-cggttcac-------------------------------------------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1525930 16 - 2854183 cgcctcctcggttcac-------------------------------------------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20232499 16 + 27496150 cgcctcccgggttcac-------------------------------------------- i colAng1.NW_012115154v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e aotNan1.NW_018506100v1 3257585 0 - 4527795 C e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e rheMac8.chr3 178445538 16 + 185818997 I e panPan2.chr7 155954423 1771 + 162613886 M e saiBol1.JH378140 17020467 0 + 19594188 C e calJac3.chr8 33682795 0 - 128169293 C a score=514616.000000 s hg38.chrUn_KI270746v1 44553 146 + 66486 gcgcctgccaccatgcccggctaatttttt-gtatttttagtagagatggggtttcaccatgttagccaggatgccaggatggtctcgatctcctgacctcatgatccgcccacctcggcctcccaaagtgctgggattacaggcat s panTro5.chr2A 90603239 137 + 111504155 gcgcctgccactcagcccagctaatttttt--tatttttagtagagatggggtttcaccatgtta--------gccaggatggtctcgatctccagacctcatgatccacccacctcggcctcctgtagtgctgggattacaggcat i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102827695 138 + 110113093 gcacctgccctcacgcccagctaatttttt-gtatttttagtagagacggggtttcaccgtgtta--------gccaggatggtctcgatctcctgacctcatgatccgcccacctcggcctcccaaagtgctgggattacaggcat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178445554 139 + 185818997 gcgcctgccaccacgcccggctaatttttttgtatttttagtagaaatggggttttaccatgcta--------gccaggatggtttcgatctcctgacacggtgatccgcccgccttggcctgccaaagtgctgggattacaggcat i rheMac8.chr3 I 16 C 0 s macFas5.chr3 184935285 139 + 192294377 gcgcctgccaccacgcccggctaatttttttgtatttttagtagaaatggggttttaccatgtta--------gccaggatggtttcgatctcctgacacggtgatccgcccgccttggcctgccaaagtgctgggattacaggcat i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7903899 139 + 15219753 gcgcctgccaccacgcccggctaatttttttgtatttttagtagaaatggggttttaccatgtta--------gccaggatggtttcgatctcctgacacggtgatccgcccgccttggcctgccaaagtgctgggattacaggcat i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9548066 138 + 11639508 -cgcctgccaccacgtccggctaatttttttgtatttttagtagaaatggggtttcaccatgtta--------gccaggatggtttcgatctcctgacacggtgatccgcccgccttggcctgccaaagtgctgggattacaggtat i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120399629 139 + 127223203 gcgcctgccaccacgcccggctaatttttttgtatttttagtagaaatggggtttcaccatgtta--------gccaggatggtttcgatctcctgacacggtgatccgcccgccttggcctgccaaagtgctgggattacaggcat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1525946 139 - 2854183 gcgcctgccaccacgcccggctaatttttttgtatttttagtagaaatggggtttcaccatgtta--------gccaggatggtttcgatctcctgacacggtgatccgcccgccttggcctgccaaagtgctgggattacaggcat i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20232515 139 + 27496150 gcgcctgccaccacgcccggctaatttttttgtatttttagtagaaatggggcttcaccatgtta--------accacgatggtttcgatctcctgacacagtgatccacccgcctcggcctgccaaagtgctgggattacaggcat i colAng1.NW_012115154v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e aotNan1.NW_018506100v1 3257585 0 - 4527795 C e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e panPan2.chr7 155954423 1771 + 162613886 M e saiBol1.JH378140 17020467 0 + 19594188 C e calJac3.chr8 33682795 0 - 128169293 C a score=63444.000000 s hg38.chrUn_KI270746v1 44699 14 + 66486 gagccaccgtgccc s panTro5.chr2A 90603376 14 + 111504155 gagccaccgtgccc i panTro5.chr2A C 0 C 0 s panPan2.chr7 155956194 14 + 162613886 GAGCCACCGCACCC i panPan2.chr7 M 1771 C 0 s nomLeu3.chr13 102827833 14 + 110113093 gagccactgcgccc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178445693 14 + 185818997 gagccaccgcgctc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184935424 14 + 192294377 gagccaccgtgctc i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7904038 14 + 15219753 gagccaccgcgctc i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9548204 14 + 11639508 gagccaccgcgctc i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120399768 14 + 127223203 gagccaccgcgctc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1526085 14 - 2854183 gagccaccgtgctc i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20232654 14 + 27496150 gagccaccgcactt i colAng1.NW_012115154v1 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e canFam3.chr16 16044278 49 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e aotNan1.NW_018506100v1 3257585 0 - 4527795 C e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e saiBol1.JH378140 17020467 0 + 19594188 C e calJac3.chr8 33682795 0 - 128169293 C a score=3359.000000 s hg38.chrUn_KI270746v1 44713 4 + 66486 -agcc s panTro5.chr2A 90603390 4 + 111504155 -agcc i panTro5.chr2A C 0 C 0 s panPan2.chr7 155956208 4 + 162613886 -AGCC i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102827847 4 + 110113093 -ggcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178445707 4 + 185818997 -ggTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184935438 4 + 192294377 -ggTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7904052 4 + 15219753 -ggTG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9548218 4 + 11639508 -ggTG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120399782 4 + 127223203 -agtc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1526099 4 - 2854183 -ggTG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20232668 4 + 27496150 -ggtc i colAng1.NW_012115154v1 C 0 C 0 s canFam3.chr16 16044327 4 + 59632846 AGAT- i canFam3.chr16 I 49 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e aotNan1.NW_018506100v1 3257585 0 - 4527795 C e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e saiBol1.JH378140 17020467 0 + 19594188 C e calJac3.chr8 33682795 0 - 128169293 C a score=94626.000000 s hg38.chrUn_KI270746v1 44717 14 + 66486 TAAAAGCAGTTTTA s panTro5.chr2A 90603394 14 + 111504155 TAAAAGCAGTTTTA i panTro5.chr2A C 0 C 0 s panPan2.chr7 155956212 14 + 162613886 TAAAGGCAGTTTTA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102827851 14 + 110113093 TAAAAGCAGTTTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178445711 14 + 185818997 TAAAAGCAGTTTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184935442 14 + 192294377 TAAAAGCAGTTTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7904056 14 + 15219753 TAAAAGCAGTTTTA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9548222 14 + 11639508 TAAAAGCAGTTTTA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120399786 14 + 127223203 TAAAAGCAGTTTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1526103 14 - 2854183 TAAAAGCAGTTTTA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20232672 14 + 27496150 TAAAAGCAGTTTCA i colAng1.NW_012115154v1 C 0 C 0 s aotNan1.NW_018506100v1 3257585 14 - 4527795 TAAAAGCAGTTTTC i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16044331 14 + 59632846 TAAAAGCAGTTCTA i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I e saiBol1.JH378140 17020467 0 + 19594188 C e calJac3.chr8 33682795 0 - 128169293 C a score=3079199.000000 s hg38.chrUn_KI270746v1 44731 413 + 66486 ATGGATAGTACTAATGCTTT---------------ATAAGAGCAATTTATAGTCATATGAACCCTAATGACTACAAG-------TGTTAATAATGCCaatattaatcattagggagtaagtaaagcaatgacaaatccaaacattaggaaagtacgaaacattttaaaagtagggaggtagaaacttgtatagactgccatgaaagaaa--------ttatcaaaagacactgttgagtgaaaaaataaattgcagaacagtatttgaggtatagcact-ataatataaaaacatgcaaattcattatatgtagtctatgggcacatataataggttgactcataagaaattgctgcttttcatcagttcagaaat-----aatattggcaatttcatatggatcaacctaata-tataaatataccaaactggtaac----agggaaataagg s panTro5.chr2A 90603408 413 + 111504155 ATGGATAGTACTAATGCTTT---------------ATAAGAGCAATTTATAGTCTTATGAACCCTAATGACTACAAG-------TGTTAATAATGCCaatattcatcattagggagtaagtaaagccatgacaaatccaaacattagaaaattacgcaacattttaaaagtagggaggtagaaacttgtatagactgccatgaaagaaa--------ttatcaaaagacgttgttgagtgaaaaaataaattgcagaacagtatttgaggtatagcact-ataatataaaaacatgcaaagtcattatatgtagtctatgggcacatatAAtaggttgaatcataagaaattgctgcttttcatcagttcagaaat-----aatattggcaatttcatatggatcaacctaaTA-TATAAatataccaaactggtaac----agggaaataagg i panTro5.chr2A C 0 C 0 s panPan2.chr7 155956226 413 + 162613886 ATGGATAGTACTAATGCTTT---------------ATAAGAGCAATTTATAGTCATATGAACCCTAATGACTACAAG-------TGTTAATAATGCCaatattcatcattagggagtaagtaaagcaatgacaaatccaaacattagaaaattacgcaacattttaaaagtagggaggtagaaacttgtatagactgccatgaaagaaa--------ttatcaaaagacattgttgagtgaaaaaataaattgcagaacagtatttgaggtatagcact-ataatataaaaacatgcaaagtcattatatgtagtctatgggcatatataAtaggttgagtcataagaaattgctgcttttcatcagttcagaaat-----aatattggcaatttcatatggatcaacctaaTA-TATAAatataccaaactgataac----aaggaaataaga i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102827865 413 + 110113093 ATGGTTAGTACTAATGCTTT---------------ATAAGAGCAATTTACAGTCATATGAACCCTAATGACTACAAG-------TGTTAATAATGCCaatattcatcattagggagtaagtaaagcaatgacaaatccaaacattagaaaattacgcaacattttaaaagtagggaggtagaaacttgtatagactcccatgagagaaa--------ttaccaaaagacattgttgagtgaaaaaataaattgcagaacagtatgtgaggtatagcact-ataatataaaaacatgcaaagtcattgtatgtagtctatgggcacatataAtaggttgaatcataagaaattgctgcttttcatcagttcagaaat-----aatattggcaatttcatatggatcaacctaaTA-TATAAatataccaaactggtaac----agggaaataaga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178445725 393 + 185818997 ATGGACAGTACTAATGCTTT---------------ATAAGAGCAATTTACAGTCATATGAACCC-----------------------TAATAATGCCGatattcatcactacggaataagtaaaacaatggcaaatccaaacattagaaaattatgcaacattttaaaagcaaggaggcagaaatttatatggactctcatgaaagaaa--------ttatcaaaagacattgttgagtgaaaaaataaattgcagaacagtatgtgaggtgtagcact-----tataaaaacatgcaaagtcattatatgtagtctatgggcacatgtAAAACgttgaatcataagaaactgctgcttttcatcagttcagaaat-----aatattggcaatttcatacagatcaacctaaTA-TATAAatataccaaactggtaac----agggaaataaga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184935456 393 + 192294377 ATGGACAGTACTAATGCTTT---------------ATAAGAGCAATTTACAGTCATATGAACCC-----------------------TAATAATGCCGatattcatcactacggaataagtaaaacaatggcaaatccaaacattagaaaattatgcaacattttaaaagcaaggaggcagaaatttatatggactctcatgaaagaaa--------ttatcaaaagacattgttgagtgaaaaaataaattgcagaacagtatgtgaggtgtagcact-----tataaaaacatgcaaagtcattatatgtagtctatgggcacatgtAAAACgttgaatcataagaaactgctgcttttcatcagttcagaaat-----aatattggcaatttcatacagatcaacctaaTA-TATAAatataccaaactggtaac----agggaaataaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7904070 393 + 15219753 ATGGACAGTACTAATGCTTT---------------ATAAGAGCAATTTACAGTCATATGAACCC-----------------------TAATAATGCCGatattcatcactacggaataagtaaaacaatggcaaatccaaacattagaaaattatgcaacattttaaaagcaaggaggcagaaatttatatggactctcatgaaagaaa--------ttatcaaaagacattgttgagtgaaaaaataaattgcagaacagtatgtgaggtgtagcact-----tataaaaacatgcaaagtcattatatgtagtctatgggcacatgtAAAACgttgaatcataagaaactgctgcttttcatcagttcagaaat-----aatattggcaatttcatacagatcaacctaaTA-TATAAatataccaaactggtaac----agggaaataaga i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9548236 393 + 11639508 ATGGACAGTACTAATGCTTT---------------ATAAGAGCAATTTACAGTCATATGAACCC-----------------------TAATAATGCCGatattcatcactacggaataagtaaaacaatggcaaatccaaacattagaaaattatgcaacattttaaaagcaaggaggcagaaatttatatggactttcatgaaagaaa--------ttatcaaaagacattgttgagtgaaaaaataaattgcagaacagtatgtgaggtgtagcact-----tataaaaacatgcaaagtcattatatgtagtctatgggcacatgtAAAATgttgaatcataagaaactgctgcttttcatcagttcagaaat-----aatattggcaatttcatacagatcaacctaaTA-TATAAATATACCAAACTGGCAAC----agggaaataaga i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120399800 398 + 127223203 ATGGACAGTACTAATGCTTT---------------GTAAGTCCAATTTACAGTCATATGAACCC-----------------------TCATAATGCTGatattcatcattacagaataagtaaaacaatggcaaatccaaacattagaaaattacgcaacattttaaaagcaaggaggcagaaatttatatgaactctcatgaaagaaa--------ttatcaaaagacattgttgagtgaaaaaataaattgcagaacagtatgtgaggtgtagcacttataatataaaaacatgcaaagtcattatatgtagtctatgggcacatgtAAtaggttgaatcataagaaactgctgcttttcatcagttcagaaaa-----aatattggcaatttcattcggatcaacctaaTA-TATAAatataccaaactggtaac----agggaaataaga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1526117 390 - 2854183 ATGGACAGTACTAATGCTTT---------------ATAAGAGCAATTTACAGTCATATGAACCC-----------------------TAATAATGCCGatattcatcactacggaataagtaaaacaatggcaaatccaaacattagaaaattatgcaacattttaaaaccaaggaggcagaaatttatatggactctcatgaaaaaaa--------ttatcaaaagacattgttgagtgaaaaaataaattgcagaacagtatgtgaggtgtagcact-----tataaaaacatgcaaagtcattatatgtagtctatgggcacatgtAAAACgttgaatcataagaaactgctgcttttcatcagttcagaaat-----aatattggcaatttcatacagatcaacctaaTA-TATAAATATACCAAACTGGTAAC----agggaaat---a i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20232686 393 + 27496150 ATGGACAGTACTAATGCTTT---------------ATAAGAGCAATTTACAGTCATATGAACCC-----------------------TAATAATGCTGatattcatcattacagaataagtaaaacaatggcaaatccaaacattagaaaattatgcaacattttaaaagcaaggaggcagaaatttatatggactctcatgaaagaaa--------ttatcaaaagacactgttgagtaaaaaaataaattgcagaacagtatgtgaggtgtagcact-----tataaaaacatgcaaagtcattatatgtagtctacgggcacatatCAtaggttgaatcataagaaactgctgcttttcatcagttcagaaat-----aatattggcaatttcatacggatcaacctaaTA-TATAAAGATACCAAACTAGTAAC----agggaaataaga i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33682795 407 - 128169293 ATGGATAGTACTAATGCTTT---------------ATAAGAGCAATTTACAGTCATATGAACCCTAATGACTATAAG-------TGTTAGTAACGCCaatattcttcattagggaataagtaaaacaatggcaaatacaaacattaggaagttatgcaacattttaaaagtaggaaggtagaaatttgtatggactcccatgaaagaaa--------ttatcaaaagacactgttgagtg-aaaaataaactgcagaatagtatgtgaggtatagcact-atgatataaaaaaatgcaaagtcatta----tagtctacgggcacatataAtaggttgaatcataagaaattgctgc-tttcatcaggtcagaaat-----aatattggcagtttcatacagatcaacctaaTA-TATAAATATACCAAACTGGTAAC----AGGGGGAAAAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17020467 412 + 19594188 ATGGACAGTACTAATGCTTT---------------GTAAGAGCAATTTACAGTCATATGAACCCTAATGATTACAAG-------TGTTAGTAACGCCaatattcatcattagggaataagtaaaacaatggcagatacaaacattagaaaattatgcaacattttaaaagtaggaaggtagaaatttgtagggacttccatggaagaaa--------ttatcaaaagacactgttgagtgaaaaaataaactgcagactagtatgtgaggtatagcagt-atggtacaaaaacatgcgAAGTCATTA----TAGTCTACGGGCACTTATAAtaggctgaatcataagaaactgctgc-tttcatcaggtcagaaat-----aatactggcaatttcataaagatcaacctaaTA-TATAAatataccaaactggtaacgggggggggggggggg i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3257599 408 - 4527795 ATGGACAGTAGTAATGCTTT---------------ATAAGAGCAATTTACAGTCATATGAACCCTAATGACTACAAG-------TGTTAGTAATGCCaatattgatcattagggaataaataaaacaatggcaaatacaaacattagaaaattatgcaacattttaaaagtaggtaggtagaaatctgtatggactcccatgaaagaaa--------ttatcaaaagacattgttgagtgaaaaaataaactgcagaacagtatgtgaggtatagcact-atggtataaaaacatgcaaagtcatta----tagtctacgggcacttataAtaggttgaatcataagaaagtgctgc-tttcatcaggtcagaaat-----aatactggcaatttcatacagatcaacctaaTA-TATAAATATACCAAACTGGTAAA----GGGGGAAAAAAA i aotNan1.NW_018506100v1 C 0 I 2 s canFam3.chr16 16044345 438 + 59632846 ATGGACTGCACTACTGTTTTATTATAGAACCAACCATAAAAGCAATTGACAGTCATAATAAGTCTAAAGACtgtaagagaaaactgtaagcaacctaaatagtcatcactagggaattactaaaaccatggcaaatccaaac--tggaaag--atgcagcatttaaaaaaca--gtggtagaAATTTGTTTTGATTTCCATCAAAAAAAAAAAAATTTCACCACGCCACAGAGCTGGGTAGAAAAATAAGACACAGAAGCATATGTGAGGTAGAGCACT-ATCGTACAAAAATATGCAAAGCAATTATGTGCAGTCTACAAGCACATAAAAtaggttcaatcataag---ttgctgtttttc--caggtcaaaaatggttgaaagttggcaacttcatatggatcaacctaaTATTGTAAATGCACCAAACAGGTAAA----AGGAAAAAATGT i canFam3.chr16 C 0 I 1 e dasNov3.JH575209 1219969 27 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e cebCap1.NW_016107335v1 4904811 4503 - 11686629 I a score=445364.000000 s hg38.chrUn_KI270746v1 45144 54 + 66486 aggactgaggagt----tagtaatggtaaattctgatctacctat---aacactttaa--ttc s panTro5.chr2A 90603821 54 + 111504155 aggactgaggagt----tagtaatggtaaattctgatctacctat---aatgctttaa--ttt i panTro5.chr2A C 0 C 0 s panPan2.chr7 155956639 54 + 162613886 aggactgaggagt----tagtaatggtaaattctgatctacctat---aatgctttaa--ttt i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102828278 54 + 110113093 aggactgaggagt----tagtaatggtaaatcctgatctacctat---aatgctttaa--ttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178446118 54 + 185818997 aggactgaggagt----tagtaatggtaaattctgatctacctat---aatgctttaa--ttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184935849 54 + 192294377 aggactgaggagt----tagtaatggtaaattctgatctacctat---aatgctttca--ttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7904463 51 + 15219753 aggactgaggagt----tagtaatggtaaattctgatctacct------atgctttaa--ttt i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9548629 54 + 11639508 aggactgaggagt----tagtaacggtaaattctgatctacctat---aatgctttaa--ttt i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120400198 54 + 127223203 aggactgaggagt----tagtaatggtaaattctgatctacctat---aatgctttaa--ttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1526507 54 - 2854183 aggactgaggagt----tagtaatggtaaattctgatctacctat---aatgctttaa--ttt i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20233079 54 + 27496150 aggactgaggagt----tagcaatggtaaattctgatctacctat---aatgctttaa--ttt i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33683202 54 - 128169293 AAAACTAAGGAGG----TAGTAATGGTAATCTCTGATCTACCTAT---AATGCTTCAA--TTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17020879 60 + 19594188 aagaccaaggaggtagttagtaatggtaatctctgatctacctat---aacgctccaattttt i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4909314 55 - 11686629 aggactgaggagg----tagtaatggtaatctcttatctacctac---aatgcttcaa-tttt i cebCap1.NW_016107335v1 I 4503 C 0 s aotNan1.NW_018506100v1 3258009 54 - 4527795 AGGACTGAGAAGG----TAGTAATGGTAACCTCTGATCTACCTAT---AATGCTTCAA--ttt i aotNan1.NW_018506100v1 I 2 I 305 s canFam3.chr16 16044784 57 + 59632846 AAGACTCAAGAGG----CAGCAGAAGTATAGACAGCTTTGATTATCAGGATGTTTTTA--TTC i canFam3.chr16 I 1 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I a score=1288705.000000 s hg38.chrUn_KI270746v1 45198 180 + 66486 ttttaatagagaaaatgcatt----gatgtg----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcatagcattaacaaaatcagctttCTAAGATTTTAGAGAATCATCCAAGATGATTCACAGAAGTAGAATCATCAT--CATCAGTAAGAAATTAAGTGACTACTAAAAGTAA-----TCATTAATTCAGTCATAGGACTAATGATGCATTGACA s panTro5.chr2A 90603875 180 + 111504155 ttttaatagagaaaatgtatt----gatgtg----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcatagcattaacaaaattagctttCTAAGATTTTAGAGAATCATCCAAGATGATTCACAAAAGTAGAATCATCAT--CACTAGTAAGAAATTAAGTGACTACTAAAAGTAA-----TCATTAATTCAGTCATAGGACTAATGATGCATTGACA i panTro5.chr2A C 0 C 0 s panPan2.chr7 155956693 177 + 162613886 ttttaatagagaaaatgtatt----gatgtg----------------------------------------------------------------------------------------------------------------------------ttacat-------------------------------------------gcatagtattaacaaaatcagctttCTAAGATTTTAGAGAATCATCCAAGATGATTCACAAAAGTAGAATCATCAT--C---AGTAAGAAATTAAGTGACTACTAAAAGTAA-----TCATTAATTCAGTCATAGAACTAATGATGCATTGACA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102828332 172 + 110113093 ttttaatagagaaaatgtatt----gatgtg----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcatacc----tcaaaattagctttCTAAGATTTTAGAGAATCATCCAAGATGATTCACAAAAGTAGAATCATCAT--CATCAGTAAGAAAT----TGACTACTAAAAGTAA-----TCATTAATTCAGTCACAGGACTAATGATGCATTGACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178446172 176 + 185818997 tgtaaatagaaaaaatgcatt----gatgtg----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcatacc----tcaaaattagttttCTAAGATTTTAGAGAATCATCCAAGATGATTCACAAAAGTAGAATCATCAT--GATCAGTAAGAAATTAAGTGACCACTAAAAGTAA-----TCATTAATTCAGCCATAGGACTAATGATGCATTGAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184935903 176 + 192294377 tgtaaatagaaaaaatgtatt----gatgtg----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcatacc----tcaaaattagttttCTAAGATTTTAGAGAATCATCCAAGATGATTCACAAAAGTAGAATCATCAT--GATCAGTAAGAAATTAAGTGACCACTAAAAGTAA-----TCATTAATTCAGCCATAGGACTAATGATGCATTGAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7904514 176 + 15219753 tgtaaatagaaaaaatgtatt----gatgtg----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcatacc----tcaaaattagttttCTAAGATTTTAGAGAATCATCCAAGATGATTCACAAAAGTAGAATCATCAT--GATCAGTAAGAAATTAAGTGACCACTAAAAGTAA-----TCATTAATTCAGCCATAGGACTAATGATGCATTGAGA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9548683 176 + 11639508 tgtaaacagaaaaaatgtatt----gatgtg----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcatacc----tcaaaattagttttCTAAGATTTTAGAGAATCATCCAAGATGATTCACAAAAGTAGAATCATCAT--GATCAGTAAGAAATTAAGTGACCACTAAAAGTAA-----TCATTAATTCAGCCATAGGACTAATGATGCATTGAGA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120400252 176 + 127223203 tgtaaattaaaaaaatgtatt----gatgtg----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcatacc----tcaaaattagttttCTAAGATTTTAGAGAATCATCCAAGATGATTCACAAAAGTAGAATCATCAT--GATCAGTAAGAAATTAAGTGACCACTAAAAGTAA-----TCATTAATTCAGCCATAGGACTAATGATGCATTGAGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1526561 176 - 2854183 tgtaaatagaaaaaatgtatt----gatgtg----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcatacc----tcaaaattagttttCTAAGATTTTAGAGAATCATCCAAGATGATTCACAAAAGTAGAATCATCAT--GATCAGTAAGAAATTAAGTGACCACTAAAAGTAA-----TCATTAATTCAGCCATAGGACTAATGATGCATTGAGA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20233133 176 + 27496150 tgtacacagaaaaaatgtatt----gatgtg----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcatact----tcaaaattagttttCTAAGATTTTAGAGAATCATCCAAGATGATTCACAAAAGCAGAATCATCAT--GATCAGTAAGAAATTAAGTGACCACTAAAAGTAA-----TCATTAATTCAGCCATAGGACTAATGATGCATTGAGA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33683256 153 - 128169293 TTTTAATAGAAAAAATGTATT----CATGTA----------------------------------------------------------------------------------------------------------------------------TTATAT-------------------------------------------GCATACC----TCAAAAT-AGCTTTCTAAGATTTTAGAGAATCATCCAAGATGATTCACAAAAGCAGAATAATTAT--CATTAGTAAGAAATTAAGTGGCTACTAAAAGTAA---------------------------AGTAATGCAGTGAGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17020939 153 + 19594188 ttttaatagagaaaatgtatt----catgta----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcctatc----tcaaaat-agctttctaaaaTTTCAGAGAATCATCCAAGATGATTCGCAAAAGCAGAATAATCAT--CATTAGTAAGAAATTAAGTGATTACTAAAAGTAA---------------------------AGTAACGCAGTGAGA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4909369 149 - 11686629 ttttaatagagaaaatgtatt----catgta----------------------------------------------------------------------------------------------------------------------------ttatat-------------------------------------------gcatacc----tcaaaat-AG----CTAAGATTTTAGAGAATCATCCAAGATAACTCGCAGAAGCAGAATAATCTT--CATTAGTAAGAAATTAAGTGACTACTAAAAGTAA---------------------------AGTAATGCAGTCAGA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3258368 153 - 4527795 TTTTAATAGAGAAAATGTATT----CGTGTA----------------------------------------------------------------------------------------------------------------------------TTATAT-------------------------------------------GCATACC----TCAAAAC-AGCTTTCTAAGATTTCAGAGAATCATCCAAGATGATTCGCAAAAGCAGAATAATCAT--CATTAGTTAGAAATTAAGTGACTACTAAAAGTAA---------------------------AGTAATGCAGTGAGA i aotNan1.NW_018506100v1 I 305 C 0 s canFam3.chr16 16044841 345 + 59632846 --TTTTTTGAGGAAATATATTTTAAAATGTGCATCTCAAGTTgcatgggtggctcagttggttaagtatctaactcttgatttcagctcagatcaagatctcagggttgtgaaatcaagccccacattgggctctgcactgggcatggagccagcttatagttctttctccctctcccccaccctctcTTAAAAAAAAAAAAAAGTATATC----TCAAAATTAGCATTTTAAGACTTTAGCAAGTCAAACAAGATGATTCATA-AAGTAAAAT-ATCATTCCATTAGTAA-----TAATTGTCTACTAAAAGTGAAGTTACCAGTAATTCGCCCACAGGACTAAAGATATACTGAAA i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1219969 27 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I a score=1302881.000000 s hg38.chrUn_KI270746v1 45378 143 + 66486 AGACTATTGAGATATATAATTTTGGAAATGGCTAAAATAGAGAT---------------------AA------------------AGTATCTATTTCTACCTCCCAAC-CACT-------TACAGAAAATTCAACAC---------------ATTATACACACTGAGCA-GCTCAAAGAAATTGTAAAGATCCATTATTATTTTTA s panTro5.chr2A 90604055 143 + 111504155 AGGCTATTGAGATATATAATTATGGAAATGGCTAAAATAGAGAT---------------------AA------------------AGTATCTATTTCTACCTCCCAAC-CACT-------AACAGAAAATTCAACAC---------------ATTATACACACTGAGCA-GCTCAAAGAAATTGTAAAGATCCATTATTATTTTTA i panTro5.chr2A C 0 C 0 s panPan2.chr7 155956870 143 + 162613886 AGACTATTGAGATATATAATTATGGAAATGGCTAAAATAGAGAT---------------------AA------------------AGTATCTATTTCTACCTCCCAAC-CACT-------AACAGAAAATTCAACAC---------------ATTATACACACTGAGCA-GCTCAAAGAAATTGTAAAGATCCATTATTATTTTTA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102828504 143 + 110113093 AGACTATTGAGATATATAATTATGGAAATGGCTAAAATAGAGAT---------------------AA------------------AGTATCTATTTCTACCTCCCTAC-CACT-------AACAGAAAATTCAACAC---------------ATTATACACACTGAGCA-GCTCAAAGAAATTGTAAACATCCATTATTATTTTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178446348 143 + 185818997 AGACTATTAAGATATATAATTGTGGAAATGGCTAAAATAGAGAT---------------------AA------------------AGTATCTATTTCTACCTCCCAAC-CACT-------AACAGAAATTTCGACAC---------------TTTATACACACTGAGTA-GCTCAAAGAAATTGTAAAGATCCATTATTATTTTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184936079 143 + 192294377 AGACTATTAAGATATATAATTGTGGAAATGGCTAAAATAGAGAT---------------------AA------------------AGTATCTATTTCTACCTCCCAAC-CACT-------AACAGAAATTTCGACAC---------------TTTATACACACTGAGTA-GCTCAAAGAAATTGTAAAGATCCATTATTATTTTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7904690 143 + 15219753 AGACTATTAAGATATATAATCGTGGAAATGGCTAAAATAGAGAT---------------------AA------------------AGTATCTATTTCTACCTCCCAAC-CACT-------AACAGAAATTTCGACAC---------------TTTATACACACTGAGTA-GCTCAAAGAAATTGTAAAGATCCATTATTATTTTTA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9548859 143 + 11639508 AGACTATTAAGATATATAATTGTGGAAATGGCTAAAATAGAGAT---------------------AA------------------AGTATCTATTTCTACCTCCCAAC-CACT-------AACAGAAATTTCAACAC---------------TTTATACACACTGAGCA-GCTCAAAGAAATTGTAAAGATCCATTATTATTTTTA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120400428 142 + 127223203 AGACTATTAAGATATATAATTGTGGAAATGGCTAAAATAGAGAT----------------------A------------------AGTATCTATTTCTACCTCCCAAC-CACT-------AACAGAAATTTCAACAC---------------TTTATACACACTGAGCA-GCTAAAAGAAATTGTAAAGATCCATTATTATTTTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1526737 143 - 2854183 AGACTATTAAGATATATAATTGTGGAAATGGCTAAAATAGAGAT---------------------AA------------------AGTATCTATTTCTACCTCCCAAC-CACT-------AACAGAAATTTCAACAC---------------TTTATACACACTGAGCA-GCTCAAAGAAATTGTAAAGATCCATTATTATTTTTA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20233309 144 + 27496150 AGACTATTAAGATATGTAATTGTGGAAATGGCTAAAATAGAGAT--------------------AAA------------------AGTATCTATTTCTACCTCCCAAC-CACT-------AACAGAAATTTCAACAC---------------TTTATACACACTGCGCA-GCTCAAAGAAATTGTAAAGATCCATTATTATTTTTA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33683409 143 - 128169293 AGACTATTGAGATATATAATTATGGAAATGGCTAAAATACAGAT---------------------AA------------------AGCATCGATTTTTACCTCCCAAT-CACT-------AACAGAAAATTCAATAC---------------ATTTTACACACCGAGCA-GCTCAAAGAAATTGTAAAGATCCATTATTATTTTTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17021092 144 + 19594188 AGACTATTGAGATATATAATTACGGAAATGGCTGAAACACAGAT---------------------AA------------------AGTATCCATTTCTACCTCCCAATCCACT-------AACAGAAAATTCAATAC---------------ATTTTACACACCAAGCA-GCTCAAAGAAATTGTAAAGATCCattattattatta i saiBol1.JH378140 C 0 I 606 s cebCap1.NW_016107335v1 4909518 144 - 11686629 GGACTGTTGAGATGTATAATTATGGAAATGACTAAAATACAGAT---------------------AA------------------AGCATCCATTTCTACCTCCCGATCCACT-------AACAGAAAATTCAATAC---------------ATTTTACACACCGAGCA-GCTCAAAGAAATTGTAAAGATCCATTATTATTTTTG i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3258521 143 - 4527795 AGACTATTGAGACATGTAATTATGGAAATG-CTAAAATACAGAT---------------------AA------------------AACATCCATTTCTACCTCCCGATTCACT-------AACAGAAAATTCAATAC---------------ATTTTACACACCGAGCA-GCTCAAAGAGATTGTAAAGATCCATTATTATTTTTG i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16045186 174 + 59632846 ATATTATTACAATATGAAACTGTGGCAGTAGCTAAAATACAGCTAACAAAAGTAAACTGAAATAAAA------------------AGTATCCATTTCTACATCCCCAT-CTTC-------AACACAGAAAACAAAACAGGTTCTATAATTAGATGATACTTAGAGAATAGGCTCaaataaatgataaaa------tattattttca i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1219996 180 + 1922530 AGATAATTGAAATAAATAACTGTGAAAAGAGCTAAAATATAGAT---------------------AATTGACTGTGTTTTTAATTAATATTCATTTCTGTCTTTCTAC-CTCTCTACCCCAACAGAGAAAACAAAACAAGGTCTACAATTGGGTGATGCCTACCAAGTA-GTTCAAAAAGAT--TAAATGTTATACATATTTTCT- i dasNov3.JH575209 I 27 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I a score=221230.000000 s hg38.chrUn_KI270746v1 45521 24 + 66486 AAAGGAAGTTTAACCAGTGAATGC s panTro5.chr2A 90604198 24 + 111504155 AAAGTAAATTTAACCAGTGGATGC i panTro5.chr2A C 0 C 0 s panPan2.chr7 155957013 24 + 162613886 AAAGGAAATTTAACCAGTGAATGC i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102828647 24 + 110113093 AAAGGAAATCTAACCAGTGAATGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178446491 24 + 185818997 AAAGGAAATTTAACCAGTGAATGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184936222 24 + 192294377 AAAGGAAATTTAACCAGTGAATGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7904833 24 + 15219753 AAAGGAAATTTAACCAGTGAATGC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9549002 24 + 11639508 AAAGGAAATTTAACCAGTGAATGC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120400570 24 + 127223203 AAAGGAAATTTAACCAGTGAATGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1526880 24 - 2854183 AAAGGAAATTTAACCAGTGAATGC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20233453 24 + 27496150 AAAGGAAATTTAACCAGTGAATGC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33683552 24 - 128169293 AAAGGAAATTTAACCAGTGAATGC i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107335v1 4909662 24 - 11686629 AAAGGAAATTTAACCAGTGAATGC i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3258664 24 - 4527795 AAAGGAAATTTAACCAGTGAATGC i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16045360 20 + 59632846 aaataaaatt----CAGAGAACAG i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1220176 24 + 1922530 AAGGAAAATTTAACTGAAGAATGC i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e saiBol1.JH378140 17021236 606 + 19594188 I a score=200972.000000 s hg38.chrUn_KI270746v1 45545 28 + 66486 TTTCATTGAAAATGATA------AACAAT-----------ATATT s panTro5.chr2A 90604222 28 + 111504155 TTTCACTGAAAATGACA------AACAAT-----------ATATT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155957037 28 + 162613886 TTTCACTGAAAATGATA------AACAAT-----------ACATT i panPan2.chr7 C 0 M 1158 s nomLeu3.chr13 102828671 28 + 110113093 TTTCACTGAATATGATA------AACAAT-----------ATATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178446515 27 + 185818997 TTTCACTGAAAATGAT-------AACAAT-----------ATATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184936246 27 + 192294377 TTTCACTGAAAATGAT-------AACAAT-----------ATATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7904857 27 + 15219753 TTTCACTGAAAATGAT-------AACAAT-----------ATATT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9549026 27 + 11639508 TTTCACTGAAAATGAT-------AACAAT-----------ATATT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120400594 28 + 127223203 TTTCACTGAAAATTATA------AACAAT-----------ATATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1526904 27 - 2854183 TTTCACTGAAAATGAT-------AACAAT-----------ATATT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20233477 28 + 27496150 TTTCAGTGAAAATGATA------AACAAT-----------ATATT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33683576 28 - 128169293 TTTCACTAAAAGTGATA------AACAAT-----------ATATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17021842 24 + 19594188 tctcaaaaaaaGTGAT----------AAC-----------ATATT i saiBol1.JH378140 I 606 C 0 s cebCap1.NW_016107335v1 4909686 28 - 11686629 TTTCACTAAAAGTGATA------AACAAT-----------ATATT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3258688 28 - 4527795 TTTCACTAAAAGTGATA------AACAAT-----------ATATT i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16045380 39 + 59632846 TTTTATTCAAAATAAGA------AACAAGAATGGACTACAATATT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1220200 33 + 1922530 CTTCCTTGAAAACAGTAGGATGGAATATG-----------GTAT- i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I a score=710071.000000 s hg38.chrUn_KI270746v1 45573 90 + 66486 CCCAGTA-TAAACCAGAAATAAAGTCTGCAGTAGAAAACTACAATGT-CCCTAGATTCAAGTGGG---GGTGGGGAGTCATATTTAAATAATAAG s panTro5.chr2A 90604250 90 + 111504155 CCCAGTA-TAAACCAGAAACAAAGTCTGCAGTAGAAAACTACAATGT-CCCTAGATTCAACTGGG---GGTGGGGAGTCATATTTAAATAATAAG i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102828699 89 + 110113093 CCCAGTA-TAAACCAGAAAC-AAGTCTGTAATAGAAAACTACAATGT-CCCTAGATTCAAGTGGG---GGTGGGGAATCATATTTAAATAATAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178446542 91 + 185818997 CCCAGTA-TAAACCAGAAACAAAGTCTGCAATAAAAAATTACAATGT-CCCTAGATTCAAGTGGG--AGGTGGAGAGTCATATTTAAATAATAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184936273 91 + 192294377 CCCAGTA-TAAACCAGAAACAAAGTCTGCAATAAAAAATTACAATGT-CCCTAGATTCAAGTGGG--AGGTGGAGAGTCATATTTAAATAATAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7904884 91 + 15219753 CCCAGTA-TAAACCAGAAACAAAGTCTGCAATAAAAAATTGCAATGT-CCCTAGATTCAAGTGGG--AGGTGGAAAGTCATATTTAAATAATAAG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9549053 91 + 11639508 CCCAGTA-TAAACCAGAAACAAAGTCTGCAATGAAAAATTACAATGT-CCCTAGATTCAAGTGGG--AGGTGGAGAGTCATATTTAAATAATAAG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120400622 91 + 127223203 CCCAGTA-TAAACCAGAAACAAAGTCTGCAATAAAAAATTATAATGT-CCCTAGATTCAAGTGGG--AGGTGGAGAGTCATATTTAAATAATAAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1526931 91 - 2854183 CCCAGTA-TAAACCAGAAACAAAGTCTGCAATAAAAAATTACAATGT-CCCTAAATTCAAGTGGG--AGGTGGAGAGTCATATTTAAATAATAAG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20233505 91 + 27496150 CCCAGTA-GAAACCAGAAACAAAGTTTGCAGTAAAAAATTACAATGT-CCCTAGATTCAAGTGGG--AGGTGGAGAGTTATATTTAAATAATAAG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33683604 90 - 128169293 CCCAGTA-TAAAACAGAAAC-AAGTCTGCAGGAGAAAACTACAATGTCCCCTCAATTCAAACGGC---AGTGGAGAGTCATATTTAAATAGTAAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17021866 91 + 19594188 CCCAGTA-AAAACCAGAAACAAAGTCTGGAGCAGAAAACTACAATGTCCCCTAAATTCAAGTGGC---AGTGGAGAGTCACATTTAAATAGTAAG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4909714 91 - 11686629 CCCAGTA-TAAACCAGAAACAAACTCTGGAGCAGAAAACTACAATGTCCCCTAAATTCAAGTCGC---AGTGGAGAGTCTTATTTAAATATTAAG i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3258716 92 - 4527795 CCCAGTACTAAACCAGAAACAAAGTCTGCAGCAGAAAACTACAATGTCCCCTAAATTCAAGTGGC---AGTGGAGAGTCATATTTAAATAGTAAG i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16045419 90 + 59632846 CCCAGCA-TAAACCAGAAACAAAGTCTGCA-TAGAAAGCTGCAATATCCCCTAGATTCAAAGAGCATAAATTGTAAGT---ACTTAAAAAAAAAA i canFam3.chr16 C 0 I 126 s dasNov3.JH575209 1220233 90 + 1922530 CCCAATA-TAAACCAGAAA-AAAATCTATACT-GAAAACTGCAAAATTCCCTAGATTCAAATGGG--GAAAGGGGGAACATGTTTAAATCCTATG i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e panPan2.chr7 155957065 1158 + 162613886 M a score=750570.000000 s hg38.chrUn_KI270746v1 45663 92 + 66486 TGCAG-----------------------------------------------------------------------------AAAAACCAAAA---TATTTTAA-AAT---AATTGTCCATGCAAGAAAGAAAACAGTATCATCTAGCTTGAAGACCCACTGTTTTTATTTTATAA s panTro5.chr2A 90604340 92 + 111504155 TGCAG-----------------------------------------------------------------------------AAAAACCAAAA---TATTTTAA-AAT---AATTGTCCATGCAAGAAAGAAAACAGTATCATCTAGCTTGAAGACCCACTGTTTTTATTTTATAA i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102828788 92 + 110113093 TGCAG-----------------------------------------------------------------------------AAAAACCAAAA---TATTTTAA-AAT---AATTGTCCATGCAAGAAAGAAAACAGTATCATCTAGCTTAAAGACCCACTGTTTTTATTTTATAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178446633 92 + 185818997 TGCAG-----------------------------------------------------------------------------AAAAACCAAAA---TATTTTAA-AAT---AATTGTCCATGCAAGAAAGAAAACAGTATCATCTAGCTTGAGGACCCACTGTTTTTATTTTATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184936364 92 + 192294377 TGCAG-----------------------------------------------------------------------------AAAAACCAAAA---TATTTTAA-AAT---AATTGTCCATGCAAGAAAGAAAACAGTATCATCTAGCTTGAGGACCCACTGTTTTTATTTTATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7904975 92 + 15219753 TGCAG-----------------------------------------------------------------------------AAAAACCAAAA---TATTTTAA-AAT---AATTGTCCATGCAAGAAAGAAAACAGTATCATCTAGCTTGAGGACCCACTGTTTTTATTTTATAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9549144 92 + 11639508 TGCAG-----------------------------------------------------------------------------AAAAACCAAAA---TATTTTAA-AAT---AATTGTCCATGCAAGAAAGAAAACAGTATCATCTAGCTTGAGGACCCACTGTTTTTATTTTATAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120400713 92 + 127223203 TGCAG-----------------------------------------------------------------------------AAAAAACAAAA---TATTTTAA-AAT---AACTGTCCATGCAAGAAAGAAAACAGTATCATCTAGCTTGAGGACCCACTGTTTTTATTTTATAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1527022 92 - 2854183 TGCAG-----------------------------------------------------------------------------AAAAACCAAAA---TATTTTAA-AAT---AATTGTCCATGCAAGAAAGAAAACAGTATCATCTAGCTTGAGGACCCACTGTTTTTATTTTCTAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20233596 92 + 27496150 TGCAG-----------------------------------------------------------------------------AAAAACCAAAA---TATTTTAA-AAT---AATTGTCCACGCAAGAAAGAAAACAGTATCATCTAGCTTGAGGACCCACTGTTTTTATTTTATAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33683694 95 - 128169293 TGCAG-----------------------------------------------------------------------------AAAAAACAAAA---TATTTTAA-AATAACAATTGTCCATGCAAGAAAGAAAATAGTATCATCTAGCTTGAGGGCCCATGGtttttattttataa i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17021957 95 + 19594188 CGCAG-----------------------------------------------------------------------------AAAAACCAAAA---TATTTTAA-AATAACAATTGTCAACGCAAGAAAGAAAACAGTATCATCTACCTTGAGGGCCCATTGGTTTTATTTTGTAC i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4909805 94 - 11686629 TGCAG-----------------------------------------------------------------------------TAAAACCAAAA---T-TTTTAA-AATAACAATTGTCCATGCAAGAAAGAAAACAGTATCATCTAGCTTGAGGGCCCATTGTTTTCATTTTATAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3258808 95 - 4527795 TGCAG-----------------------------------------------------------------------------AAAAACCAAAA---TATTTTAA-AATAACAATTATCCATGCAAGAAAGAAAACAGTAGCATCTAGCTTGAGGGCCCATTGTTTTTATTTTATAA i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16045635 167 + 59632846 tgcaggactcgatcccgggaccccaggatcattccctgggccgaaggcagatgctaaatctctgagccacccagggatcccCAAAAATCAAGG---TTTTTAAACAGC---AATTGCATGTGTAAG---GAAAACACTATCATGTAGCTTAATGACCCACTGTTTTCATTTTATAC i canFam3.chr16 I 126 C 0 s dasNov3.JH575209 1220323 90 + 1922530 TGGCA-----------------------------------------------------------------------------AAAAATTGAGACCTTATTTTAATAGC---AATTGTCCTC-----CAAGAAAACGGTATCATATAA-TTGATGGGCCATCCTTTTCATTCTAAAA i dasNov3.JH575209 C 0 I 4 e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e panPan2.chr7 155957065 1158 + 162613886 M a score=4913878.000000 s hg38.chrUn_KI270746v1 45755 635 + 66486 TTTATTTCATGACCTTTAGACTGCTAGAAAAATAAAACCTAACTTGAGGGCA---AAGGTAGTCTTTGAGAAAATATGTGCTATTGTTGCCTGCATAGATAATAGTGTGATTTATCCAGAAGGTGATAGAAA-TATCATTTTCCTAGACGACAGATATAAGCCAAGGAGAATAGAAAGCTCTGACCTAAACTTCACAAGT--GTCCCTTCCAAGCAGGGACACGTAAGAGTAAA-Caaaaaaagaagatcaaattaaactcaaagtgagaagataggaaaaaataaagatgagaatataaatcaataaaac---agaaaggggaaagaaaatagagaaaagtccatgaaaacaaaggctgactcaagaagatcaataagattgataaatctctagacagactgatcaggaaaaaaataagacaagatacaaattattagtatcaagaatgaggaaggtgaaatcactacagattctacaggtattaaaataataagaaacattatgatcaactccattcctttaatttgtcaagatagacgaaatgaacaaatttcttgaaagatgcaaatttatgaaaggagagacagataacctaaa-tag---gtacctattaaagaaataaaatttgttgtt-aaaaactgtccca s panTro5.chr2A 90604432 635 + 111504155 TTTATTTCATGACCTTTAGACTGCTAGAAAAATAAAACCTAACTTGAGGGCA---AAGGTAATCTTTGAGAAAATATGTGCTATTGTTGCCTGCATAGATAATAGTGTGATTTATCCAGAAGGTGATAGAAA-TTTCATTTTCCTAGACCACAGATATAAGCCAAGGAGAATAGAAAGCTCTGACCTAAACTTCACAAGT--GTCCCTTCCAAGTAGGGACACGTAAGAGTAAA-Caaaaaaagaagatcaaattaaactcaaagtgagaagataggaaaaaataaagatgagaatataaatcaataaaac---agaaaggggaaagaaaatagagaaaagtccatgaaaacaaaggctgactcaagaagatcaataagattgataaatctctagccagactgatcaggaaaaaaataagacaagatacaaattattagtatcaagaatgaggaaggtgaaatcactacagattctacaggtattaaaataataagaaacattatgatcaactccattcctttaatttgtcaagatagacaaaatgaacaaatttcttgaaaggtgcaaatttatgcaaggagagacagataacctaaa-tag---gtacctattaaagaaataaaatttgttgtt-aaaaactgtccca i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102828880 633 + 110113093 TTTATTTCATGACCTTTAGACCGCTAGAAAAATAAAACCTACCTTGAGGGCA---AAGGTAATCTATGAGAAAATATGTGCTATTGTTGCCTGCATAGATAATAGTGTGATTTATCCAGAAGGTGATAGAAA-CTTCATTTTCCTAGACCACAGATATAAGCCAAGGAGAATAGAAAGCTCTGACCTAAATTTCACAAGT--GTCCCTTCCAAGCAGGGACACATAAGAGTAAA-Caaaaaaagaagatcaaattaaactcaaagtgagaagataggaaaaaataaagatgcgaatataaatcaataaaac---agaaagggaaaagaaaatagagaaaagtccatgaaaacaaaggctgactcaagaagatcagtaagattgataaatctctagccagactgatcaggaaaaaaataagacaagatacaaattattaatatcaagaatgaggaaggtgaaatcactacagattctacaggtatcaaaataataagaaacattatgaccaactccattcctttaatttgtcaagatagacaaaatgaacaagtttcttgaaagatgcaaatttatgcaaggagagac--ataacctaaa-tag---gtacctattaaagaaataaaatttgttgtt-aaaaaccgtccca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178446725 629 + 185818997 TTTGTTTCATGACCTTTAGACTGCTAGAAAAATAAA--TTACCTTGAGGGCA---AAGGTAAACTTTGAGAAAATAAGTGTTATTGTTGCCTGCATAGATAATAGTGTGATTTATTCAGAAGGTGATAGATA-TTTCATTTTCTTAGACCACAGATGTAAGTCAAG--GAACAGAAAGCTCTGACCTAAACTTCACAAAT--GTCCCTTCCAAACAGGGACACAAAAGAGTAAA-Caaaaaaagaagatcaaattaaactcaaagtgagaagataggaaaaaat--agatgaggatataaatcaataaaac---agaacggggaaagaaaatagagaaaagtccatgaaaacaaaggctgactcaagaagatcaataagattgataaatctctagccagactgatcaggaaaaaaataagacaagatacaaattattagtattgagaataaggaaggtgaaatcactacagattctacaggtattaaaatagtaagaaatactatgatcaactccattcctttaatttgtcaagatagacaaaatgaacaaatctcttgaaagatgcaaatttatgcaaggggagacagataacctaaa-tag---gtacctattaaagaaagaaaatttgttgct-aaaaactgtccca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184936456 629 + 192294377 TTTATTTCATGACCTTTAGACTGCTAGAAAAATAAA--TTACCTTGAGGGCA---AAGGTAAACTTTGAGAAAATAAGTGTTATTGTTGCCTGCATAGATAATAGTGTGATTTATTCAGAAGGTGATAGATA-TTTCATTTTCTTAGACCACAGATGTAAGTCAAG--GAACAGAAAGCTCTGACCTAAACTTCACAAAT--GTCCCTTCCAAACAGGGACACAAAAGAGTAAA-Caaaaaaagaagatcaaattaaactcaaagtgagaagataggaaaaaat--agatgaggatataaatcaataaaac---agaacggggaaagaaaatagagaaaagtccatgaaaacaaaggctgactcaagaagatcaataagattgataaatctctagccagactgatcaggaaaaaaataagacaagatacaaattattagtattgagaataaggaaggtgaaatcactacagattctacaggtattaaaatagtaagaaatattatgatcaactccattcctttaatttgtcaagatagacaaaatgaacaaatctcttgaaagatgcaaatttatgcaaggggagacagataacctaaa-tag---gtacctattaaagaaagaaaatttgttgct-aaaaactgtccca i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7905067 629 + 15219753 TTTATTTCATGACCTTTAGACTGCTAGAAAAATAAA--TTACCTTGAGGGCA---AAGGTAAACTTTGAGAAAATAAGTGTTATTGTTGCCTGCATAGATAATAGTGTGATTTATTCAGAAGGTGATAGATA-TTTCATTTTCTTAGACCACAGATGTAAGTCAAG--GAACAGAAAGCTCTGACCTAAACTTCACAAAT--GTCCCTTCCAAACAGGGACACAAAAGAGTAAA-Caaaaaaagaagatcaaattaaactcaaagtgagaagataggaaaaaat--agatgaggatataaatcaataaaac---agaacggggaaagaaaatagagaaaagtccatgaaaacaaaggctgactcaagaagatcaataagattgataaatctctagccagactgatcaggaaaaaaataagacaagatacaaattattagtattgagaataaggaaggtgaaatcactacagattctacaggtattaaaatagtaagaaatattatgatcaactccattcctttaatttgtcaagatagacaaaatgaacaaatctcttgaaagatgcaaatttatgcaaggggagacagataacctaaa-tag---gtacctattaaagaaagaaaatttgttgct-aaaaactgtccca i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9549236 628 + 11639508 TTTATTTCATGACCTTTAGACTGCTAGAAAAATAAA--TTACCTTGAGGGCA---AAGGTAAACTTTGAGAAAATAAGTGTTATTGTTGCCTGCATAGATAATAGTGTGATTTATTCAGAAGGTGATAGATA-TTTCATTTTCTTAGACCACAGATATAAGTCAAG--GAACAGAAAGCTCTGACCTAAACTTCACAAAT--GTCCCTTCCAAACAGGGACACAAAAGAGTAAA-Caaaaaaagaagatcaaattaaactcaaagtgagaagataggaaaaaat--agatgaggatataaatcaataaaac---agaacggggaacgaaaatagagaaaagtccatgaaaacaaaggctgactcaagaagatcaataagattgataaatctctagccagactgatcaggaaaaaaataagacaagatacaaattattagtattgagaataaggaaggtgaaatcactacagattctacaggtattaaaatagtaagaaatattatgatcaactccattcctttaatttgtcaagatagacaaaatgaacaaatctcttgaaagatgcaaatttatgcaaggggagacagataacctaaa-tag---gtacctatt-aagaaagaaaatttgttgct-aaaaactgtccca i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120400805 629 + 127223203 TTTATTTCATGACTTTTAGACTGCTAGAAAAATAAA--TTACCTTGAGGGCA---AAGGTAAACTTTGAGAAAATAAGTGCTATTGTTGCCTGCATAGATAATACTGTGATTTATTCAGAAGGTGATAGATA-TTTCATTTTCTTAGACCACAGATATAAGCCAAG--GAACAGAAAGCTCTGACCTAAACTTCACAAAT--GTCCCTTCCAAACAGGGACACAAAAGAGTAAA-Caaaaaaagaagatcaaattaaactcaaagtgagaagataggaaaacat--agatgaggatataaatcaataaaac---agaaaggggaaagaaaatagagaaaagtccatgaaaacaaaggctgactcaagaagatcaataagattgataaatctctagccagactaatcaggaaaaaagtaagacaagatacatattattagtattgagaataaggaaggtgaaatcactacagattctacaggtattaaaatagtaagaaatattatgatcaactccattccttttatttgtcaagatagacaaaatgaacaaatctcttgaaagatgcaaatttatgcaaagggagacagataacctaaa-tag---gtacctattaaagaaagaaaatttgttgct-aaaaactgtccca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1527114 628 - 2854183 TTTATTTTATGACCTTTAGACTGCTAGAAAAATAAA--TTACCTTGAGGGCA---AAGGTAAACTTTGAGAAAATAAGTGTTATTGTTGCCTGCATAGATAATAGTGTGATTTATTCAGAAGGTGATAGATA-TTTCATTTTCTTAGACCACAAATATAAGTCAAG--GAACAGAAAGCTCTGACCTAAACTTCACAAAT--GTCCCTTCCAAACAGGGACACAAAAGAGTAAA-Caaaaaaagaagatcaaattaaactcaaagtgagaagataggaaaaaat--agatgaggatataaatcaataaaac---agaacggggaaagaaaatagagaaaagtccatgaaaacaaaggctgactcaagaagatcaataagattgataaatctctagccagactgatcaggaaaaaaataagacaagatacaaattattagcattgagaataaggaaggtgaaatcactacagattctacaggtattaaaatagtaagaaatattatgatcaactccattcctttaatttgtcaagatacacaaaatgaacaaatctcttgaaagatgcaaatttatgcaaggggagacagataacctaaa-tag---gtacctatt-aagaaagaaaatttgttgct-aaaaactgtccca i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20233688 629 + 27496150 TTTATTTCATGACCTTTAGACTGCTAGAAAAATAAA--TTACCTTGAGGGCA---AAGGTAAACTTTGAGAAAATAAGTGCTATTGCTGCCTGCATAGATAATAGTGTGATTTATTCAGAAGGTGATAGATA-TTTCATTTTCTTAGACCACAGATATAAGCCAGG--GAACAGAAAGCTCTGACCTAAACTTCACAAAT--GTCCCTTCCAAACAGGGACACAAAAGAGTAAA-Caaaaaaagaagatcaaattaaactcaaagtgagaagataggaaaaaag--agatgagaatataaatcaataaaac---agaaaggggaaagaaaatagacaaaagtccatgaaaacaatggctgactcaagaagatcaataagattgataaatctctagccagactgatcaggaaaaaaataagacaagatacaaagtattagtattgagaataaggaaggtgaaatcactacagattctacaggtattaaaatagtaagaaatattatgatcaactccattcctttaatttgtcaagatagacaaaatgaacaaatctcttgaaagatgcaaatttatgcaaggggagacaaataacctaaa-tag---gtacctgttaaagaaacaaaatttgttgtt-aaaaaccgaccca i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33683789 631 - 128169293 tttatttCATGACCTTTAGACTGCTAGAAAAATAAAACCTATCTTGAGGACA---AGGGTAATCTTTGAGAAA--ATATGCTATTGTTGCCTGGATAGTTAACACTGTCATCTATCCAGAAGGTGATAGAAA-TTTCACTTTGCTAGACCACACATCTAAGCCAAGGAGAATAGAAAGCTCTGATCTGAAGTTCACAAGT--GTCCCTTCCAAGCAGGGCCACATAAGAGTAAA-CAACaaatgaagatcaaattaaactcaaactgagaagaaaggaaaaaataaagatgagaatataaatcaataaaac---agaaaggaaaaagaacacagagaagagtccatgaaaa-aaaggctgactcaagaagattaataaaattgatacatctctagtaagactgatcaggaaaaaaataaggcaagatacaaattattagtatcaagaataaggaaggtgacatcactacagattctacagtaactaaaataataataaatattattatcaactctattcctttaatttgtcaagttagacaaaatgaacaaatttcctgaaagatgcaaatttatgaaaggggaaata-ataacctaaa-tag---gtacctattaaagacacaaaatttgttgtt-aaaatccacccca i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17022052 628 + 19594188 TTTATTTCATGACCTTTAGACTACTAGAAAAATAAAACCTATCTTGAGGACA---AGGGTAATCTTTGAGAAAACATGTGCTATTGCTGCCTG------TAATAGTGTCATTTGTCCAGAAGGTGATAGAAA-TTTCAGTTTGCTAGACCACAGATCTAAGCCAAGGAGAACAGAAAGCTCTGATCTAAAGTTCACAAGT--GTCCCTTCCAAGCAGGGCCACATAAGAGTAAA-CAACaaacaaagatcaaattaaactcaaagtgagaagaaaggaaaaaataaagatgagaatataaatcaataaaac---agaaaggaaaaagaaaacagagaaaagtccatgaaaacaaaggctgactcaagaagattaataaaattgatacatctctagtaagactgatcaggaaaaaaataaggcaagatacaaattattagtatcaagaataaggaaggtgacatcactacagattctagaggtactaaaataataataaatactatgatcaactctattcctttaatttgtcaagttagacaaaatgaacaaatttcttgaacgatgcaaatttatgcaaggagaaata-ataacctaaa-tag---gtacctactaaagatataaaatttgttgtt-aaaaaccacccca i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4909899 619 - 11686629 TTTATTTCATGACCTTCAGACTGCTAGAAAAATAAAACCTATCTTGAGGACA---AGGGTTATC------------CAGGCTATTGTTGCCTGGATAGCTAATAGTGTCATTTGTCCAGAAAGTGATAGAAA-TTTCACTTTGCTAGACCACAGATCTAAGCCAAGGAGAACAGAAAGCTCTGATCTAAAGTTCACAAGT--GTCCCTTCCAAGCAGGGCCACATAAGAGTAAA-CAACaaacgaagatcaaattaaactccaagtgagaagaaaggaaaaaataaagatgagaatataaatcaataaaac---agaaaggaaaaagaaaacagagaaaagtccatgaaaacaaaggctgactcaagaagattaataaaatggatacatctctagtaagactgatcaggaaaaaaataaggcaagatacaaattattagtatcaagaataaggaaggtgacatcactacagattctggaggtactaa---aataataaatattatgatcaactctattcctttaatttgtcaatttagacaaaatgaacaaatttcttgaaaaatgcaaatttatgcaaggagaaata-acaacctaaa-tag---gtacctattaaagataaaaaattcgttgtt-aaaaaccacccca i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3258903 634 - 4527795 TTTATTTCATGACCTTTAGACTGCTAGAAAAATAAAACCTATCTTGAGGACA---AGGGTAATCTTTGAGAAAGTATGTGCTATTGTTGCCTGGATAGGTAATAGTGTCATTTGTCCAGAAGGTGACAGAAATTTTCACTTTGCTAGACCACAGATCTAAGCCAAGGAGAACAGAAAGCTCTGATCTAAAGTTCACAAGT--GTCCCTTCCAAGCAGGGCCACATAAGAGTAAA-CAACaaatgaagatcaaattaaactcaaagtgagaagaaaggaaaaaataaagatgagaatataaatcaataaaac---aaaaaagaaaaagaaaacagagaaaagtctatgaaagcaaaggctgactcaagaagattaataaaattgatacatctctagtaagactgatcaagaaaaaaataaggcaagatacaaattattagtatcaagaataaggaaggtgacatcactacagattctacaggtactaa---aataataaatattatgatcaactctattcctttaatttgtcaagttagacaaaataaacagttttcttgaaagatgcaagtttatgcaaggagaaata-ataacctaaattag---gtacctattaaagatataaaatttgttgttaaaaaaccactcca i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16045802 603 + 59632846 TTTATTTCATGACCTTTAAATTACTAGATACATAAACCCTAACCTAAGGGTAAAGAAGGCAATCTTTGAGACAGT--GTCCTAGTATTGCCTACATACATCTTAGTCTGATTTATCCTAAAAGTGACAG----TTTTATTTGGCCGGACCACAGATATAAGCCTAAGAAAAAAGAAAGCTTTAACCCAAACCTCAAAAGTGGGGGATTTCCAAGCAAAAACATAAGTAAATAAAGAaaaaaaaggagagcaaattgaactcaaagtgagagga-agaaaacagtcaagatcaaagtggaaatcaatgaaatctaaaatagaggggaaaaaacagagaaaaataaatgaaagcaaaagctggctcaagatg---aataagattgagaaacctgcagcaagaccaaccaggaa-----------aagacacacatcaccaatattgggaatgaggaaggcgacatcattacatattctacagatattataaggataata--------ggccaa----------tagatttgtcaacttacatgaaatggacaaattccttgaaaga--caaattcgtataagg----atagataacctaaa-tagcacatacctaccagagaaactgaatatatagtt-aagaatctttcca i canFam3.chr16 C 0 I 2406 e dasNov3.JH575209 1220413 4 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e panPan2.chr7 155957065 1158 + 162613886 M a score=3636119.000000 s hg38.chrUn_KI270746v1 46390 547 + 66486 ca-ggctgggcactggtggctcatccagtaatcccagcactttgggagac--------------ggatcacctgaagtcaggagttcaagaccagcctggccaacatggcaaaaccacatctctacccaaaacacaaaaattagccaggcatgttggtgcatgccagtaatcccagctactcagaaggctgaggcaggagaattgcttgaacctgggaggtggagtctgtagtgagcagagatcacaccactgcactccagcctgggcatggtggctcatgcctgtaatcccaacactttaggaggccaaggcaggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaacctgtctctact-aaaaatac----aaaaaaaga-------aattatccaggcatggtggcaggcacctg-taatcccagctacccagggggctgaggcaggggaatcacttgagcctgggaggcagtggttgca-tgagctgagattgtgccattgcactccagcctaggcaacaagagtgaaactccatcacaaaag------aaagaaaga s panTro5.chr2A 90605067 550 + 111504155 ca-ggctgggcaccagtggctcatcccataatcccagcactttgggagat--------------ggatcacctgaggtcaggagttcgagaccagcctggccaacatggcgaaaccccatctctacccaaaacacaaaagttagctaggcatgtttgtgcatgccagtaatcccagctactcagaaggctgaggcaggagaattgcttgaacctgggaggtggaggctgtagtgagcagagatcatgccactgcactccagcctgggcatggtggctcacgcctgtaatcccaacactttgggaggccaaggcaggtggatcacatgaggtcaggagttcgagaccagcctggccaacatggtgaaaaactgtctctact-aaaaatacaaaaaaaaaaaaa-------aattagccaggcatggtggcaggcacatg-taatcccagctacccagggggctgaggcaggggaatcacttgaacctgggaggcagtggttgca-tgagctgagattgtgccattgcactccagcctaggcaacaagagcgaaactccatctcaaaag------aaagaaag- i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102829513 543 + 110113093 ca-ggctgggcgccggtggctcatcccgtaatcccagcactttgggaggc--------------ggatcacctgaggccaggagttcgagaccagcctggccaacatggcgaaaccccatctctacccaaaacacaaaaattagccaggcatgttggtgcacgccagtaatcccagctactcagaagactgaggcaggagaattgcttgaacctgggaggtggaggctgtattcagcagagatcacgccactacactccagcctgggcatggtggctcatgcctgtaatcccaacactttgggaggccaaggcaggtggatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaaactgtctctact-aaaaatac---------aaaa-------aattagccaggcgtggtggcaggcacctgataaacgcagctacccagggggctgaggcaggggaatcacttgaacctgggaggcaacggttgca-tgagctgagattgcaccattgcactccagcctaggcaacaagagcaaaactccatctcaaacg------aaagaaaaa i nomLeu3.chr13 C 0 I 1196 s rheMac8.chr3 178447354 542 + 185818997 ta-ggctgggcgc-gatggctcatcctgtaatcccagcacttcgggagtc--------------ggatcatctgaggccaggagttcgagaccagcctggccaacatggcgaaaccccatctctaccaaaaacacaaaaattggccgggcatgttggtgcacacctgtaatcccagctactcagaaggctgaggcaggagaattgcttgaacctgagaggtggaggctgcagtgagcggagatcactccactgcactccagcctgagcgcggtggctcacgcctgtaatcccaacactttgggaggccaaggcaggtggatcacctgagatcggaagtttgagaccagcctggccaacatggtgaaaaattgtctctact-aaaaatac------aaaaaaa-------aattagccaggcgtggtggcgggcacctg-taatcccagctactcagggggctgaggcaggggaatcacttgaacctgggaggcggcagttgca-tgagtcgagatcgcgccattgcaatccagcctgggcaacaagagcgaaattccatctcaaaag------acaaaaa-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184937085 540 + 192294377 ta-ggctgggcgc-ggtggctcatcctgtaatcccagcacttcgggagtc--------------ggatcatctgaggccaggagttcgagaccagcctggccaacatggcgaaaccccatctctaccaaaaacacaaaaattggccgggcatgttggtgcacacctgtaatcccagctactcagaaggctgaggcaggagaattgcttgaacctgggaggtggaggctgcagtgagcggagatcactccactgcactccagcctgagcgcggtggctcacgcctgtaatcccaacactttgggaggccaaggcaggtggatcacctgagatcggaagtttgagaccagcctggccaacatggtgaaaaattgtctctact-aaaaatac------aaaaaaa-------aattagccaggcgtggtggcgggcacctg-taatcccagctactcagggggctgaggcaggggaatcacttgaacctgggaggcggcagttgca-tgagtcgagatcgcgccattgcaatccagcctgggcaacaagagcgaaattccatctcaaaag------ac--aaa-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7905696 538 + 15219753 ta-ggctgggcgc-agtggctcatcctgtaatcccagcacttcgggagtc--------------ggatcatctgaggccaggagttcgagaccagcctggccaacatggcgaaaccccatctctaccaaaaacacaaaaattggccgggcatgttggtgcacacctgtaatcccagctactcagaaggctgaggcaggagaattgcttgaacctgggaggtggaggctgcagtgagcggagatcactccactgcactccagcctgagcgcggtggctcacgcctgtaatcccaacactttgggaggccaaggcaggtggatcacctgagatcggaagtttgagaccagcctggccaacatggtgaaaaattgtctctact-aaaaatac------aaaaaaa-------aattagccaggcttggtggcgggcacctg-taatcccagctactcagggggctgaggcaggggaatcacttgaacctgggaggcggcagttgca-tgagtcgagatcgcgccattgcaatccagcctgggcaacaagagcgaaattccatctcaaaag------ac----a-- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9549864 539 + 11639508 ta-ggctgggcgc-ggtggctcatcctgtaatcccagcacttcaggagtc--------------ggatcatctgaggctaggagttcgagaccagcctggctaacatggtgaaaccccatctctaccaaaaacacaaaaatttgccgggcatgttggtgcacacctgtaatcccagctactcagaaggctgaggcaggagaattgcttgaacctgggaggtggaggctgcagtgagcggagatcactccactgcactccagcccgagcgcggtggctcacgcctgtaatcccaacactttgggaggccaaggcaggtggatcacctgagattggaagttcgagaccagcctggccaacatggtgaaaaattgtctctact-aaaaatac------aaaaaaa-------aattagccaggcgtggtggcggacacctg-taatcccagctactcagggggctgaggcaggggaatcacttgaacctgggaggcggcagttgca-tgagtcgagatcgcgccattgcaatccagcctgggcaacaagagcgaaattccatctcaaaag------ac---aa-- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120401434 537 + 127223203 ta-ggctgggcgc-ggtggctcatcctgtaatcccagcacttcgggagtc--------------ggatcatctgaggccaggagttcaagaccagcctggccaacatggcgaaaccccatctccaccaaaaacacaaaaattagctgggcatgttggtgcacacctgtaatcccagctcctcagaaggctgaggcaggagaattgcttgaacctgggaggtggaggctgcagtgagcggagatcactccactgcactccagcctgagcacagtggctcacgcttgtaatcccaacactttgggaggccaaggcaggtggatcacctgagatcggaagttcgagaccagcctggctaacatggtgaaaaactgtctctact-aaaaatac------aaaaaaa-------aattagccaggtgtggtggcgggcacctg-taatcccagctactcagggggctgaggcaggggaatcacttgaacctgggaggtggcagttgca-tgagtcgagatcgcgccattgcaatccagcctgggcaacaagagcgaaattccatctcaaaag------aa------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1527742 537 - 2854183 ta-ggctgggcgc-ggtggctcatcctgtaatcccagcacttcgggagtc--------------ggatcatctgaggccaggagttcgagaccagcctggccaacatagcgaaaccccatctctaccaaaaacacaaaaattagccgggcatgttggtgcacacctgtaatcccagctactcagaaggctgaggcaggagaattgcttgaacctgggaggcggaggctgcagtgagcggagatcattccactgcactctagcctgagcgcagtggctcacgcctgtaatcccaacactttgggaggccaaggcaggtggatcacctgagatcggaagttcgagaccagcctggccaacatggtgaaaaattgtctctact-aaaaatac------aaaaaaa-------agttagccaggcgtggtggcgggcacctg-taatcccagctactcagggggctgaggcagaggaatcacttgaacctgggaggcggcagttgca-tgagtcgagatcgcgccattgcaatccagcctgggcaacaagagcgaaattccatctcaaaag------ac------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20234317 538 + 27496150 ta-ggctgggcgc-ggtggctcatcctgtaatcccagcactttgggagtc--------------agatcatctgaggccaggagttcgagaccagcctggccaacatggcaaaaccctatctctaccaaaaacacaaaaattagccaggcatgttggtgcacacctgtaatcccagctactcagaaggctgaggcaggagaattgcttgaacctgggaggtggaggctgcagtgagcgcagatcactccactacactcTTGCctgagcgcagtggctcacgcctgtaatcccaacattttgggaggccaaggcaggtggatcacctgagatcggaagttcgagaccagcctggccaacatggtgaaaaattgtctctactaaaaaatac------aaaaaaa-------aattagctaggcgtggtggcgggcacctg-taatcccagctactcagggggctgaggcagaggagtcacttgaacctgggaggtggcagttgca-tgagtcgagatcgtgccattgcaattcagcctgggcaacaagagcgaaattccatctcaaaag------aa------- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33684420 559 - 128169293 cagggttgggtgt-ggtgactcaccttgtaatcccagcattttgggaggccaaggcaggcgaatgaatcatctaaggccaggagttccagaccagcctggccaacatagcaaaaccctatctctaccaaaaacacaaaaattagccaggcatgttggtgtgcacctgtaatcccacctactcagaaggctgaggtgggagaatcgcttgaacccaggagttgaagattgcagtgcgtggagatcacaccactgcactacagactgggtaaggtggctcatg---------ccagcaccttgggaggctgagacaggtggatcccctttagtcaagagttcatgatcaacctggccaacatggtgaaaccctgtctctact-aaaaatac---caaaaaaaaaaaaaaaaaattagttgggcatggcaacaggctcctg-taatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagttgaaatcgcaccatggccctgcagcttgggcaacaagagtgaaattccgtctcaaaag------aaaaaga-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17022680 551 + 19594188 caaggttgggtgt-ggtgactcaccttgtagtcccagtattttcggaggctgaggcagga----gggtcacttgaggccaggagttccagaccagcctggccgacatagcaaaatcctatctctaccaaaaacacaaaaattagccaggcatgttggtttgcacctgtaataccagctactcagaaggctgaggcaggagaatcgcttgaacccaggaggtgaaggttgcagtgagtggagatcatgccactgcacgccagactgggtaaggtgcctcatg---------acagcatcttgggaggctgagacaggtggatcacctgaagtcaagagttcatgaccagcctggccgacatggtaaaaccatgtcactact-aaaaatac------aaaaaaaaaaaaaaaattagttgggcatggcgatgggctcctg-taatctcggctactcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagttgaaatcgcaccatgaccctccagcttgggcaacaagagtgaaattccatctctaaat-------ggaggg-- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4910518 543 - 11686629 cagggttgggcgt-ggtgactcaccttgtaattccagcattttgggaggccgaggcaggt----ggatcacccaaggtcaggagttccagaccagcctggccaacatagcaaaaccctatctctaccaaaaacacaaaaactagccaggcatattggtttgcacctgtaatcccagctactcggaaggctgaggcaggagaatcgcttgaacccaggaggtgaaggttgcagagagtggagatcatgccactgcactccagactgggTAAggtggctcatg---------ccagcatcttgggaggctgagacaggtggatcacttgaagtcaagagttcatgacccgcctggccaacatggtgaagccttgtctctact-aaaaatgc------aaaaaaa----------tagttgggcatggcgatgggctcctg-taatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagttgaaatcgaaccatggccctccagcttgggcaacaagaatgaaattccatctcaaaag-----aaaagagg-- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3259537 544 - 4527795 cagggtagggtgt-ggtgactcaccttgtaatcccagcattttgggaggccgaggcaggc----ggatcacctgaggccaggagttccagaccagcctggccaacacagcaaaaccctatctctaccaaaaacacaaaaattagccaggcatgttggtttgcacctgtaatcccagctactcagaaggctgaggcgggagaatcgcttgaacccagg-------------agtgagtggagatcacgccactgcactccagactgagTAAggtggctcatg---------ccagcaccttgggaggctgagacaggtggatcacctgaagtcaagagttcatgaccagcctggccaacatggtgaaaccctgtctctact-aaaaatac------aaaagaa-aaaaaaaattagttgggcatggcgatgggctcctg-taatcccagctactcgggaggctgaggcaggagaaccacttgaacccgggaggcagaggttgcagtgagttgaaatcgcaccatggccctccagcttgggcaacaagactgaaattccatctcaaaagaagaaaaagaaaa-- i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1220413 4 + 1922530 I e canFam3.chr16 16046405 2406 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e panPan2.chr7 155957065 1158 + 162613886 M a score=409992.000000 s hg38.chrUn_KI270746v1 46937 62 + 66486 aaaaaaaaaagaaaacacaacaaaaacc-ccccacaaagaaaatttcaggccaagatggtttc s panTro5.chr2A 90605617 62 + 111504155 aaaaaaaaaagaaaacacaacaaaaacc-ccccacaaagaaaatttcaggccaagatgatttc i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102831252 48 + 110113093 -AATAAAAAaaaaaa--------------ccccacaaagaaaattccaggccaagatggtttc i nomLeu3.chr13 I 1196 C 0 s rheMac8.chr3 178447896 63 + 185818997 aaaaaaaaaagaaaacaaaacaaaaaccaccccacaaagaaaatttcaggccaagacggtttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184937625 63 + 192294377 aaaaaaaaaagaaaacaaaacaaaaaccaccccacaaagaaaatttcaggccaagacggtttc i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7906234 63 + 15219753 aaaaaaaaaagaaaacaaaacaaaaaccaccccacaaagaaaatttcaggccaagacggtttc i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9550403 63 + 11639508 aaaaaaaaaagaaaacaaaacaaaaaccaccccacaaagaaaatttcaggccaagacggtttc i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120401971 60 + 127223203 aaaaaaaaaagaa---aaaacaaaaaccaccccacaaagaaaatttcaggtcaagatggtttc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1528279 63 - 2854183 aaaaaaaaaagaaaacaaaacaaaaaccaccccacaaagaaaatttcaggccaagacagtttc i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20234855 63 + 27496150 aaaaaaaaaagaaaacaaaacaaaaaccaccccacaaagaaaatttcaggccaagatagttcc i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33684979 63 - 128169293 aaaaaaaaaaaaacagaaaacaaacaccatcctacaaagaaaatttcaggccaagatgctttc i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17023231 63 + 19594188 aaaaaaaaaaaaacggaaaacaaacaccatcccacaaagaaaatttcaagccaagatgctttc i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4911061 63 - 11686629 gggaaaaaaaaaatggaaaacaaacaccatcccacaaagaaaatttcaggccaagatgctttc i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3260081 63 - 4527795 agaaaaaaaaaaacggaaaacaaacaccatcccacaaagaaaatttcaggccaagatgctttc i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1220413 4 + 1922530 I e canFam3.chr16 16046405 2406 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I e panPan2.chr7 155957065 1158 + 162613886 M a score=2127185.000000 s hg38.chrUn_KI270746v1 46999 243 + 66486 actaa-taaattcatgtataatataa-gaagatacatttc-cactactacacaactttttcagaaaactgaagaggagaatatactttctgattcattctatgaagctggagttatgctgataccaaaaccagacgaagacattacaagaatgtaagactacaggcTGgggcatggtgactcacgcctgtaatcccagcattttgggaagccaaggtgggaaaattgcttgagctcagaagttcga s panTro5.chr2A 90605679 243 + 111504155 actaa-taaattcatgtataatataa-gaagatacatttc-cactgctacacaacttttccagaaaactgaagatgagaatatactttctgattcattctatgaagctggagttatgctgataccaaaaccagatgaagacattacaagagtgtaagactacaggcTGgggcatggtgactcacgcctgtaatcccagcattttgggaagccaaggtgggaaaattgcttgagctcagaagttcga i panTro5.chr2A C 0 C 0 s panPan2.chr7 155958223 242 + 162613886 ACTAA-TAAATTAATGTATAATATAA-GAAGATACATTTc-cactactacacaacttttccag-aaactgaagaggagaatatacttcctgattcattctatgaagctgtagttatgctgataccaaaaccagacgaagacattacaagaatgtaacactacaggcTGgggcatggtgactcacgcctgtaatcccagcactttgggaagccaacgtgggaaaactgcttgagctcagaagtttga i panPan2.chr7 M 1158 C 0 s nomLeu3.chr13 102831300 243 + 110113093 actaa-taaattcatgtataatataa-gaagatacatttc-cactactacacaacttttccagaaaactgaagaggagaatatacttccagattcattctatgaagctggagttatgctgataccaaaaccagacaaagacattacgagaatgtaagactacaggcTGgggcatggtgactcacgcctgtaatcccagcactttgggaagccaaggtgggaaaattgcttgagctcagaagttcga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178447959 243 + 185818997 actaa-taaattcatgtataatataa-gaagaaatatttc-cactactacacaactttttcagaaaactgaagaggagaatatacttcctgattcattctaagaagctggagttacgctgataccaaaaccagacgaagacattacaagaatgtaagactacaggcTGgggcatggtgactcatggctgtaatcccagcactttgggaagccaaggtgggaaaactgcttgagctcagaagttcga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184937688 243 + 192294377 actaa-taaattcatgtataatataa-gaagaaatatttc-cactactacacaacttttccagaaaactgaagaggagaatatacttcctgattcattctaagaagctggagttacactgataccaaaaccagacgaagacattacaagaatgtaagactacaggcTGgggcatggtgactcatggctgtaatcccagcactttgggaagccaaggtgggaaaactgcttgagctcagaagttcga i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7906297 243 + 15219753 actaa-taaattcatgtataatataa-gaagaaatatttc-cactactacacaacttttccagaaaactgaagaggagaatatacttcctgattcattctaagaagctggagttacgctgataccaaaaccagaggaagacattacaagaatgtaagactacaggcTGgggcatggtgactcatggctgtaatcccagcactttgggaagccaaggtgggaaaactgcttgagctcagaagttcga i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9550466 243 + 11639508 actaa-taaattcacgtataatataa-gaagaaatatttc-cactactacacaacttttccagaaaactgaagaggagaatatacttcctgattcattctaagaagttggagttacgctgataccaaaaccagacgaagacattacaagaatgtaagactacaggcTGgggcatggtgactcatggctgtaatcccagcactttgggaagccaaggtgggaaaactgcttgagctcagaagttcga i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120402031 242 + 127223203 actaa-taaattcatgtataatataa-gaagaaatatttc-cactactacacaacttttccagaaaactgaagaggagaatat-cttcctgattcattctaagaagctggagttacgctgataccaaaaccagacgaagacattacaagaatgtaagactacaggcTGgggcatggtgactcatggccgtaatcccagcactttgggaagccaaggtggtaaaactgcttgagctcagaagctcga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1528342 243 - 2854183 actaa-taaattcatgtataatataa-gaagaaatatttc-cactactacacaacttttccagaaaactgaagaggagaatatacttcctgattcattctaagaagctggagttacgctgataccaaaaccagacgaagacattacaagaatgtaagactacaggcTGgggcatggtgactcatggctgtaatcccagcactttgggaagccaaggtgggaaaactgcttgagctcagaagttcga i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20234918 243 + 27496150 actaa-taaattcatgtataatttaa-gaagaaatatttc-cactactacacaacttttccagaaaactgaagaggagaatacacttcctgattcattctaagaagctggagttatgctgataccaaaaccagacgaagacattacaagaatgtaagactacaggcTGgggcatggtgactcatggctgtaatcccagcactttgggaagccaaggtgggaaaactgcttgagctcagaagttcga i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33685042 243 - 128169293 accaa-taaattcacgtataatataaggaagaaacgtttg-cactactacacaacttttccagaaaactgaggaggagaatatccttcctgattcattctatgaagctggaattatgctgatatcaaaatcagatgaaaacattacaagaatgtaagactacaggccaggg-atgatgactcatgcctgtaagcccatcactttgggaagccaaggcggaagaactgcttgagctcagaagttcaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17023294 244 + 19594188 actaa-taaattcatgtataatataaggaagaaacattttccactactacacaacttttccagaaaactgaggaggagaatatacttcctgattcattctatgaagctggaattatgctgatatcaaaatcagatgaaaacattacaagaaTGTATGACTACAggccaggg-atggtgactcatgcttgtaatcccagcactttgggaagccaaggtggaagaagtgtttgagctcagaagttcga i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4911124 244 - 11686629 actaattaaattcacgtataatataaggatgaaacgtttc-cactactacacaacttttccagaaaactgagaaggagaatatacttcctgattcattctatgaagctggaattatgctgatatcaaaatcagatgaaaacattacaagaatgtaaggctacaggctgggg-atggtgactcatgcctgtaatcccagcactttgggaagccaaggtggaagaactgcttgagctcagaagttcga i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3260144 243 - 4527795 actaa-taaattcatgtataatataaggaagaaacatttc-cactactacacaacttttccagaaaactgaggaggagaatatacctcctgattcattctatgaagttggaattatgctgatatcaaaatcagatgaaaacattacaagaatgtaagactacaggctgggg-atggtgactcatgcctgtaattccagcactttgggaagtcaaggtggaagaactgcttgagctcagaagttcaa i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1220413 4 + 1922530 I e canFam3.chr16 16046405 2406 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5476101 844 - 12253515 I a score=5421062.000000 s hg38.chrUn_KI270746v1 47242 674 + 66486 gaccagcctggacaacatagtgagatgctgtctctatcaaaaattttaaaaaagtagttgggtgtg------gtggcacacacttatggtcccagctacttgggagacggaggtgggaggtc------------aaagctggagttagctatgatc----gcaccactgcac-tccag-ccaggaattagaacgagaacctgtctcag--gaaaaaaaaaga------------ag--aaaaaaaaGTGCACAGGT-----CTACaaccg-----tggtgc-------------------atccacagtttaattaatacac--------------------------------------agcaagaaaagggagtacactgttaa------caaat-acaacagcatagatgaatctccaaataattgtgct----gaaataaatcagtgcaaaaagcatacagttctgtatgattccacttatatacaactttagaaaatgcaaactaatc------------------------------ttggggacaaggacggatggc-gggggaatgcagaaaattacagagggacatgaagaaacgttgggagatgaatatattcactgtcatgattgtggtatcgttttcaagg-gtg--tatatatatatatcaaagctgatggaattgtacatgtcaagtcaaa----tatagctta------tatcaactatacctcaataagcctggttttaaaaTTTTTCTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------TGAGAATCTAACCTTCCTTATTC---CTGGTTTATTAGTAAACTTGAACAATTTCACCTG s panTro5.chr2A 90605922 671 + 111504155 gaccagcctggacaacatagtgagatgctgtctctattaaaaattttaaaaaagtagttgggtgtg------ttggcacacagctatggtcccagctacttgggagacagaggtgggaggtc------------aaagctggagttagctatgatc----gcaccactgcac-tccag-ccaggaattagaacaagaacctgtctcag-aaaaaaaaaaaga------------ag--aaaaaaaaGTGCACAGGT-----CTACaaccg-----tggtgc-------------------atccacagttttattaatactc--------------------------------------agcaagaaaaggaagtacactgttaa------caagt-acaacagcatagattaatctctaaataattgtgct----gaaataaatcagtcccaaaagcacacagttctgtatgattccacttatatacaactctagaaaatgcaaactaatc------------------------------ttggggacaaggatggatggcagggggaatgcagaaaattacagagggacatgaagaaacgttgggagatgaatatattcactatcatgattgtggtatcgttttcaagg-gtg--tatatgtatatatcaaagcttatggaattgtacat-----gtcaaa----tatagctta------tatcaactatacctcaataagcctggttttaaaaTTTTTCTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CGAGAATCTAAGCTTCCTTATTC---CTGGTTTAGTAGTAAACTTGAACAATTTCACCTG i panTro5.chr2A C 0 C 0 s panPan2.chr7 155958465 676 + 162613886 gaccagcctggacaacacagtgagatgctgtctctattaaaaattttaaaaaaggagttgggtgtg------gtggcacacacctctgggcccagctacttgggagacggaggtgggaggtc------------gaagctagagttagctatgatc----gcaccactgcac-tccag-ccaggaattagaatgataacctgtctcagaaaaaaaaagaaga------------agaaaaaaaaaaGTGCACAGGT-----CTACaacca-----tggtgc-------------------atccacagttttattaatactc--------------------------------------agcaagaaaagggagtacactgttaa------caaac-gcaacagcacagatgaatctccaaataattgtgct----gaaataaatcagtccaaaaagtgtacagttctgtatggctccacttatatacaactctagaaaatgcaaactaatc------------------------------ttggggacaaggatggatggcagggggaatgcagaaaattacagaggggcatgaagaagctttgggagatgaatatattcactatcatgattgtggtatcgttttcaagg-gtgtatatatatatatatcaaagcttatggaattgtacat-----gtcaaa----tatagctta------tatcaactgtacctcaataagcctggttttaaaaTTTTTCTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGCTTCCTTATTC---CTGGTTTAGTAGTAAACTTGAACAATTTCACCTG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102831543 672 + 110113093 gaccagcctggacaacatagtgagatgctgtctctattaaaaatttttaaaaagtagttgggtgtg------gtggcacacacctatggtcccagctacttgggagacggaggtaggaggtc------------gaagctggagttagctatgatc----gcaccactgcac-tccagcccaggaattagaatgagaacctgtctcag-aaaaaaaaaaaga------------agaagaaaaaaaGTGCACAGGT-----CTACaaccg-----tggtgc-------------------atccacagttttattaatactc--------------------------------------agcaagaaaaggtagtacactgttaa------caaat-ccaacagcatagatgaatctccaaataattgtgct----gaaataaatcagtccaaaaagcatacagttctgtactattccacttatatacaactctagaaaatgcaaactgatc------------------------------ttggggacaaggacggatggcagagggaatgcagaaaattacagaggggcatgaagaaactttgggagatgaatatattcactatcatgattgtggtattattttcaagg-gtg----tatatatatatcaaagcttatgaaattgtacat-----gtcaaa----tatagctta------tatcaactatacctcaataagcctggttttaaaaTTTTTCTTTTT-----------------------G-AAAAAGGGA--------------------------------------------------------------------TGAGAATCTAAGCTTCCTTATTC---CTGGTTTAGTAGTAAACTTGAATAATTTCAACTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178448202 683 + 185818997 gaccagcctggacaacatagtgagatgctgtctctattaaaaatttttaaaaggtagttggatgtatgtagtaggacacacacctatggtcccggctacttgggagatggaggtgggaggtc------------gaatctggagtgagctatgatc----ataccactgcac-tccagcccaggaattagaacaagaacctttctcagaaaaaaaaagaagg------------aaaaaaaaaaaaGTGCACAGGT-----CTACaaccg-----tggtgc-------------------atacacagttttattaatactc--------------------------------------agcaagaaaagggagtaccctgttaa------caaacggcaacagcatagatgaatctccaaataattgtgct----gaaataaatcagtccaaaaagcatacaattctgtatgattccacttacatacaactctagaaaatgcaaactaatc------------------------------ttggggacgaggacggatggcaggggaaatgcagaaaattacagaggggcatgaagaaactttgggagatgaatatattcactatcatcattgtggtttcgttttcaagg-gtg----tatacatatatcaaagcttatggaattgtacat-----gtcaaa----tatagctta------tatcaactatacctcaataagccttgttttaaaaTTTTTCTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGCTTCCTTACTCCTCCTGGTTTAGTAGTAAACTTGGACAATTTCACTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184937931 683 + 192294377 gaccagcctggacaacatagtgagatgctgtctctattaaaaatttttaaaaggtagttggatgtatgtagtaggacacacacctatggtcccggctacttgggagatggaggtgggaggtc------------gaatctggagtgagctatgatc----ataccactgcac-tccagcccaggaattagaacaagaacctgtctcagaaaaaaaaagaagg------------aaaaaaaaaaaaGTGCACAGGT-----CTACaaccg-----tggtgc-------------------atacacagttttattaatactc--------------------------------------agcaagaaaagggagtacactgttaa------caaacggcaacagcatagatgaatctccaaataattgtgct----gaaataaatcagtccaaaaagcatacaattctgtatgattccacttacatacaactctagaaaatgcaaactaatc------------------------------ttggggacgaggacggatggcaggggaaatgcagaaaattacagaggggcatgaagaaactttgggagatgaatatattcactatcatcattgtggtttcgttttcaagg-gtg----tatacatatatcaaagcttatggaattgtacat-----gtcaaa----tatagctta------tatcaactatacctcaataagccttgttttaaaaTTTTTCTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGCTTCCTTACTCCTCCTGGTTTAGTAGTAAACTTGGACAATTTCACTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7906540 683 + 15219753 gaccagcctggacaacatagtgagatgctgtctctattaaaaatttttaaaatgtagttggatgtatgtagtaggacacacacctatggtcccagctacttgggagacggaggtgggaggtc------------gaatctggagtgagctatgatc----ataccactgcac-tccagcccaggaattagaacaagaacctgtctcagaaaaaaaaagaagg------------aaaaaaaaaaaaGTGCACAGGT-----CTACaaccg-----tggtgc-------------------atacacagttttattaatactc--------------------------------------agcaagaaaagggagtacactgttaa------caaacggcaacagcatagatgaatctccaaataattgtgct----gaaataaatcagtccaaaaagcatacaattctgtatgattccacttacatacaactctagaatatgcaaactaatc------------------------------ttggggacgaggacggatggcagggggaatgcagaaaattacagaggggcatgaagaaactttgggagatgaatatattcactatcatcattgtggtttcgttttcaagg-gtg----tatacatatatcaaagcttatggaattgtacat-----gtcaaa----tatagctta------tatcaactatacctcaataagccttgttttaaaaTTTTTCTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGCTTCCTTACTCCTCCTGGTTTAGTAGTAAACTTGGACAATTTCACTTG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9550709 682 + 11639508 gaccagcctggacaacatagtgagatgctgtctctattaaaaatttttaaaaagtagtcggatgtatgtagtaggacacacacctatggtcccagctacttaggagacggaggtgggaggtc------------gaatctggagtgagctatgatc----ataccaccgcac-tccagcccaggaattagaacaagaacctgtctcagaaaaaaaaagaa-g------------aaaaaaaaaaaaGTGCACAGGT-----CTACaaccg-----tggtgc-------------------atccacagttttattaatactc--------------------------------------agcaagaaaagggagtacactgttaa------caaatggcaacagcatagatgaatctccaaataattgtgct----gaaataaatcagtccaaaaagcatacaattctgtatgattccacttacatacaactctagaaaatgcaaactaatc------------------------------ttggggacgaggacggatggcaaggggaatgcagaaaattacagaggggcatgaagaaactttgggagatgaatatattcactatcatcattgtggtttcgttttcaagg-gtg----tatacatatatcaaagcttatggaattgtacat-----gtcaaa----tatagctta------tatcaactatacctcaataagccttgttttaaaaCTTTTCTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGCTTCCTTACTCCTTCTGGTTTAGCAGTAAACTTGGACAATTTCACTTG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120402273 682 + 127223203 gaccagcctggacaacatagtgagatgctgtctctattaaaaatttttaaaaagcagttggatgtatgtagtaggacacacacctatggtcccagctccttgggagacggaggtgggaggtc------------gaatctggagtgagctatgatc----acaccaccgcac-tccaacccaggaattagaacaagaacctgtctcagaaaaaaaaaaaaagaaGGA-------AAAAAAAAAAAAGTGCCCAGGT-----CTACaaccg-----tggtgc-------------------atccacagttttattaatactc--------------------------------------agcaagaaaagggagtacactgttaa------c-----gcaacagcatagatgaatctccaaataattgtgcg----gaaataaatcagtccaaaaagcgtacaattctgtatgattccacttacatacaactctagaaaatgcaaactaatc------------------------------ttggggacgaggatggatggcagggggaatgcagaaaattacagcgcggcatgaagaaactttgggagatgaatatattcactatcatcgttgtggtatcgttttcaagg-gtg----tatacatatatcaaagcttatggaattgtacat-----gtcaaa----tatagctta------tatcaactatacctcaataagcctggttttaaaaTTTTT-TTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGCTTCCTTACTCCTTCTGGTTTAGTAGTAAACTTGAACAATTTCACCTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1528585 682 - 2854183 gaccagcctggacaacatagtgagatgctgtctctattaaaaatttttaaaaagtagttggatgtatgtagtaggacacacacctatggtcccagctacttgggagacggaggtgggaggtc------------gaatctggagtgagctatgatc----ataccaccgcac-tccagcccaggaattagaacaagaacctgtctcagaaaaaaaaagaagg-------------aaaaaaaaaaaGTGCACAGGT-----CTACaaccg-----tggtgc-------------------atccacagttttattaatactc--------------------------------------agcaagaaaagggagtacactgttaa------caaacggcaacagcatagatgaatctccaaataattgtgct----gaaataaatcagtccaaaaagcatacaattctgtatgattccacttacatacaactctagaaaatgcaaactaatc------------------------------ttggggacgaggacggatggcagggggaatgcagaaaattacagaggggcatgaagaaactttgggagatgaatatattcactatcatcattgtggtttcgttttcaaga-gtg----tatacatatatcaaagcttatggaattgtacat-----gtcaaa----tatagctta------tatcaactatacctcaataagccttgttttaaaaTTTTTCTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGCTTCCTTACTCCTTCTGGTTTAGTAGTAAACTTGGACAATTTCACTTG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20235161 679 + 27496150 gaccaacctggacaacatagtgagatgctgtctctatgaaaaatttttaaaaaggagttggatgtatgtagtaggacacacacccatggtcccagctacttgggagatggaggtgggaggtc------------gaatctggagtgagctatgatc----acaccaccgcac-tccagcccagaaattagaacaagaacctgtctcagaaaaaaaaaagaag-------------gaaaACAAAAAGTGCACAAGT-----CTACaaccg-----tggtgc-------------------atc--cagttttattaatactc--------------------------------------agcaagaaaagggagtacactgttaa------caaac-gcaacagcatagatgaatctccaaataattgtgct----gaaataaatcagtccaaaaagcgtacaattctgtaggattccacttatatacaactctagaaaatgcaaactaatc------------------------------ttggaaacgaggatggatggcagagggaatgcagaaaattacaaaggggcatgaagaaactttgggagatgaatatattcactatcatgattgtggcatcgttttcaagg-gta----tatacatatatcaaagcttatggaattgtacat-----gtcaaa----tatagctta------tatcaactatacctcaataagcctggttttaaaaTTTTTCTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGCTTCCTTACTCCTTCTGGCTTAGTAGTAAACTTGAATAATTTCACCTG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33685285 652 - 128169293 gaccagcctggacatcatagcaagacattgtctccatt-aaaatttttaaaaattagctgggtggg------gtggtgcatacctatggtcccagctacctgggaaacgggggtgagaggtc------------gaagctggagtgaactataatc----acaccactgcac-tccagcctggaa-----aatgagaccctgtctcagaaaaTA---------------------TTTTTTAAAAAGTGCACAGGT-----CTACaaccg-----tggtgc-------------------atccacagttttattaataatc--------------------------------------agcaacaaaaaggagtgcactgttaa------caaat-gcagcagcatagaagaatctcaaaacaattgtgtt--aaaaaaaaaatcagtccaaaaagtgtacaattctgtatgattccacttatatacaactctagaaaatgcaaactaatc------------------------------ttggggacaacaatggacggcaggggggttgcaga----------ggggcataaagaaactttgggagatgaatatattcactatcatgattgtggtatggttttcaaggtgtg----gatacatatatcaaaacttaagaaattatacat-----gtcaaa----catagctta------tatcaactatacctcaataagcctgctttaaaaTTTTTCCTTTTT-----------------------GAAAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGCTCCCTTACTC---CTGGTTTAGTAGTAAACTTGAACAATTTCACCTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17023538 652 + 19594188 gatcagcctggacaacatagcaagacactctctctatt-aaaatttttaaaaattagctgggtgtg------gtagtgcatacctactgtcccagctacctgggaaatggaggtgagaggtc------------aaagctggagtgaactatagtc----acaccactgcac-tccagcctggaa-----aatgagaccctgtctcagaaaaGA--------------------TTTTTTTTTTAAGTACACAGGT-----CTACAACCA-----tggtgc-------------------atccacacttttattaataatc--------------------------------------agcaacaaaaaggagtacattgttaa------caaat-gcagcagcatagaagaatctcaaagtaattatgct-aaaaaaaaaaatcagtccaaaaatcgtacaattctttatgattccacttatatacaactctagaaaatgcaaactagtc------------------------------ttggggacaaggatggacggtaggggggatgcaga----------ggggcataaagacactttgggagatgaatatattcactatcatgattgtggtatggttttcaagg-gtg----tatacatatatcaaaactaaagaaattatacat-----gtcaaa----catagctta------tatcaactatacctcaataagcctgctttaaaaTTTTTCCTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGCTCCCTTACTC---CTGGTTTAGTAGTAAACTTGAACAATTTCATCTG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4911368 641 - 11686629 catcagcctggacaacatagcaagacactgtctctatt-aagattttaaaaaattagctgggtgtg------gtggtgcatacctatggtcccagctacct-ggaaacggaggtgagaggtc------------gaagttggagtgaactataatc----acaccactgcacttccagcctggaa-----aatgagaccctgtctcagaaaaa------------------------TTTTTAAAAGTGCACAGGT-----CTACaacca-----tggtgc-------------------atccacagttttattaataatc--------------------------------------agcaacaaaaacgagtgcatcgttaa------caaat-acagcagcatagaagaatctcaaaataattgtgct---aaaaaaaaatcagtccaaaaagtgtacagttctgtatgattccacttatacacaactctagaaaatgcaaactaatc------------------------------ttagggacaaggatggacagcaggggggatacaaa----------ggggcataaagacactttgggagatgaatatactcactatcatgattgtggtatggttttcaagg-gtg----tatacatatatcaaaacttaagaaattatacat-----gtcaaa----catagctta------tatcaactatacctcaataagcctgctttaaaaTTTTTCCTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGC-----TACTC---CTGGTTTAGTAGTAAACTTGAACAATTTCACCTG i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3260387 648 - 4527795 gatcagcctggacaacacagcaagacactgtctctatt-aaaattttttttaattagctgggtgtg------gtggagcatacctatggtcccagctacctggtaaatggaggtgagaggtc------------gaagctggagtgaactataatc----acaccactgcac-tccagcctggaa-----aatgagaccctgtctcagaaaaaa---------------------TTTTTTAAAAAGTGCACAGGT-----CTACaacca-----tggtgc-------------------atccgcagttttattaataatc--------------------------------------agcaacaaaaaggagtgcactgttaa------caaat-gcagcagcatagaagaatctcaaaataactgtgct----aaaaaaaatcagtccaaaaagtgtacaattctgtatgattgcacttacatacaactctagaaaatgcaaactaatc------------------------------ttggagacaaggatggacagcagggaggatgcaga----------ggggtataaagaaactttgggagatgaatatattcactatcatgattgtggtacagttttcaagg-gtg----tatacatatatcaaaacttaagaaattacacat-----gtcaaa----catagctta------tatcaactatacctcaataagcctattttaaaaTTTTTACTTTTT-----------------------G-AAAAAAGGA--------------------------------------------------------------------CAAGAATCTAAGTTCCCTCCCTC---CTGGTTTAGTAGTAAACTTGAACAATTTCACCTG i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5476945 863 - 12253515 gacccgccaaaacaaca-------atgacggctgcaaccaaaa----aaaaaaatagccgggcact------gtggcaggcgcctttggtcccagctacttgggaggtggaggcagaagactcgcctgagcccaggagttggaggttgctgtgagctgtaatgccacggcac-tctacccacggggacagcttgaggctctgtctcaaaaataaataaataaataaaaattctcagtaaattatgaatggaaaggtacttcctcaaactgacttaagatgcctattaaaaaacaaaaaaactctacagttaacacaatacttaatcacgtaaaactaaatgctttctccctaatattaaaaacaagggaaggatttcTAATTTTAAATATTCCACAA-CAaacagcacagacgaatctc-----aattatgctgaatgaaatgaatcagaccaaaaacagtata-ttctgt--tattccatttacataaaactctaggaaatgtcaactaatctacagtgaagaaaatcaggtaagtcactggttgaggacaaggacaggtggcatgggaagt-----------cagagtggcatgaggaaactctggga-atgaacctatttactgt----gctaaggtatgattttcaaag-aca----catacatatgtcaaaacttacaaaactgtacat-----gtcaaatatttatagcttattttattatcaattata---cAATAAGCCTTGTTTTTAAACTTTCCTTTTTATTTATTTCAGATTAATATGAGGG-AACAAATGATTAACTTACATTGTTTGTGTTTAAGTAAAGTCCAAATTGCAGTTGAGCCCTTCACCCAGGAGGTTGTGCCAGAATCTAAGTTTTCTTATTC---CTAGTTTAGCAGTAA--------AATTTCACCTA i otoGar3.GL873572 I 844 C 0 e dasNov3.JH575209 1220413 4 + 1922530 I e canFam3.chr16 16046405 2406 + 59632846 I e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=1627816.000000 s hg38.chrUn_KI270746v1 47916 178 + 66486 TCTCCTATACTTAAAATGACATTTCAGAATTTTAAAAACAGGATTTTAATAAAATAGCGAAGTTATTACAT--AAAATATTTGCTAGTAGTTAGCAAATGTA-----TTTGTAATACACATACAAATAAAGCTTCATA-ACATGATAGTAAGCAAATATCTATCAATC-----TTAAAATTTTTTAAATAA-------- s panTro5.chr2A 90606593 174 + 111504155 TCTCCTATACTTAAAATGACATTTCAGAATTTTAAAAACAGGATTTTAATAAAATAGCGAAGTTATTACAT--AAAATATTTGCTAGTAGTTAACAAATATA-----TTTGTAATACACATAGAAATAAAGCCTCATA-ACATGATAGTAAGCAAA----TATCAATC-----TTAAAATTTTTTAAATAA-------- i panTro5.chr2A C 0 C 0 s panPan2.chr7 155959141 178 + 162613886 TCTCCTATACTTAAAATGACATTTCAGAATTTTAAAAACAGGATTTTAATAAAATAGCGAAGTTATTACAT--AAAATATTTGCTAGTAGTTAGCAAATATA-----TTTGTAATACACATATAAATAAAGCCTCATA-ACATGATAGTAAGCAAATATCTATCAATC-----TTAAAATTTTTTAAATAA-------- i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102832215 178 + 110113093 TCTCCTATACTTAAAATGACATTTCAGAATTTTAAAAACAGGATTTTAATAAAATAGCAAAGTTATTACAT--AAAACATTTGCTAGTAGTTAGCAAATACA-----TTTGTAATACACATATAAATAAAGCCTCATA-ACATGATAGTAAGCAAATACCTATCAATC-----TTGAAATTTTTTAAATAA-------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178448885 166 + 185818997 -------TACTTAAAATGACATTTCAGAATTTTAAAAATAGGATTTTAATAAAATAGTGAAGTTATTACAC--AAAATATTTGCTAGTAGTTAGCAAATATG-----TTTGTAATGCACAT----ATAAAGCCTCATA-ACATGATA-TAAGCAAATATCTATCAATC-----TTAAAATTTTTTAAATGA-------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184938614 170 + 192294377 -------TACTTAAAATGACATTTCAGAATTTTAAAAATAGGATTTTAATAAAATAGTGAAGTTATTACAC--AAAATATTTGCTAGTAGTTAGCAAATATG-----TTTGTAATGCACATATAAATAAAGCCTCATA-ACATGATA-TAAACAAATATCTATCAATC-----TTAAAATTTTTTAAATGA-------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7907223 170 + 15219753 -------TACTTAAAATGACATTTCAGAATTTTAAAAATAGGATTTTAATAAAATAGTGAAGTTATTACAC--AAAATATTTGCTAGTAGTTAGCAAATATG-----TTTGTAATGCACATATAAATAAAGCCTCATA-ACATGATA-TAAGCAAATATCTATCAATC-----TTAAAATTTTTTAAATAA-------- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9551391 165 + 11639508 -------TACTTAAAATGACATTTCAGAATTTTAAAAATAGGATTTTAATAAAATAGTGAAGTTATTACAC--AAAATATTTGCTAGTAGTTAGTAAATATA-----TTTGTAATGCACAT----ATAAAGCCTCATA-ACATGATA-TAAGCAAATATC-ATCAATC-----TTAAAATTTTTTAAATAA-------- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120402955 166 + 127223203 -------TACTTAAAATGACATTTCAGAATTTTAAAAACAGGATTTTAATAAAATAGCGAAGTTATTACAT--AAAATATCTGCTAGTAGTTAGCAAATATA-----TTTGTAATGCACATATAAATAAAGCCTCATA-ACATGATA-TAAGCAAAT----ATCAATC-----TTAAAATTTTTAAAATAA-------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1529267 169 - 2854183 -------TACTTAAAATGACATTTCAGAATTTTAAAAATAGGATTTTAATAAAATAGTGAAGTTATTACAC--AAAATATTTGCTAGTAGTTAGCAAATATA-----TTTGTAATGCACATATAAATAAAGCCTCATA-ACATGATA-TAAGCAAATATC-ATCAATC-----TTAAAATTTTTTAAATAA-------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20235840 170 + 27496150 -------TACTTAAAATGACATTTCAGAATTTTAAAAACAGGATTTTAATAAAATAGCGAAGTTATTACAT--AAAATATTTGCTAGTAGTTAGCAAATATA-----TTTGTAATGCACATATAAATAAAGCCTCATA-ACATGATA-TAAGCAAATATCTATCAATC-----TTAAAATTTTTTAAATAA-------- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33685937 178 - 128169293 TCTCTTGAACTTAACATGACATTTCAGAATTTAAAAGACAGGATTTTAATAAAATAGCAAAGTTGTCACAT--AAAATATTTGCCAGTAGTTAGCAAACATA-----TTTGTAATGCACATCTAAATAAAGCCTCATA-ACATGCCAATAAGCAAATATTTATCAATC-----TTAAAATTTTTTAAATAA-------- i calJac3.chr8 C 0 I 300 s saiBol1.JH378140 17024190 178 + 19594188 TCTCCTGAACTTAAAATGACATTTCAGAATTTAAAAGACAGGATTTTAATAAAATAGCAAAGTTGTTACAT--AAAATATTTGCCAGTAGTTAGCAAATATA-----TTTGTAATGCACATCTAAATAAAGCCGCATA-ACATGCCAATAAGCAAATATTTATCAATC-----TTAAAATTTTTTAAATAA-------- i saiBol1.JH378140 C 0 I 303 s cebCap1.NW_016107335v1 4912009 180 - 11686629 TCTCCTGAACTTAAAATGACATTTCAGAATTTAAAAGACAGGATTTTAATAAAATAGCAAAGTTGTTACATTAAAAATATTTGCCAGTAGTTAGCAAATATA-----TTTGTAATGCACATCTAAATAAAGCCTCGTA-ACATGCCAATAAGCGAATATTTATCAGTC-----TTGAAATTTTTTAAATAA-------- i cebCap1.NW_016107335v1 C 0 I 311 s aotNan1.NW_018506100v1 3261035 177 - 4527795 TCTCCTGAACTTAAAATGACATTTCAGAATTTAAAAGACAGGATTTTAATAAAATA-CAAAGTTGTTGCAT--AAAATATTTGCCAGTAGTTAGCAAATATA-----TTTGTAATGCACATCTAAATAAAGCCTCATA-ACATGCCAATAAGCAAATATTTATCAATC-----TTAAAATTTTTTAAATAA-------- i aotNan1.NW_018506100v1 C 0 I 310 s otoGar3.GL873572 5477808 165 - 12253515 CATCCT-AACTTCAAATGAC-------TATTTGAAGAACAGGATTTCAGTGAAATAGTAAAATTACTA-AT--AAAATACTTGCTGATAGTTACCAATTAGA-----TTT-TAGCACAAATCTAAAGAAAGCCTCGTA-AGATACCAACAGACAAATATTTATCAATC-----GT---ATCTTTTAAAAAG-------- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16048811 196 + 59632846 TCTCCTGAACTTAAAATGACAATT-AGAATTTGAAAAACAGGATTTTGGTAAAATAGTAAAGTTACCACAT--GAAATATTTGCCACTCTTTGCCAAATACAGATTTTTTTCAATACACACTTAAATAAAGCCTCATATACATGCCATTGAGCAAATACTGATCAATCCTGAATTAAAATATATCAAAGACAGTCATAA i canFam3.chr16 I 2406 C 0 e dasNov3.JH575209 1220413 4 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=14196.000000 s hg38.chrUn_KI270746v1 48094 2 + 66486 AA s panTro5.chr2A 90606767 2 + 111504155 AA i panTro5.chr2A C 0 C 0 s panPan2.chr7 155959319 2 + 162613886 AA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102832393 2 + 110113093 AA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178449051 2 + 185818997 AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184938784 2 + 192294377 AA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7907393 2 + 15219753 AA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9551556 2 + 11639508 AA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120403121 2 + 127223203 AA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1529436 2 - 2854183 AA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20236010 2 + 27496150 AA i colAng1.NW_012115154v1 C 0 C 0 s otoGar3.GL873572 5477973 2 - 12253515 AA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16049007 2 + 59632846 AA i canFam3.chr16 C 0 I 15 e dasNov3.JH575209 1220413 4 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e aotNan1.NW_018506100v1 3261212 310 - 4527795 I e cebCap1.NW_016107335v1 4912189 311 - 11686629 I e saiBol1.JH378140 17024368 303 + 19594188 I e calJac3.chr8 33686115 300 - 128169293 I a score=29342.000000 s hg38.chrUn_KI270746v1 48096 7 + 66486 GA--------------GCAAC---------------------- s panTro5.chr2A 90606769 7 + 111504155 GA--------------GCAAC---------------------- i panTro5.chr2A C 0 C 0 s panPan2.chr7 155959321 7 + 162613886 GA--------------GCAAC---------------------- i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102832395 7 + 110113093 GA--------------GCAAC---------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178449053 7 + 185818997 GA--------------GCAAC---------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184938786 7 + 192294377 GA--------------GCAAC---------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7907395 7 + 15219753 GA--------------GCAAC---------------------- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9551558 7 + 11639508 GA--------------GCAAC---------------------- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120403123 7 + 127223203 GA--------------GCAAC---------------------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1529438 7 - 2854183 GA--------------GCAAC---------------------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20236012 7 + 27496150 GA--------------GCAAC---------------------- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33686415 7 - 128169293 GA--------------GCGTA---------------------- i calJac3.chr8 I 300 C 0 s saiBol1.JH378140 17024671 7 + 19594188 GA--------------GCATA---------------------- i saiBol1.JH378140 I 303 C 0 s otoGar3.GL873572 5477975 7 - 12253515 GA--------------GCAAA---------------------- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16049024 43 + 59632846 GAGTATGTACTAATCTGCAACATTTCTAGTTTCTTCTGTAAGC i canFam3.chr16 I 15 C 0 e dasNov3.JH575209 1220413 4 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e aotNan1.NW_018506100v1 3261212 310 - 4527795 I e cebCap1.NW_016107335v1 4912189 311 - 11686629 I a score=953261.000000 s hg38.chrUn_KI270746v1 48103 123 + 66486 TATATTACAT------------------------------------------------------------AATGACTTTT-----------------------TAGAGAGGGTTGGCATAGaaagataaggagtcaaagaggaaggtaagaaaagag--a--aagggtgag--------------aaagt---aaatatacaagaAAATGT---AACCAGAGGCTC---AAAA s panTro5.chr2A 90606776 123 + 111504155 TATATTACAT------------------------------------------------------------ACTGACTTTT-----------------------TAGAGAGGGTTGGCATAGAAAGATAAGGAGTCAAAGAGGAAGGTAAGAAAAGAG--A--CAGGATGAG--------------AAAGT---AAATATACAAGAAAACGT---AACCAGAGGCTC---aaaa i panTro5.chr2A C 0 C 0 s panPan2.chr7 155959328 123 + 162613886 TATATTACAT------------------------------------------------------------ACTGACTTTT-----------------------TAGAGAGGGTTGGCATAGaaagataaggagtcaaagaggaaggtaagaaaagag--a--aaggatgag--------------aaagt---aaatatacaagaAAACAT---AACCAGAGGCTC---AAAA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102832402 119 + 110113093 TATATTACAT----------------------------------------------------------------ACTTTT-----------------------TAGAGAGGGTTGGCATAGAAAGTTAAGGAGTCaaagaggaaggtaagaaaagag--a--aaggatgag--------------aaagt---aaatatacaagaaaacgt---aaccagaggctc---aaaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178449060 122 + 185818997 TATATTACAC------------------------------------------------------------ATTGACTTTT-----------------------TAGAGAGGGTTGGCATAGaaagataaggagtcaaagaggaaggtaaggaaagag--a--aaggatgag--------------aaagt---aaatatacaagaAAATGT---AACCAGAGGCTC----aaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184938793 120 + 192294377 TATATTACAC------------------------------------------------------------ATTGACTTTT-----------------------TAGAGAGGGTTGGCATAGaaagataaggagtcaaagaggaaggtaaggaaagag--a--aaggatgag--------------aaagt---aaatatacaagaAAATGT---AACCAGAGGCTC------a i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7907402 124 + 15219753 TATATTACAC------------------------------------------------------------ATTGACTTTT-----------------------TAGAGAGGGTTGGCATAGAAAGATAGGGAGTCaaagaggaaggtaaggaaagag--a--aaggatgag--------------aaagt---aaaTATACAAGAAAATGT---AACCAGAGGCTC--aaaaa i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9551565 126 + 11639508 TATATTACAC------------------------------------------------------------ATTGACTTTT-----------------------TAGAGAGGGTTGGCATAGAAAGATAAGGAGTCAgagaggaaggtaaggaaagag--a--aaggatgag--------------aaagt---aaaTATACAAGAAAATGT---AACCAGAGGCTCaaaaaaa i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120403130 123 + 127223203 TATATTACAC------------------------------------------------------------ATTGACTTTT-----------------------TAGAGAGGGTTGGCATAGaaagataaggagtcaaagaggaaggtaaggaaagag--a--aaggatgag--------------aaagt---aaatatacaagaAAATGT---AACCACAGGCTC---aaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1529445 123 - 2854183 TATATTACAC------------------------------------------------------------ATTGACTTTT-----------------------TAGAGAGGGTTGGCATAGAAAGATAAGGAGTCaaagaggaaggtaaggaaagag--a--aaggatgag--------------aaagt---aaaTATACAAGAAAATGT---AACCAGAGGCTC---aaaa i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20236019 125 + 27496150 TATATTACAC------------------------------------------------------------ATTGACTTTA-----------------------TGGAGAGGGTTGGCATAGaaagataaggagtcaaagaggaaggtaaggaaagag--a--aaggatgag--------------aaagt---aaatatacaagaAAATGT---AACCAGAGGCTC-aaaaaa i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33686422 114 - 128169293 TATATTACAT------------------------------------------------------------ATTGACGTTT-----------------------TAGAAAGGGTTGGCATAG--------AGAGTCAAAGAGGAAGGTAAGAAAAGAG--AG-AAAGATGAG--------------AAAGT---AAATATA-AAGAAAACTTAACAACAAGAGAGTC------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17024678 121 + 19594188 TATATTACAT------------------------------------------------------------ATTGACTTTT-----------------------TAGAGAGGGTTGGCATAGA----TAAATAGTCAAATAGGGAGGTaag-aaagag--ag-aaagatgag--------------aaagt---aaatata-aaggaaactt---aataagagagtcaaaaaaa i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4912500 113 - 11686629 TATATTACAT------------------------------------------------------------ATTGACTTTT-----------------------TACAAAGGATTGGCATAGA----TAAACAGTCAAAGAGGAAGGTAAG--AAAAG--AG-AAAGATGAG--------------AAAGT---AAATATA-AAGAAAACTT---AATAAGAGAGTC------- i cebCap1.NW_016107335v1 I 311 C 0 s aotNan1.NW_018506100v1 3261522 111 - 4527795 TATATTACAT------------------------------------------------------------ATTGACTTTT-----------------------TAGAAAGAGTTGGCATAA--------AGAGTCAAAGAGGAAGGTAAGAAAAGAG--AG-AAAGATGAG--------------AAAGT---AAATATA-AAGAAAACTC---AACAAGAGAGTC------- i aotNan1.NW_018506100v1 I 310 C 0 s otoGar3.GL873572 5477982 117 - 12253515 TACATCACAT------------------------------------------------------------GTTAGCAATC-----------------------TGAAGAGGATTAACATAG------AAAGAGTCA-AGAGAAAGCTAAGAAAAGAA--AGCAAGAGTGAG--------------AAGGTAGGAAATCTACAAGAAAACCT---GACCAGAGGTAT------- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16049067 218 + 59632846 CATATTACAATAAACTTAAAACACCTACTTAAGGTTTTCAAATTAAGTTTTTTGCAATAATGTAACAGGAATTTGCTTTTATTAAAGAAGCAATATATATATATAAGAATGGTTGGCATAGAAAG-------GTCAAAGAGGAAGGTAAGAAAAGAGTAA--AAAGATGGGaaatataaaatattaaaga---aaatttaaatGAAAACTT---GCCCAGAAGTGTTTTTAAA i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1220413 4 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=10174854.000000 s hg38.chrUn_KI270746v1 48226 1000 + 66486 AAAAGA-----------------AAAGTAG-GAC--AG-------TAAAATAAACATTTTGA-CCTATTTATATGACTCATAAAATCAAAATAACTTGCT----ATGAGA---TTTTCATCATTAACTGACA---TTT---AGATTAGAGAAAATATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAAGAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGCCCCGACAGTCCTGCACCTCGAGGTCTCCACTTTCTTGGAAATCCAGACCCATGGCCCTATGTAACAGATTAGG-AAAAGTCAACATTCTG--TTACAGCCCAAAATAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATTAAAT-------------------------------------------------------------------------------------GTT-----ATACAAACACTTCTTTA-----------------GATAAGTATTAAAAGACCTGGCTTATTATTTTTATCTTTAAAAGTATACTCCACAACTTA-------AAAATCT------AAATATAAAATGCTTACAACCTTAGAATCATA--------------CTTTAGGCCTGTCACTGTGAACG----CTATC----AGCAAGCCTTTGCATGATTTTTCTCTTTCCCACTCCTACATTCTCGGTGATGACAACAACTGTAGCCTGATCCAGATATTTCGAAGTGCAACAAATCGTATTCAATATAGAGTAA---GGATAAGGAAAAACTCTCTCATTAACTGGTCTCGCAGTGATTACagtaatagctaacatctattgagtaatt-actatgtactaatctaagta-ttttttactctcatccatcccatatagtag-----gttttat--tatcctcatttg--agatgagtgtgctgaggaataaaatggttaagtaacttgtccaaggttacttagctagcaagcctggcTCCAGCGTCCCTGGGTTGGAAGCA-TA-TTCTGTACTGCTACATCA--GCATG-AAAGTTCATTTTTGCTAGTGTGTGACAGTATTCTTC--CTGTCATTAAAATTAAGTCAGTTTCCTTCACTATTCAACAGTTCTCT-TATGA-----ACTCAACATTTCTACCTCATTC-ACCATTGTATTTAGAGGAAAATTTATT s panTro5.chr2A 90606899 1008 + 111504155 aaaaaa------aaaaaaaaaGCAAAGTAG-GAC--AG-------TAAAATAAACATTTTGA-CCTATTTATATGACTTTTAAGTTCAAAATAACTTGCT----ATGAGA---TTTTCATCATTAACTGACA---TTT---AGATTGGAGAAAATATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCAACTCGCCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCATGGCCCTATGTAACAGATTAGG-AAAAGTCAACATTCTG--TGACAGCCCAAAATAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATTAAAT-------------------------------------------------------------------------------------GTT-----ATACAAACACTTCTTTA-----------------GATAAGTATTAAGAGACCTGGCTTATTATTTTTATCTTTAAAAGTATATTCCACAACTTA-------AAATTCT------A---ATAAAATGCTTACAACCTTAGAATCATA--------------CTTTCGGGCTGTCACTGTGAACG----CTATC----AGCAAGCCTTTGCAGGATTTTTCTCTTTGCCACTCCTACATTCTCGGTGACGACAACAACTATAGCCTTATCCAGATATTTCGAAGTGCAACAAATTGTATTCGATATAGAGTAA---GGATAAGGAAGAACTCTCTCATTAACTGGTCTCGCGGTGATTACagtaatagctaacatctattgagtattt-actatgtactaatctaagta-ttttttactctcaacaatcccatatagtag-----gttttat--tatcctcatttg--agatgagtgtgctgaggaataaaatggttaagtaacttgtccaaggtcgcttagctagcaagcctggcTCCAGCGTCCCTGGGTTGGAAGCA-TA-TTCTGTACTGCTACATCA--GCATG-AAAGTTCATTTTTGCTAGTGTGTAACAGTATTCTTC--CTGTCATTAAAATTAAGTCAGTTTCCTTCACTATTCAACAATTCTCT-TATGA-----ACTCAACATTTCTACCTCATTC-ACCATTGTATTTAGAGGAAAATTTTTT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155959451 1001 + 162613886 AAAAAG----------------CAAAGTAG-GAC--AG-------TAAAATAAACATTTTGA-CCTATTTATATGACTCTTAAGATGAAAATAACTTGCT----ATGAGA---TTTTCATCATTAACTGACA---TTT---AGATTAGAGAAAATATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGCCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG-AAAAGTCAACATTCTG--TGACAGCCCAAAATAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATTAAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACTTCCTTA-----------------GATAAGTATTAAGAGACCTGGCTTATTATTTTTATCTTTAAACATATACTCCACAACTTA-------AAAATCT------AAATATAAAATGCTTACAACCTTGGAATCATA--------------CCTTAGGCCTGTCACTGTGAATG----CTATC----AGCAAGCCTTTGCATGATTTTTCTCTTTCCCACTCCTACATTCTCGGTGACGACAACAACTATAGCCTGATCCAGATATTTCGAAGTGCAACAAATTGTATTCAATATAGAGTAA---GTATAAGGAAGAACTCTCTCATTAACTGGTCTCGCGGTGATTACaataatagctaacatctattgagtactt-actatgtactaatctaagta-ttttttactctcaacaatcccatatagtag-----gttttat--tatccccatttg--agatgagtgtgctgaggaataaaaaggttaagtaacttgtccaaggtcacttagctagcaagtCTGGCTGCAGCGTCCCTGGGTTGGAAGCA-TA-TTCTGTACTGCTACATCA--GCATG-AAAGTTCATTTTTGCTAGTGTGTAACAGTATTCTTC--CTCTCATTAAAATTAAGTCAGTTTCCTTCACTATTCAACAGTTCTCT-TATGG-----ACTCAACATTTCTACCTCATTC-ACCATTGTATTTAGAGGAAAATTTATT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102832521 1017 + 110113093 aaaaaaaaaaaaaaaaaaaaagcaaagTAG-GAC--AG-------TAAAATAAACATTTTGG-CCTACTTATATGACTCTTAAGATCAAAATAACTTGCT----ATGAGA---TTTTCATCATTAACTGACA---TTT---AAATTAGAGAAAATATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGCCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG-AAAAGTCAACATTCTG--TGACAGCCCAAAATAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATTAAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACTTCTTTA-----------------GATAAGTATTAAGAGACCTGGCTTATTATTTTTATCTTTAAAAGTATACTCCACAACTTA-------AAAATCT------AAATATAAAATGCTTACAACCTTAGAATCATA--------------TCTTAGGCCTCTTACTGTGAACG----CTATC----AGCAAGCCTTTGCATGATTTTTCTCTTTCCCACTCCTACATTCTTGGTGGCTACAACAACTATAGCCTGATCAAGAGAGTTCGAAGTGCAACAAATTGTATTCAATACAGAGTAA---GTATAAGAAAGAACTCTCTCATTAACTGGTCTCGCGGTGATTACagtaacagctaacatctattgagtactt-actatgtactaatctaagta-ttttttactctcaacaaccccatatagtag-----gttttat--tatccccatttg--agatgagtgtgctgaggaataaaaaggttaagtaacttgtccaaggtcacttagctagcaagtctggctccagcatccctgggttggaaccA-TA-TTCTGTACTGCTATATCA--GCATG-AAAATTCATTTTTGCTAGTGTGTAACAGTATTCTTC--TTGTCATTAAAGTTAAGTCAGTTTCCTTCACTATTCAGCAGTTCTCT-TATGA-----ACTCAACATTTCTACCTCATTC-ACCATTGTATTTAGAGGAAAATGTATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178449182 1008 + 185818997 aaaaaa---------aaaaaagcaaaatagagac--agaataaaataaaataaaCATTTTGG-CCTATTTATATGATTCTTAAGATCAAAATAACTTGCT----GTGAGA---TTTTCATC---AACTGACA---TTT---AGATTAGAGAAAATATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGTCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG-AAAAGTCAACATTCTG--TGACAGCCGAAAAGAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATCAAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACTTCTTTA-----------------GGTAAGTATTAAGAAACCTGGCTTATTATTTGTATCTTTAAAAGCATACTCCACAACTTA-------AAAATCT------AAATATAAAATGTTTACAACCTTAGAATCATA--------------CCTTGGGCCTGTCACTGTGAACG----CTTTC----AGCAAGCCTTTGCATGATTTTTCTCTTTCCCACTCCTACATTCTCGGTGGCTACAACAACTATAGCCTAATCCAGATATTTCGAAGTGCAACAAATTATATTTAATATAGAGTAC---GTATAAGGAAGAACTCTCTCATTAACTGGTCTTGCAGTGATTACagtaatagctagtatctattgagtactt-actatgtactaatctaagaa-ttttttactctcaacaattccatatagcag-----gttttat--tatccccatttt--agatgactttgctgaggagtaaaaaggttaagtaacttgtccaaagtcacttatctagcaagtctggctccagcgtccctgggttggaaccA-TA-TTCTGTACTGCTACATCA--GCATG-AAAGTTCATTTTTGCTAGTGTGTAACAGTATTCTTC--CTGTCATTAAAATTAAGTCAGTTTCCTTCACTATTCAACAGTTCTCT-TATGA-----ACTCAACATTTCTACCTCATTC-ACTATAGTACTTAGAGGAAAAT----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184938913 1008 + 192294377 aaaaaa---------aaaaaagcaaaatagagac--agaataaaataaaataaaCATTTTGG-CCTATTTATATGATTCTTAAGATCAAAATAACTTGCT----GTGAGA---TTTTCATC---AACTGACA---TTT---AGATTAGAGAAAATATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGTCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG-AAAAGTCAACATTCTG--TGACAGCCGAAAAGAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATCAAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACTTCTTTA-----------------GGTAAGTATTAAGAAACCTGGCTTATTATTTGTATCTTTAAAAGCATACTCCACAACTTA-------AAAATCT------AAATATAAAATGTTTACAACCTTAGAATCATA--------------CCTTGGGCCTGTCACTGTGAACG----CTTTC----AGCAAGCCTTTGCATGATTTTTCTCTTTCCCACTCCTACATTCTCGGTGGCTACAACAACTATAGCCTAATCCAGATATTTCGAAGTGCAACAAATTATATTTAATATAGAGTAC---GTATAAGGAAGAACTCTCTCATTAACTGGTCTTGCAGTGATTACagtaatagctagtatctattgagtactt-actatgtactaatctaagaa-ttttttactctcaacaatcccatatagcag-----gttttat--tatccccatttt--agatgactttgctgaggagtaaaaaggttaagtaacttgtccaaagtcacttatctagcaagtctggctccagcgtccctgggttggaaccA-TA-TTCTGTACTGCTACATCA--GCATG-AAAGCTCATTTTTGCTAGTGTGTAACAGTATTCTTC--CTGTCATTAAAATTAAGTCAGTTTCCTTCACTATTCAACAGTTCTCT-TATGA-----ACTCAACATTTCTACCTCATTC-ACCATAGTACTTAGAGGAAAAT----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7907526 1008 + 15219753 aaaaaa---------aaaaaagcaaaatagagac--agaataaaataaaataaaCATTTTGG-CCTATTTATATGATTCTTAAGATCAAAATAACTTGCT----GTGAGA---TTTTCATC---AACTGACA---TTT---AGATTAGAGAAAATATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGTCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG-AAAAGTCAACATTCTG--TGACAGCCGAAAAGAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATCAAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACTTCTTTA-----------------GGTAAGTATTAAGAAACCTGGCTTATTATTTGTATCTTTAAAAGCATACTCCACAACTTA-------AAAATCT------AAATATAAAATGTTTACAACCTTAGAATCATA--------------CCTTGGGCCTGTCACTGTGAACG----CTTTC----AGCAAGCCTTTGCATGATTTTTCTCTTTCCCACTCCTACATTCTCGGTGGCTACAACAACTATAGCCTAATCCAGATATTTTGAAGTGCAACAAATTATATTTAATATAGAGTAC---GTATAAGGAAGAACTCTCTCATTAACTGGTCTTGCAGTGATTACagtaatagctagtatctattgagtactt-actatgtactaatctaagaa-ttttttactctcaacaatcccatatagcag-----gttttat--tatccccatttt--agatgactttgctgaggagtaaaaaggttaagtaacttgtccaaagtcacttatctagcaagtctggctccagcgtccctgggttggaaccA-TA-TTCTGTACTGCTACATCA--GCATG-AAAGTTCATTTTTGCTAGTGTGTAACAGTATTCTTC--CTGTCATTAAAATTAAGTCAGTTTCCTTCACTATTCAACAGTTCTCT-TATGA-----ACTCAACATTTCTACCTCATTC-ACCATAGTACTTAGAGAAAAAT----- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9551691 1008 + 11639508 aaaaaa---------aaaaaagcaaaatagagac--agaataaaataaaataaaCATTTTGG-CCTATTTATATGATTCTTAAGATCAAAATAACTTGCT----GTGAGA---TTTTCATC---AACTGACA---TTT---AGATTAGAGAAAATATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGCCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG-AAAAGTCAACATTCTG--TGACAGCCAAAAAGAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATCAAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACTTCTTTA-----------------GGTAAGTATTAAGAAACCTGGCTTATTATTTGTATCTTTAAAAGCATACTCCACAACTTA-------AAAATCT------AAATATAAAATGTTTACAACCTTAGAATCATA--------------CCTTGGGCCTGTCACTGTGAACG----CTTTC----AGCAAGCCTTTGCATGATTTTTCTCTTTCCCACTCCTACATTCTCGGTGGCTACAACAACTATAGCCTAATCCAGATATTTCGAAGTGCAACAAATTATATTTAATATAGAGTAC---GTATAAGGAAGAACTCTCTCATTAACTGGTCTTGCAGTGATTACagtaatagctagtatctattgagtactt-actatgtactaatctaagta-ttttttactctcgacaatcccatatagcag-----gttttat--tatccccatttt--agatgactttgctgaggagtaaaaaggttaagtaacttgtccaaagtcacttatctagcaagtctggctccagagtccctgggttggaaccA-TA-TTCTGTACTGCTACATCA--GCATG-AAAGTTCATTTTTGCTAGTGTGTAACAGTATTCTTC--CTGTCATTAAAATTAAGTCAGTTTCCTTCACTATTCAACAGTTCTCT-TATGA-----ACTCAACATTTCTACCTCATTC-ACCATAGTACTTAGAGGAAAAT----- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120403253 1008 + 127223203 aaaaaa---------aaaaaagcaaaaTAGAGAC--AGAGTAAAAT-----AAACATTTTGG-CATATTTATATGATTCTTAAGATCAAAATAACTTGCT----GTGAGA---TTTTCATC---AACTGACA---TTT---AGATTAGAGAAAATATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGCCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG-AAAAGTCAACATTCTG--TGACAGCCGAAAAAAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATTAAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACTTCTTTA-----------------GGTAAGTATTAAGAAACTTGGCTTATTATTTGTATCTTTAAAAGCATACTCCACAACTTA-------AAAATCT------AAATATAAAATGTTTACAACCTTAGAATCATA--------------CCTTGGGCCTGTCACTGTGAACG----CTTTC----AGCAAGCCTTTGCATGATTTTTCTCTTTCCCACTCCTACATTCACGATGGCTACAACAACTATAGCCTAATCCAGATATTTCGAAGTGCAACAAATTGTATTTAATATAGAGTAC---GTATAAGGAAGAACTCTCTCATTAACTGGTCTTGCAGTGATTACagtaatagctagtatctattgagtactt-actatgtactaatctaagta-ttttttactctcgacaatcccatatagtag-----gttttat--tatccccatttt--agatgactttgctgaggaataaaaaggttaagtaacttgtccaaggtcacttatctagcaagtctggctccagcgtccctgggttggaaccA-TA-TTCTGTACTGCTACATCA--GCATG-AAAGTTCATTTTTGCTAGTGTGTAACAGTATTCTTC--CTGTCATTAAAATTAAGTCAGTTTCCTTCACTATTCAACAGTTCTCT-TATGAAAGGGACTCAACATTTCTACCTCATTC-ACCATAGTACTTAGAGGAAAAT----- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1529568 1008 - 2854183 aaaaaa---------aaaaaagcaaaatagagac--agaataaaataaaagaaaCATTTTGG-CCTATTTATATGATTCTTAAGATCAAAATAACTTGCT----GTGAGA---TTTTCATC---AACTGACA---TTT---AGATTAGAGAAAATATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGCCCCGACAGTCCTGCACCTCGAGGTCTCCGTTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG-AAAAGTCAACATTCTG--TGACAGCCGAAAAGAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATCAAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACTTCTTTA-----------------GGTAAGTATTAAGAAACCTGGCTTATTATTTGTATCTTTAAAAGCATACTCCACAACTTA-------AAAATGT------AAATATAAAATGTTTACAACCTTAGAATCATA--------------CCTTGGGCCTGTCACTGTGAACG----CTTTC----AGCAAGCCTTTGCATGATTTTTCTCTTTCCCACTCCTACATTCTCAGTGGCTACAACAACTATAGCCTAATCCAGATATTTCGAAGTGCAACAAATTATATTTAATATAGAGTAC---GTATAAGGAAGAACTCTCTCATTAACTGGTCTTGCAGTGATTACagtaatagctagtatctattgagtactt-actatgtactaatctaagta-ttttttactctcgacaatcccatatagcag-----gttttat--tatccccatttt--agatgactttgctgaggagtaaaaaggttaagtaacttgtccaaagtcacttatctagcaagcctggctccagtgtccctgggttggaaccA-TA-TTCTGTACTGCTACATCA--GCATG-AAAGTTCATTTTTGCTAGTGTGTAACAGTATTCTTC--CTGTCATTAAAATTAAGTCAGTTTCCTTCACTATTCAACAGTTCTCT-TATGA-----ACTCAACATTTCTACCTCATTC-ACCATAGTACTTAGAGGAAAAA----- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20236144 991 + 27496150 aaaaaa---------aaaaaagcaaagtagagac--agagtaaaataaaataaaCATTTTGG-CCTATTTATATGATTCTTAAGATCAAAATAACTTGCT----GTGAGA---TTTTCATC---AATTGACA---TAT---AGATTAGAGAAAATATACATAAAGCAA-----------GCCTCACCCCAGGTAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGCCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG-AAAAGTCAACATTCTG--TGACAGTCGAAAAGAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATTAAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACTTTTTTA-----------------GGTAAG--------------------TATTTGTATCTTTAAAAGCATACTCCACAACTTA-------AAAATCT------AAATATAAAATGTTTACAACCTTAGAATCATA--------------CCTTGGGCCTGTCACTGTGAACG----CTTTC----AGCAAGCCTTTGCATGATTTTTCTCTTTCCCACTCCTACATTCTCGGTGGCTAAAACAACTACAGCCTAATCCAGATATTTTGAAGTGCAACAAATTGTATTTA--ATAGAGTACAGAGTATAAGGAAGAACTCTCTTATTAACTGGTCTTGCAGTGATTACagtaatagctagtatctattgagtactt-actatgtactaatttaagta-ttttttactctcaacaatcccatatagtag-----gttttat--tatccccatttt--agatgactttgctgaggaataaaaaggttaagtaacttgtctaaggtcacttatctagcaagtctggctccagcgtccctgggttggaaccA-TA-TTCTGTACTGCTACATCA--GCATG-AAAGTTCATTTTTGCTAGTGTGTAACAGTATTCTTC--CTGTCATTAAAATTAAGTCAGTTTCCTTCACTATTCAACAGTTCTCT-TATGA-----ACTCAACATTTCTACCTCATTC-ACCATAGTACTTAGAAGAAAAT---TT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33686536 1004 - 128169293 ----CA---------AAAAAAGAAAAGTAGAGACAGAG-------TAAAATAAACGTTCTGG-CCTATTTATATGACTCTTAATATCACAATAACTTGCTACAAGTGAGAT--TTTTCATCATTAATTGACA---TTT---AGATGAGAGAAAAGATATATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGCCCCGACAGTCCCGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG--AAAGTCAACATTTTG--TGACAGCCCAAAGGAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATTTAAT-------------------------------------------------------------------------------------GTT-----ACGCAAACACTTTC----------------------TAAGTATTACAAAACCTGGC---TTATTTGTATCTTTAAAACATTACTCCA-CACTTA-------AAAATCT------AAATACAAAAGGCTTACAACCTTAGAATTATA--------------CCGTGGGCCTGTCACTGTGAACA----CTATC----AGGAAGGCTTTGCATGATTTTACTGTTTCCCACTCCTACATTCTAAGTGGCTACAACAGCTACAATGTGAACCAGACATTTCGAAGTGCAACAAATTGTATTCAATACAAA-------GTATAAGGAAGAACTCTCTCATTAACTGGTCTCACAGTGATTATagtaatagctaacatctattgagtactt-actatgtactaatctaagta-ttttttactcttaacaaccccacatagtggttactgttttat--tatccctatttt--agatgagtgtgctaaagaataaaaagattaagtaacttgtccaaggtaacatagctagcaaatCTGACTCCAGTGTCCCTGGTTTGGAACCA-TA-TTCTGTATTACTACATCG--GCATGAAAAGTTCATTTTTGCTAGTGTATAACAGTGTTCTTC--GTGTCATTAAAATTAAGTCCGTTGCCTTCACTATTCAACAGTTCTCT-TATGA-----ACTCAACATTTCTGCCTCATTC-ACCATAGTATTTAGAGGAAAATTCATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17024799 1002 + 19594188 aaaaaa---------aaaaaaggaaAGTAGAGGC--AG-------TAAAATAAACATTTTGGCCCTATTTGTATGACTCTTAGTATCGAAATAACTTGCTACAAGTGAGAT--TTTTCATCATTAATTGACA---TTT---AGATTAGAAAAAAGATACATAAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGCCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG--AAAGTCAACATTTTG--TGACAGCCCAAAGGAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATTTAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACTTTC----------------------TATATATTACGAAACCTGGCTTATTATTTGTATATTTAAAAGATTAC-----AACTTA-------AAAATCT------AAATATAAAAGGATTACAACCTTAGAATTATA--------------CCTTGGGCCTGTCACTGTGAGCA----CTATC----AGGAAGGCTTTGCATGATTTTACTGTTTCCCACTCCTACATTCTAAGTGGCTACAATAGCTACAACCTGATCCAGATATTTCCAAGTTCAACAAATTGTATTTAATATAAA-------GTATAAGGAAGAACTCTCTTATTAACTGGTCTCACAGTGATTATAGCaatagctaacatctattgagtactt-actatgtactaatctaagtatttttttactctcaacaaccacatatagtagttactgttttat--tatccccatttt--agatgagtgtgctaaagaataaaaagattaagcaacttgtccaaggtaacacagctagcaaatctggctccagtatccctggtttggaacca-ta-ttctgtactGCTATATCG--GCATG-AAAGTTCA-TTTTGCTAGTGTATAACAGTA-TATTC--CTGTCATTAAAATT--GTCAGTTTCTTTCACTACTCAACAGTTCTCT-TATGA-----ACTCAACATTTCTACCTCATTC-ACCACAGTATTTAGAGGAAAATTTATT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4912613 1002 - 11686629 -CAAAA---------AAAAAAGGAAAGTAGAGAC--AG-------TAAAATAAACATTTTGG-CCTATTTGTATGACTCTTAACATCGAAATACCTTG-TACAAGTGAGAT--TTTTCATCATTAATTGACA---TTT--------AGAGAAAAGATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGTTTTGACCTGCCTCGGCCACCTCGCCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG--AAAGTCAACCTTTTG--TGACAGCCCAAAGAAATTTTTAAATCCGAATGCCACTGAGATAAA-ACATTTTATTTAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACATTC----------------------TAAGTATTACAAAGCCTGGCTTATTATTTGCACCTTTAAAAGATTACTCCACAACTTA-------AAAATCT------AAATATAAAAGGCTTACAACCTTAGAATTATA--------------CCTTGGGCCTGTCACTGTGAACA----CTATC----AGGAAGGCTTTGCATGACTTTACTGTTTACCATTCCTACATTCTAAGTGGCTACAACAGCTACAACATGATTCAGATATTTCCAAGTGCAACAAATTGTATTCAATACAAA-------GTATAAGGAAGAGCTCTCTCATTAACTGGTCTCACAGTGATTATAGtaatagctaacatctactgaatactc-actatgtactaatctaagta-ttttttactctcaacaaccccatatagcagttactgttttat--tatccccatttt--aaatgagtgtgctaaagaataaaaagattaagtaacttgtccgaggtaacacagctagcaaatctggttccagcgtccctggtttggaaccc-ta-ttctgtactgCTATATCG--GCATG-AAAGTTCATTTTTGCTAGTGTATTACAGTATTCTTC--CTGTCATTAAAATTAAGTCAGTTTCCTTCACTATTCAACAGTTCTCT-TATGA-----ACTCAACATTTCTACCTCATTC-ATCATAGTATTTCGAGGAAAATTTATT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3261633 1008 - 4527795 --AAAA---------AAAAAAGGAAAGTAGAGACAGAG-------TAAAATAAACATTTTGG-CCTATTT-TGTGACTCTTAATATCGAAATAACTTGCTACATGTGAGAT--TTTTCATCATTAATTGACA---TGT---AGATTAGAGAAAAGATACATGAAGCAA-----------GCCTCACCCCAGGCAATACAACAGCTCCGATTCCACTTTTCAGCTTTGACCTGCCTCGGCCACCTCGCCCCGACAGTCCTGCACCTCGAGGTCTCCGCTTTCCTGGAAATCCAGACCCACGGCCCTATGTAACAGATTAGG--AAAGTCAACATTTTG--TGACAGCCCAAAGGAATTTTTAAATCCAAATGCCACTGAGATAAA-ACATTTTATTTAAT-------------------------------------------------------------------------------------GTT-----ACACAAACACTTTC----------------------TAAGTATTATAAAACCTGACTTATTATTTGTATCTTTAAAAGATTACTCCACAACTTA-------AAAATCT------AAATATAAAAGGCTTAAAACCTTAGAATTATA--------------CCATGGGCCTGTCATTGTGAACA----CTATC----AGGAAGGCTTTGCATGATTTTACTGTTTCCCACTCCTACATTCTAAGTAGCTACAACAGCTACAACCTGATCCAGATATTCCGAAGTGCAACACATTGTATTCAACACAAA-------GTATGAAGAAGAACTCTCTCATTAACTGGTCTCACAGTGATTATagtaatagttaacatctactgagtactt-attatgtgctaatcaaagta-ttttttactctcaacaaccccatatagtagttactgttttat--tatccccatttt--agatgagtgtgctaaagaataaaaagattaagtaacgtgtccaaggtaacatagctagcaaatCTGGTTCCAGCGTCCCTGGTTTGGAACTA-TA-TTCTGTACTGCTACATTG--GCATG-AAAGTTCATTTTTGCTAGTGTCTAACAGTATTCTTC--CTGTCTTTAAAATTAAGTCAGTTTCCTTCACTATTCAACAGTTCTCT-TATGA-----ACTCAACATTTCTACGTCATTC-ACCATGGTATTTAGAGGAAAATTTATT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5478099 1006 - 12253515 TTAAAA---------ACAAACACAAAGTAGAGATATAG-------TAAAATAAAAATTTTAG-CCTATCTGTATGATTCTTATGATCTAAA---CTTGCT----ACGCAAGCAATTACTCCATTCATTGACA---TTT-AAAGATTACAGCAGATATAAATGAAATGA-----------GCCTCACCCCAGGCAATACAACAGCTCCAATTCCACTTTTTAGTTTTGACCTGCCTCTGCCTCCTCGTCCTGACAGTCCTGCACCACGAGGTCTCCTCTTTCCTGGAAAGCCAGATCCCCGGCCCTATATAACAGATAAGA-GAAAATCAACGTTCTG--TAACAGCCCAAAAGGATTTTTAAATTTAAAAGTCAGTGAGATAAAGACATGTTCTTAAAT-------------------------------------------------------------------------------------GTT-----ACACAAATACTCGCTTCTTTTATTCTGATTAGATGATAAATGTTAAGAGACCAGGCTTATTATTTGTATCTTTACATATATATTCCACAACTTT-------AAAA-------------ATAGAATGCTTATAGTCTTAGAATCAAA--------------CTTTAGGTCTATCATTGTGAG---------------GATAAGTC----CATTATTTTTCTATTTCAGAATCCTACATTCTAGGTGACTAGAACAGCTACATCCCAATCCAGGTATTTTGACATGGGACCAATTGGATTCAACATAAA-------GAACAAGGAAAA-----CTCCCTAAATGGTCT--AAGTAATTATagtaatagttaacatctattaaatacttaactatgtactgatctaagcacttttttactctt---aatcccatatggtaggcactattttattatatacccatttt--agataggtgtcctaaggaataaagag-----gtaacttgttcaaggtcattaagctaccaagtctggctccagagtccttagtttgtagccacta-ttctgtactgCTACATT---GCATG-AAAGTTTATTTTTGCTCATGTATAAAAATGTTCTTCCTCTGTTATTAAAATTAAGTCCATTTCCTTTAGTATTCAATAGCTGTCT-CATGA-----ATTGAACATGTCTACTTTATTCAACCATAGTATTTAGAGAAAAAAATCAT i otoGar3.GL873572 C 0 I 198 s canFam3.chr16 16049285 1018 + 59632846 AAGGGG---------GGGGGGGGGGAATGGAGAT--AAGG-----TAAAATAAAAATTTTGG-CTTATTTACGTGACTCTTACAATCTAGTAATTTTACAA---ATGAGA---TTATCATCATCACTCAATAAATTAT---GGATTATA-ATAGCAAAGATAAAGCAAATGAGACATGTGTCTTACCCCAGGTAACACAACTGCTCCAATTCCACTTTTCAATTTTGACCTGCCTCTGCCACCTCGTCCTGACAACCCCGCACCACGGGGTCTTCGCTTTCCTGGAAATCCTGACCCACGGCCCTACATAACAGAGAAGGGAAAAATCAGCATTCTG--CAAAAATCCAAAGGAATATTAAAATCCAACG-----TGAGCTAAA-ACATTTTATTAAAG-------------------------------------------------------------------------------------GTTATAACACACAAATACTTGCTTTTCTTACTCTGATTAGAGGTTAAATATTAAGAGACCAGGCTTATTATTTTTATCTTTCAACATGTATTATGCAACTTA-------AAAGTAT------AGACATAAAATGCCTATGATCTTAGAATCAAA--------------TGTTGGGACTCATATTGTGAATGTTCTCTATC----AGTAAACCTTGGCCTTATTTTTTCACTTCCTAATCCTACATTCTAAGTAGCT-CAACAGACACAATCCCAAC-------------------CAATTTGTATGCAATACAGAGCAA---GCGTAAGGAAAGACTCTCTTGCTAACTGTTCT--CTGTAATTGTAGCaatagctgacatatattgagtactt--ctatacaccactctaagca-ccttttactcacaactcacaaggccagtag----tattttat--tatccccattttagagataaatgcgccgagggataaaat------gtaacttgtccaaagtc-tagagctagcaactgtagctccagtatccacattctcaaccag-ta-ttctgcactgCTACTACACTGCATG-AAAGCTAAATTTTGCTAGTGTATAACAATATTTTTC--CTGTCATTAAAATT--GTCAGTTTCCTTTACTATTCAATAGCTGT----ATGA-----ACTGAACAGATGTACCTCACTCTATCACAGTACTTAAAGGATAATGTATT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1220417 1074 + 1922530 -----------------------AAAGGAGAAGT--AGAGTAAAACAAAATAAAAACTTTAG-CCTAGGTATGTGATTCTTATGGTCTAAATAATTTGCTACAAATGAAA---TTATCATT---AATTAACA---TGTTAAAGATAAGAACAAACATAAATGAAGCAA-----------ACCTCACCCCAGGTAATACAACTGCTCCAATGCCACTTTTTAGTTTTGATCTGCCTCTGCCACCTCGTCCTGATAGTCCTGCACCACGGGGTCTCCGCTTTCCTGGAAATCCTGACCCACGCCCCTATACGACATGTAAGTAAAAAGTAAACTTTTTTTCTTAAAGCCCCAAAATTTTTTCAAGTCCAAATG----TGATATAAA-ACAT-TTATTAAATTTAGAGTGCATCTACTTTGTTACCCCATGAAAACAAAGAATCAAACCCCGAGAACTTATGCTTAAATAGTAACTTTAGGAAAACAGTT-----ACACAATTACTTGATTCTTTTATTCAACTCAGATGGTAAATATTAACAGATCATGCTTATTATAGGTAAAATCATAAAAATATGGAGAGGCTGAGTCAAAGAAAATTTTTCTTAGCCTGTAAACTGCCTATAACATTAGGATCTTAGAAACTAAAGGCTTCTAAGGGTCTGTCACTGTGAGTG----CTCTCCTTTAGCACACCTTGGCATTATTCGTCAGTTTCCTAATCCTACACTGTAGATCATGAGAATAGTAACAATCCGATCCAGATATCTCAAGGTAGATTAAACTGCATTCAATATA---------GCATAAGGACGGACTCTCTTACTTACTGGTCTCTCGGTAATTATagtaataactaacatttaatgagttctt-attacttactgattcaagta-tattttactcctaacagttttataataaaaatgctattttat--tgtccccattttagagataagtatgctcaagaataaa--------------------------------------------CTCCAGTGTTGATGTTTT-TAACCA-CATTTCTGTACTGCTACACT---GCAGT-AAAGTTCATTTTTGCTAGCGCAGAA-------------CT---------ATTAAGTCAATTTCCTTTAC-ATTCAACAGCTGTCTATATGA-----ACTGAATATGTGTACCTCATTCTGCCATAGAATTTAGAGGAAAATATATA i dasNov3.JH575209 I 4 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=1476464.000000 s hg38.chrUn_KI270746v1 49226 181 + 66486 ATTATTGTTATTACttttatttttgagacaagaacttgatctgtcactcaggttggactgcagtggtgtgatcacagctcactgcagcctagaactcttgggctcaagtgatcctc--ctgcttctgcctcccaaagtgccaggattatgggagtaagccaaagcatccagcCAGGAAAAATT s panTro5.chr2A 90607907 176 + 111504155 ATTATTGTTATTACttttatttttgagacaagaacttgatccatcactcaggttggagtgca-----gtgatcacagctcactgcagcctagaactcttgggctcaagtgatcctc--ctgcttctacctcccaaagtgccaggattacaggagtaagccaaagcgtccagcCAGGAAAAATT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155960452 181 + 162613886 ATTATTGTTATTACttttatttttgagacaagaacttgctccgtcactcaggttggagtgcagtggtgtgatcacagctcactgcagcctggaactcttgggttcaagtgatcctc--ctgcttctgcctcccaaagtgccaggattacaggagtaagccaaagcgtccagcCAGGAAAAATT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102833538 181 + 110113093 ATTATTGTTATTACttttatttttgagacaagaacttgctctgtcactcaggttggagtgcagtggtgtgatcacagctcactgcagcctagaactcttgggctcaagtgatcctc--ctgcttctgcctcccaaagtgccaggattacaggagtaaaccaaagcatccagcCAGGAAAAACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450190 180 + 185818997 -TTATTATTATTACttttatttttgagacaagaacttgttctgtcattcaggctggagtgcagtggtgtgatcacagctcactgcagcccagaacttttggactcaagtgatcctc--ctgcttctgcctcccaaagtgctgggattacaggagtaagcctaagcgtctagcCAGGAAAAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184939921 180 + 192294377 -TTATTATTATTACCtttatttttgagacaagaacttgttctgtcattcaggctggagtgcagtggtgtgatcacagctcactgcagcccagaacttttggactcaagtgatcctc--ctgcttctgcctcccaaagtgctgggattacaggagtaagcctaagcgtctagcCAGGAAAAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7908534 180 + 15219753 -TTATTATTATTACttttatttttgagacaagaacttgttctgtcattcaggctggagtgcagtggtgtgatcacagctcactgcagcccagaacttttggactcaagtgatcctc--ctgcttctgcctcccaaagtgctgggattacaggagtaagcctaagcgtctagcCAGGAAAAAAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9552699 180 + 11639508 -TTATTATTACTACttttatttttgagacaagaacttgttctgtcattcaggctggagtgcagtagtgtgatcacagctcactgcagcccagaactcttggactcaagtgatcctc--ctgcttctgcctcccaaagtgctgggattacaggagtaagcctcagcatccagcCAGGAAAAAAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120404261 180 + 127223203 -TTATTATTATTACttttatttttgagacaagaacttgttctgtcattcaggctggagtgcagtggtgtgatcacagctcactgcagcccagaactcttgggctcaagtgatcctc--ctgcttctgcctcccaaagtgctgggattacaggagtaagcctaagtgtccagcCAGGAAAAAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1530576 180 - 2854183 -TTATTATTATTACttttatttttgagacaagaacttgttctgtcattcaggctggagtgcagtagtgtgatcacagctcactgcagcccagaactcttggactcaagtgatcctc--ctgcttctgcctcccaaagtgctgggattacaggagtaagcctaagcgtccagcCAGGAAAAAAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237135 181 + 27496150 ATTATTATTATTACttttatttttgagacaagaacttgttctgtcattcaggctggagtgcagtggtgtgatcacagctcactgcagcccagaactcttgggctcaagtgatcctc--ctgcttctgcctcccaaagtgctgggattacaggagtaagccaaagagtccagcCAGGAAAAAAT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33687540 178 - 128169293 A---TTGTTATTAtttttaattttgagacaggaac-tgctctgtcattcaggctggagtgcaatggtgtagtgatggctcgctgcagcccacagctcctgggctgaagtgatcctcctctgcttctgcctcccaaagtgctgggatgacaggagtaagccCAAGTGTCCATCCA-GAAAAATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17025801 179 + 19594188 ATTGTTGTTATTAtttttaattttgagacaggaacttgctctgtcattcaggctggagtgcaatggtgcggtgatggctcactgcagcccacaactcctgggctg-agtgatcctc--ctgcttctgcctcccaaagtgctgggattacaggagtaagccaAGGTGCCTATCCA-GAAAAACT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4913615 180 - 11686629 ATTGTTGTTATTAtttttaattttgagacacaaacttgctccgtcattcaggctggagtgcaatggtgcagtgatggctcactgcagcccacaactcctgggctgaagtgatcctc--ctgcttctgcctcccaaagtgctgggattacaggagtaagccaaagtgtccATCCA-GAAAAATT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3262641 180 - 4527795 ATTGTTGTTATTAtttttaattttgagacaggaacttgctctgtcattcaggctggagtgcaatgatgaggtgatggctcactgcagcccacaactcctgggctgaagtgatcctc--ctgcttctgcctcccaaagtgctgggagtacaggagtaagccaAACTGTCCATCCA-GAAAAATT i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1221491 0 + 1922530 C e canFam3.chr16 16050303 0 + 59632846 C e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5479105 198 - 12253515 I a score=30930.000000 s hg38.chrUn_KI270746v1 49407 3 + 66486 ATT s panTro5.chr2A 90608083 3 + 111504155 ATT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155960633 3 + 162613886 ATT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102833719 3 + 110113093 ATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450370 3 + 185818997 ATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940101 3 + 192294377 ATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7908714 3 + 15219753 ATT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9552879 3 + 11639508 ATT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120404441 3 + 127223203 ATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1530756 3 - 2854183 ATT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237316 3 + 27496150 ATT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33687718 3 - 128169293 ATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17025980 3 + 19594188 GTT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4913795 3 - 11686629 ATT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3262821 3 - 4527795 ATT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5479303 3 - 12253515 ATT i otoGar3.GL873572 I 198 C 0 e dasNov3.JH575209 1221491 0 + 1922530 C e canFam3.chr16 16050303 0 + 59632846 C e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=1415524.000000 s hg38.chrUn_KI270746v1 49410 145 + 66486 TGAGGATTACAGGAAAGCTGACAAAAGGCTTTGTGAAAGCTTTGC------TTTAAATAATCTGAATAATAAATACTTGAAATGGAAATAATTTATCTGAC-TTCTT-----ACAC-AAGAAATAAACCTA-----TGGGAAAATGT----GTTAAATTCCC-TGATA s panTro5.chr2A 90608086 145 + 111504155 TGAGGATTACAGGAAAGCTGACAAAAGGCTTTGTGAAAGCTTTGC------TTTAAATAATCTGAATAATAAATACTTGAAATGGAAATAATTTATCTGAC-TTCTT-----ACAC-AAGAAATAAACCTA-----TGGGAAAATGT----GTTAAATTCCC-TGATA i panTro5.chr2A C 0 C 0 s panPan2.chr7 155960636 144 + 162613886 TGAGGATTATAGG-AAGCTGACAAAAGGCTTTGTGAAAGCTTTGC------TTTAAATAATCTGAATAATAAATACTTGAAATGGAAATAATTTATCTGAC-TTCTT-----ACAC-AAGAAATAAACCTA-----TGGGAAAATGT----GTTAAATTCCC-TGATA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102833722 145 + 110113093 TGAGGATTATCGGAAAGCTGACAAAAGGCTTTGTGAAAGCTTTGC------TTTAAATAATCTGAATAATAAATACTTGAAATGGAAATAATTTATCTGAC-TTCTT-----AGAC-AAGAAATAAACCTA-----TGGGAAAATGT----GTTAAATTCCC-TGATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450373 149 + 185818997 TGAGGATTATGGGAAAGCTGGCAAAAGGCTTTGTGAAAGCTTTGC------TTTAAATAATCTGAATAATAAATACTTGAAATGGAAATAATTTATCTGAC-TTCTT-----ACAC-AAAAAATAAACGTA-----TGGGAAAATGTGTTAGTTAAATCCCC-TGATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940104 146 + 192294377 TGAGGATTATGGGAAAGCTGGCAAAAGGCTTTGTGAAAGCTTTGC------TTTAAATAATCTG---AATAAATACTTGAAATGGAAATAATTTATCTGAC-TTCTT-----ACAC-AAAAAATAAACGTA-----TGGGAAAATGTGTTAGTTAAATTCCC-TGATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7908717 149 + 15219753 TGAGGATTATGGGAAAGCTGGCAAAAGGCTTTGTGAAAGCTTTGC------TTTAAATAATCTGAATAATAAATACTTGAAATGGAAATAATTTATCTGAC-TTCTT-----ACAC-AAAAAATAAACGTA-----TGGGAAAATGTGTTAGTTAAATTCCC-TGATA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9552882 149 + 11639508 TGAGGATTATGGGAAAGCTGGCAAAAGGCTTTGTGAAAGCTTTGC------TTTAAATAATCTGAATAATAAATACTTGAAATGGACACAATTTATCTGAC-TTCTT-----ACAC-AAAAAATAAACGTA-----TGGGAAAATGTGTTAGTTAAATTCCC-TGATA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120404444 150 + 127223203 TGAGGATCATGGGAAAGCTGACAAAAGGCTTTGTGAAAGCTTTGC------TTTAAATAATCTGAATAATAAATACTTGAAATGGAAATAATTTATCTGAC-TTCTT-----ACACAAAAAAATAAACGTA-----TGGGAAAATGTGTTAGTTAAATTCCC-TGATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1530759 149 - 2854183 TGAGGATTATGGGAAAGCTGGCAAAAGGCTTTGTGAAAGCTTTGC------TTTAAATAATCTGAATAATAAATACTTGAAATGGAAACAATTTATCTGAC-TTCTT-----ACAC-AAAAAATAAACGTA-----TGGGAAAATGTGTTAGTTAAATTCCC-TGATA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237319 149 + 27496150 TGAGGATTATGGGAAAGCTAGCAAAAGGCTTTGTGAAAGCTTTGC------TTTAAATAATCTGAATAATAAATACTTGAAATGGAAATAATTTATCTGAC-TTCTT-----ACAC-AAAAAATAAATGTA-----TGGGAAAATGTGTTAGTTAAATTCCC-TGATA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33687721 150 - 128169293 CGAGAATTATAGGAAAGCTGAAAAAAGGTTTTGTGAAAGCTTTGT------TTTAAATAATCTGAATAATAAATACCTGAAATGGAAATTATTTATCTGAC-TTCTTACCCAACAC-AAGAAATAAACCTA-----TGGGAAAACAC----GTTAAATTCTC-TGATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17025983 152 + 19594188 TGAGAATTATAGGAAAGCTAACAAAAGGTTTTGTGAAAGTTTTGT------TTTAAATAATCTTAATACTAAATACCTGAAATGGAAATTGTTTATCTGAC-TTCTTACCCAACAC-AAGAAATAAACCTA-----TGGGAAAACACAT--GTTAAATTCTC-TGATA i saiBol1.JH378140 C 0 I 199 s cebCap1.NW_016107335v1 4913798 150 - 11686629 TGAGAATTATAGGAAAGCTGACAAAAGGTTTTGTGAAAGCTTTGT------TTTAAATAACCTGAATAATAAATACCTGAAATGGAAATTATTTATCTGAC-TTCTTACCCCACAC-AAGAAATAAAGCTA-----TAGGAAAACAT----GTTAAATTCTC-TGATA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3262824 150 - 4527795 TGAGAATTATAGGAAAGCTAACAAAAGGTTTTGTGAAAGCTTTGT------TTTAAATAATCTGAATAATAAACACCTGAAATGAAAATTATTTATCTGAC-TTCTTACCCAACAC-AAGAAATAAACCTA-----TCGGAAAACAT----GTCACATTCTC-TGATA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5479306 146 - 12253515 TAAAGAGTGTAAGAAAGCTGACAAAAGG----GTAATAGCCTTGCTTTAAATTTAAATCATCTAAATAATAAATACTTGGAATGGAAA---TTTATCTGATGTTTTT-----ACCC-AGGAAAAAGTCCTA-----TGGGAAAACAC----GTTAAATTCTCTTGATA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16050303 143 + 59632846 TAAAGATTACAGGAAAGCTAATAGA-------GTAAACAGCTTGC------TTTAACTCATCAGGATAATAATTACTTGAAATACAAATAACTGATCTGAA-TTTTT-----ACCC-AATGTATAAAAATATTCTTTGGGAAAACAG----GTTAAATTCTC-TGATA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1221491 113 + 1922530 TAAAGATTATAGTAAATCTGATGACA------------------C------AGTAAATAATTT------------CTTGAAGTGGAA--TAACAATCTGAA-TTTTA-CTTAATAC-AAGAAAAAATTCTA-----CAGGAAAATAT----GTTAAATTATG-T---- i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=686301.000000 s hg38.chrUn_KI270746v1 49555 89 + 66486 ATTTCAGACATTAAGTACCAGAGTATCGTGTTCCCTG-CCCCCTCACCCTTGT--TTGTACTAATTAATTACTCCTTGAAAAAACCTGGCAC s panTro5.chr2A 90608231 89 + 111504155 ATTTCAGACATTAAGTACCAGAGTATGGTGTTCCCTG-CCCCCTCACCCTTGT--TCGTACTAATTAATTACTCCTTGAAAAAACCTGGCAC i panTro5.chr2A C 0 C 0 s panPan2.chr7 155960780 89 + 162613886 ATTTCAGACATTAAGTACCAGAGTATGGTGTTCCCTG-CCCCCTCACCCTTGT--TTGTACTAATTAATTACTCCTTGAAAAAACCTGGCAC i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102833867 89 + 110113093 ATTTCAGACATTAAGTACCAGAGTATGGTGTTCCCTGCCCCCCCCACCCTTGT--TTGTACTAATTAATTACTCCTTGAAAAAACCTGGCA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450522 81 + 185818997 ATTTAAGA--------ACCAGAGTATGGTGCTCCCTG-CTCCCCCACCCTTGT--TTGTACTAATTAACTACTCCTTGAAAAAACCTGGCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940250 81 + 192294377 ATTTAAGA--------ACCAGAGTATGGTGCTCCCTG-CTCCCCCACCCTTGT--TTGTACTAATTAACTACTCCTTGAAAAAACCTGGCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7908866 81 + 15219753 ATTTAAGA--------ACCAGAGTATGGTGCTCCCTG-CTCCCCCACCCTTGT--TTGTACTAATTAACTACTCCTTGAAAAAACCTGGCAC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553031 81 + 11639508 ATTTAAGA--------ACCAGAGTATGGTGCTCCCTG-CTCCCCCACCCTTGT--TTGTACTAATTAACTGCTCCTTGAAAAAACCTGGCAC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120404594 81 + 127223203 ATTTAAGA--------ACCAGAGTATGGTGTTCCCTG-CTCCCCCACCCTTGT--TTGTACTAATTAACTACTCCTTGAAAAAACCTGGCAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1530908 81 - 2854183 ATTTAAGA--------ACCAGAGTATGGTGCTCCCTG-CTCCCCCACCCTTGT--TTGTACTAATTAACTACTCCTTGAAAAAACCTGGCAC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237468 81 + 27496150 ATTTAAGA--------ACCAGAGTATGGTGTTCCCTG-CTCCCCTACCCTTGT--TTGTACTAATTAACTACTCCTTGAAAAAACCTGGCAC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33687871 88 - 128169293 ATTTAAGACATTAAGTACCAGAGTATAGTTTTCCCAA-ACCCCCTA-CCTTGT--TTTTACTAATTAATTACTCCTTGAAAAAACCTGGGAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17026334 88 + 19594188 ATTTAAGACATTAAGTACCAGAGTACAGTTTTCCCGA-CCCCCCTA-CCTTGT--TTGTACTGATTAATTACTCCTTGAAAAAACCTGGGGC i saiBol1.JH378140 I 199 C 0 s cebCap1.NW_016107335v1 4913948 88 - 11686629 ATTTAAGACATTAAGTACCAGAGTACAGTTTTCCCAA-CCCCCCTA-CCTTGT--TTGTATTGATTAATTACTCCTTGAAAAAACCTGGGAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3262974 88 - 4527795 ATTTAAGACATTAAGTACCAGAGTATAGTTTTCCCGA-CCCCCCTA-CCTTGT--TTTTACTGATTAATTACTCCTTGAAAAAACCTGGGAC i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5479452 84 - 12253515 -TTTTAATGCATAAGTATCAGGGTATGGGGCTTTTCC-CTTCTTTA----TAC--TCAGATTTATATACTACTCCTCAAAAAAACTTGGCAC i otoGar3.GL873572 C 0 I 150 s canFam3.chr16 16050446 87 + 59632846 CTTTAACA-AATAAATACTTGGGT-TATTTATTACTG-TTGTTTTGTTTATAT--GCAGACTTATGTGTTACTTCCTGAAAAAGTCTGATAT i canFam3.chr16 C 0 I 2 s dasNov3.JH575209 1221604 83 + 1922530 ATTTCAAGAAGTAAGTATCAGGGA--------TCCTT-CCCCCTCTTCTTTATACTCAGACTTATGCTTTGCTACCTGAAATGACCTATTTT i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=136364.000000 s hg38.chrUn_KI270746v1 49644 15 + 66486 CTACCTAAGTAGAAG s panTro5.chr2A 90608320 15 + 111504155 CTACCTAAGTAGATG i panTro5.chr2A C 0 C 0 s panPan2.chr7 155960869 15 + 162613886 CTCCCTAAGTAGATG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102833956 12 + 110113093 ---CCTAAGTAGATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450603 15 + 185818997 CTACCTAAGTAGATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940331 15 + 192294377 CTACCTAAGTAGATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7908947 15 + 15219753 CTACCTAAGTAGATG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553112 15 + 11639508 CTACCTAAGTAGATG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120404675 15 + 127223203 CTACCTAAGTAGATG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1530989 15 - 2854183 CTACCTAAGTAGATG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237549 15 + 27496150 CTACCTAAGTAGATG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33687959 15 - 128169293 CTACATAAGTAGATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17026422 15 + 19594188 CTACATAAGTAGATA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4914036 15 - 11686629 CTACATAAGTAGATA i cebCap1.NW_016107335v1 C 0 I 315 s aotNan1.NW_018506100v1 3263062 15 - 4527795 CTACATAAGTAGATA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5479686 15 - 12253515 ctacctgggaggctg i otoGar3.GL873572 I 150 I 9 s canFam3.chr16 16050535 12 + 59632846 ACACATCGACAA--- i canFam3.chr16 I 2 C 0 s dasNov3.JH575209 1221687 15 + 1922530 CTACACAAGTAGATG i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=47801.000000 s hg38.chrUn_KI270746v1 49659 6 + 66486 ---AATTAT s panTro5.chr2A 90608335 6 + 111504155 ---AATTAT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155960884 6 + 162613886 ---AATTAT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102833968 5 + 110113093 ---AA-TAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450618 6 + 185818997 ---AATTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940346 6 + 192294377 ---AATTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7908962 6 + 15219753 ---AATTAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553127 6 + 11639508 ---AATTAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120404690 6 + 127223203 ---AATTAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531004 6 - 2854183 ---AATTAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237564 6 + 27496150 ---AATCAT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33687974 6 - 128169293 ---AATTAt i calJac3.chr8 C 0 I 323 s saiBol1.JH378140 17026437 6 + 19594188 ---AATTAT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4914366 6 - 11686629 ---AATTAT i cebCap1.NW_016107335v1 I 315 C 0 s aotNan1.NW_018506100v1 3263077 6 - 4527795 ---AATTAT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5479710 6 - 12253515 ---gatcat i otoGar3.GL873572 I 9 C 0 s canFam3.chr16 16050547 6 + 59632846 ---CATTCT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1221702 6 + 1922530 TACAAT--- i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=34027.000000 s hg38.chrUn_KI270746v1 49665 3 + 66486 GTA s panTro5.chr2A 90608341 3 + 111504155 GTA i panTro5.chr2A C 0 C 0 s panPan2.chr7 155960890 3 + 162613886 GTA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102833973 3 + 110113093 GTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450624 3 + 185818997 GTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940352 3 + 192294377 GTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7908968 3 + 15219753 GTA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553133 3 + 11639508 GTA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120404696 3 + 127223203 GTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531010 3 - 2854183 GTA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237570 3 + 27496150 GTA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688303 3 - 128169293 GTA i calJac3.chr8 I 323 C 0 s saiBol1.JH378140 17026443 3 + 19594188 GTA i saiBol1.JH378140 C 0 I 311 s cebCap1.NW_016107335v1 4914372 3 - 11686629 GTA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3263083 3 - 4527795 GTA i aotNan1.NW_018506100v1 C 0 I 311 s otoGar3.GL873572 5479716 3 - 12253515 tta i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16050553 2 + 59632846 -GA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1221708 3 + 1922530 Gta i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=113626.000000 s hg38.chrUn_KI270746v1 49668 9 + 66486 TATTTAAAA s panTro5.chr2A 90608344 9 + 111504155 TATTTAAAA i panTro5.chr2A C 0 C 0 s panPan2.chr7 155960893 9 + 162613886 TATTTAAAA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102833976 9 + 110113093 TATTTAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450627 9 + 185818997 TATTTAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940355 9 + 192294377 TATTTAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7908971 9 + 15219753 TATTTAAAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553136 9 + 11639508 TATTTAAAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120404699 9 + 127223203 TATTTAAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531013 9 - 2854183 TATTTAAAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237573 9 + 27496150 TATTTAAAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688306 9 - 128169293 TATTTAAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17026757 9 + 19594188 TATTTAAAA i saiBol1.JH378140 I 311 C 0 s cebCap1.NW_016107335v1 4914375 9 - 11686629 TATTTAAAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3263397 9 - 4527795 TATTTAAAA i aotNan1.NW_018506100v1 I 311 C 0 s otoGar3.GL873572 5479719 9 - 12253515 aatccaaga i otoGar3.GL873572 C 0 I 137 s canFam3.chr16 16050555 9 + 59632846 TATCTAAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1221711 9 + 1922530 tatttaaaa i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=97469.000000 s hg38.chrUn_KI270746v1 49677 9 + 66486 TTATCCAGA s panTro5.chr2A 90608353 9 + 111504155 TTATCCAGA i panTro5.chr2A C 0 C 0 s panPan2.chr7 155960902 9 + 162613886 TTATCCAGA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102833985 9 + 110113093 TTATCCAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450636 9 + 185818997 TTATCCAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940364 9 + 192294377 TTATCCAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7908980 9 + 15219753 TTATCCAGA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553145 9 + 11639508 TTATCCCGA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120404708 9 + 127223203 TTATCCAGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531022 9 - 2854183 TTATCCAGA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237582 9 + 27496150 TTATCCAGA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688315 9 - 128169293 TTATCCAGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17026766 9 + 19594188 TTATCCAGA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4914384 9 - 11686629 TTATCCAGA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3263406 9 - 4527795 TTATCCAGA i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16050564 9 + 59632846 TTATTAAAA i canFam3.chr16 C 0 I 1 s dasNov3.JH575209 1221720 9 + 1922530 ttattaaaa i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5479728 137 - 12253515 I a score=3151281.000000 s hg38.chrUn_KI270746v1 49686 337 + 66486 TGCTCAGGAAAATACTT--AGATGTTTC--CCTCATGA-TAAGTTAAATAATATGTCATATCTTCAACTGATGTCCCT--TATCATAGTTTGAAATG---AACTTATTC-CCTATTTAGCAGAATGGTTTCCAAGTCAAAAATTTATGGTGATACTGTAAACATAAAATAGA----TACACATGAACAAAAGGAACGGGAGGAATGGCTTTTCTCCCTTTGGATGTAATAAATAC--AGCCAGCTCCCAGTTTCAAACTGCCACTCCTGTCTTCTCTTACCC-TGCTCTCCTTGAGATCCCTT----TAGAGAAGTGCATCAGGTTCTTTGCACAACGGATGGATGGGGTCAGGTTAGT s panTro5.chr2A 90608362 337 + 111504155 TGCTCAAGAAAATACTT--AGGTGTTTC--CCTCACCA-TAAGTTAAATAATATGTCATATCTTCAACTGATGTCCCT--TATCATAGTTTGAAATG---AACTTATTC-CCTATTTAGCAGAATGGTTTCCAAATCAAAAATTTATGATGATACTGTAAGCATAAAATAGA----AACACATGAACAAAAGGAATGGGAGGAATGGCTTTTTTCCCTTTGGATGTAATAAATAC--AGCCAGCTCCCAGTTTCAAACTGCCACTCCTGTCTTCTCTTACCC-TGCTCTCCTTGAGATCCCTT----TTGAGAAGTGCATCAGCTTCTTTGCACAACAGATAGATGGGGTCAGGTTAGT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155960911 336 + 162613886 TGCTCAGGAAAATACTT--AGATGTTTC--CCTCACAGTTAAGTTAAATAATATGTCATATCTTCAACTGATGTCCCT--TATCATAGTTTGAAATG---AACTTATTC-CCTATTTAGCAGAATGGTTTCCAAGTCAAAAATTTATGGTGATACTGTAAGCATAAAATAGA----TGCACATGAACAAAAGGAACGGGAGGAATGGCTTTT-TCCCTTTGGATGTAACAAATAC--AGCCACCTCCCAG-TTCAAACTGCCACTCCTGTCTTCTCTTACCC-TGCTCTCCTTGAGATCCCTT----TTGAGAAGTGCATCAGCTTCTTTGCACAACAGATGGATGGGGTCAGGTTAGT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102833994 337 + 110113093 TGCTCAGGAAAATACTT--AGATGTTTC--CCTCACAA-TAAGTTAAATAGTATGTCGTATTTTCAACTGATGTCCCT--TATCATAGTTTGAAATG---AACTTATTC-CCTATTTAGCAGAATGGTTTCCAAGTCAAAAATTTATGGTGATACTGTAAGCATAAAATAGA----TACACATGAACAAAAGGAACGGGAGGAATGGCTTTTTTCCCTTTGGATGTAATAAATAC--AGCCAGCTTCAAGTTTCAAACTGCCACTCCTGTCTTCTCTTACCC-TGCTCTCCTTGAGATCCCTT----TTGAGAAGTGCATCCGCTTCTTTGAACAACAGATGGATGGGGTCAGGTTAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450645 334 + 185818997 TGCTCAGGAAAATACTT--TGATGTTTC--CCTCCCAA-CAAGTTAAATAATATGTCATATCTTCAACTGATGTCCCT--CATCATAGTTTGAAATG---AACTTATTC-CCTATTTAGCAGAATGATTTCCAAGT-AAAACTTTATGGTGATACTGTAAGCATAAAATAGA----TACACATGAATAAAAGGAACGGGAGGAATGGTTTTTTTCTCTTTGGATGTAATAAATAC--AGCCAGCTTCCAGTTTCAAACTGCCACTCCTGTCTTCTCTTAACC-TGCTCTCCTTGAGATCCCTT------GAGAGATGCATCAGCTTCTTTCAACAACAGATGTATGGGATCAGCTTAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940373 334 + 192294377 TGCTCAGGAAAATACTT--TGATGTTTC--CCTCCCAA-CAAGTTAAATAATATGTCATATCTTCAACTGATGTCCCT--TATCATAGTTTGAAATG---AACTTATTC-CCTATTTAGCAGAATGATTTCCAAGT-AAAACTTTATGGTGATACTGTAAGCATAAAATAGA----TACACATGAATAAAAGGAACGGGAGGAATGGTTTTTTTCCCTTTGGATGTAATAAATAC--AGCCAGCTTCCAGTTTCAAACTGCCACTCCTGTCTTCTCTTAACC-TGCTCTCCTTGAGATCCCTT------GAGAGATGCATCAGCTTCTTTCAACAACAGATGTATGGGATCAGCTTAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7908989 334 + 15219753 TGCTCAGGAAAATACTT--TGATGTTTC--CCTCCCAA-CAAGTTAAATAATATGTCATATCTTCAACTGATGTCCCT--TATCATAGTTTGAAATG---AACTTATTC-CCTATTTAGCAGAATGATTTCCAAGT-AAAACTTTATGGTGATACTGTAAGCATAAAATAGA----TACACATGAATAAAAGGAACGGGAGGAATGGTTTTTTTCCCTTTGGATGTAATAAATAC--AGCCAGCTTCCAGTTTCAAAGTGCCACTCCTGTCTTCTCTTAACC-TGCTCTCCTTGAGATCCCTT------GAGAGATGCATCAGCTTCTTTCAACAACAGATGTATGGGATCAGCTTAGT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553154 333 + 11639508 TGCTCAGGAAAATACTT--TGATGTTTC--CCTCCCAA-CAAGTTAAATAATATGTCATATCTTCAACTGATGTCCCT--TATCATAGTTTGAAATG---AACTTATTC-CCTATTTAGCAGAATGATTTCCAAGT-AAAACTTTATGGTGATACTGTAAGCATAAAATAGA----TACACATGAATAAAAGGAACGGGAGGAATGG-TTTTTTCCCTTTGGATGTAATAAATAC--AGCCAGCTTCCAGTTTCAAACTGCCACTCCTGTCTTCTCTTAACC-TGCTCTCCTTGAGATCCCTT------GAGAGATGCATCAGCTTCTTTCAACAACAGATGTGTGGGATCAGCTTAGT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120404717 334 + 127223203 TGCTCAGTAAAATACTT--TGATGTTTC--CCTCCCAA-CAAGTTAAATAATAGGTCATATCTTCAACTGATGTCCCT--TATCATAGTTTGAAATG---AACTTATTC-CCTATTTAGCAGAATGGTTTCCAAGT-AAAACTTTATGGTGATACTGTAAGCATAAAATAGA----TACACATGAATACAAGGAACGGGAGGAATGGTTTTTTCCCCTTTGGATGTAATAAATAC--AGccagcttccagtttcaaactgccactccagtcttcTCTTAACC-TGTTCTCCTTGAGATCCCTT------GAGAGATGCATCAGTTTCTTTCAACAACAGATGTATGGGATCAGCTTAGT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531031 334 - 2854183 TGCTCAGGAAAATACTT--TGATGTTTC--CCTCCCAA-CAAGTTAAATAATATGTCATATCTTCAACTGATGTCCCT--TATCATAGTTTGAAATG---AACTTACTC-CCTATTTAGCAGAATGATTTCCAAGT-AAAACTTTATGGTGATACTGTAAGCATAAAATAGA----TACACATGAATAAAAGGAACGGGAGGAATGGTTTTTTTCCCTTTGGATGTAATAAATAC--AGCCAGCTTCCAGTTTCAAACTGCCACTCCTGTCTTCTCTTAACC-TGCTCTCCTTGAGATCCCTT------GAGAGATGCATCAGCTTCTTTCAACAACAGATGTATGGGATCAGCTTAGT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237591 334 + 27496150 TGCTCAGGAAAATACTT--TGATGTTTC--CCTCCCAA-CAAGTTAAATAATATGTCATATCTTCAACTGATGTCCCT--TATCATAGTTTGAAATG---AACTTATTC-CCTATTTAGCAGAATGGTTTCCAAGT-AAAACTTTATGGTGATACTGTAAGCATAAAATAGA----CACACATGAATAAAAGGAATGGGAGGAATGGGTTTTTTCCCTTTGGATGTAATAAATAC--AGCCAGCTTCCAGTTTCAAACTGCCACTCCTGTCTTCTCTTAACC-TGCTCTCCTTGAGATCCCTT------GAGAGATGCATCAGCTTCTTTGAACAACAGATGTATGGGATCAGGTTAGT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688324 336 - 128169293 TGATCGGGAAAATACTT--TGATCTTTC--CCCTGCAA-CAAGTTAAATA--ATGTCATA-ATTCAACTGATGTACCT--TATCATAGTTTGATATT---AACTTAATT-CCTATTTAGCAGAATGATTTCCAAGTCAAAAATTTATGGTGATATTGTGAGCATAAAATAGA----TAAACATGAACAAAAGGGAACGTAGAAATTG-TTTTTTCCCCTTGGATATAATAAATAT--AGCCAGCTTCCAGTTTCAAACTGCCACTCCTGTGTTCTCTTAGCC-TGCTCTCCTTGAGATTCCCTGACCCTGAGAGGTGCATCGGCTTCTCTGAACAAGAGATGGATAGGGTCA-GTTAGt i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17026775 339 + 19594188 TGATCAGAAAAATACTT--TGATCTTTC--CCCTGCAA-CAAGTTAAATA--ATGTCATA-ATTCAACTGATGTACCT--TATCATAGTTTGAAATT---AACTTATTT-CCTATTTTGCAGAATGAGTTCGAAGTCAAAAATTTATGGTGATATTGTGAGCATAAAATAGA----TACACATGAACAAAAGGGAAGGTAGAAATTG-TTTTTTCCCCTTGGATGTAATAAATACAGAGCCAGCTTCCAGTTTCAAACTGCCATTCCTGTGTTCTCTTACCC-TGCTCTCCTTGAGATCCCCTGACCCTGAGAGGTGCATCAGCTTCTTTGAACAAGAGATGGATAGGGTCAGGTTAGT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4914393 341 - 11686629 TGATCAGGAAAATACTT--TGATCTTTC--CCCTGCAA-CAAGTTAAATAATATGTCATA-ATTCAACTGATGTGCCT--TATCATAGTTTGAAATT---AACTTATTT-CCTATTTAGCAGAATGATTTCGAAGTCAAAAATTTATGGTGATATTGTAAGCATAAAATAGA----TACACATGAACAAAAGGGAAGGTAGAAATTG-TTTTTTCCCCTTGGATGTAATAAATACAGAGCCAGCTTCCAGTTTCAAACTGCCACTCCTGTGTTCTCTTACCC-TGCCCTCCTTGAGATCCCCTGACCCTAAGAGGTGCATCAGCTTCTTTGAACAAGAGATGGATAGGGTCAGGTTAGT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3263415 339 - 4527795 TGATCAGGAAAATACTT--TGATCTTTC--CCCTGCAA-CAAGTTAAATAGTATGTCATA-ATTCAATTGATGTACCT--TATCATAGTTTGAAATT---AACTTATTT-CCTATTTAGCAGAATGATTTCGAAGTCAAAAATTTATGGTGCTATTGTGAGCATAAAATAGA----TACACATGAACAAAAGAGAAGATAGAAATTG-TTTTTTCCCCTTGGATGTAATAAATAC--AGCGAGCTTCCAGTTTCAAACTGCCACTCCTGTGTTCTCTTACCC-TGCTCTCCTTGAGATCCCCTGACCCTGAGAGGTGCATCAGCTTCTCTGAACAAGAGATGGATAGGGTCAGGTTAGT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5479865 313 - 12253515 TGCTTAGGAATATACTTTCTGATCTTTCTGTCTCCTAA-CAAGTTACAAACTATGTTAGAGCTTCAGCTGATGTCACT--TATCATAGTTTAAAATGCTAAACTCACTT-CCTATTTAGTAAAATGGTTTCTAAGT-AAAAA----------------AAAAAAAAAATTGATTGTTGCACATGAACAAAAGAGAGGGGAG-AATGGGTTTTCCCCCTGTGGTTGCAATAAACAA------AGCTTCCAACTTCAAAATGCC-------TTTTGTCTTAGCCATTCCCTCCATTACACCCCTT------GAAAGGCACATCACCTTCTCTGAACAAGAGAAGGATGGGGTA----TAG- i otoGar3.GL873572 I 137 C 0 s canFam3.chr16 16050574 254 + 59632846 TACTCCGGAAAATCC----TGATTTTTC--CC-----A-TAAGTTAAATAATATGCCACATTTTCAACTGACATCATTTCTATTGCAGTTTGAAATGCTGAACTCGTTTACCTATTTAGCATAACAGTTTCCAAGTTGATAATTTATGGTTATAGTGTGAGCATAAAACAGA----TGGACATGAGCAGAAAGGAAGGGGGTAATC--TTTTTTCCCTTCAGTGTTAATAATTAC-------------------AAATTGCCTCTCCT-TGTTCTCTTAAAC-TGCTCTTCTT------------------------------------------------------------------ i canFam3.chr16 I 1 C 0 s dasNov3.JH575209 1221729 284 + 1922530 taCTCAGGAAAATCCTTTCTGATATTTT--CC-CTTAA-CAAATTACATA--ATGTCAGCTCTTCAACTGAT-----C--TATATTAGTTTGAAATGCTAAACTCATTG-CCTATTTAGCAAAATTTTTTCTCAGCCAATAATTTATGGCTATAATATAAACATAAAATGGA----TACACATGAACAGAAGGGAAGGGGGAAAT---TTTTTTCC--------------------------------------AAATTGCCTCTCCT----TGTCTTAAAC-TATTTTCCTTCACATCACTT------GAGAGATACATTAGCTCCTTTGAACAAGGGTGGGGTGGGGTAGGT----- i dasNov3.JH575209 C 0 I 26 e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=19110.000000 s hg38.chrUn_KI270746v1 50023 2 + 66486 TT s panTro5.chr2A 90608699 2 + 111504155 TT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961247 2 + 162613886 TT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834331 2 + 110113093 TT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450979 2 + 185818997 TT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940707 2 + 192294377 TT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7909323 2 + 15219753 TT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553487 2 + 11639508 TT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405051 2 + 127223203 TT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531365 2 - 2854183 TT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237925 2 + 27496150 TT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688660 2 - 128169293 tt i calJac3.chr8 C 0 I 3 s saiBol1.JH378140 17027114 2 + 19594188 TT i saiBol1.JH378140 C 0 I 3 s cebCap1.NW_016107335v1 4914734 2 - 11686629 TT i cebCap1.NW_016107335v1 C 0 I 19 s aotNan1.NW_018506100v1 3263754 2 - 4527795 TT i aotNan1.NW_018506100v1 C 0 I 19 e dasNov3.JH575209 1222013 26 + 1922530 I e canFam3.chr16 16050828 0 + 59632846 C e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5480178 0 - 12253515 C a score=44359.000000 s hg38.chrUn_KI270746v1 50025 18 + 66486 TTTGGG------------------------ttttttgttt--gt s panTro5.chr2A 90608701 42 + 111504155 TTTGGGGTTtttgtttatttgtttgtttgtttgtttgttt--gt i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961249 24 + 162613886 TTGGGGGttttt------------------ttgtttgttt--at i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834333 26 + 110113093 TTTGGGttttttgt----------------ttgtttgttt--gt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450981 18 + 185818997 TTTGGG------------------------TTGtttgttt--gt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940709 18 + 192294377 TTTGGG------------------------TTGtttgttt--gt i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7909325 18 + 15219753 TTTGGG------------------------TTGtttgttt--gt i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553489 18 + 11639508 TTTGGG------------------------TTGtttgttt--gt i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405053 19 + 127223203 TTGGGGt-----------------------ttttttgttt--gt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531367 18 - 2854183 TTTGGG------------------------TTGtttgttt--gt i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237927 18 + 27496150 TTTGGG------------------------ttttttgttt--gt i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688665 15 - 128169293 -----------------------------tttgtttattttggt i calJac3.chr8 I 3 I 1 s saiBol1.JH378140 17027119 15 + 19594188 -----------------------------tttgtttgttttggt i saiBol1.JH378140 I 3 I 1 s otoGar3.GL873572 5480178 17 - 12253515 -TTGGA------------------------TAGACAGCTT--GT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16050828 12 + 59632846 TTCGAG------------------------TTCCTA-------- i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1222013 26 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e aotNan1.NW_018506100v1 3263756 19 - 4527795 I e cebCap1.NW_016107335v1 4914736 19 - 11686629 I a score=364825.000000 s hg38.chrUn_KI270746v1 50043 48 + 66486 ttttgagacggagtcttgcttctttgcccaggctggagtgtgatg-gtg s panTro5.chr2A 90608743 48 + 111504155 ttttgaggtggagtctcgcttctttgcccaggctggagtgcaatg-gtg i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961273 48 + 162613886 ttttgagatggagtctcgcttctttgcccaggctggagtgcaatg-gtg i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834359 47 + 110113093 ttttgagatggagtctcgcttcttcgcccaggc-agagtgcaatg-gtg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178450999 48 + 185818997 ttttgagatggagtctcgcttctacgcccaggatggagtgcaatg-gtg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940727 48 + 192294377 ttttgagatggagtctcgcttctacgcccaggatggagtgcaatg-gtg i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7909343 48 + 15219753 ttttgagatggagtctcgcttctacgcccaggatggagtgcaatg-gtg i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553507 48 + 11639508 ttttgagatggagtctcgcttctacgcccaggatggagtgcaatg-gtg i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405072 48 + 127223203 ttttgagacggagtctcgcttctacgcccaggatggagtgcaatg-gtg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531385 48 - 2854183 ttttgagatggagtctcacttctacgcccaggatggagtgcaatg-gtg i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237945 48 + 27496150 ttttgagacggagtctcgcttctacgcccaggatggagtgcaatg-gtg i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688681 49 - 128169293 ttttgaaacgaagtctcacttcttcgcccgggcgggagtgcaatgcatg i calJac3.chr8 I 1 C 0 s saiBol1.JH378140 17027135 49 + 19594188 ttttgaaacggagtctcacctcttcgcccaggctggagtgcaatgcatg i saiBol1.JH378140 I 1 C 0 s cebCap1.NW_016107335v1 4914755 49 - 11686629 ttttgaaatggagtctcacttcttcgcataggctggagtgcaatgcatg i cebCap1.NW_016107335v1 I 19 C 0 s aotNan1.NW_018506100v1 3263775 49 - 4527795 ttttgaaacggagtctcacttctttgcccaggctggagtgcaatgcatg i aotNan1.NW_018506100v1 I 19 C 0 s canFam3.chr16 16050840 27 + 59632846 ----------------TGCTTTTTTGAACAAGGGGTAAGGGAG------ i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1222013 26 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5480195 0 - 12253515 C a score=936535.000000 s hg38.chrUn_KI270746v1 50091 117 + 66486 c---gatcttggctcactgcaacctccgtctcctgggttcaaacaattctcctgcctcagcttccctagcagctgggattacaggcacatgacaccacgcgcggctaaatttc-tttgtat s panTro5.chr2A 90608791 117 + 111504155 t---gatcttggctcactgcaacctccatctcctgggttcaagcaattctcctgcctcagcctccctagcagctgggattacaggcacatgccaccacgcacggctaaatctc-tttgtat i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961321 117 + 162613886 c---gatcttggctcactgcaacctccgtctcctgggttcaagcaattctcctgcctcagcctccctagcagctgggattacaggcacatgccaccacacccggctaaatttc-tttgtat i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834406 117 + 110113093 t---gatcttggctcactgcaacctccgtctcctgggttcaagcaatgctcctgcctcagcctccctagcagctgggaatacaggcacacgccaccacacccggctaaatttc-tttgtat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451047 117 + 185818997 c---gatcttggctcactgcaacctccgcctcctgggttcaagcaactctcctgcctcagcctccctagtagctaggattacaggcacatgccaccatgcctggctaaatttg-tttgtat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940775 117 + 192294377 c---gatcttggctcactgcaacctccacctcctgggttcaagcaactctcctgcctcagcctccctagtagctaggattacaggcacatgccaccatgcctggctaaatttg-tttgtat i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7909391 117 + 15219753 c---aatcttggctcactgcaacctccgcctcctgggttcaagcaactctcctgcctcagcctccctagtagctaggattacaggcacatgccaccatgcctggctaaatttg-tttgtat i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553555 117 + 11639508 c---gatcttggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctccctagtagctaggattacaggcacatgccaccatgcctggctaaatttg-tttgtat i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405120 117 + 127223203 c---gattttggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctccctagtagctgggattacaggcacatgccaccatgcctggctaaatttg-tttgtat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531433 117 - 2854183 c---gatcttggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctccctagtagctaggattacaggcacatgccaccatgcctggctaaatttg-tttgtat i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20237993 117 + 27496150 c---gatcttggctcactgcaacctccgcctcctggattcaagtaattctcctgcctcagcctccctagtggctgggattacaggcacatgccaccatgcctggctaaatttg-tttgtat i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688730 121 - 128169293 ccatgatctcagctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctccccagtagctgggattacaggcatgtgccaccaagcccgactaattttgttttgtat i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17027184 121 + 19594188 ccatgatctcagctcactgcaacctccgcctcccaggttcaagcaattctcctgcgtcagcctccccagtagctgggattacaggcatgttccaccaagcccgactaatttggttttgtat i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4914804 121 - 11686629 ccatgatcttagctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctccccagtagctgggattacaggcatgtgccacgaagcccaactaattttgttttgtat i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3263824 121 - 4527795 ccatgatctcagttcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctccccagtagctgggattacaggcatgtgccaccaagcccgactaattttgttttgtat i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5480195 35 - 12253515 ------------------------TTTGTTTTGTTTATACAAACA-------------------------------------------------------------AAAGTTC-TTTACAC i otoGar3.GL873572 C 0 C 0 e dasNov3.JH575209 1222013 26 + 1922530 I e canFam3.chr16 16050867 0 + 59632846 C e tarSyr2.KE936121v1 74502 9918 + 204143 I a score=314060.000000 s hg38.chrUn_KI270746v1 50208 34 + 66486 ttttagtagagacggggtttcaccatgttggcca s panTro5.chr2A 90608908 34 + 111504155 ttttagtagagacggggtttcaccacgttggcca i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961438 34 + 162613886 ttttagtagagacggggtttcaccatgttggcca i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834523 34 + 110113093 ttttagtagagacagggtttcaccatgttggcca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451164 34 + 185818997 ttttagtagagacagggtttcaccatgttggcca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940892 34 + 192294377 ttttagtagagacagggtttcaccatgttggcca i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7909508 34 + 15219753 ttttagtagagacagggtttcaccatgttggcca i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553672 34 + 11639508 ttttagtagagacggggtttcaccatgttggcca i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405237 34 + 127223203 ttttagtagagacggggttttaccatgtcggcca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531550 34 - 2854183 ttttagtagagacggggtttcaccatgttggcca i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20238110 34 + 27496150 ttttagtagagacggggtttcaccatgttggcca i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688851 34 - 128169293 ttttagtagagacagggtttcaccatgtcaacca i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17027305 34 + 19594188 ttttagtagagacagggtttcaccatgtcgacca i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4914925 34 - 11686629 ttttagtagagacagagtttcaccatgttgacca i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3263945 34 - 4527795 ttttagtagagacagggtttcaccatgtcgacca i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1222013 26 + 1922530 I e canFam3.chr16 16050867 0 + 59632846 C e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5480230 0 - 12253515 C a score=707933.000000 s hg38.chrUn_KI270746v1 50242 88 + 66486 ggttggcctcgaactcct-gacctcaagtgatttgccc-cctcagcctcccaaagtgttgggattacaggcatgagccactgcacccagc s panTro5.chr2A 90608942 88 + 111504155 ggttggcctcgaactcct-gacctccagtgatctgccc-cctcagcctcccaaagtgctgggattacaggcatgagccactgtgcccagc i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961472 88 + 162613886 ggttggcctcgaactcct-gacctcaagtgatctgccc-cctcagcctcccaaagtgctgggattacaggcatgagccactgcgcccggc i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834557 89 + 110113093 ggttggcctcaaactcct-gacctcaagtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccatggcgcccggc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451198 89 + 185818997 ggttggtctcgaactcct-gatctcaagtgatccgcccacctcagcctcccaaaatgttgggattacaggcgtgagccatggcgcctggc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184940926 89 + 192294377 ggttggtctcgaactcct-gatctcaagtgatccgcccacctcagcctcccaaaatgttgggattacaggcgtgagccatggcgcctggc i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7909542 89 + 15219753 ggttggtctcgaactcct-gatctcaagtgatccgcccacctcagcctcccaaaatgttgggattacaggcgtgagccatggcgcctggc i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553706 89 + 11639508 ggttggtctcgaactcct-gatctcaagtgatccgcccacctcagcctcccaaagtgttgggattacaggcgtgagccatggcgcctggc i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405271 89 + 127223203 ggttggtctcgaactcct-gatctcaagtgatccgcccgcctcagcctcccaaagtgttgggattacaggcgtgagccatggcacctggc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531584 89 - 2854183 ggttggtctcgaactcct-gatctcaagtgatccgcccacctcagcctcccaaagtgttgggattacaggcgtgagccatggcgcctggc i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20238144 89 + 27496150 ggttggtctcgaactcct-gacctcaagtgatccgcctgcctcagcctcccaaagtgttgggattacaggcgtgagccatggcgcctggc i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688885 90 - 128169293 ggttggtcttgaactcctggacctcaagtgatctgctggcctcagcctcacaaagtgctggaattacaggcataagccactgtgtctggc i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17027339 90 + 19594188 ggttggtctcgaactcctggacctcaagtgatctgcccgcctcagcctctcaaagtgctggaattacaggcatgagccactgcacctggc i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4914959 90 - 11686629 ggttggtcttgaactcctggacctcaagtgatctgcccgcctcagcctctcaaagtgctggaattacaggcatgagccactgcgcctggc i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3263979 90 - 4527795 ggttggtctcaaactcctggacctcaagagatctgcccgcctcagcctcccaaagtgctggaattacaggcataagccactgcacctggc i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16050867 12 + 59632846 GGTTGAACTGGA------------------------------------------------------------------------------ i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1222013 26 + 1922530 I e tarSyr2.KE936121v1 74502 9918 + 204143 I e otoGar3.GL873572 5480230 0 - 12253515 C a score=70962.000000 s hg38.chrUn_KI270746v1 50330 10 + 66486 cGAG----------TTTGTT s panTro5.chr2A 90609030 10 + 111504155 TGAG----------TTTGTT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961560 10 + 162613886 cGAG----------TTTGTT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834646 10 + 110113093 cGAG----------TTTGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451287 10 + 185818997 cAAG----------TTTGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184941015 10 + 192294377 cAAG----------TTTGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7909631 10 + 15219753 cAAG----------TTTGTT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553795 10 + 11639508 cAAG----------TTTGTT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405360 10 + 127223203 cAAG----------TTTGTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531673 10 - 2854183 cAAG----------TTTGTT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20238233 10 + 27496150 cAAG----------TTTGTT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688975 10 - 128169293 cCAG----------TTTGTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17027429 12 + 19594188 cCAGTT--------TTTGTT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4915049 10 - 11686629 cCAG----------TTTGTT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3264069 10 - 4527795 cCAG----------TTTGTT i aotNan1.NW_018506100v1 C 0 I 12 s tarSyr2.KE936121v1 84420 20 + 204143 TGAGGTAGGATTCATTTGTC i tarSyr2.KE936121v1 I 9918 I 2517 s canFam3.chr16 16050879 5 + 59632846 ---------------TAGTT i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1222013 26 + 1922530 I e otoGar3.GL873572 5480230 0 - 12253515 C a score=28592.000000 s hg38.chrUn_KI270746v1 50340 7 + 66486 TTGTGTT s panTro5.chr2A 90609040 5 + 111504155 T--TGTT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961570 5 + 162613886 T--TGTT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834656 1 + 110113093 T------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451297 5 + 185818997 T--TGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184941025 5 + 192294377 T--TGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7909641 5 + 15219753 T--TGTT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553805 5 + 11639508 T--TGTT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405370 5 + 127223203 T--TGTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531683 5 - 2854183 T--TGTT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20238243 5 + 27496150 T--TGTT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688985 5 - 128169293 T--CGTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17027441 5 + 19594188 T--TGTT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4915059 5 - 11686629 T--TGTT i cebCap1.NW_016107335v1 C 0 C 0 s canFam3.chr16 16050884 5 + 59632846 T--TGTT i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1222013 26 + 1922530 I e tarSyr2.KE936121v1 84440 2517 + 204143 I e otoGar3.GL873572 5480230 0 - 12253515 C e aotNan1.NW_018506100v1 3264079 12 - 4527795 I a score=31918.000000 s hg38.chrUn_KI270746v1 50347 9 + 66486 ATTAAATTG s panTro5.chr2A 90609045 9 + 111504155 ATTAAATTG i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961575 9 + 162613886 TTTAAATTG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834657 7 + 110113093 --TAAATTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451302 9 + 185818997 TTTAAATTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184941030 9 + 192294377 TTTAAATTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7909646 9 + 15219753 TTTAAATTG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553810 9 + 11639508 TTTAAATTG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405375 9 + 127223203 TTTAAATTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531688 9 - 2854183 TTTAAATTG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20238248 9 + 27496150 TTTAAACTG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33688990 7 - 128169293 TTTAAAT-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17027446 7 + 19594188 TTTAAAT-- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4915064 7 - 11686629 TTTAAAC-- i cebCap1.NW_016107335v1 C 0 C 0 s canFam3.chr16 16050889 4 + 59632846 GTAA----- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1222039 7 + 1922530 attatat-- i dasNov3.JH575209 I 26 C 0 e tarSyr2.KE936121v1 84440 2517 + 204143 I e otoGar3.GL873572 5480230 0 - 12253515 C e aotNan1.NW_018506100v1 3264079 12 - 4527795 I a score=29108.000000 s hg38.chrUn_KI270746v1 50356 4 + 66486 GTAT s panTro5.chr2A 90609054 4 + 111504155 GTAT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961584 4 + 162613886 GTAT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834664 4 + 110113093 GTAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451311 4 + 185818997 GTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184941039 4 + 192294377 GTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7909655 4 + 15219753 GTAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553819 4 + 11639508 GTAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405384 4 + 127223203 GTAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531697 4 - 2854183 GTAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20238257 4 + 27496150 ATAT i colAng1.NW_012115154v1 C 0 C 0 s otoGar3.GL873572 5480230 2 - 12253515 --AT i otoGar3.GL873572 C 0 I 2 s canFam3.chr16 16050893 4 + 59632846 GTAT i canFam3.chr16 C 0 I 1 s dasNov3.JH575209 1222046 4 + 1922530 gtat i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 84440 2517 + 204143 I e aotNan1.NW_018506100v1 3264079 12 - 4527795 I e cebCap1.NW_016107335v1 4915071 0 - 11686629 C e saiBol1.JH378140 17027453 0 + 19594188 C e calJac3.chr8 33688997 0 - 128169293 C a score=1261769.000000 s hg38.chrUn_KI270746v1 50360 135 + 66486 AAAAGATTTTTGAAAAATTAAGTCAGTGA-TTAAAAATCAAGACTACAGTAGTC-TCTCAATTTATTTTCTCTAACATGAAATGCTGACCCAGAAAAAAATTA-AGTAAAAACTGGTGG----------TCTATATTATCAAACTGTC s panTro5.chr2A 90609058 135 + 111504155 AAAAGATTTTTGAAAAATTAAGTCAGTGA-TTAAAAATCAAGACTACAGTAATC-TCTCAATTTATTTTCTCAAACATGAAATGCTGACCCAGAAAAAAGGTA-AGTAAAAATTGGTGG----------TCTATATTATCAAACTGTC i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961588 135 + 162613886 AAAAGATTTTTGAAAAATTAAGTTAGTGA-TTAAAAATCGAGACTACAGTAATC-TCTCAATTTATTTTCTCGAACATGAAATGCTGACCCAGAAAAAAAGTA-AGTGAAAATTGGTGG----------TCTATATTATCAAACTGTC i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834668 135 + 110113093 AAAAGATTTTTGAAAAATTAAGTCAGTGA-TTAAAAATCAAGACTACAGTAATC-TCTCAATTTATTTTCTCGAACGTCAAATGCTGACCCAGAAAAAAAATA-AGTGAAAATTGGTGG----------TCTATATTATCAAACTGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451315 134 + 185818997 TAAAGATTTTTGAAAAATTAAGTCAGTGA-TTAAAAACCAATACTACAGTAATC-TCTCAA-TTATTTTCTCCAACATCAAATGCTGACCCAGAAAAACAAAA-AGTGAAAACTGGTGG----------TCTATATTACAAAACTGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184941043 134 + 192294377 TAAAGATTTTTGAAAAATTAAGTCAGTGA-TTAAAAACCAATACTACAGTAATC-TCTCAA-TTATTTTCTCCAACATCAAATGCTGACCCAGAAAAACAAAA-AGTGAAAACTGGTGG----------TCTATATTACAAAACTGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7909659 134 + 15219753 TAAAGATTTTTGAAAAATTAAGTCAGTGA-TTAAAAACCAATACTACAGTAATC-TCTCAA-TTATTTTCTCCAACATCAAATGCTGACCCAGAAAAACAAAA-AGTGAAAACTGGTGG----------TCTATATTACAAAACTGTC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9553823 135 + 11639508 TAAAGATTTTTGAAAAATTAAGTCAGTGA-TTAAAAACCAATACTACAGTAATC-TCTCAATTTATTTTCTCCAACATCAAATGCTGACCCAGAAAAACAAAA-AGTGAAAACTGGTGG----------TCTATATTACAAAACTGTC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405388 135 + 127223203 TAAAGATTTTTGAAAAATTAAGTCAGTGA-TTAAAAATCAATACTACAGTAATC-TCTCAATTTATTTTCTCCAACATCAAACGTTGACCCAGAAAAACAAAA-AGTGAAAACTGGTGG----------TCTATATTACAAAACTGTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1531701 135 - 2854183 TAAAGATTTTTGAAAAATTAAGTCAGTGA-TTAAAAACCAATACTACAGTAATC-TCTCAATTTATTTTCTCCAACATCAAATGCTGACCCAGAAAAACAAAA-AGTGAAAACTGGTGG----------TCTATATTACAAAACTGTC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20238261 135 + 27496150 TAAAGATTTTTGAAAAATTAAGTCAGTGA-TTAAAAATCAATACTACAGTAATC-TCTCAATTTATTTTCTCCAACATCAAATGCTGACCCAGAAAAACAAAA-AGTGAAAACTGGTGG----------TCTGTATTACAAAACTATC i colAng1.NW_012115154v1 C 0 I 13 s calJac3.chr8 33688997 136 - 128169293 AAAAGATTTTTGAAAAATTAAGTCAGTGC-TTAAAAATCAAGACTATAATAATC-TCTCAATTTATTTTCTCCAACATCAAATGCTGACCCAGGAAAAAAAATTAGTGAAAATTGCTGG----------TCTATGTTACAAAACTGTC i calJac3.chr8 C 0 I 4 s saiBol1.JH378140 17027453 136 + 19594188 AAGAGATTTTTGAAAAATTAAGTCAGTGA-TTAAAAATCAACACTACAGTAATC-TCTCAATTTATTTTCTCCAACATCAAATGCTGACCCAGGAAAAAAAAATAGTGAAAATTGCTGG----------TCTATGTTACAAAACTGTC i saiBol1.JH378140 C 0 I 4 s cebCap1.NW_016107335v1 4915071 134 - 11686629 AAAAGATTTTTGAAAAATTAAATCAGTTA-TTAAAAATCAAGACTACAATAATC-TCTCAATTTATTTTCTCCAACATCAAATGCTGACCCAGGAAAAAAAA--AGTGAAAATTGCTGG----------TCTATGTTACAAAACTGTC i cebCap1.NW_016107335v1 C 0 I 4 s aotNan1.NW_018506100v1 3264091 132 - 4527795 AAAAGATTTTTGAAAAATTA----AGTGA-TTAAAAATCAAGACTACAGTAATC-TCTCAATTTATTTTCTCCAACATCAAATGCTGACCCAGGAAAAAAAATTAGTGAAAATTGCTGG----------TCTATGTTACAAAACTGTC i aotNan1.NW_018506100v1 I 12 I 4 s otoGar3.GL873572 5480234 141 - 12253515 AAAAGATCTTTTA-----CAAGTCAGAAATTTAAAAATCAGGTCTATAGTAATCTTCTCAATTTTTTTCCCACAGTATCCCATGATGACCCTCCTAAGAAAA--AGTGAAAATTGGTGGTGTCTAAGTTTATATGTTACAAACAAGTC i otoGar3.GL873572 I 2 I 16 s canFam3.chr16 16050898 115 + 59632846 AAAGAATTTTTTA--AATTAAGTCAATTA-TT--AAATCAGGGCTA---TAATC-TA---------TTTTTCCAGCATCTAAA---GACACAGATGAGAGTA--AGTGAAAAGTTGTGG----------TATTTGCTACAAATTTATC i canFam3.chr16 I 1 I 1 s dasNov3.JH575209 1222050 125 + 1922530 aaaagatttttaaaataGTAAGTTAATGA-TT--AAATCAAGGTTTCTGTAATC-TCTTAATTT--TTCCCCCAGCAT------CTAACCAAAGGTGAGAATA-AGAGGAAGTCTGTGG----------TATTTCCTTCAAATTTGCC i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 84440 2517 + 204143 I a score=58218.000000 s hg38.chrUn_KI270746v1 50495 9 + 66486 AAATGAGGC s panTro5.chr2A 90609193 9 + 111504155 AAATGAGGT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961723 9 + 162613886 AAATGAGGT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834803 9 + 110113093 AAATGAGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451449 9 + 185818997 AAATGACTC i rheMac8.chr3 C 0 I 5 s macFas5.chr3 184941177 9 + 192294377 AAATGACTC i macFas5.chr3 C 0 I 5 s macNem1.NW_012015910v1 7909793 9 + 15219753 AAATGACTC i macNem1.NW_012015910v1 C 0 I 5 s cerAty1.NW_012008583v1 9553958 9 + 11639508 AAATGACTC i cerAty1.NW_012008583v1 C 0 I 5 s chlSab2.chr21 120405523 9 + 127223203 AAATGACTC i chlSab2.chr21 C 0 I 5 s manLeu1.NW_012102765v1 1531836 9 - 2854183 AAATGACTC i manLeu1.NW_012102765v1 C 0 I 5 s calJac3.chr8 33689137 9 - 128169293 AAATGACTC i calJac3.chr8 I 4 I 5 s saiBol1.JH378140 17027593 9 + 19594188 AAATGACTC i saiBol1.JH378140 I 4 I 5 s cebCap1.NW_016107335v1 4915209 9 - 11686629 AAATGACTC i cebCap1.NW_016107335v1 I 4 I 5 s aotNan1.NW_018506100v1 3264227 9 - 4527795 AAATGACTC i aotNan1.NW_018506100v1 I 4 I 5 s otoGar3.GL873572 5480391 6 - 12253515 AAACAA--- i otoGar3.GL873572 I 16 C 0 s canFam3.chr16 16051014 9 + 59632846 AAACATCTT i canFam3.chr16 I 1 I 19 s dasNov3.JH575209 1222175 9 + 1922530 AAACAAACC i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 84440 2517 + 204143 I e colAng1.NW_012115154v1 20238396 13 + 27496150 I a score=3703971.000000 s hg38.chrUn_KI270746v1 50504 391 + 66486 ------------------ATATTTATACTTCAATATCT-TGGATGATATCAGGGGGAGGTAGGGAGTTT------------------AAAAA-AATAGTTCTTCCAGTCATGAAAGAAAATAAAGTATAATCTAGAAT-TCC-TTAAAATCCTTCATTAGTCTAAATTAAACAGCCATATTCCAGA---ATATTAAATATAGAATATG-AAGAAAAACTGTCATCTCCAGTC-AATGAAGTTTTTTAACTTTT-GAG----TTAATACTTTTTCAAAGTAA--TTTTTTTCTCTCCGAAATGCATCACACTACTT---AACTCAC-----------TTCAAGGACTGGCAGAGCCATCAACCAATG--------------------------------TCATA-----GGGGAAAAAGCCTTGTC----ATTTTAAGG-TATTAA--ACAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTCCATGAGAACATAAT s panTro5.chr2A 90609202 392 + 111504155 ------------------ATATTTATACCTCAATATCT-TGGATGATATCAGGGGGAGGTAGGGAGGTT-----------------AAAAAA-AATAGTTCTTCCAGTCATGAAAGAAAATAAAGTATAATCTAGAAT-TCC-TTAAAATCCTTGATTAGTCTGAATTAAACAGCCATATTCCAGA---ATATTAAATATAGAATATG-AAGAAAAACAGTCATCTCCAGTC-AATGAAGTATTTTAACTTTT-GAG----TTAATACTTTTTCAAATTAA--TTTTTTTCTCTTCAAAATGCATCACACTACTT---AACTCAC-----------TTCAAGGACTGGCACAGCCATCAACCAATG--------------------------------TCATG-----GGGGAAAAAGCCTTGTC----ATTTTAAGG-TATTAA--ACAGACCATGAAATCTGCCACAATTTTGGTATTTCTTCTCCATAAGAACATAAT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155961732 393 + 162613886 ------------------ATATTTATACCTCAATATCT-TGGATGATATCAGGGGGAGGTAGAGAGGTT-----------------AAAAAACAATAGTTCTTCCAGTCATGAAAGAAAATAAAGTATAATCTAGAAT-TCC-TTAAAATCCTTGATTAGTCTAAATTAAACAGCCATATTCCAGA---ATATTAAATATAGAATATG-AAGAAAAACTGTCATCTCCAGTC-AATGAAGTATTTTAACTTTT-GAG----TTAATACTTTTTCAAATTAA--TTTTTTTCTCTTCAAAATGCATCACACTACTT---AACTCAC-----------TTCAAGGACTGGCAGAGCCATCAACCAATG--------------------------------TCATG-----GGGGAAAAAGCCTTGTC----ATTTTAAGG-TATTAA--CCAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTCCATGAGAACATAAT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102834812 395 + 110113093 ------------------ATATTTCTACCTCAATATCT-TGGATGATATCAGGGGGAGGTAGGGAGATT--------------AAAAAAAAA-AATAGTTCTTCCAGTCATGAAAGAAAATAAAGTATAATCTAGAAT-TCC-TTAAAATCCTTGATTAGTCTACATTAAACAGCCATATTCCAGA---ATATTAAATATAGAATATG-AAGAAAAACTGTCATCTCTAGTC-AATGAAGTATTTTAACTTTT-GAG----TTAATACTTTTTCAAATTAG--TTTTTTTCTCTTTAAAATGCATCACACTACTT---AACTCAC-----------TTCAAGGACTGGCAGAGCCATCAACCAATG--------------------------------TCATG-----GGGGAAAAAGCCTTATC----ATTTTAAGG-TATTAA--GCAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTCCATGAGAACATAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451463 405 + 185818997 ------------------ATATTTATACCTCAATATCT-TGGATGATATC-GGGGGAGGTAGGGAAGTTaaaaaaaaaaaaaaaaaaaaaag-aaTTGTTCTTCCAGTCATGAAAGAAATTAAAGTATAATCTAGAAT-TCC-TTAAAATCCTTGATGAGTCTAAATTAAACAGTCATATTCCAGA---ATATTAAATATGGAAGATG-AAGAAAAATTGTCACCTCTAGTC-AATGAGGTATTTTAACTTTT-GAG----TTAATACTTTTCCAAATTAA--TTTTTTTCTCTTCAAAATGCATCACACTACTT--------AC-----------TTCAAGGACTGACAGAGTCACCAACCAATG--------------------------------GCATG-----GGGGGAAAAGCCCTGTC----ACTTTAAGG-TATTAACCACAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTCCATGAGAACATAAT i rheMac8.chr3 I 5 C 0 s macFas5.chr3 184941191 405 + 192294377 ------------------ATATTTATACCTCAATATCT-TGGATGATATC-GGGGGAGGTAGGGAAGTTaaaaaaaaaaaaaaaaaaaaaag-aaTTGTTCTTCCAGTCATGAAAGAAAATAAAGTATAATCTAGAAT-TCC-TTAAAATCCTTGATGAGTCTCAATTAAACAGTCATATTACAGA---ATATTAAATATGGAAGATG-AAGAAAAATTGTCACCTCTAGTC-AATGAGGTATTTTAACTTTT-GAG----TTAATACTTTTCCAAATTAA--TTTTTTTCTCTTCAAAATGCATCACACTACTT--------AC-----------TTCAAGGACTGACAGAGTCACCAACCAATG--------------------------------GCATG-----GGGGGAAAAGCCCTGTC----ACTTTAAGG-TATTAACCACAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTCCATGAGAACATAAT i macFas5.chr3 I 5 C 0 s macNem1.NW_012015910v1 7909807 399 + 15219753 ------------------ATATTTATACCTCAATATCT-TGGATGATATC-GGGGGAGGTAGGGAAGTT------aaaaaaaaaaaaaaaag-aaTTGTTCTTCCAGTCATGAAAGAAAATAAAGTATAATCTAGAAT-TCC-TTAAAATCCTTGATGAGTCTAAATTAAACAGTCATATTCCAGA---ATATTAAATATGGAAGATG-AAGAAAAATTGTCACCTCTAGTC-AATGAGGTATTTTAACTTTT-GAG----TTAATACTTTTCCAAATTAA--TTTTTTTCTCTTCAAAATGCATCACACTACTT--------AC-----------TTCAAGGACTGACAGAGTCACCAACCAATG--------------------------------GCATG-----GGGGGAAAAGCCCTGTC----ACTTTAAGG-TATTAACCACAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTCCATGAGAACATAAT i macNem1.NW_012015910v1 I 5 C 0 s cerAty1.NW_012008583v1 9553972 399 + 11639508 ------------------ATATTTATACCTCAATATCT-TGGATGGTATC-AGGGGAGGTAGGGAAGTT-------aaaaaaaaaaaaaaaa-aTTTGTTCTTCCAGTCATGAAAGAAAATAAAGTATAATCTAGAAT-TCC-TTAAAATCCTTGATGAGTCTAAATTAAACAGCCATATTCCAGA---ATATTAAATACGGAAGAGG-AAGAAAAATTGTCACCTCTAGTT-AATGAGGTATTTTAACTTTT-GAG----TTAATACTTTTCCAAATTAA-TTTTTTTTCTCTTCAAAATGCATCACACTACTT--------AC-----------TTCAAGGACTGACAGAGTCACCAACCAATG--------------------------------GCATG-----GGGGGAAAAGCCCTGTC----ACTTTAAGG-TATTAACCACAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTCCATGAGAACATAAT i cerAty1.NW_012008583v1 I 5 C 0 s chlSab2.chr21 120405537 391 + 127223203 ------------------ATAGTTA-----AGATATCT-TGGATGATATC-GGGGGAGGTAGGGAGGTT----AAAAAAAAAAAAA-------AATTGTTCTTCCAGTCATGAAAGAAAATAAAGTATAATCTAGAAT-TCC-TTAAAATCTTTGATGAGTCTAAATTAAACAGCCATATTCCAGA---ATATTAAATATAGAAGATG-AAGAAAAATTGTCACCTCTAGTC-AATGAAGTATTTTAACTTTT-GAA----TTAATACTTCTCCAAATTAA-TTTTTTTTCTCTTCAAAATGCATCACACTACTT--------AC-----------TTCAAGGACTGACAGAGTCACCAACCAATG--------------------------------TCATG-----GGGGGAAAAGCCCTGTC----ACTTTAAGG-TATTAACCATAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTACATGAGAACATAAT i chlSab2.chr21 I 5 C 0 s manLeu1.NW_012102765v1 1531850 402 - 2854183 ------------------ATATTTATACCTCAATATCT-TGGATGATATC-GGGGGAGGTAGGGAAGTT----aaaaaaaaaaaaaaaaaag-aaTTGTTCTTCCAGTCATGAAAGAAAATAAAGTATAATCTAGAAT-TCC-TTAAAATCCTTGATGAGTCTAAATTAAACAGCCATATTCCAGA---ATATTAAATATGGAAGATG-AAGAAAAATTGTCACCTCTAGTC-AATGAGGTATTTTAACTTTT-GAG----TTAATACTTTTCCAAATTAA-TTTTTTTTCTCTTCAAAATGCATCACACTACTT--------AC-----------TTCAAGGACTGACAGAGTCACCAACCAATG--------------------------------GCATG-----GGGGGAAAAGCCCTGTC----ACTTTAAGG-TATTAACCACAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTCCATGAGAACATAAT i manLeu1.NW_012102765v1 I 5 C 0 s colAng1.NW_012115154v1 20238409 392 + 27496150 ------------------ATATTTATACCTCAATATCT-TGGATGATATC-GGGGGAGGTAGGGAGGTT--------------AAAAAAAAA-AATTGTTCTTCCAGTCATGAAAGAAAATAAAGTATAATCTAGAAT-TCC-TTAAAATCCTTGATGAGTCTAAATTAAACAGCCATATTCCAGA---ATATTAAACATAGAAGATG-AAGAAAAATTGTCACCTCTAGTC-AATGAAGTATTTTAACTTTT-GAG----TTAATACTTTTCCAAATTAA-CTTTTTTCCTCTTCAAAATGCATCACACTACTT--------AC-----------TTCAAGGACTGACAGAGTCATCAACCACTG--------------------------------TCATG-----GGTGGAAAAGCCTTGTC----ACTTTAAGG-TATTAACCACAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTCCATGAGAACATAAT i colAng1.NW_012115154v1 I 13 C 0 s calJac3.chr8 33689151 395 - 128169293 ------------------ATATTTATACCTCAATATCTTTAGATGATACCAGGGGGAGGTAGGGAGGTA--------------------AAA-AATTTTTCTTCCAGTCATGAAAGAAAATAAAGTGTTCTCTAGAAT-TCC-TTAAAATCCTTGATTAGTC-----TAAACAGCCATATTCCAGA---AGATTAAATATAGAAGATGAAAAAAAAACTGTCATCTCTAACC-AATAAAGCACTTTAACTTTT-GGG----TTAATACTTTTTCAAA-TAA--TCTTTTTCTCTTCAAAATGTATCATATTACTACCCAACTTAC-----------TTCAAGGACTAGCAAAGCCGTCAACCAATG--------------------------------TGATGGGGGAGGGGGGGAAGCCCTGTC----ATTTTAAGG-TATTAACCACAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTCCAAGAGAACATAAT i calJac3.chr8 I 5 C 0 s saiBol1.JH378140 17027607 398 + 19594188 ------------------ATATTTATACCTCAATATCTGTAGATGATACCAGGGGGAGGTAGGGAGGTA--------------------AAA-AATATTTCTTCCAGTCATGAAAGAAAATAAAGTGTTCTCTAGAAT-TCC-TTAAAATCCTT-ATTAGTC-----TAAACAGCCATATTCCAGA---ATATTAAATATAGAAGATG-AAGAAAAACTGTCATCTCTAACC-AATAAAGCATTTTAATTTTTGGGG----TTAATGCTTTTTCAAA-CAA--TTTTTTTCTCTTCAAAATGCATCACATTACTACCTAACTTAC-----------TTCAAGGACTAGCAGAGCCATCAACCAATG--------------------------------TCATGGGGGCGGGGGGAAAGCCCTGTCAAAAATTTTGAGG-TATTAACCACAGACAATGAAATCTGCCACAATTTTGGTATTTCTTCTCCATAAGAACATAAT i saiBol1.JH378140 I 5 C 0 s cebCap1.NW_016107335v1 4915223 384 - 11686629 ------------------ATATTTATACCTCAATATCTTTAGATGATACCAGGGGGAGGTAGGGAGGTA--------------------AAA-AATATTTCTGCCAGTCATGAAAGAAAATAAAGTGTTCTCTAGAAT-TCC-TTAAAATCCTTGATTAGTC-----TAAACAGCCATATTCCAGA---ATATTAAATATAGAAGATG-AAGAAAAACTGTCATCTCTAACC-AATAAAGCATTTTAATTTTG-GGG----ATAATGCTTTTTCAAA-TAA--TTTTTTTCTCTTCAAAATGCATCACATTACTACCTA----AC-----------TTCAAGGACTAGCAGAGCCATCAACCAATG--------------------------------TCAT------TGGGGGAAAGCCTTGTC----ATTTTAAGG-TATTAACCACAGACAATGAAATCCGCCACAATTTTGGTATTTCTTCTCCATAAGAATATAAT i cebCap1.NW_016107335v1 I 5 C 0 s aotNan1.NW_018506100v1 3264241 384 - 4527795 ------------------ATATTTATACCTCAATATCTTTAGATGATACCAGGGGGAGGTAGGGAGGTA--------------------AAA-AATATTTCTTCCAGCCATGAAAGAAAATAAAGTGTTCTCTAGAAT-TCC-TTAAAATCCTTGAT----------TAAACAGCCATATTCCAGA---ATATTAAATATAGAAGATG-AAGAAAAACTGTCATCTCTAACC-AATAAAGCATTTTAACTTTT-GGG----TTAATACTTTTTCAAG-TAA--TTTTTTTCTCTTCAAAATGCATCACATTACTACCTAACTTAC-----------TTCAAGGACTAGCAGAGCCATCAGTCAATG--------------------------------TCATG-----GGGGGAAAAGCCCTGTC----ATTTTAAGG-TATTTACCACAGACAATGAAATCTACCACAATTTTGGTATTTCTTCTCCATGAGAACATAAT i aotNan1.NW_018506100v1 I 5 C 0 s otoGar3.GL873572 5480397 350 - 12253515 ------------------ATATTTATACCTAAACACTT-TGGA---TATC--AGGGTGATAGAAAAGTT--------------------AAG-----------------------------AAATTGCAATGTGGAAC-TCT-TTCAA-------ATTAGTCTAAATTAAACATCCATATTCTGGATTTATAGTAAATGTAGAAGATG-AAGAAAAATTGTCTTCACTAGTCAAATGAAGTATTTTAGCTTTG-GAA----ATAATACTTTTAAAAATTAA-----TTTTCTCTTCAAAATGCATCAAACTACTT---AACTTAC-----------TTCAAGGACTAGCACAGTCATCAACCAATG--------------------------------ACAT------GGGAAAATGGCCCTATA----ATTTTAAGG-TATTAA-CAGAGACCATGAAATCTGCCACAATTCTAGTATTTTTTCCCCATTAGAACATAAT i otoGar3.GL873572 C 0 I 247 s canFam3.chr16 16051042 396 + 59632846 ------------------GTCTCTAT-TTTCAACACCT-TGCATGATATCAG--------AGTGAACTG--------------------AAA-AATAGTTCTAATAGTGAT-AGAAATAAGAAAGTAGAATCTAGAAC-TCCTTTGAAACCCTTGATAAGTCTAAAATAAACAGCCTTATTTCAAAATCATATTAAATATAGAAGAGG-AAG-AAAATTCTCTTCTCTAGGT-AGTCAAATATTTTAACTTTT-CAGATGATTAATACTTTT-CACATTAA--TTTTCTACCCTCTAAAATGCATCAGACTACAT---AACTCACTGAGTTATGTATTCAAGAACTAGCAGAATCCTCCATCAATG--------------------------------ACATGA----GAGAGAGAGGCCCTATA----ATTGTGAGGTTATTAA-CACGGGCATTGAAATCTG---CGATTCTGGTATTTCTTCTTCATTAGCATATAAT i canFam3.chr16 I 19 C 0 s dasNov3.JH575209 1222184 430 + 1922530 ATCTTTTATACTCTTAAAACATTTATGCTTCAACACCT-TGAATGTTAGCTGAGTGAGTTGAAAAAGTT------------------GACAG-AAT--------------------ATAAGAAAGTGGATTCTAAAACAGCT-TTGGAACCACTGATAAATCTGAATTAAACAGCCTTATTCCAGCATTATATTAAATCTAAAATATG-AAGAAAAATTGTCTTCTCTATTC-AATAAAGGATTTTCAGTTTT-GAGATGATTAACACTTTT-CAAATTAATTTTTTTTTTTCTTCAAAACTCATCAGACAACTT---AACATAC-----------TTCAAGGACTAGCAG-TTTATCCATGAGTGAAACCCAGAATGGGCAAAATTTTCACAGGTCAGCATG-----GAAAAGAAGCTCCTAAA----ATTTTGAGG-TTGTAA-CACTAACAGTGAAATCTGCTGCAATTCTGACATTTCTTCTCCATTAGTACACAGC i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 84440 2517 + 204143 I a score=67073.000000 s hg38.chrUn_KI270746v1 50895 14 + 66486 AAATTAATGGAGTT- s panTro5.chr2A 90609594 14 + 111504155 AAATTAATGGAGTT- i panTro5.chr2A C 0 C 0 s panPan2.chr7 155962125 14 + 162613886 AAATTAATGGAGCT- i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102835207 14 + 110113093 AAATTAATGGAGTT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451868 13 + 185818997 AAATTAATGGAG-T- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184941596 13 + 192294377 AAATTAATGGAG-T- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7910206 13 + 15219753 AAATTAATGGAG-T- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9554371 13 + 11639508 AAATTAATGGAG-T- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405928 13 + 127223203 AAATTAATGGAG-T- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1532252 13 - 2854183 AAATTAATGGAG-T- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20238801 13 + 27496150 AAAATAATGGAG-T- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33689546 13 - 128169293 AAATTAACGAAG-T- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17028005 1 + 19594188 A-------------- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4915607 13 - 11686629 AAATTAACGAAA-T- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3264625 13 - 4527795 AAATTAACAAAG-T- i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16051438 12 + 59632846 -AGATTATGTAG-T- i canFam3.chr16 C 0 I 1 s dasNov3.JH575209 1222614 14 + 1922530 AGATTGATGTAG-TT i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 84440 2517 + 204143 I e otoGar3.GL873572 5480747 247 - 12253515 I a score=7453064.000000 s hg38.chrUn_KI270746v1 50909 624 + 66486 TTTTCTTTTGCTTTTTTCTAAGCAACAAAGTTTTATGA-TATCATGAATGAAAAGATCCTTAATTACCTTTTGTTCTACACGTCAAGGACTT--CTCCCTCATAAAACCAGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATTAAAAATGTATACTT---------------------------------------------GATTTTTAAATGCAAGCATATTATTTCTTTACATTAAAATTTTTAGATTTAA-AAAGCGTTTCTGGAAACT-------CAA-------TCTAGAAAAGAAAGACTTAATTCTTA--ACATCCAGTAGGGCAAAACAAATCAG--ACCGAAATGATATATGAATGTAAATGTAATTTTA-TGTACCACTTTGATGCTCCAAATTGCACTGCTAGGAAG-TGCCTGGGTTTAAAAATTTCCCGACCTCCTGAAATGTCTGGGGACCAGGAGGGTGGGCTCACTGTATTATGGGTACTCCAAGCCTCCTA-AGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGGACAGCAAAAACAAATGCAAACGTATGGAAATTTAGGACAAATTGCTTCAAGGAAGGCAAAATAAGCTAATCACTAACAGTGATTTAAACATTTAAC s panTro5.chr2A 90609608 625 + 111504155 TTTTCTTTTGCTTTTTTCTAAGCAACAAAGTTTTATGA-TATCATGAATGAAAAGGTCCTTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCCTCATAAAACCGGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATTAAAAATGTATACTT---------------------------------------------GATTTTTAAATGCAAGCATATTATTTCTTTACATTAAAATTTTTAGATTTAA-AAAGTGTTTCTGGAAGCT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTT--ACACCCAGTAGGGCAAAACAAATCAG--ACAGAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTCCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCTCCTA-GGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGCAAACATATGGAAATTTAGGACAAATTGCTTCAAGGAAGGCAAAATAAGCTAATCACTAACAGTGATTTAAACATTTAAG i panTro5.chr2A C 0 C 0 s panPan2.chr7 155962139 626 + 162613886 TTTTCTTTTGCTTTTTTCTAAGCAACAAGGTTTTATGA-TATCATGAATGAAAAGGTCCTTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCCTCATAAAAACAGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATTAAAAATGTATACTT---------------------------------------------GATTTTTAAATGCAAGCATATTATTTCTTTACATTAAAATTTTTAGATTTAA-AAAGTGTTTCTGGAAGCT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTA--ACACCCAGTAGGGCAAAACAAATCAG--ACAGAAATGATATATGAATGTAAATGCAATTTTATTTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGATGCGTAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGCAAACGTATGGAAATTTAGGACAAATTGCTTCAAGGAAGGCAAAATCAGCTACTCACTAACAGTGATTTAAACATTTAAG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102835221 625 + 110113093 TTTTCTTTTGCTCTTTTCTAAGCAACAAAGTTTGATGA-TACCATGAATGAAAAGGTCCCTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCCTCACAAAAACAGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATTAAAAATGTATACTT---------------------------------------------GATTTTTAAATGCAAGCATATTATTTCTTTACATTAAAATTTTTACATTTAA-AAAGTGTCTCTGGAAGCT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTA--ACATCCAGTAGGGCAAAACAAATCAG--ACAGAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGCAAACGTATGGAAATTTAGGACAAATTGCTTCAAGGAAGGCAAAATAAGCTAATCACTAACAGTGATTTAAACATTTAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178451881 620 + 185818997 TTTTCTTTTGCTTTTTTCTAAGCAACAAAGTTTTATGA-TATCGTGAATGAAAATGTCCGTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCCTCATAAAAACAGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATTAAAAATGTGTACTT---------------------------------------------GATTTTTAAAT----GCATATTATTTCTTTACATTAAAATTTTTAGATTTAA-AAAGTGTCTCTGGAAGCT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTA--ACATCCAGTAGGGCAAAAC-AATCAG--ACAGAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAACAGATGTGTAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGCAAACGTATGGAAATTTAGGACAAGTTGCTTCAAGGAAGGCAAAATAAGCTTATCACTAACAGTGACTTAAACATTTAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184941609 620 + 192294377 TTTTCTTTTGCTTTTTTCTAAGCAACAAAGTTTTATGA-TATCGTGAATGAAAATGTCCGTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCCTCATAAAAACAGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATTAAAAATGTGTACTT---------------------------------------------GATTTTTAAAT----GCATATTATTTCTTTACATTAAAATTTTTAGATTTAA-AAAGTGTCTCTGGAAGCT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTA--ACATCCAGTAGGGCAAAAC-AATCAG--ACAGAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGCAAACGTATGGAAATTTAGGACAAGTTGCTTCAAGGAAGGCAAAATAAGCTTATCACTAACAGTGACTTAAACATTTAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7910219 620 + 15219753 TTTTCTTTTGCTTTTTTCTAAGCAACAAAGTTTTATGA-TATCGTGAATGAAAATGTCCTTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCCTCATAAAAACAGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATTAAAAATGTGTACTT---------------------------------------------GATTTTTAAAT----GCATATTATTTCTTTACATTAAAATTTTTAGATTTAA-AAAGTGTCTCTGGAAGCT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTA--ACATCCAGTAGGGCAAAAC-AATCAG--ACAGAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGCAAACGTATGGAAATTTAGGACAAGTTGCTTCAAGGAAGGCAAAATAAGCTTATCACTAACAGTGACTTAAACATTTAAG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9554384 620 + 11639508 TTTTCTTTTGCTTTTTTCTAAGCAACAAAGTTTTATGA-TATCGTGAATGAAAATGTCCGTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCCTCATAAAAACAGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATTAAAAATGTATACTT---------------------------------------------GATTTTTAAAT----GCATATTATTTCTTTACATTAAAATTTTTAGATTTAA-AAAGTGTCTCTGGAAGCT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTA--ACATCCAGTAGGGCAAAAC-AATCAG--ACACAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGCAAACGTATGGAAATTTAGGACAAGTTGCTTCAAGGAAGGCAAAATAAGCTTATCACTAACAGTGACTTAAACATTTAAG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120405941 620 + 127223203 TTTTCTTTTGCTTTTTTCTAAGCAACAAAGTTTTATGA-TATCGTGAATGAAAATGTCCGTAATTACCTTTTGGTCTACATGTCAAGGACTC--CTCCCTCATAAAAACAGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATTAAAAATGTATACTT---------------------------------------------GATTTTCAAAT----GCATATTATTTCTTTACATTAAAATTTTTAGATTTAA-AAAGTGTCTCTGGAAGCT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTA--ACATCCAGTAGGGCAAAAC-AATCAG--ACAGAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGCAAACGTATGGAAATTTAGGACAAATTGCTTCAAGGAAGGCAAAATAAGCTTATCACTAACAGTGACTTCAACATTTAAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1532265 620 - 2854183 TTTTCTTTTGCTTTTTTCTAAGCAACAAAGTTTTATGA-TATCGTGAATGAAAATGTCCGTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCCTCATAAAAACAGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATTAAAAACGTATACTT---------------------------------------------GATTTTTAAAT----GCATATTATTTCTTTACATTAAAATTTTTAGATTTAA-AAAGTGTCTCTGGAAGCT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTA--ACATCCAGTAGGGCAAAAC-AATCAG--ACAGAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGCAAACGTATGGAAATTTAGGACAAGTTGCTTCAAGGAAGGCAAAATAAGCTTATCACTAACAGTGACTTAAACATTTAAG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20238814 620 + 27496150 TTTTCTTTTGCTTTTTTCTAAGCAACAATGTTTTATGA-TATCGTGAATGAAAATGTCCTTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCCTCATAAAAACAGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATTAAAAATGTATACTT---------------------------------------------GATTTTTAAAT----GCATATTATTTCTTTACATTAAAATTTTTAGATTTAA-AAAGTGTCTCTAGAAGCT-------CAA-------TCTAGAAAAGACAGATTTAATTCTTA--ACATCCAGTAGGGCAAAAC-AATCAG--ACAGAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGCAAACGTATGGAAATTTAGGACAAATTGCTTCAAGGAAGGCAAAACAAGCTTATCACTAACAGTGACTTAAACATTTAAG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33689559 622 - 128169293 TTTTCTTTCGCTCTTTTCTAAGCAACAAAGTTTTATGA-CATCATGAATGAAAAGGTCCTTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTTCCTCATAAAAACAGCAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGG-TATT-AAAACGTGTACTT---------------------------------------------GATTTTTAAATGCAAGCATATTGTTTCTTTACATTAAAAGTTTTAGATTTTA-CAAGTGTCTCTGAAAGCT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTA--ACATCCAGTAGGGCAAAACAAATCAG--AAAGAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAAGTCAAAGCCAGCAACTAAGGAATTTTAGAATAGCAAAAACAAATGTAAAAGTATGGAAATTTAGGACAAATTGCTTCAAGGAAGGCAAAATAACCTTATCACTAACAGTGACTTAAACATTTA-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17028006 564 + 19594188 -------------------------------------------------------------AATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCCTCATAAAAACAGTAGTAATCACA--ACA-AAAGGAATTAACCACAGAAAGAGG-TATT-AAAATGTATACTT---------------------------------------------GATTTTTAAATGCAAGCATATTGTTTCTTTACATTAAAAGTTTTAGATTTAA-AAAGTGTCTCTGGAAGCT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTA--ATATCCAATAGGGCAAAACCAATCAG--AAAGAACTGATATATGAATGTAAATGCGATTGTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGGTGTGTAAAACTCAGCAACATAAAAAGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGTAAAAGTATGGAAATTTAGGACAAATTGCTTCAAGGAAGGCAAAATAACCTTATTACTAACAGTGATTTAAACATTTAAG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4915620 626 - 11686629 TTTTCTTTCGCTCTTTTCTAAGCAACAAAGTTTTATGA-CATCATGAATGAAAAGGTCCTTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCGTCATAAAAACAGTAGTAATCACAACACA-AAAGGAATTAACCATAAAAAGAGG-TATT-AAAATGTATACTT---------------------------------------------GATTTTTAAATGGAAGCATATTGTTTCTTTATATTAAAAGTTTTAGATTTAA-AAAGTGTCTCTGGAAACT-------CAA-------TCTAGAAAAGAAAGATTTAATTCTTA--ACATCCAGTAAGGCAAAACAAATCAG--AAAGAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAAGTCAAAGCCAGCAACTTAGGAATTTTAGAACAGCAAAAACAAATGTAAAAGTATGGAAATTTAGGACAAATTGCTTCAAGGAAGGCAAAATAACTTTATCACTAACAGTGACTTAAACATTTAAG i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3264638 624 - 4527795 TTTTCTTTCACTCTTTTCTAAGCAACAAAGTTTTATGA-CATCATGAATGAAAAGGTCCTTAATTACCTTTTGGTCTACATGTCAAGGACTT--CTCCCTCATAAAAACAGTAGTAATCACA--ACA-AAAGGAATTAACCATAAAAAGAGGTTATT-AAAATGTATACTC---------------------------------------------GATTTTTAAATGCAAGCATATTGTTTCTTTACATTAAAAGTTTTAGATTTAA-AAAGTGTCTCTGGAAGCT-------CAA--------CTAGAAAAGAAAGATTTAATTCTTA--ACATCCAGTAGGGCAAAACAAATCAG--AAAGAAATGATATATGAATGTAAATGTAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGTTGAGAAAATAGATGTGTAAAACTCAGCAACATAAAAAGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGTAAAAGTATGGAAATTTAGGACAAATTGCTTCAAGGAAGGCAAAATAATCTTACCACTAACAGTGACTTAAACATTTAAG i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5480994 635 - 12253515 TTTTCTTTTGTCTTTTTCGAGGCAACGAAATTTAATGG-TATCATGAATGAAAAAGTCCTTAATTACCTTTTGTTCTACAGG-----------------TCATAAAAGTGCTGGTAATTACA--ACA-AAAAGAA-TACCCATAAAAAA----GATTAAAAATTTTCACTT------------GTAAACCTAAAGTTTAACTTCCTCCTAAATCCAGCTTTTTAAATTCAAGCATATTA-----TTATGTTAAAATTTTTAGATTTAAGAAAGTGACTCTAGGAACT-------GAA-------TCTAGAAAAGAAACGTTTAATTCTTA--TCATCCAGTAGAACAAAACAAACCAG--TAAGAAATGACATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGATTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTGCTCCAAGCCCCCTAGGGATATGGCAGGTGAGAAAATAGATGTATAAAACTCAGCAACAGAAAAGGTCAAAGCCAGCAACTAAAGAGTTTTAGAACAGCAAAAACAAATGCAAATGTATGGAAATTTAGGACAAATTGCTTCAAAATAGAGAAAATAAGCGTATTACTTAGAATGA-TTAAATATGTAAC i otoGar3.GL873572 I 247 C 0 s canFam3.chr16 16051451 661 + 59632846 --TTCTTTTGTTCTTTTCTAAGCAACAAAATTTTATGATTATCAAGAATGAGCAAGTCCTAAAATACTTTATAGCCTATGCAACAAGGG-TT--TTCCTCCATAGAAACGC---TAATTACA--ACATAAAAGAA--AACCATAAAAAGAAGTTACTAAAAATTCACTCTTAAAATCAGTCATGTAAAATTGCAATTTAATTTCCTCCTAATCCA-GATTTTTAAGTGCAAGCATGTTGATTCTTCATACtaaaatttttatattaaa-aaaGTGGCTCTGGAATCTGCACTACTTA-------TCTAGAAAAGAATGGTTCAATTCTTAACACATCTACTCGGACAAAACCAACCAG--AAAGAAATGATATATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGGTGAGAAAATAGATGTATAAAACTCGGCAACGTAAAAGGTCAAAGCCAGCAACTGAGGAATTTCAGAACAGC-AAAACAAATGCAGACGTATGGAAATTTAGGACAAATTGCTTCAAGGTAGGGAAAATAAGCTTTACACTTACAATGATTT----------- i canFam3.chr16 I 1 C 0 s dasNov3.JH575209 1222628 676 + 1922530 TTTTCTTTTGTTCTTTTCTAACCAA-----TTTTATAA-CAGCATGAATGGGCAGGTCCATAATTTCCTTATGGCCTATGTAATAGCGATTTTCCTCCTTTATAAAAATACTGGTAATTACAAGATA-AATGGAAGCAACCACAAAAAGAGG-CATTTAAAATTTACACTTAAAACCAGTCAAGTAAAATTGCTATTTAATATCCTACTAATCCA-GATTTTAAAGTGAAAACATGCTCCTTCTTTACATGAAAATTTTTAGATTAAA-AAAGTGACTCTGAAAGCT-------CAATTATTTATCTGGAAAAGAAAGGTTTAATTCTTA--ACTCCTACCAGGATAACACAAACCAGAAAAAAAAATGATACATGAATGTAAATGCAATTTTA-TTTACCACTTTGATGCTCCAAATGGCACTGCCAGGAAGCTGCCTGGGTTTAAAAATTTCCCGACCTTCTGAAATGTCTGGGGACCAGGAAGGTGGGCTCACTGTATTATGGGTACTCCAAGCCCCCTA-GGATATGGCAGGTGAGAAAATAGATGTATAAAACTCAGCAACATAAAAGGTCAAAGCCAGCAACTAAGGAATTTTAGAACAGCAAAAACAAATGTAGACGTATGGAAATTTAGGACAAATTGCTTCAAGGTTGGTAAAACAAGCTTATCACTTACAGTGACTTTATTCTTAAC- i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 84440 2517 + 204143 I a score=13923.000000 s hg38.chrUn_KI270746v1 51533 1 + 66486 T s panTro5.chr2A 90610233 1 + 111504155 T i panTro5.chr2A C 0 C 0 s panPan2.chr7 155962765 1 + 162613886 T i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102835846 1 + 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178452501 1 + 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184942229 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7910839 1 + 15219753 T i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9555004 1 + 11639508 T i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120406561 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1532885 1 - 2854183 T i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20239434 1 + 27496150 T i colAng1.NW_012115154v1 C 0 C 0 s saiBol1.JH378140 17028570 1 + 19594188 T i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4916246 1 - 11686629 T i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3265262 1 - 4527795 T i aotNan1.NW_018506100v1 C 0 C 0 s eulMac1.LGHX01002433v1 85682 1 - 871265 T i eulMac1.LGHX01002433v1 N 0 I 368 s otoGar3.GL873572 5481629 1 - 12253515 T i otoGar3.GL873572 C 0 I 12 s canFam3.chr16 16052112 1 + 59632846 T i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1223304 1 + 1922530 T i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 84440 2517 + 204143 I e calJac3.chr8 33690181 0 - 128169293 C a score=3699911.000000 s hg38.chrUn_KI270746v1 51534 349 + 66486 ATAAC--AA--ATAACTTAAATG-TTTGCTGCTACA----------------------------GAGACATCATTACAATGAAAC--ATTAAAAATTAGGGTTTAT-ATGACATCAACTTTGACTCATGAACTGCAATTACTGCACCAAAAAGT-AAATAAACGTCAATCACACTTTAAGAATTAACACT----AGAAGAAAGTATTGGGGGGTTATTTTTCTTCTAACAACTATCACTCTACTT-AAAA--GGAGAAATGGATAACCACAAGGAATTCTATAT---TCTATAGCTATAAACAACAAAAAC----CAGTAGGCCAAAGAATGCAATGAGAAACATAAGCAATCGATAAATGCATACACTT--TTAACTGTAGAGAGCTGG----TAACATTAAAAT s panTro5.chr2A 90610234 349 + 111504155 ATAAC--AA--ATAACTTAAATG-TTTGCTGCTACA----------------------------GAGACATCACTACAATGAAAC--ATTAAAAATTAAGGTTTAT-ATGACATCAACATTGACTCATGAACTGCAATTACTGCACCAAAAAGT-AAATAAAAGTCAATCACACTTTAAGAATTAACACT----AGAAGAAAGTATTGGGGGGTTATTTTACTTCTAACAACTATCACTCTACTT-AAAA--GGAGAAATGGATAACCATAAGGAATTCTATAT---TCTATAGCTATAAACAACCAAAAC----CAGTAGGCCAAAGAATGCAATGAGAAACATAAGCAATCGATAAATGCATAAACTT--TACACCGTAGAGAGCTGG----TAACATTAAAAT i panTro5.chr2A C 0 C 0 s panPan2.chr7 155962766 371 + 162613886 --------T--ATAACTTAAATGTTTTGCTGCTACAATTTACATTAAATATTTTAATTCTGCCTGAGACATCACTACAATGAAAC--ATT-AAAATTAAGGTTTAT-AGGACATCAACATTGACTCATGAACTGCAATTACTGCACCAGAAAGT-AAATAAAAGTCAATCACACTTTAAGAATTAACACT----AGAAGAAAGTATTGGGGGGTTATTTTTCTTCTAACAACTATCACTCTACTT-AAAA--GGAGAAATGGATAACCATAAGGAATTCTATAT---TCTATAGCTATCAACAACCAAAAC----CAGTAGGCCAAAGAATGCAAGGAGAAACATAAGCAATCGATAAATGCATACACGT--TAAAGTGTAGAGAGCTGG----TAACATTAAAAT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102835847 374 + 110113093 ATAACTTAA--ATAACTTAAATG-TTTGCTGCCACAATTTACATTAAATATTTT-ACTCTGCCTGGGACATCACTACAATGAAAC--ATTAAAAATTGAGGTTTAT-ATGACATCAACATTGACTCATGAACTGCAATTACTGCACCAAAAAGT-AAATAAAAGTCAATCACACTTTAAG----AACACT----AGAAGAAGGTATTGGGGGATTGCTTTTCTTCTAACAACTAACACTCTACTT-AGAA--GGAGAAATGGATAACTATAAGGAATTCTATAT---TCTATAGCTATAAACAACCAAATC----CAGTAGGCCAAAGAATGCAATGAGAAATATAAGCAATCGATAAGTGCATAAACTT--TAAACTGTGGAGAGTTGG----TAACATTAAAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178452502 378 + 185818997 ATAACTTAA--ATAACTTAAATG-TTTGCGGCTACAATTTACATTAAATATTTA-ATTCTGGCTGAGACATCACTACAATGAAAC--ATTAAAAATTAAGGTTTAT-ATGACATCAACATTGACTCATGAACTGCAATTACTGCACCAAAAAGT-AAATAAAGGTCAATCACACTTTAAGGATTAACACT----AGAAGAAAGTACTGGGGGATTATTTTTCTTCTAACAACTATCATTCTACTT-AAAA--GGAGAAATGGATAACCATAAGGAATTCTATAT---TCTATAGCTATAAACGACCAAAAC----CAGTAGGCCAAAGAATGAGATGAGAAACATAAGCAATCGATAAATGCATAAACTT--TAAACTGTGGAGAGCTGG----TAACATTAAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184942230 378 + 192294377 ATAACTTAA--ATAACTTAAATG-TTTGCTGCTACAATTTACATTAAATATTTA-ATTCTGGCTGAGACATCACTACAATGAAAC--ATTAAAAATTAAGGTTTAT-ATGACATCAACATTGACTCATGAACTGCAATTACAGCACCAAAAAGT-AAATAAAGGTCAATCACACTTTAAGGATTAACACT----AGAAGAAAGTACTGGGGGATTATTTTTCTTCTAACAACTATCATTCTACTT-AAAA--GGAGAAATGGATAACCATAAGGAATTCTATAT---TCTATAGCTATAAACGACCAAAAC----CAGTAGGCCAAAGAATGAGATGAGAAACATAAGCAATCGATAAATGCATAAACTT--TAAACTGTGGAGAGTTGG----TAACATTAAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7910840 378 + 15219753 ATAACTTAA--ATAACTTAAATG-TTTGCTGCTACAATTTACATTAAATATTTA-ATTCTGGCTGAGACATCACTACAATGAAAC--ATTAAAAATTAAGGTTTAT-ATGACATCAACATTGACTCATGAACTGCAATTACCGCACCAAAAAGT-AAATAAAGGTCAATCACACTTTAAGGATTAACACT----AGAAGAAAGTACTGGGGGATTATTTTTCTTCTAACAACTATCATTCTGCTT-AAAA--GGAGAAATGGATAACCATAAGGAATTCTATAT---TCTATAGCTATAAACGACCAAAAC----CAGTAGGCCAAAGAATGAGATGAGAAACATAAGCAATCGATAAATGCATAAACTT--TAAACTGTGGAGAGTTGG----TAACATTAAAAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9555005 378 + 11639508 ATAACTTAA--ATAACTTAAATG-TTTGCTGCTACAATTTACATTAAATATTTA-ATTCTGGCTGAGACATCACTACAATGAAAC--ATTAAAAATTAAGGTTTAT-ATGACATCAACATTGACTCATGAACTGCAATTACCGCACCAAAACGT-AAATAAAGGTCAATCACACTTTAAGGATTAACACT----AGAAGAAAGTACTGGGGGATTATTTTTCTTCTAACAACTATCATTCTACTT-AAAA--GGAGAAATGGATAACCATAAGGAATTCTATAT---TCTATAGCTATAAACGACCAAAAC----CAGTAGGCCAAAGAATGTGATGAGAAACATAAGCAATCGATAAATGCATAAACTT--TAAACTGTGGAGAGTTGG----TAACATTAAAAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120406562 378 + 127223203 ATAACTTAA--ATAACTTAAATG-TTTGCTGCTACAATTTACATTAAATATTTT-ATTCTGGCTGAGACATCACTACAATGAAAC--ATTAAAAATTAAGGTTTAT-ATGACATCAACATTGACTCATGAACTGCAATTACCGCACCAAAAAGT-AAATAAAGGTCAATCACACTTTAAGGATTAACACT----AGAAGAAAGTACTGGGGGATTATTTTTCTTCTAACAACTATCATTCTACTT-AAAA--GGAGAAATGGATAACCATAAGGAATTCTACAT---TCTATAGCAATAAATGACCAAAAC----CAGTAGGCCAAAGAATGCGATGAGAAACATAAGCAATCAATAAATGCATAAACTT--TAAACTGTGGAGAGTTGG----TAACATTAAAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1532886 378 - 2854183 ATAACTTAA--ATAACTTAAATG-TTTGCTGCTACAATTTACATTAAATATTTA-ATTCTGGCTGAGACATCACTACAATGAAAC--ATTAAAAATTAAGGTTTAT-ATGACATCAACATTGACTCATGAACTGCAATTACCACACCAAAAAGT-AAATAAAGGTCAATCACACTTTAAGGATTAACACT----AGAAGAAAGTACTGGGGGATTATTTTTCTTCTAACAACTATCATTCTACTT-AAAA--GGAGAAATGGATAACCATAAGGAATTCTATAT---TCTATAGCTATGAACGACCAAAAC----CAGTAGGCCAAAGAATGTGATGAGAAACATAAGCAATCGATAAATGCATAAACTT--TAAACTGTGGAGAGTTGG----TAACATTAAAAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20239435 379 + 27496150 ATAACTTAA--ATAACTTAAATG-TTTGCTGCTACAATTTACATTAAATATTTT-ATTCTGGCTGAGACATCACTAAAATGAAAC--ATTAAAAATTAAGGTTTAT-ATGACATCAACATTGACTCATGAACTGCAATTACTGCACCAAAAAGTAAAATAAAGGTCAATCACACTTTAAGAATTAACACT----AGAAGAAAGTACTGGGGGATTATTTTTCTTCTAACAACTATCATTCTACTT-AAAA--GGAGAAATGGATAACCATAAGGAATTCTATAT---TCTATAGCTATAAACAACCAAAAC----CAGTAGTCCAAAGAACGTGATGAGAAATATAAGCAATCGATAAATGCATAAACTT--TAAACTGTGGAGAGTTGG----TAACATTAAAAT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33690181 362 - 128169293 ------------------AAACG-TTTGCTGCTACAATTTACATTAAAT------ATTCCAGCTGAGACATCATTACAATGAAAC--ATTAAAAATTAAGATTTCT-ATGACATCAACATTGACTCATGAACTGCAATTACTGCACCAAATAGT-AAATAAAAGTCAATCACACTTTAAGAATCAACACT----AGAAGAAAGTATTAAGGGATTATTTTTCTTCTAACAACTATCGCTCTACTTAAAAA--AAAAAAATGGATAACAATAAGGTATTCTATGT---ACTATAACTATAAACAACCAAAAC----CAGTAGGCCAAAGAATGCAATGAGAAACATAAGCAATTGATAAATGCATAAACTT--TAAACTGTGGAGAGTCGGTTTGTTACATTAAAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17028571 378 + 19594188 ATAACTTAA--ATAACTTAAATG-TTTGCTACTACAATTTACATTAAAT------ATTCCGGCTGAGACATCTCTACAATGAAAC--ACTAAAAATTAAGGTTTAT-ATGACATCAACATTGACTCATGAACTGCAATTCCTGCACCAAATAGT-AAATAAAAGTCAATCACACTTTAAGAATCAACACT----AGAAGAAAGTATTAAGAGATTACTTTTCTTCTAACAACTATTGCTCTACTT-AAAA--GCAAAAATGGGTAACCATAAGGTATTCTATGT---ACTATAGCTATAAACAACCAAAAC----CAGTAGGCCAAAGAATGCAATGAGAAACATAAGCAACTGAT-AATGCATAAACTTTATAAACTGTGGAGAGCTGGCTTGTAACGTTAAAAT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4916247 362 - 11686629 ATAACTTAA--ATAACTTAAATG-TTTGCTACTACAATTTACATTAAAT------ATTCCGGCTGAGACATCACTACAATGAAAC--ATTAAAAATTAAGGTTTAT-ATGACATCAACATTGACTCATGAACTGCAATTACTGCACCAAATAGT-AAATAAAAGTCAATC---------------ACACC----AGAAGAAAGTATTAAGAGATTATTTTTCTTCTAACAACTATCACTCTACTT-AAAA--GGAAAAATGGATAACCGTAAGGTATTCTATGT---ACTATAGCTATAAACAACCAAAAC----CAGTAGGCCAAAGAATGCAATGAGAAACATAAACAATTGATAAATGCATAAACTT--TAAACTGTGGAGAGTTGGTTTGTAATGTTAAAAT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3265263 380 - 4527795 GTAACTTAA--ATAACTTAAATG-TCTGCTACTATGATTTACATTAAAT------ATTCTGGCTGAGGTATCACTACAATAAAAC--ATTAAAAATTAAGGTTTAT-ATGACATCAACATTGACTCATGAACTGTAATTACTGCACCAAATAGT-AAATAAAAGTCAATCACACTTTGAGAATCAACACT----AGAAGAAAGTATTAAGGGATTATTTTTCTTCTAACAACTATCACTCTACTT-AAAA--GGAAAAATGGATAACCATAAGGTATTCTATGT---ACTATAGCTATAAACAACCAAAAAGGAGCAGTAGGCCAAAGAATGCAATGAGAAACGTAAGCAATTGAT-AATGCATAAACTT--TAAACTGTGGAGAGTTGGTTTCTAACATTAAAAT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5481642 355 - 12253515 ----ATTAAGTATAACTTAAAAG-TTTGCTGCTACAAATTACATTAAATATTTT-AATCTGGTTGAAATAGAACAACAACAAAAC--ACTTAAAATTAAGGTTTAC-ATGACATCAACACTGACTCATAAACTCCAATTATTGTACGAAAATGC-AAATAAAAGTTCATCACTCTTTAAGAATTAACACT------AAAAACCTATTTGGGGATTA-TTTTCTTCTAA-------TTCTTTAAGT-AGAA--GGAAAAATGGATAACCATAAAAAAT--GATGT---TTTATTACTGTA----ATATGAAC----CAGCAGGCCAAAGAATGCAATTAGAAAGGTGAGTGATTAATAGCCGCACACACGT--TAAA-----GTTAGTTAG----TAACCTTAAGAA i otoGar3.GL873572 I 12 C 0 s canFam3.chr16 16052113 348 + 59632846 -----------AT-ACTTAAATG-TTTGCAGCTACAATTTACATTACGTATTTT-ATTCGGATTGAAACATTAGTACAATGAAACATATTAGGAATTAGGGTTTATAAGGACATCAACACTGACTCATGAATGGCAATTATAGAAACAAAATAT-AAATAAAAGTCAATTAAATTCTAAGAATTAACACTTTATATAAGAAACTACTTGGGGGTTG-TTTTCTTCTAACAACTATCATTCTATCT-TTAA--GAA------------TGTTAGGTACAC---------CTATTGCTAAAAATAACC-AAAC----CAGGAGACAAA-----------GGAAATTTGAGCAATCGATAGAAATATTCACTT--TAAATTATGGAAAGTTAGTGTTCAATCTTAAGAT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1223305 353 + 1922530 ----------------------G-TCTGCAGCTTCAATTTACATTAAATATTCT-ATTCTGCTTGAAACATCAGTATAAGGATAC--GTTAAAAGTTAGGGTTTAT-AT---ATCAACAAAGACTCATGAACTACAATCACAGCACCAAGAAAT-AAATAAAAGTCAAACA------AAGAATTTACACT----TGAGGAAACTATTTGGAGATTA-TTTTCTACTAACAACTATCACTCTTCTG-GAAACTGGAGAGACTGATAACC-TATGGAATGTTATATATACCCATGGCTATAATCAACCAAA------AAATAGGCCAAAAACAGCAATCAGAAACATGGGCAATCAACATATGAAAATCGTT--TAAATTGTGGAAAGTTAGTTC-TAAACATAAGAT i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 85683 368 - 871265 I e tarSyr2.KE936121v1 84440 2517 + 204143 I a score=689526.000000 s hg38.chrUn_KI270746v1 51883 62 + 66486 GCAAATACCATTA-TAATCTTAGCATTTAATCACTCTTTCTTC-AGTGACCATTAGTTGTCGGT- s panTro5.chr2A 90610583 62 + 111504155 GCAAATACCATTA-TAATCTTAGCATTTAATCACTCTTTCTTC-AGTGACCATTAGTTGTCGGT- i panTro5.chr2A C 0 C 0 s panPan2.chr7 155963137 62 + 162613886 GCAAATACCATTA-TTATCTAAGCATTTAATCACTCTTTCTTC-AGTGACCATTAATTGTCGGT- i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102836221 62 + 110113093 ACAAATACCATTA-TAATCTTAGCATTTAATCACTCTTTCTTC-AGTGACCATTAGTTGTCGTT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178452880 63 + 185818997 ACAAATACCATTATTTGTGTTAGCATTTAATCACTCCTTCTTC-AGTGACCATTAGTTGTGGGT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184942608 60 + 192294377 ACAAATACCATTATTTGTGTTAGCATTTAATCACTC---CTTC-AGTGACCATTAGTTGTGGGT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7911218 63 + 15219753 ACAAATACCATTATTTGTGTTAGCATTTAATCACTCCTTCTTC-AGGGACCATTAGTTGTGGGT- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9555383 63 + 11639508 ACAAATACCATTATTTGTGTTAGCATTTAATCACTCCTTCTTC-AGTGACCATTAGTTGTGGGT- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120406940 63 + 127223203 ACAAATACCATTATTTGTATTAGCATTTAATCACTCCTTCTTC-AGTGACCATTAGTTGTGGGT- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1533264 63 - 2854183 ACAAATACCATTATTTGTGTTAGCATTTAATCACTCCTTCTTC-AGTGACCATTAGTTGTGGGT- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20239814 63 + 27496150 ACAAATACCATTATTTGTATTAGCATTTAATCACTCCTTCTTC-AGTGACCATTAGTTGTGGGT- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33690543 62 - 128169293 ACAAATACCGTTA-TAATCTTAACATTTAATCACTCCTCCTTC-AGTGACTATCATTTGTGGTT- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17028949 62 + 19594188 ACAAATACCATTA-TAATCTTAACATTTAATCACTCTTTCTTC-AGTGACTATTAATTGTGGGT- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4916609 62 - 11686629 ACAAATACCATTA-TAATCTTAACATTTAATCACTCTTTCTTC-AGTGACTATTAATTGTGGGT- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3265643 62 - 4527795 ACAGATACCATTA-TAATCTTAACATTTAATCACTCTTTCTTC-AGTGACTATTAATTGTGGGT- i aotNan1.NW_018506100v1 C 0 C 0 s eulMac1.LGHX01002433v1 86051 62 - 871265 GCAAATGGCATTA-TAATCTTAGTGTTTAATTACTCTCCCTTA-AGTGACCATGAGCTGTGGGT- i eulMac1.LGHX01002433v1 I 368 I 9177 s otoGar3.GL873572 5481997 62 - 12253515 GCAAACACCATTA-TAATCTTAGCATTCAATTACTCTTCCTTC-AGTGACCACTAGTTGTGGGG- i otoGar3.GL873572 C 0 I 1 s canFam3.chr16 16052461 63 + 59632846 GCAATATCAGCTA-TAATCCTAGCATTTAACTACTCTTCCTTCTAGTGACCACTAGTTGTGATT- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1223658 59 + 1922530 GCAAATACCATTA-TAATCTTGG---TTAATTACACTTGCTTT-AGTGACCAT-AGTTGTGGGTT i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 84440 2517 + 204143 I a score=1771122.000000 s hg38.chrUn_KI270746v1 51945 174 + 66486 TT-GGTTTCGGTTTTTACTTA-GGGAAATGAATACTTTATGGAAATTACA--TCCAATGGAC-------AAAAGTG------AAGAAACGTTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTAAAGTGCCTGATAAATTATGTAGAAAGTACTATCTTATTAAAATCTATATAACTAAAACTAA s panTro5.chr2A 90610645 174 + 111504155 TT-GGTTTCGGTTTTTACTTA-GGGAAATAAATACTTTATGGAAATTACA--TCCAATGGAC-------AAAAGTG------AAGAAACGTTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTAAAGTACCTGATAAATTATATAGAAAGTAGTATCTTATTAAAATCTATATAACTAAAACTAA i panTro5.chr2A C 0 C 0 s panPan2.chr7 155963199 174 + 162613886 TT-GGTTTTGGTTTTTACTTA-GGGAAATGAATACTTTATGGAAATTACA--TCCAATGGAC-------AAAAGTG------AAGAAACGTTAAAGTAAATTGTCCTAAATTTGCAAATTAAAATGCCTAAAGTACCTGATAAATTATATAGAAAGTAGTATCTTATTAAAATCTATATAACTAAAACTAA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102836283 175 + 110113093 TTGGGTTTCGGTTTTTACTTA-GGGAAATGAATACTTTATGGAAATTACA--TCCAATGGAC-------AAAAGTG------AAGAAATGTTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTGAAGTACCTGATAAATTATATAGAAAGTAGTATCTTATTAAAATCTATATAACTAAAACTAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178452943 173 + 185818997 TTGGGTTTCAGTTTTTACTTA-GGGAAATGAATA-TTTGTGGAAATTACA--TCCAATGGAC-------AAATACG------AAGAAATGTTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTAAAGTATCTGATAAATTATATAG-AAATAGTATCTTATTAAAAGCTATATAACTAAAACTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184942668 174 + 192294377 TTGGGTTTCAGTTTTTACTTA-GGGAAATGAATA-TTTGTGGAAATTACA--TCCAATGGAC-------AAATACG------AAGAAATGTTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTAAAGTATCTGATAAATTATATAGAAAATAGTATCTTATTAAAAGCTATATAACTAAAACTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7911281 174 + 15219753 TTGGGTTTCAGTTTTTACTTA-GGGAAATGAATA-TTTGTGGAAATTACA--TCCAATGGAC-------AAATACG------AAGAAATGTTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTAAAGTATCTGATAAATTATATAGAAAATAGTATCTTATTAAAAGCTATATAACTAAAACTAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9555446 174 + 11639508 TTGGGTTTCAGTTTTTACTTA-GGGAAATGAATA-TTTGTGGAAATTACA--TCCAATGGAC-------AAATATG------AAGAAATGTTAAAGCAAATTGTCCTAAATTTACAAATTAAAATGCCTAAAGTATCTGATAAATTATATAGAAAATAGTATCTTATTAAAAGCTATATAACTAAAACTAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120407003 174 + 127223203 TTGGGTTTCAGTTTTTACTTA-GGGAAATGAATA-TTTGTGGAAATTACA--TCCAATGGAC-------AAATATG------AAGAAAGGTTAGAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTAAAGTATCTGATAAATTATATAGAAAATAGTATCTTATTAAAAGCTATATAACTAAAACTAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1533327 174 - 2854183 TTGGGTTTCAGTTTTTACTTA-GGGAAATGAATA-TTTGTGGAAATTACA--TCCAATGGAC-------AAATATG------AAGAAATGTTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTAAAGTATCTGATAAATTATATAGAAAATAGTATCTTATTAAAAGCTATATAACTAAAACTAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20239877 174 + 27496150 TTGGGTTTCAGTTTTTACTTA-GGGAAATGAGTA-TTTGTGGAAATTACA--TCCAATGGAC-------AAATATG------AAGAAACGTTAAAGCAAATTGTCCTAAATTTGCGAATTAAAATGCCTAAAGTATCCGATAAATTATATGGAAAATAGTATCTTATTAAAAGCTATATAACTAAAACTAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33690605 170 - 128169293 TTGGGTTTCGGTTTCTATTTACGGGGAACGAATACTTTATGGAAATGATA--TCCAATGGAC-------AGAAGTG------AAGAAACATTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTACAGTACCTGataaattatataaaaaata-tatcttattaaaatctatataaCT-----TAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17029011 170 + 19594188 TTGGGTTTCGGTTTTTACTTA-AGGGAATGAAAACTTTATGGAAATGACA--TCCAATGGAC-------AGAAGTG------AAAAAACATTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGACTACAGTATCTGATAAATTATATAAAAAACAGTATCTTATTAAAATCTATATAACT-----TAT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4916671 175 - 11686629 TTGGGTTTCCGTTTTTACTTA-AGGGAATGAAAACTTTATGGAAATGACA--TCCAATGGAC-------AGAAGTG------AAAAAACTTTAAAGCAAACTGTCCTAAATTTGCAAATTAAAACGCCTACAGTATCTGATAAATTATATAAAAAATAGTATCTTATTAAAATCTATGTAACTTAAACTAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3265705 170 - 4527795 TTGGGTTTTGGTTTTTACTTA-CGGGAATGAATACTTTATGGAAATGACA--TCCAATGGAC-------AGAAGTG------AAGAAACATTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTACAGTACCTGATAAATTATATAAAAAATAGTATCTTATTAAAATCTATATAACT-----TAA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5482060 170 - 12253515 -------TTGGTTTTGA-----ATGGTATGAATATTTTATGAACATTACA--TCCAAGGGACTGACCTAACAAGTA------AAAGAATATTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATCTCTGAAGTACCTGATAAATTATACAGGAAATAGCATCttattaaaata-attaaaataaaaCTAA i otoGar3.GL873572 I 1 I 123 s canFam3.chr16 16052524 175 + 59632846 -TTGGTTTTTATTTTTATTTA-GGGAACT----ATTATCCTTAGATTACA--TCCATGGGAC-------TAATTTGTACAATGAAAAATATTAAAGCAAATTGTCCTAAATTTGCAAATTAAAATGCCTGAGATACTTGGTTATTTATACAAGAAATAGTATCTTATTAAAGTAGTTA-AAATGAAAGTAA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1223717 180 + 1922530 -TTAGTTGTGACTTTTATTTA-GGGAAATAAATATTATACTAAGATTACATTTCCAAGGGACTAATTTGAAAAGTA------AATAAATGTTAAAGCAAATTGTCCTAAATTTGAAAATAAAAATGCCTGACATAGCTGATGAATTATACTGAAAATAG---CTTACTAAAAATTGTTAAAATAATACGAA i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e tarSyr2.KE936121v1 84440 2517 + 204143 I a score=3047982.000000 s hg38.chrUn_KI270746v1 52119 276 + 66486 AGCATTTTACTTCTGAACAACCACATTCAGCAATACCCTGAACTAATC---TGAAGATGCTAAACAGCATAAAG-AAAAATGTTTACTCCACAAAGATAACATTTTAAAGAAAA--ACAAGACAAATGTCAAACAATAAAAGAATATATTTTGAATTAGGTAATTCAATGG----TGCATGC-----------------------------------------ATAA-TTTTACCAATCAAGTAACCAAAACTT-----AAGGTACATA--------------------GTACTTACCAGGTTTCTAGAATATCATCAAAT--TAACAAGTACTATCTCAT---TAATCACATAAAAA s panTro5.chr2A 90610819 281 + 111504155 AGCATTTTACTTCCAAACAACCACATTCAGCAATACCCTGAACTAATC---TGAAGATGCTAAACAGCATAAAG-AAAAATGTTTACTCCACAAAGATAACATTTTAAAGAAAA--ACAAGACAAATGTCAAACAATAAAAGAATATATTTTGAATTAGGTAATTCAATGG----TGCATGC-----------------------------------------ATAA-TTTTACCAATCAAGTAACCAAAACTTAAGACAAGGTACATA--------------------GTACTTACCAGGTTTCTAGAATATCATCAAAT--TAACAAGTACTATCTCAT---TAATCACATAAAAA i panTro5.chr2A C 0 C 0 s panPan2.chr7 155963373 285 + 162613886 AGCATTTTACTTCCAAACAACCACATTCAGCAATACCCTGAACTAATCTGATGAAGATGCTAAACAGCATAAAG-AAAAATGTTTACTCCACAAAGATAACATTTTAAAGAAAA--ACAAGACAAATGTCAAACAATAAAAGAATATATTTTGAATTAGGTAATTCAATGG----TGCATGC----------------------------------------TATAA-TTTTACCAATTAAGTAACCAAAACTTAAGACAAGGTACATA--------------------GTACTTACCAGGTTTCTAGAATATCATCAAAT--TAACAAGTACTATCTCAT---TAATCACATAAAAA i panPan2.chr7 C 0 I 20 s nomLeu3.chr13 102836458 287 + 110113093 AGCATTTTACTTCCAAACAACCACATTCAGCAATATCCTGAACTAATCTGATGAAGATGCTAAACAGCATAAAG-AAAAATGTTTACTCCATAAAGACAACATTTTAAAGAAAAACACAAGACAAATGTCAAACAATAAAAGAATATATTTTGAATTAGGTAATTCAATGG----TGCATGC----------------------------------------TATAA-TTTTACCAATTAAGTAACCAAAACTTAAGACAAGGTACATA--------------------GTACTTACCAGGTTTCTAGAATATCATCAAAT--TAGCAAGTAGTATCTCAT---TAATCACATAAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178453116 287 + 185818997 AGCATTCTACATCCAAATAACCACATTCAGCAACACCCTGAACTAATCTGATGAAGATGCTAAACAGCATACAA-AAAAATGTTTACTCCACAAAGATAACATTTTAAAGAAAAACACAAGACAAATGTCAAACAATAAAATAATCTATTTTGAATTAGGTAAATCAATGG----TGCATGC----------------------------------------TATAA-TTTTACCAATTAAGTAACCAAAACTTAAGACAAGGTACATA--------------------GTACTTACCGGGTTTCTAGAATATTATCAAAT--TAACAAGTAGTATCTCAT---TAATCACATAAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184942842 287 + 192294377 AGCATTCTACATCCAAATAACCACATTCAGCAACACCCTGAACTAATCTGATGAAGATGCTAAACAGCATACAA-AAAAATGTTTACTCCACAAAGATAACATTTTAAAGAAAAACACAAGACAAATGTCAAACAATAAAATAATCTATTTTGAATTAGGTAAATCAATGG----TGCATGC----------------------------------------TATAA-TTTTACCAATTAAGTAACCAAAACTTAAGACAAGGTACATA--------------------GTACTTACCGGGTTTCTAGAATATTATCAAAT--TAACAAGTAGTATCTCAT---TAATCACATAAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7911455 287 + 15219753 AGCATTCTACATCCAAATAACCACATTCAGCAACACCCTGAACTAATCTGATGAAGATGCTAAACAGCATACAA-AAAAATGTTTACTCCACAAAGATAACATTTTAAAGAAAAACACAAGACAAATGTCAAACAATAAAATAATCTATTTTGAATTAGGTAAATCAATGG----TGCATGC----------------------------------------TATAA-TTTTACCAATTAAGTAACCAAAACTTAAGACAAGGTACATA--------------------GTACTTACCGGGTTTCTAGAATATTATCAAAT--TAACAAGTAGTATCTCAT---TAATCACATAAAAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9555620 287 + 11639508 AGCATTTTACTTCCAAATAACCATATTCAGCAACACCCTGAACTAATCTGATGAAGATGCTAAACAGCATACAA-AAAAATGTTTACTCCACAAAGATAACATTTTAAAGAAAAACACAAGACAAACGTCAAACAATAAAATAATCTATTTTGAATTAGGTAAATTAATGG----TGCATGC----------------------------------------TATAA-TTTTACCAATTAAGTAACCAAAACTTAAGACAAGGTACATA--------------------GTACTTACCGGGTTTCTAGAATATTATCAAAT--TAACAAGTAGTATCTCAT---TAATCACATAAAAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120407177 286 + 127223203 AGAATTTTACTTCCAAATAACCACATTCAGCAACACCCTGAACTAATCTGATGAAGATGCTAAACAGCATACAA-AAAAATGTTTACTCCACAAAGATAACATTTTAAAGAAAAACACAAGACAAATGTCAAACAAT-AAATAATCTATTTTGAAATAGGTAAATCAGTGG----TGCATGC----------------------------------------TATAA-TTTTACCAATTAAGTAACCAAAACTTAAGACAAGGTACATA--------------------GTACTTACCGGGTTTCTAGAATATTATCAAAT--TAACAAGTAGTATCTCAT---TAATCACATAAAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1533501 287 - 2854183 AGCATTTTACTTCCAAATAACCATATTCAGCAACACCCTGAACTAATCTGATGAAGATGCTAAACAGCATACAA-AAAAATGTTTACTCCACAAAGATAACATTTTAAAGAAAAACACAAGACAAATGTCAAACAATAAAATAATCTATTTTGAATTAGGTAAATCAATGG----TGCATGC----------------------------------------TATAA-TTTTACCAATTAAGTAACCAAAACTTAAGACAAGGTACATA--------------------GTACTTACCGGGTTTCTAGAATATTATCAAAT--TAACAAGTAGTATCTCAT---TAATCACATAAAAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20240051 286 + 27496150 AGCATTTTACTTCCAAATAACCACATTCAATAACACCCTGAACTAATCTGATGAAGATGCTAAACAGCATACAA-AAAAATGTTTACTCCACAAAGATAACATTTTAAAG-AAAACACAAGACAAATGTCAAACAATAAAATAATCTATTTTGAATTAGGTAAATCAATGG----TGCATGC----------------------------------------TATAA-TTTTACCAATTAAGTAACCAAAACTTAAGACAAGGTACATA--------------------GTACTTACCGGGTTTCTAGAATATTACCAAAT--TAACAAGTAGTATCTCAT---TAATCACATAAAAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33690775 273 - 128169293 AGTATTTTACTTCCAAATAACCACATTCAGCAATACCCTAAACTAATCTGATGAAGATGCTAAACAGCATAAAGAAAAAATGTTTACTCCACAAAGATAATATTTTAAAGAAAAACACAAAACAAATGTCAAACAATAAAA-AACCTATTCTGAATTAGGTAATTCAATGG----TGCATGC----------------------------------------TATAA-TTTTACCAG----------------TAAGGCAAGGTACATA--------------------GTACTTACCAGGTTTCTAGACTATTATCAAATAGTAACAAGTAATAACTCAT---TAATCACATAAAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17029181 267 + 19594188 AGCATTTTACTTCCAAATAACCACATTCAGCAATACCCTGAA-----CTGATGAAGATGCTGAACAGCATAAAG-AAAAATGTTTACTCCACAAAGATAACATTTTAAAGAAAAACACAAAACAAATGTCAAACAATAAAA-AACCTATTCTGAATTAGGTAATTCAATGG----TGCATGC----------------------------------------TATAA-TGTTACCAG----------------TAAGTCAAGGTACACA--------------------GTACTTACCAGGTTTCTAGAATATTATCAAATATTAACAAGTAATATCTCAT---TAATCACATAAAAA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4916846 272 - 11686629 AGCATTTTACTTCCCAATAACCACATTCAGCAATACCCTGAACTAATCTGATGAAAATGCTAAACAGCATAAAG-AAAAATGTTTACTCCACAAAGATAACATTTTTAAGAAAAACACAAAACAAATGTCAAACAATAAAA-AACCTATTCTGAATTAGGTAATTTAATGG----TGCATGC----------------------------------------TATAA-TTTTACCAG----------------TAAGTCAAGGTACACA--------------------GTACTTACCCGGTTTCTAGAATATTATCAAATATTAACAAGTAATATCTCAT---TAATCACATAAAAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3265875 276 - 4527795 AGCATTTTACTTCCAAATAACCACATTCAGCAATACCCTGAACTAATCTGATGAAGATGCTAAACAGCATAAAG-AAAAATGTTTACTCCACAAAGATAACATTTTAAAGAAAAACACAAAACAAATGTCAAACAATAAAA-AACGTATTCTGAATTAGGTAATTCAATGGTGCATGCATGC----------------------------------------TATAA-TTTTACCAG----------------TAAGGCAAGGTACATA--------------------GTACTTACCAGGTTTCTAGAATATTATCAAATATTAACAAGTAATATCTCAT---TAACCACATAAAAA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5482353 268 - 12253515 GGCATTTCATTTCTAAGTATTTACATTGAGCAACAATCTGTGCTCATCTAATGAAGAGGCCAAACA---------GCAAATGTTTATTCCACAAAGGTAACATTCTAAAGAAAAACATGAAACAAATGTC--------AAAGTATCTACTTTGAATTAGGTAATTCCACAA----TGCACAC----------------------------------------TATAA-TTTTACCAATT-ATTGACCAAAACTTAAGACAAGATATATA--------------------GCACTTACCAGGTTTCTAGAATATTATCAAAT--TAACAAGTAGTACCCTAT---TAGTTACATAAA-- i otoGar3.GL873572 I 123 C 0 s canFam3.chr16 16052699 282 + 59632846 GACATTTTACTTCTTAATAACCACATTCAGCAATAACTTGAACTAATCTGATGAGGACGCTACGCAGCATAAAT-AAAAATGTCTACACCACAAAGATAACATTTTAAAGAAAAACACAAAACAAATGTCAAACAATAAAG-AGCCTATTTTGAATTAGGTAATTCCAGAA----CATATGC----------------------------------------TATAACTTTTATCAATTAAATGACCCAAACTTAAAAA-----ACACA--------------------GTACTTACCAGGTTTCTAGAATATTATCACAC--TAACAAATAGTAGCCTAT---TAATCACACAAAAC i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1223897 344 + 1922530 GGTATTTTGCTTGCAAACAAGCGCATTCAGTGGTAACCTAAATTAATCTGATGAAGAGGCTAAA----ATTTAA-AAAAATGTTTGCGCTACAAATATAACATTTTAAAATAAAATGCAAAACAAATGTCAAACAATAAAG-AAGCTATTTTGAATTCAGTTATTTAGCAA----TGCATGCTATAATTTTAGGCATAATTTTACCAATAATATATAATTGGTATAA-TTTTACCAATTAA-TAACCAAAACTTAAGACAAGGTATATATTACTTACCACGTAGAAACGTTACTTACCAGGTTTCTACAATATTTTCAAAC--TAACAAAGAGTATTCTATTTATTATCACATAAAAA i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e tarSyr2.KE936121v1 84440 2517 + 204143 I a score=583195.000000 s hg38.chrUn_KI270746v1 52395 66 + 66486 TACCACCAGGAATTAAAA----TAACCA---GAAATAAGAATGTGACTACTCTT-GGGGTAAGAGATAGGTAAT s panTro5.chr2A 90611100 66 + 111504155 TACCACCAGGAATTAAAA----TAACCA---GAAATAAGAATGTGACTACTCTT-GGGGTAAGAGATAGGTAAT i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102836745 66 + 110113093 TACCATCAGGAATTAAAA----TAACCA---GAAATAACAATGTGGCTACTCTT-GGGGTAAGAGATAGGTAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178453403 66 + 185818997 TACCACCAGGAATTAAAA----TAACTA---GAAACAAGAATGTGACTACTCTT-GGAGTAAGAGACAGGTAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184943129 66 + 192294377 TACCACCAGGAATTAAAA----TAACTA---GAAACAAGAATGTGACTACTCTT-GGAGTAAGAGACAGGTAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7911742 66 + 15219753 TACCACCAGGAATTAAAA----TAACTA---GAAACAAGAATGTGACTACTCTT-GGAGTAAGAGACAGGTAAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9555907 66 + 11639508 TACCACCAGGAATTAAAA----TAACCA---GAAACAAGAATGTGACTACTCTT-GGAGTAAGAGACAGGTAAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120407463 66 + 127223203 TACCACCAGGAATTAAAA----TAACCA---GAAACAAGAATGTGACTACTCTT-GGAGTAAGAGACAGGTAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1533788 66 - 2854183 TACCACCAGGAATTAAAA----TAACCA---GAAACAAGAATGTGATTACTCTT-GGAGTAAGAGACAGGTAAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20240337 66 + 27496150 TACCACCAGGAATTAAAA----TAACCA---GAAATAAGAATGTGACTACTCTT-CGGGTAAGAGACAGGTAAT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33691048 66 - 128169293 TACTACCAGGAATTACAA----TAACCA---GAAATAAAAATGTGACTACTCTT-GGGGTAACAGAGAGGTAAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17029448 66 + 19594188 TACCACCAGGAATTACAA----TAACCA---GAAATAAGAATGTGACTACTCTT-GGGGTAACAGACAGGTAAc i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4917118 66 - 11686629 TATCACCAGGAATTACGA----TGACCA---GAAATAAGAATGTGACTACTTTT-GGGGTAACAGACAGGTAAC i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3266151 66 - 4527795 TACCACCAGGAATTACAA----TAACCA---GAAATAAGAATGTGACTACTCTT-GGGGTAACAGACAGGTAAC i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5482621 62 - 12253515 TACTACCAGGAATGTAA---------TA---GAAAGATGAGCTTGACTACTCTTCGGGAGAAGACATAGTTAAT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16052981 69 + 59632846 TACCACCAGCAATTTAAA----TAATCAACCAAAGTAAGAGTTTGACAGCCCTC-TGGAGATCAGATAATTAAT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1224241 67 + 1922530 TACTGCCAGGAATGACAATAATTAACCA---GAAATAGGAGACTGAATATTCTT-TAGGGGAGGG---TATAAT i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e tarSyr2.KE936121v1 84440 2517 + 204143 I e panPan2.chr7 155963658 20 + 162613886 I a score=-7940.000000 s hg38.chrUn_KI270746v1 52461 1 + 66486 -T s panTro5.chr2A 90611166 1 + 111504155 -G i panTro5.chr2A C 0 C 0 s ponAbe2.chr7 149972000 1 + 157549271 -T i ponAbe2.chr7 N 0 C 0 s nomLeu3.chr13 102836811 1 + 110113093 -G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178453469 1 + 185818997 -G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184943195 1 + 192294377 -G i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7911808 1 + 15219753 -G i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9555973 1 + 11639508 -G i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120407529 1 + 127223203 -G i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1533854 1 - 2854183 -G i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20240403 1 + 27496150 -G i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33691114 1 - 128169293 -A i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17029514 1 + 19594188 -a i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4917184 1 - 11686629 -A i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3266217 1 - 4527795 -A i aotNan1.NW_018506100v1 C 0 C 0 s tarSyr2.KE936121v1 86957 1 + 204143 -A i tarSyr2.KE936121v1 I 2517 I 189 s otoGar3.GL873572 5482683 1 - 12253515 -A i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16053050 1 + 59632846 -G i canFam3.chr16 C 0 I 1 s dasNov3.JH575209 1224308 1 + 1922530 T- i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e panPan2.chr7 155963658 20 + 162613886 I a score=9661.000000 s hg38.chrUn_KI270746v1 52462 1 + 66486 G s panTro5.chr2A 90611167 1 + 111504155 G i panTro5.chr2A C 0 C 0 s ponAbe2.chr7 149972001 1 + 157549271 G i ponAbe2.chr7 C 0 I 365 s nomLeu3.chr13 102836812 1 + 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178453470 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184943196 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7911809 1 + 15219753 G i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9555974 1 + 11639508 G i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120407530 1 + 127223203 G i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1533855 1 - 2854183 G i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20240404 1 + 27496150 G i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33691115 1 - 128169293 G i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17029515 1 + 19594188 g i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4917185 1 - 11686629 G i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3266218 1 - 4527795 G i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5482684 1 - 12253515 A i otoGar3.GL873572 C 0 C 0 s dasNov3.JH575209 1224309 1 + 1922530 A i dasNov3.JH575209 C 0 C 0 e canFam3.chr16 16053051 1 + 59632846 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e tarSyr2.KE936121v1 86958 189 + 204143 I e panPan2.chr7 155963658 20 + 162613886 I a score=2344728.000000 s hg38.chrUn_KI270746v1 52463 301 + 66486 AATAACAGTATTTTgagaaaagccacacaagca---atagactggtttcatttttaagtcacaaactcaacccgca-caca-ttgaagtccagcaatccaactc----attctctccagcaaacactttattt-tttcccttccaggattaccctca------ggtgttctttcttacccatcaaatctctaacctagc-----------tc------------aggtaatcactaggctgatttcac-tgagcagcaaccactgcaggtcaattacctcactttc-----ataattt---------------------------------------------------ccaatcaacttgaatctgtacctatgt-------------cttcttccctactattaa----------tag s panTro5.chr2A 90611168 297 + 111504155 AATAACAGTATTTtg-gaaaagccacacaagca---atagactggtttcatttttaagtcacaaactcaacccaca-caca-ttgaagtccagcaatccaactc----attctctccagcaaacact---ttt-tttcccttccaggattaccctca------ggtgttctttcttacccatcaaatctctaacctagc-----------tc------------aggtaatcactatgctgatttcac-tgagcagcaaccactgcaggtcaattacctcactttc-----ataattt---------------------------------------------------caaatcaacttgaatctgtacctatgt-------------cttcttccctactattag----------tag i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102836813 301 + 110113093 AATAACAGTATTTTgagaaaagccacacaagca---acagactggtttcatttttaagtcacaaactcaacccaca-caca-ttgaagtccagcaatccaactc----attctctccagcaaacactttattt-ttttccctccaggattaccctta------ggtgttctttcttacccatcaaatctctaacctagc-----------tc------------cggtaatcactatgctgatttcac-tgagcagcaaccactgcaggtcagttacaacactttc-----ataattt---------------------------------------------------caaatcaacttgaatctgtacccatgt-------------cttcttccctactattaG----------TAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178453471 302 + 185818997 AATAACAGTATTTTGAGAAAAGCCATGCAAGCA---ATAGACTGGTTTCATTTTTAAGTCACAAACTCAATCCACA-GACA-TTGAAGTCCGGCTATCCAACTC----ACTCTCTCCAGCAAAGACTTTATTTATTTTCCCTCCAGGATCACCCTTG------GGTATTCTTTCTTACCCATCAAATCTCTAACCTAGC-----------TC------------ACGTAATCACTATGCTGATTTCAC-TAAGCAGCAACCACTGCAGGTcaattacctcactttc-----ataatct---------------------------------------------------caaatcaacttgaatctgtacctatgt-------------cttcttccctactattag----------tag i rheMac8.chr3 C 0 I 4 s macFas5.chr3 184943197 302 + 192294377 AATAACAGTATTTTGAGAAAAGCCATGCAAGCA---ATAGACTGGTTTCATTTTTAAGTCACAAACTCAATCCACA-GACA-TTGAAGTCCGGCTATCCAACTC----ACTCTCTCCAGCAAAGACTTTATTTATTTTCCCTCCAGGATCACCCTTG------GGTATTCTTTCTTACCCATCAAATCTCTAACCTAGC-----------TC------------ACGTAATCACTATGCTGATTTCAC-TAAGCAGCAACCACTGCAGGTCAATTACCTCACTTTC-----ATAATCT---------------------------------------------------CAAATCAACTTGAATCTGTACCTATGT-------------CTTCTTCCCTACTATTAG----------TAG i macFas5.chr3 C 0 I 4 s macNem1.NW_012015910v1 7911810 302 + 15219753 AATAACAGTATTTTGAGAAAAGCCATGCAAGCA---ATAGACTGGTTTCATTTTTAAGTCACAAACTCAATCCACA-GACA-TTGAAGTCCGGCTATCCAACTC----ACTCTCTCCAGCAAAGACTTTATTTATTTTCCCTCCAGGATCACCCTTG------GGTATTCTTTCTTACCCATCAAATCTCTAACCTAGC-----------TC------------ACGTAATCACTATGCTGATTTCAC-TAAGCAGCAACCACTGCAGGTcaattacctcactttc-----ataatct---------------------------------------------------caaatcaacttgaatctgtacctatgt-------------cttcttccctactattag----------tag i macNem1.NW_012015910v1 C 0 I 4 s cerAty1.NW_012008583v1 9555975 298 + 11639508 AATAACAGTATTTTGAGAAAAGCCATGCAAGCA---ATAGACTGGTTTCATTTTTAAGTCACAAACTCAATCCACA-GACA-TTGAAGTCGGGCTATCCAACTC----ACTCTCTCCAGCAAAGAC----TTTATTTTCCCTCCAGGATCACCCTTG------GGTATTCTTTCTTACCCATCAAATCTCTAACCTAGC-----------TC------------ACATAATCACTATGCTGATTTCAC-TAAGCAGCAACCACTGCAGGTcaattacctcactttc-----ataatct---------------------------------------------------caaatccatttgaatctgtacctatgt-------------cttcttccctactattag----------tag i cerAty1.NW_012008583v1 C 0 I 4 s chlSab2.chr21 120407531 299 + 127223203 AATAACAGTACCTTGAGAAAAGCCATGCAAGCA---ATAGACTGGTTTCATTTTTAAGTCACAAACTCAATCCACA-GACA-TTGAAGTCCAGCTATCCAACCC----ATTCTCTCCAGCAAACACTTTATTTATTTTCCCTCCAGGATCACCCTTG------GGTATTCTTTCTTACCCATCAAATCTCTAACCTAGC-----------TC------------ACGTAATCACTATGCTGATTTCAC-TAAGCAGCAACCACTGCAGGTCAACTACCTCACTTTC-----ATAATCT---------------------------------------------------CAAATCAACTTGAATCTATACCTATGT-------------CTTCTTCCCTACTAT-------------TAG i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012102765v1 1533856 302 - 2854183 AATAACAGTATTTTGAGAAAAGCCATGCAAGCA---ATAGACTGGTTTCATTTTTAAGTCACAAACTCAATCCACA-GACA-TTGAAGTCGGGCTATCCAACTC----ACTCTCTCCAGCAAAGACTTTATTTATTTTCCCTCCAGGATCACCCTTG------GGTATTCTTTCTTACCCATCAAATCTCTAACCTAGC-----------TC------------ACGTAATCACTATGCTGATTTCAC-TAAGCAGCAACCACTGCAGGTcaattacctcactttc-----ataatct---------------------------------------------------caaatcaacttgaatctgtacctatgt-------------cttcttccctactattag----------tag i manLeu1.NW_012102765v1 C 0 I 4 s colAng1.NW_012115154v1 20240405 300 + 27496150 AATAACAGTATTTTGAGAAAAGCCATGCAAGCA---ATAGACTGATTTCATTTTTAAGTCACAAACTCAATCCACA-GACA-TTGAAGTCCAGCTATCCAACTC----ATTCTC----------ACTTTATTTATTTTCCCTTCAGGATCACCCTTG------GGTATTCTTTCTTACCCATCAATTCTCTAATCTAAC-----------TC------------GTGTAATCACTATGCTGATTTCAC-TAAGCAGCAACCACTGCGGGTCAATTACCTCACTTTC-----ATAATCT---------------------------------------------------CAAATCAACTTGAATCTGTACC--TGT-------------CTTCTTCCCTACTATTAGTCCAGGGTCTTAG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33691116 298 - 128169293 AGCAACATTATctatagaaaaaccatgcaagca---atagaccggtttcacttttaagtcataagctcaacccata-caca-ttgaagtccagcaatccaactc----attctctccagaaaacactttat---ttttcactccaagattacgctta------cgttttctttcttacccatcaaacctctaacctagc-----------tc------------aggtaa-cactatgctgatttcac-tgagcagcaagcactgcaggtcaactaccccacttcc-----ataattt---------------------------------------------------caaatcaacttaaatctgtacctatgt-------------cttcttccctactgttac----------taG i calJac3.chr8 C 0 I 13 s saiBol1.JH378140 17029516 286 + 19594188 aggaacattacctatagaaaaaccatgcaagca---atagactggtttcacttttaagtcataaactcaacccaca-caca-ttgaagtccagcaatccaactc----attctctccagcaa---------------tcactccaagattacgctta------ggttttctttcttactcatcaaatctctaacCTAGC-----------TC------------AGGTAA-CACTATGCTGATTTCAC-TGAGCAGCGATCACTGCAAGTCAATTACCTCACTTTC-----AGAATTT---------------------------------------------------CACATCAACTTAAATGTGTACCTATGT-------------CTTCTTCCCTACTATTAG----------TAG i saiBol1.JH378140 C 0 I 342 s cebCap1.NW_016107335v1 4917186 295 - 11686629 AGTAACATTACctatagaaaaaccatgcaagca---atagactggtttcacttttaagtcataaactcaacccaca-caca-ttgaagtccagcaatccaactc----attctctccaacaaacactttt-------tcactccaagattacgcttc------ggttttctttcttacccatcaaatctctaacCGAGC-----------TC------------AGGTAA-CACTATGCTGATTTCACTTGAGCAGCAACCACTGCAGGTCAATTACCTTACTTTT-----ATAATTT---------------------------------------------------CAAATCAACTTAAATCTGCACCTATGT-------------CTTCTTCCCTACTATTAG----------TAG i cebCap1.NW_016107335v1 C 0 I 13 s aotNan1.NW_018506100v1 3266219 298 - 4527795 AGTAACATTACCTATATAAAAACCATGCAAGAA---ATAGATTGGTTTCACTTTTAAGTCATAAACTCAACCCACA-CACA-TTGAAGTCCAGCAATCCAACTC----ATTCTCTCCAGCAAACACTTTAT---TTTTCACTCTAAGATTACGCTTA------GGTTTTCTTTCTTACCCATCAAATCTCTAACCTAGC-----------TC------------AGGTAA-CACTATGCTGATTTCAC-TGAGCAGCAATCACTGCAGGTCAATTACCTCACTTTC-----ATAATTT---------------------------------------------------CAAATCAACTTAAATCTGTACCTATGT-------------CTTCTTCCCTACTATTAG----------TAG i aotNan1.NW_018506100v1 C 0 I 13 s otoGar3.GL873572 5482685 305 - 12253515 GATAACAGTATTTTgagaaaaaccacacaaggg---ggagactggttaca-ttttgattcacacatataaaccacatggcatttgaagaccagcaattaaactt----actct----aacaaacactc------ttcaccctccaggattactcttcttcagttttactctccctgacccatcaaa--tctgacctggc-----------tttatccaaaatgggctcaatggctatgctgatttcac-tgaacagcaatcacagcaggtgtataatctccctttc------ccacat---------------------------------------------------cagatcaacctg-ctctatatctatgg-------------catcttccc--ccgttac----------tGG i otoGar3.GL873572 C 0 I 3 s canFam3.chr16 16053052 181 + 59632846 AGTAACATTATTTTGAGAAAAACCACACAAGGA---AGAGACTGGTTTCAATT------------------------AACC-TC-------------------------------------------------------------------CCCTCA---------------------------------------AAC-----------TC------------AGGTAATGGCTATGCTAATTTTAC-TAA-------------CAGGTGAATTACCCCGTGTTA-----CTACTAT---------------------------------------------------CAGATCAACCTGTATCTATACCTGAGTGTACAGTGTACAGCTGCATCCAGGTTCTC------------TGG i canFam3.chr16 I 1 C 0 s dasNov3.JH575209 1224310 373 + 1922530 Atgaacagtattttgagaaaaaccgcacaatccagtagagactggattcccttttaattcatgagctcaaacctca-aacattttaagtccagtaacccaaataaatgatcctctctagcaaacacttgt----tttacccttcattattaagcttg------tactttttctctgacctatcaaatctctaatttaccattctcctcagtc------------agctaatggttatggttatttcaa-agtacagcaaccactgcaagggaattgcctcatctcccccacatAATTGTATTTACTGGTAAGTAAATAAAAGAGTGGGTGGGAGCAAGAGAAGATTAGATAAATCTACTTCCATCTATACCTATTC-------------CTCCTTCCCTTCTGTGTC----------CAG i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e ponAbe2.chr7 149972002 365 + 157549271 I e tarSyr2.KE936121v1 86958 189 + 204143 I e panPan2.chr7 155963658 20 + 162613886 I a score=-12521.000000 s hg38.chrUn_KI270746v1 52764 3 + 66486 gga--------- s panTro5.chr2A 90611465 3 + 111504155 gga--------- i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102837114 3 + 110113093 TCC--------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178453777 3 + 185818997 ggg--------- i rheMac8.chr3 I 4 I 9 s macFas5.chr3 184943503 3 + 192294377 GGG--------- i macFas5.chr3 I 4 I 9 s macNem1.NW_012015910v1 7912116 3 + 15219753 ggg--------- i macNem1.NW_012015910v1 I 4 I 9 s cerAty1.NW_012008583v1 9556277 3 + 11639508 ggg--------- i cerAty1.NW_012008583v1 I 4 I 9 s chlSab2.chr21 120407834 3 + 127223203 GGG--------- i chlSab2.chr21 I 4 I 9 s manLeu1.NW_012102765v1 1534162 3 - 2854183 ggg--------- i manLeu1.NW_012102765v1 I 4 I 9 s colAng1.NW_012115154v1 20240705 1 + 27496150 --G--------- i colAng1.NW_012115154v1 C 0 I 2 s rhiBie1.NW_016826791v1 825003 1 - 1396338 --g--------- i rhiBie1.NW_016826791v1 N 0 I 2 s calJac3.chr8 33691427 3 - 128169293 GAA--------- i calJac3.chr8 I 13 C 0 s cebCap1.NW_016107335v1 4917494 3 - 11686629 GAA--------- i cebCap1.NW_016107335v1 I 13 C 0 s aotNan1.NW_018506100v1 3266530 3 - 4527795 GAA--------- i aotNan1.NW_018506100v1 I 13 C 0 s otoGar3.GL873572 5482993 2 - 12253515 AA---------- i otoGar3.GL873572 I 3 C 0 s canFam3.chr16 16053233 3 + 59632846 GAA--------- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1224683 11 + 1922530 -GGTCTTCACTA i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e ponAbe2.chr7 149972002 365 + 157549271 I e tarSyr2.KE936121v1 86958 189 + 204143 I e panPan2.chr7 155963658 20 + 162613886 I e saiBol1.JH378140 17029802 342 + 19594188 I a score=11849.000000 s hg38.chrUn_KI270746v1 52767 1 + 66486 a s panTro5.chr2A 90611468 1 + 111504155 a i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102837117 1 + 110113093 A i nomLeu3.chr13 C 0 I 16 s rheMac8.chr3 178453789 1 + 185818997 a i rheMac8.chr3 I 9 C 0 s macFas5.chr3 184943515 1 + 192294377 A i macFas5.chr3 I 9 C 0 s macNem1.NW_012015910v1 7912128 1 + 15219753 a i macNem1.NW_012015910v1 I 9 C 0 s cerAty1.NW_012008583v1 9556289 1 + 11639508 a i cerAty1.NW_012008583v1 I 9 C 0 s papAnu3.chr3 173517145 1 + 180432695 a i papAnu3.chr3 N 0 C 0 s chlSab2.chr21 120407846 1 + 127223203 A i chlSab2.chr21 I 9 C 0 s manLeu1.NW_012102765v1 1534174 1 - 2854183 a i manLeu1.NW_012102765v1 I 9 C 0 s colAng1.NW_012115154v1 20240708 1 + 27496150 A i colAng1.NW_012115154v1 I 2 C 0 s rhiBie1.NW_016826791v1 825006 1 - 1396338 a i rhiBie1.NW_016826791v1 I 2 C 0 s calJac3.chr8 33691430 1 - 128169293 A i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107335v1 4917497 1 - 11686629 A i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3266533 1 - 4527795 A i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5482995 1 - 12253515 G i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16053236 1 + 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1224694 1 + 1922530 A i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e ponAbe2.chr7 149972002 365 + 157549271 I e tarSyr2.KE936121v1 86958 189 + 204143 I e panPan2.chr7 155963658 20 + 162613886 I e saiBol1.JH378140 17029802 342 + 19594188 I a score=8695.000000 s hg38.chrUn_KI270746v1 52768 1 + 66486 c s panTro5.chr2A 90611469 1 + 111504155 g i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102837134 1 + 110113093 g i nomLeu3.chr13 I 16 C 0 s rheMac8.chr3 178453790 1 + 185818997 c i rheMac8.chr3 C 0 I 5 s macFas5.chr3 184943516 1 + 192294377 C i macFas5.chr3 C 0 I 5 s macNem1.NW_012015910v1 7912129 1 + 15219753 c i macNem1.NW_012015910v1 C 0 I 5 s cerAty1.NW_012008583v1 9556290 1 + 11639508 c i cerAty1.NW_012008583v1 C 0 I 5 s papAnu3.chr3 173517146 1 + 180432695 c i papAnu3.chr3 C 0 N 0 s chlSab2.chr21 120407847 1 + 127223203 C i chlSab2.chr21 C 0 I 5 s manLeu1.NW_012102765v1 1534175 1 - 2854183 c i manLeu1.NW_012102765v1 C 0 I 5 s nasLar1.chr3 173327545 1 + 179790006 c i nasLar1.chr3 N 0 I 9584 s colAng1.NW_012115154v1 20240709 1 + 27496150 C i colAng1.NW_012115154v1 C 0 I 5 s rhiRox1.KN298742v1 997356 1 + 2025953 c i rhiRox1.KN298742v1 N 0 N 0 s rhiBie1.NW_016826791v1 825007 1 - 1396338 c i rhiBie1.NW_016826791v1 C 0 I 16809 s calJac3.chr8 33691431 1 - 128169293 C i calJac3.chr8 C 0 I 5 s cebCap1.NW_016107335v1 4917498 1 - 11686629 C i cebCap1.NW_016107335v1 C 0 I 5 s aotNan1.NW_018506100v1 3266534 1 - 4527795 C i aotNan1.NW_018506100v1 C 0 I 5 s otoGar3.GL873572 5482996 1 - 12253515 C i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16053237 1 + 59632846 C i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1224695 1 + 1922530 T i dasNov3.JH575209 C 0 I 5 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e ponAbe2.chr7 149972002 365 + 157549271 I e tarSyr2.KE936121v1 86958 189 + 204143 I e panPan2.chr7 155963658 20 + 162613886 I e saiBol1.JH378140 17029802 342 + 19594188 I a score=8460.000000 s hg38.chrUn_KI270746v1 52769 1 + 66486 t s panTro5.chr2A 90611470 1 + 111504155 t i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102837135 1 + 110113093 t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178453796 1 + 185818997 t i rheMac8.chr3 I 5 C 0 s macFas5.chr3 184943522 1 + 192294377 T i macFas5.chr3 I 5 C 0 s macNem1.NW_012015910v1 7912135 1 + 15219753 t i macNem1.NW_012015910v1 I 5 C 0 s cerAty1.NW_012008583v1 9556296 1 + 11639508 t i cerAty1.NW_012008583v1 I 5 C 0 s chlSab2.chr21 120407853 1 + 127223203 T i chlSab2.chr21 I 5 C 0 s manLeu1.NW_012102765v1 1534181 1 - 2854183 t i manLeu1.NW_012102765v1 I 5 C 0 s colAng1.NW_012115154v1 20240715 1 + 27496150 T i colAng1.NW_012115154v1 I 5 C 0 s calJac3.chr8 33691437 1 - 128169293 C i calJac3.chr8 I 5 C 0 s saiBol1.JH378140 17030144 1 + 19594188 T i saiBol1.JH378140 I 342 C 0 s cebCap1.NW_016107335v1 4917504 1 - 11686629 T i cebCap1.NW_016107335v1 I 5 C 0 s aotNan1.NW_018506100v1 3266540 1 - 4527795 T i aotNan1.NW_018506100v1 I 5 C 0 s tarSyr2.KE936121v1 87147 1 + 204143 C i tarSyr2.KE936121v1 I 189 I 2085 s otoGar3.GL873572 5482997 1 - 12253515 T i otoGar3.GL873572 C 0 I 4 s canFam3.chr16 16053238 1 + 59632846 C i canFam3.chr16 C 0 I 5 s dasNov3.JH575209 1224701 1 + 1922530 T i dasNov3.JH575209 I 5 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e ponAbe2.chr7 149972002 365 + 157549271 I e panPan2.chr7 155963658 20 + 162613886 I a score=446472.000000 s hg38.chrUn_KI270746v1 52770 48 + 66486 gtTGTCAAAAGCCATTTCTCTCTTCTCATTTTACTCATGCTCCTGACA s panTro5.chr2A 90611471 48 + 111504155 gttgtcAAAAGCCATTTATCTTTTCTCATTTTACTCATGCTCCTAACA i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102837136 48 + 110113093 gttgtcaaaagccatttctctttcctcattttactcatgctcctaaca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178453797 48 + 185818997 attgtcaaaagccatttctcttttctcattttactcatgctcctaaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184943523 48 + 192294377 ATTGTCAAAAGCCATTTCTCTTTTCTCATTTTACTCATGCTCCTAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7912136 48 + 15219753 attgtcaaaagccatttctcttttctcattttactcatgctcctaaca i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9556297 48 + 11639508 attgtcaaaagccatttctcttttctcattttactcatgctcctaaca i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120407854 48 + 127223203 ATTGTCAAAAGCCATTTCTCTTTTCTCATTTTACTCATGCTCCTAATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1534182 48 - 2854183 attgtcaaaagccatttctcttttctcattttactcatgctcctaaca i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20240716 48 + 27496150 ATTGTCAAAAGCCATTTCTCTTTTCTTATTTTACTCATGCTCCTAACA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33691438 48 - 128169293 ATTGTCAGAAGCTCTTTCTCTTTTTTCATTTTACTCACACTCCTAACA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17030145 48 + 19594188 GTTGTCAAAAGCTGTTTGTCTTTTTTCATGTTACTCATATTCCCAACA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4917505 48 - 11686629 GTTGTCAAAAGCTGTTTCTCTTTTTTCGTTTTACTCACACTCCTAACA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3266541 48 - 4527795 GTTGTCAAAAGCTGTTTCTCTTTTTTCATTTTACTCACACTCCTAACA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5483002 35 - 12253515 AGTGTTAAAGGCCATTTCTCTGTTCTCATTT-------------AACA i otoGar3.GL873572 I 4 C 0 s canFam3.chr16 16053244 47 + 59632846 GCTGCCAGA-GTCATTTTTCTATTCTCACTGTACTCACACTGTCAACA i canFam3.chr16 I 5 C 0 s dasNov3.JH575209 1224702 48 + 1922530 GTTGTCAAAAGTCATTTCTTTATTCCCATTTTATTCAAACTCTCAAGA i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e ponAbe2.chr7 149972002 365 + 157549271 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e panPan2.chr7 155963658 20 + 162613886 I a score=11007.000000 s hg38.chrUn_KI270746v1 52818 2 + 66486 TC s panTro5.chr2A 90611519 2 + 111504155 TC i panTro5.chr2A C 0 C 0 s ponAbe2.chr7 149972367 2 + 157549271 TC i ponAbe2.chr7 I 365 I 242 s nomLeu3.chr13 102837184 2 + 110113093 tc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178453845 2 + 185818997 tg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184943571 2 + 192294377 TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7912184 2 + 15219753 tg i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9556345 2 + 11639508 tg i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120407902 2 + 127223203 TC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1534230 2 - 2854183 tg i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20240764 2 + 27496150 TC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33691486 2 - 128169293 TC i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17030193 2 + 19594188 TC i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4917553 2 - 11686629 TC i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3266589 2 - 4527795 TC i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5483037 2 - 12253515 TC i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16053291 2 + 59632846 CC i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1224750 2 + 1922530 TT i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e panPan2.chr7 155963658 20 + 162613886 I a score=850776.000000 s hg38.chrUn_KI270746v1 52820 103 + 66486 TGTCATACTGTTCTGCTGGATTTG--GCAGCAGTccacc-tgtggatatttcact-gactt-cctcgctaatctttcttcatctcctgtacgtgttcttcctctattt s panTro5.chr2A 90611521 103 + 111504155 TGGCATACTGTTCTGCTGGATTTG--GCAGcagcccacc-tgtggatatttcact-gactt-cctcgctaatctttcttcatctcctgtacgtgttcttcctctattt i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102837186 103 + 110113093 tggcatactgttctgctagatttg--gcagcagcccacc-tgtggatgtttcact-gactt-cctcgctaatctttcttcatctcctgtatgtgttcttcctctattt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178453847 103 + 185818997 tggcatactattctgctggatttg--gcagcagcacacc-tgtggatgtttcact-gactt-cctcgctaatctttcttcatctcccgtacatgttcttcctgtattt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184943573 103 + 192294377 TGGCATACTATTCTGCTGGATTTG--GCAGcagcacacc-tgtggatgtttcact-gactt-cctcgctaatctttcttcatctcccgtacatgttcttcctgtattt i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7912186 103 + 15219753 tggcatactattctgctggatttg--gcagcagcacacc-tgtggatgtttcact-gactt-cctcgctaatctttcttcatctcccgtacatgttcttcctgtattt i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9556347 103 + 11639508 tggcatactattctgctggatttg--gcagcagcacacc-tgtggatgtttcact-gactt-cctcgctaatctttcttcatctcccgtacatgttcttcctgtattt i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120407904 103 + 127223203 TGGCATACTATTCTGCTGCATTTG--GCAGCAGCACACC-TGTGGATGTTTCACT-GACTT-CGTCACTAATCTTTCTTCATCTCCTGTACATGATCTTCCTGTATTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1534232 103 - 2854183 tggcatactattctgctggatttg--gcagcagcacacc-tgtggatgtttcact-gactt-cctcgctaatctttcttcatctcccgtatatgttcttcctgtattt i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20240766 103 + 27496150 TGGCATACTATTCTGCTGGATTTG--GCAGCAGCACACC-TGTGGATGTTTCACT-GACTT-CCTCACTAATATTTCTTCATCTCCTGTACATGTTCTTCCTGTATTT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33691488 98 - 128169293 TGACATACTACTCTGCTGGATTTG--GCAGCAGCACATC-TATGGATGTTTCACT-GACCT-CCTCACTAAAC-----TCATCTCCTATACATGTTCTTCCTCTATCT i calJac3.chr8 C 0 I 2252 s saiBol1.JH378140 17030195 98 + 19594188 TGGCATACTGCTCTGCTGGATTTG--GCAGCAGTACATC-TATGGATGTTtcact-gacct-cctcactaatc-----tcatctcctatacatgttcttcctctatct i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4917555 98 - 11686629 TGGCATACTGCTCTGCTGGATTTG--GCAGCAGCACATC-TATGGATGTTTCACT-GACCC-TCTCGCTAATC-----TCATCTCCTATACATGTTCTTCCTCTATCT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3266591 97 - 4527795 TGGCATACTGCTCTGCTGGATTTG--GCAGCAGCACATC-TATGGATGTTtcact-gacct-ccttgct-atc-----tcacctcctatacatgttcttcctctatct i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5483039 102 - 12253515 TGGC-CACAGCTTAGCTGGACTCA--GCAGCAACACATT-GGTGGACATTCCACT-GCCCT-CCCTGCTGGGCTTTCTGCATCTCCTACTCAAGCTGTTCCTCTACCT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16053293 104 + 59632846 -TACATCCAGTTCCGTTGGGTTCAATGCGGCAACAAACC-CGTGAATGTGGCCCT-GCcctgccctgctgacctttc-tgtccccccgagcacgttcttcctccacct i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1224752 101 + 1922530 TGACA---AGCTCTGTTAGGTTCT--GTGGCAGCACACCTTGCTGCTATTTCAGTCGATTTCCCTGGCTTATCATTCT--GTCTCCTAGGAAAATTCTTCCTCCGCCT i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e ponAbe2.chr7 149972369 242 + 157549271 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e panPan2.chr7 155963658 20 + 162613886 I a score=713406.000000 s hg38.chrUn_KI270746v1 52923 92 + 66486 gacttcca-aagccctggag----ttt-cccagggcttgagcctagat-------------------------cctaaatgg-tattatctacaatgagga----------catcttggaagttgatgcttccc s panTro5.chr2A 90611624 92 + 111504155 gacttcca-aagccctggag----ttt-cccagggcttgagcctagat-------------------------cctaaatgg-tgttatctacaatgaggg----------catcttggaagttgatgcttccc i panTro5.chr2A C 0 C 0 s nomLeu3.chr13 102837289 92 + 110113093 gacttcca-aagccctggag----ttt-cccagggcttgagcctagat-------------------------cctaaatgg-tattatctacaatgaggg----------catcttggaagttgatgcttccc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178453950 92 + 185818997 gacttcca-aagccctggag----ttt-cccagggcttgggcctagac-------------------------ctgaaatgg-tattatctacaacgaggg----------tgtcttggaagttgttgcctctt i rheMac8.chr3 C 0 I 1 s macFas5.chr3 184943676 92 + 192294377 gacttcca-aagccctggag----ttt-cccagggcttgagcctagac-------------------------ctGAAATGG-TATTATCTACAACGAGGG----------TGTCTTGGAAGTTGTTGCCTCTT i macFas5.chr3 C 0 I 1 s macNem1.NW_012015910v1 7912289 92 + 15219753 gacttcca-aagccctggag----ttt-cccagggcttgagcctagac-------------------------ctgaaatgg-tattatctacaacgaggg----------tgtcttggaagttgttgcctctt i macNem1.NW_012015910v1 C 0 I 1 s cerAty1.NW_012008583v1 9556450 92 + 11639508 gacttcca-aagccctggag----ttt-cccagggcttgagcctagac-------------------------ccgaaatgg-tattatctacaacgaggg----------tgtcttggaagttgttgcctctt i cerAty1.NW_012008583v1 C 0 I 1 s chlSab2.chr21 120408007 92 + 127223203 GACTTCCA-AAGCCCAGGAG----TTT-CCCAGGGCTTGAGCCTAGAC-------------------------CCAAAATGG-TATTATCTACAACGAGGG----------CGTCTTAGAAGTTGTTGCCTCTT i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012102765v1 1534335 92 - 2854183 gacttcca-aagccctggag----ttt-cccagggcttgagcctagac-------------------------ccgaaatgg-tattatctacaacgaggg----------tgtcttggaagttgttgcctctt i manLeu1.NW_012102765v1 C 0 I 1 s colAng1.NW_012115154v1 20240869 92 + 27496150 GACTTTCA-AAGCCCTAGAG----TTT-CCCAGGGCTTGAGCCTAGAC-------------------------CCGAAATGG-TATTATCTACAATGAGGG----------TGTCTTGGAAGTTGTTACCTCTT i colAng1.NW_012115154v1 C 0 I 1 s calJac3.chr8 33693838 89 - 128169293 GATTTTCA-AAGCCCCAGAG----TTT-CCCAGGGCTTGAGCCTAGAT-------------------------TCGAAATGG-TATTATCTATGTTGAGGG----------CCTCTTGAAAgacgtctccc--- i calJac3.chr8 I 2252 C 0 s saiBol1.JH378140 17030293 89 + 19594188 gatttcta-aagccctagag----ttt-cccagggcttgagcctagat-------------------------tctaaatgg-tattatctacattgcggg----------cctcttggaagatgtctccc--- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4917653 89 - 11686629 GATTTCCA-AAGCCCTAGAG----TTT-CCCAGGGCTTGAGCCTAGAT-------------------------TCTAAATGG-TATTATCTACATTGAGGG----------CCTCTTGGAAgatgtctccc--- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3266688 89 - 4527795 gatttccg-aagccctagag----ttt-cccagggcttgagcctagat-------------------------tccaaatgg-tattatctacattgagga----------cctcttggaaaatgtctccc--- i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5483141 106 - 12253515 GACCTTC--AAGCCCCAATGTTGTTTT-CCCAGGGCTGAAGCCTAGAC-------------------------CATAAATGGATGTTATCTACAACAAGGACTTTAAACATCATCTTGGAAGTTGTTACAGCCC i otoGar3.GL873572 C 0 I 4 s canFam3.chr16 16053397 125 + 59632846 gacctcca-aagccc-agtg----ttt-cccgggg-ttgagcctagacaacgctcttctctgtgtagtctctttctaaatgg-tacgatctctaaggaggccagtaaacaccatcttgaaggttgttgtctccc i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1224853 99 + 1922530 GACCTCAACAAGCTGTGGTG----TTTCCCCATGGCTCAAGTCTGGACAACCCTCCAC---------------TCCATATAT-TCTCATCCAAAATGATGC----------TTTCATTG-----gttccttctc i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e ponAbe2.chr7 149972369 242 + 157549271 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e panPan2.chr7 155963658 20 + 162613886 I a score=331620.000000 s hg38.chrUn_KI270746v1 53015 42 + 66486 ----acattcttatttct-ggttttaa-----acaaagatctcc--aaattaga s panTro5.chr2A 90611716 42 + 111504155 ----acattcttatttct-agttttaa-----tcaaagatctcc--aaattagc i panTro5.chr2A C 0 C 0 s panPan2.chr7 155963678 41 + 162613886 ----ACATTCTTATTTCT-AGTTTTAA-----TCAAAGATCTCC---AATTAGC i panPan2.chr7 I 20 C 0 s nomLeu3.chr13 102837381 42 + 110113093 ----acattcttatttct-agttttaa-----tcagagatctcc--aaattagc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454043 42 + 185818997 ----acattcttgtatct-agttttaa-----tcaggtatctcc--aaattagc i rheMac8.chr3 I 1 C 0 s macFas5.chr3 184943769 42 + 192294377 ----ACATTCTTGTATCT-AGTTTTAA-----TCAGGTATctcc--aaattagc i macFas5.chr3 I 1 C 0 s macNem1.NW_012015910v1 7912382 42 + 15219753 ----acattcttgtatct-agttttaa-----tcaggtatctcc--aaactagc i macNem1.NW_012015910v1 I 1 C 0 s cerAty1.NW_012008583v1 9556543 42 + 11639508 ----acattcttgtatct-agttttaa-----tcaggtatctcc--aaattagc i cerAty1.NW_012008583v1 I 1 C 0 s chlSab2.chr21 120408100 42 + 127223203 ----ACATTCTTGTATCT-AGTTTTAA-----CCAGAgatctcc--aaattagc i chlSab2.chr21 I 1 C 0 s manLeu1.NW_012102765v1 1534428 42 - 2854183 ----acattcttgtatct-agttttaa-----tcaggtatctcc--aaattagc i manLeu1.NW_012102765v1 I 1 C 0 s colAng1.NW_012115154v1 20240962 42 + 27496150 ----ACATTCTTGTATCT-AGTTTTAA-----CCAGAGATCTCG--AAATTAGC i colAng1.NW_012115154v1 I 1 C 0 s calJac3.chr8 33693927 42 - 128169293 ----acattcttattttt-agttataa-----cctgctatctcc--aaattagc i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17030382 42 + 19594188 ----acattcttattttt-agttttaa-----cctgagatctcg--aaattagc i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4917742 42 - 11686629 ----acattcttattttt-agttttaa-----cctgacatctcc--aaattagc i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3266777 42 - 4527795 ----acattcttattttt-agttttaa-----cctgggatctcc--aaattagc i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5483251 48 - 12253515 ----TCAGTCACATTTCTAAGTTTTAACTAGTTCTGAGATCTCC--AAGTTGAG i otoGar3.GL873572 I 4 C 0 s canFam3.chr16 16053522 43 + 59632846 ----aaatttacatttct-aattccaa------catgttcctgcggaagtcagt i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1224952 46 + 1922530 aaagtcctccccatcttt-acaattca-----catccagtcctc--aggtcaga i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e ponAbe2.chr7 149972369 242 + 157549271 I e tarSyr2.KE936121v1 87148 2085 + 204143 I a score=11422.000000 s hg38.chrUn_KI270746v1 53057 1 + 66486 a s panTro5.chr2A 90611758 1 + 111504155 a i panTro5.chr2A C 0 C 0 s panPan2.chr7 155963719 1 + 162613886 A i panPan2.chr7 C 0 C 0 s ponAbe2.chr7 149972611 1 + 157549271 g i ponAbe2.chr7 I 242 N 0 s nomLeu3.chr13 102837423 1 + 110113093 a i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454085 1 + 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184943811 1 + 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7912424 1 + 15219753 a i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9556585 1 + 11639508 a i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120408142 1 + 127223203 a i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1534470 1 - 2854183 a i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241004 1 + 27496150 A i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33693969 1 - 128169293 a i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17030424 1 + 19594188 a i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4917784 1 - 11686629 a i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3266819 1 - 4527795 a i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5483299 1 - 12253515 G i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16053565 1 + 59632846 a i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1224998 1 + 1922530 a i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I a score=5343685.000000 s hg38.chrUn_KI270746v1 53058 578 + 66486 ----------------ggattttcaacttccttct------------tagcatttccattttctcacacaaaacccctcttaagtttgccatgtttaaa-----------atttctcccttaaccggtttca--t---------cccagt-cttc--------------------cccatccttataaatggcatccagt------------------------------------------cccttgtcac-----------------------------tctcctctgct-tcttcag------------------------tcctctc-----------------------------------------ccccaacacttcgtcaatgcaaat---catcagcaaattcaagactttttatcttcaagttttgtctccaatccttctacttcttgtcacttccaccactagcagcacactcgtggccaccaccatctctcacctaacctgctacaagagtctactgctggttatgcttctccc-accctgcatctactcaaacctttccc--cac--agcagccagaggaacttttcaa-aagtacaaatgtgatcaagcaagtcactattctatttcaaa-----cc--ttcaattgcttctcagagc-acttaa---aatacaaacctttcccagtgcctttctctaa-ctcat---catgtggcacttgtctccctgctgc------t----------atgct-ccagctattctggcttccttgctgtccttc-aaacatgccaagctctgtatcaatcag s panTro5.chr2A 90611759 578 + 111504155 ----------------gaattttcaacttccttct------------tagcatttccattttctcacataaaacccctcttaagtttgccatgtttaaa-----------atttctcccttaaccggtttca--t---------cccagt-cttc--------------------cccatcattataaatggcatccagt------------------------------------------cccttgtcac-----------------------------tctcctctgct-ccttcag------------------------tcctctc-----------------------------------------ccgcaacacctcgtcaatgcaaat---catcagcaaattcaagactttttatcttcaagttttgtctccgatccttctacttcttgtcacttccaccactagcagcccactcgtggccaccaccatctctcacctaacctgctacaagagtctgctgctggttatgcttctccc-accctgcatctactcaagcctttccc--cac--agcagccagaggaacttttcaa-aagtacaaatgtgatcaagcaagtcactattctatttcaaa-----tc--ttcaattgcttctcagagc-acttaa---aagacaaacctttcccagtgcctttctccag-ctcat---cttgtggcacttgtctccctgctgc------t----------atgct-ccagctattctggcttccttgctgtccttc-aaacatgccaagctctttatcagtcag i panTro5.chr2A C 0 C 0 s panPan2.chr7 155963720 571 + 162613886 ----------------GGATTTTCAA---ccttct------------tagcatttccattttctcacacaaa--ccctcttaagtttgccatgtttaaa-------------ttctcccttaaccggcttca--t---------cccagt-cttc--------------------cccatccttataaatggcatccagt------------------------------------------cccttgtcac-----------------------------tctcctctgct-ccttcag------------------------tcctctc-----------------------------------------ccccaacacttcgtcaatgcaaat---catcagcaaattcaagactttttatcttcaagttttgtctccgatccttctacttcttgtcacttccaccactagcagcccactcgtggccaccaccatctctcacctaacctgctacaagagtctactgctggttatgcttctccc-accctgcatctactcaagcctttccc--cac--agcagccagaggaacttttcaa-aagtacaaatgtgatcaagcaagtcattattctatttcaaa-----cc--ttcaattgcttctcagagc-acttaa---aagacaaacctttcccagtgcctttctccaa-ctaac---cttgtggcatttgtctccccgctgc------t----------acgct-ccagctattctggcttccttgctgtccttc-aaacatgccaagctctttatcaatcag i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102837424 579 + 110113093 ----------------ggattttcaccttccttct------------tagcatttccattttctcacacaaaacccctcttaagtttgccatgtttaaa-----------atttatcccttaaccggtttca--t---------cccagt-cttc--------------------cctatccttataaatggcatccagt------------------------------------------cccttgtcac-----------------------------tctcctctgct-ccttcag------------------------tcctctc-----------------------------------------ccccaacactttgtcaatgcaaat---catcagcaaattcaagactttttatcttcaagttttgtctccgatccttctacttcttgttacttccaccgctagcagctcagtcgtggccaccaccatctctcacctaacctgctgtaagagtctactgctggttatgcttctccc-accctgcatctactcaagcctttccc--cac--agcagccagaggaacttttcaa-aagtacaaatgtgatctagcaagtcactattctatttcaaa-----cc--ttcaattgcttctcagagc-acttaa---aagacaaacctttcccagtgcctttctccaa-ctcat---cttgtggcacttgtctccctgctgc------t----------atgct-ccagctattctggcttccttgctgtccttcaaaacatgccaagctctttatcaatcag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454086 577 + 185818997 ----------------ggattttcaacttccttct------------tagcatttccattttctcacacaaa--acctcttaagtttgccatgtttaaaa---------aatttctcccttaaccggtttca--t---------cccagt-cttc--------------------cccatccttataaatggcacccagt------------------------------------------cccttgtcac-----------------------------tctcctctgct-ccttcag------------------------tcctctc-----------------------------------------ccccaacacttcgtcaatgcagat---catcagtaaattcaagactttttatcttcaagttttgtctctgatccttctacttcttgtcacttccaccgccagcagcccagttgtcgccaccaccatctctcgcctaacatgctgcaagagtctactgctggttatgctgttccc-agcctgcatctactccagcctttccc--cac--agcagccagaggaactttgcgc-aagtacaaatgtgatcaagcaagtcactattctatttcaaa-----cc--ttcaactgcttctcaaagc-acttaa---aagacaaacctttcccagtgcctttctccaacctcgt---gttgtggcacttgtctccctgctac------t----------gtgct--cggctactctggcttcctt-ctgtccttc-aaacatgccaagctctttatcagtcag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184943812 577 + 192294377 ----------------ggattttcaacttccttct------------tagcatttccattttctcacacaaa--acctcttaagtttgccatgtttaaaa---------aatttctcccttaaccggtttca--t---------cccagt-cttc--------------------cccatccttataaatggcacccagt------------------------------------------cccttgtcac-----------------------------tctcctctgct-ccttcag------------------------tcctctc-----------------------------------------ccccaacacttcgtcaatgcagat---catcagtaaattcaagactttttatcttcaagttttgtctctgatccttctacttcttgtcacttccaccgccagcagcccagttgtcgccaccaccatctctcgcctaacatgctgcaagagtctactgctggttatgctgttccc-agcctgcatctactccagcctttccc--cac--agcagccagaggacctttgcgc-aagtacaaatgtgatcaagcaagtcactcttctatttcaaa-----cc--ttc-actgcttctcaaagc-acctaa---aagacaaacctttcccagtgcctttctccagcctcat---cttgtggcacttgtctccctgctac------t----------gtgct--cggctactctggcttccttgctgtccttc-aaacatgccaagctctttatcaatcag i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7912425 578 + 15219753 ----------------ggattttcaacttccttct------------tagcatttccattttctcacacaaa--acctcttaagtttgccatgtttaaaa---------aatttctcccttaaccggtttca--t---------cccagt-cttc--------------------cccatccttataaatggcacccagt------------------------------------------cccttgtcac-----------------------------tctcctctgct-ccttcag------------------------tcctctc-----------------------------------------ccccaacacttcgtcaatgcagat---catcagtaaattcaagactttttatcttcaagttttgtctctgatccttctacttcttgtcacttccaccgccagcagcccagttgtcgccaccaccatctctcgcctaacatgctgcaagagtctactgctggttatgctgttccc-agcctgcatctactcaagcctttccc--cac--agcagccagaggaactttgcgc-aagtacaaatgtgatcaagcaagtcacgattctatttcaaa-----cc--ttcaactgcttctcaaagc-acttaa---aagacaaacctttcccagggcctttctccagcctcat---cttgtggcacttgtctccctgctac------t----------gtgct--cggctattctggcttccttgctgtccttc-aaacatgccaagctctttatcaatcag i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9556586 579 + 11639508 ----------------ggattttcaacttccttct------------tagcatttccattttctcacacaaa--acctcttaagtttgccatgtttaaaa---------aatttctcccttaaccagtttca--t---------cccagt-cttc--------------------cccatccttataaatggcacccagt------------------------------------------cccttgtcac-----------------------------tctcctctgct-ccttcag------------------------tcctcta-----------------------------------------ccccaacacttcgtcaatgcagat---catcagtaaattcaagactttttatcttcaagttttgtctctgatccttctacttcttgtcacttccaccgccagcagcccagttgtcgccaccaccatctctcgccttacatgctgcaagagtctactgctggttatgctgttccc-agcctgcatctactcaagcctttccc--cac--agcagccagaggaactttgcgc-aagtacaaatgtgatcaagcaagtcactattctatttcaaa-----cc--ttcaactgcttctcaaagc-acttaa---aagacaaacctttcccagtgcctttctccaacctcat---cttgtggcacttgtctccctgctac------t----------atgct-ccggctattctggcttccttgctgtccttc-aaacatgccaagctctttatcaatcag i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120408143 578 + 127223203 ----------------ggattttcaactcccttct------------tagcatttccattttctcacacaaa--accttttaagtttgccatgtttaaaa---------aatttctcccttaaccggtttca--t---------cccagt-cttc--------------------cccatccttataaatggcacccagt------------------------------------------cccttgtcac-----------------------------tctcctctgct-ccttcag------------------------tcctctc-----------------------------------------ccccaacacttcgtcaatgaagat---catctgtaaattcaaggctttttatcttcaagttttgtctctgatccttctacttcttgtcacttccaccgccagcagcccagttgtggccaccaccatctctcgcctaacatgctgcaagagtctactgctggttatgctgttccc-agcctgcatttactcaagcctttccc--cac--agc-gccagaggagctttgcaa-aagtacaaatgtgatcaagcaagtcactattctatttcaaa-----cc--ttcagctgcttctcagagc-acttaa---aagacaaacctttcccagtgcctttctccaacctcat---cttgtggcacttgtctccctgctac------t----------atgct-ccggctattctggcttccttgctgtccttc-aaacatgccaagctctttatcaatcag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1534471 579 - 2854183 ----------------ggattttcaacttccttct------------tagcatttccattttctcacacaaa--acctcttaagtttgccatgtttaaaa---------aatttctcccttaaccggtttca--t---------cccagt-cttc--------------------cctatccttataaatggcacccagt------------------------------------------cccttgtcac-----------------------------tctcctctgct-ccttcag------------------------tcctctc-----------------------------------------ccccaacacttcgtcaatgcagat---catcagtaaattcaagactttttatcttcaagttttgtctctgatccttctacttcttgtcacttccaccgccagcagcccagatgtcgccaccaccatctctcgcctaacatgctgcaagagtctactgctggctatgctgttccc-agcctgcatctactcaagcctttccc--cac--agcagccagaggaactttgcgc-aagtacaaatgtgatcaagcaagtcaccattctatttcaaa-----cc--ttcaactgcttctcaaagc-atttaa---aagacaaacctttcccagtgcctttctccaacctcat---cttgtggcacttgtctccctgctac------t----------atgct-ccggctattctggcttccttgctgtccttc-aaacatgccaagctctttatcaatcag i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241005 579 + 27496150 ----------------GGattttcaacttccttct------------tagcatttccattttctcacacaaa--acctcttaagtttgccatgtttaaaa---------aatttctcccttaactagtttca--t---------cccagt-cttc--------------------cccatccttataaatggcacccagt------------------------------------------cccttgtcac-----------------------------tctcctctgct-ccttcag------------------------tcctctc-----------------------------------------ccccaacacttcgtcaatgcagat---catgagtaaattcaagactttttatcttcaagttttgtctctgatccttctacttcttgtcacttccaccgccagcagcccagttgtggccaccaccatctctcgcctaacatgctgcaagagtctactgttgattatgctgttccc-accctgtatctactcaagcctttccc--cac--agcagccagaggaactttgcaa-aagtacaaacgtgatcaagcaagtcactattctatttcaaa-----cc--ttcaactgcttctcagagc-acttaa---aagacaaacccttcccagtgcctttctccaacctcat---cttgtggcacttgtctccctgctac------t----------atgct-ccggctattctggcttccttgctgtccttc-aaacacgccaagctctttatcaatcag i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33693970 572 - 128169293 ----------------ggattttcaacttccttct------------tagcatttccattttctcatacaca--ccctcttaagtttgccatgtttaaa-----------atttctctcttaactagtttca--t---------cccagt-cttc--------------------cccatccttataaatggtatctagt------------------------------------------ccctcgtcat-----------------------------tctcctctgct-ccttcga------------------------tcctctg-----------------------------------------aaccaacacttcctcaaggcaaat---catcagtaaatccaagactttttatctgcaagttttgtctccgatcattccacttt---gcacttcccctgccagcaggccagtcctggccatcaccatctctcacctaacctgctgcaagagtctactgctatttatgcttctccc-acccttcatctactcaagcctttatc--cac--agcagccagaggaacttttcaa-aagtacaaatgtgactaagcaagtcactattccatttcaaa-----tc--ttca--tacttctcagagt-acttaa---aagagaaacctttcccagtgccctcctccaacctcat---cttgtggtacttgtctccctgctgc------t----------atgct-ccagctattctggcttccttgctgtccttc-agacatgccaagctcttcatcaatcag i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17030425 572 + 19594188 ----------------ggattttcaacttccttct------------tagcatttccattttctcacacaca--ccctcttaagtttgccatgtttaaa-----------gtttctcccttaactagtttca--t---------cccagt-cttc--------------------cccacccttataaacggtatctact------------------------------------------cccttgtcat-----------------------------tctcctctgct-ccttcaa------------------------tcctctg-----------------------------------------aatcaacacttcctcaatgcaaat---catcagtaaatccaagactttttatctgcaagttttgtctccgatcattctacttt---gcacttcccctgccagcagcccagtcctggccaccaccatctctcacctaacctgctgcaagagtctactgctgtttatgcttctccc-acccttcatctactcaagccttcctc--cac--agctgccagaggaacttttcaa-aagtataaatgtgaccaagcaagtcactattctatttcaaa-----tc--ttca--tacttctcagggc-acctaa---aagacaaaccttgcccagtgccctcctccaacctcat---cttgtggtacttgcctccctgctgc------t----------atgct-ccagctattctggcttccttgctgtccttc-agacatgtcaagctcttcatcaatcag i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4917785 572 - 11686629 ----------------ggattttcaacttccttct------------tagtatttccattttctcacacaca--ccctcttaagtttgccatgtttaaa-----------attactcccttaactagtttca--t---------cccagt-cttc--------------------cccatccttataaatggtatctagt------------------------------------------cccctgtcat-----------------------------tctcctctgat-ccttcaa------------------------tcctctg-----------------------------------------agccaacatttcctcaatgcaaat---catcagtaaatccaagactttttatctgcaagttgtgtctccaatcattctacttt---gcacttcccctgccagcagcccagtcctggccaccaccatctctcacctaacctgctgcaagagtctactgctgtttatgcttctccc-acccttaatctactcaagcctttctc--cac--agcagccagaggaagttttcaa-aagtacaaatgtgaccaagcaagtcactattccatttcaaa-----tc--ttca--tgcttttcagagc-acttaa---aagacaaacctttcccagtgccctcctccaacctcat---cttgtggtacttgcctacctgctgc------t----------atgct-cctgctattctggcttccttgctgtccttc-agacatgccaagcTCTTCATCAATCAG i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3266820 573 - 4527795 ----------------ggattatcaacttccttct------------tagcatttccattttctcacacaca--ccctcttaagtttgtcatgtttaca-----------atttctcccttacctagtttca--t---------cccagtccttc--------------------cccatccttataaatgttatctagt------------------------------------------cccttgtcat-----------------------------tctgctctgtt-ccttcaa------------------------tcctctg-----------------------------------------aaccaacacttgctcaatgcaaat---catcagtaaatccaagactttttagctgcaagttttgtctctgatcattctacttt---gcacttcccctgccagcagcccagttctggccaccaccatctctcacctaacccactgcaagagtctactgctgtttatgcttctccc-acccttcatctactcaagtctttctc--cac--agcagccagaggaacttttcaa-aagtacaaatgtgaccaagcaagtcactattccacttcaaa-----tc--ttca--tacttctcagagc-acttaa---aagacaaacctttcccagtgccctcctccaacctcat---cttgtagtacttgtctccctgctgc------t----------atgct-ccagctattctggcttccttgctgtccttc-agacatgccaagctcttcatcagtcag i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5483300 553 - 12253515 ----------------TGATTTTCAACTTCCTTGT------------TAGCATTTCCATTTTGTCACACAAA--ACCTCTTAAATGTATCATG-------------------TTCCCCCTTAACTGGTTTCA--T---------CTT-GT-AGTC--------------------TCCACCCTAATGAATGGCATCCATTCTTCTGGTCAGAAAGCTGGGAGTCATGTGTATATGTTCTTTCCCCTGGTCAC-----------------------------TCTCCTCAGGTCCCTTCAA------------------------TCTTCCC-----------------------------------------CCTTAACATTCCACGTATGCCAAT---CATCAGTGAACTCAGAA---TTTATTGTCAGGGTCCACCACTGGTCACTGCACTTCTCTGTGCTTCTACCA---------------------------------------------GTAATAGTCTACTGGTTTTCACACTTCTCTC-------------CTCA--CCTTTCTC--CACAAAGCTGCCAGAGGAACTTTTCAA-ATCGACACAGCTTTTGAACCAAGTGTCTAACCTATCATAAATAAATCC--TTCAACTGGT--TCAGTGTAATCCAA---AAGACAAACCCTTCTCACTAGCCCTCTCTAGCCTCCTTGCCTTGTGGCAC-TGTCTCCCTGAGGG------T----------GTGCCCCCAGCGACCCTGGCTTCCTT-----CCTTC-AAACATGCAGCATTCTCCATCTTTTGA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16053566 477 + 59632846 ----------------cagttttcaacttccttct------------tagcacttccatcctgtcacaccaa--atctctccagtttaccacgtctacta--------caatctctcccttacccagttctggct---------cacaat-ctcc--------------------cccatctttagaaatggattccagc------------------------------------------cctcatctga-----------------------------tctgttcttct-ccctcat------------------------cactctc-----------------------------------------ccctgccactccttcaatccaaac---catcagtaaattcggcaca----gtcttcaGGCtct--------------------------------------------------------------------------------------------------tcatgattctccctaccctgcatctccctaagcccttccctgcac--aacagccagaaggac-ttgcaa-aaatgtaaatctgatggagcaagacaccaccttgttttaaa-----cccttccaacagcttctcaaggc-acttaACTTACTGCAATCCTTTCCCGGTGTCTCTCTCCCACTTTAT---CCTGTGGC-----CCTCTCTCATGAAATGGGT----------GTGAC-CCAGCTA---------CCTTGCTTTccttt-aaacatgccattctctttagctggg-- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1224999 690 + 1922530 agccaggagtcatctttgatttgttcttttcttttaTCAGTCTTCTCTGCCCTTTCAATCCTCTCCTAGCCA---CTCCTTTATTCTCCCCTCCCCAAGATGGCACCCTCGTCTGTCTGTTCACTGTCTGCT--TGGTGTGTCCGCTTGT-CTTcttctgtgtcagaggcaggtgcccaaccacttgagtcacatctgct------------------------------------------ccctgctcattgtgtctgcttgcatgtcaattcattgtgtcagctcgtct-tctttagaaagcaccagaaactgaacccaaaacctctcatgtgggaggcgggcacccaactacttgagcttcatctgctccctgcCACTCCTTTAATTTAAACTTAcatcagtaaattcagtactctttatcttcaaattttgtctccaatcttt----------gcaccttcactgtaggtagaccagtcctgtctagcaccatctctcacctA------------------------------------CT-ATCATG-------TCAAGTCTCTCCA--CAC--AGTAACCAGAGGGACTTTAAAATATATATAAATCTGATCAA-TAAGTTACCATTCTATTTTATA-----CC-TTTCAATTGTTTGT----GT-GTTTAC---AATATAAACCTTTcctactgcctctctccaacctcat---cttatagcattc-cctctctgcatt------cccttcaaaaggagct-ctagctccttttgcttctatg----tatcc-aaagatgccaagtgttttaccaatcag i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I a score=241526.000000 s hg38.chrUn_KI270746v1 53636 24 + 66486 agcccagctgactcacaacacttc s panTro5.chr2A 90612337 24 + 111504155 agccCAACTGACTCAGAACACTTC i panTro5.chr2A C 0 C 0 s panPan2.chr7 155964291 24 + 162613886 agcccgactgactcagaacacttc i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838003 24 + 110113093 agcccaactgactcagaacacttc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454663 24 + 185818997 agcccaactgactcagaacacttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944389 24 + 192294377 agcccaactgactcagaacacttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913003 24 + 15219753 agcccaactgactcagaacacttt i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557165 24 + 11639508 agcccaactgactcagaacacttt i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120408721 24 + 127223203 agcccaactgactcagaacacttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535050 24 - 2854183 agcccaactgactcagaacacttt i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241584 24 + 27496150 agcccaactaactcagaacacttt i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33694542 24 - 128169293 agccCAACTGACTCAGAACACTTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17030997 24 + 19594188 agccCAACTGACTCAGAACACTTC i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4918357 24 - 11686629 AGTCCAACTGACTCAGAACACTTC i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3267393 24 - 4527795 agccCAACTGACTCAGAACACTTC i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16054043 12 + 59632846 -ggcctcctgact----------- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1225689 24 + 1922530 gaccctactgactcagatcacttc i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e otoGar3.GL873572 5483853 0 - 12253515 C a score=280396.000000 s hg38.chrUn_KI270746v1 53660 33 + 66486 actataccattctggctcttcaataaatgtctg s panTro5.chr2A 90612361 33 + 111504155 ACTATACCATTCTAGCCCTTCAGTAAATGTCTG i panTro5.chr2A C 0 C 0 s panPan2.chr7 155964315 33 + 162613886 gctatatcattccagcccctcaataaatgtctg i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838027 33 + 110113093 actataccatgccagtcctttaataaatgtctg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454687 33 + 185818997 actataccattccagtccttcaataaatgtctg i rheMac8.chr3 C 0 I 19 s macFas5.chr3 184944413 33 + 192294377 actataccattccagtccttcaataaatgtctg i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913027 32 + 15219753 actataccattccagtcc-tcaataaatgtctg i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557189 33 + 11639508 actataccattccagcccttcaataaatgtctg i cerAty1.NW_012008583v1 C 0 I 19 s chlSab2.chr21 120408745 33 + 127223203 actataccattccagcccttcaataaatgtctg i chlSab2.chr21 C 0 I 19 s manLeu1.NW_012102765v1 1535074 33 - 2854183 actataccattccagcccttcaataaatgtctg i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241608 33 + 27496150 actataccattccagcccttcaataaatgtctg i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33694566 33 - 128169293 ACTATACCATTCCAGACCTTTAATAAATGTCTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17031021 33 + 19594188 ACTATACCATTCTAGACCTTTAATAAATGTCTG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4918381 33 - 11686629 ACTATACCATTCCAGACCTTTAACAAATGTCTG i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3267417 33 - 4527795 ACTATACCGTTCCAGACCTTTAATAAATGTCTG i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16054055 16 + 59632846 -----------------ccccaatggacggctg i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1225713 0 + 1922530 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e otoGar3.GL873572 5483853 0 - 12253515 C a score=10924.000000 s hg38.chrUn_KI270746v1 53693 22 + 66486 gc------attttctttctttctttttt s panTro5.chr2A 90612394 20 + 111504155 GC------Attttctttctttc--tttt i panTro5.chr2A C 0 C 0 s panPan2.chr7 155964348 20 + 162613886 gc------attttctttctttc--tttt i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838060 20 + 110113093 gc------attttctttctttc--tttt i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184944446 18 + 192294377 -c------tgcttttttgtttg--ttt- i macFas5.chr3 C 0 I 1 s macNem1.NW_012015910v1 7913059 18 + 15219753 -c------tgcttttttgtttg--ttt- i macNem1.NW_012015910v1 C 0 I 1 s manLeu1.NW_012102765v1 1535107 18 - 2854183 -c------tgcttttttgtttg--ttt- i manLeu1.NW_012102765v1 C 0 I 1 s colAng1.NW_012115154v1 20241641 18 + 27496150 -c------tgtttttttgtttg--ttt- i colAng1.NW_012115154v1 C 0 I 1 s calJac3.chr8 33694599 20 - 128169293 GCtttttttttttttttttt-------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17031054 14 + 19594188 GC------tttttttttttt-------- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4918414 13 - 11686629 GC-------ttttttttttt-------- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3267450 14 - 4527795 GC------tttttttttttt-------- i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1225713 0 + 1922530 C e canFam3.chr16 16054071 0 + 59632846 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e otoGar3.GL873572 5483853 0 - 12253515 C e chlSab2.chr21 120408778 19 + 127223203 I e cerAty1.NW_012008583v1 9557222 19 + 11639508 I e rheMac8.chr3 178454720 19 + 185818997 I a score=776622.000000 s hg38.chrUn_KI270746v1 53715 96 + 66486 tttttgagatggagtctcactctgtcacccaggctagagtgtggtggtgtgatctcggctcactgcaacctctatctcccaggttcaagcaattct s panTro5.chr2A 90612414 96 + 111504155 tttttgagatggagtctcgctctgtcacccaggctagagtgcggtggtgcgatctcggctcactgcaacctctacctcccaggttcaagcaattct i panTro5.chr2A C 0 C 0 s panPan2.chr7 155964368 96 + 162613886 cttttgagatggagtctcgctctgtcacccaggctagagtgcggtggtgcgatttcggctcacagcaacctctacctcccaggttcaagcaattct i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838080 96 + 110113093 tttttgagatggagtctcactctaccacccaggctagagtgcggtggtgcaatctcggctcactgcaacctctacctcccaggttcaagcgattct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454739 96 + 185818997 tttttgagatggagtctcgctctgtcacccaggctaaagtgtggtggtgcgatctcggctcactgcaacctccacctcccgggttcaagtgattct i rheMac8.chr3 I 19 C 0 s macFas5.chr3 184944465 96 + 192294377 tttttgagatggagtctcgctctgtcacccaggctaaagtgtggtggtgcgatctcggctcactgcaacctccacctcccgggttcaagtgattct i macFas5.chr3 I 1 C 0 s macNem1.NW_012015910v1 7913078 96 + 15219753 tttttgagatggagtctcgctctgtcacccaggctaaagtgtggtggtgcgatctcggctcactgcaacctccacctcccgggttcaagtgattct i macNem1.NW_012015910v1 I 1 C 0 s cerAty1.NW_012008583v1 9557241 96 + 11639508 tttttgagatggagtctcgctctgtcacccaggctaaagtgtggtggtgcgatctcggctcactgcaacctccacctcccgggttcaagtgattct i cerAty1.NW_012008583v1 I 19 C 0 s chlSab2.chr21 120408797 96 + 127223203 tttttgagatggagtcttgctctgtcacccaggctagagtgtggtggtgcgatctcggctcactgcaacctccacctcccgggttcaagtgattct i chlSab2.chr21 I 19 C 0 s manLeu1.NW_012102765v1 1535126 96 - 2854183 tttttgagatggagtctcgctctgtcacccaggctaaagtgtggtggtgcgatcttggctcactgcaacctccacctcccgggttcaagtgattct i manLeu1.NW_012102765v1 I 1 C 0 s colAng1.NW_012115154v1 20241660 96 + 27496150 tttttgagatggagtctcgctctgtcacccaggctagagtgtggtggtgcgatctcggctcactgcaacctccacctcctgggttcaagtgattcc i colAng1.NW_012115154v1 I 1 C 0 s calJac3.chr8 33694619 75 - 128169293 tttttgagaccgagtctcactcggttgcccaggctgaagtgcagtggcgcgatctcggctca---------------------atcaagcgattct i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17031068 94 + 19594188 ttttggagacggagtctcact--gttgcccaggctggagtgcagtggcacgatctcggctcactgcaacctctgcctcccaggatcaagcgattct i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4918427 96 - 11686629 ttttggagatggagtctcactctgttgcccaggctggagtgcggtggcacaatctcggctcactgcgacatctgcctcccaggatcaagcgattct i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3267464 96 - 4527795 ttttggagacagagtctcactctgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaacctctgcctcccaggatcaagagattct i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1225713 0 + 1922530 C e canFam3.chr16 16054071 0 + 59632846 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e otoGar3.GL873572 5483853 0 - 12253515 C a score=12000.000000 s hg38.chrUn_KI270746v1 53811 1 + 66486 c s panTro5.chr2A 90612510 1 + 111504155 c i panTro5.chr2A C 0 C 0 s panPan2.chr7 155964464 1 + 162613886 c i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838176 1 + 110113093 c i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454835 1 + 185818997 c i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944561 1 + 192294377 c i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913174 1 + 15219753 c i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557337 1 + 11639508 c i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120408893 1 + 127223203 c i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535222 1 - 2854183 c i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241756 1 + 27496150 c i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33694694 1 - 128169293 c i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17031162 1 + 19594188 c i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4918523 1 - 11686629 c i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3267560 1 - 4527795 c i aotNan1.NW_018506100v1 C 0 C 0 s dasNov3.JH575209 1225713 1 + 1922530 c i dasNov3.JH575209 C 0 C 0 e canFam3.chr16 16054071 0 + 59632846 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e otoGar3.GL873572 5483853 0 - 12253515 C a score=81341.000000 s hg38.chrUn_KI270746v1 53812 7 + 66486 ctgcctc s panTro5.chr2A 90612511 7 + 111504155 ttgcctc i panTro5.chr2A C 0 C 0 s panPan2.chr7 155964465 7 + 162613886 ctgcctc i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838177 7 + 110113093 ctgcctc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454836 7 + 185818997 ctgcctc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944562 7 + 192294377 ctgcctc i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913175 7 + 15219753 ctgcctc i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557338 7 + 11639508 ctgcctc i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120408894 7 + 127223203 ctgcctc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535223 7 - 2854183 ctgcctc i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241757 7 + 27496150 ctgcctc i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33694695 7 - 128169293 ctgcctc i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17031163 7 + 19594188 ctgcctc i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4918524 7 - 11686629 ctgcctc i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3267561 7 - 4527795 ctgcctc i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16054071 7 + 59632846 ctgcttc i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1225714 7 + 1922530 ctactgc i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e otoGar3.GL873572 5483853 0 - 12253515 C a score=451049.000000 s hg38.chrUn_KI270746v1 53819 57 + 66486 aagcctcctgagtagctgggattacaggcatgcaccaccaggcccggctaatttttg s panTro5.chr2A 90612518 57 + 111504155 aagcctcctgagtagctgggattacaggcatgcaccaccacgcccggctaatttttg i panTro5.chr2A C 0 C 0 s panPan2.chr7 155964472 57 + 162613886 aagcctcctgagtagctgggattacaggcatgtgccaccaggcccggctaatttttg i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838184 57 + 110113093 aagcctcctgagtagctgggattacaggcatgcgccaccaggcccggataatttttg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454843 56 + 185818997 -agcctcatgagtagctgggattacaggcatgcaccaccatgcctggctaatttttg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944569 56 + 192294377 -agcctcatgagtagctgggattacaggcatgcaccaccatgcccggctaatttttg i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913182 56 + 15219753 -agcctcatgagtagctgggattacaggcgtgcaccaccatgcccggctaatttttg i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557345 56 + 11639508 -agcctcatgagtagctgggattacaggcgtgcaccaccatgcccggctaatttttg i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120408901 56 + 127223203 -agtctcgtgagtagctgggattacaggtgtgcaccaccatgcccggctaattttta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535230 56 - 2854183 -agcctcatgagtagctgggattacaggcgtgcaccaccatgcccggctaatttttg i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241764 56 + 27496150 -agtctcgtgagtagctgggattacaggcatgcaccaccatgcccggctaatttttg i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33694702 56 - 128169293 -catctcctgagtagctgggattacaggcacgtaccaccatgcccagctaatttttg i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17031170 56 + 19594188 -cacctcctgagtagctgggattacaggcatgtaccaccacgcccagctaatttttg i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4918531 56 - 11686629 -cacctcctgagtagctgggattacaggcacccaccaccacgcccagctaatttttg i cebCap1.NW_016107335v1 C 0 I 26 s aotNan1.NW_018506100v1 3267568 56 - 4527795 -cacctcctgagtagctgggaatacaggcacgcaccaccacgcccagctaatttttg i aotNan1.NW_018506100v1 C 0 C 0 s dasNov3.JH575209 1225721 5 + 1922530 ---------------------------------------aagcc------------- i dasNov3.JH575209 C 0 C 0 e canFam3.chr16 16054078 0 + 59632846 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e otoGar3.GL873572 5483853 0 - 12253515 C a score=53942.000000 s hg38.chrUn_KI270746v1 53876 6 + 66486 tatttt s panTro5.chr2A 90612575 6 + 111504155 tatttt i panTro5.chr2A C 0 N 0 s panPan2.chr7 155964529 6 + 162613886 tatttt i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838241 6 + 110113093 tatttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454899 6 + 185818997 tatttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944625 6 + 192294377 tatttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913238 6 + 15219753 tatttt i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557401 6 + 11639508 tatttt i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120408957 6 + 127223203 tatttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535286 6 - 2854183 tatttt i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241820 6 + 27496150 tatttt i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33694758 6 - 128169293 tatttt i calJac3.chr8 C 0 I 1 s saiBol1.JH378140 17031226 6 + 19594188 tatttt i saiBol1.JH378140 C 0 I 1 s aotNan1.NW_018506100v1 3267624 6 - 4527795 tatttt i aotNan1.NW_018506100v1 C 0 I 1 s dasNov3.JH575209 1225726 4 + 1922530 --tttt i dasNov3.JH575209 C 0 C 0 e canFam3.chr16 16054078 0 + 59632846 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e otoGar3.GL873572 5483853 0 - 12253515 C e cebCap1.NW_016107335v1 4918587 26 - 11686629 I a score=45223.000000 s hg38.chrUn_KI270746v1 53882 11 + 66486 aggagcaataa s panTro5.chr7 156351452 11 + 166211670 aggagcgatac i panTro5.chr7 N 0 C 0 s panPan2.chr7 155964535 11 + 162613886 aggagcgatac i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838247 11 + 110113093 aggagcgatac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454905 11 + 185818997 agtagagacat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944631 11 + 192294377 agtagagacat i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913244 11 + 15219753 agtagagacat i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557407 11 + 11639508 agtagagacat i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120408963 11 + 127223203 agtagagacac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535292 11 - 2854183 agtagagacat i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241826 11 + 27496150 agtagagacac i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33694765 11 - 128169293 agcagaaatga i calJac3.chr8 I 1 I 8 s saiBol1.JH378140 17031233 11 + 19594188 agtagagatga i saiBol1.JH378140 I 1 I 8 s aotNan1.NW_018506100v1 3267631 11 - 4527795 agtagagatga i aotNan1.NW_018506100v1 I 1 I 8 s dasNov3.JH575209 1225730 6 + 1922530 ---aaaagt-- i dasNov3.JH575209 C 0 C 0 e canFam3.chr16 16054078 0 + 59632846 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e otoGar3.GL873572 5483853 0 - 12253515 C e cebCap1.NW_016107335v1 4918587 26 - 11686629 I a score=288001.000000 s hg38.chrUn_KI270746v1 53893 36 + 66486 catgttggtcaggctggtct----caaacacctgaccttg s panTro5.chr7 156351463 36 + 166211670 catgttggtcaggctggtct----caaacacctgaccttg i panTro5.chr7 C 0 C 0 s panPan2.chr7 155964546 36 + 162613886 catgttggtcaggctggtct----caaacacctgaccttg i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838258 36 + 110113093 catgttggtcaggctggtct----caaacacctgaccttg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454916 36 + 185818997 catgttggtcaggctggtct----caaacacctgaccctg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944642 36 + 192294377 catgttggtcaggctggtct----caaacacctgaccttg i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913255 40 + 15219753 catgttggtcaggctggtctcaaacaaacacctgaccttg i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557418 36 + 11639508 catgttggtcaggctggtct----caaacacctgaccttg i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120408974 36 + 127223203 catgttggtcaggctggtct----caaacacctgaccttg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535303 36 - 2854183 catgttggtcaggctggtct----taaacacctgaccttg i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241837 36 + 27496150 catgttggtcaggctggtct----caaacacctgaccttg i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33694784 36 - 128169293 catgttcgtcagtctggtct----cgaactcctgacctca i calJac3.chr8 I 8 C 0 s saiBol1.JH378140 17031252 36 + 19594188 catgttcatcagttgggtct----cgaactcctgacctca i saiBol1.JH378140 I 8 C 0 s cebCap1.NW_016107335v1 4918613 36 - 11686629 catgttcgtcagtctggtcc----caaactcctgacctca i cebCap1.NW_016107335v1 I 26 C 0 s aotNan1.NW_018506100v1 3267650 36 - 4527795 catgtttgtcagtctggtct----ccaactcctgacctca i aotNan1.NW_018506100v1 I 8 C 0 s dasNov3.JH575209 1225736 10 + 1922530 -----------ggctggctt----c--------------- i dasNov3.JH575209 C 0 C 0 e canFam3.chr16 16054078 0 + 59632846 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e otoGar3.GL873572 5483853 0 - 12253515 C a score=501815.000000 s hg38.chrUn_KI270746v1 53929 63 + 66486 tgatccaccaggcttggcatcccaaagtgctgggattacagatgtgatccaccatggccagcc s panTro5.chr7 156351499 63 + 166211670 tgatccaccagccttggcatcccaaagtgctgggattacagacgtgagccaccacggccagcc i panTro5.chr7 C 0 C 0 s panPan2.chr7 155964582 63 + 162613886 tgatccaccagccttggcatcccaaagtgctgggattacagacgtgagccaccacggccagcc i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838294 63 + 110113093 tgatccaccagccttggcatcccaaagtgctgggattacagacgtgagccaccacagccagcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178454952 63 + 185818997 ggatccaccagccttggcatcccaaagtgctgggattacaatcgtgagccaccacggccagcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944678 63 + 192294377 ggatccaccagccttggcatcccaaagtgctgggattacaatcgtgagccaccacggccagcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913295 63 + 15219753 ggatccaccagccttggcatcccaaagtgctgggattacaatcgtgagccaccacagccagcc i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557454 63 + 11639508 ggatccaccagccttggcatcccaaagtgctgggattacaatcgtgagccaccacggccagcc i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409010 63 + 127223203 ggatccaccagccttggcatcccaaagtgctgggattacaactgtgagccaccacggccagcc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535339 63 - 2854183 ggatccaccagccttggcatcccaaagtgctgggattacaatcttgagccaccacggccagcc i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241873 63 + 27496150 ggatccaccagccttggcatcccaaagtgctgagattacaatcgtgagccaccacggccaccc i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33694820 63 - 128169293 tgatccacccaccttggcctcccaaagtgctgggattacacgcgtgagccaccgtgcccagcc i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17031288 63 + 19594188 tgatccgtccacctcagcctcccaaagtgctgggactacagacgtgggccactgcacccagcc i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4918649 63 - 11686629 tgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagcc i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3267686 63 - 4527795 tgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagcc i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16054078 25 + 59632846 tgattcttcaggtatgg-----------gctcggac--------------------------- i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1225746 0 + 1922530 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e otoGar3.GL873572 5483853 0 - 12253515 C a score=1582126.000000 s hg38.chrUn_KI270746v1 53992 172 + 66486 atgtctggcattttctaactcttcaggtatggccttacata-ttttctcaccag-gagacctttccttagt-gctcccagTGAACCATCATCTCTCTTACCACACCATTAGTG-CCTCTCATTGCATCACCACCTAGGACA----TTTTATTGTTTGTAATTTTATTTAGTGGTAGGCAG s panTro5.chr7 156351562 172 + 166211670 atgtctggcgttttctaacccttcaggtatggccttacata-ttttctcaacag-cagacctttcctTAGT-GCTCCCAGTGAACCATCATCTCTCTTACCACACCATTAGTG-CCTCTCATTGCATCACCACCTAGGACG----TTTTATTGTTTGTAATTTTATTTAGTGGTAGGCAG i panTro5.chr7 C 0 C 0 s panPan2.chr7 155964645 172 + 162613886 atgtctggcgttttctaacccttcaggtatggccttacata-ttttctcaacag-cagacctttcctTAGT-GCTCCCAGTGAACCATCATCTCTCTTACCACACCATTAGTG-CCTCTCATTGCATCACCACCTAGGACG----TTTTATTGTTTGTAATTTTATTTAGTGGTAGGCAG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838357 172 + 110113093 atgtctggcgttttctaacccttcaggtatggccttacata-ttttctcatcaa-gagacctttccttagt-gctcccagtgaatcatcatctctcttaccacaccattagtg-cctcttaTTGCATCACCACCTGGGACA----TTTTATTGTTTATAATTTTATTTAGTGGTAGGCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455015 173 + 185818997 atgtctggcgttttctaacccttcaggtatggccttaaata-ttttctcatcag-gagacctttccttagt-actcccaatgaaccatcatctctcttaccacAACATCAGTACCCTCTCATTCCATCACCACCTGGGACA----TTTTATTGTTTGCAATTGTATTTAGTGGTAGGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944741 173 + 192294377 atgtctggcgttttctaacccttcaggtatggccttaaata-ttttctcatcag-gagacctttccttagt-actcCCAATGAACCATCATCTCTCTTACCACGACATCAGTACCCTCTCATTCCATCACCACCTGGGACA----TTTTATTGTTTGCAATTGTATTTAGTGGTAGGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913358 173 + 15219753 atgtctggcgttttctaacccttcaggtatggccttaaata-ttttctcatcag-gagacctttccttagt-actcccaatgaaccatcatctctcttaccacAACATCAGTACCCTCTCATTCCATCACCACCTGGGACA----TTTTATTGTTTGCAATTGTATTTAGTGGTAGGAAG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557517 173 + 11639508 atgtctggcgttttctaacccttcaggtatggccttaaata-ttttctcatcag-gagacctttccttagt-actcccaatgaaccatcatctctcttaccacAACATTAGTACCCTCTCATTCCATCACCACCTGGGACA----TTTTATTGTTTGCAATTGTATTTAGCGGTAGGAAG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409073 173 + 127223203 atgtctggcgttttctaacccttcaggtatggccttaaata-ttttctcatcag-gagacctttccttagt-actcccaatgaaccatcatctctcttaccacaccATTAGTACCCTCTCATTCCATCACCACCTGGGACA----TTTTATTGTTTGCAATTGTATTTAGTGGTAGGAAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535402 173 - 2854183 atgtctggcattttctaacccttcaggtacggccttaaata-ttttctcatcag-gagacctttccttagt-actcccaatgaaccatcatctctcttaccacAACATTAGTACCCTCTCATTCCATCACCACCTGGGACA----TTTTATTGTTTGCAATTGTATTTAGTGGTAGGAAG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20241936 172 + 27496150 atgtctggcgttttctaacccttcaggtatgaccttaaata-ttttctcatcag-gagacctttccttagt-actcccaatgaaccatcatccctcttaccacaccattagtaccctctcattccatcaccccct-ggacg----ttttattgtttgcaattgtatttaGTGGTAGGAAC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33694883 174 - 128169293 GTATCTGGAGTTTTCTAACCCTTCAGGTATGGACTTAAGTATTTTTCTCATCAC-AATACCTTTCCTTAGT-ACTCCCAATGAACCATTATCTCTCTCATCACATCTTTAGTACCCTCTCTTTGTATCAGCATGTGGAGAG----TTTTATTGTTTGTAATTGTATTTAGTAGCAGGGAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17031351 173 + 19594188 ATATCTGGAGTTTTCGAACCCTTCAGGTATGGCCTTAAATA-TTTTCTCATCAC-AATACCTTTCCTTAGT-ACTCCCAATGAACCATTCTCTCTCTTATCACACCTTTAGTACCCTCTCTTTGTATCAGCACAAGGAACA----TTTTATTGTTTGTAATTTTATTTAGCGGTAGAGAG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4918712 173 - 11686629 GTATCTGGAGTTTTCTAACCCTTCAGATATGGCCTTAAATA-TTTTCTCATCAC-AATACCTTTCCTTAGT-ACTCCCAATGAACCATTATCTCTCTTACCACACCTTTAGTACCCTCTCTTTGTATCAGCACAAGGAGCG----TTTTATTGTTCGTAATTTTATTCAGCGATAGGGAG i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3267749 173 - 4527795 GTATCTGGAGTTTTCTAACTTTTCAGGTATGGCCTTAAATA-TTTTCTCATCAC-AATACCTTTTCTTAGT-ACTCCCAATGAACCATTATCTCTCTTATCACACCTTCAGTACCCTCTCTTTTTATCAGCATGAGGAGCA----TTTTATTGTTTGTAATTTTATTTAGCAGTAGGGAG i aotNan1.NW_018506100v1 C 0 I 27 s otoGar3.GL873572 5483853 172 - 12253515 ATGGCTGCCTTCCTCTGAC-CTTCAGGTATGACCAGCAATA-TTTT-TCATCAG-GAAGCCTTTGATGAATGAATCAAAATGAATCCACATTGCCTGTACATACCTTTCAGTATCTTCTCATTGCATCATGACCCAAGGAC----TTTTATTATTTATAGTTTTGTTTAGTGGTAGTGTG i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16054103 136 + 59632846 ----------------------------------------a-tttctccctcagagatgcctttcttcagc-gctccagctgaactatcatctcccttacaacaTGTTTTGCATCTTCTCACTATTTGAAATTTGGGGTCAGGTGTTCTACTGTTTCTAAT--TATTTATTGGTACAGAA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1225746 150 + 1922530 -----------ttaatgattcttcaggtatggtcttaaata-ttttttcatcagagagaactttccttagc-accccaagtgaaccaccatctccctaaccacacgttaatt--cccttcactgcATCACAGCTGGGGGTC---------------ACAATTTTATTTAGTGGTAGAGAG i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I a score=10336.000000 s hg38.chrUn_KI270746v1 54164 5 + 66486 T--GGGG--- s panTro5.chr7 156351734 5 + 166211670 T--GGGG--- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155964817 5 + 162613886 T--GGGG--- i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838529 6 + 110113093 T-GGGGG--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455188 7 + 185818997 TGGGGAG--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944914 7 + 192294377 TGGGGGG--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913531 7 + 15219753 TGGGGAG--- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557690 7 + 11639508 TGGGGAG--- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409246 7 + 127223203 TGGGGAG--- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535575 7 - 2854183 TGGGGAG--- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20242108 7 + 27496150 TGGGGAG--- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33695057 5 - 128169293 --AGGGG--- i calJac3.chr8 C 0 I 1 s saiBol1.JH378140 17031524 5 + 19594188 --AGGGA--- i saiBol1.JH378140 C 0 I 1 s cebCap1.NW_016107335v1 4918885 5 - 11686629 --AGGGG--- i cebCap1.NW_016107335v1 C 0 I 22 s otoGar3.GL873572 5484025 5 - 12253515 --TGGGG--- i otoGar3.GL873572 C 0 I 1 s canFam3.chr16 16054239 6 + 59632846 TAGGGA---- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1225896 10 + 1922530 TGGGTGGAAG i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e aotNan1.NW_018506100v1 3267922 27 - 4527795 I a score=158840.000000 s hg38.chrUn_KI270746v1 54169 22 + 66486 CAAGAGATACCTAAA-TTACTTC s panTro5.chr7 156351739 22 + 166211670 CAAGAGATACCTAAA-TTACTTC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155964822 22 + 162613886 CAAGAGATACCTAAA-TTACTTC i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838535 22 + 110113093 CAAGAGATATCTAAA-TTACTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455195 23 + 185818997 CAAGAGATATCTAAATTTAGTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944921 23 + 192294377 CAAGAGATATCTAAATTTAGTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913538 23 + 15219753 CAAGAGATATCTAAATTTAGTTC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557697 23 + 11639508 CAAGGGATATCTAAATTTAGTTC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409253 23 + 127223203 CAAGAGATATCTAAATTTAGTTC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535582 23 - 2854183 CAAGAGATATCAAAATTTAGTTC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20242115 23 + 27496150 CAAGAGATATCTAAATTTAGTTC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33695063 21 - 128169293 CAAGACATACCTAAATTTAGT-- i calJac3.chr8 I 1 C 0 s saiBol1.JH378140 17031530 21 + 19594188 CAAGACATATCTAAATTTAGT-- i saiBol1.JH378140 I 1 C 0 s otoGar3.GL873572 5484031 23 - 12253515 CAAGAGATAGCTGAATTTAGTTC i otoGar3.GL873572 I 1 C 0 s canFam3.chr16 16054245 23 + 59632846 CAAAAGATATCTCAATTCAGTTC i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1225906 22 + 1922530 TGAGAGAAATCTAAATTTAGCT- i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e aotNan1.NW_018506100v1 3267922 27 - 4527795 I e cebCap1.NW_016107335v1 4918890 22 - 11686629 I a score=2592460.000000 s hg38.chrUn_KI270746v1 54191 239 + 66486 TCTCAATATTTCCATTGGTTTTTCTCTGAG----ATTTGGCTAACATACATCTTAAATTCTTTTTAGTCAATAGTTTAATATTATGTTGGCAGTAGACAGTTCTA-AAAAATATGAGACAGAAAGTCATACTCTAAGATAAAAATAATGTTGAATAATTTTATTTCAGAAATAAGAATTTTCTGGTAAT--TATGTATTATTCATCATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTATCTCA s panTro5.chr7 156351761 239 + 166211670 TCTCAATATTTCCATTGGTTTTTCTCTGAG----ATTTGGCTAACATACATCTTAAATTCCTTTTAGTCGATAGTTTAATATTATGTTGGCAGTAGAAAGTTCTC-AAAAATATGAGACAGAAAGTCGTACTCTAAGATAAAAATAATGTTGAATAATTTTATTTCAGAAATAAGAATTTTCTGGTAAT--TATGTATTATTCATCATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTATCTCA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155964844 239 + 162613886 TCTCAATATTTCCATTGGTTTTTCTCTGAG----ATTTGGCTAACATACATCTTAAATTCCTTTTAGTCGATAGTTTAATATTATGTTGGCAGTAGAAAGTTCTC-AAAAATATGAGACAGAAAGTCGTACTCTAAGATAAAAATAATGTTGAATAATTTTATTTCAGAAGTAAGAATTTTCTGGTAAT--TATGTCTTATTCATCATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTATCTCA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838557 237 + 110113093 TCTCAATATTTCCATTGGCTTTTCTCTGAG----ATTTGGCTAACATATATCTTAAATTCCTTTTAGTCGATAGTTTAATATTATGTTGGCAGTAGACAGTTCTC-AAAAATATGAAAC--AAAGTCATACTCTAAAATAAAAATAATGTTGAATAATTTTATTTCAGAAATAAGAATTTTCTGGTAAT--TATGTATTATTCATCATGATTTAAAAGTCAGCTTTGATGCCAAAATTTTATCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455218 235 + 185818997 TCTCAATATTTCCGTTGGTTTTTCTCTGAG----ATTTGGCT----TACATCTTAAATTCCTTTTAGTCGATAGTTTAATATTACATTGGCAGTAGACAGTTCTC-AAAAATATGACACAGAAAGTCATACTCTAAGATAAAAATAATGTTGAATAATTTTATTTCAGAAATAGGAATTTTCTGGTAAT--TATGTATTATTCATCATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTCTCTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184944944 235 + 192294377 TCTCAATATTTCCGTTGGTTTTTCTCTGAG----ATTTGGCT----TACATCTTAAATTCCTTTTAGTCGATAGTTTAATATTACATTGGCAGTAGACAGTTCTC-AAAAATATGACACAGAAAGTCATACTCTAAGATAAAAATAATGTTGAATAATTTTATTTCAGAAATAGGAATTTTCTGGTAAT--TATGTATTATTCATCATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTCTCTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913561 235 + 15219753 TCTCAATATTTCCGTTGGTTTTTCTCTGAG----ATTTGGCT----TACATCTTAAATTCCTTTTAGTCGATAGTTTAATATTACATTGGCAGTAGACAGTTCTC-AAAAATATGACACAGAAAGTCATACTCTAAGATAAAAATAATGTTGAATAATTTTATTTCAGAAATAGGAATTTTCTGGTAAT--TATGTATTATTCATCATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTCTCTCA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557720 235 + 11639508 TCTCAATATTTCCGTTGGTTTTTCTCTGAG----ATTTGGCT----TACATCTTAAATTCCTTTTAGTCGATAGTTTAATATTACATTGGCAGCAGACAGTTCTC-AAAAATATGACACAGAAAGTCATACTCTAAGATAAAAATAATGTTGAATAATTTTATTTCAGAAATAGGAATTTTCTGGTAAT--TATGTATTATTCATCATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTCTCTCA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409276 235 + 127223203 TCTCAATATTTCCGTTGGTTTTTCTCTGAG----ATTTGGCT----TACATCTTAAATTCTTTTTAGTCGATAGCTTAATATTACATTGGCAGTAGACAGTTCTC-AAAAATATGACACAGAAAGTCATACTCTAAGATAAAAATAATGTTGAATAATTTTATTTCAGAAATAGGAATTTTCTGGTAAT--TATGTATTATTCATCATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTCTCTCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535605 235 - 2854183 TCTCAATATTTCCGTTGGTTTTTCTCTGAG----ATTTGGCT----TACATCTTAAATTCCTTTTAGTCGATAGTTTAATATTACATTGGCAGTAGACAGTTCTC-AAAAATATGACACAGAAAGTCATACTCTAAGATAAAAATAATGTTGAATAATTTTATTTCAGAAATAGGAATTTTCTGGTAAT--TATGTATTATTCATCATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTCTCTCA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20242138 235 + 27496150 TCTCAATATTTCCACTGGTTTTTCTCTGAG----ATTGGGCT----TACATCTTAAATTCCTTTTAGTCGATAGTTTAATATTACGTTGGCAGTAGACAGGTGTC-AAAAATATAACACAGAAAGTCATACTCTAAGATAAAAATAATGTTGAATAATTTTATTTCAAAAATAGGAATTTTCTGGTAAT--TATGTGTTATTCATTATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTCTCTCA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33695084 239 - 128169293 TTTCAATATTTCCATTGGTGTTTCTCTGAG----ATTTGGCTAACATACATCTTACATTCCTTTTAGTGGACAGTTTAATATTATGTTCGCAGTAAACACTTCTC-AAAAATATGCCACAGAAAGTCATACTCTAAGATAAAAATAATACTGAATAATTTTATTCCAGAAATAAGAATTTTCTGGTGAT--TATGTATTATTCATCATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTATCTCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17031551 239 + 19594188 TCTCAGTATTTCCATTGGTTTTTCTCTGAG----ATTTGGCTAACATACATCTTACATTCCTTTTAGTGGACAGTTTAATATTATGTTCGCAGTAAACAGTTCTC-AAAAATATGCCATAGAAAGTCATACTCTAAGataaaaataatattgaataattttatttCAGAAATAAGAATTTTCTGGTAAT--TATGTATTATTCATCATAATTTAAAAGTTAGGTTTGATACCAAAATTTTATCTCA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4918912 239 - 11686629 TCTCAATATTTCCATTGGTTTTTCTCTGAG----ATTTGGCTAACATACATCTTACATTCCTTTTAGTGGACAGTTTAATATTATGTTCGCAGTAAACAGTTCTC-AAAAATATGCCACAGAAAGTCATACTCTAAGATAAAAATAATATTGAATAATTTTATTTGAGAAATAAGAATTTTCTGGTAAT--TATGTATTATTCATCATAATTTAAAAGTTAGGTTTGATACCAAAATTTTATCTCA i cebCap1.NW_016107335v1 I 22 I 194 s aotNan1.NW_018506100v1 3267949 239 - 4527795 TCTCAATATTTCCATTGGTTTTTCTCTGAG----ATTTGGCTAACATACATCTTAAATTCCTTTTAGTGGACAGTTTAATATTATGTTTGCAGTAAACAGTTCTC-AAAAATATGCCATAGAAAGTCACGCTCTAAGATAAAAATAATATTGAATAATTTTATTTCAGAAATTCGAATTTTCTGGTAAT--TATGTATTATTCATCATAATTTAAAAGTTAGCTTTGATGCCAAAATTTTATCTCA i aotNan1.NW_018506100v1 I 27 I 194 s otoGar3.GL873572 5484054 236 - 12253515 TCTCAGTATTTCCACTGGTTGTTCTCTGAGGAT-ATTTGGCTAGTGTACACCTCAAATTCCTTTTGGTAGATTGTTTAATGTTATGT---CAGTAGACAGTTCTC--AAAGCATACCAC--AAAATCATAATCTAAGATAAAAATAAAACTGAATAATTTTGTTTCAAAAATAGGAATTTTTTGGTTATTATATGTATTATTCATAAT--TTTAAAAGTGAGCTTTAATGCCAAAAATGTATCTCA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16054268 186 + 59632846 TCTCAATACTTCCACTGGCTTTTCTCTGACAAT-ATTTGGCTACTGCATA----AACTTCCTTTTGGTGGATCACTTAATGTTATGT---CAGTAGACAGCTCTTAAAAAAAATACTATAAAAAGTCATACTCTCAGATAA--------------------------------------------------TATG--TTATTCACCATAATTTAAAAGCTAGCTTTGATGCCAAAATCGTGTCTCA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1225928 234 + 1922530 TTCTAATACTTCCACTGGATTTCCTCTGAGCCTAGTTGGGCTAGTGTACATCTTAAATTCCTTTTGGTAGACCATTTAATGTTATGT---CAGTAGACAGGTCTC--AAAATATACCAT--AAAGCTGAACTCTAAGGTAA-AATAACAGTGAATTGTTTTATTTCCAAAATAAGA--TTTTTTGTGAT--TATGTATTATTCATCACAATTTCAAAGTTAGTTTTGATGCCAAAATTGTACTTCA i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I a score=64634.000000 s hg38.chrUn_KI270746v1 54430 7 + 66486 CTTTGAA s panTro5.chr7 156352000 7 + 166211670 CTTCAAA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155965083 7 + 162613886 CTTCAAA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838794 7 + 110113093 CTTCAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455453 7 + 185818997 TTTCAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184945179 7 + 192294377 TTTCAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913796 7 + 15219753 TTTCAAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557955 7 + 11639508 TTTCAAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409511 7 + 127223203 TTTCAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535840 7 - 2854183 TTTCAAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20242373 7 + 27496150 TTTCAAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33695323 7 - 128169293 TTTCGAA i calJac3.chr8 C 0 I 182 s saiBol1.JH378140 17031790 7 + 19594188 TTTCAAA i saiBol1.JH378140 C 0 I 181 s otoGar3.GL873572 5484290 7 - 12253515 TTTCAAA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16054454 7 + 59632846 TTTTAAA i canFam3.chr16 C 0 I 179 s dasNov3.JH575209 1226162 7 + 1922530 TTTCAAA i dasNov3.JH575209 C 0 I 17 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 87148 2085 + 204143 I e aotNan1.NW_018506100v1 3268188 194 - 4527795 I e cebCap1.NW_016107335v1 4919151 194 - 11686629 I a score=24768.000000 s hg38.chrUn_KI270746v1 54437 3 + 66486 AAG s panTro5.chr7 156352007 3 + 166211670 AAG i panTro5.chr7 C 0 C 0 s panPan2.chr7 155965090 3 + 162613886 AAG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838801 3 + 110113093 AAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455460 3 + 185818997 AAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184945186 3 + 192294377 AAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913803 3 + 15219753 AAG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557962 3 + 11639508 AAG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409518 3 + 127223203 AAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535847 3 - 2854183 AAG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20242380 3 + 27496150 AAG i colAng1.NW_012115154v1 C 0 C 0 s tarSyr2.KE936121v1 89233 3 + 204143 AAG i tarSyr2.KE936121v1 I 2085 I 5669 s otoGar3.GL873572 5484297 3 - 12253515 AAG i otoGar3.GL873572 C 0 I 176 s canFam3.chr16 16054640 3 + 59632846 AAG i canFam3.chr16 I 179 C 0 s dasNov3.JH575209 1226186 3 + 1922530 AAA i dasNov3.JH575209 I 17 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e aotNan1.NW_018506100v1 3268188 194 - 4527795 I e cebCap1.NW_016107335v1 4919151 194 - 11686629 I e saiBol1.JH378140 17031797 181 + 19594188 I e calJac3.chr8 33695330 182 - 128169293 I a score=23246.000000 s hg38.chrUn_KI270746v1 54440 4 + 66486 A---CAG s panTro5.chr7 156352010 7 + 166211670 AAGACAG i panTro5.chr7 C 0 C 0 s panPan2.chr7 155965093 7 + 162613886 AAGACAG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838804 7 + 110113093 AAGACAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455463 7 + 185818997 AAGACAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184945189 7 + 192294377 AAGACAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913806 7 + 15219753 AAGACAG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557965 7 + 11639508 AAGACAG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409521 7 + 127223203 AAGACAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535850 7 - 2854183 AAGACAG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20242383 7 + 27496150 AAGACAG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33695512 5 - 128169293 AAGAC-- i calJac3.chr8 I 182 C 0 s saiBol1.JH378140 17031978 5 + 19594188 AAGAC-- i saiBol1.JH378140 I 181 C 0 s otoGar3.GL873572 5484476 3 - 12253515 AAG---- i otoGar3.GL873572 I 176 C 0 s canFam3.chr16 16054643 4 + 59632846 ---ATAG i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1226189 4 + 1922530 ---ACAT i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e aotNan1.NW_018506100v1 3268188 194 - 4527795 I e cebCap1.NW_016107335v1 4919151 194 - 11686629 I a score=25022.000000 s hg38.chrUn_KI270746v1 54444 2 + 66486 AC s panTro5.chr7 156352017 2 + 166211670 AC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155965100 2 + 162613886 AC i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838811 2 + 110113093 AC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455470 2 + 185818997 AC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184945196 2 + 192294377 AC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913813 2 + 15219753 AC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557972 2 + 11639508 AC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409528 2 + 127223203 AC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535857 2 - 2854183 AC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20242390 2 + 27496150 AC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33695517 2 - 128169293 AC i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17031983 2 + 19594188 AC i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4919345 2 - 11686629 AC i cebCap1.NW_016107335v1 I 194 C 0 s aotNan1.NW_018506100v1 3268382 2 - 4527795 AC i aotNan1.NW_018506100v1 I 194 C 0 s otoGar3.GL873572 5484479 2 - 12253515 AT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16054647 2 + 59632846 AT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1226193 2 + 1922530 AC i dasNov3.JH575209 C 0 I 101 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=3655856.000000 s hg38.chrUn_KI270746v1 54446 400 + 66486 TTTGTGTAATT---TTATAGT-TCT----------------------------------------GAAGAAAAATTATCATTATACTTAGATATTCTGAC-------AAATTATCTAGTATATTCCTTAGACCTTAAAACTAAAATATAG---CTATAATTATCAAAGTT------TAAATTATCCTTCAGATCTTAGCTTTGATC---AAGAA---TTTACACAAACCATTCAGAAAAGGTTACCTGCCCCTGTAATGTATGGGCTCTTC-T---CCTACA------ATCCAGTTG----CAGCACTTTTT-------------ACA-CTGTAATT------------------------------------AAAGATCATGC-----------CCCTTTCTGTCCACTGCTACGTT--AAGCACACTGTTCAGCACTTACTGAAC-------TTTTTTTCTGCTGAGCATCTATTATCTTTTTTTGC--ATGTGTGTATGAATTCATCAATAAACAATGAGCTATGATATGAAACACACTAATGCCTCCA s panTro5.chr7 156352019 400 + 166211670 TTTGTGTAATT---TTATAGT-TCT----------------------------------------GAAGAAAAATTATCATTACACTTAGATATTCTGAC-------AAATTATCTAGTATATTCCTTAGACCTTAAAACTAAAATATAG---CTATAATTACCAAAGTT------TAAATTATCCTTCAGATCTTAGCTTTGATC---AAGAA---CTTACACAAACCATTCAGAAAAGGTTAGCTGCCCCTGTAATGTATGGGCTCTTC-T---CCTACA------ATCCAGTTG----CAGCACTTTTC-------------ACA-CTGTAATT------------------------------------AAAGATCATGC-----------CCCTTTCTGTTCACTGCTATGTT--AAGCAACCTGTTCAGCACTTATTGAAC-------TTTTTTTCTGCTGAGCATCTATTATCTTTTTTTGC--ATATGTGTATGAATTCATCAATAAACAATGAACTATGATATGAAACACACTAATGCCTCCA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155965102 400 + 162613886 TTTGTGTAATT---TTATAGT-TCT----------------------------------------GAAGAAAAATTATCATTATACTTAGATATTCTGAC-------AAATTATCTAGTATATTCCTTAGACCTTAAAACTAAAATATAG---CTATAATTACCAAAGTT------TAAATTATCCTTCAGATCTTAGCTTTGATC---AAGAA---CTTACACAAACCATTCAGAAAAGGTTAGCTGCCCCTGTAATGTATGGGCTCTTC-T---CCTACA------ATCCAGTTG----CAGCACTTTTC-------------ACA-CTGTAATT------------------------------------AAAGATCATGC-----------CCCTTTCTGTTCACTGCTATGTT--AAGCAACCTGTTCAGCACTTATTGAAC-------TTTTTTTCTGCTGAGCATCTATTATCTTTTTTTGC--ATATGTGTATGAATTCATCAATAAACAATGAACTATGATATGAAACACACTAATGCCTCCA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102838813 397 + 110113093 TTTGTGTAATT---TTATAGT-TCT----------------------------------------GAAGAAAAATTATCATTATACTTAGATATTCTGAC-------AAATTATCTAGTATATTCCTTAGACCTTAAAACTAAAATATAG---CTATAATTATCAAAGTT------TAAATTATCCTTCAGATCTTAGCTTTGATC---AAGAA---CTTACACAAACCATTCAGAAAAGGTTAGCTGCCCCTGTAATATG-GGGCTCTTC-T---CCTACA------ATCCAGTTG----CAGCACTTTTT-------------ACA-CTGTAATT------------------------------------AAAGATCATGC-----------CCCTTTCTGTTCACTGCTATGTT--AAGCACCCTGTTCAGCACTTATTGAAC-------TTTTTTTCTGCTGAGCATCTATTATCTTTTTTTGC--A--TGTGTATGAATTCATCAATAAACAATGAACTATGATATGAAACACACTAATGCCTCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455472 389 + 185818997 TTTGTGTAATT---TTATAGT-TCT----------------------------------------GAAGAAAAATTATCATTATACTT-GATATTCTGAC-------AAATTATCTAGTATATTCCTTAGACCTTAAAACTAAAATATAG---CTATAATTATCAAAGTT------TAAATTGTCCTTCAGATCTTAGCTTTGATC---AAGAA---CTTAC----ACCATTCAGAAAAGGTTAGCTGCCCCTATAATATATGGGCTCTCC-T---CCTACA------ATC----------CAGCACTTTCT-------------ATA-CTGTAATT------------------------------------GAAGATCATGC-----------TCCTTTCTGTTCAGTGCTATGTT--AAGCACTCTGTTCAGCACTTACTGAAC-------TTTTTTTCTGCTCAGCATCTATTGTCTCTTTTTCC--ATCTGTGTATGAATTCATCAATAAACAATGAACTATGACATGAAATACACTAATGCCTCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184945198 389 + 192294377 TTTGTGTAATT---TTATAGT-TCT----------------------------------------GAAGAAAAATTATCATTATACTT-GATATTCTGAC-------AAATTATCTAGTATATTCCTTAGACCTTAAAACTAAAATATAG---CTATAATTATCAAAGTT------TAAATTGTCCTTCAGATCTTAGCTTTGATC---AAGAA---CTTAC----ACCATTCAGAAAAGGTTAGCCGCCCCTATAATATATGGGCTCTCC-T---CCCACA------ATC----------CAGCACTTTCT-------------ATA-CTGTAATT------------------------------------GAAGATCATGC-----------TCCTTTCTGTTCAGTGCTATGTT--AAGCACTCTGTTCAGCACTTACTGAAC-------TTTTTTTCTGCTCAGGATCTATTGTCTCTTTTTGC--ATCTGTGTATGAATTCATCAATAAACAATGAACTATGACATGAAATACACTAATGCCTCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7913815 389 + 15219753 TTTGTGTAATT---TTATAGT-TCT----------------------------------------GAAGAAAAATTATCATTATACTT-GATATTCTGAC-------AAATTATCTAGTATATTCCTTAGACCTTAAAACTAAAATATAG---CTATAATTATCAAAGTT------TAAATTGTCCTTCAGATCTTAGCTTTGATC---AAGAA---CTTAC----ACCATTCAGAAAAGGTTAGCTGCCCCTATAATATATGGGCTCTCC-T---CCTACA------ATC----------CAGCACTTTCT-------------ATA-CTGTAATT------------------------------------GAAGATCATGC-----------TCCTTTCTGTTCAGTGCTATGTT--AAGCACTCTGTTCAGCACTTACTGAAC-------TTTTTTTCTGCTCAGCATCTATTGTCTCTTTTTGC--ATCTGTGTATGAATTCATCAATAAACAATGAACTATGACATGAAATACACTAATGCCTCCA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9557974 389 + 11639508 TTTGTGTAATT---TTATAGT-TCT----------------------------------------GAAGAAAAATTATCATTATACTT-GATATTCTGAC-------AAATTACCTAGTATATTCCTTAGACCTTAAAACTAAAATATAG---CTATAATTATCAAAGCT------TAAATTGTCCTTCAGATCTTAGCTTTGATC---AAGAA---CTTAC----ACCATTCAGAAAAGGTTAGCTGCCCCTGTAATATATGGGCTCTCC-T---CCTACA------ATC----------CAGCACTTTCT-------------ATA-CTGTAATT------------------------------------GAAGATCATGC-----------TCCTTTCTGTTCAGTGCTGTGTT--AAGCACTCTGTTCAGCACTTACTGAAT-------TTTTTTTCTGCTCAGCATCTATTGTCTCTTTTTGC--ATCTGTGTATGAATTCATCAATAAACAATGAACTATGACATGAAATACACTAATGCCTCCA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409530 392 + 127223203 TTTGTGTAATT---TTATAGT-TCT----------------------------------------GAAGAAAAATTATCATTATACTTAGATATTCTGAC-------AAATTGTCTAGTATATTCCTTAGACCTTAAAACTAAAATATAG---CTATAATTATCAAAGTT------TAAATTGTCCTTCAGATCTTAGCTTTGATC---AAGAA---CTTAC----ACCATTCAGAAAAGGTTAGCTGCCCCTATAATATATGGGCTCTCC-T---CCTACA------ATC----------CAGCACTTTCT-------------ATA-CTGTAATT------------------------------------AAAGATCATGC-----------TCCTTTCTGTTCACTGCTATGTTAAAAGCACTCTGTTCAGCACTTACTGAAC-------TTTTTTTCTGCTCAGCATCTATTATCTCTTTTTGC--ATATGTGTATGAATTCATCAATAAACAATGAACTATGATATGAAATACACTAATGCCTCCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1535859 389 - 2854183 TTTGTGTAATT---TTATAGT-TCT----------------------------------------GAAGAAAAATTATCATTATACTT-GATATTCTGAC-------AAATTATCTAGTATATTCCTTAGACCTTAAAACTAAAATATAG---CTATAATTATCAAAGCT------TAAATTGTCCTTCAGATCTGAGCTTTGATC---AAGAA---CTTAC----ACCATTCAGAAAAGGTTAGCTGCCCCTGTAATATATGGGCTCTCC-T---CCTACA------ATC----------CAGCACTTTCT-------------CTA-CTGTAATT------------------------------------GAAGATCATGC-----------TCCTTTCTGTTCAGTGCTGTGTT--AAGCACTCTGTTCAGCACTTACTGAAC-------TTTTCTTCTGCTCAGCATCTATTGTCTCTTTTTGC--ATCTGTGTATGAATTCATCAATAAACAATGAACTATGACATGAAATACACTAATGCCTCCA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20242392 390 + 27496150 TTTGTGTAATT---TTATAGT-TCT----------------------------------------GAAGAAAAACTATCATTATACTTAGATATTCTGAC-------AAATTATCTAGTATATTCCTTAGACCTTAAAACTAAAATATAG---CTATAATTATCAAAGTT------TAAATTGTCCTTCAGATCTTAGCTTTGATC---AAGAA---CTTAC----ACTATTCAGAAAAGGTTAGCTGCCCCTATAATATATGGGCTCTCC-T---CCTACA------ATC----------CAGCACTTTCT-------------ATA-CTGTAATT------------------------------------AAAGATCATGC-----------TCCTTTCTGTTCACTGCTATGTT--AAGCACTCTGTTCAGCACTTACTGAAC-------TTTTTTTCTGCTCAGCATCTATTATCTTTTTTTGC--GTATGTGTATGAATTCATCAATAAACAATGAACTATGATATGAAATACACTAATGCCTCCA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33695519 381 - 128169293 TTTGTGTAATT---TTATAGT-ACT----------------------------------------GAAGAAAAATTATC---ATACTTAGATATTTTGAC-------AAAT----TAGTATATTCCTTATACCTTAAGATTAAAATACAG---CTATAATTATCAAAGTT------TAAATTATCCTTCAGATCTTAGCTTTGATC---AAGAA---CTTACACAAACCATTCAGAAAAGGTTAGCTGTCCCTGTAATATATGGACTCTCC-T---CCTACA------TTCCTGTTG----CAGCACTTTTT-------------ACA-GTGTAATT------------------------------------AAAGACCATCC-----------CTCTT------------TATGTT--AAGTACCCTGTTCAGCACTTACTGAAC-------TTTTTT-CTGCTGAGCATCTATTATCT-TTTTTGCATATATATATATGAATTCATCAATAAACATCATACTATGATATGAAATACACTAATGTCTCCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17031985 355 + 19594188 TTTGTGTAATT---TTATAGT-ACT----------------------------------------GAAGAAAAATTATCATTATACTTAGATATTTTGAC-------AAATTATCTAGTATATTCCTTACACCTTAAGATTAAAATACAG---CTATAATTATCAAAGTT------TAAATTATCCTTCAGATCTTAGCTTTGATC---AAGAAG--AACACAAAAACCATTCAGAAAAGGTTAGCTGTCCCTGTAATATATGGGCTCTCC-T---CCTACA------TTACTGTTG----CAGCACTTTGC-------------ACA-CTGTAATT------------------------------------AAAGACCATCT-----------CTCTT------------TATGTT--ATGCACCCTGTTCAGCCCTTAGTGAAC-------TTTTTTCCTGCTGAGCATCTATTATCT-TTTTTGC--ATATATGTATGAATTCATCAATAAACAC--------------------------------- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4919347 390 - 11686629 TTTGTGTAATT---TTATAGT-ACT----------------------------------------GAAGAAAAATTATCATTATACTTAGATATTTTGAC-------AAATTATCTAGTATATTCCTTACACCTTAAGATTAAAATACAG---CTATAATTATCAAAGTT------TAAATTATCCTGCAGATCTTAGCTTTGATC---AAGAAGAACTTACACAAACCATTCAGAAAAGGTTAGCTGTCCCTGTAATATATGGGCTCTCC-T---CCTACA------TTCCTGTTG----CAGCACTTTTT-------------ACA-CTGTAATT------------------------------------AAAGACCATCC-----------CTCTT------------TATGTT--AAGCACCCTGTTCAGCACTTATTGAAC-------ATTTTTTCTGCTGAGCATCTATTATCT-TTTTTGC--ATATATGTATGAATTCATCAATAAACATCGTACTATGATACGAAATACACTAATGCCTCCA i cebCap1.NW_016107335v1 C 0 I 8 s aotNan1.NW_018506100v1 3268384 391 - 4527795 TTTATGTAATT---TTATAGT-ACT----------------------------------------GAAGAAAAATTATCATTATACTTAGATATTTTGAC-------AAATTATCTAGTATATTCCTTACACCTTAAGATTAAAATACAG---CTATAATTACCAGAGTT------TAAATTATCCTTGAGATCTTAGCTTTGATC---AAGAAGAACTTACACAAACCATTCAGAAACGGTTAGCTGTCCCTGTAATATATGGGCTCTCC-T---CCTACA------TTCCTGTTG----CAGCACTTTTT-------------ACA-CTGTAATT-----------------------------------AAAAGACCATCC-----------CTCTT------------TATGTT--AAGCACCCTGTTCAGCACTTATTGAAC-------TTTGTTTCTGCTGAGCATCTATTATCT-TTTTTGC--ATATATGTATGAATTCATCAATAAACATCGTACTATGTTATGAAATACACTAATGCCTCCA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5484481 444 - 12253515 TATGTGCAATT---TTACAGG-ACT----------------------------------------GAAG-AAAATTATGATTATACTTAGATATTTTGACAAGAAAGAAATTACTTAATATATTCTTTAGACATTAAAACTAAAATACAG---CTGTAATTACCAGAGCTTAGTTATAAATTATCCTACAGATGTCATTTTTGATCCAAAAGAA---CTTATACAAACCATTCAGAAAAGGCTGTTTGCACCTGTAATAGACTTGCTCTCCTT---CCAACA------ACTCTCCTGGACTTATCACTCTGTTAATCACCTGCTGCCA-TTGGACTT------------------------------------ATAAGCAATATGAGAAGGCAAAATCTTTGTGTTCGTTGTTGTGTT--ATGCACTCTGTTTAGCACTTACCAAACATCTA--TTCTTTTCCACCAAGCATCTATTACC--TTTTTGC--ATGCATGCATGAATTCACCAATAAATACTGTGCCAAGCTATGAAATATATTAATCCCT--- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16054649 424 + 59632846 TGTGTGCAATT---TTATAGGAACT----------------------------------------GGAGAAAAATTATGATTATACTTAGATGTTTTGACAATGAAGAAATTACCTAATATATTCTTTAGACTT------TAAAATACAG---CTATAATTATCAACTTT-AGTTATAAATTATCCTACAGATCTCAGCTTTGATGAAAAAGAA---TTTATACAGACAATTCAGA---GGTCAGCTCCC------AAATACCGAAACATG-G---TTTACA------CTATTGTTGAAC-TTATACTTGCT-------------ACA-TTTGGATTTATTTGTTGccattgg--actagaagcttga---gaagagaccattc-----------t------tgttcactgctatgtt--aagcattctattcaaggcttATTGAATGCCTGGTTTTTTTCCCACTGGGCATTTTTTTT---TTTTTGG--A----TGCAAAAATGCATCAATAAGCATTGTACT-----ATGAAACATACTAATTGCCCCA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1226296 453 + 1922530 CTTGGATAATTACATTATGAA-TTTTAATTAGCATATCTTAAGACATTGGAAGAAAGATTATATAGAAGAAAAATTATGAGTATACTTAGTTATT-TGACAAAGAAGAAATGAGCTAA-----TCTTTGTATCTTAAAAC-AAAATACAGGTTTTTTAAAAATCAAAATTTGGTTATAACTCATCCTTTAGATCTTGACTTTGATC---AAAAATAACTTAT-CAGACCACTCAGATGAGGGCAGTTTCACAAGTTATA-ATGTGCTCCCC-TATCCCAACATGGTTTACCCTACTA----TAGCACTTACT-------------ACATTTGTAATT-----------ATTTGTTTCCCTAAGCTTGATATAAagagaccaaac-----------ctgttt-tgttcactgctatgtt--aagcattctgttcagtacttattaagc-----------------------acccattatcttttattgc--a--------tgaaCACAATAATAAGCAATAAACAATGGTATAGAATATACA---------- i dasNov3.JH575209 I 101 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=202387.000000 s hg38.chrUn_KI270746v1 54846 49 + 66486 CCAGTAATAACCT--AGAATCTTGA-ATTTCTTCACTTAAAAAAAAGTTACT- s panTro5.chr7 156352419 49 + 166211670 CCAGTAATAACCT--AGAATCTTGA-ATTTCTTCACTTAAAAAAAAGTTACT- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155965502 49 + 162613886 CCAGTAATAACCT--AGAATCTTGA-ATTTCTTCACTTAAAAAAAAGTTACT- i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102839210 47 + 110113093 CCAGTAATAACCT--AGAATCTTGA-ATTTCTTCACTT--AAAAAAGTTACT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455861 47 + 185818997 CCAGTAATAACCT--AGAATTTTGA-ATTTTTTCACTT--ATAAAAGTTACT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184945587 47 + 192294377 CCAGTAATAACCT--AGAATTTTGA-AATTTTTCACTT--ATAAAAGTTACT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7914204 47 + 15219753 CCAGTAATAACCC--AGAATTTTGA-ATTTTTTCACTT--TTAAAAGTTACT- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9558363 47 + 11639508 CCAGTAATAACCT--AGAATTTTGA-ATTTTTTCACTT--ATAAAAGTTACT- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409922 47 + 127223203 CCAGTAATAACCT--AGAAATTTGA-ATTTCTTCACTT--ACAAAAGTTACT- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1536248 47 - 2854183 CCAGCAATAACCT--AGAATTTTGA-ATTTTTTCACTT--ATAAAAGTTACT- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20242782 47 + 27496150 CCAGTAATAACCT--AGAATTTTGA-ATTTCTTCACTT--ATAAAAGTTACT- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33695900 18 - 128169293 ---------------------------CTTTTT-------TAAAAAGTTGCT- i calJac3.chr8 C 0 C 0 s aotNan1.NW_018506100v1 3268775 18 - 4527795 ---------------------------CTTTTT-------TAAAAAGTTACT- i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5484925 50 - 12253515 CTAGGTATAGCCTAGAGAATCTTGG-ATTTCTTCACCTA-TAAAAAAATACT- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16055073 40 + 59632846 TCAGATAAAGCCT--ACATTCTTGC-CTTTTCTCACCG--AAAAA-------- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1226749 50 + 1922530 TCAGTTTTTGCCC--TGATTCTTGGTTTTTCCTTACCTA-TAAGAAATTATCT i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e cebCap1.NW_016107335v1 4919737 8 - 11686629 I e saiBol1.JH378140 17032340 0 + 19594188 C a score=139191.000000 s hg38.chrUn_KI270746v1 54895 34 + 66486 ----------AAAAATTACT-----AAAAAATCTATA---------------------------------------------------------------------------------TAATGCC------------TCCTT s panTro5.chr7 156352468 24 + 166211670 ----------AAAAA---------------ATCTATA---------------------------------------------------------------------------------TAATGCC------------TCCTT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155965551 24 + 162613886 ----------AAAAA---------------ATCTATA---------------------------------------------------------------------------------TAATGCC------------TCCTT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102839257 36 + 110113093 ----------AAAAATTACT---AAAAAAAAACTATA---------------------------------------------------------------------------------TAATGCC------------TCCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455908 39 + 185818997 ----------AAAAATTACTAAAAAAAAAAATCTATA---------------------------------------------------------------------------------TAATGCC------------CCCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184945634 39 + 192294377 ----------AAAAATTACTAAAAAAAAAAATCTATA---------------------------------------------------------------------------------TAATGCC------------CCCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7914251 38 + 15219753 ----------AAAAATTACT-AAAAAAAAAACCTATA---------------------------------------------------------------------------------TAATGCC------------CCCTT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9558410 37 + 11639508 ----------AAAAATTACT--TAAAAAAAATCTATA---------------------------------------------------------------------------------TAATGCC------------CCCTT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120409969 36 + 127223203 ----------AAAAATTACT---AAAAAAAATCTATA---------------------------------------------------------------------------------TAATGCC------------TCCTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1536295 37 - 2854183 ----------AAAAATTACT--AAAAAAAAATCTATA---------------------------------------------------------------------------------TAATGCC------------CCCTT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20242829 36 + 27496150 ----------AAAAATTACT---AAAAAAAATCTATA---------------------------------------------------------------------------------TACTGCC------------CCCTT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33695918 34 - 128169293 ----------AAAAATTACT-----AAAAAGTCTATA---------------------------------------------------------------------------------CAATGCC------------CTCTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17032340 18 + 19594188 -------------------------------TGTATA---------------------------------------------------------------------------------CAATGCC------------CTCTT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4919745 34 - 11686629 ----------AAAAGTTACT-----AAAAAGTCTATA---------------------------------------------------------------------------------CAATGCC------------CTCTT i cebCap1.NW_016107335v1 I 8 C 0 s aotNan1.NW_018506100v1 3268793 34 - 4527795 ----------AAAAATTACT-----AAAAATTCTATA---------------------------------------------------------------------------------CAATGCC------------CTCTT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5484975 32 - 12253515 -----------------------------GATTTATC---------------------------------------------------------------------------------CAAAGCCCTCAGACTTTTACTCTT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16055113 30 + 59632846 ----------AGAAATTACC---------AATCCATC---------------------------------------------------------------------------------CAATGTA------------CTTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1226799 125 + 1922530 ATCAAATGCATGATATTGTT-----AAACTATCTACAAGGTGAATTAAAAACAAAAGGATTgggaagcagctgtggctcaatcgattaggctcctgtctaccataagggttcgcatcccagggcc------------tcctt i dasNov3.JH575209 C 0 I 131 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=6159872.000000 s hg38.chrUn_KI270746v1 54929 614 + 66486 A----ATCT----AC--------------------------AAACTGAATTAAAAGCAAAATAG--TTCCTAATGTAATCATTAT-----TA-------------------AGTTGTAAATAGAATCAACTTGCTAT---CAAATACTACAGAAACT-----AAAAAAAC--ACTACCTGGCAGGGACTGAATTTGAACCCAAGAAAAATAATTTAA-CCCAAAA-------------ATAGTTTAATATTAGCATTAAGTTTCTTTCTGCTTTGAGGCCAATTTCTCAGGTAAACTGTCCAAGCTAGTAAGTTAT---------AC----------AAGGACTGTGGGATGGGGAAATGAGAACAATAATGACAAGTTGAGGATAGGCTA-T--TTAGAAGCAACTTTCTAT---TAAAAGTC----AAATTCTATTGCTGATTGTTAAATATGATCAAAGTCATTCTTACAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAGCAGCCATAG-AAGGTTTGGTGTCTCAAAGGCAAACTTTACACCTCCAA---ATCTTAAATCAACCCCGGCACCACACTCTTCCAACATACTATGTAAAACCAAGGTTGCTTATAAACAGTAAGTCTAATTTA---GGAAAAGTGAAAGCAATGAAG--ACAGAGGGCAGAAAGGAAGATAACTGGTAAAAGAAACAAAAGAGTTTACAGTTTGT-----CTTTTTGGT-AAATATAATCACT s panTro5.chr7 156352492 614 + 166211670 A----ATCT----AC--------------------------AAACTGAATTAAAAGCAAAATAG--TTCCTAATGTAATCATTAT-----TA-------------------AGTTGTAAATAGAATCAACTTGCTAT---CAAATACTACAGAAACT-----AAAAAAAC--ACTACCTGGCAGGGACTGAATTTGAACCCAAGAAAAATAATTTAA-CCCAAAA-------------ATAGTTTAATATTAGCATTAAGTTTCTTTCTGTTTTGAGGCCAATTTCTCAGGTAAACTGTCCAAGCTAGTAAGTTAT---------AC----------AAGGACTGTGGGATGGGGAAATGAGAACAATAATGACACATGGAGGATAGGCTA-T--TTAGAAGCAACTTTCTAT---TAAAAGTC----AAATTCTATTGCTGGTTGTTAAATATGATCAAAGTCACTCTTACAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAGTAGCCAGAG-AAGGTTTGGTGTCTCACTGGCAAACTTTACACCTCCAA---ATCCTAAATCAACCCCAGCCCCACACTCTTCCAACATACTATGTAAAACCAAGGTTGCTTATAAACAGTAAGTCTAATTTA---GGAAAAGTGAAAGCAATGAAG--AGAGAGAGCAGAAAGGAAGATAACTGGTAAAAGAAACAAAAGAGTTTACAGTTTGT-----CTTTTTGGT-AAATATAATCACT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155965575 614 + 162613886 A----ATCT----AC--------------------------AAACTGAATTAAAAGCAAAATAG--TTCCTAATGTAATCATTAT-----TA-------------------AGTTGTAAATAGAATCAACTTGCTAT---CAAATACTACAGAAACT-----AAAAAAAC--ACTACCTGGCAGGGACTGAATTTGAACCCAAGAAAAATAATTTAA-CCCAAAA-------------ATAGTTTAATATTAGCATTAAGTTTCTTTCTGTTTTGAGGCCAATTTCTCAGGTAAACTGTCCAAGCTAGTAAGTTAT---------AC----------AAGGACTGTGGGATGGGGAAATGAGAACAATAATGACACATGGAGGATAGGCTA-T--TTAGAAGCAACTTTCTAT---TAAAAGTC----AAATTCTATTGCTGGTTGTTAAATATGATCAAAGTCACTCTTACAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAGTAGCCAGAG-AAGGTTTGGTGTCTCACTGGCAAACTTTACACCTCCAA---ATCCTAAATCAACCCCAGCCCCACACTCTTCCAACATACTATGTAAAACCAAGGTTGCTTATAAACAGTAAGTCTAATTTA---GGAAAAGTGAAAGCAATGAAG--AGAGAGAGCAGAAAGGAAGATAACTGGTAAAAGAAACAAAAGAGTTTACAGTTTGT-----CTTTTTGGT-AAATATAATCACT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102839293 610 + 110113093 A----ATCT----AC--------------------------AAACTGAATTTAAAGCAAAATAT--TTCCTAATGTAATCATTAC---------------------------GTTGTAAAT-GAATCAACTTGCTAT---CAAATACTACAGAAACT-----AAAAAAAC--ACTACCTGACAGGGACTGAATTTGAACCCAGGAAAAATAATTTAA-CCCAAAA-------------ATAGTTTATTATTGGCATTAAGTTTCTTTGTGCTTTGAGGCCAATTTCTCAGGTAAACTGTCCAAGCTAGTAAGTTAT---------AC----------AAGGACTGTGGGATGGGGAAATGAGAACAATAATGACAGGTGGAGGACAGGTTA-T--TTAGAAGCAACTTTCTAT---TAAAAGTC----AAATTCTATTGCTGGTTGTTTAATATGATCAAAGTCACTCTCACAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAGCAGCCAGAG-AAGGTTTGGTGTCTCACTGGCAAACTTTACACCTCCAA---ATCCTAAATCAACCCCAGCCCCACACTCTTCCAACATACTATGTAAAACCAAGGTTGCTTATAAACAGTAAGTCTAATTTA---GGAAAAGTGAAAGCAATGAAG--AGAGAGAGCAGAAAGGAAGATAACTGGTAAAAGAAACAAAAGAGTTTACAGTTTGT-----CGTTTTGGT-AAATATAATCACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178455947 611 + 185818997 A----ATCT----AT--------------------------CAACTGAACTAAAAGCAAAAGAG--TTCCTAATGTAATCATTAA---------------------------GTTGTAAATAGAACCAACTTGCTAT---CAAATACTACAGAAACT-----AAAAAAAT--ACTACCTGGCAGGGACTGAATTTGAACCCAAGAAAAATAATTTAA-CCCCAAA-------------ATCGTTTAATATTAGCATTAAATTTCTTTCTGCTTTGAGGCCAATTTCCCAGGTAAACTGTCCAAGCTAGTAGGTTAT---------AC----------AGGGACTGTGGGATGGGGAAATAAGAACAATAATGACAGGTGGAGGACAGGCTA-T--TTAGAAGCAACTTTCTAT---TAAAAGTC----ATATTCTATTGCTGGTTGTTAAATATGATCAAAGTCACTCTTACAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAGCAGCCAGAG-AAGGTCTGGTGTCTCACTGGCAAACTTTACACCTCCAA---ATCCTAAATCAATCCCGGCCCCACACTCTTCCAACATACTATGCAAAACCAAGGTTGCATATAAACAGTGAGTCTACTTTA---GGAAAAGTGAAAGCAATGAAG--AGAGAGAGCAGAAAGGAAGATAACTAGTAAAAGAAACAAACAAGTTTACAGTTTGT-----CTTTTTGGT-AAATATAATCACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184945673 611 + 192294377 A----ATCT----AT--------------------------CAACTGAACTAAAAGCAAAAGAG--TTCCTAATGTAATCATTAA---------------------------GTTGTAAATAGAACCAACTTGCTAT---CAAATACTACAGAAACT-----AAAAAAAT--ACTACCTGGCAGGGACTGAATTTGAACCCAAGAAAAATAATTTAA-CCCCAAA-------------ATCGTTTAATATTAGCATTAAATTTCTTTCTGCTTTGAGGCCAATTTCCCAGGTAAACTGTCCAAGCTAGTAGGTTAT---------AC----------AGGGACTGTGGGATGGGGAAATAAGAACAATAATGACAGGTGGAGGACAGGCTA-T--TTAGAAGCAACTTTCTAT---TAAAAGTC----ATATTCTATTGCTGGTTGTTAAATATGATCAAAGTCACTCTTACAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAGCAGCCAGAG-AAGGTCTGGTGTCTCACTGGCAAACTTTACACCTCCAA---ATCCTAAATCAATCCCGGCCCCACACTCTTCCAACATACTATGCAAAACCAAGGTTGCATATAAACAGTGAGTCTACTTTA---GGAAAAGTGAAAGCAATGAAG--AGATAGAGCAGAAAGGAAGATAACTAGTAAAAGAAACAAACAAGTTTACAGTTTGT-----CTTTTTGGT-AAATATAATCACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7914289 607 + 15219753 A----ATCT----AT--------------------------CAACTGAACTAAAAGCAAAAGAG--TTCCTAATGTAATCATTAA---------------------------GTTGTAAATAGAACCAACTTGCTAT---CAAATACTACAGAAACT-----AAAAAAAT--ACTACCTGGCAGGGACTGAATTTGAACCCAAGAAAAATAATTTAA-CCCCAAA-------------ATCGTTTAATATTAGCATTAAATTTCTTTCTGCTTTGAGGCCAATTTCCCAGGTAAACTGTCCAAGCTAGTAGGTTAT---------AC----------AGGGACTGTGGGATGGGGAAATAAGAACAATAATGACAGGTGGAGGACAGGCTA-T--TTAGAAGCAACTTTCTAT---TAAAAGTC----ATATTCTATTGCTGGTTGTTAAATATGATCAAAGTCACTCTTACAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAGCAGCCAGAG-AAGGTCTGGTGTCTCACTGGCAAACTTTACACCTCCAA---ATCCTAAATCAATCCCGGCCCCACACTCTTCCAACATACTATGCAAAACCAAGGTTGCATATAAACAGTGAGTCTACTTTA---GGAAAAGTGAAAGCAATGAAG--AGATAGAGCAGAAAGGAAGATAACTAGTAAAAG----AAACAAGTTTAGAGTTTGT-----CTTTTTGGT-AAATATAATCACT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9558447 611 + 11639508 A----ATCT----AT--------------------------CAACTCAACTAAAAGCAAAAGAG--TTCCTAATGTAATCATTAA---------------------------GTTGTAAATAGAACCAACTTGCTAT---CAAATACTACAGAAACT-----AAAAAAAT--ACTACCTGGCAGGGACTGAATTTGAACCCAAGAAAAATAATTTAA-CCCCAAA-------------ATCGTTTAATATTAGCATTAAATTTCTTTCTGCTTTGAGGCCAATTTCTCAGGTAAACTGTCCAAGCTAGTAGGTTAT---------AC----------AGGGACTGTGGGATGGGGAAATAAGAACAATAATGACAGGTGGAGGACAGGCTA-T--TTAGAAGCAACTTTCTAT---TAAAAGTC----ATATTCTATTGCTGGTTGTTAAATATGATCAAAGTCACTCTTACAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAGCAGCCAGAG-AAGGTCTGGTGTCTCACTGGCAAACTTTACACCTCCAA---ATCCTAAATCAATCCCGGCCCCACACTCTTCCAACATACTATGCAAAACCAAGGTTGCATATAAACAGTGAGTCTACTTTA---GGAAAAGTGAAAGCAATGAAG--AGATAGAGCAGAAAGGAAGATAACTAGTAAAAGAAACAAACAAGTTTACAGTTTGT-----CTTTTTGGT-AAATATAATCACT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120410005 611 + 127223203 A----ATTT----GT--------------------------CAACTGAACTAAAAGCAAAAGAG--TTCCTAATGTAATCATTAA---------------------------GTTGTAAATAGAACCAACTTGCTAT---CAAATACTACAGAAACT-----AAAAAAAT--ACTACCTGGCAGGGACAGAATTTGAACCCAAGAAAAATAATTTAA-CCCCAAA-------------ATCATTTAATATTAGCATTAAATTTCTTTCTGCTTTGAGGCCAATTTCTCAGGTAAACTGTCCAAGCTAGTAGGTTAT---------AC----------AGGGACTGTGGGATGGGGAAATAAGAACAATAATGACAGGTGGAGGACAGGCTA-T--TTAGAAGCAACTTTCTAT---TAAAAGTC----ATATTCTACTGCTGGTTGTTAAATATGATCAAAGTCACTCTTACAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAGCAGCCAGAG-AAAGTTTGGTGTCTCACTGGCAAACTTTACACCTCCAA---ATCCTAAATCAATCCCGGCCCCACACTCTTCCAACATACTATGCAAAACCAAGGTTGCATATAAACAGTGAGTCTACTGTA---GGGAAAGTGAAAGCAATGAAG--AGACAGAGCAGAAAGGAAGATAACTAGGAAAAGAAACAAACGAGTTTACAGTTTGT-----CTTTTTGGT-AAATATAATCACT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1536332 611 - 2854183 A----ATCT----AT--------------------------CAACTGAACTAAAAGCAAAAGAG--TTCCTAATGTAATCATTAA---------------------------GTTGTAAATAGAACCAACTTGCTAT---CAAATACTACAGAAACT-----AAAAAAAT--ACTACCTGGCAGGGACTGAATTTGAACCCAAGAAAAATAATTTAA-CCCCAAA-------------ATCGTTTAATATTAGCATTAAATTTCTTTCTGCTTTGACGCCAATTTCTCAGGTAAACTGTCCAAGCTAGTAGGTTAT---------AC----------AGGGACTGTGGGATGGGGAAATAAGAACAATAATGACAGGTGGAGGACAGGCTA-T--TTAGAAGCAACTTTCTAT---TAAAAGTC----ATATTCTATTGCTGGTTGTTAAATATGATCAAAGTCACTCTTACAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAGCAGCCAGAG-AAGGTCTGGTGTCTCACTGGCAAACTTTACACCTCCAA---ATCCTAAATCAATCCCGGCCCCACACTCTTCCAACATACTATGCAAAACCAAGGTTGCATATAAACAGTGAGTCTACTTTA---GGAAAAGTGAAAGCAATGAAG--AGATAGAGCAGAAAGGAAGATAACTAGTAAAAGAAACAAACAAGTTTACAGTTTGT-----CTTTTTGGT-AAATATAATCACT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20242865 608 + 27496150 A----ATCT----AT--------------------------CAACTGAACTAAAAGCAAAAGAG--TTCCTAATGTAATCATTAA---------------------------GTTGTAAATAGAACCAACTTGCTAT---CAGATACTACAGAAACT-----AAAAAAAA--ACTACCTGGCAGGGACTGGATTTGAACCCAAGAAAAATAATTTAA-CCCCAAA-------------ATCGTTTAATATTAGCATTAAATTTCTTTCTGCTTTGAGGCCAATTTCTCAGGTAAACTGTCCAAGCTAGTAAGTTAT---------AC----------AGGGACTGTGGGATGGGGAAATAAGAACAATAATGACAGGTGGAGGACAGGCTA-T--TTAGAAGCAACTTTCTAT---TAAAAGTC------ATTCTATTGCTGGTTGTTAAATATGATCAAAGTCACTCTTACAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAACAGCCAGAG-AAGGTTTGGTGTCTCACTGGCAAACTTTACACCTCCCA---ATCCTAAATCAATCCCGGACCCACACTCTTCCAACATACTATGCAAAACCAAGGTTGCATATAAACAGTGAGTCTAATTTA---GGAAAAGTGAAAGCAATGAAG--AGACAGAGCAGAAAGGAAGATAACTAGT-AAAGAAACAAACGAGTTTGCAGTTTGT-----CTTTTTGGT-AAATATAATCACT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33695952 627 - 128169293 A----ATCT----AT--------------------------AAACTAAATTTAAAGCAAAAGAG--TTCCTAATGTAACCATTAG-----TAAC---------TTGTAAAGAGAGGTAAATAGAACCAATTTGCTAT---CAAATACTACAGAAACT-----AAAAAGATATACTATCTAGCTGGGACTGAATTTGAACCTAAGAAAAATAATTTAA-CCAAAAA-------------ATTGTTTAACATTGGCATTAAGTTTCTTTCTGCTTTGAGGCCAATTTCTCAGATAAACTGTCCAACCTACTAGGTTAT---------AT----------TAGGACTGGAGGATGGGGAAATGAGAACAATAATGACAGGTGGAGGATAGGCTACC--CTAGAAGCAACTTTCTAT---TAAAAGTC----AAATTCTATTGCTGGCTGTTAAATATGATCAAAGTCACTCTTAAAGCCCAAGAGTACT---ATC---------AGTTTTAAAAAACAGCCAGAGAAATGTTTGGTGAATCACTGGCAAACTTTACACCTCCAA---ATCCTAAATCAACCCCAGGCCCACACTCTTCCATCATACCATGCAAAACCAAGGTTGCTTGTAAACAGTAAATCTAATTTA---GGAAAAGTGAAAGCAATGAAG--AGAGAGAGCAGAAAGGAAAATAACTAGTAAAAGAAAT--AAGAGTTTATAGTTTGT-----CTTTTTGTT-AAATATAATCACT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17032358 628 + 19594188 A----ATCT----AC--------------------------AAACTGAATTAAAAGCAAAAAAG--TTCCTAATGTAACCATTAG-----TAAC---------TTGTAAAGAGAGGTAAATAGAAGCAACTTGCTAT---CAAATACTACAGAAACT-----ATAAAGATACACTATCTGGCTGGGACTGAATTTGAACCTAAGAAAAATAATTTAA-CCAAAAA-------------ATTGTTTAACATTGGCATTAAGTTTCTTTCTGCTTTGAGGCCAATTTCTCAGATAAATTGTCCAATCTAGTAAGTTAT---------AC----------TAGGACTGCAGGATGGGGAAATGAGAACAATAATGACAGGTGAAGGATAGGCCA-C--TTAGAAGCAACTTTCTAC---TAAAAGTC----AAATTCTATTGCTGGTTTTTAAAAATGATCAAAGTCACTCTTAAAGCCCAAGAGTACT---ATC---------AGTTTT-AAAAACAGCCAGAGAAAGGTTTGGTGTCTCACTGGCAAACTTTATACCTCCAA---ATCATAAATCAACCCCAGGCCCACACTCTTCCAACATACTATGCAAAACCAAGATTGCTTGTAAACAGTAAATCTAATTTA---GGAAGAGTGAAAGCAATGAAG--AAAGAGAGCAGAAAGGAAAATAACTAGTAAAAGAAATGAAAGAGTTTATAGTATGT-----CTTTCTGTTAAAATATAGTCACT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4919779 620 - 11686629 A----ATCT----AC--------------------------AAACTGAATTAAAAGCAAAAGAG--TTCCTAATATAACCATTAG-----TAAC---------TTGTAAAGAGAGGTAAATAGAACCAACTTGCTAT---CAAATACTACAGAAACC-----AAAAAGATATACTATCTTACTGGGACTGAATTTGAACCTAAGAAAAATAATTTAA-CCAAAAA-------------ATTGTTTAACATCGGCATTAGGTTTCTTTCTGCTTTGAGGCCAATTTCTCACATAAATTGTCCAACCTAGTACGTTAT---------AC----------TAGGACTGCAGGATGGGGAAATGAGAACAATAATGACAGGTGGAGGATAGGCTA-C--TTAGAAGCAACTTTCTTT---TAAAAGTC----AAATTCTATTGCTGGTTGTTAAATATGATCACAGTTACTCTTAAAGCCCAAGAGTACT---ATC---------AGTTTT-TAAAACAGCCAGAGAAAGGTTTGATGTCTCACTGGCAAACTTTACACCTCCAA---ATCCTAAATCAACCCCAGGCCCACACTCTTCCAACATACTATGCAAAACCAAGGTTGCCTGTAAACAGTAAATCTAATTTA---GGAAAAGTGAAAGCAATGAAGAAAAAAAGAGCAGAAAGGAAAATAACTAGTAA---------AAGAGTTTATAGTTTGT-----CTTTCTGTT-AAATATAATCACT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3268827 627 - 4527795 A----ATCT----AC--------------------------AAACTGAATTAAAAGCAAAAGTG--TTCCTAATATAACCATTAG-----TAAC---------TTGTAAAGAGAGGTAAATAGAACCAACTTGCTAT---CAAATAATACAGAAACT-----AAAAAGATATACTATCTGGCTGGGACTGAATTTGAACCTAAGAAAAATAATTTAA-CAAAAAA-------------ATTGTTTAACATTGACATTAAGTTTCTTTCTGCTTTGAGGCCAATTTCTCAGATAAATTGTCCAACCTAGTAAATTAT---------AC----------TAGGACTGTAGGATGGGGAAATGAGAACAATAATGACAGGTAGAGGATAGGCTA-C--TTAGAAGCAACTTTCTAT---TAAAAGTC----AAATTCTACTGCTGGTTATTAAATATGATCAAAGTCACTCTTAAAGCCCAAGAGTACT---ATC---------ACTTTT-AAAAACAGCCAGAGAAAGGTTTGGTGTCTCACTGGCAAACTTTGCACCTCCGA---ATCCTAAATCAACCCCAGGCCCACACTCTTCCAACATATTATGCAAAACCAAGGTTGCTTGTAAACAGTAAATCTAATTTA---GGAAAAGTGAAAGCAATGAAG--AGAGAGAGCAGAAAGGAAAATAACCACTAAAATAAATCAAAGAGATTATAGTTTGT-----CTTTCTGTT-AAATATAATCACT i aotNan1.NW_018506100v1 C 0 I 363 s otoGar3.GL873572 5485007 614 - 12253515 AAACTAGCT----AC--------------------------AAACTAAATTAAGAGCAACAGAG--TTCAAAATGTAACCATCAG-----TAAA---------TTATAAAGGGAGCTAAACAGAACCAACTTGCTAT---CAAATCCCATATAACAT-----AAAAGAAC--ACTACCTGGCAGAGACTGAATTAGAATCCCAAAA----TACTTAT-CCCAAAATTATTGGGGTTGGATAATTTAAAGTTGGTATAAAACTTCTTTCT------------------CATGTAAACTTATCAACTCTGTA-GTTAT---------ACAGGTGTTACAAAGGCCTGTGGG-TAGGGAGGTGGGAACAATAACGGCAGGTGCAAAACAGACTA-C--T--GGAGCAACATTCTAC---GAAAAGTCAAATAAATCTTACTCCTGACTGTTAAATATGACCA----CCCGATCACAGCCCGAGAGTGAT---TCC---------AATTTT-AAAAGCCGTCAGAG-AACGGGTGGTATCTTAAGTGTAAACCTCACACCTAGAG---GGGCTAAGTAAACCCTGGACCCACACTCTTCCAACATATTATGCAAAACCCAGGTTGCTATTAAACAATAAGTCTTATTCA--GGGAAAATTAAAAACACTGAAG--AGATAGTACAGAAAGGAAGATAACTAGTACAAGAAATAAAATA--TAAAAAGATG----------------TATCATAAACTCT i otoGar3.GL873572 C 0 I 2 s canFam3.chr16 16055143 645 + 59632846 A----AACTACGCAC--------------------------AAAACAAATTAAAAGCAAAAGGG--TTCAAAATGTAGCCATCAGGAGACTAAG---------ATGTAAAGAGAGCTACAGAGAAGAAACTTGCTAT---CAAATCCTATAGTAACTT---AAAAAAAATATACCACTTGGTTGAGATTGAATTAGATTCTAACAAGAATTACTGAA-CCCAAAA-------------CCTGTTTAAAGTTGGTATTAAGTTTCTTTCT----CAAGGCCAATTTCTCAGGTAAATTTACCAGCCTAGTAAATCAT---------ACTACTGTTAA-AACGGCTGTGGGAAAGGAAAATGAAAACAATAATGGCAAGTGGAGAAAAGGGTA----TTATGGTCAACTTTCTATTACTAGAAGCC----TAGTCCTGTTGCTTGCTGTTAAGTATGATCAATGTCATAATTAGAACCCAAGAGTACCCTAATCTACTGGAAAAGTTTC-AAGAGCAGCCAGAG----GTTTGG----TCCTGGGCAGACTTGGCACCTCCAAGTCATCCTCACTCAGTTCCAGC------CTCTCCCAACATGCTATGCGAAACCAAGGTTGCTATGAAACAATGAGTCTGATTTA---GAGAGACCGAAAATGATG--G--AGAGAGAGCAGAAAGG---ATGACCAGCGAGAG-AACAAAAAACTTAAGCATTTATAATTCCTTTTTGGT-ATATACATTCACC i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1227055 643 + 1922530 a----agct----gcaagggggggagggataaataaaaataaaaataaattaaaaaaaAAAAAGGATTCAAAATATAGCCACCAG-----GAGCCCGTAAATTTTGTAAAGAAAGCTAAATATAACAAACTTGCTATCACCAAATCTTACAGAAACTTAAAAAAAAAAAA--GCTAGGTAGCAGAGGCGGAATAAGATTCTAAGAAAAATTATTTAACCCCCAAA-------------ATTGTTTAAAGTTGGTATTATGATCCTTTCTGCTTTGAGGCTAATGTCTCAGGTAGATTTGTCAACCTAGTAAATTATAGAGCTGTAAC----------AAGGACTGTGGGGTAGGGGAATGTTAACAGTAATGGCAGATGAAGGACAGGCTA-TTATGGGCAAAAACTTTCTCT---TAGAAGTC----AAATCCTTTTGCTGGCTGTTAAACATGACCAAAGTAAC----------------TACT---AAG---------AGTCCT-CATA-----------AAGGTTTGGTATCTCATGGGCAAATTTCCTTCCTCTAAG--ACTCTAAGTTA---------------------AACATAGTATAGAAAACCAAAATTGCTATTAGACCTTGACTCTAATTTATTAGAGAAAGAGAAAACACGGAAG--AGATAGAGAAGAAAGGAGGACAACTAGTAAGGGAAATGGAAAACATAGGAGTTTATATTTGTTTTTTGGG-TACTACATTCATT i dasNov3.JH575209 I 131 I 6 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=64538.000000 s hg38.chrUn_KI270746v1 55543 9 + 66486 TGTATACAC s panTro5.chr7 156353106 9 + 166211670 TGTATACAC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155966189 9 + 162613886 TGTATACAC i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102839903 9 + 110113093 TGTATACAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178456558 9 + 185818997 TGTGTACAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184946284 9 + 192294377 TGTGTACAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7914896 9 + 15219753 TGTGTACAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559058 9 + 11639508 TGTGTACAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120410616 9 + 127223203 TGTGTACAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1536943 9 - 2854183 TGTGTACAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20243473 9 + 27496150 TGTGTACAT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33696579 9 - 128169293 CATATACAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17032986 9 + 19594188 CATGTACAT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4920399 9 - 11686629 CATGTACAT i cebCap1.NW_016107335v1 C 0 C 0 s otoGar3.GL873572 5485623 9 - 12253515 TAAGTACAC i otoGar3.GL873572 I 2 C 0 s canFam3.chr16 16055788 1 + 59632846 ----T---- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1227704 9 + 1922530 TGTGTACAT i dasNov3.JH575209 I 6 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e aotNan1.NW_018506100v1 3269454 363 - 4527795 I a score=2886111.000000 s hg38.chrUn_KI270746v1 55552 308 + 66486 TGGAGCTACAGCAGCAAA---CACTTCACT------CTTTAGG----G-------------AATTCTTA------AAAGAAG--TCT--CATATATAAAATTGAGTTCAATATCAAGTAGAACAAGAAATTAGACCCAATCCTGTTTTGAT------------AACTACAGAAACAGCTA-TTA---CCAGCTT-TAGCCTTCAATAATTTCACAATACAAAT-TAGG--TAGTGCTAGCAACAGT------AATGTCTCCAAAAATACCACAACAAGCACAAGTGAACTAAAAGC-AAATTCTGGTACTTCTAATCTGC-TGTGTTGTTAGCTTGGTGTTCCAAAGGG-GTAGATATTTTTTAGGTTTAACA s panTro5.chr7 156353115 308 + 166211670 TGGAGCTACAGCAGCAAA---CACTTCACT------ATTTAGG----G-------------AATTCTTA------AAAGAAG--TCT--CATTTATAAAATTGAGTTCGATATCAAGTAGAACAAGAAATTAGACCTAATCCTGTTTTGAT------------AACTACAGAAACAGCTA-TTA---TCAGCTT-TAGCCTTCAATAATTTCGCAATACAAAT-TAGG--TGGCGCTAGCAACAGT------AATATCTCCAAAAATACCACATCAAGCACAAGTGAACTAAAAGG-AAAGTCTGGTACTTCTAATCGGC-TGTGTTGTTAGCTTGGTGTTCCAAAGGG-GTAGGTATTTTTTAGGTTTAACA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155966198 310 + 162613886 TGGAGCTACAGCAGCAAA---CACTTCACT------ATTTAGG----G-------------AATTCTTA------AAAGAAGTCTCT--CATATATAAAATTGAGTTCGATATCAAGTAGAACAAGAAATTAGACCTAATCCTGTTTTGAT------------AACTACAGAAACAGCTA-TTA---TCAGCTT-TAGCCTTCAATAATTTCGCAATACAAAT-TAGG--TGGCGCTAGCAACAGT------AATATCTCCAAAAATACCACAACAAGCACAAGTGAACTAAAAGG-AAAGTCTGGTACTTCTAATCGGC-TGTGTTGTTAGCTTGGTGTTCCAAAGGG-GTAGGTATTTTTTAGGTTTAACA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102839912 305 + 110113093 TGGAGCTACGGCAGCAAA---CACTTCACT------ATTTAGG----G-------------AATTCTTA------AAAGAAG--TCT--CATATATAAAATTGAGTTCAATATCAAGTAGAACAAGAAATTAGACCTAATCCTGTTTTGAT------------AACTACAGAAACAGCTA-TTA---TCAGCTT-TAGCCTTCAATAATTTCACAATACAAAT-TAGG--TGGCGCTAGCAACAGT------AATGTCTCCAAAAATACCA---CAAGCACAAGTGAACTAAAAGG-AAAGTCTGGTACTTCTAATCTGC-TGTGTTGTTAGCTTGGTGTTCCAAAGGG-GTAGGTATTTTTTAGGTTTAACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178456567 302 + 185818997 TGGAGCTACAGCAGCAAA---CACTTCACT------ATTAAAG----G-------------AATTCTTA------AAAGAAG--TCT--CATATATAAAATTGAGTTCAATATCAAGTAGAAAAAGAAATTAGACCTAATCCTGTTTTGAT------------AACAAAAGAAACAGTT--TTA---TCCGCTT-TAGCCTTCGATAATTTCAGAATACAAAT-TAGG--TGGCGCTAGCAACAGT------AATGTCTCCAAAAATACCACAA-----ACAAGTAAACTAAAAGG-AAAGTCTGGTACTTCTAACCTGC-TGTATCGTTAGCCTGATGTTCCAAAGGG-GTAGATATGTTTTAGGTTTAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184946293 307 + 192294377 TGGAGCTACAGCAGCAAA---CACTTCACT------ATTAAAG----G-------------AATTCTTA------AAAGAAG--TCT--CATATATAAAATTGAGTTCAATATCAAGTAGAAAAAGAAATTAGACCTAATCCTGTTTTGAT------------AACAAAAGAAACAGTT--TTA---TCCGCTT-TAGCCTTCGATAATTTCAGAATACAAAT-TAGG--TGGCGCTACCAACAGT------AATGTCTCCAAAAATACCACAACAAGCACAAGTAAACTAAAAGG-AAAGTCTGGTACTTCTAACCTGC-TGTATCGTTAGCTTGATGTTCCAAAGGG-GTAGATATGTTTTAGGTTTAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7914905 307 + 15219753 TGGAGCTACAGCAGCAAA---CACTTCACT------ATTAAAG----G-------------AATTCTTA------AAAGAAG--TCT--CATATATAAAATTGAGTTCAATATCAAGTAGAAAAAGAAATTAGACCTAATCCTGTTTTGAT------------AACAAAAGAAACAGTT--TTA---TCCGCTT-TAGCCTTCGATAATTTCAGAATACAAAT-TAGG--TGGCGCTAGCAACAGT------AATGTCTCCAAAAATACCACAACAAGCACAAGTAAACTAAAAGG-AAAGTCTGGTACTTCTAACCTGC-TGTATCGTTAGCTTGATGTTCCAAAGGG-GTAGGTATGTTTTAGGTTTAAAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559067 307 + 11639508 TGGAGCTACAGCAGCAAA---CACTTCACT------ATTAAGG----G-------------AATTCTTA------AAAGAAG--TCT--CATATATAAAATTGAGTTCAATATCAAGTAGAAAAAGAAATTAGACCTAATCCTGTTTTGAT------------AACAAAAGAAACAGTT--TTA---TCCGCTT-TAGCCTTCAATAATTTCAGAATACAAAT-TAGG--TGGCGCTAGCAACAGT------AATGTCTCCAAAAATACCACAACAAGCACAAGTAAACTAAAAGG-AAAGTCTGGTACTTCTAACCTGC-TGTATCGTTAGCTTGATGTTCCAAAGGG-GTAGGTATGTTTTAGGTTTAAAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120410625 302 + 127223203 TGGAGCTACAGCAGCAAA---CACTTCACT------ATTTAGG----G-------------AATTCTTA------AAAGAAG--TCT--CATATATAAAATTGAGTTCAATATCAAGTAGAAAAAGAAATTAGACCTAATCCTGTTTTGAT-----------------AAGAAACAGTT--TTA---TCCACTT-TAGCCTTCGATAATTTCAGAATACAAAT-TAGG--TGGCGCTAGCAACAGT------AATGTCTCCAAAAATACCACAACAAGCACAAGTAAACTAAAAGG-AAAGTCTGGTACTTCTAACCTGC-TGTATTGTTAGCTTGGTGTTCCAAAGGG-GTAGGTATTTTTTAGGTTTAAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1536952 307 - 2854183 TGGAGCTACAGCAGCAAA---CACTTCACT------ATTAAGG----G-------------AATTCTTA------AAAGAAG--TCT--CATATATAAAATTGAGTTCAATATCAAGTAGAAAAAGAAATTAGACCTAATCCTGTTTTGAT------------AACAAAAGAAACAGTT--TTA---TCCGCTT-TAGCCTTCGATAATTTCAGAATACAAAT-TAGG--TGGCGCTAGCAACAGT------AATGTCTCCAAAAATACCACAACAAGCACAAGTAAACTAAAAGG-AAAGTCTGGTACTTCTAACCTGC-TGTATCGTTAGCTTGATGTTCCAAAGGG-GTAGGTATGTTTTAGGTTTAAAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20243482 307 + 27496150 TGGAGCTACAGCAGCAAA---CACTTCACT------ATTTAGG----G-------------AATTGTTA------AAAGAAG--TCT--CATACATAAAATTGAGTTCAATATCAAGTAGAAAAAGAAATTAGACCTAATCCTGTTTTGAC------------AACAAAAGAAACAGTT--TTA---TCCGCTT-TAGCCTTCGATAATTTCAGAATACAAAT-TAGG--TGGCGCTAGCAACAGT------AATGTCTCCAAAAATACCACAATAAGCACAAGTAAACTAAAAGG-AAAGTCTGGTACTTCTAACCTGC-TGTATCGTTAGCTTGGTGTTCCAAAGGG-ATAGGTATTTTTTAGGTTTAAAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33696588 309 - 128169293 TGGAGCTACAGCAGCAAA---CACTTCATT------ATTTAGG----G-------------AATTCTTA---CATAAAGAAG--ACT--CATATATAAAATTGAGTTCAGTATCATGTAGAACAAAAAATCAGACCTAATCCTGTTTTGAT------------AATTACAGAAACAGCTGTTAA---TCAGCTT-TAGCCTTAAATAATTTCCGAATACAATG-TAGG--TGGCACTAGCAACATT------AATGGCTCCACAAATGCCACAACAAGCACAAGGAAACTAAAAGGAAAAGTCTGGTACTTCTAATCTGC-----CCATGTCTTTGGTGTTCCAAAGGG-CTAGGTATTTTTTAGGTTTAAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17032995 304 + 19594188 TGGAGCTACAGCAGCAAA---CACTTCACT------ATTTAGG----G-------------AATTCTTA---CATAAAGATG--ACT--C----ATAAAATTGAGTTCAGTATCATGTAGAACAAAAAATTAGACCTAATCCTGTTTTGAT------------AATTACAGAAACAGCTGTTAA---TCAGCTT-TAGCCTTAAATAATTTCAGAATACAATG-TAGG--AGGCAGTAGCAACATT------AATGGCTCCACAAATGCCACAACAGGCACAAGGGAACTTAAAGG-AAAGTCTGGTACTTCTAATCTGC-----CCATGTCTTTGGTGTTCCAAAGGG-CTAGGTATATTTTAGGTTTAAAA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4920408 319 - 11686629 TGGAGCTACAGCAGCAAA---CACTTCACT------ATTTAGG----GAATTCTTACATAAAATTCTTA---CATAAAGAAG--ACT--C--ACATAAAATTGAGTTCATTATCATGTAGAACAAAAAATTAGACCTAATCCTGTTTTGAT------------AATCACAGAAACAGCTGTTAG---TCAGCTT-TAGCCTTAAATAATTTCAGAATACAATG-TAGG--TGGCACTAACAACATT------AATGGCTCCACAAATGCCACAAAAGGCATAAGGAAACTAAAAGG-AAAGTCAGGTACTTCTAATCTGC-----CCATTTCTTTGGTGTTCCAAAGGG-CTAGGTATTTTTTAGGTTTAAAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3269817 306 - 4527795 TGGAGCTACAGCAGCAAA---CACTTCATT------ATTTAGG----A-------------AATTCTTA---CATAAAGAAG--ACT--C--GCATAAAATTGAGTTTACTATCATGTAGAACAAAAAATTAGACCTAATCCTGTTTTGAT------------AATTACAGAAACAGTTGTTAA---TCAGCTT-TAGCCTTAAATAATTTCAGAATACAATG-TAGG--TGGCACTAGCAACATT------AATGCCTCCACAAATGCCACAACAAGCACAAGGAAACTAAAAGG-AAAGTCTGGTACTTCTAATCTGC-----CCATGTCTTTAGTGTTCCAAAGGG-CTAGGTATTTTTTAGGTTTAAAA i aotNan1.NW_018506100v1 I 363 C 0 s otoGar3.GL873572 5485632 315 - 12253515 TAGGGCTATAGCAGCATACTTCACATTATT------ACTTATG----G-------------GACTCTTTTTACATAAAGTAG--TCTAGTATACAAAAAACTGAGGTCAACATCAAGTAGAATGAGAAATCAAAACTG----TGATTTGCT------------AAGTACAGAAACAACTG-TTA---TCAACTT-CAGCCTCTGATCATTTCAGAATAAAAATGTGGC--TGATGTTAGGAATGGT------AATGGCTTCAGAACTACCACCATGAGCACAAGCAAACTAAAAGG--AGGTCTAGTGTTTCTCATCTGT--GTGTCTTTAGCTTGACATTCCAAAATGCCCAGATAGTTTTTAGGTTTAAAA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16055789 315 + 59632846 TACAGCCACAGCAGCAAA---CGACTCATTTTTATGACTTACA----G-------------AATTCTTTTCACATAAATAAG--TCT--CATATACAAAACTGAGTTCAACATCAAATGGAAGA--AATTTAGTCCTGATAGTGCTTTGATAAGATGCTATAAAAGTACAAAAACAGCTG-TTA---CCAGCTTAAAGCCTTCAATAATTTAGGAATGTGAAT-TTGG-CCAGTGCTAG-AATTTG------GCCGGCTTTGGAAATATCACCACAGGCACAAGAAAACCAAGAGA-AAGG----------------GGA-TGTGTTTGTGGCTTGCCACCCCAGAGGG-CTAGACATTTTTTAGGTTTAAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1227713 324 + 1922530 TAGAGTTAAGGTAACAAA---CAA--CATT-------TTTAGGCTTAA-------------AATTATTT-TACATAAGCAAG--TTT--CATATATAAAACTAAATTGAACATCAAATAGAACAAGAAATTAGTCCTGATTATGATTTGAT------------ATTGAAAGTATAGAATGTTTAGCTTTAATTT-AAGCCTTCAAT-ATTTCA-AATGCACAC-TGGGGCTGGTGCTAGCAATGGTTTTAGAAATGACTTCTGAAATATTACTACAGACAGAAGGAAACCAGGAAG-AAAAGCTGGTGTTTCTATTATTTATGTGTTTTTAGCTTGATATATCAAAGGG-CTAGACAT-TTTAAGGTTTAAAA i dasNov3.JH575209 C 0 I 520 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=100680.000000 s hg38.chrUn_KI270746v1 55860 9 + 66486 CTATGGTTC s panTro5.chr7 156353423 9 + 166211670 CTATGGTTC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155966508 9 + 162613886 CTATGGTTC i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840217 9 + 110113093 CTATGGCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178456869 9 + 185818997 CTATGGTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184946600 9 + 192294377 CTATGCTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915212 9 + 15219753 CTATGGTTC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559374 9 + 11639508 CTATGGTTC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120410927 9 + 127223203 CTATGGTTC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537259 9 - 2854183 CTATGGTTC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20243789 9 + 27496150 CTATGGTTC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33696897 9 - 128169293 CTATGGTTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17033299 9 + 19594188 CTATGGTTC i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4920727 9 - 11686629 CTATGGTCC i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3270123 9 - 4527795 CTATGGTTC i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5485947 9 - 12253515 CCATGGTTC i otoGar3.GL873572 C 0 I 1733 s canFam3.chr16 16056104 9 + 59632846 CTACAGTTT i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1228037 520 + 1922530 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=114720.000000 s hg38.chrUn_KI270746v1 55869 11 + 66486 TCTGGCTACTT s panTro5.chr7 156353432 11 + 166211670 TCTGGCTACTT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155966517 11 + 162613886 TCTGGCTACTT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840226 11 + 110113093 TCTGGCTACTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178456878 11 + 185818997 TCTGGCTACTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184946609 11 + 192294377 TCTGGCTACTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915221 11 + 15219753 TCTGGCTACTT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559383 11 + 11639508 TCTGGCTACTT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120410936 11 + 127223203 TCTGGCTACTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537268 11 - 2854183 TCTGGCTACTT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20243798 11 + 27496150 TCTGGCTACTT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33696906 11 - 128169293 TCTGGCTACTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17033308 11 + 19594188 TCTGGCTACTT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4920736 11 - 11686629 TCTGGCTACTT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3270132 11 - 4527795 TCTGGCTACTT i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16056113 11 + 59632846 TTCAGTGACTT i canFam3.chr16 C 0 I 1619 e dasNov3.JH575209 1228037 520 + 1922530 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e otoGar3.GL873572 5485956 1733 - 12253515 I a score=2031326.000000 s hg38.chrUn_KI270746v1 55880 251 + 66486 TTAAAACTGAAAGTACTCTTCTTATAATATAAAGTAAACTTCTAATAATTTGTCCAAGAGATATCAAAATACAGTACCTATGTTTTCATTTATGAAATTTTCTTGAAATATTTACTGCAGTctgggcgtggtggctcacccctgtaaccccagcacttagggaggacaaggcgggtggatcacctgaggtcaggatttcaagaccagcctaaccaatatggcgaaacaccatctctactaaaaata--taaaa s panTro5.chr7 156353443 251 + 166211670 TTAAAACTGAAAGTACTCTTCTTATAATATAAAGTAAACTTCTTATAATTTGTCCAAGAGATATCAAAATACAGTACCTATGTTTTCATTTATGAAATTTTCTTGAAATATTTACTGTAggctgggcatggtggctcacccctgtaatcccagcactttgggaggacaaggcgggtggatcacctgaggtcaggaattcgagaccagcctaaccaatatggcgaaacaccgtctctactaaaaata--tttta i panTro5.chr7 C 0 C 0 s panPan2.chr7 155966528 251 + 162613886 TTAAAACTGAAAGTACTCTTCTAATAATATAAAGTAAACTTCTTATAATTTGTCCAAGAGATATCAAAATACAGTACCTATGTTTTCATTTATGAAATTTTCTTGAAATATTTACTGTAggctgggcgtggtggctcacccctgtaatcccagcactttgggaggacaaggcgggtggatcacctgaggtcaggaattcgagaccagcctaaccaatatggcgaaacaccgtctctactaaaaata--tttaa i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840237 253 + 110113093 TTAAAACTGAAAGTACTCTTCTTATAATATAAAGTAAACTTCTTATAATTTGTCCAAGAGATATCAAAATACAGTACCTATGTTTTCATTTATGAAATTTTCTTGAAATATTTATTGCAggctgggcacggtggctcacccctgtaatcccagcactttgggaggacaagacgggtggatcacccaaggtcaggagttcaagaccagccttaccaatatggggaaaccctgtctctactaaaaatatttttaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178456889 251 + 185818997 TTAAAACTGAAAGTACTCTTCTTATAATATAAAGTAAATTTGTTATAATTTGTCCAAGAGATATCAAAATACATTACCTATGTTTTCATTTATGAAATTTTCTTGAAATATTTACTGCAggccaggcgtggtggctcacacctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctaaccaatatggcaaaaccccgtctctactaaaaata--tttta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184946620 251 + 192294377 TTAAAACTGAAAGTACTCTTCTTATAATATAAAGTAAACTTGTTATAATTTGTCCAAGAGATATCAAAATACATTACCTATGTTTTCATTTATGAAATTTTCTTGAAATATTTACTGCAggccaggcgtggtggctcacacctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctaaccaatatggcaaaaccccgtctctactaaaaata--tttta i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915232 251 + 15219753 TTAAAACTGAAAGTATTCTTCTTATAATATAAAGTAAACTTGTTATAATTTGTCCAAGAGATATCAAAATACATTACCTATGTTTTCATTTATGAAATTTTCTTGAAATATTTACTGCAggccaggcgtggtggctcacacctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctaaccaatatggcaaaaccccgtctctactaaaaata--tttta i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559394 251 + 11639508 TTAAAACTGAAAGTACTCTTCTTATAATATAAAGTAAACTTGTTATAATTTGTCCAAGAGATATCAAAATACATTACCTATGTTTTCATTTATGAAATTTTCTTGAAATATTTACTGCAggccaggcgtggtggctcacacctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctaaccaatatggcaaaaccccgtctctactaaaaata--tttta i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120410947 251 + 127223203 TTAAAACTGAAAGTACTCTTCTTATAATATAAAGTAAACTTGTTATAATTTGTCCAAGAGATATCAAAATACATTACCTATGTTTTCATTTATGAAATTTTCTTGAAATATTTACCGCAggccaggcgtggtggctcacacctgtaatcccagcacttcgggaggccaaggcgggtggatcacctgaggtcaggagttcaagaccagcctaaccaatatggcaaaatcctgtctctactaaaaata--caaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537279 233 - 2854183 TTAAAACTGAAAGTACTCTTCTTATAATATAAAGTAAACTTGTTATAATTTGTCCAAGAGATATCAAAATACATTACCTATGTTTTCATTTATGAAATTTTCTTGAAATATTTACTGCAggccaggcgtggtggctcacacctgtaatcccagcactttgggaggccagggtgggtggatcacctgaggtcaggagttcaagaccagcctaaccaatatggcaaaaccccgtc-------------------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20243809 251 + 27496150 TTAAAACTGAAAGTACTCTTCTTATAATATAAAGTAAGCTTGTTATAATTTGTCCAAGAGATATCAAAATACATTACCTACGTTTTCATTTATGAAATTTTCTTGAAATATTTACTGCAggccaggcgtggtggctcacacctgtaatcccagcactttgggaggccaaggcgggtggatcacctgaggtcaggagttcaagaccagcctaaccaatatggcaaaaccccgtctctactaaaaata--tttta i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33696917 245 - 128169293 TTAAAACTGAAAGTACTCTTCTTATAATATATA-----CTTTTTGTAATTTGTCCAAGAAA-ATCAAAATAGAGTACCTATGTCTTCAATTATGAAGTTTTCTTGAAATATTTACTGCAggctgtgaacagtggttcacacctgtaatcctagcactttgggaggccaaggcaggtggatcacctgaggtctggagttcgagaccagcctaaccaatatggtgaaaccccatctctattaaaaata--caaag i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17033319 244 + 19594188 TTAAAACTGAAAGTACTCTTCTTATAATATATA------TTCTTGTAATTTGTCCAAGAAA-ATAAAAATATAGTACCTATGTCTTCATTTATGAAATTTTCTTGAAATATTTACTGCAggctgggcaccatagttcacacctgtaatcccagcaccttgggaggccagggcgggtggatcacctgaggtctggagttcgagaccagcctaaccaatatggtgaaaccccatctctattaaaaata--caaag i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4920747 239 - 11686629 TTAAAACTGCAAGTACTCTTCT-----TATATA------TTCTTGTAATTTGTCCAAGAAA-ATCAAAATATCGTACCTATGTCTTCATTTATGAAATTTTCCTGAAATATTTACTGCAggctgggcactgtggttcacacctgtaatcccagcactttgggaggccaaggcgggtgtatcacctgaggtctggagttcgaaaccagcctaaccaataaggtgaaaccccatctctattaaaaata--caaag i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3270143 245 - 4527795 TTAAAACTGAAAGTATTCTTCTTATAATATATA-----CTTCTTGTAATTTGTCCAAGAAA-ATCAAAATATAGTACCTATGGCTTCATTTATGAAATTTTCTTGAACTATTTACTGCAggctgggcacagtggttcatgcctgtaatcccagcactttgggaggccaaggcgggtggatcaccagaggtctggagttcgagaccagcctaaccaatatggtgaaaccccatctctattaaaaata--caaag i aotNan1.NW_018506100v1 C 0 I 16 e dasNov3.JH575209 1228037 520 + 1922530 I e canFam3.chr16 16056124 1619 + 59632846 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e otoGar3.GL873572 5485956 1733 - 12253515 I a score=11721.000000 s hg38.chrUn_KI270746v1 56131 5 + 66486 -aaaat s panTro5.chr7 156353694 5 + 166211670 -aaaat i panTro5.chr7 C 0 C 0 s panPan2.chr7 155966779 5 + 162613886 -aaaat i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840490 5 + 110113093 -aaaat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457140 5 + 185818997 -aaaat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184946871 5 + 192294377 -aaaat i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915483 5 + 15219753 -aaaat i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559645 5 + 11639508 -aaaat i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411198 5 + 127223203 -aaaat i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115154v1 20244060 5 + 27496150 -aaaat i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33697162 5 - 128169293 cagga- i calJac3.chr8 C 0 I 11 s saiBol1.JH378140 17033563 5 + 19594188 cagga- i saiBol1.JH378140 C 0 I 11 s cebCap1.NW_016107335v1 4920986 5 - 11686629 cagga- i cebCap1.NW_016107335v1 C 0 I 11 e dasNov3.JH575209 1228037 520 + 1922530 I e canFam3.chr16 16056124 1619 + 59632846 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e otoGar3.GL873572 5485956 1733 - 12253515 I e aotNan1.NW_018506100v1 3270388 16 - 4527795 I e manLeu1.NW_012102765v1 1537512 0 - 2854183 C a score=1072296.000000 s hg38.chrUn_KI270746v1 56136 139 + 66486 tagccaggtgtgttgacgtgcgcctgtagtccctgctactcaggaagctgagacaggagaactgcttgagcaaggcaggcagaggctgcagtgag-cgaggtcgtgccac--aactccagcctgggtgacagagcaagactc s panTro5.chr7 156353699 139 + 166211670 tagccaggtgtgttgacgtgcgcccgtagtccccgctactcaggaggctgagacaggagaactgcttgagccagggaggcagaggctgcagtgag-tgaggtcgtgccac--aactccagcctgggcgacagagcaagactc i panTro5.chr7 C 0 C 0 s panPan2.chr7 155966784 139 + 162613886 tagccaggtgtgttgacgtgcgcccgtagtccccgctactcaggaggctgagacaggagaactgcttgagccagggaggcagaggctgcagtgag-tgaggtcgtgccac--aactccagcctgggcgacagagcaagactc i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840495 139 + 110113093 tagccaggtgtgttgacgtgagcctgtagtctccactactcaggaggctgagacacgagaactgcttgagccagggaggcagaggctgcagtgag-agaggttgtgccac--aactccagcctgggcgacagagcaagactc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457145 139 + 185818997 tagccatgtgtgttgacgtgcacctgtagtcccggctactcgggaggctgagacaggagaactgcttgagtcaggcaggcagagggtgcagtgag-tgaggtcacgccac--aactccagcctgggcaacagagcaagactc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184946876 139 + 192294377 tagccatgtgtgttgacgtgcacctgtagtcccggctactcgggatgctgagacaggagaactgcttgagtcaggcaggcagagggtgcagtgag-tgaggtcacgccac--aactccagcctgggcaacagagcaagactc i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915488 138 + 15219753 tagcca-gtgtgttgacgtgcacctgtagtcccggctacttgggaggctgagacaggagaactgcttgagtcaggcaggcagagggtgcagtgag-tgaggtcacgccac--aactccagcctgggcaacagagcaagactc i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559650 139 + 11639508 tagccatgtgtgttgacgtgcacctgtagtcccggctactcaggaggctgagacaggagaactgcttgagtcaggcaggcagagggtacagtgag-tgaggtcacgccac--aactccagcctgggcaacagagcaagactc i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411203 137 + 127223203 tag--ccgtgtgttgacgtgcaactgtagtcccagctacttgggaggctgagacaggagaactgcttgagtcagggaggcagagggtgcagtgag-tgaggtcacgccac--aactccagcctgggcaacagagcaagactc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537512 134 - 2854183 -----atgtgtgttgacgtgcacctgtagtcccggctactcgggaggctgagacaggagaactgcttgagtcaggcaggcagagggtgcagtggg-tgaggtcacgccac--aactccagcctgggcaacagagcaagcctc i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244065 139 + 27496150 tagccatgtgtgttgatgtgcacctgtagtcctggctactcgggaggctgagacaggagaactgcttgagtcagggaggcagagggtgcagtgag-tgaggtcacgccac--aactccagcctgggcaacagagcaagactc i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33697178 141 - 128169293 aagctgggcatgtttacatgagcctgtagtcccagctactcgaaaagctgagataggagaactgcttgaacctgggaggcagaggttgcagtgagccaaggtcacaccactgcactccagcctgggcaacagaccaa-actc i calJac3.chr8 I 11 C 0 s saiBol1.JH378140 17033579 142 + 19594188 tagctgggcatgcttacatgagcctgtagtcccagctactcgaaaggctaagataggagaactgcttgaacccgggaggcagaggttgtggtgagccaaggtcgcaccactgcactccagcctgggcaacagaccaagactc i saiBol1.JH378140 I 11 C 0 s cebCap1.NW_016107335v1 4921002 142 - 11686629 taggtgggcatgtttacatgagcctgtagtcccagctactcgaaaggctgagacaggagaactgcttgaacccgggaggcagaggttgcagtgagccaaggtcgcaccactgcactccagcctgggcaacagaccaagactc i cebCap1.NW_016107335v1 I 11 C 0 s aotNan1.NW_018506100v1 3270404 142 - 4527795 tagctgggcatgtttacatgagcctgtagtcccagctattcgaaaggctgagataggagaactgcttgaacctggtaggcagaggttgcagtgagccaaggtcgcaccactgcactccagcctgggcaacagaccaagactc i aotNan1.NW_018506100v1 I 16 C 0 e dasNov3.JH575209 1228037 520 + 1922530 I e canFam3.chr16 16056124 1619 + 59632846 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e otoGar3.GL873572 5485956 1733 - 12253515 I a score=108986.000000 s hg38.chrUn_KI270746v1 56275 32 + 66486 -aatctcaaag---------aaataaat---------aaaaataaaataaa s panTro5.chr7 156353838 41 + 166211670 -aatctcaaaataaaCAGataaataagt---------aaaaataaaataaa i panTro5.chr7 C 0 C 0 s panPan2.chr7 155966923 41 + 162613886 -aatctcaaaataaaCAGataaataagt---------aaaaataaaataaa i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840634 39 + 110113093 -aatctcaaaataaataaataaataaat-----------aaataaaataaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457284 38 + 185818997 -aatctcaaaataaaaaaataaa-aact-----------aaaaaaaaTAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947015 38 + 192294377 -aatctcaaaataaaaaaataaa-aact-----------aaaaaaaaTAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915626 38 + 15219753 -aatctcaaaataaaaaaataaa-aact-----------aaaaaaaaaaaa i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559789 38 + 11639508 -aatctcaaaataaaaaaataaa-aact-----------aaaaaaaaTAAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411340 39 + 127223203 -aattccaaaataaaaaaataaa-aact----------aaaaaaaaaTAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537646 38 - 2854183 -aatctcaaaataaaaaaataaa-aact-----------aaaaaaaaTAAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244204 37 + 27496150 -aatctcaaaataaaaaaataaa-aaat-----------aaaaaaaa-aaa i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33697319 27 - 128169293 -attatcaaaa-----------------------aaagaaagaaagaaaaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17033721 44 + 19594188 -agtatcaaaaaaagaaagaaag-aaag-----gaaagaaagaaagaaaAA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4921144 44 - 11686629 -aatatcaaaaaaaggaagaaag-gaag-----gaaagaaaGAAAGAAAAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3270546 48 - 4527795 -aatatcaaaaaaagaaagaaag-aaag-gaaagaaagaaagaaagaaaAA i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16057743 32 + 59632846 -AATTTCGTTG-AAATATTTAAT-ATTT-----------CAATGAA----- i canFam3.chr16 I 1619 C 0 s dasNov3.JH575209 1228557 45 + 1922530 AATTACCAAAATGTAGCTAAGAG-TACTTGTTTCCTTTTAAAAAAA----- i dasNov3.JH575209 I 520 I 6 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e otoGar3.GL873572 5485956 1733 - 12253515 I a score=299873.000000 s hg38.chrUn_KI270746v1 56307 32 + 66486 gaaaTATCTACTGCA------AATAATACGTTTCATAA s panTro5.chr7 156353879 32 + 166211670 gaaatGTCTACTGCA------AATAATACGTTTCATAA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155966964 32 + 162613886 gaaatGTCTACTGCA------AATAATACGATTCATAA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840673 32 + 110113093 gaaataTTTACTGCA------AATAATACGTTTCATAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457322 32 + 185818997 GAAATATCTCCTGCA------AATAATATGTTTCATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947053 32 + 192294377 GAAATATCTCCTGCA------AATAATATGTTTCATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915664 32 + 15219753 GAAATATCTCCTGCA------AATAATATGTTTCATAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559827 32 + 11639508 GAAATATCTACTGCA------AATAATACGTTTCATAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411379 32 + 127223203 GAAATATCTACTGCA------AATAATACGTTTCATAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537684 32 - 2854183 GAAATATCTACTGCA------AATAATACGTTTCATGA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244241 32 + 27496150 gaaataTCTACTGCA------AATAATACATTTCATAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33697346 32 - 128169293 GAGGTATCTACTGAA------AATAATACATTTCATTA i calJac3.chr8 C 0 I 300 s saiBol1.JH378140 17033765 32 + 19594188 GAGGTATCTACTGCA------AATAATACATTTCATTA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4921188 32 - 11686629 GAGGTATCTACTGCA------AATAATACATTTCATTA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3270594 32 - 4527795 GAGGTATCTACTGCA------AATAATACATTTCATTA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5487689 27 - 12253515 GAAATATTTACTGCA------AATA-----TATCATAG i otoGar3.GL873572 I 1733 I 1 s canFam3.chr16 16057775 27 + 59632846 -ACATATCTCATGGG------TTTAATACACTTA---- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1228608 38 + 1922530 GAAGTATCAACAGCAAAACCTAAAAATACATTTCATAG i dasNov3.JH575209 I 6 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=947072.000000 s hg38.chrUn_KI270746v1 56339 98 + 66486 AATGCTTAATAA--AAACTTTCAATACCACCATGAAAGCAATTAGAACATGAGGGTGTCTGAAGTAGATCATAGTAGTGTGATTACATTC-AATATCTTTC s panTro5.chr7 156353911 98 + 166211670 AATGCTTAATAA--AAACTTTCAATACCATCATGAAAGCAATTAGAACATGAAGGTGTCTGAACTAGATCATAGTAGTGTGATTACATTC-AATATCTTTC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155966996 98 + 162613886 AATGCTTAATAA--AAACTTTCAATACCATCATGAAAGCAATTAGAACATGAAGGTGTCTGAACTAGATCATAGTAGTGTGATTACATTC-AATATCTTTC i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840705 98 + 110113093 AATGCTTAATAA--AAACTTTCAATACCACCATGAAAGCAATTAGAACATGAGGGTGTCTGAACTAGATCACAGTAGTGTGATTACATTA-AATATCTTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457354 99 + 185818997 AATGCCTAATAG--AATCTTTCAATACCAACATGAAAGCAATTAGAACATGAAGGTGTCTGAACTAGATCACAGTAGTGTGATTACATTTAAATATCTTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947085 99 + 192294377 AATGCCTAATAG--AATCTTTCAATACCAACATGAAAGCAATTAGAACATGAAGGTGTCTGAACTAGATCACAGTAGTGTGATTACATTTAAATATCTTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915696 99 + 15219753 AATGCCTAATAG--AATCTTTCAATACCAACATGAAAGCAATTAGAACATGAAGGTGTCTGAACTAGATCACAGTAGTGTGATTACATTTAAATATCTTTC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559859 99 + 11639508 AATGCCTAATAG--AATCTTTCAATACCAACATGAAAGCAATTAGAACATGAAGGTGTCTGAACTAGATCACAGTAGTGTGATTACATTTAAATATCTTTC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411411 99 + 127223203 AATGCCTAATAG--AATCTTTCAATACCAACATGAAAGCAATTAGAACATGAAGGCGTCTGAACTAGATCATAGTAGTGTGATTACATTTAAATATCTTTC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537716 99 - 2854183 AATGCCTAATAG--AATCTTTCAATACCAACATGGAAGCAATTAGAACATGAAGGTGTCTGAACTAGATCACAGTAGTGTGATTACATTTAAATATCTTTC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244273 99 + 27496150 AATGCCTAATAA--AATCTTTCAATACCAACATGAAAGCAATTAGAACATGAAGGTGTCTGAACTAGATCATAGTAGTGTGATTACATTTAAATATCTTTC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33697678 98 - 128169293 aaTGTTTAATAA--AAACTTTCAATACCACCAAGAAAGCAATTAGAACATGAGGGTGCCTGAACTAGATCACAGTTATGTGATTACATTA-AGTATATTTC i calJac3.chr8 I 300 C 0 s saiBol1.JH378140 17033797 98 + 19594188 AATGTTTAATAA--AAACTTTCAATACCACCAAGAAAGCAATTAGAACATGAGGGTGCCTGAACTAGATCATAGTTGTGCGATTACATTA-AGTATCTTTC i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4921220 98 - 11686629 AATATTTAATAA--AAACTTTCAATACCACCAAGAAAGCAATTAGAACATGAGGGTGCCTGAACTAGATCATAGTTATGTGATTACATTA-AGTATCTTTC i cebCap1.NW_016107335v1 C 0 I 638 s aotNan1.NW_018506100v1 3270626 91 - 4527795 AATGTTTAATAA--A-------AATAACACCAAGAAAGCAATTAGAACATGAGGGTGCCTGAACTAGATCATAGTTATGTGATTACACTA-AGTATCTTTC i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5487717 88 - 12253515 TATATTTA--------CACTTCAGCACCACCATGAAAACAATTAGCACACGAAAG----TGAACTAGATTGCAGTCATGTGATTACATTA-AATTTCTTCA i otoGar3.GL873572 I 1 C 0 s canFam3.chr16 16057802 80 + 59632846 ------------------TTTCAATACTATCATGAGAGCACTTAGCACAT--ACGTGTCTAGAGCAGACCATAGTCATGTGATTATATGA-AATACTTTTC i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1228646 98 + 1922530 AATGTTTAGTAATTATTACTTATATGCCACCATGAAAGGAATTAGTATCTGAGGG--TTTGAAATAGATCATAGTCACCTGGTAACATTT-AAAACCTTTC i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=148146.000000 s hg38.chrUn_KI270746v1 56437 16 + 66486 TATAAGACGTGATGAT s panTro5.chr7 156354009 16 + 166211670 TATAAGACGTGATGAT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967094 16 + 162613886 TATAAGACGTGATGAT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840803 16 + 110113093 TATAAGATGTGATGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457453 16 + 185818997 TATAAGATGTGATGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947184 16 + 192294377 TATAAGATGTGATGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915795 16 + 15219753 TATAAGATGTGATGAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559958 16 + 11639508 TATAAGATGTGATGAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411510 16 + 127223203 TATAAGATGTGATGAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537815 16 - 2854183 TATAAGATGTGATGAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244372 16 + 27496150 TATAAGATGTGATGAT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33697776 16 - 128169293 TGTAAGATGTGATGAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17033895 16 + 19594188 TGTAAGATGTGATGAT i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3270717 16 - 4527795 TATAAGATGTGATGAT i aotNan1.NW_018506100v1 C 0 I 1495 s otoGar3.GL873572 5487805 15 - 12253515 TGCAAAATCTGATAA- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16057882 16 + 59632846 CATAAAACAAGGTGAT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1228744 16 + 1922530 CATTAAATACAATAAT i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e cebCap1.NW_016107335v1 4921318 638 - 11686629 I a score=94814.000000 s hg38.chrUn_KI270746v1 56453 16 + 66486 ACATACAGGGTAAATC s panTro5.chr7 156354025 16 + 166211670 ACATACAGGGTAAATA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967110 16 + 162613886 ACATACAGGGTAAATA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840819 16 + 110113093 ACATACAGGGTAAATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457469 16 + 185818997 ACATACAGGGTAAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947200 16 + 192294377 ACATACAGGGTAAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915811 16 + 15219753 ACATACAGGGTAAATA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559974 16 + 11639508 ACATACAGGGTAAATA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411526 16 + 127223203 ACATACAGGGTAAATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537831 16 - 2854183 ACATAGGGGGTAAATA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244388 16 + 27496150 ACATACAGGGTAAATA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33697792 9 - 128169293 -------GCGTAAAGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17033911 9 + 19594188 -------GGGTAAAGA i saiBol1.JH378140 C 0 I 315 s otoGar3.GL873572 5487820 16 - 12253515 ATATGTATTATAAAAT i otoGar3.GL873572 C 0 I 1 s canFam3.chr16 16057898 16 + 59632846 ACAAATAGGATAAATA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1228760 9 + 1922530 ----ACAA---AAATA i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e aotNan1.NW_018506100v1 3270733 1495 - 4527795 I e cebCap1.NW_016107335v1 4921318 638 - 11686629 I a score=61719.000000 s hg38.chrUn_KI270746v1 56469 7 + 66486 ATACAAG s panTro5.chr7 156354041 7 + 166211670 ATACAAG i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967126 7 + 162613886 ATACAAG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840835 7 + 110113093 ATACAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457485 7 + 185818997 ATACAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947216 7 + 192294377 ATACAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915827 7 + 15219753 ATACAAG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559990 7 + 11639508 ATACAAG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411542 7 + 127223203 ATACAAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537847 7 - 2854183 ATGCAAG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244404 7 + 27496150 ATACAAG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33697801 7 - 128169293 ATATAAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17034235 7 + 19594188 aTATAAG i saiBol1.JH378140 I 315 C 0 s otoGar3.GL873572 5487837 7 - 12253515 ATAAAGA i otoGar3.GL873572 I 1 C 0 s canFam3.chr16 16057914 7 + 59632846 ACAGAAG i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1228769 7 + 1922530 ATACAAG i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e aotNan1.NW_018506100v1 3270733 1495 - 4527795 I e cebCap1.NW_016107335v1 4921318 638 - 11686629 I a score=14151.000000 s hg38.chrUn_KI270746v1 56476 2 + 66486 AA- s panTro5.chr7 156354048 2 + 166211670 AA- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967133 2 + 162613886 AA- i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840842 2 + 110113093 AA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457492 2 + 185818997 AA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947223 2 + 192294377 AA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915834 2 + 15219753 AA- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559997 2 + 11639508 AA- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411549 2 + 127223203 AA- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537854 2 - 2854183 AA- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244411 2 + 27496150 AA- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33697808 2 - 128169293 AA- i calJac3.chr8 C 0 I 514 s saiBol1.JH378140 17034242 2 + 19594188 AA- i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3272228 2 - 4527795 aa- i aotNan1.NW_018506100v1 I 1495 C 0 s otoGar3.GL873572 5487844 2 - 12253515 AA- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16057921 1 + 59632846 -A- i canFam3.chr16 C 0 I 1 s dasNov3.JH575209 1228776 2 + 1922530 -AT i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e cebCap1.NW_016107335v1 4921318 638 - 11686629 I a score=3042864.000000 s hg38.chrUn_KI270746v1 56478 373 + 66486 GACCTAAGATTATT---ATCTCAGAATTTCCTAATTAGAATGG--GAATACAATTGTGCAATGAGAGAAATGGACTGAAGACAGAAATAAAAACaaatgttatgatttaatatgacaaatttaaaa---tttccactttaTTTTCCACCATTTTTAAAGAGCATTCCTTATAGTAT---TAATTTTAATGCATTTTTAAAAATCAGTAAGACAAGTAG------CACATTTCTCTAGTTCAGGACTCCACT--T----TCAGGGTTACAGTTAAAGATG-ATC----CT-AGAAG--TGCATtttaattggtctagggtaaggtcattagcttg--atgttctaaaatctactgagt-tgattacaatatgtgtcagtgtcaataaccactTTCTT---------------------------------------------------------------------------------------------AAACCCAGGTC s panTro5.chr7 156354050 373 + 166211670 GAGCTAAGATTATT---ATCTCAGAATTTCCTAATTAGAATGG--GAATACAACTGTGCAATGAGAGAAATGGACTGAAGACAGAAATAAAAACAAATGTTATGATTTAATATGACAAATTTTAAA---TTTCCACTTTATTTTCCACCATTTTTAAAGAGCATTCCTTACAGTAT---TCAGTTTAATGCATTTTTAAAAATCAGTAAGACAAGTAG------CACATTTCTCTAGTTCAGAACTCCGCT--T----TCAGGGTTACAGTTAAAGATG-ATC----CT-AGAAG--TGCATtttaattggtctagggtagggccattagcttg--atgttctaaaatctaccgagt-tgattacagtatgtggcagtgtcaataatcactTTCTT---------------------------------------------------------------------------------------------AAACCCAGGTC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967135 373 + 162613886 GAGCTAAGATTATT---ATCTCAGAATTTCCTAATTAGAATGG--GAATACAACTGTGCAATGAGAGAAATGGACTGAAGACAGAAATAAAAACAAATGTTATGATTTAATATGACAAATTTTAAA---TTTCCACTTTATTTTCCACCATTTTTAAAGAGCATTCCTTACAGTAT---TCAGTTTAATGCATTTTTAAAAATCAGTAAGACAAGTAG------CACATTTCTCTAGTTCAGAACTCCGCT--T----TCAGGGTTACAGTTAAAGATG-ATC----CT-AGAAG--TGCATtttaattggtctagggtagggccattagcttg--atgttctaaaatctaccgagt-tgattacagtatgtggcagtgtcaataatcactTTCTT---------------------------------------------------------------------------------------------AAACCCAGGTC i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102840844 372 + 110113093 GACCTAAGATTATT---ATCTCAGAATTTCCTAATTAGAATGG--GAATACAACTGTGCAATGAGAAAAATGGACTGAAGGCAGAAATAAAAACaaatgttatgatttaatatgacaaatttaaaa---tttccactttaTTTTCCACCATTTTTAAAGAGCATT-CTTATAGTAT---TAAGTTTAATGCATTTTTAAAAATCAGTAAGACAAGTAG------CACATTTCTCTAGTTCAGGACTCCGCT--T----TCAGGGTTACAGTCAAAGATG-ATC----CT-AGAAG--TGCATtttaattggtctagggtagggccattagcttg--atgttctaaaatctaccgagt-tgattacaatatgtggcagtgtcaataaccactTTCTT---------------------------------------------------------------------------------------------AAACCCAGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457494 376 + 185818997 GACCTAAGATTATTATGATCTCAGAATTTCCTAATCAGAATGG--GAATACAACTGTGCAATGAGAGAAATGGACTAAAGACAGAAATAAAAACAAATGATATGATTTAATATGATAAATTTAAAA---TTTCCACTTTATTTTCCACCATTTTAAAAGACCATTCCTTATAGTAT---TAAGTTTAATGCATTTTTAAAAATCAATAAAACAAGTAG------CACATTTCTCTAGTTCAGGACTCCGCT--T----TCAGGGTTATAGTCAAAGATG-ATC----CT-AGAAG--TGCATtttaattggtctagggtaggaccattagactg--atgctctaaaatctaccaagc-tgattacaatatgtggcagtgtcaataaccactTTCTT---------------------------------------------------------------------------------------------AAACCCAAGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947225 376 + 192294377 GACCTAAGATTATTATGATCTCAGAATTTCCTAATCAGAATGG--GAATACAACCGTGCAATGAGAGAAATGGACTAAAGACAGAAATAAAAACAAATGATATGATTTAATATGATAAATTTAAAA---TTTCCACTTTATTTTCCACCATTTTAAAAGACCATTCCTTATAGTAT---TAAGTTTAATGCATTTTTAAAAATCAATAAAACAAGTAG------CACATTTCTCTAGTTCAGGACTCCGCT--T----TCAGGGTTATAGTCAAAGATG-ATC----CT-AGAAG--TGCATtttaattggtctagggtaggaccattagactg--atgctctaaaatctaccaagc-tgattacaatatgtggcagtgtcaataaccactTTCTT---------------------------------------------------------------------------------------------AAACCCAAGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7915836 376 + 15219753 GACCTAAGATTATTATGATCTCAGAATTTCCTAATCAGAATGG--GAATACAACCGTGCAATGAGAGAAATGGACTAAAGACAGAAATAAAAACAAATGATATGATTTAATATGATAAATTTAAAA---TTTCCACTTTATTTTCCACCATTTTAAAAGACCATTCCTTATAGTAT---TAAGTTTAATGCATTTTTAAAAATCAATAAAACAAGTAG------CACATTTCTCTAGTTCAGGACTCTGCT--T----TCAGGGTTATAGTCAAAGATG-ATC----CT-AGAAG--TGCATtttaattggtctagggtaggaccattagactg--atgctctaaaatctaccaagc-tgattacaatatgtggcagtgtcaataaccactTTCTT---------------------------------------------------------------------------------------------AAACCCAAGTC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9559999 376 + 11639508 GACCTAAGATTATTATGATCTCAGAATTTCCTAATCAGAAAGG--GAATACAACCGTGCAATGAGAGAAATGGACTAAAGACAGAAATAAAAACAAATGATATGATTTAATATGATAAATTTAAAA---TTTCCACTTTATTTTCCACCATTTTAAAAGACCATTCCTTATAGTAT---TAAGTTTAATGCATTTTTAAAAATCAATAAAACAAATAG------CACATTTCTCTAGTTCAGGACTCCGCT--T----TCAGGGTTATAGTCAAAGATG-ATC----CT-AGAAG--TGCATtttaattggtctagggtaggaccattagactg--atgctctaaaatctaccaagc-tgattacaatatgtggcagtgtcaataaccactTTCTT---------------------------------------------------------------------------------------------AAACCCAAATC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411551 378 + 127223203 GACCTAAGATTATTATGATCTCAGAATTTCCTAATTAGAATGG--GAATACAACCGTGCAATGAGAGAAATGGACTAAAGACAGAAATAAAAACAAATGATATGATTTAATATGATAAATTTAAAA---TTTCCACTTTATTTTCTACCATTTTTAAAGACCATTCCTTATAGTAT---TAAGTTTAATGCATTTTTAAAAATCAATAAAACAAGTAG------CACATTTCTCTAGTTCAGGACTCTGCTTGT----TCAGGGTTATAGTCAAAGATG-ATC----CT-AGAAG--TGCATtttaatcggtcgagggtaggaccattagactg--atgttctaaaatctaccaagc-tgattacaatttgtggcagtgtcaataaccactTTCTT---------------------------------------------------------------------------------------------AAACCCAAATC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1537856 372 - 2854183 GACCTAAGATTATTATGATCTCAGAATTTCCTGATCAGAATGG--GAATACAACCGTGCAATGAGAGAAATGGACTAAAGACAGAAATAAAAACAAATGATATGATTTAATATGATAAATTTAAAA---TTTCCACTTTATTTTCCACCATTTTAAAAGACCATTCCTTATAGTAT---TAAGTTTAATGCATTTTTAAAAATCAATAAAACAAATAG------CACATTTCTCTAGTTCAGGACTCCGCT--T----TCAGGGGTATAGTCAAAGATG-ATC----CT-AGAAG--TGCATtttaattggtctagggtaggaccattagactg--atgctctaaaatctaccaagt-tgat----atatgtggcagtgtcaataaccactTTCTT---------------------------------------------------------------------------------------------AAACCCAAGTC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244413 380 + 27496150 GACCTAAGATTATTATGATCTCAGAATTTCCTAATTAGAATGG--GAATACAACCGTGCAATGAGAGAAAAGGACTAAAGACAGAAATAAAAACAAATGATATGATTTAATATGATAAATTTTAAA---TTTCCACTTTATTTTCCACCATTTTTAAAGACCATTCCTTATAGTAT---TAAGTTTAATGCATTTTTAAAAATCAATAAAACGAGTAG------CACATTTCTCTAGTTCAGGACTCCGCT--T----TCAGGGTTACAGTCAAAGATG-ATCCTAGCT-AGAAG--TGCATtttaattggtctagggtaggaccattagactg--atgttctaaaatctaccaagt-tgattacaatatgtggcagtgtcaataagcactTTCTT---------------------------------------------------------------------------------------------AAACCCAAGTC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33698324 357 - 128169293 GACCTAACATTATTATTATCTCAAAATTTCCAAATTAGAATGG--AAATACAACTGTGGAATGAGAGAAATGGACTAAAGACAAAAATACA---AAATAATATGACTTAATACGACAAATTTAATA---CT------------TCCACCATTTTTAAAGAGCAACCCATA---------TAAGTTTAATGCATTTTTAAAAATCAATAAAATAAGTTG------CATATTTCTCCAGTTCAGGACTCTGCT--T----TCAGGGTTACAGTCAAAGATG-atc----ttcagaag-ctgcattttaaatggtctacagtagggccattagattg--atgttataaaatctaccgagg-tgatcacaatatgtgacagtgtcaataaccactTTCTT---------------------------------------------------------------------------------------------AAACCCAAATC i calJac3.chr8 I 514 C 0 s saiBol1.JH378140 17034244 357 + 19594188 GACCTAACATTATTATTATCTTAAAATTTCCTAATTAGAATGG--AAATACAACTGTGGAATGAAAGAAATGCACTAAAGAAAAAAATACA---AAATAATACGACTTAATATGATAAATTTAACA---TT------------TCCACCATTTTTAAAGAGCAATCCATG---------TCAGTTTAATGCATTTTTAAAAATCAATAAAATGAGTTG------CATATTTCTCCAGTTGAGGAGTCCGCT--T----TCAGGGTTACAGTCAAAGATG-atc----ttcagaag-ctgcattttcatttgcctacggtagagccattagattg--atgttctaaaatctaccgagg-tgatcacaatatgtgacagtgtcaataaccactTTCTT---------------------------------------------------------------------------------------------AAACCCAAGTC i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3272230 347 - 4527795 GACGTAAC---ATTATTATCTCAAAATTTCCTAATTAGAATAG--AAATACAACTGTGGAATGAGAGAAATGGACTAAAGACAAAAATACA---AAATAATATGACTTAATATGATAAATTTAACA---TT--------------CACCATTTTTAAAGAGCAATCCATA-------------TTTAACACATTTTTAAAAATCAAT-AAATGAGTTG------CATATTTCTCTAGTTCAGGACTCCGTT--T----TCAGGGTTAGAGTCAAAGATG-ATC----TTCAGAAG-CTGCATTGTAATTGGTCTACAGTAGGGCCATTAGATTG--ATGTTCTAAAATCTACCGAGGTTGATCACAATA-GTGACAGTGTCAATAACCACCTTCTT---------------------------------------------------------------------------------------------AAACCCAAGTC i aotNan1.NW_018506100v1 C 0 I 10 s otoGar3.GL873572 5487846 438 - 12253515 -------GATTACTATAATCTCAGAATTTCTGAATTAGAATGGATAAATGCAAC-ATGGAAT--AAGAAATGGAATGAAGAC--AAATAAAAACAAA---TATTATTTACTATAGTAAA-TTAAAA---TTTCTGCTCCATTTTCTACTACTTACTACGAGCATTTCCTCCTGTACAGATATGTCTGATGC----------------------AGTAA------CATATTTCTCTAATTCAGGACTCCACT--T----TCAAGGTTCCAGTTGAAGAAA-acc----ct-cggagattgtgttttaatcagtctagggcagggctaccacaatg--gtgttctaaaagccccctaga-tgattACAGTACGTGACAGCTTCAATAAACACAGTTTTGTTAAAgagacagggtgtcactatgattgcccaagttggaatacagtggttcaatcacagctcattaacgcctggctcttgggctcaaATATCAAACCCAAGTC i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16057923 367 + 59632846 AGACTGAGATTACT---ATCTCAGAATTTCCAAATTAAAATGGATAAGTAGAGCTGTGGAATGAGAGAAA-----TAAATAGAAAATTAAAAACACACTATGTTATTTGATATGCTAAGATAAAAAAATTTTCCATCCTATTTTCCACTGCTTTTTAGAAGCATTTCTTGTAG------AAAGTCTCATGCAT-----AAAAGTAACAAC---AGTAG------CATATTTCTCTAATTCAGGACTCTACT--TACTACCAAGGGTACAGTGAAAGAAG-AGT----GT-cagag--gctgttttaattggtgcaaggtggagtcattgcaccaatatgtttttaaagctccccagg-cgattataacatgcagTTG-GCCAATAACAACTTTTCT---------------------------------------------------------------------------------------------AAACCTAAGGT i canFam3.chr16 I 1 C 0 s dasNov3.JH575209 1228778 373 + 1922530 GTACTAAGATTACTA--ATCTCAGAGTTTCCAAATTAGACTGGGTAATTACAACTGTGGAATGAGTGAAACAGAATAAGGGCTGAAATG-----AAAGGATATGATTTA-TACGATGaatttaaat---tttt--tttcatttattactatatttttaGAGCACTCCTTGTGGCAT---TATTTCTATTGTAT--TAAAAAATTAGTAAAATAAAGAGTACTACCACATTTCTCTAATTGAAGCTTCCGTT--T----CCAGAGTTAAGGTGAAAGAAGCATC----AT-gagac--tgtgtt-taattcatc-atggtggggctattgcactggtattttttaaaagctctccagt-tgattataatatgggacaaggtcaataactactTTACT---------------------------------------------------------------------------------------------CAATACAAGAT i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e cebCap1.NW_016107335v1 4921318 638 - 11686629 I a score=98290.000000 s hg38.chrUn_KI270746v1 56851 12 + 66486 GCAAAGCACATA s panTro5.chr7 156354423 12 + 166211670 GCAAAGTACATA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967508 12 + 162613886 GCAAAGTACATA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102841216 12 + 110113093 GCAAAGTACATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457870 12 + 185818997 GCAAAGTACATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947601 12 + 192294377 GCAAAGTACATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916212 12 + 15219753 GCAAAGTACATA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9560375 12 + 11639508 GCAAAGTACATA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411929 12 + 127223203 GCAAAGTACATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538228 12 - 2854183 ACAAAGTACATA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244793 12 + 27496150 GCAAAGTACATA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33698681 12 - 128169293 CCAAAGTACATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17034601 12 + 19594188 CCAGAGTACATA i saiBol1.JH378140 C 0 C 0 s otoGar3.GL873572 5488284 12 - 12253515 TCAAAACAGACA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16058290 12 + 59632846 TCAAAGTGGATA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1229151 12 + 1922530 CCAATGTAGATA i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e aotNan1.NW_018506100v1 3272577 10 - 4527795 I e cebCap1.NW_016107335v1 4921318 638 - 11686629 I a score=99372.000000 s hg38.chrUn_KI270746v1 56863 14 + 66486 TACCTATAGAAA-TG s panTro5.chr7 156354435 14 + 166211670 CACCTATAAAAA-TG i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967520 14 + 162613886 CACCTATAAAAA-TG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102841228 14 + 110113093 TACCTATAAAAA-TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457882 14 + 185818997 AACCTACAAAAA-TG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947613 14 + 192294377 AACCTACAAAAA-TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916224 14 + 15219753 AACCTACAAAAA-TG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9560387 14 + 11639508 AACCTACAAAAA-TG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411941 14 + 127223203 AACCTACAAAAA-TG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538240 14 - 2854183 AACCTACAAAAA-TG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244805 14 + 27496150 AACCTACAAAAA-TG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33698693 12 - 128169293 TACCTATAAAAA--- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17034613 12 + 19594188 TACCTATAAAAA--- i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3272587 12 - 4527795 TACCTATAAAAA--- i aotNan1.NW_018506100v1 I 10 C 0 s otoGar3.GL873572 5488296 15 - 12253515 TTCCTATAAAAAACA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16058302 14 + 59632846 TACTCATAAACA-TA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1229163 14 + 1922530 TACCTACAAAAA-TA i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e cebCap1.NW_016107335v1 4921318 638 - 11686629 I a score=38290.000000 s hg38.chrUn_KI270746v1 56877 6 + 66486 TTGAAA s panTro5.chr7 156354449 6 + 166211670 CTGAAA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967534 6 + 162613886 CTGAAA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102841242 6 + 110113093 CTGAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457896 6 + 185818997 CTGAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947627 6 + 192294377 CTGAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916238 6 + 15219753 CTGAAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9560401 6 + 11639508 CTGAAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411955 6 + 127223203 CTGAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538254 6 - 2854183 CTGAAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244819 6 + 27496150 CTGAAA i colAng1.NW_012115154v1 C 0 C 0 s otoGar3.GL873572 5488311 6 - 12253515 CTAAAA i otoGar3.GL873572 C 0 C 0 s dasNov3.JH575209 1229177 6 + 1922530 GTGAAA i dasNov3.JH575209 C 0 I 1 e canFam3.chr16 16058316 0 + 59632846 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e aotNan1.NW_018506100v1 3272599 0 - 4527795 C e cebCap1.NW_016107335v1 4921318 638 - 11686629 I e saiBol1.JH378140 17034625 0 + 19594188 C e calJac3.chr8 33698705 0 - 128169293 C a score=196280.000000 s hg38.chrUn_KI270746v1 56883 32 + 66486 A-TGg------------------------------------------gccaggcgctgtggggc---------------------------tcacacctgta----------------------------------- s panTro5.chr7 156354455 33 + 166211670 AATGg------------------------------------------gccaggcgctgtggggc---------------------------tcacacctgta----------------------------------- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967540 33 + 162613886 AATGg------------------------------------------gccaggcgctgtggggc---------------------------tcacacctgta----------------------------------- i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102841248 33 + 110113093 AATGg------------------------------------------gccaggcgctgtggggc---------------------------tcacacctgta----------------------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457902 33 + 185818997 AATGG------------------------------------------Tccaggcgctgtggggc---------------------------tcacacctgta----------------------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947633 33 + 192294377 AATGg------------------------------------------gccaggcgctgtggggc---------------------------tcacacctgta----------------------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916244 33 + 15219753 AATGg------------------------------------------gccaggcgctgtggggc---------------------------tcacacctgta----------------------------------- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9560407 33 + 11639508 AATGg------------------------------------------gccaggcactgtgggtc---------------------------tcacaactgta----------------------------------- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411961 32 + 127223203 AATGg------------------------------------------gcccggcgctgtgggg----------------------------tcacacctgta----------------------------------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538260 33 - 2854183 AATGg------------------------------------------gccaggcgctgtggggc---------------------------tcacaactgta----------------------------------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244825 33 + 27496150 AATGg------------------------------------------gccaggcgctgtggggc---------------------------tcacacctgta----------------------------------- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33698705 31 - 128169293 --TGg------------------------------------------gccaggccctgtggggc---------------------------tcatacctgta----------------------------------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17034625 31 + 19594188 --TGg------------------------------------------gccaggcactgtgcggc---------------------------tcatacctgta----------------------------------- i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3272599 31 - 4527795 --TGA------------------------------------------gccaggcactgtgaggt---------------------------tcatacctgta----------------------------------- i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5488317 137 - 12253515 AGTggctcagcacccgtagctcaatggttactgtgccagccacatataccaaggattgtgagtttgaacctggcccgagcctgctaaacaatgacaactgtaacaaaaaatagtgggcgttgtggcaggtgcctgta i otoGar3.GL873572 C 0 C 0 e dasNov3.JH575209 1229183 1 + 1922530 I e canFam3.chr16 16058316 0 + 59632846 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e cebCap1.NW_016107335v1 4921318 638 - 11686629 I a score=301883.000000 s hg38.chrUn_KI270746v1 56915 37 + 66486 atcccagcactctgggagacccgagatgggaggatca s panTro5.chr7 156354488 37 + 166211670 atcccagcactctgggagacccgagatggaaggatcg i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967573 37 + 162613886 atcccagcactctgggagacccgagatggaaggatcg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 6691 37 + 12255 atcccagcactctgggagacccaagatgggaggattg i gorGor5.CYUI01009314v1 N 0 C 0 s nomLeu3.chr13 102841281 37 + 110113093 atcctagcactctgggagacccgagatgggaggttcg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457935 37 + 185818997 atcccagcactctgggagacccaagatggcaggatcg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947666 37 + 192294377 atcccagcactctgggagacccaagatggcaggatcg i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916277 37 + 15219753 atcccagcactctgggagacccaagatggcaggatcg i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9560440 37 + 11639508 atcccagcactctgggagacccaagatggcaggatcg i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120411993 37 + 127223203 atcccagcactctgagagacccaagatgggaggatcg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538293 37 - 2854183 atcccagcactctgggagacccaagatggcaggatcg i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244858 37 + 27496150 atcccagcactctgggagacccaagatgggaggatcg i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33698736 36 - 128169293 atcccagcactttggaagg-ccaagatggggggaatg i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17034656 36 + 19594188 atcccagcactttgggagg-ccaagattgggggaatg i saiBol1.JH378140 C 0 C 0 s aotNan1.NW_018506100v1 3272630 36 - 4527795 atcccagcactttgtgagg-ccaagatgggggcaatg i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5488454 36 - 12253515 gtcccagctacatgggtgg-ctaaggcaagagaattg i otoGar3.GL873572 C 0 C 0 e dasNov3.JH575209 1229183 1 + 1922530 I e canFam3.chr16 16058316 0 + 59632846 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e cebCap1.NW_016107335v1 4921318 638 - 11686629 I a score=676862.000000 s hg38.chrUn_KI270746v1 56952 83 + 66486 cttgaggccaggactttgtaaccagcctggtct----------------------------acacagcaagacccccatctctata-----------------------aaaaaataaaaaATATTT--------------------------------------------------------------------------TTAAATG s panTro5.chr7 156354525 83 + 166211670 cttgaggccaggagttcgtaaccagcctggtct----------------------------acacagcaagacccccatctctata-----------------------aaaaaataaaaaATATTT--------------------------------------------------------------------------TTAAATG i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967610 83 + 162613886 cttgaggccaggagttcgtaaccagcctggtct----------------------------acacagcaagacccccatatctata-----------------------aaaaaataaaaaATATTT--------------------------------------------------------------------------TTAAATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 6728 83 + 12255 cttgaggccaggactttgtaaccagcctggtct----------------------------acacagcaagacccccatctctata-----------------------aaaaaataaaaaATATTT--------------------------------------------------------------------------TTAATTG i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102841318 83 + 110113093 cttgaggccaggagttcgtaaccagcctggtct----------------------------acacagcaagacccccatctctata-----------------------aaaaaataaaaaaTATTT--------------------------------------------------------------------------TTAAATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178457972 80 + 185818997 cttgaggccaggagtttgtaaccatcctagtct----------------------------acacagcaagatccccatctctatt-----------------------aaaaaat---aAATATTT--------------------------------------------------------------------------TTAAATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947703 80 + 192294377 cttgaggccaggagtttgtaaccagcctagtct----------------------------acacagcaagatccccatctctatt-----------------------aaaaaat---aAATATTT--------------------------------------------------------------------------TTAAATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916314 80 + 15219753 cttgaggccaggagtttgtaaccagcctagtct----------------------------acacagcaagatccccatctctatt-----------------------aaaaaat---aAATATTT--------------------------------------------------------------------------TTAAATG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9560477 80 + 11639508 cttgaggccaggagtttgtaaccagcctagtct----------------------------acacagcaagatccccatctctatt-----------------------aaaaaat---aAATATTT--------------------------------------------------------------------------TTAAATG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120412030 83 + 127223203 cttgaggccaggagtttgtaaccagcctggtct----------------------------acacagcaagatccccatctctatt-----------------------aaaaaataaaaaATATTT--------------------------------------------------------------------------TTAAACG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538330 80 - 2854183 cttgaggccaggagtttgtaaccagcctagtct----------------------------acacagcaagatccccatctctatt-----------------------aaaaaat---aAATATTT--------------------------------------------------------------------------TTAAATG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244895 83 + 27496150 cttgaggccaagagtttgtaaccaggctgctct----------------------------acacagcaagactcccatctctata-----------------------aaaaaataaaaaATATTT--------------------------------------------------------------------------TTAAACG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33698772 90 - 128169293 cttgagaccaggagtttgtaaccagcctggtct----------------------------acatagcaagacctccatctctatt----------------tataaaaaaaaaaaaaaaAAGTTTT--------------------------------------------------------------------------TTAAATG i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17034692 106 + 19594188 cttaagacgaggactttgtaaccaacctggtct----------------------------acatagcaagacccccatctctaTTATaaaacaaaacaaaacaaaacaaaacaaaaAAACACTTTT--------------------------------------------------------------------------TTAAATG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4921956 90 - 11686629 cttgagaccaggagtttgtaaccaacctgatct----------------------------acatagcaagacccccatctctatt----------------taaaaaaaaaaaaaaaAAATTTTTT--------------------------------------------------------------------------TTAAATG i cebCap1.NW_016107335v1 I 638 C 0 s aotNan1.NW_018506100v1 3272666 88 - 4527795 cttgagatcaggagtttgtaaccagcctggtct----------------------------acatagcaagaccccca-ctctatt----------------t-taaaaaaaaaaaaaaaAAGTTTT--------------------------------------------------------------------------TTAGCTG i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5488490 182 - 12253515 cttgagcccaagagtttgaggttgctgtgagctgtgatgctatagcactctaccaagggtgacatagtgaaa---ctgtctcaaaa-----------------------acaagataaaaaGCATTTaaatagctgggcattgtggcgggtgcctgtagtcccacctactcaggaggctgaggcaagagaatcacctaagcccaaggg i otoGar3.GL873572 C 0 C 0 e dasNov3.JH575209 1229183 1 + 1922530 I e canFam3.chr16 16058316 0 + 59632846 C e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=58927.000000 s hg38.chrUn_KI270746v1 57035 7 + 66486 CTGA---------------------------------------------AAA s panTro5.chr7 156354608 7 + 166211670 CTGA---------------------------------------------AAA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967693 7 + 162613886 CTGA---------------------------------------------AAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 6811 7 + 12255 CTGA---------------------------------------------AAA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102841401 7 + 110113093 CTGA---------------------------------------------AAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178458052 7 + 185818997 CTGA---------------------------------------------AAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947783 7 + 192294377 CTGA---------------------------------------------AAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916394 7 + 15219753 CTGA---------------------------------------------AAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9560557 7 + 11639508 CTGA---------------------------------------------AAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120412113 7 + 127223203 CTGA---------------------------------------------AAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538410 7 - 2854183 CTGA---------------------------------------------AAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244978 7 + 27496150 CTGA---------------------------------------------AAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33698862 7 - 128169293 TTGA---------------------------------------------GAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17034798 7 + 19594188 TTGA---------------------------------------------AAA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4922046 7 - 11686629 TTGA---------------------------------------------AAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3272754 7 - 4527795 TTGA---------------------------------------------AAA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5488672 52 - 12253515 ctggaggttgctgtgagctgtgacatcatagcactctacagagggcgacaaa i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16058316 7 + 59632846 CTGA---------------------------------------------AAA i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1229183 1 + 1922530 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=1171332.000000 s hg38.chrUn_KI270746v1 57042 109 + 66486 ATGAAATACT------------------AAATTATTTATGAATATATAACTTCAATAAAA--GATGAGAAAATACA-----ACTAGGTCATTAGGACAATTTGTATGAAACA-ATAT--CCAATTTGCTG----TCTGTTA s panTro5.chr7 156354615 109 + 166211670 ATGAAATACT------------------AAATTATTTATGAATATATAACTTCAATAAAA--GATGAGAAAATACA-----ACTAGGTCATTAGGACAATTCGTATGAACCA-ATAT--CCAATTTGCTG----TCTGTTA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967700 109 + 162613886 ATGAAATACT------------------AAATTATTTATGAATATATAACTTCAATAAAA--GATGAGAAAATACA-----ACTAGGTCATTAGGACAATTTGTATGAACCA-ATAT--CCAATTTGCTG----TCTGTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 6818 109 + 12255 ATGAAATACT------------------AAATTATTTATGAATATATAACTTCAATAAAA--GATGAGAAAATGCA-----CCTAGGTCATTAGGACAATTTGTATGAAACA-ATAT--CCAATTTGCTG----TCTGTTA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102841408 109 + 110113093 ATGAAATACT------------------AAATTATTTATAAATATATAACTTCAATAAAA--GATGAGGAAATACA-----ACTAGGTCATTAGGACAATTTGTATGAAACA-ATAT--CCAATTTGCTG----TCTGTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178458059 107 + 185818997 ATGAAATACT------------------AAAT--TTTATAAATATATAACTTCAATAAAA--GATGTGAAAATACA-----ACTAAGTCATTATGACAATTTGTATGAAACA-ACAT--CCAATTTGCTG----TCTGTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947790 107 + 192294377 ATGAAATACT------------------AAAT--TTTATAAATATATAACTTCAATAAAA--GATGTGAAAATACA-----ACTAAGTCATTATGACAATTTGTATGAAACA-ACAT--CCAATTTGCTG----TCTGTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916401 107 + 15219753 ATGAAACACT------------------AAAT--TTTATAAATATATAACTTCAATAAAA--GATGTGAAAATACA-----ACTAAGTCATTATGACAATTTGTATGAAACA-ACAT--CCAATTTGCTG----TCTGTTA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9560564 107 + 11639508 ATGAAATACT------------------AAAT--TTTATAAATATATAACTTCAATAAAA--GATGTGAAAATACA-----ACTAGGTCATTATGACAATTTGTATGAAACA-ACAT--CCAATTTGCTG----TCTGTTA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120412120 106 + 127223203 ATGAAATACT------------------AAAT--TTTATAAATATATAACTTCAATAAAA--GATGTGAAAATACA-----ACTAGGTCATTATGACAATTTGTATGAAACA-ACAT--CCAATTTGCT-----TCTGTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538417 107 - 2854183 ATGAAATACT------------------AAAT--TTTATAAATATATAACTTCAATAAAA--GATGTGAAAATACA-----ACTAGGTCATTATGACAATTTGTATGAAACA-ACAT--CCAATTTGCTG----TCTGTTA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20244985 107 + 27496150 ATGAAATACT------------------AAAT--TTTATAAATATATAACTTCAGTAAAA--GATGTGAAAATACA-----ACTAGGTCATTATGACAACTTGTATGAAACA-ACAT--CCAATTTGCTG----TCTGTTA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33698869 88 - 128169293 ATGAAATACT------------------GAATGACTTATAAATACATAACTTCAATAAAA--GATGAGAAAATACA-----ACTAGGTCATTAGGA------------------------CAATTTGATG----TCTGTTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17034805 109 + 19594188 ATGAAATACT------------------GAATTATTTATGAATATATAACTTCAATAAAA--TATGAGAAAATACA-----ACTAGGTCATTAGGACAATTTGTATGGAACA-ACAT--CCAATTTGATG----TCTGTTA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4922053 109 - 11686629 ATGAAACACT------------------GAATTATTTATAAATACATAGCTTCAATAAAA--GATGAGAAAATACA-----TCTAGGACATTAGGACAATTTGTACGGAATA-ACAT--CCAATTTGATG----TCTGTTA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3272761 109 - 4527795 ATGAAATACT------------------GAATTATTTATAAATACATAACTTCAATAAAA--GACGAAAAAATACA-----ACTAGGTCATTAGGACAATTTATATGGAACA-ACAT--CCAATTTGATG----TCTGTTA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5488724 119 - 12253515 gtgagactctgtctcttaaaaaaaaaaaaaaGCATTTATAAATTCATAACTTCAATAAAA--GATCAGAAAATATA-----ACTGGTTCATTGGGATAATTTGTATGAAACA-ATCCTGCCAAT--------------TTC i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16058323 118 + 59632846 ATGAAACACT------------------AAAATATATATAAATGCATAACTTCAATAAAG--GGGTGAAAAAAAGAAAAGCACTGGTTGAGTGGGATAATTTATATGAAACC-ATGT--CCAGCTGGCTGGCAACCTGTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1229184 109 + 1922530 ATGAAATTCt------------------aaaa--tataaagaaatataatttaaataaaaatgat-agaaaaaatt-----attGGTTCATTAGGATAGTTTGTATGAAACACATGT--CCAATTTTCTG----GCTTCTA i dasNov3.JH575209 I 1 I 2 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=852449.000000 s hg38.chrUn_KI270746v1 57151 93 + 66486 ----------------CTTCT---ACC--TTATCATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTGCATCTACAATAGGCAAAAAAACAAA--------------------AAACAAAAGGAATCT----------------------------------------------TATTCT s panTro5.chr7 156354724 96 + 166211670 ----------------CTTCTCCTACC--TTATCATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTGCATCTACAATAGGCAAGAAAACAAA--------------------AAACAAAAGGAATCT----------------------------------------------TATTCT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967809 96 + 162613886 ----------------CTTCTCCTACC--TTATCATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTGCATCTACAATAGGCAAGAAAACAAA--------------------AAACAAAAGGAATCT----------------------------------------------TATTCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 6927 96 + 12255 ----------------CTTCTCCTACC--TTATCGTGTCTA-ATTTTTTCTC---ATCTTTGTGAATTCCTGCATCTACAGTAGGCAAAAAAACAAA--------------------AATCAAAAGGAATCT----------------------------------------------TATTCT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102841517 92 + 110113093 ----------------CTTCT---ACC--TTATCATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTGCGTCTACAATAGGCAAGAAAA-AAA--------------------AAACAAAAGGAATCT----------------------------------------------TATTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178458166 96 + 185818997 ----------------CTTCTCCTACC--TTATCATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTGCGTCTACAGTAGGCAAGAAAACAAA--------------------AAACAAAAGGAATCT----------------------------------------------TACTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947897 96 + 192294377 ----------------CTTCTCCTACC--TTATCATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTGCGTCTACAGTAGGCAAGAAAACAAA--------------------AAACAAAAGGAATCT----------------------------------------------TACTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916508 96 + 15219753 ----------------CTTCTCCTACC--TTATCATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTGCGTCTACAGTAGGCAAGAAAACAAA--------------------AAACAAAAGGAATCT----------------------------------------------TACTCT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9560671 96 + 11639508 ----------------CTTCTCCTACC--TTATCATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTGCGTCTACAGTAGGCAAGAAAACAAA--------------------AAACAAAAGGAATCT----------------------------------------------TACTCT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120412226 96 + 127223203 ----------------CTTCTCCTACC--TTATCATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTGCGTCTACAGTAGGCAAGAAAACAAA--------------------AAACAAAAGGAATCT----------------------------------------------TACTCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538524 96 - 2854183 ----------------CTTCTCCTACC--TTATCATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTGCGTCTACAGTAGGCAAGAAAACAAA--------------------AAACAAAAGGAATCT----------------------------------------------TACTCT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20245092 96 + 27496150 ----------------CTTCTCCTACC--TTATCATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTGCGTTTACAGTAGGCAAGAAAACAAA--------------------AAACAAAAGGAATCT----------------------------------------------TCCTCT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33698957 96 - 128169293 ----------------CTTCTCCTGCT--ACCTTATGTCTA-ACTATTCCTC---ATCTTTGTGAAATCCTACGTCTACAATAGGCAAGAAAACTAA--------------------TTTTAAAAAGAATTG----------------------------------------------TATTCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17034914 79 + 19594188 ----------------CTTCTCCTACT--ATCTTATGTCTA-ATTTTTCCTC---ATCTTTGTG-----------------TAGGCAAGAAAACAAA--------------------TTTTAAAAAGAACTG----------------------------------------------TATTCT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4922162 95 - 11686629 ----------------CTTCTCCTACT--ACC-TATGTCTA-ATTTTTCCTC---ATCTTTGTGAAATCCTATGTCTGCAATAGGCAAGAAAACAAA--------------------TTTTAAAAAGAATTG----------------------------------------------TATTCT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3272870 73 - 4527795 ----------------CTTCTCCTACT--ACCTTATGTCTA-ATTTTTCCTC---ATCTTTGTGAAAT-----------------------AACAAA--------------------TTTTAAAAAGAATTG----------------------------------------------TATTCT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5488843 167 - 12253515 ----------------CTTCTCCTAGTGGGCACCACATTTA-ATTTTTTCTCCTTATCTTTGTGAAATACTGTATCTAAATTGGGCAAAAAggccaggggaggtagctcactcctgtaaatcccaggaatctggaggctgagatgggaggatcacttgagctcaggagtatgagataccattct i otoGar3.GL873572 C 0 I 236 s canFam3.chr16 16058441 109 + 59632846 CTGCTCCACCAATTTCCTTTTCCTACTATCTATCACACCTATATTCTTCCTC-TTATCTTTGTGAAATCTTGTGTCTGAAATGAGGAAGAAA-------------------------AAACAAAAGA---CT----------------------------------------------TTTTCT i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1229293 2 + 1922530 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=2990904.000000 s hg38.chrUn_KI270746v1 57244 276 + 66486 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTTAGGTTCTAAATCATACATTTGAGATATATCTCAAACATGTCATAAAGAAAATAAGCATCATATTTCTAACTAAATAGCACCT-GAAATATTCCATATGAAAGGAAAAATACAAAAAAC----TAAACTTTTAATTACTAA--CCTCCTTAAAGG-AAAATAATTCTATATGATT----------------TGATATTTCATAA--------------TGGATGTCCA---ATACCTGAG-------ATATAAATTCCATTTTCTGTGTCTTAA-CATCTC- s panTro5.chr7 156354820 275 + 166211670 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTTAGGTTCTAAATCATACATTTGAGATATATTTGAAACATGTCATAAAGAAAATAAGCATCATATTTCTCACTAAATAGCACCT-GAAATATTCCATATGAAAGGAAAAATACAAAAAAC----TAAACTTT-AATTACTAA--CCTCCTTAAAGG-AAAATAATTCTATATGATT----------------TGATATTTGATAA--------------TGGATGTCCA---ATACCTGAG-------ATATAAATTCCATTTTCTGTGTCCTAA-CATCTC- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155967905 275 + 162613886 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTTAGGTTCTAAATCATACATTTGAGATATATTTGAAACATGTCATAAAGAAAATAAGCATCATATTTCTCACTAAATAGCACCT-GAAATATTCCATATGAAAGGAAAAATACAAAAAAC----TAAACTTT-AATTACTAA--CCTCCTTAAAGG-AAAATAATTCTATATGATT----------------TGATATTTGATAA--------------TGGATGTCCA---ATACCTGAG-------ATATAAATTCCATTTTCTGTGTCCTAA-CATCTC- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 7023 276 + 12255 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTTAGGTTCTAAATCATACATTTGAGATATATTTGAAACACGTCATAAAGAAAATAAGCATCATATTTCTCACTAAATAGCACCT-GAAATATTCCATATGAAAGGAAAAATACAAAAAAC----TAAACTTTTAATTACTAA--CCTCCTTAAAGA-AAAAGAATTCTATGCGATT----------------AGATATTTGATAA--------------TGGATGTCCA---ATACCTGAG-------ATTTAAATCCCATTTTCTGTGTCCTAA-CATCTC- i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102841609 275 + 110113093 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTTAGGTTCTAAATCATACATTTGAGATATATTTGAAACATGTCATAAAGAAAATAAGCATTATATTTCTCACTAAACAGCACCT-GAAATATTCCATATGGAAGGAAAAATACAAAAACT----TAAACTTT-AATTACTAA--TCTCCTTAAAGG-AAAATAATTCTATATGATT----------------TGATATTTGATAA--------------TGGATGTCCA---ATACCTGAG-------ATATAAATTCCATTTTCTGTGTCCTAA-CATCTC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178458262 275 + 185818997 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTCAGGTTCTAAACCACACATTTGAGATATATTTGAAACATGTCATAAAGAAAATAAGCATTATATTTCTCACTAAATAGCACCT-AAAACATTCCATATGAAAGGAAAAATACAAAAAAC----TAAACTTT-AATTACTAA--CCTCCTTAAAGG-AAAATAATTCTATATGATT----------------TGATGTTTGATAA--------------TGGATGTCCA---ATACCTGAG-------ACATAAATTCCATTTTCTGGGTCCTAA-CATCTC- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184947993 275 + 192294377 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTTAGGTTCTAAACCACACATTTGAGATATATTTGAAACATGTCATAAAGAAAATAAGCATTATATTTCTCACTAAATAGCACCT-AAAACATTCCATATGAAAGGAAAAATACAAAAAAC----TAAACTTT-AATTACTAA--CCTCCTTAAAGG-AAAATAATTCTATATGATT----------------TGATGTTTGATAA--------------TGGATGTCCA---ATACCTGAG-------ACATAAATTCCATTTTCTGGGTCCTAA-CATCTC- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916604 275 + 15219753 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTTAGGTTCTAAACCACACATTTGAGATATATTTGAAACATGTCATAAAGAAAATAAGCATTATATTTCTCACTAAATAGCACCT-AAAACATTCCATATGAAAGGAAAAATACAAAAAAC----TAAACTTT-AATTACTAA--CCTCCTTAAAGG-AAAATAATTCTATATGATT----------------TGATGTTTGATAA--------------TGGATGTCCA---ATACCTGAG-------ACATAAATTCCATTTTGTGGGTCCTAA-CATCTC- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9560767 274 + 11639508 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTTAGGTTCTAAATCACACATTTGAGATATATTTGAAACATGTCATAAAGAAAATAAGCATTATATTTCTCACTAAATAGCACCT-AAAACATTCCATATGAAAGGAAAAATACAAAAAAC----TAAACTTT-AATTACTAA--CCACCTTAAAGG-AAAATAATTCTATATGATT----------------TGATGTTTGATAA--------------TGGATGTCCA---ATACCTGAG-------ACATAAATTCCA-TTTCTGGATCCTAA-CATCTC- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120412322 275 + 127223203 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTTAGGTTCTAAATCACACATTTGAGATATATTTGAAACATGTCATAAAGAAAATAAGCATTATATTTCTCACTAAATAGCACCT-AAAACATTCCATATGAAAGGAAAAATACAAAAAAC----TAAACTTT-AATTACTAA--CCTCCTTAAAGG-AAAATAATTCTATATGATT----------------TGATGTTTGATAA--------------TGGATGTCCA---ATACCTGAG-------ACATAAATTCCATTTTCTGGGTCCTAA-CATCTC- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538620 275 - 2854183 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTTAGGTTCTAAATCACACATTTGAGATATATTTGAAACATGTCATAAAGAAAATAAGCATTATATTTCTCACTAAATAGCACCT-AAAACATTCCATATGAAAGGAAAAATACAAAAAAC----TAAACTTT-AATTACTAA--CCTCCTTAAAGG-AAAATAATTCTATATGATT----------------TGATGTTTGATAA--------------TGGATGTCCA---ATACCTGAG-------ACATAAATTCCATTTTCTGGGTCCTAA-CATCTC- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20245188 274 + 27496150 ATTCACAGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTTAGGTTCTAAATCACACAATTGAGATATATTTGAAACATGTCATAAAGAAAATAAACATTATATTTCTCACTAAATAGCACCT-AAAACATTCCACATGAAAGGAAAAATACAAAAAAC----TAAACTTT-AATTACTAA--CCTCCTTAAAGG--AAATAATTCTATATGATT----------------TGATATTTGATAA--------------TGGATGTCCA---ATACCTGAG-------ATATAAATTCCATTTTCTGGGTCCTAA-CATCTC- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33699053 265 - 128169293 GTTCACAGCCATCAGAGCAA--TCTGTTACTATTTCTGT-----AGTAAGGTTCTAAATCATACATTTGAGATATATTTTAAACATCTCATAAAGAAAAT-AGCATTATATTTCTCACTAAATAGCACCT-AAAATATTACAAATGAAA-GAAGAATAC-AAAAACTTAGTAAACTCT-AATTACTAA--CCTCCTTAAAGA-AAAATAATTCTATATGGAT----------------TGAT--------A--------------AGGATGTCCA---ACACCTGAG-------ATATAAATTCCATTTTCTGTGTCCTAACCATCTC- i calJac3.chr8 C 0 I 3 s saiBol1.JH378140 17034993 262 + 19594188 GTTCACGGCCATCAGAAAAA--TGTGTTACTATTCCTGT-AGTCAGTAAGGTTATAAATCATACATCTGAGATATATTTTAAACA-CTCATAAAGAAAAT-AGCATTGTATTTCTCACTAAATGGCACCT-AAAATATTCCATATGAAA-----------AAAAAC----TAAACTCT-AATTACTAA--CCTCCTTAAAGA-AAAATAATTCTATATGGAT----------------TGATATTTGATAA--------------AGGATGTCCA---ATACCTAAG-------ATATAAATTCCATTTTCTGTGTTCTAA-CATCTC- i saiBol1.JH378140 C 0 I 3 s cebCap1.NW_016107335v1 4922257 273 - 11686629 GTTCACAGCCATCAGAGAAA--TGTGTTAATATTCCTGT-AGTCAGTAAGGTTATAAATCATACATTTGAGATATATTTTAAACATCTCATAAAGAAAAT-AGCATTATATTTCTCACTAAATAGCGCCT-AAAATATTCCATATGAAA-GAAGAATATAAAAAAC----TAAACTCT-AATTACTAA--CCTTCTTAAAGA-AAAATAATTCTATATGGAT----------------TGATATTTGATAA--------------AGGATGTCCA---ATACCTGAG-------ATATAAATTCCATTTTCTGTGTCCTAA-CATCTC- i cebCap1.NW_016107335v1 C 0 I 185 s aotNan1.NW_018506100v1 3272943 273 - 4527795 GTTCACAGCCATCAGAGGAA--TGTGTTACTATTCCTGT-AGTCAGTATGGTTCTAAATCATACATTTGAGATATATTTTAAACATCTCATAAAGAAAAT-AGCATTATATTTCTCACTAAATAGCACCT-AAAATATTCCATATGAAA-GAAGAATACAAAAAAC----TAAACTCT-AATTACTAA--CCTCCTTAAAGA-AAAATAATTCTATACGGAT----------------TGATATTTGATAA--------------AGGATGTCCA---ATACCTGAG-------ATATAAATTCCATTTTCTATGTCCTAA-CATCTC- i aotNan1.NW_018506100v1 C 0 I 3 s otoGar3.GL873572 5489246 274 - 12253515 ATTCACACCCATCATGAAAA--CGTGTCATTGTTCTTGTAAGTCAGTATGGTCCTAAAGCATACATTTGAGATACATTTGAAACACCTCATGAAGAAAATGAAC---TTATGTCTCACTAAACAGTATCT-AAAATTTTCCATATAAAAGGCACAATACAAACCAC----TAAACTTT-AAGTACTAA--CCTCTGTAAAGGAAAAATAACTCTATTTTGTT----------------TGTCATTTGATAA--------------CGGACTTTTA---ATACCCAAA-------ATAGAAGTCCCATTTTCTGCATCCTGA-TGCCTC- i otoGar3.GL873572 I 236 C 0 s canFam3.chr16 16058550 303 + 59632846 ATGCATAACCATCAGAAAAACTTACATTACTGTTCCTAG-----AGTAAGGTCTTGAAGCATATATCAGAGATATGCTTGAAACATTTCATGAAGAATATAATA--------------TAAATAGCACCTAAAAATCTTCCAAATAAAAGGCACAATATAAAACAC----TAAACTTC-AATGATTAAGTTCTTCTAAAGGG-AAAATAATCCTGTATAGATTCCATGTTCTGTGTCCTGATGTTTCAGAATCAGAATAGTGATCTATATACCCATCCATACTCCAGTATCACTACACACATTTTTATATATGTACACATA-TATGTTC i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1229293 2 + 1922530 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I a score=387403.000000 s hg38.chrUn_KI270746v1 57520 73 + 66486 ACCTTCAG-------AAAATCTCCAATATTGGGT-----------TATTTGGATTATATATTTAAAACTGAATATAC-TTGAAGATGT---GAAT s panTro5.chr7 156355095 73 + 166211670 ACCTTCAG-------AAAATCTCCAATATTGGGT-----------TATTTGGATTATATATTTAAAACTGAATATAC-TTGAAAATGT---GAAA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155968180 73 + 162613886 ACCTTCAG-------AAAATCTCCAATATTGGGT-----------TATTTGGATTATATATTTAAAACTGAATATAC-TTGAAAATGT---GAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 7299 73 + 12255 ACCTTCAG-------AAAATCTCCAATATTGGGT-----------TATTTGGATTATATATTTAAAACTGAATATAC-TTGAAGATGT---GAAT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102841884 73 + 110113093 GCCTTCAG-------AAAATCTCCAATATTGGGA-----------TATTTGGATTATCTATTTCAAACTGAATATAC-TTGAAAATGT---GAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178458537 76 + 185818997 AACTTCAG-------AAAATCCTCTATATTGGGT-----------TACTTGGATTATATATTCAAAACTTAATATAT-TTGAAAATGTGCAGAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184948268 76 + 192294377 AACTTCAG-------AAAATCCTCTATATTGGGT-----------TACTTGGATTATGTATTCAAAACTTAATATAT-TTGAAAATGTGCAGAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916879 76 + 15219753 AACTTCAG-------AAAATCCTCTATATTGGGT-----------TACTTGGATTATATATTCAAAACTTAATATAT-TTGAAAATGTGCAGAAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9561041 76 + 11639508 AACTTCAG-------AAAATCCTCTATATTGGGT-----------TACTTGGATTATATATTCAAAACTTAATATAT-TTGAAAATGTGCAGAAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120412597 76 + 127223203 AACTTCAG-------AAAATCCCCTATATTGGGT-----------TACTTGGATTATATATTTAAAACTTAATATAT-TTGAAAATGTGCAGAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538895 76 - 2854183 AACTTCAG-------AAAATCCTCTATATTGGGT-----------TACTTGGATTATATATCCAAAACTTAATATAT-TTGAAAATGTGCAGAAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20245462 76 + 27496150 AACTTCAG-------AAAATCCCCTATATTGGGT-----------TATTTGGATTATATATTTAAAACTTAATATAT-TTGAAAATGTGCAGAAT i colAng1.NW_012115154v1 C 0 C 0 s otoGar3.GL873572 5489520 65 - 12253515 ACATTCAG-------AAAACTCCCC--------C-----------TACATGGATTGTATGTTGAAAACTGTACA----TTGCAAATGTACAGACT i otoGar3.GL873572 C 0 I 182 s canFam3.chr16 16058853 93 + 59632846 ATATTCATTTATTACATATTTTTGTATACTGTATACAGTATACTGTATATTTTTTGTATACTGAAAATCTAACGGACACTGAAAATACACAGT-- i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1229293 2 + 1922530 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e aotNan1.NW_018506100v1 3273216 3 - 4527795 I e cebCap1.NW_016107335v1 4922530 185 - 11686629 I e saiBol1.JH378140 17035255 3 + 19594188 I e calJac3.chr8 33699318 3 - 128169293 I a score=501534.000000 s hg38.chrUn_KI270746v1 57593 81 + 66486 GATTT----GTTGCTGC------------------------------------------------------------------AACAAATG----------------------GTTTAGCAATTATCTGCATTAAAATGTGTTCCATGAACAACAGAAAA----AGAA-TATTTCTAC s panTro5.chr7 156355168 81 + 166211670 GATTT----GTTGCAGC------------------------------------------------------------------AACAAATG----------------------GTTTAGCAATTATCTGCATTAAAATGTGTTCCATGAACAACAGAAAA----AGAA-TATTTCTAC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155968253 81 + 162613886 GATTT----GTTGCAGC------------------------------------------------------------------AACAAATG----------------------GTTTAGCAATTATCTGCATTAAAATGTGTTCCATGAACAACAGAAAA----AGAA-TATTTCTAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 7372 81 + 12255 GATTT----GTTGCTGC------------------------------------------------------------------AACAAATG----------------------GTTTAGCAATTATCTGCATTAAAATGTGTTCCATGAAGAACAGAAAA----AGAA-TATTTCTAC i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102841957 81 + 110113093 GATTT----GTTGCTGC------------------------------------------------------------------AACAAATG----------------------GTTTAGCAATTATCTGCATTAAAATGTGTTCCATGAACAACAGAAAA----AGAA-TATTTCTAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178458613 81 + 185818997 GATTT----GTTGCTGC------------------------------------------------------------------AACAAATG----------------------GTTTAGCAATTATCTACATTAAAACGTGTTCCATGAACAACAGAAAA----AGAG-TATTTCTAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184948344 81 + 192294377 GATTT----GTTGCTGC------------------------------------------------------------------AACAAATG----------------------GTTTAGCAATTATCTACATTAAAACGTGTTCCATGAACAACAGAAAA----AGAG-TATTTCTAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7916955 81 + 15219753 GATTT----GTTGCTGC------------------------------------------------------------------AACAAATG----------------------GTTTAGCAATTATCTACATTAAAACGTGTTCCATGAACAACAGAAAA----AGAG-TATTTCTAC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9561117 79 + 11639508 GATTT----GTTGCTGC------------------------------------------------------------------AACAAATG----------------------GTTTAGCAATTACCTACATTAAAACGTGTTCCATGAACAACAGAAAA------AG-TATTTCTAC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120412673 81 + 127223203 GATTT----GTTGCTGC------------------------------------------------------------------AACAAATG----------------------GTTTAGCAATTATCTACATTAAAACGTGTTCCATGAACAACAGAAAA----AGAG-TATTTCTAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1538971 81 - 2854183 GATTT----GTTGCTGC------------------------------------------------------------------AACAAATG----------------------GTTTAGCAATTATCTACATTAAAACGTGTTCCATGAACAACAGAAAA----AGAG-TATTTCTAC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20245538 82 + 27496150 GATTT----GTTGCTGC------------------------------------------------------------------AACAAATG----------------------GTTTAGGAATTACCTACATTAAAACATGTTCCATGAACAACAGAAAA----AGAGTTATTTCTAC i colAng1.NW_012115154v1 C 0 C 0 s otoGar3.GL873572 5489767 176 - 12253515 gagtttgaggttgctgtgagctgggacgccatagcactctaccaagggtgacacagtgagactctgtctaaaaaaaaaaaaaaaaaaaaTGTACCGAATGAATTTGTTCCTATGTTTAGAAGTTCTCTGTTTTGACATGTGTCCTATGAGCAACAGAGAAA-GCAGAA-TATTTCCAC i otoGar3.GL873572 I 182 I 1 s canFam3.chr16 16058946 83 + 59632846 GAATT----GTTGCTAC------------------------------------------------------------------AACAAATG----------------------GTTT--TTATCATTCACTTTAAAACATGACCTATGAGCAATTGGAGGATGTAGAC-TATTTCTAC i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1229293 2 + 1922530 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e aotNan1.NW_018506100v1 3273216 3 - 4527795 I e cebCap1.NW_016107335v1 4922530 185 - 11686629 I e saiBol1.JH378140 17035255 3 + 19594188 I e calJac3.chr8 33699318 3 - 128169293 I a score=313421.000000 s hg38.chrUn_KI270746v1 57674 31 + 66486 TTCAGTCCTTAAAAATTGTGAAAGCA--CAGCC s panTro5.chr7 156355249 31 + 166211670 TTCAGTCCTTAAAAATTGTGAAAGCA--CAGCC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155968334 31 + 162613886 TTCAGTCCTTAAAAATTGTGAAAGCA--CAGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 7453 31 + 12255 TTCAGTCCTTAAAAATTGTGAAAGCA--CAGCC i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102842038 31 + 110113093 TTCAGTCCTTAAAAATTGTGAAAGCA--CAGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178458694 31 + 185818997 TTCAGTCCTTAAAGACTGTGAAAGCA--CAGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184948425 31 + 192294377 TTCAGTCCTTAAAGACTGTGAAAGCA--CAGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7917036 31 + 15219753 TTCAGTCCTTAAAGACTGTGAAAGCA--CAGCA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9561196 31 + 11639508 TTCAGTCCTTAAAGACTGTGGAAGCA--CAGCA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120412754 31 + 127223203 TTCAGTCCTTAAAGACTGTGAAAGCA--CAGCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1539052 31 - 2854183 TTCAGTCCTTAAAGACTGTGAAAGCA--CAGCA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20245620 31 + 27496150 TTCAGTCCTTAAAGACTGTGAAAGCA--CAGCA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33699321 31 - 128169293 TTCAGTCCTTAAAAACAGTGAAAGCA--CAGCC i calJac3.chr8 I 3 I 10 s saiBol1.JH378140 17035258 31 + 19594188 TTCAGTCCTTAAAAATAGTGAAAGCA--CAGCC i saiBol1.JH378140 I 3 I 10 s aotNan1.NW_018506100v1 3273219 31 - 4527795 TTCAGTCCTTAAAAATAGTGAAAGCA--CAGCC i aotNan1.NW_018506100v1 I 3 I 20 s otoGar3.GL873572 5489944 30 - 12253515 TCAAGTCCTTAAAAACAGTGAAAGCGATCA--- i otoGar3.GL873572 I 1 C 0 s canFam3.chr16 16059029 31 + 59632846 TTCAATACTTAAAAGTGGTGAAAGTA--TAGCA i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1229293 2 + 1922530 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e cebCap1.NW_016107335v1 4922530 185 - 11686629 I a score=4222347.000000 s hg38.chrUn_KI270746v1 57705 663 + 66486 ACAGTCTTAGTTTGTCGATCTTGAATTCTTCTGGTATTTTAATTTCA--CCAATAATTCTGGAACTGCTGTTTTTGTATTTCTCAaaatgttttgtcttgcatcgtgcaataaggcagccaccatcatatgtgaccaccgagcacttctaatgcag-ctagccagaactg--atgt--t------ttaa----------gtataaagcatcttgt---tcacttttatac------taaatgctgaaatattgttttgaatataccaggttaaataaaatatattaaaatttatttcaccttttttttt------aagtgtaactactagaaaatttaaaattacacatat--ggtctgcatcatatt-tctattagacagcactg-GCTCACCGTTCTACTGGTTGGCTAGCTTGTACCTCCAGATAACATCTGATAATCCAATCACTAGCTATCA---CAAA--CTAGATCTTTCAGA-----TGTTTCCTATTAAAATGTTTGTTTAATTTTGAAGTGAATTCCTAGAAAAGCTCATATAATACTATTATAGAAAATCATTAAAATCAAC------TTAATAATT------TGCCCACCATGAAACAGAACTTAAGGTAAATCTACATTTCTTTGGT----TAGTATTTACTGTACTGGTAAAGACCAAAGAATTGGTAATGTTCAACAAAATATGAAAATGCCAGTGACTTTAACA----AAAAAATAGCT s panTro5.chr7 156355280 668 + 166211670 ACAGTCTTAGTTTGTCGATCTTGAATTCTTTTGGTATTTTAATTTCA--CCAATAATTCTGGAACTGCTGTTTTTATATTTCTCAaaatgttttgtcttgcatcgtccaataaggcagccaccatcatatgtaaccactgagcacttctaatgcag-ctagccagaactg--atgt--t------ttaa----------gtataaagcatcttgt---tcatttttatac------taaatgctgaaatattgttttgaatataccaggttaaataaaatagattaacatttatttcacctgtttttgttttttaaagtgtaactacttgaaaatttaaaattacacatat--ggtctgcattatatt-tatattagacagcactg-GCTTACCGTTCTACTAGTTGGCTAGCTTGTACCTCCAGATAACATCTGATAATCCAATCACTAGCTATCA---CAAA--CTAGATCTTTCAGA-----TGTTTCCTATTAAAATGTTCATTTAATTTTGAAGTGAATTCCTAGAAAAGCTCATATAATACTATTATAGAAAATCATTAAAATCAAC------TGAATAATT------TGCCCACCATGAAACAGAACTTAAGGTAAATATACATTTCTTTGGT----TAGTATTTACTGTACTGGTAAAGACCAAAGAATTGGTAATGTTCAACAAAATATGAAAATGCCAGTGACGTTAACA----AAAAA-TAGCT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155968365 668 + 162613886 ACAGTCTTAGTTTGTCGATCTTGAATTCTTTTGGTATTTTAATTTCA--CCAATAATTCTGGAACTGCTGTTTTTATATTTCTCAaaatgttttgtcttgcatcgtccaataaggcagccaccatcatatgtgaccactgagcacttctaatgcag-ctagccagaactg--atgt--t------ttaa----------gtataaagcatcttgt---tcatttttatac------taaatgctgaaatattgttttgaatataccaggttaaataaaatagattaacatttatttcacctgtttttgttttttaaagtgtaactacttgaaaatttaaaattacacatat--ggtctgcattatatt-tatattagacagcactg-GCTTACCGTTCTACTAGTTGGCTAGCTTGTACCTCCAGATAACATCTGATAATCCAATCACTAGCTATCA---CAAA--CTAGATCTTTCAGA-----TGTTTCCTATTAAAATGTTCATTTAATTTTGAAGTGAATTCCTAGAAAAGCTCATATAATACTATTATAGAAAATCATTAAAATCAAC------TGAATAATT------TGCCCACCATGAAACAGAACTTAAGGTAAATATACATTTCTTTGGT----TAGTATTTACTGTACTGGTAAAGACCAAAGAATTGGTAATGTTCAACAAAATATGAAAATGCCAGTGACGTTAACA----AAAAA-TAGCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 7484 665 + 12255 ACAGTCTTAGTTTGTCAATCTTGAATTCTTTTGGTATTTTAATTTCA--CCAATAGTTCTGGAACTGCTCTTTTTGTATTTCTCAAAATGTTTTGTCTtgcatcgtgcaataaggcagccaccatcatatgtgaccactgagcacttctaatgcag-ctagccagaactg--atgt--t------ttaa----------gtataaagcatcttgt---tcatttttatac------taaatcctgaaatattgttttgaatataccaggttaaataaaatagattaaaatttatttcacctgtttttttttt---aagtgtaactactggaaaatttaaaattacacatat--ggtctgcatcatatt-tctattagacagcactg-GCTCACCGTTCTACTGGTTGGCTAGCTTGTACCTCCAGATAACATCTGATAATCCAATCACTAGCTATCA---CAAA--ATAGATCTTTCAGA-----TGTTTCCTATTAAAATGTTCGTTTAATTTTGAAATGAATTCCTAGAAAAGCTCATATAATACTATTATAGAAAATCATTAAAATCAAC------TTAATAATT------TGCCCAACATGAAACAGAACTTAAGGTAAATCTACATTTGTTTGGT----TAGTATTTATTGTACTGGTAAAGACCAAAGAATTGGTAATGTTCAACAAAATATGAAAATGCCAGTGACGTTAACA----AAAAA-TAGCT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102842069 663 + 110113093 ACAGTCTTAGTTTGTCGATCTTGAATTCTTTTGGTATTTTAATTTCA--CCAATAATTCTGGAACTGCTGTTTTTGTATTTCTCAaaatgttctgtcttgcatcgtccaataaggcagccaccatcatatgtgaccactgagcacttctaatgtag-ctagccagaattg--atgt--t------ttaa----------gtataaagcatcttgt---tcatttttatac------taaatgctgaaatattgttttgaatataccaggttaaataaaatagattaaaatttatatcacctttttttttt-----aagtgtaactactagaaaatttaaaattacacatat--ggtctgcattatatt-tatattagacagcactg-GCTTACCATTCTACTGGTTGGCTAGCTTGTACCTCCAGATAACATCTGATAATCCAATCACTAGCTATCA---CAAA--CTAGATCTTTCAGA-----TGTTTCCTATTAAAATATTCATTTAATTTTGAAGTGAATTCCTAGAAGAGCTCATATAATACTATTATAGAAAATGATTAAAATCAAC------TTAATAATT------TGCCCACCATGAAACAGAACTTAAGGTAAATCTACATTTCTTTGGT----TACTATTTACTGTACTGGTAAAGACCAAAGAATTGGTAATGTTCAACAAAATATGAAAATGCCAGTGACGTTAACA----AAAAA-TAGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178458725 665 + 185818997 ACAGTCTTAGTTTGTCGATCTTGAATTCTTTTGGTATTTTAATTTCA--CCAGTAATTCTGGAACTGCTTTTTTCATATTTCTCAAAATGTTTTGTATtgcattgtccaataaggcagccaccatcatatgtgaccactgagcacttctaacgtag-ctagtcacaattgatatgt--t------ttaa----------gtataaagcatcttgt---tcatttttatactga--ttaaatgctgaaatattgttttgaatataccaggttaaataaaatagattaaaatttatttcacctgtttttgtttttttaagtgtaactactagaaaatgtaaaattacacacat--ggtctgcattatatt-tatattagatagcactg-GCTTACCATTCTACTGGTTGGTTAGCTTGTACCTCCAGATAACATCTGATAATCCAATTACTAGCTATCA---CAAA--CTAGATCTTTCAGA-----TGTTTCCTATTAAAATGTTCATTTAATTTTGAAGTGAATTCCTCGAAAAGCTCATATAATACTATTACAG---------AAAATCAAC------TTAACAATT------TGCCCACCATGGAACATAATTTAAGGTAAATCTACATTTCTCTGGT----TAGTATTTACCGTACTGGTAAAGACCAAAGAATTGGTAAGGTTCAACAAAATATGAAAATGCCAGTGATGTTAACA----AAAAA-TAGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184948456 665 + 192294377 ACAGTCTTAGTTTGTCGATCTTGAATTCTTTTGGTATTTTAATTTCA--CCAGTAATTCTGGAACTGCTTTTTTCATATTTCTCAAAATGTTTTGTATtgcattgtccaataaggcagccaccatcatatgtgaccactgagcacttctaacgtag-ctagtcagaattgatatgt--t------ttaa----------gtataaagcatcttgt---tcatttttatactga--ttaaatgctgaaatattgttttgaatataccaggttaaataaaatagattaaaatttatttcacctgtttttgtttttttaagtgtaactactagaaaatgtaaaattacacacat--ggtctgcattatatt-tatattagatagcactg-GCTTACCATTCTACTGGTTGGTTAGCTTGTACCTCCAGATAACATCTGATAATCCAATTACTAGCTATCA---CAAA--CTAGATCTTTCAGA-----TGTTTCCTATTAAAATGTTCATTTAATTTTGAAGTGAATTCCTCGAAAAGCTCATATAATACTATTACAG---------AAAATCAAC------TTAACAATT------TGCCCACCATGGAACATAACTTAAGGTAAATCTACATTTCTCTGGT----TAGTATTTACCGTACTGGTAAAGACCAAAGAATTGGTAAGGTTCAACAAAATATGAAAATGCCAGTGATGTTAACA----AAAAA-TAGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7917067 665 + 15219753 ACAGTCTTAGTTTGTCGATCTTGAATTATTTTGGTATTTTAATTTCA--CCAGTAATTCTGGAACTGCTTTTTTCATATTTCTCAAAATGTTTTGTATtgcattgtccaataaggcagccaccatcatatgtgaccactgagcacttctaacgtag-ctagtcagtattgatatgt--t------ttaa----------gtataaagcatcttgt---tcatttttatactga--ttaaatgctgaaatattgttttgaatataccaggttaaataaaatagattaaaatttatttcacctgtttttttttttttaagtgtaactactagaaaatgtaaaattacacacat--ggtctgcattatatt-tacattagatagcactg-GCTTACCATTCTACTGGTTGGTTAGCTTGTACCTCCAGATAACATCTGATAATCCAATTACTAGCTATCA---CAAA--CTAGATCTTTCAGA-----TGTTTCCTATTAAAATGTTCATTTAATTTTGAAGTGAATTCCTTGAAAAGCTCATATAATACTATTACAG---------AAAATCAAC------TTAACAATT------TGCCCACCATGGAACATAACTTAAGGTAAATCTACATTTCTCTGGT----TAGTATTTACCGTACTGGTAAAGACCAAAGAATTGGTAAGGTTCAACAAAATATGAAAATGCCAGTGATGTTAACA----AAAAA-TAGCT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9561227 665 + 11639508 ACAGTCTTAGTTTGTCGATCTTGAATTCTTCTGGTATTTTAATTTCA--CCAGTAATTCTGGAACTGCTTTTTTCATATTTCTCAAAATGTTTTGTATtgcattgtccaataaggcagtcaccatcatatgtgaccaatgagcacttctaacgtag-ctagtcagaattgatatgt--t------ttaa----------gtataaagcatcttgt---tcatttttatactga--ttaaatgctgaaatattgttttgaatataccaggttaaataaaatagattaaaatttatttcacctgtttttgtttttttaagtgtaactactagaaaatgtaaaattacacacat--ggtctgcattatatt-tatattagatagcactg-GCTTACCATTCTACTGGTTGGTTAGCTTGTACCTCCAGATAACATCTGATAATCCAATTACTAGCTATCA---CAAA--CTAGATCTTTCAGA-----TGTTTCCTATTAAAATGTTCATTTAATTTTGAAGTGAATTCCTCGAAAAGCTCATATAATACTATTACAG---------AAAATCAAC------TTAACAATT------TGCCCACCATGGAACATAACTTAAGGTAAATCTACATTTCTCTGGT----TAGTATTTACCGTACTGGTAAAGACCAAAGAATTGGTAAGGTTCAACAAAATATGAAAATGCCAGTGATGTTAACA----AAAAA-TAGCT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120412785 665 + 127223203 ACAGTCTTAGTTTGTTGATCTTGAATTCTTTTGGTATTTTAATTTCA--CCAGTAATTCTGGAACTGCTTTTTTCATATTTCTCAAAATGTTTTGTCTtgcattgtccaataaggcagccaccatcatatgtgaccactgagcacttctaacgtag-ctagtcagaattgatatgt--t------ttaa----------gtataaagcatcctgt---tcatttttacactga--ttaaatgctgaaatattgttttgaatataccaggttaaataaaatagattaaaatttatttcacctgtttttggttttttaagtgtaactactagaaaatgtaaaattacacacat--ggcctgcattatatt-tatattagaaagcactg-GCTTACCGTTCTACTGGTTGGTTAGCTTGTACCTCCAGATAACATCTGATAATCCAATTACTAGCTATCA---CAAA--CTAGATCTTTCAGA-----TGTTTCCTATTAAAATGTTAATTTAATTTTGAAGTGAATTCCTCGAAAAGCTCATATAATACTATTACAG---------AAAATCAAC------TTCACAATT------TGCCCACCATGGAACATAACTTAAGGTAAATCTACATTTCTCTGGT----TAGTATTTACCGTAGTGGTAAAGACCAAAGAATTGGTAAGGTTCAACAAAATATGAAAATGCCAGTGATGTTAACA----AAAAA-TAGCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1539083 665 - 2854183 ACAGTCTTAGTTTGTCGATCTTGAATTCTTCTGGTATTTTAATTTCA--CCAGTAATTCTGGAACTGCTTTTTTCATATTTCTCAAAATGTTTTGTATtgcattgtccaataaggcagccaccatcatatgcgaccactgagcacttctaacgtag-ttagtcagaattgatatgt--t------ttaa----------gtataaagcatcttgt---tcatttttatactga--ttaaatgctgaaattttgttttgaatataccaggttaaataaaatagattaaaatttatttcacctgtttttgtttttttaagtgtaactactagaaaatgtaaaattacacacat--ggtctgcattatatt-tatattagatagcactg-GCTTACCATTCTACTGGTTGGTTAGCTTGTACCTCCAGATAACATCTGATAATCCAATTACTAGCTATCA---CAAA--CTAGATCTCTCAGA-----TGTTTCCTATTAAAATGTTCATTTAATTTTGAAGTGAATTCCTCGAAAAGCTCATATAATACTATTACAG---------AAAATCAAC------TTAACAATT------TGCCCACCATGGAACATAACTTAAGGTAAACCTACATTTCTCTGGT----TAGTATTTACCGTACTGGTAAAGACCAAAGAATTGGTAAGGTTCAACAAAATATGAAAATGCCAGTGATGTTAACA----AAAAA-TAGCT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20245651 665 + 27496150 ACAGTCTTAGTTTGTCAATCTTGAATTCTTTTGGTATTTTAATTTCA--CCAGTAGTTCTGGAACTGCTTTTTTCATATTTCTCAAAATGTTTTGTCTtgcattgtccaataaggcaaccaccattatatgtgaccactgagcacttctaatgtag-ctagtcagaattggtatgt--t------ttaa----------gtataaagcatcttgt---tcatttttatactga--ttaaatgctgaaatattgttttgaatataccaggttaaataaaatagattaaaatttatttcacctgtttttgtttttttaagtgtaactactagaaaattttaaattacacatat--ggtctgcattatatt-tatattagacagcactg-GCTTACCGTTCTACTGGTTGGTTAGCTTGTACCTCCAGATAACATCTGATAATCCAATTACTAGCTATCA---CAAA--CTAGATCTTTCAGA-----TGTTTCCTATTAAAATGTTCATTTAATTTTGAAGTGAATTCCTCGAAAAGCTCATATAATACTATTACAG---------AAAATCAAC------TTAACAATT------TGCCCACCATGGGACGTAACTTAAGGTAAATCTACATTTCTTTGGT----TAGTATTTACCGTACTGGTAAAGACCAAAGAATTGGTAAGGTTCAACAAAATATGCAAATGCCAGTGATGTTAACA----AAAAA-TAGCT i colAng1.NW_012115154v1 C 0 C 0 s otoGar3.GL873572 5489974 637 - 12253515 ACTTTCTTAAATGGTTAATCCTGAATTTATTTGGTACTTTTGTAAAT--TCGACAATTCTGGAACTGCTGTTTTCGCATTTCTCAAAATGCTTTGCCTTTcactgttcaac-aggcagctactagt-caccaggctactgagcacttttaatacagcctactccaaattgagatgtcct------ttaa----------ataaaaagtatcttgt---tcacttttaagcttaattaaaataaggaaata---ttctgaatatacccgattgagtaaaat--attaaagcttatgtcaactactttt------taaaatgt---tattagaaaatttaaagttgcatatgt--acttagtgttacattatatattatacagcactgAGTTTGCC----------------------TACTACCAGCTAACATTAGATCATACAATCAACAGATAACACATCAAACCCTGAATCTCTGAGACTGTGTGTTTCTAATTA-----TTCATTTACTTTTGAAGTGAATTCCTAGAGAAGCTCATATGATAC-----CAGAAAATCATTAAGATAAACAAAAATCTAATCATTTTTTAATGGTCAGCATTCAAC-------AAATTAAATCCACAATTCTTTGGTTGAATGGTATTCACT------ATAAAGACCAAAAACCTAGTAACATTCAATAAAATATGGAAATG---------TTATCA----AAAGA-TACCT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16059060 665 + 59632846 TTACTCTTCATTTATCACTCTTAAATTCAGTTGGTATTTCTCTTTAAATTTAGTTCTCCTAGAACTAAAATTTTCCTGTTT-TTAAAATGCTTGCCCTTGCATT-TCCAATAAGGTAGTCACTAAT-TATGAGGCTACTAAGTATTTCTAATATAT-ATGATAAGAAaccagatct--tgaacacttaacatgaaaactgaacgtaacatctcattaataatttttatacaga--tcaaatgctaacata---cttttaatatatgaagttaaac-------attaaaatttatttcacctgcttatttttaat--------actactagaaattttaaaattagatctatgaggtttgcattatatt-tctgttagatggcactg-GCTTACCCTTCTAC----TGGCTAACTCCTTTCTCCAGAAAACATTCCATAATCCAATCACTAGCTATCACATCAAATTTTAAAGCTTTCAGGTTT--TGTTTCTAATTA-----TTCATTTAATTTCTAAGTGAATTCTTAGAAAAGCTCACATATTAG-AAAACTG---------TAAATAAAT------ATAAAGATT------TGACCACTATGAAACAGAATTTAAGCAA----TGAAATGGTTAGGA----TAGACTTCACTATACTGGTAAAGACCAGAAAACTAATGACCTTCAACAAAATATGGAAACACTACTGATGTTAATAATACAAACA-CAGTT i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1229293 2 + 1922530 I e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e aotNan1.NW_018506100v1 3273250 20 - 4527795 I e cebCap1.NW_016107335v1 4922530 185 - 11686629 I e saiBol1.JH378140 17035289 10 + 19594188 I e calJac3.chr8 33699352 10 - 128169293 I a score=1196957.000000 s hg38.chrUn_KI270746v1 58368 163 + 66486 GGAAACCAAAGAATCTTGCTTACATCACAATCACAGCTAGGAAAATGCAGCTTA-TTTTACAGCCGGTCCCCGATGTGAAGAATATGTAGAAACAACAGTAAATAAAAAAGGAAGTATAATACGGAAATGC-------CTAATATCAAAGAAATTCATGTAACAGAATACT s panTro5.chr7 156355948 163 + 166211670 GGAAACCAAAGAATCTTGCTTACATCACAATCACAACCAGGAAAATGCAGCTTA-TTTTACAGCCAGTCCCCAACGTGAAGAATATGTAGAAGAAACAGTAAATAAAAACAGAAGTATAATACAGAAATGC-------CTAATACCAAAGAAAGTCATGTAACAGAATACT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155969033 163 + 162613886 GGAAACCAAAGAATCTTGCTTACATCACAATCACAGCCAGGAAAATGCAGCTTA-TTTTACAGCCAGTCCCCAACGTGAAGAATATGTAGAAGAAACAGTAAATAAAAACAGAAGTATAATACAGAAATGC-------CTAATACCAAAGAAAGTCATGTAACAGAATACT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 8149 163 + 12255 GGAAACCAAAGAATCTTGCTTACATCACAATCACAGCCAGGAAAATGCAGCTTA-TTTTACAGCCAGTCCCCAATGTGAAGAATACGTAGAAGCAACAGTAAATAAAAAAAGAAGTATAATACAGAAATGC-------CTAATATCAAAGAAATTCATGTAACAGAATACT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102842732 163 + 110113093 GGAAACCAAAGAATCTTGCTTACATCACAATCACAGCCAGGAAAATGCAGCTTA-TTTTACAGCCAGTCTCCAGTGTGAAGAATATGTAGAAGAAACAGTAAATAAAAACAGAAGTATAATACAGAAATGC-------CTGATACCAAAGAAATTCATGTAACAGAATACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178459390 159 + 185818997 GGAAACCAGAGAATCTTGCTTACATCACAATCACAGCCAGGAAAATGCAGCTTA-TTTTATAGCCAGTCTCCAATGTGAAGAATATGCAGAAGAAAC----AATAAAAACATAAGTATAATACAGAAATGC-------CTGATATCAAAGAAATTAATGTAACAGAATACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184949121 159 + 192294377 GGAAACCAAAGAATCTTGCTTACATCACAATCACAGCCAGGAAAATGCAGCTTA-TTTTATAGCCAGTCTCCAATGTGAAGAATATGCAGAAGAAAC----AATAAAAACATAAGTATAATACAGAAATGC-------CTGATATCAAAGAAATTAATGTAACAGAATACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7917732 159 + 15219753 GGAAACCAAAGAATCTTGCTTACATCACAATCACAGTCAGGAAAATGCAGCTTA-TTTTATAGCCAGTCTCCAATGTGAAGAATATGCAGAAGAAAC----AATAAAAACATAAGTATAATACAGAAATGC-------CTGATATCAAAGAAATTAATGTAACAGAATACT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9561892 159 + 11639508 GGAAACCAAAGAATCTTGCTTACATCACAATCACAGCCAGGAAAATGCAGCTTA-TTTTATAGCCAGTCTCCAATGTGAAGAATATGCAGAAGAAAC----AATAAAAACATAAGTATAATACAGAAATGC-------CTGATATCAAAGAAATTAATGTAACAGAATACT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120413450 166 + 127223203 GGAAACCAAAGAATCTTGCTTACATCACAATCACAGCCAGGAAAATGCAGCTTA-TTTTATAGCCAGTCTCCAATGTGAAGAATATGCAGAAGAAAC----AATAAAAACATAAGTATAATACAGAAATGCCTGATATCTGATATCAAAGAAATTAATGTAACAGAATACT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1539748 159 - 2854183 GGAAACCAAAGAATCTTGCTTACATCACAATCACAGCCAGGAAAATGCAGCTTA-TTTTATAGCCAGTCTCCAATGTGAAGAATATGCAGAGGAAAC----AATAAAAACATAAGTATAATACAGAAATGC-------CTGATATCAAAGAAATTAATGTAACAGAATACT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20246316 159 + 27496150 GGAAACCAAAGAATCTTGCTTACATCACAATCACAGCCAGGAAAATGTAGCTTA-TTTTATAGCCAGTCCCCAATGTGAAGAATATGCAGAAGAAAC----AATAAAAACGTAAGTATAATACAGAAATGC-------CTGATATCAAAGAAATTAATATAACAGAATACT i colAng1.NW_012115154v1 C 0 I 328 s otoGar3.GL873572 5490611 161 - 12253515 -GAAACCCAAGAATATTG-TTACATCATAATCACTGCCATGAAAATCCATCTTG-TTTTATAGCCAGTTCCCACTACAAAGGACACGTGAAAGAAACACTGAATAAAATCAGAAGTATAACACAGAAATGC-------CTGATATCAAAGACATTTATGTAACAGAATAAT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16059725 155 + 59632846 GAACACCAAAGAATCTTGCTTATATCACAGTCACTGCCATGAACATCCATCTCATTTTTATACCCAGTCCCC-CTACCAAGaatatattaaataaata---aataaaaCCAAAAATATAACACAGGAATGC-------TTGACATCAAAGAAATTCATAGAGTAAG----- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1229295 161 + 1922530 GAAACCCAAAGAATCTTGCTTACATCACGAACAATTCCATAAAAATCCATCTCA-TTTTATAACCAGTCCCCACTGCCAAGAATCTGCAAATGAAACACT-AGAGAAAATAAGAATTTGACACAGGAATGC-------CTGATATCATA-AAATCCATGTAATAGAATCCT i dasNov3.JH575209 I 2 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e aotNan1.NW_018506100v1 3273250 20 - 4527795 I e cebCap1.NW_016107335v1 4922530 185 - 11686629 I e saiBol1.JH378140 17035289 10 + 19594188 I e calJac3.chr8 33699352 10 - 128169293 I a score=2165861.000000 s hg38.chrUn_KI270746v1 58531 327 + 66486 GAACTTCAGTATTTCTAATATACGTATATACACATTCCTG-CTAACTGTAGAATATTTCCTGCAAGTTATGGTCCCAGTGCC--TCACCAATGG----------AAGATCTATCTTGAACTATTCAATTCATACTCTCCCTAATAACAGCA--CTATATTAGCA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTAGATAACTAAAACCAAGATTGGA-----AAACTAAAAAGCT--GGAGGGAGG--GAAAACACAGCCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAATTGATGAAGTAGTAACAAGAGG--GGCAGAAAAACAGAA---AG-AT-TATCATCGGATTTGGGAATTCAA----------- s panTro5.chr7 156356111 328 + 166211670 GAACTTCAGTATTTCTAATATACGGATATACACATTCCTG-CTAACTGTAGAATATTTCCTGCAAGTTATGGTCCCAGTGCC--TCACCAATGG----------AAGATCTATCTTGTACTATTCAATTCATACTCTCCCTAATAACAGCA--CTATATTAGCA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTAGATAACTAAAACCAAGATTGGA-----AAACTAAAAAGCCTCGGAGGGAGG--GAAAACACAGCCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAAATGATGAAGTAGTAACAAGAGG--GGCAGAAAAATAGAA---AG-AT-TATCATCGAATTTGGGAAT-CAA----------- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155969196 328 + 162613886 GAACTTCAGTATTTCTAATATACGGATATACACATTCCTG-CTAACTGTAGAATATTTCCTGCAAGTTATGGTCCCAGTGCC--TCACCAATGG----------AAGATCTATCTTGTACTATTCAATTCATACTCTCCCTAATAACAGCA--CTATATTAGCA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTAGATAACTAAAACCAAGATTGGA-----AAACTAAAAAGCCTCGGAGGGAGG--GAAAACACAGCCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAAATGATGAAGTAGTAACAAGAGG--GGCAGAAAAATAGAA---AG-AT-TATCATCGAATTTGGGAAT-CAA----------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 8312 327 + 12255 GAACTTCAGTATTTCTAATACATGTATATACACATTCCTG-CTAACTGTAGAATATTTCCTGCAAGTTATGGTCCCAGTGCC--TCACCAATGG----------AAGATCTATCTTGTACTATTCAATTCATACTCTCCCTAATAACAGCA--CTATACTAGCA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTAGATAACCAAAACCAAGATTGGA-----AAACTAAAAAGCT--GGAGGGAGG--GAAAACACAGCCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAAATGATGAAGTAGTAACAAGAGG--GGCAGAAAAATAGAA---AG-AT-TATCATCGGACTTGGGAATTCAA----------- i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102842895 326 + 110113093 GAACTTCAGTATTTCTAATATACAGATATACGCATTCCTG-CTATCTATAGAATATTTCCTGCAAGTTATGGTCCCAGTGCA--TCACCAATGG----------AAGATCTATCTTGTACTATTCAATTCATACTCTCCCTAATAACAGCA--CTATATTAGCA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTACACAACTAAAACCAAGATTGGA-----AAACTAAACAACT--GGAGGGAGG--GAAAACACAGCCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAAATGATGAAGTAGT-ACAAGAGG--GGCAGAAAAACAGAA---AG-AT-TATCATCGGATTTGGGAATTCAA----------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178459549 320 + 185818997 GAATTTCAGTATTTCTAATGTAAGGATATACACACTC----CTATCTGTAGAATATTTCCTGCAAGTTATGGCCCCAGTACC--TCACTAATGG----------AAGATCTATCTTGTACTATTCAATTCATACTCTCCCTAATAACAGCA--CTGTATTAGTA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTACGTAACTAAAACCAAGACTGGA-----AAACTAAAAAGCT--GGAGGGAGG--GAAAACACAGCCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAAATGATGAAGTAGTAACAAGAGG--GGCAGAAAAAT-------AG-AT-TATCATCAGATTTGGGAATTGAA----------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184949280 320 + 192294377 GAATTTCAGTATTTCTAATGTAAGGATATACACACTC----CTATCTGTAGAATATTTCCTGCAAGTTATGGCCCCAGTACC--TCACTAATGG----------AAGATCTATCTTGTACTATTCAATTCATACTCTCCCTAATAACAGCA--CTGTATTAGTA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTACGTAACTAAAACCAAGACTGGA-----AAACTAAAAAGCT--GGAGGGAGG--GAAAACACAGCCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAAATGATGAAGTAGTAACAAGAGG--GGCAGAAAAAT-------AG-AT-TATCATCAGATTTGGGAATTGAA----------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7917891 320 + 15219753 GAATTTCAGTATTTCTAATGTAAGGATATACACACTC----CTATCTGTAGAATATTTCCTGCAAGTTATGGCCCCAGTACC--TCACTAATGG----------AAGATCTATCTTGTACTATTCAATTCATACTCTCCCTAATAACAGCA--CTGTATTAGTA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTACGTAACTAAAACCAAGACTGGA-----AAACTAAAAAGCT--GGAGGGAGG--GAAAACACAGCCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAAATGATGAAGTAGTAACAAGAGG--GGCAGAAAAAT-------AG-AT-TATCATCAGATTTGGGAATTGAA----------- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9562051 320 + 11639508 GAATTTCAGTATTTCTAATGTAAGGATATACACACTC----CTATCTGTAGAATATTTCCTGCAAGTTATGGCCCCAGTACC--TCACTAATGG----------AAGATCTATCTTGTACTATTCAATTCATACTCTCCCTAATAACAGCA--CTGTATTAGTA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTACGTAACTAAAACCAAGACTGGA-----AAACTAAAAAGCT--GGAGGGAGG--GAAAACACAGCCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAAATGATGAAGTAGTAACAAGAGG--GGCAGAAAAAT-------AG-AT-TATCATCAGATTTGGGAACTGAA----------- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120413616 320 + 127223203 GAATTTCAGTATTTCTAATGTAAAGATATACACACTC----CTCTCTGTAGAATATTTCCTGCAAGTTATGGCCCCAGTACC--TCACTAATGG----------AAGATCTATCTTGTACTATTCAATTCATAATCTCCCTAATAACAACA--CTGTATTAGCA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTACGTAACTAAAACCAAGACTGGA-----AAACTAAAAAGCT--AGAGGGAGG--GAAAACACAGCCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAAATGATGAAGTAGTAACAAGAGG--GGCAGAAAAAT-------AG-AT-TACCATCAGGTTTGGGAATTGAA----------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1539907 320 - 2854183 GAATTTCAGTATTTCTAATGTAAGGATATACACACTC----CTATCTGTAGAATATTTCCTGCAAGTTATGGCCCTAGTACC--TCACTAATGG----------AAGATCTATCTTGTACTATTCAATTCATACTCTCCCTAATAACAGCA--CTGTATTAGTA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTACGTAACTAAAACCAAGACTGGA-----AAACTAAAAAGCT--GGAGGGAGG--GAAAACACAGCCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAAATGATGAAGTAGTAACAAGAGG--GGCAGAAAAAT-------AG-AT-TATCATCAGATTTGGGAATTGAA----------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20246803 320 + 27496150 GAATTTCAGTATTTCTAATGTAAGGATATACACACTC----CTATCTGTAGAATATTTCCTGCAAGTTATGGCCCCAGAGCC--TCACCAATGG----------AAGATCTATTTTGTACTATTCAATTGATACTCTCCCTAATAACAGCA--CTGTATTACCA---GGTT---CATCATCAAGTGAAGGCTGTTTGCTACATAATTAAAACCAAGACTGGA-----AAACTAAAAAGCT--GGAGGGAGG--GAAAACACAACCTACAAAATGCTTACAAGAT------------------------------------------------------TAGCAGCAAATGATGAAGTAGTAACAAGAGG--GGCAGAAAAAT-------AG-AT-TATCATCAGATTTGGGGATTGAA----------- i colAng1.NW_012115154v1 I 328 C 0 s otoGar3.GL873572 5490772 323 - 12253515 GAACTTCAGTATTTTCAACATGAGGACATTTACAC------TTACATATAAAATATTCCCTCGAAATTATGGTCACAGCACC--TCACCAATGT-----------AGAGCTTTCTTATCCTATTTAATTCATACTTTACACAATAACAGTA--CTATATTACCAAGTGATG---AATCAGCAAGTGAA----GTATGCTACA-AACTAAAACCAAGACTGGA-----TGACTTAAAAGCT--GAAGAGAGG--AAAAGTATGCCCTACAAACTGTTTATGAGCT------------------------------------------------------TATTAGAAAATGATGAAGTACAAAGGAGAGACTAGCAGCTAAATAGAA---AGTATATATTACCAGATTTTGGAATTAAA----------- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16059880 310 + 59632846 AGACTTCAGGGTTTCCACTATAAAAATATACAC---------------TGGAATATTCCCTGGAAGTTATGACCTCAGTACC--TTAGCAATGATAAAAAATAAAAGAGCTGTCTTGTTCTATCCAATTCATACTCTCCACAAAAACAGCA--GTACGTCAGCA---AGCTATGCATTACCAAGTGAAGGTTGTCTGCTACACAACTAATGCCAA--------------CCTAATAGGTT---------------AAACAT-GCCTATGAACAGTTTATGAGAT------------------------------------------------------CAACAGCAAATTATTAAGCAGTAATGAGACAATGGCAAATCAACAGAAAGTAG-AA-TACTACCAGAATTGGGAACTAAA----------- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1229456 407 + 1922530 GAACTTTAGCAATATCAATATTAGGCTATATACATTCTGGTTTATACATAAAATATTCCCCGGAAGTTAGAGCCACAGCACTGATAGAAAGTAG----------AAGTGCTATCTCATCCTATCCAATTAATATTCCCCAGAATAACAGTAGTATATATTAGCC---AGTCATGACTCACCAAGAGAAGGATGCTTGCTATACCTCTGAAACAATGTATGGAAGAAGAAGCTAAGAA-----AAAAGGAGGTTAAAAAAATTGCCTGCAGGGCGTTTATAAGATTAGTTTCTTTGAGTATATTCTTTTCTGACTGCACTCATTGAGAGGGTCCGAAAGTAGCAGCAAATGATGAACTAACAATGAGAGT--GGCGGTTAAATAGAAAGAAG-AA-TAATACCATAGTTAGGACTTAATAGAGAATATAG i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 89236 5669 + 204143 I e aotNan1.NW_018506100v1 3273250 20 - 4527795 I e cebCap1.NW_016107335v1 4922530 185 - 11686629 I e saiBol1.JH378140 17035289 10 + 19594188 I e calJac3.chr8 33699352 10 - 128169293 I a score=10920.000000 s hg38.chrUn_KI270746v1 58858 1 + 66486 A s panTro5.chr7 156356439 1 + 166211670 A i panTro5.chr7 C 0 C 0 s panPan2.chr7 155969524 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 8639 1 + 12255 A i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102843221 1 + 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178459869 1 + 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184949600 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7918211 1 + 15219753 A i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9562371 1 + 11639508 A i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120413936 1 + 127223203 A i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1540227 1 - 2854183 A i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20247123 1 + 27496150 A i colAng1.NW_012115154v1 C 0 C 0 s tarSyr2.KE936121v1 94905 1 + 204143 A i tarSyr2.KE936121v1 I 5669 I 12454 s otoGar3.GL873572 5491095 1 - 12253515 A i otoGar3.GL873572 C 0 I 1 s canFam3.chr16 16060190 1 + 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1229863 1 + 1922530 A i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e aotNan1.NW_018506100v1 3273250 20 - 4527795 I e cebCap1.NW_016107335v1 4922530 185 - 11686629 I e saiBol1.JH378140 17035289 10 + 19594188 I e calJac3.chr8 33699352 10 - 128169293 I a score=361248.000000 s hg38.chrUn_KI270746v1 58859 53 + 66486 -GGCAGCTCAACA-----------AAATACTAGGACATGGCTC-ATATAAGATGGAATAAGCCTGG s panTro5.chr7 156356440 53 + 166211670 -GACAGCTCAGCA-----------AAATACTAGGACATGGCTC-ATATAAGATGGAATAAGCCTGG i panTro5.chr7 C 0 C 0 s panPan2.chr7 155969525 53 + 162613886 -GACAGCTCAGCA-----------AAATACTAGGACATGGCTC-ATATAAGATGGAATAAGCCTGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 8640 53 + 12255 -GAGAGCTCAGCA-----------AAATACTAGGACATGGCTC-ATATAAGATGGAATAAGCCTGG i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102843222 53 + 110113093 -GACAGCTCAGCA-----------AAATACTAGGACATGGCTC-ATACAAGATGGAATAAGCCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178459870 53 + 185818997 -GACAGCTCAGCA-----------AAATACTAGGATATGGTTC-ATATAAGATGGAATAAGCCTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184949601 53 + 192294377 -GACAGCTCAGCA-----------AAATACTAGGATATGGTTC-ATATAAGATGGAATAAGCCTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7918212 53 + 15219753 -GACAGCTCAGCA-----------AAATACTAGGATATGGTTC-ATATAAGATGGAATAAGCCTGG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9562372 53 + 11639508 -GACAGCTCAGCA-----------AGATACTAGGATATGGTTC-ATATAAGATGGAATAAGCCTGG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120413937 53 + 127223203 -GACAGCTCAGCA-----------AAATACTAGCACATGGCTC-ATATAAGATGGAATAGGCCTGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1540228 53 - 2854183 -GACAGCTCAGCA-----------AAATACTAGGATATGGTTC-ATATAAGATGGAATAAGCCTGG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20247124 53 + 27496150 -GACAGCTCAGCA-----------AAATACTAGGACATGGTTC-ATATAAGATGGAATAAGCCTGG i colAng1.NW_012115154v1 C 0 C 0 s otoGar3.GL873572 5491097 55 - 12253515 -GAAATAAGAGCAG----------AAACAACAGAAAATATCACTACATTGGGTAGGATGAGTCTAG i otoGar3.GL873572 I 1 I 5 s canFam3.chr16 16060191 64 + 59632846 -GAGAATACAGCAGAAGCAACAACAAATATTAGGGCATGGGCC-ATATAAAATAGGATAAACCTGG i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1229864 51 + 1922530 AGAAGCAGTAGC------------AAATGATAGGATATGA--C-ATACAAAGTAGGATAACCCTGG i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e aotNan1.NW_018506100v1 3273250 20 - 4527795 I e cebCap1.NW_016107335v1 4922530 185 - 11686629 I e saiBol1.JH378140 17035289 10 + 19594188 I e calJac3.chr8 33699352 10 - 128169293 I a score=70099.000000 s hg38.chrUn_KI270746v1 58912 10 + 66486 ------------AAATACACCC s panTro5.chr7 156356493 10 + 166211670 ------------AAATACACCC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155969578 10 + 162613886 ------------AAATACACCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 8693 10 + 12255 ------------AAATACACCC i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102843275 10 + 110113093 ------------AAATACACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178459923 10 + 185818997 ------------AAATACACCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184949654 10 + 192294377 ------------AAATACACCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7918265 10 + 15219753 ------------AAATACACCC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9562425 10 + 11639508 ------------AAATACACCC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120413990 10 + 127223203 ------------AAATACACCC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1540281 10 - 2854183 ------------AAATACACTC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20247177 10 + 27496150 ------------AAATACACCC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33699362 10 - 128169293 ------------AAACACACTG i calJac3.chr8 I 10 C 0 s saiBol1.JH378140 17035299 10 + 19594188 ------------AAACACACTG i saiBol1.JH378140 I 10 C 0 s otoGar3.GL873572 5491157 10 - 12253515 ------------AAACATACAC i otoGar3.GL873572 I 5 I 2 s canFam3.chr16 16060255 6 + 59632846 -------------AAGACT--- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1229915 22 + 1922530 AAGAATAAAGATAGATACACAC i dasNov3.JH575209 C 0 C 0 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e aotNan1.NW_018506100v1 3273250 20 - 4527795 I e cebCap1.NW_016107335v1 4922530 185 - 11686629 I a score=5649938.000000 s hg38.chrUn_KI270746v1 58922 509 + 66486 CCCTCCCCAA--TATTTCAGAACATAAAGTCTACAGAAAGAGAGTC--CT---AATGTAT-TGAACC------------------TGGTTTCT----CAAT----TGAAACAAAAGTCTTCAAGGAAGGAGAGATAT--GCAAAATTTA--ACAGGAAT--ATATATGAAGCAGTATCTTTAAAGAATGT-AAATATATCAACCAAAAGTAAACTTGAGATTCAAATT-TCCATTGCTAAAGTATTTTCAG--TTAGAATGACATAATTA-TTATATAACTACTCAAAACAAAAC--AAAAC-------------TTACTGGAAAAAAGAACAACTGGTTTGAGAAGAAAAAC--TTTTCATGGTAGAGCA-GAAATAACT-GTCAAAGAGAAAATACTTAG-AAAAAGTCATATATAAAGAGTGGCCTAGTTTTACTGCACACGTCTTTGCCATGCAGAAACAGCTAAATCCCATCTGACAACTACTTTCCCTTTCG--TGTACCTT---G---TCTTTAGAGAATAAAATA------TATCTGGGTTTGATA--T-AGAGGAGACTAATTTTCACATTAAAAA-----TGA-TTT s panTro5.chr7 156356503 516 + 166211670 CCCTCCCCAA--CATTTCGGAACATAAAGTCTACAGAAAAAGAGTC--CT---AATGTAT-TGAACC------------------TGGTTTCT----CAAT----TGAAACAAAAGTCTACAAGGAAGGAGAGATAC--GTAAAATTTA--ACAGGAAT--ACATATGAAGCAGTATCTTTAAAGAATGT-AAATAAATCAACCAAAAGTAAATTTGAGATTCAAATT-TCCATTGGTAAAGTCTTTTCAGAGTCAGAACAACATAATTA-TTATATAACTATTCAAAACAAAAC--AAAAC-------AAAAAGTTACTAGAAAGGAGCACAACTGGTTTGAGAAGAAAAAC--TTTTCATGGTAGAGCA-GAAATAACT-GTCAAGGA--AAATACTTAG-AAAAAGACATATATAAAGAGTGGCCTAGTTTTACTGCACACGTCTTTGCCATGCAGAAACAGCTAAATCCCATCTGACAACTACTTTCCCTTTCG--TGTACCTT---G---TCTTTAGAGAATAAAATA------TATCTGGGTTTGATA--T-AGAGGAGACTAATTTTCACATTAAAAAA----TGA-TTT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155969588 516 + 162613886 CCCTCCCCAA--CATTTCGGAACATAAAGTCTACAGAAAAAGAGTC--CT---AATGTAT-TGAACC------------------TGGTTTCT----CAAT----TGAAACAAAAGTCTACAAGGAAGGAGAGATAC--GTAAAATTTA--ACAGGAAT--ACATATGAAGCAGTATCTTTAAAGAATGT-AAATAAATCAACCAAAAGTAAATTTGAGATTCAAATT-TCCATTGGTAAAGTCTTTTCAGAGTCAGAACAACATAATTA-TTATATAACTATTCAAAACAAAAC--AAAAC-------AAAAAGTTACTAGAAAGGAGCACAACTGGTTTGAGAAGAAAAAC--TTTTCATGGTAGAGCA-GAAATAACT-GTCAAGGA--AAATACTTAG-AAAAAGGCATATATAAAGAGTGGCCTAGTTTTACTGCACACGTCTTTGCCATGCAGAAACAGCTAAATCCCATCTGACAACTACTTTCCCTTTCG--TGTACCTT---G---TCTTTAGAGAATAAAATA------TATCTGGGTTTGATA--T-AGAGGAGACTAATTTTCACATTAAAAAA----TGA-TTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 8703 512 + 12255 CCCTCCCCAA--TATTTCAGAACATAAAATCTACAGAAAGAGAGTC--CT---AATGTAT-TGAACC------------------TGGTTTCT----CCAT----TGAAACAAAAGTCTTCAAGGAAGGAGAGATAC--ATAAAATTTA--ACAGGAAT--ACATATGAAGCAGTATCTTTAAAGAATGT-AAATATATCAACCAAAAGTAAATTTGAGATTCAAATT-TCCATTGCTAAAGTCTTTTCAGAGTCAGAACGACATAATTA-TTATATAGCTATTCAAAACAAAACCAAAAAC-------------TTACTGGAAAGGAGAACAACTGGTTTGAGAAGAAAAAC--TTTTCGTGGTAGAGCA-GAAATAACT-GTCAAGGA--AAATACTTAG-AAAAAGGCATATATAAAGAGTGGCCTAGTTTTACTGCACACGTCTTTGCCATGCAGAAACAGCTAAATCCCATCTGACAACTACTTTCCCTTTCG--TGTACCTT---G---TCTTTAGAGAATAAAATA------TATCTGGGTTTGATA--T-AGAGGAGACTAATTTTCACATTAAAAAA----TGA-TTT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102843285 511 + 110113093 CCCTCCCCAA--TATTTCGGAACATAAAGTCTACAGAAAAAGAGTC--CT---AATGTAT-TGAATA------------------TGGTTTCT----CAAT----TGAAACAAAAGTCTTCCAGGAAGGAGAGATAC--GTAAAATTTA--ACAGGAAT--ACATATGAAGCAGTATCTTTAAAGAATGT-AAATATATCAACCAAAAGTAAA--TGAGATTCAAATT-TCCATTGCTAAAGTCTTTTCAGAGTCAGAACGACATAATTA-TTATGTAACTATTCAAAACAAAAC--AAAAA-------AAAC--TTACTGGAAGGGAGAACAACTGGTTTGAGAAGAAAAAT--CTTTCATGGTAGAGCA-GAAACAACT-GTCAAAGA--AAATACTTAG-AAAAAGGCATATATAAAGAGTGGCCTAGTTTTACTGCACACGTCTTTGCCACGCAGAAACAGCTAAATCCCATCTGACAACTACTTTGCCTTTCG--TGTACCTT---G---TCTTTAGAGAATAAAATA------TTTCTGGGTTTGATA--T-AGAGGAGACTAATTTTCACATTAAAAA-----TGA-TTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178459933 515 + 185818997 CCCTCCCCAA--TATTTCAGAACATAAAGTCTACAGAAAAAGAGTC--CT---AATGTAT-TGAATC------------------TGGTTTCT----CAAC----TGAAACAAAAGTCTTCAAGGAAGAAGATACAT--GTAAAATTTT--ACAGGAAT--ACATATGAAGTAGTATCTTTAAAGAATGT-AAATATATGAACCAAAAGTAAATGTGAGATTCAAATT-TCCATTGCTAAAGTCTTTTCAGAGTCACGACGACATTATTA-TTATACAACCATTCAAAATAAAAC--AAAAA-------AAC---TTACTGGAAAGGAGAACAACTGGTTTGAGAAGAAAAAC--CTTTCTTGGTAGAGCA-GAAACAAAT-GTCAAGGA--AAATACTTAGAAAAAAGGCATATATAAAGAATGGTCTAGTTTTACTGCATACGTCTTTGCCATGCAGAAACAGCTAAATCCCATCTGACAACTACTTTGCCTTTGG--TGTACCTT---G---TCTTTAGAGAACAAAATA------TATCTGGGTTTGATA--T-AGAGGAGACTAATTTTCAAATTAAAAAA----TGATTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184949664 515 + 192294377 CCCTCCCCAA--TATTTCAGAACATAAAGTCTACAGAAAAAGAGTC--CT---AATGTAT-TGAATC------------------TGGTTTCT----CAAC----TGAAACAAAAGTCTTCAAGGAAGAAGATACAT--GTAAAATTTT--ACAGGAAT--ACATATGAAGTAGTATCTTTAAAGAATGT-AAATATATGAACCAAAAGTAAATGTGAGATTCAAATT-TCCATTGCTAAAGTCTTTTCAGAGTCACGACGACATTATTA-TTATACAACCATTCAAAATAAAAC--AAAAA-------AAC---TTACTGGAAAGGAGAACAACTGGTTTGAGAAGAAAAAC--CTTTCTTGGTAGAGCA-GAAACAAAT-GTCAAGGA--AAATACTTAGAAAAAAGGCATATATAAAGAATGGTCTAGTTTTACTGCATACGTCTTTGCCATGCAGGAACAGCTAAATCCCATCTGACAACTACTTTGCCTTTGG--TGTACCTT---G---TCTTTAGAGAACAAAATA------TATCTGGGTTTGATA--T-AGAGGAGACTAATTTTCAAATTAAAAAA----TGATTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7918275 515 + 15219753 CCCTCCCCAA--TATTTCAGAACATAAAGTCTACAGAAAAAGAGTC--CT---AATGTAT-TGAATC------------------TGGTTTCT----CAAC----TGAAACAAAAGTCTTCAAGGAAGAAGATACAT--GTAAAATTTT--ACAGGAAT--ACATATGAAGTAGTATCTTTAAAGAATGT-AAATATATGAACCAAAAGTAAATGTGAGATTCAAATT-TCCATTGCTAAAGTATTTTCAGAGTCACGACGACATTATTA-TAATACAACCATTCAAAATAAAAC--AAAAA-------AAC---TTACTGGAAAGGAGAACAACTGGTTTGAGAAGAAAAAC--CTTTCTTGGTAGAGCA-GAAACAAAT-GTCAAGGA--AAATACTTAGAAAAAAGGCATATATAAAGAATGGTCTAGTTTTACTGCATACGTCTTTGCCACGCAGAAACAGCTAAATCCCATCTGACAACTACTTTGCCTTTGG--TGTACCTT---G---TCTTTAGAGAACAAAATA------TATCTGGGTTTGATA--T-AGAGGAGACTAATTTTCAAATTAAAAAA----TGATTTT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9562435 515 + 11639508 CCCTCCCCAA--TATTTCAGAACATAAAGTCTACAGAAAAAGAGTC--CT---AATGTAT-TGAATC------------------TGGTTTCT----CAAC----TGAAACAAAAGTCTTCAAGGAAGGAGATACAT--GTAAAATTTT--ACAGGAAT--ACATATGAAGTAGTATCTTTAAAGAATGT-AAATATATGAACCAAAAGTAAATGTGAGATTCAAATT-TCCATTGCTAAAGTCTTTTCAGAGTCACGACGACATTATTA-TTATACAACCATTCAAAACAAAAC--AAAAA-------AAC---TTACTGGAAAGGAGAACAACTGGTTTGAGAAGAAAAAC--CTTTCTTGGTAGAGCA-GAAACAAAC-GTCAAGGA--AAATACTTAGAAAAAAGGCATATATAAAGAATGGTTTAGTTTTACTGCATACGTCTTTGCCATGCAGGAACAGCTAAATCGCATCTGACAACTACTTTGCCTTTGG--TGTACCTT---G---TCTTTAGAGAACAAAATA------TATCTGGGTTTGATA--T-AGAGGAGGCTAATTTTCAAATTAAAAAA----TGATTTT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120414000 511 + 127223203 CCCTCCCCAA--TATTTCAGAACATAAAGTCTACAGAAAAAGAGTC--CT---AATGTAT-TGAATC------------------TGGTTTCT----CAAC----TGAAACAAAAGTCTTCAAGGAAGGAGATATAT--GTAAAATTTT--ACAGGAAT--ACATATAAAGCAGTATCTTTAAAGAATGT-AAATATATGAACCAAAAGTAAATCTGAGATTCAAATT-TCCATTGCTAAAGTCTTTTCAGAGTC---ACAACATTATTA-TTATATAACTATTCAAAACAAAAC--AAAAA-------AAC---TTACTGGAAAGGAGAACAACTGGTTTGAGAAGAAAAAC--CTTTCTTGGTAGAGCA-GAAACAAAT-GTCAAGGA--AAATACTTAG-AAAAAGGCATATATAAAGAATGGTCTAGTTTTACTGCATATGTCTTGGCCATGCAGAAACAGCTAAATCCCATCTGACAACTACTTTGCCTTTGG--TGTACCTT---G---TCTTTAGGGAACAAAATA------TATCTGGGTTTGATA--T-AGAGGAGACTAATTTTCAAATTAAAAAA----TGATTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1540291 515 - 2854183 CCCTCCCCAA--TATTTCAGAACATAAAGTCTACAGAAAAAGAGTC--CT---AATGTAT-TGAATC------------------TGGTTTCT----CAAC----TGAAACAAAAGTCTTCAAGGAAGGAGATACAT--GTAAAATTTT--ACAGGAAT--ACATATGAAGTAGTATCTTTAAAGAATGT-AAATATATGAACCAAAAGTAAATGTGAGATTCAAATT-TCCATTGCTAAAGTCTTTTCAGAGTCACGACAACATTATTA-TTATACAACCATTCAAAACAAAAC--AAAAA-------AAC---TTACTGGAAAGGAGAACAACTGGTTTGAGAAGAAAAAC--CTTTCTTGGTAGAGCA-GAAACAAAT-GTCAAGGA--AAATACTTAGAAAAAAGGCATATATAAAGAATGGTCTAGTTTTACTGCATAAGTCTTTGCCATGCAGAAACAGCTAAATCCCATCTGACAACTACTTTGCCTTTGG--TGTACCTT---G---TCTTTGGAGAACAAAATA------TATCTGGGTTTGATA--T-AGAGGAGACTAATTTTCAAGTTAAAAAA----TGATTTT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20247187 515 + 27496150 CCCTCCCCAA--TATTTCGGAACATAAAGTCTACAGAAAAAGAGTC--CT---AATGTAT-TGAATC------------------TGGTTTCT----CAAC----TGAAACGAAAATCTTCAAGGAAGGAGATATAC--GTAAAATTTT--ACAGGAAT--ACATATGAAGCAGTATCTTTAAAGAATGT-AAATATATGAACCAAAAGTAAATCTGAGATTCAAATT-TCCATTGCTAAAGTCTTTTAAGAGTCACAACGACATTATTA-TTATACAACTATTCAAAACAAAAC-AAAAAA-------AAC---TTACTGGAAAGGAGAATAATTGGTTTGAGAAGAAAAAC--CTTTCTTGGTAGAGCA-GAAACAAAT-GTCAAGGA--AAATACTTAG-AAAAAGGCATATATAAAGAATGGTCTAGTTTTACTGCATATGTGTTTGCCATGCAGAAACAGCTAAATCCTACCTGACAACTACTTTGCCTTTGG--TGTACCTT---G---TCTTTAGAGAACAAAATA------TATCTGAGTTTGATA--T-AGAGGAGACTAATTTTCAAATTAAAAAA----TGATTTT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33699372 508 - 128169293 CCCTCCCCAA--TATTTTGGAACATAAAGTCCACAGAAAAAGAGTC--CT---AATGTAT-TGAATC------------------TGGTTTCT----CAGT----TGAAATGAAAGTCTTCAAGGAAGGAGAGATAT--GTAAAATTTA--ACAGGAAT--AAATATGAAGCAGTATCTTTAAAGAATAT-AAATATATGAACCAAAAGTAAATTTGAGATTCAAATT-TCCATTGCTGAAGTCTTTTCAGAGTCATAACAACATAGTGA-TTATATAACTATTCAAAACAAAAC--AAAAC-------------TTACTGGAGAGGAGAAAAACTGGTTTGAGAAGAAAAAT--CTTTCTTGATAGAGCA-GAAACAAAT-GTCAAGGA--AAGTACTTAG--AAAAGGGCTATATAAAGAGTGCTCTAGTTCTACTTCACATGTATTTGTCTTGCAGAAACAGTTAAATCTCATCTGACAAACACTTTGCCTTTGG--CGTA-CTA---G---TCTTTAGAGAATAAAATA------TATCTGGGTTTGATA--T-AGAGGAAACTGATTTTCACattaaaaa-----taatttt i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17035309 518 + 19594188 CCCTCCCCAA--TATTTTGGAACATAAAGTCCACAGAAAAAGACTC--CT---AATGTAT-TGAATC------------------TGGTTTCT----CAGC----TGAAACGAAAGTCTCCAAGGAAGGAGAGATAT--GTAAAATTTA--ACAGTAAT--ATATATGAAGGAGTATCTTTAAAGAATAT-AAATACATGAACCAAAAGTAAATTTGAGATTCAAATT-TCCATTGCTAAAGTCTTTTCAGAGTCAGAACAACATAATGA-TTACATAACTATTcaaaacaaaac--aaaacaaaac-aaaT---TTACTGGAGAGGAGAACAACTGGTTAGAGAAGAAAAAT--CTTTCTTGATACAGCA-GAAACAAAT-GTCAAGGA--AAATACTTAG--AAAAGGCCTACATAAAGAGTGTTCTAGTTTTACTGCACATGTATTTGTCTTACAGAAACAGTTAAATCTCATCTGACAAATACTTTGCCTTTGG--CGTACCTT---G---TCTTTAGAGAATAAAACA------TATCTGGGTTTGATA--T-AGAAGAGACTCatttttacattaaaaa-----taatttt i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4922715 513 - 11686629 CCCTCCCCAG--TATTTTGGAACATAAAGTCCACAGAAAAAGAGTC--CT---AATATAT-TGAATC------------------TAGTTTCT----CAGT----TGAAACAAAAGTCTCCAAGGAAGAAGAGATAT--TTAAAATTTA--ACAGTAAT--ACACATGAAGCAGTATCTTTAAAGAATAC-AAATATATGAACCAAAAGTAAATTTGAGATTCAAATT-TCCATTGCTAAAATCTTTTCAGGGTCAGAACAACATAATGA-TTATCTAAC--TTCAAAACAAAAC--AAAAC---AA-AAAC---TTACTGGAGAAGAGAACAACTGGTTTGAGAAGAAAAAT--CTTTCTTGATAGAGCA-GAAACAAAT-GTCAAGGA--AAATACTTAG--AAAAGGCCTATATAAAGAGTGTTCTAGTTTTACTGCATATGTATTTGTCTTACAGAAACAGTTAAATCTCATCTGACAAATACTTTGCCTTTGG--TGTATCTT---G---TCTTTAGAGAATAAAATA------TATCTGGGTTTGATA--T-AGAGGGGACTAATTTTCACATTAAAAA-----TAATTTT i cebCap1.NW_016107335v1 I 185 C 0 s aotNan1.NW_018506100v1 3273270 510 - 4527795 CCCTCCCCAA--TATTTTGGAGCATAAAGTCCACAGAAAAAGAGTCCTCT---AATGTAC-TGAATC------------------TGGTTTCT----CAGT----TGAAACGAAAGTCTCCAAGGAAGGAGAGATAC--GTAAAATTTA--ATAGGAAT--ACATATGAAGCAGTATCTTTACAGAATAT-AAATATATGAACCAAAAGTAAACTTGAGATTCAAATT-TCCATTGCTAAAGTCTTTTCAGAGTCAGAACAACATAACGA-TTATATAACTATTcaaaacaaaac--aaaacaaaacaaaac---TTACTGGAGAGGAGCACAACTGGTTTGAGAAGAAAAAT--CTTTCTTGATAGAGCA-GAAACAAAC-GTCAAGGA--AAATACTTAG--AAAAGGCCTGTATGA--AGTGTTCTAGTTTTACTGCACATGTATTTGTCTTGCAGAAACAGTTAAATCTCATCTGACAAATACTTTGCCTTTGG--CATACCTT---------------AAATAAAATA------TATCTCGGTTTGATA--T-AGAGAAGACTAATTTTCACATTAAAAA-----TAATTTT i aotNan1.NW_018506100v1 I 20 C 0 s otoGar3.GL873572 5491169 494 - 12253515 --ATAGACAAATTATTCTGGA--ATAAAGTCAATTGGAAAATAGTC--TT---AATGTAC-TGAACC------------------TGAATCTGGGTATGGT----TGGAATATAAGTCTCCAAATAAGGAG---------TAAAATTTAATACAGCATTTAATTTATGATGCAGTATATTTAAAGAATGTAAAACATCAGAACCAAAAGTAAATTTGAGATTCAAATTGCCCATTGCTAAAGTATTTTCAGAATCAGAGCTACATAATTATTTAAACTACTTTGTAAAAAAGGGT--------------AAT---TTACT------GAGAAGAACTAGTTTGAAAAGAAAATT--CCTAC-----AGAGCA-CAAATAAAT-GTCAAGGA--AAATACTTAG-GAAAAGGCAGAAATGATGGGTGTTTTAGTT-TACTGCATCT----------------AATAACTAAATCCCATGTGGCAACTAC-TTGCCTTTGG--GATAACCT---G---TCTTTAGAGACTAAAATATATGCCTATATGGGTTTTATATTT-AGAGGCAACTAATTTTCACATTAAAATAAAGTTAGATTT i otoGar3.GL873572 I 2 C 0 s canFam3.chr16 16060261 527 + 59632846 CTCACACACA--TATACTAACACACAGACTC-ACAGGCACATAGAC--CTTAGAATGAATGTAAGTCAACAGAAAATAATCCTAATGGCTTCC----CAGT----TGGAATAGAAGTCTCTAAATAAGGAGAAATAC-AGTAAAATTTG--ACAGGAAT--ATTTATGATGCAGTATCTTTAAAGAATGT-AAATATCTGAACCAAAATTAAATTTGAGATTGAAATC-TCCATTGCTAGA-TTTTTTCAGAGCCAAAACCACATAATTG-TTATTGAACAATTATCAAGAAAAG--AAAAC-------AAGA--GTAAGGAAGAGGA----AACTGGTTTGAGAACAAAACC--ATCTCTTGGTAGAACATAAAATAAAT-ATCATGGA--AAATACTTAG-AGAAAGGCATATATGGAGGAGTGTCTTAGTTTACTGTGAATGTCTTTGC----CAGAAATAGTTCCATCCCATGAGGCAATT---TTGCCTCTGGTATGTAACTTGCTG---TCTTTAGAGAATAAAATA------TACCTAGAATT------T-AGAGGAGACTAATTCTCACATTAGAATA----AAATTCT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1229937 512 + 1922530 -----ATCAC--AACTTTAGAATG-GAAGTCAATAGAAAAATAGTC--CC---AATATAC-TGAATT------------------TGGCTTCC----CAATTTACTGGAACATAAGTCTCCAAATAAGGAGTGAGACCAGCAAAATGTA--ACAAAAAT--ATTTATGATGCAGTATCTTAAAAGTACAT-AAATATCTGAACCAAAAGT-AATTTGACATTCAAATT-TTAGCTGCT--AGTCTTTTCATAATCA--ACTACAT-ATTA-TTATATAACTATACATGCATTAGT--TGGGTTCTACTTAAA---CTACTGGGGAGGAAGGAAACTGGTTTGAGAAGAAAAATCACTCTCTTGGAAGAAAA-AAAAAAAACAACCCAAGA--AAACACTTAG-AGTAAGGCTTATAT--AGAGTGCTTTAGTT-TACTATGTATCTCTTCACCAT----AAATAGCT-AATCCCATGTGGCAAGTACTCTGCCATTGT--TGTAATCT---GTTATCTTTAGGGAATAAAATA------TATCTGGATTTTAAG--TCAAAAGAGACTAATTTCAACATTAAAAT-----TGAGTT- i dasNov3.JH575209 C 0 M 359 e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=-15305.000000 s hg38.chrUn_KI270746v1 59431 4 + 66486 TCTT---- s panTro5.chr7 156357019 4 + 166211670 TCTT---- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970104 4 + 162613886 TCTT---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9215 4 + 12255 TCTT---- i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102843796 4 + 110113093 TCTT---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178460448 4 + 185818997 TCTT---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184950179 4 + 192294377 TCTT---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7918790 4 + 15219753 TCTT---- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9562950 4 + 11639508 TCTT---- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120414511 4 + 127223203 TCTT---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1540806 4 - 2854183 TCTT---- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20247702 4 + 27496150 TCTT---- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33699880 2 - 128169293 ta------ i calJac3.chr8 C 0 I 315 s saiBol1.JH378140 17035827 3 + 19594188 tta----- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923228 3 - 11686629 TTA----- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3273780 3 - 4527795 TTA----- i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5491663 1 - 12253515 T------- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16060788 8 + 59632846 ATTTTCCC i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1230449 359 + 1922530 M e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=1109313.000000 s hg38.chrUn_KI270746v1 59435 102 + 66486 AAAAGCCTGGCCTTACAGTTTAAAAATTATACGATTAAAATCAA---GATATTATTCCTATAAAAAGCCAAACTTTAATC--------CA-TTTAAATCATGA------AACTTAAAACT s panTro5.chr7 156357023 102 + 166211670 AAAAGCCTGGCCTTACAGTTTAAAAATTATACGATTAAAATCAA---TATATTATTCCTATAAAAAGCCAAACGTTAATC--------CA-Tttaaatcatga------aacttaaaact i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970108 102 + 162613886 AAAAGCCTGGCCTTACAGTTTAAAAATTATACGATTAAAATCAA---TATATTATTCCTATAAAAAGCCAAACGTTAATC--------CA-Tttaaatcatga------aacttaaaact i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9219 102 + 12255 AAAAGCCTGGCCTTACAGTTTAAAAATTATACGATTAAAATCAA---GATATTATTCCTATAAAAAGCCAAACTTTAATC--------CA-Tttaaatcatga------aacttaaaact i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102843800 102 + 110113093 AAAAGCCTGGCCTTACAGTTTTAAAATTATATGATCAAAATCAA---GATATTATTCCTATAAAAGGCCAAACTTTAATC--------CA-Tttaaatcatga------aacttaaaact i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178460452 102 + 185818997 AAAAGCCTGGCCTTACAGTTTAAAAATTATATGATTAAAATCGA---GATATTATTCCTATAAAAAGCCAAACTTTAATC--------CA-Tttaaatcatga------aacttaaaact i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184950183 102 + 192294377 AAAAGCCTGGCCTTACAGTTTAAAAATTATATGATTAAAATCAA---GATATTATTCCTATAAAAAGCCAAACTTTAATC--------CA-Tttaaatcatga------aacttaaaact i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7918794 102 + 15219753 AAAAGCCTGGCCTTACAGTTTAAAAATTATATGATTAAAATCGA---GATATTATTCCTATAAAAAGCCAAACTTTAATC--------CA-Tttaaatcatga------aacttaaaact i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9562954 102 + 11639508 AAAAGCCTGGCCTTACAGTTTAAAAATTATATGATTAAAATCGA---GATATTATTCCTATAAAAAGCCAAACTTTAATC--------CA-Tttaaatcatga------aacttaaaact i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120414515 102 + 127223203 AAAAGCCTGGCCTTACAGTTTAAAAATTATATGATTAAAATCGA---GATATTATTCCTATAAAAAGCCAAACTTTAATC--------CA-Tttaaatcatga------aacttaaaact i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1540810 102 - 2854183 AAAAGCCTGGCCTTACAGTTTAAAAATTATATGATTAAAATCGA---GATATTATTCCTATAAAAAGCCAAACTTTAATC--------CA-Tttaaatcatga------aacttaaaact i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20247706 102 + 27496150 AAAAGCCTGGCCTTACAGTTTAAAAATTATATGATTAAAATCAA---GATATTATTCCCATAAAAAGCCAAACTTTAATC--------CA-Tttaaaacatga------aacttaaaact i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700197 102 - 128169293 aaaaaaCTGGCCTTACAGTTTGAAAATTGTATGATTAAAATCAA---GGTATTATTCCTATAAAAAGTCAAACTTTAATC--------CA-TTTAAATCACAA------AACTTAAAACT i calJac3.chr8 I 315 C 0 s saiBol1.JH378140 17035830 97 + 19594188 aaaaaaCTGGCCTTACAGTTTGAA-----TATTATTAAAGTCAA---GATATCATTCCTATAAAAAGCCAAACTTTAATC--------CA-TTTAAATCACAA------AACTTAAAACT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923231 102 - 11686629 AAAAAACTGGCCTTACAATTTGAAAATTATATTATTAAAATCAA---GATATTATTCCTATAAAAAGCCAAACTTTAATC--------CA-Tttaaatcacaa------aacttaaaact i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3273783 102 - 4527795 AAAAAACTGGCCTTACGGTTTGAAAATTATATGATTAAAATCAA---GATATTATTCCTATAAAAAGCcaaactttaatc--------ca-tttaaatcataa------aacttaaaact i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5491664 76 - 12253515 TAAAAAGTAGCCTTACAATTTCAAAATTAGATGATCCTGGTCAA---GATATCATTCCT-TAAAAAGTCAAACATTAACC---------------------------------------- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16060796 113 + 59632846 -----ACTTATTTTAGGATTCCAAAATTGGATGATCCAGATCGAGATGATACTACTCCTATAAA--GGCAAACTTTAATCACTGGAAGCATTTTAAATCATGAGATTTTAATTTGAAACT i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1230449 359 + 1922530 M e eulMac1.LGHX01002433v1 86113 9177 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=16862.000000 s hg38.chrUn_KI270746v1 59537 2 + 66486 TC s panTro5.chr7 156357125 2 + 166211670 ta i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970210 2 + 162613886 ta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9321 2 + 12255 ta i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102843902 2 + 110113093 ta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178460554 2 + 185818997 ta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184950285 2 + 192294377 ta i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7918896 2 + 15219753 ta i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9563056 2 + 11639508 ta i cerAty1.NW_012008583v1 C 0 I 305 s chlSab2.chr21 120414617 2 + 127223203 ta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1540912 2 - 2854183 ta i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20247808 2 + 27496150 ta i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700299 2 - 128169293 TA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17035927 2 + 19594188 TA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923333 2 - 11686629 ta i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3273885 2 - 4527795 tc i aotNan1.NW_018506100v1 C 0 C 0 s eulMac1.LGHX01002433v1 95290 2 - 871265 TC i eulMac1.LGHX01002433v1 I 9177 C 0 s eulFla1.LGHW01002455v1 96397 2 - 882459 TC i eulFla1.LGHW01002455v1 N 0 C 0 s canFam3.chr16 16060909 2 + 59632846 TC i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1230449 359 + 1922530 M e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5491740 0 - 12253515 C a score=44475.000000 s hg38.chrUn_KI270746v1 59539 4 + 66486 ---------------------------ACTT s panTro5.chr7 156357127 4 + 166211670 ---------------------------actt i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970212 4 + 162613886 ---------------------------actt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9323 4 + 12255 ---------------------------actt i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102843904 4 + 110113093 ---------------------------actt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178460556 4 + 185818997 ---------------------------actt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184950287 4 + 192294377 ---------------------------actt i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7918898 4 + 15219753 ---------------------------actt i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9563363 4 + 11639508 ---------------------------actt i cerAty1.NW_012008583v1 I 305 C 0 s chlSab2.chr21 120414619 4 + 127223203 ---------------------------actt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1540914 4 - 2854183 ---------------------------actt i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20247810 4 + 27496150 ---------------------------actt i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700301 4 - 128169293 ---------------------------ACTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17035929 4 + 19594188 ---------------------------ACTT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923335 4 - 11686629 ---------------------------actt i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3273887 4 - 4527795 ---------------------------actt i aotNan1.NW_018506100v1 C 0 C 0 s eulMac1.LGHX01002433v1 95292 4 - 871265 ---------------------------ACTA i eulMac1.LGHX01002433v1 C 0 I 2293 s eulFla1.LGHW01002455v1 96399 4 - 882459 ---------------------------ACTA i eulFla1.LGHW01002455v1 C 0 I 2295 s otoGar3.GL873572 5491740 4 - 12253515 ---------------------------ACTG i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16060911 31 + 59632846 AAATCACCATTGtttttttaaggttttactt i canFam3.chr16 C 0 I 74 e dasNov3.JH575209 1230449 359 + 1922530 M e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=819570.000000 s hg38.chrUn_KI270746v1 59543 80 + 66486 GAAGCAATTTCAAT-CATGAA-----ACTT--AAAACTC--------------------------------------------------------------------CAAATTACTATTGTGAATTAACACTTCTCCACTATTT---ATCTTGCAATTT s panTro5.chr7 156357131 83 + 166211670 gaagcaatttcaat-catgaa-----actt--aaaactc--------------------------------------------------------------------caaattaCTATTGTGAATTAACACTTCTCCACTATTTGTTATCTTGCAATTT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970216 83 + 162613886 gaagcaatttcaat-catgaa-----actt--aaaactc--------------------------------------------------------------------caaattaCTATTGTGAATTAACACTTCTCCACTATTTGTTGTCTTGCAATTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9327 80 + 12255 gaagcaatttcaat-catgaa-----actt--aaaactc--------------------------------------------------------------------caaattaCTATTGTGAATTAACACTTCTCCACTATTT---ATCTTGCAATTT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102843908 83 + 110113093 gaagcaatttcaat-catgaa-----actt--aaaactc--------------------------------------------------------------------caaattaCTATTGTGAATTAACACTTCTCCACTATTTGTTATCTTGCAATTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178460560 83 + 185818997 gaagcaatttaaat-catgaa-----actt--aaaactC--------------------------------------------------------------------CATATTACCACCGTGAATTAACACTTCTCCACTACCTGTTATCTTGCAATTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184950291 83 + 192294377 gaagcaatttaaat-catgaa-----actt--aaaactC--------------------------------------------------------------------CATATTACCACCGTGAATTAACACTTCTCCACTACCTGTTATCTTGCAATTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7918902 83 + 15219753 gaagcaatttaaat-catgaa-----actt--aaaactC--------------------------------------------------------------------CATATTACCACCGTGAATTAACACTTCTCCACTACCTGTTATCTTGCAATTT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9563367 83 + 11639508 gaagcaatttaaat-catgaa-----actt--aaaactC--------------------------------------------------------------------CATATTACCACTGTGAATTAACACTTCTCCACTACCTGTTATCTTGCAATTT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120414623 83 + 127223203 gaagcaatttaaat-catgaa-----actt--aaaactC--------------------------------------------------------------------CATATCACTACCGTGAATTAACACTTCTCCACTACCTGTTATCTTGCAATTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1540918 83 - 2854183 gaagcaatttaaat-catgaa-----actt--aaaactC--------------------------------------------------------------------CATATTACCACCGTGAATTAACACTTCTCCACTACCTGTTATCTTGCAATTT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20247814 83 + 27496150 gaagcaatttaaat-catgaa-----actt--aaaactc--------------------------------------------------------------------caaattactactgtgaattaacacttCTCCACTACCTGTTATCTTGCAATTT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700305 82 - 128169293 T---TAATTTCAAT-CATGAA-----ACTTAAAAAACTC--------------------------------------------------------------------CAAATTACTATTGTAAATTAACACTTCTCCACTATTTGTTATCTTGCAATTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17035933 79 + 19594188 TAAGCAATTTCAAT-CATGAA-----ACTT--AAAACTC--------------------------------------------------------------------CAAATTACTATTGTAAATTAACACTTCTCCACTA----TTATCTTGCAATTT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923339 80 - 11686629 taagcaattttaat-catgaa-----actt--aaaactc--------------------------------------------------------------------caaattaCTATTGTAAATGAACACTTCTCCACTA--TGTTATCTTGC-ATTT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3273891 83 - 4527795 taagcaatttcaat-catgaa-----actt--aaaactc--------------------------------------------------------------------caaattactattgtaaattaacacttCTCCACTATTTGTTCTCTTGCAATTT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5491744 83 - 12253515 GAAGCAATCTTAAT-CATGAG-----ATTT--AGAACTC--------------------------------------------------------------------AAAATTACTATTGTGGCTCAACATTTGTCATCTGTTTGATATTCTGTTAATT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16061016 152 + 59632846 gaagcaggctccatgcaggaagcctgactt--gggactcccacgtctccaggatcaggccctgggctgaaggcggcgctaaatcgctgagccaccagggctgcccTTCAAATCACCATTGTGACTAAATAC---CACATTGTTTGATATCTTGCCAT-- i canFam3.chr16 I 74 C 0 e dasNov3.JH575209 1230449 359 + 1922530 M e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=1199898.000000 s hg38.chrUn_KI270746v1 59623 103 + 66486 TAAAAAACACTTCAGAAAGTAGCAAATTTGTAAAACAATAAA-------------------------TAATTTGTACCTATAGTATCCTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTA------------------------------GAAA s panTro5.chr7 156357214 107 + 166211670 TAAAAAACACTTCAGAAAGCAGCAATTTCGTAAAACAATAAA-------------------------TAATTCGTACCTACAGTATCTTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970299 107 + 162613886 TAAAAAACACTTCAGAAAGCAGCAATTTCGTAAAACAATAAA-------------------------TAATTCGTACCTACAGTATCTTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9407 106 + 12255 T-AAAAACACTTCAGAAAGTAGCAAATTTGTAAAACAATAAA-------------------------TAATTCGTACCTATAGTATCCTCATTTTGCCATG---C---------AGTTTTATTTAAATC--------------TCACTTAA--------------------------AAAGAAA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102843991 107 + 110113093 TAAAAAACACTTCAGAAAGTAGCAATTTTGTAAAACAATAAA-------------------------TAATCCGTACCTATAGTACCTTCATTTTGCCATG---C---------AGTTTTACTTACATC--------------TCACTTAA--------------------------AAAGAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178460643 107 + 185818997 TAAAAAACACTTCAGAAAGTAGCAATTTCATAAAATTATGAA-------------------------TAGTTCATACCTATAGTATCTTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184950374 107 + 192294377 TAAAAAACACTTCAGAAAGTAGCAATTTCATAAAATTATGAA-------------------------TAGTTCATACCTATAGTATCTTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7918985 107 + 15219753 TAAAAAACACTTCAGAAAGTAGCAATTTCATAAAATTATGAA-------------------------TAGTTCATACCTATAGTATCTTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9563450 107 + 11639508 TAAAAAACACTTCAGAAAGTAGCAATTTCATAAAATTATAAA-------------------------TAGTTCATACCTATAGTATCTTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120414706 107 + 127223203 TAAAAAACACTCCAGAAAGTAGCAATATCGTAAAATGATAAA-------------------------TAGTTCGTACCTATAGTATCTTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1541001 107 - 2854183 TAAAAAACACTTCAGAAAGTAGCAATTTCATAAAATTATAAA-------------------------TAGTTCATACCTATAGTATCTTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20247897 107 + 27496150 TAAAAAACACTTCAGAAAGTAGCAATTTCGTAAAATGATAAA-------------------------TAGTTCATACCTATAGTATCGTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700387 107 - 128169293 TAAAAAACACTTCAGAAAGTAGCAATCTTGTAAAATGATAAA-------------------------TAATTCATACCTAAACTATCTTCATTTTGGTATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17036012 107 + 19594188 TAAGAAACACTTCAGAAAGTAGCAATTTTGTAAAATGATAAA-------------------------TAATTCATACCTAAAGTATCTTCATTCTGTCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923419 107 - 11686629 TAAAAAACACTTCAGAAAGTAGCAATTTTGTAAAATGATAAA-------------------------TAATTCATAACTAAAGTATCTTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3273974 107 - 4527795 TAAAAAACACTTCAGAAAGTAGCAATTTTGTAAAATGATAAA-------------------------TAATTCATACCTAAAGTATCTTCATTTTGCCATG---C---------AGTTTTACTTAAATC--------------TCACTTAA--------------------------AAAGAAA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5491827 180 - 12253515 T-AAAAACACTACATAAAGTAACAATTTTACAAAAGAAGTAATTCTTAACTACTTAgctaagcatagtggctcgcacctgtaaacccagcactttgggagg---ccaagggggaagtatcacttaaagccaggagtttgagattagcttaggcaacagagcaagacccaatctccacaaaaaaa i otoGar3.GL873572 C 0 I 171 s canFam3.chr16 16061168 98 + 59632846 ---------CTTCAGAAAGCAGAAATTTTGTAGA---ATAAA-------------------------TCAATCTTAGCTACGGTGTCTTCATTTTGCCTTGAGTT---------ATTTTCACTTAAATT--------------CCACTATA--------------------------AAAGAAC i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1230821 102 + 1922530 TATGAAACAC-GCAGAAAGTAGGGATTTTGTAGAACAATAAA-------------------------TAATTTTTAACTATAGTATCTTTACTTTGCCATG---T---------AGTTTCAATTAAATC--------------CCACTTAA--------------------------AAA---- i dasNov3.JH575209 M 359 I 1 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=1714479.000000 s hg38.chrUn_KI270746v1 59726 153 + 66486 TGG-AACTCATTCTTAAAGGGTAGAATGTACATGATGTAAAGCAGACACAGGAAGATTTAT-----CTTTACT-----TACTGAGAATCAATAGTACAATTCTAAG-ATTTTTT------CCATGAAACTACTGAAATAAGTCCT-AC--TTG---AAAAAAGAA---------ATCCCACAAGAG s panTro5.chr7 156357321 154 + 166211670 TGG-AACTCATTCTTAAAGGGTAGAATGTACATGATGTAAAGCAGACACAGGAAGATTTAT-----CTTTACT-----TACTGAAAATCAACAGTACAATTCTAAG-ATTTTTTT-----CCATGAAACTACTGAAATAAGTCCT-AC--TTG---AAAAAAGAA---------ATCCCACAAGAG i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970406 154 + 162613886 TGG-AACTCATTCTTAAAGGGTAGAATGTACATGATGTAAAGCAGACACAGGAAGATTTAT-----CTTTACT-----TACTGAAAATCAACAGTACAATTCTAAG-ATTTTTTT-----CCATGAAACTACTGAAATAAGTCCT-AC--TTG---AAAAAAGAA---------ATCCCACAAGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9513 153 + 12255 TGG-AACTCATTCTTAAAGGGTAGAATGTACATGATGTAAAGCAGACACAGGAAGATTTAT-----CTTTACT-----TACTGAAAATCAATAGTACAATTCTAAG-ATTTTTT------CCATGAAACTATTGAAATAAGTCCT-AC--TTG---AAAAGAGAA---------ATCCCACAAGAG i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102844098 158 + 110113093 TGGAAACTCATTCTTAAAGGGTAGAATGTACATGATGTAAAGCAGTCACAGGAAGATTTAT-----CTTTACT-----TACTGAAAATCAACAGTACAATTCTAAG-ATTTTTTT-----CCATGAAACTACTGAAATACGTCCT-AC--TTGAAAAAAAAAAAA---------ATCCCACAAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178460750 155 + 185818997 TGG-AACTCATTCTTAAAGGGTAGAATGTACATAATGTAAAGCAGTCACAGGAAGATTTAT-----CTTTACT-----TACTGAAAATCAACAGTACAATTCTAAG-ATTTTTTT----CTCATGAAACTATTGAAATAAGTCCT-AC--TTG---AAAAAAGAA---------ATCCCACAAGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184950481 155 + 192294377 TGG-AACTCATTCTTAAAGGGTAGAATGTACATAATGTAAAGCAGTCACAGGAAGATTTAT-----CTTTACT-----TACTGAAAATCAACAGTACAATTCTAAG-ATTTTTTT----CTCATGAAACTATTGAAATAAGTCCT-AC--TTG---AAAAAAGAA---------ATCCCACAAGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7919092 155 + 15219753 TGG-AACTCATTCTTAAAGGGTAGAATGTACATAATGTAAAGCAGTCACAGGAAGATTTAT-----CTTTACT-----TACTGAAAATCAACAGTACAATTCTAAG-ATTTTTTT----CTCATGAAACTATTGAAATAAGTCCT-AC--TTG---AAAAAAGAA---------ATCCCACAAGAG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9563557 155 + 11639508 TGG-AACTCATTCTTAAAGGGTAGAATGTACATAATGTAAAGCAGTCACAGGAAGATTTAT-----CTTTACT-----TACTGAAAATCAACAGTACAATTCTAAG-ATTTTTTT----CTCATGAAACTATTGAAATAAGTCCT-AC--TTG---AAAAAAGAA---------ATCCCACAAGAG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120414813 156 + 127223203 TGG-AACTCATTCTTAAAGGGTAGAATGTACATAATGTAAAGCAGTCACAGGAAGCTTTAT-----CTTTACT-----TACTGAAAATCAACAGTACAATTCTAAGAATTTTTTT----CTCATGAAACTATTGAAGTAAGTCCT-AC--TTG---AAAAAAGAA---------ATCCCACAAGAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1541108 155 - 2854183 TGG-AACTCATTCTTAAAGGGTAGAATGTACATAATGTAAAGCAGTCACAGGAAGATTTAT-----CTTTACT-----TACTGAAAATCAACAGTACAATTCTAAG-ATTTTTTT----CTCATGAAACTATTGAAATAAGTCCT-AC--TTG---AAAAAAGAA---------ATCCCACAATAG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20248004 155 + 27496150 TGG-AACTCATTCTTAAAGGGTAGAATGTACATAATGTAAAGCAGTCACAGGAAGATTTAT-----CTTTACT-----TACTGAAAATCAACAGTACAATTCTAAG-ATTTTTTT----CTCATGAAACTACTGAAGTAAGTCCT-AC--TTG---AAAAAAGAA---------ATCCCACAAGAG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700494 152 - 128169293 TGG--ACTCATTCTTAAAGGGTAGAATTTACATTACGTAAAGCAGTCACAGGAAGATTTCT------CTTACT-----TACTGAAAATCAACAGTACAATTCTAAG-ATTTTGTT----TCCATGAAACTACTGAAATAAGTCCT-AC--TTG----AAAAAAAA---------ATCCCACAAGAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17036119 152 + 19594188 TGG--ACTCATTCTTAAAGGGTAGAATTTACATTACATAAAGCAGTCACAGGAAGATTTAT------TTTACT-----TACTGAAAATCAACAGTACAATTATAAG-ATTTTGTT----TCCATGAAACTACTGAAATAAGTCTT-AC--TTG----AAAAAAAA---------ATCCCGTAAGAG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923526 157 - 11686629 TAG--ACTCATTCTTAAAGGGTAGAATTTACATTACGTAAAGCAGTCACGGGAAGATTTAT------TTTACTTACTGTACTGAAAATCAACAGTACAATTCTAAG-ATTCTGTT----TCCATGAAACTACTGAAATAAGTCCT-AC--TTG----AAAAAAAA---------GTCCCACAAGAG i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3274081 155 - 4527795 TGG--ACTCATTCTTAAAGGGTAGAATTTACATTACGTAAAGCAGTCACAGGAAGATTTAT------TTTACT-----TACTGAAAATCAACAGTACAATTCTAAG-ATTTTGTT----TCCATGAAACTACTGAAATAAGTCCT-AC--TTG-AAAAAAAAAAA---------ATCCCACAAGAG i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5492178 161 - 12253515 TGG-AACTCATCTTTAAAAGCTAGAATATATACTAATAAGA--------AGAAAGATTTCCTCCCCTTTCAGT-----TACTGAAGATCAGTGGTACAATTCTAAG-TTATTTTTATTATCCACCAAACTATTGAAACAAGTCC-------AG---GGAAGGGAGCATGGGGGTATCCCAGAAGAG i otoGar3.GL873572 I 171 I 303 s canFam3.chr16 16061266 147 + 59632846 TGG-AACTTATCCTTAAAGGATAAAAGCCACACTAA-------AGTCATGGGAAGAACTCT-----CCTCACT-----TCCTAAAGATCAACAATACAATTCTAAG-ACTTCTTC-------ATGAAAACAATGAAGTAAGTCCT-AAGGTGG---GGGACGGGG---------GCCGCACAAAAA i canFam3.chr16 C 0 I 2 s dasNov3.JH575209 1230924 154 + 1922530 TGG-GACTCATCCAGAAAGGACAGAATCCACACTATTTAAAACAATTTCAGCAAGAGACCC-----CTTCACT-----TCTTAAATAGCAACAATATAATTCTAAA-ATGTC-------TCCATAAAACTACTGGAATAAATCTTAAC--TTG--AAAAAAAAAA---------ATGCCACAAAAG i dasNov3.JH575209 I 1 C 0 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=1098546.000000 s hg38.chrUn_KI270746v1 59879 94 + 66486 TTAGCAATTAATAAAAACACCAAAATGAGAAATTCCCCAGCATGGAAAATTCC-TGTCATAAATGTTGATGTTTATCCAGTTAAaaatatataca s panTro5.chr7 156357475 94 + 166211670 TTAGCAATTAATAAAAACATCAAAATGAGAAATTCCCCAGCATGGAAAATTCC-TGTCATAAATGTTGATGTTTATCCAGTTAAaaatatataca i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970560 94 + 162613886 TTAGCAATTAATAAAAACATCAAAATGAGAAATTCCCCAGCATGGAAAATTCC-TGTCATAAATGTTGATGTTTATCCAGTTAAaaatatataca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9666 94 + 12255 TTAGCAATTAATAAAAACACCAAAATGAGAAATTCCCCAGCATGGAAAATTCC-TGTCATAAATGTTGATGTTTATCCAGTTAAAAATATATACA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102844256 94 + 110113093 TTAGCAATTAATAAAAACATCAAAATGAGAAATTCCCCAGCATGGAAAATTCT-TGTCATAAATGTTGATGTTTATGCAGTTAAaaatatataca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178460905 94 + 185818997 TTAGCAATTAATAAAAACATCAAAATGAGAAATTTCCCAGCAAGGAAAATTCC-TGTCATAAATATTGATGTTTATGCGGTTAAAAATATACACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184950636 94 + 192294377 TTAGCAATTAATAAAAACATCAAAATGAGAAATTTCCCAGCAAGGAAAATTCC-TGTCATAAATATTGATGTTTATGCGGTTAAAAATATACACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7919247 94 + 15219753 TTAGCAATTAATAAAAACATCAAAATGAGAAATTTCCCAGCAAGGAAAATTCC-TGTCATAAATATTGATGTTTATGCGGTTAAAAATATACACA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9563712 94 + 11639508 TTAGCAATTAATAAAAACATCAAAATGAGAAATTTCCCAGCAAGGAAAATTCC-TGTCATAAATATTGATGTTTATGCGGTTAAAAATATACACA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120414969 94 + 127223203 TTAGCAATTAATAAAAACATCAAAATGAGAAATTTCCCAGCATGGAAAATTCC-TGTCATAAATGTTGATGTTTATGCGGTTAAAAATATACACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1541263 94 - 2854183 TTAGCAATTAATAAAAACATCAAAATGAGAAATTTCCCAGCAAGGAAAATTCC-TGTCATAAATATTGATGTTTATGCGGTTAAAAATATACACA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20248159 94 + 27496150 TTAGCAATTAATAAAAACATCAAGATGAGAAATTCCCTAGCATGGAAAATTCC-TGTCATAAATGTTGATGTTTATGCGGTTAAAAATATACACA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700646 95 - 128169293 TTAGCAATTAATGAAAACATCAAAATGAGAAATTCCCCAGCATGGAAAATTCCTTGTCACAAATGTTGATGTTTATGCAGTTAAAAATATACACa i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17036271 93 + 19594188 TTAGCAACTAATAAAAACATCAAAATGAG-AATTCCCCAGCATCGAAAATTCC-TGTCACAAATGTTGATGTTTTCGCAGTTAAAAATACACACA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923683 94 - 11686629 TTAGCAACTAACAAAAACATCAAAATGAGAAATTCCCCAGCATGGAAAATTCC-TGTCACAAATGTTGATGTTTATGCAGTTAAaaatacaaaca i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3274236 94 - 4527795 TTAGCAATTAATAAAAACATCAAAATGAGAAATTCCCCAGCATGGAAAATTCC-TGTCACAAATGTTGATGTTTATGCAGTTAAaaatacacaca i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16061415 93 + 59632846 GTAGCAATTAATAAAAAAGTTAAAATGAGAAA-TCACCACCATGAAAAACTCC-TTTAGTAAAATTTGAGGCTTGAGCAGTTAAAAATAGAGACA i canFam3.chr16 I 2 C 0 s dasNov3.JH575209 1231078 93 + 1922530 TTAGCAATTAACAGAAACCTCAAAATGAGAAA-TCCCCACAATGAAAACTTTC-CTTAGTAAATTTTTATGCATACGTGATTAAAAATATATACA i dasNov3.JH575209 C 0 I 404 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5492339 303 - 12253515 I a score=17555.000000 s hg38.chrUn_KI270746v1 59973 2 + 66486 at s panTro5.chr7 156357569 2 + 166211670 at i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970654 2 + 162613886 at i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9760 2 + 12255 AC i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102844350 2 + 110113093 gt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178460999 2 + 185818997 AT i rheMac8.chr3 C 0 I 2 s macFas5.chr3 184950730 2 + 192294377 AT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7919341 2 + 15219753 AT i macNem1.NW_012015910v1 C 0 I 2 s cerAty1.NW_012008583v1 9563806 2 + 11639508 AT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120415063 2 + 127223203 AT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1541357 2 - 2854183 AT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20248253 2 + 27496150 AT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700741 2 - 128169293 at i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17036364 2 + 19594188 AT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923777 2 - 11686629 at i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3274330 2 - 4527795 at i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16061508 2 + 59632846 AA i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1231171 404 + 1922530 I e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5492339 303 - 12253515 I a score=98788.000000 s hg38.chrUn_KI270746v1 59975 27 + 66486 gaataatatcaataaataaatatatta s panTro5.chr7 156357571 27 + 166211670 gaataatatcaataaataaatatatta i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970656 27 + 162613886 gaataatatcaataaataaatatatta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9762 27 + 12255 GAATAATATCAATAAATAAATGTATTA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102844352 27 + 110113093 gaataatatcaataaataaatatatta i nomLeu3.chr13 C 0 C 0 s calJac3.chr8 33700743 27 - 128169293 taataatatcaataaataaatatatta i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17036366 27 + 19594188 GAATAATATCAATAAATAAATATGTTA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923779 27 - 11686629 gaataatatcaataaataaatGCATTA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3274332 27 - 4527795 gaataatatcaataaataaatatatta i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16061510 27 + 59632846 GAATAATATCAAGAAACAACTATCTTA i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1231171 404 + 1922530 I e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5492339 303 - 12253515 I e colAng1.NW_012115154v1 20248255 0 + 27496150 C e manLeu1.NW_012102765v1 1541359 0 - 2854183 C e chlSab2.chr21 120415065 0 + 127223203 C e cerAty1.NW_012008583v1 9563808 0 + 11639508 C e macNem1.NW_012015910v1 7919343 2 + 15219753 I e rheMac8.chr3 178461001 2 + 185818997 I e macFas5.chr3 184950732 0 + 192294377 C a score=45317.000000 s hg38.chrUn_KI270746v1 60002 38 + 66486 gaaggaaataaTAGATGTTAGTTACTGTACACCC-AAAC- s panTro5.chr7 156357598 38 + 166211670 gaaggaaataaTAGATGTTAGTTACTGTATACCC-AAAA- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970683 38 + 162613886 gaaggaaataaTAGATGTTAGTTACTGTATACCC-AAAA- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9789 37 + 12255 GAAGGAAATAATAGATGTTAGTTAC-GTATACCC-AAAA- i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102844379 38 + 110113093 gaaggaaataaTAGATGTTAGTTACTGTATACCC-AAAA- i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184950732 2 + 192294377 ------------------------------------AA-- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012008583v1 9563808 2 + 11639508 ------------------------------------AA-- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120415065 2 + 127223203 ------------------------------------AA-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1541359 2 - 2854183 ------------------------------------AA-- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20248255 2 + 27496150 ------------------------------------AA-- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700770 38 - 128169293 GAAGGAAATAATAGATGCTAGTTACTGTATACCCAAAA-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17036393 37 + 19594188 GAAGGAAATAATAGATGCTAGTTACTGTATACCC-AAA-- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923806 38 - 11686629 GAAGGAAATAATAGATGCTAGTTACTGTATACCCAAAA-- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3274359 38 - 4527795 gaaggaaataaTAGATGCTAGTTACTGTATACCCAAAA-- i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16061537 38 + 59632846 GAGGGGAAAAATAAATGTTAGTTACAATATACCTAAAA-- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1231575 35 + 1922530 GAGGAGAAAAGTAAAT----ATTACTGAATGCCCCAAA-C i dasNov3.JH575209 I 404 C 0 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5492339 303 - 12253515 I e macNem1.NW_012015910v1 7919343 2 + 15219753 I e rheMac8.chr3 178461001 2 + 185818997 I a score=605046.000000 s hg38.chrUn_KI270746v1 60040 54 + 66486 CTATACTGTATTTT--AGGCTCTATATTTACTGCAGCACAGAACTAAAAGAATTTT s panTro5.chr7 156357636 54 + 166211670 CTATACTGTATTTT--AGGCTCTATATTTACTGCAGCACAGAACTAAAAGAGTTTT i panTro5.chr7 C 0 I 1 s panPan2.chr7 155970721 54 + 162613886 CTATACTGTATTTT--AGGCTCTATATTTACTGCAGCACAGAACTAAAAGAGTTTT i panPan2.chr7 C 0 I 1 s gorGor5.CYUI01009314v1 9826 53 + 12255 CTATAC-GTATTTT--AGGCTCTATATTTACTGAGGCACAGAACTAAAAGAATTTT i gorGor5.CYUI01009314v1 C 0 I 1 s nomLeu3.chr13 102844417 54 + 110113093 CTATACTGTATTTT--AGGCTCTATTTTTACTGTGGCACAAAACTAAAAGAATTTT i nomLeu3.chr13 C 0 I 1 s rheMac8.chr3 178461003 54 + 185818997 CTATACTGCATTTT--AGGCTCTATTTTTACTGTGGCACAGAACTAAAAGAATTTT i rheMac8.chr3 I 2 I 1 s macFas5.chr3 184950734 54 + 192294377 CTATACTGCATTTT--AGGCTCTATTTTTACTGTGGCACAGAACTAAAAGAATTTT i macFas5.chr3 C 0 I 1 s macNem1.NW_012015910v1 7919345 54 + 15219753 CTATACTGCATTTT--AGGCTCTATTTTTACTGTGGCACAGAACTAAAAGAATTTT i macNem1.NW_012015910v1 I 2 I 293 s cerAty1.NW_012008583v1 9563810 54 + 11639508 CTATACTGCATTTT--AGGCTCTATTTTTACTGTGGCACAGAACTAAAAGAATTTT i cerAty1.NW_012008583v1 C 0 I 1 s chlSab2.chr21 120415067 54 + 127223203 CTATACTGCATTTT--AGGCTCTATTTTTACTGTGGCACAGAACTAAAAGAATTTT i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012102765v1 1541361 54 - 2854183 CTATACTGCATTTT--AGGCTCTACTTTTACTGTGGCACAGAACTAAAAGAATTTT i manLeu1.NW_012102765v1 C 0 I 1 s colAng1.NW_012115154v1 20248257 54 + 27496150 CTATACTGCATTTT--AGGCTCTATTTTTACTGTGGCACAGAACTAAAAGAATTTT i colAng1.NW_012115154v1 C 0 I 1 s calJac3.chr8 33700808 54 - 128169293 CTATACTGCATTTT--AGGCTCTATTTTTACTGAGGCACAGAACTAAAAGAATTTT i calJac3.chr8 C 0 I 1 s saiBol1.JH378140 17036430 54 + 19594188 CTATAGTGCATTTT--AGGCTCTATTTTTACTGTGGCACAGAACTAAAAGAATTTT i saiBol1.JH378140 C 0 I 1 s cebCap1.NW_016107335v1 4923844 54 - 11686629 CTATACTGCATTTT--AGGCTCTATTTTTACTGTGGCACAGAACTAAAAGAATTTT i cebCap1.NW_016107335v1 C 0 I 1 s aotNan1.NW_018506100v1 3274397 54 - 4527795 CTATACTGCATTTT--AGGCTCTATTTTTACTGTGGCACAGAACTAAAAGAATTTT i aotNan1.NW_018506100v1 C 0 I 1 s canFam3.chr16 16061575 53 + 59632846 CTTAACTGTTTTTTTAAGGCTCTATTGTTACTGTGGCATAGAACTTAA--AATTT- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1231610 48 + 1922530 TTA----GTTTTTA--AGAGTCTATTGTTAGTCTGACATAGAACTAAAAGTTTT-- i dasNov3.JH575209 C 0 C 0 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5492339 303 - 12253515 I a score=53207.000000 s hg38.chrUn_KI270746v1 60094 8 + 66486 AAAGCTCT s panTro5.chr7 156357691 8 + 166211670 AAAGTTCT i panTro5.chr7 I 1 C 0 s panPan2.chr7 155970776 8 + 162613886 AAAGTTCT i panPan2.chr7 I 1 C 0 s gorGor5.CYUI01009314v1 9880 8 + 12255 AAAGTTCT i gorGor5.CYUI01009314v1 I 1 C 0 s nomLeu3.chr13 102844472 8 + 110113093 AAAGTTCT i nomLeu3.chr13 I 1 C 0 s rheMac8.chr3 178461058 8 + 185818997 AAAGCTCT i rheMac8.chr3 I 1 I 301 s macFas5.chr3 184950789 5 + 192294377 AAAGC--- i macFas5.chr3 I 1 C 0 s cerAty1.NW_012008583v1 9563865 8 + 11639508 AAAGCTCT i cerAty1.NW_012008583v1 I 1 C 0 s chlSab2.chr21 120415122 8 + 127223203 AAAGCTCT i chlSab2.chr21 I 1 C 0 s manLeu1.NW_012102765v1 1541416 5 - 2854183 AAAGC--- i manLeu1.NW_012102765v1 I 1 C 0 s colAng1.NW_012115154v1 20248312 8 + 27496150 AAAGCTCT i colAng1.NW_012115154v1 I 1 C 0 s calJac3.chr8 33700863 8 - 128169293 AAAGTTCT i calJac3.chr8 I 1 C 0 s saiBol1.JH378140 17036485 8 + 19594188 AAAGTTCT i saiBol1.JH378140 I 1 C 0 s cebCap1.NW_016107335v1 4923899 8 - 11686629 AAAGTTCT i cebCap1.NW_016107335v1 I 1 C 0 s aotNan1.NW_018506100v1 3274452 8 - 4527795 AAAGTTCT i aotNan1.NW_018506100v1 I 1 C 0 s canFam3.chr16 16061628 8 + 59632846 TAAGTGTT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1231658 8 + 1922530 AGAATATT i dasNov3.JH575209 C 0 C 0 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5492339 303 - 12253515 I e macNem1.NW_012015910v1 7919399 293 + 15219753 I a score=56496.000000 s hg38.chrUn_KI270746v1 60102 7 + 66486 TTCTATT s panTro5.chr7 156357699 7 + 166211670 TTCTATT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970784 7 + 162613886 TTCTATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9888 7 + 12255 TTCTATT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102844480 7 + 110113093 TTCTATT i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184950794 6 + 192294377 -TCTATT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012008583v1 9563873 3 + 11639508 ----ATT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120415130 7 + 127223203 TTCTATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1541421 6 - 2854183 -TCTATC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20248320 7 + 27496150 TTCTATT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700871 7 - 128169293 TTCTATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17036493 7 + 19594188 TTCTATG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923907 7 - 11686629 TTCTATT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3274460 7 - 4527795 TTCTATT i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16061636 7 + 59632846 TTGTATT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1231666 7 + 1922530 TTCCATT i dasNov3.JH575209 C 0 C 0 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5492339 303 - 12253515 I e macNem1.NW_012015910v1 7919399 293 + 15219753 I e rheMac8.chr3 178461066 301 + 185818997 I a score=25585.000000 s hg38.chrUn_KI270746v1 60109 2 + 66486 AG s panTro5.chr7 156357706 2 + 166211670 AG i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970791 2 + 162613886 AG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9895 2 + 12255 AG i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102844487 2 + 110113093 AG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178461367 2 + 185818997 ag i rheMac8.chr3 I 301 C 0 s macFas5.chr3 184950800 2 + 192294377 AG i macFas5.chr3 C 0 I 298 s macNem1.NW_012015910v1 7919692 2 + 15219753 ag i macNem1.NW_012015910v1 I 293 C 0 s cerAty1.NW_012008583v1 9563876 2 + 11639508 AG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120415137 2 + 127223203 AG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1541427 2 - 2854183 AG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20248327 2 + 27496150 AG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700878 2 - 128169293 AT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17036500 2 + 19594188 AG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923914 2 - 11686629 AG i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3274467 2 - 4527795 AG i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16061643 2 + 59632846 AG i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1231673 2 + 1922530 AG i dasNov3.JH575209 C 0 C 0 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5492339 303 - 12253515 I a score=911610.000000 s hg38.chrUn_KI270746v1 60111 79 + 66486 AAACTATTATC-AATAGGTTGCATCTTTATGGCCCAGCTGAGTTGAAATTCCAAATAAGATCCCTTCAAATTTAATAAAT s panTro5.chr7 156357708 79 + 166211670 AAACTATTATC-AATAGGTTGCATCTTTATGGCCCAACTGAGTTGAAATTCCAAATAAGATCACTTCAAATTTAATAAAT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970793 79 + 162613886 AAACTATTATC-AATAGGTTGCATCTTTATGGCCCAACTGAGTTGAAATTCCAAATAAGATCACTTCAAATTTAATAAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9897 79 + 12255 AAACTATTATC-AATAGGTTGCATCTTTATGGCCCAACTGAGTTGAAATTCCAAATAAGATCCCTTCAAATTTAATAAAT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102844489 79 + 110113093 AAACTATTATC-AATAGGTTGCATCTTTATGGCCCAACTGAGTTGAAATTCCAAATAAGATCACCTCAAATTTAATAAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178461369 80 + 185818997 aaaCTATTATCAAATAGGTTGCATCTTTATCGCCCAACTGAGTTGAAATTCTAAATAAGATCACTTCAAATTTAATAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184951100 80 + 192294377 aaaCTATTATCAAATAGGTTGCATCTTTATGGCCCAACTGAGTTGAAATTCTAAATAAGATCACTTCAAATTTAATAAAT i macFas5.chr3 I 298 C 0 s macNem1.NW_012015910v1 7919694 80 + 15219753 aaACTATTATCAAATAGGTTGCATCTTTATGGCCCAACTGAGTTGAAATTCTAAATAAGATCACTTCAAATTTAATAAAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9563878 80 + 11639508 AAACTATTATCAAATAGGTTGCATCTTTATGGCCCAACTGAGTTGAAATTCTAAATAAGATCACTTCAAATTTAATAAAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120415139 80 + 127223203 AAACTATTTTCAAATAGGTTGCATCTTTATGGCCCAACTGAGTTGAAATTCCAAATAAGATCACTTCAAATTTAATAAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1541429 80 - 2854183 AAACTATTATCAAATAGGTTGCATCTTTATGGCCCAACTGAGTTGAAATTCTAAATAAGATCACTTCAAATTTAATAAAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20248329 80 + 27496150 AAACTGTTATCAAATAGGTTGCATCTTTATGGCCCAACTGAGTTGAAATTCCAAGTAAGATCACTTCAAATTTAATAAAT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700880 80 - 128169293 AAACTATTATCAAATAGCTAGCATTTTTATGTCCCAATTGAGCTGAAATTCCAAATAAAATCACTTCAAATTTAATAAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17036502 80 + 19594188 AAATTATTATCAAATAGGTTGCATTTTTATGTCCCAAATGAGCTGCAATTCCAAATAAGATCACTTCAAATTTAACAAAT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923916 80 - 11686629 AAACTATTATCAAATAGGTTGCATTTTTATGTCCCAATTGAGCTGCAATTCCAAATAAGATCACTTCAAATTTAATAAAT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3274469 80 - 4527795 AAACTATTATCAAATAGGTTGCATTTTTATGTCCCAATTTAGCTGTAATTCCAAATAAGATCACTTCAAATTTAATAAAT i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16061645 80 + 59632846 AAACTATAATCAAATAGGTTGCATTTGCATGTCCCAACTAAGTTGAAATTCTGAGTAAAACTACCTTGAGTTTAAAAAAT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1231675 78 + 1922530 AAACTATAATCAAATAGTCCACATTTGCATTTCTCAACAAAGCTGCATTTTCAAATAAGATCACATCAAG-TTAATACA- i dasNov3.JH575209 C 0 C 0 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5492339 303 - 12253515 I a score=9947068.000000 s hg38.chrUn_KI270746v1 60190 753 + 66486 GGCATTCTTCATTAACAGCATTTAAAAAATAATGGCTGAAACATAT---AATCAA-CATTACACTGAAG----TTCTATCTGAAGACAGAAAAAGTTGCCATCCACACCAAAGCTACACATATACCTTCTGATTTTATAGAATTGTTCCAATAT-CTTTTC-TGTCAATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACTAGGAGAAAATTTTCTCTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTATGCAGCATGTCATGTGAAGGCAAGTCTGAAGAAGGTGTTGGTGAGGAAGACACATCTGCCTTGCTTATGTCTGCTGATAATGAAAATGATGACTCTGTCTCAGATGATAACTTTATAGATTTGCCTCCTTAGTATGAAACATCTTTCACACAACCCTCAATTGTAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAGTTCATAATCTTCTTTCTGTTCCTTTTCTCCTTGTAGCCTTTCTATAACCAACTGTTCCTCAGGACATAATGAAGTGCTTTCCTCATGTGGGGACACTAAGGTTTCTAGTGG---AAGAGTGACAGATTCAATGACAAATTTTGGAGGCCTTGATTCTTCTTTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCAGTTGCTCTTGCTGCACAGTGATCTGGTGTGTAACGACTTCAA s panTro5.chr7 156357787 753 + 166211670 GGCATTCTTCATTAACAGCATTTAAAAAATAATGGCTGAAACACAT---AATCAA-CATTACACTGAAG----TTCTATCTGAAGACAGAAAAAGTTGCCATCCACACCAAAGCTACACATACACCTTTTGATTTTATAGAATTGTTCCAATAT-CTTTTC-TGTCAATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTCTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTATGCAGCATGTCATGCGAAGGCAAGTCTGAAGAAGGTGTTGGGGAGGAAGACGCATCTGCCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTGTCTCAGATGATAACTTTATAGATTTGCTTCCTTGGTATGAAACATCTTTCACACAACCCTCAATTGTAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAGTTCAGAATTTTCTTTCTGTTCCTTTTCTCCTTGTAGCCTTTCTATAACCAACTGTTCCTCAGGACATAATGAAGTACTTTCCTCATGTGGGGACACTAAGGTTTCTAGTGG---AAGAGTGACAGATTCCATGACTAATTTTGGAGGCCTTGATTCTTCTCTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCAGTTGTTCTTGCTGCACAGTGATCTGGTGTGTAACGACTTCAA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155970872 752 + 162613886 GGCATTCTTCATTAACAGCATTT-AAAAATAATGGCTGAAACACAT---AATCAA-CATTACACTGAAG----TTCTATCTGAAGACAGAAAAAGTTGCCATCCACACCAAAGCTACACATATACCTTTTGATTTTATAGAATTGTTCCAATAT-CTTTTC-TGTCAACATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTCTTAGTAATAGCTGGTTTACCCATGCCAATCTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTATGCAGCATGTCATGCGAAGGCAAGTCTGAAGAAGGTGTTGGGGAGGAAGACGCATCTGCCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTGTCTCAGATGATAACTTTATAGATTTGCTTCCTTGGTATGAAACATCTTTCACACAACCCTCAATTGTAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAGTTCAGAATTTTCTTTCTGTTCCTTTTCTCCTTGTAGCCTTTCTGTAACCAACTGTTCCTCAGGACATAATGAAGTACTTTCCTCATGTGGGGACACTAAGGTTTCTAGTGG---AAGAGTGACAGATTCCATGACTAATTTTGGAGGCCTTGATTCTTCTCTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCAGTTGTTCTTGCTGCACAGTGATCTGGTGTGTAACGACTTCAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 9976 753 + 12255 GGCATTCTTCATTAACAGCATTTAAAAAATAATGGCTGAAACACAT---AATCAA-CATTACACTGAAG----TTCTATCTGAAGACAGAAAAAGTTGCCATCCACACCAAAACTACACATATACCTTCTGATTTTATAGAATTGTTCCAATGT-CTTTTC-TCTCAATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTCTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTATGCAGCATGTCATGTGAAGGCGAGTCTGAAGAAGGTGTTGGGGAGGAAGACACATCTGCCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTGTCTCAGATGATAACTTTATAGATTTGCCTCCTTGGTATGAAACATCTTTCAAACAACCCTCAATTTTAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAGCTCAGAATTTTCTTTATGTTCCTTTTCTCCTTGTAGCCTTTCTATAACCAACTGTTCCTCAGGACATAATGAAGTGCTTTCCTCATGTGGGGACACTAAGGTTTCTAGTGG---AAGAGTGACAGATTCAATGACTAATTTTGGAGGCCTTGATTCTTCTTTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCAGTTGCTCTTGCTGCACAGTGATCTGGTGTGTAACGACTTCAA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102844568 754 + 110113093 GACAGTCTTCATTAACAGCATTTAAAAAATAATGGCTGCAACACAT--AAATCAA-CATTACACTGAAG----TTCTATCTGAAGACAGAAAAAGTTGCCATCCACACCAAAGCTACACATATACCTTCTGATTTTATAGAATTGTTCCAGTAT-CTTTTC-TGTCGATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTCTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTATGCAGCATGTCATGCGAAGGCAAGTCTGAAGAAGGTGTTGGGGAGGAAGACACATCTGCCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTGTCTCAGATGATAACTTTATAGATTTGTCTCCTTGGTATGAAACATCTTTCACACAACCCTCAGTTGTAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAGTTCAGAATTTTCTTTCTGTTCCTTTTCTCCTTGTAGCCTTTCTATAACCAACTGTTCCTCAGGACATAATAAAGTACTTTCCTCATGTGGGGACACTAAGGTTTCTAGTGG---AAGAGTGACAGATTCAATGACTAATTTTGGAGGCCTTGATTCTTCTTTGGATACCACTATTTTAGGTTCCTCTAACAACTGCAGTTGCTCTTCCTGCACAATGATCTGGTGTGTAACCACTTCAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178461449 747 + 185818997 GACATTC----TTAACAGCATTTTTAA---AATGGCTGAAACACAT--AAGTCAA-CATTACACTGAAG----TTCTATCTGCAGACAGAAAAAGTTGCCATTCACACCAAAACTACACATATACCTTCTGATTTTATAGAATTGTTCCAATAT-CTTTTC-TGTCAATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTTTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTGTGCAGCATGTCATGCAAAGGCAAGTCTGAAGAAGGTGTTGGGGAGGAAGACACATCTGCCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTGTCTCAGATGATAACTTTATAGATTTGTCTCCTTGGTATGAAACATCTTTCACACAACTCTCAATTGTAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAGTTCAGAATTTTCTTTCTGTTCCTTTTCTCCTTGTAGTCTTTCTATAACCAACTGTTCCTCAGGACATAGTGAAATACTTCCCTCATGTGGGGACACTAAGGTTTCCAGTGG---AAGAGTGACAGATTCAATGACTAATTTTGGAGGCCCCGATTCTTCTTTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCAGTTCCTCTTGCTGCACAATGATCTGGTGTGTAACGACTTCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184951180 751 + 192294377 GACATTCTTCATTAACAGCATTTTTAA---AATGGCTGAAACACAT--AAGTCAA-CATTACACTGAAG----TTCTATCTGCAGACAGAAAAAGTTGCCATTCACACCAAAACTACACATATACCTTCTGATTTTATAGAATTGTTCCAATAT-CTTTTC-TGTCAATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTTTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTGTGCAGCATGTCATGCAAAGGCAAGTCTGAAGAAGGTGTTGGGGAGGAAGACACATCTGCCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTGTCTCAGATGATAACTTTATAGATTTGTCTCCTTGGTATGAAACATCTTTCACACAACTCTCAATTGTAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAGTTCAGAATTTTCTTTCTGTTCCTTTTCTCCTTGTAGTCTTTCTATAACCAACTGTTCCTCAGGACATAGTGAAATACTTCCCTCATGTGGGGACACTAAGGTTTCCAGTGG---AAGAGTGACAGATTCAATGACTAATTTTGGAGGCCCCGATTCTTCTTTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCAGTTCCTCTTGCTGCACAATGATCTGGTGTGTAACGACTTCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7919774 751 + 15219753 GACATTCTTCATTAACGGCATTTTTAA---AATGGCTGAAACACAT--AAGTCAA-CATTAAACTGAAG----TTCTATCTGCAGACAGAAAAAGTTGCCATTCACACCAAAACTACACATATACCTTCTGATTTTATAGAATTGTTCCAATAT-CTTTTC-TGTCAATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTTTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTGTGCAGCATGTCATGCAAAGGCAAGTCTGAAGAAGGTATTGGGGAGGAAGACACATCTGCCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTGTCTCAGATGATAACTTTATAGATTTGTCTCCTTGGTATGAAACATCTTTCACACAACTCTCAATTGTAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAGTTCAGAATTTTCTTTCTGTTCCTTTTCTCCTTGTAGTCTTTCTATAACCAACTGTTCCTCAGGACATAGTGAAATACTTCCCTCATGTGGGGACACTAAGGTTTCCAGTGG---AAGAGTGACAGATTCAATGACTAATTTTGGAGGCCCCGATTCTTCTTTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCAGTTCCTCTTGCTGCACAATGATCTGGTGTGTAACGACTTCAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9563958 755 + 11639508 GACATTCTTCATTAACAGCATTTAAAA---AATGGCTGAAACACAT--AAGTCAA-CATTACACTGAAGTTCTTTCTATCTGCAGACAGAAAAAGTTGCCATTCACACCAAAACTACACATATACCTTCTGATTTTATAGAATTGTTCCAATAT-CTTTTC-TGTCAATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAACTTTCTTTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTGTGCAGCATGTCATGCGAAGGCAAGTCTGAAGAAGGTGTTGGGGAGGAAGACACATCTGCCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTGTCTCAGATGATAACTTTATAGATTTGTCTCCTTGGTATGAAACATCTTTCACACAACTCTCAATTGTAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAGTTCAGAATTTTCTTTCTGTTCCTTTTCTCCTTGTAGTCTTTCTATAACCAACTGTTCCTCAGGACATAGTGAAATACTTCCCTCATGTGGGGACACTAAGGTTTCCAGTGG---AAGAGTGACAGATTCAATGACTAATTTTGGAGGCCCCGATTCTTCTTTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCAGTTCCTCTTGCTGCACAATGATCTGGTGTGTAACGACTTCAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120415219 751 + 127223203 GACATTCTTCATTAACAGCATTTAAAA---AATGGCTGAAACACGT--AAGTCAA-CATTACACTGAAG----TTCTATCTGAAGACAGAAAAAGTTGCCATTCACACCAAAGCTACACATATACCTTCTGATTTCATAGAATTGTTCCAATAT-CTTTTC-TGTCAATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTTTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTATGCAGCATATCATGCGAAGGCAAGTCTGAAGAAGGTGTTGGGGAGGAAGACACATCTGCCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTGTCTCAGATGATAACTTTATAGATATGTCTCCTTGGTATGAAACATCTTTCACACAACTCTCAATTGTAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAGTCCAGAATTTTCTTTCTGTTCCTTTTCTCCTTGTAGTCTTTCTATAACCAACTGTTCCTCAGGACATAGTGAAATACTTCCCTCATGTGGGGACACTAAGGTTTCCAGCGG---AAGAGTGACAGATTCAATGACTAATTTTGGAGGCCCCGATTCTTCTTTGGATACCACCGTTTTAGGTTCCTCTAACAACTGCAGTTCCTCTTGCTGCACAATCATCTGGTGTGTAACGACTTCAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1541509 751 - 2854183 GACATTCTTCATTAACAGCATTTAAAA---AATGGCTGAAACACGT--AAGTCAA-CATTACACTGAAG----TTCTATCTGCAGACAGAAAAAGTTGCCATTCACACCAAAACTACACATATACCTTCTGATTTTATAGAATTGTTCCAATAT-CTTTTC-TGTCAATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTTTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAAAGCTGAAGGGTAATTGTGCAGCATGTCATGCGAAGGCAAGTCTGAAGAAGGTGTTGGGGAGGAAGACACATCTGCCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTGTCTCAGATGATAACTTTATAGATTTGTCTCCTTGGTATGAAACATCTTTCACACAACTCTCAATTGTAGGAGTCATTTCAGAGTCCATCAATCCAGTAGGAAGTTCAGAATTTTCTTTCTGTTCCTTTTCTCCTTGTAGTCTTTCTATAACCAACTGTTTCTCAGGACATAGTGAAATACTTCCCTCATGTGGGGACACTAAGGTTTCCAGTGG---AAGAGTGACAGATTCAATGACTAATTTTGGAGGCCCCGATTCTTCTTTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCAGTTCCTCTTGCTGCACAATGATCTGGTGTGTAACGACTTCAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20248409 751 + 27496150 GACATTCTTCATTAACAGCATTTAAAA---AATGGCTGAAACACAT--AAGTCAA-CATTACACTGAAG----TTCTATCTGAAGACAGAAAAAGTTGCCATTCACACCAAAGCTACACATATACCTTCTGATTTTATAGAATTGTTCCAATAT-CTTTTC-TGTCAATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTTTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTACGCAGCATGTCATGTGAAGGCAAGTCTGAAGAAGGTGCTGGCGAGGAAGACACACCTGCCTTGCTCATGTCTGCTGATGATGAAAATGATGACTCGGTCTCAGATGATAACTGTACAGATTTGTCTCCTTGGTATGAAACATCTTTCACACAACTCTCAATTGCAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAGTTCAGAATTTTCTTTCTGTTCCTTTTCTCCTTGTAGTCTTTCTATAACCAACTGTTCCTCAGGACACAGTGAAATACTTCCCTCATGCGGGGACACTAAGGTGTCCAGTGG---AAGAGTGACAGATTCAATGACTAATTTTGGAGGCCCCGATTCTTCTTTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCAGTTCCTCTTGCTGCACAATGATCTGGTGTGTAACAACTTCAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33700960 736 - 128169293 GACATACTTCACTAACAGCATTTTTAAAATAACGGCCGAAACAGAT--AAATCAA-TATTACATTGAAG----TTCTATCTGAAAATAGAAAAAGTTGCCATCCACACAAAAGCTACACATATAACTTCTGATTTTACAGAATTATTCTAATAT-CTTTTC-TGTCAGTATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCGACCAGGAGAAAATTTTCTTTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTATGCAGCATGTCATGCGAAGGTAAGTCTGAAGAAGGTGTTGGAGAGGAAGACACATCTGTCTTGCATATGTCTGCTGATGATGCAAATGATGACTCTGTCTCAGGTAGTAACTTTACAGATTTTTCTCCTTGGTATGAACCATCTTTCACACAACTCTCAATTGCAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAATTCAGAATTTTCTTTCTGTTCCTTTTCTATTTGTAGCCTT------------------TCAGAACATAATGAAGTACTTTCCTCATGTGCGGACACTAAGGTTTCTGGTGG---AAGAATGATAGATTCAACGACTATGTTTGGAGGCCTTGATTCTTCTTTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCATTTCCTCTTCCTGCACAATGATCTGGTGTGTAACAACTTCAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17036582 736 + 19594188 GACATTCTTCACTAACAGCATTTTAAAAATAATGGCTGAAACACAT--AAATCAA-TATTACACTGAGG----TTCCATCTGAAAATAGAAAAAGTTGCCATCCACACAAAAGCAACACATATAACTTCTGATTTTATAGAATTATTCTAATAT-CTATTC-TGTCAGTATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTTTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTATGCAGCATGTCATGCGAAGGCAAGTCTGAAGAAGGTGTTGGAGAGGAAGACACATCTGTCTTGCTTATGTCTGCTGACGATGAAAATGATGACTCTGTCTCAGGTAGTAACTTTACAGATTTTTCTCCTTGGTATGAACTATCTTTCACACAACTTTCAATTGCAGGAGTCATTTCAGAGTCCATCAATCCAGTAGAAAATTCAGAATTTTCTTTCTGTTCCTTTTCTATTTGTAGTCTT------------------TCAGAATATAATGAAGTACTTTCCTCATGTGCAGACACTAAGGTTTCTGGTGG---AAGAATGATAGATTCAATGACTAAGTTTGGAGGCCTTGATTTTTCTTTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCATTTCCTCTTGCTGCACAATGATCTGGTGTGTCGTGACTTCAA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4923996 737 - 11686629 GACATTCTTCACTAACAGCATTTTTTAAATAATGGCAGAAACACAT--AAATCAATTATTACATTGACG----TTCTATCTGAAAATAGAAAAAGTTGCCATCCACACAAAAGCAACACATATAACTTCTGATTTTATAGAATTATTCTAATAT-CTTTTC-TGTCAGTATGA-CTAAAATCATCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTTTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAACTGAAGGGTAATTATGCAGTATGTCATGCGAAGGCAAGTCTGAAGAAGGTGTTGGAGAGGAAGACACATCTGTCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTATCTCAGGTAGTAACTTTATAGATTTTTCTCCTTGGTATGAACCATCTTTCACACAACTCTCAATTGCAGGAGTCATTTCAGATTCCATCAATCCAATAGAAAATTCAGAATTTTCTTTCTGTTCTTTTTCTATTTGTAGCCTT------------------TCAGAATATAATGAAGTACTTTCCTCATGTGCAGATACTAAGGTTTCTGGTGG---AAGAATGATAGATTCAATGACTAAGTTTGGAGGCCTTGATTCTTCTTTGGATACTACTGTTTTAGGTTCCTGTAACAACTGCATTTCCTCTTGCTGCACAATGATCTGGTGTGTAACGACTTCAA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3274549 736 - 4527795 GACATTCTTCACTAACAGCATTTTAAAAATAATGGCTGAAACACAT--AAATCAA-TATTACACTGAAG----TTCTATCTGACAATAGAAAAAGTTGCCATCCACACAAAAGCTACACATATAACTTCTGATTTTACAGAATTATTCTAATAT-CTTTTC-TGTCAGTATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTTTTAGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTTGGCATGATGTTTCCAGCAGAGGAACTAAGAGCTGAAGGGTAATTATGCAGCATGTCATGCGAAGGCAAGTCTGAAGAAGGTGTTGGAGAGGAAGACACATCTATCTTGCTTATGTCTGCTGATGATGAAAATGATGACTCTGTCTCAGGTAGTAACTTTATAGATTTTTCTCCTTGGTATGAACCGTCTTTCACACAACTCTCAATTGCAGGAATCATTTCAGAGGCCGTCAATCCAGTAGAAAATTCAGAATTTTCTTTCTGTTCCTTTTCTATTTGTAGCCTT------------------TCAGAACATAATGAAGTACTTTCCTCATGTGCGGACACTAAGGTTTCTGGTGG---AAGAATGATAGATTCAATGACCAAGTTTGGAGGCCTTGATTCTTCTTTGGATACCACTGTTTTAGGTTCCTCTAACAACTGCATTTCCTCTTGCTGCACAATGATCTGGTGTGTAACGACTTCAA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5492642 738 - 12253515 GACACTCCTCATTAATACCATTTTCTAAAGCATGAAGAAACCACA----AGTCAC-CATTATATCCAAG----TTCTACCTGATGACAGAGTATGCTGCTGTCCAAACAAAAGCT--------------TTATTTTCTACAGCTACTCCAGTGA-TCTTTC-TGTGGGCATCA-TGAAAATCAGCCTACCTGTTTGGACCGTGGTCTACCAGGAGAAAATTTTCTTTTGGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTATGTTGTTGGCAGGATGCTTCCAGCACAGGAACTGAGAGTGGAAGGGTAACTGTGCAGCATGTCATGTGAAGGTAAGTCTGAAGACAGTGTTGGAGAGGATGACATATTGGCCTTGCTCATGTCCACTGATGGAGAGAATGATGACTCTGTCTCAGGTGTTAATTTTATAGATTTGTCTCCTCGGCATGAACTATCTTTCACATAACCGGCAATTGCAGAAGTCATTTCAAAGTCCATAAACCCCGTAGAAAATTCACGTTTTTCTTTCTGTTCCATTTCTTCTTGTACTCTTTCCATAAGCAAATGTTCCTTAGAACATAATGAAATATTTTCCTCATGTGGGGAAACCAAGGTTTCTGGTGGAGCAACAGTAATAGATCCAATGATTAATTTTGGAGGCAGTGATTCTTCTTTAGATACTACTATTTTTGCTTCCTCT---AACTGCAGCTCCTCCTGTGGCACAATGATCTGGTGTGTGATGACCTCAA i otoGar3.GL873572 I 303 C 0 s canFam3.chr16 16061725 736 + 59632846 --TAGTCTTCATTA----CAGTTTATATATATAGGCCAAAACATTT--TGGTCAA-TATTACATCTA-G----TTCTACCTGAAAATAGGAAAAATTAGCCTCCAAACCAAAGTTCCATATACACCTT---ATTTTATATAATTGCTCCAAAAGATTTTTC-TGTCCATATCA-TTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTTTTGGTAATAGCTGGTTTACCCATGCCGATTTTTGGAGTGACTGAGATATATGTTGTTGGCATAATGTTTCCAACAGAAGCACTGAGGGTTGAAGGGTAAGTGTGCAGTATATCCTGGGAAGGCAAGTCTGAAGAAA------GAGAGGAAGACACATTTGCCTTGCTTATGTCTGCAGCTGACACAAATGACAACTCTGTCTCAGATGGTAGTTTTACAGGTTTGTCTTCTCGGCATAAACCATCTTTCACACAATTCTCAACTGCAGGAGCCATTCCAAAGTCCGTAAATGCAGTGGAAGATTCAGAACCTGTTTTCTGTTCCATTTCTTCTTGTACCCTTTCTATAACCAACTGTTCCTTAGAACATAAAGAAGTACTTTGCTCACACGGGGACACCACAGTGTCCGGTGG---AACAATGGCAGATTCAGTGGCTGATTTTGGAGGCCGAGATTCTTCTATGGATGCCAGCATTTTGGATTCCTCT---AACTGCAGATCCTCGTGCGGCACAATGATCTGGTGTGTACGGACTTCAA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1231753 750 + 1922530 GTAATTCTTCATTAACAGCATTTTAAAA--AATGGCCAAAACACATTTAAGTCAA-CATTACATTTAAA----TTCTACCTGAGGAAAGAAAAACTTCCCCTCCAAACCAAAGGTACATATACTCCTT---ATTTTATATAATTGTTCCGACAT-CTATTCTTGTCAACATCATTTAAAATCACCCTACCTGTTTGGACCGAGGTCTACCAGGAGAAAATTTTCTTTTGGTAATAGCTGGTTTACCCATGCCAATTTTTGGAGTGACTGAGATGTAAGTTGTAGGCATGATGTTTCCAGCAGAAGAACTGAGAGTTGAAGGGTAACTATGCAGCATGTCATGAGAAGGCAAGTCTGACAAAAGTGTTGGAGAGGAAGACACATTTGCCTTGGTTATGTCTGCTGCTGGTGAAAATAGTGACTCTATCTCAGATGGTAATTTTATAGATTTGTCCCCTTGGCATGAACTACCTTTCATACAGCTTTCAATTGCAGGAGTCATTTCAAATTCCACAAACCTAGCAGAAGATTCAGCATTTTCTTTCTGTTTCATTTCCTCTTGTACCTCTTCTACCGTCAACTTTTCCTCAGAACATAAAGAAGCATTTTCCTCATATGAGGACCTTAAGGTTTCTGGAAA---ACTAAAAACAGATTCAATGGTTAATTTTTGAGGCCTTGATTCTTCTGCTGATACCGCCATTTTAGGTTCCTCT---AATTGTAGTTCTTCCTGTTGCACAATGATCTGGTGTGTAATGACTTCAA i dasNov3.JH575209 C 0 I 1077 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=2568907.000000 s hg38.chrUn_KI270746v1 60943 227 + 66486 TGTTTTCTGTCACTTCCATTTTATCTTCAATTTGATCTTCGCCACAAATATGCTTCACTTCAGAAGACATTTTCATTTCTTCACTATCAGTCTCATTAGAAATCTGTTTTTCCAATTCGGTATTCACTGTATGTTGGGATGATATTACAAAATTCAGAACATTTGTTATGGTAATGTACAAACAAATT-TTAAATTTTCTAACTATAGATATATA-----------------------------------------------------AAACATTTGGCTA s panTro5.chr7 156358540 227 + 166211670 TGTTTTCTGTCACTTCCATTTTATCTTCAATTTGATCTTCGCCACAAATATGCTTCACTTCAGAAGACATTTTCAGGTCTTCACTATCAACTTCATTAGAAATCTGTTTTTCCAATTCAGTATTCACTGTATGTTGGGATGATACTACAAAATTCAGAACATTTGTTATGGCAATGTACAAACAAATT-TTAAATTTTCTAACTATAGATACATA-----------------------------------------------------AAACATTTGGCTA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155971624 227 + 162613886 TGTTTTCTGTCACTTCCATTTTATCTTCAATTTGATCTTCGCCACAAATATGCTTCACTTCAGAAGACATTTGCAGGTCTTCACTATCAACTTCATTAGAAATCTGTTTTTCCAATTCAGTATTCACTGTATGTTGGGATGATACTACAAAATTCAGAACATTTGTTATGGCAATGTACAAACAAATT-TTAAATTTTCTAACTATAGATACATA-----------------------------------------------------AAACATTTGGCTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 10729 227 + 12255 TGTTTTCTGTCACTTCCATTTTATCTTCAATTTGATCTTCACCACAAATATGCTTCACTTCAGAAGACATTTTCATTTCTTCACTATCAACCTCATTAGAAATCTGTTTTTCCAATTCGGTATTCACTGTATGTTGGGATGATACTACAAAATTCAGAACATTTGTTATGGTAAGGTACAAACAAATT-TTAAATTTTCTAACTATAGATATATA-----------------------------------------------------AAACATTTGGCTA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102845322 227 + 110113093 TGTTTTCTGTCACTTCCATTTTATCTTCAATTTGATCTTCACCACAAATATGCTTCACTTCAGAAGACATTTTCATTTCTTCACTATTAACTTCATTAGAAATCTGTTTTTCCAATTCAGTATTCACTGTGTGTTGGGATGATACTACAAAATTCAGATCATTTATTATGGTAATGTACAAACAAACT-TTAAATTTTCTAACTATAGATATATA-----------------------------------------------------AAACATTTGGCTA i nomLeu3.chr13 C 0 I 290 s rheMac8.chr3 178462196 223 + 185818997 TGTTTTCTGTCACTTCCATTTTATCTTCCATTTGATCTTCGCCACAAATATGCTTCACTTCAGAAGACGTTTTCATTTCTTCACTATCAACTTCATTAGAAATCTGTTTTTCCAATTCGGTATTCATTTTATGTTGGGATGATACTACAAAATTCAGAACATTTGTTACGGTAATGT----ACAAATT-TTAAATTTTCTAACTATAGATATATA-----------------------------------------------------AAACATTTTGCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184951931 223 + 192294377 TGTTTTCTGTCACTTCCATTTTATCTTCCATTTGATCTTCGCCACAAATATGCTTCACTTCAGAAGACGTTTTCATTTCTTCCCTATCAACTTCATTAGAAATCTGTTTTTCCAATTCGGTATTCATTTTATGTTGGGATGATACTACAAAATTCAGAACATTTGTTACAGTAATGT----ACAAATT-TTAAATTTTCTAACTATAGATATATA-----------------------------------------------------AAACATTTTGCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7920525 223 + 15219753 TGTTTTCTGTCACTTCCATTTTATCTTCCATTTGATCTTCGCCACAAATATGCTTCACTTCAGAAGACGTTTTCATTTCTTCACTATCAACTTCATTAGAAATCTGTTTTTCCAATTCGGTATTCATTTTATGTTGGGATGATACTACAAAATTCAGAACATTTGTTATGGTAATGT----ACAAATT-TTAAATTTTCTAACTATAGATATATA-----------------------------------------------------AAACATTTTGCTA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9564713 223 + 11639508 TGTTTTCTGTCACTTCCATTTTATCTTCCATTTGATCTTCGCCACAAATATGCTTCACTTCAGAAGACATTTTCATTTCTTCACTATCAACTTCATTAGAAATCTGTTTTTCCAATTCGGTATTCATTTTATGTTGGGATGATACTACAAAATTCAGAACATTTGTTATGGTAATGT----ACAAATT-TTAAATTTTCTAACTATAGATATATA-----------------------------------------------------AAACATTTTGCTA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120415970 223 + 127223203 TGTTTTCTGTCACTTCCATGTTATCTTCCATTTGATCTTCGCCACAAATATGCTTCACTTCAGAAGACGTTTTCATTTCTTCACTATCAACTTCATTAGAAATCTGTTTTTCCAATTCGGTATTCATTTTATGTTGGGATGATACTACAAAATTCAGAACATTTGTTATGGTAATGT----ACAAATT-TTAAATTTTCTAACTATAGATATATA-----------------------------------------------------AAACATTTTGCTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1542260 223 - 2854183 TGTTTTCTGTCACTTCCATTTTATCTTCCATTTGATCTTCGCCACAAATATGCTTCACTTCAGAAGACGTTTTCATTTCTTCACTATCAACTTCATTAGAAATCTGTTTTTCCAATTCGGTATTCATTTTATGTTGGGATGATACTACAAAATTCAGAACATTTGTTATGGTAATGT----ACAAATT-TTAAATTTTCTAACTATAGATATATA-----------------------------------------------------AAACATTTTGCTA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20249160 223 + 27496150 TGTTTTCCGTCACTTCCATTTTATCTTCCATTTGATCTTCGCCACAAATACGCCTCACTCCAGAAGACGTTTTCATTTCTTCACTATCAACTTCATTAGAAATCTGTTTTTCCAATTCGGTATTCATTTTATGTTGGGATGATACTACAAAATTCAGAACATTTGTTATAGTAATGT----ACAAATT-TTAAATTTTCTAACTATAGATATATA-----------------------------------------------------AAACATTTGGCTA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33701696 227 - 128169293 TATTTTCTGTCACTTCCATTTTATCTTCAATTCGATCCTCACCACAAATAGGCTTCACTTCAGAAGACATTTTCATTTCTTCACTACCTACTTCATTAGAAATCTCTTTTTCCAATTCAGTATTTATTTTATGTTGGAATGATCCTACAAAATTCAGaatatttattatagtaatgtatatacaaatt-ttaaattttctaaatatagatatata-----------------------------------------------------aaaCATTTAGTTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17037318 227 + 19594188 TATTTTCTGTCACTTCCATTTTATCTTCAATTTGATCCTCACCACGAATAGGCTTCACTTCAGAAGACATTTTCATTTCTTCACTATCAACTTCATTAGAAATCTCTTTTTCCAATTCAGTATTTATTTTATGTTGGAATGATCCTACAAAATTCAGAATATTTATTATGGTAATGTACATATGAATT-TTAAATTTTGTAACTATACATATATA-----------------------------------------------------AAACATTTGGTTA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4924733 227 - 11686629 TATTTTCTGTCACTTCCATTTTAGCTTCAATTTGATCCTCACCACAAATAGGCTTCACTTCAGAAGACACTTTCATTTTTTCACTATCAACTTCATTAGAAATCTCTTTTTCCAATTCAGTATTTATTTTATGTTGGAATGATCCTACAAAATTCAGAATATTTATTATGGTAATGTACATATAAATT-TTAAATTTTCTAACTATACATATATA-----------------------------------------------------AAACATTTGGTTA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3275285 226 - 4527795 TATTTTCTGTCACTTCCATTTTATCTTCAATTTGATCCTCACCACAAATAGACTTCATTTCAGAAGACATTTTCATTTCTTCACTATCAACTTCATTAGAAATCTCTTTTTCCAATTCAGTATTTATTTTATGTTGGAATGATCCTACGAAATTCAGAATATTTATTATGGTAATGTACATACAAA-T-TTAAATTTTCTAACTATAGATACATA-----------------------------------------------------AAACATTTGGTTA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5493380 221 - 12253515 TGTTTTCTGTCACTTCCATTTTGTCTTCATTCTGATCTTCAGCACAAGTATGCATCACTTTAGAAGACATTTCCATTTTTTCACTATTAATTTCATGAGAACTCTGCTTTTCCAAATCAGAATTTATTTTCTTTATGGATGATTCTATAAAATTTAGAATAT---TTATGTCAATGTATATATACATTAAAAAAAAATTTAACT----AGGTATA-----------------------------------------------------AGAAATTTGGTAA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16062461 277 + 59632846 TGTTTTCTGTCACTTCCATTTTGTTTTCATTTTGA---TCGTCAAAAATATGCATCACTTTAGAAGACATTTCCATTTTTTCACTATCAACTTCATGAGAAATCTGATTTTCCACTTCAGGGTTCATTTTATCTTGCGATGATTCTACAAAATTTGGaatatttgttatattaatgtatttataaatt-taaatttttCTGGCTTAAAAATAATAGGCTTGGGCAGGAAAGGGGATAGAAGGGAGAAAAGGGATTTCCACACTTATGGAAACTTATGGTTA i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1232503 1077 + 1922530 I e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=73086.000000 s hg38.chrUn_KI270746v1 61170 9 + 66486 CACTAGAAC s panTro5.chr7 156358767 9 + 166211670 CACTAGAAC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155971851 9 + 162613886 CACTAGAAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 10956 9 + 12255 CACTAGAAC i gorGor5.CYUI01009314v1 C 0 C 0 s rheMac8.chr3 178462419 9 + 185818997 CACTAGAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952154 9 + 192294377 CACTAGAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7920748 9 + 15219753 CACTAGAAC i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9564936 9 + 11639508 CACTAGAAC i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416193 9 + 127223203 CACTAGAAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1542483 9 - 2854183 CACTAGAAC i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20249383 9 + 27496150 CACTGGAAC i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33701923 9 - 128169293 AACTATAAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17037545 9 + 19594188 AACTATAAC i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4924960 9 - 11686629 AACTATAAC i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3275511 9 - 4527795 AACTATAAC i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5493601 9 - 12253515 AATCATGAC i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16062738 9 + 59632846 TACCCTGAC i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1232503 1077 + 1922530 I e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e nomLeu3.chr13 102845549 290 + 110113093 I a score=355426.000000 s hg38.chrUn_KI270746v1 61179 34 + 66486 TTAAATCAGAAGGTATTCAT----------CAAAGCAGACAATT---- s panTro5.chr7 156358776 34 + 166211670 TTAAATCAGAAGGTATTCAT----------CAAAGCAGACAATT---- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155971860 34 + 162613886 TTAAATCAGAAGGTATTCAT----------CAAAGCAGACAATT---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 10965 34 + 12255 TTAAATCAGAAGGTATTCAT----------CAAAGCAGACAATT---- i gorGor5.CYUI01009314v1 C 0 C 0 s rheMac8.chr3 178462428 34 + 185818997 TTAAATCAGAAGGTATTCAT----------CAAAGCAGGCAATT---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952163 34 + 192294377 TTAAATCAGAAGGTATTCAT----------CAAAGCAGGCAATT---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7920757 34 + 15219753 TTAAATCAGAAGGTATTCAT----------CAAAGCAGGCAATT---- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9564945 33 + 11639508 TTAAATCAGAA-GTATTCAT----------CAAAGCAGGCAATT---- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416202 34 + 127223203 TTAAATTAGAAGGTATTCAT----------CAAAGCAGGCAATT---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1542492 33 - 2854183 TTAAATCAGAA-GTATTCAT----------CAAAACAGGCAATT---- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20249392 34 + 27496150 TTAAATCAGAAGGTATTCAT----------CAAAGCAGGCAATT---- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33701932 34 - 128169293 TTAAATCAAAAGTTATTCAT----------CAAAGCAGGCAATT---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17037554 34 + 19594188 TTAAATCAGAAGTTATTCAT----------CAAAGCAGGCAATT---- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4924969 34 - 11686629 TTAAATCAGAAGTTATTCAT----------CAAAGCAGGCAATT---- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3275520 34 - 4527795 TTAAATCAGAAGTTATTCAC----------CAAGGCAGGCAATT---- i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5493610 44 - 12253515 TTAAATCAGAAGATATTCATTTAGAGATACTGAGATATTCATTT---- i otoGar3.GL873572 C 0 I 8 s canFam3.chr16 16062747 34 + 59632846 TAAAATCAGAAGGTATTTAT----------CAAGGAAAACAATT---- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1233580 32 + 1922530 TTAAACCAGAAAATATTCCT----------CAAG------AATTCCTC i dasNov3.JH575209 I 1077 C 0 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e nomLeu3.chr13 102845549 290 + 110113093 I a score=774581.000000 s hg38.chrUn_KI270746v1 61213 79 + 66486 ATTA-----AGTGAATGAAAGCCAAAGTAC----------ACAAGGATTTATGGATTAGAATCAGC--------------CACACACCAGAAAACCTAATGAAAAC---AT s panTro5.chr7 156358810 82 + 166211670 ATTA-----AGTGAATGAAAGCCAAAGTAC----------ACAAGGATTTATGGATTAGAATCAGC--------------CACACACCAGAAAACCTAATGAAAACATTAT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155971894 82 + 162613886 ATTA-----AGTGAATGAAAGCCAAAGTAC----------ACAAGGATTTATGGATTAGAATCAGC--------------CACACACCAGAAAACCTAATGAAAACATTAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 10999 79 + 12255 ATTA-----AGTGAATGAAAGCCAAAGTAT----------ACAAGGATTTATGGATTAGAATTAGC--------------CACACACCAGAAAACCTAATGAAAAC---AT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102845839 82 + 110113093 ATTA-----AGTGAATGAAAGCCAAAGTAC----------ACAAGGATTTATGGATTAGAATCAGC--------------CACACACCAGAAAACCTAATGAAAACATTAT i nomLeu3.chr13 I 290 C 0 s rheMac8.chr3 178462462 71 + 185818997 ATTA-----AGTGAATGAAAGCCAAAGTAC----------ACAAGGATTTATGGATTAGAATCAGC--------------CCCACAC-----------ATGAAAACATGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952197 71 + 192294377 ATTA-----AGTGAATGAAAGCCAAAGTAC----------ACAAGGATTTATGGATTAGAATCAGC--------------CCCACAC-----------ATGAAAACATGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7920791 71 + 15219753 ATTA-----AGTGAATGAAAGCCAAAGTAC----------ACAAGGATTTATGGATTAGAATCAGT--------------CCCACAC-----------ATGAAAACATGAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9564978 71 + 11639508 ATTA-----AGTGAATGAACGTCAAAGTAC----------ACAAGGATTTATGGATTAGAATCAGC--------------CCCACAC-----------ATGAAAACGTGAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416236 71 + 127223203 ATTA-----AGTGAATGAAAGCCAAAGTAC----------ACAAGGATTTATGGATTAGAATCAGC--------------CCCACTC-----------ACGAAAACATGAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1542525 71 - 2854183 ATTA-----AGTGAATGAAAGTCAAAGTAC----------ACAAGGATTTATGGATTAGAATCAGC--------------CACACAC-----------ACGAAAACATGAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20249426 71 + 27496150 ATTA-----AGTGAATGAAAGCCAAAGTAC----------ACAAGGATTTATGGATTAGAATCAGC--------------CCCACAC-----------ATGAAAACATGAT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33701966 82 - 128169293 ATTA-----AGTTAATGAAAACCAAAGTAC----------ATGACGATCTATGGATGAGAATCAGC--------------CACACACCATAAAACCTAATGAAAACATGAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17037588 82 + 19594188 ATTA-----AGTTAATGAAAGCCAAAGTAC----------ATGAAGATCTATGGATGAGAATCAGC--------------CACACACCATAAAACCTAATGAAAACATGAT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925003 82 - 11686629 ATTA-----AGTTAATGAAAGCCAAAGTAC----------ACGAGGATCTATGGATGAGAATCAGC--------------CACACACCATAAAACCTAATGAAAACATGAT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3275554 92 - 4527795 ATTC-----AGTTAATGAAAACCAAAGTACATGAGGATCTATGAGGATCTATGGATGAGAATCAGC--------------CACACACCATAAAACCTAATGAAAACATGAT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5493662 85 - 12253515 ATTAACTATAGTTAACAAAAACTGAAATGC----------ACAATGATTTATGGATGAGAATCAA----------------ACCAACCATAAAATCTCATGAAAATATGAT i otoGar3.GL873572 I 8 I 16 s canFam3.chr16 16062781 74 + 59632846 ATTA-----TGATAATAAAGGCCAAAATAC----------ACCAGGACTTATGAATTA-CATCAG--------------------GCCAGAAAAGCT-ACAAAAACATCAC i canFam3.chr16 C 0 I 56 s dasNov3.JH575209 1233612 93 + 1922530 ATTA-----AGCTAATTAAGGCCAAAATAT----------ACAAGGGTTTATGGATTAGAATCTCCCTTATGTATTTCTACACAGATCAAAAAACATTATGAAATGAT--- i dasNov3.JH575209 C 0 C 0 e eulFla1.LGHW01002455v1 96403 2295 - 882459 I e eulMac1.LGHX01002433v1 95296 2293 - 871265 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=18380.000000 s hg38.chrUn_KI270746v1 61292 1 + 66486 G s panTro5.chr7 156358892 1 + 166211670 G i panTro5.chr7 C 0 C 0 s panPan2.chr7 155971976 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11078 1 + 12255 G i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102845921 1 + 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178462533 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952268 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7920862 1 + 15219753 G i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9565049 1 + 11639508 G i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416307 1 + 127223203 G i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1542596 1 - 2854183 G i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20249497 1 + 27496150 G i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33702048 1 - 128169293 G i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17037670 1 + 19594188 G i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925085 1 - 11686629 G i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3275646 1 - 4527795 G i aotNan1.NW_018506100v1 C 0 C 0 s eulMac1.LGHX01002433v1 97589 1 - 871265 G i eulMac1.LGHX01002433v1 I 2293 N 0 s eulFla1.LGHW01002455v1 98698 1 - 882459 G i eulFla1.LGHW01002455v1 I 2295 N 0 s otoGar3.GL873572 5493763 1 - 12253515 G i otoGar3.GL873572 I 16 C 0 s canFam3.chr16 16062911 1 + 59632846 A i canFam3.chr16 I 56 C 0 s dasNov3.JH575209 1233705 1 + 1922530 G i dasNov3.JH575209 C 0 I 75 e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=1328819.000000 s hg38.chrUn_KI270746v1 61293 113 + 66486 TTTTACAA-------------------CACAAGT-----------------------------ACTTCCAAATGGATTGAAAATTACACAGGAAAAGTTCTCATACTCATTTTTTAGTTAAGAAAATGAGGATCAATCATG----TTATGTGAGGTACCTAAGTT s panTro5.chr7 156358893 113 + 166211670 TTTTACAA-------------------CTTAAGG-----------------------------ACTTCCAAATGGATTGAAAATTACACAGGAAAAGTTCTCATACTCATTTTTTAGTTAAGAAAATGAGTATCAATCATG----TTATGTGAGGTACCTAAGTT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155971977 113 + 162613886 TTTTACAA-------------------CTTAAGG-----------------------------ACTTCCAAATGGATTGAAAATtacacaggaaaagttctcatactcattttttagttaagaaaatgaggatcaatcatg----ttatgtgaggtacctaagTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11079 113 + 12255 TTTTATAA-------------------CTTAAGT-----------------------------ACTTCCAAATGGATTGAAAATTACACAGGAAAAGTTCTCATACTCATTTTTTAGTTAAGAAAATGAGGATCAATCATG----TTATGTGAGGTACCTAAGTT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102845922 113 + 110113093 TTTTACAA-------------------CTTAAGT-----------------------------ACTTCCAAATGGATTGAAAATtacacaggaaaagttctcatactcattttttagttaagaaaatgaggatcaatcatg----ttatgtgaggtacctaagTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178462534 113 + 185818997 TTTTACAA-------------------TTTAAGT-----------------------------ACTTCCAAAAGGACTGAAAATTATACAGGAAAAGTTCTCATACTCATTTTTTAGTTAAGAAAATGAGGATCAATCATG----TTATGTGAGATACCTAAGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952269 113 + 192294377 TTTTACAA-------------------TTTAAGT-----------------------------ACTTCCAAAAGGACTGAAAATTATACAGGAAAAGTTCTCATACTCATTTTTTAGTTAAGAAAATGAGGATCAATCATG----TTATGTGAGATACCTAAGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7920863 113 + 15219753 TTTTACAA-------------------TTTAAGT-----------------------------ACTTCCAAAAGGACTGAAAATTATACAGGAAAAGTTCTCATACTCATTTTTTAGTTAAGAAAATGAGGATCAATCATG----TTATGTGAGATACCTAAGTT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9565050 113 + 11639508 TTTTACAA-------------------TTTAAGT-----------------------------ACTTCCAAAAGGACTGAAAATTATACAGGAAAAGTTCTCATGCTCATTTTTTAGTTAAGAAAATGAGGATCAATCATG----TTATGTGAGATACCTAAGTT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416308 113 + 127223203 TTTTGCAA-------------------TTTAAGT-----------------------------ACTTCCAAATGGACTGAAAATTATACAGGAAAAGTTCTCATACTCATTTTTTAGTTAAGAAAATGAGGATCAATCATG----TTATGTGAGATACCTAAGTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1542597 113 - 2854183 TTTTACAA-------------------TTTAAGT-----------------------------ACTTCCAAAAGGACTGAAAATTATACAGGAAAAGTTCTCATACTCATTTTTTAGTTAAGAAAATGAGGATCAATCATG----TTATGTGAGATACCTAAGTT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20249498 113 + 27496150 TTTTACAA-------------------TTTAACT-----------------------------ACTTCCAACTGGACAGAAAATTATACAGGAAAAGTTCTCATACTCATTTTTTAGTTAAGAAAATGAGGATCAATCATG----TTATGCGAGGTACCTAAGTT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33702049 113 - 128169293 TTTTACAA-------------------TTTAACT-----------------------------ACTTCCAAATGGATTGAAAATTATACAGGAAAAGTTCTCGTACTCATTTTTTAGTTAAGAAAATAAGGATCAATCACA----TTATGTGCGGGGCCCAAGTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17037671 113 + 19594188 TTTTACAA-------------------TTTAAGT-----------------------------ACTTCTAAATGGATTGAAAATtatacaggaaaagttctcatactcattttttagttaagaaaatgaggatcaatcaca----ttatgtgaagtgcccaagtt i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925086 113 - 11686629 TTTTATAA-------------------TTTAAGT-----------------------------ACTTCCAAATGGATTAAAAATtatacaggaaaagttctcatactcattttttagttaagaaaatgaggatcaatcaca----ttatgtgaggtgcccaagtt i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3275647 113 - 4527795 TTTTACAA-------------------TTTAAGT-----------------------------ACTTCCAAATGGATTGAAAATTATACAGGAAAAGTTCTCGTACTCATTTCTTAGTTAACAAAATGAGGATCAATCACA----TTATGTGAGGTGCCCAAGTT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5493764 109 - 12253515 TTTTACAA-------------------TGTAAGA-----------------------------AGTTACAAACTGACTGAAAATTATATGGGTAAAGTTATAATAC----TTTATGGCTAAGAAAATGGGGATAAGTGATG----GTATGTGAGCTGCTCAAGTT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16062912 139 + 59632846 ATTTCTAA-------------------TATAATTCTATTTAACTTATATGATTACAATCGAACATTTACAAAAAGATTTACAATTTTGTAGGTCAAGTT---ATACTCTTTCAACAGCTAGAAAAATGAGGCTCAGTGATC----TTGTACAAGGTTTCCAAGTT i canFam3.chr16 C 0 I 203 s dasNov3.JH575209 1233781 136 + 1922530 ttttataaatatataatgttttatatttttgcat-----------------------------acttagaaaagtactgaaaattacatagatcaagccttcatccttattttataactagaaaaataaggctcagagaTGATATTTATGTAAGGTGTTTAGGTT i dasNov3.JH575209 I 75 C 0 e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=3416248.000000 s hg38.chrUn_KI270746v1 61406 301 + 66486 A-------AAAAGTAAAGACTGATCT---AGAATGTGTAGGCATTTTCTAATAGTAGATACCCAG-ATGCGACAAAGTTACTATAGACTCAA---A---------AGCACA-GACAGAAAAGATTTGCTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTAGCCAAAATATTCTTT-----GGATATAATCGTTG-TTCTTCA-TCATTGTCTGT-AAATTAAAA-GACTAATCTCAGGAAATCTATAA----ACTTAGATATCAG-AAACAT----AGTCA----CTGGTAAATTTTAAATCAGGATACCAGTATGTT-AAACCTTTAACTCAATCT s panTro5.chr7 156359006 301 + 166211670 A-------AAAAGTAAAGACTGATCT---AGAATGTGTAGGCATTTTCTAATAGTAGATACCCAG-ATGTAACAAAGTTACTATAGACTCAA---A---------AGCACA-GACAGAAAAGATTTACTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTACCCAAAATATTCTTT-----GGATATAATCCTTG-TTCTTCA-TCACTGTCTAT-AAATTAAAA-GACTAATCTCAGGAAATCTATAA----ACTTAGATATCAG-AAACAT----AGTCA----CTGGTAAATTTTAAATCAGGATACCAGTATGTT-AAACCTTTAATTCAATCT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972090 301 + 162613886 A-------AAAAGTAAAGACTGATCT---AGAATGTGTAGGCATTTTCTAATAGTAGATACCCAG-ATGTAACAAAGTTACTATAGACTCAA---A---------AGCACA-GACAGAAAAGATTTACTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTACCCAAAATATTCTTT-----GGATATAATCCTTG-TTCTTCA-TCACTGTCTAT-AAATTAAAA-GACTAATCTCAGGAAATCTATAA----ACTTAGATATCAG-AAACAT----AGTCA----CTGGTAAATTTTAAATCAGGATACCAGTATGTT-AAACCTTTAATTCAATCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11192 301 + 12255 A-------AAAAGTAAAGACTGATCT---AGAATGTGTAGGCATTTTCTAATAGTAGATACCCAG-ATGTAACAAAGTTACTATAGACTCAA---A---------AGCACA-GACAGAAAAGATTTGCTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTAGCCAAAATATTCTTT-----GGATATAATCCTTG-CTCTTCA-TCATTGTCTAT-AAATTAAAA-GACTAATCTCAGAAAATCTATAA----ACTTAGATATCAG-AAACAT----AGTCA----CTGGTAAATTTTAAATCAGGATACCAGTATGTT-AAACCTTTAACTCAATCT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102846035 301 + 110113093 A-------AAAAGTAAAGACTGACCT---AGAATGTGTAGGCATTTTCTAACAGTAGATACCCAG-TTGTAACAAAGTTACTATAGACTCAA---A---------AGAACA-GACAGAAAAGATTTACTAACCGCCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTACCCAAAATATTCTTT-----GGATATAATCCTTG-TTCTTCA-TCATTGTCTAT-AAATTAAAA-GACTAATCTCAGGAAATCTATAA----ACTTAGATATCAG-AAATAT----AGTCA----CTGGTAAATTTTAAATCAGGATATCAGTATGTT-AAATCTTTAACTCAATCT i nomLeu3.chr13 C 0 I 296 s rheMac8.chr3 178462647 304 + 185818997 A-------AAAAGTAAAGACTGACCT---AGAATGTGAAGGCATTTTCTAATAGCAGATACCCAG-ATGTAACAAAGTTACTATAGACTCAA---A---------AGCACA-GACAGAAAAGATTTACTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTACCCAAAACATTCTTT-----GGATATAATCCTTG-CTCCTCA-TCA--GTCTAT-AACTTAAAA-GACTAATCTTAGGAAATCTATAA----ACTTAGATATCAGAAAATAC----AGTCACTGGCTGGTAAATTTTAAATGAGGATACCAGCATGTT-AAACCTTTAAGTCAATCT i rheMac8.chr3 C 0 I 90 s macFas5.chr3 184952382 304 + 192294377 A-------AAAAGTAAAGACTGACCT---AGAATGTGAAGGCATTTTCTAATAGCAGATACCCAG-ATGTAACAAAGTTACTATAGACTCAA---A---------AGCACA-GACAGAAAAGATTTACTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTACCCAAAACATTCTTT-----GGATATAATCCTTG-TTCCTCA-TCA--GTCTAT-AACTTAAAA-GACTAATCTTAGGAAATCTATAA----ACTTAGATATCAGAAAATAC----AGTCACTGGCTGGTAAATTTTAAATGAGGATACCAGCATGTT-AAACCTTTAAGTCAATCT i macFas5.chr3 C 0 I 90 s macNem1.NW_012015910v1 7920976 304 + 15219753 A-------AAAAGTAAAGACTGACCT---AGAATGTGAAGGCATTTTCTAATAGCAGATACCCAG-ATGTAACAAAGTTACTATAGACTCAA---A---------AGCACA-GACAGAAAAGATTTACTATCCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTACCCAAAACATTCTTT-----GGATATAATCCTTG-TTCCTCA-TCA--GTCTAT-AACTTAAAA-GACTAATCTTAGGAAATCTATAA----ACTTAGATATCAGAAAATAC----AGTCACTGGCTGGTAAATTTTAAATGAGGATACCAGCATGTT-AAACCTTTAAGTCAATCT i macNem1.NW_012015910v1 C 0 I 90 s cerAty1.NW_012008583v1 9565163 304 + 11639508 A-------AAAAGTAAAGACTGACCT---AGAATGTGAAGGCATTTTCTAATAGCAGATACCCAG-ATGTAACAAAGTTACTATAGACTCAA---A---------AGCACA-GACAGAAAAGATTTACTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTACCCAAAACATTATTT-----GGATATAATCCTTG-TTCTTCA-TCA--GTCTAT-AACTTAAAA-GACTAATCTTAGGAAATCTATAA----ACTTAGATATCAGAAAATAC----AGTCACTGGCTGGTAAATTTTAAATGAGGATACCAGCATGTT-AAACCTTTAACTCAATCT i cerAty1.NW_012008583v1 C 0 I 90 s chlSab2.chr21 120416421 303 + 127223203 A-------AAAAGTAAAGACTGACCT---AGAATGTGAAGGCATTTTCTAATAGCAGATACCCAG-AT-TAACAAAGTTACTATAGACTCAA---A---------AGCACA-GACAGAAAAGATTCACTAACCACCAACATTTATT-----TTGCTTAACCATACCTGCCAACCTACTCAAAACATTCTTT-----GGATATAATCCTTG-TTCTTCA-TCA--GTCTAT-AACTTAAAA-AACTAATCTCAGGAAATCTATAA----ACTTAGATATCAGAAAATAC----AGTCACTCGCTGGTAAATTTTAAATCAGGATACCAGTATGTT-AAACCTTTAACTCAATCT i chlSab2.chr21 C 0 I 90 s manLeu1.NW_012102765v1 1542710 304 - 2854183 A-------AAAAGTAAAGACTGACCT---AGAATGTGAAGGCATTTTCTAATAGCAGATACCCAG-ATGTAACAAAGTTACTATAGACTTAT---A---------AGCACA-GACAGAAAAGATTTACTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTACCCAAAACATTCTTT-----GGATATAATCCTTG-TTCTTCA-TCA--GTCTAT-AACTTAAAA-GACTAATCTTAGGAAATCTATAA----ACTTAGATATCAGAAAATAC----AGTCACTGGCTGGTAAATTTTAAATGAGGATACCAGCATGTT-AAACCTTTAACTCAATCT i manLeu1.NW_012102765v1 C 0 I 90 s colAng1.NW_012115154v1 20249611 304 + 27496150 A-------AAAAGTAAAGACTGACCT---AGAATGTGAAGGCATTTTCTAATAGCAGATACCCAG-ATGTAACAAAGTTACTATAGACTCGA---A---------AGCACA-GACAGAAAAGATTTACTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTACCCAAAACATTCTTT-----GGATATAATCCTTG-TTCTTCA-TCA--CTGTCTCAACTTAAAA-GACTAATCTTAGGAAATCTATAA----ACTTAGATATCAG-AAATAC----AGTCACTGGCTGGTAAATTTTAAATCAGGATACCAGTATGTT-AAACCTTTAACTCAATCT i colAng1.NW_012115154v1 C 0 I 90 s calJac3.chr8 33702162 313 - 128169293 AAAAAGT-AAAAGTAAAGACTGATCT---AGAATGTGAAGGCATTTTCTAACAGTAGACACCCAG-ATGTAACAAAGTTTCTATAGACTC-----A---------AGCACA-GCCGGAAAAGATTTACTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTACCTAAAACATTCTTT-----GGATATAATCTTTT-TTCTTCAATCATTGTCTAT-AAATTAAGA-GACTAATCTTAAGAAGTCTATAA-CTTAATTAGATATCAG-AAATAT----AGTCACTGACTGGTAAATTTTAAATCAGGGTATCAGTGTGTT-AAACCTTTAACTCAATCT i calJac3.chr8 C 0 I 88 s saiBol1.JH378140 17037784 314 + 19594188 aaaaagtaaaaagtaaagactgatct---agaacgtgaaGGCATTTTCTAATAGTAGACACCCAG-ATGTAACAAAGTTTCTATAGACTC-----A---------AACACA-GCCAGGAAAGATTTACTAACCACCAGTATTTATT-----TTGCTTAACCATACCTGCCAACCTACCTAATACATTCTTT-----GGATATAACCTTTT-TTCTTCAATCATTGTCTAT-TAATTAAGA-GACTAATCTTAAGAAGTCTGTAA-CTTAATTAGATATCAG-AAATAT----AGTCACTGACTGGTAAATTTTAAATCAGGATATCAGTGTGTT-AAACCTTTAGCTCAATCT i saiBol1.JH378140 C 0 I 88 s cebCap1.NW_016107335v1 4925199 313 - 11686629 aaaaagt-aaaagtaaagacagatct---agaatgtgaaGGCATTTTCTAATAGTAGACACCCAA-ATGTAACCAAGTTTCTATAGACTC-----A---------AGCACA-GCCAGAAAAGATTTGCTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTGCCTAAAACATTCTTT-----GGATATAATCTTTT-TTCTTCAATCATTGTCTAT-AAATTAAGA-GACTAATCTTAAGAAGTCTATAA-CTTAATTAGATATCAG-AAATAT----AGTCACTGACTGGTAAATTTTAAATCAGGATATCAGTGTGTT-AAACCTTTAACTCAATCT i cebCap1.NW_016107335v1 C 0 I 88 s aotNan1.NW_018506100v1 3275760 313 - 4527795 AAAAAGT-AAAAGTAAAGACTGATCT---AGAATGTGAAGGCATTTTCTAATAGTAGACACCCAG-ATGTAACAAAGTTTCTACAGACTC-----A---------AGAACA-GCCGGAAAAGATTTACTAACCACCAATATTTATT-----TTGCTTAACCATACCTGCCAACCTACCTAAAACATCCTTT-----GGATATAATCTTTT-TTCTTCACTCATTGTCTAT-AAATTAAGA-GACTAATCTTAAGAAGTCTATAA-CTTAATTAGATATCAG-AAATAT----AGTCACTGACTGGTAAATTTTAAATCAGGATATTAGTGTATT-AAACCTTTAACTCAATCC i aotNan1.NW_018506100v1 C 0 I 88 s otoGar3.GL873572 5493873 292 - 12253515 A-------AAAAGTAAATACTCCAGT---AAAATGTAAAGATATCTTCCAATAGCAGACACCCAT------ACAATGCTGCTGTAGATTCAACCGA---------GTAACAGGACAGAACAGACTTAGTAACTACCAAGACTTAATCTTGCTTACTTGGCTGAACTTCCCAAAC-ACCCAATAGATTTTTTTTTTGGAAAAAAACCCTAA-TTCTTCA-TCATTGTCTAT-AACCTAAGA-GACCAATTTTAGCAAATTTATCA----------------G-AAATGT----AGTTACTGACTGGTAAATTTTA---------ATTACTGTGTT-AAACTTTTAACCCAATCT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16063254 298 + 59632846 A-------AAAAGTAAAGACTAGTCT---AGAATATGAAGAGTTTTTTTAATAGCAGGCGCTCAG-ATGTAATC---CTTCTGCAGAATCAG---ATGAGTAGCTATCACA-GGTAGAAGATACTT------------TACTTATT-----------AGCTGTACCTGCTAACAT----AACACATTTTTTT----GGATATAATCTTTG-TATTTCC-TCATCATCGAT-AATTAAATA-GGCAAATCTTACCAAGTCAATAAACATAATTAGATATCAG-AAATATCTAAAGTCACTAACTGGTAAATTTTAAGTCAGGGTGCCACTGTGTT-AAGCCTTTAACCCAAACA i canFam3.chr16 I 203 I 2 s dasNov3.JH575209 1233917 326 + 1922530 A-------AAAAATAAAGGCTACTCTATAAAAATGCAAAGATATTTTGCAATAGCAGACACCCTGAATGTAATAAAGCTTTCGTAGATTCAA---ATGAGTAAC-AGCACA-GACAGAAAAGATTTACTAATTACAAAGACTTATT-----TTGATTAGTTGTACCCATTAATGTATCCAATACATTTTTG-----GGATGTAACCCTTGTTTCTTCC-TCATTGACTAA-AAACTAAAGTGACTAATCTTAGCATGTCATTAAATTTAATTAGGTATCAG-AAATATAAACAGTAACTAACTGGTAAATTTTAAA--AGAGTACTAATATGTTAAAACCTTTAACCCAATCC i dasNov3.JH575209 C 0 C 0 e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=24508.000000 s hg38.chrUn_KI270746v1 61707 2 + 66486 CA s panTro5.chr7 156359307 2 + 166211670 CA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972391 2 + 162613886 CA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11493 2 + 12255 CA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102846632 2 + 110113093 CA i nomLeu3.chr13 I 296 C 0 s rheMac8.chr3 178463041 2 + 185818997 CA i rheMac8.chr3 I 90 C 0 s macFas5.chr3 184952776 2 + 192294377 CA i macFas5.chr3 I 90 C 0 s macNem1.NW_012015910v1 7921370 2 + 15219753 CA i macNem1.NW_012015910v1 I 90 C 0 s cerAty1.NW_012008583v1 9565557 2 + 11639508 CA i cerAty1.NW_012008583v1 I 90 C 0 s chlSab2.chr21 120416814 2 + 127223203 CA i chlSab2.chr21 I 90 C 0 s manLeu1.NW_012102765v1 1543104 2 - 2854183 CA i manLeu1.NW_012102765v1 I 90 C 0 s colAng1.NW_012115154v1 20250005 2 + 27496150 CA i colAng1.NW_012115154v1 I 90 C 0 s calJac3.chr8 33702563 2 - 128169293 CA i calJac3.chr8 I 88 C 0 s saiBol1.JH378140 17038186 2 + 19594188 CA i saiBol1.JH378140 I 88 C 0 s cebCap1.NW_016107335v1 4925600 2 - 11686629 CA i cebCap1.NW_016107335v1 I 88 C 0 s aotNan1.NW_018506100v1 3276161 2 - 4527795 CA i aotNan1.NW_018506100v1 I 88 C 0 s otoGar3.GL873572 5494165 2 - 12253515 TA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16063554 2 + 59632846 CC i canFam3.chr16 I 2 C 0 s dasNov3.JH575209 1234243 2 + 1922530 TA i dasNov3.JH575209 C 0 I 298 e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=4573.000000 s hg38.chrUn_KI270746v1 61709 1 + 66486 T----- s panTro5.chr7 156359309 1 + 166211670 T----- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972393 1 + 162613886 T----- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11495 1 + 12255 T----- i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102846634 1 + 110113093 T----- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463043 1 + 185818997 T----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952778 1 + 192294377 T----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7921372 1 + 15219753 T----- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9565559 1 + 11639508 T----- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416816 1 + 127223203 T----- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543106 1 - 2854183 T----- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250007 1 + 27496150 T----- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33702565 1 - 128169293 T----- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038188 1 + 19594188 T----- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925602 1 - 11686629 T----- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276163 1 - 4527795 T----- i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5494167 1 - 12253515 T----- i otoGar3.GL873572 C 0 I 151 s canFam3.chr16 16063556 6 + 59632846 TAAAAA i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=324503.000000 s hg38.chrUn_KI270746v1 61710 38 + 66486 CAAGGT--AATTTTTA------------------AGTTATAGTAAAAAGACACTGCTA s panTro5.chr7 156359310 38 + 166211670 CAAGGT--AATTTTTA------------------AGTTATAGTAAAAAGACACTGCTA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972394 35 + 162613886 CAAGGT--AATTTTTANNNNNNNNNNNNNNNNNNNNt--------------------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11496 38 + 12255 CAAGGT--AATTTTTA------------------AATTATAGTAAAAAGACACTGCTA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102846635 38 + 110113093 CAAGGT--AATTTTTA------------------AGTTACAGTAAAAAGACACTGCTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463044 38 + 185818997 CAAGGT--AATTTTTA------------------AGTTATAGTAAAAAGACACTACCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952779 38 + 192294377 CAAGGT--AATTTTTA------------------AGTTATAGTAAAACGACACTACCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7921373 38 + 15219753 CAAGGT--AATTTTTA------------------AGTTATAGTAAAAAGACACTACCA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9565560 38 + 11639508 CAAGGT--AATTTTTA------------------AGTTATAGTAAAAAGACACTACCA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416817 38 + 127223203 CAAGGT--AATTTTTA------------------AGTTATAGTAAAAAGACACTACCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543107 38 - 2854183 CAAGGT--AATTTTTA------------------AGTTATAGTAAAAAGACACTACCA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250008 38 + 27496150 CAAGTT--AATTTTTA------------------AGTTATAGTAAAAAGACACTACCA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33702566 38 - 128169293 CAAGGT--CACTTTTA------------------ATTTATAGTAAAAAGACACTACTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038189 38 + 19594188 CAAGGT--AATTTTTA------------------ATTTATAGTAAAAAGACACTACTA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925603 38 - 11686629 CAAGGT--AATTTTTA------------------ATTTATAGTAAAAAGACACTACTA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276164 38 - 4527795 CAAGGT--AATTTTTA------------------ATTTATAGTAAAAAGACACTACTA i aotNan1.NW_018506100v1 C 0 I 46 s canFam3.chr16 16063562 40 + 59632846 CAAAGTCAAAGATCCA------------------ATTTACATAAGACCTACATGGCTC i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494168 151 - 12253515 I a score=233323.000000 s hg38.chrUn_KI270746v1 61748 37 + 66486 GCCTCATTTACA-------AATCAGTGACTAAAATTTATCTAT-T s panTro5.chr7 156359348 38 + 166211670 GCCTCATTTACC-------AATCAGTGACTAAAATTTATCTATGt i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11534 37 + 12255 GCCTCATTTACC-------AATCAGTGACTAAAATTTATCTAT-T i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102846673 38 + 110113093 GCCTCATTTACC-------AACCAGTGACTAAAATTTATCTATGt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463082 38 + 185818997 TCCTCATTTACC-------AATCAGTGACTAAAATTTATCTATGt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952817 38 + 192294377 TCCTCATTTACC-------AATCAGTGACTAAAATTTATCTATGt i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7921411 38 + 15219753 TCCTCATTTACC-------AATCAGTGACTAAAATTTATCTATGt i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9565598 38 + 11639508 TCCTCATTTACC-------AATCAGTGACTAAAATTTATCTATGt i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416855 38 + 127223203 TCCTCATTTACC-------AATCAGTGACTAAAATTTATCTATGt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543145 38 - 2854183 TCCTCATTTACC-------AATCAGTGACTAAAATTTATCTATGt i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250046 38 + 27496150 TCCTCATTTACC-------AATCAGTGACCAAAATTTATCTATGt i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33702604 44 - 128169293 TCCTCATTTACCATTTACTAATCAATGACTAAAA-TTATCGATGG i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038227 44 + 19594188 TCCTCATTTACTATTTACTAATCGAGGACTAAAA-TTATCTATGG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925641 44 - 11686629 TCCTCATTTACTATTTACTAATCAAGGACTAAAA-TTATCTATGG i cebCap1.NW_016107335v1 C 0 C 0 s canFam3.chr16 16063602 35 + 59632846 -TATCAGGTAA--------GATCACTGGATAAAATGCACTTATT- i canFam3.chr16 C 0 I 292 e dasNov3.JH575209 1234245 298 + 1922530 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494168 151 - 12253515 I e aotNan1.NW_018506100v1 3276202 46 - 4527795 I e panPan2.chr7 155972429 0 + 162613886 C a score=-30592.000000 s hg38.chrUn_KI270746v1 61785 11 + 66486 TATCTATGttc s panTro5.chr7 156359386 11 + 166211670 tcttttttttt i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11571 11 + 12255 TATCTATGttc i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102846711 11 + 110113093 ttttttttttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463120 2 + 185818997 tc--------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952855 2 + 192294377 tc--------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7921449 2 + 15219753 tc--------- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9565636 2 + 11639508 tc--------- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416893 2 + 127223203 tc--------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543183 2 - 2854183 tc--------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250084 2 + 27496150 tc--------- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33702648 8 - 128169293 Gt--tttttt- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038271 10 + 19594188 GTTGtttttt- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925685 10 - 11686629 GTTGtttttt- i cebCap1.NW_016107335v1 C 0 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16063637 292 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494168 151 - 12253515 I e aotNan1.NW_018506100v1 3276202 46 - 4527795 I e panPan2.chr7 155972429 0 + 162613886 C a score=26447.000000 s hg38.chrUn_KI270746v1 61796 10 + 66486 tttttttttt-- s panTro5.chr7 156359397 10 + 166211670 tttttttttt-- i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11582 10 + 12255 tttttttttt-- i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102846722 10 + 110113093 tttttttttt-- i nomLeu3.chr13 C 0 I 4 s rheMac8.chr3 178463122 8 + 185818997 --tttttttt-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952857 8 + 192294377 --tttttttt-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7921451 8 + 15219753 --tttttttt-- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9565638 9 + 11639508 -ttttttttt-- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416895 7 + 127223203 ---ttttttt-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543185 9 - 2854183 -ttttttttt-- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250086 7 + 27496150 ---ttttttt-- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33702656 9 - 128169293 --ttttgtttg- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038281 10 + 19594188 --gtttgtttgt i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925695 9 - 11686629 ---tttgtttgt i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276248 10 - 4527795 --ttttttttgt i aotNan1.NW_018506100v1 I 46 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16063637 292 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494168 151 - 12253515 I e panPan2.chr7 155972429 0 + 162613886 C a score=16562.000000 s hg38.chrUn_KI270746v1 61806 2 + 66486 tt s panTro5.chr7 156359407 2 + 166211670 tt i panTro5.chr7 C 0 I 1 s gorGor5.CYUI01009314v1 11592 2 + 12255 tt i gorGor5.CYUI01009314v1 C 0 I 1 s nomLeu3.chr13 102846736 2 + 110113093 tt i nomLeu3.chr13 I 4 C 0 s rheMac8.chr3 178463130 2 + 185818997 tt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952865 2 + 192294377 tt i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7921459 2 + 15219753 tt i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9565647 2 + 11639508 tt i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416902 2 + 127223203 tt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543194 2 - 2854183 tt i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250093 2 + 27496150 tt i colAng1.NW_012115154v1 C 0 C 0 s saiBol1.JH378140 17038291 2 + 19594188 tt i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925704 2 - 11686629 tt i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276258 2 - 4527795 tt i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16063637 292 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494168 151 - 12253515 I e panPan2.chr7 155972429 0 + 162613886 C e calJac3.chr8 33702665 0 - 128169293 C a score=1283326.000000 s hg38.chrUn_KI270746v1 61808 149 + 66486 gaaacagg------atctcactctgtgacccaagctggagtgcagtagcac-aaacatggctcactgcagcctcaacctcctgggctcaagtggtcctcccacctcagcctccgaaactgctgggactgcaggcatgtgtcaccatgcccagatac-------- s panTro5.chr7 156359410 149 + 166211670 gaaacagg------gtctcactctgtgacccaagctggagtagagtagcac-aaacatggctcactgcagcctcaacctcctgggctcaagtggtcctcctacctcagcctcccaagctgctgggactgcacgcatgtgtcaacatccccagatac-------- i panTro5.chr7 I 1 C 0 s panPan2.chr7 155972429 149 + 162613886 gaaacagg------gtctcactctgtgacccaagctggagtagagtagcac-aaacatggctcactgcagcctcaacctcctgggctcaagtggtcctcctacctcagcctcccaagctgctgggactgcacgcatgtgtcaccatccccagatac-------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11595 155 + 12255 gaaacaggatctcaatctcactctgtgacccaagctggagtgcagtagcac-aaacatggctcactgcagcctcaacctcgtgggctcaagtggtcctcccacctcagcctcccaaactgctgggactgcaggcatgtgtcaccatgcccagattt-------- i gorGor5.CYUI01009314v1 I 1 C 0 s nomLeu3.chr13 102846738 148 + 110113093 gaaacagg------gtctcactctgtgacccaagctggagtgcagtagcac-aaacatggcgcactgcagcctcaacctcctgggctcaagtggtcctcccacctcagcctcc-aagctactgggactacaggtatgtgtcaccatgcccagatac-------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463132 149 + 185818997 gaaacagg------gtctcactctgtcacccaagctggagtgcagtagcac-aaacatggctcactgcagcctcaacctcctgggctcaagtgatcttcccaccttagcctcccaagcagctgggactacaggcatgtgtcaccatgcccagATAC-------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184952867 149 + 192294377 gaaacagg------gtctcactctgtcacccaagctggagtgcagtagcac-aaacatggctcactgcagcctcaacctcctgggctcaagtgatcttcccaccttagcctcccaagcagctgggactacaggcatgtgtcaccatgcccagATAC-------- i macFas5.chr3 C 0 I 180 s macNem1.NW_012015910v1 7921461 149 + 15219753 gaaacagg------gtctcactctgtcacccaagctggagtgcagtagcac-aaacatggctcactgcagcctcaacctcctgggctcaagtgatcttcccaccttagcctcccaagcagctgggactacaggcatgtgtcaccatgcccagATAC-------- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9565649 149 + 11639508 gaaacagg------gtctcactctgtcacccaagctggagtgcagtagcac-aaacatggctcactgcagcctcaacctcctgggctcaagtgatcttcccaccttagcctcccaagcagctgggactacaggcatgtgtcaccatgcccagATAC-------- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120416904 149 + 127223203 gaaacagg------gtctcactctgtcacccaagctggagtgcagtagcac-aaacacggctcactgcagcctcaacctcctgggctcaagcgatcttcccacctcagcctcccaagcagctgggactacaggcatgtgtcaccatgcccagATAC-------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543196 149 - 2854183 gaaacagg------gtctcactctgtcacccaagctggagtgcagtagcac-aaacatggctcactgcagcctcaacctcctgggctcaagtgatcttcccaccttagcctcccaagcagctgggactacaggcatgtgtcaccatgcccagATAC-------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250095 150 + 27496150 gaaacagg------gtctcactctgtcacccaagctggagtgcagtagtacaaaacatggctcactgcagcctcaatgtcctgggttcaagtgatcttcccacctcagcctcccaagcagctgggactacaggcatgtgtcaccatgcccagATAC-------- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33702665 135 - 128169293 aagacagg------gtcttac-------acaaaaaaagagtacagta-cac-aaacatga------------gcaacctcctgggctcaagtgatcctcccacctcagcctcctgagcagctgggactacaggcatatatcaccatgtctggatatat--tttt i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038293 138 + 19594188 gagacagg------gtcttactctgtcacccaagccagagtacagta-cac-aaacatga------------gcaacctcctgggctcaagtgatcctcccacctcagcctcctgagcagctgggactacaggcatatatcaccatgtctggata------ctc i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925706 141 - 11686629 gagacagg------gtcttactctgtcacccaagctggagtacagta-cac-aaacatga------------gcaacctcctgggctcaagtgatcctcccacctcagcctcctgagcagctgggactacaggcatatatcaacatgtctggatacgc---ttt i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276260 144 - 4527795 gagacagg------gtcttactctgtcacccaagctggagtacagta-cac-aaacatga------------gcaacctcctgggctcaagtgattctcccacctcagcctcctgagcagctgggactacaggcatatatcaccatgtctggatactttttttt i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16063637 292 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494168 151 - 12253515 I a score=34983.000000 s hg38.chrUn_KI270746v1 61957 4 + 66486 tttt s panTro5.chr7 156359559 4 + 166211670 tttt i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972578 3 + 162613886 -ttt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11750 3 + 12255 -ttt i gorGor5.CYUI01009314v1 C 0 C 0 s rheMac8.chr3 178463281 4 + 185818997 TTTT i rheMac8.chr3 C 0 I 180 s macFas5.chr3 184953196 4 + 192294377 tttt i macFas5.chr3 I 180 C 0 s macNem1.NW_012015910v1 7921610 4 + 15219753 TTTT i macNem1.NW_012015910v1 C 0 I 185 s cerAty1.NW_012008583v1 9565798 4 + 11639508 TTTT i cerAty1.NW_012008583v1 C 0 I 185 s chlSab2.chr21 120417053 4 + 127223203 Tttt i chlSab2.chr21 C 0 I 185 s manLeu1.NW_012102765v1 1543345 4 - 2854183 TTTT i manLeu1.NW_012102765v1 C 0 I 185 s colAng1.NW_012115154v1 20250245 4 + 27496150 TTTT i colAng1.NW_012115154v1 C 0 I 182 s calJac3.chr8 33702800 4 - 128169293 tttt i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038431 4 + 19594188 tttt i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925847 4 - 11686629 tttt i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276404 4 - 4527795 tttt i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16063637 292 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494168 151 - 12253515 I e nomLeu3.chr13 102846886 0 + 110113093 C a score=13355.000000 s hg38.chrUn_KI270746v1 61961 5 + 66486 tttgt s panTro5.chr7 156359563 5 + 166211670 tttat i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972581 5 + 162613886 tttat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11753 5 + 12255 tttat i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102846886 5 + 110113093 tttat i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184953200 4 + 192294377 -ttgt i macFas5.chr3 C 0 I 1 s calJac3.chr8 33702804 5 - 128169293 ttttt i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038435 5 + 19594188 ttttt i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925851 5 - 11686629 ttttt i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276408 5 - 4527795 ttttt i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16063637 292 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494168 151 - 12253515 I e colAng1.NW_012115154v1 20250249 182 + 27496150 I e manLeu1.NW_012102765v1 1543349 185 - 2854183 I e chlSab2.chr21 120417057 185 + 127223203 I e cerAty1.NW_012008583v1 9565802 185 + 11639508 I e macNem1.NW_012015910v1 7921614 185 + 15219753 I e rheMac8.chr3 178463285 180 + 185818997 I a score=9555.000000 s hg38.chrUn_KI270746v1 61966 1 + 66486 t s panTro5.chr7 156359568 1 + 166211670 t i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972586 1 + 162613886 t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11758 1 + 12255 t i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102846891 1 + 110113093 t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463465 1 + 185818997 t i rheMac8.chr3 I 180 C 0 s macFas5.chr3 184953205 1 + 192294377 t i macFas5.chr3 I 1 C 0 s macNem1.NW_012015910v1 7921799 1 + 15219753 t i macNem1.NW_012015910v1 I 185 C 0 s cerAty1.NW_012008583v1 9565987 1 + 11639508 t i cerAty1.NW_012008583v1 I 185 C 0 s chlSab2.chr21 120417242 1 + 127223203 t i chlSab2.chr21 I 185 C 0 s manLeu1.NW_012102765v1 1543534 1 - 2854183 t i manLeu1.NW_012102765v1 I 185 C 0 s calJac3.chr8 33702809 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038440 1 + 19594188 t i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925856 1 - 11686629 t i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276413 1 - 4527795 t i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16063637 292 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494168 151 - 12253515 I e colAng1.NW_012115154v1 20250249 182 + 27496150 I a score=479742.000000 s hg38.chrUn_KI270746v1 61967 57 + 66486 tttgtagagatagggtctcactatattgcccaggcCTATACATGTTctgataccaaa s panTro5.chr7 156359569 46 + 166211670 tttgtagagacagggtctcactatatcgcccaggcCTATACATGTT----------- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972587 46 + 162613886 tttgtagagacagggtctcactatatcgcccaggcCTATACATGTT----------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11759 46 + 12255 tttgtagagacagggtctcactatattgcccaggcCTATACATGTT----------- i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102846892 46 + 110113093 tttgtagagacagggtctcactatattgcccaggcCTATACATGTT----------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463466 46 + 185818997 tttgtagagacagggtctcactatattgcccaggCCTATACATGTT----------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184953206 46 + 192294377 tttgtagagacagggtctcactatattgcccaggCCTATACATGTT----------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7921800 46 + 15219753 tttgtagagacagggtctcactatattgcccaggCCTACACATGTT----------- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9565988 46 + 11639508 tttgtagagacagggtctcactatattgcccaggCCTATACATGTT----------- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120417243 46 + 127223203 tttgtagagacagggtctcactatattgcccaggCCTATACATGTT----------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543535 46 - 2854183 tttgtagagacagggtctcactatattgcccaggCCTATACATGTT----------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250431 46 + 27496150 tttgtagagacagggtctcactatattgcccaggCCTATTCATGAT----------- i colAng1.NW_012115154v1 I 182 C 0 s calJac3.chr8 33702810 46 - 128169293 tttttagagacagggtctcactatattgcccaggcCTATACATGTT----------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038441 46 + 19594188 tcggtagagacaggagttcactatattgcccaggcCTATACATGTT----------- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925857 46 - 11686629 tttgtggagacaggggctcactatattgcccaggcCTATACATGTT----------- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276414 46 - 4527795 tttgtagagacagggtctcactatattgcccaggcCTATACATGTT----------- i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16063637 292 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494168 151 - 12253515 I a score=1190785.000000 s hg38.chrUn_KI270746v1 62024 108 + 66486 ctgataccaaactgaAATCTCATCTTCT-TTCCCACTTTATTGAAAGACTACAGGTAAGGATAAA--TGAAAACTACCAAATAACAGATCTGATGGTACAAAATATTTTTA s panTro5.chr7 156359615 108 + 166211670 CTGATATCAAACTGAAATCTCATCTTCT-TTCCCACTTTATTGAAAGACTACAGGTAAGGATAAA--AGAAAACTACCAAATAACAGATCTGAAAGTACAAAATATTTTTA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972633 108 + 162613886 CTGATATCAAACTGAAATCTCATCTTCT-TTCCCACTTTATTGAAAGACTACAGGTAAGGATAAA--AGAAAACTACCAAATAACAGATCTGAAAGTACAAAATATTTTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11805 108 + 12255 CTGATACCAAACTGAAATCTCATCTTCT-TTCCCACTTTATTGAAAGACTACAGGTAAGGATAAA--AGAAAACTACCAAATAACAGATCTGATAGTACAAAATATTTTTA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102846938 108 + 110113093 CTGATATCAAACTGAAATCTCATCTTCT-TTCCCACTTTATTGAAAGACTACAGGTAAGGATAAA--AGAAAACTACCAAATAACAGATCTGATAGTACAAAATATTTTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463512 108 + 185818997 CTGATATCAAACTGAAATCTCATCTTCT-TTCTCACTTTATTGAAAGACTACAGCTAAGGATAAA--AGAAAACTACCAAATAACAGATCTGATAGTACAATATATTTTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184953252 108 + 192294377 CTGATATCAAACTGAAATCTCATCTTCT-TTCTCACTTTATTGAAAGACTACAGCTAAGGATAAA--AGAAAACTACCAAATAACAGATCTGATAGTACAATATATTTTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7921846 108 + 15219753 CTGATATCAAACTGAAATCTCATCTTCT-TTCTCACTTTATTGAAAGACTACAGCTAAGGATAAA--AGAAAACTAACAAATAACAGATCTGATAGTACAATATATTTTTA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9566034 108 + 11639508 CTGATATCAAACTGAAATCTCATCTTCT-TTCTCACTTTATTGAAAGACTACAGCTAAGGATAAA--AGAAAACTACCAGATAACAGATCTGATAGTACAATATATTTTTA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120417289 108 + 127223203 CTGATATCAAACTGAAATCTCATCATCT-TTCTCACTTTATTGAAAGACTATAGCTAAGGATAAA--AGAAAACTACCAAATAACAGATCTGATAGTACAACATATTTTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543581 108 - 2854183 CTGATATCAAACTGAAATCTCATCTTCT-TTCTCACTTTATTGAAAGACTACAGCTAAGGATAAA--AGAAAACTACCAAATAACAGATCTGATAGTACAATATATTTTTA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250477 108 + 27496150 CTGATATCAAACTGAAATCTCATCTTCT-TTCTCACTTTATTGAAAGACTACAGCTAAGGATAAA--AGAAAACTACCAAATAACAGATCTGATAGTACAACCTATTTTTA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33702856 106 - 128169293 CTGATATCAAACTGAAATCTCATCTTCG-TTCCCATTTTATTGAAAGAC--CAGTTAAGGATAAA--GGAAAAATGCCAAATAACAGATTTGATAGTATGAAATATTTTTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038487 106 + 19594188 CTGATATCAAACTGAAATCTCATCTTCT-TTCCCATTTTATTGAAAGAC--CAGTTAAGGATAAA--GGAAAAATACCAAATAACAGATTTGATAGTATAAAATATTTTTA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4925903 106 - 11686629 CTGATATCAAACTGAAATCTCATCTTCT-TTCCCATTTTATTGAAAGAC--CAGTTAAGGATAAA--AGAAAAATACCAAATAACAGATTTGATAGTATGAAATATTTTTA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276460 100 - 4527795 CTGGTATCAAACTGAAATCTCACCTTCT-TTCCCATTTTATTGAAAGAC--CAGTTAAAGA--------AAAAATACCAAATAACAGATTTGATAGTATGAAATACTTTTA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5494319 90 - 12253515 CCAGTATCAGAATGAAATCTCACTTTCCATTCCTCATTTATTGAAAGA--------------AAG--AAAAAA-----AAATAACAGATCTGATAGCATTAAATATTTTTA i otoGar3.GL873572 I 151 C 0 s canFam3.chr16 16063929 110 + 59632846 CTGATAGCAAAATGAAATCCCACTTTTC-ATTTCTACTCCCTGAAAGACTACAGTTAAGGATAAAGGGGAAAAACATCAAATAACAGATCTGATCATACCAAGTATTTTTA i canFam3.chr16 I 292 I 510 e dasNov3.JH575209 1234245 298 + 1922530 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=59597.000000 s hg38.chrUn_KI270746v1 62132 8 + 66486 ATCATGAT s panTro5.chr7 156359723 8 + 166211670 ATCATGAC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972741 8 + 162613886 ATCATGAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11913 8 + 12255 ATCATGAC i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102847046 8 + 110113093 ACCATGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463620 8 + 185818997 ACCACAAC i rheMac8.chr3 C 0 I 1 s macFas5.chr3 184953360 8 + 192294377 ACCACAAC i macFas5.chr3 C 0 I 1 s macNem1.NW_012015910v1 7921954 8 + 15219753 ACCACAAC i macNem1.NW_012015910v1 C 0 I 1 s cerAty1.NW_012008583v1 9566142 8 + 11639508 ACCACAAC i cerAty1.NW_012008583v1 C 0 I 25 s chlSab2.chr21 120417397 8 + 127223203 ACCACAAC i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012102765v1 1543689 8 - 2854183 ACCACAAC i manLeu1.NW_012102765v1 C 0 I 1 s colAng1.NW_012115154v1 20250585 8 + 27496150 ACCACGAC i colAng1.NW_012115154v1 C 0 I 1 s calJac3.chr8 33702962 8 - 128169293 ACCATAAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038593 8 + 19594188 ACCACAAC i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4926009 8 - 11686629 ACCACAAC i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276560 8 - 4527795 ACCACAAC i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5494409 3 - 12253515 --CAT--- i otoGar3.GL873572 C 0 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16064039 510 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173327546 9584 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=16762.000000 s hg38.chrUn_KI270746v1 62140 7 + 66486 AT-CCCCC s panTro5.chr7 156359731 8 + 166211670 CTCCCCCC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972749 7 + 162613886 CT-CCCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11921 7 + 12255 CT-CCCCC i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102847054 8 + 110113093 CTCCCCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463629 6 + 185818997 --GCCTCC i rheMac8.chr3 I 1 C 0 s macFas5.chr3 184953369 6 + 192294377 --GCCTCC i macFas5.chr3 I 1 C 0 s macNem1.NW_012015910v1 7921963 6 + 15219753 --GCCTCC i macNem1.NW_012015910v1 I 1 C 0 s chlSab2.chr21 120417406 6 + 127223203 --GTCCCC i chlSab2.chr21 I 1 I 15 s manLeu1.NW_012102765v1 1543698 6 - 2854183 --GCCCCC i manLeu1.NW_012102765v1 I 1 I 15 s nasLar1.chr3 173337130 6 + 179790006 --ACCCCC i nasLar1.chr3 I 9584 I 7184 s colAng1.NW_012115154v1 20250594 6 + 27496150 --GCCCCC i colAng1.NW_012115154v1 I 1 C 0 s calJac3.chr8 33702970 5 - 128169293 ---CCCCA i calJac3.chr8 C 0 I 1 s saiBol1.JH378140 17038601 5 + 19594188 ---CCCCC i saiBol1.JH378140 C 0 I 7 s cebCap1.NW_016107335v1 4926017 5 - 11686629 ---CCCCC i cebCap1.NW_016107335v1 C 0 I 1 s aotNan1.NW_018506100v1 3276568 5 - 4527795 ---CTCCA i aotNan1.NW_018506100v1 C 0 I 1 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16064039 510 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494412 0 - 12253515 C e cerAty1.NW_012008583v1 9566150 25 + 11639508 I a score=3112.000000 s hg38.chrUn_KI270746v1 62147 7 + 66486 TCCAAAA s panTro5.chr7 156359739 7 + 166211670 TCCaaaa i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972756 7 + 162613886 TCCaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11928 7 + 12255 TCCAAAA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102847062 7 + 110113093 TCCaaaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463635 6 + 185818997 -CCCAAC i rheMac8.chr3 C 0 I 13 s macFas5.chr3 184953375 6 + 192294377 -CCCAAC i macFas5.chr3 C 0 I 14 s macNem1.NW_012015910v1 7921969 6 + 15219753 -CCCAAC i macNem1.NW_012015910v1 C 0 I 13 s colAng1.NW_012115154v1 20250600 7 + 27496150 CCAAGAC i colAng1.NW_012115154v1 C 0 I 6 s calJac3.chr8 33702976 1 - 128169293 ------C i calJac3.chr8 I 1 I 2 s saiBol1.JH378140 17038613 5 + 19594188 --CACAC i saiBol1.JH378140 I 7 I 2 s cebCap1.NW_016107335v1 4926023 4 - 11686629 ---ACAC i cebCap1.NW_016107335v1 I 1 I 2 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16064039 510 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494412 0 - 12253515 C e aotNan1.NW_018506100v1 3276573 1 - 4527795 I e manLeu1.NW_012102765v1 1543704 15 - 2854183 I e chlSab2.chr21 120417412 15 + 127223203 I e cerAty1.NW_012008583v1 9566150 25 + 11639508 I a score=45999.000000 s hg38.chrUn_KI270746v1 62154 11 + 66486 AAAAAAAAAGG------------ s panTro5.chr7 156359746 23 + 166211670 aaaaaaaaaaaaaaaaaaaaaaC i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972763 20 + 162613886 aaaaaaaaaaa---aaaaaaaCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11935 8 + 12255 AAAAAAAA--------------- i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102847069 20 + 110113093 aaaaaaaaaaa---aaaaaaaaC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463654 11 + 185818997 AAAAAAAAACT------------ i rheMac8.chr3 I 13 C 0 s macFas5.chr3 184953395 11 + 192294377 AAAAAAAAACC------------ i macFas5.chr3 I 14 C 0 s macNem1.NW_012015910v1 7921988 11 + 15219753 AAAAAAAAACC------------ i macNem1.NW_012015910v1 I 13 C 0 s cerAty1.NW_012008583v1 9566175 11 + 11639508 AAAAAAAAACC------------ i cerAty1.NW_012008583v1 I 25 C 0 s chlSab2.chr21 120417427 11 + 127223203 AAAAAAAAACC------------ i chlSab2.chr21 I 15 C 0 s manLeu1.NW_012102765v1 1543719 11 - 2854183 AAAAAAAAACC------------ i manLeu1.NW_012102765v1 I 15 C 0 s colAng1.NW_012115154v1 20250613 11 + 27496150 CAAAAAAAACC------------ i colAng1.NW_012115154v1 I 6 C 0 s calJac3.chr8 33702979 10 - 128169293 AAAAAAAAA-C------------ i calJac3.chr8 I 2 C 0 s saiBol1.JH378140 17038620 10 + 19594188 ACAAAAAAA-C------------ i saiBol1.JH378140 I 2 C 0 s cebCap1.NW_016107335v1 4926029 11 - 11686629 AAAAAAAAGCC------------ i cebCap1.NW_016107335v1 I 2 C 0 s aotNan1.NW_018506100v1 3276574 11 - 4527795 AAAAAAAAACC------------ i aotNan1.NW_018506100v1 I 1 C 0 s otoGar3.GL873572 5494412 9 - 12253515 --ACAAAAACC------------ i otoGar3.GL873572 C 0 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e canFam3.chr16 16064039 510 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=199007.000000 s hg38.chrUn_KI270746v1 62165 16 + 66486 CTTTCAAGAGAAACTA s panTro5.chr7 156359769 16 + 166211670 CTTTCAAGAGAAACTA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972783 16 + 162613886 TTTACAAGAGAAACTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11943 16 + 12255 CTTTCAAGAGAAACTA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102847089 16 + 110113093 CTTTCAAGAGAAACTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463665 16 + 185818997 CTTTCAAGAGAAACTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184953406 16 + 192294377 CTTTCAAGAGAAACTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7921999 16 + 15219753 CTTTCAAGAGAAACTA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9566186 16 + 11639508 CTTTCAAGAGAAACTA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120417438 16 + 127223203 CTTTCAAGAGAAACTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543730 16 - 2854183 CTTTCAAGAGAAACTA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250624 16 + 27496150 CTTTCAAGAGAAACTA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33702989 16 - 128169293 TTTTCAAGAGAAACTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038630 16 + 19594188 TTTTCAAGAGAAACTA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4926040 16 - 11686629 TTTTCAAGAGAAACTA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3276585 16 - 4527795 TTTTCAAGAGAAACTA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5494421 16 - 12253515 CTTTCTAGAGAAACTA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16064549 16 + 59632846 CTCTACAGAGAATTTA i canFam3.chr16 I 510 C 0 e dasNov3.JH575209 1234245 298 + 1922530 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=972301.000000 s hg38.chrUn_KI270746v1 62181 107 + 66486 ACATACTTTAG--ATCCATTGTCAATTCTTTTC------------CAGAA-----TCTCTTAACTAAAAGATGTAGTTACTGTA----------ATGTATATACATACAGCAATTGC-AA--------AAATGTCTTTGGGAT-----------------------------------------------AA------ s panTro5.chr7 156359785 107 + 166211670 ACCTTCTTTAG--ATCCATTGTCAATTCTTTTC------------CAGAA-----TCTCTTAACTAAAAGATTTAGTTACCGTA----------ATGTATATACATACAGCAATTGC-AA--------AAATGTCTTTGGGAT-----------------------------------------------AA------ i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972799 107 + 162613886 ACCTTCTTTAG--ATCCATTGTCAATTCTTTTC------------CAGAA-----TCTCTTAACTAAAAGATTTAGTTACCGTA----------ATGTATATACATACAGCAATTGC-AA--------AAATGTCTTTGGGAT-----------------------------------------------AA------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 11959 108 + 12255 ACCTACTTTAG--ATCCATTGTCAATTCTTTTC------------CAGAA-----TCTCTTAACTAAAAGATTTAGTTACTGTA----------ATGTATATACATACAGCAATTGCAAA--------AAATGTCTTTGGGAT-----------------------------------------------AA------ i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102847105 107 + 110113093 ATCTCCTTTAG--ATCCATTGTCAACTCTTTTC------------CAGAA-----TCTCTTAACTAAAAGATTTAGTTACTAAA----------ATGTGTATACATACAGCAATTGC-AA--------AAATGTCTTTGGGAT-----------------------------------------------AA------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463681 128 + 185818997 ACCTCCTTTAG--ATCTACTGTCTCTTTAGATC------------CAGAA-----TCTCTTAACTAAAAGATTTAGTTACTGTA----------ATGTGTATACATACAGCAATTGC-AA--------AAATGTCTTTGGAATAA-----------------------AGACATTACCTTGTA---ACATAA------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184953422 128 + 192294377 ACCTCCTTTAG--ATCTACTGTCTCTTTAGATC------------CAGAA-----TCTCTTAACTAAAAGATTTAGTTACTGTA----------ATGTGTATACATACAGCAATTGC-AA--------AAATGTCTTTGGAATAA-----------------------AGACATTACCTTGTA---ACATAA------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7922015 128 + 15219753 ACCTCCTTTAG--ATCTACTGTCTCTTTAGATC------------CAGAA-----TCTCTTAACTAAAAGATTTAGTTACTGTA----------ATGTGTATACATACAGCAATTGC-AA--------AAATGTCTTTGGAATAA-----------------------AGACATTACCTTGTA---ACATAA------ i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9566202 128 + 11639508 ACCTCCTTTAG--ATCTACTGTCTCTTTAGATC------------CAGAA-----TCTCTTAACTAAAAGATTTAGTTACTGTA----------ATATGTATACATACAGCAATTGC-AA--------AAATGTCTTTGGAATAA-----------------------AGACATTAGCTTGTA---ACATAA------ i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120417454 128 + 127223203 ACCTCCTTTAG--ATCTACTGTCTCTTTAGATC------------CAGAA-----TCTCTTAACTAAAAGATTTAGTTACTGTA----------ATGTGTATACATACAGCAATTGC-AA--------AAATGTCTTTGGAATAA-----------------------AGACATTACCTTGTA---ACATAA------ i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543746 128 - 2854183 ACCTCCTTTAG--ATCTACTGTCTCTTTAGATC------------CAGAA-----TCTCTTAACTAAAAGATTTAGTTACTGTA----------ATGTGTATACATACAGCAATTGC-AA--------AAATGTCTTTGGAATAA-----------------------AGACATTACCTTGTA---ACATAA------ i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250640 126 + 27496150 ACCTCCTTTAG--ATCCACTGTCAATTCTTTTC------------CAGAA-----TCTCTTAACTAAAAGATTTAGTTACTGTA----------ATGTGTATACATACAGCAATTGC-AA--------AAATGTCTTTGAAAT-------------------------AGACATTACCTTGTA---ATATAA------ i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33703005 100 - 128169293 ACCTCCTTTAG--ATCCACTGTCAATTCTTTTC------------CAGAA-----T-------CTAAAAGGTTTAGTTACTGTA----------ATGTGTATACATACAGCAATGGC-AA--------AAATGTCTTTGGAAT-----------------------------------------------AA------ i calJac3.chr8 C 0 I 56 s saiBol1.JH378140 17038646 107 + 19594188 ACCTCCTTTAG--ATCCACTGTCAATTCTTTTC------------CAGAA-----TCTCTTAACTAAAAGGTTTAGTTACTGTA----------ATGTGTATACATACAGCAATTGC-AA--------AAGTGTCTTTGGaat-----------------------------------------------aa------ i saiBol1.JH378140 C 0 I 56 s cebCap1.NW_016107335v1 4926056 107 - 11686629 ACCTCCTTTAG--ATCCACTGTCAATTCTTTTC------------CAGAA-----TCTCTTAACTAAAAGGTTTAGTTACTGTA----------ATGTGTATACATACAGCAACTGC-AA--------AAACATCTTTGGAAT-----------------------------------------------AA------ i cebCap1.NW_016107335v1 C 0 I 64 s aotNan1.NW_018506100v1 3276601 107 - 4527795 ACCTCCTTTAG--ATCCACTGTCAATTATTTCC------------CAGAA-----TCTCGTAACTAAAAGGTTTAGTTACTGTA----------ATGTGTATACATACAGCAATTGT-AA--------AAATGTCTTTGGAAT-----------------------------------------------AA------ i aotNan1.NW_018506100v1 C 0 I 56 s otoGar3.GL873572 5494437 125 - 12253515 ACCTCCTTTAG--ATCCATTGCCA--TTCTTTCAAAAAAAAAAAGAAGAA-----TCATTTAATTAAAAGATTTACTTACTATAACTACTTGCTATATGTACACCTATAACAACTGC-----------AAATGTCTTTGGGAT-----------------------------------------------AA------ i otoGar3.GL873572 C 0 I 19 s canFam3.chr16 16064565 94 + 59632846 ACATCCTTTAGAAATCCAATGCCAAGTCTTTTT------------AAGAA-----A---AGGATTGAAAAATTAACTTAATAGA----------TCATG-ACTCAAAT-----TTGC-AT--------AACAGTCATAA----------------------------------------------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1234543 165 + 1922530 ACAGAATGTGA--ATCCACTGCTAGTACTTTCC------------AAGAAAAGAGTCAATTGACTAAAAGATTTAG-----GTA----------ATGTGTA---ATATAGTGTTAAC-AAAACGTTTTAAGTATCTGTTGGAAAATTTACATGAAGAGTTAACTAAATGGACAAGGACATGAATCTACATAACCAGAA i dasNov3.JH575209 I 298 C 0 e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=69318.000000 s hg38.chrUn_KI270746v1 62288 6 + 66486 AGACAT s panTro5.chr7 156359892 6 + 166211670 AGACAT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155972906 6 + 162613886 AGACAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 12067 6 + 12255 AGACAT i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102847212 6 + 110113093 AGACAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178463809 6 + 185818997 AGACAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184953550 6 + 192294377 AGACAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7922143 6 + 15219753 AGACAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9566330 6 + 11639508 AGACAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120417582 6 + 127223203 AGACAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543874 6 - 2854183 AGACAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250766 6 + 27496150 AGACAT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33703161 6 - 128169293 AGACAT i calJac3.chr8 I 56 C 0 s saiBol1.JH378140 17038809 6 + 19594188 AGATAT i saiBol1.JH378140 I 56 C 0 s aotNan1.NW_018506100v1 3276764 6 - 4527795 AGACAT i aotNan1.NW_018506100v1 I 56 C 0 s otoGar3.GL873572 5494581 6 - 12253515 GGACAG i otoGar3.GL873572 I 19 I 15 s canFam3.chr16 16064659 6 + 59632846 AAGCAT i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1234708 6 + 1922530 AGGCAT i dasNov3.JH575209 C 0 C 0 e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e cebCap1.NW_016107335v1 4926163 64 - 11686629 I a score=857772.000000 s hg38.chrUn_KI270746v1 62294 69 + 66486 TATC--------------TTATAACTC-AATCAAATTAGACAATATGAACATACTGCTTACCAGCAATGAGAAGACTATCTGTG s panTro5.chr7 156359898 69 + 166211670 TATC--------------TTGTAACTC-AATCAAATTAGACAATATGAACATACTGCTTACCAGCAATAAGAAGAGTATCTGTG i panTro5.chr7 C 0 I 6371 s panPan2.chr7 155972912 69 + 162613886 TATC--------------TTGTAACTC-AATCAAATTAGACAATATGAACATACTGCTTACCAGCAATAAGAAGACTATCTGTG i panPan2.chr7 C 0 I 6365 s gorGor5.CYUI01009314v1 12073 69 + 12255 TATC--------------TTATGACTC-AAACAAATTAGACAATATGAACATACTGCTTACCAGCAATGAGAAGACTATCTGTG i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102847218 69 + 110113093 TACC--------------TTATAACTC-AATCAAATCAGACAATACGAACATACTGCTTACCAGCAATGAGAAGACTGTCTGTG i nomLeu3.chr13 C 0 I 7163 s rheMac8.chr3 178463815 69 + 185818997 TATC--------------TTGTAACTC-AATCAAATTAGATAATATGAACATACTGCTTACCAGCAATGAGAAGACTATCTGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184953556 69 + 192294377 TATC--------------TTGTAACTC-AATCAAATTAGATAACATGAACATACTGCTTACCAGCAATGAGAAGACTATCTGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7922149 69 + 15219753 TATC--------------TTGTAACTC-AATCAAATTAGATAATATGAACATACTGCTTACCAGCAACGAGAAGACTATCTGTG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9566336 69 + 11639508 TATC--------------TTGTAACTC-AATCAAATTAGATAATATGAACATACTGCTTACCAGCAATGAGAAGACTATCTGTG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120417588 69 + 127223203 CATC--------------TTGTAACTC-AATCAAATTAGATAATATGAACATACTGCTTACCAGCAATGAGAAGACTATCTGTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1543880 69 - 2854183 TATC--------------TTGTAACTC-AATCAAATTAGATAATATGAACATACTGCTTACCAGCAATGAGAAGACTATCTGTG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20250772 69 + 27496150 TATC--------------TTGTAACTC-AACCAAATTAGATAATATGAACGTACTGCTTACCAGCAATGAGAAGACTATCTGTG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33703167 69 - 128169293 TATC--------------CTGTAACTC-AATCAAATCAGACAATATGAACATATTGCTTACCAGCAATAAAAAGACCATCTGTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17038815 69 + 19594188 TATC--------------TTGTAACTC-AATCAAATTAGACAATATGAACATATTGCTTACCAGCAATGAAAAGACCATCTGTG i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4926227 69 - 11686629 TATC--------------TTGCAACTC-AATCAAATTAGACAATATGAACATATTGCTTACCAGCAACGAAAAGACCATCTGTG i cebCap1.NW_016107335v1 I 64 C 0 s aotNan1.NW_018506100v1 3276770 69 - 4527795 TATC--------------TTGTAACTC-AATCAAATTAGACAATATGAACATATTGCTTACCAGCAATGAAAAGACCATCTGTG i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5494602 79 - 12253515 TAGCAACCATAAAGGCAATTATGATTC-AATCAAAT--GACACTAGAAACAT--TGCTCACCAGGAGTGAGAAGACCATCTGTG i otoGar3.GL873572 I 15 C 0 s canFam3.chr16 16064665 60 + 59632846 TATG--------------TTGTAACTC-AATCAAATTAGATAGTA---------TGCTTACCAGAAATGAGAAGACCATGTGTA i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1234714 67 + 1922530 TACT--------------TTGTAAAACTGATCAAATTTGAGAA---AGAATTATTGCTTACCAGAAATGAGAAGACCATCTGTG i dasNov3.JH575209 C 0 C 0 e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=32661.000000 s hg38.chrUn_KI270746v1 62363 2 + 66486 TC s panTro5.chr7 156366338 2 + 166211670 tc i panTro5.chr7 I 6371 C 0 s panPan2.chr7 155979346 2 + 162613886 tc i panPan2.chr7 I 6365 C 0 s gorGor5.CYUI01009314v1 12142 2 + 12255 TC i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102854450 2 + 110113093 tc i nomLeu3.chr13 I 7163 C 0 s rheMac8.chr3 178463884 2 + 185818997 TC i rheMac8.chr3 C 0 I 5438 s macFas5.chr3 184953625 2 + 192294377 TC i macFas5.chr3 C 0 I 5367 s macNem1.NW_012015910v1 7922218 2 + 15219753 TC i macNem1.NW_012015910v1 C 0 I 5437 s cerAty1.NW_012008583v1 9566405 2 + 11639508 TC i cerAty1.NW_012008583v1 C 0 I 5398 s chlSab2.chr21 120417657 2 + 127223203 TC i chlSab2.chr21 C 0 I 5534 s manLeu1.NW_012102765v1 1543949 2 - 2854183 TC i manLeu1.NW_012102765v1 C 0 I 6609 s colAng1.NW_012115154v1 20250841 2 + 27496150 TC i colAng1.NW_012115154v1 C 0 I 5433 s calJac3.chr8 33703236 2 - 128169293 TC i calJac3.chr8 C 0 I 6125 s saiBol1.JH378140 17038884 2 + 19594188 TC i saiBol1.JH378140 C 0 I 6022 s cebCap1.NW_016107335v1 4926296 2 - 11686629 TC i cebCap1.NW_016107335v1 C 0 I 6172 s aotNan1.NW_018506100v1 3276839 2 - 4527795 TC i aotNan1.NW_018506100v1 C 0 I 5817 s otoGar3.GL873572 5494681 2 - 12253515 TC i otoGar3.GL873572 C 0 I 6985 s canFam3.chr16 16064725 2 + 59632846 TC i canFam3.chr16 C 0 I 5045 s dasNov3.JH575209 1234781 2 + 1922530 TC i dasNov3.JH575209 C 0 I 7918 e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=2800.000000 s hg38.chrUn_KI270746v1 62365 1 + 66486 C s panTro5.chr7 156366340 1 + 166211670 c i panTro5.chr7 C 0 C 0 s panPan2.chr7 155979348 1 + 162613886 c i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 12144 1 + 12255 C i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102854452 1 + 110113093 c i nomLeu3.chr13 C 0 C 0 s saiBol1.JH378140 17044908 1 + 19594188 c i saiBol1.JH378140 I 6022 C 0 s cebCap1.NW_016107335v1 4932470 1 - 11686629 c i cebCap1.NW_016107335v1 I 6172 C 0 s aotNan1.NW_018506100v1 3282658 1 - 4527795 c i aotNan1.NW_018506100v1 I 5817 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e colAng1.NW_012115154v1 20250843 5433 + 27496150 I e manLeu1.NW_012102765v1 1543951 6609 - 2854183 I e chlSab2.chr21 120417659 5534 + 127223203 I e cerAty1.NW_012008583v1 9566407 5398 + 11639508 I e macNem1.NW_012015910v1 7922220 5437 + 15219753 I e rheMac8.chr3 178463886 5438 + 185818997 I e calJac3.chr8 33703238 6125 - 128169293 I e macFas5.chr3 184953627 5367 + 192294377 I a score=192212.000000 s hg38.chrUn_KI270746v1 62366 62 + 66486 TCTATACCCTCAGTGTAGGGAAAAGCTTTCTGAATATGACTCAAAAATCCAGAAGCAAAAGA s panTro5.chr7 156366341 62 + 166211670 tctataccctcagtgtagggaaaggctttctgaatatgactcaaaaatccagaagcaaaaga i panTro5.chr7 C 0 C 0 s panPan2.chr7 155979349 62 + 162613886 tctataccctcagtgtagggaaaggctttctgaatatgactcaaaaatccagaagcaaaaga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 12145 62 + 12255 TCTATACCCTCAGTGTAGGGAAAGGCTTTCTGAATATGACTCAAAAATCCAGAAGCAAAAGA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102854453 62 + 110113093 tctataacctcagtatagggaaaggctttctgaatatgactcaaaaatccagaagcaaaaga i nomLeu3.chr13 C 0 C 0 s calJac3.chr8 33709363 62 - 128169293 tctataacctcagtgaagggaaaggctttctgaatatgactcaaaaatccagaaacaataga i calJac3.chr8 I 6125 C 0 s saiBol1.JH378140 17044909 62 + 19594188 tctataacctcagtgaagggaaaggctttctgaatatgactcaaaaatccagaaacaataga i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4932471 62 - 11686629 tctataacctcagtgaggggaaaggctttctgaatatgactcaaaaatccagaaacaataga i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3282659 62 - 4527795 tctataacctcagtgaagggaaaggctttctgaatatgactcaaaaatccagaaacaataga i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e colAng1.NW_012115154v1 20250843 5433 + 27496150 I e manLeu1.NW_012102765v1 1543951 6609 - 2854183 I e chlSab2.chr21 120417659 5534 + 127223203 I e cerAty1.NW_012008583v1 9566407 5398 + 11639508 I e macNem1.NW_012015910v1 7922220 5437 + 15219753 I e rheMac8.chr3 178463886 5438 + 185818997 I e macFas5.chr3 184953627 5367 + 192294377 I a score=4095.000000 s hg38.chrUn_KI270746v1 62428 1 + 66486 A s panTro5.chr7 156366403 1 + 166211670 a i panTro5.chr7 C 0 C 0 s panPan2.chr7 155979411 1 + 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 12207 1 + 12255 A i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102854515 1 + 110113093 a i nomLeu3.chr13 C 0 C 0 s papAnu3.chr3 178077747 1 + 180432695 A i papAnu3.chr3 N 0 I 29 s calJac3.chr8 33709425 1 - 128169293 a i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17044971 1 + 19594188 a i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4932533 1 - 11686629 a i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3282721 1 - 4527795 a i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e colAng1.NW_012115154v1 20250843 5433 + 27496150 I e manLeu1.NW_012102765v1 1543951 6609 - 2854183 I e chlSab2.chr21 120417659 5534 + 127223203 I e cerAty1.NW_012008583v1 9566407 5398 + 11639508 I e macNem1.NW_012015910v1 7922220 5437 + 15219753 I e rheMac8.chr3 178463886 5438 + 185818997 I e macFas5.chr3 184953627 5367 + 192294377 I a score=55245.000000 s hg38.chrUn_KI270746v1 62429 29 + 66486 GATTAATAAATCTAACTCCACAA-AAAGAA s panTro5.chr7 156366404 30 + 166211670 gattaataaatctaactccataagaaagaa i panTro5.chr7 C 0 C 0 s panPan2.chr7 155979412 30 + 162613886 gattaataaatctaactccataagaaagaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 12208 29 + 12255 GATTAATAAATC-AACTCCATAAAAAAGAA i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102854516 30 + 110113093 gattaataaatctaactccataaaaaagaa i nomLeu3.chr13 C 0 C 0 s calJac3.chr8 33709426 24 - 128169293 gattaata-----aactccatagaaaaga- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17044972 24 + 19594188 gattaata-----aactccatagaaaaga- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4932534 24 - 11686629 gattaata-----aactCCATAGAAAAGA- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3282722 24 - 4527795 gattaata-----aactccatagaaaaga- i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e papAnu3.chr3 178077748 29 + 180432695 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e colAng1.NW_012115154v1 20250843 5433 + 27496150 I e manLeu1.NW_012102765v1 1543951 6609 - 2854183 I e chlSab2.chr21 120417659 5534 + 127223203 I e cerAty1.NW_012008583v1 9566407 5398 + 11639508 I e macNem1.NW_012015910v1 7922220 5437 + 15219753 I e rheMac8.chr3 178463886 5438 + 185818997 I e macFas5.chr3 184953627 5367 + 192294377 I a score=4095.000000 s hg38.chrUn_KI270746v1 62458 1 + 66486 A s panTro5.chr7 156366434 1 + 166211670 a i panTro5.chr7 C 0 C 0 s panPan2.chr7 155979442 1 + 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 12237 1 + 12255 A i gorGor5.CYUI01009314v1 C 0 C 0 s nomLeu3.chr13 102854546 1 + 110113093 a i nomLeu3.chr13 C 0 C 0 s papAnu3.chr3 178077777 1 + 180432695 A i papAnu3.chr3 I 29 N 0 s calJac3.chr8 33709450 1 - 128169293 a i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17044996 1 + 19594188 a i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4932558 1 - 11686629 A i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3282746 1 - 4527795 a i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e colAng1.NW_012115154v1 20250843 5433 + 27496150 I e manLeu1.NW_012102765v1 1543951 6609 - 2854183 I e chlSab2.chr21 120417659 5534 + 127223203 I e cerAty1.NW_012008583v1 9566407 5398 + 11639508 I e macNem1.NW_012015910v1 7922220 5437 + 15219753 I e rheMac8.chr3 178463886 5438 + 185818997 I e macFas5.chr3 184953627 5367 + 192294377 I a score=33234.000000 s hg38.chrUn_KI270746v1 62459 17 + 66486 CTTTTGCATGGCaaaa-a s panTro5.chr7 156366435 17 + 166211670 cttttgcatggcaaaa-a i panTro5.chr7 C 0 C 0 s panPan2.chr7 155979443 17 + 162613886 cttttgcatggcaaaa-a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01009314v1 12238 17 + 12255 CTTTTGCATGGCAAAA-A i gorGor5.CYUI01009314v1 C 0 N 0 s nomLeu3.chr13 102854547 17 + 110113093 cttttgcatggcaaaa-a i nomLeu3.chr13 C 0 I 1 s calJac3.chr8 33709451 18 - 128169293 actttgcatagccaagaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17044997 15 + 19594188 ac--tgcatagccaag-a i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4932559 17 - 11686629 ACTTTGCATAGCCAAG-A i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3282747 17 - 4527795 actttgcatagccaag-a i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e colAng1.NW_012115154v1 20250843 5433 + 27496150 I e manLeu1.NW_012102765v1 1543951 6609 - 2854183 I e chlSab2.chr21 120417659 5534 + 127223203 I e cerAty1.NW_012008583v1 9566407 5398 + 11639508 I e macNem1.NW_012015910v1 7922220 5437 + 15219753 I e rheMac8.chr3 178463886 5438 + 185818997 I e macFas5.chr3 184953627 5367 + 192294377 I a score=62147.000000 s hg38.chrUn_KI270746v1 62476 38 + 66486 aaaaaataataaaaacaaagtcaaaagacaCATAATAc s panTro5.chr7 156366452 37 + 166211670 aATAA-TAATAAAAACAAAGTCAAAAGACACATAATAc i panTro5.chr7 C 0 C 0 s panPan2.chr7 155979460 36 + 162613886 aaaa--taataaaaacaaagtcaaaagacaCATAATAc i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102854565 36 + 110113093 aaaa--taataaaaacaaagtcaaaagacaCATAATGc i nomLeu3.chr13 I 1 C 0 s calJac3.chr8 33709469 36 - 128169293 aaaa--aaataaaaacaaagtcaaaagacaaATAACAc i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17045012 32 + 19594188 aaaa--aaataa----aaagtcaaaagacaaATAACAc i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4932576 32 - 11686629 AAAA--AAATAA----AAAGTCAAAAGACAAATAACAc i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3282764 32 - 4527795 aaaa--aaataa----aaagtcaaaagacaaATAACAc i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e colAng1.NW_012115154v1 20250843 5433 + 27496150 I e manLeu1.NW_012102765v1 1543951 6609 - 2854183 I e chlSab2.chr21 120417659 5534 + 127223203 I e cerAty1.NW_012008583v1 9566407 5398 + 11639508 I e macNem1.NW_012015910v1 7922220 5437 + 15219753 I e rheMac8.chr3 178463886 5438 + 185818997 I e macFas5.chr3 184953627 5367 + 192294377 I a score=10330.000000 s hg38.chrUn_KI270746v1 62514 5 + 66486 agcct s panTro5.chr7 156366489 5 + 166211670 agcct i panTro5.chr7 C 0 C 0 s panPan2.chr7 155979496 5 + 162613886 agcct i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102854601 5 + 110113093 agcct i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184958994 5 + 192294377 agctg i macFas5.chr3 I 5367 C 0 s calJac3.chr8 33709505 5 - 128169293 agact i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17045044 5 + 19594188 agact i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4932608 5 - 11686629 agact i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3282796 5 - 4527795 agact i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e colAng1.NW_012115154v1 20250843 5433 + 27496150 I e manLeu1.NW_012102765v1 1543951 6609 - 2854183 I e chlSab2.chr21 120417659 5534 + 127223203 I e cerAty1.NW_012008583v1 9566407 5398 + 11639508 I e macNem1.NW_012015910v1 7922220 5437 + 15219753 I e rheMac8.chr3 178463886 5438 + 185818997 I a score=10509.000000 s hg38.chrUn_KI270746v1 62519 5 + 66486 ggata s panTro5.chr7 156366494 5 + 166211670 ggaca i panTro5.chr7 C 0 C 0 s panPan2.chr7 155979501 5 + 162613886 ggaca i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102854606 5 + 110113093 ggaca i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184958999 5 + 192294377 ggact i macFas5.chr3 C 0 C 0 s cerAty1.NW_012008583v1 9571805 5 + 11639508 ggatt i cerAty1.NW_012008583v1 I 5398 C 0 s calJac3.chr8 33709510 5 - 128169293 aggca i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17045049 5 + 19594188 aggca i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4932613 5 - 11686629 aggca i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3282801 5 - 4527795 gggca i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e colAng1.NW_012115154v1 20250843 5433 + 27496150 I e manLeu1.NW_012102765v1 1543951 6609 - 2854183 I e chlSab2.chr21 120417659 5534 + 127223203 I e macNem1.NW_012015910v1 7922220 5437 + 15219753 I e rheMac8.chr3 178463886 5438 + 185818997 I a score=6056329.000000 s hg38.chrUn_KI270746v1 62524 869 + 66486 acatggtgagaccctgtctctacaaaagtaaaaaattagctgggcttcgtggtacaca-taactcctagctaactcgggaggctgaggcaggaagattgcttgagcc--caggtcaaggc-tacagtgaactatgaccataccaatgtactatggccggggtgacagggtgagacactgtctcacacaaataagc---------------------aaaaaaaa---------------------aaaaaaaaaaaaaaaaaaaaaaaGCtagcagaaagtatctgcatcatgtaacacatataaagg-cttacatccctaacttataaagaactcttaaatttaggga---aaaatgccaaaatcttcaataacaggcaaaacacatgaacagacaattcatgagaagaaataaaaactgacccttaaacacatg-aaaaaacgatcgacttcactcttaggataaacaaaaattaaaactacattgatacactacttttaacccagaagacagacaaacattcaaaagctaaacaagtcatcctgttagcaaagacgta-ggaaaagttctctcacacatctctggtggcaatgcaaagtaccataagccccaaaaaagggaatttcacagtatctaacaaagctacatatgtgtacactcctgaggcaat-aatccta------ggaatttaccctacagatttgtccctgagaattcaaaaacacacatgcacaaagccagggagtgtaaaatcatttataatgcaaaatatcataaactactgaaataccaaagcacaggccactggttaagtaaccgatagcacagatacacaatggagtgctatgcagctgtttaaaaggagaatgagatctcttgaacttgcctaacttgcctggaagtgatttccagattttattacat s panTro5.chr7 156366499 863 + 166211670 acatagtgagaccctgtctctataaaagtaaaaaattagctgggcttggtggtacaca-taactcctagctaactcgggaggctgaggcaggaagactgcttgagcc--caggtcaaggc-tacagtgaactatgaccataccactgtactatggccggggtgatggagtgagacactgtctcacacaaataagc---------------------aaaaaaaa---------------------caagaacaaaTAA----------GCtggcagaaagtatctgcatcatgtaacacagataaaag-cttacatccctaacctataaagaactcttaaatttagggg---aaaatgccaaaatcttcaataacaggcaaaacacatgaacagacaattcacgagaagaaataaaaactgacccttaaacacatg-aaaaaacgatcaacttcactc--aggataaacaaaaattaaaactacactgatacaccacttttcgcccagaagacagacaaacattcaaaagctgaacaagtcatcctgttagcgaagacgta-agaaaagttctctcacacatctctggtggcaatgcaaagtaccataagccccaagaaagggaatctgacagtatctaacaaagctacatatgtgtacactcctgaggcaat-aatcctacttctaggaatttaccctacagatttgtccctgagaattcaaaaacacacatgcacaaagctagggagtgtaaaatcatttataatgcaaaatatcgtaaactactgaaataccaaagcacaggccattggttgagtaacccatagcacagatacacaatggagtgctatgcagctgtttaaaaggagaatgagatctcttgaacttgcctaacttgcctggaagtgatttccagattttattacac i panTro5.chr7 C 0 C 0 s panPan2.chr7 155979506 862 + 162613886 acatagtgagaccctgtctctataaaagtaaaaaattagctgggcttggtggtacaca-taactcctagctaactcgggaggctgaggcaggaagactgcttgagcc--caggtcaaggc-tacagtgaactatgaccataccactgtactatggccggggtgatggagtgagacactgtctcacacaaataagc----------------------aaaaaaa---------------------caagaacaaaTAA----------GCtggcagaaagtatctgcatcatgtaacacagataaaag-cttacatccctaacctataaagaactcttaaatttagggg---aaaatgccaaaatcttcaataacaggcaaaacacatgaacagacaattcacgagaagaaataaaaactgacccttaaacacatg-aaaaaacgatcaacttcactc--aggataaacaaaaattaaaactacactgatacaccacttttcgcccagaagacagacaaacattcaaaagctgaacaagtcatcctgttagcgaagacgta-agaaaagttctctcacacatctctggtggcaatgcaaagtaccataagccccaagaaagggaatctgacagtatctaacaaagctacatatgtgtacactcctgaggcaat-aatcctacttctaggaatttaccctacagatttgtccctgagaattcaaaaacacacatgcacaaagctagggagtgtaaaatcatttataatgcaaaatatcgtaaactactgaaataccaaagcacaggccattggttgagtaacccatagcacacatacacaatggagtgctatgcagctgtttaaaaggagaatgagatctcttgaacttgcctaacttgcctggaagtgatttccagattttattacac i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102854611 861 + 110113093 acatagtgagaccctgtctctacaaaactaaaaaattagctgggcttggtggtacaca-taactcctagctaactcgggaggctgaggcaggaagattgcttgagcc--caggtcaagac-tacagtgagctatgaccataccactgtactatggccggggcgacagggtgagacactgtctcacacaaataagc-------------------aaaaaaaaaa---------------------caagaaCAAATAA----------GCtagcagaaaatatctgcatcatgtaacacagataaaggccttacatccctaacttataaagaactcttaaatttaggga---aaaatgccaaaatcttcaataacaggcaaaacatatgaacagacaattcacgagaagaaat---aactgacccttaaacacatg-agaaaacgatcaacttcactcttaggataaacaaaaattaaaactacattgatacaccactttttacccaga----agacaaacattcaaaagctgaacaagtcatcctgttagcaaagacgta-ggaaaagttctctcacacatctctgttggcaatgcaaagtaccataagccccaagaaagggaatttgacagtatctaacaaagctacatatgtgtacactcctgaggcaat-aatcctacttctaggaatttaccctacagatttgtccttgagaattcaaaaacacacatgcacaaagctagggagtgtaaaatcatttataatgcaaaatatcgtaaacttctgaaataccaaagcacaggccattggttgagtaacccatagcacagatacacaatggagtgctatgcagctgtttaaaaggagaacgagatctcctgaacttgcctaacttgcctggaagtgatttccagattttattacat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178469324 874 + 185818997 acatagtgagaccctgtctctacaaaagcaaaaaattagctgggcttggtggtacaca-taactcctagctaactcgggaggctgaggcaggaagattgcttgagcc--caggtcaaggc-tacagcgagctatgaccatactactgtactatggcctgggagacagggtgagacactgtctcaaacaaataagc----------------aaaaaaaaaaaaa---------------------aaaGAACAAataa----------actagcagaaaatatttgcatcatgtaacacagatgaaggccttacatccctaacttataaagaactcttaaatttaggggaaaaaaatgccaaaatcttcaaaaacaggcaaaacacatgaacagacaattcacgagaaggaataaaaactgacccttaaacacatg-gaaaaacgatcaacttcactcttaggagaaacaaaaattaaaactacattgatataccacttttcacccagaagacaggcaaacattcaaaagctgaacaagtcatcctgttagcaaagatgta-ggaaaagttctctcatacatctctagtagcaatgcaaagtaccataagccccaagaaaggaaatttgacagtttctaacaaagctacgtatgcgtacactcctgagacaat-aatcctacttctaggaatttaccctatagatttgtccctgagaattcaaaaatacatatgcacaaagctatggactgtaaaatcatttataatgcaaaatattgtaaactatcaaaataccaaagcacaggccactggttgagtaacccatagcacagatacacagtggagtgctatgcagttgtttaaaagcagaatgagatctcttgaacttgcctaacttgcctggaagtgatttccagattttattacat i rheMac8.chr3 I 5438 C 0 s macFas5.chr3 184959004 874 + 192294377 acatagtgagaccctgtctctacaaaagcaaaaaattagctgggcttggtggtacaca-taactcctagctaactcgggaggctgaggcaggaagattgcttgagcc--caggtcaaggc-tacagcgagctatgaccatactactgtactatggcctgggagacagggtgagacactgtctcaaacaaataagc----------------aaaaaaaaaaaaa---------------------aaaGAACAAataa----------actagcagaaaatatttgcatcatgtaacacagatgaaggccttacatccctaacttataaagatctcttaaatttaggggaaaaaaatgccaaaatcttcaaaaacaggcaaaacacatgaacagacaattcacaagaaggaataaaaactgacccttaaacacacg-gaaaaacgatcaacttcactcttaggagaaacaaaaattaaaactacattgatataccacttttcacccagaagacaggcaaacattcaaaagctgaacaagtcatcctgttagcaaagatgta-ggaaaagttctctcatacatctctagtagcaatgcaaagtaccataagccccaagaaaggaaatttgacagtttctaacaaagctacatatgcgtacactcctgagacaat-aatcctacttctaggaatttaccctatagatttgtccctgagaattcaaaaatacatatgcacaaagctatggactgtaaaatcatttataatgcaaaatattgtaaactatcaaaataccaaagcacaggccactggttgagtaacccatagcacagatacacagtggagtgctatgcagttgtttaaaagcagaatgagatctcttgaacttgcctaacttgcctggaagtgatttccagattttattacat i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7927657 890 + 15219753 acatagtgagaccctgtctctacaaaagcaaaaaattagctgggcttggtggtacaca-taactcctagctaactcgggaggctgaggcaggaagattgcttgagcc--caggtcaaggc-tacagcgagctatgaccatactactgtactatggcctgggagacagggtgagacactgtctcaaacaaataagcaaaaaaaaaaaaaaaaaaaaaaaaaaaaa---------------------aaagaacaaataa----------actagcagaaaatatttgcatcatgtaacacagatgaaggccttacatccctaacttataaagaactcttaaatttaggggaaaaaaatgccaaaatcttcaaaaacaggcaaaacacatgaacagacaattcacgagaaggaataaaaactgacccttaaacacatg-gaaaaacgatcaacttcactcttaggagaaacaaaaattaaaactacattgatataccacttttcacccagaagacaggcaaacattcaaaagctgaacaagtcatcctgttagcaaagatgta-ggaaaagttctctcatacatctctagtagcaatgcaaagtaccataagccccaagaaaggaaatttgacagtttctaacaaagctacatatgcgtacactcctgagacaat-aatcctacttctaggaatttaccctatagatttgtccctgagaattcaaaaatacatatgcacaaagctatagactgtaaaatcatttataatgcaaaatattgtaaactatcaaaataccaaagcacaggccactggttgagtaacccatagcacagatacacagtggagtgctatgcagttgtttaaaagcagaatgagatctcttgaacttgcctaacttgcctggaagtgatttccagattttattacat i macNem1.NW_012015910v1 I 5437 C 0 s cerAty1.NW_012008583v1 9571810 873 + 11639508 acatagtgagaccctgtctctacaaaagcaaaaaattagctgggcttggtggtacaca-taactcctagctaacttgggaggctgaggcaggaagattgcttgagcc--caggtcaaggc-tacagcgagctatgaccatactactgtactatggcctgggagacagggtgagacactgtctcaaacaaataagc-----------------aaaaaaaaaaaa---------------------aaagaaCAAataa----------actagcagaaaatatttgcatcatgtaacacagatgaaggccttacatccctaacgtataaagaactcttaaatttaggggaaaaaaatgccaaaatcttcaaaaacaggcaaaacacatgaacagacaattcacgagaaggaataaaaactgacccttaaacacatg-gaaaaacgatcaacttcactcttaggagaaacaaaaattaaaactacattgatataccacttttcacccagaagacaggcaaacattcaaaagctgaacaagtcatcctgttagcaaagatgta-ggaaaagttctctcatacatctctagtggcaatgcaaagtaccataacccccaagaaagagaatttgacagtttctaacaaagctacatatgcgtacagtcctgagacaat-aatcctacttctaggaatttaccctatagatttgtccctgagaattcaaaaatacatatgcacaaagctatggactgtaaaatcatttataatgcaaaatattgtaaactatcaaaataccaaagcacaggccactggttgagtaacccatagcacagatacacagtggagtgctatgcagttgtttaaaagcagaatgagatctcttgaacttgcctaacttgcctgaaagtgatttccagattttattacat i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120423193 872 + 127223203 acatagtgagaccctgtctctacaaaagcaaaaaattagctgggcttggtggtacaca-taactcctagctaactcgggaggctgaggcaggaagattgcttgagcc--caggtcaaggc-tacagcgagctatgaccatactactgtactatggcctgggagacagggtgagacactgtctcaaacaaataagc------------------aaaaaaaaaaa---------------------aaagaaCAAataa----------actagcagaaaatatttgcatcatgtaacacagatgaaggccttacatacctaacttataaagaactcttaaatttaggggaaaaaaatgccaaaatcttcaataacaggcaaaacacatgaacagacaattcacgagaaggaataaaaactgacccttaaacacatg-gaaaaacgatcaacttcactcttaggagaaacaaaaattaaaactacattgatataccacttttcacccagaagacaggcaaatattcaaaagctgaacaagtcatcctgttagcaaagatgta-ggaaaagttctctcatacatctctagtagcaatgcaaagtaccataagccccaagaaagggaatttgacagtttctaacaaagctacatatgtatacactgctgagacaat-aatcctacttctaggaatttaccctatagatttgtccctgagaattcaaaaatacatatgcacaaagctatggactgtaaaatcatttataatgcaaaatattgtaaactatcaaaataccaaagcacaggccattggttgagtaacccatagcacagatacacaatggagtgctatgcggttgtttaaaagcagaatgagatctcttgaacttgcctaacttgcctggaagtgatttccagattttattacat i chlSab2.chr21 I 5534 C 0 s colAng1.NW_012115154v1 20256276 873 + 27496150 acatagtgagaccctgtctctacaaaagcaaaaaattagctgggcttgatggtacacattaactcctagctaactcaggaggctgaggcaggaagattgcttgagcc--caggtcaaggt-tacagcgagctatgaccataccactgtattatggcctgggagacagggtgagacactgtctcaaacaagtaagt-----------------taaaaaaaaaaa---------------------aaagaaCAAataa----------actagcagaaaatatttgcatcatgtaacacagatgaaggccttatatctctaacttataaataactcttaaatttagggggaaaaaatgccaaaatcttcaataacaggcaaaacacatgaacagacaattcacgagaaggaataaaaactgacccttaaacacacg-gaaaaatgatcaacttcactcttacgagaaacaaaaattaaaactacattgacataccacttttcacccagaagacaggcaaacattcaaaagctgaacaagtcatcctgttagcaaagatgtagggaaaagttctctcatacatctctagtggcaatgcaaagtaccataagccccaagaaagggaatttgacagtatctaacaaagctacatatgtgtacactcctgagacaat-aatcctacttctaggaatttaccctatagatttgtccctgagaattcaaaaatacatatgcacaaagctatagactgtaaaatcatttataatgcaaaatattgtaaactatcaaaataccaaagcacaggccattggttgagtaacccatagcacagatacacaatggagtgctatgcagttgtttaaaagcagaatgagatctcttgaacttgcctaacttgcc-agaagtga-ttccaaatagtattgcat i colAng1.NW_012115154v1 I 5433 C 0 s calJac3.chr8 33709515 846 - 128169293 acatagtgagaccctgcctctacgaaagt-aaaaattagccgggctcggtggtgtaca-taagtcctagctaacacgggaggctgaggcaagaagactgctagaaccttcaggtcaaggcttacagtgagctatgaccacaccaccctactacagcctgggtgatagggtgagacactgtctcaaacaaaccaac------------------aaaagaacaaa----------------------------TAATAA----------Gatggcagaaaatatttggatcatataacacagacaaaggccttacatacctaacttatacagaactcttaaatttaggaa---gaaacaccaaaatcttcaataacaggcaaaacacgtgaacagacaattcacgagaagaaa----aactga--cttaaacacatgaaaaaaatggtcaacttcactcttatgaaaaacaaaaattaa----a-actgatacaccatttttcacccagaagacaggcaaccattcaaaagctgagcaagttatcctgtttgcaaagatgca-ggaaaagttttctcatatacctctggtggcaaggcaaagtaccataagccccatgaaacaaactttgacagtatctaacaaagctacatatgcatacactcctgaggcagtaaatcctacttctgggaatttatcctatagatctgtccccaagaattcaaaaacacatatgaacaaagttatagactctaaaatcatttataatgcaaaatattgtaaactactgaaacatccgagcataggccattggctgagtaacccacagcacagatacactatggagtactatgcagctgtttaaaaggagaaggcgatctcttgaacttgcct---------ggaagtgatttccagattttattacat i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17045054 856 + 19594188 acatagtgagaccctgtctctacgaaagt--aaaattatctgggctcagtggtataca-taagtcctagctaatacgggaggctggggcaagaagattgcttgagcc-------caaggc-tacagtgagctatgacca--------tactacagcctgggtgatagggtgagacactgtctcaaacgaagaaga------------------agaagaaagaaagaagaaagaagaaagaagaagaaggagaaataa----------actagcagaaaatatttgcatcgtgtaacacagataaaggccttacacacctaacttatatagaactcttaaatttaggaa---gaaacactaaaatcttc-ataacaggcaaaacacgtgaacagacaattcac---aagaaa----aactga--cttaaacacatg-aaaaaatggtcaacttcactcttatgagaaacaaaaattaaaacta-actgacacatcatttttcacccagaagacaggcaaccattcaaaagctgagcaagttatcctgttggcaaagatgca-ggaaaagttttctcatacatctctggtggcaatgcaaagtaccataagccccacgaaacaaaatttgacagtatctaacaaagttacagatgcatacactcctgaagcagtaaatcctacttccaggaatttatcccatagatttgtccccaagaattcaaaaatacacatgaacaaagttacaaactgtaaaatcatttataatgcaaagtactgtaaactactgaaacatccaagcacaggccactggttgagtaacccacagcacagatgtactatggagtactacgcagctgtttaaaaggagaaggcgatctcctgaacttgcct---------ggaagtgatttccagattttattacat i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4932618 856 - 11686629 acatagtgagaccctgtctctacgaaagtaaaaaaatagctaggctcagtggtataca-taagtcctagctaatacgggaggctgaggcaagaagattgcttgagccttcaggtcaaggc-tacagtgagctatgaccataccactctactacagcctgggtgatagggtgagacactgtctcaaacaaaaacaa------------------aaacaaaaaaa---------------------gaaCATATAATAA----------ACTAGCAGAAAATATCTGCATCATGTAACACAGATAAAGGCcttacatacctaacttatacagaactcttaaatttaggaa---gaaataccaaaatcttcaataacaggcgaaacacgtgaacagacaattcatgagacgaaa----aactga--cttaaacacatgaaaaaaatggtcaacttcactcttatgagaaacaaaaattaaaacta-attgatacaccatttttcacccagaagacagggaaccattcaaaagctgagcaagttatcccgttggcaaagatgca-ggaaaagttttctcatacatctctggtggcaatgcaaagtaccttaagccccacgaaacaaaatttgacagtatctaacaaagcaacatatgcatacactcctgaagcagtaaatcctacttccagg-atttatcctatagatttgtccccaagaattcaaaaacacatatgaacaaagttacagattataaaatcatttataatgcaaaatattgtaaactactgaaacatccaagcacaggccactggttgagtaacccatagcacagatacactatggagtactatgcagctgtttaaaaggagaaggtgatctcttgaacttgcct---------ggaagtgatttccagattttattacat i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3282806 871 - 4527795 acatagtgagatcctgtctctacggaagtaaaaaattagctgggctcggtggtataca-taagtcctagctaatatgggaggctgaggcaagaagattgcttgagccttcaggtcaaggc-tacagtgagctatgaccataccactctactacagcctgggtgatagggtgagacactgtgtcaaacaaataaac------------------aaaacaaaaca----aaacaacaacaaaaaaagaacaaaTAATAA----------ACTAGCAGAAAATATTTGCATCATGTAACACAGATAAAGGCcttacatacctaacttacacag-actcttaaatttatgaa---gaaacaccaaaatcttcaataacaggcaaaacacgtgaacagacaattcacgagaataaa----aactga--cttaaacacatgaaaaaaatggtcaacttcactcttatgagaaacaaaaattaaaacta-actgatacaccatttttcacccagaagacaggcaaccattcaaaagctgagcaaattatcctgttggcaaagatgca-ggaaaagttttctcatacatctctggtggcaatgcaaagtaccataagccccatgaaacaaaatttgacagtatctaacaaagctac--atgcatacactcctgaagcagtaaatcctacttctaggaatttatcctatagatttgtccccaagaattcaaaaacacatatgaacaaagttatagactgtaaaatcatttataatgcaaaatattgtaaactactgaaacatccaagcacaggctattggttgagtaacccatagcacagatacaccatggagtactatgcagctgtttaaaaggagaaggtgatctcttgaacttgcct---------gtaagtgatttccagattttattacat i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e manLeu1.NW_012102765v1 1543951 6609 - 2854183 I a score=3985774.000000 s hg38.chrUn_KI270746v1 63393 478 + 66486 gaaaaaagcaacatgcaaaagaacatatacaacatgctaccttcactgaaa----gagcaatatatcctcttattcttagatgaaaaat----aacaggaggtttaaaacagaaaacaatgaagttagttacttccaagaggctgggggaaat-gcggTATAAGTAATAAACAAGAGACAGTGACAATTCTGAGCAAAAT--TTCATATAGTTTTGA-------AAGTATACTAATACCTTCTATATTTAAAAAATTAAATCACTAAGAAAA---AGGGGAATAAAATCTATTACTGAGAGCAAACTGAAGCAGACTTGCTTTTTAgattgagcaactgaataaatgtgctg----ttctacaacccagtatttttattgtagaagaacagacatgcaagaatgaaaaggcaaataactcagtggagaaggataagaactggaggtgctggtataaattcattatttctaagt--tatgtatatg------tatatga--atatttatgtata s panTro5.chr7 156367362 495 + 166211670 gaaaaaagcaacatgcaaaagaacatatacaacatgctaccttcactgaaaataagagcaatatatcttcttattcttagacgaaaaat----aacaggaggtttaaaacagaaaacaatgaagttagttacttccaagaggttgggggaaat-ggggtataaataataaacaagaggcagtgacaattctgagtaaaac--ttcatatagttttgag-tttggaagtatactaatatcttctatatttaaaaaattaaatcaCTAAGAAAAGAAAGGGGAATAAAATCTATTACTGAGAGCAAACTGAAGCAGACTTGCTTTTTAgattgagcaactgaataaatgtgctgatattgctacaacccagaatttttattgtagaagaacagacatgcaagaatgagaaggcaaagaattcagtggagaaggacaagaactggaggtactggtgtaaattcattatttctaagt--tatgtatatg------tatatga--atatttatgtgta i panTro5.chr7 C 0 C 0 s panPan2.chr7 155980368 495 + 162613886 gaaaaaagcaacatgcaaaagaacatatacaacatgctaccttcactgaaaataagagcaatatatcttcttattcttagacgaaaaat----aacaggaggtttaaaacagaaaacaatgaagttagttacttccaagaggttggggaaaat-ggggtataaataataaacaagaggcagtgacaattctgagtaaaac--ttcatatagttttgag-tttggaagtatactaatatcttctatatttaaaaaattaaatcaCTAAGAAAAGAAAGGGGAATAAAATCTATTACTGAGAGCAAACTGAAGCAGACTTGCTTTTTAgattgagcaactgaataaatgtgctgatattgctacaatccagaatttttattgtagaagaacagacatgcaagaatgagaaggcaaagaattcagtggagaaggacaagaactggaggtactggtgtaaattcattatttctaagt--tatgtatatg------tatatga--atatttatgtgta i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102855472 492 + 110113093 gaaaaaagcaacatgcaaaagaacatatacaacatgctaccttgactgaaagtaagagcaacacatcttcttattcttagacgaaaaat----agcaggaggtttaaaacagaaaacaatgaagttagttacttccaagaggttgggggaaat-ggggtacaagtaataaacaagaagcagtgataattctgagtaaaac--tttatataactttgagttttgaaagtatactaatatcttctatatttaaaaaattaaatcaCTAAGAAA----AGGGGAATAAAATCTATTACTGAGAGCAAACTGAAGCAGATTTGCTTTTTAgattgagcaactgaataaatgtgctgaagttgctacaacccagaatttttattgtagaagaacagacatgtaagaatgagaaggcaaagaactcagaggagaaggataagaactggaggtactggtgtaaattcattatttctaagt--tatgtatatg------tatatGA--ATATTTATGTGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178470198 496 + 185818997 gaaaacagcaacatgcaaaagaacatatacaacatgctaccttcagtgaaagtaagagcaatatatc------ttcttagaggaaaaat----aacaggaagtttaaaacagaaaacaatgaagttagttacctccaagaggttgaaggaaat-ggggtataagtaataaacaagaggcagtgacaattctgagcaaaac--tttatatagctttgagttttgaaagtatactaatatcttctatatttaaaaaattaaatcaCTAAGAAAAGAAAGGGGAATAAAATCTATTACTGAGAGCAAACTGAAGCAGATTTGTTTTTTAGatggagcaactgaataaatgtgctgacgttgctgcaacccagaatttttattgtagaagaacagacatgcaagaatgagaaggcaaagaactcagtggagaaggataagaactgggggtactggtgtaaattcattatttctaagt--tatgtatatgtaagggtatatga--atatttatgtgta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184959878 485 + 192294377 gaaaacagcaacatgcaaaagaacatatacaacatgctaccttcagtgaaagtaagagcaatatatc------ttcttagaggaaaaat----aacaggaagtttaaaacagaaaacaatgaagttagttacctccaagaggttgaaggaaat-ggggtataagtaataaacaagaggcagtgacaattctgagcaaaac--tttatatagctttgagttttgaaagtatactaatatcttctatatttaaaaaattaaatcactaaGAAAAGAAAGGGGAATAAAATCTATTACTGAGAGCAAACTGAAGCAGATTTGCTTTTTAgatggagcaactgaataaatgtgctgacgttgctgcaacccagaatttttattgtagaagaacagacatgcaagaatgagaaggcaaagaactcagtggagaaggataagaactgggggtactggtgtaaattcattatttctaa-------------gtaagggtatatga--atatttatgtgta i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7928547 496 + 15219753 gaaaacagcaacatgcaaaagaacatatacaacatgctaccttcagtgaaagtaagagcaatatatc------ttcttagaggaaaaat----aacaggaagtttaaaacagaaaacaatgaagttagttacctccaagaggttgaaggaaat-ggggtataagtaataaacaagaggcagtgacaattctgagtaaaac--tttatacagctttgagttttgaaagtatactaatatcttctatatttaaaaaattaaatcaCTAAGAAAAGAAAGGGGAATAAAATCTATTACTGAGAGCAAACTGAAGCAGATTTGCTTTTTAGatggagcaactgaataaatgtgctgacgttgctgcaacccagaatttttattgtagaagaacagacatgcaagaatgagaaggcaaagaactcagtggagaaggataagaactgggggtactggtgtaaattcattatttctaagt--tatgtatatgtaagggtatatga--atatttatgtgta i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9572683 502 + 11639508 gaaaacagcaacatgcaaaagaacatatacaacatgctaccttcagtgaaagtaagagcaatatatcttcttattcttagaggaaaaat----tacaggaagtttaaaacagaaaacaatgaagttagttacctccaagaggttgaaggaaat-ggggtataagtaataaacaagaggcagtgacaattctgagtaaaac--tttatatagctttgagttttgaaagtatactaatatcttctatatttaaaaaattaaatcaCTAAGAAAAGAAAGGGGAATAAAATCTATTACTGAGAGCAAACTGAAGCAGATTTGCTTTTAAGatggagcaactgaataaatgtgctgacgttgctgcaacccagaatttttattgtagaagaacagacatgcaagaatgagaaggcaaagaactcagtggagaaggataagaactggaggtactggtgtaaattcattatttctaagt--tatgtatatgtaaggatatatga--atatttatgtgta i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120424065 502 + 127223203 gaaaacagcaacatgcaaaagaacatatacaacatgctaccttcagtgaaagtaagagcaatatatcttcttattcttagaggaaaaat----aacaggaagtttaaaacagaaaacaatgaagttagttacctccaagaagttgaaggaaat-ggggtataagtaataaacaagaggcagtgacaattctgagtaaaac--tttacatagctttgagttttgaaagtatactaatatcttctatatttaaaaaattaaatcactaaGAAAAGAAAGGGGAATAAAATCTATTACAGAGAGCAAACTGAAGCAGATTTGGTTTTTAgatggagcaactgaataaatgtgctgacgttgctgcaactcagaatttttattgtagaagaacagacatgcaagaatgagaaggcaaagaactcagtggagaagggtaagaactggaggtactggtgtaaattcattatttctaagt--tatgtatatgtaagggtatatga--atatttatgtgta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1550560 502 - 2854183 gaaaacagcaacatgcaaaagaacatatacaacatgctaccttcagtgaaagtaagagcaatatatcttcttattcttagaggaaaaat----aacaggaagtttaaaacagaaaacaatgaagttagttacctccaagaggttgaaggaaat-ggggtataagtaataaacaagaggcagtgacaattctgagtaaaac--tttatatagctttgagttttgaaagtatactaatatcttctatatttaaaaaattaaatcactaaGAAAAGAAAGGGGAATAAAATCTATTACTGAGAGCAAACTGAAGCAGATTTGCTTTTTAGatggagcaactgaataaatgtgctgacgttgctgcaacccagaatttttattgtagaagaacagacatgcaagaatgagaaggcaaagaactcaggggagaaggataagaactggaggtaccggtgtaaattcattatttctaagt--tatgtatatgtaagggtatatga--atatttatgtgta i manLeu1.NW_012102765v1 I 6609 C 0 s colAng1.NW_012115154v1 20257149 503 + 27496150 gaaaacagcaacatgcaaaagaacatatacaacatgctaccttcagtgaaagtaagagcaatatatcttcttattcttagaggaaaaat----aacaggaagtttaaaacagaaaacaatgaagttagttacctccaagaggttgagggaaatgggggtgtaagtaaaaaacaagaggcagtgacaattctgagtaaaac--tttatatagctttgagttttgaaagtatactaatatcttctatatttaaaaaatcaaatcactaaGAAAAGAAAGGGGAATAAAATCTATTACTGAGAGCAAACTGAAGCAGATTTGCTTTTTAgattgagcaactgaataaatgtgctgacattgctgcaacccagaatttttattgtagaagaacagacatgcaagaatgagaaggcaaagaactcagtggagaagggtaagaactggaggtactggtgtaaattcattatttctaagt--tatgcatatgtaaggatatatga--atatttatgtgta i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33710361 484 - 128169293 gaaaaaagcaacatgcaaaagagcatatacaacatgctacc-----tgaaagtaagagaaatatatc------ttcttagagggaaaataaacaacaggaagcttaaaccagaaaacaatgaagttagttacttccaagaggttg-ggaaaat-ggcacataggtgataaacaaaaggcagtgacaattctgagtaaaac--tttatatagctttaacttttgaaagtatactaatatgttctatatttaaaaattaaaACCAT------AAGAAAGGGGAGCAAAATCTATTACTGAGGGCAAACTACAGCAGATTTGCTTGTTAgattgagctactgaatacatgtgctgatgctgctgcaacccagaatttttactgtataagaacagacatgcaagaatgacaaggcaaagaattcagtggagaaagagaagaaccggaggtaccggtgtaaattcattatttctaagttatatatatatgtatgcatatatgaatatatt-------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17045910 470 + 19594188 gagaaaagcaacatgcaaaagagcatatgcaacatgctgcc-----tgaaagtaagagaaatatatc------ttcttagaggaaaaataaacaacaggaagcttaaaccagaaaacaacgaagttagttactttcaagaggttg-gggaaat-ggggtgtaagtgat----aaaaggcagtgacaattctgagtaaaactttttatatagctttgactttctaaagtatactaatatcttctatatttaaaaattaaaACCAT------AAGAAAGGGGAATAAAATCTATTACTGAGGGCAAACTAAAGCAGATTTGCTTTTTAGATTGAGCAACTGAATACATGT--------TGCTGCAACCCAGAATTTTTATTGTATAACGGCAGACATGCAAGAATGACAAAGCAAAgaactctgtggagaaggataagaactggaggtactggtgtaaattcattatttctaagt--tacatatatgtatgcatacataa--atatt-------- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4933474 490 - 11686629 gaaaaaagcaacatgcaaaagagcatacacaacatgctacc-----tgaaagtaagagaaatatatc------ttcttagaggaaaaataaataacaggaagcttaaaccagaaaacaatgaagttagttactttcaagaggctg-gggaaat-ggggcataagtgataaacaaaaggcagtgacaattctgagtaaaactttttatatagctttgacttttgaaagtatactaatatcttctatatttaaaaattaaaACCAT------AAGAAAGGGGAATAAAATCTATTACTGAGGGCAAACTAAATCAGATTTGCTTTTTAgactgagcaactgaatacatgtgctgatgctgctgcaacccagaatttttattgtataagaacagacacgcaggaatgacaaggcaaagaattctgtggagaaggataagaactggaggtactggcataaattcattatttctgagt--tacacatatgtatgcatacataa--atatttatatgta i cebCap1.NW_016107335v1 C 0 I 8 s aotNan1.NW_018506100v1 3283677 490 - 4527795 gaaaaaagcaacatgcaaaagagcatatacaacatgctacc-----tgaaagtaagagaaatatatc------ttcttagaggaaaaataaacaacaggaagcttcaaccagaaaacaatgaagttagttactttcaagagattg-gggaaat-ggggcatacgtgataaacaaaaggcagtgacaattctgagtaaaactttttatatagctttgacttttgaaagtatactaatatcttctatatttaaaaattaaaACCAT------AAGAAAGGGGAATAAAATCTATTACTGAGGGCAAACTAACGCAGATTTGCTTTTTAgattgagcaactgaatacatgtgctgatgttgctgcaacccagaatttttactgtgtaagaacagacacgcaagaatgacaagaaaaagaactcagtggagaaggataagaactggaggtactggtgtaaattcattatttctaagt--tatatatgcatatgcatatatga--atatttatatgta i aotNan1.NW_018506100v1 C 0 I 8 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I a score=11455.000000 s hg38.chrUn_KI270746v1 63871 10 + 66486 tatacataac- s panTro5.chr7 156367857 10 + 166211670 tatatgttaa- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155980863 10 + 162613886 tatacgttaa- i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102855964 9 + 110113093 TATATGT-AA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178470694 9 + 185818997 caaatgg-aa- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184960363 9 + 192294377 caaatgg-aa- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929043 9 + 15219753 caaatgg-aa- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9573185 9 + 11639508 caaacgg-aa- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120424567 9 + 127223203 caaatgg-aa- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1551062 9 - 2854183 caaacgg-aa- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20257652 9 + 27496150 caaatgg-aa- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33710845 10 - 128169293 tatatgt-aac i calJac3.chr8 C 0 I 6 s saiBol1.JH378140 17046380 10 + 19594188 tatatgt-aac i saiBol1.JH378140 C 0 I 6 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e aotNan1.NW_018506100v1 3284167 8 - 4527795 I e cebCap1.NW_016107335v1 4933964 8 - 11686629 I a score=680226.000000 s hg38.chrUn_KI270746v1 63881 81 + 66486 gtgtaggggtgttcaatcttttggctt-tcctggaccacattgaaagaagaa---tcgtcttgggccacacacaagatacattaa s panTro5.chr7 156367867 84 + 166211670 gtgtaggggtgttcaatgttttggctt-ccctggaccacactgaaagaagaagaattgtcttgggccacacacaagatacactaa i panTro5.chr7 C 0 C 0 s panPan2.chr7 155980873 84 + 162613886 gtgtaggggtgttcaatgttttggctt-ccctggaccacactgaaagaagaagaattgtcttgggccacacacaagatacactaa i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102855973 78 + 110113093 GTGTaggggtgttcaatcttttggctt-ccctggaccacattggaagaa------ttgtcttgggccacacacaagatacactaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178470703 84 + 185818997 gtgtaggggtatccaatcttttggctt-ccctggaccacactgaaagaagaagaattgtcttgggtcatacacaagatacactaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184960372 84 + 192294377 gtgtaggggtatccaatcttttggctt-ccctggaccacactgaaagaagaagaattgtcttgggtcatacacaagatacactaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929052 82 + 15219753 gtgtaggggtatccaatcttttggcttcccctggaccacactga---aagaagaattgtcttgggtcatacacaagatacactaa i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9573194 84 + 11639508 gtgtaggagtatccaatcttttggctt-ccctggaccacactgaaagaagaagaattgtcttgggtcacacacaagatacactaa i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120424576 84 + 127223203 gtgtaggggtatccaatcttttggctt-ccctggaccacactgaaagaagaagaattgtcttgggccacacacaagatacactaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1551071 84 - 2854183 gtgtaggggtatccaatcttttggctt-ccctggaccacactgaaagaagaagaattgtcttgggtcacacacaagatacactaa i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20257661 84 + 27496150 gtgtaggggtatccaatcttttggctt-ccctggaccacactgaaagaagaagaattgtcttgggccacacacaagatacactaa i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33710861 81 - 128169293 gtgtaggggtatccaatcttttggctt-tcttggaccactgtgaaagaagaa---ttgtcttgggccacacacaagatacgctaa i calJac3.chr8 I 6 C 0 s saiBol1.JH378140 17046396 80 + 19594188 gtgtaggggtatccaatcttttggctt-tcttggaccaccttgaaagaagaa---ctgttttgggccacacacaagatacact-a i saiBol1.JH378140 I 6 C 0 s cebCap1.NW_016107335v1 4933972 81 - 11686629 gtgtagaggtatccaatcttttggctt-tcttggaccaccttgaaagaagaa---ctgtcttgggccacacacaagatacactaa i cebCap1.NW_016107335v1 I 8 I 357 s aotNan1.NW_018506100v1 3284175 81 - 4527795 gtgtaggggtatccaatcttttggctt-tcttggaccaccttgaaagaagaa---ctgtcttggaccacacacaagatacgttaa i aotNan1.NW_018506100v1 I 8 I 353 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I a score=130142.000000 s hg38.chrUn_KI270746v1 63962 39 + 66486 cagtaatgacagctgatgagctaca------ca---------cacacacacaca s panTro5.chr7 156367951 39 + 166211670 cactaacgatagccgatgagctaca------ca---------cacacacacaca i panTro5.chr7 C 0 C 0 s panPan2.chr7 155980957 39 + 162613886 cactaacgatagccgatgagctaca------ca---------cacacacacaca i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856051 39 + 110113093 cactaacgatagctgatgagctaca------ca---------cacacacacaca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178470787 33 + 185818997 cactaatgacagctgatgagctatg------ca---------cacccc------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184960456 33 + 192294377 cactaatgacagctgatgagctatg------ca---------cacccc------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929134 33 + 15219753 cactaatgacagctgatgagctatg------ca---------catccc------ i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9573278 37 + 11639508 cactaatgagagctgatgagctatg--cacaca---------cacccc------ i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120424660 33 + 127223203 cactaatgacagctgatgagctatg------ca---------cacacc------ i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1551155 39 - 2854183 cactaatgacagctgatgagctatgcacacaca---------cacacc------ i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20257745 32 + 27496150 cactaatgacagctgatgagctatg------ca---------cacac------- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33710942 44 - 128169293 ----aatgatagctgatgaactact------ttaaaaaaaaacacacacacaca i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17046476 23 + 19594188 ----aatgatagctgatgagctact------ta--------------------- i saiBol1.JH378140 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e nasLar1.chr3 173337136 7184 + 179790006 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e aotNan1.NW_018506100v1 3284256 353 - 4527795 I e cebCap1.NW_016107335v1 4934053 357 - 11686629 I a score=7800.000000 s hg38.chrUn_KI270746v1 64001 1 + 66486 c s panTro5.chr7 156367990 1 + 166211670 c i panTro5.chr7 C 0 C 0 s panPan2.chr7 155980996 1 + 162613886 c i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856090 1 + 110113093 c i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178470820 1 + 185818997 c i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184960489 1 + 192294377 c i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929167 1 + 15219753 c i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9573315 1 + 11639508 c i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120424693 1 + 127223203 c i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1551194 1 - 2854183 c i manLeu1.NW_012102765v1 C 0 C 0 s nasLar1.chr3 173344320 1 + 179790006 c i nasLar1.chr3 I 7184 C 0 s colAng1.NW_012115154v1 20257777 1 + 27496150 c i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33710986 1 - 128169293 c i calJac3.chr8 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 825008 16809 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e aotNan1.NW_018506100v1 3284256 353 - 4527795 I e cebCap1.NW_016107335v1 4934053 357 - 11686629 I e saiBol1.JH378140 17046499 0 + 19594188 C a score=4402.000000 s hg38.chrUn_KI270746v1 64002 3 + 66486 aca s panTro5.chr7 156367991 3 + 166211670 aca i panTro5.chr7 C 0 C 0 s panPan2.chr7 155980997 3 + 162613886 aca i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856091 3 + 110113093 aca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178470821 2 + 185818997 -cc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184960490 2 + 192294377 -cc i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929168 2 + 15219753 -cc i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9573316 2 + 11639508 -cc i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120424694 2 + 127223203 -cc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1551195 2 - 2854183 -cc i manLeu1.NW_012102765v1 C 0 C 0 s nasLar1.chr3 173344321 2 + 179790006 -cc i nasLar1.chr3 C 0 C 0 s colAng1.NW_012115154v1 20257778 2 + 27496150 -ac i colAng1.NW_012115154v1 C 0 C 0 s rhiBie1.NW_016826791v1 841817 2 - 1396338 -cc i rhiBie1.NW_016826791v1 I 16809 C 0 s calJac3.chr8 33710987 3 - 128169293 tca i calJac3.chr8 C 0 I 2017 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e aotNan1.NW_018506100v1 3284256 353 - 4527795 I e cebCap1.NW_016107335v1 4934053 357 - 11686629 I e saiBol1.JH378140 17046499 0 + 19594188 C a score=6477.000000 s hg38.chrUn_KI270746v1 64005 2 + 66486 ca s panTro5.chr7 156367994 2 + 166211670 ca i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981000 2 + 162613886 ca i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856094 2 + 110113093 ca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178470823 2 + 185818997 cc i rheMac8.chr3 C 0 I 1 s macFas5.chr3 184960492 2 + 192294377 cc i macFas5.chr3 C 0 I 1 s macNem1.NW_012015910v1 7929170 2 + 15219753 cc i macNem1.NW_012015910v1 C 0 I 4 s cerAty1.NW_012008583v1 9573318 2 + 11639508 cc i cerAty1.NW_012008583v1 C 0 I 4 s chlSab2.chr21 120424696 2 + 127223203 ca i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012102765v1 1551197 2 - 2854183 ca i manLeu1.NW_012102765v1 C 0 I 1 s nasLar1.chr3 173344323 2 + 179790006 cc i nasLar1.chr3 C 0 N 0 s colAng1.NW_012115154v1 20257780 2 + 27496150 cc i colAng1.NW_012115154v1 C 0 I 1 s rhiBie1.NW_016826791v1 841819 2 - 1396338 cc i rhiBie1.NW_016826791v1 C 0 I 1 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e aotNan1.NW_018506100v1 3284256 353 - 4527795 I e cebCap1.NW_016107335v1 4934053 357 - 11686629 I e saiBol1.JH378140 17046499 0 + 19594188 C e calJac3.chr8 33710990 2017 - 128169293 I a score=-346.000000 s hg38.chrUn_KI270746v1 64007 21 + 66486 -----cacacacaaaaaaaaaaaaaa s panTro5.chr7 156367996 15 + 166211670 -----cacacacacacaaaa------ i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981002 20 + 162613886 -----cacacacacacacac-acaca i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856096 15 + 110113093 -----cacacacacacacaa------ i nomLeu3.chr13 C 0 C 0 s colAng1.NW_012115154v1 20257783 15 + 27496150 -----cccaaaaaaaaaaaa------ i colAng1.NW_012115154v1 I 1 I 7 s rhiBie1.NW_016826791v1 841822 13 - 1396338 -------ctcaaaaaaaaaa------ i rhiBie1.NW_016826791v1 I 1 I 1788 s saiBol1.JH378140 17046499 19 + 19594188 aaaaaatcataaaaacaaa------- i saiBol1.JH378140 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e aotNan1.NW_018506100v1 3284256 353 - 4527795 I e cebCap1.NW_016107335v1 4934053 357 - 11686629 I e manLeu1.NW_012102765v1 1551199 1 - 2854183 I e chlSab2.chr21 120424698 1 + 127223203 I e cerAty1.NW_012008583v1 9573320 4 + 11639508 I e macNem1.NW_012015910v1 7929172 4 + 15219753 I e rheMac8.chr3 178470825 1 + 185818997 I e calJac3.chr8 33710990 2017 - 128169293 I e macFas5.chr3 184960494 1 + 192294377 I a score=73329.000000 s hg38.chrUn_KI270746v1 64028 21 + 66486 aaaaaataa--cacctcataatg s panTro5.chr7 156368011 12 + 166211670 -----------cacctcataatg i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981022 21 + 162613886 cacacaaaa--cacctcataatg i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856111 12 + 110113093 -----------aaccacctcatg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178470826 20 + 185818997 -aaaaaaaa--cacctcataatg i rheMac8.chr3 I 1 C 0 s macFas5.chr3 184960495 20 + 192294377 -aaaaaaaa--cacctcataatg i macFas5.chr3 I 1 C 0 s macNem1.NW_012015910v1 7929176 21 + 15219753 aaaaaaaaa--cacctcataatg i macNem1.NW_012015910v1 I 4 C 0 s cerAty1.NW_012008583v1 9573324 21 + 11639508 aaaaaaaaa--cctctcataatg i cerAty1.NW_012008583v1 I 4 C 0 s chlSab2.chr21 120424699 22 + 127223203 -aaaaaaaaaccacctcataatg i chlSab2.chr21 I 1 C 0 s manLeu1.NW_012102765v1 1551200 20 - 2854183 -aaaaaaaa--cacctcataatg i manLeu1.NW_012102765v1 I 1 C 0 s colAng1.NW_012115154v1 20257805 21 + 27496150 aaaaaaaaa--cacctcataatg i colAng1.NW_012115154v1 I 7 C 0 s saiBol1.JH378140 17046518 21 + 19594188 acaaagaaa--cacctcataatg i saiBol1.JH378140 C 0 I 269 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e aotNan1.NW_018506100v1 3284256 353 - 4527795 I e cebCap1.NW_016107335v1 4934053 357 - 11686629 I e calJac3.chr8 33710990 2017 - 128169293 I a score=46167.000000 s hg38.chrUn_KI270746v1 64049 8 + 66486 ttttaaga s panTro5.chr7 156368023 8 + 166211670 ttttaaga i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981043 8 + 162613886 ttttaaga i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856123 8 + 110113093 ttttaaga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178470846 8 + 185818997 ttttaaga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184960515 8 + 192294377 ttttaaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929197 8 + 15219753 ttttaaga i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9573345 8 + 11639508 ttttaaga i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120424721 8 + 127223203 ttttaaca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1551220 8 - 2854183 ttttaaga i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20257826 8 + 27496150 ttttaaga i colAng1.NW_012115154v1 C 0 C 0 s saiBol1.JH378140 17046808 8 + 19594188 ttttaaga i saiBol1.JH378140 I 269 I 7 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e aotNan1.NW_018506100v1 3284256 353 - 4527795 I e cebCap1.NW_016107335v1 4934053 357 - 11686629 I e calJac3.chr8 33710990 2017 - 128169293 I a score=531681.000000 s hg38.chrUn_KI270746v1 64057 69 + 66486 aattttatgaatttctgttgggccacattcaaagccatcctggaccacatgtagcctgtgggccatggg s panTro5.chr7 156368031 69 + 166211670 aattttatgaatttctgttgggccacattcaaagccatcctggaccacatgtagcctgcgggccatggg i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981051 69 + 162613886 aattttaggaatttctgttgggccacattcaaagccatcctggaccacatgtagcctgcgggccatggg i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856131 69 + 110113093 aattttatgaatttctgttgggctacattcaaagccatcctggaccacatgtagcctgcgggccatggg i nomLeu3.chr13 C 0 M 100 s rheMac8.chr3 178470854 69 + 185818997 aaatttatgaatttctgttgggccacattcaaagccatcctggaccacatgtagcctgcgggccatggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184960523 69 + 192294377 aaatttatgaatttctgttgggccacattcaaagccatcctggaccacatgtagcctgcgggccatggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929205 69 + 15219753 aaatttatgaatttctgttgggccacattcaaagccatcctggaccacatgtagcctgcgggccatggg i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9573353 69 + 11639508 aaatttatgaatttctgttgggccacattcaaagccatcctggaccacatgtagcctgcgggccatggg i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120424729 69 + 127223203 aaatttatgaatttctgttgggccacattcaaagccatcctggaccacatgtagcctgcgggccatggg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1551228 69 - 2854183 aaatttatgaatttctgttgggccacattcaaagccatcctggaccacatgtagcctgcgggccatggc i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20257834 69 + 27496150 aaatttatgaatttctgttgggccacattcaaagccatcctggaccacatgtagcctgcgggccatggg i colAng1.NW_012115154v1 C 0 C 0 s saiBol1.JH378140 17046823 67 + 19594188 aattttacgaatttctgttgggccacattcaaagccatcctggatcacatgcagcctgcaggccatg-- i saiBol1.JH378140 I 7 C 0 s cebCap1.NW_016107335v1 4934410 67 - 11686629 aattttacgaatttctgttgggccacattcaaagccatcctggaccacatgcagcctgcaggccctg-- i cebCap1.NW_016107335v1 I 357 C 0 s aotNan1.NW_018506100v1 3284609 67 - 4527795 aattttacaaatttctgttgggtcacattcaaagtcatcctggaccgcatgcggcctgcaggctatg-- i aotNan1.NW_018506100v1 I 353 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e calJac3.chr8 33710990 2017 - 128169293 I a score=786796.000000 s hg38.chrUn_KI270746v1 64126 142 + 66486 ttggacaaacttctgtaagtgtatacacatgcatg-tatttcgtgacaccacctgctgaaagggtgaagaagtaaacaccctccagtagcaatgagcacacccagcacccattccccactaaaggaatctgggttacttattt s panTro5.chr7 156368100 142 + 166211670 ttggacaaacttctgtaagtgtatacacacgcatg-tatttcctgacaccacctgctgaaaggatgaagaagcaaacacccttcagtagcaatgagcacacccagcacccattccccactaaaggaatctgggttacttattt i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981120 142 + 162613886 ttggacaaacttctgtaagtgtatacacacgcatg-tatttcctgacaccacctgctgaaagggtgaagaagcaaacacccttcagtagcaatgagcacacccagcacccattccccactaaaggaatctgggttacttattt i panPan2.chr7 C 0 C 0 s rheMac8.chr3 178470923 126 + 185818997 ttggaaaagcttgtgtaagtgtatacacatgcatg-tatttcctgacaccaccaggtgaaagggtgaagaagcaaacaccctccagtagcaacgagcacacccaatacccactccccactaaaggaa---------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184960592 126 + 192294377 ttggaaaagcttgtgtaagcgtatacacatgcatg-tatttcctgacaccaccaggtgaaagggtgaagaagcaaacaccctccagtggcaacgagcacacccaatacccactccccactaaaggaa---------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929274 126 + 15219753 ttggaaaagcttgtgtaagtgtatacacatgcatg-tatttcctgacaccaccaggtgaaagggtgaagaagcaaacaccctccagtagcaacgagcacacccaatacccactccccactaaaggaa---------------- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9573422 142 + 11639508 ttggaaaagcttgtgtaagtgtatacacatgcatg-tatttcctgacatcaccaggtgaaagggtgaagaagcaaacaccctcccgtagcaacgagcacacccagtacccactccccactaaaggaatctgggttacttattt i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120424798 142 + 127223203 ttggaaaagcttgtgtaagtgtatacacatgcatg-tatttcctgacaccaccaggtgaaagggtgaagaagcaaacaccctccagtagcaacgagcacacccagcacccactccccactaaaggaatctgggttacttattt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1551297 142 - 2854183 ttggaaaagcttgtgtaagtgtatacacatgcatg-tatttcctgacaccaccaggtgaaagcgtgaagaagcaaacaccctcccgtagcaacgagcacacccagtacccactccccactaaaggaatctgggttacttattt i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20257903 142 + 27496150 gtggaaaagcttttgtaagtgtacacacatgcatg-tatttcctgacgccaccaggtgaaagggtgaagaagcaaacaccctccagtagcaacgagcacacccagcacccattccccactaaaggaatctgggttacttattt i colAng1.NW_012115154v1 C 0 C 0 s saiBol1.JH378140 17046890 136 + 19594188 ttggacaagcttgtg-aagcctatacacatgcgtgttatttcctgaccccacctgctgaaagggtgcagaagcaaacaccttccagtaggaatgag--cacctagcacccattccccactaaaggcatctgggttac----tt i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4934477 136 - 11686629 ttggacaagcttgtg-aagtgtatacacatgcgtgttatttcctgaccccatctgctgaaagggtgcagaagcaaacaccctccagtagcaatgag--cacctagcacccattccccactaaaggaatctgggttac----tt i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3284676 136 - 4527795 ttggacaagcttgtg-aagtgtatacacatgcatgttatttcctgaccccacctgctgaaagggtgcagaaacaaacaccctccagtagcaatgag--cacctagcacccattccccactaaaggaatctgggttac----tt i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5494683 6985 - 12253515 I e calJac3.chr8 33710990 2017 - 128169293 I e nomLeu3.chr13 102856200 100 + 110113093 M a score=1431003.000000 s hg38.chrUn_KI270746v1 64268 231 + 66486 aacaatggacttattccaggactggggcatgggaggtataagatgagcttgtaacatc-ttgttacaccaaaaagt-atgaagtgttcaaaaaagcggtgagggcagaacaccagt------gccagcttgaaggagcaactgacagc-aagtatgtgactatttgagc-caaaaaataattaggtaatgagttgtaaa----tgattgaagataataggagttcatgagtcaatattaatagta s panTro5.chr7 156368242 228 + 166211670 aacaatggacttattccaggactggggcacgggaggtataagatgagcttgtaacatc-ttgttacaccaaaaagt-atgaagtgttcaaataagtggtgagggcacaacaccagc------gccagcttgaaggagcaactgacagc-aagtatgggactatttgagc-caaaaaataattaggtaatgagttgtaaa----tgattgaagataacaggagctcatgagtcagtattaata--- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981262 228 + 162613886 aacaatggacttattccaggactggggcacgggaggtataagatgagcttgtaacatc-ttgttacaccaaaaagt-atgaagtgttcaaataagtggtgagggcacaacaccagc------gccagcttgaaggagcaactgacagc-aagtatgggactatttgagc-caaaaaataattaggtaatgagttgtaaa----tgattgaagataacaggagctcatgagtcagtattaata--- i panPan2.chr7 C 0 C 0 s rheMac8.chr3 178471049 220 + 185818997 --------------tccaggactggggcatgggaggtataagatgagcttgtaacatc-ttgttataccaaaaagtaatgaagtgttcacataagtggtgagggcagaacactggc------accagcttgaaggagcaactgacagc-aaacatgggaccatgtgaacacaaaaaataattaggtaatgagttgtaaatgactgactgaagataataggagctcatgagtcaatatcaata--- i rheMac8.chr3 C 0 I 3 s macFas5.chr3 184960718 220 + 192294377 --------------tccaggactggggcatgggaggtataagatgagcttgtaacatc-ttgttataccaaaaagtaatgaagtgttcacataagtggtgagggcagaacactggc------accagcttgaaggagcaactgacagc-aaacatgggaccatgtgaacacaaaaaataattaggtaatgagttgtaaatgactgactgaagataataggagctcatgagtcaatatcaata--- i macFas5.chr3 C 0 I 3 s macNem1.NW_012015910v1 7929400 220 + 15219753 --------------tccaggactggggcatgggaggtatgagatgagcttgtaacatc-ttgttataccaaaaagtaatgaagtgttcacataagtggtgagggcagaacactggc------accagcttgaaggagcaactgacagc-aaacatgggaccatgtgaacacaaaaaataattaggtaatgagttgtaaatgactgactgaagataataggagctcatgagtcaatatcaata--- i macNem1.NW_012015910v1 C 0 I 3 s cerAty1.NW_012008583v1 9573564 234 + 11639508 aacaatggacttattccaggactggggcatgggaggtataagatgagcttgtaacatc-ttgttataccaaaaagtaatgaagtgttcacataagtggtgagggcagaacaccagc------accagcttgaaggagcaactcacagc-aaacatgggaccatttgaacacaaaaaataattaggtaatgagttgtaaatgactgactgaaggtaataggagctcatgagtcaatatcaata--- i cerAty1.NW_012008583v1 C 0 I 3 s chlSab2.chr21 120424940 234 + 127223203 aacaatggacttattccaggactggggcatgggaggtaaaagatgagcttgtaacatc-ttgttataccaaaaagtaatgaagtgttcacataagtggtgagggcagaacaccggc------acccgcttgaaggagcaactgacagc-aaacatgggaccatttgaacacaaaaaataattaggtaatgagttgtaaatgactgactgaagataataggagctcatgagtcaatattaata--- i chlSab2.chr21 C 0 I 3 s manLeu1.NW_012102765v1 1551439 234 - 2854183 aacaatggacttattccaggactggggcatgggaggtataagatgagcttgtaacatc-ttgttataccaaaaagtaatgaagtgttcacataagtggtgagggcagaacaccggc------accagcttgaaggagcaactgacagc-aaacatgggaccatttgaacacaaaaaataattaggtaatgagttgtaaatgactgactgaaggtaataggagctcatgagtcaatatcaata--- i manLeu1.NW_012102765v1 C 0 I 3 s colAng1.NW_012115154v1 20258045 234 + 27496150 aacaataaacttactccaggactggggcatgggaggtataagatgagcttgtaacatc-ttgttataccaaaaaataatgaagtgttcacataagtggtgagggcagaacaccggc------gccagcttgaaggagcaactgacagc-aaacatgggactatttgaacacaaaaaataattaggtaatgagttgtaaatgactgactgaagataataggagctcatgagtcaatatcaata--- i colAng1.NW_012115154v1 C 0 I 3 s saiBol1.JH378140 17047026 230 + 19594188 agcaatggactgattccagggctggggcacaggaggtataagacgggcttgtaatatctttgttataccaaaaagtaatgaagtgttcacacaagaggtgagggcaggaaacctat------gccagcttgaagaagcaaccaacagt-aagtatgggactatttgagcac-aaaaattattaggtaatgaggtgtaaa----tgattgaagataataggagttctcaaggtgatatcaata--- i saiBol1.JH378140 C 0 I 3 s cebCap1.NW_016107335v1 4934613 230 - 11686629 aacaatggactgattccagggctggggcacaggaagtataacatgggcttataacatctttgttataccaaaaagtaatgaagtgttcacataagaggtgagggcaggaaatcggt------gccagcttgaagaagcaaccaacagc-aagtatggggctatttgagcac-aaaaattattaggtaatgagttgtaaa----tgattgaagataacaggagttctcaaggtgatatcaata--- i cebCap1.NW_016107335v1 C 0 I 3 s aotNan1.NW_018506100v1 3284812 229 - 4527795 aacaatggactgattccagggctggggcacagaaggtataagatgggcttgtaacatctttgttataccaaaaagtaatgaagtgttcacataagaggtgagggcaggaaaccggt------gccagcttgaagaagcaaccaac-gc-aagtatgggactatttgagcac-aaaaattattaggtaatgagttgtaaa----tgattgaagataataggagttctcaaggtgatatcagta--- i aotNan1.NW_018506100v1 C 0 I 3 s otoGar3.GL873572 5501668 223 - 12253515 aaaagtggactaatcccagggttggggcaaggaagctg-aagatgagttaagaacatc--tgttacactaaaaagtaattaagggttaaaataaatgacaagggaatgacacagacatataagccatgttgaaggagcaagcaaaaactaaataacggacaatttgagctc-aaaaataattagacaat----tataaa-------ctgaa---aataggaattcacacgtcaatatca-ta--- i otoGar3.GL873572 I 6985 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e calJac3.chr8 33710990 2017 - 128169293 I e nomLeu3.chr13 102856200 100 + 110113093 M a score=1077760.000000 s hg38.chrUn_KI270746v1 64499 134 + 66486 agtaagcttaacatg--tgaaagaagtgtt-cttgcttacaaaagaaagcagagggctaactggtaaatgtggtgggagtgct-agagctggaaatacatca-tttgcaaccaaaagaaagcatgttaaaatggcatca s panTro5.chr7 156368470 133 + 166211670 agtaagttta-catg--tgaaagaagtgtt-cttgcttacaaaagaaagcagagggctaactggtaaatgcggtgggagtgct-agagctggaaatgcatca-tttgcaaccaaaacaaagcaggttaaaatggcatca i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981490 133 + 162613886 agtaagttta-catg--tgaaagaagtgtt-cttgcttacaaaagaaagcagagggctaactggtaaatgcggtgggagtgct-agagctggaaatgcatca-tttgcaaccaaaacaaagcaggttaaaatggcatca i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856301 134 + 110113093 AATAAGTTTAACATG--TGAAAGAAGTGTT-CTTGCTTACAAAAGAAAGCAGAGGGCTAACTGGTAAATGTGGTGGGAGTGCT-AGAGCTGGAAATGCATCA-TTTGCAACCAAAAGAAAGCAGGTTAAAATGGCATCA i nomLeu3.chr13 M 100 C 0 s rheMac8.chr3 178471272 127 + 185818997 agtaagt----------tgaaagaagtatt-cttgcttacaaaagaaagcagagggctaactggtaaatgtggtgggagtgctaagagctggaaatgcatca-tttgcaaccaaaagaaagcaggttaaaatggcatca i rheMac8.chr3 I 3 C 0 s macFas5.chr3 184960941 127 + 192294377 agtaagt----------tgaaagaagtatt-cttgcttacaaaagaaagcagagggctaactggtaaatgtggtgggagtgctaagagctggaaatgcatca-tttgcaaccaaaagaaagcaggttaaaatggcatca i macFas5.chr3 I 3 C 0 s macNem1.NW_012015910v1 7929623 135 + 15219753 agtaagtttaacatg--tgaaagaagtatt-cttgcttacaaaagaaagcagagggctaactggtaaatgtggtgggagtgctaagagctggaaatgcatca-tttgcaaccaaaagaaagcaggttaaaatggcatca i macNem1.NW_012015910v1 I 3 C 0 s cerAty1.NW_012008583v1 9573801 134 + 11639508 agtaagtttaacatg--tgaaagaagtatt-cttgcttacaaaagaaagcagagggctaactggtaaatgtggtgggagtgct-agagctggaaatgcatca-tttgcaaccaaaagaaagcaggttaaaatggcatca i cerAty1.NW_012008583v1 I 3 C 0 s chlSab2.chr21 120425177 134 + 127223203 agtaagtttaacatg--tgaaagaagtatt-cttgcttacaaaagaaagcagagggctaactggtaaatgtgctgggagtgct-agagctggaaatgcatca-tttgcaaccaAAAGAAAGCAGGTTAAAACGGCATCA i chlSab2.chr21 I 3 C 0 s manLeu1.NW_012102765v1 1551676 134 - 2854183 agtaagtttaacatg--tgaaagaagtatt-cttgcttacaaaagaaagcagagggctaactggtaaatgtggtgggagtgct-agacctggaaatgcatca-tttgcaaccaaaagaaagcaggttaaaatggcatca i manLeu1.NW_012102765v1 I 3 C 0 s colAng1.NW_012115154v1 20258282 134 + 27496150 agtaagtttaacatg--tgaaagaagtatt-cttgcttacaaaagaaagcagagggctaactggtaaatgtggtgggagtgct-agagctggaaatgcacta-tttgcaaccaaaagaaagcaggttaaaatggcatca i colAng1.NW_012115154v1 I 3 C 0 s saiBol1.JH378140 17047259 130 + 19594188 agtaagtttaacatg--tggaagaagtgtt-----cttataaaagaaagcagagggctaactggtaaatgtggtagaagtgct-agagctggaaatgcatca-tttgcaaccaaaagcaagcaggttaaaatggcatca i saiBol1.JH378140 I 3 C 0 s cebCap1.NW_016107335v1 4934846 135 - 11686629 agtaagtttaacatg--tgcaagaagtgttctttgcttacaaatgaaagcagagggctaactggtaaatatggtggaagtgct-agagttggaaatgcatca-tctgcaaccaaaagcaagcaggttaaaatggcatcg i cebCap1.NW_016107335v1 I 3 C 0 s aotNan1.NW_018506100v1 3285044 134 - 4527795 agtacgtttaacatg--tggaagaagtctt-cttgcttacaaaagaaagcagagggctaactggtaaatatggtgggagtgct-agagttggaaatgcatca-tttgcaaccaaaagcaagcaggttaaaatggcatta i aotNan1.NW_018506100v1 I 3 C 0 s otoGar3.GL873572 5501891 125 - 12253515 ---aagttttacatggaagaaaagaggctg-tatgcttataacagaaagcagagggctgactgctaagtgtggatgaagtgct---tgttggaaattcatcattttgcaaccaa-------caagtcaaaatggcatca i otoGar3.GL873572 C 0 I 317 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e calJac3.chr8 33710990 2017 - 128169293 I a score=147518.000000 s hg38.chrUn_KI270746v1 64633 21 + 66486 tcaggcagtaagtttgttgtt s panTro5.chr7 156368603 21 + 166211670 tcaggcagtaagtttgttgtt i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981623 21 + 162613886 tcaggcagtaagtttgttgtt i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856435 21 + 110113093 TCAGGCAGTAAGgttgttgtt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178471399 21 + 185818997 tcaggcagtaagttttttgtt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184961068 21 + 192294377 tcaggcagtaagttttttgtt i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929758 21 + 15219753 tcaggcagtaagttttttgtt i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9573935 21 + 11639508 tcaggcagtaagttttttgtt i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120425311 20 + 127223203 TCAGGCAGTAAG-TTTTTGTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1551810 21 - 2854183 tcaggcagtaagttttttgtt i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20258416 21 + 27496150 tcaggcagtaagttttttgtt i colAng1.NW_012115154v1 C 0 C 0 s saiBol1.JH378140 17047389 21 + 19594188 tcaggcagtaaggtttttttt i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4934981 21 - 11686629 tcaggcagtaaggtttttttt i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3285178 21 - 4527795 tcaggaagtaaggtttttttt i aotNan1.NW_018506100v1 C 0 I 8 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5502016 317 - 12253515 I e calJac3.chr8 33710990 2017 - 128169293 I a score=-17914.000000 s hg38.chrUn_KI270746v1 64654 10 + 66486 gttgttgctg---- s panTro5.chr7 156368624 10 + 166211670 gttgttgttg---- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981644 4 + 162613886 gt------tg---- i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856456 4 + 110113093 gt------tc---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178471420 2 + 185818997 gc------------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184961089 2 + 192294377 gc------------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929779 2 + 15219753 gc------------ i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9573956 2 + 11639508 gc------------ i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120425331 2 + 127223203 GC------------ i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1551831 2 - 2854183 gc------------ i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20258437 2 + 27496150 gt------------ i colAng1.NW_012115154v1 C 0 C 0 s cebCap1.NW_016107335v1 4935002 10 - 11686629 ----ttcttggttt i cebCap1.NW_016107335v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5502016 317 - 12253515 I e aotNan1.NW_018506100v1 3285199 8 - 4527795 I e saiBol1.JH378140 17047410 0 + 19594188 C e calJac3.chr8 33710990 2017 - 128169293 I a score=606.000000 s hg38.chrUn_KI270746v1 64664 6 + 66486 -----ttgttg s panTro5.chr7 156368634 6 + 166211670 -----ttgttg i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981648 6 + 162613886 -----ttgttg i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856460 6 + 110113093 -----ttgttg i nomLeu3.chr13 C 0 C 0 s saiBol1.JH378140 17047410 7 + 19594188 ---tcttgtt- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4935012 8 - 11686629 --gttttgtt- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3285207 10 - 4527795 ttgttttgtt- i aotNan1.NW_018506100v1 I 8 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5502016 317 - 12253515 I e colAng1.NW_012115154v1 20258439 0 + 27496150 C e manLeu1.NW_012102765v1 1551833 0 - 2854183 C e chlSab2.chr21 120425333 0 + 127223203 C e cerAty1.NW_012008583v1 9573958 0 + 11639508 C e macNem1.NW_012015910v1 7929781 0 + 15219753 C e rheMac8.chr3 178471422 0 + 185818997 C e calJac3.chr8 33710990 2017 - 128169293 I e macFas5.chr3 184961091 0 + 192294377 C a score=1398192.000000 s hg38.chrUn_KI270746v1 64670 209 + 66486 ttgttgttgctgtttttt-----gagatagagtctatctctgtcacccaggctggagtgtagtagcatgagtccaactcact---gc-aacctc-acctcctgggttcaagcgattctccggtctcagcatcctgagtagctgggattacatggcacccgctaccatgcc-tggctaatttttgtatt--tttagtacagacaggg---tttcaccctgttggcc s panTro5.chr7 156368640 209 + 166211670 ttgctgttgttgttttt------gagacagagtctatctctgtcacccaggctggagtgtagtagcatgagttcggctcact---gc-aacctctgcctcccgggttcaagcaattctcctgtctcggcatcctgagtagctgggattacatggcacccgctaccatgcc-tggctaatttttgtatt--tttattacagacaggg---tttcaccatgttggcc i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981654 209 + 162613886 ttgctgttgttgttttt------gagacagagtctatctctgtcacccaggctggagtgtagtagcatgagttcggctcact---gc-aacctctgcctcccgggttcaagcaattctcctgtctcggcatcctgagtagctgggattacatggcacccgctaccatgcc-tggctaatttttgtatt--tttattacagacaagg---tttcaccatgttggcc i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856466 213 + 110113093 ttgttgttgttgttgttt-----gagatggagtctatctctgtcacccaggctggagtgtagtggcatgatttcggctcact---gc-aacctctgcctcctgggtgcaagcaattctcctgtctcagcatcctgagtagctgggattacatggcacctgctaccatgcc-cggctaacttttgtatt--tttagtacagacagggttttttcaccatgttggcg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178471422 200 + 185818997 ----------tgttgttc-----gagatggagtctatctctgtcacccaggctggaatgcagtggcatgagctcagctcact---gcaaacctctgcctcccgggttcaagcgattctcctgtctcggcatcctgagtagttggaattaca-ggcagccgctaccatgcc-tggctaatttttgtact--tttactacagacaggg---tttcaccatgttggcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184961091 200 + 192294377 ----------tgttgttc-----gagatggagtctatctctgtcacccaggctggaatgcaatggcatgagctcagctcact---gcaaacctctgcctcccgggttcaagcgattctcctgtctcagcatcctgagtagttggaattaca-ggcagccgctaccatgcc-tggctaatttttgtact--tttactacagacaggg---tttcaccatgttggcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929781 200 + 15219753 ----------tgttgttc-----gagatggagtctatctctgtcacccagcctggaatgcagtggcatgagctcagctcact---gcaaacctctgcctcccgggttcaagcgattctcctgtctcggcatcctgagtagttggaattaca-ggcagccgctaccatgcc-tggctaatttttgtact--tttactacagacaggg---tttcaccatgttggcc i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9573958 200 + 11639508 ----------tgttgttt-----gagatggagtctatctctgtcacccagactggaatgcagtggcatgagctcagcttact---gcaaacctctgcctcccgggttcaagcgattctcctgtctcggcatcctgagtagttggaattaca-ggcagccactaccatgcc-tggctaatttttgtact--tttactacagacaggg---tttcaccatgttggcc i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120425333 200 + 127223203 ----------TGTTGttt-----gagatggagtctatctctgtcacccaggctggaatgcagtggcatgagctcggctcact---gcaaacctctgcctcccgggttcaagcgattctcctgtctcagtaccctgagtagcaggaattaca-ggcagctgctaccacgcc-tggctaatttttgtact--tttactacagacaggg---tttcaccatgttggcc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1551833 200 - 2854183 ----------tgttgttt-----gagatggagtctatctctgtcaccca-gctggaatgcagtggcatgagctcagcttact---gcaaacctctgcctcccgggttcaagcgattctcctgtctcggcatcctgagtagttggaattaca-ggcagccgctaccatgccttggctaatttttgtact--tttactacagacaggg---tttcgccatgttggcc i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20258439 200 + 27496150 ----------tgttgttt-----gagacagagtctatctctgtcacccaggctggaatgcagtggtatgagctcggctcact---gcaaacctctgcctcccgggttcaagcgattctcctgtccaggcatcctgagtagttggaattaca-ggcagccgctaccatgcc-tggctaatttttgtact--tttactaccgacaggg---tttcaccatgttggcc i colAng1.NW_012115154v1 C 0 C 0 s saiBol1.JH378140 17047417 199 + 19594188 ----------tttgtttt-----gagagggagtctacctctgtcacccaggctggacagcagtggtacgagcttggctcact---ac-aacctctgcctcccaggctcaagcaattctcctgtctcagcctccctagcaggtgtgacaaca-gtcacaggccaccacacc-tggctaatttttgtatt--tttagtagagacgggg---tttcaccatgctggcc i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4935020 202 - 11686629 ----------tttgtttt-----gagaggaagtctagctctgtaacccaggctggggggcagtggtgcgagcttggctcactgcaac-aacctctgcctcctgggctcaagtgattgtcctgtctcagcctccctagtagctgtgacaaca-gtcacaggccaccacgcc-tggctaatttttgtatt--tttagtagagacaggg---tttcaccatgttggcc i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3285217 199 - 4527795 ----------tttgtttt-----gagagggagtctagctctatcacccaggctggagggcagtggtgcgagcttggctcacc---gc-aacctctgcctcccgggctcaagcaattgtcctatctcagcctccctagtagctgtgacaaca-gtcacaggccaccacgcc-tggctaatttttgtatt--tttagtagagatgggg---tttcaccatgttggcc i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5502333 213 - 12253515 ttctttttttttttttttttaaagagacagagtctcactttattgccctcggtagagtgccatagcgtca---cagctcaca---gc-aacctccaactcctgggctttggcgattctcttggctcagcctcccaattagctgggactaca-ggcgtctgccacaacgtc-cagctattttttgtcacagtttgcctggggccagg---ttcaaacctgccaccc i otoGar3.GL873572 I 317 I 315 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e calJac3.chr8 33710990 2017 - 128169293 I a score=539500.000000 s hg38.chrUn_KI270746v1 64879 74 + 66486 aggctgatctcgaactcctgacctcaagtgatccacccacttcagcctcccaaagtgctgggattacaggtgtg s panTro5.chr7 156368849 74 + 166211670 aggctgatctcgaactcctgacctcaactgatccacccgcttcagcctcccaaagtgctaagattataggcatg i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981863 74 + 162613886 aggctgatctcgaactcctgacctcaactgatccacccgcttcagcctcccaaagtgctaagattataggcatg i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856679 74 + 110113093 aggctgatctcgaactcctgacctcaagtgatccacctgcttcagcctcccaaagtggtgagattacaggtgtg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178471622 74 + 185818997 accctgatctcaaactcctcacctcaagtgatccgcccgcttcagcctcccaaagtgctgggattacaggcgtg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184961291 74 + 192294377 acgctgatctcaaactcctcacctcaagtgatccgcccgcttcagcctcccaaagtgctgggattacaggcgtg i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7929981 74 + 15219753 acgctaatctcaaactcctcacctcaagtgatccgcccgcttcagcctcccaaagtgctgggattacaggcgtg i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9574158 74 + 11639508 acgctgatctcaaactcctcacctcaagtgatccgcccgcttcagcctcccaaagtgctgggattacaggcgtg i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120425533 74 + 127223203 atgctgatctcaaactcctgacctcaagtgatccgcccgcttcagcctcccaaagtgctgggattacaggcgtg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1552033 74 - 2854183 acgctgatctcaaactcctcacctcaagtgatctgcccgcttcagcctcccaaagtgctgggattacaggcgtg i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20258639 74 + 27496150 acgctgatctcaaactcctgacctcaagtgatccgcccgcttcagcctcccaaagtgctaggattacaggcatg i colAng1.NW_012115154v1 C 0 C 0 s saiBol1.JH378140 17047616 74 + 19594188 aggctggtctcgaactcctgacttcaaatcatccacccacttcggcctcccaaagtactgggatcacaggtatg i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4935222 74 - 11686629 aggctggtctcgaactcctgacttcaaatcatccacccacttcggcctcccaaagtactgggatcacaggcatg i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3285416 74 - 4527795 aggctggtctcgaactcctgacttcaaatgatccacccacttcggcctcccaaagtactgggatcacaggcgtg i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e canFam3.chr16 16064727 5045 + 59632846 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5502546 315 - 12253515 I e calJac3.chr8 33710990 2017 - 128169293 I a score=988836.000000 s hg38.chrUn_KI270746v1 64953 128 + 66486 agccaccacacccggcc-tagggagtaa--gtttttcaaatctagaaggaaattctgaggaaaagcaagatatttgcatggtcttaaagta--tcctcacatactg-ctttattagatacaaa---ggaggg-gggaa s panTro5.chr7 156368923 128 + 166211670 agccaccacacccagcc-tagggagtaa--gattttcaaatctagaaggaaattctgaggaaaagcaagatatttgcatggtcttaaagtg--tcctcacatactg-ctttattagatacaaa---ggaggg-ggaaa i panTro5.chr7 C 0 C 0 s panPan2.chr7 155981937 128 + 162613886 agccaccacacccagcc-tagggagtaa--gtttttcaaatctagaaggaaattctgaggaaaagcaagatatttgcatggtcttaaagtg--tcctcacatactg-ctttattagatacaaa---ggaggg-ggaaa i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856753 129 + 110113093 agccatcacacccagccTTAGGGAGTAA--GTTTTtaaaatctagaaggaaattctgaggaaaagcaagatatttgcatggtcttaaagtg--tcctcacatactg-ctttattagatataaa---ggAGGG-GGAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178471696 130 + 185818997 agccaccacccctggcc-tagggagtaa--gtttttaaaatctagaaggaagttctgaggaaaagcaagatatctgcatggtcttaaagtgtctcctcacatactg-ctttattagatacaaa---ggaggg-ggaaa i rheMac8.chr3 C 0 I 3 s macFas5.chr3 184961365 130 + 192294377 agccaccacccctggcc-tagggagtaa--gtttttaaaatctagaaggaagttctgaggaaaagcaagatatctgcatggtcttaaagtgtctcctcacatactg-ctttattagatacaaa---ggaggg-ggaaa i macFas5.chr3 C 0 I 3 s macNem1.NW_012015910v1 7930055 130 + 15219753 agccaccacccctggcc-tagggagtaa--gtttttaaaatctagaaggaagttctgaggaaaagcaagatatctgcatggtcttaaagtgtctcctcacatactg-ctttattagatacaaa---ggaggg-ggaaa i macNem1.NW_012015910v1 C 0 I 3 s cerAty1.NW_012008583v1 9574232 130 + 11639508 aaccaccacccctggcc-tagggagtaa--gtttttaaaatctagaaggaagttctgaggaaaagcaagatatctgcatggtcttaaagtgtctcctcacatactg-ctttattagatacaaa---ggaggg-ggaaa i cerAty1.NW_012008583v1 C 0 I 3 s chlSab2.chr21 120425607 130 + 127223203 agccaccacccctggcc-TAGGGAGTAA--GTTTTtaaaatctagaaggaagttctgaggaaaagcaagatatctacatggtcttaaagtgtctcctcacatactg-ctttatgagatacaaa---ggaggg-ggaaa i chlSab2.chr21 C 0 I 3 s manLeu1.NW_012102765v1 1552107 130 - 2854183 aaccaccacccctggcc-tagggagtaa--gtttttaaaacctagaaggaagttctgaggaaaagcaagatatctgcatggtcttaaagtgtctcctcacatactg-ctttattagatacaaa---ggaggg-ggaaa i manLeu1.NW_012102765v1 C 0 I 3 s colAng1.NW_012115154v1 20258713 130 + 27496150 agccaccacccctggcc-tagggagtaa--gtttttaaaatctagaaggaagttctgaggaaaagcaagatatctgcatggtcttaaagtgtctcctcacatactg-ctttattagattcaaa---ggaggg-ggaaa i colAng1.NW_012115154v1 C 0 I 3 s saiBol1.JH378140 17047690 134 + 19594188 ggccaccatgattggcc-tagggagtaa--gactttaaaatctagaaggaaattctgagcagaagcaagatatttgcatggtcttaaagtatctcctcacatactg-ctttattagacacaaaggTGGGGGGTGGGGA i saiBol1.JH378140 C 0 I 12 s cebCap1.NW_016107335v1 4935296 131 - 11686629 agccaccatgactggcc-tagggagtaa--gactttaaaatctagaaggaaattctaagcagaagtaagatatctgcatggtcttaaagtatctcctcacatactg-ttttattagacacaaa---gggggcagggga i cebCap1.NW_016107335v1 C 0 I 3 s aotNan1.NW_018506100v1 3285490 133 - 4527795 agccaccatgactggcc-tagggagtaa--gactttaaaatctagaaggaaattctgagcagaagcaagatatttgcatggtcttaaagtatctcctcacatactg-ctttattagacacaaatg-gcggggtgggga i aotNan1.NW_018506100v1 C 0 I 1 s canFam3.chr16 16069772 129 + 59632846 aaccaacacatacaaat-gatgaagcaatggtttctaaaatcttggaggaaaatttgagg---agcaagatagtcacatgatcttaaa-tatcttctcatataatgtttttattagatgtgaa---aaaagg-aagaa i canFam3.chr16 I 5045 I 11 e dasNov3.JH575209 1234783 7918 + 1922530 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5502546 315 - 12253515 I e calJac3.chr8 33710990 2017 - 128169293 I a score=1596956.000000 s hg38.chrUn_KI270746v1 65081 214 + 66486 tagaaattgggcaacagcctga--ccaggtgatt-------------ctcatgagggaaagtggaataatatgtgcttccagttgtgataccctgaggat-ggatcagcattttgcagtattctggtcaataatgcatgcctctcatctaattataaggggttatcaaaaacaaaatg--gggaaatttctGTTTG---AAAAAAG--AAAAAAACAAG-TATATCGAGAAGAAC-TCT s panTro5.chr7 156369051 213 + 166211670 -agaaattgggcaacagcctga--ccaggtgatt-------------cccatgagggaaagtggaataatgtgtgcttccagctgtgataccctgaggat-ggatcagtactttgcagtattctggccaataatgcatgcctctcatctaattataaggggatatcaaagacaaaATG--GGGAAATTT--GTTTG---AAAAAAAGAAAAAAAACAAG-TATATCGAGAAGAAC-TCT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155982065 212 + 162613886 -agaaattgggcaacagcctga--ccaggtgatt-------------cccatgagggaaagtggaataatgtgtgcttccagctgtgataccctgaggat-ggagcagtactttgcagtattctggccaataatgcatgcctctcatctaattataaggggatatcaaagacaaaATG--GGGAAATTT--GTTTG---AAAAAAAG-AAAAAAACAAG-TATATCGAGAAGAAC-TCT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102856882 214 + 110113093 AAGAAATTGGGCAACAGCCTGA--CCAGGTGATT-------------CCCATGAGGGAAAGTGGAATAATGtgtgcttccagctgtgataccctgaggat-ggatcagcactttgcagtattctggccaataatgcatgcctctcatctaattataaggggatatcaaagacaaaATG--GGGAAATTTCTGTTTG---AAAAAAG--AAAAAAACAAG-TATAACGAGAAGAAC-TCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178471829 214 + 185818997 aagaaattgggcaacagcctga--ccaggtgatt-------------cccatgagggaaagtggaataatgtatgcttccagctgtgataccttgaggat-ggatcagcactttgcagtattctggccaataatgcatgcctctcatctaatcataagggaatatcaaagacaaaATG--GGGAAATTTCTGTTTG---AAAAAAG--AAAAAAACAAG-TATATTGGGAAGAAC-TCT i rheMac8.chr3 I 3 C 0 s macFas5.chr3 184961498 214 + 192294377 aagaaattgggcaacagcctga--ccaggtgatt-------------cccatgagggaaagtggaataatgtatgcttccagctgtgataccttgaggat-ggatcagcactttgcagtattctggccaataatgcatgcctctcatctaatcataagggaatatcaaagacaaaATG--GGGAAATTTCTGTTTG---AAAAAAG--AAAAAAACAAG-TATATTGGGAAGAAC-TCT i macFas5.chr3 I 3 C 0 s macNem1.NW_012015910v1 7930188 214 + 15219753 aagaaattgggcaacagcctga--ccaggtgatt-------------cccatgagggaaagtggaataatgtatgcttccagctgtgataccttgaggat-ggatcagcactttgcagtattctggccaataatgcatgcctctcatctaatcataagggaatatcaaagacaaaATG--GGGAAATTTCTGTTTG---AAAAAAG--AAAAAAACAAG-TATATTGGGAAGAAC-TCT i macNem1.NW_012015910v1 I 3 C 0 s cerAty1.NW_012008583v1 9574365 214 + 11639508 aagaaatttggcaacagcctga--ccaggtgatt-------------cccatgagggaaagtggaataatgtatgcttccagctgtgataccttgaggat-ggatcagcactttgcagtattctggccaataatgcatgcctctcatctaatcataaggggatatcaaagacaaaATG--GGGAAATTTCTGTTTG---AAAAAAG--AAAAAAGCAAG-TATATTGGGAAGAAC-TCT i cerAty1.NW_012008583v1 I 3 C 0 s chlSab2.chr21 120425740 214 + 127223203 aagaaatttggcaacagcctga--ccaggtgatt-------------cccatgagggaaagtggaataatgtgtgcttccagctgtgataccttgaggat-ggatcagcactttgcagtattctggccaataatgcatgcctctcatctaatcataaggggatatcaaagacaaaATG--GGGAAATTTCTGTTTG---AAAAAAG--AAAAAAACAAG-TATATTGGGAAGAAC-TCT i chlSab2.chr21 I 3 C 0 s manLeu1.NW_012102765v1 1552240 214 - 2854183 aagaaatttggcaacagcctga--ccaggtgatt-------------cccatgagggaaagtggaataatgtatgcttccagctgtgataccttgaggat-ggatcagcactttgcagtattctggccaataaggcatgcctctcatctaatcataaggggatatcaaagacaaaATG--GGGAAATTTCTGTTTG---AAAAAAG--AAAAAAACAAG-TATATTGGGAAGAAC-TCT i manLeu1.NW_012102765v1 I 3 C 0 s colAng1.NW_012115154v1 20258846 214 + 27496150 aagaaatttggcaacagcctga--ccaggtgatt-------------cccatgagggaaagtggaataatgtgtgcttccagctgtgataccttgaggat-ggatcagcactttgcagtattctggccaataatgcatgcctctcatctaatcataaggggatatcaaagacaaaATG--GGGAAATTTCTGTTTG---AAAAAAG--AAAAAAACAAG-TATATTGGGAAGAAC-TCT i colAng1.NW_012115154v1 I 3 C 0 s saiBol1.JH378140 17047836 202 + 19594188 GCGGGATTTGGCAAGAGCCTGA--CCAGGTGATT-------------TCCTCAAGGGAAACAGGAA-------TGTTTCCAGCTGTGATATCTTGAAGAT-GCATCAGCACTTTGCAGTATTCTGGCCTATAATGCATCTCTCTCATCTAATCATAAGGGAATAGCAAAGAGAAAATA--CGGAAATTTCTGTCTG--------GG--AAAAAAAAAAG-TATATTGGGAAGAAC-TCT i saiBol1.JH378140 I 12 C 0 s cebCap1.NW_016107335v1 4935430 209 - 11686629 aagaaatttggcaacagcctga--ccaggtgatt-------------tccacgagggaaacaggaataatgggtgtttccagctctgatatcttgaagat-gcatcagcactttgcagtattctggcctataatgcatacctctcatctaatcataagggaatagcaaagacaaaATG--GGGAAATTTCTGTTTG--------GA--AAAAAAAAAAG-TATATTGGGAAGAAG-TCT i cebCap1.NW_016107335v1 I 3 C 0 s aotNan1.NW_018506100v1 3285624 211 - 4527795 aagaaatttggcaacagcctaa--ccaggtgatt-------------tccacgagagaaaaaggaataatgggtgtttccagctgtgataccttgaagat-gcatcagcactttgcagtattctggcctataatgcatacctctcatctaatcatacgggaatagcaaagacaaaACG--GAGAAATTTCTGTTTG------AAAA--AAAAAAAAAAG-TATATTGGGAAGAAC-TCC i aotNan1.NW_018506100v1 I 1 C 0 s otoGar3.GL873572 5502861 200 - 12253515 TAGAAAAGGGATAAAAAAAGGAGTTCAGGAAATT-------------TTCCAAAGTAAAAG-----TAgtctgtaatcccagc----acttcctgaggccaaggtgagaaactcac----ttgaggccaagagttgaagatcagcct----------gggcaaagcagtgaACATGTGTCTGGGTTTTTATGTTTGTTTAAAAGGG--CAAAAGACATG-ACAACTAAACGGAGTATCT i otoGar3.GL873572 I 315 C 0 s canFam3.chr16 16069912 198 + 59632846 gagaaatttgacagcagcttga--ccaaattatcagaatgcacatcacctatgagggagat--gagcaccaggtgcctctagc-----------agaagc-acatcactactt--cagtattccagccaacaatgcaaaactct-atataattgtgaagaagtatca--gacaaaagt--agaa---------------aaaaaaa--aatcaaacaggttatgtggggaagaac-tgt i canFam3.chr16 I 11 C 0 e dasNov3.JH575209 1234783 7918 + 1922530 I e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e calJac3.chr8 33710990 2017 - 128169293 I a score=714080.000000 s hg38.chrUn_KI270746v1 65295 92 + 66486 ATTCTT-CAAAAATACCAAT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAGAACCTACTTGGAG-G------AAGGGGTAG-------ATtatgaaggact-gaagatcaaatgacataa s panTro5.chr7 156369264 92 + 166211670 ATTCTT-CAAAAATACCAAT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAGAACCTACTTGGAG-G------AAGGGGTAG-------gttatgaaggaca-taagatcaaatgacataa i panTro5.chr7 C 0 C 0 s panPan2.chr7 155982277 92 + 162613886 ATTCTT-CAAAAATACCAAT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAGAACCTACTTGGAG-G------AAGGGGTAG-------gttatgaaggaca-taagatcaaatgacataa i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102857096 92 + 110113093 ATTCTT-CAAAAATACCAAT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAGAACCTACTTGGAG-G------AAGGGGTAG-------gttatgacggaca-taagatcaaatgacataa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472043 92 + 185818997 ATTCTT-CAAAAATACCAAT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAGAACCTACTTGGAG-G------AAGGGGTAG-------GTTATGAATGACA-TAAGATCAAATGACATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184961712 92 + 192294377 ATTCTT-CAAAAATACCAAT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAGAACCTACTTGGAG-G------AAGGGGTAG-------GTTATGAATGACA-TAAGATCAAATGACATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7930402 92 + 15219753 ATTCTT-CAAAAATACCAAT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAGAACCTACTTGGAG-G------AAGGGGTAG-------GTTATGAATGACA-TAAGATCAAATGACATAA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9574579 92 + 11639508 ATTCTT-CAAAAATACCAAT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAGAACCTACTTGGAG-G------AAGGGGTAG-------GTTATGAATGACA-TAAGATCAAATGACATAA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120425954 92 + 127223203 ATCCTT-CAAAAATACCAAT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAGAACCTACTTGGAG-G------AAGGGGTAG-------GTTATGAACAACA-TAAGATCAAATGACATAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1552454 92 - 2854183 ATTCTT-CAAAAACACCAAT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAGAACCTACTTGGAG-G------AAGGGGTAG-------GTTATGAATGACA-TAAGATCAAATGACATAA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20259060 92 + 27496150 ATTCTT-CAAAAATAACAAT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAGAACCTACTTGGAG-G------AAGGGGTAG-------GTTATGAACGACG-TAAGATCAAATGACATAA i colAng1.NW_012115154v1 C 0 C 0 s saiBol1.JH378140 17048038 93 + 19594188 GTACTT-CAAAAATACCAGT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAAAACCTACTTGGAG-G------AAGTGGTAG-------gttatgaaggacattaagatcaaatgacgtaa i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4935639 93 - 11686629 GTACTT-CAAAAACACCAGT----------------------------------------------------------------------------------------------GACA---------AAAAC----------------------------------TAAATCCTAAAACCTACTTGGAG-G------AAGTGGTAG-------gttatgaaggacattaagatcaaatgacgtaa i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3285835 93 - 4527795 GTACTT-CAAAAATACCAGT----------------------------------------------------------------------------------------------GACA---------AGAAC----------------------------------TAAATCCTAAAACCTACTTGGAG-G------AAGTGGTAG-------gttatgaaggacattacgatcaaatgatgtaa i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5503061 80 - 12253515 ATTCTT---------------------------------------------------------------------------------------------------------------A---------GAGAC----------------------------------TGGATCCCAG--CCTATTTGAAG-GTCGGGAGAGGAGAAT-------GCTATGTGGGACA-TTAGATAAAGAGAAATAA i otoGar3.GL873572 C 0 I 253 s canFam3.chr16 16070110 229 + 59632846 atccttccaaaaatgtcaatatccaaaagacagagaaggactcaggaaattcagattaaaggagtccaaagtgagaaccaaaAAGAGTACCTTaaaaaaaaaaaaaaaaaaaaaaaaa---------aaaaCCTCCGAAAACAAAAAGAGTACCTTACCCTAGAAGTGGATCTTGGAACCTATATGGGGTG------GGGGGGTGGAGGAGAtgctatattggatg-ttatatcaagtgacaaaa i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1242701 106 + 1922530 ATTTTT-TAAAAATCCTGAA----------------------------------------------------------------------------------------------CATACTGTAATACCCAAC----------------------------------TGTAGACTAAATCTTGTTTGGGG-G------TGGAGGAAG--GGAATGTTATAAGGGATA-TTAGACCAGCTGACAAAA i dasNov3.JH575209 I 7918 C 0 e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e calJac3.chr8 33710990 2017 - 128169293 I a score=660929.000000 s hg38.chrUn_KI270746v1 65387 98 + 66486 ctgtaatatggctggtacattagataaacatac-ggcattgatgtaagtttaggaatttgatagcaggattgtga-tttttaaagaatattcctactatt s panTro5.chr7 156369356 98 + 166211670 ctggaatatggctagtacattagataaacatac-tacattgatgtaagtttaggaagttgatagcaggattgtga-ttttttaagaatattcctactatt i panTro5.chr7 C 0 C 0 s panPan2.chr7 155982369 98 + 162613886 ctggaatatggctagtacattagataaacatac-tacattgatgtaagtttaggaagttgatagcaggattgtga-ttttttaagaatattcctactatt i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102857188 92 + 110113093 ctggaatatggctagtatattagataaacatac-tacattgatgtaagtttaggaagttgatagcaagattgtga-ttttttaagaatattcc------t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472135 86 + 185818997 TTGGAATACGGC------------TAAACATAC-TACACTGATGTAAGTTTAGGAAGTTGACAGCAGGattgtga-ttttttaagaatatttctattatt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184961804 86 + 192294377 TTGGAATACGGC------------TAAACATAC-TACACTGATGTAAGTTTAGGAAGTTGACAGCAGGattgtga-ttttttaagaatatttctattatt i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7930494 86 + 15219753 TTGGAATACGGC------------TAAACATAC-TACACTGATGTAAGTTTAGGAAGTTGACAGCAGGattgtga-ttttttaagaatatttctattatt i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9574671 86 + 11639508 TTGGAATACGGC------------TAAACATAC-TACACTGATGTAAGTTTAGGAAGTTGACAGCAGGattgtga-ttttttaagaatatttctattatt i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426046 86 + 127223203 TTGGAATACGGC------------TAAACATAC-TACACTGATGTAAGTTTAGGAAGCTGACAGCAGGattgtga-ttttttaagaatattcctattatt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1552546 86 - 2854183 TTGGAATATGGC------------TAAACATAC-TACACTGATGTAAGTTTAGGAAGTTGACAGCAGGattgtga-ttttttaagaatatttctattatt i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20259152 86 + 27496150 TTGGAATATGGC------------TAAACATAC-TACACTGATGTAAGTTTAGGAAGttgatagcaggattgtga-ttttttaagaatattcctattatt i colAng1.NW_012115154v1 C 0 C 0 s saiBol1.JH378140 17048131 99 + 19594188 ctggaacatggctagtacattagataaacacac-tacattggtgtaaatttatgaagttgatagcagtactgtgatttttgtaaggatatccctattatt i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4935732 98 - 11686629 ctggaacatggctagtacattagataaacacac-tacattggtataaatttataaagttgatagcagtactgtga-ttttgtaaagacatccctattatt i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3285928 98 - 4527795 ctggaacatggctagtacattagataaacacac-tacattggtgtaaatttatgaagttgatagcagtagtgtga-ttttgtaaggatattcctattatt i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16070339 99 + 59632846 ttgaaatatggataatagattagacgaaaatacttatgttgatgtaaacgtatgaagttgctaacagtgctttgc-ttatgtaaggatattcctattatt i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1242807 77 + 1922530 TTGGAATATGA------------------ATAG-AAGATTCAAGTA---CTATGAACAAgataacaatgctgtga-tgatataagcatatcccagttatt i dasNov3.JH575209 C 0 C 0 e rhiBie1.NW_016826791v1 841835 1788 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5503141 253 - 12253515 I e calJac3.chr8 33710990 2017 - 128169293 I a score=122160.000000 s hg38.chrUn_KI270746v1 65485 10 + 66486 aagaaataca s panTro5.chr7 156369454 10 + 166211670 aagaaataca i panTro5.chr7 C 0 C 0 s panPan2.chr7 155982467 10 + 162613886 aagaaataca i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102857280 10 + 110113093 aagaaataca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472221 10 + 185818997 aagaaataca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184961890 10 + 192294377 aagaaataca i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7930580 10 + 15219753 aagaaataca i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9574757 10 + 11639508 aagaaataca i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426132 10 + 127223203 aagaaataca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1552632 10 - 2854183 aagaaataca i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20259238 10 + 27496150 aagaaatata i colAng1.NW_012115154v1 C 0 C 0 s rhiBie1.NW_016826791v1 843623 10 - 1396338 aagaaataca i rhiBie1.NW_016826791v1 I 1788 I 65 s saiBol1.JH378140 17048230 10 + 19594188 aagaaataca i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4935830 10 - 11686629 aagaaataca i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3286026 10 - 4527795 aagaaataca i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16070438 10 + 59632846 aggaaataca i canFam3.chr16 C 0 I 35 s dasNov3.JH575209 1242884 10 + 1922530 aagaaataca i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5503141 253 - 12253515 I e calJac3.chr8 33710990 2017 - 128169293 I a score=397957.000000 s hg38.chrUn_KI270746v1 65495 64 + 66486 tactgaaa----tggtggt-----------------------------------------------------------------------------------------aaaaagg---cacaatgtatgtaattaatcctcaaatagtaggggttt-gggg s panTro5.chr7 156369464 65 + 166211670 tactgaaa----tggtggt-----------------------------------------------------------------------------------------aaaaagg---cacaacgtatgtaattaaccctcaaatagtagggggttagggg i panTro5.chr7 C 0 C 0 s panPan2.chr7 155982477 65 + 162613886 tactgaaa----tggtggt-----------------------------------------------------------------------------------------aaaaagg---cacaacgtatgtaattaaccctcaaatagtAGGGGGTTAGGGG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102857290 65 + 110113093 taccgaaa----tggtagt-----------------------------------------------------------------------------------------aaaaagg---cacaatgtatgtaattaatcctcgaatagtagggggttagggg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472231 64 + 185818997 tattgaaa----tagtggt-----------------------------------------------------------------------------------------aaaaagg---cgtaaggtatgtaattaaccctcaaatggtAGGGGACTGGGG- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184961900 64 + 192294377 tattgaaa----tagtggt-----------------------------------------------------------------------------------------aaaaagg---cgtaaggtatgtaattaaccctcaaatggtaggggactgggg- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7930590 64 + 15219753 tattgaaa----tagtggt-----------------------------------------------------------------------------------------aaaaagg---cgtaaggtatgtaattaaccctcaaatggtAGGGGACTGGGG- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9574767 64 + 11639508 tactgaaa----tagtggt-----------------------------------------------------------------------------------------aaaaagg---cataaggtatgtaattaaccctcaaatggtaggggactgggg- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426142 64 + 127223203 tactgaaa----tagtggt-----------------------------------------------------------------------------------------aaaaagg---cgtaaggtatgtaattaaccttcaaatggtaggggactgggg- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1552642 64 - 2854183 tactgaaa----tagtggt-----------------------------------------------------------------------------------------aaaaagg---cgtaaggtatgtaattaaccctcaaatggtaggggactgggg- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20259248 64 + 27496150 tactgtaa----tagtggt-----------------------------------------------------------------------------------------aaaaagg---cataaagtatgtaattaaccctcaaatggtAGGGGACTGGGG- i colAng1.NW_012115154v1 C 0 I 1 s saiBol1.JH378140 17048240 68 + 19594188 tactgaaacatttagtggt-----------------------------------------------------------------------------------------aaaaagg---tacaatgtatgtaattaaccctcaaatggtagggggttgggg- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4935840 68 - 11686629 tactgaaacatttagtgtt-----------------------------------------------------------------------------------------aaaaagg---tacaatgtatgtaattaaccctcaaatggtagggggttgggg- i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3286036 68 - 4527795 tattgaaacatttagtggt-----------------------------------------------------------------------------------------aaaaagg---tacaatgtatgtaattaaccctcaaatggtagggggttggag- i aotNan1.NW_018506100v1 C 0 C 0 s canFam3.chr16 16070483 147 + 59632846 taccagga----tggagtcccacattgggctcccctcaaggagcctgcttctccctctgcctaggtctctctgtctctcatgaataaataaatacaatcttaaaaaaaaaAAAAA---AAAAAAACagtaaatacacactgaagtgtttagggg------- i canFam3.chr16 I 35 I 1 s dasNov3.JH575209 1242894 61 + 1922530 cactgaaacatttaggggt-----------------------------------------------------------------------------------------aaaagagatatgaagtatatgtaatt-gtcttcaaatggaatg---------- i dasNov3.JH575209 C 0 C 0 e rhiBie1.NW_016826791v1 843633 65 - 1396338 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5503141 253 - 12253515 I e calJac3.chr8 33710990 2017 - 128169293 I a score=10500.000000 s hg38.chrUn_KI270746v1 65559 1 + 66486 g s panTro5.chr7 156369529 1 + 166211670 g i panTro5.chr7 C 0 C 0 s panPan2.chr7 155982542 1 + 162613886 G i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102857355 1 + 110113093 g i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472295 1 + 185818997 G i rheMac8.chr3 C 0 I 1 s macFas5.chr3 184961964 1 + 192294377 g i macFas5.chr3 C 0 I 1 s macNem1.NW_012015910v1 7930654 1 + 15219753 G i macNem1.NW_012015910v1 C 0 I 1 s cerAty1.NW_012008583v1 9574831 1 + 11639508 g i cerAty1.NW_012008583v1 C 0 I 1 s chlSab2.chr21 120426206 1 + 127223203 g i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012102765v1 1552706 1 - 2854183 g i manLeu1.NW_012102765v1 C 0 I 1 s colAng1.NW_012115154v1 20259313 1 + 27496150 G i colAng1.NW_012115154v1 I 1 C 0 s rhiBie1.NW_016826791v1 843698 1 - 1396338 g i rhiBie1.NW_016826791v1 I 65 N 0 s saiBol1.JH378140 17048308 1 + 19594188 g i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4935908 1 - 11686629 g i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3286104 1 - 4527795 g i aotNan1.NW_018506100v1 C 0 C 0 e dasNov3.JH575209 1242955 0 + 1922530 C e canFam3.chr16 16070630 1 + 59632846 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5503141 253 - 12253515 I e calJac3.chr8 33710990 2017 - 128169293 I a score=11598.000000 s hg38.chrUn_KI270746v1 65560 5 + 66486 aatag s panTro5.chr7 156369530 5 + 166211670 aatag i panTro5.chr7 C 0 C 0 s panPan2.chr7 155982543 5 + 162613886 AATAG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102857356 5 + 110113093 aatag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472297 5 + 185818997 AATAG i rheMac8.chr3 I 1 C 0 s macFas5.chr3 184961966 5 + 192294377 aatag i macFas5.chr3 I 1 C 0 s macNem1.NW_012015910v1 7930656 5 + 15219753 AATAG i macNem1.NW_012015910v1 I 1 C 0 s cerAty1.NW_012008583v1 9574833 5 + 11639508 aatag i cerAty1.NW_012008583v1 I 1 C 0 s chlSab2.chr21 120426208 5 + 127223203 aatag i chlSab2.chr21 I 1 C 0 s manLeu1.NW_012102765v1 1552708 5 - 2854183 aatag i manLeu1.NW_012102765v1 I 1 C 0 s colAng1.NW_012115154v1 20259314 5 + 27496150 GATAG i colAng1.NW_012115154v1 C 0 C 0 s saiBol1.JH378140 17048309 2 + 19594188 aa--- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4935909 4 - 11686629 aaaa- i cebCap1.NW_016107335v1 C 0 I 8 s aotNan1.NW_018506100v1 3286105 4 - 4527795 gaag- i aotNan1.NW_018506100v1 C 0 I 8 s canFam3.chr16 16070631 5 + 59632846 aaagg i canFam3.chr16 I 1 C 0 s dasNov3.JH575209 1242955 2 + 1922530 ---ag i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5503141 253 - 12253515 I e calJac3.chr8 33710990 2017 - 128169293 I a score=-9267.000000 s hg38.chrUn_KI270746v1 65565 14 + 66486 ---agacacacagac------ac s panTro5.chr7 156369535 12 + 166211670 ---agacaaa--aac------ac i panTro5.chr7 C 0 C 0 s panPan2.chr7 155982548 12 + 162613886 ---AGacaaa--aac------ac i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102857361 12 + 110113093 ---caacaca--aac------ac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472302 7 + 185818997 ---AGacaca------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184961971 7 + 192294377 ---agacaca------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7930661 7 + 15219753 ---AGacaca------------- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9574838 7 + 11639508 ---agacaca------------- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426213 7 + 127223203 ---agacaca------------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1552713 7 - 2854183 ---agacaca------------- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20259319 7 + 27496150 ---AGacaca------------- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33713007 10 - 128169293 -----acaca--gac------ac i calJac3.chr8 I 2017 C 0 s cebCap1.NW_016107335v1 4935921 12 - 11686629 ---agacaca--gac------ac i cebCap1.NW_016107335v1 I 8 C 0 s aotNan1.NW_018506100v1 3286117 12 - 4527795 ---agacaca--gac------ac i aotNan1.NW_018506100v1 I 8 C 0 s canFam3.chr16 16070636 18 + 59632846 ---ggacaca--gtctatgtaac i canFam3.chr16 C 0 I 2 s dasNov3.JH575209 1242957 9 + 1922530 agaagacat-------------- i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 94906 12454 + 204143 I e otoGar3.GL873572 5503141 253 - 12253515 I e saiBol1.JH378140 17048311 0 + 19594188 C a score=3875641.000000 s hg38.chrUn_KI270746v1 65579 458 + 66486 aca----cacataca----cacac--------acacacacacacacac------aga--------gaaagtgagagagggcatgcccaatgataatgaaatgctaacaacagatatatctaagtaaatgggatatgggtattatttttattttttccaactttt---agagtttgaacatattttcaagtaaaaaCTTTCT---AAAAATGCATAACATACCAAAGAACAGACATTCTTGAGATAAAAATAGGAAAAAGAAACCT-ATCTGA----CAATGACTGGTTTACAATAAAGAT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-ACCCCACTC---------------CAGC-TCACC-----------------------------------------------------AGGGAGCAGccccaaactagact-----gacagccccgtgggggcacactgatttgccccaacatctccagccttcactacagtggtgttcgcacacagt-aaacactcaaatgttaaatgcaaacaaatgaGCAAATTATGACTCAAGACTACAGAGAGAACTACAGAAGAAT s panTro5.chr7 156369547 454 + 166211670 aga----cacacacg----cacac--------acacacacacacacac------aga--------gaaagcaagagagggcatgcccagtgacaatgaaatgctaacaactgataaatctaagtaaatgggacatgggtattatttttattttctccaactttt---agagtttgaacttattttcaagtaaaaaCTTTCT---AAAAACACGTAACATACCAACAAACAGACATTCTTGAGATAAAAATAGGAAAAAGAAACCT-ATCTGA----CAATGACTGGTTTACAATAAAGAT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-CCCCCACTC---------------CAGC-TCACC-----------------------------------------------------AGGGAGCAGCCCCAAACTAGACT-----GACAGCCCCGTGGGGGCACACTGATTTGCCCCAACATCTCCAGCCTTCACTACAGT----TTCACACACAGT-AAACACTCAAAAGTTAAATGCAAACAAATGAGCAAATTATGACTCAAGACTACAGAGAGAACTACAGAAGAAT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155982560 458 + 162613886 aga----cacacgcgcgcacacac--------acacacacacacacac------aGA--------GAAAGCAAGAGAGGGCGTGCCCAgtgacaatgaaatgctaacaactgataaatctaagtaaatgggacatgggtattatttttattttctccaactttt---agagtttgaacttattttcaagtaaaaaCTTTCT---AAAAACACGTAACATACCAACAAACAGACATTCTTGAGATAAAAATAGGAAAAAGAAACCT-ATCTGA----CAATGACTGGTTTACAATAAAGAT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-CCCCCACTC---------------CAGC-TCACC-----------------------------------------------------AGGGAGCAGCCCCAAACTAGACT-----GACAGCCCCGGGGGGGCACACTGATTTGCCCCAACATCTCCAGCCTTCACTACAGT----TTCACACACAGT-AAACACTCAAAAGTTAAATGCAAACAAATGAGCAAATTATGACTCAAGACTACAGAGAGAACTACAGAAGAAT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102857373 454 + 110113093 aga----gacacaca----cacat--------acacacacacacacacagagagaga--------gaaagcaagagagggcatgcccagtgataatgaaatgctaacaactgataaatctaagtaaatgggatacgggtattatttttattttttccaactttt---agagtttgaacttattttcaagtaaaaaCTTTCG---AAAAACGCATAACATACCAACAAACAGACATTCTTGAGATAAAAATAGGAAAAAGAAACCT-ATCTGA----CAATGACTGGT----------GAT-----------------------------------------------------------------------------------------------CTTG-----------------------------------------------AAAAGATCA-CCCCCACTC---------------CAGC-TCACT-----------------------------------------------------AGGGAGTAGCCCCAAACTAGACT-----GACAGCCCCGTGGGGGCACACTGATTTGCCCCAACATCTCCAGCCTTCACTACAGTGATGTTCGCACACAGT-AAACATTCAAATGTTAAATGCAAACAAATGAGCAAATTATGACTCAAGACTACAGAGAGAACTACAGAAGAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472309 435 + 185818997 -------------------cacat--------acatacacacac----------a----------------AAGTGAGGGCATGCCCAATGATAATGAAAAGCTAACAACTGATGAATCTAAGTAAATGGGATACGGGTATTATTTTTATTTTTTCCAACTTTT---AGAGTTTGGACTTATTTTCAAGTAAAAATTTTCT---AAAAATGCATAACACACCAACAGACAGACATTCTTGAGATAAAAATAGGACAAAGAAACCT-ATCTGA----CAACGACTGGTTTACAATAAAGAT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-CCCCGACTC---------------CAGT-TCACT-----------------------------------------------------AGAGAGCAGCCCCAAACTAGACC-----GACAGCCCCTTGGGGGCACACCGATTTGCCCCCACATCTCCAGCCTTGACCACAGTGATATTCACACACAGT-AAACACTCAAATGTTAAATGCAAACAAATGAGCAAATTATGACTCAAGACTACAGAGAGAACTACAGAAGAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184961978 435 + 192294377 -------------------cacat--------acatacacacac----------a----------------aagtgagggcatgcccaatgataatgaaatgctaacaactgatgaatctaagtaaatgggatacgggtattatttttattttttccaactttt---agagtttgaacttattttcaagtaaaaaTTTTCT---AAAAATGCATAACACACCAACAGACAGACATTCTTGAGATAAAAATAGGACAAAGAAACCT-ATCTGA----CAACGACTGGTTTACAATAAAGAT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-CCCCGACTC---------------CAGT-TCACT-----------------------------------------------------AGAGAGCAGCCCCAAACTAGACC-----GACAGCCCCTTGGGGGCACACCGATTTGCCCCCACATCTCCAGCCTTGACCACAGTGATATTCACACACAGT-AAACACTCAAATGTTAAATGCAAACAAATGAGCAAATTATGACTCAAGACTACAGAGAGAACTACAGAAGAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7930668 437 + 15219753 -------------------cacat--------acatacacacac----------a----------------AAGTGAGGGCATGCCCAATGATAATGAAATGCTAACAACTGATGAATCTAAGTAAATGGGATACGGGTATTATTTTTATTTTTTCCAACTTTT--AAGAGTTTGAACTTATTTTCAAGTAAAAATTTTCT---AAAAATGCATAACACTCCAACAGACAGACATTCTTGAGATAAAAATAGGACAAAGAAACCT-ATCTGA----CAACGACCGGTTTACAATAAAGAT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCACCCCCGACTC---------------CAGT-TCACT-----------------------------------------------------AGAGAGCAGCCCCAAACTAGACC-----GACAGCCCCTTGGGGACACACCGATTTGCCCCCACATCTCCAGCCTTGACCACAGTGATATTCACACACAGT-AAACACTCAAATGTTAAATGCAAACAAATGAGCAAATTATGACTCAAGACTACAGAGAGAACTACAGAAGAAT i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9574845 435 + 11639508 -------------------cacat--------acatacacacac----------a----------------aagtgagggcatgcccaatgataatgaaatgctaacaactgatgaatctaagtaaatgggatacgggtattatttttattttttccaactttt---agagtttgaacttattttcaagtaaaaaTTTTCT---AAAAATGCATAATACACCAACAGACAGACATTCTTGAGATAAAAATAGGACAAAGAAACCT-ATCTGA----CAACGACTGGTTTACAATAAAGAT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-CCCCGACTC---------------CAGT-TCACT-----------------------------------------------------AGAGAGCAGCCCCAAACTAGACC-----GACAGCCCCTTGGGGGCACACCGATTTGCCCCCACATCTCCAGCCTTGACCACAGTGATATTCACACACAGT-AAACACTCAAATGTTAAATGCAAACAAATGAGCAAATTATGACTCAAGACTACAGAGAGAACTACAGAAGAAT i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426220 435 + 127223203 -------------------cacat--------acacacacacag----------a----------------aagtgagggcatgcccaatgataatgaaatgctaacaactgatgaatctaagtaaatgggatatgagtattatttttattttttccaactctt---agcgtttgaacttattttcaagtaaaaaTTTTCT---AAAAATGCATAACACACCAACAGACAGACATTCTTGAGATAAAAATAGGACAAAGAAACCT-ATCTGA----CAACGACTGGTTTATAATAAAGAT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-CCCCGACTC---------------CAGT-TCACT-----------------------------------------------------AGAGAGCAGCCCCAAACTAGACC-----GACAGCCCCTTGGGGGCACACCGATTTGCCCCCACATCTCCAGCCTTGACCACAGTGATATTCACACACAGT-AAACACTCAAATGTTAAATGCAAACAAATGAGCAAATTATGACTCAAGACTACAGAGAGAACTACAGAAGAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1552720 435 - 2854183 -------------------cacat--------acatacacacac----------a----------------aagtgagggcatgcccaatgataatgaaatgctaacaactgatgaatctaagtaaatgggatatgggtattatttttattttttccaactttt---agagtttgaacttattttcaagtaaaaGTTTTCT---AAAAATGCATAACACACCAACAGACAGACATTCTTGAGATAAAAATAGGACAAAGAAACCT-ATCTGA----CAATGACTGGTTTACAATAAAGAT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-CCCCGACTC---------------CAGT-TCACT-----------------------------------------------------AGAGAGCAGTCCCAAACTAGACC-----GACAGCCCCTTGGGGGCACACCGATTTGCCCCCACATCTCCAGCCTTGACCACAGTGATATTCACACACAGT-AAACACTCAAATGTTAAATGCAAACAAATGAGCAAATTATGACTCAAGACTACAGAGAGAACTACAGAAGAAT i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20259326 439 + 27496150 -------------------cacat--------acatacacacacacaG------A----------------AAGTGAGGGCATGCCCAATGATAATGAAATGCTAACAACTGATGAATCTAAGTAAATGGGATATGGGTATTATTTTTATTTTTTACAACTTTT---AGAGTTTGAACTTATTTTCAAGTAAAAATTTTCT---AAAAATGCATAACATACCAACAGACAGACATTCTTGAGATAAAAATAAGACAAAGAAACCT-ATCTGA----CAATGACTGGTTTACAATAAAGAT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-CCCCGACTC---------------CAGT-TCCCT-----------------------------------------------------AGAGAGCAGCCCCAAACTAGACT-----GACAGCCCCTTGGGGGCACACCGATTTGCCCCCACATCTCCAGCCTTGACCACAGTGATATTCACACACAGT-AAACACTCAAATGTTAAATACAAACAAGTGAGCAAATTATGACTCAAGACTACAGAGAGAATTGCAGAAGAAT i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33713017 453 - 128169293 aca----gacacaca----gacac--------acagacacacagac--------a----------gaAAGTGAGAGCAGGCATGCCCAACGATAATGAAACTCTAACAACAGATGAATCTAAGTAAATGGGATATGAGTATTATTTTTATTTTTTCCAACTTTT---AGAGTTTGAAGTTATTTTTAAGTTAAAACTTTTTTTAAAAAATGTATTAC-----CACAGACAAACATTCTTGAGATAAAAATGGGAAAAAGAAAGCT-ACCTGA----CAATAACTGGTTTACAACAAATAC-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-CCCACACTC---------------CAGCCTCACT-----------------------------------------------------AGGGAACAGCCCCAAACTAGACT-----GACAACCCCTTGAGGGCAAACTGATTTGCCCCAGCATCTCCAGCCTTCACCACAGTGATGTTCACACACAAT-AAACACTCAAATGTTAAATGCAAACAAATGAGCAGATCATGACCAAAGACTACAGAGAGAACTACAGAAGAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17048311 431 + 19594188 --------------a----gacac--------acacacacacag----------a----------gaaagtgagagcgggcatgcccaacaataatgaaatgctaacaacagatgaatataagtaaatgggatatgagtattatt----ttttttccaactttt---agagtttgaagttatttttaagtaaaaaCTTTTTTAAAAAAATGTATTGC---------AACAAACATTCTTGAGATAAAAATGGGAAAAAGGAACCT-ACTTGA----CAATAACTGATTTACAACAAATAC-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAACATCA-CCCACACTC---------------CAGCCTCACT-----------------------------------------------------AGGGAACAGCCCCAAACTAGACT-----GACAACCCCTTGAGGGCAAACCAATTTGCCCCAGCATCTCCAGCCTTCACCACAGTGATGTTCACACACAGT-AAACACTCAAACGTTAAATGCAAACAAATGAGCAGATTGTGACCAAAGACTAC--AGAGAACTACAGAAGAAT i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4935933 442 - 11686629 aca----gacacaca----gacac--------acacagacacac----------a----------gaaagtgagagcaggcatgcccaacaataatgaaatgctaacaacagatgaatctaagtaaatgggatatgagtattatttttattttttccaactttt---agagtttcaagttatttttaagtaaaaaTTTTTTTTAAAAAATGTATAAC--------AGACAAA-ATTCTTGAGATAAAAATGGGAAAAAGAA-----ACCTGA----CAATAACTGATTTACAACAAATAC-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-TCCACAGTC---------------CAGCCTCACT-----------------------------------------------------AGGGAGCAGCCCCAAACTAGACT-----GACAACCCCTTGAGGGCAAACCAATTTGCCCCAGCATCTCCAGCC-TCACCACAGTGATGTTCACATACAGT-AAACACTCAAATGTTAAACGCAAACAAATGAGCAGCTTATGACCAAAGACTACAGAGAGAACTACAGAAGAAT i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3286129 453 - 4527795 --------agacaca----gacac--------acggacacacacac--------a----------gaaagtgagagcgggcatgcccaacaataatgaaatgctaacaacagatgaatctaagtaaatggggtatgagtattatttttattttttccaactttt---agagtttgaagttatttttaagttaaaaCTTTTTTTAAAAAATGTATTAC-----AACAGACAAACATTCTTGAGATAAAAATGGGAAAAAGAAACCT-ACCTGACAATCAATAACTGGTTTACAACAAATAC-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATCA-CCCACATTC---------------CAGTCTCACT-----------------------------------------------------AGGGAACAGCCCCAAACTAGACT-----GACAACGCCTTGAGGGCAAATCAATTTGCCCCAGCATCTCCAGCCTTCACCACAGTGATGCTGACACACAGT-AAACACTCAAATGTCAAATGCAAACAAATGAGCATATTATGACCAAAGACTACAGAGAGAACTACAGAAGAAT i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5503394 638 - 12253515 ACAGCCTGACAGAGA----CACAG--------ACACCAACATAC----------A----------GAAG--AAGAAAGGGCATTC------ACAATAAAATGCTAACTACAGATGAACCTAAGTAAATGGCATACG-------TTATTACTTTTTTCCAAATTT---AGAGGTTAAAATTATTTGCAAATAAAAACTTTTT-TAAAAAATAC--------CCAAATACTTGGCACTCTTGAGAGAATTA-GGAAAAAAGACATCT-ACCTAA----CAATGACTGGTGTTCAATAAAGATGGCCCCAggccaggtgcagtggcttgtacccgtaatcctagcattctgggaggctgaggcaggtggattgcttgagctcacaggtttgagaccagcctgagcaagagtgaggcactatctctactaaaaatagaaaaactgaggaaaaaggatcg-cttgagcccaagacttggaggttgctgt-taactatgacacccagggcgacagcttgatcctgtctcaGAGAGAGAGAGAGACAAAGAGAGATCAGCCTCACTCCAGCCCCTCTAGACA--CCCACGAGGGAAATCCAA-ATGCTCCAGCAACTCCAGCCTGCACCACAGTGAAGGCAACCCTCAGT-AAGCCCTCAAATGTTAAAT------AAATGAACAAATTATGACTAAAGACTGC--AGAGAACTGTGAAAGAAT i otoGar3.GL873572 I 253 C 0 s canFam3.chr16 16070656 434 + 59632846 ----------accct----caaatggttcagggcaaaaaaacag----------agatgggagggaagaagaagaaagggtacacacaatgatactaaaat-ctaacaaaggtaaaaagta--taaatggtatacaggtactatt------ttttctaacatct---aaagtttgaaattatttcaaaat-aaCGTTTTTT---AAAAAT-CATGATATACCAACACAAAAGCATTCTGGACAGAGAAACAGGAAAAAGAAACCTAACCTGA----CAATGACTGGACTAAAACAAAGTT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATTA-CCTGTACGT---------------CAGT------------------------------------------------------------GTGAGCAGcctca--caagtct-----gatacccccatgaaggcagacctatttgcctgttcatctctggcctccaccacggtgc--tttgcacacagt-aggccttcaaatgttaaat------aaatgaacgaatTATGACTAAAGACTATAGACA----TCTATGAGAAT i canFam3.chr16 I 2 C 0 s dasNov3.JH575209 1242966 394 + 1922530 ------------------------------------------------------------------acaataatagagcaaata---------ggtgaaatg---acaacaggtgaatctaggtaaaggttatatgggtattatttttgt-ttttccaactgttataaaagtttgaaattatttccaaataaaaccttttt--ctaaaaTGTATAATATGGCAACACACAGGTATTCCTGAGTGAGAAACAGAGGAAAGAGACCT-ACCTGA----CAATGCTTGGTATACAA-AAAGTT-----------------------------------------------------------------------------------------------CCTG-----------------------------------------------AAAAGATGT-ccc---------------------tcat-ttaca-----------------------------------------------------tgtgagctccct-------gaca-----gacacttctgtgagggcatacttaattgtccctgcatctccaacttccatcagagtgt--ttgacatatagcaaaaccctcaaatgtttgctac--atgaatgaatAAATTAAGACTAAAGATTAT--AGAGAACTATGgggaaat i dasNov3.JH575209 C 0 I 381 e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=1705210.000000 s hg38.chrUn_KI270746v1 66037 171 + 66486 TCAACAGCAGAGAAAGATGATCATTCTTCAAATGGTTCAAAGGACAAACCTTTCAATCCATGAAAAACTCTATGGTAACTGTTTCTgtacttactttgtgttaggcattgtgctgggcactttatagataccacttcattaaatccaacatccctgtgaggtaagtaccgt s panTro5.chr7 156370001 171 + 166211670 TTAACAGCAGAGAAAGATGATCACTCTTCAAATGGTTCAAAGTACAAACCTTTCAATCCATGAAAAACTCTATGGTAACTGTTTCTgtacttactttgtgttaggcattgtgctgggcactttatagataccacttcattaaatccaacatccctgtgaggtaagtaccat i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983018 171 + 162613886 TTAACAGCAGAGAAAGATGATCACTCTTCAAATGGTTCAAAGTACAAACCTTTCAATCCATGAAAAACTCTATGGTAACTGTTTCTgtacttactttgtgttaggcattgtgctgggcactttatagataccacttcattaaatccaacatccctgtgaggtaagtaccat i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102857827 171 + 110113093 TTAACAGCAGGGAAAGACAATCATTCTTCAAATGGTTCAAAGGACAAACCTTTCAATCCATGAAAAACTCTATGGTAACTGTTTCTgtacttactttgtgttagggattgtgctgggcactttatagataccacttcattaaatccaacatccctgtgaggtaagtaccgt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472744 171 + 185818997 TTAACAGCAGAGAAATACAATCATTCTTCAAATGGTTCAAAGGACAAACCTTCCAAACCATGAAAAACTCTATGGTAACTGTTTCTgtgcttactttgtgttaggcattgtgctgggcactttatagacaccacttcattaaatccaacacccctgtgaggtaactactat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184962413 171 + 192294377 TTAACAGCAGAGAAATACAATCATTCTTCAAATGGTTCAAAGGACAAACCTTCCAAACCATGAAAAACTCTATGGTAACTGTTTCTgtgcttactttgtgttaggcattgtgctgggcactttatagacaccacttcattaaatccaacacccctgtgaggtaactactat i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931105 171 + 15219753 TTAACAGCAGAGAAATACAATCATTCTTCAAATGGTTCAAAGGACAAACCTTCCAAACCATGAAAAACTCTATGGTAACTGTTTCTgtgcttactttgtgttaggcattgtgctgggcactttatagacaccacttcattaaatccaacacccctgtgaggtaactactat i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9575280 171 + 11639508 TTAACAGCAGAGAAATACAATCATTCTTCAAATGGTTCAAAGGACAAACCTTCCAAACCATGAAAAACTCTATGGTAACTGTTTCTgtgcttactttgtgttaggcattgtgctgcgcactttatagacaccacttcattaaatccaacacccctgtgaggtaactactat i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426655 171 + 127223203 TTAACAGCAGAGAAATACAATCATTCTTCAAATGGTTCAAAGGACAAACCTTCCAAACCATGAAAAACTCTATGGTAACTGTTTCTgtgcttactttgtgttaggcattgtgctgggcactttatagacaccacttcattaaatccaacacccctgtgaggtaactactat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1553155 171 - 2854183 TTAACAGCAGAGAAATACAATCATTCTTCAAATGGTTCAAAGGACAAACCTTCCAAACCATGAAAAACTCTACGGTAACTGTTTCTgtgcttactttgtgttaggcattgtgctgcgcactttatagacaccacttcattaaatccaacacccctgtgaggtaactactat i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20259765 171 + 27496150 TTAACAGCAGAGAAATACAATCATTCTTCAAATGGTTCAAAGGACAAACCTTCCAAACCATGAAAAACTCTATGGTAACTGTTTCTgtgcttactttgtgttaggcattgtgctgggcactttatagacaccacttcattaaatccaacatccctgtgaggtaacgactat i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33713470 168 - 128169293 TTAACAGCAGAGGAAGATGATCATTCTTCAAATGGGTCAAAGGACAAACCTTTCAAACCATGAAAAACTC--TGATAACTGTTTCTgtacttactttgtattaggca-tgtgctgggcactttatagataccaccgtattaaatccaacatccctgtgaggtaagtaccat i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17048742 171 + 19594188 TTAACAGCAGAGGAAGACAATCATTCTTCAAATGGGTCAAAGGACAAACCTTTCAAACCATGAAAAACTCTATGATAACTGTTTCTgtacttactttgtattaggcactgtgctgggcactttatagataccacctcattaaatccaacattcctgtgaggtaaataccat i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4936375 171 - 11686629 TTAACAGCAGAGGAAGACGACCATTCTTCAAATGGGTCAAAGGACAAACCTTTCAAACCATGAAAAACTCTATGATAACTGTTTCTgtacttactctgtattaggcattgtgctgggtactttatagacaccacctcattaaatccaacatccctgtgaggtaagtaccat i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3286582 171 - 4527795 TTAACAGCAGAGGAAGATGATCATTCTTCAAATGAGTCAAAGGACAAACCTTTCAAACCATGAAAAACTCTATGATAACTGTTTCTgtacttactttgtattaggtattgtgctgggcactttatagataccacctcattaaatccaacatccctgtgaggtaagtaccat i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5504032 151 - 12253515 TTAACAACAGAGGATCAGGATCATTCTTCAAATTAA-CAATAAATAAACCTTCCTAT-----GAAAACTCCACAATGATTAACAGGGCGTTTACTCTGCATTATGCATTATGCTGGGCACGTTGTGGAC-------------ATCCAGCATCCCAGTGA-GTGAACCCTAT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16071090 149 + 59632846 TTAACAGTAGAGGAAGAGAATTATTCTT---------CAGTGGATAAGCCT--------ATGAAAAACTCTAGGATAATTCTTTGACTATTTAAT-----TTAGACATAACAAGGGAcaccttataggcatcatcttactaaatccaacaccctgatgaggtaagttctac i canFam3.chr16 C 0 C 0 s dasNov3.JH575209 1243741 98 + 1922530 TTAGCAGCAGAGGCAGAGGATCATTCTTCAACT------------------------------------------------------------TTTTGAGTTA-------------ACACTTATTATGTATCATTTTGTTAAATCCAACATTCCTGTATGTTAAAGACTGT i dasNov3.JH575209 I 381 I 1543 e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=511088.000000 s hg38.chrUn_KI270746v1 66208 51 + 66486 taaccttctatac---------actgacttagggaagttaaacaggtagccaaagatcat s panTro5.chr7 156370172 51 + 166211670 taaccttctatac---------actgacttagggaagttaaacaggtagccaaagatcat i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983189 51 + 162613886 taaccttctatac---------actgacttagggaagttaaacaggtagccaaagatcat i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102857998 51 + 110113093 taaccttctatac---------actgacttagggaagttaaataggtagccaaagatcat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472915 51 + 185818997 taaccttctatac---------actgacttacggaagttatataggtagccaaagatcat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184962584 51 + 192294377 taaccttctatac---------actgacttacggaagttatataggtagccaaagatcat i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931276 51 + 15219753 taaccttctatac---------actgacttacggaagttatataggtagccaaagatcat i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9575451 51 + 11639508 taaccttctatac---------actgacttacagaacttatataggtagccaaagatcat i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426826 51 + 127223203 taaccttctatac---------actgacttacggaagttatataggtagccaacgatcat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1553326 51 - 2854183 taaccttctatac---------actgacttacggaacttatataggtagccaaagatcat i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20259936 51 + 27496150 taaccttctatac---------actgacttagggaagttatataggtagccaaagatcat i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33713638 51 - 128169293 taaccttctatat---------actgacttagggaagtcaaataggtagccaaagatcat i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17048913 51 + 19594188 taaccttctatat---------actgacttagggaagtcaaataggtagccaaagatcat i saiBol1.JH378140 C 0 I 332 s cebCap1.NW_016107335v1 4936546 51 - 11686629 taaccttctatat---------gctgacttacggaagtcaaataggtagccaaagatcat i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3286753 51 - 4527795 taaccttctatat---------acttacttagggaaatcaaataggtagccaaaaatcat i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5504183 51 - 12253515 TCACATTCTATTC---------GTTGGCTTGGGAAAGTCAAATAACCAACCATGGGTCAT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16071239 60 + 59632846 taaccttctctacaggggaaaaactggcttaaggaagtcaaatattttgccaaagttcct i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1243839 1543 + 1922530 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=48314.000000 s hg38.chrUn_KI270746v1 66259 7 + 66486 caattta s panTro5.chr7 156370223 7 + 166211670 caattta i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983240 7 + 162613886 caattta i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102858049 7 + 110113093 aaattta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472966 7 + 185818997 aaattta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184962635 7 + 192294377 aaattta i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931327 7 + 15219753 aaattta i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9575502 7 + 11639508 aaattta i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426877 7 + 127223203 aaattta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1553377 7 - 2854183 aaattta i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20259987 7 + 27496150 aaattta i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33713689 7 - 128169293 aaattaa i calJac3.chr8 C 0 I 325 s saiBol1.JH378140 17049296 7 + 19594188 caacaaa i saiBol1.JH378140 I 332 C 0 s cebCap1.NW_016107335v1 4936597 7 - 11686629 aaattaa i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3286804 7 - 4527795 aaattaa i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5504234 7 - 12253515 ATCTTTA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16071299 7 + 59632846 gtattta i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1243839 1543 + 1922530 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=104191.000000 s hg38.chrUn_KI270746v1 66266 12 + 66486 gtaactgaaaaa s panTro5.chr7 156370230 12 + 166211670 gtaactgaaaaa i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983247 12 + 162613886 gtaactgaaaaa i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102858056 12 + 110113093 gtaattgaaaaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472973 12 + 185818997 ataattgaagaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184962642 12 + 192294377 ataattgaagaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931334 12 + 15219753 ataattgaagaa i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9575509 12 + 11639508 ataattgaagaa i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426884 12 + 127223203 ataattgaagaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1553384 12 - 2854183 ataattgaagaa i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20259994 12 + 27496150 ataactgaaaaa i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33714021 12 - 128169293 gtaactgaaaaa i calJac3.chr8 I 325 C 0 s saiBol1.JH378140 17049303 12 + 19594188 gtaactgaaaaa i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4936604 12 - 11686629 gtaactgaaaaa i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3286811 12 - 4527795 gtaactgaaaaa i aotNan1.NW_018506100v1 C 0 I 318 s otoGar3.GL873572 5504241 8 - 12253515 TTAACAGA---- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16071306 12 + 59632846 gtaactggaaaa i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1243839 1543 + 1922530 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=5658.000000 s hg38.chrUn_KI270746v1 66278 1 + 66486 a s panTro5.chr7 156370242 1 + 166211670 a i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983259 1 + 162613886 a i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102858068 1 + 110113093 a i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472985 1 + 185818997 g i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184962654 1 + 192294377 g i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931346 1 + 15219753 g i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9575521 1 + 11639508 g i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426896 1 + 127223203 g i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1553396 1 - 2854183 g i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20260006 1 + 27496150 g i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33714033 1 - 128169293 g i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17049315 1 + 19594188 g i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4936616 1 - 11686629 g i cebCap1.NW_016107335v1 C 0 C 0 s otoGar3.GL873572 5504249 1 - 12253515 G i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16071318 1 + 59632846 g i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1243839 1543 + 1922530 I e tarSyr2.KE936121v1 94906 12454 + 204143 I e aotNan1.NW_018506100v1 3286823 318 - 4527795 I a score=15051.000000 s hg38.chrUn_KI270746v1 66279 2 + 66486 ct- s panTro5.chr7 156370243 2 + 166211670 ct- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983260 2 + 162613886 ct- i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102858069 2 + 110113093 ct- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472986 2 + 185818997 ct- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184962655 2 + 192294377 ct- i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931347 2 + 15219753 ct- i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9575522 2 + 11639508 ct- i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426897 2 + 127223203 ct- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1553397 2 - 2854183 ct- i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20260007 2 + 27496150 tt- i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33714034 2 - 128169293 ct- i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17049316 2 + 19594188 ct- i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4936617 2 - 11686629 ct- i cebCap1.NW_016107335v1 C 0 I 337 s aotNan1.NW_018506100v1 3287141 2 - 4527795 ct- i aotNan1.NW_018506100v1 I 318 C 0 s otoGar3.GL873572 5504250 2 - 12253515 CT- i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16071319 2 + 59632846 -tg i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1243839 1543 + 1922530 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=200187.000000 s hg38.chrUn_KI270746v1 66281 20 + 66486 gcagtttgactccacagcat s panTro5.chr7 156370245 20 + 166211670 gcaatttgactccaCAGCAT i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983262 20 + 162613886 gcaatttgactccaCAGCAT i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102858071 20 + 110113093 gcaatttgactccacagcat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178472988 20 + 185818997 gaaatttgactccacagcat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184962657 20 + 192294377 gaaatttgactccacagcat i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931349 20 + 15219753 gaaatttgactccacagcat i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9575524 20 + 11639508 gaaatttgactccacagcat i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426899 20 + 127223203 gaaatttgactccacagcat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1553399 20 - 2854183 gaaatttgactccacagcat i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20260009 20 + 27496150 gcaatttgactccacagcat i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33714036 20 - 128169293 gcaatttgactcgacagcat i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17049318 20 + 19594188 gcaatttgactcgacagcat i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4936956 20 - 11686629 gcaatttgactcaacagcat i cebCap1.NW_016107335v1 I 337 C 0 s aotNan1.NW_018506100v1 3287143 20 - 4527795 gcaatttgactcgacagcat i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5504252 20 - 12253515 AAAATTTGATTCTGCGCCCT i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16071321 20 + 59632846 gagatctggctccacagctg i canFam3.chr16 C 0 C 0 e dasNov3.JH575209 1243839 1543 + 1922530 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=393827.000000 s hg38.chrUn_KI270746v1 66301 40 + 66486 aaccttt-aaccaccacactatagtgCCTTCATAGAACAGA s panTro5.chr7 156370265 41 + 166211670 AAGCTTTGAACCACCACACTATAGTGCCTTCACAGAACAGG i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983282 41 + 162613886 AAGCTTTGAACCACCACACTACAGTGCCTTCACAGAACAGG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102858091 41 + 110113093 aagcttttaaccaccacactacagtgccTTCATAGAACAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178473008 41 + 185818997 aagcttttaaccaccacattatagtgCCTTCAAAGAACAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184962677 41 + 192294377 aagcttttaaccaccacattatagtgCCTTCAAAGAACAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931369 41 + 15219753 aagcttttaaccaccacattatagtgCCTTCAAAGAACAGA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9575544 41 + 11639508 aagcttttaaccaccacattatagtgCCTTCAAAGAACAGA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426919 41 + 127223203 aagcttttaaccaccacattacagtgCCTTCAAAGAACAGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1553419 41 - 2854183 aagcttttaaccaccacattatagtgCCTTCAAAGAACAGA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20260029 41 + 27496150 aagcttttaaccaccacattatagtgCCTTCATAGAACAGA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33714056 41 - 128169293 aagcttttaaccactacactctaGAGCCTTCACAGAACAGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17049338 41 + 19594188 aagcttttaaccactacactaTCGTACCTTCATAGAACAGA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4936976 41 - 11686629 aagctttttaccactacactattgtgccTTCATAGAACAGA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3287163 41 - 4527795 aagcttttaaccactacactatagtgccTTCATAGAACAGA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5504272 30 - 12253515 AA--TTTCAACC---------CAGTGCCTCCACAGAACAGA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16071341 36 + 59632846 AATCTTT----CACAACATTATA-TACCTCCATAGAACAGA i canFam3.chr16 C 0 I 11 s dasNov3.JH575209 1245382 38 + 1922530 -AGCTTTCAACCACCCTACTATACATCCTCCATTAAAAA-- i dasNov3.JH575209 I 1543 C 0 e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=83760.000000 s hg38.chrUn_KI270746v1 66341 9 + 66486 A-TAAAAAGA s panTro5.chr7 156370306 9 + 166211670 A-TAAAAAGA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983323 9 + 162613886 A-TAAAAAGA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102858132 9 + 110113093 A-TAGAAAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178473049 9 + 185818997 A-TAAAAAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184962718 9 + 192294377 A-TAAAAAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931410 9 + 15219753 A-TAAAAAGA i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9575585 9 + 11639508 A-TAAAAAGA i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426960 9 + 127223203 A-TAAAAAGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1553460 9 - 2854183 A-TAAAAAGA i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20260070 9 + 27496150 A-TAAAAAGA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33714097 9 - 128169293 A-TAAAAAGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17049379 9 + 19594188 A-TAAAAAGA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4937017 9 - 11686629 A-TAAAAAGA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3287204 9 - 4527795 A-TAAAAAGA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5504302 10 - 12253515 ATTTAAAAAA i otoGar3.GL873572 C 0 C 0 s dasNov3.JH575209 1245420 6 + 1922530 ----AAAATA i dasNov3.JH575209 C 0 C 0 e canFam3.chr16 16071377 11 + 59632846 I e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=871820.000000 s hg38.chrUn_KI270746v1 66350 86 + 66486 -TTAAGTATCCAATAGTATTCCCAGAAAT----TATGTA-ATCCTGTCACTCTC-AAAAGAGAATAGCAGATT---ACAAAGAGCAAATCGAAAA-G s panTro5.chr7 156370315 84 + 166211670 -TTAAGTATTCAATAGTATTCCCAGAAAT----TATGTA-ATTCTGTCACTCTC-AAAAGAGAATAGCAGATT---ACAAAGAGCAAAT-GAGAA-- i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983332 86 + 162613886 -TTAAGTATTCAATAGTATTCCCAGAAAT----TATGTA-ATTCTGTCACTCTC-AAAAGAGAATAGCAGATT---ACAAAGAGCAAAT-GAGAAAG i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102858141 87 + 110113093 -TTAAGTATCCAATAGTATTCCCAGAAAT----TATGTA-ATTCTGTCACTCTCAAAAAGAGAATAGCAGATT---ACAAACAGCAAAT-TAGAAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178473058 85 + 185818997 -TTAAGTACCCAATAGTATTCCCAGAAAT----TATGTA-ATTCTGTCACTCT--GAAAGAGAACAGCAGATT---ACAAAGAGCAAAT-TAGAAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184962727 85 + 192294377 -TTAAGTACCCAATAGTATTCCCAGAAAT----TATGTA-ATTCTGTCACTCT--GAAAGAGAACAGCAGATT---ACAAAGAGCAAAT-TAGAAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931419 85 + 15219753 -TTAAGTACCCAATAGTATTCCCAGAAAT----TATGTA-ATTCTGTCACTCT--GAAAGAGAACAGCAGATT---ACAAAGAGCAAAT-TAGAAAG i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9575594 85 + 11639508 -TTAAGTACCCAATAGTATTCCCAGAAAT----TATGTA-TTTCTGTCACTCT--GAAAGAGAACAGCAGATT---ACAAAGAGCAAAT-TAGAAAG i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120426969 85 + 127223203 -TTAAGTACCCAATAGTATTCCCAGAAAT----TATGTA-ATTCTGTCACTCT--GAAAGAGAGCAGCAGATT---ACAAAGAGCAAAT-TAGAAAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1553469 85 - 2854183 -TTAAGTACCCAATAGTATTCTCAGAAAT----TATGTA-TTTCTGTCACTCT--GAAAGAGAACAGCAGATT---ACAAAGAGCAAAT-TAGAAAG i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20260079 85 + 27496150 -TTAAGTATCCAATAGTATTCCCAGAAAT----TATGTA-ATTCTGTCACTCT--GAAAGAGAATAGCAGATT---ACAAAGAGCAAAA-CAGAAAG i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33714106 85 - 128169293 -TTAAGTAGTCAATAGTATTCTCAGAAAT----TATATA-ATTCTATCACTCT--GAAAGAGAAGAGCAGACT---ACAAAAAGCAAGT-TAGAAAG i calJac3.chr8 C 0 I 1 s saiBol1.JH378140 17049388 85 + 19594188 -TTAACTAGTCAATAGTATTCTCAGAAAT----TATATA-ATTCTGTCACTCT--GAAAGAGAACAGCAGATT---ACAAAGAGCAAGT-TAGAAAG i saiBol1.JH378140 C 0 I 1 s cebCap1.NW_016107335v1 4937026 85 - 11686629 -TTAAGTAGTCAATAGTATTCTCAGAAAT----TATATA-ATTCTGTCACTCT--GAAAGAGAACAGCAGATT---ACAAAGGGCAAGT-TAGAAAG i cebCap1.NW_016107335v1 C 0 I 1 s aotNan1.NW_018506100v1 3287213 85 - 4527795 -TTAAGTAGTCAATAGTATTCTCAGAAAT----TATATA-ATTCTGTCACTCT--AAAAGAGAACAGCAGATT---ACAAAGAGCAAGT-TAGAAAG i aotNan1.NW_018506100v1 C 0 I 1 s otoGar3.GL873572 5504312 85 - 12253515 -TTAAATACGCAATAGTATTCTCA-AAAT----TATATATAATCTGTCATTGT--GAAAGAGAATAGATTATC---ATAAAGAACAAAT-TAGTAAG i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16071388 92 + 59632846 -TTAACTATCCAGTTGTATTCTTAGCAATATTATACATG-ATTTAGTCACTGT--GATAGAGCATAGCAGACTATGATAGAGAGCAAAT-TAGTAAA i canFam3.chr16 I 11 I 1 s dasNov3.JH575209 1245426 90 + 1922530 TCAAACTATCCAACAGTATTCTCAGCAATATTATAAACG-ATATTGCCATTCT--TAAGGAGAATAGCAGACT---ATTTAGAGAAAAT-TAGTAAG i dasNov3.JH575209 C 0 C 0 e tarSyr2.KE936121v1 94906 12454 + 204143 I a score=6747.000000 s hg38.chrUn_KI270746v1 66436 1 + 66486 A s panTro5.chr7 156370399 1 + 166211670 A i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983418 1 + 162613886 A i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102858228 1 + 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178473143 1 + 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 184962812 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931504 1 + 15219753 G i macNem1.NW_012015910v1 C 0 C 0 s cerAty1.NW_012008583v1 9575679 1 + 11639508 G i cerAty1.NW_012008583v1 C 0 C 0 s chlSab2.chr21 120427054 1 + 127223203 G i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012102765v1 1553554 1 - 2854183 G i manLeu1.NW_012102765v1 C 0 C 0 s colAng1.NW_012115154v1 20260164 1 + 27496150 G i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33714192 1 - 128169293 G i calJac3.chr8 I 1 C 0 s saiBol1.JH378140 17049474 1 + 19594188 G i saiBol1.JH378140 I 1 C 0 s cebCap1.NW_016107335v1 4937112 1 - 11686629 G i cebCap1.NW_016107335v1 I 1 C 0 s aotNan1.NW_018506100v1 3287299 1 - 4527795 G i aotNan1.NW_018506100v1 I 1 C 0 s tarSyr2.KE936121v1 107360 1 + 204143 G i tarSyr2.KE936121v1 I 12454 N 0 s otoGar3.GL873572 5504397 1 - 12253515 A i otoGar3.GL873572 C 0 I 1 s canFam3.chr16 16071481 1 + 59632846 G i canFam3.chr16 I 1 C 0 s dasNov3.JH575209 1245516 1 + 1922530 A i dasNov3.JH575209 C 0 I 1 a score=359611.000000 s hg38.chrUn_KI270746v1 66437 37 + 66486 AGCACACCAAAGGGGAGAC--AGAACAAGCTGAGAAAGA s panTro5.chr7 156370400 37 + 166211670 AGCACACCAAAGGGGAGAC--AGAACAAGCTGAGAAAGA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983419 37 + 162613886 AGCACACCAAAGGGGAGAC--AGAACAAGCTGAGAAAGA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102858229 37 + 110113093 AGCACACCAAAGGGGAGAC--AGAACAAGCTCAGAAAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr3 178473144 37 + 185818997 AGCACACCAAAGGGGAGAC--ACAACAAGCTGAGAAAGA i rheMac8.chr3 C 0 N 0 s macFas5.chr3 184962813 37 + 192294377 AGCACACCAAAGGGGAGAC--ACAACAAGCTGAGAAAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012015910v1 7931505 37 + 15219753 AGCACACCAAAGGGGAGAC--ACAACAAGCTGAGAAAGA i macNem1.NW_012015910v1 C 0 N 0 s cerAty1.NW_012008583v1 9575680 37 + 11639508 AGCACACCAAAGGGGAGAC--ACAACAAGCTGAGAAAGA i cerAty1.NW_012008583v1 C 0 N 0 s chlSab2.chr21 120427055 37 + 127223203 AGCACACCAAAGGGGAGAC--ACAACAAGCTGAGAAAGA i chlSab2.chr21 C 0 N 0 s manLeu1.NW_012102765v1 1553555 37 - 2854183 AGCACACCAAAGGGGAGAC--ACAACAAGCTGAGAAAGA i manLeu1.NW_012102765v1 C 0 N 0 s colAng1.NW_012115154v1 20260165 37 + 27496150 AGCACACCAAAAGGGAGAC--ACAACAAGCTGAGAAAGA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33714193 37 - 128169293 GGCACACTGAAGAGTGGAC--AGAACAAGCTGGGAAAGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378140 17049475 37 + 19594188 GGCACACCAAAGAGCAGAC--AGAACAAGCTGAGAAAGA i saiBol1.JH378140 C 0 C 0 s cebCap1.NW_016107335v1 4937113 37 - 11686629 GGCACACCAAAGAGTAGAC--AGAACAAGCTGAGAAAGA i cebCap1.NW_016107335v1 C 0 C 0 s aotNan1.NW_018506100v1 3287300 37 - 4527795 GGCACACCAAACAGTAGAC--AGAACAAGCTGAGAAAGA i aotNan1.NW_018506100v1 C 0 C 0 s otoGar3.GL873572 5504399 32 - 12253515 AGCAGATGAAAG-GAAGTC--AGAACAAGCTAAGA---- i otoGar3.GL873572 I 1 C 0 s canFam3.chr16 16071482 34 + 59632846 AGTGAGACAAAGATAAAAG--AGAAC---CTCAGGAAAT i canFam3.chr16 C 0 I 1 s dasNov3.JH575209 1245518 39 + 1922530 AGTAGACAAAAGGGAAGGCAGAGAATAACCTCAGAAAGA i dasNov3.JH575209 I 1 C 0 a score=46335.000000 s hg38.chrUn_KI270746v1 66474 9 + 66486 CACCCAGAA s panTro5.chr7 156370437 9 + 166211670 CACCCAGAA i panTro5.chr7 C 0 C 0 s panPan2.chr7 155983456 9 + 162613886 CACCCAGAA i panPan2.chr7 C 0 C 0 s nomLeu3.chr13 102858266 9 + 110113093 CACCCAGAA i nomLeu3.chr13 C 0 C 0 s macFas5.chr3 184962850 9 + 192294377 AACCCAGAA i macFas5.chr3 C 0 C 0 s colAng1.NW_012115154v1 20260202 9 + 27496150 AACTCAGAA i colAng1.NW_012115154v1 C 0 C 0 s calJac3.chr8 33714230 9 - 128169293 GATCCAGAA i calJac3.chr8 C 0 N 0 s saiBol1.JH378140 17049512 9 + 19594188 CATCCAAAA i saiBol1.JH378140 C 0 N 0 s cebCap1.NW_016107335v1 4937150 9 - 11686629 CATCCAGAA i cebCap1.NW_016107335v1 C 0 N 0 s aotNan1.NW_018506100v1 3287337 9 - 4527795 CATCCAGAA i aotNan1.NW_018506100v1 C 0 N 0 s otoGar3.GL873572 5504431 9 - 12253515 CACCCAGAA i otoGar3.GL873572 C 0 C 0 s canFam3.chr16 16071517 9 + 59632846 AACCCCGAA i canFam3.chr16 I 1 C 0 s dasNov3.JH575209 1245557 9 + 1922530 CCCCCAGAA i dasNov3.JH575209 C 0 N 0 a score=7896.000000 s hg38.chrUn_KI270746v1 66483 3 + 66486 TTC s panTro5.chr7 156370446 3 + 166211670 TTC i panTro5.chr7 C 0 N 0 s panPan2.chr7 155983465 3 + 162613886 TTC i panPan2.chr7 C 0 N 0 s nomLeu3.chr13 102858275 3 + 110113093 TTC i nomLeu3.chr13 C 0 N 0 s macFas5.chr3 184962859 3 + 192294377 TTC i macFas5.chr3 C 0 N 0 s colAng1.NW_012115154v1 20260211 3 + 27496150 TTC i colAng1.NW_012115154v1 C 0 N 0 s otoGar3.GL873572 5504440 3 - 12253515 TTC i otoGar3.GL873572 C 0 N 0 s canFam3.chr16 16071526 3 + 59632846 TTC i canFam3.chr16 C 0 N 0