##maf version=1 scoring=roast.v3.3 a score=4500.000000 s hg38.chrUn_KI270749v1 0 1 + 158759 g s panTro5.chr1 101782033 1 - 228573443 g i panTro5.chr1 N 0 C 0 s panPan2.chr15 44360607 1 + 99763055 g i panPan2.chr15 N 0 C 0 s nomLeu3.chr6 67491161 1 - 121039945 g i nomLeu3.chr6 N 0 C 0 s macFas5.chr7 24002975 1 + 171882078 g i macFas5.chr7 N 0 C 0 s cerAty1.NW_012000887v1 3235908 1 + 7633303 g i cerAty1.NW_012000887v1 N 0 C 0 s chlSab2.chr26 21937391 1 - 58131712 g i chlSab2.chr26 N 0 C 0 s colAng1.NW_012121598v1 2214630 1 + 10629787 g i colAng1.NW_012121598v1 N 0 C 0 s calJac3.chr10 24177447 1 + 132174527 g i calJac3.chr10 N 0 C 0 s saiBol1.JH378136 10562609 1 - 21366645 g i saiBol1.JH378136 N 0 C 0 a score=28653.000000 s hg38.chrUn_KI270749v1 1 6 + 158759 aattcc s panTro5.chr1 101782034 6 - 228573443 aattcc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44360608 6 + 99763055 aattct i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491162 6 - 121039945 aattct i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 24002976 6 + 171882078 aattcc i macFas5.chr7 C 0 C 0 s cerAty1.NW_012000887v1 3235909 6 + 7633303 aattcc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21937392 6 - 58131712 aattcc i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 2214631 6 + 10629787 aattcc i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24177448 6 + 132174527 aattcc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10562610 6 - 21366645 aattcc i saiBol1.JH378136 C 0 C 0 s dasNov3.JH579377 1797301 6 - 2868945 aattcc i dasNov3.JH579377 N 0 C 0 a score=16508.000000 s hg38.chrUn_KI270749v1 7 5 + 158759 aattg s panTro5.chr1 101782040 5 - 228573443 aattt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44360614 5 + 99763055 aattt i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491168 5 - 121039945 aattt i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 24002982 5 + 171882078 cattt i macFas5.chr7 C 0 C 0 s cerAty1.NW_012000887v1 3235915 5 + 7633303 aattt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21937398 5 - 58131712 aattt i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 2214637 4 + 10629787 aa-tt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24177454 5 + 132174527 aattt i calJac3.chr10 C 0 I 1 s saiBol1.JH378136 10562616 5 - 21366645 aattt i saiBol1.JH378136 C 0 I 1 s canFam3.chr30 13395967 5 + 40214260 AATTT i canFam3.chr30 N 0 C 0 s dasNov3.JH579377 1797307 5 - 2868945 aagtc i dasNov3.JH579377 C 0 C 0 a score=62827.000000 s hg38.chrUn_KI270749v1 12 10 + 158759 ttgtctatgc s panTro5.chr1 101782045 10 - 228573443 ttgtctatgc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44360619 10 + 99763055 ttgtctatgc i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491173 10 - 121039945 ttgtctatgc i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 24002987 7 + 171882078 ttgtcta--- i macFas5.chr7 C 0 C 0 s cerAty1.NW_012000887v1 3235920 7 + 7633303 ttgtcta--- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21937403 10 - 58131712 ttgtctatgc i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 2214641 10 + 10629787 ttgtctatgc i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24177460 10 + 132174527 ttgtctatgc i calJac3.chr10 I 1 C 0 s saiBol1.JH378136 10562622 10 - 21366645 ttgtctatgc i saiBol1.JH378136 I 1 C 0 s cebCap1.NW_016107324v1 3719743 10 - 13033340 ttgtctatgc i cebCap1.NW_016107324v1 N 0 C 0 s aotNan1.NW_018501505v1 5209334 10 + 11604778 ttgtctatgc i aotNan1.NW_018501505v1 N 0 C 0 s canFam3.chr30 13395972 10 + 40214260 TTGTCTATGT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1797312 10 - 2868945 ttgtctacac i dasNov3.JH579377 C 0 C 0 a score=1302650.000000 s hg38.chrUn_KI270749v1 22 123 + 158759 aggcctaccagatttctaacatctttgagctaccattttcttcttagctatctgctcagcaaatgtatccaaatgaaaggttgtggagaatgttgaaatcaattcaatgtgtttctcttcttt s panTro5.chr1 101782055 123 - 228573443 aggcctatcagatttctaaaatctctgagctaccattttcttcttagctgtctgctcagcaaacgtatccaaatgaaaggttgtggagaatgttgaaatcacttcaatgtgtttctcttcttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44360629 123 + 99763055 aggcctatcagatttctaaaatctctgagctaccattttcttcttagctatctgctcagcaaatgtatccaaatgaaaggttgtggagaatgttgaaatcacttcaatgtgtttctcttcttt i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491183 123 - 121039945 aggcctatcagatttctaaaatctctgagctaccattttcttcttagctatctgctcagcaagtgcatccaaatgaaaggttgtggagaatgttgaaatcacttcaatgtgtttctcttcttt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23399015 123 + 169600520 aggcctatcagatttctaaaatctctgagctaccattttcttcttagctatctgttcagcaaatgtatccaaatgaaaggttgtggagaatgttgaaatcacttcaatgtgtttctcttcttt i rheMac8.chr7 N 0 I 1 s macFas5.chr7 24002994 123 + 171882078 aggcctatcagatttctaaaatctctgagctaccattttcttcttagctatctgttcagcaaatgtatccaaatgaaaggttgtggagaatgttgaaatcacttcaatgtgtttctcttcttt i macFas5.chr7 C 0 I 1 s macNem1.NW_012010577v1 13248146 123 - 40200012 aggcctatcagatttctaaaatctctgagctaccattttcttcttagctatctgttcagcaaatgtatccaaatgaaaggttgtggagaatgttgaaatcacttcaatgtgtttctcttcttt i macNem1.NW_012010577v1 N 0 I 1 s cerAty1.NW_012000887v1 3235927 123 + 7633303 aggcctatcagatttctaaaatctctgagctaccattttcttcttagctatctgttcagcaaatgtttccaaatgaaaggttgtggagaatgttgaaatcacttcaatgtgtttctcttcttt i cerAty1.NW_012000887v1 C 0 I 8 s chlSab2.chr26 21937413 123 - 58131712 aggcgtatcagatttctaaaatctctgagctaccattttcttcttagctatctgttcagccaatgtatccaaatgaaaggtggtggagaatgttgaaatcacttcaatgtgtttctcttcttt i chlSab2.chr26 C 0 I 1 s manLeu1.NW_012108674v1 30701 123 + 2620224 aggcctatcagatttctaaaatctctgagctaccattttcttcttagctatctgttcagcaaatgtatccaaatgaaaggttgtggagaatgttgaaatcacttcaatgtgtttctcctcttt i manLeu1.NW_012108674v1 N 0 I 1 s colAng1.NW_012121598v1 2214651 123 + 10629787 aggcctatcagatttctaaaatctgtgagctaccattttcttcttagctatctgttcagcaaatgtatccaaatgaaaggttgtggagaatgttgaaatcacttcaacgtgtttctcttcttt i colAng1.NW_012121598v1 C 0 I 1 s calJac3.chr10 24177470 123 + 132174527 agacatacaagaattctaaaatctctgagctaccattttcttcttagctatttgctcagcaaatctatcaaaatgaaaggtggtggagaatgttgaaatcacttcaatgtgtttctcttcctt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10562632 123 - 21366645 agacctacgaaatttctaaaatctctgagctaccattttcttcttagctatttgctcagcaaatgtatcaaaatgaaaggtggtagagaatgttgaaatcacttcaatgtgtttctcttcttt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3719753 123 - 13033340 agacctacgagatttctaaaatctctgagctaccattttcttcttagctatttgctcagcaaatgtatcaaaatgaaaggtggtggagaatgttgaaatcacttcagtgtgtttctcttcttt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5209344 120 + 11604778 agacctaagagatttctaaaatctctgaactaccatt---ttcttagctatttgctcagcaaatgtatcaaaatgaaaggtggtggagaatgttgaaatcacttcaatgtatttctcttcttt i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13395982 119 + 40214260 AGACTTATGAGATTTGCATACCCATTGAG---CCACTTTCTTCTTGACTACCTACtcagcaaatgtatc-aaatgaaaaggagtggagaatgctgaagtcacattaatgtgtttctctcatat i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1797322 122 - 2868945 ggtcctatgagatttccaaaatctttgagctgcccatttcttcttggctctctgctcataaaatatattaaaaggaaaagtggtagagaatgttggaatcaccccaatgtgtttctcttctt- i dasNov3.JH579377 C 0 C 0 a score=2849.000000 s hg38.chrUn_KI270749v1 145 12 + 158759 atgagagcttac- s panTro5.chr1 101782178 12 - 228573443 ctgggaggttat- i panTro5.chr1 C 0 C 0 s panPan2.chr15 44360752 12 + 99763055 ctgggagcttag- i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491306 12 - 121039945 ctgggagcttag- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23399139 7 + 169600520 ----gagacag-- i rheMac8.chr7 I 1 C 0 s macFas5.chr7 24003118 7 + 171882078 ----gagacag-- i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 13248270 7 - 40200012 ----gagagag-- i macNem1.NW_012010577v1 I 1 C 0 s chlSab2.chr26 21937537 7 - 58131712 ----gagacag-- i chlSab2.chr26 I 1 C 0 s manLeu1.NW_012108674v1 30825 7 + 2620224 ----gagacag-- i manLeu1.NW_012108674v1 I 1 C 0 s colAng1.NW_012121598v1 2214775 7 + 10629787 ----gagacag-- i colAng1.NW_012121598v1 I 1 C 0 s calJac3.chr10 24177593 11 + 132174527 ctgggagctta-- i calJac3.chr10 C 0 I 1 s saiBol1.JH378136 10562755 11 - 21366645 ctgggagctta-- i saiBol1.JH378136 C 0 I 1 s cebCap1.NW_016107324v1 3719876 11 - 13033340 ctgggagcttt-- i cebCap1.NW_016107324v1 C 0 I 1 s aotNan1.NW_018501505v1 5209464 11 + 11604778 ctgggagctta-- i aotNan1.NW_018501505v1 C 0 I 1 s canFam3.chr30 13396101 11 + 40214260 ctgggagcttg-- i canFam3.chr30 C 0 I 1 s dasNov3.JH579377 1797444 10 - 2868945 --gcaagagtg-g i dasNov3.JH579377 C 0 C 0 e cerAty1.NW_012000887v1 3236050 8 + 7633303 I a score=2509813.000000 s hg38.chrUn_KI270749v1 157 226 + 158759 acactcaagttctggatactttgattgctatcagaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaagtgggatggcctaatacaaattaatttttcatagctagaaTTAAAAGAGGAAAACTTTAAATAGCATTGAGTTATCAGTACTTTCATATCTTGATACATTTCTTCCTGAAAATGTTCATGCCTGCTGA s panTro5.chr1 101782190 224 - 228573443 acactcaagttctggatgctttgattgttatcagaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcctgatacaaattaacttgtcatagctagaattagaagAGGAAAACT--AAATAGCATTGAGTTATCAGTACTTTCATGTCTTGATACATTTCTTCTTGAAAATGTTCATGCTTGCTGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44360764 226 + 99763055 acactcaagttctggatgctttgattgctatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggacggcttgatacaaattaacttgtcatagctagaattagaagtGGAAAACTTTAAATAGCATTGAGTTATCCGTACTTTCATGTCTTGATACATTTCTTCTTGAAAATGTTCATGCCTGCTGA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491318 226 - 121039945 acgctcaagttctggatgctttgattgctatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcttgatacaaattaacttgtcatagctagaattagaaGTGGAAAACTTTAAATAGCATTGAGTTATCAGTACTTTCATGTCTTGATACATTTCTTCTTGAAAATGTTCATGCCTACTGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23399146 226 + 169600520 acagtcaagttctggatgctttgattgctatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcttgatacaaattaacttgtcatagctagaattagaagtGGAAAACTTTAAATAGCATTGAGTTATCAGTACTTTCATGTCTTGATACATTTCTTCTTGAAAATGTTCATGCCTGCTGA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24003125 226 + 171882078 acagtcaagttctggatgctttgattgccatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatagcttgatacaaattaacttgtcatagctagaattagaaGTGGAAAACTTTAAATAGCATTGAGTTATCAGTACTTTCATGTCTTGATACATTTCTTCTTGAAAATGTTCATGCCTGCTGA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13248277 226 - 40200012 acagtcaagttctggatgctttgattgctatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcttgatacaaattaacttgtcatagctagaattagaaGTGGAAAACTTTAAATAGCATTGAGTTATCAGTACTTTCATGTCTTGATACATTTCTTCTTGAAAATGTTCATGCCTGCTGA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3236058 226 + 7633303 acagtcaagttctggatgctttgattgctatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcttgatacaaattaacttgtcatagctagaattagaaGTGGAAAACTTTAAATAGCATTGAGTTATCAGTACTTTCATGTCTTGATACATTTCTTCTTGAAAATGTTCATGCCTGCTGA i cerAty1.NW_012000887v1 I 8 C 0 s chlSab2.chr26 21937544 221 - 58131712 acagtcaagttctggatgctttgattgctatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcttgatacaaattaacttgtcatagctagaattagaaGTGGAAAACTTTAAATAGCA-----TTATCAGTACTTTCATGTCTTGATACATTTCTTCGTGAAAATGTTCATGCCTGCTGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 30832 226 + 2620224 acagtcaagttctggatgctttgattgctatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcttgatacaaattaacttgtcatagctagaattagaaGTGGAAAACTTTAAATAGCATTGAGTTATCAGTACTTTCATGTCTTGATACATTTCTTCTTGAAAATGTTCATGCCTGCTGA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2214782 226 + 10629787 acagtcaagttctggatgctttgattgctatcggaagtccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcttgatacaaattaacttgtcatagctagaattagaaGTGGAAAACTTTAAATAGCATTGAGTTATCAGTACTTTCATGTCTTGATACATTTCTTCTTGAAAATGTTCATGCCTGCTGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24177605 225 + 132174527 actctcaggttctggatgctttgattgctatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcttgatacaaattaacttgtcatagctagaattagaaGTGG-AAACTTTAAATAGCACTGAGTTATCAGTACTTTCATGTCTTGATACATTTATTCTTGAAAATGTTCATGCCTGCTGA i calJac3.chr10 I 1 C 0 s saiBol1.JH378136 10562767 226 - 21366645 agtctcaagttctggatgctttgattgctatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcttgatacaaattaacttgtcatagctagaattagaaGTGGAAAACTTTAAATAGCACTGAGTTATCATTACTTTCATGTCTTGATACATTTCTTCTTGAAAATGTTCATGCCTGCTGA i saiBol1.JH378136 I 1 C 0 s cebCap1.NW_016107324v1 3719888 226 - 13033340 actctcaagttctggatgctttgattgctatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcttgatacaaattaacttgtcatagctagaattagaaGTGGAAAACTTTAAATAGCACTGAGTTATCAGTACTTTCATGTCTTGATACATTTCTTCTTGAAAATGTTCATGCCTGCTGA i cebCap1.NW_016107324v1 I 1 C 0 s aotNan1.NW_018501505v1 5209476 226 + 11604778 actctcaagttctggatgctttgattgctatcggaagcccttaaatagctacttatttttaattaattttatccagctttcataattgttcttgccaggtgggatggcttgatacaaattaacttgtcatagctagaattagaaATGGAAAACTTTAAATAGCACTGAGTTATCAGTACTTTCATGTCTTGATACATTTCTTCTTGAACATGTTCATGCCTGCTGA i aotNan1.NW_018501505v1 I 1 C 0 s canFam3.chr30 13396113 225 + 40214260 atattca-gttccgaatactttaattggtatctgatgtctttaaatagctatttatttttaattaattttatccatatttcataattgttcttgccaagtggaatggcttgatacaaattattttgatatagctggaattagaaGTGGAACACTTTAGGTAGCATTGAGTTATTAGTACTTTCATGTCGTAATATATTTCTACCTAAAAATAGCCATGTGTGCTGC i canFam3.chr30 I 1 C 0 s dasNov3.JH579377 1797454 220 - 2868945 actctcaagtgctgcatgatttgactaatgtttgatgccatcaaatagctgttcagttttatttaattttatctagcattcataattgttcttgtcaggtggaatggcttcatacaaattatcttgtcataactgg------aagtgcaaAATGATAAATAGCAGTGAGTTATCGATACTTTCATGTCATGATAGATTTCTATAAGAAAATATCAAAACAAGCTAA i dasNov3.JH579377 C 0 C 0 a score=21840.000000 s hg38.chrUn_KI270749v1 383 2 + 158759 TT s panTro5.chr1 101782414 2 - 228573443 TT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44360990 2 + 99763055 TT i panPan2.chr15 C 0 C 0 s rheMac8.chr7 23399372 2 + 169600520 TT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24003351 2 + 171882078 TT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13248503 2 - 40200012 TT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3236284 2 + 7633303 TT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21937765 2 - 58131712 TT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 31058 2 + 2620224 TT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2215008 2 + 10629787 TT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24177830 2 + 132174527 TT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10562993 2 - 21366645 TT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3720114 2 - 13033340 TT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5209702 2 + 11604778 TT i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13396338 2 + 40214260 TT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1797674 2 - 2868945 TT i dasNov3.JH579377 C 0 C 0 e nomLeu3.chr6 67491544 0 - 121039945 C a score=65.000000 s hg38.chrUn_KI270749v1 385 2 + 158759 -TG s calJac3.chr10 24177832 2 + 132174527 -TG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10562995 2 - 21366645 -TG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3720116 2 - 13033340 -TG i cebCap1.NW_016107324v1 C 0 C 0 s canFam3.chr30 13396340 2 + 40214260 -TG i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1797676 2 - 2868945 TT- i dasNov3.JH579377 C 0 C 0 e manLeu1.NW_012108674v1 31060 0 + 2620224 C e macNem1.NW_012010577v1 13248505 0 - 40200012 C e rheMac8.chr7 23399374 0 + 169600520 C e aotNan1.NW_018501505v1 5209704 0 + 11604778 C e colAng1.NW_012121598v1 2215010 0 + 10629787 C e chlSab2.chr26 21937767 0 - 58131712 C e cerAty1.NW_012000887v1 3236286 0 + 7633303 C e macFas5.chr7 24003353 0 + 171882078 C e nomLeu3.chr6 67491544 0 - 121039945 C e panPan2.chr15 44360992 0 + 99763055 C e panTro5.chr1 101782416 0 - 228573443 C a score=546.000000 s hg38.chrUn_KI270749v1 387 1 + 158759 T s cebCap1.NW_016107324v1 3720118 1 - 13033340 T i cebCap1.NW_016107324v1 C 0 I 5 s canFam3.chr30 13396342 1 + 40214260 T i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1797678 1 - 2868945 T i dasNov3.JH579377 C 0 C 0 e manLeu1.NW_012108674v1 31060 0 + 2620224 C e macNem1.NW_012010577v1 13248505 0 - 40200012 C e rheMac8.chr7 23399374 0 + 169600520 C e aotNan1.NW_018501505v1 5209704 0 + 11604778 C e saiBol1.JH378136 10562997 0 - 21366645 C e calJac3.chr10 24177834 0 + 132174527 C e colAng1.NW_012121598v1 2215010 0 + 10629787 C e chlSab2.chr26 21937767 0 - 58131712 C e cerAty1.NW_012000887v1 3236286 0 + 7633303 C e macFas5.chr7 24003353 0 + 171882078 C e nomLeu3.chr6 67491544 0 - 121039945 C e panPan2.chr15 44360992 0 + 99763055 C e panTro5.chr1 101782416 0 - 228573443 C a score=165.000000 s hg38.chrUn_KI270749v1 388 9 + 158759 CTGTTTTTT s canFam3.chr30 13396343 9 + 40214260 TTGGCTTTA i canFam3.chr30 C 0 I 205 e manLeu1.NW_012108674v1 31060 0 + 2620224 C e macNem1.NW_012010577v1 13248505 0 - 40200012 C e rheMac8.chr7 23399374 0 + 169600520 C e aotNan1.NW_018501505v1 5209704 0 + 11604778 C e cebCap1.NW_016107324v1 3720119 5 - 13033340 I e dasNov3.JH579377 1797679 0 - 2868945 C e saiBol1.JH378136 10562997 0 - 21366645 C e calJac3.chr10 24177834 0 + 132174527 C e colAng1.NW_012121598v1 2215010 0 + 10629787 C e chlSab2.chr26 21937767 0 - 58131712 C e cerAty1.NW_012000887v1 3236286 0 + 7633303 C e macFas5.chr7 24003353 0 + 171882078 C e nomLeu3.chr6 67491544 0 - 121039945 C e panPan2.chr15 44360992 0 + 99763055 C e panTro5.chr1 101782416 0 - 228573443 C a score=0.000000 s hg38.chrUn_KI270749v1 397 834 + 158759 TTTTTTTTTCTGACAAACTCATCTTTTATTTTTGATGTGTGTGTGTGTTTTTTTTTAACAGGGATTTGGGGAATTATTTGAGAAAACAAAACAATAACAACAGAAAAACTTCTAATGGTGATGATAGCCTCTTCTTCAGTAATTTCTCACTTCTTGGTACTCCTGTCCTGAAAGATATTTCAAGATAGAAAGAGGACAGTTGTTGGCTGTTGCTGGATCCACTGGAGCAGGCAAGGTAGTCTCTTTTATTCTTCACTATTAAGAACTTAATTTGGTATCCATGTCTCTTTTGTCTTCTAGTTTGTAGTGCTGGAAGGTATTTTTGGAGAAATTCTTACATGAGCATTAGGAGAATGTTTGGGTGTAGTGTCTTGTGTAATAGAAATTATTCCACTGATAATTTACTCTAGTTTTTTATTTCCTCATATTATTTTCAGTggctttttcttccacatctttatatctcgcaccacattcaacactgtatcttgcacacggcgagcattcaataactttattgaataaataaatCATCCATTTTACCCAGTCTTAACCAGAACAGACATTTTTTCAGAGCTGGTCGAGGAAAATCATGACTTACATTTGACCTTAATAACCACATAAGCAAATGGTCCCCATTTTTTTTATTTAAAAGTTTTTATTTATTTAtttatttattattattatactttaagttttagggaacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgccggtgcactTTctgttgtggggtgggggtaggtgggaaggatagcattgggagatatacctaatgccagatgacgagttgg e manLeu1.NW_012108674v1 31060 0 + 2620224 C e macNem1.NW_012010577v1 13248505 0 - 40200012 C e rheMac8.chr7 23399374 0 + 169600520 C e aotNan1.NW_018501505v1 5209704 0 + 11604778 C e cebCap1.NW_016107324v1 3720119 5 - 13033340 I e canFam3.chr30 13396352 205 + 40214260 I e dasNov3.JH579377 1797679 0 - 2868945 C e saiBol1.JH378136 10562997 0 - 21366645 C e calJac3.chr10 24177834 0 + 132174527 C e colAng1.NW_012121598v1 2215010 0 + 10629787 C e chlSab2.chr26 21937767 0 - 58131712 C e cerAty1.NW_012000887v1 3236286 0 + 7633303 C e macFas5.chr7 24003353 0 + 171882078 C e nomLeu3.chr6 67491544 0 - 121039945 C e panPan2.chr15 44360992 0 + 99763055 C e panTro5.chr1 101782416 0 - 228573443 C a score=21165.000000 s hg38.chrUn_KI270749v1 1231 4 + 158759 --tgTC s panTro5.chr1 101782416 4 - 228573443 --TGTC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44360992 4 + 99763055 --TGTC i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491544 4 - 121039945 --TTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23399374 4 + 169600520 --TGTC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24003353 4 + 171882078 --TGTC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13248505 4 - 40200012 --TGTC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3236286 4 + 7633303 --TGTC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21937767 4 - 58131712 --TGTC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 31060 4 + 2620224 --TGTC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2215010 4 + 10629787 --TGTC i colAng1.NW_012121598v1 C 0 C 0 s aotNan1.NW_018501505v1 5209704 4 + 11604778 --TGTC i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13396557 4 + 40214260 --TGTC i canFam3.chr30 I 205 C 0 s dasNov3.JH579377 1797679 4 - 2868945 TATG-- i dasNov3.JH579377 C 0 C 0 e cebCap1.NW_016107324v1 3720119 5 - 13033340 I e saiBol1.JH378136 10562997 0 - 21366645 C e calJac3.chr10 24177834 0 + 132174527 C a score=58860.000000 s hg38.chrUn_KI270749v1 1235 6 + 158759 TGTTTA s panTro5.chr1 101782420 6 - 228573443 TGTTTG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44360996 6 + 99763055 TGTTTG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491548 6 - 121039945 TGTCTG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23399378 6 + 169600520 TGTTTG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24003357 6 + 171882078 TGTTTG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13248509 6 - 40200012 TGTTTG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3236290 6 + 7633303 TGTTTG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21937771 6 - 58131712 TGTTTG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 31064 6 + 2620224 TGTTTG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2215014 6 + 10629787 TGTTTG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24177834 6 + 132174527 TGTTTG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10562997 6 - 21366645 TGTTTG i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 5209708 6 + 11604778 TGTTTG i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13396561 5 + 40214260 -TTTTG i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1797683 6 - 2868945 TGTTTG i dasNov3.JH579377 C 0 C 0 e cebCap1.NW_016107324v1 3720119 5 - 13033340 I a score=1291551.000000 s hg38.chrUn_KI270749v1 1241 130 + 158759 TTGAGAGGAGAATGTTCAGAATTTTATAT--CTTCAACATCTTTTTCTGCATTAA-TAAGATACTGAGATCTTATAACTCTT---GTCATTTTGGTCACTTATATTTTCATATGG-AAAAAATCATATAATCCAGGG s panTro5.chr1 101782426 130 - 228573443 TTGAGAGAAGAATGTTCAGAATTTTATAT--CCTCAACATCTTTTTCTGCATTAA-TAAGATACTGAGATTTTATAACTCTT---GTCATTTTGGTCACTTACATTTTCATATGG-AAAAAATCATATAATCCAAGG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44361002 133 + 99763055 TTGAGAGGAGAATGTTCAGAATTTTATAT--CTTGAACATCTTTTTCTGCATTAA-TAAGATACTGAGATTTTATAACTCTTGTAGTCATTTTGGTCACTTATATTTTCATATGG-AAAAAATCATATAATCCAGGG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491554 133 - 121039945 TTGAGAGGAGAATGTTCAGAATTTTATAT--CTTCAACTTCTTTTTCTGCATTAA-TAAGATACTGAGATTTTATAACTCTTGTAGTCATTTTGGTCACTTATATTTTCATATGG-AAAAAATAATATAATCCAGGG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23399384 134 + 169600520 TTGAGAGGAGAATGTTCAGAATTTTATAT--CTTCAACATCTTTTTCTGCATTAA-TAAGATACTGAGATTTTATAACTCTTGTAGTCATTTTGGTCACTTATATTTTCATACGGAAAAAAATCATATAATCCAGGG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24003363 134 + 171882078 TTGAGAGGAGAATGTTCAGAATTTTATAT--CTTCAACATCTTTTTCTGCATTAA-TAAGACACTGAGATTTTATAACTCTTGTAGTCATTTTGGTCACTTATATTTTCATACGGAAAAAAATCATATAATCCAGGG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13248515 132 - 40200012 TTGAGAGGAGAATGTTCAGAATTTTATAT--CTTCAGCATCTTTTTCTGCATTAA-TAAGATAATGAGATTTTATAACTCTTGTAGTCATTTTGGTCACTTATATTTTCATATGG--AAAAATCATATAATCCAGGG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3236296 133 + 7633303 TTGAGAGGAGAATGTTCAGAATTTTATAT--CTTCAACATCTTTTTCTGCATTAA-TAAGATACTGAGATTTTATAACTCTTGTAGTCATTTTGGTCACTTATATTTTCATATGG-AAAAAATCATATAATCCAGGG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21937777 133 - 58131712 TTGAGAGGAGAATGTTCAGAATTTCATAT--CTTCAACATCTTTTTCTGCATTAA-TAAGATACTGAGATTTTAGAACTCTTGTAGTCATTTTGGTCACTTATATTTTCATATGG-AAAAAATCATATAATCCAGGG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 31070 133 + 2620224 TTGAGAGGAGAATGTTCAGAATTTTATAT--CTTCAACATCTTTTTCTGCATTAA-TAAGATACTGAGATTTTATAACTCTTGTAGTCATTTTGGTCACTTATATTTTCATATGG-AAAAAATCATATAATCCAGGG i manLeu1.NW_012108674v1 C 0 I 1663 s colAng1.NW_012121598v1 2215020 134 + 10629787 TTGAGAGGAGAATGTTCAGAATTTTATAT--CTTCAACATCTTTTTCTGCATTAA-TAAGATACTGAGATTTTATAACTCTTGTAGTCATTTTGGTCACTTATATTTTCATATGGAAAAAAATCATATAATCCAAGG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24177840 133 + 132174527 TTGAGAGGAGAATGCTCAGAATTTTATAC--CTACAACATCTATTTCTGCATTAA-TAAGATATTGAGATTTTATAAATCTTGTAGTCATTTTGGTCACTTATATTTTCATATGA-AAAAAATTGTATAATGCAGGG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10563003 133 - 21366645 TTGAGAGGAGAATGCTCAGAATTTTATAC--CTACAACATCTATTTCTGCATTAA-TAAGATATTGAGATTTTATAAATCTTGTAGTCATTTTGGTCACTTATATTTTCAAATGA-AAAAAATCATATAATGCAGGG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3720124 134 - 13033340 TTGAGAGGAGAATGCTCAGAATTTTATAC--CTACAACATCTATTTCTGCATTAATTAAGATATTGAGATTTTATAAATCTTGTCGTCATTTTGGTCACTTATATTTTCATGTGA-AAAAAATCATATAATGCAGGG i cebCap1.NW_016107324v1 I 5 C 0 s aotNan1.NW_018501505v1 5209714 133 + 11604778 TTGAGAGGAGAATGCTCAGAATTTTATTC--CTACAACATCTATTTCTGCATTAA-TAAGATATTGAAATTTTATAAATCTTGTAGTCATTTTGGTCACTTATATTTTCATATTA-AAAAAATCATATAATGCAGAG i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13396566 131 + 40214260 TTGAGAGAAAAATATACATACTTTTATAT--CTCTCACATCTTTTTCTTTATTAA-TAAGATATTG--ATTTTCTAACCCTTTTGGAAATGTCGGTCATTTAGGTTTTCCTAAGA-AAAAAATCATATTATCCAGGG i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1797689 114 - 2868945 TTGAGAAGAGAATGTTAATGCTTTTATATAACTTCCACACC---TTCTGTATTGA-TATG-----TAGATTTTCTAACCCTTTCAGT----------ATTTATATTTTCCATGGG-AAAAAATCATATCA--CAGG- i dasNov3.JH579377 C 0 C 0 a score=77767.000000 s hg38.chrUn_KI270749v1 1371 9 + 158759 TTTCCAATA s panTro5.chr1 101782556 9 - 228573443 TTTCCAATA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44361135 9 + 99763055 TTTCCAATA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491687 9 - 121039945 TTTCCAATA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23399518 9 + 169600520 TTTCGAATA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24003497 9 + 171882078 TTTCGAATA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13248647 9 - 40200012 TTTCGAATA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3236429 9 + 7633303 TTTCCAATA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21937910 9 - 58131712 TTTGCAATA i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 2215154 9 + 10629787 TTTCCAATA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24177973 9 + 132174527 TTTCCAATA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10563136 9 - 21366645 TTTCCAATA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3720258 9 - 13033340 TTTCCAATA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5209847 9 + 11604778 TTTCCAGTA i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13396697 9 + 40214260 CTTTCAATA i canFam3.chr30 C 0 I 543 s dasNov3.JH579377 1797803 9 - 2868945 TTTCCTATG i dasNov3.JH579377 C 0 C 0 e manLeu1.NW_012108674v1 31203 1663 + 2620224 I a score=1041175.000000 s hg38.chrUn_KI270749v1 1380 132 + 158759 TATTTGTGTAAAATTAAGAAAATGATCTTATCTAATTA-----CTTGATCAATATCTGTGATTATATTTTCATTGCC--TTCCAATTTGAATATTTGTTCTCTATTCCTTCTTAATCTGGATTGAGGTTCTGATTAATT s panTro5.chr1 101782565 128 - 228573443 TATTTGTGTAAAATTAAGAAAATGATCTTATCTAATTA-----CTTGATCAATATCTGTGATTATATTTTCATTGCC--TTCCAATTTTAACATTTGTTCTCTATTCCTTCTTAATCTGGATTGAGGTTCT----AATT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44361144 127 + 99763055 TATTTGTGTAAAATTAAGAAAATGATCTT-----ATTA-----CCTGATCAATATCTGTGATTATATTTTCATTGCC--TTCCAATTTTAGTATTTGTTCTCTATTCCTTCTTTATCTGGATTAAGGTTCTGATTAATT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491696 129 - 121039945 TATTTGTGTAAAATTAAGAAAATGATCTTATCTAATTA-----CTTGATCAATATCTGTG---ATATTTTCATTGCC--TTCCAATTTTAATATTTGTTCTCTATTCCTTCTTTATCTGGATTGAGGTTCTGATTAGTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23399527 132 + 169600520 TATTTGTGTAAAATTAGGAAAATGATCTTATCTGATTA-----TTTGATCAATATCTGTGATTATATTTTCATTGCC--TTCCAATTTCAATATTTGTTCTCTATTCCTTCTTTATCTGGATTGAGGTTCTGATTAATT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24003506 132 + 171882078 TATTTGTGTAAAATTAGGAAAATGATCTTATCTGATTA-----TTTGATCAATATCTGTGATTATATTTTCATTGCC--TTCCAATTTCAATATTTGTTCTCTATTCCTTCTTTATCTGGATTGAGGTTCTGATTAATT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13248656 132 - 40200012 TATTTGTGTAAAATTAGGAAAATGATCTTATCTGATTA-----TTTGATCAATATCTGTGATTATATTTTCATTGCC--TTCCAATTTCAATATTTGTTCTCTATTCCTTCTTTATCTGGAGTGAGGTTCTGATTAATT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3236438 132 + 7633303 TATTTGTGTAAAATTAGGAAAATGATCTTATCTGATTA-----TTTGATCAATATCTGTGATTATATTTTCATTGCC--TTCCAATTTCAATATTTGTTCTCTATTCCTTCTTTATCTGGATTGAGGTTCTGATTAATT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21937919 132 - 58131712 TATTTGTGTAAAATTAGGAAAATGATCTTATCTGATTA-----CTTGATCAATATCTGTGATTATATTTTCATTGCC--TTCCAATTTCAATATTTGTTCTCTATTCCTTCTTTATCTGAATTGAAGTTCTGATTAATT i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 2215163 132 + 10629787 TATTTGTGTAAAATTAGGAAAATGATCTTATCTGATTA-----CTTGATCAGTATCTGTGATTATATTTTCATTGCC--TTCCAATTTCAATATTTGTTCTCTATTCCTTCTTTATCTTAATCGAGGTTCTGATTAATT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24177982 137 + 132174527 TATTTCCATAAGATTAAGAAAATGATCTTACCTAATTACTTAGCTTGACCAATATCTATGATTATATTTTCATTGCC--TTCCAAATTTAATATTACCTCTCTATTCCTTCTTTATCTGGCTTGATGTTCTAATTAATT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10563145 137 - 21366645 TATTTGCATACAATTAAGAAAATGATCTTATCTAATTACTTAGCTTGATCAATATCTGTGATTATATTTTCACTGCC--TTCCAAATTTAATATTACCTCTCTGTTCCTTCTTTATCTGGATTGAGGTTCTGATTAATT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3720267 137 - 13033340 TATTTGCATAAAATTAAGAAAATTATCTTATCTAATTACTTAGCTTGATCGATATCTGTGATTATATTTTCATTGCC--TTCCAAATTTAATATTACCTCTCTATTCCTTCTTTATCTGGACTGAGGTTCTGATTAATT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5209856 137 + 11604778 TATCTGTATAAAATTAAGAAAATGATCTTATCTAATTACTTAGCTTGATCAATATCTGTGATTATATTTTCATTGCA--TTCCAAATTTAATATTACCTCTCTATTACTTCTTTATCTGGATTGAGGTTCTGATTAATT i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13397249 111 + 40214260 TATTTGCA-AAAGTTAATAAAGTAGTCTTGTATAATTATTTAATTTGATTAATTTCTATG---------------------------TTAATATTACGGATTTGTTTCTAATTTGTCTAGATTGAAACTTCTGTGAAAT i canFam3.chr30 I 543 C 0 s dasNov3.JH579377 1797812 138 - 2868945 TATTTGCATAAAGTTAAGAAAATGGCTTTAT-TCATTATTCAATTTGATCAATATCTATGGTCATATTTCTATTTTCATGTTTAATTTTAATTTGGAGTCTTAACTCCTCATTTACCTGTATTGAGAATCTGGTGAATT i dasNov3.JH579377 C 0 C 0 e manLeu1.NW_012108674v1 31203 1663 + 2620224 I a score=1949098.000000 s hg38.chrUn_KI270749v1 1512 263 + 158759 ATTTTAATGTTGCAAATTGTTTTCACGTTTTCCATAAAATGAGTTCTTGAGTTTATTTCTTTACTGCATCATTCTATTTTCAAGTCATGA--ACTTCTGCCTCAATTAAAAAAAAAA-----CTCACCATTTCTATGAAATTGTTGTGTTCatatttta---ttttttatttactgtataattcagt---atagaatatataatat--------------------------------------------------tataa-aatatg---ta----------------------------ataa---------------aaggat----------------------aaaaaat-----------------aagatacaaA-----AAGTAAGG--GGTGTGAGTTTTGAAAATTATA s panTro5.chr1 101782693 261 - 228573443 ATTTTAATGTTGCAAATTGTTTTCAGTTTTTCCATAAAATGAGTTCTTGAGTTTATTTCTTTACTGCATCATTCTATTTTCAAGTCATGA--ATTTCTGCTTCAATTAAAAAAAAC------CTCACCATTTCTATGAAATTTTTGTGTTCATATTTGA---TTTTTTATTTACTGTATAATTCAGT---ATGGA-TATATAATAT--------------------------------------------------TATAA-AATATG---TA----------------------------ATAG---------------TAGGAT----------------------AAAAAAT-----------------AAGACACAGA-----AAGTAAGG--GGTGTGAGTTTGGAAAATTATA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44361271 268 + 99763055 ATTTTAATGTTGCAAATTGTTTTCACTTTTTCCATAAAGTGAGTTCTTGAGTTTATTTCTTTACTGCATTATTCTATTTTCAAGTCATGA--ACTTCTGCTTCAATTAAAAAAAAAA----CCTCACCATTTCTATGAAATTGTTTTGTTCATATTTTA--TTTTTTtatttactgtataattcagt---atggaatatataatat--------------------------------------------------tataa-aatatgtaata----------------------------ataa---------------taggat----------------------aaaaaat-----------------aagatataaa-----aggtaaGG--GGTGTCAGTTTAGAAAATTATA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67491825 262 - 121039945 ATTTTAATGTCGCAAATTGTTTTCACTTTTTCCATAAAGTGAGTTCTTGAGTTTATTTCTTTACTGCATCATTCTATTTTCAAGTCATAA--ACTTCTGCTTCAATTAAAAAAAAAA---ACCTCACCATTTCTATGAAATTGTTTTGTTCAT---------TTTTTTATTTACTGTATAATTCAGT---ATGGAATATATAATAT--------------------------------------------------TATAA-AATATATAATA----------------------------ATAA---------------TAGGAT----------------------AAAAAAT-----------------AAGATATAAA-----AAGCAAGG--GGTGTCAATTTAGAAAATTATA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23399659 277 + 169600520 ATTTTTATGTTGCAAATTGCTTTCACTTTTTCCACAAAATGAGTTCTTGAGTTTATTTCTTTACTGCATCATTCTATTTTCAAGTCATGA--ACTTCTGCTTCAATTAAAAAAGAAAAAAACCTCACCATTTCTGTGAAATTGTTTTGTTCACATTTTA--TTTTTTTATTTACTGTATAATTCAGT---GTGGaatatataatat--------------------------------------------------tataa-aatacgtaata----------------------------ataa---------------taGGGT----------------------AAAAAATACA------------AAAAGATACAAA-----AAGTAAGG--GGTGTCAATTTAGAAGATTACA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24003638 277 + 171882078 ATTTTTATGTTGCAAATTGCTTTCACTTTTTCCACAAAATGAGTTCTTGAGTTTATTTCTTTACTGCATCATTCTATTTTCAAGTCATGA--ACTTCTGCTTCAATTAAAAAAGAAAAAAACCTCACCATTTCTGTGAAATTGTTTTGTTCACATTTTA--TTTTTTTATTTACTGTATAATTCAGT---GTGGaatatataatat--------------------------------------------------tataa-aatacgtaata----------------------------ataa---------------taGGGT----------------------AAAAAATACA------------AAAAGATACAAA-----AAGTAAGG--GGTGTCAATTTAGAAGATTACA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13248788 277 - 40200012 ATTTTTATGTTGCAAATTGTTTTCACTTTTTCCACAAAATGAGTTATTGAGTTTATTTCTTTACTGCATCATTCTATTTTCAAGTCATGA--ACTTCTGCTTCAATTAAAAAAGAAAAAAACCTCACCATTTCTGTGAAATTGTTTTGTTCACATTTTA--TTTTTTTATTTACTGTATAATTCAGT---GTGGaatatataatat--------------------------------------------------tataa-aatatgtaata----------------------------ataa---------------taGGGT----------------------AAAAAATACA------------AAAAGATGCAAA-----AAGTAAGG--GGTGTCAATTTAGAAGATTACA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3236570 277 + 7633303 ATTTTTATGTTGCAAATTGTTTTCACTTTTTCCACAAAATGAGTTCTTGAGTTTATTTCTTTACTGCATCATTCTATTTTCAAGTCATGA--ACTTCTGCTTCAATTAAAAAAGAAAAAAACCTCACCATTTCTGTGAAATTGTTTTGTTCACATTTTA--TTTTTTCATTTACTGTATAATTCAGT---GTGGaatatataatat--------------------------------------------------tataa-aatacgtaata----------------------------ataa---------------taGGGT----------------------AAAAAATACA------------AAAAGATACAAA-----AAGTAAGG--GGTGTCAATTTAGAAGATTACA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21938051 277 - 58131712 ATTTTAATGTTGCAAATTGTTTTCACTTTTTCTATAAAATGAGTTCTTGAGTTTATTTCTTTACTGCATCATTCTATTTTCAAGTCATGA--ACTTCTGCTTCAATTAAAAAAGAAAAAAACCTCACCATTTCTATGAAATTGTTTTGTTCACATTTTA--TTTTTTTATTTACTGTATAATTCAGT---GTGGaatatataatat--------------------------------------------------tataa-aatacgtaata----------------------------ataa---------------taGGGT----------------------AAAAAATACA------------AAAAGATACAAA-----AAGTAAGG--GGTGTCAATTTAGAAGATTACA i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 2215295 276 + 10629787 ATTTTAATGTTGCAAATTGTTTTCACTTTTTCCATAAAATGAGTTCTTGAGTTTATTTCTTTACTGCATCATTCTATTTTCAAGTCATGA--ACTTCTGCTTCAATTAAAAAAGAAAAAAACCTCACCATTTCTATGAAATTGTTTTGTTCACATTTTA--TTTTTTTATTTACTGTATAATTCAGt---atggaatatgtaatat--------------------------------------------------tataa-aatacgtaata----------------------------ataa---------------taGGAT-----------------------AAAAATACA------------AAAAGATACAAA-----AAGTAAGG--GATGTCAATTTAGAAGATTACA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24178119 268 + 132174527 ATTGTAATGTTGTAAATTGTTTTCACTTTCCCTGTAGAATGAGTTCTTGAGTTTATTTCTTTACTCCATCTTTCTATCCTCAAGTCAGGA--ACTTCTGCTTCAATTTAAAAGAAAA--------CTCATTTCTATGAAATTGTTTTGTTAATATTTTG--TTTTTTAATTTACTGTATAATTCAGT---ATGTAATATATAA-----------------------------------------------------TATAA-AATAAGTAGTA----------------------------ATAAATGCTT-------AATAGGAT-----------------------AAAAAT----------------CAAGATATAAA-----AA-TAAAG--AGTGTCAGTTTAGAAAATTATA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10563282 274 - 21366645 ATTGTAATGTTGTAAATTATTTTCACTTTCCCTGTAGAATGAGTTCTTGAGTTTATTTATTTACTCCATCATTCTATCTTCAAGTCAGGA--ACTTCTGCTTCAATTAAAAAAAAAAAAA----CCTCATTTCTATAAAGTTGTTTTGTTAATATTTTG--TTTTTTAATTTACTGTATCATTCAGT---ATGTAATACATAA-----------------------------------------------------TATAA-AATAAGTAGTA----------------------------ATGAAGGCTT-------AATAGGAT----------------------AAAAAAT----------------CAAGATATAAA-----AAGTAAAG--GGTGTCAGTTTAGAAAATTATA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3720404 266 - 13033340 ATTGTAATGCTGTAAATTATTTTCACTTTCCCTGTAGAATGAGTTCTTGAGTTTATTTATTTACTCCATCATTCTATCTTC--GTCAGGA--ACTTCTGCTTCAATTAAAAAAAAAAA-------CTCATTTCTATGAAGTTGTTTTGTTAATATTTTG--TTTTTTAatttactgtataattcagt---atgtaatatataa-----------------------------------------------------tataa-aataAGTAGTA----------------------------ATGAAGGCT----------TAGGAT----------------------AAAAAAT----------------CAAGATATAAA-----AAGTTAAG--GGTTTCAGTTTAGAAAATTATA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5209993 271 + 11604778 ATTGTAATGTTGTAAATTGTTTTCACTTTCCCTGTAGAATAAGTTCTTGAGTTTATTTCTTTACCCCATCATTCTATCTTCAAGTCAGGA--ACTTCTGCTTCAATTAAAAAATAAAC-------CCCATTTCTATGAAATTGTTTTGTTAATATTTTG--TTTTTTAATTTACTGTATAATTCAGt---atgtaatatgtaa-----------------------------------------------------tataa-aataagtagta----------------------------ataaatgctt-------aataagat----------------------agaaaat----------------caagatgtaaa-----aagtaaAG--GGTGTCAGTTTAGAAAATTATA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 121812 393 + 36342412 ATTGAATTATTGTGAATTGTTTT-AGTTTTTCCAAATAATGAGATCCTGAGGTTATTTCTTTAGCCTGTCATTATATTTTCAAGCAATGATTAATTTTTTTTAAAT---------------CCTACCAATCTCCTTGAAATTATTCTGTTAACATTTTG--GTTTTTAATTTACTGAACAATTCAGT---ATGTAATATATAACACAGGGTATCCCACTCAGGGAAAACAGGAAATTATAGCTAAACGCACCTTTATACAA-AGTATTCATTATAAACTTTGACAAAGAAGTGGCCAGTACATAGAGACTCTTTTGTAAATAGCTTGTAAATAAATATCTTTAATCTGAAAAAATACATATCACAC----TAAAAATAGCAAATTGTAAACAAGGTAGGCTATGGTTTGAAGAATTACA i otoGar3.GL873530 N 0 C 0 s canFam3.chr30 13397360 307 + 40214260 ATTTTACTGTGGTATATTATTTTTATTTTATCCAAAGAACTAATTCTTGGGTTTATTTG-TTATCTTATCATTATATTTTCAAGTCATGA--ATTCCTGCTCCAGTTTAAAAAGATG--------TTCATTCCTTTGAGGTTATTTGGTTGATATTTTACATTTTGTCATTGACTGCATAATTCATT---ATATAATATACATCATGAAAA---------------------------------------------CATag-aagaagaagga----------------------------gcag---------------gaggaa--gaagagaaggagaaggagaagaaaaaTATGTAATAGTCCATACAAAGATATAAG-----AAGTAAAG--GATATAAGTTTTGAGTCTTACA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1797950 258 - 2868945 ATTTTAATGCCATAAATTGTTTCTACTTTGCCCAGAGAACCAGTCTTTGGTTCTATTT-TTTGCCCTAT-ATTCTATTTTCAAGTCATGA--ATCTCTGCTTAAAGTGATAAAAATT----TCCTAGTATTCCTTTAATATTATTTCATTGATATTCTG---TTTTTAATTGATGACATAAGTCAATATAATATCATATATAATGG--------------------------------------------------TATAAGAATATATAATA-----------------------------------------------TTAGCT---------------------------------------------AAAGATATAAG-----AAATGAAG--GTTATAAATTTGGA-GACAATG i dasNov3.JH579377 C 0 C 0 e manLeu1.NW_012108674v1 31203 1663 + 2620224 I a score=1223875.000000 s hg38.chrUn_KI270749v1 1775 134 + 158759 CTTGCTAATATGGTGAAATAACTCTGACCAAATTAACTTTCCAGCAATAAAAACAAAATTGGAAAACTGGATAAAATATACATGGTAAC--ATGTTAGGTCAGCTTTGTCTGTCTTCAA-ACAACTATAAATATTGT s panTro5.chr1 101782954 134 - 228573443 CTTGCTGATATGGTGAAACAATTCTGACCAAACTAACTTTCCAGCAATAAAAACAAAATTGGAAAACTGGATAAAATATACATGGTAAC--ATGTTAGGTCAGCTTTGTCTGTCTTCAA-ACAACTATAAATATTGT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44361539 136 + 99763055 CTTGCTGATACGGTGAAGTAACTCTGACCAAACTAACCTTCCAGCAATAAAAACAAAATTGGAAAACTGGATAAAATATACATGGTAACATATGTTAGGTCAGCTTTGTCTGTCTTCAA-ACAACTATAAATATTGT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67492087 136 - 121039945 CTTGCTGATACGGTGATGTAACTCTGACCAAACTAACCTTCCAGCAATAAAAACAAAATTGGAAAACTGGATAACATATACATGGTAACATATGTTAGGTCAGCTTTGTCTGTTTGCAA-ACAACTATAAATATTGT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23399936 130 + 169600520 CTTGCTGATATGGTAAA-TAAATCTGACC-AACTAACCTTCCAGCAATAAAAACAAAATTGGAAAACTGGATAAAATATACATGGTAACATATATTAGGTCAGCTTTGTCTGTCTTCAA-ACAACT----ATATTGT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24003915 130 + 171882078 CTTGCTGATATGGTAAA-TAAATCTGACC-AACTAACCTTCCAGCAATAAAAACAAAATTGGAAAACTGGATAAAATATACATGGTAACATATATTAGGTCAGCTTTGTCTGTCTTCAA-ACAACT----ATATTGT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13249065 130 - 40200012 CTTGCTGATATGGTAAA-TAAATCTGACC-AACTAACCTTCCAGCAATAAAAACAAAATTGGAAAACTGGATAAAATATACATGGTAACATATATTAGGTCAGCTTTGTCTGTCTTCAA-ACAACT----ATATTGT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3236847 134 + 7633303 CTTGCTGATATGGTGAA-TAAATCTGACC-AACTAACCTTCCAGCAATAAAAACAAAATTGGAAAACTGGATAAAATATACATGGTAACATATATTAGGTCAGCTTTGTCTGTCTTCAA-ACAACTATAAATATTGT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21938328 134 - 58131712 CTTGCTGATATGGTGAA-TAAATCTGACC-AACTAACCTTCCAGCAATAAAAACAAAATTGGAAAACTGGATAAAGTATACATGGTAACATATGTTAGGTCAGCTTTGTCTGTCTTCAA-ACAACTATAAATATTGT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 32866 134 + 2620224 CTTGCTGATATGGTGAA-TAAATCTGACC-AACTAACCTTCCAGCAATAAAAACAAAATTGGAAAACTGGATAAAATATACATGGTAACATATATTAGGTCAGCTTTGTCTGTCTTCAA-ACAACTATAAATATTGT i manLeu1.NW_012108674v1 I 1663 C 0 s colAng1.NW_012121598v1 2215571 134 + 10629787 CTTGCTGATATGGCGAA-TAAATCTGACC-AATTAACCTTCCAGCAATAAAAACAAAATTGGAAAACTGGATAAAATATACATGGTAACATATGTTAGGTCAGCTTTGTCTGTCTTCAA-ACAACTATAAATATTGT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24178387 135 + 132174527 ATTACAGATATGGTGAAGCAACTCTGACCAAATTAATCCTCCAAAAATAAAAAC-AAATTGTAAAACTGAATAAAATATATATGGTAACATATGTTAGGTTGGCTTCATCTGTCTTCAA-ACAACTATACATATTGT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10563556 131 - 21366645 ATTACAGATATGGTGAAGTAACT----CCAAATTAACCATCCAAAAATAAAAAC-AAATTGTAAAAATGGATAAAATATATATGGTAACATATGTTAGGTTGGCTTCATCTGTCTTCAA-ACAACTATACATATTGT i saiBol1.JH378136 C 0 I 5955 s cebCap1.NW_016107324v1 3720670 135 - 13033340 ATTACAGATATGGTGAAGTAACTCTGACCAAATTACCCCTCCAAAAACAAAAAC-AAATTGTAAAACTGGATAAAATATATATGGTAACATATGTTAGGTTGGCTTCATCTGTCTTCAA-ACAACTATATATATTGT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5210264 133 + 11604778 ATTACAGATATGGTGAAGTAACT--GACCAAATTAACCCTCCAAAAATAAAAAC-AAATTGTAAAACTGGATAAAATATATATGGTAACATATGTTAGGTTGGCTTCATCTGTCTTCAA-ACAATTATACATATTGT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 122205 126 + 36342412 CTTACCGACATGGTGAAGTACTTTTTGCCATGTTAACCCTCCAGCCACAAAAAA-------TAAAAAT--ATAAAACATATATGGCAACCTA-GTTAGTTCTGCTTTGTCTATCTTCAA-ATAACTCTAAATACTGC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13397667 126 + 40214260 CATGCAGACACAATGAAGTAACTATTACC-AA-------TCCAGGCATAGGAA--AATTTATAGAACTAGATAAAATATATAAAACAACTTATGTTGGGTCAGTTTTGTCTGTCTTGAA-ATAACTATAAATATTGT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1798208 130 - 2868945 --TTCAGACATGATAAAATAACTGCTATCAAACTAATCCTCC----ATGCCCCCCAAATT-TGATACAGGATGAAATATATATTGCGACACATGTTGGGTTAGCTAATCCTGTCTTCAGTACAAGTATAAATAGTAT i dasNov3.JH579377 C 0 C 0 a score=759309.000000 s hg38.chrUn_KI270749v1 1909 71 + 158759 TCTACCCTTG----TTACCTATTTATTCTTTTCCATTTTGTTTTGCTCGA-T--TTTTTTC-----TTATAC-CCATTTATTTG s panTro5.chr1 101783088 72 - 228573443 TCTACCCTTG----TTATTTATTTATTCTTTTCCATTTTGTTTTGCTCGA-T--TTTTTTC-----TTATACACCGTTTATTTG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44361675 68 + 99763055 TCTACCcttg----t----tatttattctttttcattttgttttgctcaa-t--ttttttc-----ttATACACCATTTATTTG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67492223 72 - 121039945 TCTACCCTTG----TTATTTATTTATTCTTTTTCGTTTTGTTTTGCTCAA-T--TTTTTTC-----TTATACATCATTTATTTG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23400066 72 + 169600520 TCTACCCTTG----TTATTTATTTATTCTTTTTCATTTTGTTTTGCTCGA-T--TTTTTTC-----TTATACACCATTTATTTG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24004045 72 + 171882078 TCTACCCTTG----TTATTTATTTATTCTTTTTCATTTTGTTTTGCTCGA-T--TTTTTTC-----TTATACACCATTTATTTG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13249195 72 - 40200012 TCTACCcttg----ttatttatttattctttttcattttgttttgctcga-t--ttttttc-----ttATACACCATTTATTTG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3236981 72 + 7633303 TCTACCCTTG----TTATTTATTTATTCTTTTTCATTTTGTTTTGCTCGA-T--TTTTTTC-----TTATACACCATTTATTTG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21938462 72 - 58131712 TCTACCcttg----ttatttatttattctttttcattttgttttgctcga-t--ttttttc-----ttATACACCATTTATTTG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 33000 72 + 2620224 TCTACCCTTG----TTATTTATTTATTCTTTTTCATTTTGTTTTGCTCGA-T--TTTTTTC-----TTATACACCATTTATTTG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2215705 72 + 10629787 TCTACCCTTG----TTATTTATTTATTCTTTTTCATTTTGTTTTGCTCGA-T--TGTTTTC-----TTATACACCATTTATTTG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24178522 72 + 132174527 TCTACTCTTG----TTATTTAGTTATTCTTTTTCATTTTGTTTTGCTTGA-T--TTTTTTC-----TTATACACCATTTATTTG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10569642 73 - 21366645 TCTACCTTTG----TTATTTATTTATTCTTTTTCATTTTGTTTTACTTGATT--TTTTTTC-----GTATACACCATTTATTTG i saiBol1.JH378136 I 5955 C 0 s cebCap1.NW_016107324v1 3720805 76 - 13033340 TCTACTCttgttatttatttatttattctttttcattttgttttgcttga-t--ttttttc-----ttATACACCATTTATTTG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5210397 72 + 11604778 TCTACCCTTG----ttatttatttattctttttcattttgttttgcttga-t--ttttttc-----ttatacaccatttatttG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 122331 76 + 36342412 TAAACTTTTA----CTATTTATTTATTATTTT-CATCTTGTTTTGTTTGA-T--TTTTTTTCCTGGTTATATTCTATTTCCTTG i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13397793 74 + 40214260 TCTACAGTTG----TTATCTCTCTACTGATTTCCATTTTGTTTGGCTTGA-TTAttttttt-----ttattttttatttattta i canFam3.chr30 C 0 I 206 s dasNov3.JH579377 1798338 71 - 2868945 TCTTTTATAG----CTTTTTTTTAATTATTTTCCATTTTCTTTTGCTTGA-T--TTTCTCC-----TGCCTCTCC-TTTATATC i dasNov3.JH579377 C 0 C 0 a score=2851458.000000 s hg38.chrUn_KI270749v1 1980 294 + 158759 ---AGTAAATTTTG-AAAATATCTATTCTTCATTCTTGCTGTTTCTAGTGTGATATATATTTCTCAGATAAAAGG----TATTTTTCCTTTTATCTTTCCCTAAAGTCACTCTACATATATTGCATTTATCTTATATCTGCTTTAAAACCTATTTATGTCTTTTTAGGTCACTTACATCAGAGGAGT----TGTATTGGTGCGGGAA-------GGGGAA---TTTGATTTAATGAAACAATGCATTAAAAATTTGTATTCACTTTGTGATTCAATGATAGTCAATGTGGCATGTAATTTTTTTCTGTCTTTTAAT s panTro5.chr1 101783160 294 - 228573443 ---AGTAAATTTTG-AAAATATCTATTCTTCATTTTTGCTGTTTCTAGTGTGGTATATATTTCTCAGATAAAAGA----TATTTTCCCTTTTTTCTTTCCCTAAGCTCACAGTACATATATTGCATTTATCTTATATCTGCTTTAAAACCTAATTATGTCTTTTTAGATCACTTACATCAGAGCAGT----TGTGTTGGTGCGGGAA-------GGGGAG---TTTGATTTAATGAAACAATGCATTATAAATTTGTATTCACTTTGTGATTCAATGATAGTCAATGTGGCATGTAATTTTTTTCTGTCTTTTAAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44361743 296 + 99763055 ---AGTAAGTTTTG-AAAATATCTGTTCTTCATTTTTGCTATTTCTAGTGTGGTATATATTTCTCAGATAAAATATACTTATTTTCTCTTTTATCTTTTACTAAACTCACACTACATATATTTCATTTATCTTATATCTGCTTTAAAACCTATTTATGTCTTTTTAGGTCACTTACATCAGAGGAGT----TGTATTGGTGAGGGTA-------GGGGAG---TTTGATTTAATGAAAC--TGCATTAAAAATTTGTATTCACTTTGTGACTCAATGATAGTCAATGTGGCATGTAATTTTTTTCTGTCTTTTAAT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67492295 297 - 121039945 ---AATAAGTTTTG-AAAATATCTGTTCTTCATTTTTGCTGTTTCTAGTGTGGTGTATGTTTTTCAGATAAAAGATATTTATTTTCTCTTTTATCTTTTCCTAAGCTCACATTACATGTATTGCATTTGTCTTATATCTGCTTTAAAATCTATTTATGTCTTTTTAGGTCACTTACATCAGAGGAGT----TATATTGGTGCGGGTA-------GGGGAG---TTTGATTTAATGAAACAATGCATTAAAAATTTGTATTCACTTTGTGACTCAATGATAGTCAATGTGGCATGTAA-TATTTTCTGTCTTTTAAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23400138 298 + 169600520 ---AGTAAATTTTG-AAAATATTTATTTTTCATTTTTGCTGTTTCTAGTGTGGTATATATTTCTCCGATAAAAGATATTTATTTTCTCTTTTATCTTTCCCTAAGCTCACACTACATATATTGCATGTATCTTATATCTACGTTAAAACCTATTTATGTCTTTTTAGGTCACTTACATCAGAGGAGT----TGTATTGGTGCAGATA-------GGGGAG---TTTGATTTAATGAAATAATGCATTAAAAATTTGTGTTCACTTTGTGACTCAATGATAGTCAGTGTGGCACGTAATTTTCTTCTGTCTTTTAAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24004117 298 + 171882078 ---AGTAAATTTTG-AAAATATTTATTTTTCATTTTTGCTGTTTCTAGTGTGGTATATATTTCTCCGATAAAAGATATTTATTTTCTCTTTTATCTTTCCCTAAGCTCACACTACATATATTGCATGTATCTTATATCTACGTTAAAACCTATTTATGTCTTTTTAGGTCACTTACATCAGAGGAGT----TGTATTGGTGCAGATA-------GGGGAG---TTTGATTTAATGAAATAATGCATTAAAAATTTGTGTTCACTTTGTGACTCAATGATAGTCAGTGTGGCACGTAATTTTCTTCTGTCTTTTAAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13249267 298 - 40200012 ---AGTAAATTTTG-AAAATATTTATTTTTCATTTTTGCTGTTTCTAGTGTGGTATATATTTCTCCGATAAAAGATATTTATTTTCTCTTTTATCTTTCCCTAAGCTCACACTACATATATTGCATGTATCTTATATCTACGTTAAAACCTATTTATGTCTTTTTAGGTCACTTACATCAGAGGAGT----TGTATTGGTGCAGATA-------GGGGAG---TTTGATTTAATGAAATAATGCATTAAAAATTTGTGTTCATTTTGTGACTCAATGATAGTCAGTGTGGCACGTAATTTTCTTCTGTCTTTTAAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3237053 294 + 7633303 ---AGTAAATTTTG-AAAATATTGATTCTTCATTTTTGCTGTTTCTAGTGTGGTATATATTTCTCAGATAAAAGATATTTATTTTCTCTTTTATCTTTCCCTAAGCTCACACTGCATATATTGCATGTATCTTATATCTACGTTAAACC----TTATGTATTTTTAGGTCACTTACATAAGAGGAGT----TGTATTGGTGCAGATA-------GGGGAG---CTTGATTTAATGAAATAATGCATTAAAAATTTGTGTTCACTTTGTGACTCAATGATAGTCAGTGTGGCATGTAATTTTCTTCTGTCTTTTAAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21938534 298 - 58131712 ---AGTAAATTTTG-AAAATATTTATTCTTCATTTTTGCTGTTTCTAGTGTGGTATATATTTCTCAGATAAAAGATATTTATTTTCTCTTTTATCTTTCCCTAAGCTCACTCTACATATATTGCATGTATCTTATATCTACTTTAAAACCTATTTATGTCTTTTTAGGTCACTTACATCAGAGGAGT----AGTATTGGTGCAGGTA-------GGGGAG---TTTGATTTAATGAAATAATTCATTAAAAATTTGGGTTCACTTTGTGACTCAATGATAGTCAGTGTGGCATGTAATTTTCTTCTGTCTTTTAAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 33072 298 + 2620224 ---AGTAAATTTTG-AAAATATTTATTCTTCATTTTTGCTGTTTCTAGTGTGGTATATATTTCTCAGATAAAAGATATTTATTTTCTCTTTTATCTTTCCCTAAGCTCACACTACATATATTGCATGTATCTTATATCTACGTTAAAACCTATTTATGTCTTTTTAGGTCACTTACATCAGAGGAGT----TGTATTGGTGCAGATA-------GGGGAA---TTTGATTTAATGAAATAATGCATTAAAAATTTGTGTTCACTTTGTGACTCAATGATAGTCAGTGTGGCATGTAATTTTCTTCTGTCTTTTAAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2215777 297 + 10629787 ---AGTAAGTTATG-AAAATATTTATTCTTCATTTTTGCTGTTTCTAGTGTGGTATATATTTCTCAGATAAAAGATATTTATTTTCTCTTTTATCTTTCCCTAAGCTCACACTACATATATTGCATGTATTTTATAGGTACTTTAAAACCTATTTATGTCTTTTTAGGTCACTTACATCAGAGGAGT----TGTATTGGTGCGGGTA-------GGGAAG---TTTGATTTAATGAAATAATGCATTAAAAATTTGTGTTCACTTTGTGACTCAATGATAGTCAGTGTGGCATGTAATTTTCTTC-ATCTTTTAAT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24178594 296 + 132174527 ---AGTAAATTTTG-AAAAAGTCTATTCTTCATTTTTGCTA--TCTAGCATAGTATATACTTCTCAGATAAAAGATATTTATTTTCTCTTTTATCTTTCCCTAAGCTCACAGTACATATATTACATTTGTCTCATATCTGCTTTAAAACCTATTTATCGCTTTTTAGGTCACTTACATCAGAGGAGT----TGTATTGATGTGGGCA-------GGAGAG---TTTGATTTAATGGAACGATGCATTAAAATTCTTTATTCACTTTATGACTCAATGATAGTCAATGTAGCATGTAATTTTTTTCTGTTTTTTAAT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10569715 296 - 21366645 ---AGTAAATTTTGAAAAAAATCTATTCTTCGTTTTTGCTA--TCTAGCATGGTATATATTTCTCAGATAAAAGATATTTATTTTCTCTTTTATCTTTCCCTAAGCTCACAGTACATCTATTACATTTATCTCATATCTGCTTTAAAACCTATTTATCACTTTTTAGGTCACTTACATCAGAGGAGT----TGTATTGACATGGGTA-------GGGGAG---TTTGATTTAATGGAATGATGCATTAAAATTTTTTATTCACTTTATGACTCAGTGATAGTCAATGTAGCATGTAA-GTTTTTCGGTCTTTTAAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3720881 296 - 13033340 ---AGTAAATTTTG-AAAAAATCTATTCTTCATTTTTGCTA--TCTAGCATGGTATATATTTCTCAGATAAAAGATATTTATTCTCTCTTTTATTTTTCCCTAAGCTCACAGTACCTATATTACATTTATCTCATAACTGCTTTAAAACCTATTTATTGCTTTTTAGGTCACTTACATCAGAGGAGT----TGTATTGATGTGGGTA-------GGGGAG---TTTGATTTAATGGAACGATGCATTAAATTTTTTTATTCACTTTATGACTCAGTGATAGTCAATGTAGCATGTAATTTTTTTCTGTCTTTTAAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5210469 295 + 11604778 ---AGTAAATTTTG-AAAAAATCCATTCTTCATTTTTGCTA--TCTAGCATGGTATATATTTCTCAGATAAAAGATATTTATTTTCTCTTTTATCTTTCCCTAAGCTCACAGTACATATATTACATTTATCTCATATCTGCTTTAAAACCTATTTATCGCTTTATAGGTCACTTACATCAGAGGAGT----TGTATTGGTGTGAGTA-------GGGGAG---TTTGATTTAATGAAACGATGCATTAAAATTTTTTGTTCACTTTATGACTCAATGATAGTCAATGTAGCATGTAA-TTTTTTCTGTCTTTTAAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 122407 297 + 36342412 ---ACTAAATATTG-AAAATATCTATCCTTCAAT-TTGCTATTTTTAGTGTGATATGATTTTTGCAGATTGAAGATATAAATTTTCTCTTTTATCTTT-CCTAAGTTCACTTTTCATATATTGCATTTATTTTATACCTTGTTTAGACCCTATATCTCTTTCTGTGGATAACTTATATTAGAAGAAT----TCCATTGGTATGGGGA-------AGATGATGTTTTGATTTGATGAAACCGTTCATTTCAA-TTTTTATTCACTTTTTGACTCAATGATAATTAATTTGACATGT-ATTCTTGTCCATCTATTATT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13398073 280 + 40214260 ---AGTAAATTCTG-AAAACATCTATTCTCCATT-TTGCTATTCCTA-------CTATATTTCTGAAATTAAAGAT-TTTATTTTCTTTTTT-------CCTAAGCTCACTTTTCATGTATTTCATTTATCTTATATCTACCTTAAGTCTTA-CTAACTCATTTTTGATCATTTATGTCAAAGGATT----CCTATTTGTTTGGGAAGTTTCTTGATTGT---TTTGATTTTAAGGGATAATGTTTTTTG--TTTTTTGTTTTTTTGTGGTTTTTGGCTATTT------GCATAtttttttttcttttttttttat i canFam3.chr30 I 206 I 3275 s dasNov3.JH579377 1798409 282 - 2868945 CTTAATTACATTTA-AAAATATCTATACTTTATT-TTGCTA-TCCTAGTGTGATATATATATCTGAAAGTATAGAGATTTGCTTACTCTTTTATTATTTCCTAAGCTCAATTTTCAAATCTTCCAGTAATCTTATAGCTACTTTGGACCCTATCT----CTTTTTTGATCATTTATATCAGAAGAGTACTATGCATTTGT-----------------------TTTGGTTTTATGAGACTATATATTCCAAATTTTCTCTAGCTTTGTGGCTTAA-GGCAATGAATGTGGTATGT-ATTCTTGTCTACCTTATT-- i dasNov3.JH579377 C 0 C 0 a score=1785718.000000 s hg38.chrUn_KI270749v1 2274 200 + 158759 ATTATATTGTCTTTGTTGCTTTTCTC----T---AACATGAAATATATGTTACAC-AGGCACAGTGCTGGTGTCTTTTCTATTATTATTTTTGAATTGGACTCATTATTGTCTGA----GCTATTTATTAAAATGGTGAAGGAAAAGATCAGTAAAGTAAATTATGTCAACAGGCAGTATCAATTTAGGTCTATTTTCCATGAATATTTTCT s panTro5.chr1 101783454 200 - 228573443 ATTATATTGTCTTTGTTGCTTTTCTC----T---AACATGAAACATATGTTACAC-AGGCACAGTGCTGGTATCTTTTCTATTATTATCTTTGAATGAGACTCATTATTGTCTGA----GCTATTTATTAAAGTGGTGAAGGAAAAGATCAGTAAAGTAAATTATGTCATTAGGCAGTATCAATTTAGGTGTATTTTCCATGAATATTTTCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44362039 200 + 99763055 GTTATATTGTCTTTGTTGCTTTTCTC----T---AACATCAAATATATGTTACAC-AGGCACAGTGCTGGTATCTTTTCTTTTATTATCTTTGAATGGGACTCATTATTGTCTGA----GCTATTTATTAAAATGGTGAAGGAAAAGATCAGTAAAGTAAATTATGTCAATAGGCAGTATCAATTTAGATCTGTTTTCCAAGAATATTTTCT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67492592 200 - 121039945 GTTATATTGTCTTTGTTGGTTTTCTC----T---AACATCAAATATATGTTACAC-AGGCACAGTGCTGGTATCTTTTCTATTATTATCTTTGAATGGGACTCGTTATTGTCTGA----GCTGTTTATTAAAATGGTGAAGGAAAAGATCAGTAAAGTAAATTATGTCAATAGGCAGTATCAATTTAGGTCTATTTTCCATGAATATTTTCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23400436 187 + 169600520 GTTATATTGTCTTTGTTGCTTTTCTC----T---AGCATGAAATATATGTT----------CAGTGCTGGTATCTTTTCTATTATTATCTTTGAATGGGACTCATTATTGTCTGA----GCTATTTATTAAAATGGTGAAGGAAAAGATCAGTAAAGTAAATTATGTCA----ACAGTATCAATTTAGGTCTGTTTTCCACGAATATTTTCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24004415 187 + 171882078 GTTATATTGTCTTTGTTGCTTTTCTC----T---AGCATGAAATATATGTT----------CAGTGCTGGTATCTTTTCTATTATTATCTTTGAATGGGACTCATTATTGTCTGA----GCTATTTATTAAAATGGTGAAGGAAAAGATCAGTAAAGTAAATTATGTCA----ACAGTATCAATTTAGGTCTGTTTTCCACGAATATTTTCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13249565 187 - 40200012 GTTATATTGTCTTTGTTGCTTTTCTC----T---AGCATGAAATATATGTT----------CAGTGCTGGTATCTTTTCTATTATTATCTTTGAATGGGACTCATTATTGTCTGA----GCTATTTATTAAAATGGTGAAGGAAAAGATCAGTAAAGTAAATTATGTCA----ACAGTATCAATTTAGGTCTATTTTCCACGAATATTTTCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3237347 187 + 7633303 GTTATATTGTCTTTGTTGCTTTTCTC----T---AGCATGAAATATATGTT----------CAGTGCTGGTATCTTTTCTATTATTATCTTTGAATGGGACTCATTATTGTCTGA----GCTATTTATTAAAATGGTAAAGGAAAAGATCACTAAAGTAAATTATGTCA----ACAGTATCAATTTAGGTCTGTTTTCCACGAATATTTTCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21938832 191 - 58131712 GTTATATTGTCTTTGTTGCTTTTCTC----T---AGCATGAAATATATGTT----------CAGTGCTGGTATCTTTTCTATTATTATCTTTGAATGGGACTCATTATTGTCTGA----GCTATTTATTAAAATGGTGAAGGAAAAGATCAGTAAAGTAAATTATGTCAACAGACAGTATCAATTTAGGTCTGTTTTCCACGAATATTTTCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 33370 187 + 2620224 GTTATATTGTCTTTGTTGCTTTTCTC----T---AGCATGAAATATATGTT----------CAGTGCTGGTATCTTTTCTATTATTATCTTTGAATGGGACTCATTATTGTCTGA----GCTATTTATTAAAATGGTGAAGGAAAAGATCAGCAAAGTAAATTATGTCA----ACAGTATCAATTTAGGTCTGTTTTCCACGAATATTTTCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2216074 185 + 10629787 GTTATATTGTCTTTGTTGCTTTTCTC----T---AACATGAAATATATGTT----------CAGTGCTGGTATCTTTTCTATTATTATCTTTGAATGGGACTCATTATTGTCTGA----GCCATTTATTAAAATGGTGAAGGAAAAGATC-----AGTAAATTATGTCAACAGACAGTATCAATTTAGGTCTG-TTTCCATGAATATTTTCT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24178890 200 + 132174527 GTCATATTGTCTTTTTTGTTTTTCTC----T---AACATGAAATATATGTTACAC-AGTCACAGTGATGGTATCTTTTTTATTATTATCCTTGAATAAGACTCATTATTGTCTGA----GTTATATATTAAAATGGTGAAGGAAGAGATTAGTAACGTAAATTATGTCAATAGGTAGTAACAATTTAGGTCTATTTTCTCTGAATATTTTCT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10570011 200 - 21366645 GTCATATTGTCTTTTTTGTTTTTCTC----T---AACATGAAATATATGTTACAC-AGTCACAGTGATGGTATCTTTTTTATTATTATCCTTGAATGAGACTCATTATTGTCTGA----GCTATACATTAAAATGGTGAAGGAAGAGATTAGTAACGTAAATTATGTCAATAGGTAATAACAATTTAGGTCTATTTTCCCTGAATATTTTCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3721177 200 - 13033340 GTCATATTGTCTTTTTTGTTTTTCTC----T---AACATGAAATATATGTTACAC-AGTCACAGTGATGGTATCTTTTTTATTATTATCCTTGAATGAGACTCATTATTGTCTGA----GCTATATATTAAAATGGTGAAGGAAGAGATTAGTAACGTAAATTATGTCAATAGGTAGTAACAATTTAGGTCTATTTTCCCTGAATATTTTCT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5210764 200 + 11604778 GTCATATTGTCTTTTTTGTTTTTCTC----T---AACATGAAATATATGTTACAC-AGTCACAGTGATGGTATCTTTTTTATTATTATCCTTGAATGAGACTCATTACTGTCTGA----GCTATATATTAAAATGGTGAAGGAAGAGATTAGTCACGTAAATTATGTCAATAGGTAGTAACAATTTAGGTCCATTTTCCCTGAATCTTTTCT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 122704 190 + 36342412 CTCATATTGTCCTTATTGATTTTTCCTATTT---AACACGAA--ATACGTTACACAAGGCATAATTGTGGTATCTTGT-GATTATTATGTTTGAATAGAGC------CTGTCTGA----GCTATTGATTAAAATTGTAAAGCGGGAAATC-----AGTAAATTATATCAATAGGCAACATCAATTCAG-TCTGTTTTCCTTAAATATTTTCT i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1798691 200 - 2868945 GTCACATTGTACTTGTTGCTTTTTTC----TGTCAGCTAGAAATATATTTTGCAT-AGGTAAAATGGAGGCAACTTTTAGATTATTATCTTCAAATGGAGCCCTTTTTTGTTTAGGCCTGCTCTTTGTTAAAATGGTAGAGGAGGA------TACAGTAAATTATGTCAGAAGATGGCATCAATT-AGGTCTATTTTACTTGACCTTTTCCT i dasNov3.JH579377 C 0 C 0 e canFam3.chr30 13398353 3275 + 40214260 I a score=63118.000000 s hg38.chrUn_KI270749v1 2474 6 + 158759 CAGCAA s panTro5.chr1 101783654 6 - 228573443 CAGCAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44362239 6 + 99763055 TAGCAA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67492792 6 - 121039945 CAGCAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23400623 6 + 169600520 CAGCAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24004602 6 + 171882078 CAGCAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13249752 6 - 40200012 CAGCAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3237534 6 + 7633303 CAGCAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21939023 6 - 58131712 CAGCAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 33557 6 + 2620224 CAGCAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2216259 6 + 10629787 TAACAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24179090 6 + 132174527 CAGCAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10570211 6 - 21366645 CAGCAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3721377 6 - 13033340 CAGCAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5210964 6 + 11604778 CAGCAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 122894 6 + 36342412 CAGCAA i otoGar3.GL873530 C 0 C 0 e canFam3.chr30 13398353 3275 + 40214260 I e dasNov3.JH579377 1798891 0 - 2868945 C a score=4892361.000000 s hg38.chrUn_KI270749v1 2480 574 + 158759 Ctgtggtgttatgatgtat--------------------------------------------attggttttcatccacagttcctggcttataactcccctagctcttgttacaatcttttgttataatattggctgtgttaggtctcaggagcaggcttctcaccttctcatggccttttttcatttttatgttcctgcctttctggttgtggctcttaagacgatctcaggagagagtcccaccctataccctggagggaggaatgctgatatcatgaaacttccatgaaaatccaggaggacagggttcagtgatcttctgggcagttgaacacatggatgttcctggagggtggcccacccagggatgacatggaagctctgctcccttccccca-tgcattgctctaaatgtctcttcatctatgtcctttgcaatatcctttataatacaccatgaaatgtaagtgtttccctgagttccgtgagccactccaacaaattaatcaaacccaaagagggggtcatgagaa-cccaacttgaagccagtaggtcagaagttc-agaggcctgggcttgtggctggtaggttgagggtgggcagtcttggggactg--------a s panTro5.chr1 101783660 574 - 228573443 Ctgtggtgttatgatatat--------------------------------------------attggttttcatccacagttcctggcttataactcgcctagcacttattacagtcttttgttataatattgggtgtgttaggcctcaggagcaggcctctcacctcctcatggctttttttcatttttatgttcctgcctttctggttgtgggtcttaagaccatctcagcagagagtcccaccctataccctggagggaggaatgctgatatcatgaaacttccatgaaaatccaggaggacagggttcaatgagtttctgggtagttgaacacatggatgttcctggagggtggccaacccagggatggcatggaagctcagctcccttccccca-tgcattgctctaagtgtctcttcatctatatcctttgcaatatcctttataatacaccaggaaatgtaagtgtttccctgagttctgtgagccactccaacaaattaatcaaacccaaagaaggggtcatgagaa-cccaacttgaagccaataggtcagaagttc-agagtcctggacttgtggctggtagattgagggtgggcagtcttggggactg--------a i panTro5.chr1 C 0 C 0 s panPan2.chr15 44362245 565 + 99763055 Ctgtggtgttatgatatat--------------------------------------------attggttttcatccacagttcctggcttataactcccctagcccttgttacagtcttttgttataatattgggtgtgttaggccttaggatcaggcctctcaccttctcatggccttttttcatttttatgttcctgcctttctggttgtgggtcttaagaccatctcaggagagagtcccaccctataccctggagggaggaatgctgATATCatgcaacttccatgaaaatccaggaggacagtgttcagtgagcttctgcatagctgaacacatggatgttcctggatggtggcccgcccagggatggcatggaagctctgctcccttcctcca-cgcattgctctaagtgtctctttgtctatatcctttgcaatatcctttataatacac---------tcagtgtttccctgagttctgtgagccactccaacaaattaatcaaacccaaagagggggtcatgagaa-cccaacttgaagccagtaggtcagaagttc-agaggcctggacttgtggctggtaggttgagggtgggcagtcttggggactg--------a i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67492798 574 - 121039945 Ctgtggtgttatgatatat--------------------------------------------attggtttccatccacagttcctggcttataactcccctagcccttgttacagtcttttgttttaatattaggtgtgtcaggcctcaggagcaggcctctcaccttctcatggccttttttcatttttatgttcctgcctttctgattgccggtcttaagaccatctcaggagagagtcccaccctataccctggagggaggaatgcgcatatcatgaaacttccatgaaaatccaggaggacagggttcagtgcgcttctggatagctgaacacatggatgttcctagagggtggcccgcccagggatggcatggaagctctgctcccttcctcca-tgcatagctctaagtgtctcttcgtctatatcctttgcaatatcctttataatacatcagtaaatgtaagtgtttccctgagttctgtgggctactccaacaaattaatcaaa-ccaaagagggtgtcatgagaatcccaacttgaagccagtaggtcagaagttc-agaggcctggacttgtggctggtaggttgagggtgggcagtcttggggactg--------a i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23400629 583 + 169600520 Ctgtggcgttatgatatat--------------------------------------------attggttttcatccacatttcctggcttataactcccctagcccttgttacagtcttttgttataatattgggtgtgttaggcctcaggagcagacccctcatcttctcatggccttttttcatttttatgttcctgcctttctggttgtgggtcttaagaccatctcaggagagagtcccaccctataccctggagggaggaatgctgATATCatgaaacttccatgaatatccaggaggacagggttccatgagattctggatagccgaacacatggatgttctgggagggtggcccgcccagggatggcatggaaactctgctccctttcccca-cgcattgctctaagtgtctcttcatctatatcctttgcaatatcctttataatacaccagtaaatgtaagtgtttctctgagttctgtgagccactccaacaaattaatcaaatccaaagagggggtcatgagaaccccaacttgaagccagtaggtcagaagttc-agaggcctggacttgcggctggtaggttgagggtgggcagtcttgggaactgagccttcaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24004608 583 + 171882078 Ctgtggcgttatgatatat--------------------------------------------attggttttcatccacatttcctggcttataactcccctagcccttgttacagtcttttgttataatattgggtgtgttaggcctcaggagcaggcccctcatcttctcatggccttttttcatttttatgttcctgcctttctggttgtgggtcttaagaccatctcaggagagagtcccaccctataccctggagggaggaatgctgATATCatgaaacttccatgaatatccaggaggacagggtaccatgagattctggatagccgaacacatggatgttctgggagggtggcccgcccagggatggcatggaaactctgctccctttcccca-cgcattgctctaagtgtctcttcatctatatcctttgcaatatcctttataatacaccagtaaatgtaagtgtttctctgagttctgtgagccactccaacaaattaatcaaatccaaagagggggtcatgagaaccccaacttgaagccagtaggtcagaagttc-agaggcctggacttgtggctggtaggttgagggtgggcagtcttgggaactgagccttcaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13249758 583 - 40200012 Ctgtggcgttatgatatat--------------------------------------------attggttttcatccacatttcctggcttataactcccctagcccttgttacagtcttttgttataatattgggtgtgttaggcctcaggagcaggcccctcatcttctcatggccttttttcatttttatgttcctgcctttctggttgtgggtcttaagaccatctcaggagagagtcccaccctataccctggagggaggaatgctgATATCatgaaacttccatgaatatccaggaggacagggttccatgagattctggatagccgaacacatggatgttctgggagggtggcccgcccagggatggcatggaaactctgctcccttttccca-cgcattgctctaagtgtctcttcatctatatcctttgcaatatcctttataatacaccagtaaatgtaagtgtttctctgagttctgtgagccactccaacaaattaatcaaatccaaagagggggtcatgagaaccccaacttgaagccagtaggtcagaagttc-agaggcctggacttgtggctggtaggttgagggtgggcagtcttgggaactgagccttcaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3237540 583 + 7633303 Ctgtggtgttatgatatat--------------------------------------------attggttttcatccacgtttcctggcttataactcccctagcccttgttacagtcttttgttataatattgggtgtgttaggcctcaggagcaggcccctcatcttctcatggccttttttcatttttatgttcctgcttttctggttgtgggtcttaagaccatctcaggagagagtcccaccctataccctggagggaggaatgctgATATCatgaaacttccatgaatatccaggaggacagggttcagtgagattctggatagccgaacacatggatgttctgggagggtggcccgcccagggatggcatggaagctctgctccctttcccca-cgcattgctctaagtgtctcttcatctatatcctttgcaatatcctttataatacaccagtaaatgtaagtgtttctctgagttctgtgagccactccaacaaattaatcaaatccaaagagggggccgtgagaaccccaacttgaagccagtaggtcagaagttc-agaggcctggacttgtggctggtaggttgagggtgggcagtcttgggaactgagccttcaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21939029 583 - 58131712 Ctgtggtgttatgatatat--------------------------------------------attggttttcatccacatttcctggcttataactcccctagcccttgttacagtcttttgttataatatcgggtgtgttaggcctcaggagcaggcccctcatcttctcatggccttttttcatttttatgttcctgcctttctggttgtgggtcttaagaccatctcaggagagagtcccaccctataccctggagggaggaatgctgATATCatgaaacttccatgaaaacccaggagggcagggttcaatgagattctggatagccgaacacatggatgttccgggagggtggcccgcccagggatggcatggaagctctgctccctttcccca-cgcattgctctaagtgtctcttcatctatatcctttgcaatatcctttataatacaccagtaaatgtaagtgtttctctgagttctgtgagccactccaacaaattaatcaaatccaaagacggggtcatgagaaccccaacttgaagccagtagatcagaagttc-agaggcctggacttgtggctggtaggttgagggtgggcagtcttgggaactgagccttcaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 33563 583 + 2620224 CTCtggtgttacgatatat--------------------------------------------attggttttcatccacgtttcctggcttataactcccctagcccttgttacagtcttttgttataatattgggtgtgttaggcctcaggagcaggcccctcatcttctcatggccttttttcatttttatgttcctgcctttctggttgtgggccttaagaccatctcaggagagagtcccaccctataccctggagggaggaatgctgATATCatgaaacttccgtgactatccaggaggacagggttccatgagattctggatagccgaacacatggatgttctgggagggtggcccgcccagggatggcatggaagctctgctccctttcccca-cgcattgctctaagtgtctcttcatctatatcctttgcaatatcctttataatacaccagtaaatgtaagtgtttctctgagttctgtgagccactccaacaaattaatcaaatccaaagagggggtcatgagaaccccaacttgaagccagtaggtcagaagttc-agaggtctggacttgtggctggtaggttgagggtgggcagtcttgggaactgagccttcaa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2216265 578 + 10629787 Ctgtggtgttatgatatat--------------------------------------------attggttttcatccacatttcctggcttataactcccctagcccttgttacagtcttttgttataatattgggtgtgttaggcctcaggagcaggcccctcatcttctcatggccttttttcatttttatgttcctgcctttctggttgtgggtcttaagaccatctcaggat-gagtcccaccctataccctggagggaggaatgctgATATCatgaaacttccatgaaaatgcaggaggacagggttcaatgagattctggatagctgaacacatggatgttccgagagggtggcccgcccagggatggcatggaagctctgcttcctttcccca-cgcattgctctaagtatctcttcatctatatcctttgcaatatcctttataatacaccagtaaat----gtgtttctctgagttctgtgagccactgcaacaaattaatcaaatccaaagagggggtcatgagaaccccaacttgaagccagtaggtcagaagttc-agaggcctgaacttgtggctggtaggttgagggtgggcagtcttgggaactgagccttcaa i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24179096 619 + 132174527 CtgtggtgttttgagatatagatagatagatagataggtagatagatagatagatagatagagatatgttttcctccacagttcctggcttataactctcatagcccttgctacagatttttgctataatgttgggtgtgttaggcctcccgagcagtcctctcactttctcatggcctcctttcattattatgtttgtgcctttctggttgtgggtcttaagaccatctcagaagagagtcccaccctataccctggagggaggaatgctgATGTCatcaaacttccataaaaatccaggaggacagggttcagtgagcttctggatagctgaacacatggaagttcctggagggtggcccacccaggaatggcatgaaagctctgctctccttccccatcacattgctctagatgtctctttgtctatatccttgtcaatatcctttataataaacc-gtaaatttaaatgtttccctgcattctgtgagccactccaacaaattaatcaaacccaaagagggggtcatgagaaccccaacttaaagccagtaggtcagaa-ttcacgaggcctagagttgtgactgggtggttgagggtgggcagtcttggggactga-------- i calJac3.chr10 C 0 I 8 s saiBol1.JH378136 10570217 591 - 21366645 Ctgtggtgttatgagatat------------------------------atatatatatatatatatgttttcatccacagttcctggcttataactctcatagcccttgctacagtcttttgctataacgttgggtgtgttaggcctcaggagcagacctctcactttctcgtggcctcctttcattcttatgtttctgcctttctggttgtgggtcttaagaccatctcagaagagagtcccaccctataccctggaggaaggaatgctgatgtcatcaaatttccataaaaaaccaggaggacagggttcagtgagcttctggatagctgaacacatggaagtccctggagggtggcccatgcaggaatggcatggaagctctgctccccttccccttcacattgctctagatgtctctttgtctatacccttggcaatatcctttataataaaccagtaaatttaaatgtttccctgagttctgtgagccactccaacaaattaatcaaacccaaagagggggtcatgagaaccccaacttgaagccagtaagtcggaagttccagaggcctggagttatgactgggaggttgagggtgggcagtcttgggaactga-------- i saiBol1.JH378136 C 0 I 352 s cebCap1.NW_016107324v1 3721383 591 - 13033340 Ctgtggtgttatgatatat------------------------------atatatatatatatatatgttttcatccacagttcctggcttataactctcatagcccttgctacagtcttttgctatactgttgggtgtgttaggcctcaggagcaggcctctcactttctcatggcctcctttcattcttatgcttctgccattctggttgtgggtcttaagaccatcccagaagagagtcccaccctataccccggagggaggaatgctgatgtcatcaaacttccataaaaatccagaaggacagggttcagtgagcttctggatagctgaacacatggaagttcctggagggtgacccacccagaaatggcatggaagctctgttccccttccccctcacattgctctagatgtctctttgtctatatccttggcaatatcctttataataaaccagtaaatttaaatgtttccctgagttctgtgagccactccaacaaattaatcaaacccaaagagggggtcatgagaactccaacctgaagccagtaagtcagaagttccagaggcctggagttgtgactgggaggttgagggtgggcagtcttggggactga-------- i cebCap1.NW_016107324v1 C 0 I 8 s aotNan1.NW_018501505v1 5210970 577 + 11604778 Ctgtggtgttatgatatat--------------------------------------------atatgttttcatccacagttcctggcttataactctcatagcccttgctacagtcttttgctataatgttgggtgtgttaggcctcaggagcaggcctctcactttctcatggactcctttcattcttatgtttctgcctttctggttgtgggtcttaagaccatctcagaagagagtcccaccctataccctggagggaagaatgctgATGTCatcaaacttccataaaaatccaggaggatagggttcagtgagcttctggatagctgaacacatggaagttcctggagggtggcccacccaggaatggcatggaagctctgctccccttccctcttacattgctctagatgtctctttgtctatatccttggcaatatcctttataataaaccagtaaatttaaatgtttccctgagttctgtgagccactccaacaaattaatcaaacccaaagagggggtcatgagaaccccaacttgaagccagtaggtcagaagtttcagagtcctggagttgtgactgggaggttgagggtgggcagtcttggggactaa-------- i aotNan1.NW_018501505v1 C 0 I 8 e otoGar3.GL873530 122900 0 + 36342412 C e canFam3.chr30 13398353 3275 + 40214260 I e dasNov3.JH579377 1798891 0 - 2868945 C a score=1504049.000000 s hg38.chrUn_KI270749v1 3054 195 + 158759 cctgtgagacctgacactatctccaggtagacagtgtagtgtcagaactgaattagaggacactcagctggtgtctgctccttggtgtaggtatggag-gaaaaaatgcacacatttggtcacagaagtcttctgtgttgctgattgatctttgtggtgtgagactagaggaaaa--acatagagt--gttttctctaca s panTro5.chr1 101784234 195 - 228573443 cctgtgagatctgacactatctccaggtacacagtgtagtgtcagaactgaattagaggacactcagctggtgtctgctccttggtgtatgtatggag-gaataaaccgacacatttagtcacagaagtcttctgtgttgctgattgatatttgtggtgtgagactaaaggaaaa--acagagaga--gttttctctaca i panTro5.chr1 C 0 C 0 s panPan2.chr15 44362810 197 + 99763055 cctgtgagatgtgacactacctccaggtagacagtgtagtgtccgaactgaattagaggccactcagctggtgtctgctccttggtgtatgtatggag-gaaaaaacctgcacatttggtcacagaagtcttctgtgttgctgattgatctttgtggtgtgagactagaggaaaaacacagagaga--gttttctctaca i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67493372 193 - 121039945 cctgtgagatgtgacactatctccaggtagacagtgtagtgtcagaactgaattagaggacactcagctggtgtctgctccttggtgtatgtatggag-gaaaaaacccacacatttggtcacagaagtcttctgtgttgctgattgatctttgtggtgtgagactagaggaaaa--acacaga----gttttctctaca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23401212 187 + 169600520 cctgtgagat------ctatctccaggtagacggtgtagtgtcagaactgaattagaggacactcagctggtgtctactgcttggtgtatgtatggaa-gaaaaaacctacacatttggtcacagaagtcttctgtgttgctgattaatctttgtggtgtgagactagaggaaaa--acacaga----gttttctctaca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24005191 187 + 171882078 cctgtgagat------ctatctccaggtagacggtgtagtgtcagaactgaattagaggacactcagctggtgtctactgcttggtgtatgtatggaa-gaaaaaacctacacatttggtcacagaagtcttctgtgttgctgattaatctttgtggtgtgagactagaggaaaa--acacaga----gttttctctaca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13250341 187 - 40200012 cctgtgagat------ctatctccaggtagacggtgtagtgtcagaactgaattagaggaccctcagctggtgtctactgcttggtgtatgtatggaa-gaaaaaacctacacatttggtcacagaagtcttctgtgttgctgattaatctttgtggtgtgagactagaggaaaa--acacaga----gttttctcTGCA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3238123 185 + 7633303 cctgtgagat------ctatctccaggtagacggtgtagtgtcagaactgaattagaggacactcagctggtgtctactgtttggtgtatgtatggaa-gaaaaaacctacacatttggtcacagaagtcttctgcgttgctgattaatctttgtggtgtgagactagaggaaaa----acaga----gtttTCTCTGCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21939612 187 - 58131712 cctgtgagat------ctatctccaggtagatggtgtagggtcagaactgaattagaggacgctcagctggtgtctgctgcttggtgtatgtatggaa-gaaaaaacctacacatttggtcacagaagtcttctgtgttgctgattgatctttgtggtgtgagactagaggcaaa--acacaga----gttttctctaca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 34146 187 + 2620224 cctgtgagat------ctatctccaggtagacggtatagtgtcagaactgaattagaggacactcagctggtgtctactgcttggtgtatgtatggaa-gaaaaaacctacacatttggtcacagaagtcttctgtgttgctgattaatctttgtggtgtgagactagaggaaaa--acacaga----gttttctctaca i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2216843 187 + 10629787 cctgtgagat------ctatctccaggtagacggtgtagtgtcagaactgaattagaggacactcagctggtgtctgctgcttggtgtatgtatggaa-gaaaaaacctacacatttggtcacagaagtcttctgtgttgctgattgatctttgtggtgtgagactagaggaaaa--acacaga----gttttctctaca i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24179723 195 + 132174527 cttgtggaatctgacactatctccaggtagaaagtgtagtgtcagaactaaattagaggacactcagctgatgtctgctgcttggtatatgtatggagaaaaaaaacccacatatttggtcacagaag---tctgtgttaccgatcaattgctgtggtgtgagactagaggaata--tcacagagagcgttttctctaca i calJac3.chr10 I 8 C 0 s saiBol1.JH378136 10571160 190 - 21366645 cttgtggaatctgacactatctccaggtagaaagtgtagcatcagaactgaattagaggacactcagctgatgtctgtagcttggtatatatatggag-----aaacctacacatttggtcacagaag---tctgtgttaccaatcaattgctgtggtgtgagactagaggaata--tcacagagagagttttctcTGCA i saiBol1.JH378136 I 352 C 0 s cebCap1.NW_016107324v1 3721982 194 - 13033340 tttgtggaatctgacactatctccaggtagaaagtgtagtgtcagaactgaattagaggacactcagctgatgtctgctgcttggtatatgtatggag-aaaaaaacccacacatttggtcgcagaag---tctgtgttaccaatcgattgttacggtgtgagactagaggaata--tcacagagatagttttctctaca i cebCap1.NW_016107324v1 I 8 C 0 s aotNan1.NW_018501505v1 5211555 193 + 11604778 cttgtggaatctgacactatctccaggtagaaagtgtagtgtcataactgaattagaggacactcagctgatgtctgctgcttgatatatgtatggag--aaaaaacccacatatttggtcacagaaa---tctgtgttactgatcaattgttgtgctgtgagactagaggaata--tcacagagagagttttctctaca i aotNan1.NW_018501505v1 I 8 C 0 e otoGar3.GL873530 122900 0 + 36342412 C e canFam3.chr30 13398353 3275 + 40214260 I e dasNov3.JH579377 1798891 0 - 2868945 C a score=12000.000000 s hg38.chrUn_KI270749v1 3249 1 + 158759 c s panTro5.chr1 101784429 1 - 228573443 c i panTro5.chr1 C 0 C 0 s panPan2.chr15 44363007 1 + 99763055 c i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67493565 1 - 121039945 c i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23401399 1 + 169600520 c i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24005378 1 + 171882078 c i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13250528 1 - 40200012 C i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3238308 1 + 7633303 C i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21939799 1 - 58131712 c i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 34333 1 + 2620224 c i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2217030 1 + 10629787 c i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24179918 1 + 132174527 c i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10571350 1 - 21366645 C i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3722176 1 - 13033340 c i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5211748 1 + 11604778 c i aotNan1.NW_018501505v1 C 0 C 0 s dasNov3.JH579377 1798891 1 - 2868945 C i dasNov3.JH579377 C 0 C 0 e otoGar3.GL873530 122900 0 + 36342412 C e canFam3.chr30 13398353 3275 + 40214260 I a score=2631497.000000 s hg38.chrUn_KI270749v1 3250 273 + 158759 aGCAACTATATAATCTGTGGGAATATCTCCTTTTACACCTAGCCCTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATGTGACCACAGAATCAGATATATACATGAGATTAAATAATACATGTGTATGTCATTTAAATATCCAGAAAAGCTATGACTTCACCAGGTATGAAGAA-TATAAAAAGAACTCTGTCAAGAATCATACAGTAAATAG---ATTTTT------GAATTTAATCTAGTACCTAAACAATCAGAGTAGGGAGGTTAGATAT s panTro5.chr1 101784430 273 - 228573443 aGCAACTATATAATCTGTGGGAATATCTCTTTTTACACCTAGCCCTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATGTGACCACAGAATCAGGTATACAAATGAGATTAAATAATACATGTGTATGTCATTTAAATATCTAGAAAAGTTATGACTTCACCAGGTATGAAGAA-TATAAAAAGAACTTTGTCAAGAATCATACAGTAAATAG---ATTTTT------GAATTTAATCTAGTACCTAAACAATCAGAGTAGGGAGGTTAGATAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44363008 273 + 99763055 aGCAACTATATAATCTGTGGGAACATCTCTTTTTACACCTAGCCCTACATCTGTCTGGCTACAGTCATTTTTCTGGCCTTGGGAAATGTGACCACAGAATCAGATATACACATGAGATTAAATAATAAATTTGTATGTCATTTAAATATCTAGAAAAGTTATGACTTCACCAGGTATGAAGAA-CATAAAAAGAACTCTGTCAAGAGTCATACAGTAAATAG---ATTTTT------GAATTTAATCTAGTACCTAAACAATCAGAGTAGGGAGGTTAGATAT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67493566 273 - 121039945 aGCAACTATATAATCTGTGGGAACATCTCTTTTTACACCTAGCCCTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATGTGACCACAGAATCAGATATACACATGAGATTAAATAATAAATTTGTATGTCATCTAAATATCTAGAAAAGTTATGACTTCACCAGGTATGAAGAA-TATAAAAAGAACTCTGTCAAGAATCATACAGTAAATAG---ATTTTT------GAATTTAATGTAGTACCTAAACAATCAGAGTAGGGAGGTTAGATAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23401400 273 + 169600520 aGCAACTACATAATCTGTGGGAACATCTCTTTTTACACCTAGCCCTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATGTGACCACAGAATCAGATATACACATGAAATTACATAGTAAATTTGCATGTCATTTAAATATCTAGAAAAGTTATAATTTCACCAGGTAAGAAGAA-TATAAAAAGAACTCTGTCAAGAATCATACAGTAAATAG---ATTTTT------GAATTTAATCTAGTACCTAAACAATCAAAGTAGGGAGGTTAGATAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24005379 273 + 171882078 aGCAACTACATAATCTGTGGGAACATCTCTTTTTACACCTAGCCCTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATGTGACCACAGAATCAGATATACACATGAAATTACATAGTAAATTTGCATGTCATTTAAATATCTAGAAAAGTTATAATTTCACCAGGTAAGAAGAA-TATAAAAAGAACTCTGTCAAGAATCATACAGTAAATAG---ATTTTT------GAATTTAATCTAGTACCTAAACAATCAAAGTAGGGAGGTTAGATAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13250529 269 - 40200012 AGCAACTACATAATCTGTGGGAACATCTCTTTTTACACCTAGCCCTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATGTGACCACAGAATCAGATATACACATGAAATTACATAGTAAATTTGCATGTCATTTAAATATCTAGAAAAGTTATAATTTCACCAGGTAAGAAGAA-TATAAAAAGAACTCTGTCAAGAATCATACAGTAAATAG---ATTTTT------GAAGTTAATCTAGTACCTAAA----CAAAGTAGGGAGGTTAGATAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3238309 273 + 7633303 AGCAACTACATAATCTGTGGGAACATCTCTTTTTACACCTAGCCCTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATGTGACCACAGAATCAGATATACACATGACATTACACAATAAATTTGCATGTCATTTAAATATCTAGAAAAGTTATAATTTCACCAGGTAAGAAGAA-TATAAAAAGAACTCTGTCAAGAATCATACAGTAAATAG---ATTTTT------GAATTTAATCTAGTACCTAAACAATCAAAGTAGGGAGGTTAGATAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21939800 273 - 58131712 aGCAACTACATAATCTGTGGGAACATCTCTTTTTACACCTAGCCCTACATCTGTCCTGCTACAGTCATTTGTCTGGCCTTGGGAAATGTGACCACAGAATCAGATACACACATGAGATTACATAGTAAATTTGTATGTCATTTAAATATCTAGAAAAGTTATGATCTTACCAGGTATGAAGAA-TATAAAAAGAACTCTGTCAAGAATCATACAGTAAATGG---ATTTTT------GAATTTAATCGAGTACCTAAATAATCAGAGTAGGGAGATTAGATAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 34334 273 + 2620224 aGCAACTACATAATCTGTGGGAACATCTCTTTTTACACCTAGCCCTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATGTGACCACAGAATCAGATATACACATGAAATTACATAGTAAATTTGCATGTCTTTTAAATATCTAGAAAAGTTATAATTTCACCAGGTAAGAAGAA-TATAAAAAGAACTCTGTCAAGAATCATACAGTAAATAG---ATTTTT------GAATTTAATCTAGTACCTAAACAATCAAAGTAGGGAGGTTAGATAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2217031 273 + 10629787 aACAACTACATAATCTGTGGGAACATCTCTTTTTACACCCAGCCCTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATGTGACCACAGAATCAGATATACACATGAGATTACATAATAAATTTGTATGTCATTTAAATATCTAGAAAAGTTATGATTTCACCAGGTATGAAGAA-CATAAAAAGAACTCTGTCAAGAATCATACAGTAAATAG---ATTTTT------GAATTTGATCTAGTACCTAAACAATCAGAGTAGGGAGGTTAGATAT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24179919 272 + 132174527 aGCAACTATATAATCTGGGGGAACATCTCTTTCTACACCTAGCCCTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATGTAACCACAGAACCAGATAGAGACATGAGA-TAGATAATCAATTTGTATGTTATTTAAATATCTAACAAAGTTATGACTTCACCAGGTATGAAGAA-TATAAAAAGAACTCTGGCAAGAATCATATAATAAATAC---ATTTTC------AAATCTAATCTAGTACCTAAACCATCAGGGTAGGGAGGTTAGATAC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10571351 272 - 21366645 AGCAACTATATAATCTGTGGGAACATCTCTTTTTATACCTAGCCCTACATCTGTCTGGCTACAGTCATTTTTCTGGCCTTGGGAAATATAACCACAGAACCAGATATAGACATGAGA-TAAATAATCAATTTGTATGTTATTTAAATATCTAGAAAAGTTATGACTTCACCAGATATGATGAA-TATAAAAAGAACTCTGGCAAGAATAATATAATAAATAG---ATTTTC------AAATCTAATCTAGTACCTAAACCATCAGGGTAGGGAGGTTAGATAC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3722177 268 - 13033340 aGCAACTATATAATCTGTGGGAACATCTCTTTTTACACCTAGCCTTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATATAACCATAGAACCAGATATAGACATGAG-----ATAATCATTTTGTATGTTATTTAAATATCTAGAAAAGTTATGACTTCACCAGGTATGAAGAA-TATAAAAAGAGCTCTGGAAAGAATCATATAATAAATAG---AATTTT------GAATCTAATCTAGTACCTAAACCATCAGGGTAGGGAGGTTAGATAC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5211749 268 + 11604778 aGCAACTATATAATCTGTGGGAACATCTCCTTTTACACCAAGCCCTACATCTGTCTGGCTACAGTCATTTATCTGGCCTTGGGAAATGTAACCACAGAACCAGATATAGACATGAGA-TAAATAATCAATTTGTATGTCATTTAAATATCTAGACAAGTTATGACTTCAACAGGTATGAAGAA-AATAAAAAGAACTCTGGCAAGAATCATATAATAGAT-------TTTT------GAATCTAATCTAGTACCTAAACCATCAGGGTAGGGAGGTTAGATAG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 122900 251 + 36342412 TGCAAC-----GATCTGTGGGAATATCTCTCTTCACAACCAG-------------------CAGTC-CTGATTTGGCCTTGGGAACTGTGAGCACAGAGCTAGATTTAGACATGGCA-GGAAGAATCCAGTTGTATGTCATTTTTTATCTTAGAAAACTTATGACTTCATCAGGTAGAAAGAATTAGAAAAAGGACTCTGACACAAATCATACAATAAATAGTTATTTTTT------TAATAAAATCTGGTGCTTAAATAGTTTGGGTAGAAAAGATAGGTAT i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1798892 264 - 2868945 AGGAACTTTCTAACCTCTGGGTACATCTCTTTTTATAGGCAG-----------TCTGGTTTCAGTCATTACTCCAGCCTTAGAAACTGTGAGCACTGAGCTGGACATCGACATGAGAT---AGAGTCCATTTGTATGACATTTAAATATCCGGAAAAGCTATGACCTCACCATATAGGAGGGA-TATAAAAAGGAAACCGACTAATAACA-ACAATAAGTAG---ATTTTTTTTAAAAAATCCAATATAGTGCTCAAATAACCCAGATAGGAATGTTGCATAT i dasNov3.JH579377 C 0 I 1493 e canFam3.chr30 13398353 3275 + 40214260 I a score=137258.000000 s hg38.chrUn_KI270749v1 3523 12 + 158759 TAAAATCAGGCT s panTro5.chr1 101784703 12 - 228573443 TAAAATCAGGCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44363281 12 + 99763055 TAAAATCAGGCT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67493839 12 - 121039945 TAAAATCAGGCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23401673 12 + 169600520 TAAAATCAGGCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24005652 12 + 171882078 TAAAATCAGGCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13250798 12 - 40200012 TAAAATCAGGCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3238582 12 + 7633303 TAAAATCAGGCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21940073 12 - 58131712 TAAAACCAGGCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 34607 12 + 2620224 TAAAATCAGGCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2217304 12 + 10629787 TAAAATCAGGCT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24180191 12 + 132174527 TAAAATCAGGCT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10571623 12 - 21366645 TAAAATCCAGCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3722445 12 - 13033340 TAAAATCAGGCT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5212017 12 + 11604778 TAAAATCAGGCT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 123151 12 + 36342412 TAAAATCAGTTT i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1800649 12 - 2868945 taaaatCATGCT i dasNov3.JH579377 I 1493 C 0 e canFam3.chr30 13398353 3275 + 40214260 I a score=1065002.000000 s hg38.chrUn_KI270749v1 3535 118 + 158759 AAAGAT-GTAGGCAACATGGATCTAGAAAAC--GGATTGCATGGCCATTTCACTTAGAGTTCATGGGCTTGGA----ATCTCTATTAACATAACTTTTACAATGTTAGAATTTGTTCCCATATTA s panTro5.chr1 101784715 120 - 228573443 AAAGAT-GTAGGCAACATGGATCTAGAAAACATGGATTGCATGGCCATTTCACTTAGAGTTCATGGGCTTGGA----ATCTCTATTAACATAAATTTTACAAGGTTAGAACTTGTTCCCATATTA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44363293 120 + 99763055 AAAGAA-ATAGGCAACATGGATCTAGAAAACATGGATTGCATGGCCATCTTGCTTAGAGTTTATGGGCTTGGA----ATCTCTATTAACATAACTTTTACAACTTTAGAATTTGTTCTCATATTA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67493851 120 - 121039945 AAAGAA-ATAGGCAACATGGATCTAGAAAACGTGGATTGCATGGCCATCTCACTTAGAGTTCATGGGCTTGGA----ATCTCTATTAACATAACTTTTACAACGTTAGAATTTGTTCCCATATTA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23401685 121 + 169600520 AAAGATAAGAGACAACATGGATCTGGAAAATATGAATTGCATGGCCATCTCACTTAGAGTTCACAGGCTTGGG----ATCTCTATTAACATAACTTTTATGACGTTAGAACTTGTTCCCATATTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24005664 121 + 171882078 AAAGATAAGAGACAACATGGATCTGGAAAATATGAATTGCATGGCCATCTCACTTAGAGTTCACAGGCTTGGG----ATCTCTATTAACATAACTTTTATGACGTTAGAACTTGTTCCCATATTA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13250810 121 - 40200012 AAAGATAAGAGACAACATGGATCTGGAAAATATGAATTGCATGGCCATCTCACTTAGAGTTCACAGGCTTGGG----ATCTCTATTAACATAACTTTTACGACGTTAGAACTTGTTTCCATATTA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3238594 120 + 7633303 AAAGAT-AGAGACAACATGGATCTGGAAAATATGAATTGCATGGCCATCTCACTTAGAGTTCACAGGCTTGGG----ATCTCTATTAACACAACTTTTACGACGTTAGAACTTGTTCCCATATTA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21940085 120 - 58131712 AAAGAT-AGAGACAACATGGATCTGGAAAATATGAATTGCATGGCCATCTCACTTAGAGTTCACGGGCTTGGG----ATCTCTATTAGCGTAACTTTTACGACGTTAGAACTTGTTCCCATATTA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 34619 120 + 2620224 AAAGAT-AGAGACAACATGGATCTGGAAAATATGAATTGCATGGCCATCTCACTTAGAGTTCACAGGCTTGGG----ATCTCTATTAACAGAACTTTTACGACGTTAGAACTTGTTCCCATATTA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2217316 120 + 10629787 AAAGAT-ATAGACAACATGGATCTGGAAAACATGGATTGCGTGGCCATCTCACTTAGAGTTCACGAGCTTGGG----ATCTCTATTAACATAACTTTTACGACGTTAGAACTTATTCCCATATTA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24180203 120 + 132174527 AAAGAT-ATAGGCAACACGGATCTAGCAAACATGGATTGCATGGCTGCTTCATTTAGAGTTCATGGACTTGGA----ATCTCTATTAATGTAACTTTTACAACGTTAGAATTTGTTCCCATATTA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10571635 120 - 21366645 AAAGAT-ATAGGCAACATGGATCTAGCAAACATGGATTGCATGGCTGCTTCATTTAGAGTTCACAGACTTGGA----ATCTCTATAAACATAACTTTTACAAGGTTAGAATTTGTTCCCATATTA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3722457 120 - 13033340 AAAGAT-ATAGGCAACAGGGATCTAGCAAACATGGATTGCATGGCTGCTTCATTTAGAGTTCACGGACTTGGA----ATCTCTATTAACATAACTTTTACAACGTTAGAATTTGTTCACACATTA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5212029 120 + 11604778 AAAGAT-ATAGGCAACATGGATCTAGCAAACATGGATTGCATGGCTGCTTCCTTTAGAGTTCATAGACTTGGA----ATCTCTATTAACATAACTTTCACAACATTAGAATTTGTTCCCATAATA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 123163 99 + 36342412 AACGAT-ATAGAAAGCAT-GATCTAGAGAATAAGGAACTCATTTTTACATCATGTAGAGTTTGTGAAC---------AACTCT--------AATTT-------GTCCCAATTTGTCTTCATATTA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13401628 115 + 40214260 AAAGGT-ATAAGTAAGGTG---------AATATGAATTTCACACCTATTTCATTTAGAGTTCATGGACTGGGAGTTTATATTTATTATCATAACTCTATAAAAGTGCCAACTAGTCCATCTATTA i canFam3.chr30 I 3275 I 400 s dasNov3.JH579377 1800661 107 - 2868945 AAAGGT-ATAGATAATGTGAATCTT-------TGGCTTG-GTGCCCACATAATTTAAAACTCATGATCTTGGA----GTATCTCTT-----CATTAGTATAAGAGCCCAACTTGTTCATCATTTA i dasNov3.JH579377 C 0 C 0 a score=46824.000000 s hg38.chrUn_KI270749v1 3653 4 + 158759 ATGA s panTro5.chr1 101784835 4 - 228573443 ATGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44363413 4 + 99763055 ATGA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67493971 4 - 121039945 ATGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23401806 4 + 169600520 ATGA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24005785 4 + 171882078 ATGA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13250931 4 - 40200012 ATGA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3238714 4 + 7633303 ATGA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21940205 4 - 58131712 ATGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 34739 4 + 2620224 ATGA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2217436 4 + 10629787 ATGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24180323 4 + 132174527 ATGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10571755 4 - 21366645 ATGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3722577 4 - 13033340 ATGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5212149 4 + 11604778 ATGA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 123262 4 + 36342412 ATGG i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1800768 4 - 2868945 GTGA i dasNov3.JH579377 C 0 C 0 e canFam3.chr30 13401743 400 + 40214260 I a score=37065.000000 s hg38.chrUn_KI270749v1 3657 3 + 158759 GGG s panTro5.chr1 101784839 3 - 228573443 GGG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44363417 3 + 99763055 GGG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67493975 3 - 121039945 GGG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23401810 3 + 169600520 GGG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24005789 3 + 171882078 GGG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13250935 3 - 40200012 GGG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3238718 3 + 7633303 GGG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21940209 3 - 58131712 GGG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 34743 3 + 2620224 GGG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2217440 3 + 10629787 GGG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24180327 3 + 132174527 GGG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10571759 3 - 21366645 GGG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3722581 3 - 13033340 GGG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5212153 3 + 11604778 GGG i aotNan1.NW_018501505v1 C 0 C 0 s tarSyr2.KE933570v1 42957 2 - 145891 -GG i tarSyr2.KE933570v1 N 0 N 0 s otoGar3.GL873530 123266 3 + 36342412 AGG i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1800772 1 - 2868945 --G i dasNov3.JH579377 C 0 C 0 e canFam3.chr30 13401743 400 + 40214260 I a score=20986.000000 s hg38.chrUn_KI270749v1 3660 2 + 158759 AA s panTro5.chr1 101784842 2 - 228573443 AA i panTro5.chr1 C 0 I 4 s panPan2.chr15 44363420 2 + 99763055 GA i panPan2.chr15 C 0 I 4 s nomLeu3.chr6 67493978 2 - 121039945 AA i nomLeu3.chr6 C 0 I 4 s rheMac8.chr7 23401813 2 + 169600520 AA i rheMac8.chr7 C 0 I 4 s macFas5.chr7 24005792 2 + 171882078 AA i macFas5.chr7 C 0 I 4 s macNem1.NW_012010577v1 13250938 2 - 40200012 AA i macNem1.NW_012010577v1 C 0 I 4 s cerAty1.NW_012000887v1 3238721 2 + 7633303 AA i cerAty1.NW_012000887v1 C 0 I 4 s chlSab2.chr26 21940212 2 - 58131712 AA i chlSab2.chr26 C 0 I 4 s manLeu1.NW_012108674v1 34746 2 + 2620224 AA i manLeu1.NW_012108674v1 C 0 I 4 s colAng1.NW_012121598v1 2217443 2 + 10629787 AA i colAng1.NW_012121598v1 C 0 I 4 s calJac3.chr10 24180330 2 + 132174527 AA i calJac3.chr10 C 0 I 4 s saiBol1.JH378136 10571762 2 - 21366645 AA i saiBol1.JH378136 C 0 I 4 s cebCap1.NW_016107324v1 3722584 2 - 13033340 AA i cebCap1.NW_016107324v1 C 0 I 4 s aotNan1.NW_018501505v1 5212156 2 + 11604778 AA i aotNan1.NW_018501505v1 C 0 I 3 s otoGar3.GL873530 123269 1 + 36342412 -A i otoGar3.GL873530 C 0 I 4 s dasNov3.JH579377 1800773 2 - 2868945 AA i dasNov3.JH579377 C 0 C 0 e canFam3.chr30 13401743 400 + 40214260 I a score=1462175.000000 s hg38.chrUn_KI270749v1 3662 147 + 158759 AAACAATTACCCTGAG-TATCTGAAGCTCCAAATCTCATTTTCCAGTCAAAATCTCTGATAGGTAAACAACCTGAAAAAGTTGCCACAACTCAC-TGAGGTGATAACCTCA-TTTGCTTAAGAGAATGTAATTGTTTTTATGA-----Ttttttt s panTro5.chr1 101784848 147 - 228573443 AAACAATTACCCTGAG-TATCTGAGGCTCCAGATCTCATTTTCCAGTCAAAATCTCTGATAGGTAAACAACCTGAAAAAGTAGCCACAACTCAC-TGAGGTGATAACCCCA-TTTGCTTAAGAGAATGTAATTGTTTTTATGA-----TTTTTTT i panTro5.chr1 I 4 I 283 s panPan2.chr15 44363426 147 + 99763055 AAACAATTACCCTGAG-TATCTGAAGCTCCAGATCTCATTTTCCAGTCAAAATCTCTGATAGGTAAACAACCTGAAAAAGTAGCCACAACTCAC-TGAGGTGATAACCCCA-TTTGCTTAAGAGAATGTAATTGTTTTTATGA-----Ttttttt i panPan2.chr15 I 4 C 0 s nomLeu3.chr6 67493984 146 - 121039945 AAACAATTACCCTGAG-TATCTGAAGCTCCAGATCTCATTTTCCAGTCAAAGTCTCTGATAGGTAAACAACCTGAAAAAGTAGCCACAACTCAC-TGAGCTGATAACCCCA-TTTGCTTAAGAGAATGTAATTGCTTTTATGA-----TTATTT- i nomLeu3.chr6 I 4 C 0 s rheMac8.chr7 23401819 146 + 169600520 AAACAATTACCCTGAG-TATCTGAAGCTCCAGATC-CATTTTCCAGTCAAAATCTCTGATAGGTAAACAATCTGAAAGAGTAGCCACAACTCTC-TGAGGTGATAACCCCA-TTTGCTTAACAGAATGTAATTGTTTTTATGA-----TTttttt i rheMac8.chr7 I 4 I 1 s macFas5.chr7 24005798 146 + 171882078 AAACAATTACCCTGAG-TATCTGAAGCTCCAGATC-CATTTTCCAGTCAAAATCTCTGATAGGTAAACAATCTGAAAGAGTAGCCACAACTCTC-TGAGGTGATAACCCCA-TTTGCTTAACAGAATGTAATTGTTTTTATGA-----TTttttt i macFas5.chr7 I 4 I 1 s macNem1.NW_012010577v1 13250944 147 - 40200012 AAACAATTACCCTGAG-TATCTGAAGTTCCAGATC-CATTTTCCAGTCAAAATCTCTGATAGGTAAACAATCTGAAAGAGTAGCCACAACTCTC-TGAGGTGATAACCCCA-TTTGCTTAACAGAATGTAATTGTTTTTATGA----TTTttttt i macNem1.NW_012010577v1 I 4 I 1 s cerAty1.NW_012000887v1 3238727 149 + 7633303 AAACAATTACCCTGAG-TATCTGAAGCTCCAGATC-CATTTTCCAGTCAAAATCTCTGATAGGTAAACAATCTGAAAGAGTAGCCACAACTCTC-TGAGGTGATAACCCCA-TTTGCTTAACAGAATGTAATTGTTTTTATGA--TTTTTTTTTT i cerAty1.NW_012000887v1 I 4 I 1 s chlSab2.chr26 21940218 147 - 58131712 AAACAATTACCCTGAGTTATCTGAAGGTCCAGATC-CATTTTCTAGTCAAAATCTCTGATAGGTAAACAATCTGAAAAAGTAGCCACAACTCTC-TGAGGTGATAACCCCA-TTTGCTTAAGAGAACGTAATTGTTTTTATGA-----TTttttt i chlSab2.chr26 I 4 I 1 s manLeu1.NW_012108674v1 34752 147 + 2620224 AAACAATTACCCTGAG-TATCTGAAGCTCCAGATC-CATTTTCCAGTCAAAATCTCTGATAGGTAAACAATCTGAAAGAGTAGCCACAACTCTC-TGAGGTGATAACCCCA-TTTGCTTAACAGAATGTAATTGTTTTTATGA----TTTTTTTT i manLeu1.NW_012108674v1 I 4 I 1 s colAng1.NW_012121598v1 2217449 146 + 10629787 AAACAATTACCCTGAG-TATCTGAAGCTCCAGATC-CATTTTCCAGTCAAAATCTCTGATAGGTAAACAATCTGAAAAATCAGCCACAACTCTT-TGGGGTGATAAGCCCA-TTTGCTTAAGAGAacgtaattgtttttatga-----ttttttt i colAng1.NW_012121598v1 I 4 I 1 s calJac3.chr10 24180336 144 + 132174527 AAACAATTACCCTGAG-TATCTGAAGCTCCTGATCTCATTTTCCAATCAAAATCTCCGATAGGTAAACAACCTGAAAATGTAACCACAACTTAC-TGGGGTGATAA-CCCA-TTTGCGTAAGAGAACGTAATTGTTTTTATGA-----GGTTT-- i calJac3.chr10 I 4 C 0 s saiBol1.JH378136 10571768 145 - 21366645 AAACAATTACCCTGAG-TATCTGAAGCTCCTGATCTCATTTTCCAATCAAAATCTCTGATAGGCAAACAACCTGAAAAAGTAGCCACAACTTAT-TGGGGTGATAACCCCA-TTTGCTTAAGAGAACGTAATTGTTTTTATGA-----GGttt-- i saiBol1.JH378136 I 4 C 0 s cebCap1.NW_016107324v1 3722590 145 - 13033340 AAACAATTACCCTGAG-TATCTGAAGCTCCTGATCTCATTTTCCAATCAAAATCTCTGATAGGTAAACAACCTGAAAAAGTAGGCACAACTTAC-TGGGGTGATAACCCCA-TTTGCTTAAGAGAACGTAATTGTTTTTATGA-----GGTTT-- i cebCap1.NW_016107324v1 I 4 C 0 s aotNan1.NW_018501505v1 5212161 141 + 11604778 ---CAATTACCCTGAG-TATCTGAAGCTCCTGATTTCATTTTCCAATCAAAATCTCTGATAGGTAAACAACCTGAAAAAGTA-CCCCAACTTAG-TGGGGTGATAACCCTA-TTTGCTTAAGAGAacataattgtttttatga-----ggttt-- i aotNan1.NW_018501505v1 I 3 C 0 s otoGar3.GL873530 123274 145 + 36342412 ATCCAATTACTCTGAG-TATTTGCAGTTTCAGATCTCATTTTCTGATCAAAATTTCTGATAGGTAATCAACCTGAGAAAGTAGCCACAATTTACTTGCATTGATAACCTTG-TTTGCTTAACATAAT-TAGTTGC--TCACTA-----TCTTCCC i otoGar3.GL873530 I 4 I 3 s canFam3.chr30 13402143 152 + 40214260 AAAAAATCACCCTGAA-TACCTGTGGATCTAGAGCTCCTCTTCCAACCAAAATGTATGTCAAGTAAAAAA-CTGAGAAAGTAGCTACAGTTCACTTGGACTGATAACCTCA-TTTGCTTAAGAGAGCACAATCATTTTCAAGGCATCTTTTTTTT i canFam3.chr30 I 400 I 9 s dasNov3.JH579377 1800775 136 - 2868945 AAAC-------------AACCTGCAACATCAGATCTCAGATTCCATCCAAAATCTCTGGTAAATAATAAATCTGAGAAGGTAGCCCAATACCCT-TGGATTGATAACTCCATTTTGCTTAAGAGAATGTAATTCTGCTCATGa-----ttttttt i dasNov3.JH579377 C 0 C 0 a score=763790.000000 s hg38.chrUn_KI270749v1 3809 77 + 158759 ---tatc--ccaggaaaaca-----ttgaaa------aaaagtttagagatgatg------aagtatatgaaaactataacatttatactttagagatg s panTro5.chr1 101785278 77 - 228573443 ---tatc--ccagGAAAACA-----TTGAAA------AAAAGTTTAGAGATGATG------AAGTATAGGAAAACTATAATATTTATACTTTAGAGACG i panTro5.chr1 I 283 C 0 s panPan2.chr15 44363573 75 + 99763055 ----atc--ccagggaaaca-----ttgaaa------aaaag-tgagagatgatg------aaatatatgaaaactataatatttatactttggagatg i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67494130 77 - 121039945 ---TATC--CCAGGGAAACA-----TTGAAA------AAAAGTTTAGAGATGATG------AAGTATATGAAAACTATAATATTTATACTTTAGAGATG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23401966 77 + 169600520 ---tatc--ccaggaaaacc-----ttgaaa------aaaagtttagagatgatg------aagtatatgaaaactataacatttatactttagagatg i rheMac8.chr7 I 1 C 0 s macFas5.chr7 24005945 77 + 171882078 ---tatc--ccaggaaaacc-----ttgaaa------aaaagtttagagatgatg------aagtatatgaaaactataacatttatactttagagatg i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 13251092 77 - 40200012 ---tatc--ccaggaaaacc-----ttgaaa------aaaagtttagagatgatg------aagtatatgaaaactataacatttatactttagagatg i macNem1.NW_012010577v1 I 1 C 0 s cerAty1.NW_012000887v1 3238877 77 + 7633303 ---TATC--CCAGGAAAACC-----TTGAAA------AAAAGTTTAGAGATGATG------AAGTATATGAAAACTATAACATTTATACTTTAGAGATG i cerAty1.NW_012000887v1 I 1 C 0 s chlSab2.chr26 21940366 77 - 58131712 ---aatc--ccaggaaaacc-----ttgaaa------aaaagtttagagatgatg------aagtctatgaaaactataacatttatactttagagatg i chlSab2.chr26 I 1 C 0 s manLeu1.NW_012108674v1 34900 77 + 2620224 ---TATC--CCAGGAAAACC-----TTGAAA------AAAAGTTTAGAGATGATG------AAGTATATGAAAACTATAACatttatactttggagatg i manLeu1.NW_012108674v1 I 1 C 0 s colAng1.NW_012121598v1 2217596 77 + 10629787 ---aatc--ccaggaaaacc-----ttgaaa------aaaagtttagagatgatg------aagtatatgaaaactataacatttatactttagagatg i colAng1.NW_012121598v1 I 1 C 0 s calJac3.chr10 24180480 77 + 132174527 ---TATC--CCAAGAAAATA-----TTAAAA------AAAAGGTTAGAAATCATG------AAGTATATGAAAACTATAATATTTACACTTTAGAGATA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10571913 77 - 21366645 ---tatc--caaagaaaata-----ttgaaa------aaaaggttagaaatgatg------aagtatatgaaaactataatatttatacttcagagatg i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3722735 77 - 13033340 ---TATC--CAAAGAAAATA-----TTGAAA------AAAGGGTtagaaatgact------aagtatatgaaaactataatatttatactttagagatg i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5212302 77 + 11604778 ---tatc--ccaagaaaata-----ttgaaa------aaaaggttagaaatgatg------aagtatatgaacactataatatttatactttagagatg i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 123422 74 + 36342412 ---TACCCTCTGTGGAATCT-----TTTAAA------TAAAGAATAGAGATGATG------AAGTATATAAAAACTAGAATATTCACTTTTTAG----- i otoGar3.GL873530 I 3 C 0 s canFam3.chr30 13402304 88 + 40214260 ---TAAC--CTGGGAAACCATTTTTTTTTTT------TTAAGTACAGAGATGATGTAAATAAAAACTATAAAAACTATAATATTCATATTTTAGAGATG i canFam3.chr30 I 9 I 1369 s dasNov3.JH579377 1800911 86 - 2868945 aattaaa--aaaaaaaaata-----gggaaactttttaaaagtatagagatgatg------aagtaaatcaaaactacattattaatattttacagatg i dasNov3.JH579377 C 0 C 0 a score=2751461.000000 s hg38.chrUn_KI270749v1 3886 301 + 158759 tgatatttatttataattg-----tattagtatttaaa----tatagattagcattttacattccaattttcaatgtgtaacag----aatattttagatattggggtttttttttagttgaaattataagcggt---------tttaccgagttgccagtagtggttt-aacattgaagataatttaagattcatgattttgtgggtttaatttattagctctataagggttgtttaagtactct-gaaggctttatttgttagtccgataattaaaatgttcataaagataattcaacatattaaatttgtaaatgtagttta s panTro5.chr1 101785355 299 - 228573443 TGATATTTATTTATAATTG-----TATTAGTATTTAAA----Tatagattagcattttacattccaattttaaatgtgtaacag----aatattttagatattggggttttttt--agttgaaattataagtggt---------tttaccgagttgccagtagtggttt-aacattgaagataatttaagattcatgattttgtgagtttaatttattagctctataagggttgtttaagtactct-gaaggctttatttgttagtctgataactaaaatcttcacaaagataattcaacatattaaatttataaatgtagttta i panTro5.chr1 C 0 C 0 s panPan2.chr15 44363648 304 + 99763055 tgatatttattcataattgtattatattagtatttaaa----tatagattagcattttacattccaattttaaatgtgtaacag----aataatttagatattgg---tttttttgagttgaaattataagcggt---------tttaccatgttgccagtagtggttt-aacatttaagataatttaagattcaggattttgtgagtttaatttattagctctataagggttgtttaagtactctggaaggttttatttgttagtcctataattaaaatgttcacaaagataattgaacctattaaatttataaatgtagttta i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67494207 301 - 121039945 TGATATTTATTCATAATTG-----TATTAGTATTTAAA----Tatagattagcattttacattccaattttaaatgtgtaacag----aataatttagatatttt-tttttttttgagttgcaattataagcggt---------tttaccgagttgccagtagtggttt-aacatttaagaaaatttaagattcatgattttgtgagtttaatttattagctctatgagggttgtttaagtactctggaaggttttatttgttagtccgataattaaaatgttcacaaagataattgaacatattaaatttataaacgtagttta i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23402043 299 + 169600520 tgatatttattcataattg-----tatttgtatttaac----tatagatttgcattttacattccaattttaaatgtataacag----aatattttagatactgg--ttttcttttagttgaaattataagcggt---------tttaccgagttgccagcagtggttt-aaccttcaagataatttaagattcatgattttgtaagtttaatttattagctctataagggttgtttaagtactctggaaggttttatttgttagtccgataattaaaatgttcacaaagataattgaacatattaaatttataaatgtag-tta i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24006022 299 + 171882078 tgatatttattcataattg-----tatttgtatttaac----tatagatttgcattttacattccaattttaaatgtataacag----aatattttagatactgg--ttttcttttagttgaaattataagcggt---------tttaccgagttgccagcagtggttt-aaccttcaagataatttaagattcatgattttgtaagtttaatttattagctctataagggttgtttaagtactctggaaggttttatttgttagtccggtaattaaaatgttcacaaagataattgaacatattaaatttataaatgtag-tta i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13251169 303 - 40200012 tgatatttattcataattg-----tatttgtatttaactatttatagatttgcattttacattccaattttaaatgtataacag----aatattttagatactgg--ttttcttttagttgaaattataagtggt---------tttaccgagttgccagcagtggttt-aaccttcaagataatttaagattcatgattttgtaagtttaatttattagctctataagggttgtttaagtactctggaaggttttatttgttagtccgataattaaaatgttcacaaagataattgaacatattaaatttataaatgtag-ata i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3238954 303 + 7633303 TGATATTTATTCATAATTG-----TATTTGTATTTAACTATTTatagatttgcattttacattccaattttaaatgtataacag----aatattttagatactgg--ttttcttttagttgaaattataagcggt---------tttaccgagttgccagcagtggttt-aaccttcaagataatttaagattcatgattctgtaagtttaatttattagctctataagggttgtttaagtactctggaaggttttatttgttagtctgataattaaaatgttcacaaagataattgaacatattaaatttataaatgtag-tta i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21940443 301 - 58131712 tgatatttattcataattg-----tatttgtatttaaatatttatagattagcattttacattccaactttaaatgcataacag----aatattttaaatactgg--ttttcttttagttgaaattataagcggt---------tttaccgagttgccagcagtagtttaaacctgtgagataatttaagattcatgattttgtaagtttaatttattagctctataagggttgtttaagtactttggaaggt----tttgttagtctgataattaaaatgttcacaaagataattgaacatattaaatttataaatgtagttta i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 34977 303 + 2620224 tgatatttattcataattg-----tatttgtatttAACTATTTatagatttgcattttacattccaattttaaatgtataacag----aatattttagatactgg--ttttcttttagttgaaattataagcggt---------tttaccaagttgccagcagtggttt-aaccttcaagataatttaagattcatgattttgtaagtttaatttattagctctataagggttgtttaagtactctggaaggttttatttgttagtccgataattaaaatgttcacaaagataattgaacatattaaatttataaatgtag-tta i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2217673 304 + 10629787 tgatatttattcataattg-----tatttgtatttaaatatttatagattagcattttacattccaattttaaatgtataacag----aatattttagatactgg--ttttcttttagttgaaattataagtgat---------tttaccgagttgccagcagtggttt-aacctttaagataatttaagattcatgattttgtaagtttaatttattagctctataagggttgtttaagtattctggaaggttttatttgttagtccgataattaaaatgttcacaaagataattgaacacattaaatttataaatgtagttta i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24180557 295 + 132174527 TTATATTTATGCATAATTG-----CATAAGTATTTAAATATTTATAGATTAGCATTTTACATTCTAATTTGAAATGTGTAACAG----AATATTTTAGATT------TTTTTTTT-AGTTGAAATTTTAAGTGGT---------TTTACTGAGTTGCCAGTAGTGGTTT-AACATTTAAGATAATGTAAGATTCATGGTTTTGTGAGTTCAATTTATTAGCTCTATAAGGG----TTAAGTACTCTGGAAGGTTTTGTTTGTTAGTCTGATAATTAAAATGTTCACAAAGATAATTGAACATATTAAATTTATAAATGTAGTTTA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10571990 296 - 21366645 ttatatttatccataattg-----cataagtatttaaatatttatagattagcattttacattctaatttgaaatgtgtaacaa----aatattttagatt------ttttttttgagttgaaattttaagtggt---------tttactgagttgccagtagtggttt-aacatttaagataatctaagattcatgattttgtgagttcaatttattaactctataagga----ttaagtactctggaaggttttgtttgttagtctgattattaaaatgttcacaaagataagtgaacatattaaatttataaatgtagttta i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3722812 296 - 13033340 ttatatttatccataattg-----catgagtatttaaatatttatagattagcattttacattctaatttgaaatgtgtaacag----aatattttagatt------ttttttttgagttgaaattttaagtggt---------tttactgagttgccagtagtggttt-aacattgaaggtaatctaagattcatgattttgtgagttcagtttattagctctataaggg----ttaagtactctggaaggttttgtttgttagtctgataattaaaatgttcacaaagataactgaacatattaaatttataaatgtagttta i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5212379 294 + 11604778 ttatatttatccataattg-----cataagtatttaaatatttatacattagcattttacattctaatttgaaatgtgtaacag----aatattttaga--------ttttttttgagttgaaattttaagtggt---------tttactgagttgccagtagtggttt-aacatttaagataatgtaagattcatgattttgtgagttcaatttattagctctataaggg----ttaagtactctggaaggttttgtttgttagtctgataattaaaatgttcacaaagataattgaacatattaaatttataaatgtaggtta i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 123496 238 + 36342412 TGATGTTTATTTATTATCG----GTATTAGTATTTAAATGTTTATAGATGAGCATTTTA-------------AATGGTCAACTC----TGTAGTTTAGGCTAGTG--------------CAAAAGTATAACTGGT-------------------------CAGTGGTTT-aacatttcacataacttaagattcatgattctgtaagt----tttattagctttagaagtt----ttaagtactct--------------gttagtcaaataattgaagtgttcccaaagataattaaacatagtaaatttataaatgcag---- i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1800997 302 - 2868945 ttatatttattcataattt----------------aaatttttacagactaacactttaaattccaattttaagtgtgtacctgattaattattttaggcatt----ttgtttttcaggttaaagtataagaggttaagaggtttttagtaagttgccattagtggttt-aacatttaagataatttaagatttaccattttatta-cttgatttattaactttataagaattgtttaagtactttggaaggttttgtttgttagttagatt-ttaaagtattcacaaagataactgagaattttaaatttgtaaatgaagttaa i dasNov3.JH579377 C 0 C 0 e canFam3.chr30 13402392 1369 + 40214260 I a score=3599606.000000 s hg38.chrUn_KI270749v1 4187 414 + 158759 aaatctttaagggagtttaattaactaagttgtaaatggac-caaacattaatcaaagtcccccttaaaaa-taatttt---taatgtactagatttataaatagaacaac----------------------------aagatttctaatttaaactc-aaaaatttTTTAAATTGGTTAACAA-TTTAACATAATATGCTGCACATTAATTCAGAATA-TGAAATC--TTATATGTAGTTCTTTTTACATTCAAGAATCACATCGA-TAAACATCACAAAATGACTACTGGTAACCACTATGAAACTCTTTAAGCGGTAGGTCC-----TGT-ATGAATTTTACTCCTC--ATGATTTGA--AGATTATGCATAAAT------------------------------------------------------------TCCTTCTTCTTGTTATTTTGTTTC-------------------------CAATTT--AGTCTTTacatagaca------------attcaatgtagtcttt--------------------------------------------------acatagacaaaactcctataac s panTro5.chr1 101785654 413 - 228573443 aaatctttaagggagtttaattaactaagttgtaaatggac-caaacattaatcaaagtcccccttaaaaa-taatttt---taatgtactagatttataaatagaacaat----------------------------aagatttctaatttaaactc-aaaaatttTTTAAATTGGTTAACAA-TTTAACATAATATGCTGCACATTAATTCAGTGTA-TGAAACC--TAAAAAGTAGTCCTTTTTACATTCAA-AATCACATTGA-TAAACATCACAAAATGCCCACTGGTAACCACTATGAAACTCTTTAAGCCATAGGTCT-----TGT-ATGAATTTTGCTCCTC--ATGATTTGA--AGATTATGCATAAAT------------------------------------------------------------TCCTTCTTCTTCTTATTTTGTTTC-------------------------CAATTT--AGTCTTTACATAcaca------------attcaatttagtcttt--------------------------------------------------acatagacaaaactcctataac i panTro5.chr1 C 0 C 0 s panPan2.chr15 44363952 401 + 99763055 aaatctttaagggagtttaattaactaagttgtaaatggaagcaaacattaatcaaagtcccccttaaaaa-taatttt---tattgtactagatttatgaatagaataat----------------------------aagatttctaatttgaactc-aaaaatttTTTAAATTGGTTAAATA-TTTAACATAAGATGCTGCACATTAATTCAAAATA-TGAAATC--TTGTAAATAGTTCTTTTTACATTCAAGAATCACATTG---------------ATGCCCACTGGTAACCACTATGAAACTCTTTAAGCGATAGGTCC-----TGT-ATGAATTTTACTCCTC--ATGATTTGA--AGATTATGCATAAAT------------------------------------------------------------TCCTTCTTCTTGTTATTTTGTTTC-------------------------CAATTT--AGTGTTTacatagaca------------attcaattttgtcttt--------------------------------------------------acatagacaaaactcctataac i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67494508 414 - 121039945 aaatctttaagggagtttaattaactaagtcgtaaatggaagcaaacattaatc-aagtcccccttaaaaa-taatttt---aaatgtactagatttataaatagaacaat----------------------------aagatttttaatttaaactc-aaaaa-tttttaaattggttaaaaattttgacataatatgctgcacattaattcaaaata-cgaaatc--ttataaatagtcctttttacattcaagaatcacattga-taaacatcacaaaatgcccactgGTAACCACTATGAAACTCTTTAAGCGATAGGTCT-----TGT-ATGAATTTTACTCCTC--ATGATTTGA--AGATTATGCATAAAT------------------------------------------------------------TCCTTCTTCTTGTTATTTTGTTTC-------------------------CAATTT--AGTCTTTacatagaca------------attcaatttagtcttt--------------------------------------------------acatagacaaaactcctataac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23402342 402 + 169600520 aaatctttaagggagtttaattaactaagttgtaaatggaagcaagcattattcaaagtcccccttaaaaa-taatttt---aaatgtgctagatttataaatagaacaat----------------------------aagatttctaatttaaactc-aaaattttaaAATATTGGTTAAAAAATTTA--------------ACATTAATTCAAAATA-TGAAATC--TTGTAAATAGTGCTTTTTACATTCAAGAATCACACTAA-TGAACATCACAAAATGCCCGCTGATAACCGCTATGAAACTCTTTAAGCAACAGGTTC-----TGT-ATGAATTTTACTCCTC--ATGATTTGA--AGATTATGCATTAAT------------------------------------------------------------TTCTTGTTCCTGTTATTTTCTTTC-------------------------CAATTT--AGTCTTTACATAcaca------------attcaatttagtcttt--------------------------------------------------acatagacaaaactcctataaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24006321 402 + 171882078 aaatctttaagggagtttaattaactaagttgtaaatggaagcaaacattattcaaagtcccccttaaaaa-taatttt---aaatgtgctagatttataaatagaacaat----------------------------aagatttctaatttaaactc-aaaattttaaaatattggttaaaaaattta--------------acattaattcaaaata-tgaaatc--ttgtaaatagtgctttttacattcaagaatcacactaa-tgaacatcacaaaatgcccgctgataACCGCTATGAAACTCTTTAAGCAACAGGTTC-----TGT-ATGAATTTTACTCCTC--ATGATTTGA--AGATTATGCATTAAT------------------------------------------------------------TTCTTGTTCCTGTTATTTTCTTTC-------------------------CAATTT--AGTCTTTACATAcaca------------attcaatttagtcttt--------------------------------------------------acatagacaaaactcctataaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13251472 402 - 40200012 aaatctttaagggagtttaattaactaagttgtaaatggaagcaaacattattcaaagtcccccttaaaaa-taatttt---aaatgtgctagatttataaatagaacaat----------------------------aagatttctaatttaaactc-aaaattttaaAACATTGGTTAAAAAATTTA--------------ACATTAATTCAAAATA-TGAAATC--TTGTAAATAGTGCTTTTTACATTCAAGAATCACACTAA-TGAACATCACAAAATGCCCGCTGATAACCGCTATGAAACTCTTTAAGCAACAGGTTC-----TGT-ATGAATTTTACTCCTC--ATGATTTGA--AGATTATGCATTAAT------------------------------------------------------------TTCTTGTTCCTGTTATTTTCTTTC-------------------------CAATTT--AGTCTTTACATAcaca------------attcaatttagtcttt--------------------------------------------------acatagacaaaactcctataaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3239257 441 + 7633303 aaatctttaagggagtttaattaactaagttgtaaatggaagcaaacattattcaaagtcccccttaaaaa-tactttt---aaatgtgctagatttataaatagaacaat----------------------------aagatttctaatttaaactc-aaaattttaaaacattggttaaaaaatttaacatgatatgctgcacattaattcaaaata-tgaaatc--ttgtaaatagtcctttttacattcaagaatcacactga-tgaacatcacaaaaTGCCCGCTAATAACCGCTATGAAACTCTCTAAGCAATAGATTC-----TGT-ATGAATTTTACTCCTC--ATGATTTGA--AGATTATGCATTAAT------------------------------------------------------------TTCTTGTTCCTGTTATTTTCTTTCCAATTTAGTCTTTACATACACAATTCAATTT--AGTCTTTACATAcaca------------attcaatttagtcttt--------------------------------------------------acatagacaaaactcctataac i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21940744 404 - 58131712 aaatcttcaagggagtttaat----taagttgtaaatggaagcaaacattaatcaaagccccccttaaaaa-taatttt---aaatgtgctagatttataaatagaacaat----------------------------aagatttctaatttaaactc-aaaattttaaaacattggttaaaaaatttaacatgatatgctgcacattaattcaaaata-tgaaatc--ttgtaaatagtcctttttacattcaagaatcac---------ACATCACAAAATGCCCGCTGATAACCGCTATGAAACTCTTTAAGCAATAGGTTC-----TGT-ATGAATTTTACTCCTC--ATGATTTGA--AGATTATGCATTAAT------------------------------------------------------------TTCTTCTTCCTGTTATTTTGTTTC-------------------------CAATTT--ATTCTTTACATAcaca------------attcaatttagtcttt--------------------------------------------------acatagacaaaactcctataac i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 35280 466 + 2620224 aaatctttaagggagtttaattaactaagttgtaaatggaagcaaacattattcaaagtcccccttaaaaa-taatttt---aaatgtgctagatttataaatagaacgat----------------------------aagatttctaatttaaactc-aaaattttaaaacattggttaaaaaatttaacatgatatgctgcacattaattcaaaata-tgaaatc--ttgtaaatagtcctttttacattcaagaatcacactga-tgaacatcacaaaatgcccgctgataACCGCTATGAAACTCTTTAAGCAATAGGTTC-----TGT-ATGAATTTTACTCCTC--TTGATTTGA--AGATTATGCATTAAT------------------------------------------------------------TTCTTGTTCCTGTTATTTTCTTTC-------------------------CAATTT--AGTCTTTACATACACA------------ATTCAATTTAGTCTTTACATACACAATTCAATTTAGTCTTTACATAcacaattcaatttagtcttcacatagacaaaactcctataac i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2217977 415 + 10629787 aaatctttaagggagtttaattaactaagttgtaagtggaagcaaacattaatcagagtcccccttaaaaa-taatttt---aaatgcgctagatttataaatagaacaat----------------------------aagatttctaatttaaactc-aaaattttaaaacattggttaaaaaatttaacatgatatgctgcacattaattcaaaata-tgaaatc--ttgtaaatagtcc-ttttacattcaagaatcacactga-tgaacatcacaaaaTGCCTGCTGATAACTGCTATGAAACTCTTTAAGCAATAGGTTC-----TGT-ATGAATTTTACTCCTC--GTGATTTGA--AGATTATGTATCAAT------------------------------------------------------------TTCTTCTTCCTGTTATTTTGTTTC-------------------------CAATTT--AGTCTTTACATAcaca------------attcaatttagtcttt--------------------------------------------------acatagacaaaactcctacaac i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24180852 389 + 132174527 AAATCTTTAAGGGAGTTTAATTAACTAAGTTGTAAATGGAAGCAAACATTAATCAAAGTTCCCCTTAAAAA-TAATTTT---AAATGTACTAGATTTATAAATAGAACAAT----------------------------AAGATTTCTAATTTAAACAC-AAAACTTTGAATGGTTGGTTAAAAA-GTTAACATAATGTGCTTCACATTAATTTAAAATA-TGAAACC--TTATACATAGTCCTTTTTACATTCAAGAATCACACTGA-AAAA-ATCACAAAATGCCCACTGGTAACTGCCATGAAACTCTGTAAGCAATTGATCT-----TGT-ATGAATTTTACTCCTCTAATGATTTGA--AGATCATGTATCAAT------------------------------------------------------------TCTTTCTTCTTCTTATTTTGTTTT-------------------------CA-----------------------------------------ttagtcttt--------------------------------------------------acatagacaaaactgctatatc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10572286 388 - 21366645 aaatctttaagggagtttaattaactaagttgtaaatggaagcaaacattaatcaaagttccccttaaaaa-taatttt---aaatgtactagatttataaatagaacaat----------------------------aagatttctaattcaaactc-aaaattttgaatagttggttaaaaa--ttaacataatgttcttcacattaattcaaaata-tgaaacc--ttataaatagtcctttttacattcaagaatcacactga-aaaacatcacaaaatgcccactgGTAACTGCCATGAAATTCTGTAAGCAATTGGTCT-----TGT-ATGAATTTTACTCCTCTAATGATTTGA--AGATCATGCATC-AT------------------------------------------------------------TCTTTCTTCTTATTACTTTATTTC-------------------------CA-----------------------------------------ttagtcttt--------------------------------------------------acgtagacaaaactgctatctc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3723108 389 - 13033340 aaatctttaagggagtttaattaactaagttgtaaatggaagcaaacattaatcaaagttccccttaaaaa-taattat---aaatgtactggatttataaatagaacaat----------------------------aagatttctaatttaaactc-aaaattttgaatagttggttaaaat--ttaacataatgtgcttcacattaattcaaaata-taaaacc--ttataaatactcctttttacattcaagaatcacactga-aaaacatcacaaaatgcccactgGTAACTGCCATGAAACTCTGTAAGCAATTGGTCT-----TGT-ATGAATTTTACTCCTCTAATGATTTGA--AGATCATGCATCAAT------------------------------------------------------------TCTTTCTTCTTATTACTTTGTTTC-------------------------CA-----------------------------------------ttagtcttt--------------------------------------------------atgtagacaaaactgctatatc i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5212673 389 + 11604778 aaatctttaagggagtttaattaactaagttgtaaatggaagcaaacattaatcaaagttccccttaaaaa-taatttt---aaatgtactagatttataaatagaacaat----------------------------aagatttctaatttaaactc-aaaattttgaatagttggttaaaaa-tttaacataatgtgcttcacattaattcaaaata-tgaaacc--ttataaatagtcctttttaca-tcaagaatcacactga-aaaacatcacaaaatgcccactgGTAACTGCCATAAAACTCTGTAAGCAATTGGTCT-----TAT-ATGAATTTTATTCCTCTAATGACTTGA--AGATCATGCATCAAT------------------------------------------------------------TCTTTCTTCTTATTACTTTGTTTC-------------------------TA-----------------------------------------ttagtctat--------------------------------------------------acatagacaaaactgctatatc i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 123734 419 + 36342412 ------ttgagggagtttaattaactaagttgtaaatggaaccaaacattcatcaaagtctctctt-aaaa-taatttt---aaatatcttcagtttataaatagaataat-------------------------------atttctaatttaaatta-aaaaaattttaaaaacataaagaatttttattttagcatgctgtatattaatttaaaata-tgaaacttattataaatagttctttttatattcaagagtcacactga-aaaacaatacaaaatgcccattgGTAACTGCCTGAAAAGTCTGTAATTCACAGGTCCTATAGTGT-ATGGAATTTACTTCCT--CTCATCTGA--AGATCATGCACCGAT---------------------------------------------------------------TTCTTCTTGTTAttttgtttt-------------------------taattttaaaatgttatatgtgcacccaggttaaggagtcaa-agagttctt--------------------------------------------------ccatatttg----ttatataaa i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13403761 376 + 40214260 AAAGCtttaagtgatttttattaactaaattggaaacggaaccaaacatttacaaaaatcccccttaaaaattattttt---aaatatatgaattttataactaga---at----------------------------aaGTTTTCATTTTTAAACTC-CAAATTT-----AAGTGTTTTAAGTTCTTATTTTAATATGCTGCACATTAATGTAAAATATTGAAATC-ATTGTCAATAATCCTTTTTATACTAAAAAGAAATAGTAAGAAAACACCCCAAAATGCCCATTTACAGTTGCTATAAAACACTTTGAGCCATAGGTCC-----TGT-AGAAATTTTACTCTCT--ATAATCTGA--AGATCATGCATCATT------------------------------------------------------------TCTTTCTTCTTGCtatttttttaa-------------------------gatgtt------------------------------a--------------t--------------------------------------------------atatgcacataagttc------ i canFam3.chr30 I 1369 C 0 s dasNov3.JH579377 1801299 504 - 2868945 aaatctttaaaggagtttaattaactaggttgtaaatggaaccaaacattaattaaagctcctcataaatg-tgattttttaaaatgtactaggtttataaatatgatagagtaaataaatataaaattttataatttgaagatttctaattttaattctaaaattttgaaaaacattgtgaaatttttattttcatatactgcacattaatttagcaaa-ttta-----ttgtaaatagttctttttatattcagaggtcaccctga-aaagcacctccaaatgcccattgacTGCTGTTATAAAATTTTATTTGTCATAGGTCC-----TTTAATGGATTTTACTTTCC--ATGGTCTTACCAGA-CATGCATCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCtcccagcccctccatcctagcaccccttcct-------------------------caga----agatactacattca--------------attcattgcagtattt-------------------------------------------------cttttggatttcacttctatatc i dasNov3.JH579377 C 0 I 142 a score=78075.000000 s hg38.chrUn_KI270749v1 4601 9 + 158759 ag-aaaaact s panTro5.chr1 101786067 9 - 228573443 ag-aaaaact i panTro5.chr1 C 0 C 0 s panPan2.chr15 44364353 9 + 99763055 ag-aaaaact i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67494922 9 - 121039945 ag-aaaaact i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23402744 9 + 169600520 ag-aaaaact i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24006723 9 + 171882078 ag-aaaaact i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13251874 9 - 40200012 ag-aaaaact i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3239698 9 + 7633303 ag-aaaaact i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941148 9 - 58131712 ag-aaaaact i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 35746 9 + 2620224 ag-aaaaact i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2218392 9 + 10629787 ag-aaaaact i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24181241 10 + 132174527 agaaaaaacc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10572674 9 - 21366645 ag-aaaaacc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3723497 9 - 13033340 ag-aaaaacc i cebCap1.NW_016107324v1 C 0 I 22 s aotNan1.NW_018501505v1 5213062 9 + 11604778 ag-aaaaacc i aotNan1.NW_018501505v1 C 0 I 22 s otoGar3.GL873530 124153 8 + 36342412 ag-agcagt- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13404137 7 + 40214260 ---aaaaatt i canFam3.chr30 C 0 C 0 e dasNov3.JH579377 1801803 142 - 2868945 I a score=121027.000000 s hg38.chrUn_KI270749v1 4610 28 + 158759 gaaaacaaagagggtgcattcc-tt--tgct s panTro5.chr1 101786076 28 - 228573443 aaaaacaaagagggtgcattcc-tt--cact i panTro5.chr1 C 0 C 0 s panPan2.chr15 44364362 28 + 99763055 gaaaacaaacagggtgcgttcc-tt--cgct i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67494931 23 - 121039945 -----taaagagggtgtgttcc-tt--cgct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23402753 28 + 169600520 taaaacaaagagggtgcgttcc-tt--tgct i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24006732 28 + 171882078 taaaacaaagagggtgcgttcc-tt--tgct i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13251883 28 - 40200012 taaaacaaagagggtgcgttcc-tt--tgct i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3239707 28 + 7633303 taaaacaaagagggtgcgttcc-tt--cgct i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941157 28 - 58131712 taaaacaaagagggtgcattcc-tt--cgct i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 35755 28 + 2620224 taaaacaaagagggtgcgttcc-tt--cact i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2218401 28 + 10629787 taaaacaaagagggtgcgttca-tt--tgct i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24181251 22 + 132174527 -----taaggaggatgggctcc-tt--cac- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10572683 22 - 21366645 -----taaggaggatgggctcc-tt--cac- i saiBol1.JH378136 C 0 C 0 s otoGar3.GL873530 124161 26 + 36342412 ---accttagacccgtcatcccatt--tgct i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13404144 19 + 40214260 -----------gaaaaccttcc-tcaatgct i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5213071 22 + 11604778 I e cebCap1.NW_016107324v1 3723506 22 - 13033340 I e dasNov3.JH579377 1801803 142 - 2868945 I a score=556471.000000 s hg38.chrUn_KI270749v1 4638 78 + 158759 tgctttctgaggacgccctactctaaaaggcagtagc-----------tttcaataaactatgtcttctt-ctcattttactctgtgact s panTro5.chr1 101786104 46 - 228573443 tgctttctga-------------------------------------------ataaactatgtcttctt-ctcatggtactctgtgact i panTro5.chr1 C 0 C 0 s panPan2.chr15 44364390 78 + 99763055 tgctttctgaggacgccctactccaaaaggcagtagc-----------tttcaataaactatctcttctt-ctcattgtactctgtgact i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67494954 78 - 121039945 tgctttctgaggacgccctactctgaaaggcagtagc-----------tttcaataaactatgtcttctt-ctcattgtactctgtgact i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23402781 78 + 169600520 tgctttctgaggacaccctactctaaaaggcagcagc-----------tttctataaactatgtcttctt-ctcattgtactctgtgact i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24006760 78 + 171882078 tgctttctgaggacatcctactctaaaaggcagcagc-----------tttctataaactatgtcttctt-ctcattgtactctgtgact i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13251911 78 - 40200012 tgctttctgaggacaccctactctaaaaggcagcagc-----------tttctataaactatgtcttctt-ctcattgtactctgtgact i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3239735 78 + 7633303 tgctttctgaggacaccctactctaaaaggcagcagc-----------tttctataaactatgtctgctt-ctcattgtactctgtgact i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941185 78 - 58131712 tgctttctgaggacaccctactctaaaaggcagcagc-----------tttctataaactatatcttctt-ctcattgtactatgtgact i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 35783 78 + 2620224 tgctttctgaggacaccctactctaaaaggcagcagc-----------tttctataaactatgtcttctt-ctcattgtactctgtgact i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2218429 78 + 10629787 tgctttctgaggacaccctactctaaaaggcactagc-----------tttctataaactatgtcttctt-ctcattgtactctgtgact i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24181273 75 + 132174527 tgctttctgaggatgccctactctagacggcaatagc-----------tttcaataaactat---ctctt-ctcattgtactctgagact i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10572705 73 - 21366645 tgctttctgaggacgccctactctagaaggcaatagc-----------tttcaataaactat---ctctt-ttcactgtactct--gact i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3723528 75 - 13033340 tgctttctgaggacgccctactctagaaggcaatagc-----------tttcaataaactat---ctctt-ctcattgtactctgtgact i cebCap1.NW_016107324v1 I 22 C 0 s aotNan1.NW_018501505v1 5213093 75 + 11604778 tgctttctgaggacgccctactctagaaggcaatagc-----------tttcaataaactat---ctctt-ctcattgtattctctgact i aotNan1.NW_018501505v1 I 22 C 0 s otoGar3.GL873530 124187 88 + 36342412 --tcttcttgggaaacatttctttcaattaatgtagcaattccttggatttcaattctccatatctaagtactagtttaattctgaaacc i otoGar3.GL873530 C 0 I 114 s canFam3.chr30 13404163 32 + 40214260 ------------------tgttatataaaatggcaat-----------atccaat----------tcctt-c------------------ i canFam3.chr30 C 0 C 0 e dasNov3.JH579377 1801803 142 - 2868945 I a score=594393.000000 s hg38.chrUn_KI270749v1 4716 69 + 158759 caccttgaattctttcctgtgtgaggcccaaaaaccctctcttgaagtgtggatcgg-acctctttttcc s panTro5.chr1 101786150 70 - 228573443 caccttgaattctttcctgtgtgaggcccaagaaccctctcttgaagcatggattgggaccactttttcc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44364468 70 + 99763055 caccttgaattctttcctgtgtgaggccaaagaaccctctcttgaagtctggatcgggacccctttttcc i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67495032 70 - 121039945 cacgctgaattctttgctgtgtgaggcccaagaaccctctcttaaagtctggatcaggactcctttttcc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23402859 70 + 169600520 caccttgaattctttcctgcttgaggcccaagaaccctttcttgaagtctggatcaggacccctttttcc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24006838 70 + 171882078 caccttgaattctttcctgcttgaggcccaagaaccctttcttgaagtctggatcaggacccctttttcc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13251989 70 - 40200012 caccttgaattctttcctgcttgaggcccaagaaccctttcttgaagtctggatcaggacccctttttcc i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3239813 70 + 7633303 caccttgaattctttcctgcttgaggcccaagaaccctttcttgaagtctggatcaggacccctttttcc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941263 70 - 58131712 caccttgaattctttcctgcttgaggcccaagaaccctctcttgaagtctggatcgggacccctttttcc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 35861 70 + 2620224 caccttgaattctttcctgcttgaggcccaagaaccctttcttgaagtctggatcaggacccctttttcc i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2218507 70 + 10629787 caccttgaattctttccttcctgaggcccaagaaccctctcttgaagtctggatcaggacccctttttcc i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24181348 70 + 132174527 caccttgaattctttcctgtgtgaggcctaagaaccctctcttgaagtctggatcaggacccctttatcc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10572778 70 - 21366645 caccttgaattctttcctgtgtgaggcctaagaaccctctcttgaagtctggatcaggacccctttatcc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3723603 70 - 13033340 caccttgaattctttcctgtgtgaggcctaaggaccctctcttgaagtctggatcaggacccctttatcc i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5213168 69 + 11604778 caccttgaattc-ttcctgtgtgaggcctaagaaccctctcttgaagtctggatcaggacccctttatcc i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13404195 38 + 40214260 --cattgcatttgtccctcct-----ctgaagaaatttctttcaa------------------------- i canFam3.chr30 C 0 C 0 e otoGar3.GL873530 124275 114 + 36342412 I e dasNov3.JH579377 1801803 142 - 2868945 I a score=17880.000000 s hg38.chrUn_KI270749v1 4785 2 + 158759 ag s panTro5.chr1 101786220 2 - 228573443 ag i panTro5.chr1 C 0 C 0 s panPan2.chr15 44364538 2 + 99763055 ag i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67495102 2 - 121039945 ag i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23402929 2 + 169600520 ag i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24006908 2 + 171882078 ag i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252059 2 - 40200012 ag i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3239883 2 + 7633303 ag i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941333 2 - 58131712 ag i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 35931 2 + 2620224 ag i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2218577 2 + 10629787 ag i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24181418 2 + 132174527 ag i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10572848 2 - 21366645 gg i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3723673 2 - 13033340 ag i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5213237 2 + 11604778 ag i aotNan1.NW_018501505v1 C 0 C 0 s dasNov3.JH579377 1801945 2 - 2868945 at i dasNov3.JH579377 I 142 C 0 e otoGar3.GL873530 124275 114 + 36342412 I e canFam3.chr30 13404233 0 + 40214260 C a score=3196195.000000 s hg38.chrUn_KI270749v1 4787 361 + 158759 taacaCTAGTACtgttataattaggtaaatgttactcacacctgaaacatggagc-ataaatgattgaatttcatgtctacacaacatttttttccgttaaactgacaattttt---taaaatttttgtttttttcatttttctatgtatgtatcaaagtaccaa--ttccaaactctactccagttttc-taatgagt-------------ctcat-----------aatgcattcagaagcattagaca-ttttatcagatttatc-tttttga--aa----a--ttt-------ttttctaaatagctctaatttacacaggttgctgtgtacacatactgtacatctAATA-ATCAGGAGATTAcctgtactttataccctactcttt-cttcatttacttcctcat s panTro5.chr1 101786222 356 - 228573443 taacaCTAGTACtgttataattaggtaaatgttac----acctgaaacatggagc-ataaatgattaaatttcatttctacacaacagtttttccc-ttaaactgacaattttt---taaaatttttgttttgttcgtttttctatgtatgtatcaaagtaccaa--ctccaaactctaccccagttttc-taatgagt-------------ctcat-----------aatgcattcagaagcattagaca-ttttatcagacttatc-ttttaga--aa----t--ttt-------ttttctagatagctctaatttacacaggttgctgtgtacacatactgtacatctaaca-accagtagattccctgtactttataccctactcttt-cttcagttacttactcat i panTro5.chr1 C 0 C 0 s panPan2.chr15 44364540 359 + 99763055 taacaCTAGTactgttataattaggtaaatgttactcatacctgaaacatggagc-ttaaatgattgaatttcatttctacacaacatttttttcccttaaactgacaattttt---taaaatttttgttttgtttggttttctatgtacatatcaaagtaccaa--ctccaaactctaccccagttttc-taatgagt-------------ctcat-----------aatgcattcagaagcattaaaca-ttttatcagatttatc-tttttg---aa----t--ttt-------ttttctagatacctctaatttacacaggtttctgtgtacacataccatacatctaaca-accaagagattccctgtactttata-cctactcttt-cctcatttacttcctcat i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67495104 361 - 121039945 taacaCTAGTGCtgttataattaggtaaatgttactcacacctgaaacatgcagc-ataaatgattgaatttcatttctacacaacattttttccccttaaactgacaattttt---aaaaatttttgttttgtttggttttctatgtacgtatcaaagtaccaa--ctccaaattctaccccagttttc-taatgagt-------------ctcat-----------aatgcattcagaagcattagcta-ttttatcagatttatc-tttttga--aa----t--ttg-------ttttctagatagctctaatttacacaggttgctgtgtacacataccatacatctaaca-accaggagattccctgtactttataccctactcttt-cctcatttacttcctcat i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23402931 358 + 169600520 taacaCTAGTactgttatagttaggtaaatgttactcacacctgaaatatggggc-ataaatgattgaatttcatttctacaca----tttttccccttaaactgacaattttt---ttaaatttttgttttgtttagttttctgtgtacgtatcaaagtaccaa--ctccaaactctaccccagttttc-tagtgagt-------------ctcat-----------aatgcattcagaagcattagaca-ttttatcagatttatc-tttttga--aa----a--ttt-------ttttctagatagctccaatttacacaggttgctgcgtacacatactgtacatctaaca-accaggaaattccctgtactttataacctactctttccctcatttacttcctcat i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24006910 358 + 171882078 taacaCTAGTactgttatagttaggtaaatgttactcacacctgaaacatggggc-ataaatgattgaatttcatttctacaca----tttttccccttaaactgacaattttt---ttaaatttttgttttgtttagttttctgtgtacgtatcaaagtaccaa--ctccaaactctaccccagttttc-tagtgagt-------------ctcat-----------aatgcattcagaagcattagaca-ttttatcagatttatc-tttttga--aa----a--ttt-------ttttctagatagctccaatttacacaggttgctgcgtacacatactgtacatctaaca-accaggaaattccctgtactttataacctactctttccctcatttacttcctcat i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252061 358 - 40200012 taacaCTAGTACtgttatagttaggtaaatgttactcacacctgaaacatggggc-ataaatgattgaatttcatttctacaca----tttttccccttaaactgacaattttt---tttaatttttgttttgtttagttttccgtgtacgtatcaaagtaccaa--ctccaaactctaccccagttttc-tagtgagt-------------ctcat-----------aatgcattcagaagcattagaca-ttttatcagatttatc-tttttga--aa----a--ttt-------ttttctagatagctccaatttacacaggttgctgcgtacacatactgtacatctaaca-accaggaaattccctgtactttataacctactctttccctcatttacttcctcat i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3239885 357 + 7633303 taacaCTAGTACtgttatagttaggtaaatgttactcacacctgaaacatggggc-ataaatgattgaatgtcatttctacaca----ttttttcccttaaactgacaattttt---taaaatatttgttttgtttagttttccgtgtacgtatcaaagtaccaa--ctccaaagtctaccctagttttc-tagtgagt-------------ctcat-----------aatgcattcagaagcattagaca-ttttatcagatttatc-tttttga--aa----a--ttt-------ttttctagatagctccaatttacacaggttgctgcatacacatactgtacatctaacc-accaggaaattccctgtactttataacatactcttt-cctcatttacttcctcat i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941335 358 - 58131712 taacaCTAGTactgttatagttaggtaaatgttactcacacctgaaatatggagc-ataaatgattgaatttcatttctacaca----ttttttcccttaaactgacaattttt---taaaatttttgttttgtttagttttctgtgtaggtatcaaagtaccaa--ctccagactctaccccagttttc-tagtgagt-------------ctcat-----------aatggattcagaagcattagaca-ttttatcagatttatc-tttttga--aa----a-tttt-------ttttctagatagctccaatttacacaggttgctgtgtacacatactgtacatctaacg-accaggaaattccctgtactttataacctactctgt-tctcatttacttcctcat i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 35933 357 + 2620224 taacaCTAGcactgttatagttaggtaaatgttactcacacctgaaacatggggc-atgaatgattgaatttcatttctacaca----ttttttcccttaaactgacaattttt---taaaatttttgttttgtttagttttccgtgtacgtatcaaagtaccaa--ctccaaactctaccccagttttc-tagtgagt-------------ctcat-----------aatgcattcagaagcattagaca-ttttatcagatttatc-tttttga--aa----a--ttt-------ttttctagatagctccaatttacacaggttgctgcatacacatactgtacatctaaca-accaggaaattccctgtactttataatctactcttt-cctcatttacttcctcat i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2218579 359 + 10629787 taacaCTAGTactgttatagttaggtaaatgttacccacacctgaaacatggagc-ataaatgattgaatttcatttctacacg----ttttttcccttaaactgacaattttt---aaaaatttttgttttgtttggttttctatgtacatatcaaagtaccaa--ctccaaactctaccccagttttc-tagtgagt-------------ctcat-----------aatgcattcagaagcattagaca-ttttatcagatttatc-tttttga--aa----tttttt-------ttttctagatagctccaatttacacaggttgctgtgtacacatactgtacatctaaca-accaggaaattccctgtactttataacctactcttt-cctcatttacttcctcat i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24181420 351 + 132174527 taacaCTAatactgttttaattaggtaaatgttacttacacctgatacatggagg-ataaatgattaaatttcatttctacacaacgtt-ttt----ttaaactggcaattttt----aaaatttttgttttg----gttttctacatatatatcaaaatacaaa--ctccaaactccaccccagtttcc-taatgagt-------------ctcat-----------aatgcattcaaaagccttagaca-ttttatcagatttatc-ttttgaa--aa----t--ttt-------ttttctagacagttctaatttacatgggttgctgtgtacacatactatacatctaaca-accaggagattccctgtactttatcccctactcttt-tttttttttttttttttt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10572850 337 - 21366645 taacaCTAGTACTGTTATAATTAGGTAAATGTTACTCACACCTGATATATGGAGC-ATAAATGATAAAATTTTATTTCTACACAACATT-------------------GTTTTT----AAAATTtttgtttcg----gttttctacgtatatatcaaaataccaa--ctccaaactctaccccagtttcc-taatgagt-------------ctcat-----------aatgcattcagaagccttagaca-ttttatcagatttatc-ttttgaa--aa----a--ttt-------ttttctagacagttctaatttacatgggttgctgtgtacacatactatacatctaaca-accaggagattccctgtactttatcccctactcttt-cttcatttacttcctttt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3723675 353 - 13033340 taacaATAGTactgttataattaggtaaatgttactcacacctgatatatggagc-ataaatgattaaattttatttctacacaacatttttt----ttaaactggcaattttt----taaatttttattttg----gttttctacgtatatatcaaaataccaa--ctccagactctcccccagtttcc-taatgagt-------------ctcat-----------aatgcattcagaagccttagacatttttatcagatttatc-ttttgaa--aa----a--ttt-------ttttctaggcagttctcatttacatgggttgctgtgtacacatactatacatctaaca-accaggggattccctgtactttatcccctactcttt-cctcatttactcccttat i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5213239 347 + 11604778 taacaCTAGTactgttataattaggtaaatgttactcacatctgacacatggagc-ataaatgattaaatttgatttctatacaacatt--tt----tttaactggcaattttt----aaaatttttgttttg----gttttctatgtatatatcaaaataccaa----ccaaactctaccccagtttcc-taatgagt-------------ctcat-----------aatgcattcagaagccttagaca-ttttatcagatttatc-ttttgaa--aa----g---tt-------ttttctagaCAGTTCTAATTTACATGGATTGCTGTGTACACATACTATACATCTAAAA-ACCAGGAGAttccctgtactttatcccctactcttt-cctcatttacttccttat i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 124389 319 + 36342412 tagtattcatattgttatgactaggtcaatggcactcagaactggcccagggagt-gtaaatagttgtatttctttgttacataacattttcttctcttgaattgac-----tt-------attgttctcttatttggttttctgtatctgtattgaaaagaaaaccctctaaactctatcccagttgtcataatgagt-------------cctac-----------aataaactgag-atcattaggta-ttttatcagctttatc-tttttgaagaa----a--ctt-------ttttctagccagttc-------------------------------------ctaacc-acctgGAGAGTCTCTGTACTGTatgcctttctcttt-ccccctctactccttcat i otoGar3.GL873530 I 114 C 0 s canFam3.chr30 13404233 311 + 40214260 --------------------ttaatttagcaatgctt---------------------------ttgaattttacttctatatc----t--------ctaaaataatagtctaatactgaaactattGTT---------------CATATATATGTAAAT--TAG--TTCCCAACTGTACTCCAACTGTC-TAATGAatatatatatatatattcatatatatatatcaatatatTCAGA--CATTAGGTA-TTTTAACAGTTTTATCATTTTCAA--GA----A--TTT-------TTTTC--ATTAGTTCTGATTTACAATGATTGATATTTACACATGCTCTCTTCCTTATATATCTGGTGGAttcctatgccttatgcccttctcttt-cctcatatattattcaat i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1801947 359 - 2868945 tagcattcatattattattacttggtaaatgctacttacaactgacccatctagcaaaaaatggttacatttctttcttctgcagaattttctttccttgatttgatcattttc---------tttagttttgcttagttttctgcttatgtatcaaaaaattaa--ctccaaactccttgccatttgtc-aatgatat-------------ctccc-----------aatatattcagaagcattaaata-ttttat--gtttgatc-tttttga--agcagta--tttcctggagtctttttgccagttctgatttacatggaattccgttgatacctgttgcacatctaaca-acctagagatt-ccTGTATCCTAAAAAAAATTTTTT-CTTT-----CTTCCTTCT i dasNov3.JH579377 C 0 C 0 a score=28792.000000 s hg38.chrUn_KI270749v1 5148 3 + 158759 ttt s panTro5.chr1 101786578 3 - 228573443 ttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44364899 3 + 99763055 ttt i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67495465 3 - 121039945 ttt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23403289 3 + 169600520 ttt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24007268 3 + 171882078 ttt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252419 3 - 40200012 ttt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240242 3 + 7633303 ttt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941693 3 - 58131712 ttt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36290 3 + 2620224 ttt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2218938 3 + 10629787 ttt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24181771 3 + 132174527 ttt i calJac3.chr10 C 0 I 1302 s saiBol1.JH378136 10573187 3 - 21366645 ttt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3724028 3 - 13033340 ttt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5213586 3 + 11604778 ttt i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 124708 3 + 36342412 ttt i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13404544 2 + 40214260 tt- i canFam3.chr30 C 0 C 0 e dasNov3.JH579377 1802306 0 - 2868945 C a score=1054163.000000 s hg38.chrUn_KI270749v1 5151 146 + 158759 agtgaaactcttctccagtaaattcctgagataggatgtattggatgtagagttttagaatctt-gcc--------atgctg-taaatgc-ttattattgtttcctcctatctgattta--gtttggttgga-gat-actattctgc-attagaaataa-ttt s panTro5.chr1 101786581 151 - 228573443 agtgaaactcttctccagtgaattcctgagataggatgtatggacggtagagtttta--atcttcgcc--------atgctgctaaatgccttattattgttcctcgctatctgatttacagtttggttggaagat-actattctgccattagaaataa-ttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44364902 148 + 99763055 agtgaaactcttctccagtaaattcctgagataggatgtattggatgtagagttttagaatctt-gcc--------atgctg-taaatgc-ttattattgtttcctcctatctgatttatagtttggttggg-cat-actattctgc-attagaaataa-ttt i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67495468 148 - 121039945 agtgaaactcttctccagtaaattcctgagatagggtgtattgaatgtagagttttagaatctt-gcc--------atgctg-taaatgc-ttattattgattcctcctatctgatttatagtttggttggg-cat-accattctgc-attagaaataa-ttt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23403292 142 + 169600520 agtgaaactcttctccaataatttcctgagataggatgtattggctgtagagttttagaatctt-gca--------atgttg-taaatgc-ttatgattgtttccacctatctgatttctagtttggttgcg-cat-act--------attagaaataatttt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24007271 142 + 171882078 agtgaaactcttctccaataatttcctgagataggatgtattggctgtagagttttagaatctt-gca--------atgttg-taaatgc-ttatgattgtttccacctatctgatttctagtttggttgcg-cat-act--------attagaaataatttt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252422 142 - 40200012 agtgaaactcttctccaataatttcctgagataggatgtattggctgtagagttttagaatctt-gca--------atgttg-taaatgc-ttatgattgtttcctcctatctgatttctagtttggttgca-cat-act--------attagaaataatttt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240245 142 + 7633303 agtgaaactcttctccaataatttcctgagataggatgtattggctgtagagttttagaatctt-gca--------atgttg-taaatgc-ttatgattgtttcctcctatctgatttctagtttggttgcg-cat-act--------attagaaataatttt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941696 135 - 58131712 aatgaaactcttctccaataatttcctgaga-------tattggctgtagagttttagaatctt-gca--------atgttg-tcaatgc-ttatgagtgtttcctcctatctgatttctagtttggttggg-cat-act--------atcagaaataatttt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36293 142 + 2620224 agtgaaactcttctccaataatttcctgagataggatgtattggctgtagagttttagaatctt-gca--------atgttg-taaatgc-ttatgattgtttcctcctatctgatttctagtttggttgcg-cat-act--------attagaaataatttt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2218941 142 + 10629787 agtgaaactcttctccaataatttcctgagataggatgtattggctgtagagttttagaatctt-gca--------atgttg-taaatgc-ttatgattgtttcctcctatctgatttctagtttggttggg-cat-act--------attagaaataatttt i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10573190 147 - 21366645 agtgaaactcttatccattagcatcctgagataggatgtattggatgtagagttttagaatctt-gca--------atg-tg-taaatgc-ttattattgttttctcctatctgattcatagctaggttgga-cat-actattctgc-attataaataattt- i saiBol1.JH378136 C 0 I 1 s cebCap1.NW_016107324v1 3724031 148 - 13033340 agtgaaactcttatccattaacttcctgagataggatgtattggatacagagttttagaatctt-gca--------atgcta-taaatgc-ttattattgttttctcctatctgattcatagctaggttgga-cat-actattctgc-atcataaataattt- i cebCap1.NW_016107324v1 C 0 I 1 s aotNan1.NW_018501505v1 5213589 148 + 11604778 agtgaaactcttatccattaacttcctgagataggatgtattggatgtagagttttagaatctt-gca--------atgctg-taaatgc-ttattatcattttctcctatctgattcatagctaggttgga-cat-actattctgc-attagaaataattt- i aotNan1.NW_018501505v1 C 0 I 2732 s otoGar3.GL873530 124711 154 + 36342412 agtggaa-tattctccagcaacttcctgagatacaatgtactggcagtatagttttaaaacttc-acgtattgaatatattg-aaaacat-tt-tcattattttctcatatctgattgataagttgagtgta-tat-attattctac-attggaaataaatg- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13404546 146 + 40214260 agtgtaacattcttccagtaactttctgagatagtatgcattggaagtattgttttggaaactt-gc---------atatta--aaatgc-tttttattaatacctcttat-tgacttatagtttcactaga-cataactattctac-attgaaaataattt- i canFam3.chr30 C 0 C 0 e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=434844.000000 s hg38.chrUn_KI270749v1 5297 71 + 158759 gtttttcaatttataaggctttg----cttgttttctagtgaccatttatat--ttctct-tct-ctggaaattttaag s panTro5.chr1 101786732 70 - 228573443 GTTTTGCAATTTATAAG-CTTTG----CTTGCTT-CTAGTGACCATTT-TAT--TTCTCTGTCTGCTGAAAATTTGAAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44365050 71 + 99763055 gttttgcaatttataaggctttg----cttgtcttctagtgaccatttttat--ttctct-tct-ctggaaatttgaag i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67495616 71 - 121039945 gttttgcaatttataaggctttg----cttgtcttctagTGACCATTTTTAT--TTCTCT-TCT-CTGGAAATTTGAAG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23403434 71 + 169600520 gttttgcaatgtataaggcttta----tttatcttccagtgaggatttttat--ttctcc-tct-ctggaagtttgaag i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24007413 71 + 171882078 gttttgcaatgtataaggcttta----tttatcttccagtgaggatttttat--ttctcc-tct-ctggaagtttgaag i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252564 71 - 40200012 gttttgcaatgtataaggcttta----tttatcttccagtgaggatttttat--ttctcc-tct-ctggaagtttgaag i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240387 71 + 7633303 gttttgcaatgtataaggcttta----tttatcttccagtgaggatttttat--ttctcc-tct-ctggaagtttgaag i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941831 71 - 58131712 gttttgcaatttataaggctttg----tttatcttccagTGAGAAGTTTTAT--TTCTCC-TCT-CTGGAAGTTTGAAG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36435 71 + 2620224 gttttgcaatgtataaggcttta----tttatcttccagtgaggatttttat--ttctcc-tct-ttggaagtttgaag i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2219083 71 + 10629787 gttttgcaatttataaggctttg----tttatcttccagtgaggatttttat--ttctcc-tct-ctggaagtttgaag i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10573338 71 - 21366645 cttttgcaatttataaggctttg----cttgtcttctagTGACCATTTTTAT--TTCTCC-TCT-CTAGAACTTTGAGG i saiBol1.JH378136 I 1 C 0 s cebCap1.NW_016107324v1 3724180 71 - 13033340 cttttgaaatttataaggctttg----cttgtcttctagTGACCACTTTTAT--TTCCCC-TCT-CTAGAACTTAGAGG i cebCap1.NW_016107324v1 I 1 I 48 s otoGar3.GL873530 124865 54 + 36342412 --tct--------------cttt----cttctgttttagggacaattt-tat--ttttcc-tct-ctggaaatttgaaa i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13404692 77 + 40214260 ttcttacaatttataagatgtagatatcctatcttctaATGACCTATTTTGtgcttttcc-tct-cagaaagctagaat i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5213737 2732 + 11604778 I e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=26125.000000 s hg38.chrUn_KI270749v1 5368 21 + 158759 tgtcttctttttt-----------tttt--------------------tttt s panTro5.chr1 101786802 21 - 228573443 TGTCTTCTTTTTT-----------TTTT--------------------TTTT i panTro5.chr1 C 0 I 8 s panPan2.chr15 44365121 21 + 99763055 ttttctttccttt-----------tttt--------------------tctt i panPan2.chr15 C 0 I 27 s nomLeu3.chr6 67495687 21 - 121039945 TAACttctttttt-----------tttt--------------------tttt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23403505 17 + 169600520 tatcttctttttt-----------agtt------------------------ i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24007484 17 + 171882078 tatcttctttttt-----------agtt------------------------ i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252635 17 - 40200012 tatcttctttttt-----------agtt------------------------ i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240458 17 + 7633303 tatcttctttttt-----------agtt------------------------ i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941902 17 - 58131712 TATCTTCTTTTTA-----------ATTT------------------------ i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36506 17 + 2620224 tatcttctttttt-----------agtt------------------------ i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2219154 37 + 10629787 catcttctttttt-----------attttttccggagtgtgttgattt---- i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10573409 12 - 21366645 ----TTTTTCTTT-----------CCC------------------------- i saiBol1.JH378136 C 0 C 0 s otoGar3.GL873530 124919 28 + 36342412 tatctttttttctcagtgtactgatttt------------------------ i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13404769 13 + 40214260 tatcctgttttat--------------------------------------- i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5213737 2732 + 11604778 I e cebCap1.NW_016107324v1 3724251 48 - 13033340 I e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=23955.000000 s hg38.chrUn_KI270749v1 5389 8 + 158759 tttcctga s panTro5.chr1 101786831 8 - 228573443 TGTGCTGA i panTro5.chr1 I 8 I 1 s panPan2.chr15 44365169 8 + 99763055 tattttgt i panPan2.chr15 I 27 I 1 s nomLeu3.chr6 67495708 8 - 121039945 tttCCCGG i nomLeu3.chr6 C 0 I 1 s rheMac8.chr7 23403522 8 + 169600520 tttccgga i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24007501 8 + 171882078 tttccaga i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252652 8 - 40200012 tttccaga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240475 8 + 7633303 tttccaga i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941919 8 - 58131712 TTTCCGGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36523 8 + 2620224 tttccgga i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2219191 8 + 10629787 tttcatga i colAng1.NW_012121598v1 C 0 I 4 s rhiBie1.NW_016805531v1 2256022 8 - 4596561 tttcacga i rhiBie1.NW_016805531v1 N 0 N 0 s saiBol1.JH378136 10573421 8 - 21366645 CTCCCTGA i saiBol1.JH378136 C 0 I 2 s otoGar3.GL873530 124947 8 + 36342412 tttcatga i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13404782 4 + 40214260 -ctca--- i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5213737 2732 + 11604778 I e cebCap1.NW_016107324v1 3724251 48 - 13033340 I e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=-6861.000000 s hg38.chrUn_KI270749v1 5397 10 + 158759 gtgtgctg------------------------------gt s panTro5.chr1 101786840 10 - 228573443 gtgtgttg------------------------------ct i panTro5.chr1 I 1 C 0 s panPan2.chr15 44365178 8 + 99763055 gtgtgt--------------------------------gt i panPan2.chr15 I 1 C 0 s nomLeu3.chr6 67495717 16 - 121039945 gtgtgctgt------------------------gatgtgt i nomLeu3.chr6 I 1 C 0 s rheMac8.chr7 23403530 40 + 169600520 gtgtgctgattttttcatgattttctgtgtgtgtgtgtgt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24007509 40 + 171882078 gtgtgctgattttttcatgattttctgtgtgtgtgtgtgt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252660 25 - 40200012 gtgtgctgattttttcatgattttc--------------- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240483 32 + 7633303 gtgtgctgattttttcatgattttc--------tgtgtgt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941927 32 - 58131712 GTGTGCTGATTTTTTCATGATTTtg--------tgtgtgt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36531 32 + 2620224 gtgtgctgattttttcatgattttc--------tgtgtgt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2219203 2 + 10629787 --------------------------------------gt i colAng1.NW_012121598v1 I 4 C 0 s saiBol1.JH378136 10573431 10 - 21366645 GTGTGCTGAT------------------------------ i saiBol1.JH378136 I 2 I 13 s otoGar3.GL873530 124955 10 + 36342412 ---------------ctttattttt--------------- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13404786 10 + 40214260 gtgtgctgat------------------------------ i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5213737 2732 + 11604778 I e cebCap1.NW_016107324v1 3724251 48 - 13033340 I e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=19389.000000 s hg38.chrUn_KI270749v1 5407 5 + 158759 gtgtg- s panTro5.chr1 101786850 5 - 228573443 gtgtg- i panTro5.chr1 C 0 C 0 s panPan2.chr15 44365186 5 + 99763055 gtgtg- i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 67495733 5 - 121039945 gtgtg- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23403570 5 + 169600520 gtgtg- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24007549 5 + 171882078 gtgtg- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252685 4 - 40200012 -tgtg- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240515 5 + 7633303 gtgtg- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941959 5 - 58131712 gtgtg- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36563 5 + 2620224 gtgtg- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2219205 5 + 10629787 gtgtg- i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 124965 4 + 36342412 -ttta- i otoGar3.GL873530 C 0 I 1 s canFam3.chr30 13404796 5 + 40214260 -tttct i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5213737 2732 + 11604778 I e cebCap1.NW_016107324v1 3724251 48 - 13033340 I e dasNov3.JH579377 1802306 0 - 2868945 C e saiBol1.JH378136 10573441 13 - 21366645 I e calJac3.chr10 24181774 1302 + 132174527 I a score=130914.000000 s hg38.chrUn_KI270749v1 5412 30 + 158759 tgtgtgtgtgtgtgt--------------------------------gtgcattggtctagg s panTro5.chr1 101786855 30 - 228573443 tgtgtgtgtgtgtgt--------------------------------gtgtgttggtctagg i panTro5.chr1 C 0 C 0 s panPan2.chr15 44365191 30 + 99763055 tgtgtgtgtgtgtgt--------------------------------gtgtgttggtctagg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 0 30 - 21985 TGTGTGTGTGTGTGt--------------------------------gtgtgttggtctagg i gorGor5.CYUI01005903v1 N 0 C 0 s nomLeu3.chr6 67495738 30 - 121039945 tgtgtgtgtgtgtgt--------------------------------gtgtgttggtctagg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23403575 50 + 169600520 tgtgtgtgtgtgtgt--------gtgcgcgcgcgcgcgcatgc----gtatgttagtataga i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24007554 50 + 171882078 tgtgtgtgtgtgtgt--------gtgtgtgtgcgcgcgcatgc----gtatgttagtataga i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252689 50 - 40200012 tgtgtgtgtgtgtgt--------gtgtgtgcgcgcgcgcatgc----gtatgttagtataga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240520 50 + 7633303 tgtgtgtgtgtgcgc--------gcgcgcgcgcgcgcgcatgc----gtatgttagtatagg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21941964 62 - 58131712 tgtgtgtgtgcgcgcgcgcgcgtgtgtgtgcgtgCCCGCGTGCGCGGGTATGttagtatagg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36568 50 + 2620224 tgcgtgtgtgggtgc--------gtgtgtgcgcgcgcgcatgc----gtatgttagtatagg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2219210 50 + 10629787 tgtgtgtgtgtgtgt--------gtgtgtgtgcgcgcgcgcac----gtatgttactatagg i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 124970 17 + 36342412 ---------------------------------------------ttttatgttggtatagg i otoGar3.GL873530 I 1 C 0 s canFam3.chr30 13404801 28 + 40214260 --tcattatttttct--------------------------------tgatgttggtatagg i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5213737 2732 + 11604778 I e cebCap1.NW_016107324v1 3724251 48 - 13033340 I e dasNov3.JH579377 1802306 0 - 2868945 C e saiBol1.JH378136 10573441 13 - 21366645 I e calJac3.chr10 24181774 1302 + 132174527 I a score=120211.000000 s hg38.chrUn_KI270749v1 5442 18 + 158759 tctattttca-ccactggc s panTro5.chr1 101786885 18 - 228573443 tctattttca-ccactggc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44365221 18 + 99763055 tctattttca-ccactggc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 30 18 - 21985 tctattttca-cctctggc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67495768 18 - 121039945 tctattttca-ccactggt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23403625 18 + 169600520 tctattttca-ccactggc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24007604 18 + 171882078 tctattttca-ccactggc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252739 18 - 40200012 tctattttca-ccactgga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240570 18 + 7633303 tttattttca-ccactggc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21942026 18 - 58131712 tctattttca-ctactggc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36618 18 + 2620224 tctattttca-ccactggc i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2219260 18 + 10629787 tctattttca-ccactggc i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10573454 8 - 21366645 TTTGTTTT----------- i saiBol1.JH378136 I 13 C 0 s otoGar3.GL873530 124987 18 + 36342412 tctattttca-ctcctgga i otoGar3.GL873530 C 0 I 1 s canFam3.chr30 13404829 19 + 40214260 tctattttcatctactagg i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5213737 2732 + 11604778 I e cebCap1.NW_016107324v1 3724251 48 - 13033340 I e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=30163.000000 s hg38.chrUn_KI270749v1 5460 3 + 158759 ttg s panTro5.chr1 101786903 3 - 228573443 ttg i panTro5.chr1 C 0 C 0 s panPan2.chr15 44365239 3 + 99763055 ttg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 48 3 - 21985 ttg i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67495786 3 - 121039945 ttg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23403643 3 + 169600520 ttg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24007622 3 + 171882078 ttg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252757 3 - 40200012 ttg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240588 3 + 7633303 ttg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21942044 3 - 58131712 ttg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36636 3 + 2620224 ttg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2219278 3 + 10629787 ttg i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10573462 3 - 21366645 TTA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3724299 3 - 13033340 TTA i cebCap1.NW_016107324v1 I 48 C 0 s otoGar3.GL873530 125006 3 + 36342412 ttg i otoGar3.GL873530 I 1 C 0 s canFam3.chr30 13404848 3 + 40214260 ttg i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5213737 2732 + 11604778 I e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=3167417.000000 s hg38.chrUn_KI270749v1 5463 348 + 158759 aattctggtggatacattcaatctg-aaattcatacactttaactcttacccatttc-aaaaaattatttacatatatcatacttcattgta-cttttttcttttcccaaat--------gcctgtatttt-gttgctggccctataggaccaattatttaattcattaaactttccct-ttctcattcccaactc---tgtt-tacactaacttttct-gcagatgcagtcagctttaccttcc-aaatctcccattaagttatatatttctgcaataaatttcttaatttttaagaattcta---t----t-tttttgaatatcca--ttttatatcacaccttgttcttgttgtat---tatcttatcttccctctc s panTro5.chr1 101786906 347 - 228573443 aattctggtggacacattcaatctg-aaattcatacactttaactcttacccatttc-aaaaagttatttacatatattatacttcattgta--ttttttcttttcccatat--------gcctgtatttt-gttgctggccctataggaccaattatttaattcattaaactttccct-ttctcattcccaactc---tgtt-tacactaacttttct-ggagatgcagtcagctttaccttcc-aaatctctcattaagttatatatttctgcaataaatttcttaatttttaagaattcta---t----t-tttttgaatatcca--ttttatatcacactttgttcttgttgtat---tatcttatcttccctctc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44365242 348 + 99763055 aattctggtggacacattcaatctg-aaattcatacactttaactcttacccatttc-aaaaaatcatttatatatatcatacttcattgta--ttttttcttttcccaaat--------gcctgtatttt-gttgctggccctataggaccaattatttaattcattaaactgcccct-tcctcattcccaactc----gtt-tacactaacttttccaggggatgccgtcagctttaccttcc-aaatctcccaccaagttatacatttctgcaataaatttcttaatttttaagaattcta--------t-tttttgaatatccattttttttatcacaccttgttcttgttgtat---tatcttatcttccctctc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 51 346 - 21985 aattctggtggacacattcaatctg-aaattcatacactttaactcttacccatttc-aaaaaattatttacatatatcatacttcattgta--ttttttcttttcccaaat--------gcctgtatttt-gttgctggccctataggaccaattatttaattcattaaactttccct-ttctcattcccaactc---tgtt-tacactaacttttct-ggagatgcagtcagctttaccttcc-aaatctcccattaagttatatatttctgcaataaatttcttaatttttaagaattcta---t----t-tttttgaatatcca--ttttatatcacaccttgttcttgttg-at---tatcttatcttccctctc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67495789 344 - 121039945 aattctggtggacacattcaacctg-aaattcatacactttaactcttacccatttc-aaaaaattatttatatatatcatacttcattgta-tttttttcttttcccaaat--------gcctgtatttt-gttgctggccctataggaccaattatttaattcattaaactgtccct-ttctcattcccaactc---tgtt-tacgctaacttttccaggagatgcagtcagctttaccttcc-aaatctcccattaagttatacatttctgtaataaatttcttaatttttaagaattcta---t----t-tttttgaatatccg--ttttatgtcacaccgtgttcttattgta--------ttatcttctctctc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23403646 344 + 169600520 aattctggtggacacattcaatttg-aaattcatacacttgaactcttacccatttcaaaaaaattatttatatatatcatacttcattgta-tttttttcttttcccaaat--------gcctgtatttt-gttgctggccctataggaccaattatgtagttcgttaaactttccct-ttctcactcccaactc---tgtt-tacactaacttctccaggagatgcaatcagctttaccttcc-agatctcccattaacttatacatttctgcaataaatttcttaatttttaagaattcta--------t-tttttggatatcca--ttttatatcacaccttgttcttggtgta--------ttatcttccctctc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24007625 344 + 171882078 aattctggtggacacattcaatctg-aaattcatacacttgaactcttacccatttcaaaaaaattatttatatatatcatacttcattgta-tttttttcttttcccaaat--------gcctgtatttt-gttgctggccctataggaccaattatgtagttcgttaaactttccct-ttctcactcccaactc---tgtt-tacactaacttctccaggagatgcaatcagctttaccttcc-agatctcccattaacttatacatttctgcaataaatttcttaatttttaagaattcta--------t-tttttggatatcca--ttttatatcacaccttgttcttggtgta--------ttatcttccctctc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13252760 344 - 40200012 aattctggtggacacactcaatctg-aaattcatacacttgaactcttacccatttcaaaaaaattatttatatatatcatacttcattgta-tttttttcttttcccaaat--------gcctgtatttt-gttgctggccctataggaccaattatgtagttcattaaactttccct-ttctcactcccaactc---tgtt-tacactaacttctccaggagatgcaatcagctttaccttcc-agatctcccattaacttatacatttctgcaataaatttcttaatttttaagaattcta--------t-tttttggatatcca--ttttatatcacaccttgttcttggtgta--------ttatcttccctctc i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240591 342 + 7633303 aattctggtgaacacattcaatctg-aaattcatacacttgaactcttacccatttc-aaaaaattatttatatatattatacttcattgta-tttttttcttttcccaaat--------gcctgtatttt-gttgctggccctataggaccaattatttagttcatt-aactttccct-ttcccattcccaactc---tgtt-tacactaacttctccaggagatgcagtcagctttaccttct-agatctcccattaacttatacatttctgcaataaatttcttaatttttaagaattcta--------t-tttttggatatcca--ttttatatcacatcttgttcttggtgta--------ttatcttccctctc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21942047 344 - 58131712 aattctggtggacacattcaatctg-aaattcatacacttgaactcttacccatttc-aaaaaattatttatatatatcatacttcattgtattttttttcttttcccaaat--------gcctgtatttc-gttgctggccctataggaccaattatttagttcattaaactttccct-ttctcattcccaactc---tgtt-tgcactaacttctccaggagatgcagtcagctttaccttcc-agatctcccattaacttatacatttctgcaataaatttcttaatttttaagaattcta--------t-tttttggatatcca--ttttatatcacaccttgttcttggtgta--------ttatcttccctctc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36639 343 + 2620224 aattctggtggacacattcaatctg-aaattcatacacttgaactcttacccatttc-aaaaaattatttatatatatgatacttcattgta-tttttttcttttcccaaat--------gcctgtatttt-gttgctggccctataggaccaattatttagttcattaaactttccct-ttctcattcccaactc---tgtt-tacactaacttctccaggagatgcaatcagctttacctttt-agatctcccattaacttatacatttctgcaataaatttcttaatttttaagaattcta--------t-tttttggatatcca--ttttatatcacatcttgttcttggtgta--------ttatcttccctctc i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2219281 343 + 10629787 aattctgctggacacattcaatctg-aaattcatacacttgaactcttacccatttc-aaaaaattatttatatatatcatacttcattgta-tttttttctttccccaaat--------gcctgtatttt-gttgctggccctataggaccaattatttagttcattaaactttccct-ttctcattcccaactc---tgtt-tacactaacttctccaggagatgcagtcagctttaccttcc-agatctcccattaacttatacatttctgcaataaatttcttaatttttaagaattcta--------t-tttttggatatcca--ttttatatcacaccttgttcttggcata--------ttatcttccctctc i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10573465 338 - 21366645 AATTCTGGTGGACACATTCAATCTG-AAATTCATGCACTT------TTACCCATTTC-AAAAAATTACTCATGTATATCATCCTTCATTGTA-TTTTTTT--TTCCCCAAAT--------GTGTGTATATT-GTTGCTAGCCCTATAGAACCAATTATTTAATTCATTAAATTTTCCCT-TTCTCATTCCCAACTCTTTTATT-TACACTAACTTTTCTTAGAGTTGCAGAcagctttaccttac-aagtctcccattaacttatacatttctgcaataaatttctcaa-ttttaagaattctg---g----t-tttttgaatatcca--ttttatatcacaccttgtttttgttgtg--------ttatcttccctctc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3724302 327 - 13033340 AACTCTGGTGGACACATTCAATCTG-AAATTCATGCACTT------TTACCCATTTC-AAAAAATTATTTATGTATATTATCCTTCATCGTA-TTTTTT------CCCAAAT--------GTGTGTATATT-GTTGCTAGCCCTATAGGACCAATTATTTA----ATTAAattttccct-ttctcattcccaactcttttatt-tacactaacttttctaggagttgcagtcagctttaccttacaaagtctcccattaagttatacatttctgcaataaatttcttaa-ttttaagaattctg---g----tgtttttgaatatcca--ttttatatcacaccttgttct-----tg--------ttatcttccctctc i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5216469 336 + 11604778 AATTCTGGTGGACACATTCAATCTG-AAATTCATGCATTT------TTACCCATTTC-AAAAAATTATTTATGTATATCATCCTTCATTGCA-TTTTTTT-----CCCAAAT--------GTGTGTATATT-GTTGCTAGCCCTATAggactgattatttaattcattaaattttccct-ttctcattcccaactcttttatt-tacactaacttttctaggagttgcagtcagctttaccttac-aagtctcctattaagttatacatttctgcaataaatttcttaa-ttttaagaattcta---g----tttttttgaatatcca--ttttatatcacaccttgttcttgttgta--------tcatcttccctctc i aotNan1.NW_018501505v1 I 2732 C 0 s otoGar3.GL873530 125009 323 + 36342412 aattctgatgaatgcatttgatctt-aaagtcatgtattttaacttttacctatttt-gaaaattta--catatatactattctccattgta-ttttttccctttttttaaa--------gcctatatatt-attgctggccctattggactgatcctttacttcactaaacttttcctctcctaatttccaactg--ttgtt-tttatttacttttctaaaatatgtaatcaactttatcttcc-aaatctacc-------------ttgttacaataaat--------tttcaagaatgctttctt----t-gttttgaatataca--ttttatgtcataccttgttcttg---ta--------ttatcttaagtctc i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13404851 365 + 40214260 aaccgtggtgaatacattcaatttgaaaactcatgaactttagttctcacccctttt-aaaaaattatttatgtatatcacactccagtgta-ctgttctgtcattagagatctctttcactctatattttagctgttggtcccattggactgatattttatttcactaaacttttctt-tcccaatttcaaagta---tcttatttactcaattttccaggatatacagtcaactttatcttca-aaatcaactggtaagttatatatttttacaataaaatttttaattattaagaattcta---ttaaat-cttttgttaattca----ttatctcatatcttattcttattgcatgagtgtattaccttttatttc i canFam3.chr30 C 0 I 4140 e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=5858157.000000 s hg38.chrUn_KI270749v1 5811 652 + 158759 tgaggaaattaataattacttttttcccacac-tgtataggctctgtttactttcagttgttttgttta-ttttttgtttctgtgtttgttattggctgtacctagaatctcatgattgtttgttatctgtttgcgttcaagagcaatacaataaatgtttacggtaagcttcaggttcttaggtaataattgtcaactgtggcttccagacagggcaatcaggtcgagaagttttcccagaaaagctcctcatgacatatccactggtctattcctttgggctgatcatgatcttccaactagagtcttccag---tcttctctgaggatataagactaatagactgttatgttttgaatctagatagaggtgaaaattggggagatc-tagctttcagtagttactgttcattttgc-acccctaatttatgtatgaccattgaagatgatattgccagtactaagattcct--tgttacctctctagacagcaaatgtctacttttccaccagcagaacctagaggcattcatgcagcttgatggagtggacattggaaacagtctttcaaccaatcttcctgggttttagccc------tacctttacttctactttcagaggtatcccctgcaaccaatttatgaacattttgtagaatcag s panTro5.chr1 101787253 648 - 228573443 tgaggaaattaataattacttttttcccacat-tgtatagactctgtttactttcagatgttttgttta-ttttttgtttctgtgtttgttattggctgtacctagaatctcgtgatagttggttatctgtttgtgttcaagagcaatacaataaacatttatggtaagcttcaggttcttaggtaataattgtcaactgtggcttccagacagggcaatcaggtcaagaagttttcccagaaaagctcctcatgacatatccactggtctattcctttcagctgatcatgatcttccaagtagagtcttccag---tcttctctgaggatataagactaatag----ttatgttttgaatatagatagaggtgaaaattggggagatc-tagctttcagtagttactgttcattttgc-ccccctaatttatgtatgaccattgaagatgatattgccagtactaagattccc--tgttacctctccagacagcaaatatctacttttccaccagcagaacctagaggcattcatgaggcttgatggagtgggcattggaaacagtctttcaatcaatcttcctgggttttagccc------tacctttacttctactttcagaggtatcccatgcaacctatttatgaacattttgtagaatcag i panTro5.chr1 C 0 C 0 s panPan2.chr15 44365590 652 + 99763055 tgaggaaattaataattacatttttcctacac-tgtatagactctgtttacttccagttgtttggttta-ttttttgtttctgtgtttgttattggatgtacctagaatctcgtgattgttggttacctgtttgtgttcaagaGCAATACAATAAACGTTTACGGTAAGCTTCAGGTTCTTAGGTAATAATTCTCAACTCTGGCTTCCAGACAGGGCAATCAGGTCGAGAAGTTTTCCCAGAAAAGCCCCTCATGGCATATCCATTGGTCTATTCCTTTGGGCTGATCATGATCTTCCAACTAGAGTCTTCCAG---TCTTCTCTGAGGATATAAGACTAATAGACTGTTATGTTTTGAATCTAGATAGAGGTGAAAATTGGGGAGATC-TAGCTTTCAGTAGTTACTGTTCATTTTGG-CCCCCTAATTTATGTATGACCAATGAAGATGATATTGCCAGTACTAACATTCCC--TGGTACCTCTCTAGACGGCAAATTTCTACTTTTCCACCAGCAGAACCTAGAGGCATTCACGAGGCTTGATGGAGTGGGCATTGGGaacagtcttccaaccagtcttcctgggttttagccc------tacctttacttctactttcagaggtatcccgtgcaaccaatttatgaacattttgcagaatcag i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 397 646 - 21985 tgagg-aattaataattac-tttttcccacac-tgtatagactctgtttactttcagttgttttgttta--tatttgtttctgtgtttgttattggctgtacctagaatctcgtgattctttgttatctgtttgtgttcaagagcaatacaataaacgtttacggtaagcttcaggttcttaggtaataattgtcaactgtggcttccagacagggcaatcaggtcgagaagttttcccagaaaagcccctcatgacatatccactggtctattcctttgggctgatcatgatcttccaactagagtcttccag---tcttctctgaggatataagactaatagactgttatgttttgaatctagatagaggtgaaaattggggagatc-tagctttcagtagttactgttcattttg--ccccctaatttatgtatgACCATTGAAGATGATATTGCCAGTACTAAGATTCC---TGTTACCTCTCTAGACAGCAAATGTCTACTTTTCCACCAGCAGAACCTAGAGGCATTCATGAGGCTTGATGGAGTGGGCATTGGaaacagtctttcaaccaatcttcctgggttttagccc------tacctttacttctactttcagaggtat-ccgtgcaagcaatttatgaacattttgtagaatcag i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67496133 647 - 121039945 tgaggaaattaataatt---tttttcccacac-tgtatagactctgtttacttccagttgttttgtttatttttttgtttctgtgtttgttattggctgtacctagaatctcgtgattattggttgtctgtttgtgttcaagagcaatacaataaacgtttacggtaagcttcaggttcttaggtactaattctcaactgtggcttccagacagggcaatcaggtcaagaagttttccccgaaaagcccttcatgacatatccattggtctattcctttgggctgatcatgatcttccaactagagtcttccag---tcttctctgaggatataagactaacagactgttatgttttgaatctagatagaagtgaaaattggggagatc-tagctttcagtagttactgttcattttgc-ccccctaatttatgtatgACCAATGAAGATGATGTTGCCAGTACTAAGATTCCC--TGTTACCTCTCTAGATGGCAAATGTCTACTTTTCCACCAGCAGAATCTAGAGGCATTCACGAGACT---TGGAGTGGGCATTGGaaacagtcttccaaccaatctttctgggttttagccc------tacctttacttctactttcagaggtatcccgtgcaaccaatgtatgaacattttgcagaatcag i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23403990 653 + 169600520 tgaggaaattaataattacttttttcccacac-tgtatagactctgtttacttccagttgttttgttta-ttttttgtttctgtgtttgttgttgactgtacctagaatctcgtgatcgtttgttatctatttgtgttccacagcaatataataaacgtttacggtaagcttcaggttcttaggtaataattctcaactgtggcttcaagacagggcaatcaggttgagaagttttcccagaaaagcctctcatgacatatccattggtctattcctttgggctgatcatgatcttccaactagagtcttccag---tcttctctgagaatataagactaatagacagttaggttttaaatctagatagaggtgaaaattggggagatc-tacctttcagtaattactgttcattttgg-ccccctaatttacatatg-ccaatgaagatgagattgccagtactaagattccctgtgttacctctctagatggtaaatgtgtacttttccaccagcagaacctagagcctttcacaaggcttgatggagtgggcactggaaacagtcttccaataaatcttcctgggttttagccc------tacctttacttgtactttcagaggtatcccgtgcaaccaatttatgaacattttgcagaataag i rheMac8.chr7 C 0 I 309 s macFas5.chr7 24007969 653 + 171882078 tgaggaaattaataattacttttttcccacac-tgtatagactctgtttacttccagttgttttgttta-ttttttgtttctgtgtttgttgttgactgtacctagaatctcgtgatcgtttgttatctatttgtgttccacagcaatataataaacgtttacggtaagcttcaggttcttaggtaataattctcaactgtggcttcaagacagggcaatcaggttgagaagttttcccagaaaagcctctcatgacatatccattggtctattcctttgggctgatcatgatcttccaactagagtcttccag---tcttctctgagaatataagactaatagacagttaggttttaaatctagatagaggtgaaaattggggagatc-tacctttcagtaattactgttcattttgg-ccccctaatttacatatg-ccaatgaagatgagattgccagtactaagattccctgtgttacctctctagatggtaaatgtgtacttttccaccagcagaacctagagcctttcacaaggcttgatggagtgggcactggaaacagtcttccaataaatcttcctgggttttagccc------tacctttacttgtactttcagaggtatcccgtgcaaccaatttatgaacattttgcagaataag i macFas5.chr7 C 0 I 309 s macNem1.NW_012010577v1 13253104 653 - 40200012 tgaggaaattaataattacttttttcccacac-tgtatagactctgtttacttccagttgttttgttta-ttttttgtttctgtgtttgttgttgactgtacctagaatctcgtgatcgtttgttatctatttgtgttcaagagcaatataataaacgtttacggtaagcttcaggttcttaggtaataattctcaactgtggcttcaagacagggcaatcaggttgagaagttttcccagaaaagcctctcatgacatatccattggtctattcctttgggctgatcatgatcttccaactagagtcttccag---tcttctctgagaatataagactaatagacagttaggttttaaatctagatagaggtgaaaattggggagatc-tacctttcagtaattactgttcattttgg-ccccctaatttACATATG-CCAATGAAGATGAGATTGCCAGTACTAAGATTCCCTGTGTTACCTCTCTAGATGGTAAATGTGTACTTTTCCACCAGCAGAACCTAGAGCCTTTCACAAGGCTTGATGGAGTGGGCACTGGaaacagtcttccaatcaatcttcctgggttttagccc------tacctttacttgtactttcagaggtatcccgtgcaaccaatttatgaacattttgcagaataag i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3240933 653 + 7633303 tgaggaaattaataattacttttttcccacac-tgtatagactctgtttacttccagttgttttgttta-ttttttgtttctgtgtttgttgttgactgtacctagaatctcgtgatcgtttgttatctatttgtgttcaagagcaatacaataaatgtttacggtaaacttcaggttcttaggtaataattctcaactgtggcttcaagacagggcaatcaggttgagaagttttcccagaaaagcctctcatgacatatccattggtctattcctttgggctgatcatgatcttccaactagagtcttccag---tcttctctgagaatataagactaatagactgttaggttttaaatctagatagaggtgaaaattggggagatc-tacctttcagtaattactgttcattttgg-ccccctaatttacatatg-ccaatgaagatgagattgccagtactaagattccctgtgttacctctctagatggtaaatgtgtacttttccaccagcagaacctagagcctttcacaaggcttgatggagtgggcactggaaacagtcttccaatcaatcttcctgggttttagccc------tacctctacttgtactttcagaggtatcccgtgcaaccaatttatgaacattttgcagaataag i cerAty1.NW_012000887v1 C 0 I 300 s chlSab2.chr26 21942391 653 - 58131712 tgaggaaattaataattacttttttcccacac-tgtatagactctgtttacttccagttgttttgttta-ttttttgtttctgtgtttgttgttggctgtacctagaatcttgtgatcattggttatctgtttgtgttcaagagcaatacaataaacgtttacggtaagcttcaggttcttaggtaataattctcaactgtggcttcaagacagggcaatcaggttgagaatttttcccagaaaagcctctcatgacatatccattggtctattcctttgggctgttcatgatcttccaactagagtcttccag---tcttctctgagaatataagactaatagactgttatgttttgaatctagatagaggttaaaattggggagatc-tagccttcagtaGTTACTGTTCATTTTGG-CCCCGTAATTTACATATG-CCAATGAAGATGATATTGCCAGTACTAAGATTCCCTATGTGACCTCTCTAGATGGTAAATGTGTACTTTTCCACCAGCAGAACCTAGAGCCTTTCACAAGGCTTGATGGAGTGGGCACTGGaaacagtcttccaatcaattttcctgggttttagccc------tacctttacttgtactttcagaggtatcccgtgcaaccaatttatgaacattttgcagaataag i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 36982 653 + 2620224 tgaggaaattaataattatttttttcccacac-tgtatagactctgtttacttccagttgttttgttta-ttttttgtttctgtgtttgttgttgactgtacctagaatctcgtgatcgtttgttatctatttgtgttcaagagcaatacaataaatgtttatggtaaacttcaggttcttaggtaataattctcaactgtggcttcaagacagggcaatcagattgagaagttttcccagaaaagcctctcatgacatatccattggtctattcctttgggctgatcatgatcttccaactagagtcttccag---tcttctctgagaatataagactaatagactgttaggttttaaatctagatagaggtgaaaattggggagatc-tacctttcagtaattactgttcattttgg-ccccctaatttACATATG-CCAATGAAGATGAGATTGCCAGTACTAAGATTCCCTGTATTACCTCTCTAGATGGTAAATGTGTACTTTTCCACCAGCAGAACCTAGAGCCTTTCACAAGGCTTGATGGAGTGGGCACTGGaaacagtcttccaatcaatcttcctgggttttagccc------tacctttacttgtactttcagaggtatcccgtgcaaccaatttatgaacattttgcagaataag i manLeu1.NW_012108674v1 C 0 I 309 s colAng1.NW_012121598v1 2219624 654 + 10629787 tgaggaaattaataattacttttttcccacac-tgtatagactctgtttacttccagttattttgttta-ttttttgtttctgtgtttgttgttggctgtacctagaatctcgtgattgttggttatctgtttgtgttcaagagcaatataataaacgtttacagtaagcttcaggttcttaggtaataatcctcaactgtggcttcaagacagggcaatcaggttgagaagttttcccagaaaagcctctcatgacacatccattggtctattcctttgggctgatcatgatcttccaactagagtcttccag---tcttctctgagaatatatgactaatacactgttatgttttgaatctagatagaagtgaaaattggggagatc-tagctttcagtagttactgttcattttggcccccctaatttacatatg-ccaatgaagatgacattgccagtatgaagattccctatgttacctctctagatggtaaatgtctacttttccaccagcagaacctagagcctttcacaaggtttgatggagtgggcactggaaacagtcttccaatcagtcttcctgggttttagccc------tacctttacttctactttcagaggtatcccgtgcaaccaatttatgaacattttgcagaataag i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10573803 659 - 21366645 tgaggaaattaataattacttttttcccatac-tgtatagactctgtttacttccagctgttttgttta-ttttttttttctgtgtttgttactggctgtacctagaatcttgtgattattcgttatctgtctgtgttcaagagcaatacaataaatgtttatggtaagctttaggttcttaggtaataattctcaac--tggcttcaagacggggcaatcaggtcgagaagtttccccagaaaagctactcatgacatatccattagtctattcctttgggttgatcatgaacttcaaagtaaagtcttccagtcttcttctctgtggatataagactAATAGAG--TTATGTTTCGAATCAAGATAGAGGTGAAAATTGGGGAGATC-TAGCTTTCAGTAGTTACTGTTTGTTTTGG-CCCCCTAATTTATGTATGACCAATGATGATGGCATTGTCAGTACTGAGATTCCCTATGTTGTCCCTCTAGACGGTAAATGTCTACTTTTCTACTGGCAGAACCTAGAGGCATTCACGAGGCTTGATGGAGTGGGCATTGCaaacaatcttccaattagttttcctgggttttagttctacttttacttttacttttactttcagaggtatcctgtgcaaccaatttatgaaccttttacagaatcag i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3724629 637 - 13033340 tgaggaaattaataagtacttttttcccatac-tgtatagactctgtttacttccaactgttttg---g-ttttttttttcggtgtttgttattggctgtatcgagaatcttg-------------tctgtctgttttcaagagcaatacaataaatgtttatggtaagcttctggttcttaggtaataattctcaac--tggcttcaagacagggcaatcaggtcaagaagtttccccagaaaagctactcatgacatatccattagtctattactttgggttgatcatgaatttcaaagtaaagttttccagtcttcttctctgtggatataagactaatagac--ttatgttttgaatcaagatagaggtgaaaattggggagatc-tagctttcggtagttactgtttgttttgg-ctccctaatttatgtatgaccaatgatgatgacattgtcagtactgagattccctatgtcgtctctctagacggtaaatgtctacttttctactggcagaacctagaggcattcacgaggcttgatggagtgggcattgcaaacaatcttccaaccggttttcctgggttttagtcc------tacttttacttttactttcagaggtatcctgtgaaaccaatttatgaacctttcgcagaatcag i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5216805 653 + 11604778 tgaggaaattaataattacttttttcccatac-tgtatagactctgtttacttccaactgttttgttta-tttttcttttctgtgtttgttattggctgtacctagaatcttgtgattattcgttatctgtctgtgttcaagagcaatacaataaatgtttatggtaagcttcaggttcttaggtaataattctcaac--tagcttcaagacagggcaatcaggtcgagaagtttcccccgaaaagctactcatgacatatccattagtccattcctttgggttgatcatgaacttcaaagtaaagtcttccagtcttcttctctgtggatataagactAATAGAC--TTATGTTTTGAATCAAGATAGAGGTGAAAATTGGGGAGATC-TAGCTTTCAGTAGTTACTGTTTGTTTTGG-CCCCCTAATTTATGTATGACCAATGATGATGACATTATCAGTACCGAGATTCCCTATGTTATCTCTCTAGACGGTAAATGTCTACTTTTCTACTGGCAGAACCAAGAGGCATTTACGAGGCTTGATGGAGTGGGCATTGCaaacaatcttccaaccagttttcctgggttttagtcc------tacttttacttttactttcagaggtatcctgtgcaaccaatctatgaacctttcaccgaatcag i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 125332 644 + 36342412 tgacaaaat--acaacaacttttat---agacatgtataaatactactaacttccaattgttttatttt-tgttt-------gtgtttcttactggctatgctcagattctcatggttgttggttatctgtttatgttgaagggcagagcaataaatgcctataataagttccaagtaa--aggtagtaattctcatctgtgcctttccaaaagggtaatctggacggactatatccttgaaagaacccttcatgacacatcctttaatccactactttaggaaaatcattttcttctaggtagagttttccagtcaccttccatgaccatatagaattaacagactgttatactttggggtaaaagaaggatgaagaatggggaaatcttagcattcagtagttaccctctgttttgg-ttgcctattttatgtaaaaccaatga-gataatatatctgatactgagatcccctattttacctctcaagaggataaatctctacttttctgctagtaagatctagaggcattcacgaggcttaatgaagtatgcattgtgaaaagacttctaatgaatcttcctggccttcgaccc------tacttttacctctagcttcagtagtatcctgtgcaaccaattcatggacgttttatggaatcat i otoGar3.GL873530 C 0 C 0 e canFam3.chr30 13405216 4140 + 40214260 I e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=73260.000000 s hg38.chrUn_KI270749v1 6463 7 + 158759 atttccc s panTro5.chr1 101787901 7 - 228573443 atttccc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44366242 7 + 99763055 atttccc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1043 7 - 21985 atttccc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67496780 7 - 121039945 atttccc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23404952 7 + 169600520 atttccc i rheMac8.chr7 I 309 C 0 s macFas5.chr7 24008931 7 + 171882078 atttccc i macFas5.chr7 I 309 C 0 s macNem1.NW_012010577v1 13253757 7 - 40200012 atttccc i macNem1.NW_012010577v1 C 0 I 314 s cerAty1.NW_012000887v1 3241886 7 + 7633303 atttccc i cerAty1.NW_012000887v1 I 300 C 0 s chlSab2.chr26 21943044 7 - 58131712 atttccc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 37944 7 + 2620224 atttccc i manLeu1.NW_012108674v1 I 309 C 0 s colAng1.NW_012121598v1 2220278 7 + 10629787 atttccc i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10574462 7 - 21366645 atttccc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3725266 7 - 13033340 atttccc i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5217458 7 + 11604778 atttccc i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 125976 7 + 36342412 aaatccc i otoGar3.GL873530 C 0 C 0 e canFam3.chr30 13405216 4140 + 40214260 I e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=20901.000000 s hg38.chrUn_KI270749v1 6470 4 + 158759 cgct s panTro5.chr1 101787908 4 - 228573443 ctct i panTro5.chr1 C 0 C 0 s panPan2.chr15 44366249 4 + 99763055 cgct i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1050 4 - 21985 cgct i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67496787 4 - 121039945 cgct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23404959 4 + 169600520 tgcc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24008938 4 + 171882078 tgcc i macFas5.chr7 C 0 C 0 s cerAty1.NW_012000887v1 3241893 4 + 7633303 tgcc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21943051 4 - 58131712 cgcc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 37951 4 + 2620224 tgcc i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2220285 4 + 10629787 cgct i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10574469 4 - 21366645 cact i saiBol1.JH378136 C 0 I 4 s cebCap1.NW_016107324v1 3725273 4 - 13033340 cact i cebCap1.NW_016107324v1 C 0 I 4 s aotNan1.NW_018501505v1 5217465 4 + 11604778 cact i aotNan1.NW_018501505v1 C 0 I 4 s otoGar3.GL873530 125983 4 + 36342412 cact i otoGar3.GL873530 C 0 C 0 e macNem1.NW_012010577v1 13253764 314 - 40200012 I e canFam3.chr30 13405216 4140 + 40214260 I e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=493138.000000 s hg38.chrUn_KI270749v1 6474 55 + 158759 ----acttacaattttacac--tttttggtaagctaagtcagttaccagccatttatggac s panTro5.chr1 101787912 55 - 228573443 ----acttacaattttgcac--tttttggtaagctaagtcagttaccagccatttatggac i panTro5.chr1 C 0 C 0 s panPan2.chr15 44366253 55 + 99763055 ----gcttacaattttgtac--tttttggtaagctaagtcagttaccagccattcatggac i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1054 55 - 21985 ----acttacaattttgcac--tttttggtaagctaagtcagttaccagccatttatggac i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67496791 55 - 121039945 ----acttacaattttgcac--tttttggtaagctaagtcagttaccagccatttatggac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23404963 55 + 169600520 ----acttgcaattttgcac--tttttggtaagctaagtcagttaccagccatttatggac i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24008942 55 + 171882078 ----acttgcaattttgcac--tttttggtaagctaagtcagttaccagccatttatggac i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13254078 55 - 40200012 ----acttgcaattttgcac--tttttggtaagctaagtcagttaccagccatttatggac i macNem1.NW_012010577v1 I 314 C 0 s cerAty1.NW_012000887v1 3241897 55 + 7633303 ----acttgcaattttgcac--tttttggtaagctaagtcagttaccagccatttatggac i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21943055 55 - 58131712 ----acttgcaattttgcac--tttttggtaagctaagtcagttaccagccatttatggac i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 37955 55 + 2620224 ----acttgcaattttgcac--tttttggtaagctaagtcagataccagccatttatggac i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2220289 57 + 10629787 ----actcgcaattttgcactttttttggtaagctaagtccgttaccagccatttatggac i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10574477 55 - 21366645 ----gcttataattttgcac--tttttggtcagctaagtcagttaccagccatatacaaac i saiBol1.JH378136 I 4 C 0 s cebCap1.NW_016107324v1 3725281 55 - 13033340 ----gcttagaattttgcaa--atttttttcagctaagtcagttacccaccatctacaaac i cebCap1.NW_016107324v1 I 4 C 0 s aotNan1.NW_018501505v1 5217473 55 + 11604778 ----gcttagaattttgcac--tttttggtcagctaagtcagttaccagccatctacaaac i aotNan1.NW_018501505v1 I 4 C 0 s otoGar3.GL873530 125987 59 + 36342412 gagagctaacaattttgttc--tcgtttatcaactaagtcagtactcactcatttataaac i otoGar3.GL873530 C 0 C 0 e canFam3.chr30 13405216 4140 + 40214260 I e dasNov3.JH579377 1802306 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=1718680.000000 s hg38.chrUn_KI270749v1 6529 180 + 158759 ttcctattttcaaaaatgttgctgttttctT----TTTATATCACTTGAATAAGCCATTTGTCATCA--TGTTATAGTTTCAGGTGGGAAAATAAGTCTCTCTATGTGTTTAACATGCCATAGTTGCTCAGGTGCCTGCATCTACTCTCATCATTTTTTGAAGAAAGGCTAAATTGTAATGGCACT s panTro5.chr1 101787967 180 - 228573443 ttcctattttcaaaaatgttgctgttttctT----TTTATATCACTTGAATAAGCCATTTGCCTTCA--TGTTATAGTTTCAGATGGGAAAATAAGTATCTCTATGTGTTTAATATGCCATATTTGCTCAGGTGTCTGCATCTACTCTCACCATTTTTTGAATAAAGGCAAAATTGTTATGGCACT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44366308 180 + 99763055 ttcctattttcaaaaatgttgctgttttcCT----TTTATATCACTTCAATAAGCCATTTGCCATCA--TGTTACAGTTTCAGGTGGGAAAATAAGTCTCTGTATGTGTTTCACATGCCATATTTGCTCAGGTGTCTGCATCTACTCTCACCGCATTTTGAAGAGAAGTTAAATTGTTATGGCACT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1109 178 - 21985 ttcctattttc-aaaatgttgctgttttctT----TTTATATCACTTGAATAAGCCATTTG-CATCA--TGTTATAGTTTCAGGTGGGAAAATAAGTCTCTCTATGTGTTTAACATGCCATATTTGCTCAGGTGTCTGCATCTACTCTCACCATTTTTTGAAGAAAGGCTAAATTGTAATGGCACT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67496846 180 - 121039945 ttcctattttcaaaaatgttgccgttttctT----TTTATATCACTTCAATAAACCATTTGCCATCA--TGTTATAGTTTCAGGTGGGAAAATAAGTCTCTGTATATGTTTCACATGCCATATTTGCTCAGGGATCTGCATCTACTCTCACCATGTTTTGAAGAGAGGCTAAATTGTTATGGCACT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23405018 179 + 169600520 ttcctattttcaaaaatgttgctgttTTATT----TTTATATCACTTCAATAAGCCATTTGCCATCA--TGTTATAGGTTGA-GTGGGAAAATAAGTCTCTATATGTGTTTAACATGCCATATTTGCTCAAGTGTCTGCATCTACTCCCACCATTTTTTGAAGAAAGGTTAACTTGTTATGGCACG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24008997 179 + 171882078 ttcctattttcaaaaatgttgctgttTTATT----TTTATATCACTTCAATAAGCCATTTGCCATCA--TGTTATAGGTTGA-GTGGGAAAATAAGTCTCTATATGTGTTTAACATGCCATATTTGCTCAAGTGTCTGCATCTACTCCCACCATTTTTTGAAGAAAGGTTAACTTGTTATGGCACG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13254133 179 - 40200012 ttcctattttcaaaaatgttgctgttTTATT----TTTATATCACTTCAATAAGCCATTTGCCATCA--TGTTATAGGTTGA-GTGGGAAAATAAGTCTCTATATGTGTTTAACATGCCATATTTGCTCAGGTGTCTGCATCTACTCCCACCATTTTTTGAAGAAAGGTTAACTTGTTATGGCACG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3241952 179 + 7633303 ttcctgttttcaaaaatcttgctgttTTATT----TTTATATCACTTCAATAAGCCATTTGCCATCA--TGTTATAGGTTGA-GTGGGAAAATAAGTCTCTACATGTGTTTAACATGCCATATTTGCTCAGGTGTCTGCATCTACTCCCACCATTTTTTGAAGAGAGGTTAACTTGTTATGGCACG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21943110 178 - 58131712 ttcctattttcaaaaatgttgctgttTTATT----TTTTTATCACTTCAAT-AGCCATTTGCCATCA--CGTTATAGTTTGA-GTGGGAAAATAAGTCTCTATATGTGTTTAACATGCCATATTTGCTCAGGTGTCTGCATCTACTCTCACCATTTTTTGAAGAGAGGTTAACTTGTTATGGCACT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 38010 179 + 2620224 ttcctattttcaaaaatgttgctgttTTATT----TTTATATCACTTCAATAAGCCATTTGCCATCA--CGTTATAGGTTGA-GTGGGAAAATAAGTCTCTATATGTGTTTAACATGCCATATTTGCTCAGGTGTCTGCATCTACTCCCACCATTTTTTGAAGAGAGGTTAACTTGTTATGGCACG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2220346 180 + 10629787 ttcctattttcaaaaatgttgctgttTTGTT----TTTATATCACTTCAACAAGCCATTTGCCATCA--TGCTATAGTTTGAGGTGTGAAAATAATTCTCTATATGTGTTTAACATGCCATATTTGCTCAGGTGTCTGCATCTACTCTCATCATTTTTTGAAGAGAGGTTAAATTGTTATGGCACT i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10574532 180 - 21366645 ttcctagcttcaaaaatgttgctgttttctT----TTTATATCACTTCAATAAGCCATTCGCCATCA--TGTTATAGCTTCAGGTGGACAAATAAGTCTCTATATGTGTTTAACATGCCATATTTGCTCAGGTGTCTGCATCTACTCTTGCCACTTTTTGAAGACAGACTACATTGTCATGGCACT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3725336 180 - 13033340 ttcctagcttcaaaaatgttgctgttttctT----TTTATATCTCTTCAATAAGCCATTTGACATCA--TGTTATAGCTTCAGGTGGAAAAATAAGTCTCTATATGTGTTTAACATGCCATATTTGCTCAGGTGTCTGCATCTACTCTTGCCACTTTTTGAAGAGAGACTACATTGTCATGGCACT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5217528 180 + 11604778 ttcctagcttcaaaaatgttgctgttttctT----TTTATATCACTTCAATAAGCCATTTGCCATCA--TGTTATAACTTCAGGTGGAAAAATAAGTCTCTATATGTATTTAACATGCCATATTTTCTCAGGTGTCTGCATCTACTCTTGCCACTTTTTGAAGAGAGACTACATTGTCATGGCACT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 126046 176 + 36342412 atcctatctttaaaaatgttgctgttttctc----tttatatttttttaataatccatttgccatca--cattgcagtttcagaaagcaaaata----tctacatgtgttcaatatgctgtttttGTGCAATTGGCTGCTTCTACTCTTGCCATTTTTCGAAGAGAGGATAAATTGTCATAGTTCT i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1802306 178 - 2868945 TTCCTACCTTCAAAAACATTGCTGTTTCCTTTAGGTTTATGCCATCTTAGTAAGCCATATACCATCAATTTTTAGAGCTTCAGGTAGGAAGA-AAGCCTAT-------TTTACTATGACATATTTACTCAGATGCCTGCATCTATTCTTTCCATTTTTGAACTTCAAGCTACATAGTCATGGTACT i dasNov3.JH579377 C 0 I 460 e canFam3.chr30 13405216 4140 + 40214260 I e calJac3.chr10 24181774 1302 + 132174527 I a score=5172161.000000 s hg38.chrUn_KI270749v1 6709 566 + 158759 AACA------------------------------ACTA--------------------------------------------GTCTTCAAAGtttgg---------------------tttataatttt-------aatggtgtttatttttaacaaagttggtggagtttttttt---tctttgtatattgatttttcttttggttttcagttgttttaagaaataaatggaggg-agagatatgcttcctttgctcccattaaccaaaagaatagtttgaagaatgc--------------aggaattaacttttccattaagtttaagaggacctgcttgagaca-cagctgggccttgagcttttaaaggtgctataactttacaccggtttcatttttttctattgttggtatcttcaaatgatctcatttctctagatttatttttatagttaaattttccctaaaaaattaacctcttcatatatattttcaaatataatgaccaaaaggtacatattacattcttttgaaa-ttttcagttatccagttttccatttttcttgttatattttaataggctctct-cttt----tttgtcatctaatttgtttgtcctttcaaagaaataattttttggatttattgaAAAATTCCATTGCTGTTGGGATGGGAGAAGATTAAATC s panTro5.chr1 101788147 566 - 228573443 AACA------------------------------ACTA--------------------------------------------GTCTTCAAAGTATGG---------------------TTTATACTTTT------TAACGGTGTTTATTTTTAACAAAATTGGTGGAGTTTTTTTT----CTTTGTACATTGATTTTTCTTTTGGTTTTCAGTTGTTTTAAGAAATAAATGGAGGG-AGAGATATGCTTCCTTTGCTCCTATTAACCAAAAGAATAGTTTGAACAACAC--------------AGGAATTAACTTTTCCATTAAGTTTAAGAGGACCTGCTTGAGACA-CAGCTGGGCCTTGAGCTTTTAAAGGTGCTATAACTTTACTTCGGTTTCATTTTTTTCTATTGTTGTTATCTTCAATTGTTCTCATTTCTCTAGATTTATTTTTATAGTTAAATTTTCCCTAAAAAATTAACCTCTTCATATATATTTTCAAATATAATGACCAAAAGGTACATATTGCATTCTTTTGAAa-ttttcaattatccagttttccatttttcttgttatattttAATAGGCTCTCT-CTTT----TTTGTCATCTAATTTATTTGTCTTTTCAAAGAAACAATGTTTTGGATTTATTGAAAAATTCCATTGCTGTTGGGATGGGAGAAGATTAAATC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44366488 565 + 99763055 AACA------------------------------ACTA--------------------------------------------GTCTTCAAAGTTTGG---------------------TTTAGAATTTT------TAATGGTGTTTACTTTTAACAAAATTAGTGGAGTTTTTT------CTTTGTACATTGATTTTTCTTTTGGTTTTCAGTTGTTTTAAGAAATAAACGGAGGG-AGAGATATGCTTCCTTTGCTCCCATTAACCAAAAGAATAGTTTGAACAACAC--------------AGGAATTAACTTTTCCATTAAGTTTAAGAGGACCTGCTTGAGACA-CAGCTGGACCTTGAGCTTTTAAAGGTCCTATAACTTTATACCTGTTTCATTTTTTTCTATTGTTGGTATCTTCAAATGTTCTCATTTCCCTAGATTTATTTTTATAGTTTAATTTTGCGTAAAAAATTAACCTCTTCATATATATTTTCAAATATAATGACCAAAAGGTACATACTGCATTCTTTAGAAACTTTTCAATTATCCGGTTTTCCATTTTTCTTGTTGTATTTTAATATGCTCTTG-CTTT----TTTGTCATCTAATTTATTTGTCTTTTCAAAGAAACAATTTTTTGGATTTATTGAAAAATTCCATTGCTGTTGGGATGGGAGAAGATTAAATC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1287 565 - 21985 AACA------------------------------ACTA--------------------------------------------GTCTTCAAAGTTTGG---------------------TTTATAATTTT------TAATGGTGTTTATTTTTAACAAAATTGGTGGAGTTTTTTTT----CTTTGTACATTGATTTTTCTTTTGGTTTTCAGTTGTTTTAAGAAATAAATGGAGGG-AGAGATATGCTTCCTTTGCTCCCATTAACCAAAAGAATAGTTTGAACAACAC--------------AGGAATTAACTTTTCCATTAAGTTTCAGAGGACCTGCTTGAGACA-CAGCTGGGCCTTGAGCTTTTAAAGGTGCTATAACTTTACACCGGTTTCATTTTTTTCTATTGTTGGTATCTTCAAATGTTCTCATTTCTCTAGATTTATTTTTATAGTTAAATTTTCCCTAAAAAATTAACCTCTTCATATATATTTTCAAATATAATGACCAAAAGGTACATATTACATTCTTTTGAAa-ttttcaattatccagttttccatttttcttgttatattttAATAGGCTCTCT-CTTT----TTTGTCATCTAATTTGTTTGTCTTTTCAAAGAAA-AATTTTTTGGATTTATTGAAAAATTCCATTGCTGTTGGGATGGGAGAAGATTAAATC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67497026 566 - 121039945 AAAA------------------------------ACTA--------------------------------------------GTCTTCAAAGtttgg---------------------tttagaatttt------taatggtgtttatttttaacaaaattggtggagttttttt-----ctttgtacattgatttttcttttggttttcagttgttttaagaaataaacagaggg-agagatatgcttcctttgctcccattaaccaaaagaatagtttgaacaacac--------------aggaattaacttttccattaagtttaagaggacctgcttgagaca-cagctgggccttgagcttttaaaggtgctataactttatacctgtttcatttttttctactgttggtatcttcaaatgttctcatttccctagatttatttttatagttaaattttccctaaaaaattaacctcttcatatatattttcaaatataatgaccaaaaggtacatactgcattcttttGAAGGTTTTCAATTATCCAGTTTTCCATTTTTCTTGTCATATTTTAATATGCTCCTG-CTTT----TTTGTCATCTAATTTATTTGTCTTTTCAAAGAAACAATTTTTTGGATTTATTGATAAATTCCATTGCTGTTGGGATGGGAGAAGATTAAATC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23405197 561 + 169600520 AACA------------------------------ACTA--------------------------------------------GTCCTCAAAGTTTGG---------------------TTTAGAATTTT------TAATGGTGTTTATTTTTAACAAAATTGGTAGAGTTTTTTT-----CTTTGTACATTGATTTTTCTTTTGGTTTTCAGTTGTTTTAAGAAATAAATAGAGGG-AGAGATATGCTTCCTTTGCTCCCATTAACCAAAAGAATAGTTTGAACAACAC--------------AGGAATTAACTTTTCCATTAAGTTTAAGAGGACCTGCTTGAGACA-CAGCTGGGCCTTGAGCTTTTAAAGGTGCTACAACTTTATACCTGTTACA-TTTTTTCTATTGTTGGTATCTTCAAATGTTCTCATTTTCCTAGATTTATTTTTATAGTTAAATTTTCCCTAAAAAATTAACCTCTTCATATATATTTTCAAATATAATGACCGAAAGGTACATATTGCATTCTTTTGAAAATTTTCAATTATCCAGTTTTTCATTTTTCTTGTTGTATTTTAATATGCTCTCT-CTTT----TTTGTCATCTA----ATTTGTCTTTTCAAAGAAACAATTTTTTGGATTTATTGAAAAATCCCATTGCTGTTGGGATGGGAGAAAATTAAATC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24009176 561 + 171882078 AACA------------------------------ACTA--------------------------------------------GTCCTCAAAGtttgg---------------------tttagaatttt------taatggtgtttatttttaacaaaattggtagagttttttt-----ctttgtacattgatttttcttttggttttcagttgttttaagaaataaatagaggg-agagatatgcttcctttgctcccattaaccaaaagaatagtttgaacaacac--------------aggaattaacttttccattaagtttaagaggacctgcttgagaca-cagctgggccttgagcttttaaaggtgctacaactttatacctgttaca-ttttttctattgttggtatcttcaaatgttctcattttcctagatttatttttatagttaaattttccctaaaaaattaacctcttcatatatattttcaaatataatgaccgaaaggtacatattgcattcttttgaaaattttcaattatccagtttttcatttttcttgttgtattttaatatgctctct-cttt----tttgtcatcta----atttgtcttttcaaagaaacaattttttggatttattgaaaaatccCATTGCTGTTGGGATGGGAGAAAATTAAATC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13254312 561 - 40200012 AACA------------------------------ACTA--------------------------------------------GTCCTCAAAGTTTGG---------------------TTTAGAATTTT------TAATGGTGTTTATTTTTAACAAAATTGGTAGAGTTTTTTT-----CTTTGTACATTGATTTTTCTTTTGGTTTTCAGTTGTTTTAAGAAATAAATAGAGGG-AGAGATATGCTTCCTTTGCTCCCATTAACCAAAAGAATAGTTTGAACAACAC--------------AGGAATTAACTTTTCCGTTAAGTTTAAGAGGACCTGCTTGAGACA-CAGCTGGGCCTTGAGCTTTTAAAGGTGCTACAACTTTATACCTGTTACA-TTTTTTCTATTGTTGGTATCTTCAAATGTTCTCATTTTCCTAGATTTATTTTTATAGTTAAATTTTCCCTAAAAAATTAACCTCTTCATATATATTTTCAAATATAATGACCGAAAGGTACATATTGCATTCTTTTGAAAATTTTCAATTATCCAGTTTTTCATTTTTCTTGTTGTATTTTAATATGCTCTCT-CTTT----TTTGTCATCTA----ATTTGTCTTTTCAAAGAAACAATTTTTTGGATTTATTGAAAAATCCCATTGCTGTTGGGATGGGAGAAAATTAAATC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3242131 561 + 7633303 AACA------------------------------ACTA--------------------------------------------GTCCTCAAAGTTTGG---------------------TTTAGAATTTT------TAATGGTGTTTATTTTTAACAAAATTGGTAGAGTTTTTTT-----CTTTGTACATTGATTTTTCTTTTGGTTTTCAGTTGTTTTAAGAAATAAATGGAGGG-AGAGATATGCTTCCTTTGCTCCCATTAACCAAAAGAATAGTTTGAACAACAC--------------AGGAATTAACTTTTCCATTAAGTTTAAGAGGACCTGCTTGAGACA-CAGCTGGGCCTTGAGCTTTAAAAGGTGCTACAACTTTATACCTGTTACA-TTTTTTCTATTGTTGGTATCTTCAAATGTTCTCATTTTCCTAGATTTATTTTTATAGTTAAATTTTCCTTAAAAAATTAACCTCTTCATATATATTTTCAAATATAATGACCAAAAGGTACATACTGCATTCTTTTGAAAATTTTCAATTATCCAGTTTTTCATTTTTCTTGTTGTATTTTAATATGCTCTCT-CTTT----TTTGTCATCTA----ATTTGTCTTTTCAAAGAAACAATTTTTTGGATTTATTGAAAAATCCCATTGCTGTTGGGATGGGAGAAAATTAAATC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21943288 566 - 58131712 AACA------------------------------ACTA--------------------------------------------Gtgctcaaaatttgg---------------------tttagaatttt------taatggtgtttattttcaacaaaattggtagagttctttt-----ctttgtacattgatttttcttttggttttcagttgttttaagaaataaatggaggg-agagatatgcttcctttgctcccattaaccaaaagaatagtttgaacaacac--------------aggaattaacttttccattaagtttaagaggatctgcttgagaca-caactgggccttgagcttttaaaggtgctacaactttatacctgttacatttttttctattgttggtatcttcaaatgttctcatttacctagatttatttttatagttaaattttccctaaaacattaacctcttcatatatattttcaaatataatgaccaaaagttacatattgcattcttttgaaaattttcaattatccagtttttcatttttcttgttgtattttaatatgctctct-cttt----tttgtcatctaatttatttgtcttttcaaagaaacaattttttggatttattgaAAAATTCCATTGTGGTTGGGATGGGAGAAAAGTAAATC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 38189 561 + 2620224 AACA------------------------------ACTA--------------------------------------------GTCCTCAAAGTTTGG---------------------TTTAGAATTTT------TAATGGTGTTTATTTTTAACAAAATTGGTAGAGTTTTTTT-----CTTTGTACATTGATTTTTCTTTTGGTTTTCAGTTGTTTTAAGAAATAAATAGAGGG-AGCGATATGCTTCCTTTGCTCCCATTAACCAAAAGAATAGTTTGAACAACAC--------------AGGAATTAACTTTTCCATTAAGTTTAAGAGGACCTGCTTGAGACA-CAGCTGGGCCTTGAGCTTTTAAAGGTGCTACAACTTTATACCTGTTACA-TTTTTTCTATTGTTGGTATCTTCAAATGTTCTCATTTTCCTATATTTATTTTTATAGTTAAATTTTCCCTAAAAAATTAACCTTTTCATATATATTTTCAAATATAATGACCGAAAGGTACATATTGCATTCTTTTGAAAATTTTCAATTATCCAGTTTTTCATTTTTCTTGTTGTATTTTAATATGCTCTCT-CTTT----TTTGTCATCTA----ATTTGTCTTTTCAAAGAAACAATTTTTTGGATTTATTGAAAAATCCCATTGCTGTTGGGATGGGAGAAAATTAAATC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2220526 564 + 10629787 AACA------------------------------ACTA--------------------------------------------GTCCTCAAAGTCTGG---------------------TTTAGAATTTT------TAATGGTGTTTATTTTTAACAAAATTGGT--AGTTTTTTT-----CTTTGTACATTGATTTTTCTTTTGGTTTTCAGTTGTTTTAAGAAATAAATGGAGGG-AGAGATATGCTTCCTTTGCTCCCATTTACCAAAAGAATAGTTTGAACAAGGC--------------AGGAATTAACTTTTCCATTAAGTTTAAGAGGACCTGCTTGAGACA-CAGCTGGACCTTGAGCTTTTAAAGGTGCTACAACTTTATACCTGTTACATTTTTTTCTATTTTTGGTATCTTCAAATGTTCTCATTTTCCTAGATTTATTTTTATAGTTAAATTTTCCCTAAAAAATTAACCTCTTCATATATATTTTCAAATATAATGACCAAAAGGTACATATTGCATTCTTTTGAAaattttcaattatccagtttttaatttttcttgttgtattttaatATGCTCTCT-CTTT----TTTCTCATCTTATTTATTTGTCTTTTCAAAGAAACAATTTTTTGGGTTTATTGAAAACTTCCATTGCTGCTGGGATGGGAGAAAATTAAATC i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10574712 568 - 21366645 AACA------------------------------ACTA--------------------------------------------GTCATCAAAGtttgg---------------------tttagagtttt------tcattgtgtttatttttaacaaaattggt-gaatattttt-----atttgtacatttagttttcttttggtttttagttgttttaaaaaataaatggaagg-agagatatgcttcccttattctcattaatgaaaagaatagtttgaacaacac--------------aggaattaacttctccattaagtttaagagaacctgcttgagaca-caactgggccttgagcttttaaaggtgatatacctttacacctttttca-ctttttctattgtcggtatcttcaaatgttctcatttctctagatttattttcatagtaaaatttttcctgaaaaattaacctcttcatatatattttcaaatataatgaccaaaaggtacatattacattcttttgaaaattttcaattatccagtttcccattttttctgttgtattttaatatgctctctatttttttgtttgtaatctaatttatttgtctttttaaagaaacaat-ttttggatttactgaAAAATTCCATTGCTGTTGAGGCAGGAGAATATTAAATC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3725516 566 - 13033340 AACA------------------------------ACTA--------------------------------------------GTCATCAAAGTTTGG---------------------TTTAGAGTTTT------TAATTGTGTTTATTTTTAACAAAATTGGT-GAAtattttt-----atttgtacatttagttttcttttggtttttagttGTTTTAAGAAGTAAATGGAAGG-AGAGATATGCTTCCCTTGTTCCCATTAATTAAAAGAATAGTTTGAACAACAC--------------AGGAATTAACTTCTCCATTAAGTTTAAGAGGACCTGCTTGAGACA-CAGCTGGGCCTTGAGCTTTTAAAGGTGATATAACTTTACACCTTTTTCA-CTTTTTCTATTGTTGGTATCTTCAAATGTTCTCATTTCTCTAGATTTATTTTCATAGTAAAATTTTTCCTGAAAAATTAACCTCTTCATATATATTTTCAAATATAATGACCAAAAGGTACATATTACATTCTTCTGAAAATTTTCAATTATCTAGTTTCCCA-TTTTTCTGTTGTATTTTAATATGCTCTCT-CTTTTTTGTTTGTCATCTAATTTATTTGTCTTTTCAAAGAAACAAT-TTTTGGATTTACTGAAAAATTCCATTGCTGTTGAGACAGGAGAATATTAAATC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5217708 566 + 11604778 AACA------------------------------ACTA--------------------------------------------ATCTTCAAAGTTTGG---------------------TTTAGAGTTTT------TAATTGTGTTTATTTTTAACAAAATTGGT-GAATGTtttt-----atttgtacatttagttttattttggttttcagttGTTTTAAGAAATAAATGGAAGG-AGATATATGCTTCCCTTGTTCCCATTAGTGAAAAGAATAGTTTGAACAACAC--------------AGGAATTAACTTCTCCATTAAGTTTAAGAGGACCTGTTTGAAACA-CAGCTGGGTCTCGAGCTTTTAAATGTGATATAACTTTAGACCTTTTTCA-CTTTTTCTATTGTTGGTATCTTCAAATGTTCTCATTTCTCTAGATTTATTTTCATAGTAAAATTTTTCCTGAAAAATTAACCTCTTCATATATATTTTCAAATATAATGACCAAAAGGTACATATTGCATTCTTTTGAAAATTTTCAATTATCCAGTTTCCCA-TTTTTCTGTTGTATTTTAATATGCTCTCT-CTTGTTTGTTTGTCATCTAATTTATTTGTCTTTTCAAAGAAACAAT-TTTTGGATTTACTGAAAAATTCCGTTGCTATTGGGACAGGAGAAGATTAAATC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 126222 684 + 36342412 AGTATGAGTAACTCATGGAAGGTGACTGGAAAACGCTACCTGGAAGAAAGTGATTATCCTAAAGTAATAGATTAAAGGATGTGTTCATAAAGGATGGGTTCTTTCAAGGATATAGTCCTTTAGAGTTCTAGTGGTCCATGGTGTTTATATTTAATAAAATTGGTGGGATTTTTTTTGTTTGTTTTTCCACTTATTTCCCTTTTGATTTT-AGTTGTTTTAAGAAAGAAATGAAAGGCAAAGATGCATTTCCTCTGTTCTTATTAACAGACAGAACAGTTTGCACAACACAAACCGTTTAACAAAAAAGTTAACTTTTCCATTAACTTTGATGAAACCTACTTGGGGCATCATCTGGGCCTCAAGCATTC-AAGGTGAAATGACTTTACAACTTTTTTA-TTACCTCTATTTTTGATATTGTCAAATGTTCTCATTTCTCTCACTTTATTTTTATAACTAAATTTTCCTT-AGAAATTAACACCTCCATAGGTATTTTCAAATATGTTGACCAAAATGGATGCACTGCATTCTTT-GAAAATTTTAAATTATCCAGTTTCCCATTTTTCTTGTGATATATTAATATATTCTTT-CTTT--TGCTTGTCATTTGATTTATTTGTCTTTCCAAAG-AACCCTTTCCCGGGTTTATTGAAAAATTCCATTGCTGTTGGTGTGGGAGAAGATTAAATT i otoGar3.GL873530 C 0 C 0 e canFam3.chr30 13405216 4140 + 40214260 I e dasNov3.JH579377 1802484 460 - 2868945 I e calJac3.chr10 24181774 1302 + 132174527 I a score=2447792.000000 s hg38.chrUn_KI270749v1 7275 285 + 158759 CTTAGAATAATAggccaggcatggtagctcacacctgtaatcccagcactttgggaggtcaaagtgtgtggatcacttgaggacaggggttcatggccagcctggccgatatggtgaaaccccttctctactaaaaacacaaaaatacaaaaattagccgggcatggtggcatgtgcctgtagtctcagctacttgtgaaactgaggcacaagaaatcactcaaacccgggaggtggaggttgtattgagccaagattgtgccactgcactccagcctgggtgac s panTro5.chr1 101788713 285 - 228573443 CTTAAAATAATAggccaggcatggtggctcacacctgtaatcccagaactttggaaggccgaggtgggtggatcacttgaggacaggggttcaagaccaccctggccaatatggtgaaaccccttctctactaaaaacacaaaaatacaaaaattagtcgggcatggtggcatgtgcctgtagtctcagctacttgcaaaactgaagcacaagaaatcactcaaacccgggaggtggaggttgtattgagccaagattgtgccactgcactccagcctgggtgac i panTro5.chr1 C 0 C 0 s panPan2.chr15 44367053 285 + 99763055 CTTTAAATAATAggccaggcatggtggctcacacctgtaaccccagcactttgggaggctgaggtgggtggatcacttgaggccaggggttcaaggccagcctggccgatatggggaaaccccttctctactaaaaatacaaaaatacaataattagccaggcatggtggtacgtgcctgtagtctcagctacttgggaaactgaggcacaagaaatcactcaaacccgggaggcagaggttgtagtgagccaagattgtgccactgcactccagcctgggtgac i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1852 283 - 21985 CTTAAAATAATAggccaggcatggtggctcacacctgtaatcccagcactttgggagg-cgaagtgggtggatcacttgaggacaggggttcaaggccagcctggccgatatggtgaaaccccttctctactaaaaacacaaaaatacaaaaattag-cgggcatggtggcatgtgcctgtagtctcagctacttgtgaaactgaggcacaagaaatcactcaaacccgggaggtggaggttgtattgagccaagattgtgccactgcactccagcctgggtgac i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67497592 279 - 121039945 CTTTAAATAATAggccaggcatggtgtctcacacctgtaaccccagcactttgggaggccgaggtgggcagatcacttgaggccaggggttcaaggccagcctggccgatctggtgaaaccccttctctactaaaaat------atacaaaaattagccaggcatggtggtacgtgcctgtagtctcagctacttgggaaactgaggcacaagaaatcactcaaacccgggaggcggaggttgtagtgagccaagattgtaccactgcactccagcctgggtgat i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23405758 285 + 169600520 CTTTAAATAATAggccaggcatggtggcttatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacttgaggccaggggttcaaggccagcctggccaatatggtgaaaccccttctctactaaaaatacaaaaatacaaaaattagccaggcgtggtggtacgcacctgtaatctcagctacttgggaaactgaggcacaagaaatcactcaaacccgagaggcggaggttgtagtgagccaagattatgccactgccctccagtctgggtgac i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24009737 285 + 171882078 CTTTAAATAATAggccaggcatggtggcttatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacttgaggccaggggttcaaggccagcctggccaatatggtgaaaccccttctctactaaaaatacaaaaatacaaaaattagccaggcgtggtggtacgcacctgtaatctcagctacttgggaaactgaggcacaagaaatcactcaaacccgagaggcggaggttgtagtgagccaagattatgccactgccctccagtctgggtgac i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13254873 285 - 40200012 CTTTAAATAATAggccaggcatggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacttgaggccaggggttcaaggccagcctggctaatatggtgaaaccccttctctactaaaaatacaaaaatacaaaaattagccaggcgtggtggtacgcacctgtaatctcagctacttgggaaactgaggcacaagaaatcactcaaacccaagaggcagaggttgtagtgagccaagattgtgccactgccctccagtctgggtgac i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3242692 285 + 7633303 CTTTAAATAATAggccaagcatggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacttgaggccaggggttcaaggccaacctggccaatatggtgaaaccccttctctactaaaaatacaaaaatacaaaaattagccaggcgtggtggtacgcacctgtaatctcagctacttgggaaactgaggcacaagaaatcactcaaacccgagaggcggaggttgtagtgagccaagattgtgccactgccctccagtctgggtgac i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21943854 285 - 58131712 CTTTAAATAATAggccaggcatggtggctcatgcctgtaatgccagcactttgggaggccgaggtgggcggatcacttgaggccaggggttcaaggccagcctggctgatatggtgaaaccccttctctactaaaaatacaaaaatacaaaaattagccaggcgtggtggtacgtgcctgtaatctcagctacttgggaaactgaggcacaagaaatcactcaaacccaagaggcggaggttgtagtgagctaagattgtgccactgccctccagcctgggtgac i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 38750 285 + 2620224 CTTTAAATAATAggccaggcatggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacttgaggccaggggttcaaggccagcctggccaatatggtgaaaccccttctctactaaaaatacaaaaatacaaaaattagccaggcgtggtggtacgcacctgtaatctcagctacttgggaaactgaggcacaagaaatcactcaaacctgagaggcggaggttgtagtgagccaagattgtgccactgccctccagtctgggtgac i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2221090 285 + 10629787 CTTTAAATAATAggccaggcatggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcggatcacttgaggccaggggctcaaggccagcctggccgatatggtgaaaccccttctctactaaaaatacaaaaatacaaaaattagccaggcgtggtggtacgtgcctgtagtctcagctacttgggaaactgaggcacaagaaatcactcaaacccgagaggcggaggttgtagtgagccaagattgtgccactgccttccagcctgagtgac i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10575280 285 - 21366645 CTTTAAATAACAggccaggcatggtggctcacacctgtaatttcagcactttgggaggctgaagttggtggatcacttgaggtctggggtttaagaccagtttggacaacatggtgaaatcccatctccactaaaaatacaaaaatacaaaaattagccaggcatggtggtgtgtggctgtagtcctagctacttgggaagctcaggcacaagaaatcacttgaacccaggaggcagaggttgcagtaagccacgattgtaccactgcactccagcctggatgac i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3726082 285 - 13033340 CTTTAAATAACAggccaggcatggtggcttacgcctgtaatcccagcactttgggagactgaagtgggtggatcacgtgaggtcaggggtttaagaccagtctggacaacatggtgaaaccccatctccactgaaaatacaaaaatacaaaaattagctaggcatggtggtgtgtggctgtagtcctagctacttgggaagctcaggcacaagaaatcacttgaacccaggaggcagaggtttcagtaagccacgattgtgccactgcactccagcctggatgac i cebCap1.NW_016107324v1 C 0 I 11 s aotNan1.NW_018501505v1 5218274 285 + 11604778 CTTTAAATAATAggccaggcatggtggttcatgcctgtaatcccagcactttgggaggctgaagtgggtggatcacttgaggtcaggggtttaagaccagtctggccaacatggtgaaaccccatccccaataaaaatacaaaaatacaaaaattagccaggcatggttgtatgtggctgtagtcctagctacttgggaagctcaggcacaagaaatcacttgaacccaggaggcagaggttgcagtaagccatgattgtgccactgcactccagcctggatgac i aotNan1.NW_018501505v1 C 0 I 11 e otoGar3.GL873530 126906 0 + 36342412 C e canFam3.chr30 13405216 4140 + 40214260 I e dasNov3.JH579377 1802484 460 - 2868945 I e calJac3.chr10 24181774 1302 + 132174527 I a score=104978.000000 s hg38.chrUn_KI270749v1 7560 59 + 158759 agagcaacactctgtctc-aaaaaaacaaacaaacaaacaaaaacaaaacaaaacaaaaa s panTro5.chr1 101788998 50 - 228573443 agagcaagactctgtctc-aaacaaacaaacaaacaaaaaaaaa---------acaaaAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44367338 28 + 99763055 agagcaagactctgtctc-aaa-------------------------------aaaaaaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2135 57 - 21985 agagcaagactctgtctc-aaa-aaacaaacaaacaaacaaaaacaaaCAAA-ACAAAAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67497871 31 - 121039945 agagcaagactctgtctc-aaaaaa----------------------------aaaaaaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23406043 27 + 169600520 agagcaagactctgtctc-aa--------------------------------aaaaaaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24010022 27 + 171882078 agagcaagactctgtcta-aa--------------------------------aaaaaaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13255158 27 - 40200012 agagcaagactctgtctc-aa--------------------------------aaaaaaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3242977 27 + 7633303 agagcaagactctgtctc-aa--------------------------------aaaaaaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21944139 28 - 58131712 agagcaagactctgtctcaaa--------------------------------aaaaaaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 39035 25 + 2620224 agagcaagactctgtctc-----------------------------------aaaaaaa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2221375 25 + 10629787 agagcaagactctgtctc-----------------------------------aaaaaaa i colAng1.NW_012121598v1 C 0 C 0 e otoGar3.GL873530 126906 0 + 36342412 C e aotNan1.NW_018501505v1 5218559 11 + 11604778 I e cebCap1.NW_016107324v1 3726367 11 - 13033340 I e canFam3.chr30 13405216 4140 + 40214260 I e dasNov3.JH579377 1802484 460 - 2868945 I e saiBol1.JH378136 10575565 0 - 21366645 C e calJac3.chr10 24181774 1302 + 132174527 I a score=16199.000000 s hg38.chrUn_KI270749v1 7619 4 + 158759 aGAA s panTro5.chr1 101789048 4 - 228573443 AGAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44367366 4 + 99763055 aaaT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2192 4 - 21985 AGAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67497902 4 - 121039945 aaaT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23406070 4 + 169600520 aaaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24010049 4 + 171882078 aaaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13255185 4 - 40200012 aaaT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3243004 4 + 7633303 aaaT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21944167 4 - 58131712 aaaT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 39060 4 + 2620224 aaaT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2221400 4 + 10629787 aaaT i colAng1.NW_012121598v1 C 0 C 0 s dasNov3.JH579377 1802944 4 - 2868945 AAAT i dasNov3.JH579377 I 460 C 0 e otoGar3.GL873530 126906 0 + 36342412 C e aotNan1.NW_018501505v1 5218559 11 + 11604778 I e cebCap1.NW_016107324v1 3726367 11 - 13033340 I e canFam3.chr30 13405216 4140 + 40214260 I e saiBol1.JH378136 10575565 0 - 21366645 C e calJac3.chr10 24181774 1302 + 132174527 I a score=1446281.000000 s hg38.chrUn_KI270749v1 7623 227 + 158759 CTTTAAAT--AATAGTATATTATAATTTTGCAGATTATAAGATCAATAGATGTTTATTGTAAAATGCACAAACAGTGCAATATTTCTTAAAGTAGACAGTGAAATACTTCATGTTGCCATGTTTCTCCAAGAGGTACTATTGGGCCTTCATAAGAAGcaattcttccttatacaggactgtttgtctcaatgcactg--tttggcccaatgcatgctgcatgtgatctctg s panTro5.chr1 101789052 224 - 228573443 CTTTAAAT--AATAGTATATCGT---TTTGCAGATTATAAGACCAACAGATATTTATTGTAAAATGCACAAATAGTGCAACATTTCTTAAAGTAGACAGTGAAATACTTCATGTTGCCATGTTTCTCCAAGAGGTACTATTGGGCCTTCATATGAAGCAATTCTTCCTTGTATAGGACTGTTTGTCTCAATGCACTG--TTTGGCCCAATGCATGCTGCATGTGATCTCTA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44367370 224 + 99763055 CTTTAAAT--AATAGTACATTGT---TTTGCAGATTATAAGATCAATAGATATTTATTGTAAAATGCACAAATAGTGCAACCTTTCTTAAAGTACACAGTGAAATACTTCATGTTGCCATGTTTCTCCAAGAGATACTATTGGGCCTTCATACTAAGcaattcttccttatataggactgtttgtctcaatgcactg--tttgacccaatgcctgctgcatgagatctcta i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2196 223 - 21985 CTTTAAAT--AATAGTATATTGT---TTTGCAGATTATAAGATCAATAGATATTTATTGTAAAATGCACAAATAGTGCAACATTTCTTAAAGTAGACCGTGAAATACTTCATGTTGCCATGTTTCTCCAAGAGGTACTATTGGGCCTTCATA-GAAGCAATTCTTCCTTATATAGGACTGTTTGTCTCAATGCactg--tttggcccaatgcatgctgcatgtgatctcta i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67497906 224 - 121039945 CTTTAAAT--AATAGTATATTGT---TTTGCAGATTATAAGATCAATAGATATTTATTGTAAAATGCACAAATAGTGCAACCTTTCTTAAAGTAGACAGTGAAATACTTCATGCTGCCATGTTTCTCCAAGAGGTACTATTGGGCCTTCATACTAAGcaattcttccttatgtaggactgtttgtctcaatgcactg--tttgacccaatgcatgctgcatgtgatctcta i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23406074 224 + 169600520 aTTTAAAT--AACAGTATATTGT---TTTGCAGATTATAAGATCAATAGATATTTATTGTAAAATGCACAAATAGTGCAACATTTCTTAAAGTAGACAGTGAAGTACTTCATGTTGCCATGTTTCTCCAAGAGGTACTATTGGGCCTTGATACTAAGcaattcttccttatataggactgtttggctcaatgcactg--tttggcccaatgcatgctgcatgtgatctcta i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24010053 224 + 171882078 TTTTAAAT--AACAGTATATTGT---TTTGCAGATTATAAGATCAATAGATATTTATTGTAAAATGCACAAATAGTGCAACATTTCTTAAAGTAGACAGTGAAGTACTTCATGTTGCCATGTTTCTCCAAGAGGTACTATTGGGCCTTGATACTAAGCAATTCTTCCTTATATAGGACTGTTTGGCTCAATGCACTG--TTTGGCCCAATGCATGCTGCATGTGATCTCTA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13255189 224 - 40200012 CTTTAAAT--AACAGTATATTGT---TTTGCAGATTATAAGATCAATAGATATTTATTGTAAAATGCACAAATAGTGCAACATTTCTTAAAGTAGACAGTGAAGTACTTCATGTTGCCATGTTTCTCCAAGAGGTACTATTGGGCCTTGATACTAAGcaattcttccttatataggactgtttggctcaatgcactg--tttggcccaatgcatgctgcatgtgatctcta i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3243008 226 + 7633303 CTTTAAAT--AATAGTATATTGT---TTTACAGATTATAAGATCAATAGATATTTATTGTAAAATGTACAAATAGTGCAACATTTCTTAAAGTAAACAGTGAAGTACTTCATGTTGCCATGTTTCTCCAAGAGGTACTATTGGGCCTTGATACTAAGcaattcttccttatataggactgtttcgctcaatgcactgtttttggcccaatgcatgctgcatgtgatctcta i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21944171 224 - 58131712 CTTTAAAT--AATAGCATATTGT---TTTGCAGATTATAAGATCAATAGATATTTATTGTAAAATGCACAAATAGTGCAACATTTCTTAAAGTAGACAGTGAAGTACTTCATGTCGCCATCTTTCTCCAAGAGGTACTATTGGGCCTTCATACTAAGCAATTCTTCCTTATATAGGACTGTTTGGCTCAATGCACTG--TCTGGCCCAATGCATGCTGCATGTGATCTGTA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 39064 224 + 2620224 GTTTAAAT--AATAGTATATTGT---TTTGCAGATTATAAGATCAATAGATATTTATTGTAAAATGCACAAATAGTGCAACATTTCTTAAAGTAGACAGTGAAGTACTTCATGTTGCCATGTTTCTCCAAGAGGTACTATTAGGCCTTGATACTAAGcaattcttccttatataggactgtttggctcaatgcactg--tttggcccaatgcatgctgcatgtgatctcta i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2221404 224 + 10629787 CTTTAAAT--AGTAGTATATTGT---TTTGCAGATTATAAGATCAATAGATATTTATTGTAAATTGCACAAATACTGCAACATTTCTTAAAGTAGACAGTGAAGTACTTCATGTTGCCATGTTTCTCCAAGAGGTACTATTGGGCCTTCATACTAAGcaattcttccttatataggactgtttggctcagtgcactg--tttggcccaatgtatgctgcatgtgatctcta i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 126906 207 + 36342412 CTTTAAAT--GAGAGTATATATT---TTTTGAGATAATAGAAGTAATAGATGGTTGTTGTAAAATTCACAAGTAGTACAAAATGTATTAACATAGACAGTGAAATACTTCATGCTACCATGTTTATCCATGGGATACTATTGGGCCTTCAGACTAAACAATTGTTCCTTGTACGGGACTA-------------------TCTGCCCTACTGCAGACTGCTCATTATCGCTA i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1802948 167 - 2868945 CCTTAAATGGAAGAATATTTTTT---TTTGCAAATTAGAAGTGCAATACATGCGTACTGTAAAATATGCAA-TAGTATAGTGTGT------------------------------GTCATGTTTCTCCAAGGGGTACTAAGGGCCCATCAGACTAAACAATGCTTCCTTGTGCAGA---------CTCAGTGGAGGA--T-------------------ATGCTATCCCTG i dasNov3.JH579377 C 0 C 0 e aotNan1.NW_018501505v1 5218559 11 + 11604778 I e cebCap1.NW_016107324v1 3726367 11 - 13033340 I e canFam3.chr30 13405216 4140 + 40214260 I e saiBol1.JH378136 10575565 0 - 21366645 C e calJac3.chr10 24181774 1302 + 132174527 I a score=71536.000000 s hg38.chrUn_KI270749v1 7850 10 + 158759 ccctttactt s panTro5.chr1 101789276 10 - 228573443 CACTTTACTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44367594 10 + 99763055 ccctctagtt i panPan2.chr15 C 0 I 1 s gorGor5.CYUI01005903v1 2419 10 - 21985 ccctttactt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67498130 10 - 121039945 ccctctactt i nomLeu3.chr6 C 0 I 1 s rheMac8.chr7 23406298 10 + 169600520 ccctctactt i rheMac8.chr7 C 0 I 1 s macFas5.chr7 24010277 10 + 171882078 CCCTCTACTT i macFas5.chr7 C 0 I 1 s macNem1.NW_012010577v1 13255413 10 - 40200012 ccctctactt i macNem1.NW_012010577v1 C 0 I 1 s cerAty1.NW_012000887v1 3243234 10 + 7633303 ccctctactt i cerAty1.NW_012000887v1 C 0 I 1 s chlSab2.chr26 21944395 10 - 58131712 CCCTCTACTT i chlSab2.chr26 C 0 I 1 s manLeu1.NW_012108674v1 39288 10 + 2620224 ccctctactt i manLeu1.NW_012108674v1 C 0 I 1 s colAng1.NW_012121598v1 2221628 10 + 10629787 ccctttactt i colAng1.NW_012121598v1 C 0 I 1 s saiBol1.JH378136 10575565 10 - 21366645 CCCTCCACTT i saiBol1.JH378136 C 0 I 1 s otoGar3.GL873530 127113 10 + 36342412 ACCTCTACTT i otoGar3.GL873530 C 0 I 2 e aotNan1.NW_018501505v1 5218559 11 + 11604778 I e cebCap1.NW_016107324v1 3726367 11 - 13033340 I e canFam3.chr30 13405216 4140 + 40214260 I e dasNov3.JH579377 1803115 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=3060459.000000 s hg38.chrUn_KI270749v1 7860 325 + 158759 gtaagtgctcatcatgtctccatcatcgatacaaccaaaaataacctacatttccaaaatcactccaaaggaatggtcctgAGA--GAGTTGAAAATTCTGAACTCCTCAGATTAGAT-----CTCT-ATTAAATAGTTGAAACAGTGAGCTAACTAATATTTGCAAAGCTGTTCATTATACAAGTTTA-AAAAAAATGCA--AAGATGGTAAAGACTTGAATTTTCAATAGATATGTTTTATAAAAA-TACTGGTAAAAATTAACATTTTACAGTCA----------------------------------TTTTAAA-TGACGGCAAGATATCCAATGTATTTTCAAATGAAA-TATCAGTTCACTACAAA s panTro5.chr1 101789286 320 - 228573443 GTAAGTGCTTGTCATGTCTCCATCATTGATACAACCAAAAATAACCTACATTTCCAAAATCACTCCAAAGGAATGGTCCTGAGAAAGAGTTGAAAATTCTCAACTCCTCAGATTA--------------TTAAATAATTGAACAAGTGTGCTAACTAATATTTGCAAAGCTGTTCATTATACAAGTTTA-TGAAAAATGCA--AAGATGGTAATGACTTAAATTTTCAATGGATATGTTTTATAAAAAATACTGGTAAAAATTAACATTTTACAGTCA----------------------------------ATTTAAA-TGACGGCAAGATATCCAATGTATTTTCGAATGAAA-TATCAGGTCACTACAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44367605 324 + 99763055 gtaaatgcttgtcatgtccccatcattgatacaaccaaaaataacctacatttccaaaattactccagaggaatggtcctgAGAAAGAGTCGAAAGTTCTCAACTCCTCAGATTAGAT-----CTCT-ATTAAATAATTGAACAAGTGTG----CTAATATTTGTAAAGCTGTTCATTATACAAGTTTATAAAAAAATGCA--AAGATGGTAATGTCTTAAATTTTCAATAGATATGTTTTATAAAAA-TAATGGTAAAAATTAACATTTTACCGTCA----------------------------------TTTTAAA-TGATGGCAACATGTCCAATGTATTTTTGTATGAAA-TATCAGGTAACTACAAA i panPan2.chr15 I 1 C 0 s gorGor5.CYUI01005903v1 2429 327 - 21985 gtaagtgcttgtcatgtctccatcattgatacaaccaaaaataacctacatttccaaaatcactccaaaggaatggtcctgAGAAAGAGTTGAAAATTCTCAACTCCTCAGATTAGAT-----CTCT-ATTAAATAATTGAACAAGTGTGCTAACTAATATTTGCAAAGCTGTTCATTATACAAGTTTA-TAAAAAATGCA--AAGATGGTAATGACTTAAATTTTCAATAGATATGTTTTATAAAAA-TACTGGTAAAAATTAACATTTTACAGTCA----------------------------------TTTTAAA-TGACGGCAAGATATCCAATGTATTTTCGAATGAAA-TATCAGGTCACTACAAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67498141 328 - 121039945 gtaagtgcttgtcatgtccccatcattgttacagccaaaaataacctacatttccaaaatcactccaaaggaatggtcctgAGAAAGCGTCAAAAATTCTCAACTCCTCAGATTAGAT-----CTCT-ATTAAGTAATTGAACAAGTGCGCTAACTAATATTTGTAAAGCTGTTCATTATACAAGTTTATAAAAAACTGCA--AAGATGGTAATGTCTTAAATTTTCAATAGATACATTTTATAAAAA-TAATGGTAAGAATTAACATTTTACAGTCA----------------------------------TTTTAAA-TGATGGCAACATGTCCAATGTATTTTTGAATGAAA-TATCAGGTAACTACAAA i nomLeu3.chr6 I 1 C 0 s rheMac8.chr7 23406309 328 + 169600520 gtaagtgcttgtcatgtctccatcattgatacaaccaaaaataacctacatttccaaaatcacttcaaaggaatggtcctgAGAAAGACTTGAAAATTCTCAACTCCTCAGAGTGGAT-----CTCT-ATTAAATAATTGAACAAGTATGCTAACTAATATTTGCAAAGCTGTTCACTATACAAATTTATTAAAAAATGCA--AAGATGGTAATGTCTTAAATTTTCAATAGATATGTTTTATAAAAA-TGCTGGTAAAAATTAACATTTTACAGTCA----------------------------------TTTTAAA-TGATGGCAAGATGTCCAATGTATTTTTGAATGAAA-TGTCAGGTCATTACAAA i rheMac8.chr7 I 1 C 0 s macFas5.chr7 24010288 328 + 171882078 GTAAGTGCTTGTCATGTCTCCATCATTGATACAACCAAAAATAACCTACATTTCCAAAATCACTTCAAAGGAATGGTCCTGAGAAAGACTTGAAAATTCTCAACTCCTCAGAGTGGAT-----CTCT-ATTAAATAATTGAACAAGTATGCTAACTAATATTTGCAAAGCTGTTCACTATACAAATTTATTAAAAAATGCA--AAGATGGTAATGTCTTAAATTTTCAATAGATATGTTTTATAAAAA-TGCTGGTAAAAATTAACATTTTACAGTCA----------------------------------TTTTAAA-TGATGGCAAGATGTCCAATGTATTTTTGAATGAAA-TGTCAGGTCATTACAAA i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 13255424 328 - 40200012 gtaagtgcttgtcatgtctccatcattgatacaaccaaaaataacctacatttccaaaatcacttcaaaggaatggtcctgAGAAAGACTTGAAAATTCTCATCTCCTCAGAGTGGAT-----CTCT-ATTAAATAATTGAACAAGTATGCTAACTAATATTTGCAAAGCTGTTCACTATACAAATTTATTAAAAAATGCA--AAGATGGTAATGTCTTAAATTTTCAATAGATATGTTTTATAAAAA-TGCTGGTAAAAATTAACATTTTACAGTCA----------------------------------TTTTAAA-TGATGGCAAGATGTCCAATGTATTTTTGAATGAAA-TGTCAGGTCATTACAAA i macNem1.NW_012010577v1 I 1 C 0 s cerAty1.NW_012000887v1 3243245 328 + 7633303 gtaagtgcttgtcatgtctccatcattgatacaaccaaaaataacctacatttccaaaatcacttcaaaggaatggtcctgAGAAAGACTTGAAAATTCTCAACTCCTCAGAGTGGAT-----CTCT-ATTAAATAATTGAACAAGTATGCTAACTAATATTTGCAAAGCTGTTCACTATACAAATTTATTAAAAAATGCA--AAGATGGTAATGTCTTAAATTTTCAATAGATATGTTTTATAAAAA-TACTGGTAAAAATTAACATTTTACAGTCA----------------------------------TTTTAAA-TGATGGCAAGATGTCCAATGTATTTTTGAATGAAA-TGTCAGGTCATTACAAA i cerAty1.NW_012000887v1 I 1 C 0 s chlSab2.chr26 21944406 328 - 58131712 GTAAGTGCTTGTCATGTCTCCATCATTGATACAACCAAAAATAACCTACATTTCCAAAATCACTTCAAAGGAATAGTCCTGAGAAAGAGTTGAAAATTCTCAACTCCTCAGAGTGGAT-----CTCT-ATTAAATAATTGAACAAGTATGCTAACTAATATTTGCAAAGCTGTTCACTATACAAGTTTATAAAAAAATGCA--AAGATGGTAATGTCTTAAATTTTCAATAGATATGTTTTATAAAAA-TACTGGTAAAAATGAACATTTTACAGTCA----------------------------------TTTTAAA-TGATGGCAAGATGTGCAATGTATTTTTGAATGAAA-TGTCAGGTCACTACAAA i chlSab2.chr26 I 1 C 0 s manLeu1.NW_012108674v1 39299 328 + 2620224 gtaagtgcttgtcatgtctccatcattgatacaaccaaaaataacctacatttccaaaatcacttcaaaggaatggtcctgAGAAAGACTTGAAAATTCTCAACTCCTCAGAGTGGAT-----CTCT-ATTAAATAATTGAACAAGTATGCTAACTAATATTTGCAAAGCTGTTCACTATACAAATTTATTAAAAAATGCA--AAGATGGTAATGTCTTAAATTTTCAATAGATATGTTTTATAAAAA-TACTGGTAAAAATTAACATTTTACAGTCA----------------------------------TTTTAAA-TGATGGCAAGATGTCCAATGTATTTTTGAATGAAA-TGTCAGGTCATTACAAA i manLeu1.NW_012108674v1 I 1 C 0 s colAng1.NW_012121598v1 2221639 328 + 10629787 gaaagtgcttgtcatgtctccatcattgatacaaccaaaaataacctacatttccaaaatcacttcaaaggaatggtcctgAGAAAGAGTTGAAAATTATCAACTCCTCAGAGTGGAT-----CTCT-ATTAAATAATTGAACAAGTATGCTAACTAATATTTGCAAAGCTGTTCACTATACAAGTTTATAAAAAAATGCA--AAGATGGTAATGTCTTAAATTTTCAATAGATATGTTTTATAAAAA-TACTGGTAAAAATTAACATTTTACAGTCA----------------------------------TTTTAAA-TGATGGCAAGATGTCCAATGTATTTTTGAATGAAA-TGTCAGGTCACTACAAA i colAng1.NW_012121598v1 I 1 C 0 s saiBol1.JH378136 10575576 326 - 21366645 GTAAGTGCTTATCATGTCTCTGTCATTAATACAACCAAAAAGAACCTACATTTCGAAAATCACTCCAAAGGAATGGTCCTGAGAAAGAGTTGAAAACTCTCAACTCTTCAGTTTAGAT-----CCTT-ATGAAATAATTCAACAAGTGTGCTAATTAATATTTGCAAA-CTGTTCATTTTACAAGTCTAT-AAAAAATGCA--AAGTTGGTAATGTTTTAAATTTTCAATAGAAATGATTTATAAAAA-TACTGGTAAAAATTAACACTTAACAGTCA----------------------------------TTTTAAA-TGATGTAAAGATGTCCAACGTATTTTTGAATGAAC-TCTCAGGTCACTACAAA i saiBol1.JH378136 I 1 C 0 s cebCap1.NW_016107324v1 3726378 322 - 13033340 GTAAGTGCTTATCATGTCTCCGTCATACATACAACCAAAAAGAACCTACATTTCGAAAATCACTCCAAAGGAATGGTCCTGAGAAAGAGTTGAAAACTCTCAACTCTTCAGTTTAGAT-----CCTT-ATTAAATAATTGAACAAGTGTGC----TAATATTTGCAAAGCTGTTCATTATACAAGTTTAT-AAAAAATGCA--AAGTTGGT-ATGTTTTAAATTTTCAATAGAAATAATTTATTAAAA-TACTGGTTAAAATTAACACTTTACAGTCA----------------------------------TTTTAAA-TGATGGCAAGATGTCCAATGTATTTTTGAATGAAC-TATCAGGTCACTACAAA i cebCap1.NW_016107324v1 I 11 C 0 s aotNan1.NW_018501505v1 5218570 328 + 11604778 GTAAGTGCTTATCATGTCTCCATCATTAATACAACC-AAAAGAACTTACATTTCGAAAATCACTCCAAAGGAATGGTCCTGAGAAACAGTTGAAAACTCTCAACTCTTCAGTTTAGAT-----CCTTAATTAAATAATTGAACAAGTGTGCTAACTAATATTTGCAAAGCTGTTCATTATACAAGTTTATAAAAAAATGCA--AAGTTGGTAATATTTTAAATTTTCAATAGAAATAATTTATAAAAA-TACCGGTAAAAATTAACACTTTACAGTCA----------------------------------TTTTAAA-TGATGGCAAGATGTCCAATGTATTTTTGAATGAAC-TATCAGGTCACTACAAA i aotNan1.NW_018501505v1 I 11 C 0 s otoGar3.GL873530 127125 347 + 36342412 TAAAGTGC--------------TAATTCCTACAGCCCCGCATGGCCCGTTTTCACAAGAGCATTCTAAAGGAGTGATCCTGCGAAAGAGTTGAAAACTCTCAACTGCCTCAATTAGAT-----CCTT-CTTAAACAGTTGATTGTGCACGTTACCTAATATTTGTAAGGCTGTTTATAATTT--GTTTGT-GAAAAATGAAATAAAATGGTAACAGCTTAAATTTTCACCAGTTCTAATTTGTTTAAA-TGCAGGTAAAAACTGCGACTTTACAGTCATTTTAAAACAATGATTAAATGTGTAGTCATTTTTTTTTAAA-TAATGGTGAAATGTTTAATGCATTTTTGAATGAAA-CATTAGGTCACTGCACA i otoGar3.GL873530 I 2 C 0 s dasNov3.JH579377 1803115 313 - 2868945 GTAAATGTTAGTCATGTCCCAGTCATTGACACAACCAACAATA--CCATGTTTCTAAAGGCACTCTAAGGGACTG----------------AAAAACACTCAATTCTTCTTCTTAGGTGTTAACCCT-ATTAAATAATTGTACAAGT-TGC-AACAAATATGTCCAAGGCTGTTCGTTTCACAATTGCAT-ATAAAAAGAA--AAAATGAAAATACCCTAAATTTTCATCAGTTATGCTTCATTTAAA-TGTAGGT-AAAATTAATGCTTTGTAGTCA----------------------------------TTTAAAACTAATGGTAAGATGTTAAATGTATTTTGGAGTGAAAGTCATAGGTAATTACAAA i dasNov3.JH579377 C 0 C 0 e canFam3.chr30 13405216 4140 + 40214260 I e calJac3.chr10 24181774 1302 + 132174527 I a score=3711365.000000 s hg38.chrUn_KI270749v1 8185 420 + 158759 TCATAATTAGCATAATCTCA-CTTTT--AAAAAAGTACACA--TATGCGTTTTATGAGTGAGAGTATTTGAGTTCTAATT-AAATTGTTGTCGGTGGATTTCTAAGGAATAGAGGAAATCATGAGGCAAGTGGAATTGTAGAGAGAGGAAGATTTCAATTTACATTTAATTCACTCCCGGAGTGTTTGAGTTTTTGTAATAAAACATTATAAAATGTCATATCATTTACAGTATGATCACTTATAAACTTTCATTTCACTTAAAAGGAAATTTTTAAAAAGAGGACTACCAAATAACTACTGCAGCCATTGTAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTTAATGTGTGCCTGCTAGGTCA----------AGACCCA----GATTTGACACCGTGTACAGTCAGCATATAAGTATCATAACAGAAGATT s panTro5.chr1 101789606 420 - 228573443 TCATAATTAGCATAATCCCA-TTTTT--AAAAAAATACACA--TATGCATTTTATGAGTGAGAGTATTTGAGTTCTAATT-AAATTGTTGTCAGTGGATTTCTAAGGAATAGAGGAAATGATGAGGCAAGTGGGATTGTAGAGAGAGGGAGATTTCAACTTACATTTAATTCACTCCTGGAGTGTTTGAGTTTTTGTAATAAAACATTATAAAATGTTATATCATTTACAGTATGATCACTTATAAACTTTCATTTCAATTAAAAGGAAATTTTTAAAAAGAGGACTACCAAATGACTACTGCAGCCATTGTAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTTAATGTGTGCCTGCTAGGTCA----------AGACCCA----GATTTGACACTGTGTACAGTCAGGATATAAGTATCAAAACAGAAGATT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44367929 421 + 99763055 TCACAATTAGCATAATCCAATTTTTT--AAAAAGGTACACA--TATGCCTTTTATGAGTGAAAGTATTTGAGTTCTAATT-AAATTTTTGTTGGTGGATTTCTAAGGAATAGAAGAAATGGTGAGGCAAGTGGGATTGTAGAGAGAGGGAGATTTTAATTTACATTTAATTCACTCCTGGAGTGTTTGAGTTTTTGTAATAAAACATTATAAAATGTTATATCATTTACAGTATGATCACTTATAAACTTTCATTTCAATTAAAAGGAAAATTTTAAAAAGAGGACTACCAAATAACTACTGCAGCCATCGTAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTTAATGGGTGCCTACTAGGTCA----------AGACCCA----GATTTGACACTGTGTACAGTCAGGATATAAGTATCAAAACAGAAGATT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2756 420 - 21985 TCATAATTAGCATAATCCCA-TTTTT--AAAAAAGTACACA--TATGCGTTTTATGAGTGAGAGTATTTGAGTTCTAATT-AAATTGTTGTCGGTGGATTTCTAAGGAATAGAGGAAATGATGAGGCAAGTGGGATTGTAGAGAGAGGGAGATTTCAATTTACATTTAATTCACTCCTGGAGTGTTTGAGTTTTTGTAATAAAACATTATAAAATGTTATATCATTTACAGTATGATCACTTATAAACTTTCATTTCAATTAAAAGGAAATTTTTAAAAAGAGGACTACCAAATAACTACTGCAGCCATTGTAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTTAATGTGTGCCTGCTAGGTCA----------AGACCCA----GATTTGACACTGTGTACAGTCAGGATATAAGTATCAAAACAGAAGATT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67498469 434 - 121039945 TCATAATTAGCATAATCCAGTTTTTT--AAAAAGGTACACA--TATACCTTTTATGAGTGAAAGTATTTGAGTTCTAATT-AAATTTTTGATGGTGGATTTCTAAGGAACAGAGGAAATGGTGAGGCAAGTGGGATTGTAGAGAGAGGGAGATTTCAATTTACATTTAATTCACTCCTGGAGTGTTTGAGTTTTTGTAATAAAACATTATAAAATGTTATATCATTTACAGTATGATCACTTATAAACTTTCATTTCAATTAAAAGGAAAATTTTAAAGAGAGGACTACCAAATAACTACTGCAGCCATCATAG-TTTCATAAATGACTTTTT-GTTCCTTCATGTTGTGTTAATGGGTGCCTACTAGGTCAAATATAATGTAGATCAAATATAATTTGACACTGTGTACAGTCAGGATATAAGTATCAAAACAGAAGATT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23406637 415 + 169600520 TCATAATTAGCCTAATCTCG-TTTTTAAAAAAAGGTACACA--TACGCCTTTTATGAGTGAAAGTATT--AGTTCTAATT-AAATTTTTGTTGGTGGATTTCTAAGGAATAGAGGAATTGGTGAGGCAAGTGGGATTGTAGAGAGAGGGAGATTCCAATTTACATTTAATCCACTCCCAGAGTGTTTGAGTTTTTGTAATAAAACATTATAAAATGTTATATCATTTACAGTACGATCACTTATAAAC-----TTTCAATTAAAAGGAAATTTTTAAAAAGAGAACTACCAAATGACTACTGCAGCTATCATAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTCAATGGGTGCCCACTAGGTCA----------AGACCCA----GATTTAACACTGGGTACAGTCAGGATATAAGTATCAAAACAGGAGATT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24010616 415 + 171882078 TCATAATTAGCCTAATCTCG-TTTTTAAAAAAAGGTACACA--TACGCCTTTTATGAGTGAAAGTATT--AGTTCTAATT-AAATTTTTGTTGGTGGATTTCTAAGGAATAGAGGAATTGGTGAGGCAAGTGGGATTGTAGAGAGAGGGAGATTCCAATTTACATTTAATCCACTCCCAGAGTGTTTGAGTTTTTGTAATAAAACATTATAAAATGTTATATCATTTACAGTATGATCACTTATAAAC-----TTTCAATTAAAAGGAAATTTTTAAAAAGAGAACTACCAAACGACTACTGCAGCTATCATAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTCAATGGGTGCCCACTAGGTCA----------AGACCCA----GATTTAACACTGGGTACAGTCAGGATATAAGTATCAAAACAGGAGATT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13255752 415 - 40200012 TCATAATTAGCCTAATCTCA-TTTTTAAAAAAAGGTACACA--TACGCCTTTTATGAGTGAAAGTATT--AGTTCTAATT-AAATTTTTGTTGGTGGATTTCTAAGGAATAGAGGAATTGGTGAGGCAAGTGGGATTGTAGAGAGAGGGAGATTCCAATTTACATTTAATCCACTCCCAGAGTGTTTGAGTTTTTGTAATAAAACATTATAAAATGTTATATCATTTACAGTATGATCACTTATAAAC-----TTTCAATTAAAAGGAAATTTTTAAAAAGAGAACTACCAAATGACTACTGCAGCTATCATAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTCAATGGGTGCCCACTAGGTCA----------AGACCCA----GATTTAACATTGGGTACAGTCAGGATATAAGTATCAAAACAGGAGATT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3243573 415 + 7633303 TCATAATTAGCCTAATCTCA-TTTTTTAAAAAAGGTACACA--TACGCCTTTTATGAGTGAAAGTATT--AGTTCTAATT-AAATTTTTGTTGGTGGATTTCTAAGGAATAGAGGAATTGGTGAGGCAAGTGGGATTGTAGAGAGAGGGAGATTCCAATTTACATTTAATCCACTCCCAGAGTGTTTGAGTTTTTGTAATAAAACATTATAAAATGTTATATCATTTACAGTATGATCACTTATAAAC-----TTTCAATTAAAAGGAAATTTTTAAAAAGAGAACTACCAAATGACTACTGTAGCTATCATAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTCAATGGGTGCCCACTAGGTCA----------AGACCCA----GATTTAACACTGGGTACAGTCAGGATATAAGTATCAAAACAGGAGATT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21944734 417 - 58131712 TCATAATTAGCCTAATCTCA-TTTTTTAAAAAAGGTACACA--TATGCCTTTTATGAGTGAAAGTATTTGAGTTCTAATT-AAATTTTTGTTGGTGGATTTCTAAGGAATAGAGGAATTGGTGAGGCAAGTGGGATTGTAGAGAGAGGGAGATTCCAATTTACATTTAATTCACTCCCAGACTGTTTGAGTTTTTCTAATAAAACATTATAAAATGTTATATAATTTAGACTATGATCACTTAAAAAC-----TTTCAATTAAAAGGAAATTTTTAAAAAGAGAACTATCAAATGACTACTACAGCTATCATAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTTAATGGGTGCCCACTAGGTCA----------AGACCCA----GATTTGACACTGGGTACAGTCAGGATATAAGTATCAAAACAGGAGATT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 39627 415 + 2620224 TCATAATTACCCTAATCTCA-TTTTTAAAAAAAGGTACACA--TACGCCTTTTATGAGTGAAAGTATT--AGTTCTAATT-AAATTTTTGTTGGTGTTTTTCTAAGGAATAGAGGAATTGGTGAGGCAAGTGGGATTGTAGAGAGAGGGAGATTCCAATTTACATTTAATCCACTCCCAGAGTGTTTGAGTTTTTGTAATAAAACATTATAAAATGTTATATCATTTACAGTATGATCACTTATAAAC-----TTTCAATTAAAAGGAAATTTTTAAAAAGAGAACTACCAAATGACTACTGCAGCTATCATAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTCAATGGGTGCCCACTAGGTCA----------AGACCCA----GATTTAACACTGGGTACAGTCAGGATATAAGTATCAAAACAGGAGATT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2221967 417 + 10629787 TCATAATTAGCCTAATCTCA-TTTTTAAAAAAAGGTACACA--TATGCCTTTTATGAGTGAAAGTATTTGAGTTCTAATT-AAATTTTTGTTGGTGGATTTCTAAGGAATAGAGGAATTGGTGAGGCAAGTGGGATTGTAGAGAGAGGGAGATTCCAATTTACATTTAATTAACTCCCAGAGTGTTTGAGTTTTTGTAATAAAACATTATAAAATGTTATATCATTTACAGTATGATCACTTATACAC-----TTTCAATTAAAAGGAAATTTTTAAAAAGAGAACTACCAAATGACTACTGCAGCTATCATAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTTAATGGGTGCCCACTAGGTCA----------AGACCCA----GATTTGACACTGGGTACAGTCAGGATATAAGTATCAAAACAGGAGATT i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10575902 422 - 21366645 TCATCATGAGCATAACCCTT-CTTTTGTAAAAATATATGCA--TATGTCCTTTATGAGTGAAAGTATCTGAGTTCTAATT-AAATTTTTGTTGATGGATTTCTGAGGAATAGAGGAAATTGTGAGGCAAGTGGGATTGTAGCGAGATGGAGATTTCAATTTACATTTAATTTACTTTTGGAGTGTTTGAATTTTTGAAGTAAAACATTATAATATGTTATATCATTTCCACTATGAGCACTTAGAAATTTTCATTTCaattaaaataaaatttttaaaaaGAGGACTACCAAGTAACAACTGCAGCCATCACAG-TTTCATAAATGACTTTTTCCTTCCTTCATGTTGTGTTAATGGCTGCCTACTAGGTCA----------AGACCCA----GATTTGACACTGTGTACAGTCAAGATATAAGTATCAAAACAGAAGTTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3726700 422 - 13033340 TAATCACTGGCATAACCCTA-TTTCTGTAAAAATATATGCA--TATGTCTTTTATGAGTGAAAGTATCTGAGTTCTAATT-AAATTTTCGTTGGCGGATTTCTAAGGAATAGAGGAAATGGTGAGGCAAGTGGGATTGTAGAGGGATGGAGATTTCAATTTACATTTAATTTACTTTTGGAGTGTTTGAATTTTTGAAGTAAAACATTATAAAATGTTATATCATTTCCACTATGATCACTTATAAACTTTCATTTCAATTAAAATAAAATTTTTAAAAAGAAGACTACCAAATAACAACTGCACCCATCACAA-TTTCATAAATGACCTTTTCCTTCCTTCATGTCGTGTTAATGGCTGCCTACTAGGTCA----------AGACCCA----GATTTGACACTGTGTACAGTCAAGATATAAGTATCAAAACAGAAGTTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5218898 422 + 11604778 TCATTATTAGCATAACCCTA-TTTTTGTAAAAAGGTACGCA--TATGTCTTTTATGAGTGAAAGTATCTGAGTTCTAATT-AAATTTTTGTTGGTGGATTTCTAAGAAATGGAGGAAATGGTGAGGCAAGTGAGATTGTAGAGAGATGCAGATTTCAATTTACATTTAATTTACTTTTGGAGTGTTTGAATTTTTGAAGTAAAACATTATAAAATGTTATATCATTTGCACTATGATCACTTATAAACTTTCATTTCAATTGAAATAAAATTTATAAAAAGAGGACTAGCAAATAACAACTGCAGCCATCATAG-TTTCATAAGTGACTTTTTCCTTCCTTCATGTTGTGTTAATGGCTGCCTACTAGGTCA----------AGACCCA----GATTTGACACTGTGTACAGTCAAGATATTAGTATCAAAACAGAAGTTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 127472 400 + 36342412 TAATAATTACTATAATCTCA-TGTTT---TAAATGTACATGTCTATGTCTACTATGAGTTGGAGT-TTGGGATTATAATTCAAATTTTTATTGGTGAGTTTCTAAGGAACAGAGAGAAGGGTAAGAGACGTAGAATTGTGGAGAGGAGGAACTTTCAATTTATATTCAATCCACTTTGAGA----CTGAGTTTCTATAACCAAAC---ATAAAATGTTATATCATTTGTAATATCAGCATTTATAAAATTTTATTTCAATTTAAAGGAA--------------GAACACCAGGTGAAAACTGCAGC-ATTATAGTTTTCATTAGCGACTTTTTCCTTCCCTCATGTCTTGTTAATTGGTGCCTACTAGGGCA----------AGAATGA----GATTCCATTCTGTGTGCAATGAGGATGTAAACGTAGAAAATAAGGATT i otoGar3.GL873530 C 0 C 0 e canFam3.chr30 13405216 4140 + 40214260 I e dasNov3.JH579377 1803428 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=2551943.000000 s hg38.chrUn_KI270749v1 8605 257 + 158759 ACCTATCTGGATACCCTAGCTTCTCCA--TTCCTGAGCAAGTTGGGAGGCCATGGGGTACAA----CTCTCTCAATATGTACTAAGGAAACAGAGATACTTTTGCCAAAGGATATTCTTCTTGATGGTAAAA-------ATATTAGCTAACATTTGTTAGCTGACAAAAATGAAGTAtattaaatatgctaagggaaactgtggttcaagtgatagagatttttaattctttttgagatcatgtaattatacccatg--acaaggtaagttt s panTro5.chr1 101790026 257 - 228573443 ACCTATCTGGGTACCCTAGCTTCCCCA--TTTCTGAGCAAGTTGGGAAGCCATAGGGTCCAA----CTCTCTCAATATGTACAAATGAAACAGAGATACTTTTGCCAAAGGATATTCTTCTTGATGGTAAAA-------ATATTAGCTAACATTTGTTAGCTGACAAAAATGAAGTAtattaaatatgctaagggaaactgtggttcaagtgatagagatttttaattctttttgagatcatgtaattatacccatg--acaaggtatgttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44368350 259 + 99763055 TCCTATCTGGGTACCCTAGCTTCCCGA--TTCCTGAGCAAGCTGGGAAGCCATAGGGTCCAA----CTCTGTCTATATGTACTAATGAAACAGAGATACTTTTGTCAAAGAATATTCTTCTTGATGGTAAAA-------ATATTAGCTAACATTTGTTAGCTGACAAAAATGAAGTAtattaaatatgctaagggaaactgtggttcaagtgatagagatttttaattctttttgagatcatgtaattatacccatgatacaaggtaagttt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3176 257 - 21985 ACCTATCTGGGTACCCTAGCTTCCCCA--TTCCTGAGCAAGTTGGGAAGCCATAGGGTCCAA----CTCTCTCAATATGTACTAATGAAACAGAGATACTTTTGCCAAAGGATATTCTTCTTGATGGTAAAA-------ATATTAGCTAACATTTGTTAGCTGACAAAAATGAAGTAtattaaatatgctaagggaaactgtggttcaagtgatagagatttttaattctttttgagatcatgtaattatacccatg--acaaggtaagttt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67498903 259 - 121039945 TCCTATCTGGGTACCCTAGCTTCCCCA--TTTCTGAGCAAGCTGGGAAGCCATAGGGTCCAA----CTCTCTCTATATGTACTAATGAAACAGAGATACTTTTGTCAAAGGATATTCTTCTTGATGGTAAAA-------ATATTAGCTAACATTTGTTAGCTGACAAAAATGAAGTATATTAAATATGCTAAGGGAAATTGTGGTTCAAGTGATAGAGATTTTTAATTCTTTTTGAGATCATATAATTATACCCATGATATAAGGTAAGTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23407052 255 + 169600520 ACCTATCTGGGTACCCTAGCTTCCCCA--TTCCTGAGCAAGCTGGGAAGCCATAGGGTCCAA----CTCT----GTATGCACTAATGAAACAGAGATACTTTTGCCAAAGGATATTCTTCTTGATGGTAAAA-------ATATTAGCTAACATTTGTTAGCTGACAAAAATGAAGTAtattaaatatgctaagggaaattgtggttcaagtgatagagatttgtaattctttttgagaccatgtaattatacccatgatacaaggtaagttt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24011031 255 + 171882078 ACCTATCTGGGTACCCTAGCTTCCCCA--TTCCTGAGCAAGCTGGGAAGCCATAGGGTCCAA----CTCT----GTATGCACTAATGAAACAGAGATACTTTTGCCAAAGGATATTCTTCTTGATGGTAAAT-------ATATTAGCTAACATTTGTTAGCTGACAAAAATGAAGTAtattaaatatgctaagggaaattgtggttcaagtgatagagatttgtaattctttttgagaccatgtaattatacccatgatacaaggtaagttt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13256167 255 - 40200012 ACCTATCTGGGTACCCTAGCTTCCCCA--TTCCTGAGCAAGCTGGGAAGCCATAGGGTCCAA----CTCT----GTATGCACTAATGAAACAGAGATACTTTTGCCAAAGGATATTCTTCTTGATGGTAAAA-------ATATTAGCTAACATTTGTTAGCTGACAAAAATGAAGCAtattaaatatgctaagggaaattgtggttcaagtgatagagatttgtaattctttttgagaccatgtaattatacccatgatacaaggtaagttt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3243988 255 + 7633303 ACCTATCTGGGTACCCTAGCTTCCCCA--TTCCTGAGCAAGCTGGGAAGCCATATGGTCCAA----CTCT----ATATGCACTAATGAAACAGAGATACTTTTGCCAAAGGATATTCTTCTTGATGGTAAAA-------ATATTAGCTAACATTTGTTAGCTGACAAAAATGAAGTAtattaaatatgctaagggaaattgtggttcaagtgatagagatttgtaattctttttgagaccatgtaattatacccatgatacaaggtaagttt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21945151 258 - 58131712 ACCTATCTGGGTACCCTAGCTT-CCCA--TTCCTGAGCAAGCTGGGAAGCCATAGGGTCCAACTCTCTCT----ATATGCACTCATGAAACAGAGATACTCTTGCCAAAGGATATTCTTCTTGATGGTAAAA-------ATATTAGCTAACATTTGTTAGCTGACAAAAATGAAGTAtattaaatatgctaagagaaattgttgttcaagtaatagagatttgtaattctttttgagaccatgtaattatacccatgatacaaggtaagttt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 40042 255 + 2620224 ACCTATCTGGGTACCCTAGCTTCCCCA--TTCCTGAGCAAGCTGGGAAGCCATAGGGTCCAA----ttct----atatgcactaatgaaacagagatacttttgccaaaggatattcttcttgatggtaaaa-------atattagctaaCATTTGTTAGCTGACAAAAGTGAAGTAtattaaatatgctaagggaaattgtggttcaagtgatagagatttgtaattctttttgagaccatgtaattatacccatgatacaaggtaagttt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2222384 259 + 10629787 ACCTATCTGGGTACCCTAGCTTCCCCA--TTCCTAAGCAAGCTGGGAAGCCATAGGGTCCAA----CTCTATCCATATGCACTAATGAAACAGAGATACTTTTGCCAAGGGATATTCTTCTTGATGGTAAAA-------ATGTTAGCTAACATTTGTTAGCTGACAAAAATGAAGTAtattaaatatgctaagggaaattgtggttcaagtgatagagatttgtaattatttttgagaccatgtaattatacccatgatacaaggtaagttt i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10576324 258 - 21366645 ACCCATCTGGGTACCCTAGCTA-CCCG--TTCCTGAGCAAACTTGGAAGCCATACGATCCAA----CTATCTCTATATATACTAATGAAACAGAGATACTTTTGCTAAAGGATATTCTTCTTAATGGTAAAA-------ATATTAGCTAACATTTATTGGCTGACAAAAATGAGATATATTCAATATGCTAAGGGAAACTGTGGTTCAAGTGATAGAGACTTTTAATCATTTTTGAGATCATGTAATTATATCCATAATACAAGGTAAATTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3727122 258 - 13033340 ACCCATCTGGGTACCCTAGCTA-CCCA--CTCCTGAGCAAACTTGGAAGCCATAGGATCCAA----CTGTCTCTATATGTACTAATGAAACAGAGATACTTTTGCCAAAGGATATTCTTCTTAATGGTAAAA-------ATATTAGCTAACATTCGTTAGCTGGCAAAAATGAGATATATTCAAtatgctaagggaaactgtgcttcaagtgatagagacttttaatcattttggagatcatgtaattatacccatgagataaggtaaattt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5219320 258 + 11604778 ACCCATCTGGGTACCCTAGCTA-CCTG--TTCCTGAGCAAACTTGGAAGCCATAGGGTCCAA----CTGTCTCTATATGTACTAATGAAACAGAGATACGTTTGCCAAAGGATATTCTTCTTGATGGTAAAA-------ATATTAGCTAACATTTGTTAGCTGACAAAAATGAGATATATTCAAtatgctaagggaaactgtggttcaagtgatagagacttttaatcatttttgagatcatgtagttatacccatgatacaaggtaaattt i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 127872 247 + 36342412 GCCTATCTGGGTGCCCTGCCTTCCCTG-CTTTCTATGCAAGGTGGGAAGCCAT-GGGTCCAA----CCTTACCTATATATACTAGTGAGATACAGACACTTTTGCCAAACAACATTTCTCTTGGTAGAAAAA-------GTATTA---------TGTTAGCTAATATAAA--AGGTATATGAAATATGTTAAGGGAAACTGTGGTTC-AGTGATGAAGAATTTTAATCATTTTTGAGATGCCGTAATTATAGCCATGATACATGATAAGTTT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13409356 258 + 40214260 ACCCACCTGGGTGCCCTAACTTCCCCTACTTCCTGAGCAAGCTATGAAGTCACCAGGTCCAA----ACTT--CTATATATATGAGTGAAATGGAAATATTTTTGCCAAAGGACATT-TTCATGATATTGAAATATTATGATATTAAATATTA--TGTTA---AAAAAGAAAAAAGTACAGTAAATATGCAAAGAAAAACTGTGAATCAA-TGATGGAAATTT-CAGTCCTTTTTGAGATAATGTACTTAGAGTAGTAATACAAGGTAAGTTt i canFam3.chr30 I 4140 I 399 e dasNov3.JH579377 1803428 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=1835143.000000 s hg38.chrUn_KI270749v1 8862 206 + 158759 gattcagaataatttctgccaaaataaaggat-------gctgttgatggcctgcttgtcccctgcctattGACCATTATTCTCAAACTCAAGCAAAATTAATTTTTAAATAACAGGATAAGAAATATGAGTAAGCTCTGCCTTTTGTGGGTCAGGTTGAAAGTATGGAAGAAATTCAGAAAGGACA-TAGTC-----AGGAATAGATGAGAAAAGAAA s panTro5.chr1 101790283 206 - 228573443 gattcagaataatttctgccaaaataaaggat-------gctgttgatggcctgcttgtcccctgcctattgactattattctcaaactcaaGCAAAATTAATTTTTGAATAACAGGATAAGAAACATGAGTAAGCTCTGCCTTTTGTGGGGAAGGTTGAAAATATGGAAGAAATTCAGAAAGGACA-CAGTC-----AGGAATAGATGAGAAAAGAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44368609 206 + 99763055 gattcagaataatttctgccaaaataaaggat-------gctgttgatggcctgctcatcccctgcctatggactgttattcTCAAACTAAAACAAAATTAATTTTTAAATAACAGGATAAGAAATATGAATAAGCTCTGCCTTTTGTGGGACAGGTTGAAAGTACTGAAGAAATTCAGAAAGGACA-TAGTC-----AGGAATAGATAAGAAAAGAAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3433 206 - 21985 gattcagaataatttctgccaaaataaaggat-------gctgttgatggcctgcttgtcccctgcctattgactattattctcaaactcaaGCAAAATTAATTTTTAAATAACAGGATAAGAAATATGAGTAAGCTCTGCCTTTTGTGGGGCAGGTTGAAAGTATGGAAGAAATTCAGAAAGGACA-TAGTC-----AGGAATAGATGAGAAAAGAAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67499162 206 - 121039945 GATTCAGAATAATTTCTGCCACAATAAAGGAT-------GCTGTTGATGGCCTGCTCATCCCCTGCCTATTGGCTGTTATTCTCAAACTAAAAGAAAATTAATTTTTAAATAACAGGGTAAGAAATATGGATAAGCTATGCCTTTTGTGGGACAGGTTGAAAGTACTGAAGAAATTCAGAAAGGACA-TAGTC-----AGGAAAAGATGAGAAAAGAAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23407307 205 + 169600520 gacacagaataatttctgccaagataaaggat-------gctgttgatggcctgctcatcccctgcctattgactattattcTCAAACTAAAGCAAAATTAATTTTTAAATAACAGGTTAAGAAATATGAATAAGCTCTGCCTTTTGTGGGACAGTTTGGAAGTACTGAAGAAATTCAG-AAGGACA-TAATC-----AGAAATAGATGAGAAAAGAAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24011286 205 + 171882078 gacacagaataatttctgccaagataaaggat-------gctgttgatggcctgctcatcccctgcctattgactattattcTCAAACTAAAGCAAAATTAATTTTTAAATAACAGGTTAAGAAATATGAATAAGCTCTGCCTTTTGTGGGACAGTTTGGAAGTACTGAAGAAATTCAG-AAGGACA-TAATC-----AGAAATAGATGAGAAAAGAAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13256422 205 - 40200012 gacacagaataatttctgccaagataaaggat-------gctgttgatggcctgctcatcccctgcctattgactattattcTCAAACTAAAGCAAAATTAATTTTTAAATAACAGGTTAAGAAATATGAATAAGCTCTGCCTTTTGTGGGACAGTTTGGAAGTACTGAAGAAATTCAG-AAGGACA-TAATC-----AGAAATAGATGAGAAAAGAAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3244243 205 + 7633303 gacacagaataatttctgccaagataaaggat-------gctgttgatggcctgctcatcccctgcctattgactattattcTCAAACTAAAGCAAAATTAATTTTTAAATAACAGGTTAAGAAATATGAATAAGCTCTGCCTTTTGTGGGACAGTTTGGAAGTACTGAAGAAATTCAG-AAGGACA-TAATC-----AGAAATAGATGAGAAAAGAAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21945409 205 - 58131712 gacacagaataatttctgccaaaataaaggat-------gctgttgatggcctgctcatcccctgcctattGGCTATTATTCTCAAACTAAAGCAAAATTAATTTTTAAATAACAGGATAAGAAATATGAATAAGCTCTGCCTTTTGTGGGACAGTTTGGAAGTACTGAAGAAGTTCAG-AAGGACA-TAGTC-----AGAAATAGATGAGAAAAGAAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 40297 205 + 2620224 gacacagaataatttctgccaagataaaggat-------gctgttgatggcctgctcatcccctgcctattgactattactcTCAAACTAAAGCAAAATTAATTTTTAAATAACAGGTTAAGAAATATGAATAAGCTCTGCCTTTTGTGGGACAGTTTGGAAGTACTGAAGAAATTCAG-AAGGACA-TAATC-----AGAAATAGATGAGAAAAGAAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2222643 205 + 10629787 gacacagaataatttctgccaaaacaaaggat-------gctgttgatggcctgctcatcccctgcctattGACCATTATTCTCAAACTAAAGCAAAATTAATTTTTAAATAACAGGATAAAAAATATGAATAAGCTCTGCCTTTTGTGGGACAGTTTGGAAGTACTGAAGAAATTCAG-AGGGACA-TAGTC-----AGAAATAGATGAGAAAAGAAA i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10576582 210 - 21366645 GATTCAGAATAATTTCTGACAAAATAAAGGCT-------GCTGTTGATGGCCTGCTTGTACCCTGCCCATTGACTATTATTCTCAAACTAAAGCAAAATTAA-TTTTAAATAACAGGTTAAGAAATGTAAATAAGTTCTTCCTTTTGTGGTACAGCTTGTAAATACTGAAGAAATTCAGAATGGACA-TAGTCTAGGTAGGAATAGATGAGAAAAAAAA i saiBol1.JH378136 C 0 I 218 s cebCap1.NW_016107324v1 3727380 210 - 13033340 gattcagtataatttctgccaaaataaaggct-------gctgttgatggcctgcttgtcccctgcctattgactattattcTCAAACTAAAGCAAAATTAA-TTttaaataacaatataagaaatggaaataagttcttccttttgtggtacagcttgtaaatactgaagaaattcagaaaggaca-tagtctaggtaggaatagatgagaaaaAAAA i cebCap1.NW_016107324v1 C 0 I 16 s aotNan1.NW_018501505v1 5219578 206 + 11604778 gattcagaaaaatttctgccaaaataaaggct-------gctgttgatggcctgcttgttccctgcctattGACTATGATTCTCAAACT-AAGCAAAATTAA-TTTTAAATAA-AGGATAAGAAatataaataagttcttccttttgtggtacagcttgtaaatactgaaggaatgcagaaaggaca-tagtctaggtaggaatagatgagaaaaAA-- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 128119 218 + 36342412 GACTCCGAATAATTTCTACCAAGATAAAGGGTACTAAAGGCTACTGCTGGCCTGCTTGTCCCCTGTCTACTGACCATTGTTCTAACACTAAAGCAAAAAACGTTTTCAAATAGCAGGTTAAGAAATAGAACACACTGCTGCCTTTTGAAGGACAGGTTGTAAGTACTGAAGGAATTCACAAAGGACAGTGATCAAGATGGGAACACATGAAGGAAAAA- i otoGar3.GL873530 C 0 C 0 e canFam3.chr30 13409614 399 + 40214260 I e dasNov3.JH579377 1803428 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=98818.000000 s hg38.chrUn_KI270749v1 9068 16 + 158759 AATATATATTATTTTG s panTro5.chr1 101790489 16 - 228573443 AATATATATTATTTTG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44368815 16 + 99763055 AATATATATTATTTTG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3639 16 - 21985 AATATATATTATTTTG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 67499368 16 - 121039945 AATATATATTCCTTTG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23407512 16 + 169600520 ACCATACATTATTTTG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24011491 16 + 171882078 AACATACATTATTTTG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13256627 16 - 40200012 AACATACATTATTTTG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3244448 16 + 7633303 AACATACATTATTTTG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21945614 16 - 58131712 AACATAGATTATTTTG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 40502 16 + 2620224 AACATACATTATTTTG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2222848 16 + 10629787 AACATACATTATTTTG i colAng1.NW_012121598v1 C 0 C 0 s cebCap1.NW_016107324v1 3727606 16 - 13033340 tatatatattatGTTG i cebCap1.NW_016107324v1 I 16 C 0 s aotNan1.NW_018501505v1 5219784 16 + 11604778 TATATATATTATGTTG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 128337 15 + 36342412 AATAAAAACTGTTGG- i otoGar3.GL873530 C 0 C 0 e canFam3.chr30 13409614 399 + 40214260 I e dasNov3.JH579377 1803428 0 - 2868945 C e saiBol1.JH378136 10576792 218 - 21366645 I e calJac3.chr10 24181774 1302 + 132174527 I a score=946467.000000 s hg38.chrUn_KI270749v1 9084 123 + 158759 GCCATtgatatggtttggctctgtgtccccacccaaatctcatcttcaattgtaatccccacatataaaggaaggaacctggtgggaggtgattggatcatggcagcagcttcccccatgctg s panTro5.chr1 101790505 123 - 228573443 GCCATtgatatggtttggctctgtgtccccacccaactctcatcttgaattgtaatccccacatataaaggaaggaacctcgtgggaggtgattggatcatgggagcagcttcccccatgctg i panTro5.chr1 C 0 C 0 s panPan2.chr15 44368831 123 + 99763055 GCCATtgatatggtttggctctgcgtgcccacccaaatctcatctcgaattgtaatccccacatgtaaaggaaggaacctggtgggcggtgattggatcatgggagcagcttcccccatgctg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3655 123 - 21985 GCCATtgatatggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacatgtaaaggaaggaacctggtgggaggtgattggatcatgggagcagcttcccccatgctg i gorGor5.CYUI01005903v1 C 0 N 0 s nomLeu3.chr6 67499384 123 - 121039945 GCCATtgatatggtttggctctgtgtctccacccaaatctcatctcgaattgtaatccccacatgtaaaggaaggaacctggtggcaggtgattgaatcatgggagcagcttccaccatgctg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23407528 123 + 169600520 GCCATtgatatggtttggctctgtgtccccacccaaatctcacctcaaattgtaatccccacatgtaaaggaaggagactggtgggaggtgattggatcatgggagcagcttcccccacgctg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24011507 123 + 171882078 GCCATtgatatggtttggctctgtgtccccacccaaatctcacctcaaattgtaatccccacatgtaaaggaaggagactggtgggaggtgattggatcatgggagcagcttcccccacgctg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13256643 123 - 40200012 GCCATtgatatggtttggctctgtgtccccacccaaatctcacctcaaattgtaatccccacatgtaaaggaaggagactggtaggaggtgattggatcatgggagcagcttcccccacgctg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3244464 123 + 7633303 GCCATtgatatggtttggctctgtgtccccacccaaatctcacctcaaattgtaatccccacatgtaaaggaaggagactggtgggaggtgattggatcatgggagcagcttcccccatgctg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21945630 123 - 58131712 GCCGTtgatatggtttgggtctgtgtccctacccaaatctcacctcaaattgtaatccccacatgtaaaggaaggagcctggtggaaggtgattggatcatgggagcagcttcccccatgctg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 40518 123 + 2620224 GCCATtgatatggtttggctctgtgtccccacccaaatctcacctcaaattgtaatccccacatgtaaaggaaggagactggtgggagatgattggatcatgggagcagcttcccccatgctg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2222864 123 + 10629787 GCCATtgatatggtttggccctgggtccccacccaaatctcacctcgaattgtaatccccacatgtaaaggaaggagcctggtggaaggtgattggatcatgggagcagcttcccccgtgctg i colAng1.NW_012121598v1 C 0 C 0 s cebCap1.NW_016107324v1 3727622 122 - 13033340 GCCATtgacatggtttggttctgtgtccccacccaaatctcatctctaatggtaatccccacctgtaaa-gaaggaacctggtgggaggtgattagatcatgggagcagtttcccccatgctg i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5219800 122 + 11604778 GCCATtgatacgatttggttctgtgtccccacccaaatctcatcttgaatggtaatccccacctgtaaa-gaaggaacctggtgggaggtgattagatcatgggagcagtttcccccatgctg i aotNan1.NW_018501505v1 C 0 C 0 e otoGar3.GL873530 128352 0 + 36342412 C e canFam3.chr30 13409614 399 + 40214260 I e dasNov3.JH579377 1803428 0 - 2868945 C e saiBol1.JH378136 10576792 218 - 21366645 I e calJac3.chr10 24181774 1302 + 132174527 I a score=124312.000000 s hg38.chrUn_KI270749v1 9207 16 + 158759 ttctcatgataatgag s panTro5.chr1 101790628 16 - 228573443 ttctcatgataatgag i panTro5.chr1 C 0 C 0 s panPan2.chr15 44368954 16 + 99763055 ttctcataataatgag i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 0 16 - 24701 ttctcatgataacaag i gorGor5.CYUI01005671v1 N 0 C 0 s nomLeu3.chr6 67499507 16 - 121039945 ttctcatgataatgag i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23407651 16 + 169600520 ttctcatgataatgag i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24011630 16 + 171882078 ttctcatgataatgag i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13256766 16 - 40200012 ttctcatgataatgag i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3244587 16 + 7633303 ttcttatgataatgag i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21945753 16 - 58131712 ttctcatgataatgag i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 40641 16 + 2620224 ttctcatgataatgag i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2222987 16 + 10629787 ttctcatgatcatgag i colAng1.NW_012121598v1 C 0 C 0 s cebCap1.NW_016107324v1 3727744 16 - 13033340 ttctcatgatagtgag i cebCap1.NW_016107324v1 C 0 I 11 s aotNan1.NW_018501505v1 5219922 16 + 11604778 ttctcatgatagtgag i aotNan1.NW_018501505v1 C 0 I 13 e otoGar3.GL873530 128352 0 + 36342412 C e canFam3.chr30 13409614 399 + 40214260 I e dasNov3.JH579377 1803428 0 - 2868945 C e saiBol1.JH378136 10576792 218 - 21366645 I e calJac3.chr10 24181774 1302 + 132174527 I a score=1063126.000000 s hg38.chrUn_KI270749v1 9223 215 + 158759 ttaagttctcaagagatctgatgggtttataagtgtttgacagttcctccttcacatgcttactttctcccttgcctgccaccatagaagatgtgtctgcttctcctcccaccatcatggtaagtttcctgaggcctctccagcatgcagaactgtgagtcaattaaaccttttttcctttataaattacccagtctcaggaaagtcttttatga s panTro5.chr1 101790644 215 - 228573443 ttaagttctcaagacatctgatgggtttttaagtgtttgacagctcttccttcacatgcttactttctcccttgccttccaccataaaagatgtgtctgcttctcctcccaccatcatggtaagtttcctgaggcctctccagcatgcagaacggtgagtcaattaaaccttttttcctttataaattacctagtctcagaaaagtcttttatga i panTro5.chr1 C 0 C 0 s panPan2.chr15 44368970 177 + 99763055 -taagttct-----------------------------------tcctccttcatgtgcttactttctcccttgcc-gtcgccatataagacatgtctgcttcccctcccaccatcattgtaagtttcctgaggcctctctagcatgcagaactgtgagtcaattaaacc-tttttcctttataaattacccagtctcaggaaagtcttttatgg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 16 214 - 24701 ataagttctcaagagatctgatgggtttataagtgtttgacagttcctccttcacatgtttactttctcccttgcctgccaccatagaagatgtgtctgcttctcctcccaccatcatggtaagtttcctgaggcctctccagcatgcagaactgtgagtcaattaaacc-tttttcctttataaattacccagtctcaggaaagtcttttatga i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67499523 177 - 121039945 -taagttct-----------------------------------tcctccttcacgtgcttactttctcccttgcc-gtcgccatataggacatgtctgcttcccctcccaccatcattgtaagtttcctgaggcctctccagcatgcagaactgtgagtcaattaaagc-tttttcctttataaattacccagtctcaggaaagtcttttatgg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23407667 213 + 169600520 -taagttctcaagagatctgatggttttataagtgtttgacagttcctccttcacatgcttactttctcccttgcctgccaccatagaagacatgtctgcttcccctcccaccatcattgtaagtttcctgaggcctctccagcatgcagaactgtgagtcaattaaacc-tttttcctttataaattacccagtctcaggaaattcttttatga i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24011646 213 + 171882078 -taagttctcaagagatctgatggttttataagtgtttgacagttcctccttcacatgcttactttctcccttgcctgccgccatagaagacatgtctgcttcccctcccaccatcattgtaagtttcctgaggcctctccagcatgcagaactgtgagtcaattaaacc-tttttcctttataaattacccagtctcaggaaattcttttatga i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13256782 213 - 40200012 -taagttctcaagagatctgatggttttataagtgtttgacagttcctccttcacatgcttactttctcccttgcctgccgccatagaagacatgtctgcttcccctcccaccatcattgtaagtttcctgaggcctctccagcatgcagaactgtgagtcaattaaacc-tttttcctttataaattacccagtctcaggaaattcttttatga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3244603 213 + 7633303 -taagttctcaagagatctgatggttttataagtgtttgacagttcctccttcacatgcttactttctcccttgcctgccgccatagaagacatgtctgcttcccctcccactatcattgtaagtttcctgaggcctctccagcatgcagaactgtgagtcaattaaacc-tttttcctttataaattacccagtctcaggaaattcttttatga i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21945769 213 - 58131712 -taagttctcaagagatctgatggttttatgagtgtttgacagttcctccttcacatgcttactttctcccttgcctgccgccatagaagacatgtctgcttcccctcccaccatcattgtaagtttcctgaggcctctccagcatgcagaactgtgagtcaattaaacc-tttttcctttataaattacccagtctcaggaaattcttttatga i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 40657 213 + 2620224 -taagttctcaagagatctgatggttttataagtgtttgacagttcctccttcacatgcttactttctcccttgcctgccgccctagaagacatgtctgcttcccctcccaccatcattgtaagtttcctgaggcctctccagcatgcagaactgtgagtcaattaaacc-tttttcctttataaattacccagtctcaggaaattcttttatga i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2223003 163 + 10629787 -taagttctcaagagatctgatggttttataagtgtttgacagttcctccttcacgtgcttactttctcccttgcctgacgccatgtaagacatgtctgctt--------------------------------------------------ctgtgagtcaattaaacc-tttttcctttataaattacccagtctcaggaaattcttttataa i colAng1.NW_012121598v1 C 0 C 0 e otoGar3.GL873530 128352 0 + 36342412 C e aotNan1.NW_018501505v1 5219938 13 + 11604778 I e cebCap1.NW_016107324v1 3727760 11 - 13033340 I e canFam3.chr30 13409614 399 + 40214260 I e dasNov3.JH579377 1803428 0 - 2868945 C e saiBol1.JH378136 10576792 218 - 21366645 I e calJac3.chr10 24181774 1302 + 132174527 I a score=125617.000000 s hg38.chrUn_KI270749v1 9438 23 + 158759 cagtgtgaaagcagactaataca s panTro5.chr1 101790859 23 - 228573443 cagtgtgaaaatgtactaatata i panTro5.chr1 C 0 C 0 s panPan2.chr15 44369147 23 + 99763055 tagtgtgaaaacagactaataca i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 230 23 - 24701 cagtgtgaaagcagactaatgca i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67499700 23 - 121039945 cagtgtgaaaacggactaataca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23407880 23 + 169600520 cagtgtgaaaatggactaataca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24011859 23 + 171882078 cagtgtgaaaatggactaataca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13256995 23 - 40200012 cagtgtgaaaatggactaataca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3244816 23 + 7633303 cagtgtgaaaatggactaataca i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21945982 23 - 58131712 cagtgtgaaaatggactaataca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 40870 23 + 2620224 cagtgtgaaaatgggcttataca i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2223166 23 + 10629787 tagtgtgaaaatggactaataca i colAng1.NW_012121598v1 C 0 C 0 s canFam3.chr30 13410013 23 + 40214260 AGGTGAGGAAAGAGGTAAATTTA i canFam3.chr30 I 399 C 0 e otoGar3.GL873530 128352 0 + 36342412 C e aotNan1.NW_018501505v1 5219938 13 + 11604778 I e cebCap1.NW_016107324v1 3727760 11 - 13033340 I e dasNov3.JH579377 1803428 0 - 2868945 C e saiBol1.JH378136 10576792 218 - 21366645 I e calJac3.chr10 24181774 1302 + 132174527 I a score=739830.000000 s hg38.chrUn_KI270749v1 9461 109 + 158759 GCCAT------GAGAAATGAATAACGGTTAAATGGTAG---GA----AGAAGAAAGAACATTCTTGGCCTAGAGAGTACAAAAGGAAAGCCATGGGGTTGGACCTAAAAAGAATACA----AAGAG s panTro5.chr1 101790882 113 - 228573443 GCCAT------GAAAAATGAATAATGGTTAAATGGTAG---GA----AGAAGAAAGAATATTCTTGGCCTAGAGAGTACAAAAGGAAAGCCATGGGGTTGGACCTAAAAAGAATACAAAGGAAGAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44369170 110 + 99763055 GCCAT------GAAAAATGAATAATGGTTAAATAGCAG---GA----AGAAGAAAGAACATTCTTGTCCTAGAGAGTACAAAAGGAAAGCCATGGGGTTGGACCAAAGAAGAATACAA---AGGAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 253 112 - 24701 GCCAT------GAGAAATGAATAATGGTTAAATGGTAG---GA----AGAAGAAGGAACATTCTTGGCCTAGAGAGTACAAAAGGAAAGCCATGGGGTTGGACCTAA-AAGAATACAAAGGAAGAG i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67499723 113 - 121039945 GCCAT------AAAAAATGAATAACGGTTAAATGGCAG---GA----AGAAGAAAGAACATTCTTGGCCTAGAGAGTACAAAAGGAAAGCCATGGGGTTGGACCTAAGAAGAATACAAAGGAAGAG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23407903 113 + 169600520 GCCAT------GAAAAATGAATAATGGTTAAATGGCAG---GA----AGAAGAAAGAACATTCTTGGCCTAGAGAGTACAAAAGGAAAGCCATGGGGTTGGACCTAAGAAGAATACAAAGGAAGAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24011882 113 + 171882078 GCCAT------GAAAAATGAATAATGGTTAAATGGCAG---GA----AGAAGAAAGAACATTCTTGGCCTAGAGAGTACAAAAGGAAAGCCATGGGGTTGGACCTAAGAAGAATACAAAGGAAGAG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13257018 113 - 40200012 GCCAT------GAAAAATGAATAATGGTTAAATGGCAG---GA----AGAAGAAAGAACATTCTTGGCCTAGAGAGTACAAAAGGAAAGCCATGGGGTTGGACCTAAGAAGAATACAAAGGAAGAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3244839 113 + 7633303 GCCAT------GAAAAATGAATAATGGTTAAATGGCAG---GA----AGAAGAAAGAACATTCTTGGCCTAGAGAGTACAAAAGGAAAGCCATGGGGTTGGACCTAAGAAGAATACAAAGGAAGAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21946005 113 - 58131712 GCCAT------GAAGAATGAATAATGGTTAAATAGCAG---GA----ATAAGAAAGAACATTCTTGGCCTAGAGAGTACAAAAGGAAAGTCATGGGGTTGGACCTAAGAAGAATACAAAGGAAGAG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 40893 113 + 2620224 GCCAT------GAAAAATGAATAATGGTTAAATGGCAG---GA----AGAAGAAAGAACATTCTTGGCCTAGAGAGTACAAAAGGAAAGCCATGGGGTTGGACCTAAGAAGAATACAAAGGAAGAG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2223189 112 + 10629787 GCCAT------GAAAAATGAATAATGGTGAAATGGCAG---GA----AGAAGAAAGAACATTCTTGGTCTGGAGAGTACCAAAGGAAAGCCATGGGGTTGGA-CTAAGAAGAATGCAAAGGAAGAG i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 128352 113 + 36342412 GCCAT------GAAGAATGCATAATATCTGAATGGCAAGGTGG----AGAAGAAAGAGCATTCTTGGTCAAGATAACATGAAAAGAAAGTCATAGAGTTAGACAT---AAGATTATATAGGAGGGA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13410036 114 + 40214260 GTCAGTCAATAGAAGGATGGCTAATAAT---ATGGCAG---GATATGAGAAGAAAGAACATT-TTGGCAAGAAAAACACAAAAGAGAAGCCATGGGGTTTGAT-----AAGAATGCATGGGAAGGA i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5219938 13 + 11604778 I e cebCap1.NW_016107324v1 3727760 11 - 13033340 I e dasNov3.JH579377 1803428 0 - 2868945 C e saiBol1.JH378136 10576792 218 - 21366645 I e calJac3.chr10 24181774 1302 + 132174527 I a score=93425.000000 s hg38.chrUn_KI270749v1 9570 17 + 158759 GAGAGAAGAG---TACTAAT s panTro5.chr1 101790995 17 - 228573443 GAGAGAAGAG---TACTAAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44369280 18 + 99763055 GAGAGAAGAGT--TACTCAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 365 17 - 24701 GAGAGAAGAG---TACTCAT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67499836 18 - 121039945 GAGAGAAGAGT--TACTCAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23408016 17 + 169600520 GAGAGAAGAG---TGCTTAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24011995 17 + 171882078 GAGAGAAGAG---TGCTTAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13257131 17 - 40200012 GAGAGAAGAG---TGCTTAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3244952 17 + 7633303 GAGAGAAGAG---TACTTAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21946118 20 - 58131712 GAGAGAAGAGTACTACTTAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 41006 17 + 2620224 GAGAGAAGAG---TACTTAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2223301 17 + 10629787 GAGAGAAGAG---TAGGTAT i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10577010 16 - 21366645 gagag-atag---cactcag i saiBol1.JH378136 I 218 C 0 s otoGar3.GL873530 128465 17 + 36342412 GAGAAAAGAA---CATTCAG i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13410150 17 + 40214260 CAGGAAAAAA---TACCGAT i canFam3.chr30 C 0 I 3 e aotNan1.NW_018501505v1 5219938 13 + 11604778 I e cebCap1.NW_016107324v1 3727760 11 - 13033340 I e dasNov3.JH579377 1803428 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=1656004.000000 s hg38.chrUn_KI270749v1 9587 201 + 158759 TGTG---CTCA-GGAGCTGAA-TTGGGAA-ATTTT---TTACAAAACCAA-----------GAAATACCAAACTTAGTGAACTATTGTGGGACAAGTGAATAAAGAAATATTAAAGCAATGAAAAATAA---TTTAAGTAA-AT---ATGAGA---AGAAAAATTAAGAATATCTGTATATTTTTGATCAAAGGTTGTAATGATTAAAGTTACATTATAAATTATTCTATC s panTro5.chr1 101791012 201 - 228573443 TGTG---CTCA-GGAACTGAA-TTGGGAA-ATTTT---TTACAAAACCAA-----------GAAATACCAAACTTAGTGAACTATTGTGGGACCAGTGAATAAAGAAATATTAAAGCGATGAAAAATAA---TTTAAGTAA-AT---ATGAGA---AGAAAAATTAAGAATATCTGTATATTTTTGATCAAAGGATGTAATGGTTAAAGTTACATTATAAAGTATTCTATC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44369298 199 + 99763055 TGTG---CTCA-GGAGCTGAA-TTGGGAA-ATTTT---TTACAAAAGCAA-----------GAAATACCAAACTTAGTGAACTATTGTGGTACCAGTGAATAAAGAAATATTAAAGTGATGAAAAATAA---TTTAAGTAA-AT---ATAATG---AGAAGAA--AAGAATATCTGTATATTTTTCATCAAAGGATATAATGATTAAAGTTACATTATAAATCATTCTATC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 382 202 - 24701 TGTG---CTCAGGGAGCTGAA-TTGGGAA-ATTTT---TTACAAAACCAA-----------GAAATACCAAACTTAGTGAACTATTGTGGGACCAGTGAATAAAGAAATATTAAAGCGATGAAAAATAA---TTTAAGTAA-AT---ATGAGA---AGAAAAATTAAGAATATCTGTATATTTTTGATCAAAGGTTGTAATGATTAAAGTTACCTTATAAATTATTCTATC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67499854 204 - 121039945 TGTG---CTTA-GGAGCTGAA-TTGGGAA-ATTTT---TTACAAAACCAA-----------GAAATACCAAACTTAGTGAACTATTGTGGGACCAGTGAATAAAGAAATATTAAAGCGATGAAAAATAA---TTTAAGTAA-ATATAATGAGA---AGAAAAATTAAGAATATCTGTATATTTTTCATCAAAGGATGTAATGATTAAAGTTACATTAGAAATCATTCTATC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23408033 193 + 169600520 TGTG---CTCA-GGAGCTGAA-CTGGGAA-TTTTAAAAAAAAAAAAAC--------------AAATACCAAACTT----AGCTATTGTAGGACCAGTGAATAAAGAAATATTAAAGCGATGAAAAATAA---TT----TAA-AT---ATGAGA---AGAAAAATTATGAGTATCTGTATATTTTTGATCAAAGTATATAATGATTAAAGTTGCATTATAAATTATTCTATC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24012012 196 + 171882078 TGTG---CTCA-GGAGCTGAA-CTGGGAA-TTTTTAAAAAAAAAAAACAA-----------GAAATACCAAACTT----AGCTATTGTAGGACCAGTGAATAAAGAAATATTAAAGCGATGAAAAATAA---TT----TAA-AT---ATGAGA---AGAAAAATTATGAGTATCTGTATATTTTTGATCAAAGTATATAATGATTAAAGTTGCATTATAAATTATTCTATC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13257148 197 - 40200012 TGTG---CTCA-GGAGCTGAA-CTGGGAATTTTTTAAAAAAAAAAAACAA-----------GAAATACCAAACTT----AGCTATTGTAGGACCAGTGAATAAAGAAATATTAAAGCGATGAAAAATAA---TT----TAA-AT---ATGAGA---AGAAAAATTATGAGTATCTGTATATTTTTGATCAAAGTATATAATGATTAAAGTTGCATTATAAATTATTCTATC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3244969 195 + 7633303 TGTG---CTCA-GGAGCTGAA-CTGGGAA-TTTTT-TTAAAAAAAAACAA-----------GAAATACCAAACTT----AGCTATTATAGGACCAGTGAATAAAGAAATATTAAAGTGATGAAAAATAA---TT----TAA-AT---ATGAGA---AGAAAAATTATGAGTATCTGTATATTTTTTATCAAAGTATGTAATGATTAAAGTTGCATTATAAATTATTCTATC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21946138 195 - 58131712 TGTG---CTCA-GGAGCTGAA-TTGGGAA-TTTTT-TTTAAAAAAAACAA-----------GAAATACCAAACTT----AGCTATTTTGGGACCAGTGAATAAAGAAATATTAAAGGGATGAAAAATAA---TT----TAA-GT---ATGAGA---AGAAAAATTATGTGTATCTGTATATTTTTTATCAAAGGATATAATGATTAAAGTTGCATTATAAATTATTCTATC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 41023 195 + 2620224 TGTG---CTCA-GGAGCTGAA-CTGGGAA-TTTTT-TTTTAAAAAAACAA-----------GAAATACCAAACTT----AGCTATTGTAGGACCAGTGAATAAAGAAATATTAAAGCGATGAAAAATAA---TT----TAA-AT---ATGAGA---AGAAAAATTATGAGTATCTGTATATTTTTGATCAAAGTATGTAATGATTAAAGTTGCATTATAAATTATTGTATC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2223318 198 + 10629787 TGTG---CTCA-GGAGCTGAA-TTGGGAA-TTTTT--TTTAAAAAAACAA-----------GAAATACCAAACTTAGTGAGCTATTGTGGGACCAGTGAATAAAGAAATATTAAAGCGATGAAAACTAA---TT----TAA-AT---ATGAGA---AGAAAAATTATGAGTATCTGTGTATTTTTGATCAAAGGATGTAATAATTAAAGTTGCATTATAAATTATTCTATC i colAng1.NW_012121598v1 C 0 I 1720 s saiBol1.JH378136 10577026 201 - 21366645 tgtg---ctca-ggagctgaa-ttggAAA-TTTTT---TTTAAAAACCAA-----------GAAATGTCAAACTCAGTGAACTATTGTGTGAGCAGTGAAAAAAGAAACATTAAAGTGATAAAAAATAA---TTTAAGTAA-AT---ATAATG---AGAACAGTTAAGAATGTCTATATATTTTTGATCAAAGGATGTAATGATTAAAGTTACATCATAAATTGTTCTGTC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3727771 201 - 13033340 tgtg---ctta-ggagctgaa-ttggGAA-ATTTT---TTTAAAAACCAG-----------GAAATACCAAACTCAGTGAACTATTGTGTGAGCAATGAAAAAAGAAACATTAAAGTGATAAAAAATAA---TTTAAGTAA-AT---ATAATG---AGAACAATTAAGAATATCTATATATTTTTGATCAAAGGATGTAATGATTAAAGCTTTATCATAAATTATTCTGTC i cebCap1.NW_016107324v1 I 11 C 0 s aotNan1.NW_018501505v1 5219951 204 + 11604778 tgtg---ctca-ggagctgaa-ttggGAA-ATTTT---TTTAAAAACCAA-----------GAAATACCAAACTCAGTAAACTATTGTGTGAGCAGTGAATAAAGAAACATTAAAGTGATAAAAAATAA---TTTAAGTAA-AT---ATAATGAGAAGAACAATTAAGAATATCTATATATTTTTGATCAAAGGATGTAATGATTAAAGTTACATTATAAATTATTCTGTC i aotNan1.NW_018501505v1 I 13 C 0 s otoGar3.GL873530 128482 215 + 36342412 TGTGAATATTG-AGAGCTGAGCTTTAGAA-AATTT---AAACAAAACCAAATGAAACAAAGAAACTACCAAGCTTGGTGG--TACTATGGGACCAGAGAAAAGAGAAAGGTTAAAGCAATAAAAAAAAAGAGGTTAAATAA-AT---ATAAGGAG-AGAAAAATTAAGAATGTTTGTAGA-ATTTGATCAAAAAGTGGAA---TTAAAGTTATGCTATAAGTGATTCTGTC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13410170 193 + 40214260 TGGG---CTTT-GGAGCAAAA-TTGGAAA---TTT---AAACAACAATGA-----------TCAAAAAAAAATTTAGCTAAGTATTGTGGGACCAGGGGATAGAGAAAGATTAAACCAATAATGAAGAA---CT----TAATAT---AAAACA---AAGAAAATTGAGAAT---TATAGATTCCTGATAAAAAGATGCAATGATTAAAGTCACATTATAAAATATTCTGCC i canFam3.chr30 I 3 C 0 e dasNov3.JH579377 1803428 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I a score=507784.000000 s hg38.chrUn_KI270749v1 9788 75 + 158759 TATGGAATTAATTATGGATCAAAAA--------------------------GAATACAAGTC-----AGACAAACTAT----AAACTTCTCTC--AT-----------TCTTTATTTTGGAAC s panTro5.chr1 101791213 75 - 228573443 TATGGAATTAATTATGGATTGAAAA--------------------------GAATAAAAGTC-----AGACAAACTAC----AAACTTCTCTC--AT-----------TCTTTATTTTGGAAC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44369497 71 + 99763055 TATGG----AATTATGGATTGAAAA--------------------------GAATAAAAGTC-----AGACAAACTGT----AAACTTCTCTC--AT-----------TCTTTATTTTGGAAC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 584 75 - 24701 TATGGAATTAATTATGGATCAAAAA--------------------------GAATACAAGTC-----AGACAAACTAT----AAACTTCTCTC--AT-----------TCTTTATTTTGGAAC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67500058 71 - 121039945 TATGG----AATTATGGATTGAAAA--------------------------GAATAAAAGTC-----AGACAAACTAT----AAACGTCTCTC--AT-----------TCTTTATTTTGGAAC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23408226 71 + 169600520 TATGG----AATTATGGATTGAAAA--------------------------CAATAAAAGTC-----AGACAAACTAT----AAACTTCTCTC--AT-----------TCTTTATTTTGGAAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24012208 71 + 171882078 TATGG----AATTATGGATTGAAAA--------------------------CAATAAAAGTC-----AGACAAACTAT----AAACTTCTCTC--AT-----------TCTTTATTTTGGAAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13257345 71 - 40200012 TATGG----AATTATGGATTGAAAA--------------------------CAATAAAAGTC-----AGACAAACTAT----AAACTTCTCTC--AT-----------TCTTTATTTTGGAAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3245164 71 + 7633303 TATGG----AATTATGGATTGAAAA--------------------------CAATAAAAGTC-----AGACAAACTAT----AAACTTCTCTC--AT-----------TCTTTATTTTGGAAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21946333 68 - 58131712 TATGG----AATTATAGATTGAAAA--------------------------CAATAAAAGTC-----AGACAAACTAT----AAA---CTCTC--AT-----------TCTTTATTTTGGAAC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 41218 71 + 2620224 TATGG----AATTATGGATTGAAAA--------------------------CAATAAAAGTC-----AGACAAACTAT----AAACTTCTCTC--AT-----------TCTTTATTTTGGAAT i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10577227 82 - 21366645 TATAGATTTAATGATGGATTAAAAA--------------------------GAATAAAACTCAAGAGAGATAAACTAC----AAACTTCTCTCTTAT-----------ACTTTATTATGGAAC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3727972 82 - 13033340 TATAGATTTAATGATGGATTAAAAA--------------------------GAATAAAAGTCAATAGAGATAAACTAT----AAACTTCTCCCTTAT-----------ACTTTATTATGGAAC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5220155 82 + 11604778 TATAGATTTAATGATGGATTAAAAA--------------------------GAATAAAAGTCAAGAGAGATAAACTAT----AAACTTCTCTCTTAT-----------ACTTTATTATGGAAC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 128697 81 + 36342412 CATAGAATTAATGATGGATCAAAAA--------------------------GGATAAACGTC-CGAGAGACAAACTAC----AAGCTTTTCATTTGT-----------ACTTTAGTTCCAAGC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13410363 114 + 40214260 --CAGAATCAATGATGGATTTGAAAGGGGTACATCAAAAAAAAGGGGGGGGGAGTACATGTC-----AGAGTAACTAGCCAAAAGCTTCTCTC--TTAAGTGAATATAACGTTACTTTAGAAC i canFam3.chr30 C 0 C 0 e dasNov3.JH579377 1803428 0 - 2868945 C e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=3175951.000000 s hg38.chrUn_KI270749v1 9863 368 + 158759 TTAAAGAACTTATGTATCTAAGTTAATCAGATA-TTTT--TACGTTATTTTTACAAA-AGTACCTATGCAT-----TAATTTAGAA-AG-ATTTTTA-TTGTCTGTTTTCT--ATAAAAATAAAGTGTAAGATTTTACTACTTCTGATAACATTTGCTACAAGTCAATCTATGTCTTCCAAGAAA--ATCTCTTGGTCAGGACTCATACTTGTCCACCAT-GTTTCAGATTTG-ATTTCTTTTCAGAGAGGTAAGATTTGTTGCTGTGTCTCCTTAAATTGAAATAGACGTAATTAATGTGG-CTATAGTGAGAGTCGTCTTCAATATAGTAATTGTGTTCTGAAACAGTCATCTGAAAATGAAATATTTTCTCCTCTAACTGGAGT s panTro5.chr1 101791288 366 - 228573443 TTAAAGAACTTATGTAGCTAAGTTAATCAGATA-TTTT--TATGTTATTTTTACAAA-AGTACCTATGCAT-----TAATTTAGAA-AG-ATTTTTA-TTGTCTCTTTTCT--ATAAAAATAAA--GTAAGATTGTATTACTTCAGATAACATTTGCTATAAGTCAATCTATGTCTTCCAAGAAA--ATCTCTTGGTCAGGACTCATACTTCTCCACCAT-GTTTCAGATTTG-ATTTCTTTTCAGAGAGGTAAGATTTGTTGCTGTGTCTCCTTAAATTTAAATAGATGTAATTAATGTGG-CTATAGTGAGAGTCATCTTCAATATAGTAATTGTGTTCTGAAACATTCATCTTAAAATGAAATATTTTCTCCTCTAACTGGAGT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44369568 365 + 99763055 TTAAAGAACTTGTGTATCTAAGTTAATCAGATA-TTTT--TATGTTATTTTTACAAA-AGTACCTATGCAT-----TAATTTAGAA-AG-ATTTTTA-TTGCGTGTTTTCT--ATAAAAATAAAGTGTAAGATTTTACTACTTCAGATAACATTTGTTATAAGTCAATCTATGTCTTCCAGGAAA--ATCTCTTGGTCAGGGCTCACACTT---CACCAT-GTTTCAGGTTTG-ATTTCTTTTCAGAGAGGTAAGATTTTTTACTGTGTCCCCTTAAATTGAAATAGATGTAATTAATGTGG-CTATAGTGAGATTCATCTTCAATATGGTAATTGTGTTCTGAAACATTCATCTTAAAATGAAATATTTTCTCCTCTAACTGGAAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 659 367 - 24701 TTAAAGAACTTATGTATCTAAGTTAATCAGATA-TTTT--TATGTTA-TTTTACAAA-AGTACCTATGCAT-----TAATTTAGAA-AG-ATTTTTA-TTGTCTGTTTTCT--ATAAAAATAAAGAGTAAGATTTTACTACTTCAGATAACATTTGCTATAAGTCAATCTATGTCTTCCTAGAAA--ATCACTTGGTCAGGACTCATACTTCTCTACCAT-CTTTCAGATTTG-ATTTCTTTTCAGAGTGGTAAGATTTGTTGCTGTGTCTCCTTAAATTGAAATAGACGTAATTAATGTGG-CTATAGTGAGAGTCATCTTCAATATAGTAATTGTGTTCTGAAACATTCATCTTAAAATGAAATATTTTCTCCTCTAACTGGAGT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67500129 363 - 121039945 TTAAAGAACTTGTGTATCTAAGTTAATCAGATA-TTTT--TATGTTATTTTTACAAA-AGTACCTATGCAT-----TAATTTAGAA-AG-ATTTTTA-TTGCGTGTTTTCT--ATAAAAATAAAGTGTAAGATTTTACTACTTCAGATAACATTTGTTATAAGTCAATCCATGTCTTCCAAGAAA--ATCTCTTGGTCAGGGATCATGCTT---CACCAT-GTTTCAGGTTTG-ATTTCTTTTCAGAGAGGTAAGATTTGTTACTGTGTC-CCTTAAATTGAAATAGACGTAATTAACGTGG-CTATAGTGAGAATCATCTTC-ATATAGTAATTGTGTTCTGAAACATTCATCTTAAAATGAAATATTTTCTCCTCTAACTGGAAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23408297 369 + 169600520 TTAAAGAACTTGTGTATCTAAGTTAATCAGATG-TGTT--TATGTTATTTTCACAAA-AGTACCTATGCAT-----TAATTTAGAA-AG-ATTTTTA-CTGCCTGTTTTCT-AAAAAAAATAAAGTGTAAGATTTTACTACTTCAGATAACATTTGTTATAAGTTAATCTATGTCTTCCAAGAAA--ATCTCTTGGTCAGGGCTCATGCTTCTCCACCAT-GTTTCAGGTTTG-ATTTCTTTTCAGAGAGGTAAGATTTGTTACTGTGTCCCCTTAAATTGAAATAGACGTAATTAATGTGG-CTATAGTGAGATTCATCTTTAATATAGTAATTGTGTTCTGAAACATTAATCTTAAAATTAAATGTTTTCTCCTCTAACTGGAAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24012279 369 + 171882078 TTAAAGAACTTGTGTATCTAAGTTAATCAGATG-TGTT--TATGTTATTTTCACAAA-AGTACCTATGCAT-----TAATTTAGAA-AG-ATTTTTA-CTGCCTGTTTTCT-AAAAAAAATAAAGTGTAAGATTTTACTACTTCAGATAACATTTGTTATAAGTTAATCTATGTCTTCCAAGAAA--ATCTCTTGGTCAGGGCTCATGCTTCTCCACCAT-GTTTCAGGTTTG-ATTTCTTTTCAGAGAGGTAAGATTTGTTACTGTGTCCCCTTAAATTGAAATAGACGTAATTAATGTGG-CTATAGTGAGATTCATCTTTAATATAGTAATTGTGTTCTGAAACATTCATCTTAAAATTAAATGTTTTCTCCTGTAACTGGAAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13257416 369 - 40200012 TTAAAGAACTTGTGTATCTAAGTTAATCAGATG-TGTT--TATGTTATTTTCACAAA-AGTACCTATGCAT-----TAATTTAGAA-AG-ATTTTTA-CTGCCTGTTTTCT-AAAAAAAATAAAGTGTAAGATTTTACTACTTCAGATAACATTTGTTATAAGTTAATCTATGTCTTCCAAGAAA--ATCTCTTGGTCAGGGCTCATGCTTCTCCACCAT-GTTTCAGATTTG-ATTTCTTTTCAGAGAGGTAAGATTTGTTACTGTGTCCCCTTAAATTGAAATAGACGTAATTAATGTGG-CTATAGTGAGATTCATCTTTAATATAGTAATTGTGTTCTGAAACATTCATCTTAAAATTAAATGTTTTCTCCTCTAACTGGAAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3245235 370 + 7633303 TTAAAGAACTTGTGTATCTAAGTTAATCAGATG-TGTT--TATGTTATTTTCACAAA-AGTACCTATGCAT-----TAATTTAGAA-AG-ATTTTTA-CTGCCTGTTTTCTAAAAAAAAATAAAGTGTAAGATTTTACTACTTCAGATAACATTTGTTATAAGTCAGTCTATGTCTTCCAAGAAA--ATCTCTTGGTCAGGGCTCATGCTTCTCCGCCAT-GTTTCAGGTTTG-ATTTCTTTTCAGAGAGGTAAGATTTGTTACTGTGTCCCCTTAAATTGAAATAGACGTAATTAATGTGG-CTGTAGTGAGATTCATCTTTAATATAGTAATTGTGTTCTGAAACATTCATCTTAAAATTAAATGTTTTCTCCTCTAACTGGAAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21946401 368 - 58131712 TTAAAGAACTTGTGTATCTAAGTTAATCAGATA-TGTT--TATGTTATTTTCACAAA-AGTACCTATGCAT-----TAATTTAGAA-AG-ATTTTTA-CTGCCTGTTTTCT--AAAAAAATAAAGTGTAAGATTTTACTACTTCAGATAACATTTGTTATAAGTCAATCTATGTCTTCCAAGAAA--ATCTTTTGGTCAGAGCTCATGCTTCTTCACCAT-GTTTCAGGTTTG-ATTTCTTTTCAGAGAGGTAAGATTTGTTACTGTGTCCCCTTAAATTGCAAGAGACGTAATTAATGTGG-CTATAGTGAGATTCATCTTCAATATAGTAAGTGTGTTCTGAAACATTCATCTTAAAATTAAATGTTTTCTCCTCTAACTGGAAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 41289 369 + 2620224 TTAAAGAACTTGTGTATCTAAGTTAATCAGATG-TGTT--TATGTTATTTTCACAAA-AGTACCTATGCAT-----TAATTTAGAA-AG-ATTTTTA-CTGCCTGTTTTCT-AAAAAAAATAAAGTGTAAGATTTTACTACTTCAGATAACATTTGTTATAAGTCAATCTATGTCTTCCAAGAAA--ATCTCTTGGTCAGGGCTCATGCTTCTCCGCCAT-GTTTCAGGTTTG-ATTTCTTTTCAGAGAGGTAAGATTTGTCACTGTGTCCCCTTAAATTGAAATAGACGTAATTAATGTGG-CTATAGTGAGATTCATCTTTAATATAGTAATTGTGTTCTGAAACATTCATCTTAAAATTAAATGTTTTCTCCTCTAACTGGAAT i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10577309 344 - 21366645 TTAAAGAACTTGTCTATCTAAGTTAATCAGATATTTTT--TATGTGATTTTTATAAAAAGTACCTACTCAT-----TAATTTAGAA-AG-ATTTTTA-TTGCATGTTTTCT--ACAAAAATAAAGTGTAATATTTTACCACCCGAGATAACATTTGTTATATGTCAATCTATGT----------------------------CTCATATTTCTCCACCGT-GTGTCAGGTTTG-ATTTCCTTTCAGAGAGGTAAGATTTGCTACTATGTCCCCTTAAATTGAAACAGTTGTAATTAATGTGG-CTATAGTGAAATTCATCTTCAATATAGCAATTGTGTTCTGAACCATTCATCTTAAAATGAAATATTTTCTCCTCTAACTGGAAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3728054 344 - 13033340 TTAAAGAACTTGTGTATCTAAGTTAATCAGATATTTTT--TATGGGATTTTTACAAAAAGTACCTACTCAT-----TAATTTAGAA-AG-ATTTTTA-TTGCATGTTTTCT--ATAAAAATAAAGTGTAAGATTTTAGCACTCGAGATAACATTTGTTATGTATCAATCTATGT----------------------------CTCATATTTCTCCACCAT-GTGTCAGGTTTG-ATTTCCTTTCAGAGAGGTAAGATTTGTTACTGTGTTCCCTTAAATTGAAACAGATGCAATTAATGTGG-CTATAGTGAAATTCATCTTCAGTATAGCAATTGTGTTTTGAACCATTCATCTTAAAATGAAATATTTTCTCCTCTAACTGGAAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5220237 370 + 11604778 TTAAAGAACTTGTGTATCTAAGTTAATCAGATTTTTTT--TATGTGATTTTTACAAACAGTACCTACTCAT-----TAATTTAGAA-AT-ATTTTTA-TTGCATGTTTTCT--ATAAAAACAACGTGTAAGATTTTACCACTCAAGATAACATTTGTTATATGTCAATCTATGTCTTTCGAGAAA--ATCTCTTGGTCGGGGCTCATATTTCTCCACCAT-GTGTCAGGTTTG-ATTTCTTTTCAGAGAGGTAAGATTTGTTACTATGTCCCCTTAAATTGAAACAGATGTAATTAATGTGG-CTATAGTGAAATTCATCTTGAATATAGCAATTGTGTTCTGAAACATTCATCTTAAAATGAAATATTTTCTCCTCTAACTGGAAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 128778 340 + 36342412 TTAA--TATTTGCATATTTAAGTCAATCATACA-TTTTGGGGTATAATTTACATAAAAAGTACCTATGTAT-----AAGTTTAGAA-ATCGTCTTTA-TTGCACGTTTTCT---GAAAATTAAAGTATAAGATTTTACTACTTC----------------------ACTAATGTCTTTCACAAAAATATCTCTTGGGTACAGCATCTAAT----CATGAT-GTTTCAGGTTTT-CTTCCCATTCAGAGAGGGGAGAGCTGACACTATGTCCCTTTAACCCCAAATAGACATAGTTAACATGGCCCATAATCAGAGTCATCTTCAATACAGTAGTCGTATCTGGAACCATTCATTTTAAAATGG------TTCTCCTCTAACTGGAAT i otoGar3.GL873530 C 0 I 181 s canFam3.chr30 13410477 366 + 40214260 TTAAATAATGTATATATCTATATTAATCAGACTCTTGT--AATATGATTTACACAGAAAGTATATATGTAT-----AAATTTAGGA-AA-CTTCTTACTTGTATGTTTTCT--AAATAAATGAAGTTTGTGATTTTACTACTTCAAGTGATATTTGTTATGGATTAGTCCATGTCTTCCACAAAT--ATGTCTTGCTTAGGCCTCACATTTCACCACCATGGTTTTAGGTCTGAATTTCGTTTCAAGAAGATATGACCTGTTACTCTGTATCTTCAAAAC-AAATAAGCATAATTAATGTGGTCCATAACCAGATTCA-CATCAACACAGCAGTTGTATTTTGAAACATTCATCTTCAAATG------TCTCTCCTCTAATTGGAAT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1803428 358 - 2868945 TTAAAAA--TTGTGCATTTATTTT----------TCTG--TATATGATTTATACTAAAAGTGCCTATGTATATATAAATTTTAGAATAC-TTCTTTA-TTGTATGTTTTCT--AAAAATGTAAATTATGGAGTTTTACTACTTCAGATTATATTTGTAATAGAAAAATCAATGTAGT-CAGCAAG--TTCTCTTGGTTTGGGTTCACACTTCATCACCAT-GTTGCTTGTTTG-ATTTTCTTTCAGAGAGATAAAATCTGTTACTATGTCCCTGTGAACACAAATAAACTTAATTAATGTGTTCCTTGGTTGGATTCAACTTCAACATAGCAGTCGTCTCCTGAAACTTTCACCTTACAATGG------CTCCCCTTAAACTGGGCT i dasNov3.JH579377 C 0 C 0 e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=76771.000000 s hg38.chrUn_KI270749v1 10231 8 + 158759 CTTTCATT s panTro5.chr1 101791654 8 - 228573443 CTTTCATT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44369933 8 + 99763055 CTTTCATT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1026 8 - 24701 CTTTCATT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67500492 8 - 121039945 CTTTCATT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23408666 8 + 169600520 CTTTCATT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24012648 8 + 171882078 CTTTCATT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13257785 8 - 40200012 CTTTCATT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3245605 8 + 7633303 CTTTCATT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21946769 8 - 58131712 CTTTCATT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 41658 8 + 2620224 CTTTCATT i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10577653 8 - 21366645 CTTTCATT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3728398 8 - 13033340 CTTTCATT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5220607 8 + 11604778 GTTTCATT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 129299 8 + 36342412 ccatcatt i otoGar3.GL873530 I 181 I 104 s canFam3.chr30 13410843 8 + 40214260 CTTTACCT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1803786 8 - 2868945 CTTTTTTC i dasNov3.JH579377 C 0 C 0 e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=1492393.000000 s hg38.chrUn_KI270749v1 10239 186 + 158759 --TACAATTAACTTAAACTTTT-AGTCTTTACACTG-----------GAAACTCTTCTTTA-----A-AGAAGATATGACTATTTTGTTCTCATAAAAGC-TAGACTCTTGGAGAAGACAGAAAGTGCAACGGCAGGAAGATTAATGTGGATCCTAGAATCTAGAAAGTTGTCTAGA----GAC----TA-----TTTAA------AACGGTTACTGCAAGAAAGC s panTro5.chr1 101791662 185 - 228573443 --TACAATTAACTTAAA-TTTT-AGTCTTTACACTG-----------GAAACTCTTCTTTA-----A-AGAAGATATGACTATTTTGTTCTCATAAAAGC-TAGAGTCTTGGAGAAGACAGAAACTGCAACGGCAGGAAGATTAATGTGGATCCTACAATCTAGAAATTTGTCTAGA----GAC----TA-----TTTAA------AGTGGTTACTGCAAGAAAGC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44369941 186 + 99763055 --TACAATTAACTTAAACTTTT-AGTCTTTACACTG-----------GAGACTCTTCTTTA-----A-AGGAGATGTGACTATTATGTTCTCATAGAAGC-TAGACTCTTGGAGAAGACAGAAACTGCAATGGCAAGAAGATTAATGTGGGTCCTAGAGTCTAGAAAGTTGTCTAGA----GAC----TA-----TTTAA------AATGGTTACTGCAAGAAAGC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1034 186 - 24701 --TACAATTAACTTAAACTTTT-AGTCTTTACACTG-----------GAAACTCTTCTTTA-----A-AGAAGATATGACAATTTTGTTCTCATAAAAGC-TAGACTCTTGGATAAGACAGAAACTGCAACGGCAGGAAGATTAATGTGGATCCTAGAATCTAGAAAGTTGTCTAGA----GAC----TA-----TTTAA------AACGGTTACTGCAAGAAAAC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67500500 185 - 121039945 --TACAATTAACTTAAACTTTT-AGTCTTTACACTG-----------GAGACTCTTCTTTA-----A-AGAAGATGTGACTATTATGTTCTCATAGAAGC-TAGACTCTTGGA-AAGACAGAAACTGCAATGGCAGGAAGATTAGTGTGGGTCCTAGAGTCTAGAAAGTTGTCTAGA----GAC----TA-----TTTAA------AACGGTTACTGCAAGAAAGC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23408674 183 + 169600520 --TACAATTAACTTAAACTTTTAAGTCTTTACACTG-----------GAAACTCTTCTTTA-----A-AGAAGATGTGAGTATTCTGTTCTCGTAGAAGC-TAGATTCTTGGAGAAGACAGAAACTGCAGTGGCAGGAAGATTAATGTGGGTCCTGGAGTCTAGAAAGTTGTCTAGA----GAC-------------CAA------AACAGTTATGGCAAGAAAGC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24012656 183 + 171882078 --TACAATTAACTTAAACTTTTAAGTCTTTACACTG-----------GAAACTCTTCTTTA-----A-AGAAGATGTGAGTATTCTGTTCTCGTAGAAGC-TAGATTCTTGGAGAAGACAGAAACTGCAGTGGCAGGAAGATTAATGTGGGTCCTGGAGTCTAGAAAGTTGTCTAGA----GAC-------------CAA------AACAGTTATGGCAAGAAAGC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13257793 183 - 40200012 --TACAATTAACTTAAACTTTTAAGTCTTTACACTG-----------GAAACTCTTCTTTA-----A-AGAAGATGTGAGTATTCTGTTCTCGTAGAAGC-TAGATTCTTGGAGAAGACAGAAACTGCAGTGGCAGGAAGATTAATGTGGGTCCTGGAGTCTAGAAAGTTGTCTAGA----GAC-------------CAA------AACAGTTATGGCAAGAAAAC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3245613 183 + 7633303 --TACAATTAACTTAAACTTTTAAGCCTTTACACTG-----------GAAACTCTTCTTTA-----A-AGAAGATGTGAGTATTCTGTTCTCGTAGAAGC-TAGACTCTTGGAGAAGACAGAAACTGCAGTGGCAGGAAGATTAATGTGGGTCCTAGAGTCTAGAAAGTTGTCTAGA----GAC-------------CAA------AACAGTTATGGCAAGAAAGC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21946777 182 - 58131712 --TACAATTAACTTAAACTTTT-AGTCTTTACACTG-----------GAAACTCTTCTTTA-----A-AGAAGATGTGACTATTCTGTTCTCGTAGAAGC-TAGACTCTTAGAAAGGACAGAAACTGCAGTGGCAGGAAGATTAATGTGAGTCCTAGAGTCTAGAAAGTTGTCTAGA----GAC-------------AAA------AACAGTTATGGCAAGAAAGC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 41666 183 + 2620224 --TACAATTAACTTAAACTTTTAAGTCTTTACACTG-----------GAAACTCTTCTTTA-----A-AGAAGATGTAAGTATTCTGTTCTCGTAGAAGC-TAGACTCTTGGAGAAGACAGAAACTGCAGTGGCAGGAAGATTAATGTGGGTCCTGGAGTCTAGAAAGTTGTCTAGA----GAC-------------CAA------AACAGTTATGGCAAGAAAGC i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10577661 186 - 21366645 --TACAATTAACTTAAACTTTT-AGTCTTTGAACAG-----------AAAACTCTTCTTTA---------AAGATGTGACTATTTTGTTCTCATAGAAGC-TAGA-CCTAAGAGAAGACAGAAACTAAAATGACAGGAAGATTCATGTGGGTCCTAGAGTCTAGAAAGTTTCCTAGAGACTGAC----TG-----TTTAA------AACAGTTACTGCAAGAAGGC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3728406 186 - 13033340 --TACAATTAACTTAAACTTTT-AGTCTTTGAACAG-----------AAAACTCTTCTTTA-----A-AGAAGATGTGACTATTTTGTCCTCATAGAAGC-CAGGCCCTGAGAGAAGACAGAAAGTAAAATGACAGAAAGATTAATGTGTGTCCTAGAGTCTAGAAAGTTGTCTAGA----GAC----TG-----TTTAA------AATGGTTACTGCAAGAAGGC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5220615 190 + 11604778 --TACAATTAACTTAAACTTTT-AGTCTTTGAACAG-----------AAAACTCTTCTTTA-----A-AGAAGATGTGACTATTTTGTTCTCATAGAAGC-TAGACCCTGAAAGAAGACACAAACTGAAATGACAGGAAGATTAATGTGGGTCCTAGAGTCTAGAAAGTTGTCTAGAGATTGAC----TG-----TTTAA------AACGGTTACTGCAAGAAAGC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 129411 206 + 36342412 --TATGGTTAACTTACACTTTT-AGTCTTTATGTTAGAAATGGTCCTGAAACTCTTTTTTAGTTTAA-GGAAGATGTGAGTATGTTGTTCTCATAAACAC-TGTACCCTCAGAGAAGATAGAAACTCTCATGATGGGAAGATTAATGGAGGTCCTATAGTCCTCAAAGTCATCTAGA----GACTGAATG-----TTTAA------AATGATTACTTCAATGAGGC i otoGar3.GL873530 I 104 C 0 s canFam3.chr30 13410851 193 + 40214260 --TATACTTAAATTATATTTTT--GTTTCTATACTGGAAATGGGCCAAAAATTCTTCATTAGTTTGA-AAAACATGTGACTGTTTTGTTCTCATAAGAGC-TAGACCCTT----------GAAACTGTTAGGGCAGGAAGGCTAATTTGGGACCTGCACTGCAGAAAGTTAGATGGA----ACC-------------TGAATGGTCATTAGTCACTAAGATGAGGC i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1803794 203 - 2868945 TTAACAATTAACTAACACTTTT-CATCTCTCTACAGAATATGGACTTAAAACTCTTCTTTA-----GTTTAATATGTAGCTATTTCTTGCTCATAAAGCTGTGGATTCTCA---AAGATAGAAAAGGTTACGACAGGAAACTTGATGTGGGTGTTATGGTCCACAAAGTTAGCTAGA----AAC----TGAATGTTTAaa------aaaagtcattacagggaagc i dasNov3.JH579377 C 0 I 442 e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=16470.000000 s hg38.chrUn_KI270749v1 10425 2 + 158759 TC- s panTro5.chr1 101791847 2 - 228573443 TC- i panTro5.chr1 C 0 C 0 s panPan2.chr15 44370127 2 + 99763055 TC- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1220 2 - 24701 TC- i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67500685 2 - 121039945 TC- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23408857 2 + 169600520 TC- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24012839 2 + 171882078 TC- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13257976 2 - 40200012 TC- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3245796 2 + 7633303 TC- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21946959 2 - 58131712 TC- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 41849 2 + 2620224 TC- i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10577847 2 - 21366645 TC- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3728592 2 - 13033340 TC- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5220805 2 + 11604778 TC- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 129617 2 + 36342412 TC- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13411044 3 + 40214260 TCG i canFam3.chr30 C 0 C 0 e dasNov3.JH579377 1803997 442 - 2868945 I e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=1698165.000000 s hg38.chrUn_KI270749v1 10427 214 + 158759 AAAAA--GAGAGTAATCAT-TCAGAATAGG------------AAGAGATAGAAATCCTTAAACAATTAAAATAACAATACCAGGTGTGTATAGTCAGAGGGAGAGA---TTTTGCCTATATTATTCTGGGGAGAGAAATAAAATATTTCTGTATAACATCATAGAAATGTAAATGGAGATG-TTAAACTTCTCTGATGGGTAGTTTGAGAAAAACTTTAAAAATTGAAAAG--------------tt s panTro5.chr1 101791849 228 - 228573443 CAAAA--GAGACTAATCAT-TCAGAATAGG------------AAGAGATAGAAACCCTTAAACAATTAAAATAACAATACCAGGTGTGTATAGTCAGAGGGAGAGA---TTTTGCCTCTGTTATTCTGGGGAAAGGAATAAAATATTTCCATATAACATCATAGAAATGTAAATGGAGATG-TTAAACTTCTCTGATGAGTAGTTTGAGAAAAATTTTAAAAATTGAACAGtttttttttttttttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44370129 211 + 99763055 AAAAA--GAGAATAATCAT-TCAGAGTAGG------------AAGAGATAGAAACTCTTAAAC----AAAATAACAATACCAGGTGTGTATAGTCAGAGGAAGAGA---TTTTGCCCGTATTATTCTGGGGAAAGAAAGAAAATATTTTTGTATAACATCATAGAAATGTAAATGGAGATGTTTTAACTTCTCCGATGGGTAATTTGAGAAAAATTTTAAAAATTGAAAAG--------------tt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1222 218 - 24701 AAAAA--GAGAGTAATGAT-TCAGAATAGG------------AAGAGATAGAAATCCTTAAACAATTAAAATAACAATACCAGGTGTGTATAGTCAGAGGGAGAGA---TTTTGCCTATATTATTCTGGGGAGAGAAATAAAATGTTTCTGTATAACATCATAGAAATGTAAATGGAGATG-TTAAACTTCTCTGATGGGTAGTTTGAGAAAAATTTTCAAAATTGAAAAG----------tttttt i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67500687 217 - 121039945 AAAAA--GAGGATAATCAT-TCAGAATAGG------------AAGAGATAGAAACCCTTAAACAATTAAAATAACAATACCAGGTGTGTATAGTCAGAGGAAGAGA---TTTTGCCCATATTATTCTGGGGAAAGAAAGAAAATATTTTTGTATAACATTGTAGAAATGTAAATGGAGATGTTTTAACTTCTCCAATGGGTAGTTTGAGAAAAATTTTAAAAATTGAAAAC------------tttt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23408859 219 + 169600520 AAAAA--GAGAATAATCAT-TCAGAACAGG------------AAGAGATAGAAACCCGTAAACAATTAAAGTCACAATACCAGGTGTGTATAGTCAGAGGGAGAGA---TTTTGCCCATGTTATTCTGGGGAAAGAAATAAAATATTTTTGTATAACATCATAGAAATGTAAATGGCGATATTTTAACTTCTCCAATGGGTAGTTTGAGAAAAATGTTTAAAATTGAAAAG----------TGtttt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24012841 218 + 171882078 AAAAA--GAGAATAATCAT-TCAGAACAGG------------AAGAGATAGAAACCCGTAAACAATTAAAGTCACAATACCAGGTGTGTATAGTCAGAGGGAGAGA---TTTTGCCCATGTTATTCTGGGGAAAGAAATAAAATATTTTTGTATAACATCATAGAAATGTAAATGGCGATATTTTAACTTCTCCAATGGGTAGTTTGAGAAAAATGTTTAAAATTGAAAAG----------TG-ttt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13257978 219 - 40200012 AAAAA--GAGAATAATCAT-TCAGAACAGG------------AAGAGATAGAAACCCTTAAACAATTAAAGTCACAATACCAGGTGTGTATAGTCAGAGGGAGAGA---TTTTGCCCATGTTATTCTGGGGAAAGAAATAAAATATTTTTGTATAACATCATAGAAATGTAAATGGCGATATTTTAACTTCTCCAATGGGTAGTTTGAGAAAAATGTTTAAAATTGAAAAG----------TGtttt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3245798 216 + 7633303 AAAAA--GAGAATAATCAT-TCAGAATAGG------------AAGAGATAGAAACCCTTAAACAATTAAAGTCACAATACCAGGTGTGTATAGTCAGAGGGAGAGA---TTTTGCTCATGTTATTCTGGGGAAAGAAATAAAATATTTTTGTATAACATCATAGAAATGTAAATGGCAATATTTTAACTTCTCCAATGGGTAGTTTGAGAAAAATGTTTAAAATTGAAAAG----------TG---t i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21946961 220 - 58131712 AAAAA--GAGAATAATCAT-TCAGAATAGG------------AAGAGATAGAAACCCTTAAACAACTAAAGTCATAATACCAGGTGTGTATAGTCAGAGGGAGAGA---TTTTGCCCGTGTTATTCTGGGGAAAGAAATAAAATATTTTTGTATAACATCATAGAAATGTAAATGGCGATATTTTAACTTCTCCAGTGGGTAGTTTGAGAAAAATGTTTAAAACTGAAAAG---------TTGtttt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 41851 219 + 2620224 AAAAA--GAGAATAATCAT-TCAGAATAGG------------AAGAGATAGAAACCCTTAAACAATTAAAGTCACAATACCAGGTGTGTATAGTCAGAGAGAGAGA---TTTTGCCCATGTTATTCTGGGGAAAGAAATAAAATATTTTTGTATAACATCATAGAAATGTAAATGGCAATATTTTAACTTCTCCAATGGGTAGTTTGAGAAAAATGTTTAAAATTGAAAAG----------TGtttt i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10577849 209 - 21366645 AAAAA--GAGAATTATTAT-TCAGAATAGG------------AAAAGATAGAAATCC-----CAATTAAAATCACAGTACCAGGTGTGTGTAGTCAGAGGGAGAGA---TTTTGCC-ATGTTATTCTGGGGAAAGAAAGAAAATATTTTTGTATAACATCATAGAAATGTAAATGGAGATGTTTTCATTTCTCTGATGGGTAGTTTGAGAAAAATTTTAAAAACTGAAAAG----------TT---- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3728594 214 - 13033340 AAAAA--AAGAGTTATCAT-TCAGAATAGG------------AGGAGATAGAAATCCTTAAGCAATTAAAATCACAATACCAGGTGTGTGTAGTCAGAGGGAGAGA---TTTTGCC-ATGTTATTCTGGGGAAAGAAAGAAAATATTTTTGTATAACATCATAGAAATGTAAATGGAGATGTTTTAACTTCTCTGATGGGTAGTTTGAGAAAAACTTTAAAAATTGAAAAG----------TT---- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5220807 214 + 11604778 AAAAA--GAGAATTATCAT-TCAGTATAGG------------AAGAGATAGAAATCCTTAAACAATTAAAATCACAATACCAGGTGTGTGTAGTCAGAGGGAGAGA---TTTTGCC-ATGTTATTCTGGGGAAAGAAAGAAAATATTTTTGTATAACATCATAGAAATGTCAATGGAGATGTTTTAACTTCCCTGATGGGTAGTTTGAGAAAAATTTTAAAAATTGAAAAG----------TT---- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 129619 175 + 36342412 AAAAATTAACACTCCTCA---CAGAATAGGTAGGAAGTGAGAGAGAGAGTAAGACCTTTAAGGAATT-AATCCACAGTGCCAGGCATTAATAGTGAGAGAAAGAGA--TTTTTATCCATTCTTTTCTGGACAAAGAAACAAAAT-TTGTTTTATAA-ATAATAGAAATGTAAATAGAGATGTT---------------------------------------------------------------- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13411047 186 + 40214260 AAAAA--AAGAATTAAAAT-TCACCACAGGC-----------TAGAGGGAGAGAAACTTAAGCTATTAAAATCACAACA---------TAT-------GAGAAAGA---TTTTGCCCATTTTATTCTAGTGAAAGAAAAGA------TTTGTTTATCATCTTGGAAATGTAAATAGAGATATTTTAACTGTTCTAATGAGCAGCAAGATAAAGCTTAGAAGAATT---------------------- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1804439 213 - 2868945 AGAGA--AATAAAAATCATAACAGAATGAG------------GAGAGA-GGAGGGGCATGAGCTATTAAAATGGCAATGCTAGTCCTACATAGCATGATGGAGAAATTTTTTTGCCCATGTTATTCCGGAGAAACAGAAAAAATATTGC-GTACATCATCATGGATATGTAAACAGGGAAGTTTTAACTGTTCCAAAAGGTAGCTTGAATAAAAGTTAGAAAA----AAAG----------TT---- i dasNov3.JH579377 I 442 C 0 e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=21116.000000 s hg38.chrUn_KI270749v1 10641 4 + 158759 tttt s panTro5.chr1 101792077 4 - 228573443 tttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44370340 4 + 99763055 tttt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1440 4 - 24701 ttat i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67500904 4 - 121039945 tttt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409078 4 + 169600520 tttt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013059 4 + 171882078 tttt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258197 4 - 40200012 tttt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246014 4 + 7633303 tttt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947181 4 - 58131712 tttt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42070 4 + 2620224 tttt i manLeu1.NW_012108674v1 C 0 C 0 s otoGar3.GL873530 129794 4 + 36342412 TTAA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13411233 4 + 40214260 TTTT i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5221021 0 + 11604778 C e cebCap1.NW_016107324v1 3728808 0 - 13033340 C e dasNov3.JH579377 1804652 0 - 2868945 C e saiBol1.JH378136 10578058 0 - 21366645 C e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=20602.000000 s hg38.chrUn_KI270749v1 10645 6 + 158759 tttttt s panTro5.chr1 101792081 6 - 228573443 tttttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44370344 6 + 99763055 tttttg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1444 6 - 24701 tttttt i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67500908 6 - 121039945 tttttt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409082 6 + 169600520 tttttt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013063 6 + 171882078 tttttt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258201 6 - 40200012 tttttt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246018 6 + 7633303 tttttt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947185 6 - 58131712 tttttt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42074 1 + 2620224 t----- i manLeu1.NW_012108674v1 C 0 C 0 s otoGar3.GL873530 129798 6 + 36342412 TTTCTC i otoGar3.GL873530 C 0 I 34 e aotNan1.NW_018501505v1 5221021 0 + 11604778 C e cebCap1.NW_016107324v1 3728808 0 - 13033340 C e canFam3.chr30 13411237 0 + 40214260 C e dasNov3.JH579377 1804652 0 - 2868945 C e saiBol1.JH378136 10578058 0 - 21366645 C e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=1190195.000000 s hg38.chrUn_KI270749v1 10651 274 + 158759 --gagacggagtcttgctgtgtcatccaggctggagtgcagtggcgccatctcggctcactgcgagctcagcctcctggcttcatgccattctcctgcctcagcctctctagtagc-gggactacaggcccccgccaccacaccaggcta------------------tt--tttttttaaatttttattagagacggggtttcaccttgttagccaggatggtctcaatcttctgacctcgtgatccacctgcctcgacttcccaaagtgctgggaatacaggcgcaagccaccgc s panTro5.chr1 101792087 280 - 228573443 --gagatggagtcttgctgtgtcatccaggctggagtgcagtggcgccatctcagcttactgtgagctcagcctcctgggttcatgccattctccagcctcagcctctcgagtagc-gggactacaggcacctgccaacatgcccggctaa------------ttttttt--tttttttgtatttttattagagacggggtttcaccgtgttagccaggatggtctcaatcttctgaccttgtgatccgcctgcctcgacctcccaaagtgctgggaatacaggcacaagccaatgc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44370350 276 + 99763055 --gagatggagtcttgctctgttgcccaggctagagtgcagtggcaccatctcggctcactgcaagcc--acctcccaggttcatgccattctcctgcctcagcctcccgagtagc-gggactacaggtgcccgccaccacgcccggctta------------att--tt--tttttttgtatttttattagagacggggtttcactgtgctagccaggatggtctcaatcttctgacctcatgatccgcctgcctcggcctcccaaagtgctgggattacaggcgcgagccaccgt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1450 280 - 24701 --gagatggagtctcgctgtgtcatccaggctggagtgcagtggcgccatctcggctcactgcgagctcagcctcctggcttcatgccattctcctgcctcagcctctcgagtagc-gggactacaggcgcccgccaccacgccaggctaa------------ttttttt--tttttttgtatttttattagagacggggtttcaccttgttagccaggatggtctcaatcttctgacctcgtgatccgcctgcctcgacctcccaaagtgctgggaatacaggtgcaagccaccgc i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67500914 282 - 121039945 --gagacggagtcttgttctgtcgcccaggctggagtgcagtggcgccatctcggctcactgcgagctccgcctcccgggttcatgccattctcctgcctcagcctcccgactagt-gggactacaggtgcccgccaccacgcctggctaa------------ttttttttgttttgttttgtttttattagagacgtggtttcactgtgttagccaggatggtctcaatcttctgacctggtgatccacctgcctcggcctcccaaagtgctgggattacaggcgcgagccaccac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409088 293 + 169600520 --gagacagagtcttactctgtcgcccaggctggagtgcagtggtgccatctcgactcactgcaagctctgcctcccgggttcatgccattctcctgcctcagtctcccgagtagctgggactacaggcgcccaccaccatgcccggctaatttttttcttttttttttt--tttttttgtatttttagtagagacaggctttcaccgtgttaaccaggatggtctcaatcttctgacctcgtgatccacccgccccggcctcccaaagtgctgggattacaggcgccagccaccgt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013069 293 + 171882078 --gagacagagtcttactctgtcgcccaggctggagtgcagtggtgccatctcgactcactgcaagctctgcctcccgggttcacgccattctcctgccttagtctcccgagtagctgggactacaggcgcccaccaccatgcccggctaatttttttcttttttttttt--tttttttgtatttttagtagagacatgctttcaccgtgttaaccaggatggtctcaatcttctgacctcgtgatccacccgccccggcctcccaaagtgctgggattacaggcgccagccaccgt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258207 273 - 40200012 --gagacagagtctcactctgtcgcccaggctggagtgcagtggtgccatctcgactcactgcaagctctgcctcccgggttcacgccattctcctgccttagtctcctgagtagctgggactacaggcgcccgccaccacgcccggctaa----------------------ttttttgtatttttagtagagacaggctttcaccgtgttaaccaggatggtctcaatcttctgacctcgtgatccacccgccccggcctcccaaagtgctgggattacaggcgccagccaccat i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246024 282 + 7633303 --gagatagagtctcgctctgtcgcccaggctggagtgcagtggtgccatctcgactcactgcaagctctgcctcccgggttcacgccattctcctgcctcagtctcccgagtagctgggactacaggtgcccaccaccatgcccggctaa-----------tttttttt--tttttttgtatttttagtagagacaggctttcaccgtgttaaccaggatggtctcaatcttctgacctcgtgatccacccgtcccggcctctcaaagtgctgggattacaggcgccagccaccgt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947191 282 - 58131712 agtagacggagtctcgctctgtcgcccaggctggagtgcagtggtgccatctcgactcactgcaagctccgcctcccgggttcacgccattctcctgcctcagtctcccgagtagctgggactacaggcgcccgccaccatgcccggctaa-------------tttttt--tttttttgtatttttagtagagacaggctttcaccgtgttaaccaggatggtctcaatcttctgacctcgtgatccgcccaccccggcctcccaaagtggtgggattacagcggccagccaccgt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42075 281 + 2620224 --tagacagagtctcgctctgtcgcccaggctggagtgcagtggtgccatctcgactcactgcaagctctgcctcccgggttcacgccattctcctgcctcagtctcctgagtagctgggactacaggcgcccaccaccacgcccggctaa------------ttttttt--tttttttgtatttttagtagagacaggctttcaccgtgttaaccaggatggtctcaatcttctgacctcgtgatccacccgtcccggcctcccaaagtgctgggattacaggcgccaaccaccgt i manLeu1.NW_012108674v1 C 0 C 0 e otoGar3.GL873530 129804 34 + 36342412 I e aotNan1.NW_018501505v1 5221021 0 + 11604778 C e cebCap1.NW_016107324v1 3728808 0 - 13033340 C e canFam3.chr30 13411237 0 + 40214260 C e dasNov3.JH579377 1804652 0 - 2868945 C e saiBol1.JH378136 10578058 0 - 21366645 C e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=23222.000000 s hg38.chrUn_KI270749v1 10925 7 + 158759 acagggc s panTro5.chr1 101792367 7 - 228573443 tcaaggc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44370626 7 + 99763055 gcccggc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1730 7 - 24701 gcagggc i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501196 7 - 121039945 gcccggc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409381 7 + 169600520 gcctggc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013362 7 + 171882078 gcctggc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258480 7 - 40200012 gcctggc i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246306 7 + 7633303 gcctggc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947473 7 - 58131712 acctggc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42356 7 + 2620224 gcctggc i manLeu1.NW_012108674v1 C 0 C 0 s otoGar3.GL873530 129838 7 + 36342412 AAATGGC i otoGar3.GL873530 I 34 C 0 e aotNan1.NW_018501505v1 5221021 0 + 11604778 C e cebCap1.NW_016107324v1 3728808 0 - 13033340 C e canFam3.chr30 13411237 0 + 40214260 C e dasNov3.JH579377 1804652 0 - 2868945 C e saiBol1.JH378136 10578058 0 - 21366645 C e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=18393.000000 s hg38.chrUn_KI270749v1 10932 6 + 158759 cAAGAC s panTro5.chr1 101792374 6 - 228573443 cAAGAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44370633 6 + 99763055 cAAGAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1737 6 - 24701 cAAGAT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501203 6 - 121039945 cAAGAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409388 6 + 169600520 TAACAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013369 6 + 171882078 TAACAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258487 6 - 40200012 TAACAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246313 6 + 7633303 TAACAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947480 6 - 58131712 cAACAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42363 6 + 2620224 TAACAT i manLeu1.NW_012108674v1 C 0 C 0 s otoGar3.GL873530 129845 6 + 36342412 TGTTAT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13411237 6 + 40214260 AAAGCT i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5221021 0 + 11604778 C e cebCap1.NW_016107324v1 3728808 0 - 13033340 C e dasNov3.JH579377 1804652 0 - 2868945 C e saiBol1.JH378136 10578058 0 - 21366645 C e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=1381620.000000 s hg38.chrUn_KI270749v1 10938 160 + 158759 TATTGTTTTAAAGTGTGAAAATTGATATTGAATTCT----------TGTGTTTA---TATAAT---AAGGTGTCCTATAATTTCTGTTTGGAATAGAAAATCAGCAACTAATATGTA-T-TTTCAAAGCATTATAAATACAGAGTGC----TAAGTTATTTCACTGTGAAATGTAGTCATAT s panTro5.chr1 101792380 160 - 228573443 TATTGTTTTAAAGTGTGAAAATTAATATTGAATTCC----------TGTGTTTA---TATAAT---ATGGTGTCCTATAATTTCTGTTTGGAATACAAAATCAGCAACCAATATGTA-T-TTTCAAAGCATTATAAATACAGAGTGC----TAAGTTACTTCACTGTGAAATGTAGTCATAT i panTro5.chr1 C 0 I 1122 s panPan2.chr15 44370639 165 + 99763055 TATTGTTTTAAAGTGTGAAAATTAATATTGAATTAT----------TGTTTTTA---TATAAT---ATGGTGTCCTATAATTTCTGTTTGGAATATAAAATCAGCAACTAATATGTATT-TTTCAAAACATTATAAATAAAGAGTGCTAAGTAAGTGACTTCAGTGTGAAATGTAGTCATAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1743 159 - 24701 TATTGTTTTAAAGTGTGAAAATTGATATTGAATTCT----------TGTGTTTA---TATAAT---ATGGTGTCCTACAATTTCTGTTTGGAATATAAAATCAGCAACTAATATGAA---TTTCAAAGCATTATAAATACAGAGTGC----TAAGTTACTTCACTGTGAAATGTAGTCATAT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501209 164 - 121039945 TATTGTTTTAAAGTGTGAAAATTAATATTGAATTAT----------TGTGTTTA---TATAAT---ATGGTGTCCTATAATTTCTGTTTGGAATATAAAATCAGCAACTAATATGTA-T-TTTCAAAACATTATAAATAAAGAGTGCTAAGTAAGTGACTTCAGTGTGAAATGTAGTCATAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409394 157 + 169600520 TGTTGTTTTAAAGTGTGAAAATTAATACCGAATTCT----------TGTGTTTA---TATAAT---ATAGTGTCCTATAATTTCTGTTTGGAATATAAAATCAGCAACTAATATGTA-G-TTTCAAAACATTATAAATAAAGAGTGC----TAAGAGACTTCAGTGTGAAAT---ATCATAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013375 157 + 171882078 TGTTGTTTTAAAGTGTGAAAATTAATACCGAATTCT----------TGTGTTTA---TATAAT---ATAGTGTCCTATAATTTCTGTTTGGAATATAAAATCAGCAACTAATATGTA-G-TTTCAAAACATTATAAATAAAGAGTGC----TAAGAGACTTCAGTGTGAAAT---ATCATAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258493 157 - 40200012 TGTTGTTTTAAAGTGTGAAAATTAATACCGAATTAT----------TGTGTTTA---TATAAT---ATAGTGTCCTATAATTTCTGTTTGGAATATAAAATCAGCAACTAATATGTA-G-TTTCAAAACATTATAAATAAAGAGTGC----TAAGAGACTTCAGTGTGAAAT---ATCATAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246319 157 + 7633303 TGTTGTTTTAAAGGGTGAAAATTAATACTGAATTCT----------TGTGTTTA---TATAAT---ATGGTGTCCTATAATTTCTGTTTGGAATATAAAATCAGCAACTAATATGTA-G-TTTCAAAACATTATAAATAAAGAGTGC----TAAGTGACTTCAGTGTGAAAT---ATCATAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947486 157 - 58131712 TGTTGTTTTAAAGTGTGAAAATTAATACTGAATTCT----------TTTCTTTA---TATAAT---ATGGTGTCCTATAATTTCTGTTTGGAATATAAAATCAGCAACTAATATGTA-G-TTTCAAAACATTATAAATAAAGAGTGC----TAAGTGACTTCAGTGTGAAAT---GTCATAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42369 157 + 2620224 TGTTGTTTTAAAGTGTGAAAATTAATACTGAATTCT----------TGTGTTTA---TATAAT---ATGGTGTCCTATAATTTCTGTTTGGAATATAAAATCAGCAACTAATATGTA-G-TTTCAAAACATTATAAATAAAGAGTGC----TAAGTGACTTCAGTGTGAAAT---ATCATAT i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10578058 160 - 21366645 TATTGTTTTAAAATGTGAAAATTAATATCGAATTCT----------TATCTTTA---TATAAT---ATAGTATCCTAGAATTTCTGTTTGGAATACAAAACCAGCAACTAATATATA-T-TTTCAAAACATTATAAATAAAGAGTGC----TAAGTGACTTTAGTGTGAAATGTAGTCATAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3728808 160 - 13033340 TATTGTTTTAAAGTATGAAAATTAATATTGAATTCT----------TATCTTTA---TATAAT---ATAGTATCCTAGAATTTCTGTTTGGAATACAAAATCAGCAACTAATACATA-T-TTTCAAAACATTATAAATAAAGAGTGC----TAAGTGACTTTAGTGTGAAATGTAGTCATAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221021 160 + 11604778 TATTGTTTTAAAGTGTGAAAATTAGTATTGAATTCT----------TATCTTTA---TATAAT---ATAGTATCCTAGAATTTCTGTTTGGAATACAAAATCTGCAACTAATATATA-T-TTTTGAAACATTATAAATAAAGAGTGC----TAAGTGACTTTAGTGTGAAATGTAGTCATAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 129851 153 + 36342412 TACTGtat--aaatataaaaa---atattgaattctttgaattgaatattttta---tataataCCATAGTGTCCTATAATTTCT--------------ATCAGCAAAAAATATGGA-T-TTTTAAAGTATTA-AAATGAATAGTGT----TAACTGACTTCAGTATGAACTATAGTACTAC i otoGar3.GL873530 C 0 I 4 s canFam3.chr30 13411243 163 + 40214260 TATTGCTGTAAAATATGAAAATAAATATTGAATTAT----------CATGTTTAATTGATACT---ACAGTGCCTTATCTATTCTG-TTAGCATATAAAATCATTAACCAATATAGA-TATTTTAAAATACTGCAAATGAGTGGTAC----TAAGTAAATTTAATGTAAAATGCTGTCATAT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1804652 156 - 2868945 TATAGTTATAATAAATGAAAGTAAACATTGAAGTCT----------TGTGTTTACTTGATACT---GTAGTGTCCTACACCTTCAGTTTGAAATGTAAAATCAGCAACTCATATAGA-T-TTTTAAA-CACTGTAGATGAACAGTGC----TAGGTAA--TAAATGTAAAATGTAGTC---- i dasNov3.JH579377 C 0 C 0 e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=535855.000000 s hg38.chrUn_KI270749v1 11098 68 + 158759 AAAGAATATAATAATTATACTGGATTATTTTT-----------AAATGGGCTGTCTAACATTATATTAAAAGGTTTCAT s panTro5.chr1 101793662 68 - 228573443 AAAGAATATAATAATTATACTGGATTCTTTTT-----------AAATGGGCTGTCTAAGATTATATTAAAAGGTTTCCC i panTro5.chr1 I 1122 C 0 s panPan2.chr15 44370804 68 + 99763055 AAAGAGTATAATAATTCTACTGGATTCTTTTT-----------AAATGGACTGTCTAACATTATATTAAAAGGTTTCCC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1902 68 - 24701 AAAGAATATAATAATTATACTGGATTATTTTT-----------AAATGGGCTGTCTAACATTATATTAAAAGGTTTCAT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501373 68 - 121039945 AAAGACTATAATAATTCTACTGGATTCTTTTT-----------AAATGGACTGTCTAACATTATATTAAAAGGTTTCCC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409551 63 + 169600520 AAAGAATATACTAATT-TACTGGATTCTTTTT-----------AAATG----GTCTAACATTATATTAAAAGGTTTCCC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013532 63 + 171882078 AAAGAATATACTAATT-TACTGGATTCTTTTT-----------AAATG----GTCTAACATTATATTAAAAGGTTTCCC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258650 63 - 40200012 AAAGAATATACTAATT-TACTGGATTCTTTTT-----------AAATG----GTCTAACATTATATTAAAAGGTTTCCC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246476 63 + 7633303 AAAGAATATACTAATT-TACTGGATTCTTTTT-----------AAATG----GTCTAACATTATATTAAAAGGTTTCCC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947643 63 - 58131712 AAAGAATATACTAATT-TACTGGATTCTTTTT-----------AAATC----ATCTAACATTATATTAAAAGGTTTCCC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42526 63 + 2620224 AAAGAATATACTAATT-TACTGGATTCTTTTT-----------AAATG----GTCTAACATTATATTAAAAGGTTTCCC i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10578218 66 - 21366645 AAAAAATATAATCATTGTACTGGATTCTTTTT-----------AAATGGAATTTCTAACAT--TATTAAAAGGTTTCCC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3728968 68 - 13033340 AAAAAATATAATAATTGTACTGTATTCTTTTT-----------AAATGGAATTTCTAACATTATATTAAAAGGTTTCCC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221181 68 + 11604778 AAAAAATATAATAATTGTACTGGATTCTTTTT-----------AAATGGAATTTCTAACATTATATTAAAAGGTTTCCC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 130008 72 + 36342412 AAAGAATATAATAAATTTGGTGGATTCTTTTT-------TAAAAAATAGAATTTCTAACATTATATTAAAAGGTTTCCT i otoGar3.GL873530 I 4 I 22 s canFam3.chr30 13411406 70 + 40214260 AAAGAATGCAATAATTTTGGCAGATTCTCTTT-------ATTTAAATAGAATCACTAACAT--TTTTAAAAAACTTTCT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1804808 76 - 2868945 --AGAGTATAAAAATTTGGTTTCATTTCCTTTTAGTAAAAATAAAATAGATTGG-TAACATTATATTAAAAGGTTTTAC i dasNov3.JH579377 C 0 C 0 e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=128500.000000 s hg38.chrUn_KI270749v1 11166 16 + 158759 CAGTAATTAATTATAT s panTro5.chr1 101793730 16 - 228573443 CAGTAATTCATTATAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44370872 16 + 99763055 CAGTAATTCATTATAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1970 16 - 24701 CAGTAATTCATTATAT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501441 16 - 121039945 CAGTAATTCATCATAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409614 16 + 169600520 CAGTAATTCATTAAAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013595 16 + 171882078 CAGTAATTCATTAAAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258713 16 - 40200012 CAGTAATTCATTAAAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246539 16 + 7633303 CAGTAATTCATTAAAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947706 16 - 58131712 CAGTAATTCATTAAAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42589 16 + 2620224 CAGTAATTCATTAAAT i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10578284 16 - 21366645 CATTAATTCGTTACAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729036 16 - 13033340 CATTAATTTGTCACTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221249 16 + 11604778 CAGTAATTCGTTACAT i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13411476 16 + 40214260 CCGTTATTCATTATCT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1804884 16 - 2868945 CAGTTATTCATTATAT i dasNov3.JH579377 C 0 I 8 e otoGar3.GL873530 130080 22 + 36342412 I e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=74336.000000 s hg38.chrUn_KI270749v1 11182 11 + 158759 CAAAATGCTCC s panTro5.chr1 101793746 11 - 228573443 CAAAAAGCTCC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44370888 11 + 99763055 CAAAATGGTCC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1986 11 - 24701 CAAAATGCTCC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501457 11 - 121039945 CAAAATGGTCC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409630 11 + 169600520 CTAAAAGCTCC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013611 11 + 171882078 CTAAAAGCTCC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258729 11 - 40200012 CTAAAAGCTCC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246555 11 + 7633303 CTAAAAGCTCC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947722 11 - 58131712 CAAAATGCTCC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42605 11 + 2620224 CTAAAAGCTCC i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10578300 11 - 21366645 CAAAATGCTCC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729052 11 - 13033340 GAAAATGCTCC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221265 11 + 11604778 CAAAATGCTCC i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13411492 11 + 40214260 AAAAATGTTCC i canFam3.chr30 C 0 I 11 e otoGar3.GL873530 130080 22 + 36342412 I e dasNov3.JH579377 1804900 8 - 2868945 I e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=467443.000000 s hg38.chrUn_KI270749v1 11193 65 + 158759 Aggccgggcgtggtggcttatgcctgtaatcccagcactttgggaggtcgaagtgggcggatcac s panTro5.chr1 101793757 65 - 228573443 Aggccgggcgtggtggcttatgcctgtaatctcaacattttgggaggtcgaggtgggtggatcac i panTro5.chr1 C 0 C 0 s panPan2.chr15 44370899 65 + 99763055 Aggccaggtgtggtggcttatgcctgtaattccagcactttgggaggccgaggcgcacggatcac i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 1997 65 - 24701 Aggccgggcgtggtggcttatacctgtaatcccagcactttgggaggtcgaagtgggcggatcac i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501468 65 - 121039945 Aggccaggtgtggtggcttatacctgtaatcccaacactttgggaggccaaggcaggcggatcac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409641 65 + 169600520 Aggccaggcgtggtggctcacgcctgtaatcccagcacttcgggaggctgaggcaggcggatcac i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013622 65 + 171882078 Aggccaggcgtggtggctcacgcctgtaatcccagcacttcgggaggctgaggcaggcggatcac i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258740 65 - 40200012 Aggccaggcgtggtggctcacgcctgtaatcccagcacttcgggaggctgaggcaggcggatcac i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246566 65 + 7633303 Aggccaggcgtggtggctcacgcctgtaatcccagcacttcgggaggctgaggcaggcggatcac i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947733 65 - 58131712 Aggccaggcatggtggctgacgcctgtaatcccagcacttcaggaggctgaggcaggcggatcac i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42616 65 + 2620224 Aggccaggcgtggtggctcacgcctgtaatcccagcacttcgggaggctgaggcaggcagatcac i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10578311 65 - 21366645 Aggccaggtgtggtgactcacacctgtaatcccagcactttgggaggctgaagcatgtgaatcat i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729063 65 - 13033340 Aggccgggcgtggtggctcacacctgtaatcccagcactttgggaggctgaagcgtgcgaatcat i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221276 65 + 11604778 Aggccgggtatggtggctcacacctgtaatcccagcactttgggaggctgaggcgtatgaatcat i aotNan1.NW_018501505v1 C 0 C 0 e otoGar3.GL873530 130080 22 + 36342412 I e canFam3.chr30 13411503 11 + 40214260 I e dasNov3.JH579377 1804900 8 - 2868945 I e calJac3.chr10 24181774 1302 + 132174527 I e colAng1.NW_012121598v1 2223516 1720 + 10629787 I a score=481416.000000 s hg38.chrUn_KI270749v1 11258 57 + 158759 ttgaggtcaggagttggagactagcctgaccaacacgatgaaaccccgtctctaata s panTro5.chr1 101793822 57 - 228573443 ttgaggtcaggagttggagaccagcctggccaacatggtgaaaccccgtctctaata i panTro5.chr1 C 0 C 0 s panPan2.chr15 44370964 57 + 99763055 ttgtggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctaata i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2062 57 - 24701 ttgaggtcaggagttggagactagcctggccaacatgatgaaaccccgtctctaata i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501533 57 - 121039945 ttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctaata i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409706 57 + 169600520 ttgaggtcgggaatttgagaccagcctggccaacatggtgaaacctcgtctctaata i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013687 57 + 171882078 ttgaggtcgggaatttgagaccagcctggccaacatggtgaaacctcgtctctaata i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258805 57 - 40200012 ttgaggtcgggaatttgagaccagcctggccaacatggtgaaacctcgtctctaata i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246631 57 + 7633303 ttgaggtcgggaatttgagaccagcctggccaacatggtgaaacctcgtctctaata i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947798 57 - 58131712 ttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctaata i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42681 57 + 2620224 ttgaggtcgggaatttgagaccagcctggccaacatggtgaaaccttgtctctaata i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225236 57 + 10629787 Ttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctaata i colAng1.NW_012121598v1 I 1720 C 0 s saiBol1.JH378136 10578376 57 - 21366645 ttgaggtcagcagtttgagaccagcctgcccaacaaagtaaaaccccatctctacta i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729128 57 - 13033340 ttgaggtcaggagtttgagagcagcctgctcaacaaagtaaaaccccatctctacta i cebCap1.NW_016107324v1 C 0 I 24 s aotNan1.NW_018501505v1 5221341 57 + 11604778 ttgaggtcaggagtttgagaccagcctgcccaacaaagtaaaaccccatctctacta i aotNan1.NW_018501505v1 C 0 I 24 e otoGar3.GL873530 130080 22 + 36342412 I e canFam3.chr30 13411503 11 + 40214260 I e dasNov3.JH579377 1804900 8 - 2868945 I e calJac3.chr10 24181774 1302 + 132174527 I a score=187646.000000 s hg38.chrUn_KI270749v1 11315 35 + 158759 ataaaaaa-aaaaaattagctgggtgtggcggtggg s panTro5.chr1 101793879 35 - 228573443 aaaaaaac-aaaaaatttgctggatgtggtggtggg i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371021 34 + 99763055 a-aaatac-aaaaaattagctgggtgtggtggtggg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2119 35 - 24701 aaaaaaac-aaaaaattagctgggtgtggtggtggg i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501590 34 - 121039945 a-aaatac-aaaaaattagctgggtgtgatggtggg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409763 34 + 169600520 a-aaatac-aaaaaattagctgggtgtggtggtggg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013744 34 + 171882078 a-aaatac-aaaaaattagctgggtgtggtggtggg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258862 34 - 40200012 a-aaatac-aaaaaattagctgggtgtggtggtggg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246688 34 + 7633303 a-aaatac-caaaaattagctgggtgtggtggtggg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947855 35 - 58131712 a-aaatacaaaaaaattagctgggtgtggtggtggg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42738 34 + 2620224 a-aaatac-aaaaaattagctgggtgtggtggtggg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225293 34 + 10629787 a-aaatac-aaaaaattagctgggtgtggtggtggg i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10578433 25 - 21366645 a-aaatac-aaaaaattaccagggcat--------- i saiBol1.JH378136 C 0 C 0 e otoGar3.GL873530 130080 22 + 36342412 I e aotNan1.NW_018501505v1 5221398 24 + 11604778 I e cebCap1.NW_016107324v1 3729185 24 - 13033340 I e canFam3.chr30 13411503 11 + 40214260 I e dasNov3.JH579377 1804900 8 - 2868945 I e calJac3.chr10 24181774 1302 + 132174527 I a score=1020364.000000 s hg38.chrUn_KI270749v1 11350 124 + 158759 caactgtaatctcagctaatcaggaggctgaggcagaagaattgcttgaacttggaaggcagagtttgcagtgtgccaagatcacaccacccca-ctcc-----aacctgggtgatagagcaagactcag s panTro5.chr1 101793914 124 - 228573443 caactataatctcagctaatcaggaggctgaggcaggagaattccttgaacttggaaggcagaggttgcagtttgccaagatcacaccacccca-ctcc-----agcctgggtgatagagcaagactcag i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371055 129 + 99763055 caactgtaatctcagctaatcaggaggctgaggcaggagaattgcttgaacttggaaggcagaggttgcagtgtgccaagatcatgccacccca-ctccggcctggcctgggtgatagagcaagactcag i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2154 124 - 24701 caactgtaatctcagataatcaggaggctgaggcaggagaattgcttgaacgtggaaggcagagtttgcagtgtgccaagatcacaccacccca-ctcc-----aacctgggtgatagagcaagactcag i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501624 125 - 121039945 caactgtaatctcagctaatcaggaggctgaggcaggagaattgcttgaacttggaaggcagaggttgcagtgtgccaagatcatgccaccccatctcc-----ggcctgggtgatagagcaagactcag i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409797 123 + 169600520 cacctgtaatctcagctaatcaggaggccgaggcaggagaatttcttgaacttggaaggcagatgttgcagtgtgccaaaatcatgccacccca-ctct-----ggcctgggtgatagagcaagactca- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013778 123 + 171882078 cacctgtaatctcagctaatcaggaggccgaggcaggagaatttcttgaacttggaaggcagatgttgcagtgtgccaaaatcatgccacccca-ctct-----ggcctgggtgatagagcaagactca- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13258896 124 - 40200012 cacctgtaatctcagctaatcaggaggccgaggcaggagaatttcttgaacttggaaggcagaggttgcagtgtgccaaaatcatgccacccca-ctct-----ggcctgggtgatagagcaagactcag i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246722 124 + 7633303 cacctgtaatctcagctaatcaggaggccgaggcaggagaatttcttgaacttggaaggcagaggttgcagtgtgccaaaatcatgccacccca-ctcc-----ggcctgggtgatagagcaagactcag i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21947890 124 - 58131712 cacctgtaatctcagctaatcaggaggctgaggcaggagaatttcttgaacttggaaggcagaggttgcagtgtgccaaaatcatgccacccta-ctcg-----ggcctgggtgatagagcaagactcag i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42772 124 + 2620224 cacctgtaatctcagctaattaggaggccgaggcaggagaatttcttgaacttggaaggcagaggttgcagtgtgccaaaatcatgccacccta-ctcc-----ggcctgggtgatagagcaagactcag i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225327 124 + 10629787 cacctgtaatctcagctaatcaggaggctgaggcaggagaatttcttgaacttggaaggcagaggttgcagtgtgccaaaatcacgccacccca-ctcc-----ggcctgggtgatagagcaagactcag i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10578458 123 - 21366645 tagctgtaatctcagctaatcaggaggctggggtaggagaatcgcttgaccctgggaggcgaaagttgcagtgagcccagatcacgccactgca-ctac------acctgggtgacagagcaagactcag i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729209 123 - 13033340 tagctgtaatctcagctaatcaggaggctgaggtaggagaatcacttgaccctgggaggcgaaagttgcagtgggcccagatcacgccaccgca-ctcc------acctgggtaatagagcaagactcag i cebCap1.NW_016107324v1 I 24 C 0 s aotNan1.NW_018501505v1 5221422 123 + 11604778 tagctgtaatgtcagctaatcaggaggctgaggtaggagaatcgcttgaccctgagaggcaaaagttgcagtgagcccagatcatgccactgca-ctct------acctgggtgatagagcaagactcag i aotNan1.NW_018501505v1 I 24 C 0 e otoGar3.GL873530 130080 22 + 36342412 I e canFam3.chr30 13411503 11 + 40214260 I e dasNov3.JH579377 1804900 8 - 2868945 I e calJac3.chr10 24181774 1302 + 132174527 I a score=127617.000000 s hg38.chrUn_KI270749v1 11474 18 + 158759 tctcaaggaaaaagaaaa s panTro5.chr1 101794038 18 - 228573443 tctcaaggaaaaaaaaaa i panTro5.chr1 C 0 I 1 s panPan2.chr15 44371184 17 + 99763055 tctcgaggaaaaaaaaa- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2278 18 - 24701 tctcaaggaaaaaaaaaa i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501749 18 - 121039945 tctcaaggaaaaaaaaaa i nomLeu3.chr6 C 0 I 10 s rheMac8.chr7 23409920 18 + 169600520 tctcaagggaaaaaaGGA i rheMac8.chr7 C 0 I 1 s macFas5.chr7 24013901 18 + 171882078 tctcaagggaaaaaaGGA i macFas5.chr7 C 0 I 1 s macNem1.NW_012010577v1 13259020 18 - 40200012 tctcaaGGGAGAAAAGGA i macNem1.NW_012010577v1 C 0 I 1 s cerAty1.NW_012000887v1 3246846 18 + 7633303 tctcaatggaaaaaaGGA i cerAty1.NW_012000887v1 C 0 I 1 s chlSab2.chr26 21948014 18 - 58131712 tctcaaggaaaaaaaaga i chlSab2.chr26 C 0 I 1 s manLeu1.NW_012108674v1 42896 18 + 2620224 tctcaagggaaaaaaGGA i manLeu1.NW_012108674v1 C 0 I 1 s colAng1.NW_012121598v1 2225451 18 + 10629787 tctcaaggaaaaaaaTGA i colAng1.NW_012121598v1 C 0 I 1 s saiBol1.JH378136 10578581 18 - 21366645 tctcaagggaaaaaaaaa i saiBol1.JH378136 C 0 I 1 s cebCap1.NW_016107324v1 3729332 17 - 13033340 tctcaaggg-gaaaaaaa i cebCap1.NW_016107324v1 C 0 I 1 s aotNan1.NW_018501505v1 5221545 18 + 11604778 tctcaaggcaaaaaaaaa i aotNan1.NW_018501505v1 C 0 I 16 s otoGar3.GL873530 130102 10 + 36342412 TCTCCAGGAA-------- i otoGar3.GL873530 I 22 C 0 e canFam3.chr30 13411503 11 + 40214260 I e dasNov3.JH579377 1804900 8 - 2868945 I e calJac3.chr10 24181774 1302 + 132174527 I a score=15418.000000 s hg38.chrUn_KI270749v1 11492 2 + 158759 GC s panTro5.chr1 101794057 2 - 228573443 GC i panTro5.chr1 I 1 C 0 s panPan2.chr15 44371201 2 + 99763055 GC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2296 2 - 24701 GC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501777 2 - 121039945 GC i nomLeu3.chr6 I 10 C 0 s rheMac8.chr7 23409939 2 + 169600520 GC i rheMac8.chr7 I 1 C 0 s macFas5.chr7 24013920 2 + 171882078 GC i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 13259039 2 - 40200012 GC i macNem1.NW_012010577v1 I 1 C 0 s cerAty1.NW_012000887v1 3246865 2 + 7633303 GC i cerAty1.NW_012000887v1 I 1 C 0 s chlSab2.chr26 21948033 2 - 58131712 GC i chlSab2.chr26 I 1 C 0 s manLeu1.NW_012108674v1 42915 2 + 2620224 GC i manLeu1.NW_012108674v1 I 1 C 0 s colAng1.NW_012121598v1 2225470 2 + 10629787 GC i colAng1.NW_012121598v1 I 1 C 0 s saiBol1.JH378136 10578600 2 - 21366645 GC i saiBol1.JH378136 I 1 C 0 s cebCap1.NW_016107324v1 3729350 2 - 13033340 TC i cebCap1.NW_016107324v1 I 1 C 0 e otoGar3.GL873530 130112 0 + 36342412 C e aotNan1.NW_018501505v1 5221563 16 + 11604778 I e canFam3.chr30 13411503 11 + 40214260 I e dasNov3.JH579377 1804900 8 - 2868945 I e calJac3.chr10 24181774 1302 + 132174527 I a score=74902.000000 s hg38.chrUn_KI270749v1 11494 10 + 158759 TCGAAAAATG s panTro5.chr1 101794059 10 - 228573443 TCGAAAAATG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371203 10 + 99763055 TTGAAAAATG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2298 10 - 24701 TCGAAAAATG i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501779 10 - 121039945 TCGAAAAATG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409941 10 + 169600520 TCGAAAAATG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013922 10 + 171882078 TCGAAAAATG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259041 10 - 40200012 TCGAAAAATG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246867 10 + 7633303 TTGAAAAATG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948035 10 - 58131712 TCGAAAAATG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42917 10 + 2620224 TCGAAAAATG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225472 10 + 10629787 TTGAAAAATG i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10578602 10 - 21366645 TTCAAAAATC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729352 10 - 13033340 TTCAAAAATC i cebCap1.NW_016107324v1 C 0 C 0 s otoGar3.GL873530 130112 2 + 36342412 --------TG i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1804908 10 - 2868945 TCCAAGAATG i dasNov3.JH579377 I 8 C 0 e aotNan1.NW_018501505v1 5221563 16 + 11604778 I e canFam3.chr30 13411503 11 + 40214260 I e calJac3.chr10 24181774 1302 + 132174527 I a score=46680.000000 s hg38.chrUn_KI270749v1 11504 4 + 158759 TTTG s panTro5.chr1 101794069 4 - 228573443 TTTG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371213 4 + 99763055 TTTG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2308 4 - 24701 TTTG i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501789 4 - 121039945 TTTG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409951 4 + 169600520 TTTG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013932 4 + 171882078 TTTG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259051 4 - 40200012 TTTG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246877 4 + 7633303 TTTG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948045 4 - 58131712 TTTG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42927 4 + 2620224 TTTG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225482 4 + 10629787 TTTG i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10578612 4 - 21366645 TTTG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729362 4 - 13033340 TTTG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221579 4 + 11604778 TTTG i aotNan1.NW_018501505v1 I 16 C 0 s otoGar3.GL873530 130114 4 + 36342412 TCTG i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1804918 4 - 2868945 TTTA i dasNov3.JH579377 C 0 C 0 e canFam3.chr30 13411503 11 + 40214260 I e calJac3.chr10 24181774 1302 + 132174527 I a score=909693.000000 s hg38.chrUn_KI270749v1 11508 93 + 158759 CTTATTTTGGTAAAATTATTCAATGACTATGCTCAGAAATCAAGCAAACTGTCCATATTTCATTTTTAGAAATTACATATTAAAGATCTAAAA s panTro5.chr1 101794073 88 - 228573443 CT-ATTTTGGTAAAATTACTCATTGACTATGCTCAGAAATCAAGCAAACTGTCCATATTTCATTTTTAGAAATTACATATTAAAGAT----AA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371217 93 + 99763055 CTTATTTTGGTGAAATTATTCATTGACTATGCTCAGAAATCAAGCAAACTGTCCATATTTCATTTTTAGAAATTACGTATTAAAGATCTAAAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2312 93 - 24701 CTTATTTTGGTAAAATTATTCATTGACTATGCTCAGAAATCAAACAAACTGTCCATATTTCATTTTTAGAAATTACATATTAAAGATCTAAAA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501793 93 - 121039945 CTTATTTTGGTAAAATTATTCATTGACTATGCTCAGAAATCAAGCAAACTGTCCATATTTCATTTTTGGAAATTACATATTAAAGATCTAAAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23409955 90 + 169600520 CTTATTTTTGTAAAATTATTCATTGACTATGCTCAGAAATCAAGCAAACTGTCCACATTTTATTTTTAGAAATTACATATTAAAGATCTA--- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24013936 90 + 171882078 CTTATTTTTGTAAAATTATTCATTGACTATGCTCAGAAATCAAGCAAACTGTCCACATTTTATTTTTAGAAATTACATATTAAAGATCTA--- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259055 90 - 40200012 CTTATTTTTGTAAAATTATTCATTGACTATGCTCAGAAATCAAGCAAACTGTCCACATTTTATTTTTAGAAATTACATATTAAAGATCTA--- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246881 90 + 7633303 CTTATTTTTGTAAAATTATTCATTGACTATGCTCAGAAATCAAGCAAACTGTCCATATTTTATTTTTAGAAATTACATATTAAAGATCTA--- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948049 90 - 58131712 CTTATTTTTGTAAAATTATCCATTGACTATGCTCAGAAATCAAGCAAACTGTCCATATTTTATTTTTAGAAATTACATATTAAAGATCTA--- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 42931 90 + 2620224 CTTATTTTTGTAAAATTATTCATTGACTATGCTCAGAAATCAAGCAAACTGTCCATATTTTATTTTTAGAAATTACATATTAAAGATCTA--- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225486 90 + 10629787 CTTATTTTTGCAAAATTATTCATTGACTATGCTCAGAAATCAAGCAAACTGTCCATATTTTATTTTTAGAAATTACATATTAAAGATCTA--- i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10578616 93 - 21366645 CTTATTTTGGCAAAACTGTTTATCAGCTATATGCAGAAATCAAGCAAACTGTCCATATTTTATTTTTAGAAATTACATATTAAAGATCTAAAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729366 92 - 13033340 CTTATTTTGGCAAAACTGTTTATCAACCATGTGCAGAAATCAAA-AAACTGTCCATATTTTATTTTTAGAAATTACATATTAAGGATCTAAAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221583 92 + 11604778 CTTATTTTGGC-AAACTATTTATCAACTATGTGCAGAAATCAAGCAAACTGTCCATATTTTATTTTTAGAAATTACATATTAATGATCTAAAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 130118 93 + 36342412 CTTATTTTGGTAAAATAACTCATTGCATGTGTTCAGGAATCAACCAAATTGCCCATATTTTGTTATCAAAAATTATGCTTTAAAAATCCAAAA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13411514 78 + 40214260 CTTTCTTTGGTAAAATTATT-------------CAGGAGTCAAGAAAATTGCCCGAACTTA--TTTTAGAATTTATAGATTAGAGTTCTAAAA i canFam3.chr30 I 11 C 0 s dasNov3.JH579377 1804922 88 - 2868945 CTTATTTTATTAAGGTTACTCATTATTTATATTTAAAAATCAAGCAAAGTACTGAAATTTTATTTTTAGAAGTTA--TGTTAGGAATTTA--- i dasNov3.JH579377 C 0 C 0 e calJac3.chr10 24181774 1302 + 132174527 I a score=305097.000000 s hg38.chrUn_KI270749v1 11601 35 + 158759 CAAAGGATAAAATA----TCT-----GCAAAAATATTTGCATTT s panTro5.chr1 101794161 35 - 228573443 AAAAGGATAAAATA----TAT-----GCAAAAATACTTGTATTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371310 35 + 99763055 CAAAGGATAAAATA----TAT-----GCAAAAATATTTGTATTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2405 35 - 24701 CAAAGGATAAAATG----TCT-----GCAAAAATATTTGTATTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501886 35 - 121039945 CAAAAGATAAAATA----TAT-----GCAAAAATATTTGTATTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23410045 34 + 169600520 -AAAGGATAAAATA----TAT-----GCAAAAATATTTGTATTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24014026 34 + 171882078 -AAAGGATAAAATA----TAT-----GCAAAAATATTTGTATTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259145 34 - 40200012 -AAAGGATAAAATA----TAT-----GCAAAAATATTTGTATTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3246971 34 + 7633303 -AAAGGATAAAATA----TAT-----GCAAAAATATTTGTATTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948139 34 - 58131712 -AAAGGATAAAATA----TAT-----GCAAAAATATTTGTATTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43021 34 + 2620224 -AAAGGATAAAATA----TAT-----GCAAAAATATTTGTATTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225576 34 + 10629787 -AAAGGATAAAGTA----TAT-----GCAAAAATATTTGTATTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24183076 39 + 132174527 CAAAGGATAAATTATATTTAT-----GCAAAAACATTTGTATTT i calJac3.chr10 I 1302 C 0 s saiBol1.JH378136 10578709 35 - 21366645 ----GGGTAAATTATATTTAT-----GCAAAAACATTTGTATTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729458 39 - 13033340 CAAAAGATAAACTATATTTAT-----GCAAAAACATTTGTATTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221675 39 + 11604778 CAAAGGATAAATTATATTTAT-----GCAAAAACATTTGTATTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 130211 40 + 36342412 TAAAAAGTAACTTA----TATTTACCGAGAACATTTTTATATTT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13411592 19 + 40214260 CAAAGTGTAACTTA----CAT-----TT---------------- i canFam3.chr30 C 0 I 21 s dasNov3.JH579377 1805010 20 - 2868945 -AAAAGGTAACTTG----CAT-----TCAT-------------- i dasNov3.JH579377 C 0 C 0 a score=713851.000000 s hg38.chrUn_KI270749v1 11636 59 + 158759 -CTGGATAAATT-AGT-TTCCTGATTTAACTCCTTG----TTGACACTGAATCTATTTTAAAT------TAA s panTro5.chr1 101794196 63 - 228573443 -GTGGATAAATT-AGT-TTCCTGAGTTAACTCCTTGACTGTTGACATTGAATCTATTTTAAAT------TAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371345 63 + 99763055 -CTGGATAAATT-CGT-TTCCTGAGTTAACTCCTTGACTGTTGACATCAAATCTATTTTAAAT------TAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2440 59 - 24701 -CTGGATAAATT-AGT-TTCCTGATTTAACTCCTTG----TTGACACTGAATCTATTTTAAAT------TAA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501921 63 - 121039945 -CTGGATAAATT-AGT-TTCCTGAGTTAACTCCTTGACTGTTGACATTGAATCAATTTTAAAT------TAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23410079 63 + 169600520 -CTGGATAAATT-AGT-TTCCTGAGTTAACTCCTTGACTGTTGACATTGAATCTATTTTAAAT------TAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24014060 63 + 171882078 -CTGGATAAATT-AGT-TTCCTGAGTTAACTCCTTGACTGTTGACATTGAATCTATTTTAAAT------TAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259179 63 - 40200012 -CTGGATAAATT-AGT-TTCCTGAGTTAACTCCTTGACTGTTGACATTGAATCTATTTTAAAT------TAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247005 63 + 7633303 -CTGGATAAATT-AGT-TTCCTGAGTTAACTCCTTGACTGTTGACATTGAATCTATTTTAAAT------TAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948173 63 - 58131712 -CTGGATAAATT-AGT-TTCCTGAGTTAACTCCTTGACTGTTGACATTGAATCTATTTTAAAT------TAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43055 64 + 2620224 -CTGGATAAATTAAGT-TTCCTGAGTTAACTCCTTGACTGTTGACATTGAATCTATTTTAAAT------TAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225610 63 + 10629787 -CTGGATAAATT-AGT-TTCCTGAGTTAACTCCTTGACTGTTGACATTGAATCTATTTTAAAT------TAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24183115 63 + 132174527 -CTGGATAAATT-AGT-TTCCTGAGTAAACTCCTTGACTGTTGACATTGAATCTATTTTAAAT------TAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10578744 63 - 21366645 -CTGGATAAATT-AGT-TTCCTGAGTAAACTCCTTGACTGTTGACATTGAATCTGTTTTAAAT------TAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729497 63 - 13033340 -CTGGATAAATT-AGT-TTCCTGAGTAAACTCCTTGACTGTTGACATTGAATCTGTTTTAAAT------TAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221714 60 + 11604778 -CTGCATAAATT-AGT-TTCCTGAGTGAACTC---GACTGTTGACATTGAATCTATTTTAAAT------TAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 130251 69 + 36342412 -CTGGATAAACC-AGG-TCCCTGAGTTAACTTGTTGACTGTTGATCTTGAATCTATTTTAAATTAAAAATAA i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1805030 65 - 2868945 CCAGGAAATTTT-GATATTCCTGGGCTACTTCATTGACAGTTGGCTTTCAGTTTGTTTTAAAT------AAA i dasNov3.JH579377 C 0 I 582 e canFam3.chr30 13411611 21 + 40214260 I a score=534067.000000 s hg38.chrUn_KI270749v1 11695 44 + 158759 ACAAGGTGCTGAT-AAAACAAAAGACAAAGAAAGAAATTCAAAAT s panTro5.chr1 101794259 44 - 228573443 ACAAGGTGCTGAT-AAAACAAAAGACAAAGAAGGAAATTCAAAGT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371408 44 + 99763055 ACAAGGTGCTGAT-AAAACAAAAGACAAAGAAAGAAATTCAAAAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2499 44 - 24701 ACAAGGTACTGAT-AAAACAAAAGACAAAGAAAGAAATTCAAAAT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67501984 44 - 121039945 ACAAGGTGCTGAT-AAAACAAAAGAGAAAGAAAGAAATTCAAAAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23410142 40 + 169600520 ACAAGGTGCTGAT-AAAACAAAAGAC----AAAGAAATTCAAAAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24014123 44 + 171882078 ACAAGGTGCTGAT-AAAACAAAAGACAAATAAAGAAATTCAAAAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259242 44 - 40200012 ACAAGGTGCTGAT-AAAACAAAAGACAAACAAAGAAATTCAAAAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247068 44 + 7633303 ACAAGGTGCTGAT-AAAACAAAAGACAAATAAAGAAATTCAAAAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948236 44 - 58131712 ACAAGGTGCTGAT-AAAACAAAAGACAAATAAAGAAATTCAAAAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43119 44 + 2620224 ACAAGGTGCTGAT-AAAACAAAAGACAAATAAAGAAATTCAAAAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225673 44 + 10629787 ACAAGGTGCTGAT-AAAACAAAAGACAAATAAAGAAATTCAAAAT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24183178 44 + 132174527 ACAAAGTGCTGAT-AAAACAAAAGACAAAGAAAGAAATTCAAAAT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10578807 44 - 21366645 ACAAAGTGCTGAT-AAAACAAAAGACAAAGAAAGAAATTCAAAAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729560 44 - 13033340 ACAAAGTGCTGAT-AAAACAAAAGACAAAGAAAGAAATTCAAAAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221774 44 + 11604778 ACAAAGTGCTGat-aaaataaaagacaaagaaagaaattcaaaat i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 130320 45 + 36342412 ACAAGTTTCTTATAAAAACAAATGGCAAAGATAGAAATTCAAATT i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1805677 44 - 2868945 ACAAGTTCCTGAT-AAAACAAAAGGCAAAGAGAGAAGTTCAAAGT i dasNov3.JH579377 I 582 C 0 e canFam3.chr30 13411611 21 + 40214260 I a score=851473.000000 s hg38.chrUn_KI270749v1 11739 70 + 158759 --AAAATTGAAAGATGAAATCAGAGCTTACAAGAGAT-AAAATTTCCTCTGACGGTGTAAAAGAGATCTTCAT s panTro5.chr1 101794303 70 - 228573443 --AAAATTGAAAAATGAAATCAGAACTTACCAGAGAT-AAAATTTCCTCTGACAGTGTAAAAGACATCTTCAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371452 70 + 99763055 --AAAATTGAAAGATGAAATCAGAGCTTATCTGAGAT-AAAATTTCCTCTGACAGTGTAAAAGAGATCTTCAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2543 70 - 24701 --AAAATTGAAAGATGAAATCAGAGCTTACCAGAGAT-AAAATTTCCTCTGACAGTGTAAAAGAGATCTTCAT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67502028 71 - 121039945 --AAAATTGAAAGATGAAATCAGAGCTTATCTGAGATAAAAATTTCCTCTGACAGTGTAAAAGAGATCTTCAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23410182 70 + 169600520 --AAAATTGAAAGATGAAATCAGAGCTTGTCTGAGAT-AAAATTTCCTCTGACAGTGTAAAAGAGATCTTCAT i rheMac8.chr7 C 0 I 321 s macFas5.chr7 24014167 70 + 171882078 --AAAATTGAAAGATGAAATCAGAGCTTGTCTGAGAT-AAAATTTCCTCTGACAGTGTAAAAGAGATCTTCAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259286 70 - 40200012 --AAAATTGAAAGATGAAATCAGAGCTTGTCTGAGAT-AAAATTTCCTCTGACAGTGTAAAAGAGATCTTCAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247112 70 + 7633303 --AAAATTGAAAGATGAAATCAGAGCTTGTCTGAGAT-AAAATTTCCTCTGACAGTGTAAAAGAGATCTTCAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948280 70 - 58131712 --AAAATTGAAAGATGAAATCAGAGCTTGTCTGAGAT-AAAATTTCCTCTGACAGTGTAAAAGAGATCATCAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43163 70 + 2620224 --AAAATTGAAAGATGAAATCAGAGCTTGTCTGAGAT-AAAATTTCCTCTGACAGTGTAAAAGAGATCTTCAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225717 70 + 10629787 --AAAATTGAAAGATGAAATCAGAGCTTGTCTGAGAT-AAAATTTCCTCTGACAGTGTAAAAGAGATCTTCAT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24183222 70 + 132174527 --AAAATTGAAAGATGAAATCAGAGCTTATCTGAGAT-AAAATTTCCTCTGACAGTGTAAAAGAGATCTTCAT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10578851 70 - 21366645 --AAAATTGAAAGATGAAATCAGAGCCTATCTGAGAT-AAAATTTCCTTTGACAGTGTAAAAGTGATCTTCAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729604 70 - 13033340 --AAAATTGAAAGATGATATCAGAGCTTATCTGAGAT-AAAATTTCCTCTGACAGTATAAAAGAGATCTTGAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221818 70 + 11604778 --aaaatTGAAAGATGAAATCAGAGCTTATCTGAGAT-AAAATTTCCTCTGACAGCGTAAAAGAGATCTTCAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 130365 70 + 36342412 --CAAATTGAAAGATGGAACCAGAGCTTATCTGCAAT-AGAATTTCCTGTGACAACACAGAGACGCACATCAT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13411632 70 + 40214260 --AACATTTGAAGTTGGACCTAGAGGTCATCTGGAAT-AAGATTTCTTCTGACAGAATAGAGAAGATCTTCAT i canFam3.chr30 I 21 C 0 s dasNov3.JH579377 1805721 59 - 2868945 AAATATTTGAAAGACAGACCCAGGGCTT-------------ATTTCTCCAGATAGTACAAGGAAATTTTTCA- i dasNov3.JH579377 C 0 C 0 a score=26996.000000 s hg38.chrUn_KI270749v1 11809 2 + 158759 AC s panTro5.chr1 101794373 2 - 228573443 AC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371522 2 + 99763055 AC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2613 2 - 24701 AC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67502099 2 - 121039945 AC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23410573 2 + 169600520 AC i rheMac8.chr7 I 321 C 0 s macFas5.chr7 24014237 2 + 171882078 AT i macFas5.chr7 C 0 I 308 s macNem1.NW_012010577v1 13259356 2 - 40200012 AC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247182 2 + 7633303 AC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948350 2 - 58131712 AC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43233 2 + 2620224 AC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225787 2 + 10629787 AC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24183292 2 + 132174527 AC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10578921 2 - 21366645 AC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729674 2 - 13033340 AC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221888 2 + 11604778 AC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 130435 2 + 36342412 AC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13411702 2 + 40214260 AC i canFam3.chr30 C 0 C 0 e dasNov3.JH579377 1805780 0 - 2868945 C a score=1514321.000000 s hg38.chrUn_KI270749v1 11811 144 + 158759 AAAAAGCAGAATTTATATAGTCTCTTTCCAAAAGACCATAAAACCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAGAGACTGTAAAAG-AAAAAATAATGACACCAAAATCCCTTTTAAATTCAAA-GAGTCATGAAGTTTCA s panTro5.chr1 101794375 144 - 228573443 AAAAAGCAGAATTTATGTAGTCTCTTTCCAAAAGACCAAAAAACCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAGAGACTCTAAAAG-AAAAAATAATGACAACAAAATCCCTTTTAAATTCAAA-GAGTCATAAAGTTTCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371524 143 + 99763055 AAAAAGCAGAATTTATATAGTCTCTTTCCAAAACACCACAAAACCAATCAGTTAATAGTTGATT---------------TT---TATGTGAAA---AAAAGAGAGTATAAAAG-AAAAAATAATGACACCAAAATCCCTTTTAAATTC--A-GAGTCATAAAGTTTCA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2615 144 - 24701 AAAAAGCAGAATTTATATAGTCTCTTTCCAAAAGACCATAAAACCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAGAGACTGTAAAAG-AAAAAATAATGACACCAAAATCTCTTTTAAATTCAAA-GAGTCATAAAGTTTCA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67502101 136 - 121039945 AAAAAGCAGAAT-----AAGTCTCTTTCCAAAAGACCATAAAACCAATCAGTT-ATTGTTGATT---------------TT---TATGTGAAA---AAAAGAGAGTATAGAAG-AAAA---AATGACACCAAAATCTCTTTTAAATTCAAA-GAGTCATAAAGTTTCA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23410575 141 + 169600520 AAAAAGAAGAATTTACATAGTCTCTTTCCAAAAGACCATTAAACCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAAAGAGTGTAAAAG-AAAA---AATGACACCAAAATCCCCTTTAAATTCAAA-GAGTCAAAAAGTTTCA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24014547 141 + 171882078 aaaaagaagaaTTTACATAGTCTCTTTCCAAAAGACCATTAAACCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAAAGAGTGTAAAAG-AAAA---AATGACACCAAAATCCCCTTTAAATTCAAA-GAGTCAAAAAGTTTCA i macFas5.chr7 I 308 C 0 s macNem1.NW_012010577v1 13259358 141 - 40200012 AAAAAGAAGAATTTACATAGTCTCTTTCCAAAAGACCATTAAACCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAAAGAGTGTAAAAG-AAAA---AATGACACCAAAATCCCTTTTAAATTCAAA-GAGTCAAAAAGTTTCA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247184 141 + 7633303 AAAAAGAAGAATTTACATAGTCTCTTTCCAAAAGACCATTAAACCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAAAGAGTGTAAAAG-AAAA---AATGACACCAAAATCCCCTTTAAATTCAAA-GAGTCAAAAAGTTTCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948352 142 - 58131712 AAAAAGAAGAATTTACATAGTCTCTTTCCAAGAGACCATTAATCCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAGAGAGTGTAAAAGAAAAA---AATGACACCAAAATCCCCTTTAAATTCAAA-GAGTCAAAAAGTTTCA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43235 141 + 2620224 AAAAAGAAGAATTTACATAGTCTCTTTCCAAAAGACCATTAAACCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAAAGAGTGTAAAAG-AAAA---AATGACACCAAAATCCCCTTTAAATTCAAA-GAGTCAAAAAGTTTCA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225789 141 + 10629787 AAAAAGAAGAATTTACATAGTCTCTTTCCAAAAGACCATAAAACCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAGAGAGTGTAAAAG-AAAA---AATGACACCAAAATCCCCTTTAAATTCAAA-GAGTCAAAAAGTTTCA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24183294 141 + 132174527 AAAAAGCAGAATTTTTATAGTCTCTTTCCAAAAAAACAT-AAACCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAGCAAGTGTAAAAG-AAAAAATAATGGCACCAAAATCCCTTTTAAATTCAA---AGTCATACTTTTTCA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10578923 141 - 21366645 AAAAAGCAGAATTTTTATAGTCTCTTTCCAAAAGAGCAT-AAGCCAATCAGTTAATGGTTGATT---------------TT---TATGTG-AA---AAAAGAAAGTGTAAAAG-AAAAAATAATGACACCAAAATTCCTTTTAAATTCAA---AGTCATACTTTTTCA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729676 144 - 13033340 AAAAAGCAGAATTTTTATAGTCTCTTTCCAAAAAAGCAT-AAACCAATCAGTTAATAGTTGATT---------------TT---TATGTGAAA---AAAAGAAAGTGTAAAAG-AAAAAATAATGACACCAAGATCCCTTTTAAATTCAAA-GAGTCATACTTTTTCA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5221890 143 + 11604778 AAGAAGCAGAATTTTTATAGTCTCTTTCCAAAAAAGCAT-AAACCAATCAGTTAATAGTTGATT---------------TT---TATGTG-AA---AAAAGAAAGTGTAAAAG-AAAAAATAATGACACCAAAATCTCTTTTAAATTCAAA-GAGTCATACTTTTTCA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 130437 142 + 36342412 CAAAAGCAGAATTTACAGAGCCTCTCTCCAAAAAAGCACAAAACCAACCAGTTAATAGTTGATT---------------TT---TAAGTT-AA---TAAAGGAAGTATAAGAG-ATGA--TAATTATACCAAAATCCCCTTTTAAATTTAA-AAGTCTTAAAGTTTCA i otoGar3.GL873530 C 0 I 292 s canFam3.chr30 13411704 157 + 40214260 AAAGGGCAAAACCT--ATAGTCTCTCACCAAATGGCCATAAAATCTATTAGTTAATAGTTGATCTTACATATATCTTTATT---TACATG-AAAATAAAAGAAAAAATAGACT-AAAA---AATTAGACTAAAATCCTTTTTGAATTCAAAGGGGTTCTAAAGTTTC- i canFam3.chr30 C 0 I 1 s dasNov3.JH579377 1805780 139 - 2868945 AAAAAACAGAATTT--GTAGACTTTCTCCAAAATGGCATACAATGAGCCAGTTAATAGTTGATA---------------TTACATATATA-GA---GGAAG-----GTAAAAG-AGAAAATGATTAGACCAAACTCCATTTAAATACAAAA-GGGCTCTAAGTTTTC- i dasNov3.JH579377 C 0 C 0 a score=855055.000000 s hg38.chrUn_KI270749v1 11955 71 + 158759 -AAAAATGTAATTCAGATAAGAAATTAAtgtcagctacattcttccacagtaaagttt-tgcatcaacttttc s panTro5.chr1 101794519 70 - 228573443 -GAAA-TGTAATTCAGATAAGAAATTAAtgtcagctacattcctccacagtaaaggtt-tccatcaacttttc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371667 70 + 99763055 -AAAA-TGTAATTTAGATAAGAAATTAAtgtcagctacattcctccacagtaaaggtc-tgcatcaatttttc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2759 71 - 24701 -AAAAATGTAATTCAGATAAGAAATTAAtgtcagctacattcttccacagtaaaggtt-tgcatcagcttttc i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67502237 70 - 121039945 -AAAA-TGTAATTTAGATAAGAAATTAAtgtcagctacattcctccacagtaaaggtc-tgcatcaactcttc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23410716 70 + 169600520 -AAAA-TGTAATTCAGATAAGAAATTAAtgtcagctacattcctccacagtcaaggtc-tgcatcaacttttc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24014688 70 + 171882078 -AAAA-TGTAATTCAGATAAGAAATTAAtgtcagctacattcctccacagtcaaggtc-tgcatcaacttttc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259499 70 - 40200012 -AAAA-TGTAATTCAGATAAGAAATTAAtgtcagctacattcctccacagtcaaggtc-tgcatcaacttttc i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247325 70 + 7633303 -AAAA-TGTAATTCAGATAAGAAATTAAtgtcagctacattcctccacagtcaaggtc-tgcatcaacttttc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948494 70 - 58131712 -AAAA-TGTAATTCGGATAAGAAATTAAtgtcagctacattcctccacagtgaaggtc-tgcatcaacttttc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43376 70 + 2620224 -AAAA-TGTAATTCAGATAAGAAATTAAtgtcagctacattcctccacagtcaaggtc-tgcatcaacttttc i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2225930 70 + 10629787 -AAAA-TGTAATTCAGATAAGAAATTAAtgtcagttacattcctccacagtcaaggtc-tgcaccaacttttc i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24183435 70 + 132174527 -AAAA-TGTAATTCAGATAAGAAATTAATGTCAGCCTCATTTCTCCACAGAAAAGGTC-TGCATCAACTTTTC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10579064 70 - 21366645 -AAAA-TGTAATTCAGATAAGAAATTAAtgtcagcctcattcctccacagaaaaggtc-cgcatcaacttttc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729820 70 - 13033340 -AAAA-TGTAATTCAGATAAGAAATTAAtgtcagtctcattcctccacagaaaaggtc-tgcatcaacttttc i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5222033 70 + 11604778 -AAAA-TGTAATTCAGATAAGAAATTAAtgtcagcctcattcctccacagaaaaggtc-tgcatcaacttttc i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 130871 67 + 36342412 -GAAA-TCTAATTCAGATAAGAAAT---TGTCACCTACATTCCACTGCAATAAAGCTC-TCCATCCACCTTTC i otoGar3.GL873530 I 292 C 0 s canFam3.chr30 13411862 70 + 40214260 -AAGG-TCTATGTTAGATAAGAAATTAATGTCAGCTAAATTCAACCACAATAAAGTTC-TCTATGAAATTTTC i canFam3.chr30 I 1 I 179 s dasNov3.JH579377 1805919 58 - 2868945 AAAAA-TCTAATTCAAAT---AAATTAGtgtcagctacattcctccacaataaagttcttgc----------- i dasNov3.JH579377 C 0 C 0 a score=1367132.000000 s hg38.chrUn_KI270749v1 12026 115 + 158759 aactaata-------------------gctttagcattcattagaaaac-ttgtttca-accattattttactaagtgttataacagggtactacattctttcatttttttcttcatttattagctggaataattt s panTro5.chr1 101794589 115 - 228573443 gaatgata-------------------gttttagcattcattagaaaac-ttgtttca-accattattttactaggtgttataacagggtactacattctttcatttttttcttcatttattagctggaataattt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371737 115 + 99763055 acctaata-------------------gttttagcattcattataaatc-ttgcttca-accattatattactaggtgttataacagagtactacattctttcatttttttcttcatttattagctggaataattt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2830 115 - 24701 aactaata-------------------gctttagcattcattagaaaac-ttgtttca-accattattttactaggtgttataagagggtactactttctttcatttttttcttcgtttattagctggaataattt i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67502307 115 - 121039945 acctaata-------------------gttttagcattcattataaaac-ttgcttca-accattatatttctaggtgttataacagagtactacaatctttcatttttttcttaatttattagctgggataattt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23410786 115 + 169600520 acctaata-------------------gttttagcattcattataaaac-ttgcttca-accattattttaccaggtgttataagagggtagtacattctttcatttttttcttcatttattagctggaataattt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24014758 115 + 171882078 acctaata-------------------gttttagcattcattataaaac-ttgcttca-accattattttactaggtgttataagagggtagtacattctttcatttttttcttcatttattagctggaataattt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259569 115 - 40200012 acctaata-------------------gttttagcattcattataaaac-ttgcttca-accattattttactaggtgttataagagggtagtacattctttcatttttttcttcatttattagctggaataattt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247395 115 + 7633303 acctaata-------------------gttttagcattcattataaaac-ttgcttca-accattattttactaggtgttataagagggtagtacattctttcatttttttcttcatttattagctggaataattt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948564 114 - 58131712 acctaata-------------------gttttagcattcattataaaac-ttgcttca-accattattttaccaggtgttataagagggtagtacattctttcatttttttc-tcatttattagctggaataattt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43446 115 + 2620224 acctaata-------------------gttttagcattcattgtaaaac-ttgcttca-accattattttactaggtgttataagagggtagtacattctttcatttttttcttcatttattagctggaataattt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2226000 115 + 10629787 acctaata-------------------gttttagcattcattataaaac-ttgcttca-accattattttactaggtgttataagagggtagtacattctttcatttttttcttcatttattagctggaataattt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24183505 115 + 132174527 ACCTAATA-------------------GTTttagcattcattaaaaaac-ttgcttca-accattattttactaggcattataatagggtagtacattctttcatttttttcttcatgtattagctggaataattt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10579134 114 - 21366645 acctaata-------------------gttttagcattcattataaaac-ttgcttca-accattattttactaggcattataatagggaagtacactctttca-ttttttcttcatttaataactggaataattt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3729890 115 - 13033340 acctaaca-------------------gttttagcattcattataaaac-ttgcttca-accattattttactaggcattataatagggttgtacactctttcatttttttcttcatttattagctggaataattt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5222103 115 + 11604778 acctaata-------------------gttttagcattcattataaaac-ttgcttca-accattattttactaggcattataatagggtagtacattctttcatttttttcttcatttattagctggaataattt i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 130938 113 + 36342412 TCCTAAAG-------------------GTTTAAGTTTTCAGTGTAAAAC-TTGACTCA-CAcattattttactagtcattataaaagggtagtaaattc--tcatctttttcttcattaattaaattaaataattt i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13412111 133 + 40214260 aaccactgagccacccaggctgcccATGTTTTAACTTTCATTGTGAAACTTTGCTTAA-ACAATTAT-TTACTAAACATTATATAAGGGTAGTAAATTGTTTCA-CTTATCCTTGATTTATTAGCTGGTATCATTT i canFam3.chr30 I 179 I 167 s dasNov3.JH579377 1805977 114 - 2868945 aaagtgtg-------------------gttttagtattcattttgaaat-atcccttatgccactattttatcaggtattacaaaatggcagtaaattctatca--ttcttctgcatttattatctgaaatcattg i dasNov3.JH579377 C 0 C 0 a score=1900300.000000 s hg38.chrUn_KI270749v1 12141 166 + 158759 ctaaaagaaca---tttcctcccaaatgtgtattgattacaccaaaacacagtttggacaggaaaaacaagataagtagacaaatg---------cttgacgtttatacccctccccacttttcacagtaatgaattagtgcttcaaacaaactttaatagtgattaaAAACTTATTT s panTro5.chr1 101794704 165 - 228573443 ctaaaagaaca---tttcctcccaaatgtgtattgattacaccaaaacacagtttggacaggaaaagcaagataagtagacaaatg---------cttgatttttagtcccctccacacttttcacagtaatgaattagtgcttcaa-caaactttaaTAGAGATTAAAAACTTATTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44371852 165 + 99763055 ttaaaagaaca---tttcctcataaatgtgtattgattacaccaaaacacagtttggacgggaaaagcaagacaaatagacaaatg---------cttgatttttattcccctccctacttttcacagtaatgaattagtgcttcaa-caaactttaatagtgattaaAAACTTATTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 2945 163 - 24701 ct-aaagaaca---tttcctcccaaatgtgtattgattacaccaaaacacagtttggacaggaaaa-caagataagtagacaaatg---------cttgatttttattcccttccccacttttcacagtaatgaattagtgcttcaa-caaactttaatagtgattaaAAACTTATTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67502422 165 - 121039945 ttaaaagaaca---tttcctcccaaatgtgtattgattacaccaaaacacaatttggaccggaaaagcaagataaataaacacatg---------cttgatttttattcccctccctacttttcacagtaatgaattagtgcttcaa-caaactttaacagtgattaaaaacttattt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23410901 161 + 169600520 ctaaaagaaca---tttcctcccaaatgtgtattgattacaccaaaacacagtttggacaggaaaagtgaga----tagacaaacg---------ttcgatttttattcccctccccacttttcacagtaatgaattagtgcttcaa-caaactttaatggtgattaaAAACTTATTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24014873 161 + 171882078 ctaaaagaaca---tttcctcccaaatgtgtattgattacaccaaaacacagtttggacaggaaaagtgaga----tagacaaacg---------ttcgatttttattcccctccccacttttcacagtaatgaattagtgcttcaa-caaactttaatggtgattaaAAACTTATTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259684 170 - 40200012 ctaaaagaaca---tttcctcccaaatgtgtattgattacaccaaaacacagtttggacaggaaaagtgaga----tagacaaacgatttttattttcgatttttattcccctccccacttttcacagtaatgaattagtgcttcaa-caaactttaatggtgattaaAAACTTATTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247510 161 + 7633303 ctaaaagaaca---tttcctcccaattgtgtattgattacaccaaaacacagtttggacaggaaaagcgaga----tagacaaatg---------ttcgatttttattcccctccccacttttcacagtaatgaattagtgcttcaa-caaactttaatggtgattaaAAACTTATTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948678 161 - 58131712 ctaaaagaaca---ttacctcccaaatgtgtattgattacaccaaaacacagtttggacaggaaaagcgaga----tagacaaatg---------tttgctttttattcccctccccacttttcacagtaatgaattagtgcttcaa-caaactttaatggtgattaaAAACTTATTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43561 161 + 2620224 ctaaaagaaca---tttcctcccaaatgtgtattgattacaccaaaacacagtttggacaggaaaagcgaga----tagacaaatg---------ttcgatttttattcccctccccacttttcacagtaatgaattagtgcttcaa-caaactttaatggtgattaaAAACTTATTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2226115 161 + 10629787 ctaaaagaaca---tttcctcccaaatgtgtattgattacaccaaaacacagtttggacaggaaaagcaaga----tagacaaatg---------cttgatttttattcccctccccacttttcacagtaatgaattagtgcttcaa-caaactttaatggtgattaaAAACTTATTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24183620 163 + 132174527 ctaaaagaaca---tttcctccctaatgtgtattgattacaccaaa--acagtttggacaggaaaagcaagataaatagacaaatg---------cttgatttttattctcttccccacttttcatactaatgaattagtgcttcaa-caAACTTTAATACTGATTAAAAAGTTATTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10579248 165 - 21366645 ctgaaagaaca---tatcctccctaatgtgtattgattacaccaaaacacagtttggacaggaaaagcaagataaatagaaaaatg---------cttgatttttattctcctccccacttttcacagtaatgaattagtgcttcaa-caaactttaaTACTGATTTAAAAGTTATTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3730005 165 - 13033340 ctgaaagaaca---tgtcctccctaatgtgtattgattacaccaaaacacagtttggacaggaaaagcaaaataaatagaaaaatg---------cttgatttttattctcctccccacttttcacagtaatgaattagtgcttcaa-caaactttaatactgattaaaaagttattt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5222218 165 + 11604778 ctaaaagaaca---tttcctccctaatgtgtattgattacaccaaaacacagtttggacaggaaaagcaagataaatagacaaatg---------cttgatttttgttctcctccccacttttcacagtaattaattagtgcttcaa-caaactttaatactgattaaaaagttattt i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 131051 164 + 36342412 ctaaaataata---ttttatccaaaatgtgtgttggtaacctaaaaatatggtttgaaaaagaaaaataaaatgaatagataaaag---------cttgacttcaattctccacca-gccttttaaagggatgaactcgtgcttcag-caaactttaacagttattaaaaatctattt i otoGar3.GL873530 C 0 I 433 s canFam3.chr30 13412411 151 + 40214260 ttaaaaaaa------tttctccctaatatatattggttactctaaaatacagcttgaacagaaaaaaaaaaa-aacaagataaatc---------cttaaatt--actcccttc--------tgaaagtaattaattggtgattcaa-caactttcactagtgatcaaaaaattattt i canFam3.chr30 I 167 C 0 s dasNov3.JH579377 1806091 153 - 2868945 ttaaagcaatgtattttcctccccaatgtttattggttatcccaaactatagtttgaacaggaaaatcaaga------aaaacatg---------cctgatattt---------cccacatttcaaagtaatgagttagtgctccaa-tgacctttaacagcaatcagaaaattgttt i dasNov3.JH579377 C 0 C 0 a score=57596.000000 s hg38.chrUn_KI270749v1 12307 4 + 158759 CCCA s panTro5.chr1 101794869 4 - 228573443 CCCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44372017 4 + 99763055 CCCA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 3108 4 - 24701 CCCA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67502587 4 - 121039945 tcca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23411062 4 + 169600520 CCCA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24015034 4 + 171882078 CCCA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259854 4 - 40200012 CCCA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247671 4 + 7633303 CCCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948839 4 - 58131712 CCCA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43722 4 + 2620224 CCCA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2226276 4 + 10629787 CCCA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24183783 4 + 132174527 CCCa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10579413 4 - 21366645 CCCa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3730170 4 - 13033340 CCCA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5222383 4 + 11604778 CCCA i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13412562 4 + 40214260 ccca i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1806244 4 - 2868945 ccca i dasNov3.JH579377 C 0 C 0 e otoGar3.GL873530 131215 433 + 36342412 I a score=1491161.000000 s hg38.chrUn_KI270749v1 12311 132 + 158759 TAATAAAAATTTTAAGTTTTTGTAAGTAAATGATAAATAATAATTTA-TCCA----GTA---TTTCATGAGTACCTATAATCACCCAGGATCCATTCTCCAAC----------AATGTGGGGAA-AGGAGCCCAGTTTAAAATTCCCATCA s panTro5.chr1 101794873 132 - 228573443 TAATAAAATTTTTAAGTATTTGTAAGCAAACGATAAATAATAATTTA-TCCA----GTA---TTTCATGAGTACCTATAATCAGCCAGGATCCATTCTCCAAC----------AATGGGGGGAA-AGGAGCCCAGTTTAAAATTCCTGTCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44372021 132 + 99763055 TAATACaaattttaaatatttgtaagtaaataataaataataaTTTA-CCCA----GTA---TTTTATGAGTACCTATAATCAGCCAGGAGCCATTCTCCAAC----------AATGTGGGGAA-AGGAGCCCAGCTTAAAATTCCTGTCA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 3112 132 - 24701 TAATAAAAATTTTAAGTTTTTGTAAGTAAATGATAAATAATAATTTA-TCCA----GTA---TTTCATGAGTACCTATAATCAGCCAGGATCCATTCTCCAAC----------AATGTGGGGAA-AGGAGCCCAGTTTAAAATTCCCGTCA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67502591 132 - 121039945 taataaaaattttaaatatttgTAAGTAAATGATAAATAATAATTTA-CCCA----ATA---TTTCATGAGTATCTATAATCAGCCAAGATCCATTCTCCAAC----------AATGCAGGGAA-AGGAGCCCAGCTTAAAATTCCTGTCA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23411066 142 + 169600520 TAATAAAAACTGTAAATATTTGTAAGTAAATGATAAATAATAATTTA-CCCA----GTA---TTTCATTAGTACCTGTAATCAGCTAGGATCCATTCTCCAGCCAGGATCCAAAATGCGGGGAA-AGGAGCCCAGTTTAAAATTCCTGTCA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24015038 142 + 171882078 TAATAAAAACTGTAAATATTTGTAAGTAAATGATAAATAATAATTTA-CCCA----GTA---TTTCATTAGTACCTGTAATCAGCCAGGATCCATTCTCCAGCCAGGATCCAAAATGCGGGGAA-AGGAGCCCAGTTTAAAATTCCTGTCA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13259858 142 - 40200012 TAATAAAAACTGTAAATATTTGTAAGTAATTGATAAATAATAATTTA-CCCA----GTA---TTTCATTAGTACCTGTAATCAGCCAGGATCCATTCTCCAGCCAGGATCCAAAATGCGGGGAA-AGGAGCCCAGTTTAAAATTCCTGTCA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247675 142 + 7633303 TAATAAAAACTGTAAATATTTGTAAGTAAATGATAAATAATAATTTA-CCCA----GTA---TTTCATTAGTACCTGTAATCAGCCAGGATCCATTCTCCAGCCAGGATCCAAAATGCGGGGAA-AGGAGCCCAGTTTAAAATTCCTGTCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948843 142 - 58131712 TAATAAAAACTGTAAATATTTGTAAGTAAATGATAAATAATAATTTA-CCCA----GTA---TTTCATTAGTACCTGTAATCAGCCAGGATCCATTCTCCAGCCAGGATCCAAAATGCGGGGAA-AGGAGCCCAGTTTAAAATTCCTGTCA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43726 142 + 2620224 TAATAAAAACTGTAAATATTTGTAAGTAAATGATAAATAATAATTTA-CCCA----GTA---TTTCATTAGTACCTGTAATCAGCCAGGATCCATTCTCCAGCCAGGATCCAAAATGCGGGGAA-AGGAGCCCAGTTTAAAATTCCTGTCA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2226280 132 + 10629787 TAATAAAAACTGTAAATATTTGTAAGTAAATGATAAATAATAATTTA-CCCA----GTA---TTTCATTCGTACCTGTAATCAGCCAGGATCCATTCTCCAAC----------AATGCGGGGAA-AGGAGCCCAGTTTAAAATTCCTGTCA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24183787 133 + 132174527 taataaaaattttaaatatttGTAAGGAAATGATAAAGAATAATTTACCCCA----GCA---TTTCATGAGTACCTATAATCAGCCAGGATTCATACTCCAGC----------AATGTGGGGAA-AGAAGCCCAGTTTAAAATTCCTGTCA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10579417 132 - 21366645 taataaaaatttaaaatatttGTAAGGAAATGATAAAGAATAATTTA-CCCA----GCA---TTTCATGAGTACCTGTAATCAGCCAGGATTCATTCTCCAGC----------AATGTAGGGAA-AGAAGCCCAGTTTAAAATTCCTGTCA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3730174 132 - 13033340 TAATAAAAAATTAAAATATTTGTAAGGAAATGATAAAGAATAATTTA-CCCA----GCA---TTTCATGAGTACCTGTAATCAGCCAGGATTCATTCTCCAGC----------AATGTCGGGAA-AGAAGCCCAGTTTAAAATTCCTGTCA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5222387 127 + 11604778 TAATAAAAATTTAAAATATTTGTAAGGAAATGATAAAGAATAATTTA-CCCA----GCA---TTTCATGAGTACCTATACTCA-----TATTCATTCTCCAGC----------AATGTGGGGAA-AGAAGCCCAGTTTAAAATTTCTGTCA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 131648 133 + 36342412 taataaaaatttaaaacaattgtaattaaataataaatGATGGTTTA-CCCA----ATA---TTTCATGGCTGCCTACTATACTCCACATTCTATTTTCCAAC----------AAGAAGAGGAAGAATAGCCAGGTTTAATATTCTCATCA i otoGar3.GL873530 I 433 C 0 s canFam3.chr30 13412566 135 + 40214260 taatgaaAATTTTTAAAGTTTGGAAATCAATGACAAATAATAATTCC-TCCA----TCAACTATTCATGGGTGTCTCTTATATACCAACGTCCATTCTCCAAC----------CAGGAGTAGAG-GAGGGCCAGGTTAAAAATTTCTGTCC i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1806248 124 - 2868945 taatgaaAATTTAAAATGCTTAGAAATAAATGATAAATAATAattca-tgcaacagata---ttttatgagtacc-----------agggactattctctaac----------agtg-ggagtg-aggagccaggttaaaaattgctgcca i dasNov3.JH579377 C 0 I 1362 a score=1028894.000000 s hg38.chrUn_KI270749v1 12443 101 + 158759 Ggataccagcaagatgatgaaatagaaagcctcaaagccactccaccctcctct----------------ccaaggagacaccagctagacgataatacacagataaatcccctttg s panTro5.chr1 101795005 101 - 228573443 Ggacaccagcaagatgatgcaatagaaaacctcaaagcccctccaccctcctct----------------ccaaggagacagcagctcgacaataatacacagataaatctcctttg i panTro5.chr1 C 0 C 0 s panPan2.chr15 44372153 101 + 99763055 Ggacaccagcaagatgatgaaatagaaagcctcaaagcccctctaccctcctgt----------------ccaaggagacaccagctcgacaataatacacagataaatcccctttg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 3244 101 - 24701 Ggataccagcaagatgatgaaatagaaagcctcaaagcccctccaccctcctct----------------ccaaggagacaccagctcgacaataatacacagataaatcccctttg i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67502723 101 - 121039945 Ggacaccagcaagatgatgaaatataaagcctcaaagcccctccaccctcctct----------------ccaaggagacaccagctcgacaatactacacagataaatcccctttg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23411208 101 + 169600520 Ggacaccagcaagatgatggaataggaagcctcaaagcccctccacccttctct----------------cccaggagacaccagctcaacaataatacagagataaatcccctttg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24015180 101 + 171882078 Ggacaccagcaagatgatggaataggaagcctcaaagcccctccacccttctct----------------cccaggagacaccagctcaacaataatacagagataaatcccctttg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13260000 96 - 40200012 Ggacaccagcaagatgatggaataggaagcctcaaagcccctccaccctt---------------------ccaggagacaccagctcaacaataatacagagataaatcccctttg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247817 101 + 7633303 Ggacaccagcaagatgatggagtaggaagcctcaaagcccctccacccttctct----------------cccaggagacaccagctcaacaataatacagagataaatcccctttg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21948985 101 - 58131712 Ggacaccagcaggatgacggaataggaagcctcaaagcccctccacccttctct----------------cccaggagacaccagctcgacaataatacagagataaatcccctttg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43868 101 + 2620224 Ggacaccagcaagatgatggaataggaagcctcaaagcccctccacccttctct----------------cccaggagacaccagctcaacaataatacagagataaatcccctttg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2226412 89 + 10629787 GGACACCAGCAAGATGATGGAATAGGAAGCCTCAAAGCCCCTC----------------------------CCAGGAGACACCAGCTTGACAATAATACAGAGATAAATCCCCTTTG i colAng1.NW_012121598v1 C 0 I 2071 s calJac3.chr10 24183920 101 + 132174527 Gggcatcagcaagattatggaatagaaagacttaaagccccttcaccctcctct----------------ccaaggagacaccaactcgacagtaatacagagataaatcctctctg i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10579549 101 - 21366645 Ggacatcagcaagatgatggaataggaagactcaaagccccttcaccctccttt----------------cctaggaaacaccaactcgacaataataaagagataaatcctctttg i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3730306 101 - 13033340 GTacatcagcaagatgatggaataggaagactcaaagccccttcaccctcctct----------------ccaaggagacaccaactcgacaataatacagagataaatcctctttg i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5222514 101 + 11604778 Ggacatcagcaagatgatggaataggaagactcaaagccccttcaccctcatct----------------ccaaggagacaccaactcgacaataatacagagataaatcctctttg i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 131781 108 + 36342412 GGTCATCAACAAGATAATGGA---------CTCAAAAGCCCTGTACACACCTTCTTATAGAAGGCTGGTGTCATAGAGACACCAACTCAGAAAAAATATACAGACCAGTGCCCTTTG i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13412701 89 + 40214260 Agacaccagcaagatagaggaacaaaaaaacccgga----------tattttcc----------------ccacagagacattgactccacagca--acatagactgattccttttg i canFam3.chr30 C 0 C 0 e dasNov3.JH579377 1806372 1362 - 2868945 I a score=2905482.000000 s hg38.chrUn_KI270749v1 12544 303 + 158759 tgaaaagttcagaggcgaatttaaagactctggattccctggtaggcttcaagccaggcacatcaaaaccagcaggtaaatttgttgcactcact----------catcctccttcagca--gtacaacgcaa--tggagagaaagctccaaactcccagctcatctctagggagagaaagaaaagtctagaacatatgt-ccaacattttgactttttgggagggc----------------ACTAGCACCTATCTACCCTGAATCTAAGTGCTAACAGGAAAGGATGCCAAATTGCATGCCTGCTGA----TAAAGCCACAGTTTGGACTGTCACT s panTro5.chr1 101795106 303 - 228573443 tgaaaagtacagaggagaatttaacgactctggattcccgggtaggcttcaagccaggcacatctaaaccagcaggtaaatttgttgcactctct----------catcatccctcagtg--gtacaacgcaa--tggagagaaagctccaaactcccagctcatctctagggagagaacgaaaagtctagaccatatgt-ccaacattttgactttttgggagggc----------------ACTAGCACCTATCTACCCTGAATCTAAGTACTAAAAGGAAAGGATGCCAGATTGCATGCCTGCTGA----TAAAGGCACAGTTTGGACTGTCACT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44372254 318 + 99763055 tgaaaagtacagaaacgaatttaaagactctggattccctggtaggcttcaagccaggcacatctaaaccagcaggtatatttgtggcactcact----------catcctccctcagca--gtacaacgcaa--tagagagaaagctccaaactcccagcttatctctagggagagaaagaaaagtctagatcatatgt-cgaacattttgactttttgggatggca-gggctgcccaaggaactagcacctatctaccctgaatctaagtgctaacaggAAAGGATGCCAGATTGCATGACTGCTGA----TAAAGCCACAGTTTGGACTGTCACT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 3345 302 - 24701 tgaaaagttcagaggcgaatttaaagactctggattccctggtaggcttcaagccaggcacatcaaaaccagcaggtaaatttgttgcactcact----------catcctccctcagga--gtacaacgcaa--tggagagaaagctccaaact-ccagctcatctctagggagagaaagaAAAGTCTTGACCATATGT-CCAACATTTTGACTTTTTGGGAGGGC----------------ACTAGCACCTATCTACCCTGAATCTAAGTGCTAACAGGAAAGGATGCCAGAATGCATGCCTGCTGA----TAAAGTCACAATTTGGACTGTCACT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67502824 317 - 121039945 tggaaagtacagaaacgaatttaaagaccctggattccctggtaggcttcaagccaggcacatctaaaccagcaggtagatttgtggcactcact----------catcctccctcaaca--gtacaacgcaa--tagagagaaagctccaaactcccagcttatctctagggagagaaagaaaagtctagaccatatgt-cgaacattttgactttttaggagggca-gggctgcccaaggaactagcacctatctaccctgaatctaagtgctaacaggAAA-GATGCCAGATTGCATGCCTGCTGA----TAAAGCCACCGTTTGGACTGTCACT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23411309 318 + 169600520 tgaaaagtacagaaactaatttaaagattctggattccctggtaggcttcaagtcaggcacatctaaaccagcaggtaaatttgtggcactcact----------catcctccctcaaca--gtacaatgcaa--tggagagaaagttccaacctcccagcttatcgctagggagagaaagaaaagtctagaccatatgt-ccaacattttgactttttgggagggca-gggctgcccaaggaactagcacctatctACTCTGAATCTAAGTGCTAACAGGAAAGGATACCAGACTGCATGCCTGCTGA----AAAAGCCACAGTTTGAACTGCCACT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24015281 318 + 171882078 tgaaaagtacagaaactaatttaaagattctggattccctggtaggcttcaagtcaggcacatctaaaccagcaggtaaatttgtggcactcact----------catcctccctcaaca--gtacaatgcaa--tggagagaaagttccaacctcccagcttatcgctagggagagaaagaaaagtctagaccatatgt-ccaacattttgactttttgggagggca-gggctgcccaaggaactagcacctatctACTCTGAATCTAAGTGCTAACAGGAAAGGATACCAGACTGCATGCCTGCTGA----AAAAGCCACAGTTTGAACTGCCACT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13260096 318 - 40200012 tgaaaagtacagaaactaatttaaagattctggattccctggtaggcttcaagtcaggcacatctaaaccagcaggtaaatttgtggcactcact----------catcctccctcaaca--gtacaatgcaa--tggagagaaagttccaaactcccagcttatcgctagggagagaaagaaaagtctagaccatatgt-ccaacattttgactttttgggagggca-gggctgcccaaggaactagcacctatctACTCTGAATCTAAGTGCTAACAGGAAAGGATACCAGACTGCATGCCTGCTGA----AAAAGCCACAGTTTGAACTGCCACT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3247918 318 + 7633303 tgaaaagtacagaaactaatttaaagactctggattccctggtaggcttcaagtcaggcacatctaaaccagcaggtaaatttgtggcactcact----------catcctccctcaaca--gtacaatgcaa--tggagagaaagttccaaactcccagcttatcgctagggagagaaagaaaagtctagaccatatgt-ccaacattttgacttttggggagggca-gggctgcccaaggaactagcacctatctACTCTGAATCTAAGTGCTAACAGGAAAGGATACCAGACTGCATGCCTGCTGA----AAAAGCCACAGTTTGAACTGTCACT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21949086 318 - 58131712 tgaaaagtacagaaacgaatttaaagactctggattccccggtaggcttcaagccaggcacatctaaaccagcaggtaaatttgtggcactcact----------catcctccctcaaca--gtacaacgcaa--tggacagaaagttccaaactcccagcttatcgctagggagagaaagaaaagtctagaccatatgt-ccaacattttgactttttgggagggca-gggctgcccaaggaactagcacctatctaccctgaatctaagtgctaacaggAAAGGATGCCAGACTGCACGCCTGCTGA----AAAAGCCACAGTTTGAACTGTCACT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 43969 320 + 2620224 tgaaaagtacagaaactaatttaaagactctggattccctggtaggcttcaagtcaggcacatctaaaccagcaggtaaatttgtggcactcact----------catcctccctcaaca--gtacaatgcaatgtggagagaaagttccaaactcccagcttatcgctagggagagaaagaaaagtctagaccatatgt-ccaacattttgactttttgggagggca-gggctgcccaaggaactagcacctatctACTCTGAATCTAAGTGCTAACAGGAAAGGATACCAGACTGCATGCCTGCTGA----AAAAGCCACAGTTTGAACTGTCACT i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24184021 307 + 132174527 tgaaaagtcc--------------agactctggatttgctggtaagcttgaagccaggcacacctaaaccagtgggtaaatttgaggcactcact----------catcctccctcAGCA--ATACAATGCAA--TGGAGAGAAAGCTCCAAACTCCCAGCTTATCTCTAGGGAGATAAAGAGAAGTCTAGACAACATGT-CCAACATTATGACTTTTTGGGAGGGCA-GGGCTGCCCAAGGGACTAGCACCTATCTTCTCTGAATCTAAGCGCTAACAGGAAAGGATTCCAGATTGCATGCCTGCTGATAG-TAAAGCCACAGTTTGGACTGTcact i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10579650 321 - 21366645 tgaaaagtccagaaatgaatttaaagactctggattcactggtaagcttgaagccaggcacacctaaaacagtgggtaaatttgcggcactcact----------catcctccctcagca--gtacaatgcaa--tggagagaaagctccaaactcctagcttatctctagggagataaagagaagtctagacaacatgt-ccaacattatgactttctgggagggca-gggctgcccaagggactagcacctatcttctctgaatctaagcactaacaggaaaggatgccagattgcattcctgctgataa-taaagccacagtttggactgtcact i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3730407 318 - 13033340 tgaaaagtct-agaatgaatttaaaga--ctggattcgctggtaagcttgaagccaggcacacctaaaccagtgggtaaatttgtggcacttcct----------catcctccctcagca--gtacaatgcaa--tggagagaaagctccaaactcccagcttatctctagggagataaagagaagtctagacaacatgt-ccaacattttgactttttgggagggca-gggctgcccaagggactagcacctatcttccctgaatctaagtgctaacaggAAAGGATGCCAGATTTCATGCCTGCTGATAA-TAAAGCCACAGGTTggactgtcact i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5222615 322 + 11604778 tgaaaagtccagaaatgaatttaaagactctggattcgctggtaagcttgaagccaggcacacctaaaccagtgggtaaatttgtggcactcaat----------catcctccctcagca--gtacaatgcaa--tggagagaaagctccaaactcccagcttatctctagggagataaagagaagtctagacaacatgtcccaacattatgactttttgggagggca-gggctgcccaagggactagcacctatcttccctgaatctaagtgctaagaggaaaggatgccagattgcatgcctgctgataa-taaagccacagtttggactgtcact i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 131889 305 + 36342412 TGAAAA-----------------AAGACTCGTGATGTACTGGTGAGGTTGAAATCAAGTGCATCTGAACCCATCTGTGAATCTGTGGCATTTATT----------CCTctctcctcagcatgggttgatgcaa--ttgggataaatctccaagctcatagcttatctctggagggagaaagataagtctgaatggtatgt-ccagcattctgacattttggg--ggcataagctgcccaagagactggcttctatcttccctgtagcttagcactgacatgacagggtgccagattgggggactgctgagaa-taagggcaTAAATTGAACTAACAGT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13412790 323 + 40214260 tgaaaaatccagaaatcagttaagatgcttctgcaaccctagcaaattctgaattaggagcatcaaagctggtgagaaaaattatgacacccattagctatagtccttcttcccagcata--gcacaatacaa--gtgaaaggaagctcccaactcctggcttcccttccaggataaaaagagaaatatggatcatatat-ccaacaatctgagtttttggag------ggacttcccaagagattggcttctgtcttgcctgcatctaattactgacaggaaaaagcataagg-tgggggaccactgaaaacaaaggcaatggtttggagcatt--- i canFam3.chr30 C 0 C 0 e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=2039373.000000 s hg38.chrUn_KI270749v1 12847 243 + 158759 CAATCACCAtca-ttcctcctgtgactcagtataacaagattgggagaatactctacagttcctgattcccccacagaagtgaaagagaatactgcaacacaca-----------------------ttcagtgttcagat--tttgggggagttgccaagtgattgttttctgtcttgcctgaatttaagcgttaataggaaagctttccaggttggggatattaagaataaatgagttgaggaagtttgggttagcatacattcact s panTro5.chr1 101795409 243 - 228573443 CAATCACCATCA-TTCCTCCTGTGACTCAGTATAACAAGGTTGggagaatactctacagttcctgattcccccacagaagtgaaagagaatactgaaacacata-----------------------ttcagtgttcagac--ttcagaagagttgccaagtgattgttttctgtcttgcctgaatttaagcgctaacaggaaagctttccaggttggggatattaagaacaaatgagttgaggaagtttgggttagcatacattcact i panTro5.chr1 C 0 C 0 s panPan2.chr15 44372572 243 + 99763055 CAATCACCAtca-ttcctcctgtgactcagtataacgagattgggagaatactctacagttcctgattcccccaaaggagtgaaagagaatactgaaacacaca-----------------------ttcaatgttcagac--ttcaggggagttgccaagtgattgttttctgtcttgcctgaatttaagtgctaacaggaaagctttccaggttgggtatattaagaacaaatgagttgaggcagtttgggttagcatacattcact i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 3647 243 - 24701 CAATCACCATCA-TTCCTCCTGTGACTCAGTATAACAAGATTGggagaataccctacagttcctgattcccccacagaagtgaaagagaatactgcaactcaca-----------------------ttcagtgttcagac--ttcaggggagttgccaagtgattgttttctgtcttgcctgaatttaagcgctaacaggaaagctttccaggttggggatattaagaataaatgagttgaggcagtttgggttagcatacattcact i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67503141 243 - 121039945 CAATCACCATCA-TTCCTCCTGTGACTCAGTAAAACAAGATTGGCAGAATACTCTAcagttcctgatttccccaaaggagtgaaagagaatactgaaacacaca-----------------------ttcaatgttcagac--ttcaggggagttgccaagtgattgttttctgtcttgcctgaatttaagtgctaacaggaaagctttccaggttggggatattaagaacaaacgagttgaggcagtttgggttagcatacattcact i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23411627 243 + 169600520 CAATCACCATCA-TTCCTCCTGTGATTTAGTATAACAAGATagggagaatactctacagttcctgattcccccaaaggagtgaaagagaataccgaaacacaca-----------------------ttaaatgttcagac--ttcaggggagctgccacgtgattgttttctgtcttgcctgaatttaagtgctaacaggaaagctttccaggttggggatattaagaacaaatgtgttgaggcagtttgggttagcatacattcact i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24015599 243 + 171882078 CAATCACCATCA-TTCCTCCTGTGATTTAGTATAACAAGATagggagaatactctacagttcctgattcccccaaaggagtgaaagagaataccgaaacacaca-----------------------ttaaatgttcagac--ttcaggggagttgccacgtgattgttttctgtcttgcctgaatttaagtgctaacaggaaagctttccaggttggggatattaagaacaaatgtgttgaggcagtttgggttagcatacattcact i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13260414 243 - 40200012 CAATCACCATCA-TTCCTCCTGTGATTTAGTATAACAAGATagggagaatactctacagttcctgattcccccaaaggagtgaaagagaataccgaaacacaca-----------------------ttaaatgttcagac--ttcaggggagttgccacgtgattgttttctgtcttgcctgaatttaagtgctaacaggaaagctttccaggttggggatattaagaacaaatgcgttgaggcagtttgggttagcatacattcact i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3248236 243 + 7633303 CAATCACCATTA-TTCCTCCTGTGATTTAGTATAACAAGATAGggagaatactctacagttcctgattcccccaaaggagtgaaagagaataccgaaacacaca-----------------------ttaaatgttcagac--ttcaggggagttgccacgtgattgttttctgtcttgcctgaatttaagtgctaacaggaaagctttccaggttggagatattaagaacaaatgcgttgaggcagtttgggttagcatacattcact i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21949404 242 - 58131712 CAATCACCATCA-CTCCTCCTGTGATTCAGTATAACAGGATagggagaatactctacagttcctgattcccccaaaggagtgaaaaagaataccgaaacacaca-----------------------ttgaatgttcagac--ttcaagggagttgccacgtgattgttttctgtcttgcctgaatttaggtgctaacaggaaagc-ttccaggttggggatattaagaacaaatgcgttgaggcagtttgggttagcatacattcact i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 44289 243 + 2620224 CAATCACCATCA-TTCCTCCTGTGATTTAGTATAACAAGATagggagaatactctgcagttcctgattcccccaaaggtgtgaaagagaataccgaaacacaca-----------------------ttaaatgttcagac--ttcaggggagttgccacgtgattgttttctgtcttgcctgaatttaagtgctaacaggaaagctttccaggttggggatattaagaacaaatgcgttgaggcagtttgggttagcatacattcact i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24184328 238 + 132174527 cactcacc----tttcctcccttgactcggcataacgagattgggagaatactc-acagttcctgatttccccaaaaaagtgaaaaagaataatgaaacacaca-----------------------tttaatgttcagac--ttca-gggagttgtcaagtgattgttttctgtcttgcctgAATTTAAATGCTAACAGGAAAGCTTTCCAGGTTAGGGATATTGAGAACAAATGAGTTGAGGCAGTTTGGGTTAGCATGCATTCGCT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10579971 241 - 21366645 cactcgccatcatttcctcccttgactcggcataacgagattgggagaacactc-acagttcctgatttccccaaaggagtgaaagtgaacactgaaacacaca-----------------------cttaatgttcagac--ttca-gggagttgtcaagtgattgttttctgtcttgcctgAATTTAAATGCTAACAGGAAAACTTTCCAGGTTGGGGATATTGAGAACAAATTAGTTGAGGCAGTTTGGGTTC-CATGCATTTGCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3730725 242 - 13033340 cactcgacatcatttcctcccttgactcggcataacgagattgggagaatactc-acagttcctgatttccccaaaggagtgaaagagaatactgaaacgcaca-----------------------tttaatgttcagac--ttca-gggagttgtcaagtggttgttttctgtcttgcctgAATTTAAATGCTAACAGGAAAGCTTTCCAGGTTGGGGATATTGAGAACGAATGATTTGAGGCAGTTTGGGTTTGCATGCATTTGCT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5222937 239 + 11604778 cactcgccatcatttcctccctttactcggcataacgagattgggagaatactc-acagttcctgatttccccaaaggagtgaaagagaatactgaaacacaca-----------------------tttaatgttcagac--ttca-gggagtt---aagtgattgttttctgtcttgcctgaatttaaatgctaacaggaaagctttccaggttggggatattgagaacaaatgagttgaggcagtttgggttagcatgcattcgct i aotNan1.NW_018501505v1 C 0 I 22 s canFam3.chr30 13413113 246 + 40214260 cactcactgtag-tccctc---tgacccaatgtggaatgagtagaagaaaactc-ccaagtcctggattccccctgggatggaaataacgtgtgtgtgtgcgcacgtgtgtgtgttgtatgtatgtgtccaatgttccaccttttccagggactactgaaaagactggtttctgttttgtct--atttaagtgc-actgatgagacctagcatactctagatgtttggca---------------agttctgaaaacaagaaATCTACA i canFam3.chr30 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=139005.000000 s hg38.chrUn_KI270749v1 13090 21 + 158759 tatcatatcatccttccctg---g s panTro5.chr1 101795652 21 - 228573443 tatcgtaccatccttccctg---g i panTro5.chr1 C 0 C 0 s panPan2.chr15 44372815 21 + 99763055 tatcatactctccttccctg---g i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 3890 21 - 24701 tatcatatcatccttccctg---g i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67503384 21 - 121039945 tatcatactctccttccctg---g i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23411870 21 + 169600520 tatcatactctccttgcctg---g i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24015842 21 + 171882078 tatcatactctccttgcctg---g i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13260657 21 - 40200012 tatcatactctccttgcctg---g i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3248479 21 + 7633303 tatcatactctccttgcctg---g i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21949646 21 - 58131712 tatcatactctccttcgctg---g i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 44532 21 + 2620224 tatcatactctccttgcctg---g i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24184566 21 + 132174527 TATCATACTCTCCCTCCCTG---G i calJac3.chr10 C 0 I 22 s saiBol1.JH378136 10580212 24 - 21366645 TATCATACTCTCCCTCCCAGGGAG i saiBol1.JH378136 C 0 I 22 s cebCap1.NW_016107324v1 3730967 21 - 13033340 TATCATACTCTCCCTCCCTG---G i cebCap1.NW_016107324v1 C 0 I 22 s canFam3.chr30 13413359 21 + 40214260 TGACTTGCTACTGTTCCGAA---G i canFam3.chr30 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e aotNan1.NW_018501505v1 5223176 22 + 11604778 I e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=1664530.000000 s hg38.chrUn_KI270749v1 13111 191 + 158759 --atcaatatgcaatgagtggg-ataaaaccctcatc-tcctggcttccccttggagaaggaaaaagctggagtgtgcatccagaatttcaacttttcccagtcagcctgacggactgttttctgtctgaccGGA--------TACTCTTCATGT-CTGAGGACTG----CTGAGAACAAAAGAGAGCT-AGGGGGTTATAGCAACTCC s panTro5.chr1 101795673 190 - 228573443 --atcaagatgcagtgagtggg-agaaaaccctgaac-tcctggcttccccttgtagaaggaaaaagctggagtgtgcatccagaattccaacttttcccagtcagcctgacggactgttttctgtctgaccggA--------TACTCTTGATGT-CTGAGGACTG----CTGAGAACAAAAGAGAGCT--GGGGGTTATAGCAATTCC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44372836 191 + 99763055 --atcaatatgcaaagtgtggg-agaaaaccctcaac-tcctggcttctccttggagaaggaaaaagctggaGTGTGCATTCAGAATTCCAACTTTTCCTAGTCAGCCTGAGGGACTGTTTTCTGTCTGACCTGA--------TACTCTTGATGT-CTGAGAACTG----CTGAGAACAAAAGAGAGCT-AGGGGATTACAGCAACTCC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 3911 191 - 24701 --atcaatatgcaatgagtggg-acaaaaccctcaac-tcctggcttccccttggagaaggaaaaATCTGGAGTGTGCATCCAGTATTCCAACTTTTCCCAGTCAGCCTGACAGACTGTTTTCTGTCTGACCGGA--------TACTCTTGATGT-CTGAGGACTG----CTGAGAACAAAAGAGAGCT-AGGGGGTTATAGCAACTCC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67503405 191 - 121039945 --atcaatatgcaatgagtggg-agatacccctcaac-tcctggcttctccttggagaaggaaaaagctggagtgtgcatccagaattccaacttttcccagtcagcctgagggactgttttctgtctgacctgA--------TACTCTTGATGT-CTGAGGACTG----CTGAGAACAAAAGAGAGCT-AGGGGGTTACAGCAACTCC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23411891 191 + 169600520 --atcaatatgcaatgagtggg-agaaaaccctcaac-tcctggcttctccttggagaaggaaaaagctggagtgtgcatccagaattccaactttccccagtcagcctgagggactgttttctgtctgacctgA--------TACTCTTGATGT-CTGAGGACTG----CTGAGAACAAAAGAGAGCT-AAGGGGTTACAGCAACTCC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24015863 191 + 171882078 --atcaatatgcaatgagtggg-agaaaaccctcaac-tcctggcttctccttggagaaggaaaaagctggagtgtgcatccagaattccaactttccccagtcagcctgagggactgttttctgtctgacctgA--------TACTCTTGATGT-CTGAGGACTG----CTGAGAACAAAAGAGAGCT-AAGGGGTTACAGCAACTCC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13260678 191 - 40200012 --atcaatatgcaacgagtggg-agaaaaccctcaac-tcctggcttctccttggagaaggaaaaagctggagtgtgcatccagaattccaactttccccagtcagcctgagggactgttttctgtctgacctgA--------TACTCTTGATGT-CTGAGGACTG----CTGAGAACAAAAGAGAGCT-AAGGGGTTACAGCAACTCC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3248500 190 + 7633303 --atcaatatgcaacgagtggg-agaaaaccctcaac-tcctggcttctccttggagaagg-aaaagctggagtgtgcatccagaattccaactttccccagtcagcctgagggactgttttctgtctgacctgA--------TACTCTTGATGT-CTGAGGACTG----CTGAGAACAAAAGAGAGCT-AAGGGGTTACAGCAACTCC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21949667 191 - 58131712 --atcaatatgcaatgagtggg-agaaaaccctcaac-tcctggcttctccttggagtaggaaaaagctggagtgtgcatccagaattccaactttccccagtcagcccgagggactgttttctgtctgacctgA--------TACTCTTGATGT-CTGAGGACTG----CTGAGGACAAAAAAGAGCT-AGGGGGTTACAGCAACTCC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 44553 191 + 2620224 --atcaatatgcaacgagtggg-agaaaaccctcaac-tcctggcttttccttggagaaggaaaaagctggagtgtgcatccagaattccaactttccccagtcagtctgagggactgttttctgtctgacctgA--------TACTCTTGATGT-CTGAGAACTG----CTGAGAACAAAAGAGAGCT-AAGGGGTTACAGCAACTCC i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24184609 190 + 132174527 --ATCATTATGGAATGAGTAGG-AGAAAACCCTCAAC-TCCTGGTTTCTCATTGGAGAAGGAAAAAGCTGGAGCACACATCTAGAATTCCAACTTTTCCCAGTCAGGCTGAGAGACTGCTTTCTGTCTGACCTGA--------TACTCTTGATGT-CTGGGGACTG----CTGAGAACAGAAGAGAGCT--AGGGGTCATAGCAACTCC i calJac3.chr10 I 22 I 126 s saiBol1.JH378136 10580258 194 - 21366645 --ATCATTATGGAATGAGTagg-agaaaaccctcaac-tcctggcttctcattggagaaggaaaaagctggagtgcacatctagaattccaacttttcccagtcaggctgagagactgctttctgtctgacctgA--------TAGTCTTGATGT-CTGGGGACTGACTACTGAGAACAAAAGAGAGCT--GGGGGTTATAGCAACTCC i saiBol1.JH378136 I 22 C 0 s cebCap1.NW_016107324v1 3731010 190 - 13033340 --ATCATCGTGgaatgagtagg-agaaaaccctcaac-tcctggcttctcgctgaagaaggtaaaagctggagtgcacatctagaattccagcttttcccagtcaggctgagagactgctttctgtctgacctgA--------TACTCTTGATGT-CTGAGGACTG----CTGAGAACAAAAGATAGCT--GGGGGTTATGGCAACTCT i cebCap1.NW_016107324v1 I 22 C 0 s aotNan1.NW_018501505v1 5223198 190 + 11604778 --atcattatggaatgaatagg-agaaaactctcaac-tcctggcttctcatttgagaaggaaaaagctggaatgtgcatctagaattccaacttttcccagttaggctgagagactgctttctgtctgacctgA--------TACTCTTGATGT-CTGGGGACTG----CTGAGAACAAAAGAGAGCT--GGGGGTTAGAGCAACTCC i aotNan1.NW_018501505v1 I 22 C 0 s canFam3.chr30 13413380 205 + 40214260 GGTCCACAGTATAGCAAACAGGCAGATACAGCTCAGCGGCCTGGCCCCTCAAGGACTGAAGCTAAGAGTGGAGCACACATCCAACTTTGAGGCTTTTGTGGGAGCTGCCTAGTGACTGGTTTCTGTTGCACTTGACTTCTTGTTTCACTTGGGGCACAGGTGTCCC----CTGAGAACAAAAGAGAAGTGAAAAGTTTACAACAGCACC i canFam3.chr30 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=5022428.000000 s hg38.chrUn_KI270749v1 13302 624 + 158759 AGATAACCTACAGTACTACAGATAGATAACAAAGAGAGCAAGAGATTACATGCTCCTGA-AGAAAGACCTGCAAATTTTTCTCA----GAATTTACACACA-ATTTCAGAGACAATACATTCAcaga--a-agatttgacaca-cttcagaatctctaactgggctgactggtgaaaggatttcccagtgcaaaaccagtctgtaaagacaaggagaagtggttattt---------------------tttt-caaatcctagaatcacaacacaaaattaaaaggcacacaaggaaacagggaaacatggcctaataaaaggaag----aaaataagtttccaaatatcaaccc-ttcaaaaatggaggtatataaattatctggcaaagTGACATATCCTGACAAattctccaggatagatcaaatgttaggtc--------acaaagcgagtcttaacaaaatt-----aagacaaagaaaat-----caagaacctgttttgaccaaaagtaggatgaagcaaaaattcaatagtagaaggaaaacg----gaaacatttacaaatatatggaaattaaacaacatactattgaacaaccaatgagtcaaagaagaaatcaaaaagaatattagaaaacaagctgac--aaaaaa--a---------------------------taa---aaaaa------cacaacatagcaaaac s panTro5.chr1 101795863 623 - 228573443 AGATAACCTATAGTACTACAGATAGATAACAAAGAGAGCAAGAGATTACATGCTCCTGA-AGAAAGACCTGCAAATTTTTCTAA----GAATTTACACACA-ATTCCAGAGACAATACATTCAcaga--a-agatttgacaca-cttcagaatctctaactggactgactggtgaaaggatttcccagtgcaaaaccagtctgtaaagatagggagaagtggttattt---------------------tttt-caaatcctagaatcgcaacacaaaattaaaaggcacacaaggaaacagggaaacatggcccaataaaaggaag----aaaataagtttccaaatatcaaccc-ttcaaaaatggaggtatataaattatctgccaaagTGATACATCCTGACacattctccaggatagatcacatgttaggtt--------acaaaacaagtcttaacaaattt-----aagagaaaggaaat-----caagaacctgttttgaccaaaagtaggatgaagcaaaacttcaatagtagaaggaaaact----gaaacatttacaaatatatggaaattaaacaacatactattgaacaaccaatgagtcaaagaagaaatcaaaaagaatataagaaaacaagctgac--aaaaaa--a---------------------------taa---aaaaa-------acaacatagcaaaac i panTro5.chr1 C 0 C 0 s panPan2.chr15 44373027 628 + 99763055 AGAGAACCTACAGTACTGCAGATAGATAACAAAGACGGCAAGAGATTACAAGCTCCTGA-AGAAAGACCTGCAAATTTTTCTAA----GAATTTACACACA-ATTCCAGAGACAAtacattcacaga--atagatttgacaca-cctcagaatctctaactgggctgacaggtgaaagaatttcccagtgcaaaaccagtctgtaaagacagggagaagtggttattt---------------------tttt-caaatcctagaatcgcaacacaaaattaaaaggcacacaaggaaacagggaaacatggcccaataaaaggaac----aaaataagtttccaaatatcaaccc-ttcaaaaatggaggtatataaattatctggcaaaGTGACATACCCTGACacattctccaggatagatcacatgttaggtc--------ataaaacaagtcttaacaaattt-----aagacaaaggaaat-----caagaatctgttttgaccaaaaataggatgaagcaaaaattcaatagtagaagtaaaact----gaaacatttacaaacatatggaaattaaacaacatactattgaacaaccaatgaatcaaagaagaaatcaaaaagaatgttacaaaacaagctgac--aaaaaa--a---------------------------aaacacacaca------cacaacatagcaaaac i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 4102 624 - 24701 AGATAACCTACAGTACTACAGATAGATAACAAAGAGAGCAAGAGATTACATGCTCCTGA-AGAAAGACCTGCAAATTTTTCTCA----GAATTTACACACA-ATTTCAGAGACAATACATTCAcaga--a-agatttgacaca-cttcagaatctctaactgggctgactggtgaaaggatttcccagtgcaaaaccagtctgtaaagacagggagaagtggttattt---------------------tttt-caaatcctagaatcacaacacaaaattaaaaggcacacaaggaaacagggaaacatggcctaataaaaggaag----aaaataagtttccaaatatcaaccc-ttcaaaaatggaggtatataaattatctggcaaagTGACATATCCTGACacattctccaggatagatcaaatgttaggtc--------acaaagcaagtcttaacaaattt-----aagacaaaggaaat-----caagaacctgttttgaccaaaagtaggatgaagcaaaaattcaatagtagaaagaaaacg----gaaacctttacaaatatatggaaattaaacaacatactattgaacaaccaatgagtcaaagaagaaatcaaaaagaatattagaaaacaagctgac--aaaaaa--a---------------------------taa---aaaaa------cacaacatagcaaaac i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67503596 629 - 121039945 AGAGAACCTACAGTACTACAGATAGATAACAAAGAGAGCGAGAGATTACAAGCTCCTGA-AGAAAGACCTGCAAATTTTTCTAA----GAATTTGCACACA-ATTCCAGAGACAAtacattcacaga--atagatttgacaca-cctcagaatctccaactaggctgactggtgaaagaatttcccagtgcaaaaccactctgtaaagacagggagaagtggttattt---------------------tttt-caaatcctagaatcgcaacacaaaattaaaaggcacacaaggaaacagggaaacatggcccaataaaaggaac----aaaataagtttccaaatatcaaccc-ttcaaaaatggaggtatataaattttctggcaaaGTGACATATCCTGACacattctccaggacagatcac--gttaggtc--------acaaaacaagtcttaacaaattt-----aagacaaaggaaat-----caagaagctgttttgaccaaatataggatgaagcaaaaattcaatagcagatggaaaact----gaaacatttacaaacatatggaaattaaacaacatactattgaacaaccaatgagtcaaagaagaaatcaacaagaatgttacaaaacaagctgac--aaaaaa--a---------------------------aaa---aaaaaaccacacacaacatagcaaaac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23412082 628 + 169600520 AGAGAACCTACAGTACTACAGATAGATACCAAAGAGAGCAAGAGATTACAAGCTCCTGA-AGAAAGTCCTGCAAATTTTTCTAA----GAATTTACACACA-ATTCCAGAGGCAAtacattcacaga--atagatttgacaca-cctcagaatctctaactgggctgactggtgaaggggtttcccag-----------tctgcaaagacagggagaagtggttgttt---------------------tttt-caaatcctagaattgcaacacaaaattaaaaggcacacaaggaaacagggaaacatggcccaataaaaggaactattaaaataagtttccgaaaatcaaccctttcaaaaatggaggtatataaattatctggcaaaGTGATATATCCTGACacattctccaggacagatcgcatgttaggtc--------acaaaataagtcttaacacattt-----aagacaaagtaaat-----caagaatctgttttgaccaaaaataggatgaagcaaaaattcaatagtagaaggaaaact----gaaacatttacaaatatatggagattaaacaacatactattgaacaatcaatgagtcaaagaagaaatcaaaaagaatgttagaaaacaagctgac--aaaaac--a------------------acacacacacac---acaca------cacaacatagcaaaac i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24016054 628 + 171882078 AGAGAACCTACAGTACTACAGATAGATACCAAAGAGAGCAAGAGATTACAAGCTCCTGA-AGAAAGTCCTGCAAATTTTTCTAA----GAATTTACACACA-ATTCCAGAGGCAAtacattcacaga--atagatttgacaca-cctcagaatctctaactgggctgactggtgaaggggtttcccag-----------tctgcaaagacagggagaagtggttattt---------------------tttt-caaatcctagaattgcaacacaaaattaaaaggcacacaaggaaacagggaaacatggcccaataaaaggaactattaaaataagtttccgaaaatcaaccctttcaaaaatggaggtatataaattatctggcaaaGTGATATATCCTGACacattctccaggacagatcgcatgttaggtc--------acaaaataagtcttaacacattt-----aagacaaagtaaat-----caagaatctgttttgaccaaaaataggatgaagcaaaaattcaatagtagaaggaaaact----gaaacatttacaaatatatggagattaaacaacatactattgaacaatcaatgagtcaaagaagaaatcaaaaagaatgttagaaaacaagctgac--aaaaac--a------------------acacacacacac---acaca------cacaacatagcaaaac i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13260869 638 - 40200012 AGAGTACCTACAGTACTACAGATAGATACCAAAGAGAGCAAGAGATTACAAGCTCCTGA-AGAAAGTCCTGCAAATTTTTCTAA----GAATTTACACACA-ATTCCAGAGGCAAtacattcacaga--atagatttgacaca-cctcagaatctctaactgggctgactggtgaaggggtttcccag-----------tctgcaaagacagggagaagtggttattt---------------------tttt-caaatcctagaattgcaacacaaaattaaaaggcacacaaggaaacagggaaacatggcccaataaaaggaactattaaaataagtttccgaaaatcaaccctttcaaaaatggaggtatataaattatctggcaaaGTGATATATCCTGACacattctccaggacagatcgcatgttaggtcttagttagacaaaataagtcttaacacattt-----aagacaaagtaaat-----caagaatctgttttgaccaaaaataggatgaagcaaaaattcaatagtagaaggaaaact----gaaacatttacaaatatatggaaattaaacaacatactattgaacaatcaatgagtcaaagaagaaatcaaaaagaatgttagaaaacaagctgacaaaaaaac--a------------------acacacacacac---acaca------cacaacatagcaaaac i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3248690 620 + 7633303 AGAGAACCTACAGTACTACAGATAGATACCAAAGAGAGCAAGAGATTACAAGCTCCTGA-AGAAAGTCCTGCAAATTTTTCTAA----GAGTTTACACACA-ATTCCAGAGGCAAtacattcacaga--atagatttgacaca-cctcagaatctctaactgggctgactggtgaaggggtttcccag-----------tctgcaaagccagggagaagtggttattt---------------------tttt-caaatcctagaattgcaacacaaaattaaaaggcacacaaggaaacagggaaacatggcccaataaaaggaactattaaaataagtttccaaaaatcaaccctttcaaaaatggaggtatataaattatctggcaaaGTGATATATCCTGACacattctccaggacagatcgcatgttaggtc--------acaaaacaagtcttaacacattt-----aagacaaagtaaat-----caagaatctgtttcgaccaaaaataggatgaagcaaaaattcaatagtagaaggaaaact----gaaacatttacaaatatatggaaattaaacaacatactattgaacaatcaatgagtcaaagaagaaatcaaaaagaatgttagaaaacaagctgac--aaaaac--a--------------------------acac---acaca------cacaacatagcaaaac i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21949858 648 - 58131712 AGAGAACCTACAGTACTACAGATAGATATCAAAGAGAGCAAGAGATTACAGGCTCCTGA-AGAAAGTCCTGCAAATTTTTCTAA----GAATTTACACACA-ATTCCAGAGACAATACATTCACAGAATATagatttgacaca-cctcagaatctctaactgggctgactggtgaaggggtttcccag-----------tctgcaaagacagggagaagtggttattt---------------------tttt-caaatcctagaattgcaacacaaaatgaaaaggcacacaaggaaacagggaaacatggcccaataaaaggaactattaaaataagtttccaaaaatcaaccctttcaaaaatggaggtatataaattacctggcaaagTGATATATCCTGACacattctccaggatagatcgcatgttaggtc--------acaaaacaagtcttaacaaactt-----aagacaaagtaaat-----caagaatctgtttccaccaaaaataggatgaagcaaaaattcaatagtagaaggaaaact----gaaacatttacaaatatatggaaattaaacaacatactattgaacgatcaatgagtcaaagaagaaatcaaaaagaatgttagaaaacaagctgac--aaaaac--aacacacacacacacacacacacacacacac---acaca------cacaccatagcaaaac i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 44744 632 + 2620224 AGAGAACCTACAGTACTACAGATAGATACCAAAGAGAGCAAGAGATTACAAGCTCCTGA-AGAAAGTCCTGCACATTTTTCTAA----GAATTTACACACA-ATTCCAGAGGCAAtacattcacaga--atagatttgacaca-cctcagaatctctaactgggctgactggtgaaggggtttcccgg-----------tctgcaaagccagggagaagtggttattt---------------------tttt-caaatcctagaattgcaacacaaaattaaaaggcacacaaggaaacagggaaacatggcccaataaaaggaactattaaaataaggttccaaaaatcaaccctttcaaaaatggaggtatataaattatctggcaaaGTGATATATCCTGACacattctccaggacagatcgcatgttaggtc--------acaaaacaagtcttaacacattt-----aagacaaagtaaat-----caagaatctgttttgaccaaaaataggatgaagcaaaaattcaatagtagaaggaaaact----gaaacatttacaaatatatggaaattaaacaacatactattgaacaatcaatgagtcaaagaagaaatcaaaaagaatgttagaaaacaagctgac--aaaaac--a--------------acacacacacacacac---acaca------cacaacatagcaaaac i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24184925 622 + 132174527 AGAGAACCTGTAGTACTACAGAGAAGTACCAAAGACAGCAAGAGATTACAAGCTCCTAA-AGAAAGACCTGCAAATTTTTCTAA----GACTTTACACACA-ATTCCAGAGATgacacattcacaaa--atagatttgacaca-cctcagaatctctaacagggctgactggtgaaaggatgtccaggtgcaaaaccagtctgtaaagacagggagaggtggttgttt--------------tttttgttttt-caaatcctagaatcccaacgcaaaattaaagggcacacagagaaacagggaaacatggcccaataaaagaaac----attataagtttccaaaaatcaaccgtttcaaaaatggaggtatagaaattatctgtcaaaGTGACATATCCTGAATcgttctccaggaaagatcac--gttagata--------acaaaacaagtcttaaaaaattt------agac-atagaaat-----gaagaa--tgttttgatcaaaaataggataaagcacaaattaaatagtaaaaggaaaatg----aaaacatttacaaacatgtgaaaataaaacaacatactattgaacaaccaatgggtcaaagaagaaatcaaaaagaatgttagaaaacatgctgag--aaaaaa--a--------------------------a------aaaaa---------aacacagcaaaac i calJac3.chr10 I 126 C 0 s saiBol1.JH378136 10580452 643 - 21366645 AGAGAACCTGCAGTACTGCAGAGAAGTACCAAAGACAGCAAGAGATTACAAGCTCCTAA-AGAAAGACCTGCAATATTTTCTAA----GACTTTACACACA-ATTCCAGAGATGATACATTcacaaa--atagatttgacaca-cctcagaatttctaacagggctgactggtgaaaggatgtccaggtgcaaaaccagtctctaaaaacagggagaggtggtttttttgtttttgtttttgtttttgtttttccaaatcctagaatcccaacacaaaattaaaaggcacacaaggaaacagggaaacatagcccaataaaagaaac----a-tataagtttccaaaaatcaacgctttcaaaaatggaggtatagaaattatccggtaaagCGACATATCCTGAATcattctccaggaaagatcat--gttaggta--------acaaaacaagtcttagcaaattt-----aagacaatagaaat-----caagaatctgttttgatcaaaaataggataaagcacaaattaaatagtaaaaggaaaact----gaaacatttacaaacatgtgaaaattaaacaacatactattgaacaaccaatggttcaaagaagaaatcaaaatgattgttagaaaacatgctgag--gaaaaa--a--------------------------acac---acaca---------cacacagcaaaac i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3731200 619 - 13033340 AGAGAACCTGCAGTACTGCAGAGAAGCACCAAAGACAGCAAGAGATTACAAGCTCCTAA-AGAAAGACCTGCAATTTTTTCTAA----GACTTTACACACA-ATTCCAGAGATGATAAATTcacaaa--atagatttgacaca-cctcagaatctctaacagggctgactggtgaaaggatatccaggtgcaaaaccagtctctaaagacagggagatgtgg--gttt--------------ttttttttttt-caaatcctagaaacccaacacaaaattaaaaggcacacaaggaaacagggaaacatggcccagtaaaagaaac----attataagtttccaaaaatcaaccctttcaaaaacggaggtatagaaattatctggcaaagTGACATATCCTGAATcactctccaggaaagatcac--attagata--------acaaaacaagtcttaacaaattt-----aagacaacagaaat-----caagaatctgttttaatt----------taatttacaaattaaatagtaaaaggaaaact----gaaacatttacaaacatgtgaaaattaaacagcatactattgaacaaccaatgggtcaaggaagaaatcaaaaagaatgttagaaaacatgctgag--aaaaaaaca--------------------------aaaa---anaaa---------aaaacaaaaaaaa i cebCap1.NW_016107324v1 C 0 I 35 s aotNan1.NW_018501505v1 5223388 625 + 11604778 AGAGAACCTGCAGTACTACAGAGAAGTACCAAAGACAGCAAGAGATTACAAGCTCCTAA-AGAAAGACCTGCAAATTTTTCTGA----GACTTTACACACA-ATTCCAGAGATGATACATTcacaaa--atagatttgacaca-cctcagaatctctaacagggctgactggtgaaaggatgtccaggtgcaaaaccagtctgtaaagacagggagaggtggttgttttat-----------ttttttttttt-ctaatcctagaatcccaacacaaaactaaaaggcacacaaggaaacagggaaacatggcccaataaaagaaac----attaaaagtttccaaaaatcaaccctttcaaaaatggaggtatagaaattatctggcaaagTGACATATCCTGAATcattctccaggagagatcac--gttaggta--------acaaaacaagtcttaacaaattt-----aagacaatagaaat-----caagaatctgttttgatcaaaaataggataaagcacaaattaaatagtaaaaggaaagct----gaaacatttacaaac--gtgaaaattaaacaacatactattgaacaaccaatgggtcaaagaagaaatcaaaaagaatgttagaaaacatgctgag--aaaaaa------------------------------------aaaaa---------aaaacagaaaaac i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13413585 601 + 40214260 GGATAACTTGCACTATTGCAAACAGACACCAGAGGGTGCAAGAGATTATGAGCTCCTGACAAAAGGAACTGGTAAATCCCTTAATCTGGAATTAAAATGCATAAACCAAAGAAATTGTATCCAcaga--a-atgtttgagagatcctaagaatgtctagc----caaaatggtaaagacctttccctggacaaagccaatctgtaaagactgggaaaagtagcagttt----------------------ttt-caaatgttttgttcccaaaacaaagatataaagaatttgaagaaacagagaaacacaccccaacaaaaggat-----gaaataaatctccagaaaccaaccc-taaagaaatttaggtgtaagaattatctaacaaagaa------------------ttcaaaatgactggc--ataaaggt--------gctgagtgaactcagggaaacatgcatgaagaaaatgaaaatatcaacaaaaaggtat--------aaaatataaaaaaaaaaacatttaa-agttgaagaaaatccactagaaagattca-----atatcagatttgatcaa-ata-gaagaaagaatcaatgaactcaaatacagaccatttgaaatgatatagtcagaggagca--aaaaga--a---------------------------------acaga-----gtgcaaaagagtaaaga i canFam3.chr30 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=67493.000000 s hg38.chrUn_KI270749v1 13926 8 + 158759 ttagaaat s panTro5.chr1 101796486 8 - 228573443 ttagaaat i panTro5.chr1 C 0 C 0 s panPan2.chr15 44373655 8 + 99763055 ttagaaat i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 4726 8 - 24701 ttagaaat i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67504225 8 - 121039945 ttagaaat i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23412710 8 + 169600520 ttagaaat i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24016682 8 + 171882078 ttagaaat i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13261507 8 - 40200012 ttagaaat i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3249310 8 + 7633303 ttagaaat i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21950506 8 - 58131712 ttagaaat i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 45376 8 + 2620224 ttagaaat i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24185547 8 + 132174527 ttaggaat i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10581095 8 - 21366645 ttaggaat i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 5224013 8 + 11604778 ttaggaat i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13414186 8 + 40214260 gtagggat i canFam3.chr30 C 0 I 3028 e otoGar3.GL873530 132194 0 + 36342412 C e cebCap1.NW_016107324v1 3731819 35 - 13033340 I e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=299009.000000 s hg38.chrUn_KI270749v1 13934 41 + 158759 gcagcaaaggcagtactaaagagggaaatttatagcaataa s panTro5.chr1 101796494 41 - 228573443 gcagcaaagacagtactaaagagggaaatttatagcaataa i panTro5.chr1 C 0 C 0 s panPan2.chr15 44373663 41 + 99763055 gcagcaaaggcagtactaaagagggaaatttatcgcaataa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 4734 41 - 24701 gcagcaaaggcagtactaaagagggaaatttatagcaataa i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67504233 41 - 121039945 gcagcaaaggcagtactaaagagggaaatttatagcaataa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23412718 40 + 169600520 gcagcaaaggcagtact-aagagggaaatttatagcaatag i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24016690 40 + 171882078 gcagcaaaggcagtact-aagagggaaatttatagcaatag i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13261515 40 - 40200012 gcagcaaaggcagtact-aagagggaaatttatagcaatag i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3249318 40 + 7633303 gcagcaaaggcagtact-aagagggaaatttatagcaataa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21950514 40 - 58131712 gcagcaaaggcagtact-aagagggaaatttatagcaataa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 45384 40 + 2620224 gcagcaaaggcagtact-aagagggaaatttatagcaataa i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24185555 40 + 132174527 gcagcaaaggcagtact-aagagggaagtttataacaataa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10581103 40 - 21366645 gtagcaaaggcagtact-aatggggaggtttataacaataa i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 5224021 40 + 11604778 acagcaaaggcagtact-aagagggaagtttataacaataa i aotNan1.NW_018501505v1 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e cebCap1.NW_016107324v1 3731819 35 - 13033340 I e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=4983708.000000 s hg38.chrUn_KI270749v1 13975 630 + 158759 atgcctaccttaaaaaagaagaaagatctcaaataaacaacctaactttacaactcaaggaact---aaaaaa------aagaaccaagcccaaacccagcaaaaggaaggaaataataaagattaag-caaataaaggatattttcacacacatattttcattataaccagaaag---aaccaatgcaagtgaatagatt----aaaaaaaaa-actgtggtattactatacaatggaatatggcaattaaaaagagaaaagactcaaccaaataaaattaaaaatgaaaaagtagacattgtaattgatgccacagaaataaaa-aagattattagagactgctgtgaatgattatggtaataattggataacctagaaaaaaatc--aaattactagaaatatacaacaaacaacactgaatcaaaaagaaatacaaaatatgaacaaatctatagctagtaaggtgtttaaattagtactcaaaaatcttccaagaaag-aaaatctcaggtgcagatgactttactagagaattctgccaacatttaaggaagaattaatgccaatatttctcaaacattcctaaaaagttaaagaagaaagaactattctaaactctttttgtgaagctagtataaccctaatatc s panTro5.chr1 101796535 633 - 228573443 atgcttaccttaaaaaagaagaaagatctcaaataaacaacctaactttacaactcaaggaact---aagaaa-----gaagaactaagcccaaatccagcaaaaggaaggaaataataaagattaattcaaataaaggatattttcacacacatattttcattataaccagaaagtagaaccaatgcaagtgaatagatt----ttaaaaag----tgtcgtattactatacaatggaatatggcaattaaaaagagaaaagactcaaccaaataaaattaaaaatgaaaaagtagatattgcaattgatgccacagaaataaaagaagattataagagactgctgtgaatgattatggtagtaattgggtaacctagaaaaaaatc--aaattactggaaatatacaacccacaacactgaaccaagaagaaatacaaaatatgaacaaatctgtagccaataaggtgtttaaattagtaatcaaaaatcttccagcaaag-aatatctcaggtgcaggtgactttactagagatttctgccaacatttaaggaagaattaatgccaatatttctcaaacattcctaaaaaattaaagaagaaagaacaattctaaactctttttgagaagctagcataaccctaatatc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44373704 634 + 99763055 atgcctaccttaaaaaagaagaaagatctcaaataaacaacctaactttacaactcaaggaact---aaaaaaa----gtagaactaagcccaaacccagcaaaaggaaggaaataataaagattaatgcaaataaaggatattttcacacacatattttcattataaccagaaagtggaaccaatgcaagtgaatagatt----aaaaaaaa---ctgtggtattactatacaatggaatatggcaattaaaaagagaaaagactcaaccaaataaaattaaaaatgaaaaagtagacattgcaattgatgccacaaaaataaaa-aagattataagagactgctgcaaatgattatgatagtaattggataacctagaaaaacatc--aaattactggaaatatacaacttacaacactgaatcaagaagaaatacaaaatatgaacaaatctatagctagtaaggtgtttaaatcagtaatcaaaaatctttcagcaaag-aaaatctcaggtgcagatgactttactagagaattctgccaacatttaaggaagaattaatgccaatatttctcaaacattcataaaaaattaaagaagaaagaacaattctaaactctttctgtgaagctagcataaccctaatagc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 4775 634 - 24701 atgcctaccttaaaaaagaagaaagatctcaaataaacaacctaactttacaactcaaggaact---aaaaaa-----gaagaactaagcccaaacccagcaaaaggaaggaaataataaagattaatgcaaataaaggatattttcacacacatattttcattataaccagaaagtagaaccaaagcaagtgaatagatt----aaaaaaaa---ctgtggtattactatacaatggaatatggcaattaaaaagagaaaagactcaaccaaataaaattaaaaatgaaaaagtagacattgcaattgatgccacagaaataagaaaagattataagagactgctgtgaatgattatggtagtaattggataacctagaaaaaaatc--aaattactggaaatatacaacaaacaacactgaatcaagaagaaatacaaaatatgaacaaatctatagctagtaaggtgtttaaattagtaatcagaaatcttccaacaaag-aaaatctcaggcacagatgactttactagagaattctgccaacatttaaggaagaattaatgccaatatttctcaaacattcctaaaaagttaaagaagaaagaacaattctaaactctttttgtgaagctagtataacactaatatc i gorGor5.CYUI01005671v1 C 0 I 250 s nomLeu3.chr6 67504274 631 - 121039945 atgcctaccttaaaaaagaagaaacatctcaaataaacaatctaactttacaac-caaggaact---aaaaaa-------agaactaagccgaaacccagcaaaaggaagaaaataataaagattaatgcaaataaaggatgttttcacacacatattttcattataaccagaaagtagaaccaaggcaagtgaataggtt----aaaaaaaaa-actgtggtattactatacaatggaatatggcaattaaaaagagaaaagactcagccaaataaaattaaaaatgaaaaagtagacattgcaattgattccacaaaaataaaa-aagattataagagactgctgtgaatgattatggtagtaattggataacctagaaaaacatc--aaattactggaaatatacatcctacaacactgaatcaagaagaaatacaaaatatgaacaaatctatagctagtaaggtgtttaaatt-gtaatcaaaaatctttcagcaaag-aaaatctcaggtgcagatgactttactagagaattctgccaacatttaaggaagaattaatgccaatatttctcaaacattcataaaaaattaaagaagaaggaacaattctaaactctttttgtgaagctagcataaccctaatatc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23412758 628 + 169600520 atgcctaccttaaaacagaagaaagatctc----aaaccacctgactttacaactcaaggaact--aaaaaaa------aagaactaagcccaaacccagcaaaaggaaggaaataataaagattcatgcaaataaaggatcttttcacacagatattttcattataaccagaaagtggaaccaatccaagtgaatagatt----aaaaaaaaaaac--tggtattactatacagtggaatatggcaattaaaaagagaaaagactcagtc-----aaattaaaactgaaaaagtagacattgcgattgatgccacagaaacaaaa-aagactgtaagagactgctgtgaatgattatagtagtaattgggtaacctagaaacaaatcagagattactggaaatatacaacctataacactgaatcaagaagaaatacaaaatatgaacaaatctctagctagtaaggtgtttaaatcagtaatcaaaaatcttccagcaaagaaaaatctcaggtgtagatgactttgctagagaattctgccaacatttaaggaagaattaatgccaatatttctcaaacattcctaaaaaactaaagaagaaagaacaattctaaactctttttgtgaatctagcataaccctaatatc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24016730 630 + 171882078 atgcctaccttaaaacagaagaaagatctc----aaaccacctgactttacaactcaaggaact--aaaaaaa------aagaactaagcccaaacccagcaaaaggaaggaaataataaagattcatgcaaataaaggatcttttcacacagatattttcattataaccagaaagtggaaccaatccaagtgaatagatt----aaaaaaaaaaactgtggtattactatacagtggaatatggcaattaaaaagagaaaagactcagtc-----aaattaaaactgaaaaagtagacattgcgattgatgccacagaaacaaaa-aagactgtaagagactgctgtgaatgattatagtagtaattgggtaacctagaaacaaatcagagattactggaaatatacaacctataacactgaatcaagaagaaatacaaaatatgaacaaatctctagctagtaaggtgtttaaatcagtaatcaaaaatcttccagcaaagaaaaatctcaggtgtagatgactttgctagagaattctgccaacatttaaggaagaattaatgccaatatttctcaaacattcctaaaaaactaaagaagaaagaacaattctaaactctttttgtgaatctagcataaccctaatatc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13261555 635 - 40200012 atgcctaccttaaaacagaagaaagatctc----aaaccacctgactttacaactcaaggaactaaaaaaaaa------aagaactaagcccaaacccagcaaaaggaaggaaataataaagattcatgcaaataaaggatcttttcacacagatattttcattataaccagaaagtggaaccaatccaagtgaatagatt-aaaaaaaaaaaaaactgtggtattactatacagtggaatatggcaattaaaaagagaaaagactcagtc-----aaattaaaactgaaaaagtagacattgcgattggtgccacagaaacaaaa-aagactgtaagagactgctgtgaatgattatagtagtaattgggtaacctagaaacaaatcagagattactggaaatatacaacctataacactgaatcaagaagaaatacaaaatatgaacaaatctctagctagtaaggtgtttaaatcagtaatcaaaaatcttccagcaaagaaaaatctcaggtgtagatgactttgctagagaattctgccaacatttaaggaagaattaatgccaatatttctcaaacattcctaaaaaactaaagaagaaagaacaattctaaactctttttgtgaatctagcataaccctaatatc i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3249358 628 + 7633303 atgcctaccttaaaacagaagaaagatctc----aaaccacctgactttacaactcaaggaact---aaaaaa------aagaactaagcccaaacccagcaaaaggaaggaaataataaagattcatgcaaataaaggatcttttcacacagatattttcattataaccagaaagtggaaccaatccaagtgaatagatt---aaaaaaaaaagactgtggtgttactatacagtggaatatggcaattaaaaagagaaaagactcagtc-----aaattaaaactgaaaaagtagacattgcgattgatgccacagaaac--aa-aagactgtaagagactgctgtgaatgattatagtagtaattgggtaacctagaaacaaatcagagattactggaaatatacaacctataacactgaatcaagaagaaatacaaaatatgaacaaatctctagctagtaaggtgtttaaatcagtaatcaaaaatcttccagcaaagaaaaatctcaggtgcagatgactttgctagagaattctaccaacatttaaggaagaattaatgccaatatttctcaaacattcctaaaaaactaaagaagaaagaacaattctaaactctttttgtgaatctagcataaccctaatatc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21950554 629 - 58131712 atgcctaccttaaaacagaagaaagatctc----aaaccacctgactttacaactcaaggaact---aaaaaa------aagaactaagcccaaacccagcaaaaggaaggaaataataaagattcatgcaaataaaggatcttttcacacagatattttcattataaccagtaagtggaaccaatccaagtgaatagatt----aaaaaaaaaaactgtggtattactatacaatggaatatggcaattaaaaagagaaaagactgagtc-----aaattaaaactgaaaaagtagacattgcgattgatgccacagaaataaac-aagactgtaagagactgctgtgaatgattatagtagtaactgggtaacctagaaacaaatcagagattactggaaatacacaacctataacaccgaatcaagaagaaatacaaaatatgaacaaatctctagctagtaaggtgtttaaatcagtaatcaaaaatcttcctgcaaagaaaaatctcaggcgcagatgactttgctagagaattctgctaacatttaaggaagaattaatgccaatatttctcagacattcctaaaaaactaaagaagaaagaacaattctaaactctttttgtgaatctagcgtaaccccaatatc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 45424 632 + 2620224 atgcctaccttaaaacagaagaaagatctc----aaaccacctgactttacaactcaaggaact---aaaaaa------aagaactaagcccaaacccagcaaaaggaaggaaataataaagattcatgcaaataaaggatctttt-acacacatattttcattataaccagaaagtggaaccaatccaagtgaatagattaaaaaaaaaaaaaaactgtggtattactatacagtggaatatggcaattaagaagagaaaagactcagtc-----aaattaaaactgaaaaagtagacattgcgattgatgccacagaaacaaaa-aagactgtaagagactgctgtgaatgattatagtagtaattgggtaacctagaaacaaatcagagattactggaaatatacaacctataacactgaatcaagaagaaatacaaaatatgaacaaatctctagctagtaaggtgtttaaatcagtaatcaaaaatcttccagcaaagaaaaatctcaggtgcagatgactttgctagagaattctaccaacatttaaggaagaattaatgccaatatttctcaaacattcctaaaaaactaaagaagaaagaacaattctaaactctttttgtgaatctagcataaccctaatatc i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24185595 632 + 132174527 atgcctacgttaaaaaagaataaagatctccaatatacaacctaacttttcaactcaaggaact---agaaaaataagaacaaactaagcccaaacccagcaaaaggaaggaaataataaagatgaatgcaaataaggcatatttttacacacatattttcataataactagaaagtagaagcaatccaagtgaacagata----aacaaa-----ctgtggtattactatacaatggaatatggcaat--aaaagagaaaagattaaaccaagtaaaattaaaaatgaaaaaggagacattacaattgatgccacagaaata----aagattacaagagactgctatgaacaatgatgatagtaattggataacttagaaaaaaatcagaaattactggaaatatacaacctacaacactgactcaagaaaaaatacaaaatacaaacaaatctataactagtaaggtgtttaaatcagtaatcaaatatcttccagcaaag-aaaatctcaggtgcagatgactttactagagaattctgccagcatttaaggaagaattaatgccaatatttctcaaatgctcctaaaaa-ttaaagaagaaagaacaattttaaactccttttgtgaagctagcataatgccaatgtc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10581143 631 - 21366645 atgcctacattaaaaaacaagaaagatctccaataaacaacctaacttttcaactcaagaaact---agaaaaataagaaaaaactaag-ccaaacccagcaaaaggaaggaaataataaagatgaatgcaaatagggcatatttttacacacgtattttcctaataaccagaaagtagaagcaatccaagtgaacagata----aacaaa-----ctgtggtattactatacaatggaatatggcaat--aaaagagaaaagattcaaccaagtaaaattaaaaatgaaaaaggagacattaaaattgaagccacagaaata----aagattacaagagactgctatgaacaatgatgatagtacctggataacctagaaaaaaatcataaattactggaaatatacaacctacaatactgactcaagaaaatatacaaaatatgaacaaatctgtaactagtaagatgtttaaatcagtaatcaaaaatcttccagcaaag-aaaatctcaggtgcagatgactttcctagataattctgccaacatttaaggaagaattaatgccaatatttctcaaatgctcctaaaaa-ttaaagaggaaagaataattttaaactccttttgtgaagctagcataatcctaatgtc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3731854 628 - 13033340 atgcctacattaaaaaagaagaaagatctccaataaacaacctaacttttcaactcaaggaact---agaaaaataagaacaaactaagcccaaacccagcaaaaggaaggaaataataaagatgaatgcaaataaggcacatttttacacacatattttcataataaccagaaagtagaagcaatccaagtgaacagata----aacaaa-----ctgtggtattactatacaatggaatatggcaat--aaaagagaaaagattcaactaagtaaaattaaaaatgaaaaaggagacattacaattgatgccacagaaata----aagattacaagagactgttatgaacaattatgatagtaattggataacctag-aaaaaatcagaaattactggaaatacacaacctacaatactgactcaagaaaaaatacaaaatatgaacaaatctataactagtaagatgtttaaatcagtaatcaaaaatcttccagcaaag-aaaa--tcaggtgaagatgactttcccagagaattctgccaacatttaaggaggaattaatgccaatatttctcaaatactcctaaaaa-ttaaagagg-aagaacaattttaaactccttttgtgaagctagcataaccctgatgtc i cebCap1.NW_016107324v1 I 35 C 0 s aotNan1.NW_018501505v1 5224061 629 + 11604778 atgcctacattaaaaaagaagaaagatctccaataaacgacctaacttttcaatgcaaggaact---agaaaaataagaacaaactaagcccaaacccagcaaaaggaaggaaataataaagaggaatgcaaataagtcatatttttacacacatattttcataataaccagaaaatagaagcaatccaagtgaacagata----aacaaa-----ctgtggtattactatacaatggaatatggcaat--aaaagagaacagattcaaccaagtaaaattaaaaatgaaaaaggagacattacaattgatgccacagaaat------agattacaagagactgctatgaacaatgatgatagtaattggataacctag-aaaaaatcagaaattactgtaaatatacaacctacaacactgactcaagaaaaaatacaaaatatgaacaaatctataactagtaaggtgtttacatcagtaattaaaaatcttctagcaaag-aaaatctcaggtgcagatgactttactagagaattctgccaacatttaaggaagaattaatgccaatatttctcaaatgctcctagaaa-ttaaagaggaaagaacaattttaaattccttttgtggagctagcataaccctaatgtc i aotNan1.NW_018501505v1 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=2918862.000000 s hg38.chrUn_KI270749v1 14605 388 + 158759 aaagccagacaatggtgctacaag--aaaaaaaaatta-----aatattcctaatgaatgtagatgc-aaaatcctcaacaaataccagtaaattgaattcaacagcactataaagtatcatccaccataattatgatggatt-tgttcctggaatgcaagaagggttcaacatgtgcaa----atcaatataatatgccacattaacaaaata----attcaaataacgtgttcatctccgtagatggagaaagatcatttgatgaaattcaacattctctcattagaaaaacacttgaaaaaataggaatagaaa-gaaattattccaacagaataaaggccatatgtaaaaa-cccacatttcacaccatattaatgaag-aaaaactgaaatctcttcttctaa s panTro5.chr1 101797168 388 - 228573443 aaagccagacaatggcgctataag--aaaaaaaaat-a-----aatattcctaatgaatgtagatgc-aaaatcctcaacaaataccagcaaattgaattcaacagcagtataaagtatcatccaccataattatgatggattcttttcctggaatgcaagaacggttcaacatgtgaaa----atcaatataatatgccacattaacaaaaca----attaaaataacgtgttcatctctgtagatggagaaagagcatttgacgaaattcaacattctctcgttagaaaaacacttgaaaaaataggaatagagg-gaaattattccaacagaataaaggccatatgtaaaaa-cccacagctcacatcatgttaatgaag-aaaaattgaaaacccttcttctaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 44374338 386 + 99763055 aaaaccagacaatggcactacaag----aaaaaaatta-----aatattcctaatgaatgtagatgc-aaaatcctcaacaaatatcagcaaattgaattcaacagcactttaaagtatcatccaccataattatgatggatt-tattcctggaatgcaagaagggttcaacatgtgaaa----atcaatataatatgccacattaacaaaaca----attaaaatcacatgttcatctccgtagatggagaaagagcatttgatgaaattcaacattctttccttagaaaaacacttgaaaaactaggaatagaag-gaaattattcctacagaataaaggccacatgtaaaaa-cccacagctcacatcacattaatgaag-aaaaactgaaatctctttttctaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 5659 386 - 24701 aaagccagacaatgatgctacaat----aaaaaaatta-----aatattcctaatgaatgtagatgc-aaaatcctcaacaaataccagtaaattgaattcaacagcactataaagtatcatccaccataattatgatggatt-tgttcctggaatgcaagaagggttcaacatgtgcaa----atcaatataatatggaacattaacaaaaca----attcaaataacgtgttcatctccgtagatggagaaagagcatttgatgaaattcaacattctctcgttagaaaaacacttgaaaaaataggaatagaaa-gaaattattccaacagaataaaggccatatgtaaaaa-cccacagttcacaccatattaatgaag-aaaaactgaaatctcttcttctaa i gorGor5.CYUI01005671v1 I 250 C 0 s nomLeu3.chr6 67504905 387 - 121039945 aaaaccagacaatggcactacaag---aaaaaaaatta-----aatattcctaatgaatgtagatgc-aaaatcctcaacaaatatcagcaaattgaattcaacagcactttaaagtatcatccaccataattacgatggatt-tattcctggaatgcaagaagggttcaacatgtgaaa----atcaatataatatgccacattaacaaaaca----attaaaatcacatgttcatctccgtagatggagaaagagcatttggtgaaattcaacattctttccttagaaaaacacttgaaaaaataggaatagaag-gaaattattcctacagaataaaggccatatgtaaaaa-cccaaagctcacatcatatgaatgaag-aaaaactgaaatctcttcttctaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23413386 383 + 169600520 aaagccagacaatggcactacaag-aaaaaaaaaatta-----aatattcctaatgaacgtagatgc-aaaatccacaacaaataccagcaaattgaattcaacagcactttaaagtatcatccaccataattatgatggatt-tattc--------taagaagagtt---cgtgtgaaa----atcaatataataaaccacattaacaaaacaaatgattaaaatcacatgttcatctccgtagatggaaaaagagcatttgacgaaattcaacattctttcatgagaaaaacacttgaaaaaacaggaatagaag-gaaattattccaacagaataaaggccatatgtaaaaagcccgcagctcacgtaatattaatgaag-aaaaactgaaatatcttcttctaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24017360 383 + 171882078 aaagccagacaatggcactacaag-aaaaaaaaaatta-----aatattcctaatgaacgtagatgc-aaaatccacaacaaataccagcaaattgaattcaacagcactttaaagtatcatccaccataattatgatggatt-tattc--------taagaagagtt---cgtgtgaaa----atcaatataataaaccacattaacaaaacaaatgattaaaatcacatgttcatctccgtagatggaaaaagagcatttgacgaaattcaacattctttcatgagaaaaacacttgaaaaaacaggaatagaag-gaaattattccaacagaataaaggccatatgtaaaaagcccgcagctcacgtaatattaatgaag-aaaaactgaaatatcttcttctaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13262190 384 - 40200012 aaagccagacaatggcactacaagaaaaaaaaaaatta-----aatattcctaatgaacgtagatgc-aaaatccacaacaaataccagcaaattgaattcaacagcactttaaagtatcatccaccataattatgatggatt-tattc--------taagaagagtt---cgtgtgaaa----atcaatataataaaccacattaacaaaacaaataattaaaatcacatgttcatctccgtagatggaaaaagagcatttgacgaaattcaacattctttcatgagaaaaacacttgaaaaaacaggaatagaag-gaaattattccaacagaataaaggccatatgtaaaaagcccgcagctcacgtaatattaatgaag-aaaaactgaaatatcttcttctaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3249986 382 + 7633303 aaagccagacaatggcactacaag-aaaaaagaaatta-----aatattcctaatgaacgtagatgc-aaaatccacaacaaataccagcaaattgaattcaacagcactttaaagtatcatccaccataattatgatggatt-tattc--------taagaagagtt---cgtgtgaaa----atcaatataacaaaccacattaacaaaacaaataatt-aaatcacatgttcatctccgtagatggaaaaagagcatttgacgaaattcaacattctttcatgagaaaaacacttgaaaaaacaggaatagaag-gaaattattccaacagaataaaggccatatgtaaaaagcccgcagctcacataatattaatgaag-aaaaactgaaatatcttcttctaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21951183 384 - 58131712 aaagccagacaatggcactacaagaaaaaaaaaaatta-----aatattcctaatgaatgtagatgc-aagatccacaacaaataccagcaaattgaattcaacagcactttaaagtatcatccgctataattatgatggatt-tagtc--------caagaagggtt---catgtgaaa----atcaatataataaaccacattaacaaaacaaataattaaaatcacatgttcacctccatagatggagaaagagtatttgaggaaattcaacattctttcatgagaaaaacacttgaaaaaacaggaatagaag-gaaattattccaacagaataaagggcatatgtaaaaagcccacagctcacgtaatattaatgaag-aaaaactgaaatatcttcttctaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 46056 382 + 2620224 aaagccagacaatggcactacaag-aaaaaaaaaatta-----aatattcctaatgaacgtagatgc-aaaatccacaacaaataccagcaaattgaattcaacagccctttaaagtatcatccaccataattatgatggatt-tattc--------taagaagagtt---cgtgtgaaa----atcaatataacaaaccacattaacaaaacaaataatt-aaatcacatgttcatctccgtagatggaaaaagagcatttgacgaaattcaacattctttcatgagaaaaacacttgaaaaaacaggaatagaag-gaaattattccaacagaataaaggccatatgtaaaaagcccgcagctcacataatattaatgaag-aaaaactgaaatattttcttctaa i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24186227 399 + 132174527 aaagccatacagtggcactacaag----aaaaaatttacaatgaatattcctaattaa-gtagatgcaaaaatcctcagcaaataccagcaaattgatttcaacagcactttaaaatatcatccaccataatcatgaagaatt-tattcctggaatgcaagaagggtacaacatgtgaaaatccatcaatatgatataccacattaaaaaaacaaataattaaaatcacttgttcatctccatagctggagaaaaagcatttgaccaaattcaacattctttcatgataaaaacaactgaaaaaataggaatagaaataaaattattccaacagaataaaggacatatataaaaagcccacagctcacatcac---agtgaagaaaaaactgaaatctcttcttctaa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10581774 397 - 21366645 aaagccatacagttgcactatgag-----aaaaatttacaacgaatattcctaatgaatgtagatgcaaaaatcctcaacaaataccaggaaattgaattcaatagcactttaaaatatcacccaccataatcatgaagaact-tattcctggaatgcaagaagggttcaacatgtgaaaattcatcaatatgatatactacatt-aaaaatcaaataattaaaatcacatattcatctccatagctagagaaaaagcatttgactaaattcaacattctttcatgataaaaacaactgagaaaatagaaatagaaataaaattattccaacagaataaaggacatatataaaaagcccacagctcacatcgc---aatgaag-aaaacctgaaatctcttcttctaa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3732482 400 - 13033340 aaagccatacagtggcactatgag---aaaaaaatttacaatgaatattcttaatgaatttagatgcaaaaatcctcaagaaataccagcaaattgaattcaacagcactttaaaatatcatccaccataatcatgaagaatt-tattcctggaatgcaagaagggttcaacatgtgaaaatccatcaatatgatacactacattaaaaaaacaagtaattaaaatcacatgttcatctccatagctgaagaaaaagcatttgaccaaattcaacattctttcataataaaaacaactgaaaaaataggaatagaaataaaattattccaacagaataaaggacatatataaaaagcccacagctcacatcgc---aatgaaa-aaaacctgaaatctctttttctaa i cebCap1.NW_016107324v1 C 0 I 24 s aotNan1.NW_018501505v1 5224690 400 + 11604778 aaagccacacagcggcactacaag---aaaaaaatttacaatgaatattcctaatgaatgtagattcaaaaatcctcaacaaataccagcaaattgaattcaacggcacttaaaaatatcatccaccataatcatgaagaatt-tattcctggaatgcaagaagggttcaacatgtgaaaatccatcaatatgatataacacattaaaaaaacaaatagtttaaatcacatgttcatctccatagctggagagaaagcatttgaccaaattcaacattctttcatgataaaaacaactgaaaaaataggaatagaaataaaattattccaacagaataaaggacatatataaaaaacccacagctcacatcac---aatgaag-aaaaacagaaatctcttcttctaa i aotNan1.NW_018501505v1 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=157025.000000 s hg38.chrUn_KI270749v1 14993 31 + 158759 gatcaggatcaggaacaaggcaaggacacct s panTro5.chr1 101797556 31 - 228573443 gatcaggatcaggaacaaagcaaggatgcct i panTro5.chr1 C 0 C 0 s panPan2.chr15 44374724 31 + 99763055 gatcaggatcaggaacaaggcaaggatgcct i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 6045 31 - 24701 gatcaggatcaggaacaaggcaaggacgcct i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67505292 31 - 121039945 gatcagcatcaggaacaaggcaaggatgcct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23413769 29 + 169600520 gat--ggatcaggaacaaggcaaggatgcct i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24017743 29 + 171882078 gat--ggatcaggaacaaggcaaggatgcct i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13262574 29 - 40200012 gat--ggatcaggaacaaggcaaggatgcct i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3250368 29 + 7633303 gat--ggatcagaaacaaggcaaggatgcct i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21951567 29 - 58131712 gat--ggatcaggaacaaggcaaggatgcct i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 46438 29 + 2620224 gat--ggatcagaaacaaggcaaggatgcct i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24186626 24 + 132174527 ------gatgaggaataaagttagggtgcc- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10582171 24 - 21366645 ------gatgaggaataaagaaagggtgcc- i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 5225090 24 + 11604778 ------gatgaggaataaagtaagggtgcc- i aotNan1.NW_018501505v1 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e cebCap1.NW_016107324v1 3732882 24 - 13033340 I e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=1676510.000000 s hg38.chrUn_KI270749v1 15024 214 + 158759 ttatgaagtacataaagtcctagataaaataattcagcaagaaaaagatataaa-ggcatccaaattggaaagggagaagtaagtaaaattttttctattcccagaaaacatcatcttatatat-----taaaaaaaccctaaagattcaacaaaaag-ctcttagaactaataaaattaattcagcaaagttgcaggattcaaagtaaagattcaaaaaa s panTro5.chr1 101797587 208 - 228573443 ttatgaagtacataaagtcctagctaaaataattaagctagaaaaag-tataaaaggcatccaaattggaaaggaagaagtaa-----attttttctattcacagaaaacatcatcttatacat------aaaaaaacccaaaagattcaacaaaaag-ctcttagaactaataaaatgaattcagcaaagttgcaggattcaaagtaaagattcaaaaaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 44374755 210 + 99763055 ttatgaagtacataaagtcctagctaaaataattaagcaagaaaaagatataaaaggcatccaaattggaaaggaagaagtaa----aattttttctattcacagaaaacatcatcttatatat------aaaaggaccctaaagattcaacaaaaag-ttcttagaactaataaaatgaattcaacaaagttgcaggattcaaagcaaagattcaaaaaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 6076 212 - 24701 ttatgaagtacataaagtcctagctaaaataattcagcaagaaaaagatataaa-ggcatccaaattggaaaggaagaagtaagtaaaattttttctattcacagaaaacatcatcttatatat-------taaaaaccctaaagattcaacaaaaag-ctcttagaactaataaaattaattcagcaaagttgcaggattcaaagtaaagattcaaaaaa i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67505323 210 - 121039945 ttatgaagtacataaagtcctagctaaaataattaagcaagaaaaagatataaaagacatccaaattggaaaggaagaagtaa----aattttctctattcacagaaaacatcatcttatatat------aaaaagaccctaaagattcaacaaaaag-ttcttagaactaataaaatgaattcaacaaagttgcaggattcaaagtaaagattcaaaaaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23413798 208 + 169600520 ttatgacgtacataaagtcccagctaaaataattaagcaagaaaaagatataaaaggcatccaaattggaaaggaagaagtaa----aattttctctattcaccgaaaacatcatc--atatat------taaaaaaccctaaagattcaacaaaaaatttcttagaactaataaaatgaattcaacaaagctgcaggattcaaagtaaagattcaaaaa- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24017772 208 + 171882078 ttatgacgtacataaagtcccagctaaaataattaagcaagaaaaagatataaaaggcatccaaattggaaaggaagaagtaa----aattttctctattcaccgaaaacatcatc--atatat------taaaaaaccctaaagattcaacaaaaaatttcttagaactaataaaatgaattcaacaaagttgcaggattcaaagtaaagattcaaaaa- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13262603 208 - 40200012 ttatgacgtacataaagtcccagctaaaataattaagcaagaaaaagatataaaaggcatccaaattggaaaggaagaagtaa----aattttctctattcaccgaaaacatcatc--atatat------taaaaaaccctaaagattcaacaaaaaatttcttagaactaataaaatgaattcaacaaagttgcaggattcaaagtaaagattcaaaaa- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3250397 210 + 7633303 ttatgaagtacataaagtcccagctaaaataattaagcaagaaaaagatataaaaggcatccaaattggaaaggaagaagtaa----aattttctctattcaccgaaaacatcatcttatatat------taaaaaaccctaaagattcaacaaaaaatttcttagaactaataaaatgaattcaacaaagttgcaggattcaaagtaaagattcaaaaa- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21951596 216 - 58131712 ttatgaagtacataaagtcccagctaaaataattaagcaagaaaaagatataaaaggcatccaaattggaaaggaagaagtaa----aattttctctattcacagaaaacatcatcttatatatataaaaaaaaaaacgctaaagattcaacaaaaaatttcttagaactaataaaatcaattcaacaaagttgcaggattcaaagtaaagattcaaaaa- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 46467 210 + 2620224 ttatgaagtacataaagtcccagctaaaataattaagcaagaaaaagatataaaaggcatccaaattggaaaggaagaagtaa----aattttctctattcactgaaaacatcatcttatatat------taaaaaatcctaaagattcaacaaaaaatttcttagaactaataaaatgaattcaacaaagttgcaggattcaaagtaaagattcaaaaa- i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24186650 210 + 132174527 ttatgaagtacatatagtcctagataaaataattaagcaagaaaaagatataaaaggcatccaaattagaaaggaagaagtaa----aactttctctattcacagaaaacattatcttatgtat-------agaaaatcataaagattcaacagaaaaattcttggaactaataaaaataattccacaaagtttcaggattcaaagtaaagattcaaaaaa i calJac3.chr10 C 0 I 11 s saiBol1.JH378136 10582195 208 - 21366645 ttacgaagtacatatagtcctagataaaataattaagcaagaaaaagatataaaaggcatccgaattggaaaggaagaagtaa----aattttctctattcacagaaaacattatcttatgtat-------agaaaaccataaagagtcaacagaaaaattcttggaactaataaaaagaattc--cagagtttcaggattcaaagtaaagatttaaaaaa i saiBol1.JH378136 C 0 I 21 s cebCap1.NW_016107324v1 3732906 210 - 13033340 ttgtgaagtacatatagtcctagataaaataattaagcaaggaaaagatataaaaggcatctgaattggaaaggaagaagtaa----aattttctctattcacagaaaacgttatcttatgtat-------agaaaaccataaagattcaacagaaaaattcttggaactaataaaaagaattccacaaagtttcaggattcaaagtaaagattcaaaaaa i cebCap1.NW_016107324v1 I 24 I 1585 s aotNan1.NW_018501505v1 5225114 205 + 11604778 ttatgaagtacatatagtcctagataaaataattaagcaagaaaaagatataaaaggcatccaaattggaaaggaagaagtaa----aattttctctattcacagaaaacattatcttatgtat-------tgaaa-----aaagattcaacagaaaaattcttggaactaataaaaagaattccacaaagtttcaggattcaaagtaaagattcagaaaa i aotNan1.NW_018501505v1 C 0 I 11 e otoGar3.GL873530 132194 0 + 36342412 C e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=3310135.000000 s hg38.chrUn_KI270749v1 15238 496 + 158759 a-------cacaaacagcaaacattctg-aaaaggaaattaagaaaacaatccatttgc----aatggcatcaaactgaataaaatactttggaataaacttagccggtgggg------------gaaagacttgtacactgaatactgcaaaatattgctgaaagaaattaaggaagacacaaataaatggaaagctatctcatttttgtgaattcaaagaatatttttaaattctaatactagccaaagcaatttacagatttgatgtaatcccttggaattgtataaattccaatgataattttagagaaatagaaaggacaattctaaaatccatatggaaccacaatggaccctgaatatccaaaacaatcctaagaaagagaaac--agttagaggcctcacattttctgactttgaaatatactacaaagctacagcaatcccaatagtgtgatattaatgtaaaactaatcatatagatgaatggaacagaatggattattggaacagaataga s panTro5.chr1 101797795 494 - 228573443 a-------cacaaacagcaaacattctg-aaaaggaaattaagaaaataatccatttac----aatggcatcaaaatgaataaaatactttggaataaacttagccagtgggg------------gaaagaattgtacactgaatactgcaaagtattgttgaaagaagttaaggaagacacaagtaaatgaaaagccatctcatttccatgaattgaaagaatatttttaaattctaatactagccaaagcaatttacagatttaatgtaatcccttggaattgtataaattccaatgataattttagagaaatagaaaggacagttctaaaatccatatggg-ccacaacggaccctgaatatcaaaaa-aatccttagaaagagaaac--acttagaggcctcacattttctgactttgaaatatactacaaatctacagcaatcccaatagtgtgatattaacgtaaaactaatcatatagatgaatggaacagaatggattagtggaacagaataga i panTro5.chr1 C 0 C 0 s panPan2.chr15 44374965 506 + 99763055 a-------cacaaacagcgaacattatg-aaaaggaaattaagaaagcaatccatttgcttgtaatggcatcaaaatgaataaaataattaggaatatacttagccagtggggggcggggagcacgggagacttataaactgaatactgcaaaacattgctgaaagaaattaaggaagacacaagtaaatggaaacacatctcattttaatgaattgaaagaatatttttgaattctaatactagccaaagcaatttacagatttgatgtaatccc--------ataaaaattccaatgataattttagagaaatagaaaggacaattctaaaatccatatggaaacacaacagaccctgaatatccaaaacaatcctaagaaaggaaaacaaagttagaggcctcacattttctgactttgcaatgtactacaaagctacagcaatcccaatagtgtcatattaacataaaattggtcatatagatgaatggaacagaatagattagtggaacagaataga i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 6288 495 - 24701 a-------cacaaacagcaaacattctg-aagaggaaattaagaaaacaatccatttgc----aatggcatcaaaatgaataaaatactttggaatacacttagccagtgggg------------gaaagacttgtacactgaatactgcaaaatattgctgaaagaaattaaggaagacacaaataaatggaaagacatctcatttttatgaattcaaagaatatttttaaattctaatactagccaaagcaatttacagatttgatgtaatcccttggaattgtataaattccaatgataattttagagaaatagaaaggagaattctaaaatccatatggaaccacaacggaccctgaatatccaaaacaatcctaag-aagagaaac--agttagaggcctcacattttctgactttgaaatatactccaaagctacagcaatcccaatagtgtgatattaatgtaaaactaatcatatagatgaatggaacagaatggattattggaacagaataga i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67505533 503 - 121039945 a-------cacaaatagcgaacattctg-aaaaggaaattaagaaagcaatccgtttgcttgcaatggcatcaaaatgaataaaataattaggaatatacttagccggtgggg--aggggggcgcaggagacttgtacactgaatactgcaaaacattgctgaaagaaattaaggaagacacaagtaaatggaaagacatctcatttt-atgaattgaaagaatatttttaaattctaatactagccaaagcaatttacagatttgatgtaatccc--------ataaaaattccaatgataattttagagaaatagaaaggacaattctaaaatccatataaaaccacaacggaccctgaatatccaaaacaatcctaagaaagaaaaacaaagttagaggcctcacattttctgactttgaaatgtactacaaagctacagcaatcccaatagtgtcatattaacataaaattaatcatatagatgaatggaacagaatagattagtggaacagaataga i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23414006 463 + 169600520 -----------acacagcaaacattctgaaaaaggaaaataagaaagcaatccatttgc----aatagcatcaaaatgaataaaatacttaggaataaactcagccagggagg-----------ggaaagacttgtacactgaatactgcaaaacattgctgaaagaaattaaggaagacacaagtaaatggaaagatatctcattttcatgaattgaaagaatatttttaaattctaatactagccaaagcaatgtacagatttgatgtaatccc-------tataaaaattccaatgataattttacagaaatagaaaagacaattctaaaatccatatggaaccacagtggaccctgaatatccaaaacaatcctaagaaagaaaaacaaagctagaggcctcacattttctggctctgaaatatactacaaagctgcagcaatccca--------atattaacataaaattcgtcatatagatgaatgg------------------aacagaataga i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24017980 463 + 171882078 -----------acacagcaaacattctgaaaaaggaaaataagaaagcaatccatttgc----aatagcatcaaaatgaataaaatacttaggaataaacttagccagggagg-----------ggaaagacttgtacactgaatactgcaaaacattgctgaaagaaattaaggaagacacaagtaaatggaaagatatctcattttcatgaattgaaagaatatttttaaattctaatactagccaaagcaatgtacagatttgatgtaatccc-------tataaaaattccaatgataattttacagaaatagaaaagacaattctaaaatccatatggaaccacagtggaccctgaatatccaaaacaatcctaagaaagaaaaacaaagttagaggcctcacattttctggctctgaaatatactacaaagctgcagcaatccca--------atattaacataaaattcgtcatatagatgaatgg------------------aacagaataga i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13262811 463 - 40200012 -----------acacagcaaacattctgaaaaaggaaaataagaaagcaatccatttgc----aatagcatcaaaatgaataaaatacttaggaataaacttagccagggagg-----------ggaaagacttgtacactgaatactgcaaaacattgctgaaagaaattaaggaagacacaagtaaatggaaagatatctcattttcatgaattgaaagaatatttttaaattctaatactagccaaagcaatgtacagatttgatgtaatccc-------tataaaaattccaatgataattttacagaaatagaaaagacaattctaaaatccatatggaaccacagtggaccctgaatatccaaaacaatcctaagaaagaaaaacaaagctagaggcctcacattttctggctctgaaatatactacaaagctgcagcaatccca--------atattaacataaaattcgtcatatagatgaatgg------------------aacagaataga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3250607 463 + 7633303 -----------acacagcaaacattctgaaaaaggaaaataagaaagcaatccatttgc----aatagcatcaaaatgaataaaatacttaggaataaacttagccagggagg-----------ggaaagacttgtacactgaatactgcaaaacattgctgaaagaaattaaggaagacacaagtaaatggaaaggtatctcattttcatgaattgaaagaatatttttaaattctaatactagccaaagcaatgtacagatttgatgtaatccc-------tataaaacttccaatgatgattttacagaaatagaaaagacaattctaaaatccatatggaaccacagtggaccctgaatatccaaaacaatcctaagaaagaaaaacaaagttagaggcctcacattttctggctttgaaatatactacaaagctgcagcaatccca--------atattaacataaaattagtcatatagatgaatgg------------------aacagaatagg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21951812 463 - 58131712 -----------acaccgcaaacattctgaaaaaggaaaataagaaagccatccatttgc----aatagcatcaaaatgaataaaatacttaggaataaacttagccagggagg-----------ggaaagacttgtacactgaatactgcaaaacattgctgaaaggaattaaggaagacacaagtaaatggaaaggtatctcattttcatgaattgaaagaatatttttaaattctaatactagccaaagcaatgtacagatttgatgtaatccc-------tataaaaattccaatgataattttacagaaatagaaaagacaattctaaaatccatatggaaccacagtggaccctgaatatccaaaacaatcctaagaaagaaaaacaaagttagaggcctcacattttctggctttgaaatatactacaaagctgcagcaatccca--------atattaacataaaattcgtcatatagatgaatgg------------------aacagaataga i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 46677 462 + 2620224 -----------acacagcaaacattctgaaaaaggaaaataagaaagcaatccatttgc----aatagcatcaaaatgaataaaatacttaggaataaacttagccagggagg-----------ggaaagacttgtacactgaatactgcaaaacattgctgaaagaaattaaggaagacacaagtaaatggaaaggtatctcattttcatgaattgaaagaatatttttaaattctaatactagccaaagcaatgtacagatttgatgtaatccc-------tataaaacttccaatgatgattttacagaaatagaaaagacaattctaaaatccatatggaaccacagtggaccctgaatatccaaaacaatcctaagaaagaaaaacaaagttagaggcctcacattttctggctttgaaatatactacaaagctgcagcaatccca--------atattaacataaaattagtcatatagatgaatgg-------------------acagaataga i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24186871 493 + 132174527 aaaaac--cacaaacagcaaacattctg-aaaaggaaatcaagaaagcaatccatttgc----aatggcatcaaaatgaataaaatacttaggaataaac----ttagggagg-----------ggaaagacttgtacactgaatactgcaaaacattgctgaaagaaattaaggaagacacaagtaaatggaaagacatccccttttcatggattgaaagaatatttttaaattctaatactagccaatgcaatttacaggtttgatataatccc-------tataaaaatttcaatgataattttacagaaataaaaaagacagttctaaaattcatatggaacaacaagggaccctgaatgtccaaaacaatcctaagaaagaaaaacaaagttagaggtctcacatattctgattttgaaatatattacaaagctacagcaatcccaattgtgtgatattaacataaaattattcatatagatgaatggaacagaatagaccagtggatcagaataga i calJac3.chr10 I 11 C 0 s saiBol1.JH378136 10582424 498 - 21366645 aaaacccacacaaacagcaaacattctg-aaaaggaaatcaagaaagcaatctatttgc----aatggcatcaaaatgaataaaatacttaggaataaacatagtcagggagg-----------agaaagacttgtacactgaatactgcaaaacattgctgaaagaaattaaggaagacacaagtaaatggaaagacatcccattttcatggattgaaagaatatttttaaattctaatactagtcaaagcaatttacaggtttgatataatccc-------tagaaaaattccaatgataattttacagaaatagaaaagacagttctaaaattcatatggaacaacaagggaccctgaatgtccaaaacaatcctaagaaagaaaaacaaagttagagatctcacatattctga-cttgaaatatattacaaagctacagcaatcccaattgtgtgatattaacataaaattagtcatatagatgaatggaacataatagactagtggatcagaataga i saiBol1.JH378136 I 21 C 0 s aotNan1.NW_018501505v1 5225330 488 + 11604778 a-------cacgaacagcaaacattctg-aaaaggaaatcaagaaagcaatccatttgc----aaaggcatcaaaatgaataaaatacttaggaataaactgagtcagggagg-----------ggaaagacttgtacactgaatactgcaaaacattgctgaaagaaattaaggaagacacaagtaaatggagagacatcccattttcatggattgaaagaatatttttaaattctaatactagccaaagcaatttacaggtttgatataatccc-------tataaaaattccaatgataattttacagaaatagaaaagacagttctaaaattcatatggaactacaagggaccctgaatgtccaaaacaatcctaagaaagaaaaacaaagttagag-tctcacatattctgactttgaaatatattacaaagctacagcaatcccaattgtgtgatattaacataaa---agtcatatagatgaatggaacagaatagaccagtggatcagaataga i aotNan1.NW_018501505v1 I 11 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=49603.000000 s hg38.chrUn_KI270749v1 15734 7 + 158759 aagccca s panTro5.chr1 101798289 7 - 228573443 aagccca i panTro5.chr1 C 0 C 0 s panPan2.chr15 44375471 7 + 99763055 aagtcca i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 6783 7 - 24701 aagccca i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67506036 7 - 121039945 aagtcca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23414469 7 + 169600520 aagccca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24018443 7 + 171882078 aagccca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13263274 7 - 40200012 aagccca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3251070 7 + 7633303 aagccca i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21952275 7 - 58131712 aagccca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 47139 7 + 2620224 aagccca i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10582922 7 - 21366645 aagccca i saiBol1.JH378136 C 0 I 923 s aotNan1.NW_018501505v1 5225818 7 + 11604778 aagccca i aotNan1.NW_018501505v1 C 0 I 1464 e otoGar3.GL873530 132194 0 + 36342412 C e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e calJac3.chr10 24187364 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=849701.000000 s hg38.chrUn_KI270749v1 15741 194 + 158759 ctgggaggccaaggcgggcagatcacctaaggtcgggagttcaagaccagcctggctaacatggtgaaaccccgtctctatgaaaaaatacaaaaattagctgggcatggttatgggcacctgtaattccagctacttgggaggctgaggtaggagaatcgcttgaacccaggaggaacaggttgcagtgagcc s panTro5.chr1 101798296 194 - 228573443 ctgggaggccaaggcgggcagatcacctaaggtcaggagttcaaaaccagcctggctaacatggtgaaaccccgtctctatgaaaaaatacaaaaattagctgggcatggttatgggcacctgtaattccagctactcaggaggctgaggtaggagaatcgcttgaacccaggaggaagaggttgcagtgagcc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44375478 194 + 99763055 ttgggaggccaaggtgggtggatcacctaaggtcaggagttcaagaccagcctggctaacatggtgaaaccccgtctctgtgaaaaaatacaaaaattagctgggcatggttgtggacacctgtaatcccagctactcggggggctgaggtaggagaatcacttgaacccagaaggaagaggttgcagtgagcc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 6790 193 - 24701 ctgggaggccaaggcgggcagatcacctaaggtcgggagttcaagaccagcctggctaacatggtgaaaccccgtctctatgaaaaaatacaaaaattagctgggcatggttatgggcacctgtaattccagctactcgggaggctgaggtaggagaatcgcttgaacccaggagg-agaggttgcagtgagcc i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67506043 194 - 121039945 ttgggaggccaaggcgggtggatcacctaaggtcaggagttcaagacctgcctggctaacatggtgaaaccccatctctgtgaaaaaatacaaaaattagctgggtgtggttgtgggtgcctgtaatcccagctacttggaaggctgaggtgggagaatcgcttgaacccaggaggaagaggttgcagtgagcc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23414476 179 + 169600520 ttgggaggccgaggcgggtggatcacctaaggtcagcagttcaagaccagcatggctaacatggtgaaaccccatctctatgaaaaaatacagaaattagcttggtgtggtggtgggtgcctgtaatctcagctactcaggaggctgaggtaggataatcgcttgaacccag---------------gtgagcc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24018450 179 + 171882078 ttgggaggccgaggcgggtggatcacctaaggtcagcagttcaagaccagcatggctaacatggtgaaaccccatctctatgaaaaaatacagaaattagcttggtgtggtggtgggtgcctgtaatctcagctactcaggaggctgaggtaggataatcgcttgaacccag---------------gtgagcc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13263281 194 - 40200012 ttgggaggccgaggcgggtggatcacctaaggtcagcagttcaagaccagcatggctaacatggtgaaaccccatctctatgaaaaaatacagaaattagcttggtgtggtggtgggtgcctgtaatctcagctactcaggaggctgaggtaggataatcgcttgaacccaggtcgaagaggttgcagtgagcc i macNem1.NW_012010577v1 C 0 I 1058 s cerAty1.NW_012000887v1 3251077 194 + 7633303 ttgggaggctgaggcgggtggatcacctaaggtcaggagttcaagaccagcctggctaacatggtgaaaccctgtctctatgacaaaatacaaaaattagctgggtgtggtggtgggtgcctgtaatcccagctactcaggaggctgaggtaggagaatcgcttgaacccaggacgaagaggttgcagtgagcc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21952282 194 - 58131712 ttgggaggcctaggcgggtggatcacctaaggtcagcagttcaagaccagcctggctaacatggtgaaaccccatctctatgaaaaaatacagaaattagcttggtgtggtggtgggtgcctgtaatctcagctactcaggaggctgaggtaggagaatcgcttgaacccaggtcgaagaggttgcagtgagcc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 47146 193 + 2620224 ttgggaggctgaggcaggtggatcacctaaggtcaggagttcaagaccagcctggctaacatggtgaaaccctgtctctatgaaaaaatacaaaaattagctc-atgtagtggtgggtgcctgtaatcccagctactcaggaggctgaagtaggagaatcgcttgaacccaggacgaagaggttgcagtgagcc i manLeu1.NW_012108674v1 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24187364 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=192593.000000 s hg38.chrUn_KI270749v1 15935 56 + 158759 aagatcacaccactgcactcccaccttggttacagagcaagactccatctcaaaaa s panTro5.chr1 101798490 56 - 228573443 aagatcacaccactgcactcccgccttggttacagagcaagactccatctcaaaaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 44375672 55 + 99763055 aagatcacaccactgcactcccacctgggtga-agaacaagacttcatctcaaaaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 6983 56 - 24701 aagatcacaccactgcactcccgccttggttacagagcaagactccatctcaaaaa i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67506237 56 - 121039945 gagatcacaccactgcactcccacctgggtgacagagcaagacttcatctcaaaaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23414655 56 + 169600520 gaaatggcaccactgcactcccacctgggtgactgagcaaaactccatctcaaaaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24018629 56 + 171882078 gaaatggcaccactgcactcccacctgggtgactgagcaaaactccatctccaaaa i macFas5.chr7 C 0 C 0 s cerAty1.NW_012000887v1 3251271 56 + 7633303 gagatggcaccaccggactcccgcctgggtgactgagcaaaactccatctcaaaaa i cerAty1.NW_012000887v1 C 0 I 989 s chlSab2.chr26 21952476 56 - 58131712 gagatggcaccaccgcactcccgcctgggtgactgagcaaaactccatctcaaaaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 47339 56 + 2620224 gagatggcaccactgcactcccgcctgggtgactgagcaaaactccatctcaaaaa i manLeu1.NW_012108674v1 C 0 I 989 e otoGar3.GL873530 132194 0 + 36342412 C e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24187364 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I a score=8737.000000 s hg38.chrUn_KI270749v1 15991 4 + 158759 gaaa s panTro5.chr1 101798546 4 - 228573443 aaaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 44375727 4 + 99763055 aaaa i panPan2.chr15 C 0 I 976 s gorGor5.CYUI01005671v1 7039 4 - 24701 gaaa i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67506293 4 - 121039945 aaaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23414711 4 + 169600520 aaaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24018685 4 + 171882078 aaaa i macFas5.chr7 C 0 C 0 s chlSab2.chr26 21952532 4 - 58131712 aaaa i chlSab2.chr26 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24187364 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I a score=4389.000000 s hg38.chrUn_KI270749v1 15995 4 + 158759 gaaa s panTro5.chr1 101798550 4 - 228573443 gaaa i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 7043 4 - 24701 gaaa i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr7 23414715 4 + 169600520 aaaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24018689 4 + 171882078 aaaa i macFas5.chr7 C 0 C 0 s chlSab2.chr26 21952536 4 - 58131712 aaaa i chlSab2.chr26 C 0 I 989 e otoGar3.GL873530 132194 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24187364 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e nomLeu3.chr6 67506297 0 - 121039945 C e panPan2.chr15 44375731 976 + 99763055 I a score=-6786.000000 s hg38.chrUn_KI270749v1 15999 92 + 158759 gaaataagaaagaaagaaagaaagaaagaaagaaaaagaaagaaagaaaga----------aagaaagaaggaaggaaggaaggaaggaaggaaggaaggaa s panTro5.chr1 101798554 43 - 228573443 gaaa---------------gaaagaaagaaagaaa--gaaagaaagaaaga----------aagaaagaa-------------------------------- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 7047 100 - 24701 gaaataagaaagaaagaaagaaagaaagaaagaaa--gaaagaaagaaagaagaaggaaggaaggaagaaggaaggaaggaaggaaggaaggaaggaaggaa i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67506297 17 - 121039945 -------------------------------------------aaaaaaaa----------gagaaagaa-------------------------------- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23414719 11 + 169600520 -------------------------------------------------aa----------aaaaaagaa-------------------------------- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24018693 11 + 171882078 -------------------------------------------------aa----------aaaaaaaaa-------------------------------- i macFas5.chr7 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13414194 3028 + 40214260 I e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24187364 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e panPan2.chr15 44375731 976 + 99763055 I a score=307.000000 s hg38.chrUn_KI270749v1 16091 11 + 158759 ggaaggaaagc s panTro5.chr1 101798597 3 - 228573443 --------agc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 7147 11 - 24701 agaaagaaaga i gorGor5.CYUI01005671v1 C 0 C 0 s canFam3.chr30 13417222 11 + 40214260 ggaactgaata i canFam3.chr30 I 3028 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23414730 0 + 169600520 C e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24187364 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e macFas5.chr7 24018704 0 + 171882078 C e nomLeu3.chr6 67506314 0 - 121039945 C e panPan2.chr15 44375731 976 + 99763055 I a score=1578058.000000 s hg38.chrUn_KI270749v1 16102 800 + 158759 aagcccagaaataaacccacatgcatatagtcaaatgatctttgatgagggtgccaaaactatacaatggagaaaggataatttcttcaacaaatattgttgggaaaactggatatccatatgcaaaagaatgaaagtgaaccgttatcttaaaactgttcacaaatgttaactccaaatggattgaagacttaaatgtaagaactaaagctgtaaaact---acaagaaaacataaagaaaggctttatcacattggtcgtggcaataattccttggatttgataccaaaagcacaggcaacaaaagcaaaaataggttagggtgattacatcaagataaaatgcttctgtgcaaaaaaggaaa----caacagagtgaacaggcagcctatagaattggagaaaatatttgaaaaccgtatatgtgctaagggcttaatatccaaaatatataagaaac----------acctagaactcaaaagcaaataaacacata-----------------------acccaattttaaaatggccaaattcttaaatagatatttttcaggaagacatgcaaatgaccaacagggatataaaaagatactcaacatcattaatcatcagggaaatgctaattaaaatcacaacgggatttatcacctcataactgt----atgaccat--tttaaaaaaaaga-aaatagcaagtgttgatgaagatgtggagaaattgaattagaaccttatgtactgtcagtaggaatgtaaaatggtagagccactatggaaaacagtatggagggtcctcaaaacattaaaaaatagacctaccatatgatgcag s panTro5.chr1 101798600 802 - 228573443 aggcccagaaataaacccacatgcatatagtcaaatgatctttgacgagggtgccaaaactatacaatggagaaaggataatttcttcaacaaatattgttgggaaaactggatattcatatgcaaaagaatgaaagtgaacccttatcttaca-ctattcacaaatgttaactccaaatggattgaagacttaaatgtaataacaaaagctgtaaaactcctacaagaaaacataaagaaagcctttatcacattggtcgtggcaataattccttggatttgacaccaaaagcacaggcaacgaaagcaaaaataggttagggtgattacatcaaggtaaaatgcttctgtgcaaaaaaggaaa----caacagagtgaacaggcagcctatagaactggagaaattatttgaaaaccgtatatgtgttaagggcttaatatccaaaatatataagaaac----------acctataactcaaaagcaaataaacacata-----------------------actcaattttaaaatggccaaattcttaaatagatatttttcaggaagacatgcaaatgaccaacagggatataaaaatatactcaacatcattaatcattagggaaatgttaattaaaatcactacaggatttatcacctcataactgt----atgaccat--tttgaaaaaaaga-aaatagcaagtgttgatgaagatgtggagaaattgaattagaaccttacgtactgtcagtaggaatgtaaaatggtagagccactatggaaaacagtatggagggtcctcaaaacattaaaaagtagacctaccatatgatgcag i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 7158 799 - 24701 aagcccagaaataaacccacatgcagatagtcaaatgatctttgacgagggtgccaaaactatacaatggagaaaggataatttcttcaacaaatattgttgtcaaaactggatatccatatgcaaaagaatgaaagtgaacccttatcttaca-ctgttcacaaatgttaactccaaatggattgaagacttaaatgtaagaactaaagctgtaaaact---acaagaaaacataaagaaaggctttatcacattggtcgtggcaataattccttggatttgataccaaaagcacaagcaacaaaagcaaaaataggttagggtgattacatcaagataaaacgcttctgtgcaaaaaaggaaa----caacagagtgaacaggcagcctatagaattggagaaaatatttgaaaaccatatatgtgctaagggcttaatatccaaaatatataagaaac----------acctataactcaaaagcaaataaacacata-----------------------acccaattttaaaatggccaaattcttaaatagatatttttcaggaagacatgcaaatgaccaacggggatataaaaagatactcaacatcattaatcatcagggaaatgctaattaaaatcacaacaggatttatcacctcataactgt----atgaccat--ttttaaaaaaaga-aaatagcaagtgttgatgaagatgtggagaaattgaattagaaccttatgtactgtcagtaggaatgtaaaatggtagagccactatggaaaacagtatggagggtcctcaaaacattaaaaaatagacctaccataggatgtag i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67506314 801 - 121039945 -agcccagaaataaacccacatgcatatagtcaaatgatctttgatgagggtgccaaaactatacgatggagaaaggatattttttttaacaaatattgttgggaaaactggatatccatatacaaaagaatgaaagggaacccttatcttaca-ctgttcacaaatgttaactccaaatggattgaagacttaaatgtaagacctaaagctgtaaaactcctacaagaaaacataaagaaaggctttatcccattggtcgtggcaataattccttggatttgacaccaaaagcacaggcaaccaaagcaaaaataggttagagtgattacatcaagataaaatgcttctgtgcaaaaaaggaaa----caacagagtgaacaggcagcctacagaattggagaaaatatttgaaaaccatatatgtgctgagggcttaatatccaaaatatataagaaac----------acctataactcaaaagcaaataaacaaata-----------------------acccaatttaaaaatgtccaagttcttaaatagatatttttcaggaagacatgcaaatgaccaatagggatatgaaaagatactcaacatcattaatcatcagggaaatgctaattaaaatcacaataggatttatcacctcataactgt----atgaccat--ttttaaaaaaaga-aaatagcaagtattgatgaagatgtggagaaattgaattggaaccctatgtaccgtcagtaggaatgtaaaatgatagagtcattatggaaaacagtatggagggtcctcaaaacattaaaaaatagacctaccatatgatgcag i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23414730 800 + 169600520 -agcccagaagtaaacccacaagcatatagtcaaatgatctttgatgagggtgccaaaactgcacaatggagaaaggataatttcttcaacaaatattgttgagaaaactggatatacatatgccaaagaatgaaagcgaacccttatcttaca-ctgttcaaaaatgctaactccaaatggattaaagacttaaatgtaaggcctaaagctgtaaaactcctacaagaaaacataaagaaaggctttatcccattagtcgtggcaataattccttggatttgacaccaaaagcacaggcaaccaaagcaaaaataggttagagtgattacgtcgagataaaatgcttctgtgcaataaaggaaa----caactgagtgaacaggcagcctacagaattggagaaaatatttgaaaaccatatatgtgctaagggcttaatatccaaaatatataagaaac----------acctataactcaaaagcaaataaataaata-----------------------acccaatttaaaaatggccaagttcttaaatagatattttgcaggaagacatgcaaatgaccaacagggatatgaaaagatactcaacatcattaatcatcagggaaattccaattaaaatcacaataggatttatcacctcataactgt----atgacca---cttaaaaaaataa-aaatagcaagtgttgatgaagatgtgaagaaattgaattggaacactatgtactgtcagtaggaatgtaaaatggtagagccactatggaaaacagtacggagggtcctcaaaagattgaaaaatagacctaccatatgatgcag i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24018704 800 + 171882078 -agcccagaagtaaacccacaagcatatagtcaaatgatctttgatgagggtgccaaaactgcacaatggagaaaggataatttcttcaacaaatattgttgagaaaactggatatacatatgccaaagaatgaaagcgaacccttatcttaca-ctgttcaaaaatgctaactccaaatggattaaagacttaaatgtaaggcctaaagctgtaaaactcctacaagaaaacataaagaaaggctttatcccattagtcgtggcaataattccttggatttgacaccaaaagcacaggcaaccaaagcaaaaataggttagagtgattacgtcgagataaaatgcttctgtgcaataaaggaaa----caactgagtgaacaggcagcctacagaattggagaaaatatttgaaaaccatatatgtgctaagggcttaatatccaaaatatataagaaac----------acctataactcaaaagcaaataaataaata-----------------------acccaatttaaaaatggccaagttcttaaatagatattttgcaggaagacatgcaaatgaccaacagggatatgaaaagatactcaacatcattaatcatcagggaaattccaattaaaatcacaataggatttatcacctcataactgt----atgacca---cttaaaaaaataa-aaatagcaagtgttgatgaagatgtgaagaaattgaattggaacactatgtactgtcagtaggaatgtaaaatggtagagccactatggaaaacagtacggagggtcctcaaaagattgaaaaatagacctaccatatgatgcag i macFas5.chr7 C 0 C 0 s calJac3.chr10 24187364 781 + 132174527 aagcccagaaataaacccacatgcttttggtcaaatgatctttgatgagagtgcaaagactacacaatggagaaaggatagtttcttcagcaaattgttttgggaaaactggatatccatatgcaaaagaatgaaagtgaacccttatcttaca-ctggtcacaaatgttaactccaaatggattaaagacttaaatgtaagacctaaaactgtaaaactcctgaaagaaaacataaagaaaggctttatcacattggccttggcaataattccttggatttgataccaaaagcacaggcaaccaaagcaaaaataggttagagggattacatcaagataaaatgcttctgggcaataaaaagta-----aatagagtgaacaggcagcctacagaattggagaagttatttgaaaaccatatatgtgataagggtataatatctaaaatatataagaaat----------acctgtaactcagaagcaaagaaaaaaa-a-----------------------atccaattttaaaatgtccaa-ttcttaaataggcatttttcaggaagacatacaaatgaccaacaggtatatgaaaagatactcaacattattaatcatcagggaaatgctgattaaaatcacaatagcatttatcacctcataactgc----ataagcgttatttaaaaaaata---------atgtgttgatgaagaagtggaaaagttgaattggaatcctgtgtactgtcagtaggaatgtaaaatggtacagtcactatggaaaacatcatggagggttctcaaaacattaaaaaata------------gatgcag i calJac3.chr10 C 0 C 0 s canFam3.chr30 13417233 825 + 40214260 gagtcgagaaataaacccattcatatatggccaactgatctttgatgagggttccaagactacataatggagaaaggatagttttttcaacaaaacatgttgagaaaaac-tacatccaaatgcagaagaatgaaattggacccttat-----a-ccatacataaaaatcaatttaaaatggaataaagacttaaacatgggacctaaaactataaaacttctagaagaaaaca-agcaaaaaacttcatagcattggttgtggcaaagatttcttggatataacatcaaaagcacaaacaac-aaaacaaaaacagacaaaag-gaccacatcaaaataaaaggttactgtacaataaagaaaacaatcaacaaagtaaaaaggcaacctctggaatataagaaaatatttgcaacccacatatatgacaaggggtgaatattcaaagtatataaagaactgcaaactcagtttataaaatacatatatatacatacatacatacatgcatgcatacacacataatcaatttaaacatga-gaaatacttgaatagtcatttctcc--aagacatacaaacagcc-acagatacatttaaaaatgctcaccatcactaatcatcagggaaatgcaaatcaaaaccacaatgagatt--ttatatcacacctgttaggatggacat--tataaaaaaaaaacagaaaataaatattagtaagaatgtagacaaa---agtggaacccttgtgcactgttggtgggaatgtaaaatggcacagcagctatggaaaacagtatggaggttcctacaaaaatt-aaaagcagaaataatatctgatccca i canFam3.chr30 C 0 C 0 e otoGar3.GL873530 132194 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e panPan2.chr15 44375731 976 + 99763055 I a score=46627.000000 s hg38.chrUn_KI270749v1 16902 33 + 158759 caatcccacttgtgggcatttttccaaaataat s panTro5.chr1 101799402 33 - 228573443 caatcccacttgtgggcatttttccaaaataat i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 7957 33 - 24701 caatcccacttgtgggcattttcccaaaataat i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67507115 21 - 121039945 caatcccacttgtgggcattt------------ i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23415530 21 + 169600520 caatcccacttgtgggcattt------------ i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24019504 21 + 171882078 caatcccacttgtgggcattt------------ i macFas5.chr7 C 0 C 0 s calJac3.chr10 24188145 19 + 132174527 caatcccacttgtggg--ttt------------ i calJac3.chr10 C 0 C 0 s otoGar3.GL873530 132194 21 + 36342412 cactccaatttgggggtattt------------ i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13418058 33 + 40214260 caatcccacctgtgagtatttatccaaagtatt i canFam3.chr30 C 0 I 168 e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e panPan2.chr15 44375731 976 + 99763055 I a score=318414.000000 s hg38.chrUn_KI270749v1 16935 146 + 158759 tgaataa-----------ttccaaaataat-------tgaaaacaagatcttgaagtga----tatttgcattcccatattc-attacagaattattcacaatagccaaaaagtagaaacaatctaaaagtccatcatcaaatgaacagatgaagaaaatatggtatat s panTro5.chr1 101799435 142 - 228573443 tgaataa-----------ttccaaaataat-------tgaaagcaagatcttgaagtga----tatttgcattcccatattc-attacagaattattcacaatagccaaaaagtagaaacaatctaaaagtccatcatcaaatgaacagataaagaaaatatggt---- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 7990 146 - 24701 tgaataa-----------ttccaaaataat-------tgaaaacaagatcgtgaagtga----tatttgcattcccatattc-attacagaattattcacaatagccaaaaagtagaaacaatctaaaagtccgtcatcaaatgaacagatgaggaaaatatggtgtat i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67507136 139 - 121039945 ------------------ttccaaaataat-------tgaaaacaagatcttgaagtga----tatttgcattcccatgttc-attgcagaattattcacaatagccaaaaagtagaaacaatctaaatgtccatcatcaaatgaacagataaagacaatatggtgtgt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23415551 137 + 169600520 ------------------ttccaaaataat-------tgaaaacaagatcttgaagtta----tatttgcatt-ccatgttt--ttgcagaattattcacaatagccaaaaagtagaaacaatctaaatgtccatcatcaaataaacagataaagaaaatatggtatat i rheMac8.chr7 C 0 I 18 s macFas5.chr7 24019525 137 + 171882078 ------------------ttccaaaataat-------tgaaaacaagatcttgaagtta----tatttgcatt-ccatgttt--ttgcagaattattcacaatagccaaaaagtagaaacaatctaaatgtccatcatcaaataaacagataaagaaaatatggtatat i macFas5.chr7 C 0 C 0 s calJac3.chr10 24188164 139 + 132174527 ------------------ttccaaaacaat-------tgaaagcaaaatcttaaagtga----tatttgcattccaacactc-attgcaaaattattcacaatagccaaaaagtataaataacttagatgtccatcatcaaatgaatagataaagaaaatagggtgtgt i calJac3.chr10 C 0 C 0 s otoGar3.GL873530 132215 139 + 36342412 ------------------atccaaaataat-------tgtaaacagaatcttgaggtga----tatttgtact-ctatattccattgaggcattaatcacattagcagaaaggtgaaaacaacataaaaattcatcattagatgaatagataagaaaaatctgttatat i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13418259 168 + 40214260 tgaataaacaaataaaatctttaaaaaaataaaaaaataaaaataaaaactccaaccaaacagcatttgcactcccatgttc-attgctgcattattcacaatagccaagggatagaaacaatctaaatgtccattaacagatgaatggataaagaaaatgtgttatat i canFam3.chr30 I 168 C 0 e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e panPan2.chr15 44375731 976 + 99763055 I a score=-1633.000000 s hg38.chrUn_KI270749v1 17081 1 + 158759 -G s gorGor5.CYUI01005671v1 8136 1 - 24701 -g i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67507275 1 - 121039945 -g i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 24019662 1 + 171882078 -a i macFas5.chr7 C 0 C 0 s canFam3.chr30 13418427 1 + 40214260 t- i canFam3.chr30 C 0 C 0 e otoGar3.GL873530 132354 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23415688 18 + 169600520 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24188303 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e panPan2.chr15 44375731 976 + 99763055 I e panTro5.chr1 101799577 0 - 228573443 C a score=2499.000000 s hg38.chrUn_KI270749v1 17082 7 + 158759 TGTGTGT s panTro5.chr1 101799577 2 - 228573443 -----gt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8137 7 - 24701 tgtgtgt i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67507276 7 - 121039945 tgtgtgt i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 24019663 7 + 171882078 tacatat i macFas5.chr7 C 0 C 0 s calJac3.chr10 24188303 4 + 132174527 ---gtgc i calJac3.chr10 C 0 C 0 e otoGar3.GL873530 132354 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23415688 18 + 169600520 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e panPan2.chr15 44375731 976 + 99763055 I a score=10203.000000 s hg38.chrUn_KI270749v1 17089 11 + 158759 GTGtatatata s panTro5.chr1 101799579 11 - 228573443 gtttatatata i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8144 11 - 24701 gtatatgtata i gorGor5.CYUI01005671v1 C 0 C 0 s ponAbe2.chrUn 66609590 11 - 72422247 gtgtatatata i ponAbe2.chrUn N 0 C 0 s nomLeu3.chr6 67507283 11 - 121039945 gtgtgtgtata i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 24019670 11 + 171882078 atatgtatatg i macFas5.chr7 C 0 C 0 e otoGar3.GL873530 132354 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23415688 18 + 169600520 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24188307 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e panPan2.chr15 44375731 976 + 99763055 I a score=1820.000000 s hg38.chrUn_KI270749v1 17100 2 + 158759 ta s panTro5.chr1 101799590 2 - 228573443 ta i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8155 2 - 24701 ta i gorGor5.CYUI01005671v1 C 0 C 0 s ponAbe2.chrUn 66609601 2 - 72422247 ta i ponAbe2.chrUn C 0 I 19 s nomLeu3.chr6 67507294 2 - 121039945 ta i nomLeu3.chr6 C 0 C 0 e otoGar3.GL873530 132354 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23415688 18 + 169600520 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24188307 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e macFas5.chr7 24019681 0 + 171882078 C e panPan2.chr15 44375731 976 + 99763055 I a score=4350.000000 s hg38.chrUn_KI270749v1 17102 12 + 158759 t---atatatatgta s panTro5.chr1 101799592 12 - 228573443 t---atatatatata i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8157 15 - 24701 taccatatgtatata i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67507296 12 - 121039945 t---atatatatata i nomLeu3.chr6 C 0 C 0 e ponAbe2.chrUn 66609603 19 - 72422247 I e otoGar3.GL873530 132354 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23415688 18 + 169600520 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24188307 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e macFas5.chr7 24019681 0 + 171882078 C e panPan2.chr15 44375731 976 + 99763055 I a score=-618.000000 s hg38.chrUn_KI270749v1 17114 2 + 158759 tg s panTro5.chr1 101799604 1 - 228573443 t- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8172 2 - 24701 ta i gorGor5.CYUI01005671v1 C 0 I 1 e ponAbe2.chrUn 66609603 19 - 72422247 I e otoGar3.GL873530 132354 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23415688 18 + 169600520 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24188307 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e macFas5.chr7 24019681 0 + 171882078 C e nomLeu3.chr6 67507308 0 - 121039945 C e panPan2.chr15 44375731 976 + 99763055 I a score=2551.000000 s hg38.chrUn_KI270749v1 17116 11 + 158759 gtatatatatg s gorGor5.CYUI01005671v1 8175 11 - 24701 gtgtatatata i gorGor5.CYUI01005671v1 I 1 C 0 s ponAbe2.chrUn 66609622 11 - 72422247 gtgtatatata i ponAbe2.chrUn I 19 I 19 e otoGar3.GL873530 132354 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23415688 18 + 169600520 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e calJac3.chr10 24188307 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e macFas5.chr7 24019681 0 + 171882078 C e nomLeu3.chr6 67507308 0 - 121039945 C e panPan2.chr15 44375731 976 + 99763055 I e panTro5.chr1 101799605 0 - 228573443 C a score=3482.000000 s hg38.chrUn_KI270749v1 17127 19 + 158759 tatgg-tatatatatgtatg s panTro5.chr1 101799605 11 - 228573443 ---------atatatatata i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8186 20 - 24701 tatggttatatatatgtatg i gorGor5.CYUI01005671v1 C 0 C 0 s calJac3.chr10 24188307 13 + 132174527 -------atatatatgtgtg i calJac3.chr10 C 0 C 0 e ponAbe2.chrUn 66609633 19 - 72422247 I e otoGar3.GL873530 132354 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23415688 18 + 169600520 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e macFas5.chr7 24019681 0 + 171882078 C e nomLeu3.chr6 67507308 0 - 121039945 C e panPan2.chr15 44375731 976 + 99763055 I a score=1390.000000 s hg38.chrUn_KI270749v1 17146 2 + 158759 gt s panTro5.chr1 101799616 2 - 228573443 gt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8206 2 - 24701 gt i gorGor5.CYUI01005671v1 C 0 C 0 s ponAbe2.chrUn 66609652 2 - 72422247 gt i ponAbe2.chrUn I 19 N 0 s calJac3.chr10 24188320 1 + 132174527 -t i calJac3.chr10 C 0 C 0 e otoGar3.GL873530 132354 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23415688 18 + 169600520 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e macFas5.chr7 24019681 0 + 171882078 C e nomLeu3.chr6 67507308 0 - 121039945 C e panPan2.chr15 44375731 976 + 99763055 I a score=1747.000000 s hg38.chrUn_KI270749v1 17148 49 + 158759 gtata-------------tatatatatgtatg--ataaatatagtatggcatatatatgtatgg s panTro5.chr1 101799618 36 - 228573443 gtata-------------catatatacgtatg-----------gtat---atatata-gtatgg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8208 64 - 24701 atatatatatgtatggtgtatatatatgtatggtatatatatagtatggtatatatatgtatgg i gorGor5.CYUI01005671v1 C 0 C 0 s calJac3.chr10 24188321 19 + 132174527 gtttg-------------tgtgtgtgtgtgtg-------------------------------- i calJac3.chr10 C 0 C 0 e otoGar3.GL873530 132354 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23415688 18 + 169600520 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10582929 923 - 21366645 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e macFas5.chr7 24019681 0 + 171882078 C e nomLeu3.chr6 67507308 0 - 121039945 C e panPan2.chr15 44375731 976 + 99763055 I a score=2909.000000 s hg38.chrUn_KI270749v1 17197 12 + 158759 tgtatatatatg s panTro5.chr1 101799654 11 - 228573443 tgtatatatat- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8272 12 - 24701 tgtatatatatg i gorGor5.CYUI01005671v1 C 0 C 0 s saiBol1.JH378136 10583852 12 - 21366645 tgaatagataaa i saiBol1.JH378136 I 923 C 0 e otoGar3.GL873530 132354 0 + 36342412 C e manLeu1.NW_012108674v1 47395 989 + 2620224 I e macNem1.NW_012010577v1 13263475 1058 - 40200012 I e rheMac8.chr7 23415688 18 + 169600520 I e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e calJac3.chr10 24188340 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e cerAty1.NW_012000887v1 3251327 989 + 7633303 I e macFas5.chr7 24019681 0 + 171882078 C e nomLeu3.chr6 67507308 0 - 121039945 C e panPan2.chr15 44375731 976 + 99763055 I a score=2100.000000 s hg38.chrUn_KI270749v1 17209 1 + 158759 g s gorGor5.CYUI01005671v1 8284 1 - 24701 g i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr7 23415706 1 + 169600520 g i rheMac8.chr7 I 18 C 0 s macNem1.NW_012010577v1 13264533 1 - 40200012 g i macNem1.NW_012010577v1 I 1058 C 0 s cerAty1.NW_012000887v1 3252316 1 + 7633303 g i cerAty1.NW_012000887v1 I 989 C 0 s manLeu1.NW_012108674v1 48384 1 + 2620224 g i manLeu1.NW_012108674v1 I 989 C 0 s saiBol1.JH378136 10583864 1 - 21366645 g i saiBol1.JH378136 C 0 C 0 e otoGar3.GL873530 132354 0 + 36342412 C e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e calJac3.chr10 24188340 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e macFas5.chr7 24019681 0 + 171882078 C e nomLeu3.chr6 67507308 0 - 121039945 C e panPan2.chr15 44375731 976 + 99763055 I e panTro5.chr1 101799665 0 - 228573443 C a score=6937.000000 s hg38.chrUn_KI270749v1 17210 6 + 158759 tatatT- s gorGor5.CYUI01005671v1 8285 6 - 24701 tatata- i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr7 23415707 6 + 169600520 tatatt- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24019681 6 + 171882078 tatatt- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13264534 6 - 40200012 tatatt- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3252317 6 + 7633303 tatatt- i cerAty1.NW_012000887v1 C 0 C 0 s manLeu1.NW_012108674v1 48385 6 + 2620224 tatatt- i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10583865 6 - 21366645 -aaaatg i saiBol1.JH378136 C 0 C 0 e otoGar3.GL873530 132354 0 + 36342412 C e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e calJac3.chr10 24188340 0 + 132174527 C e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e nomLeu3.chr6 67507308 0 - 121039945 C e panPan2.chr15 44375731 976 + 99763055 I e panTro5.chr1 101799665 0 - 228573443 C a score=16879.000000 s hg38.chrUn_KI270749v1 17216 6 + 158759 Tatgtg s gorGor5.CYUI01005671v1 8291 6 - 24701 tatgtg i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67507308 6 - 121039945 tatata i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23415713 6 + 169600520 tatata i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24019687 6 + 171882078 tatata i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13264540 6 - 40200012 tatata i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3252323 6 + 7633303 tatata i cerAty1.NW_012000887v1 C 0 C 0 s manLeu1.NW_012108674v1 48391 6 + 2620224 tatata i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24188340 6 + 132174527 tgtgtg i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10583871 6 - 21366645 tgtgtg i saiBol1.JH378136 C 0 C 0 e otoGar3.GL873530 132354 0 + 36342412 C e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e chlSab2.chr26 21952540 989 - 58131712 I e panPan2.chr15 44375731 976 + 99763055 I e panTro5.chr1 101799665 0 - 228573443 C a score=29260.000000 s hg38.chrUn_KI270749v1 17222 15 + 158759 tatatatacatacac s panTro5.chr1 101799665 10 - 228573443 -----atacacacac i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8297 15 - 24701 tgtatatacatacac i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67507314 15 - 121039945 tatatatatatacac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23415719 15 + 169600520 tatacacacacatat i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24019693 15 + 171882078 tatacacacacatat i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13264546 15 - 40200012 tatacacacacatat i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3252329 13 + 7633303 tat--acacacatat i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21953529 15 - 58131712 tatatatacacacac i chlSab2.chr26 I 989 C 0 s manLeu1.NW_012108674v1 48397 15 + 2620224 tatacacacacatat i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 24188346 13 + 132174527 tgtgtgtgtgtgt-- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10583877 13 - 21366645 tgcttatatatgc-- i saiBol1.JH378136 C 0 C 0 e otoGar3.GL873530 132354 0 + 36342412 C e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e colAng1.NW_012121598v1 2226501 2071 + 10629787 I e panPan2.chr15 44375731 976 + 99763055 I a score=6006.000000 s hg38.chrUn_KI270749v1 17237 1 + 158759 a s panTro5.chr1 101799675 1 - 228573443 a i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8312 1 - 24701 a i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67507329 1 - 121039945 a i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23415734 1 + 169600520 a i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24019708 1 + 171882078 a i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13264561 1 - 40200012 a i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3252342 1 + 7633303 a i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21953544 1 - 58131712 a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 48412 1 + 2620224 a i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2228572 1 + 10629787 a i colAng1.NW_012121598v1 I 2071 C 0 s otoGar3.GL873530 132354 1 + 36342412 a i otoGar3.GL873530 C 0 C 0 e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e canFam3.chr30 13418428 0 + 40214260 C e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10583890 0 - 21366645 C e calJac3.chr10 24188359 0 + 132174527 C e panPan2.chr15 44375731 976 + 99763055 I a score=16332.000000 s hg38.chrUn_KI270749v1 17238 5 + 158759 cacag- s panTro5.chr1 101799676 4 - 228573443 caca-- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 8313 4 - 24701 caca-- i gorGor5.CYUI01005671v1 C 0 I 1 s nomLeu3.chr6 67507330 4 - 121039945 taca-- i nomLeu3.chr6 C 0 I 1 s rheMac8.chr7 23415735 4 + 169600520 caca-- i rheMac8.chr7 C 0 I 1 s macFas5.chr7 24019709 4 + 171882078 caca-- i macFas5.chr7 C 0 I 1 s macNem1.NW_012010577v1 13264562 4 - 40200012 caca-- i macNem1.NW_012010577v1 C 0 I 1 s cerAty1.NW_012000887v1 3252343 4 + 7633303 caca-- i cerAty1.NW_012000887v1 C 0 I 1 s chlSab2.chr26 21953545 4 - 58131712 caca-- i chlSab2.chr26 C 0 I 1 s manLeu1.NW_012108674v1 48413 4 + 2620224 caca-- i manLeu1.NW_012108674v1 C 0 I 1 s colAng1.NW_012121598v1 2228573 4 + 10629787 caca-- i colAng1.NW_012121598v1 C 0 I 1 s otoGar3.GL873530 132355 4 + 36342412 caca-- i otoGar3.GL873530 C 0 I 1 s canFam3.chr30 13418428 5 + 40214260 cata-c i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e cebCap1.NW_016107324v1 3733116 1585 - 13033340 I e dasNov3.JH579377 1806372 1362 - 2868945 I e saiBol1.JH378136 10583890 0 - 21366645 C e calJac3.chr10 24188359 0 + 132174527 C e panPan2.chr15 44375731 976 + 99763055 I a score=7181783.000000 s hg38.chrUn_KI270749v1 17243 770 + 158759 aatggaatattagtaagccttcaaaaggaaaattctgtcttat--ttcaacatgtatcaatcttaaggatattgtgctaagtgaaataagccagacacaaacacaaatatatcgtgattccatttatatgatgtattgaaagtagccaaacacatggaaacacaagataaaatggtagttgtcagggcctgg-aggaaacaggaaatctggagttgctgttcaccaggtgtagagtttcagtcaagcaagat-aaaaacattctagatttctgctgtacaacaatgtgtatatcattaacaa-aatgttctgcaaacttaaaattttgttaagatggtaga-tttttttgttatgtg-----ttttt----TAATTacaaaaatttctgtc-tgtatttagtttacattttagtaaggaaagacaaataagctaataaatggtaatgataaatgctgtaaggatatctagagcaataaaagaagttatggatatgggagtataattttagatagtgaagatttctgtattcaaatgccacatggaaaaaggac-taaggggaatgaggagatgagtcatatggaatgcccaagacacagaaaaaggcaggcagagaaaataacaaggataaagacactgaagtaaaatcatgctttctatatttcaaaacagcagcaagtacactactgtgatagagcaggagtgaccaat-gggaggctggagattttgtcagagatattgtcaaggctcaggatcgtacagggacttgtaagcctggaaagcactt s panTro5.chr1 101799680 769 - 228573443 -atggaatattattcagcctttaaaagggaaattctgtcatat--ttcaacatgtatcaatcttaaggatattttgctaagtgaaataagccagacacaaagacaaatatatcttgattccatttatatgaggtattgaaagtagccaaacacatggaaacagaagataaaatggtagttttcagggtctgg-aggaaacaggaaatctggagttgctgttcaccaggtgtggagtttcagtcaagcaagat-aaaaacattctagatttcacctgtacaacaatgtgtatatcattaacaa-aatgttctgcaaacttaaaattttgttaacatggtaga-tttttttgttatgtg-----ttttt----TAATTacaaaaatttctatc-tgtatttagtttacattttagtaaggaaagacaaataagctaataaatggtaatgataaatgctgtaaggatatctagagcaataaaagaagttatggatatgggagtataattttagatagtgaagatttctgtattcaaatgccacatggaaaaaggac-taaggggaatgaagagatgagtcatatgtaatgccaaagacacagaagaaggcaggcagagaaaataacaaggataaagacaatgaagtaaaatcatgctttctatatttcaaaacaacagcaaggacactagtgtgacagagcaggagtgaccaat-gggaggctggagattttgtcagagatattgtcaaggctcaggatcgtacagggacttgtaagcctggaaagcactt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44376707 769 + 99763055 aatggaatattattcagccttcaaaagggaaattctgtcatat--ttcaacatatatcaatcttaaggatattgtgctaagtgaaataagccagacacaaagacaaatatctcgtgattccatttatatgaggtattgaaagtagccaaacacatggaaacagaagataaaatggtagttgtcagggcctgg-agaaaacaggaaatctggagttgctgttcaccaggtatggagtttcagtcaagcaagat-aaaaacattctagatttctgctgtacaacaatatgtatatcattaacaa-aatgttctgcaaacttaaatttttgttaagatggtaga--ttttttgttatgtg-----ttttt----TAATTacaaaaatttctgtc-tgtatttagtttacattttagtaaggaaagacaaataagctgataaatggtaatgataaatgctgtaaggatatgtagagcaataaaagaagttatggatatgggagtataattttagatagtgaatatttctatattaaaatgccacatggaaaaaggac-taaggggaatgaggagatgagtcatatggaatgcccaagacacagaacaaggcaggcagagaaagtaacaaggataaagacactgaaatgaaatcatgcttgctatatttcaaaacaacagcaaggacactagtgtgacagagcaggagtgaccaat-gggaggttggagattttgtcagagatagagtcaaggctcaggatcgtacagggacttgtaagcctggaaagcactt i panPan2.chr15 I 976 C 0 s gorGor5.CYUI01005671v1 8318 725 - 24701 aatggaatattattcagccttcaaaagggcaattctgtcgtat--ttcaacttgtatcaatcttaaggatattgtgctaagtgaaataagccagacacaaagacaaatatatcgtgattccatttatatgaggtattgaaagtagccaaacacatggaaaca-aagataaaatggtagttgtcagggcctgg-aggaaacaggaaatctggagttgctgtttaccaggtgtagagtttcagtcaagcaagat-aaaaacattctagatttctgctgtacaacaatgtgtatatcattaacaa-aatgttctgcaaacttaaaattttgttaagatcgtagattttTTTTGTTATGTG-----TTTTT----TAATTacaaaaatttctgtc-tgtatttagtttacattttagtaaggaaagacaaataagctaataaatggtaatgataaatgctgtaaggatatctagagcaataaaagaagttatggatatgggagtataattttagacagtgaagatttctgtattcaaatgccacatgcaaaaaggac-taaggggaatgaggagatgagtcatatggaatgcccaagacacagaagaaggcaggcag---------------------------------------------atatttcaaaacaacagcaaggacactagtgtgacagagcaggagtgaccaat-gggaggctggagattttgtcagagatattgtcaaggctcaggatcgtacagggacttgtaagcctggaaagcactt i gorGor5.CYUI01005671v1 I 1 C 0 s nomLeu3.chr6 67507335 769 - 121039945 aatggaatattattcagccttcaaaagggaaattctgtcatat--ctcaacatatatcaatcttaaggatattgtgctaagtgaaataagccacacacaaagacaaatatctagtgattccatttatatgaggtattgaaagtagccaaacacatggaaacagaagataaaacggtagttatcagggcctgg-aggaaacagaaaatctggagttgctgttcactaggtatggagtctcagtcaagcaagat-aaaaacattctagatttctgctgtacaacaatgtgtatatcattaacaa-aatgttctgcaaacttaaaattttgttaagatggtaga--ttttttgttatgtg-----ttttt----TAATTacaaaaatttctgtc-tgtatttagtttacattttagtaaggaaatacaaataagctgataaatggtaatgataaatgctgtaaggatatgtagagcaataaaagaagttatggatatgggagaataattttagatagtgaagatttctatattaaaatgccacatggaaaaaggac-taaggggaatgaggagatgagtcatatggaatgcccaagacacagaacaaggcaggcagagaaattaacaaggaaaaagacactgaagtgaaatcatgcttgctatatttcaaaacaacagcaaggacactagtgtgacagagcaggagtgaccaat-gggaggttggagattttgtcagagatatagtcaaggctcaggatcgtacagggacttgtaagcctggaaagcactt i nomLeu3.chr6 I 1 C 0 s rheMac8.chr7 23415740 760 + 169600520 aatggaatattattcagccttcaaaagggaaattctgtcatat--ttcaacatgtatcaatcttaaggatattgtgctaagtgaaataagccagacacaaaaacaaatatctcgtgattccatttatatgaggtattgaaagtagccaaacacgtggaaacagaagataaaatggtagtcgtcagggcctgg-aggaaacaggaaatctggagttgctgttcaccaggtatggagtttcagtcaagcaagat-aaaaacattctagattgctgctgtacaacaatgtgtatatcattaacaa-aatgttctgcaaacttaacattttgttaagatgg-aga--ttttttgttatat------atttt----taattacaaAAATTTCTGTC---TGTTTagtttacattttagtaaggaaagacaaataagct----aatggtagtgataaatgctttaaggacatctagagcaataaaagaagttatggatatgggagtataattttagatagtgaagatttctgtattaaaatgccacatggaaaaaggac-taaggggaatgaggagatcagtcgtatggaatttccaagacacagaacaaggcaggcagagaaaataacaaggataaagatattgaagtgaaatcatgc-tgctttatttcaaaacaacagcaaggacactcgtgtgacagagcgggagtgagcaat-gggaggttggagattttgtcagagatacagtcaaggctcaggatcatacagggacttgtaagcctgaaacgcactt i rheMac8.chr7 I 1 C 0 s macFas5.chr7 24019714 760 + 171882078 aatggaatattattcagccttcaaaagggaaattctgtcatat--ttcaacatgtatcaatcttaaggatattgtgctaagtgaaataagccagacacaaaaacaaatatctcgtgattccatttatatgaggtattgaaagtagccaaacacgtggaaacagaagataaaatggtagtcgtcagggcctgg-aggaaacaggaaatctggagttgctgttcaccaggtatggagtttcagtcaagcaagat-aaaaacattctagattgctgctgtacaacaatgtgtatatcattaacaa-aatgttctgcaaacttaacattttgttaagatgg-aga--ttttttgttatat------atttt----taATTacaaaaatttctgtc---tgtttagtttacattttagtaaggaaagacaaataagct----aatggtagtgataaatgctttaaggacatctagagcaataaaagaagttatggatatgggagtataattttagatagtgaagatttctgtattaaaatgccacatggaaaaaggac-taaggggaatgaggagatcagtcgtatggaatttccaagacacagaacaaggcaggcagagaaaataacaaggataaagatattgaagtgaaatcatgc-tgctttatttcaaaacaacagcaaggacactcgtgtgacagagcaggagtgagcaat-gggaggttggagattttgtcagagatacagtcaaggctcaggatcatacagggacttgtaagcctgaaacgcactt i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 13264567 760 - 40200012 aatggaatattattcagccttcaaaagggaaattctgtcatat--ttcaacatgtatcaatcataaggatattgtgttaagtgaaataagccagacacaaaaacaaatatctcgtgattccatttatatgaggtattgaaagtagccaaacacgtggaaacagaagataaaatggtagtcgtcagggcctgg-aggaaacaggaaatctggagttgctgttcaccaggtatggagtttcagtcaagcaagat-aaaaacattctagattgctgctgtacaacaatgtgtatatcattaacaa-aatgttctgcaaacttaacattttgttaagatgg-aga--ttttttgttatat------atttt----taattacaaAAATTTCTGTC---TGTTTagtttacattttagtaaggaaagacaaataagct----aatggtagtgataaatgctttaaggacatctagagcaataaaagaagttatggatatgggagtataattttagatagtgaagatttctgtattaaaatgccacatggaaaaaggac-taaggggaatgaggagatcagtcgtatggaatttccaagacacagaacaaggcaggcagagaaaataacaaggataaagatattgaagtgaaatcatgc-tgctttatttcaaaacaacagcaaggacactcgtgtgacagagcaggagtgagcaat-gggaggttggagattttgtcagagatacagtcaaggctcaggatcatacagggacttgtaagcctgaaacgcactt i macNem1.NW_012010577v1 I 1 C 0 s cerAty1.NW_012000887v1 3252348 760 + 7633303 aatggaatattattcagccttcaaaagggaaattctgtcatat--ttcaacatgtatcaatcttaaggatattgtgctaagtgaaataagccagacacaaaaacaaatatctcgtgattccatttatatgaggtatagaaagtagccaaacacgtggaaacagaagataaaatggtagtcgtcagggcctgg-aggaaacaggaaatctggagttgctgttcaccaggtatggagtttcagtcaagcaagat-aaaaacattctagattgctgctgtacaacaatgtgtatatcattaacaa-aatgttctgcaaacttaacattttgttaagatgg-aga--ttttttgttatat------atttt----taattacaaAAATTTCTGTC---TGTTTagtttacattttagtaaggaaagacaaataagct----aatggtagtgataaatgctttaaggacatctagagcaataaaagaagttatggatatgggagtataattttagatagtgaagatttctgcattaaaatgccacatggaaaaaggac-taaggggaatgaggagatcagttgtatggaatttccaagacacagaacaaggcaggcagagaaaataacaaggataaagatattgaagtgaaatcatgc-tgctttatttcaaaacaacagcaaggacactcgtgtgacagagcaggagtgagcaat-gggaggttggagattttgtcagagatacagtcaaggctcaggatcatacagggacttgttagcctgaaacgcactt i cerAty1.NW_012000887v1 I 1 C 0 s chlSab2.chr26 21953550 760 - 58131712 aatggaatattattcagccttctaaagggaaattctgtcatat--ttcaacatgtatcaatcttaaggttattgtgctaagtgaaataagccagacacaaaaacaaatatctcctgattccatttatatgaggtattgaaagtagccaaacacatggaaacagaagataaaatggcagttgtcagggcctgg-aggaaacaggaaatctggagttgctgttcaccaggtatggagtttcagtcaagcaagat-aaaagcattctagattgctgctgtacaacaatgtgtatatcattaacaa-aatgttctgcaaacttaacattttgttaagatgg-aga--ttttttgttatat------atttt----taATTacaaaaatttctgtc---tgtttagtttacattttagtaaggaaagacaaataagct----aatgctagtgataaatgctttaaggacatctagagcaataaaagaggttatggatatgggagtataattttagatagtgaagatttctgtattaaaatgccacatggaaaaaggac-taaggggaatgaggagatcagtcgtatggaatttccaagacacagaacaaggcaggcagagaaaataacaagaataaaaacattgaagtgaaatcatgc-tgctttatttcaaaacaacagcaaggacactcgtgtgacagagcaggagtgagcaat-gggaggttggagattttgtcagagatatagtcaaggctcaggatcatacagggacttgtaagcctggaacgcactt i chlSab2.chr26 I 1 C 0 s manLeu1.NW_012108674v1 48418 760 + 2620224 aatggaatattattcagccttcaaaagggaaattctgtcatat--ttcaacatgtatcaatcttaaggatattgtgctaagtgaaataagccagacacaaaaacaaatatctcgtgattccatttatgtgaggtattgaaagtagccaaacacgtggaaacagaagataaaatggtagtcgtcagggcctgg-aggaaacaggaaatctggagttgctgttcaccaggtatggagtttcagtcaagcaagat-aaaaacattctagattgctgctgtacaacaatgtgtatatcattaacaa-aatgttctgcaaacttaacattttgttaagatgg-aga--ttttttgttatat------atttt----taattacaaAAATTTCTGTC---TGTTTagtttacattttagtaaggaaagacaaataagct----aatggtagtgataaatgctttaaggacatctagagcaataaaagaagttatggatatgggagtataattttagatagtgaagatttctgtattaaaatgccacatggaaaaaggac-taaggggaatgaggagatcagtcgtatggaatttccaagacacagaacaaggcaggcagagaaaataacaaggataaagatattgaagtgaaatcatgc-tgctttatttcaaaacaacagcaaggacactcgtgtgacagagcaggagtgagcaat-gggaggttggagattttgtcagagatacagtcaaggctcaggatcatacagggacttgtaagtctgaaacgcactt i manLeu1.NW_012108674v1 I 1 C 0 s colAng1.NW_012121598v1 2228578 766 + 10629787 aatggaatattattcagccttcaaaagggaaattctgtcacat--ttcaacatgtatcaatcttaaggatattgtgctaagtgaaataagccagacacaagaacaaatatcttgtgattccatttatatgaggtattgaaagtagccacacacatgggaacagaagataaaatggtagtcatcagggcctgg-aggaaacaggaaatctggagttgctgttcaccaggtatggagtttcagtcaagcaagat-aaaaacattctagatttctgctgtacaataatgtgtatatcattaacaa-aatgttctgcaaacttaaaattttgttaagatgg-aga--ttttttgttatgtg-----atttt----taATTACAAAAATTTCTGCC-TGTGTTTAGTTTACATTTTAGTAAGGAAAGACAAATAAGCTAATAAATggtagtgataaatgctttaaggacatctagagcaataaaa-acgttatggatatgggagtataattttagatagtgaagatttttgtattaaaatgccacatggaaaaaggac-tacggggaatgaggagatcagtcatatggaatttccaagacacagaacaaggcaggcggagaaaataacaaggataaagacattgaagtgaaatcttgc-tgctttatttcaaaacaacagcaaagacactagtgtgacagagcaggagtgagcaat-gggaggttggagattttgtcagagatatagtcaaggcccaggatcatacagggacttgtaagcctggaacgcactt i colAng1.NW_012121598v1 I 1 C 0 s calJac3.chr10 24188359 731 + 132174527 gatggaatattattcagccttcaatagggaaattctgtcatat--tccaacatgtatcaatcttaaggatattgtgctaagtgaaataagccagtaacaaaaacaaatatttcatgattccatttatatggggtattgaaagtagccaaacacatggaaacagaagataaaatggtagttgccagggcctgg-gggaaagag------------------------ggtatagagtttcagacaagcaagat-aaaaacattctagattgctgctgtacaacaatgtg--tatcattaacaa-actgttctgcacacgtgacattttgttaagatggtaga--ttttgtgttacgtg-----ttttt----TAATGACAAAAATTTCTGTC-TGTATAAAA---ACATTTTAGTAAGGAAAGACAAGTAAATTAATaaatggtaaggataaatgctgtaaggatatctggagcaataaaaagagt------tatgggagtataattttagttagtgaaggtttctgtatt-aaatatcacacggaaaaaggac-taagggggatgaggagatgagtcatatggaatgcccaagacacaaaacaaggcaggcagagaaaataacaagggtaaagaccctgaagtgaaatcatgcttgctataattcaaaacaacagtaaggacactagtgtgacagagcaggagtgagaaat-aggaggttggagattttgtcagag--atagtcaaggctcaggatcatacagggacttgtaaccctagcaaacgctt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10583890 737 - 21366645 aatggaatattattcagccttcgaaagggaaattctgtcatat--tccaacatgtatcgatcttaaggatattgtgctaagtgaaataagccagtgacaaagacaaatatttcatgattccatttatatgaggtattgaaagtagccaaacacatggaaacagaagataaaatggtagttgtcagggcctgg-aggaaagaa------------------------ggtatagagtttcagtcaagcaagataaaaaaaattctagattgctgctgtacaacaatgtg--tatcattaacaa-actgttctgcacacttgaaattttgttaagatggtaga--ttttgtgttatgtg-----ttttt----TAATgacaaaaatttctgta-tgtatttagcttatattttagtaaggaaagacaagtaaactaataaatggtaaggataaatgctgtaaggatatctggagcaataaaaggagt------tatgggagtataattttagatagtgaagacttctgtatt-aaatatcacatggaaaaaggac-taaggggaatgaggagatgagtcatatggaatgcccaagacacagaaaaaggcaggcagagaaaataataaggataaagaccctgaagtgaaatcatgcttgctgtatttcaaaacaacagtaaggacactagtgtgacagagcaggagtgagaaat-aggaggttggagattttgtcagagaaacagtcaaggctcaggatcatacagggacttgtaaccctagcaaacactt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3734701 733 - 13033340 aatggaatattattcagccttcaaaagggaaat--tgtcatat--tccaacatgtatcaatcttaaggatattgtgctaagtgaaataagccagtaacaaagacaaatatttcatgattccatttatatgaggtattgaaagtagccaaacacatggaaacagaagataaaatggtagttgccagggcgtgg-aggaaagag------------------------ggtatagagtttcagtcaagcaagat-aaaaacattctagattgctgctgtgcaacaatgtg--tatcattaacaa-actgttttgcacacttgaaattttgttacgatggtaga--ttttgtgttatgtg-----ttttt----taataacaaaaatttctgtc-tgtacttagcttacattttagtaaggaaagacaagt-aactaataaatggtaaggataaatgctgtaaggatatctggagcaataaaaggagt------tataggagtataattttagacagtgaaggtttctgtatt-aaatatcacatggaaaaaggac-taaggggaatgaggagatgagtcatatggaatgtccaagatacagaaaaaggcaggcagagaaaataataaggataaagaccctgaagtgaaatcatgcttgctatatttcaaaacaacagtaaggacactagtgtgacagagcaggagtgagaaat-aggaggttggagattttgtcagagatacagtcaaggctcaggatcttacagggacttgtaaccctagcaaacactt i cebCap1.NW_016107324v1 I 1585 C 0 s otoGar3.GL873530 132360 731 + 36342412 aatggaatgttattctgccttgaaaaaggaaattgtgtcatatgctccaacatgtatgaatcttaagg--attaggcccagtgaagtaaaccagtcacaaggacaaatctgtcacgatcccagttatatgaggtaccaaaagtagtcaaactcatagaagcagaaagcaaaat-gtagttgccagggcccag-agggaagagaaaatgggaagttgatgtttaatgggtatagagtttcaatttagcaagat-gaaaaagttctcaatttctggtgtacaataatgtgtagataattgacac-actgttctgtacacttaaaattt--ttaagagggtaga--attcatattaagtgGGGTTATTTT----TAATTGCAAAACTATTTGGTGTGGCTTTagcttacactgtagtgggttacaacaaataaactaataaatcatagtaataagtactgtaagaatatctagagcaatagaagacatca----tatatgagaataaatgtagatagtgatgattaatgcactcaaatgtcacatgggcaaagagc-tgc-aggaatgagggg--gaatcatgtgg-acacccaaggcttagagcaaagcagagggagaaagtaggaaggataaag-------tgtggaa---tgcttgca--gtttcaaaacaacagcaaggacactagtgtgacagagta---------------gaggtcgcaggtttcatcagagatgtag-------acaggttcctgcagaggctggtaggcttagcaagaatgt i otoGar3.GL873530 I 1 C 0 s canFam3.chr30 13418433 695 + 40214260 aatgaaaaattattcagacttaggaaaggaaat--------at--tttta----------------------tgtgcta---------------------------------catgattcaacttacaagaaatatctaaattagtcaaactcatagacacaaagagtaaaatgttgtttgccaggggctggcaggagagagaaa---------tgttgttcaatggttacagagtttcaattaag-aagat-aaataagttctagagatctactgtacaacaacatgcatatagttgacaataatgtcatttacacttaa-ataattttaagagggtaga--tttcatgctgtgt------ttcttaccataataaaaaaaaaatctgtc-catattgagcttatattttagtgggaaaagatgaagtagta----aataatagtgacaaatgctgcaaggatgttaggagcaagagaagaaactaaggatatgt--gtgcaagtttagtgagtaaatatttctgtgttaaactggcatatgagcaaagaacttgagggcagtaaggaagtaagccatgtggaacgcccaaggcatccagcaaggcatgcagagaaaacagcaaggataaagaccctgaattggaatcatgcttcacttatttcaaaacaacagcaatgacaccagagtgactga-caggagtgagcaatggggaggttgaagattttttcagagaggcagttgagggacaggatcctgtacaggcttgtaagcttggcaagaactt i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I e dasNov3.JH579377 1806372 1362 - 2868945 I a score=1128972.000000 s hg38.chrUn_KI270749v1 18013 104 + 158759 tgaattttattcagaatgagatgagaagccattga---------aaagtttttaagcagatgcgtaaaataatccaccttgtattttaagaggagcattctaccttctctgtg s panTro5.chr1 101800449 104 - 228573443 tgaattttattcagaatgagatgagaagccattga---------aaagtttttaagcagatgagtaaaataatccacctggtattttaagaggagcattctaccttctctgtg i panTro5.chr1 C 0 C 0 s panPan2.chr15 44377476 104 + 99763055 tcaattttattcagaatgagatgagaagccattga---------aaagtttttaagcagatgagtaaaataatccaccttgtattttaagaggaacgttctacctgctctgtg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 9043 104 - 24701 tgaattttattcagaatgagatgagaagccattga---------aaagtttttaagcagatgagtaaaataatccaccttgtattttaagaggagcattctaccttctctgtg i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67508104 104 - 121039945 tgaattttattcagaatgagatgagaagccattga---------aaagtttttaagcagatgagtaaaataatccaccttgtattttaagaggaacattctacctgctctgtg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23416500 104 + 169600520 tgaattttattcagaatgagatgagaagccattga---------aaaatttttaagcagatgagtaaaataattcaccttgtattttaagaggaacactctacctgctctgtg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24020474 104 + 171882078 tgaattttattcagaatgagatgagaagccattga---------aaaatttttaagcagatgagtaaaataattcaccttgtattttaagaggaacactctacctgctctgtg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13265327 104 - 40200012 tgaattttattcagaatgagatgagaagccattga---------aaagtttttaagcagatgagtaaaataattcaccttgtattttaagaggaacactctacctgctccgtg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3253108 104 + 7633303 tgaattttattcagaatgagatgagaagccattga---------aaagtttttaagcagatgagtaaaataatccaccttgtattttaagaggaacactctacctgctctgtg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21954310 104 - 58131712 tgaattttattcagaatgagatgagaggccattga---------aaagtttttaagcagatgagtaaaataatccaccttgtattttaagaggaacactctacctgctctgtg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 49178 104 + 2620224 tgaattttattcagaatgagatgagaagccattga---------aaagtttttaagcagatgagtaaaataatccacctggtattttaagaggaacactctacctgctctgtg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2229344 104 + 10629787 tgaattttattcagaatgagatgagaagccattga---------aaagtttttaagcagacgagtaaaataatccgccttgtattttaagaggaacactctacctgctctgtg i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24189090 104 + 132174527 tcagttttattcggaatgagatgagaatccattga---------aaagttttcaagcagatgagtaaaataatccaccttacattttaagaggaccacactgtctgctctgtg i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10584627 104 - 21366645 tcaattttattcagaatgagatgagaagccattga---------aaagtttttaagcagatgagtaaaataatccaccttatattttaagaggaccactctgcctgctctgtg i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3735434 104 - 13033340 tcaattttattcagaatgagatgagaagccattga---------aaagtttttaagcagatgagtaaaataatccaccttatattttaagaggaccactctgtccgctctgtg i cebCap1.NW_016107324v1 C 0 C 0 s otoGar3.GL873530 133091 82 + 36342412 tgaactgtattcagaatgagatgggaagccagtga---------aatggtttta---agatgagtg-------------------ctaggaattatattttaccagctctgtg i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13419128 113 + 40214260 tgaattttaatctggataggataggaagccactgatagcagaacaatgtgtttcagcagaagagtcaaattatctgctttatatttcaacaaggtcactgtacctactctacg i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1807734 94 - 2868945 tgaactatataca-------atgagtagtcattga---------aagggttttaagcagaagagtgaaatgatctgcctcatactttaaga---ccactctccctgttctatg i dasNov3.JH579377 I 1362 C 0 e aotNan1.NW_018501505v1 5225825 1464 + 11604778 I a score=7602352.000000 s hg38.chrUn_KI270749v1 18117 660 + 158759 gaatagaga-ggtggaaggg-aaagcttgaagcagagagaacagtgaagagtgtactgtaatattcttatgtgagaaatagtggagggaatgagaggtggtC---AGCCTTAAACTGCCATTTGCTCTCTGT--ATCAGGGCTCAGGGActttcagactctccagggattccttacagtttttacattcgtttctcagttgcaaacataatctcttcactc-tatgagaactctagatctgaatccttgtta-tgagtcaggagtcctctctagtttactctcttgtcagtaactagaCTTGAAATGTTTTGATATTAATTGATATAGTAATA-AGATTGGTTAGAGAAATAGCAAAGAGAGAGCATCCCCATCCTATGACCATATcagcaccagaaga---g-aaaaacacatctacacagtttttcccttggcataggtcttggtattct--gttagggaacaggttatgaaggaaatac-aaagggtctttgtacttactttcagaatgtattttcttt-----aacatgaaaagaatccaaggcctttttgcttctaattg---ct----ttttgtg------tatctactaccatcccttgctaaattattgataggtttcctcaaatctcggcatga---tgt---cctacattctaaa-ttttcaatagctgaaa---atttcaccttttcagtgcct s panTro5.chr1 101800553 661 - 228573443 gaatagaga-ggtggaagggcaaggcttgaagcagagagagcagtgaagaatgtactgtaatattcttatgtgagaaatagtggagggaatgagaggtggtC---AACCTTAAACTGCCATTTGCTGTCTGT--ATCAGGGCTCAGGGActttcagactctccagggattccttacagtttttacgtttgtttctcAGTTGCAAACATAACCTCTTCACTC-CATGAGAACTCTAGATCTGAATCCTTGTTA-TGAGTCAGGAGTCCACTCTAGTTTACTCTCTTGTCAGTAACTACGCTTGAAATGTTTTGATATTAATTGATGTAGTAATA-AGATTAGTTAGAGAAATAGCAAAGAGTGAGCATCCACATCTTATGACCATATCGGCACCAGAAGA---G-AAAAACACATCTACACAGTTTTTCCCTTGGCATAGGCCCTGGTATTCT--GTTAGGGAACAGGTTATAAAGGAAATAC-AAAGGGTCTTTGTACTTACTTTCAGAATGTATTTTCTTT-----AACATGAAAAGAATCCAAGGCCTTTTTGTTTCTAATCG---CT----TTTTGTG------TATCTACTACCATCCCTTGCTAAATTATTGATACGTTTCCTTAAATCTCGGCATGA---TGT---CCTACATTCCAAA-TTTTCAATAGCTGAAA---ATTTCACCTTTTCAGTGCCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44377580 655 + 99763055 gaatagaaa-ggtggaagggcaaagcttgaaacagag----cagtgaagagtgtactgtaata---ttatgtgagaaacagtggagggaatgagaggtggtC---AGCCTTAAACTGCCATTTGCTCTCTGT--ATCAGGGCTCAGGGACTTTCAGACTCTCCAGGGATTCCTTATAGTTTTTACATTTGTTTCTCAGTTGCAAACATAATCTCTTCACTC-TATCAGAACTCTAGATCTGAATCCTTGTTA-TGAGTCAGGAGTGCACCCTAGTTTACCCTCTTGTCAGTAACTAGACTTGAAATGTTTTGATATTAATTGATATAGTAATA-AGATTGGTTAGAGAAATAGCAAAGAGAGAGCATCCCCATCCTATGACCATATCAGCACGAGAAGA---G-AAAAACACATCTACAGAGTTTTTCCATTGGCATAGGCCCTGGTATTCT--GTTACGGAACAGGTTATAAAGGAAATAC-AAAGCGTCTTTGTACTTACTTTCAGAATGTATTTTCTTT-----ATCATGAAAAGAATCCAAGGCTTTTTTGTTTCTAATTG---CT----TCTTGTG------TATCTACTACCATCCCTTGCTAAATTATTGATATGTTTCCTCAAATCTCAGCATGA---TGT---CCTGCATTCCAAATTTTTCAATAGCTGAAA---ATTTCACCTTTTCAGTGCCT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 9147 660 - 24701 gaatagaga-ggtggaaggg-aaagcttgaagcagagagagcagtgaagagtgtactgtaatattcttatgtgagaaatagtggagggaatgagaggtggtA---AGCCTTAAACTGCCATTTGCTCTCTGT--ATCAGGGATCAGGGACTTTCAGACTCTCCAGGGATTCCTTACAGTTTTTACATTCGTTTCTCATTTGCACACATAATCTCTTCACTC-TATGAGAACTCTAGATCTGAATCCTTGTTA-TGAGTCAGGAGTCCACTCTAGTTTACTCTCTTGTCAGTAACTAGACTTGAAATGTTTTGATATTAATTGATATAGTAATA-AGATTAGTTAGAGAAATAGCAAAGAGAGAGCATCCCCATCCTATGACCGTATCAGCACCAGAAGA---G-AAAAACACATctacacagtttttcccttggcataggccctggtattct--gttagggaacaggttatgaaggaaatac-aaagggtctttgtacttactttcagaatgtattttcttt-----aacatgaaaagaatccaaggcttttttgcttctaattg---ct----ttttgtg------tatctactaccatccgttgctaaattattgataggtttcctcaaatctcggcatga---tgt---cctacattccaaa-ttttcaatagctgaaa---atttcaccttttcagtgcct i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67508208 654 - 121039945 gaatagaga-ggtggaagggcaaagcatgaaacagagagagcagtgaagagtgtactgtaatattctcatgcgagaaatagtggaggGAATGAGAGGTGCTCTCTATATCAGGGCTGCCATTTGCTCTCTAT--ATCAGGGCTCAGGGActttcagactctccagtgattccttacagtttttatatttgtttctcagttgcaaacataatctcttcactc-tatgagaactctagatctgaaaacttgtta-tgagtcaggagtccagtctagtttactctcttgtcagtaactagaCTTGAAATGTTTTGATATTAATTGACATAGTAATA-AGATTGGTTAGAGAAATAGCGAAGAGAGAGCGTCACTGTCCTATGACCACATcagcaccagaaga---g-aaaaatacatctacacagtttttccattggcataggccctggtattct--gttagggaacaggttataaaggaaatac-aaagggtctttgtacttactttcagaatgtattttcttt-----atcatgaaAAGAATCCAAGGCCTTTTTGCTTCTAATTG---CT----TCTTGTG------T----------ATCCCTTGCTAAATTATTGATACGTTTCCTCAAATCTCGGCAGGG---TGT---CCTACATTCCAAA-TTTTCAATAGCTGAAA---ATTTCACCTTTTCAGTGACT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23416604 653 + 169600520 caatagaga-ggtggaagggcaaagcttgaagcagagagagcagtgaagggtgtattgtaatattcttatgcaaggactagtggagggaatgagagatggtC---AGCCTTAAACTGCCATTTGCCCTCTAT--ATCAGGGCTCAGGGActttcagactctccagggattccttacagtttttacacttgtttctcagttgcaaacataatctcttcactc-tgtgagaactctagatctgaatccttgtta-tgagtcaggagttcactctagtttactctcttgtcagtaactagaCTTGAAATGTTTTGATATTAATTGATATAGTAATA-AGATTGGTTAGAGAAATAGTGAAGAGACAGCATCCCCATCCTATGACCATATCAGCACCAGAAGA---G-AAAAACACATCTACACAGTTTTTCCATTGGCATAGGCCCTGGTATTCT--GTTAGGGAACAGGTGATAAAGGAAATAC-AAAGGGTCTTTGTACTTACTTTCAGAATGTATTTTCTTT-----ATCATGAAAAGAATCCCAGGACATTTTGCTTCTAATTG---CT----TCTTGTG------TATCTACTATCATCCCTTGCTAAATTATTGA--------CTCAAATCTCGGCGTGA---TGT---CCTACATTCCAAA-TTTTCAATAGCTGAAA---TTTTCACCGTTTCAGTGCCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24020578 653 + 171882078 caatagaga-ggtggaagggcaaagcttgaagcagagagagcagtgaagggtgtattgtaatattcttatgcaaggactagtggaggGAATGAGAGATGGTC---AGCCTTAAACTGCCATTTGCCCTCTAT--ATCAGGGCTCAGGGACTTTCAGACTCTCCAGGGATTCCTTACAGTTTTTACACTTGTTTCTCAGTTGCAAACATAATCTCTTCACTC-TGTGAGAACTCTAGATCTGAATCCTTGTTA-TGAGTCAGGAGTTCACTCTAGTTTACTCTCTTGTCAGTAACTAGACTTGAAATGTTTTGATATTAATTGATATAGTAATA-AGATTGGTTAGAGAAATAGTGAAGAGACAGCATCCCCATCCTGTGACCATATcagcaccagaaga---g-aaaaacacatctacacagtttttccattggcataggccctggtattct--gttagggaacaggtgataaaggaaatac-aaagggtctttgtacttactttcagaatgtattttcttt-----atcatgaaaagaatcccaggacattttgcttctaattg---ct----tcttgtg------tatctactatcatcccttgctaaattattga--------ctcaaatctcggcgtga---tgt---cctacattccaaa-ttttcaatagctgaaa---ttttcaccgtttcagtgcct i macFas5.chr7 C 0 I 1 s macNem1.NW_012010577v1 13265431 653 - 40200012 caatagaga-ggtggaagggcaaagcttgaagcagagagagcagtgaagggtgtattgtaatattcttatgcaaggactagtggagggaatgagagatggtC---AGCCTTAAACTGCCATTTGCCCTCTAT--ATCAGGGCTCAGGGActttcagactctccagggattccttacagtttttacacttgtttctcagttgcaaacataatctcttcactc-tgtgagaactctagatctgaatccttgtta-tgagtcaggagttcactctagtttactctcttgtcagtaactagaCTTGAAATGTTTTGATATTAATTGATATAGTAATA-AGATTGGTTAGAGAAATAGTGAAGAGACAGCATCCCCATCCTATGACCATATCAGCACCAGAAGA---G-AAAAACACATCTACACAGTTTTTCCATTGGCATAGGCCCTGGTATTCT--GTTAGGGAACAGGTGATAAAGGAAATAC-AAAGGGTCTTTGTACTTACTTTCAGAATGTATTTTCTTT-----ATCATGAAAAGAATCCCAGGACATTTTGCTTCTAATTG---CT----TCTTGTG------TATCTACTATCATCCCTTGCTAAATTATTGA--------CTCAAATCTCGGCGTGA---TGT---CCTACATTCCAAA-TTTTCAATAGCTGAAA---TTTTCACCGTTTCAGTGCCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3253212 661 + 7633303 caatagaga-ggtggaagggcaaagcttgaagcagagagagcagtgaagggtgtattgtaatattcttatgcaaggactagtggaggGAATGAGAGATGGTC---AGCCTTAAACTGCCATTTGCCCTCTAT--ATCAGGGCTCAGGGActttcagactctccagggattccttacagtttttacacttgtttctcagttgcaaacataatctcttcactc-tgtgagaactctagatctgaatccttgtta-tgagtcaggagtccactctagtttactctcttgtcagtaactagaCTTGAAATGTTTTGATATTAATTGATATAGTAATA-AGATTGGTTAGAGAAATAGTGAAGAGACAGCATCCCCATCCTATGACCATagcagcaccagaaga---g-aaaaacacatctacacagtttttccattggcataggccctggtattct--gttagggaacaggtgataaaggaaatac-aaagggtctttgtacttactttcagaatgtattttcttt-----atcatgaaaagaatcccaggaaattttgcttctaattg---ct----tcttgtg------tatctactaccatcccttgctaaattattgatacgtttcctcaaatctcggcgtga---tgt---cctacattccaaa-ttttcaatagctgaaa---ttttcaccgtttcagtgcct i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21954414 659 - 58131712 caatagaga-ggtggaagggcaaagcttgaagc--agagagcagtgaagggtgtattgtaatattcttatgcaaggactagtggaggGAATGAGAGATGGTC---AGCCTTAAACTGCCATTTGCTCTCTGT--ATCAGGGCTCAGGGACTTTCAGACTCTCCAGGGATTCCTTACAGTTTTTACACTTGTTTCTCAGTTGCAAACATAATCTCTTCACTC-TGTGAGAACTCTAGATCTGAATCCGTGTTA-TGAGTCAGGAGTCCACTCTAGTTTACTCTTTTGTCAGTAACTAGACTTGAAATGTTTTGATATTAATTGATATAGTAATA-AGATTGGTTAGAGAAATAGTGAAGAGACAGCATCCCCATCCTATGACCATATCAGCACCAGAAAA---G-AAAAACacatctacacagtttttccattggcataggccctggtattct--gttagggaacaggtgataaaggaaatac-aaagggtctttgtacttactttcagaatgtattttcttt-----atcatgaaaagaatcccaggacattttggttctaattg---ct----tcttgtg------tatctactaccatcccttgctaaattattgatacgtttcctcaaatctcggcatga---tgt---cctacattccaaa-ttttcaatagctgaaa---ttttcaccgtttcaatgcct i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 49282 661 + 2620224 caatagaga-ggtggaagggcaaagcttgaagcagagagagcagtgaagggtgtattgtaatattcttatgcaaggactagtggagggaatgagagatggtC---AGCCTTAAACTGCCATTTGCCCTCTAT--ATTAGGGCTCAGGGActttcagactctccagggattccttacagtttttacacttgtttctcagttgcaaacataatctcttcactc-tgtgagaactttagatctgaatccttgtta-tgagtcaggagtccactctagtttactctcttgtcagtaactagaCTTGAAATGTTTTGATATTAATTGATACAGTAATA-AGATTGGTTAGAGAAATAGTGAAGAGACAGCATCCCCATCCTATGACCATATCAGCACCAGAAGA---G-AAAAACACATCTACACAGTTTTTCCATTGGCATAGGCCCTGGTATTCT--GTTAGGGAACAGGTGATAAAGGAAATAC-AAAGGGTCTTTGTACTTACTTTCAGAATGTATTTTCTTT-----ATCATGAAAAGAATCCCAGGAGATTTTGCTTCTAATTG---CT----TCTTGTG------TATCTACTACCATCCCTTGCTAAATTATTGATACGTTTCCTCAAATCTCGGCGTGA---TGT---CCTACATTCCAAA-TTTTCAATAGCTGAAA---TTTTCACCGTTTCAGTGCCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2229448 661 + 10629787 caatagaga-ggtggaagggcgaagctcgaagcagagagagcagtgaagggtgtattgtaatattcttatgcaaggactagtggaggGAATGAGAGATTGTC---AGCCTTAAACTGCCATTTGCTGTCTAG--ATCAGGGCTCAGGGActttcagactctccagggattccttacagtttttacactggtttctcagttgcaaacataatctctccactc-tgtgagaactctagatctgaatccttgtga-tgagtcaggagtccgctctagtttactctcttgtcagtaactagaCTTGAAATGTTTTGATATTAATTGATATAGTAATA-AGATTGGTTAGAGAAGTAGTGAAGAGACAGCATCCCCATCCTGTGACCATATCAGCACCAGAAGA---G-AAAAACCCATCTACGCAGTTCTTCCATTGGCATAGGCTCTGGTATTCT--GTTAGGGAACAGGTGATAAAGGAAATAC-AAAGGGTCTTTGTACTTACGTTCAGAATGTATTTTCTTT-----ATCGTGAAAAGAATCCAAGGACATTTTGCTTCTAATTG---CT----TCTTGTG------TATCTACTACCATCCCTTGCTAAATTATTGATACATTTCCTCAAATCTCGGCATGA---TGT---CCTACATTCCAAA-TTTTCAATAGCTGAAA---TGTTCACCTTTTCAGTGCCT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24189194 647 + 132174527 gaatagaga--gtgggaaggcaaagcctgaagcagagaaagcagtgaagcgcttactgtaatattcttttgtgagaaatagtggAGATAATGAGAGGTGATC---AGTCTTAAACTGCCATTTGCTCTCTAT--ATCAGGGCTCAGGGACTTTCAGACTCTCCAGGGATTCTTTACAGTTTTGACATTTGTTTCTCAGTTGCGAACATAATCTCTTCACTC-TATGAGATCTCTAGATCTGAATCCTTGTTAGGGAGTCAGGAAGCCATTCTAGCTTACTCTCTTGTCAGTAACTAGACTTGAAATGTTTTGATAT----------TGTAATA-AGATTAGTTAGAGAAATAGCAAAGAGA----GTCCCCATCCTATGACCACACcagcaccagaaga---g-aaaaacacatctacactgtttttccattggcatgggccctcgtattct--gttagggagcaggttataaaggaaatgc-aaagggtctttgtacttattttcagaatgtattttcttt-----atcatgaaaagaatccaaagcctttttgtttctaattg---ct----tcttatg------tttccactaccatcccttgctaaattattgatatgtttcctcaaatcgcagcatga---tgc---cctacattccaaa-ttttcaatagctgaaa---tgttcaccttttcagtgtcc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10584731 651 - 21366645 gaatagaga--gtgggaaggcaaagcctgaagcagagaaagcagtgaaggagttactgtaatattcttttgtgagaagtagtggAGATAATGAGAAGTGCTC---AGTCTTAAACTGCCATTTGCTCTCTAT--ATCAGGGCTCAGGGActttcagactctccagggattccttacagttttgacatttgtttctcagttgcaaacataatctcttcactc-tatgaggtctctagatctgaatccttgttagggagtcaggaatccattctagcttactctcttgtcagtaactagaCTTGAAATGTTTTGATAT----------AGTAAAA-AGATTAGTTAGAGAAATAGCAAAGAGA----GTCCCCATCCTATGACCACACCAGCACCAGAAGA---G-AAAAACACATCTACACTGTTTTTCCATTGGCACGGGCCCTCGTATTCT--GTTAGGGAGCAGGTTATAAAGGAAATGC--AAGGGTCTTTGTACTTATTTTCAGAATGTATTTTTTTTTTTTAATCAAGAAAAGAATCCAAAGCCTTTTTGTTTCTAATTG---CT----TCTTATG------TTTCTACTACCATCCCTTGCTAAATTATTGCTATGTTTCCTCAAATCACAGCATGA---TGC---CCTACATTCCAAA-TGTTCAATAGCTGAAA---TTTTCACCTTTTCAGCGTCC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3735538 647 - 13033340 gaatagaga--gtgggaaggcaaagcctgaagcagagaaagcagtgaagggcttactgtaatattcttttgtgagaaatagtggAGATAATGAGAGGTGATC---AGTCTTAAACTGCTATTTGCTCTCTAT--ATCAGGGCTCAGGGActtccagactctccatggattccttacagttttgacatttgtttctcagttgcaaacataatctcttcactc-tatgagatctctagatctgaatccttgttagggagtcaggaatccattctagcttactctcttgtcaataactagaCTTGAAATGTTTTGATAT----------AGTAATA-AGATTAGTTAGAGAAATAGCAAAGAGA----GTCCCCATCCTATGACCACACCAGCAACAGAAGA---G-AAAAACACATCTACACTGTTTTTCCATTGGCATGGGCCCTCGTATTCT--GTTAAGGAGCAGGTTATAAAGGAAATGC-AAAGGGTCTTTGTACTTATTTTCAAAATGTATTTTCTTT-----ATCAAGAAAATAATCCAAAGCCTTTTTGTTTCTAATTG---CT----TCTTATG------TTTCTACTACCATCCCTTGCTAAATTATTGATATGTTTTCTCAAATCGCAGCATGA---TGC---CCTACATTCCAAA-TTTTCAATAGCTGAAA---TTTTCACCTTTTCAGTGTCC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5227289 647 + 11604778 gaatagaga--gtgGGAAGGCAAAGCCCGAATCAGAGAAAGCAGTGAAGGGCTTACTGTAATATTCTTTTGTGAGAAATAGTGGAGGTAATTAGAGGTGATC---AGTCTTAAACTGCCATTTGCTCTCTGT--ATCAAGGCTCAGGGActttcagactctccagggattccttacagttttgacatttgtttctcagttgcaaacataatctcttcactc-tatgaggtctttagatctgaatccttgttagggagtcaggaatccattctagcttactctcttgtcagtaactagaTTTGAAATGTTTTGATAT----------AGTAATA-AGATTAGTTAGAGAAATAGCAAAGAGA----GTCCCCATCCTATGACCACACCAGCACCAGAAGA---C-AAAAACACATCTATACTGTTTTTCCATTGGCATGGGCCCTCATATTCT--GTTAGGGAGCAGGTTATAAAGGAAATGC-AAAGGGTCTTTGTACTTATTTTCAGAATATATTTTCTTT-----ATCATAAAAAGAATCCAAAGCCTTTTTGTTTCTAACTG---CT----TCTTATG------TTTCTACTACCATCCCTTGCTAAATTATTGATATGTTTCCTCAAATCACAGCATGA---TGC---CCTACATTCCAAA-TTTTCAATAGCTGAAA---TTTTGACCTTTTCAGTGTCC i aotNan1.NW_018501505v1 I 1464 C 0 s otoGar3.GL873530 133173 659 + 36342412 gaataggga-ggtaaaagggcaaagcttgaagcagagagaa----gcaggattt-ttacaatatctatatgtgggaaatggtgaaggagatgagaggtgact---ggcCTCAGACTGCCATTTCCTCTCCACTGTTCAGGGCTCAGGGACTTTCACACTCTCCGCAGGTGCCTCACAATTTTTATTTTTATTTTTCAGGTGCAAACATAATCCCTTCACCC-CGTGACTTCTCTAGATCAGCATCCTTGTTAGGGAGGCCGCAATCCGCT----TTTACTTTCTTATCAGCAACTAGTCTTTAAATATTTTTA-GTTAATTGATAGAGTAGTA-AGGCTGGCCAGGAGGATAGTGAAGAGGAAAAATTCCCCTCCTCTGACAACATCGGCACTAGGAAAATGG-AAAGACACGTCTGCACCTTTTTCCTATTGGCATCAACCCTTGTATT-T--GTTAAGAAAC-GGTTATAAGGGAAATCTGAAAGGGTCTGTGTACT----TTTAGGATATCTTTTCTTT-----ATCCTGGAAAGAATCCGAGATATTTTTGCTTCTGATCG---TTACTGTTTTGCC------TATCTACCATCATCTCTCGTTACACTACTGACACTTTTCCTCAAATTTTGGCATGCTATTGT---CCTTCATTCTACA-TTTTCAATAGCTGGAATTTTTTTTACCTTTTCAGTG--- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13419241 630 + 40214260 gagtagaga---ctatagtgcaaagctagcagcagagagaccagttaggtgcttat-----tactcttaggtgagaaatAGTACAAATGATACGAGGTCATC---AGCCTCCAACTGCCATTTCTTCTGGAC--ATTAGAGCTCAAAGGCTT------------------CCTCACAGTTTCCACATTCACTTCTTAGGTGCAAACATGAACCCTTCACTTGTGTGACACCT-TAGATCTGGATTCTGGTTAGGGAGATAGCAGTCCACTCCAGTTTGTTATCCTGCCAGAATTTATACTGCAAATGTTTCGATATT-ACTAATATGATAATACAGA--GGTTAGAGGAATGGTGAAGAG-----GGCCAAATCCTCT--CTGTACCAAGACCAGAAGA---ATAGGAGTACATCTATATAGTTTCCCTATTGGCATAGGTCCTTATATTTT--GTCAGGAAACAA--TAATAGGGCTATAT-AAAGGGCTTCTCTACTTATTTTCAGGATGTCTTTTCTTT-----GTCATAAAAAGAAGCCACAGCATTTTTGCTTCTAATTGTTACT----TTTCATG------AAGCCACCACAAAC--TCACTAAATTATTGATG-Gtctcctcaaattgcagcatga---tgttgacttacattctaaa-ttttcagtggcctgag---ttctcaccttttcagtgccc i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1807828 671 - 2868945 gcgtagagactgttgaaaggcaattctagagacagagagaacaacccgggactttttgcaatattccTACTTGAGAACAAATGGATATAATGAAAGATGATC---AGCCTCAGGCTGCTATTTCCTGTGAAC--ATCAGGACACTGGagctttcagattcccctggggttccttgctgttttaatattcatttctcagatgcaaacactattccttcattcctgtgacttccctagagctagatcccagtcaggaagtcatcgatccattccagtttactatctggccagtaaccagaCTTCAAATATTTTGAAATGACTTGATATAGAATAT-GGA--GGTTAGAGGAAGAGTGAAGAGGTAAAGTTCCTCTTCTCTGTCCACATCAGCACCAGATGA---G-TAGAG-ATAAATGCACAATTTTCCTATTGTCATAGATGTATGTATTCTGGGTTGGAGGAGCAGTTATAAAGAAAATAA-AAAGGATTTTTCTACTTATTTTCAG-ATGTCTATTCTTT-----ATCATGAAAAGAAACCAAGGCATTTTTCCTTCTAATTA---CT----AGTTATTGTTCACTGTCCACCACTGTCTCCTGCTAAATTATTGATGCCTTTTTTTaaattttggcatgattttgt---ccgtcatcctaaa-tttttgatggattgaa---ttttcaccctttcaatgtcc i dasNov3.JH579377 C 0 C 0 a score=12376.000000 s hg38.chrUn_KI270749v1 18777 1 + 158759 t s panTro5.chr1 101801214 1 - 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr15 44378235 1 + 99763055 T i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 9807 1 - 24701 t i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67508862 1 - 121039945 T i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23417257 1 + 169600520 T i rheMac8.chr7 C 0 C 0 s macNem1.NW_012010577v1 13266084 1 - 40200012 T i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3253873 1 + 7633303 t i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21955073 1 - 58131712 t i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 49943 1 + 2620224 T i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2230109 1 + 10629787 T i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24189841 1 + 132174527 t i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10585382 1 - 21366645 T i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3736185 1 - 13033340 T i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5227936 1 + 11604778 T i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13419871 1 + 40214260 t i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1808499 1 - 2868945 t i dasNov3.JH579377 C 0 C 0 e otoGar3.GL873530 133832 0 + 36342412 C e macFas5.chr7 24021231 1 + 171882078 I a score=283437.000000 s hg38.chrUn_KI270749v1 18778 23 + 158759 caagtttatctcagtaaaaagtt s panTro5.chr1 101801215 23 - 228573443 CATGTTTACCTCAGTAAAAAGTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44378236 23 + 99763055 CATGTTTATCTTAGTAAAAAGTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 9808 23 - 24701 caagtttatctcagtaaaaagtt i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67508863 23 - 121039945 CATGTTTATCTTAGTAAAAAGTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23417258 23 + 169600520 CATGTTTATCTTAGTAAAAAGTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24021232 23 + 171882078 catgtttatcttagtaaaaagtt i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 13266085 23 - 40200012 CATGTTTATCTTAGTAAAAAGTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3253874 23 + 7633303 catgtttatcttagtaaaaagtt i cerAty1.NW_012000887v1 C 0 I 111 s chlSab2.chr26 21955074 23 - 58131712 catgtttatcttagtaaaaagtt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 49944 23 + 2620224 CATGTTTATCTTAGTAAAAAGTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2230110 23 + 10629787 CATGTTTATCTTGGTAAAAAGTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24189842 22 + 132174527 tatatttatcttagt-aaaagtt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10585383 23 - 21366645 CATGTTTATCCTAGTAAAAAGTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3736186 23 - 13033340 CATGTTTATCTTAGTAAAAAGTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5227937 23 + 11604778 CATGTTGATCTTAGTAAAAAGTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 133832 19 + 36342412 ----TTTATCTTACTGAACAGCA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13419872 23 + 40214260 catgttcattttagtaaaagatt i canFam3.chr30 C 0 I 1 s dasNov3.JH579377 1808500 23 - 2868945 catgtttattttagtaaaacttc i dasNov3.JH579377 C 0 C 0 a score=30541.000000 s hg38.chrUn_KI270749v1 18801 3 + 158759 gag- s panTro5.chr1 101801238 3 - 228573443 GAG- i panTro5.chr1 C 0 C 0 s panPan2.chr15 44378259 3 + 99763055 GAG- i panPan2.chr15 C 0 I 106 s gorGor5.CYUI01005671v1 9831 3 - 24701 gag- i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67508886 3 - 121039945 GAG- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23417281 3 + 169600520 GAG- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24021255 3 + 171882078 gag- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13266108 3 - 40200012 GAG- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3254008 3 + 7633303 GAG- i cerAty1.NW_012000887v1 I 111 C 0 s chlSab2.chr26 21955097 3 - 58131712 gag- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 49967 3 + 2620224 GAG- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2230133 3 + 10629787 GAG- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24189864 3 + 132174527 gag- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10585406 3 - 21366645 GAG- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3736209 3 - 13033340 GAG- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5227960 3 + 11604778 GAG- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 133851 3 + 36342412 GAG- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13419896 2 + 40214260 ga-- i canFam3.chr30 I 1 C 0 s dasNov3.JH579377 1808523 3 - 2868945 -agg i dasNov3.JH579377 C 0 C 0 a score=388827.000000 s hg38.chrUn_KI270749v1 18804 36 + 158759 aaagactgtaatagagttatttaatcagatTTTTTT--- s panTro5.chr1 101801241 35 - 228573443 AA-GACTGTAATAGAGTTATTTAATCAGATTTTTTT--- i panTro5.chr1 C 0 C 0 s panPan2.chr15 44378368 36 + 99763055 AAAGACTGTAATAGAGTTATTTAATCAGATTTTTTT--- i panPan2.chr15 I 106 C 0 s gorGor5.CYUI01005671v1 9834 36 - 24701 aaagactgtaatagagTGATTTAATCAGATTTTTTT--- i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67508889 36 - 121039945 AAAGACTGTAATAGAGTTATTTAATCAGATTTTTTT--- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23417284 36 + 169600520 AAATACAGTAATAGAGATATTTAATCAGATTTTTTT--- i rheMac8.chr7 C 0 I 111 s macFas5.chr7 24021258 36 + 171882078 aaatacagtaatagagatatttaatcagatTTTTTT--- i macFas5.chr7 C 0 I 111 s macNem1.NW_012010577v1 13266111 36 - 40200012 AAATACAGTAATAGAGATATTTAATCAGATTTTTTT--- i macNem1.NW_012010577v1 C 0 I 111 s cerAty1.NW_012000887v1 3254011 36 + 7633303 AAAGACTGTAATAGAGTTATTTAATCAGATTTTTTT--- i cerAty1.NW_012000887v1 C 0 I 1 s chlSab2.chr26 21955100 36 - 58131712 aaatacagtaatagagatatttaatcagatTTTTTT--- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 49970 36 + 2620224 AAACACAGTAATAGAGATATTTAATCAGATTTTTTT--- i manLeu1.NW_012108674v1 C 0 I 111 s colAng1.NW_012121598v1 2230136 36 + 10629787 AAATACAGTAATAGAGATATTTAATCAGATTTTTTT--- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24189867 36 + 132174527 aaatactgTGATAGACTTATTTAATCAGATTTTATT--- i calJac3.chr10 C 0 I 2 s saiBol1.JH378136 10585409 36 - 21366645 AAAGACTATTATAGACTTATTTAATCAGATTTTATT--- i saiBol1.JH378136 C 0 I 2 s cebCap1.NW_016107324v1 3736212 36 - 13033340 AAAGACTGTAATAGACTTATTTAATCAGATTTTATT--- i cebCap1.NW_016107324v1 C 0 I 2 s aotNan1.NW_018501505v1 5227963 36 + 11604778 AAAGACTGTGATAGACTTATTTAATCAGATTTTATT--- i aotNan1.NW_018501505v1 C 0 I 2 s otoGar3.GL873530 133854 32 + 36342412 AAAGTCTATAATGGCG----TCAATCAGATTTGATT--- i otoGar3.GL873530 C 0 I 3 s canFam3.chr30 13419898 36 + 40214260 acagtctgcaatggagttgcctaatcagattttgtt--- i canFam3.chr30 C 0 I 2 s dasNov3.JH579377 1808526 39 - 2868945 atagactgctttggaggtatttaatcagattttattttT i dasNov3.JH579377 C 0 C 0 a score=30828.000000 s hg38.chrUn_KI270749v1 18840 3 + 158759 CAT s panTro5.chr1 101801276 3 - 228573443 CAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44378404 3 + 99763055 TAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 9870 3 - 24701 CAT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67508925 3 - 121039945 CAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23417431 3 + 169600520 CAT i rheMac8.chr7 I 111 C 0 s macFas5.chr7 24021405 3 + 171882078 CAT i macFas5.chr7 I 111 C 0 s macNem1.NW_012010577v1 13266258 3 - 40200012 CAT i macNem1.NW_012010577v1 I 111 C 0 s cerAty1.NW_012000887v1 3254048 3 + 7633303 CAT i cerAty1.NW_012000887v1 I 1 C 0 s chlSab2.chr26 21955136 3 - 58131712 CAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 50117 3 + 2620224 CAT i manLeu1.NW_012108674v1 I 111 C 0 s colAng1.NW_012121598v1 2230172 3 + 10629787 CAT i colAng1.NW_012121598v1 C 0 I 111 s calJac3.chr10 24189905 3 + 132174527 CTT i calJac3.chr10 I 2 C 0 s saiBol1.JH378136 10585447 3 - 21366645 CTT i saiBol1.JH378136 I 2 C 0 s cebCap1.NW_016107324v1 3736250 3 - 13033340 CTT i cebCap1.NW_016107324v1 I 2 C 0 s aotNan1.NW_018501505v1 5228001 3 + 11604778 CTT i aotNan1.NW_018501505v1 I 2 C 0 s otoGar3.GL873530 133889 3 + 36342412 CAC i otoGar3.GL873530 I 3 C 0 s canFam3.chr30 13419936 3 + 40214260 cat i canFam3.chr30 I 2 C 0 s dasNov3.JH579377 1808565 3 - 2868945 CAT i dasNov3.JH579377 C 0 C 0 a score=66615.000000 s hg38.chrUn_KI270749v1 18843 6 + 158759 CTACCA s panTro5.chr1 101801279 6 - 228573443 CTACCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44378407 6 + 99763055 CTACCA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 9873 6 - 24701 CTACCA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67508928 6 - 121039945 CTACCA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23417434 6 + 169600520 CTACCG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24021408 6 + 171882078 CTACCG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13266261 6 - 40200012 CTACCG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3254051 6 + 7633303 CTACCG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21955139 6 - 58131712 CTACCA i chlSab2.chr26 C 0 I 111 s manLeu1.NW_012108674v1 50120 6 + 2620224 CTACCG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2230286 6 + 10629787 CTACCA i colAng1.NW_012121598v1 I 111 C 0 s calJac3.chr10 24189908 6 + 132174527 CTGCAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10585450 6 - 21366645 TTGCCA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3736253 6 - 13033340 TTGCCA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5228004 6 + 11604778 TTGCCA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 133892 6 + 36342412 CTACCG i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13419939 6 + 40214260 ccaCCA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1808568 6 - 2868945 CTATCA i dasNov3.JH579377 C 0 C 0 a score=2295857.000000 s hg38.chrUn_KI270749v1 18849 174 + 158759 --TAATTTTTGAATAAGGAAA-AACAGCAATACTTTTTCTCCTTACTTGGCAAGTAATTTTCATAGAGAGGAA---AAAAACAATCAAAACAGGTACAAAATGTAACAAAACCAAAGGACCATGTGAGGTGAAATTTAAAATGAGAAAAATGTCCACAGTACTTTGGGCAATGCGACTCC s panTro5.chr1 101801285 174 - 228573443 --TAATTTTTCAATAAGGAAA-AACATCAACACTTTTTCTCCTTACTTGGCAAATAATTTCCATAGAGAGGAA---AAAAGCAATCAAAACAGGTACAAAATGTAACAAAACCAAAGGACCATGTCAGGTGAAATTTAAAATGAGAAAAATGTCCACATTACTTTGGGCAATGCAACTCC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44378413 174 + 99763055 --TAATTTTTGAATAAGGAAA-AATATCAACACTTTTTCTCCTTACTTGGCAAATAATTTCCATAGAAAGGAA---AAAAACAATCAATACAGGTACAAAATGTTACAAAACCAAAGGACCATGTGAGGTGAAATTTAAAATGAGAAAAATGTCCACATTACTTTGTGCAATGCAACTCC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 9879 174 - 24701 --TAATTTTTGAATAAGGAAA-AACATCAACACTTTTTCTCCTTACTTGGCAAATAATTTTCATAGAGAGGAA---AAAAACAATCAAAACAGGTACAAAATGTAACAAAACCAAAGGACCATGTGAGGTGAAATTTAAAATGAGAAAAATGTCCACATTACTTTGGGCAATGCAACTCC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67508934 174 - 121039945 --TAATTTTTGAATAAGGAAA-AACATCAACACTTTTTCTCTTTACTTGGCAAATAATTTCCGTAGAGAGGAA---AAAAACAATCAAAACAGGTACAAAATGTTACAAAACCAAAGGACCATGTGAGATGAAATTTAAAATGAGAAAAATGTCCACATTACTTTGTGCAATACAACTCC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23417440 170 + 169600520 --TAATTTTTGAATAAGGAAA-AACATCAACACTTTTTCTCCTTACTTGGCAAATAATTTCCATAGAGAGGAA---AAAAA----CAAAACAGGTACAAAATGTTACAAAACCAAAGGACCATGTGAGGTGAAATTTAAAATGAGAAAAATGTCCACATTACTTTAGGCAATGCAACTCC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24021414 170 + 171882078 --TAATTTTTGAATAAGGAAA-AACATCAACACTTTTTCTCCTTACTTGGCAAATAATTTCCATAGAGAGGAA---AAAAA----CAAAACAGGTACAAAATGTTACAAAACCAAAGGACCATGTGAGGTGAAATTTAAAATGAGAAAAATGTCCACATTACTTTAGGCAATGCAACTCC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13266267 170 - 40200012 --TAATTTTTGAATAAGGAAA-AACATCAACACTTTTTCTCCTTACTTGGCAAATAATTTCCATAGAGAGGAA---AAAAA----CAAAACAGGTACAAAATGTTACAAAACCAAAGGACCATGTGAGGTGAAATTTAAAATGAGAAAAATGTCCACATTACTTTAGGCAATGCAACTCA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3254057 170 + 7633303 --TAATTTTTGAATAAGGAAA-AACATCAACACTTTTTCTCCTTACTTGGCAAATAATTTCCATAGAGAGGAA---AAAAA----CAAGACAGGTACAAAATGTTACAAAACCAAAGGACGATGTGAGGTGAAATTTAAAATGAGAAAAATGTCCACATTACTTTAGGCAATGCAACTCC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21955256 170 - 58131712 --TAATTTTTGAATAAGGAAA-AACATCAACACTTTTTCTCCTTACTTGGCAAATAATTTCCATAGAGAGGAA---AAAAA----CAAAACAGGTACAAAATGTTACAAAACCAAAGGACCATGTGAGGTGAAATTTAAAATGAGAAAAATGTCCACATTACTTTACGCAATGCAACTCC i chlSab2.chr26 I 111 C 0 s manLeu1.NW_012108674v1 50126 170 + 2620224 --TAATTTTTGAATAAGGAAA-AACATCAACACTTTTTCTCCTTACTTGGCAAATAATTTCCATAGAGAGGAA---AAAAA----CAAGACAGGTACAAAATGTTACAAAACCAAAGGACGATGTGAGGTGAAATTTAAAATGAGAAAAATGTCCACATTACTTTAGGCAATGCAACTCC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2230292 170 + 10629787 --TAATTTTTGAATAAGGAAA-AACATCAACACTTTTTCTCCTTACTTGGCAAATAATTTCCATGGAGAGGAA---AAAAA----CAAAACAGGTACAAAATGTTACAAGACCAAAGGACCATGTGAGGTGAAATTTAAAATGAGAAAAATGTCTACATTACTTTAGGTTATGCAGCTCC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24189914 174 + 132174527 --TAATTTTTGAATAAGGAAA-AGCATCAACATTTTTTCTCCTTGCTTGGCAAATAATTTCCATGGAGAGGAA---AAAAACAATCAAAACAGGTACAAAATGTTACAAAACCAAAGGACCATGCGAGGTGAAAGTTAAAATGAGAAAAATGTCCACATTACTTTGGGCAATGCAACTCC i calJac3.chr10 C 0 I 242 s saiBol1.JH378136 10585456 175 - 21366645 --TAATTTTTGAATAAGGAAA-AGCATCAACCCCTTTTCTCTTTACTTGGCAAATAATTTCCATGGAGAGGAA--GAAAAACAATCAAAACAGGTACAAAATGTTACAAAACCAAAGGACCATGTGAGGTGAAAGTTAAAATGAGAAAAATGTCCACATTACTTTGGGCAATGCAACTCC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3736259 174 - 13033340 --TAATTTTTGAATAAGGAAA-AGCATCAACACTTTTTCTCCTTACTTGGCAAATAATTTCCATGGAGAGGAA---AAAAACAATCAAAACAGGTACAAAATGTTACAAAACCAAAGGACCATGTGAGGTGAAAGTGAAAATGAGAAAAATGTCCACATTACTTTGGGCAATGCAACTCC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5228010 177 + 11604778 --TAATTTTTGAATAAGGAAA-AGCATCAATACTTTTTCTTCTTACTTGGCAAATAATTTCCATGGAGAGGAAAAAAAAAACAATCAAAACAGGTACAAAATGTTACAAAATCAAAGGACCATGTGAGGTGAAAGTTAAAATGAGAAAAATGTCCACATTACTTTGGGCAATGCAACTCC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 133898 170 + 36342412 --TAATTTTTAAATAAGGAAA-A-CATCAACTCTTTTCCTCCTGACTTTGCACAGAATTTCCATGGAGAGGAA---AACAA--ATCAAAACAGCTGCAAAATGTTAC-AGACCAAGGGACTCTCTGAGGTGAAAGTTAAAATGAGAAAAATGTCCACGTTACTTAGGGCAATGCAGCTCC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13419945 171 + 40214260 --TAATTTTTGAATAAGGAAATAACATCAACTCTTTTTCTCCTGACTTTGCAAAGAATTTCCACAGAGAAGAA---AAGAA--ATAAAAACAGCTGC-AAATGTTAC-AAACCAAGGGACCATATGAGGTGAAAGTTAAAATGAGAAAAATGCCCACATTACTTTGGGCAATGCAACTCC i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1808574 171 - 2868945 TTTAATTTTTAAATAAGGGAA-AACATCAA--CTTTTATTCCTGACTTTGCAAAGAATTCCCATGGAGAGGAA---AAGAA--ATCAAACCAGCTGCAAAATGTTAC-CAACCAAGGGACCATATGAGGTGAGCGCTAAAATGAGAAAAATGTCTGCATTACTTTGGGCAGCGCAATTCT i dasNov3.JH579377 C 0 C 0 a score=5993594.000000 s hg38.chrUn_KI270749v1 19023 462 + 158759 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAATAATTCTACAGGACTAAATATATATTCTGGTACTCAAGGGGA--------AAATGACATCATATAGAGTTTAGGTCTATTA------AAACAT--ATTTGTAGATGTGTAGGTATGAAAAATGCTTTTAGAGATGGGAAGAGA-AAAAAA------CTCATTTGTTTAACAAGTTCTGATGGGTGCTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACACTCAGGATGTAAATTGCGGTACATTTCAAATTACATGAGAAACTAAAGAAAA--TATCT--GTTTCGGGTCACTGAATAATTCATTCTTATTTTGTGTTTGTCCCTAATTTCTGTGATTTTATGAATAATTCAGAGCAATGATTTTACCTT---TCTCTACAGCTGTATTTGGTAAATGTCCACATTATTTTTGTTGCAAAGATGCAGCCAAGTTTCTTAGAATAGGAACAATGTTT s panTro5.chr1 101801459 462 - 228573443 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAATAATTCTACAGGACTAAATATATGTTCTGGTACCCAAGGGGA--------AAATGACATCATAGAGAGGTTAGGTCTATTA------AAACAT--ACCTGTAGATGTGTAGGTATAAAAAATGCTTTTAGAGATGGGAAGAGA-AAAAAA------CTCATTTGTTTAACAAGTTCTGTTGGGTGCTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACACTGAGGATGTAAATTGCAGTATATTTCAAATTACATGAGAAACTAAAGAAAA--TATCT--GTTTCAGGTCACTGAATAATTCATTCTTATTTAGTGTTTGTCCCTAATTTCTGTGATTTTATGAATAATTCAGATCAATGATTTTACCTT---TCTCTACAACTGTATTTGGCAAATGTCCACATTATTTTTGTTGCAAAGATGCAGCCAAGTTTCTTACAATAGGAACAATGTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44378587 461 + 99763055 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAATAATTCTACAGGACTAAATATATATTCTGGTATTCAGGGGGG--------AAATGACATCATAGAGAGGTTAGGTCTATTA------AAACAT--ATTTGTAGATGTATCGGTATAAAAATTGCTTTTAGAGCTGGGAAGAGA-AAAAAA------CTCATTTGTTTAACAAGTTCTGTTGGGTGCTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACAGTGAGGATGTAAATTGCAGTACATTTCAAATTACATGAGAAACTAAAGAAAA--TATCT--GTTACAGGTCACTGAATAATGCATCCTTATTTAGTGTTTGTCCCTAATTTCTGTGATTTTATGAATAATTCAGAGCAATGATTTTACCTT---TCTCTACAGCTATATTTGGCAAATTTCCACATCATTTTTGTTGCAAAGATGCAGCCAAGTTCCTTAGAATAGG-ACAAGGTTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 10053 451 - 24701 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAATAATTCTACAGGACTAAATATATATTCTGGTACCCAAGGGGA--------AAA-GACATCATATAGAGTTTAGGTCTATTA------AAACAT--ATTTGTAGATGTGTAGGTATGAAAAATGCTTTTAGAGATGGGAGGAGA-AAAAAA------CTCATTTGTTTAACAAGTTCTGATGGGTGCTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACACTGAGGATGTAAATTGCGGTACATTTCAAATTACATGAGAAACTAAAGAAAA--TACCT--GTTTCGGGTCACTGAATAATTCATTCTTATTTAGTGTTTGTCCCTAATTTCTGTGATTTTATGAATAATTCAGAGCAATGATTTTACCTT---TCTCTACAGCTGTATTTGGTAAATGTCCACATTATTTTTGTTGCAAAGATGCAGCCAAGTT----------GGGACAATGTTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67509108 462 - 121039945 TGGGAAATAGTAACTCAGTACCTGAGAGCTAAATAATTCTACAGGACTAAATATATATTCTGGTGTTCAGAGGGA--------AAATGACATCATAGAGAGGTTAGGTCTATTA------AAACAT--ATTTGTAGATGCGTCGGTATAAAAATTGCTTTTAGAGCTGGGAAGAGA-AAAAAA------CTCATTTGTTTAACAAGTTCTGTTGGGTGCTTTTCACTAAAAGAGAAACAT-CCTATGTTTATAACAGTGAGGATGTAAATTGCAGTACATTTCAAATTACATGAGAAACTAAAGAAAA--TATCT--GTTTCAGGTCACTGAATAATGCATCCTTATTTAGTGTTTGTCCCTAATTTCTGTGATTTTAAGAATAATTCAGAGCACTGATTTTACCTT---TCTCTACAGCTGTATTTGGCAAATTTCCACATCATTTTTGTTGCAAAGATGTAGCCAAGTTTCTTAGAATAGGAACAATGTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23417610 464 + 169600520 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAGTAATTCTACAGGACTAAATATATATTCTGGTATTCAGGGGGA--------AAATGACATCATAGAGAGGTTAGGTGTATTA------AAACATCCATTTGTAGATGTGTCAGTATAAAAATTGCTTTTAGAGATGGGAAGAGA-ACAAAA------CTCATTTGTTTAACGAGTTTTGTTGGGTGCTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACAGTGATGATGTAAATTGCAGTACATTTCAAATTACGTGAGAAACTAAAGAAAA--TATCT--GTTTCAGGTCACTGAATAATGCATCCTTAGTTAGTGTTTGTCCCTAATTTCTGTGATTTTATGAATAATTCAGAGCAATGATTTTACCTT---TCTCTACAGCTGTATTTGGCAAATTTCCACATCATTTTTGTTGCAAAGATGTAGCCAAGTTTCTTAGAGTAGGAACAATGTTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24021584 464 + 171882078 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAGTAAATCTACAGGACTAAATATATATTCTGGTATTCAGGGGGA--------AAATGACATCATAGAGAGGTTAGGTGTATTA------AAACATCCATTTGTAGATGTGTCAGTATAAAAATTGCTTTTAGAGATGGGAAGAGA-ACAAAA------CTCATTTGTTTAACGAGTTTTGTTGGGTGCTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACAGTGATGATGTAAATTGCAGTACATTTCAAATTACGTGAGAAACTAAAGAAAA--TATCT--GTTTCAGGTCACTGAATAATGCATCCTTAGTTAGTGTTTGTCCCTAATTTCTGTGATTTTATGAATAATTCAGAGCAATGATTTTACCTT---TCTCTACAGCTGTATTTGGCAAATTTCCACATCATTTTTGTTGCAAAGATGTAGCCAAGTTTCTTAGAGTAGGAACAATGTTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13266437 464 - 40200012 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAGTAATTCTACAGGACTAAATATATATTCTGGTATTCAGGGGGA--------AAATGACATCATAGAGAGGTTAGGTGTATTA------AAACATCCATTTGTAGATGTGTCAGTATAAAAATTGCTTTTAGAGATGGGAAGAGA-ACAAAA------CTCATTTGTTTAACGAGTTTTGTTGGGTGCTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACAGTGATGATGTAAATTGCAGTACATTTCAAATTACGTGAGAAACTAAAGAAAA--TATCT--GTTTCAGGTCACTGAATAATGCATCCTTAGTTAGTGTTTGTCCCTAATTTCTGTGATTTTATGAGTAATTCAGAGCAATGATTTTACCTT---TCTCTACAGCTGTATTTGGCAAATTTCCACATCATTTTTGTTGCAAAGATGTAGCCAAGTTTCTTAGAGTAGGAACAATGTTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3254227 464 + 7633303 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAGTAATTCTACAGGACTAAATATATATTCTGGTATTCAGGGGGA--------AAATGACATCGTAGAGAGGTTAGGTGTATTA------AAACATCCATTTGTAGATGTGTCAGTATAAAAATTGCTTTTAGAGATGGGAAGAGA-ACAAAA------CTCATTTGTTTAACGAGTTTTGTTGGGTGCTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACAGTGATGATGTAAATTGCAGTACATTTCAAATTACATGAGAAACTAAAGAAAG--TATCT--GTTTCAGGTCACTGAATAATGCATCCTTAGTAAGTGTTTGTCCCTAATTTCTGTGATTTTATGAATAATTCAGAGCAATGATTTTACCTT---TCTCTACAGCTGTATTTGGCAAATTTCCACATCATTTTTGTTGCAAAGATGTAGCCAAGTTTCTTAGAGTAGGAACAATGTTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21955426 461 - 58131712 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAGTAATTCTACAGGGCTAAATATATATTCTGGTATTCAGGGGGA--------AAATGACATCATAGAGAGGTTAGGTGCATTA------AAACATACATTTGTAGATGTATCAGTATAAAAATTGCTTTTAGAGATGGGAAGAGA-ACAAAA------GTCATTTGTTTAACGAGTTTTGTTGGGTGCTTTTCACTAAAAGAGAAA----CATACGTTTATAACAGTGATGATGTAAATTGCAGTACATTTCAAATTACATGAGAAACTAAAGAAAA--TATCT--GTTTCAGGTCACTGAATAATGCATCCTTATTTCGTGTTTGTCCCTAATTTCTGTGATTTTATGAATAATTCAGGGCAATGATTTTACCTT---TCTCTACAGCTGTATTTGGCAAATTTCCACATCATTTTTGTTGCAAAGATGCAGCCAAGTTTCTTAGAATAGGAACAATGTTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 50296 464 + 2620224 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAGTAATTCTACAGGACTAAATATATATTCTGGTATTCAGGGGGA--------AAATGACATCATAGAGAGGTTAGGTGTATTA------AAACATCCATTTGTAGATGTGTCAGTATAAAAATTGCTTTTAGAGATGGGAAGAGA-ACAAAA------CTCATTTGTTTAACGAGTTTTGTTGGGTGCTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACAGTGATGATGTAAATTGCAGTACATTTCAAATTACGTGAGAAACTAAAGAAAA--TATCT--GTTTCAGGTCACTGAATAATGCATCCTTAGTAAGTGTTTGTCCCTAATTTCTGTAATTTTATGAATAATTCAGAGCAATGATTTTACCTT---TCTCTACAGCTGTATTTGGCAAATTTCCACATCATTTTTGTTGCAAAGATGTAGCCAAGTTTCTTAGAGTAGGAACAATGTTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2230462 464 + 10629787 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAGTAATTCTACAGGACTAAATATATATTCTGGTATTCAGGGGGA--------AAATGACATCATAGAGAGGTTAGGTGTATTA------AAACATACATTTGTAGATGTGTCAGTATAAAAATTGCTTTTAGAGATGGGAAGAGA-ACAAAA------CTCATTTGTTTAACGAGTTCTGTTGGGTGCTTTTCACTAAAAGAGAAACAT-CATGTGTTTATAACAGTGATGATGTAAATTGCAGTACATTTCAAATTACATGAGAAACTAAAGAAAA--TATCT--GTTTCAGGTCACTGAATAATGCATCCTTATTTAGTGTTTGTCCCTAATTTCTGTGATTTTATGAATAATTCAGAGCAATGATTTTACCTT---TCTCTACAGCTGTATTTggcaaatttccacatcatttttgttgcaaagatgcagccaagtttcttagaataggaacaatgttt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24190330 477 + 132174527 TGGGAAATAGTAACTCAGCACATGAGAGCTAAATAATTTCACAGGACTCAATATATATCCTGGTGTTCAGGGGGATAGGGGGAAAATGACATAATAGAGAGGTTAGGTCTATTAAAACATAAACATACATTTGTAGATGTGTCAGTATAAAAATTGCTTTTGGAAATGGGAAGAAA-GAAAAA------CTCATTTGTTTAACAAGTTCTGTTGGGTGGTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACAGTGAAGATGTAAATTGCAGTACGTTTAAAGTTATAGTAGAAACTAAAGAAAA--TATCA--ATTTCAGGTCACTGAATAATGCATCCTTATTTAGTGTTTGCCCCTAATTTCTGTGATTTTATGAATAATTCAGAGCAATGATTTTACCTT---TCTCTACAGCTGTATTTGGCAAATTTCCACTTCATTTTTGTTGCAAAGACACAGCCAA-TTTCTTAGAATAGGAACAATGTTT i calJac3.chr10 I 242 C 0 s saiBol1.JH378136 10585631 468 - 21366645 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAATAATTCTACAGAACTCAATATATATTCTGGTGTTCAGGGGAAAAGGGGGAAAATGACATAACAGAGAGGTTAGGTCTATTA------AAACATACATTTGTAGATGTGTCAGTATAAAAATTGCTTTTGGAAATGGG----AA-GAAACA------TTCATTTGTTTAACAAGTTCTGTTGGGCGGTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACAGTGAAGATGTAAATTGCAGTACGTTTAAAATTACACTAGAAATTAAAGAAAA--TATCT--GTTTCAGGTCACTGAATAATGCATCTTTATTTAGTGTTTGCCCCTAATTTCTGTGATTTTATGAATAATTCAGAGCAATGATTTTACCTT---TCTCTACAGCTGTATTTGGCAAATTTCCACTTCATTTTTGTTGCAATGACATAGCCAAGTTTCTTAGAATAGGAACAATGTTT i saiBol1.JH378136 C 0 I 6600 s cebCap1.NW_016107324v1 3736433 466 - 13033340 AGGGAAATAGTAACTCAGCACCTGAGAGCTAAATAATTCTACAGAACTCAATATATATACTGGTGTTCAGGGGGAAAGGGGGAAAATGACATAACAGAGAGGTTAGGTCTATTA------AAACATACATTTGTAGATGTGTCAGTATAAAAATTGCTTTTGGAAATAGGAAGAAA-GAAAAA------CTCATTTGTTTAACAAGTTCTGTTGGGTGGTTTTCACTAAAAGAGAAATAT-CA------CATAACAGTGAAGATGTAAATCGCAGTACATTTAAAATTACAGTAGAAACTAAAGAAAA--TATCT--GTTTCAGGTCACTGAATAATGCATCCTCATTTAGTGTTTGCCCCTAATTTCTGTGATTTTATGAATAATTCAGAGCAATAATTTTACCTT---TCTCTACAGCTGTATTTGGCAAATTTCCACTTCATTTTTGTTGCAATGACACAGCCAAGTTTCTTAGAATAGGAACAATGTTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5228187 472 + 11604778 TGGGAAATAGTAACTCAGCACCTGAGAGCTAAATAATTCTACAGGACTCAATATATATTCTGGTGTTCAGGGAGAAAGGGAAGAAATGACATAACAGGGAGGTTAGGTCTATTA------AAACATACATTTGTAGATGTGTCAGTATAAAAATTGCTTTTGGAAATGGGAAGAAA-GAAAAA------CTCTTTTGTTTAACAAGTTCTGTTGGGTGGTTTTCACTAAAAGAGAAACAT-CATATGTTTATAACGGTGAAGATGTAAATTGCAGTACATTTAAAATTACAGTAGAAACTAAAGAAAA--TATCT--GTTTCAGGTCACTGAATAATGCATCCTTATTTAGTGTTTGCCCCTAATTTCTGTGATTTTATGAATAATTCAGAGCAATGATTTTACCTT---TCTCTACAGTTGTATTTGGCAAATTTCCACTTCGTTTTTGTTGCAAAGGCACAGCCAAGTTTCTTAGAATAGGAGCAATGTTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 134068 466 + 36342412 TGGGAAATAGGAACTCAGCACTTGAGAGCTAAATAATTCTATAGGACTAAATATATATTCTAGTATT----GGGG--------GGATGACATCATAGAGAGATTAGGTCTATGA------AAACATACATTTGTAGACACGTTGGTATGAAAATTGCTTTTCGAGATGAGAAGAAATGCTTGT------CTCATTTGTCTAACAA-TTCTGTTGGGTGCTTTTCCCTAAAAAAGAGCCACACGTGTGCTTGTAACAGTGAGGGTATAAATTGCAGTATGTTTCCAATTACATGAGAAACTAAAGATAATGTGTCT--GTTTCAAGTCACTGAGTAATGCATCCTTGTTCAGTGTTTGTCCCTAAATTCTGTGattccatgaataattctgagcaatgattttaccttctctctttacagcagcatttggcaagtttccacttcatttttgttgcaaagacACAGCCAAGGTTCCTAGAATGGGAATAACATTC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13420116 475 + 40214260 AGGGAAATAGTAACTCAGCACCTGAGAGCTAAATAATTCTAGAGGAATAAATATATATTCTGGTAGTCTGGGGGA--------AAATGACATCATGGAGAGATTAGGTCTATTA------AAACATACATTTGTAGACATGTTGGTGTGAAAATTGCTTTTAGAGATGGAAAGAGG-AGAAAAGCTCATCTTATTTGTCTAACAA-TTCTATTGGGTGCTTTTCACTAAAAGAGAACCATCCATATGTTTATAACAGTGAGAGTGTGAATTGCAATACATTTCAAATTACATGAGAAACTAAAGAAAA--TTTCTCAGTTTTAGGCCATTGAGTAATGCTTCCTTGTTTACTGTTTGTCCCTAAAATTTGTGATTTTATGAATAATTGAGAGCAATGATTTTACCTTCTTTCTCTACCATAGCATTTGGCAAGTTTCCACTTCATTTTTGTTACAAAGACACAGCTGAGATTCTTAGAATACGAATAATGTTT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1808745 463 - 2868945 AGGAAAATAGTAACTCAGTAACTGAGAGCAAAATAATTCTAGAGAAATAAATGTATATTCTGGTATTCAAGGGG---------AAATGACATCATAGAGAGATTAGATCTATTA------AAACATACATCTGTAGACATGTCCGATGAAAAGAC-------AAGATGGCAAAAGG-AGAAAAGCTCATCTTATTTGTCTAAC-AGTTCTGCTGGGTGTTTTTCACTAAAAGGAACCCATCCATATGTTTCTAACAGTGAGGGTGTGAACTGCAGTACATTACAAATTACATGAGGAACTAAAGAAAA--TGTCT--GTTTCAGGTCATTGGATAATGCATCCTTGTTTAGTGTTTGTCCCTAAAAGTTATG-TTGTATGAATAATTCAGAGCAATAATTTTACCTTCTTTCTCTGCAGCAACATTTGGCAAGTTTCCACTTCA-TTTTGTTGCAGGAACACAGCTGAGTTTCTCAGAATGGGAACAAAATTT i dasNov3.JH579377 C 0 C 0 a score=3081506.000000 s hg38.chrUn_KI270749v1 19485 246 + 158759 AGAATGTATTTTTTCCATAATGAAAAATATTATGAAAGGGGAAAC------TAAGATATAGCTTACAGGGTTCTCTATTGTGAT-AACTAAAACATACTT-AGCCTCAAGTAAAACTGACATCTTGCTAACTGTTGGTGGTGAAGGAGAAAGAAGACAACACTGAACCAGACTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAACAAATTCAAGCTTGAACTGAGTTGACATTGGT s panTro5.chr1 101801921 245 - 228573443 AGAATGTATTTTTTCCATAATGAAAAATATTATGAAAGGGGAAAC------TAAGATATAGCTTACAGGGATCTCTATTGTGAT-AACTAAAACAGACTT-AGCCTCAAGTAAAACTGACATCTTGCTAACTGTTGGTGGTGAAGGAG-AAGAAGACAACACTGAACCAGACTGGGGAAAGATGAATTCCAATTATTT-AGAGATTTGTCA----------CCC-AAAGCAAAACAAATTCAAGCTTGAACTGAGTTGACATTGAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44379048 246 + 99763055 AGAATGCATTTTTTCCATAATGAAAAATATTATGAAAGGGGCAAC------TAAGATATAGCTTACAGGGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCCTCAAGTAAAACTAACATCTTGATAACTGTTGGTGGTGAAGGAGAAAGAAGACAACATTGAGCCAGACTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAACAAATTCAAGCTTGAACTGAGCTGACATTGAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 10504 246 - 24701 AGAATGTATTTTTTCCATAATGAAAAATATTATGAAAGGGGAAAC------TAAGATATAGCTTACAGGGTTCTCTATTGTGAT-AACTAAAACATACTT-AGCCTCAAGTAAAACTGACATCTTGCTAACTGTTGGTGGTGAAGGAGAAAGAAGACAACACTGAACCAGACTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAACAAATTCAAGCTTGAACTGAGTTGACATTGGT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67509570 246 - 121039945 AGAATGCATTTTTTCCATAACGAAAAATATTATGAAAGGGGCAAC------TAAGACATAGCTTACAGGGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCCTCAAGTAAAACTGACATCTTGATAACTGTTGGTGGTGAAGGAGAAAGAAGGCAACATTGAGCCAGACTGGGGAAAGATGAATTCAAATTAGTT-ACAGATTTGTCA----------CCC-AAAGCAAAACAAATTCAAGCTTGAACTGAGTTGACATCGAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23418074 246 + 169600520 ACAGTGTATTTTTTCCATAATGGAAAATATTATGAAAGGGGCAACT-----TAAGATATAGCTTACAGGGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCCTCAAGTAAAACTGACATCTTGATAACTGTTGGTGGTGAAGGAGAAAGAAGACAACATTGAACCAGACTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAA-AAATTCAAGCTTGAACCGAGTTGACATTTAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24022048 246 + 171882078 ACAGTGTATTTTTTCCATAATGGAAAATATTATGAAAGGGGCAACT-----TAAGATATAGCTTACAGGGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCCTCAAGTAAAACTGACATCTTGATAACTGTTGGTGGTGAAGGAGAAAGAAGACAACATTGAACCAGACTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAA-AAATTCAAGCTTGAACCGAGTTGACATTTAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13266901 246 - 40200012 ACAGTGTATTTTTTCCATAATGGAAAATATTATGAAAGGGGCAACT-----TAAGATATAGCTTACAGGGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCCTCAAGTAAAACTGACATCTTGATAACTGTTGGTGGTGAAGGAGAAAGAAGACAACATTGAACCAGACTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAA-AAATTCAAGCTTGAACCGAGTTGACATTTAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3254691 245 + 7633303 ACAATGTGTTTTTTCCATAATGGAAAATATTATGAAAGGGGCAAC------TAAGATATAGCTTACAGGGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCCTCAAGTAAAACTGACATCTTGATAACTGTTGGTGGTGAAGGAGAAAGAAGACAACACTGAACCAGACTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAA-AAATTCAAGCTTGAACCGAGTTGACATTTAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21955887 245 - 58131712 AGAATGTATTTTTTCCATAATGGAAAACATTATGAAAGGGGCAAC------TAAGATATAGCTTACAGGGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCTTCAAGTAAAACTGACATCTTGATAACTGTTGGTGGTGAAGGAGAAAGAAGACAACATTGAACCAGACTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAA-AAATTCAAGCTTGAACTGAGTTGACATTTAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 50760 245 + 2620224 ACAATGTATTTTTTCCATAATGGAAAATATTATGAAAGGGGCAAC------TAAGATATAGCTTACAGGGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCCTCAAGTAAAACTGACATCTTGATAACTGTTGGTGGTGAAGGAGAAAGAAGACAACATTGAACCAGACTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAA-AAATTCAAGCTTGAACCGAGTTGACATTTAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2230926 245 + 10629787 cgaaTGTATTTTTTCCATAATGGAAAATATTATGAAAGGGGTAAC------TACGATATAGCTTACAGGGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCTTCAAGTAAAACTGACATCTTGATAACTGTTGGTGGTGAAGGAGAAAGAAGACAACATTGAACCAGACTAGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAACCAAAA-AAATTCAAGCTTGAACTGAGTTGACATTTAT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24190807 245 + 132174527 AGAATGCCTTTTTTCTGTAATGGAAAATATTATGAAAGGGGCAAC------TAAGATATAGCTTACAGAGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCCTAAAGGAAAAT-GACATCTTGTTAACTGTTGGTGGTGAAAGAGAAAGAAGACAACATTGAACCATACTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAACAAATTCAAGCTTGAACTGAGTTGACATTGAT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10592699 246 - 21366645 AGAATGTATTTTTTCTGTGATGGAAAATATTATGAAAGGGTCAAC------TAAGATATAGCTTACAGAGTTCTCTATTGTGAT-AACGAAAACAGATTT-AGCCTAAAGGAAAACGGACATCTTGTTAACTGTTGGTGGTGAAAGAGAAAGAAGACAACATCGAGCCAGATTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAACAAATTCAAGCTTGAACTGAGTTGACATTGAT i saiBol1.JH378136 I 6600 C 0 s cebCap1.NW_016107324v1 3736899 246 - 13033340 AGAACGTATTTTTTCTGTAATGGAAAATATTATGAAAGGGGCAAC------TAAGATATAGCTTACAGAGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCCTAAAGGAAAACTGACATCTTGTTAACTGTTGGTGGTGAAAGAGAAAGAAGACAACATGGAACCAGACTGGGGAAAGATGAATTCAAATTCGTT-AGAGATTTGTCA----------TCC-AAAGCAAAACAAACTCAAGCTTGAACTGAGTTGACATTGAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5228659 243 + 11604778 AGAATGTATTTTTTCTGTAATGGAAAATATTATGAAAGGGGCAAC------TAAGCTATAGCTTACAGAGTTCTCTATTGTGAT-AACTAAAACAGACTT-AGCCTAAAGGAAAACTGAAATCTTGTTAACTGTTGGTGGTGAAAGAGA---AAGACAACATTGAACCAGACTGGGGAAAGATGAATTCAAATTAGTT-AGAGATTTGTCA----------CCC-AAAGCAAAACAAATTTAAGCTTGAACTGAGTTGACATTGAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 134534 250 + 36342412 ACAGTGTAATTTTTCCATAATGAGTAGTATTATGAAAGGGGCAAC------TGAGATATAGGTTATAGGGTTCTCAATTGTAAGAAAACAAAACAGACTT-CGCCTCAAGGAAAACTAGCAACTTGATAACTGTAGGTGGTAAAAGAGAGAGAAAATGACCATGGGCTAGACTCAAAAAGGACAAATTTAACTTAGTTAAGATATATGTTACCCTCCTCCTCCC-AAAAAAGGA--------AGCTTGAGCTGCGCTGACAATGAT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13420591 245 + 40214260 AGAATGTA-TTTTTCCACAGTGAAAAATATTATGAAAAGGGCAAC------AAAGATATAGCTTATGGAATCATCAATTATGAA-ACTTAAAAAGAATTTGAGCCTCAAGGAAAGCTCGTGTCTTAGTAACTGTTAATGGTATAAGAAAAAGAAGATAGCATTGAGCCAGTCTGGGAAAAGGTGAATTATATTAAGTT-ATAGATCTATCA----------CTT--AATCAAAACAAATTCAAGCTTGAATGGAACTGATGTTAAT i canFam3.chr30 C 0 I 37 s dasNov3.JH579377 1809208 235 - 2868945 AGAATGTA-TTTTTCCATAATGAAAAATATCATGAAA-GCACAACTTAATATAAGATATAGTTTACAGGGTTCTCAATTGTGAT-AACTAAAACAGATTT-AGCCTCAAGGAAAACTGGCAACTTGGTAATTGTTGGTGGTGAAAGAGAAGGAAGGCTGCATGGAGC----------------AAATTCAACTTATTT-ATAGATCTATTA----------CCCAAAAGCAAAACAAATCCAAGCTTGAACTGAGCTGACACTGAT i dasNov3.JH579377 C 0 I 560 a score=2736511.000000 s hg38.chrUn_KI270749v1 19731 270 + 158759 AGTTATTATGAAC------------------TGCAAAT-------ccctcaaattcatatgatgaaatcctaactctcaatgtattggtattaggaggt-aaacctttgggaggtaattaggtcatgaagatgaaaccctcatcaaaggaaagtagtgcccttctagaaagagatacaagaga-gatttttctctcctccatgtgaggataaaataagacagccatctgtaaaccaggaagacagccttcaccaagaacccaaccatgctgactccctgatttcagatttacagcct s panTro5.chr1 101802166 262 - 228573443 AATTATtttg-------------------------aat-------ccctcaaattcctatgttgaaatcctaactctcaatgtgttggtgttaggaggt-aaacctttgggaggtaattaggtcatgaagatgaaactctcatcgaaggaaagtagtgcccttctaagaagagatacaagaga-gatttttctctcctccaagtgaggataaaataagacagccatctgtaaactaggaagacagccttcaccaagaacccaaccatgctgactccctgatttcagatttac-gcct i panTro5.chr1 C 0 C 0 s panPan2.chr15 44379294 270 + 99763055 AGTTATTATGAAC------------------CGCAAAT-------ccctcaaattcgtatgttgaaatcctaactctcaatgtgttggtattaggaggt-aatccttggggaggtaattaggtcatgaagatgaaggccccatcaaaggaaagtagtgcccttctaagaagagatacaagaga-gatttttctctcctccatgtgaggataaaataagacggccatctgtaaaccaggaagacagacttcaccaagaacccaaccatgttgactccctgatttcagatttacagcct i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 10750 269 - 24701 AGTTATTATGAAC------------------TGCAAAT-------ccctcaaattcatatgttgaaatcctaactctcaatgtattggtattaggaggt-aaacctttgggaggtaattaggtcatgaagatgaaaccctcatcaaaggaaagtagtgcccttctaggaagagattcaag-ga-gatttttctctcctccatgtgaggataaaataagacagccatctgtaagccaggaagacagccttcaccaagaacccaaccatgctgactccctgatttcagatttacagcct i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67509816 269 - 121039945 AGTTATTATGAAC------------------CGCAAAT-------ccctcaaattcatatgttgaaatcctaactctcaatgtgttggtattaggaggt-aatcctttgggaggtaattaggtcatgaagatgaagccctcatcagaggaaagtagtgccc-tctaagaagagatacaagaga-gatttttctctcctccatgtgaggataaaataagacagccatcagtaaaccagggagacagccttcacccagaacccaaccatgttgactccctgatttcagatttacagcct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23418320 270 + 169600520 AGTTATTATGAAC------------------TGCAAAT-------ccctcaaattcatatggtaaaatcctaactctcaatgtgttggtattaggaagt-aatcctttaggaggtaattaggtcatgaagatgaagcccttatcaaaggaaagtagtgcccttctaggaagagacacaagaga-gatttttctctcctccatgtgaggataaaatatgacagccatctgtaaaccaggaagacagccttcaccaagaacccaaccatgttgactccctgatttcagatttgcagctt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24022294 270 + 171882078 AGTTATTATGAAC------------------TGCAAAT-------ccctcaaattcatatggtaaaatcctaactctcaatgtgttggtattaggaagt-aatcctttaggaggtaattaggtcatgaagatgaagcccttatcaaaggaaagtagtgcccttctaggaagagacacaagaga-gatttttctctcctccatgtgaggataaaatatgacagccatctgtaaaccaggaagacagccttcaccaagaacccaaccatgttgactccctgatttcagatttgcagctt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13267147 270 - 40200012 AGTTATTATGAAC------------------TGCAAAT-------ccctcaaattcatatggtaaaatcctaactctcaatgtgttggtattaggaagt-aatcctttaggaggtaattaggtcatgaagatgaagcccttatcaaaggaaagtagtgcccttctaggaagagacacaagaga-gatttttctctcctccatgtgaggataaaatatgacagccatctgtaaaccaggaagacagccttcaccaagaacccaaccatgttgactccctgatttcagatttgcagcct i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3254936 270 + 7633303 AGTTATTAtgaac------------------tgcaaat-------ccctcaaattcatatgttaaaatcctaactctcaatgtgttggtattaggaagt-aatcctttaggaggtaattaggtcatgaagatgaagccctcatcaaaggaaagtagtgcccttctaagaagagacacaagaga-gatttttctctcctccatgtgaggataaaatatgacagccatctgtaaaccaggaagacagccttcaccaagaacccaaccatgttgactccctgatttcagatttgcagcct i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21956132 270 - 58131712 AGTTATTATGAAC------------------CGCAAAT-------ccctcaaattcatatgttaaaatcctaactctcaatgtgttggtattaggaagt-aatcctttaggaggtaattaggtcatgaagatgaagccctcatcaaaggaaagtagtgcccttctaagaagagacacaagaga-gatttttctctcctccatgtgaggataaaatatgacagccatctgtaaagcaggaagacagccttcaccaagaacccaaccatgttgactccctgatttcagatttacagcct i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 51005 270 + 2620224 AGTTATTAtgaac------------------tgcaaat-------ccctcaaattcatatgttaaaatcctaactctcaatgtgttggtattaggaagt-aatccttcaggaggtaattaggtcatgaagatgaagccctcatcaaaggaaagtagtgcccttctaagaagagacacaagaga-gatttttctctcctccatgtgaggataaaatatgacagccatctgtaaaccaggaagacagctttcaccaagaacccaaccatgttgactccctgatttcagatttacagcct i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2231171 270 + 10629787 AGTTATTATGAAC------------------CGCAAAT-------ccctcaaattcatatgttaaaatcctaactttcaatgtgttggtattaggaagt-aatcctttaggaggtaattaggtcatgaagatgaagccctcatcaaaggaaagtagtgcccttctaagaagagacacaagaga-gatttttctctcctccatgtgaggataaaatatgacagccatctgtaaaccaggaagacagccttcaccaagaatccaaccatgttgactccctgatttcagatttacagcct i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24191052 271 + 132174527 ACTTATTTTGAACTGATTATAGTGTGCCCACTGAAAAT-------CCCTCAGATTTATACATTGAAATCCTAACTCTTAATGTGTTGGTA----------------ttgggaggtaatcaggttgtgaagatgaagccctcatcaaaggaaagtagtgcccttctaagaagagacacaa--gg-gatttttttctccatcatgtaagaatacagtaagacagccagctgtaaaccaggaagacagctttcaccaagaacccaaccatgttgactccctagtctcagatttctactct i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10592945 286 - 21366645 ACTTATTTTGAACTGATTATAGTGTGCCCATTGAAAAT-------CCTTCaaatttatatgttgaaatcctaactcttaatgtgttggtattaggaggt-aatcctttgggaggcaatcaggtcatgaagatgaagcccacattaaaggaaagtagtgctcttctaagaagagacacaa--ga-gatttttttctccatcatgtgagagtacagtaagacagccatctgtaaaccaggaagacagctttcaccaagaacccaaccatgttgactccctaatctcagatttctagtct i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3737145 286 - 13033340 ACTTATTTTGAACTGATTATAGTGTACCCACTGAAAAT-------ccctcaaatttatatgttgaaatcctaactcttaatgtgttggtattaggaggt-aatcctttgggaggtaatcaggtcatgaagatgaagccctcatcaaaggaaagtagtgcccttctaagaagagacacaa--ga-gatttttttctccatcatgtgagaatacagtaagacagccatctgtaaaccaggaagacagctttcaccaagaacccaaccatgttgactccctagtctcagatttctagtct i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5228902 286 + 11604778 ACTTATTTTGAACTGATTATAGTGTGCCCACTGAAAAT-------ccctcaaatttctatattgaaatcctaactcttaatgtgttggtattaggaggt-aatcctttgggaggtaatcaggtcatgaagatgaagccctcatcaaaggaaagtagtgcccttctaagaagagacacaa--ga-gatttttttctccatcatgtgagaatacagtaagacagccatctgtaaatcaggaagacagctttcaccaagaacccaatcatgttgactccctaatctcagatttctagtct i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 134784 273 + 36342412 ACTtgttatgaac------------------tgagtatctgtgtgcccccaaattcatatgttgaaatgctaactccgaaggggatggcattaggcagcggagactttgaagggtaattagttcatgagggtggagccctcgtgattgg-catcagtgccctcataagaagatacaagcaagatgatttttcattctgttatgtgaggatacaa---gacagttgtctgtcagccaggtagaga-ccctcacccaagacctaaccatgttgac-acctgatctcagatttccagcct i otoGar3.GL873530 C 0 C 0 e canFam3.chr30 13420836 37 + 40214260 I e dasNov3.JH579377 1809443 560 - 2868945 I a score=2246429.000000 s hg38.chrUn_KI270749v1 20001 229 + 158759 acggatctgtgaaaaacaaatgtttattgtttt----actcaatctgtgtt-ttccgttatagcagcccacattgactaagaAAATACTAAACCCTTTATTTGATAGATAAAGATAGTATCAGACAAGGTATCATATGAGTAAAAACCTAAGATTTATGTGTGATCATTTTACATTGG---AG-------CAGCTACTGAAACTTGAGACC-AAAA-----CCACTAGCTAACATCAGTATGTCAACCCA s panTro5.chr1 101802428 233 - 228573443 acagatctgtgaaaaacaaatgtttattgttttagtcactcaatctgtgtt-ttctgttatagcagcccacattgactaagaAAATACTAAACCCTTTATTTGATAGATGAAGACAGTATCAAGCAAGGTATCATGTGAGTAAAAACCTAAGATTTATGTGTGATCATTTTACATTAG---AG-------CAGCTACTGAAACTTGAGACC-AAAA-----CCACTAGCTAACATCAGTATGTCAACCCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44379564 234 + 99763055 acagatctgtgaaaaccaaatgtttgttgttttagccactcagtctaggtt-ttctgttatagcagcccacattgactaagaAAATACTAAACCCTTTATTTGATAGATGAAGATAGTATCAGACAAGGTATCATATGAGTAAAAACCTAAGATTTATGTGTGATCATTTTACATTGG---AG-------CAGCTACTGAAACTTGAGACCAAAAA-----CCACTAGCTAACATCAGTATGTCAACCCA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 11019 233 - 24701 acagatctgtgaaaaacaaatgtttattgttttactcactcaatctgtgtt-ttccgttatagcagcccacattgactaagaAAATACTAAACCCTTTATTTGATAGATAAAGATAGTATCAGACAAGGTATCATATGAGTAAAAACCTAAGATTTATGTGTGATCATTTTACATTGG---AG-------CAGCTACTGAAACTTGAGACC-AAAA-----CCACTAGCTAACATCGGTATGTCAACCCA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67510085 233 - 121039945 acagatctgtgaaaaccaaatgtttgttgttttagccactcaatctatgtt-ttctgttatagcagcccacactgactaagaAAGTACTAAACCCTTTATTTGATAGATGAAGATAGTATCAGACAAGGTATCATATGAGGAAAAGCCTAAGATTTATGTGCGATCATTTTACATTGG---AG-------CAGCTACTGAAACTTGAGACC-AAAA-----CCACTAGCTAACATCAGTATGTCAACCCA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23418590 233 + 169600520 acagatcgttgaaaaacaaatgtttcttgttttagccacggaatctatttt-ttctgttatagcagcccacattgactaagaAAATACTCAACCCTTTATTTGATAGATGAAGATAGTATCAGACAAGGTATCATATGAGCAAAAACCTAAGATTTATGTGTGATCATTTTACATTGG---AG-------CAGCTACTGAAACTTGAGACC-AAAA-----CCACTAGCTAACATCAGCATGTCAACCCA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24022564 233 + 171882078 acagattggtgaaaaacaaatgtttcttgttttagccacggaatctatttt-ttctgttatagcagcccacattgactaagaAAATACTCAACCCTTTATTTGATAGATGAAGATAGTATCAGACAAGGTATCATATGAGCAAAAACCTAAGATTTATGTGTGATCATTTTACATTGG---AG-------CAGCTACTGAAACTTGAGACC-AAAA-----CCACTAGCTAACATCAGCATGTCAACCCA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13267417 233 - 40200012 acagatcggtgaaaaacaaatgtttcttgttttagccacggaatctatttt-ttctgttatagcagcccacattgactaagaAAATACTCAACCCTTTATTTGATAGACGAAGATAGTATCAGACAAGGTATCATATGAGCAAAAACCTAAGATTTATGTGTGATCATTTTACATTGG---AG-------CAGCTACTGAAACTTGAGACC-AAAA-----CCACTAGCTAACATCAGCATGTCAACCCA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3255206 231 + 7633303 acagattggtgaaaaacaaatgtttcttgttttagccacggaatctatttt-ttctcttatagcagcccacattgactaagaAAATACTCAACCCTTTATTTGATAGATGAAGATAGTATCAGACAAGGTATCATATGAGCAAAAACCTAAGATTTATGTGTGATCATTTTACATT-----AG-------CGGCTACTGAAACTTGAGACC-AAAA-----CCACTAGCTAACATCAGCGTGTCAACCCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21956402 232 - 58131712 acagatcggtgaaaaacaaatgtttcttgttttagccacggaatctatttt-ttctgttatagcagcccacatggactaagaAAATACTCAACCCTTTATTTGATAGATGAAGACAGTATCAGACAAGGTATCATATGAGC-AAAACCTAAGATTTATGTGTGATCATTTTACATTGG---AG-------CAGCTACTGAAACTTGAGACC-AAAA-----CCACTAGCTAACGTCAGCATGTCAACCCA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 51275 232 + 2620224 acagatgggtgaaaaacaaatgtttcttgttttagctacggaatctatttt-ttctgttatagcagcccacattgactaagaAAATACTCAACCCTTTATTTGATAGATGAAGACAGTATCAGACAAGGTATCATATGAGC-AAAACCTAAGATTTATGTGTGATCATTTTACATTGG---AG-------CAGTTACTGAAACTTGAGACC-AAAA-----CCACTAGCTAACATCAGCGTGTCAACCCA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2231441 233 + 10629787 acagatgggtgaaaaacaagtgtttcttgttttagccacggaacctatttt-ttctgttatagcagcccacattgactaagaAAATACTCAACCCTTTATTTGATAGATGAAGATAGTATCAGACAAGGTATCATATGAGCAAAAACCTAAGATTTATGTGTCATCATTTTACACTGG---AG-------CAGCTACTGAAACTTGAGACC-AAAA-----CCACTAGCTAACATCAGCATGTCCGCCCA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24191323 228 + 132174527 acctatctgtgaaaaataaatgtttgctgttgtagccactgaatctatggtattc-----taacagccctcactgactaagaAAATACTCAACTTTTTATTTGATAGATAATGATAGTATCAGACAAGGTATCATATGAGTAAAAACCTAAG-CTTATGGGTGATCATCTTGCCTTGG---AG-------CAGCTACTGAAACTTGAGACT-AAAA-----CTACTAGGTAACATCAGGATGTCAACCCA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10593231 236 - 21366645 acctatctgtgaaaaataaatgtttgctgttttagccacttaatctatggtattctgttataacagcccacactgactaagaAAATACTCAACTTTTTATTTGATAGATGATGATAGTATCAGACAAGGTATCATATGAATAAAAACTTAAG-CTTATGGGTGATCATTTTACATTGGAGCAG-------CAGCTACTGAAACTTGAGACC-AAAA-----CTACTAGGTAACATCAGTATGTCAACCCA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3737431 233 - 13033340 acctatctgtgaaaaataaatgtttgctgttttagccactcaatatatggtattccgttataacagcccacactgactaagaAAATCCTCAACTTTTTATTTGATAGATGATGATAGTATCAGAGAAGGTATCATATGAGTAAAAACCTAAG-CTTATGGTTGATCATTTTACATTGG---AG-------CAGCTACTGAAACTTGAGACC-AAAA-----CTACGAGGTAACATCAGTATGTCAACCCA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5229188 233 + 11604778 acctatctgtgaaaaataaatgtttgctgttttagccactcaatctatggtattctgttataacagcccacactgactaagaAAATACTCAACTTTTTATTTGATAGATGATGATAGTATCAGACGAGGTATCATATGAGTAAAAACCTAAG-CTTATGGGTGATCATTTTACATTGG---AG-------CAGCTACTGAAACTTGAGACC-AAAA-----CTACTAGGTAAGATCAGAATGTCAACCCA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 135057 237 + 36342412 ccatatctgtggaaaataaatggttgttatgtaagccatagaatctttggtattctgttatagcagcccaggttgactaagataGTACTAAACTATTTA-TTAATGGATAAAGATAGTATTAGACAAGGTATCCTATGAATGAAAACCTTGGGGTTATGGG-----ATTTTCCTTTGG---AGCAGACTTCAGCTGCTAAAACTTGAGACC-AAAAAGAAGTAAATAATTAACA--AATATCTCAA-CCA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13420873 97 + 40214260 ACGGTCATGTGAATGATCA---------------------------------TTTTGTTCTAA-AGCAGACTCCAGCTACTAGAATATGAAACC-----------------AAAAAGTACTAGGCACATTATC------------------------------------------------AG-------CATATA------------AAT-AAAA---------------------------------- i canFam3.chr30 I 37 C 0 e dasNov3.JH579377 1809443 560 - 2868945 I a score=4036969.000000 s hg38.chrUn_KI270749v1 20230 355 + 158759 AAACATTTGGGACAGTAATGAAGATACAGCA--AATGAAT-----TGTTTTAATA--TATAATCAAGTCAAAGTTATCCTCAGAATT-ATAGG-AAAAAATCCACTAAATTTGGTTT-ATGAGAAATTCATGGTTCATTGTATACCTTGATACTGGGCTTAAAGCAGCAATCCTAATTCCAGATCTACCTTCAAGTCT-GGGTCAGTGTTCTCAAATGCTGCCAGTTTCATGTCAGGACCGGCTTAATATTGAAGGTAAC--TG---AGCATTGCTAATGTCTGACTGGAGCTGAAAGAGGCC---AAAAGCAGGGTTATAACTTTGGGAAAACTGACCTGGTGTTAACTTCCATGCCTT---------------C--------CATTTCAAACGGGAA- s panTro5.chr1 101802661 354 - 228573443 AAACATTTGGGACAGTAATGAAGATACAGCA--AAGGAAT-----TGTTTTAATA--TATAATCAAGGCAAAGTTATCATCAGAATT-ATAGG-AAAAAATCCACTAAATTTGGTTT-ATGAGAAATTCGTGATTCATTGTATACCTTGATACTGGGCTTAAAGCAGCAAACCTAATTCCAGATCTACCTTCAAGTCT-GGGTCAGTGTTCTCAAATGCTGCCAGTTTCATGTAAGGACTGGCTTAATATTGAAGGTAAC--TG---AGCATTGC-AATGTCTGACTGGAGCTGAAAGAGGCC---AAAAGCAGGGTTATAACTTTGGGAAAACTGACCTGGTGTTAACTTCCTTACCTT---------------C--------CATTTCAAATGGGAA- i panTro5.chr1 C 0 C 0 s panPan2.chr15 44379798 355 + 99763055 AAACATTTGGGACAGTAATGAAGATACAGCA--AATGAAT-----TGTTTTAATA--TATAATCAAGGCAAAGTTATCATCAGAATT-ATAGA-AAAAAATCCACTAAATTTGGTTT-ATGAGAAATTCATGATTGATTATATACCTTGATACTGGGCTTAAAGCAGCAATCCTAATTCCAGATCTACCTTCAAGTCT-GAGTCAGAGTTGTCAAATGCTGCCAGTTTCATGTCAGGACTGGCTTAATATGGAAGGTAAC--TG---AGCATTGCTAATGTCTGACTGAAGCTGAAAGAGGTC---AAAAGCAGGGTTATAACTTTGGGAAAACTGTCCTGGTGTTAACTTCCATCCCTT---------------T--------CATTTCAAATGGGAA- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 11252 356 - 24701 AAACATTTGGGACAGTAATGAAGATACAGCA--AATGAAT-----TGCTTTAATA--TATAATCAAGGCAAAGTTATCCTCAGAATT-ATAGGAAAAAAATCCACTAAATTTGGTTT-ATGAGAAATTCATGATTCATTGTATACCTTGATACTGGGCTTAAAGCAGCAATCCTAATTCCAGATCTACCTTCAAGTCT-GGGTCAGTGTTCTCAAATGCTGCCAGTTTCATGTCAGGACCGGCTTAATATTGAAGGTAAC--TG---AGCATTGCTAATGTCTGACTGGAGCTGAAAGAGGCC---AAAAGCAGGGTTATAACTTTGGGAAAACTGACCTGGTGTTAACTTCCATCCCTT---------------C--------CATTTCAAACGGGAA- i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67510318 356 - 121039945 AAACATTTGGGACAGTAATGAAGATACAGCA--AATGAAT-----TGTTTCAATA--TATAATCAAGGCAAAGTTATCATCAGAATT-ATAGAAGAAAACTCCACTAAATTTGGTTT-ATGAGAAATTCATGATTCATTGTATACCTTGATACTGGGCTTAAAGCAGCAATCCCAATTCCAGATCTACCTTCAAGTCT-GAGTCAGTGTTCTCAAATGCTGCCAGTTTCATGTCAGGACTGGCTTAATATTGAAGGTAAC--TG---AGCATTGCTAATGTCTGACTGAAGCTGAAAGAGGTC---AAAAGCAGGGTTATAACTTTGAGAAAACTGATCTGGTGTTAACTTCCATCCCGT---------------T--------CATTTCAAATAGGAA- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23418823 356 + 169600520 AAACATTTGGGACAGTAATGAAGATACCGCA--AATGAGT-----TGTTTTAATA--TATAATCAAGACAAAGTTATCATCAGAATT-ATAGGAAAAAAATCCACTAAATTTAGTTT-ATGAGAAATTCATGATTCATTGTATACCTTGATACTGGGCTTAAAGCAGCAATCCTAATTCTAGATCTACCTTCAAGTCT-GGGTCAGAGTTCTCAAATGCTGCCAGTTTCATGTCAGGACTGGCTTAATATTGAAGGTAAC--TG---AGCATTGCTAATATCTGACTGAAGCTGAAAGAGGTA---AAAATCAGGGTTATGACTTTGGGAAAACTGACCTGGTGTCAACCTCCATCCCTT---------------T--------CATTTCAAATGGGAA- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24022797 356 + 171882078 AAACATTTGGGACAGTAATGAAGATACCGCA--AATGAGT-----TGTTTTAATA--TATAATCAAGACAAAGTTATCATCAGAATT-ATAGGAAAAAAATCCACTAAATTTAGTTT-ATGAGAAATTCATGATTCATTGTATACCTTGATACTGGGCTTAAAGCAGCAATCCTAATTCTAGATCTACCTTCAAGTCT-GGGTCAGAGTTCTCAAATGCTGCCAGTTTCATGTCAGGACTGGCTTAATATTGAAGGTAAC--TG---AGCATTGCTAATATCTGACTGAAGCTGAAAGAGGTA---AAAATCAGGGTTATGACTTTGGGAAAACTGACCTGGTGTCAACCTCCATCCCTT---------------T--------CATTTCAAATGGGAA- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13267650 356 - 40200012 AAACATTTGGGACAGTAATGAAGATACCGCA--AATGAGT-----TGTTTTAATA--TATAATCAAGACAAAGTTATCATCAGAATT-ATAGGAAAAAAATCCACTAAATTTAGTTT-ATGAGAAATTCATGATTCATTGTGTACCTTGATACTGGGCTTAAAGCAGCAATCCTAATTCTAGATCTACCTTCAAGTCT-GGGTCAGAGTTCTCAAATGCTGCCAGTTTCATGTCAGGACTGGCTTAATATTGAAGGTAAC--TG---AGCATTGCTAATATCTGACTGAAGCTGAAAGAGGTA---AAAATCAGGGTTATAACTTTGGGAAAACTGACCTGGTGTCAACCTCCATCCCTT---------------T--------CATTTCAAATGGGAA- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3255437 356 + 7633303 AAACATTTGGGACAGTAATGAAGATACTGCA--AATGAGT-----TGTTTTAATA--TATAATCAAGACAAAGTTATCATCAGAATT-ATAGGAAAAAAATCCACTAAATTTAGTTT-ATGAGAAATTCATGATTCATTGTATACCTTGATACTGGGCTTAAAGCAGCAATCCTAATTCTAGATCTACCTTCAAGTCT-GGGTCAGAGTTCTCAAATGCTGCCAGTTTCATGTCAGGACTGGCTTAATATTGAAGGTAAC--TG---AGCATTGCTAATATCTGACTGAAGCTGAAAGAGGTA---AAAATCAGGGTTATAACTTTGGGAAAACTGACCTGGTGTCAACCTCCATCCCTT---------------T--------CATTTCAAATGGGAA- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21956634 356 - 58131712 AAACATTTGGGACAGTAATGAAGATACTGCA--AATGAGT-----TGTTTTAATA--TATAATCAAGACAAAGTCATCATCAGAATT-ATAGGAAAAAAATCCACTAAATTTAGTTT-ATGAGAAATTCATGATTCATTGTATACCTTGATACTGGGCTTAAAACAGCAATCCTAATTCCAGATCTACCTTCAAGTCT-GGGTCAGAGTTCTGAAATGCTGCCAGTTTCATGTCAGGACTGGCTTAATATTGAAGGTAAC--TG---AGCATTGCTAATATCTGACTGAAGCTGAAAGAGGTA---AAAATCAGGGTTATAACTTTGGGAAAACTGACCTGGTGTCAACCTCCATCCCTT---------------T--------CATTTCAAATGGGAA- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 51507 356 + 2620224 AAACATTTGGGACAGTAATGAAGATACCGCA--AATGAGT-----TGTTTTAATA--TATAATCAAGACAAAGTTATCATCAGAATT-ATAGGAAAAAAATCCACCAAATTTAGTTG-ATGAGAAATTCATGATTCATTGTATACTTTGATACTGGGCTTAAAGCAGCAATCCTAATTCCAGATCTACCTTCAAGTCT-AGGTCAGAGTTCTCAAATGCTGCCAGTTTCATGTCAGGACTGGCTTAATATTGAAGGTAAC--TG---AGCATTGCTAATATCTGACTGAAGCTGAAAGAGGTA---ATAATCAGGGTTATAACTTTGGGAAAACTGACCTGGTGTCAACTTCCATCCCTT---------------T--------CATTTCAAATGGGAA- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2231674 356 + 10629787 AAACATTTGGGACAGTAATGAAGGTACCGCA--AATGAGT-----TGTTTTAATA--TATAATCAAGACAAAGTTATCATCAGAATT-ATAGGAAAAAAATCCACTAAATTTAGTTT-ATGAGAAATTCATGATTCATTGTATACCTTGATACTGGGCTTAAAGCAGCAATCCTAATTCCAGATCTACCTTCAAGTCT-GGGTCAGAGTTCTCAAATGCTGCCAGTCTCATGTCAGGACTGGCTTAATATTGAAGGTAAC--TG---AGCATTGCTAATATCTGACTGAAGCTGAAAGAGGTA---AAAATCAGGGTTATAACTTTGGGAAAACTGACCTAGTGTCAACTTCCATCCCTT---------------T--------CATTTCAAATGGGAA- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24191551 355 + 132174527 AAACATTTGGGACAATAAAGAAGATACAGCA--AAT-AGT-----TGTATTAATG--TGCAATCAAGGCAAAGTTATAATCAGAATT-ATAGG--AAAAATTCACTAAGTTTGGTTG-ATGAGAAATTCATGATTTATTGTGTACCTTGATACTGGGCTTAAAGCGGCAATCCTAATTCCAGATCTACCTTCAAGTCT-GGATCAGTGTTTTCAAATGCTGCCAGTTTCATTTCAGAACTGGCTTAATATTGAAGGTAACTGTG---AGCAGTGCTAATGTCTGTCTGAATCTGAAAGAGGTC---AAAAGCAGGGTTATAACTTCGGGAAAATTTACACAGGGTTAACATCCATCCCTT---------------T--------CATTTCAAATGGGAA- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10593467 354 - 21366645 AAACATTTGGGACAATAAAGAAGATACAGCA--AAT-AGT-----TGTATTAATG--TGCAATCAAGGCAAAGTTATAATCAGAATT-ATAGG-AAAAAATTCACTAAATTTGGTTG-ATGAGAAATTCATGATTTATTGTGTACCTTGATATTGGGCTTAAAGGGGCAATCCTAATTACAGATCCACCTTCAAGTCT-AGGTCAGTGTTCTCAAATGCTGCCAGTTTCATTTCAGGATTGGCTTAATATTGAAGGTAAC--TG---AGCAGTGCTAATGTCTGTCTGAATCTGAAAGAGGTC---AAAAGCAGGGTTATAACTTTGGGAAAACTTACCTGGGGTTAACATTCATCCCTT---------------T--------CATTTCAAATGGGAA- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3737664 354 - 13033340 AAGCATTTGGGACAATAAAGATGATACAGCA--AAT-AGT-----TGTATTAATG--TGCAATCAAGGCAAAGTTATAATCAGAATT-ATAGG-AAAAAATTCACTAAATTTGGTTG-ATGAGAAATTCATGATTTATTGTGGACCTTGATATTGGGCTTAAAGCAGCAATCCTAATTACAGATCTACCTTCAAGTCT-GGGTCAGTGTTCTCAAATGCTGCCAGTTTCATTTGAGGACTGGCTTAATATTGAAGGTAAC--TG---AGCAGTGCTAATGTCTGTCTGAATCTGAAAGAGGTC---AAAAGCAGGGTTATAACTTTGGGAAAACTTACCTAGGGTTAACATCCATCCCTT---------------T--------CATTTCAAATAGGAA- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5229421 353 + 11604778 ----ATTTGAGACAATAAGGAAGATACAGCA--AAT-AGT-----TGTATTAATG--TGCAATCAAGGCAAAGTTATAATCAGAATT-ATAGG-AAAAAATTCACTAAATTTTGTTG-ATGAGAAATTCATGATTTATTGTGTAACTTGATATTGGGTTTAAAGCGGCAATCCTAATTCCAGATCTACCTTCAAGTCC-GGGTCAGTGTTCTCAAATGCTGCCAGTTTCATTTCAGGACTGGCTTAATATTGAAGGTAAC--TGAGCAGCAGTGCTAATGTCTGTCTGAATCTGAAAGAGGTC---AAAAGCAGGGTTATAACTTTGGGAAAACTTACCTGGGGTTAACATCCATCCCTT---------------T--------CATTTCAAACGGGAA- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 135294 332 + 36342412 AAACATCTGGGGCAGAAATGCAAATCTAGTGGCAATGGGTGGGTGTGTATTAACA--TGTAATAAAGGCAAAAGTATAATCATAATT-ACAGT---GAAATCCACTGGACTAGATTC-ACAAGAAATCCATGATTCATTATATAACTGGATGCTTGACTTAAAGCACCAATCCTAATTCTAGATCTGCCTTCAGATATGGGGTCACTCTTTTCAAATGCTGCCAGCCTTACATCACAAATGGCTTAATGTTAAAGATAGT--TG---AGCA-TGTAGGTGTCTGCCTAGTTCTGAAAGAGGTC---AGAA---------------------------------GTTTACCT---TCTCTT---------------TGATTAGGGCATTTCAAATGGGAA- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13420970 349 + 40214260 AAACATTTGGTACAGTAATGTAGATCCAGCA--GGGGAAT-----TGTGTTAACA--TGTAATCAAGACAAAA-TATAACCATAACTAATAGG---AAAACTCACTAGACTTGGTTC-ATGAGAAATCTAGGATCCATTGTGTACCTTGATACTGGATGTAAAGCAG-AATCCTAATCCTAGAACTGCC-TCAAGTGT-GCTTCCATCTTCTCAAATGCTTCTAGCCTTTGATAGGGACTGGCTTAGTAATAAAGGTAGT--CT---AGCA-TACAGATAATTGCCTGGAGCAGAAATAAGCCAGGAGAAGCAGGATTCTATTCTTGGAAAAGCTGACCTGGAGTTAATATCCTTCC---------------------------TATTTCAAATGGGAA- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1810003 354 - 2868945 agacaatggagggaggggagagaaataaata--aataaat-----cttTTTAAAAAGTGTAACAAAACAAAAATTATGATCTTAACT-ACTTG--GAAAATCCACTAGGCTTGGTTCAATGAGAAATCTTTGATGCATTATGTACCCTGAATCTGGACATAGAGC---AATCCTAATTCCAAAGCTGCTGT-ACTTCT-GAATCAGTCTCCTCAGCTGCTGCCAGCCCT----------TGGTCTAATACTGCAGGTAGT--TG---AGCA-TGCAGGTATCTGCCCATAGTTTAAAGAGGCCAGGAGAAACAAGACTCTAACCTTGCAAAA-----TCTGGGATTTGCACTCTTTCCTTGGCTTTTGCTATTTGT--------TACTTC--CTTGGAAG i dasNov3.JH579377 I 560 C 0 a score=573495.000000 s hg38.chrUn_KI270749v1 20585 63 + 158759 GGTATCACAATTAGAAGCTATTAACAGTC-TTATCTA----ATAAATTGTGGATAAtttctttttttt s panTro5.chr1 101803015 63 - 228573443 AGTATTGCAATTAGAAGCTATTAGCAGTC-TTATCTA----ATAAGTTGTGGATAATTCCtttttttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44380153 63 + 99763055 GTTATCACAATTATAAGCTATTAGCAGTCTTTATCTA----ATAACTTGTGGATAATTCCCtctttt- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 11608 63 - 24701 GGTATCACAATTAGAAGCTATTAACAGTC-TTATCTA----ATAAATTGTGGATAATTCCtttttttt i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67510674 63 - 121039945 GGTATCACAATTATAAGCTATTAGCAGTCTTTATCTA----ATAACTTGTGGATAATTCCttttttt- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23419179 60 + 169600520 GGTATCACAATTATAAGCTATTAGCAGTC----TTTA----ATAACTTGTGGATAATTTCtttttttt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24023153 60 + 171882078 GGTATCACAATTTTAAGCTATTAGCAGTC----TTTA----ATAACTTGTGGATAATTTCtttttttt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13268006 60 - 40200012 GGTATCACAATTATAAGCTATTAGCAGTC----TTTA----ATAACTTGTGGATAATTTCtttttttt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3255793 60 + 7633303 GGTATCACAATTATAAGCTATTAGCAGTC----TTTA----ATAACTTGTGGATAATTTCtttttttt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21956990 60 - 58131712 GGGATCACAATTATAAGCTATTAGCAGTC----TTTA----ATAGCTTGTGGATAATTTCtttttttt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 51863 60 + 2620224 GGTATCACAATTATAAGCTATTAGCAGTC----TTTA----ATAACTTGTGGATAAtttctttttttt i manLeu1.NW_012108674v1 C 0 I 3 s colAng1.NW_012121598v1 2232030 60 + 10629787 GGTATCACAATTATAAACTATTAGAAGTC----TTTA----ATAACTTGTGGATAATttctttttttt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24191906 60 + 132174527 GGTAGCACAATTATAAGTTATTAGCAGTT----TTTA----ATAGCTTGTGGATAATTCATTCATTAT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10593821 60 - 21366645 GGTAGCACAATTATAAGCTATTAGCAGTC----TTTA----ATAACTTGTAGATGattaatttattat i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3738018 60 - 13033340 GGTGGCACAATTATAAGCTATTAGCAGTC----TTTA----ATAACTTGTGGATAATTCAtttattat i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5229774 60 + 11604778 GGTAGCACAATTATAAGCTATTAGCAGTC----TTTA----ATAACTTGTGGGTAATTTAtttattat i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 135626 57 + 36342412 AG----ACA--TGTAGATAATTGACAGTC----TTTATCC-ATTACTTATGGGAAATTCCTTTCATTT i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1810357 64 - 2868945 GCTGGCACAATTGCAAGCTGTTAATAGTC----TTTACCCAATAACTTATGGATAATTCCTTTTTATT i dasNov3.JH579377 C 0 C 0 e canFam3.chr30 13421319 0 + 40214260 C a score=1480.000000 s hg38.chrUn_KI270749v1 20648 1 + 158759 t s panTro5.chr1 101803078 1 - 228573443 t i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005671v1 11671 1 - 24701 t i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr7 23419239 1 + 169600520 c i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24023213 1 + 171882078 c i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13268066 1 - 40200012 c i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3255853 1 + 7633303 c i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21957050 1 - 58131712 c i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 51926 1 + 2620224 t i manLeu1.NW_012108674v1 I 3 C 0 s colAng1.NW_012121598v1 2232090 1 + 10629787 c i colAng1.NW_012121598v1 C 0 C 0 s dasNov3.JH579377 1810421 1 - 2868945 T i dasNov3.JH579377 C 0 C 0 e otoGar3.GL873530 135683 0 + 36342412 C e aotNan1.NW_018501505v1 5229834 0 + 11604778 C e cebCap1.NW_016107324v1 3738078 0 - 13033340 C e canFam3.chr30 13421319 0 + 40214260 C e saiBol1.JH378136 10593881 0 - 21366645 C e calJac3.chr10 24191966 0 + 132174527 C e nomLeu3.chr6 67510737 0 - 121039945 C e panPan2.chr15 44380216 0 + 99763055 C a score=7493315.000000 s hg38.chrUn_KI270749v1 20649 806 + 158759 tttcttt-----ttttttaagagtcagggtctcactctgtcacctaggctggagtgca-----gttgtgcaattgttacggaatctttggggtgtcgattttctggtttggaaa---ctgtggttggtggcatctttgcccgagttcttgtcctgcttccaggaagaatggtgtaggtagacaagtgaagggttaaaggagaggagctttattaggtgttagaacagctcagaggagacccatagtgggtagctcctctc--taggttgttctgtcaagtgttcagctctcaggagaaagggaaaccctggagaggtttgctcctgtctgcagctggtagttcccagacatctctgcaggtctctgaagcattcagcagagaaaacagc-------------tggccctcccattgtctccagctatcagcagaaaggatagctccttcctgcctctaatcttccctcctctgtcttctgccctgttctggctgagtcctgggcttttatggatgtcagaggggaggaaatgtatgcccattggtccatgggcagccatgggcgggcccaggaaaaagcaccatgagttttgcctccagtctgcaggactggcagcctagcctgcaggtggggcttcactggggactcatcaccttccacccaggagcctgtctgcctcccacaaccatccatggcacccaggctgctggcatcaaggggcacttgcaggccagtgccaagccaccctcggaccccctcatcttcccctcccatgctcctgcttctcagtgttcaaagtccagaaggggctgaggtggcaggggactggcatgt s panTro5.chr1 101803079 801 - 228573443 ----tct-----ttttttaagagtcagggtctcactctgtcacctaggctggagtgca-----gtggtgcaattgttacagaatctttggggtgtcgattttctggttggaaaa---ctgtggttggtggcatctttgcccgagttcttgtcctgcatcca-gaagaatggtgtaggtagacaagtgaagggttaaaggagaggagttttattaagtgttagaacagctcagaggagacccatagtgggtagctcctcta--taggttgttctgtcaagtgttcagctctcagcagaaagggaaaccctggagaaggttgctcctgtctgcagctagtagttcccagacaactctgcaggtctctgaagcattcagcagagaaagtagc-------------tggccttcccattgtatccagctatcagcagaaaggatagctccttcctgcctctagtcttccctcctctgtcttctgccctgttctggctgagtcctgggcttttatggacgtcagaggagaggaagtgtatgctcattggtccatgggcagccatgggtgggcccaggaaaaagcaccataagttttgcctccagtctgcagaactggcagcctagcctgcaggtggggcttcactggggacctctccccttccacccaggagcctgtctgcctcccacagccatccatggcacccaggctgctggcatcaaggggcacttgcaggccagtgcccagccaccctcagaccccctcagcttcccttcccatgcttctgctcctcggtgtccaaagtccagaggggactgaggtgacaggggattggcatgt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44380216 805 + 99763055 ----tct-----ttttttaagagtcaggatctcactctgtcacctagactggagtgca-----gtggtgcaattgttacagaatctttggggtgtcgattttctggttggaaacct-ctgtggttggtggcatctttgccccagttcttgtcctgcatccaggaagaatggtgtaggtagaaaagtgaagggtgaaaggagaggagctttattaagtgtcagaacagctccgaggagacccatagtgggtagctcctctctgtaggttgttctgtcgagtgttcagctctcagcagaaagggaagcaatggagagggttgctcctgtctgtacctggtagttcccagacatctctgcaggtctctgaagcattcagcagagaaaatagc-------------tggccctttcattgtctccagctattagcagaaaggatagctcctttctgcatctagtcttccctcctctgtcttctgccctgttctggctgagtcctgggcttttatggatgtcagaggggaggaagtgcatgcccattggtccatgggcagccatgggcgggcccaggaaaaagcaccatgagtttcccctctagtctgcaggactggcagcctagcctgcaggtgggccttcactgaggacccacccccttccacccaggaacctgtctgcctcccacagccatccatggcacccaggcttctggcctcaaggggcacttgcaggccagtgcccagccaccctcagatcccctcagcttcccctcccatgctcctgctcctcagtgttcaaagttcagagggggctgaggtggt-gggggctggcatgt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 11672 799 - 24701 ----tct-----ttttttaagagtcagggtctcactctgtcacctaggctagagtaca-----gttgtgcaattgttacagaatctttggggtgtcgattttctggttggaaaa---ctgtggttggtggcatctttgcccgagttcttgtcctgcatcca-gaagaat-gtgtaggtagacaagtgaagggttaaaggagaggagctttattaagtgttagaacagctcagaggagacccatagtgggtagctcctctc--taggttgttctgtcaagtgttgagctctcagcagaaagggaaaccctggagagggttgctcctgtctgcagctggta-ttcccagacatctctgcaggtctctgaagcattcagcagagaaaatagc-------------tggccctcccattgtctccagctatcagcagaaaggatagctccttcctgcctctagtcttccctcctctgtcttctgccctgttctggctgagtcctgggcttttatggatgtcagaggggaggatgtgtatgcccattgatccatgggcagccatgggcgggcccaggaaaaagcaccatgagttttgcctccagtctgcaggactggcagcctagcctgcaggtggggcttcactggggacccatccccttccacccaggagcctgtctgcctcccacagccatccatggcacccaggctgctggcatcaaggggcacttgcaggccagtgccaagccaccctcggaccccctcatcttcccctcccatgctcctgctcctcggtgtccaaagtccagagggggctgaggtggcaggggactggcatgt i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67510737 806 - 121039945 ----tct-----ttttttaagagtcagggtctcactctgtcacctaggctggagtgca-----gtggtgcaattgttacagaatctttggggtgtcgattttctggttggaaacct-ctgtggttggtggcatctttgcctgagttcttgtcctgcatccaggaagaatggtgtaggtagacaagtgaagggtgaaaggagaggagctttgttaagtgttagaacagctccgaggagacccatagtgggcagctcctctctgtaggttgttctgtcgagtgttcagctctcagcagaaagggaagccctggagagggttgcttctgtctgcagctagtagttcccagacatctctgcaggcctctgaagcattcagcagagaaagtagc-------------tggccctctcattgtctccagctattagcagaaaggatagctcctttctgcatctagtcttccctcctctgtcttctgccctgttctggctgagtcctgggcttttatggatgtcagaggggaggaagtgtatgcccattggtccatgggcagcgatgggtgggcccaggaaaaagcaccatgagtttcccctccagtctgcaggactggcagtttagcctgcaggaggggcttcactggggacccacccccttccacccaggagcctgtctgcctcccacagccatccatggcaaccaggctgctggcatcaaggggcacttgcaggccagtgcccagccaccctcagaccccctcagcttcccctcccatgctcctgctcctcagtattcaaagttcagagggggctgaggtggcagggggctggcatgt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23419240 802 + 169600520 ----ttt-----ttttttaagagtcagggt----ctctgtcacctaggctggagtgca-----gtggtgcaattgttacagaatctttggggtgtcgattttctggttggaaacctcttgtggttcgtggcatctttgcccgagttcttgtcctgcatccaagaagaatggtgtaggtagacaagtgaagggtgaatagagaggagctttattaagtgttagaacagcttagaggagacccatagtgggtagctcctctctgtaggttgttttgccaagtgttcagctctcagcagaaagggaaaccctggagagggttgctcctctctgtagctgatagttcccagacatctctgtagctctctgaagcattcagcagagaaagtagc-------------tggccctcccattgtctccagctatcagcagagagggtagctcctttctgcagctagtcttccctcctctgtcttctgccctgttctggctgagtcctaggcttttatggacatcagagggaaggaagtgtatgcccattggtccatgggcagccatgggtgggcccaggaaaaagcaccctgagtttcccctccagtctgcaggactggcagcctagcctgcaggtggggcttcactggggacccacctccttccacccaggagcctgtctgcctcccacagccatccatggcacccagactgctggcatcaaggggcacttgtaggccagtgccaagtcaccctcaga-ccccacagcttcccctcccatgctcctgctcctcagtgcccaaagtccagaggaggctgaggtggcagggggctggcatgt i rheMac8.chr7 C 0 I 6 s macFas5.chr7 24023214 802 + 171882078 ----ttt-----ttttttaagagtcagggt----ctctgtcacctaggctggagtgca-----gtggtgcaattgttacagaatctttggggtgtcgattttctggttggaaacctcttgtggttcgtggcatctttgcccgagttcttgtcctgcatccaagaagaatggtgtaggtagacaagtgaagggtgaatagagaggagctttattaagtgttagaacagcttagaggagacccatagtgggtagctcctctctgtaggttgttttgccaagtgttcagctctcagcagaaagggaaaccctggagagggttgctcctctctgtagctgatagttcccagacatctctgtagctctctgaagcattcagcagagaaagcagc-------------tggccctcccattgtctccagctatcagcagagagggtagctcctttctgcagctagtcttccctcctctgtcttctgccctgttctggctgagtcctaggcttttatggacatcagagggaaggaagtgtatgcccattggtccatgggcagccatgggtgggcccaggaaaaagcaccctgagtttcccctccagtctgcaggactggcagcctagcctgcaggtggggcttcactggggacccacctccttccacccaggagcctgtctgcctcccacagccatccatggcacccagactgctggcatcaaggggcacttgtaggccagtgccaagtcaccctcaga-ccccacagcttcccctcccatgctcctgctcctcagtgcccaaagtccagaggaggctgaggtggcagggggctggcatgt i macFas5.chr7 C 0 I 3 s macNem1.NW_012010577v1 13268067 802 - 40200012 ----ttt-----ttttttaagagtcagggt----ctctgtcacctaggctggagtgca-----gtggtacaattgttacagaatctttggggtgtcgattttctggttggaaacctctcgtggttcatggcatctttgcccgagttcttgtcctgcatccaagaagaatggtgtaggtagacaagtgaagggtgaatagagaggagctttattaagtgttagaacagcttagaggagacccatagtgggtagctcctctctgtaggttgttttgccaagtgttcagctctcagcagaaagggaaaccctggagagggttgctcctctctgtagctgatagtttccagacatctctgtagctctctgaagcattcagcagagaaagtagc-------------tggccctcccattgtctccagctatcagcagagagggtagctcctttctgcagctagtcttccctcctctgtcttctgccctgttctggctgagtcctaggcttttatggacatcagagggaaggaagtgtatgcccattggtccatgggcagccatgggtgggcccaggaaaaagcaccctgagtttcccctccagtctgcaggactggcagcctagcctgcaggtggggcttcactggggacccacctccttccacccaggagcctgtctgcctcccacagccatccatggcacccagactgctggcatcaaggggcacttgtaggccagtgccaagtcaccctcaga-ccccacagcttcccctcccatgctcctgctcctcagtgcccaaagtccagaggagactgaggtggcagggggctggcatgt i macNem1.NW_012010577v1 C 0 I 6 s cerAty1.NW_012000887v1 3255854 800 + 7633303 ----ttt-----ttttttaagagtcagggt----ctctgtcacctaggctggagtgca-----gtggtgcaattgttacagaatctttggggtgtcgattttctggttggaaacctcttgtggttcgtggcatctttgcccgagttcttgtcctgcatcc-agaagaatggtgtaggtagacaagtgaagggtgaatagagaggagctttattaagtgttagaacagcttagaggagacccatagtgggtagctcctctctgtaggttgttttgccaagtgttcagctctcagcagaaagggaaaccctggagagggttgctcctctctgtagctgatagttcccagacatctctgtagctctctgaagcattcagcagagaaagtagc-------------tggccctcccattgtctccagctatcagcagagagggtagctcctttctgcagctagtcttccctcctctgtcttctg-cctgttctggctgagtcctaggcttttatggacatcagagggaaggaagtgtatgcccattggtccatgggcagccatgggtgggcccaggaaaaagcaccctgagtttcccctccagtctgcaggactggcagcctagcctgcaggtggggcttcactggggacccacctccttccacccaggagcctgtctgcctcccacagccatccatggcacccagactactggcatcaaggggcacttgtaggccagtgccaagtcaccctcaga-ccccacagcttcccctcccatgctcctgctcctcagtgcccaaagtccagaggaggctgaggtggcagggggctggcatgt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21957051 802 - 58131712 ----ttt-----ttttttaagagtcagggt----ctctgtcacctaggctggagtgca-----gtggtgcaattgttacagaatctttggggtgttgattttctggttggaaacctcttgtggttcgtggcatctttgcccgagttcttgtcctgcatccaagaagaatggtgtagggagacaagtgaagggtgaatagagaggagctttattaagtgttagaacagcttagaggagacccatagtgggtagctcctctctgtaggttgttttgccaagtgttcagctctcagcagaaagcgaaaccctggcgagggttgctcctctctgtagctggcagttcccagacatctctgtagctctctgaagcattcagcagagaaagtagc-------------tggccctcccattgtctccagctatcagcagagaaggtagctcctttctgcagctagtcttccctcctctgtcttctgccctgttctggctgagtcctagtcttttatggacatcagagggaaggaagtgtatgcccattggtccatgggcagccatgggtgggcccaggaaaaagcaccctgagtttcccctccagtctgcaggactggcagcctagcctgcaggtggggcttcactggggacccacctccttccacccagcagcctgtctgcctcccacggccatccatggcacccagactgctggcatcaaggggcacttgtaggccagtggcaagtcaacctcaga-cccctcagcttcccctcccatgctgctgctcctcagtgcccaaagtccagaggaggctgaggtggcagggggctggcatgt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 51927 802 + 2620224 ----ttt-----ttttttaagagtcagggt----ctctgtcacctaggctggagtgca-----gtggtacaattgttacagaatctttggggtgtcaattttctggttggaaacctcttgtggttcgtggcatctttgcccgagttcttgtcctgcatctaagaagaatggtgtaggtagacaagtgaagggtgaatagagaggagctttattaagtgttagaacaacttagaggagacccatagtgggtagctcctctctgtaggctgttttgccaagtgttcagctctcagcagaaagggaaaccctggagagggttgctcctctctgtagctgatagttcccagacatctctgtagctctctgaagcattcagcagaggaagtagc-------------tggccctcccattgtctccagctatcagcagagagggtagctcctttctgcagctagtcttccctcctctgtcttctgccctgttctggctgagtcctaggcttttatggacatcagagggaaggaagtgtatgcccattggtccatgggcagccatgggtgggcccaggaaaaagcaccctgagtttcccctccagtctgcaggactggcagcctagcctgcaggtggggcttcactggggacccacctccttccacccaggagcctgtctgcctcccacagccatccatggcacccagactgctggcatcaaggggcacttgtaggccagtgccaagtcaccctcaga-ccccacagcttcccctcccatgctcctgctcctcagtgcccaaagtccagaggaggctgaggtggcagggggctggcatgt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2232091 801 + 10629787 -----tt-----ttttttaagagtcagggt----ctctgtcacctaggctggagtgca-----gtggtgcgattgttacagaatctttggggtgttgattttctggttggaaacctcttgtggttcgtggcatcttggcctgagttcttgtcctgcatccaagaagaatggtgtaggtagacaagtgaagggtgaatagagaggagctttattaagtgttagaacagcttagagaagactcatagtggatagctcctctctgtaggttgttttgtcaagtgttcagctctcagcagaaagggaaaccctggagagggttgctcctctctgcagctgttagttccgagacatctctgtagctctctgaagcattcagcagagaaagtagc-------------tggccctcctattgtctccagctatcagcagagagggtagctcctttctgcagctagtcttccctcctctgtcttctgccctgttctggctgagtcctggccttttatggacatcagagggaaggaagtgtatgcccattggtccatgggcagccatgggtgggcccaggaaaaagcaccatgagtttcccctccagtctgcaggactggcagcctagcctgcagatggggcttcactggggacccacccccttgcacccaggagtctgtctgccttccacagccatccatgtcacccagactgctggcatcaaggggcacttgtaggccagtgcccagtcaccctcaga-cccctcaacttcccctcccatgctcctgctcctcagtgcccaaagtccagaggaggctgaggtggcagggggttggcatgt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24191966 816 + 132174527 ----TATTATTAttttttaagagtcagggtctcagtctgtcacccatgctagagtacagAATTGCTGGGCAATtgttacggaatctttgggatgtcaatattctagctggaaacct-atgtggcagggggagcctttgcctgagctcttatcctgcatccaagaagaatggagtaggcagaaaagttaataaggaataaagaggagctatattaagtgttagaacagctcaaatgagacccatagtgggtagctcctttctgtaggtcatcctgtcaggtgttcagctctc-gcagaaaaggaagccctggagagggttgctcctctctgcagctggtagtccccagacatc-ctgcaggtctctgaagcacttagcagagagggtagttcctctctgcacctggccctc-cattctctccagctatcagcagagagggtagctcctctctgcagctagtcttccctcctctgtcttctgccatgctccagctgaatcctgggc-tttatggatatcagaggggaggacatgtgtgtccattgagccatgggcagccatgggtgggccaaggaaaaagcaccatgaatttcccctctagtctgcagga--------ctagcctgaagcagaaattttact-gggacccacccacttccacccaggagcctgtctgcctcccaggtccatccataccacccaggctgctggcatcaaggggcacctgcaggccagtgcccaggcaccctcagatcccctcagcttcccctcccacacttctgcttctcagtgcccaaaatccagaggtggttgaggtaccaggaggctggcatgt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10593881 821 - 21366645 ----tat-----ttatttaaGAGTCAGGGTCTCAGTCTGTCACACATGCTGAAGTATAGAATTGCTGGGCAATtgttacggaatctttgggatgtcaattttctggctgaaaacct-atgtggcaggtggagcctttgcctgagctcttatcctgcatccgggaagaatggagta-gcagacaactgaataaggaataaagaggagctatattaagtgttagaacagctcagacgagacccatagtgggtaactcctttctgtaggtcatcctgtcaggtgttcagctctc-acagaaaaggaagccctggagagggctgctcctctctgcagctggtagtccccagacatctctgcaggtctctgaagcacttagcagagacggtagttcctatctgcagctggccctc-cattgtctccagctatcagcagagagggtagctcctctctgcagctagtcttccctcctctgtcttctgccatgctctggctgaatcctgggcttttatggacatcagagggaaggaagtgtgtgcccattgatccatgggcagccatgggtgggcccaggaaaaagcaccatgaatttcccctccagtctgcagggctggcagcctagcctgaaggtgaggcttcactggggacccacccccttccacccaggaacctgtctgcctccgaggtccattcataccacccaggctgctagcatcaaggggcacctgcaggccagtgcccaggcaccctcagaccccctcaacttcccctcccacactcctgttcctcagtgcccaaaatccagaggtgattgaggtaccaggaggctggcatgt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3738078 767 - 13033340 ----t-------ttttttaagactcagggtctcagtctgtcacccacgctggagtacagAATTGCTGGACAATtgttacggaatttttgggatgtcaattttctggctggaaacct-atgtggcaggtggagcctttgcctgagctcttatcctgcatctgggaagaatggagtaggcagacaagtgaataaggaataaagaggagctatattaaatgttagaacagctcagacgagacacacagtcggtaactcctttctgtaggtcatcctgtcaggtgttcagctctt-gcggaaaaggtagccctggagagggttgctcctctctgcagctggtagtccccagacatctctgcaggtctctgaagcacttggcagagagggtagt------------------------------------------------------tcctctctgcagctagtcttccctcctctgtcttctgccatgctctggctgaatcctgggcttttatggacattggaggggaggaagtgtgtgcccactgatccatgggcagccacgggtgggcccagggaaaagcaccatgaatttctcctccagtctgcaggactggcagcctcacctgaaggtgaggcttcactggggaactgcccccttccgcccaggagcctgtctgcctcccagatccatccataccacccaggctgctggcatcaaggggcacctgcaggccagtgcgcaggcaccctcagaccccctcagcttcccctcccacacttctgctcctcagtgcccaaaatccagaggtggttgaggtaccaggaggctggcatgt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5229834 822 + 11604778 ----tat-----ttttttaagagtcaaggtctcagtctgtcacccatgctggagtacagAATTGCTGGGCAATtgttacggaatctttgggatgtcaactttctggctggaaacct-atgtggcaggtggagcctttgcctaagctcttatcctgcatccaggaagaatggagtaggcagacaagtgaataaggaataaagaggagctgtattaagtgttagaacagctcagacgagacccatagtgggtagctcctttctgtaggtcatcctgtcaggtgttcagctctc-gcagaaaaggaagccccggagagggttgctcctctccgcagctggtagtccccagacatctctgcaggtctctgaagcacttagcagagagggtagtttctctctgcagctggccctc-cattgtctccagctatcagcagagaggatagatcctctctgcagctagtcttccctcttctgtcttctgccatgcttcggctgaatcctgggcttttatggacaccagaggggaggaagtgtgtgcccactgatccatgggcagacatgggtgggcccagaaaaaagcaccatgaatttcccctccagtccgcaggactgggagcctagcctgaaggtgaggcttcactggggacccacccccttccacccaggagcctgtctgcctcccaggtccatccataccacccagactgctggcatcaaggggcacctgcaggccagtgcccaggtaccctcagatcccctcagcttcccctcccacactcctgcccctcagtgcccaaaatccagaggtggttgacataccaggaggctggcttgt i aotNan1.NW_018501505v1 C 0 C 0 e otoGar3.GL873530 135683 0 + 36342412 C e canFam3.chr30 13421319 0 + 40214260 C e dasNov3.JH579377 1810422 0 - 2868945 C a score=1662.000000 s hg38.chrUn_KI270749v1 21455 6 + 158759 cagcag s panTro5.chr1 101803880 6 - 228573443 cagcac i panTro5.chr1 C 0 C 0 s panPan2.chr15 44381021 6 + 99763055 catcac i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 12471 6 - 24701 cagcac i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67511543 6 - 121039945 catcac i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 24024019 3 + 171882078 CAG--- i macFas5.chr7 I 3 C 0 s cerAty1.NW_012000887v1 3256654 3 + 7633303 cag--- i cerAty1.NW_012000887v1 C 0 I 3 s chlSab2.chr26 21957853 3 - 58131712 cag--- i chlSab2.chr26 C 0 I 3 s manLeu1.NW_012108674v1 52729 3 + 2620224 cag--- i manLeu1.NW_012108674v1 C 0 I 3 s colAng1.NW_012121598v1 2232892 3 + 10629787 cag--- i colAng1.NW_012121598v1 C 0 I 3 s calJac3.chr10 24192782 6 + 132174527 cagtac i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10594702 6 - 21366645 cactac i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3738845 6 - 13033340 caatac i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5230656 6 + 11604778 cagtac i aotNan1.NW_018501505v1 C 0 C 0 e otoGar3.GL873530 135683 0 + 36342412 C e macNem1.NW_012010577v1 13268869 6 - 40200012 I e rheMac8.chr7 23420042 6 + 169600520 I e canFam3.chr30 13421319 0 + 40214260 C e dasNov3.JH579377 1810422 0 - 2868945 C a score=4069691.000000 s hg38.chrUn_KI270749v1 21461 710 + 158759 tgcttccaatttgtgcacacctggctgggcagtgacagcaccctgctgggtcccaaccccactctatgatcagagcacagagccaggaggtgggagagaccaggcagcaggaagaggtgcctccaagcctgcaaggggc-----aagggg----ggcgttcccaggctccccaagagtgcagggatgcctgagtctgcagcattggtttgggtggctgggtggtggg-ctggggtggggacagagtaggggagttggataaactcccgtctgctccatggagtgggaggtccaggtctacagctacagctgcagtttgggcagctgcagcagcacccagggagctcccattccaactcggaa-gggcagggctcccacttgtcctcatcctgccaaatccagggagcatacaaccccggccacacctctcccctgcagctggcatgatggcagcagccactGCCATcacaatcacagcctattgtagcctcaaactcctgggcccaagtgatctttttacctcagtctccccaatggctggggccacag------------gcatgt-gccataatgcccatctaa--ttgttttttta-tttttgtagagaaggtggtctggctatattgcccaggttaatctctaattcctggatttaagcagtcttcctgcctcatcctcct-acatggctgggattacaggcaagagcgactgtgcccagcTCCTGATAAATCC s panTro5.chr1 101803886 709 - 228573443 tgcttcaaatgtttgcacacctggctgggctctgatagcaccctgctgggtcccaactccactctgagatcagagcactgagccaggaggtgggagagaccagggagcaggaggaggtgcctccaagcctgcaaggggc-----aaaggg----ggcacacccagcctccccaagagtgcagggatgcctgagtctgcagcattggtttgggtggctgggtagtggg-ctggggtggggacatagtaggggagttggatgaactcctgtctgctccatggagtggaaggtgcaggtctacagctacagctgcagtttgggcagctgcagccgcacccagggagctcccattccaa---ggaaggggcagggctcccacttgtccccatcctgccaactctagggagtatacaaccctggccacacctctgccctgcctttggcatgatggcagcagccgctGCCATcacaatcatagcttattgtagcctcaaactcctgggcccaagtgatctttttacctcagtctccccagtagccggggccacag------------gcatgt-gccacaatgcccatctat--ttttttttttattttttgtagaggtggtggtctggccatattgcccaggttaatctctaattcctggacttaagcagtcttcctgcctcatcctcct-acatggctgggattacaggcatgagcgactgtacccATCTCCTGATAAATCC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44381027 715 + 99763055 tggtcccaatgtgtgcacacctggctggagtgtgacagcaccctgctgggtcccaaccccactctgagatcagagcacagagccaggagctgggagagaccaggcagcaggaggaggcacctccaagcctgcaaggggc-----aagagggggtggcgttcccagcctccccaagagtgcagggatgcctgagtctgcagcattggtttgggtggctgggtggtggg-ctggggcaggggcagtgtaggggagttggataaactccggtctgctccatggagtgggaggtccaggtctacagctacagctgcagtttgggcagctgcagcagtacccagggagctcccattccaactcggaaggggcagggctcccacttgtccccatcctgccaactccagggagcatacaaccccggccacaactcccccctgcagctgacacgatggcagcagctgctGCCATcacaaccatagcttactgtagcctcaaattcctgagcccaagtgatctttttacctcagtctccccagtagctggggccacac------------gcatgt-gccacaatgcccatctaa--ttgttttttat-tttttgtagagagggtggtctggctatattgcccaggttcatctctaattcctggccttaagcaatcttcctgcttcatcctcct-aaatggctgggattacaagcatgagcgactgtgcccagcTCCTGATAAATCC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 12477 720 - 24701 tgcttccaatgtgtgcacacctggctgggcagtgacagcactctgctgggtcccaaccccatcctgagatcagagcacagagccaggaggtgggagagaccaggcagcaggaggaggtgcctccaagcctgcaaggggc-----aagggt----ggcgttcccaggctccccaagagtgcagggatgcctgag-ctgcagcattggtttgggtggctgtgtggtggg-ctggggtggggacagagtaggggagttggataaactcctgtctgctccatggagtgggaggtccaggtctacagctacagctgcagtttgggcagctgcagcagcacccagggagctcccattccaactcggaa-gggcagggctcccacttgtccccatcctgccaaatccagggagcatacaatcccggccacacctctcccctgcagctggcatgatggcagcagccactGCCATcacaatcacagcctattgtagcctcaaactcctgggcccaagtgatctttttacctca-tctccccaatagctggggccacaggcatgtgccacagcatgt-gccacaatgcccatctaa--ttgttttttat-tttttgtagagaaggtggtctggctatattgcccaggttaatctctaattcctggacttaagcagtcttcctgcctcatcctcct-acatggctgggattacaggcatgagcgactgtgcccagcTCCTGATAAATCC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67511549 711 - 121039945 tggtcccaatgtatgcacacctggctggactgtgacagcaccctgctgggtctcaaccccactctgagatcagagcacagagccaggagctgggagagaccaggcagcaggaagaggcacctccaagcctgcaaggagc-----aagggg----ggcgttcccaggatccccaagagtgcagggatgcctgagtctgcagcattggtttgggtggctgggtggtggg-ctggggcaggggcagtgtaggggagttggataaac-cctgtctgctccatggagtgggaggtccaggtctacagctacagctgcagtttgggcagctgcagcagcacccagggagctcccattctaactcggaaggggcagagctcccacttgtccccgtcctgccaactccagggagcagacaaccccggccacacctcccctctgcagctggcatgatggcagcagccactGCCATcacaatcatagcttattgtagcctcaaactcctgggcccaagtgatctttttacctcagtctccccaatagctggggccacac------------acatgt-gccacaatgcccatctaa--ttgtttttttgttttttgtagagagggtggtctggctgtattgcccaggttcatctctaattcctggccttaagcaatcttcttgcctcatcctcct-aaatggctgggattacaggcatgagcgactgtgcccagcTCCTGATAAATCC i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 3256660 717 + 7633303 tgctcccaatgtgtgcacacctggctggactgtgacagtgccctgctggatcccaaccccactctgacatcagagcacagagccaggagctgggagaggccaggcagcaggaggaggcatctccaagcctgcaaggggctgggtgtgggg----ggagttcccagactccccaagagtgcaaggatgcctgagtctgcagcattggtttgggtggctgggtggtgga-ctggggcaggggcagagtaggagagttggataaattcctgtctgctccgtggagtgggaggcccaggtctgcagctacagctgcagtttgggcagctgcagcagcacccagtaagctcccgttccaactcagaaggggcagggctcccacttgtccccatccttccaactctagggagcatataaccccagccacacctccccgctgcagctggcatgatggcagcagccactGCCATcacaattatagctcattgtagcctcaaactcctggacctaagtaatctttttacctcagtctccccaatagctggggacacaa------------gcgtgt-gccacaatgcccatctaa--ttgtttttttattttttgtagagaatgtggtctggctatatttcccaggttcatctctaattcctgcccttaagcaatcttcctgcctcatcctcct-aagtggctgggattacaggcatgagcgactatgcccagcTCCTGGTAAATCC i cerAty1.NW_012000887v1 I 3 C 0 s chlSab2.chr26 21957859 716 - 58131712 tgctcccaatgtgtgcacacctggctgggctgtgacagtaccctgctggatcccaaccccactctgacatcagagcacagagccaggagctgggagaggccaggcagcaggaggaggcatctccaagcctgcaaggggctgg--gtgggg----gcggttcccagactccccaagagtgcaaggatgcctgagtctgcagcattggtttgggtggctgggtggtgga-ctggggcaggggcagagtaggagagttggataaattcctgtctgctctgtggagtgggaggcccaggtctacagctacagctgcagtttgggcagctgcagcagcacccagtaagctcccgttccaactcagaaggggcagggctcccacttgtccccatccttccaactctagggagcatataaccccggccacacctccccactgcagctggcatgatggcagtagccgctGCCATcacaattatagctcattgtagtctcaaactcctggacctaagtaat-tttttacctcagtctccccaatagctggggacacaa------------gcatgt-gccacaatgcccatctaatttttttttttttttttttgtagagaatgtggtctggctatatttcccaggttcatctctaattcctgcccttaagcaatcatcctgcctcatcctcct-aagtggctgggattacaggcatgagcgactatgcccagcTCCTGGTAAATCC i chlSab2.chr26 I 3 C 0 s manLeu1.NW_012108674v1 52735 717 + 2620224 tgctcccaatgtgtgcacacctggctgggctgtgacagtgccctgctggatcccaaccccactctgacatcagagcacagagccaggagctgggagaggccaggcagcaggaggaggcatctccaagcttgcaaggggctgggtgtgggg----ggggttcccagactccccaagagtgcaaggatgcctgagtctgcagcattggtttgggtggctgggtggtgga-ctggggcaggggcagagtaggagagttggataaattcctgtctgctccgtggagtgggaggcccaggtctacagctacagctgcagtttgggcagctgcagcagcacccagtaagctcccgttccaactcagaaggggcagggctcccacttgtccccatccttccaactctagggagcatataaccccagccacacctccccgctgcagctggcatgatggcagcagccactGCCATcacaattatagctcattgtagcctcaaactcctggacctaagtaatctttttacctcagtctccccaatagctggggacacaa------------gcgtgt-gccacaatgcccatctaa--ctgtttttttattttttgtagagaatgtggtctggctatatttcccaggttcatctctaattcctgcccttaagcaatcttcctgcctcatcctcct-aagtggctgggattacaggcatgagcgactatgcccagcTCCTGGTAAATCC i manLeu1.NW_012108674v1 I 3 C 0 s colAng1.NW_012121598v1 2232898 714 + 10629787 tgctcccaatgtgtgcacacctggctgggctgtgacagtgccctgctggatcccaaccgcactctgacatcagagcacagagccaggagctgggagaggccaggcagcaggaggaggcatctccaagcctgcaaggggctgg--gtgggg----g-ggttcccagactccccaagagttcaaggatgcctgagtctgcagcattggtttggggggctaggtggtgga-ctggggcaggggcagagtaggagagttggataaattcctgtgtgctccatggagtgggaggcccaggtctacagctacagctgcagtttgggcagctgcagcagcacccaggaagctcccattccaactcggaaggggcagggctcccacttgtccccgtccttccaactccagggagcatataaccccagccacacctcccggctgcagctggcatgatggcagcagccgctGCCATcacaatcgtagctcattgtagcctcaaactcctggacctaagtaatctttttacctcagtctccccaatagctggggacacaa------------gcatgt-gccacaatgcccatctaa--ttttttttttattttttgtagagaatgtagtctggctatatttcccaggttcatctctaattcctgcccttaagcaatcttcctgcctcatcctcct-aaatggctgggattacaggcatgggcgactatgcccagcTCCTGATAAATCC i colAng1.NW_012121598v1 I 3 C 0 s calJac3.chr10 24192788 697 + 132174527 tgttcctaatgtatgcacacctggctgggctgtgacagcacctggctgggcccaa--cccactctgagattagagaatagtgtcaggatctgggagagaccaggcagcaggagtagactcctctaagcctggaagcagc-----aagagg----ggccttcccaggccccccaagagtgcaagaatacctgagtctgaagccctggt------ggctgagtcggggg---aaggcaagggcagagttggggaggtggcttgactactgcctgctccatggagtgggagtcccaggtctgcaactatagctgcagtttgagcagctgcagcagcacccagggagctcccattataactcagaaggggcagggcttccacttgtccccgtcctgccaactccagggagtatacagccccatcttcacctccccgctgcagctggtgtgatgttagcagccgctGTCATCACA---ATAActcactgtggcctcaaactcctgggccaaagtgatc-ttttacctcagcctccccagtagctggggccataa------------gcatgtggccacaatgtccatctaa--ttgttt-tgtg--ttttgtagagatgggggtctagctatattgcccaggttgatctctaagatctggccttaagcaatcttcctgactctgccttctaaaatggctgggattacaggcatgagccgctgtgcccagcTCCTGATAAATCC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10594708 695 - 21366645 tgttcctaaagtatgcacacctgactgggctgtgacagcacctggctgggccccaatccctccctgagatcagagaatagtgccaggatctgggagaggccaggcagcaggagtaggcatctctgagcctgtaaggggc-----aagagg----ggccttcccaggccccccaagagtgcaagaatgcctgagtctgaagccctggt------ggctgagtcggggggctgaggcaagggcagagttggggaggtggcttgactcctgcctgctccatggagtgggagtctcgggtctacaactatagttgcagtttggacagctgcagcagcacccagggagttcccattacaactcggaaggggcagggcttccacttgtccccatcctgccaactccagggagtatacagccccagctgcacctccccgctgcagttggcatgatgttatcagccgctGTCATcacaaccatagctcactgtagcctcaaactcc----------tgatc-ttttacctcagcctccccaatagctggggccataa------------gcattcggccacaatgcccatctaa--ttgtttctatg--ttttgtagacatgggggtctagctatattgccttggttgatctctaagatctggccttaagcaatcttctgacctctgccttct-aaatggctgggattacaggcatgagccactgtgcccagcTCCTGATAAATCC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3738851 704 - 13033340 tgttcctaaagtatgcacacctggctgggctatgacagcacctggctgggctccaaacctgctctgagatcagagaatagtgtcaggatctgggagaggccaggcagcaggagtaggcctctctgagcctggaaggggc-----aagagg----ggccttcccaggccccccaagagtgcaagaatgcctgagtctgaagctctggt------ggctgagtcatgtggctgaggcaagggcagagttggggaggtggcttgactcctacctgctccacggagtgggagtcccaggtctacaactatagctgcagtttcggcagctgcagcagcacccagggagctcccattacaactcggaagggccaggacttccacttgtccccgtcctgccaactccagggagtatatagccccagctgcacctccccgctgcagctggcatgatgttatcagccactGTCATcacaatcatagttcactgtagcctcaaactcctggcccaag-tgatc-ttttacctcagcctccccaatagctggggtcataa------------gcatgtggccacaatgcccatctaa--ttgtttttatg--ttttgtagagatgggggtctagctatattgcccaggttgatctctaagatctggccttaagcaatcttccagcctttgccttct-aaatggctgggattacaggcatgagccactgtgcccagcTCCTGATAAATCC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5230662 705 + 11604778 tgttcccaatgtatgcacacctggctgggctgtgacagcacctggctgggccccaaccccactctgaaatcagagaatagtcccaggatctgggagaggccaggcagcaggagtaggcacctctgagcctggaaggggc-----aagagg----ggccttcccaggccctccaagagtgcaagaatgcctatgtctgaagccctggt------ggctgagtcggggggctgaggcaagggcagagttggggaggtggcttgactcctgcctgctccatggagtgggatttccaggtctacaactatagctgcagtttgggcagctgcagcagcacccagggagctcccattacaacttggaaggggcagggcttccacttgtccccgtcttgccaactccagggagtatacagccccagctgcacctccccactacagctggcatgatgttagcagccgctGTTATcacaatcatagctcactatagcctcaaactcctgggcccaagtgatc-ttttacctcagcctccccaatagctggggccataa------------gcatgtggccacaatgcccatctaa--ttggttttatg--ttttgtagagatgggggtctagctatattgcccaggttgatctctaagtcctggccttaagcaatcttcctgcctctgccttct-aaatggctgggattacaggcatgagccactgtgcccagcTAATGATAAATCC i aotNan1.NW_018501505v1 C 0 C 0 e otoGar3.GL873530 135683 0 + 36342412 C e macNem1.NW_012010577v1 13268869 6 - 40200012 I e rheMac8.chr7 23420042 6 + 169600520 I e canFam3.chr30 13421319 0 + 40214260 C e dasNov3.JH579377 1810422 0 - 2868945 C e macFas5.chr7 24024022 0 + 171882078 C a score=41316.000000 s hg38.chrUn_KI270749v1 22171 6 + 158759 TTTCTT s panTro5.chr1 101804595 6 - 228573443 TTTCTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44381742 6 + 99763055 TTTCTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 13197 6 - 24701 TTTCTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67512260 6 - 121039945 TTTCTT i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 3257377 6 + 7633303 TTCCTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21958575 6 - 58131712 TTCCTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 53452 6 + 2620224 TTCCTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2233612 6 + 10629787 TTCCTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24193485 6 + 132174527 TTTCTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10595403 6 - 21366645 tttatt i saiBol1.JH378136 C 0 I 1961 s cebCap1.NW_016107324v1 3739555 6 - 13033340 TTTCTT i cebCap1.NW_016107324v1 C 0 I 1984 s aotNan1.NW_018501505v1 5231367 6 + 11604778 tttctt i aotNan1.NW_018501505v1 C 0 I 1994 s dasNov3.JH579377 1810422 6 - 2868945 TTTTTT i dasNov3.JH579377 C 0 C 0 e otoGar3.GL873530 135683 0 + 36342412 C e macNem1.NW_012010577v1 13268869 6 - 40200012 I e rheMac8.chr7 23420042 6 + 169600520 I e canFam3.chr30 13421319 0 + 40214260 C e macFas5.chr7 24024022 0 + 171882078 C a score=7304.000000 s hg38.chrUn_KI270749v1 22177 2 + 158759 AA s panTro5.chr1 101804601 2 - 228573443 AA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44381748 2 + 99763055 AA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 13203 2 - 24701 AA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67512266 2 - 121039945 AA i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 3257383 2 + 7633303 AA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21958581 2 - 58131712 AA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 53458 2 + 2620224 AA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2233618 2 + 10629787 AA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24193491 2 + 132174527 TT i calJac3.chr10 C 0 C 0 s canFam3.chr30 13421319 2 + 40214260 AA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1810428 2 - 2868945 AA i dasNov3.JH579377 C 0 C 0 e otoGar3.GL873530 135683 0 + 36342412 C e macNem1.NW_012010577v1 13268869 6 - 40200012 I e rheMac8.chr7 23420042 6 + 169600520 I e aotNan1.NW_018501505v1 5231373 1994 + 11604778 I e cebCap1.NW_016107324v1 3739561 1984 - 13033340 I e saiBol1.JH378136 10595409 1961 - 21366645 I e macFas5.chr7 24024022 0 + 171882078 C a score=24107.000000 s hg38.chrUn_KI270749v1 22179 5 + 158759 -TCAAA s panTro5.chr1 101804603 5 - 228573443 -TCAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44381750 5 + 99763055 -TCAAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 13205 5 - 24701 -TCAAA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67512268 5 - 121039945 -TCAAA i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 3257385 5 + 7633303 -TCAAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21958583 5 - 58131712 -TCAAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 53460 5 + 2620224 -TCAAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2233620 5 + 10629787 -TCAAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24193493 5 + 132174527 -TTAAA i calJac3.chr10 C 0 I 1958 s otoGar3.GL873530 135683 5 + 36342412 -TCAAA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13421321 5 + 40214260 -CCAAA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1810430 5 - 2868945 AACAA- i dasNov3.JH579377 C 0 C 0 e macNem1.NW_012010577v1 13268869 6 - 40200012 I e rheMac8.chr7 23420042 6 + 169600520 I e aotNan1.NW_018501505v1 5231373 1994 + 11604778 I e cebCap1.NW_016107324v1 3739561 1984 - 13033340 I e saiBol1.JH378136 10595409 1961 - 21366645 I e macFas5.chr7 24024022 0 + 171882078 C a score=21333.000000 s hg38.chrUn_KI270749v1 22184 4 + 158759 GTCT s panTro5.chr1 101804608 4 - 228573443 GTCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44381755 4 + 99763055 GTCT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 13210 4 - 24701 GTCT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67512273 4 - 121039945 GTCT i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 3257390 3 + 7633303 -TCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21958588 4 - 58131712 GTCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 53465 3 + 2620224 -TCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2233625 4 + 10629787 GTCT i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 135688 4 + 36342412 GTCT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13421326 4 + 40214260 GTCT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1810435 4 - 2868945 ATCT i dasNov3.JH579377 C 0 C 0 e macNem1.NW_012010577v1 13268869 6 - 40200012 I e rheMac8.chr7 23420042 6 + 169600520 I e aotNan1.NW_018501505v1 5231373 1994 + 11604778 I e cebCap1.NW_016107324v1 3739561 1984 - 13033340 I e saiBol1.JH378136 10595409 1961 - 21366645 I e calJac3.chr10 24193498 1958 + 132174527 I e macFas5.chr7 24024022 0 + 171882078 C a score=1787359.000000 s hg38.chrUn_KI270749v1 22188 236 + 158759 TCATCAGCAGCCTTACTTACCACAAT------CTTCCCAGATGATCTCAAG-TATCCAAGGAAACTAAAAGTAGCTACTGCTGACAAAACTGTTGGGTTCCCTGATACTGTGCAAGAATAAAATGATGCTAGGTCTTCTGTTAGCTAGCTCTTC-TTCT-GTAACA----G-----TCTCTTTCT----ATGTATTAATCAAAACTGATGCAACTTTTTAAAGAACTATTCCTAGAAACTTTCTCCCTTCCCAGTCAC s panTro5.chr1 101804612 236 - 228573443 TCATCAGCAGCCTTACTTACTACATT------CTTCCCAGATGATCTCAAGTTATCCAAGGAAATTAAAAGTAGCTACTGCTGACAAAACTGTTGGGTTCCCTGATATTATGCAAGAATAAAATTATGCTAGGTCTCCCATTAGCTAGCTCTTC-TTCT-GTGACA----G-----TCTCTTTCT----ATGTATTAATCAAAACTGATGCAACTTTTTTAAGAACTATTCCCAGAAACTTT-TCCCTTCCCAGTCAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44381759 233 + 99763055 TCATCAGCAGCCTTACTGACCACAAT------CTTCCCAGATGATCTCAAG-TATCCAAAGAAGTTAAAAGTAGCTTCTGCTGACAAAACTGTTGGGTTCCCTGATATTGTGCAAGAATAAAATTATGCTAGGTCTTCCGTTAGCTAGC---TC-TTCT-GTAACA----G-----TTTCTTTCT----ATGTATGAATCAAAACTGATGCAACTTTTTAAAGAACTATTCCTAAAAACTTTCTCCCTTCCCAGTCAG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 13214 235 - 24701 TCATCAGCAGCCTTACTTACCACAGT------CTTTCCAGATGATCTCAAG-TATCCAAGGAAACTAAAAGTAGCTACTGCTGACAAAACTGTTGGGTTCCCTGATATTGTGCAAGAATAAAATGATGCTAGGTCTTCCGTTAGCTAGCTCTTC-TTCT-GTAACA----G-----TCTCTTTCT----ATGTATTAATC-AAATTGATGCAACTTTTTAAAGAACTATTCCTAGAAACTTTCTCCCTTCCCAGTCAG i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67512277 233 - 121039945 TCATCAGCAGCCTTACTTACCACAAT------CTTCCCAGATGATCTCAAG-TATCCAAAGAAGTTAAAAGTAGCTTCTGCTGACAAAACTGTTGGGTTCCCTGATATTGTGCAAGAATAAAATTATGTGAGGTCTTCCTTTAGCTAGC---TC-TTCT-GTAGCA----G-----TCTCTTTCT----ATGTATGAATCAAAACTGATGCAACTTTTTAAAGAACTATTCCTAGAAACTTTCTCCCTTCCCAGTCAG i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 3257393 234 + 7633303 TCACCAGCAGCCTTACTTACCACCAT------CTTCCCAGATGATCTCAAG-TATCCAAAGAAATTAAAAGTAGCTTCTGCTGACAAAGCTGTTGGGTTCCCTGATATTGTTCAAGAATAAAATTATGCTAGGTCTTC-ATTAGCTAGCTCTTC-TTCT-GTAACA----G-----TCTCTTTCT----ATGTATGAATCAAAACTCATGCAACTTTTTAAAG-ACTATTCCTAGAAACTTTCTCCCTTCCCAGTCAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21958592 232 - 58131712 TCACCAGCAGCCTTACTTACCACCAT------CTTCCCAGATGATCTCAAG-TATCCAAAGAAATTAAAAGTAACTTCTGCTGACAAAGCTGTTGGGTTCCCTAATATTGTTCAAGAATAAAATTATGCTGCGTCTTC-ATTAGCTAG---TTC-TTCT-GTAACA----G-----TCTCTTTCT----ATGTATGAATCAAAACTCATGCAACTTTTTAAAGAACTATTCCTAGAAACTTTCTCCCTTCCCAGTCAG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 53468 235 + 2620224 TCACCAGCAGCCTTACTTACCACCAT------CTTCCCAGATGATCTCAAG-TATCCAAAGAAATTAAAAGTAGCTTCTGCTGACAAAGCTGTTGGGTTCCCTGATATTGTTCAAGAATAAAATTATGCTAGGTCTTC-ATTAGCTAGCTCTTC-TTCT-GTAACA----G-----TCTCTTTCT----ATGTATGAATTAAAACTCATGCAACTTTTTAAAGAACTATTCCTAGAAACTTTCTCCCTTCCCAGTCAG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2233629 233 + 10629787 TCATCAGCAGCCTTACTTACCACCAT------CTTCCCAGATGATCTCAAG-TATCCAAAGAAATTAAAAGTAGCTTCTGCTGACAAAGCTGTTGGGTTCCGTGATATTGTTCAAGAATAAAATTATGCTAGGTCTTC-ATTAGCTAGCTCTTC-TTCT-GTAGCA----G-------TCTTTCT----ATGTATGAATCAAAACTCATGTAACTTTTTAAAGAACTATTCCTAGAAACTTTCTCCCTTCCCAGTCAG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24195456 231 + 132174527 ttatCAGCTGCCTTACCTACTACCAT------CTTCCCAGAGGATCTCAAG-TATCCAAAGAAATTAAAAGTAGC-TCTGCTGACACAACAGTTGGGTTCCCTGATATAGTGCAAGAAGAAAATTATGCTAGGTCCTTCTTTAGCTAGTTCTTT-TTCT-GGAACA----A-----TCTC----T----GTGTATGAATCAAAACTGATGCAACTTTTTTGAGAACTATTCCTAGAAACATTCTCCCTTCTCAGTCAG i calJac3.chr10 I 1958 C 0 s saiBol1.JH378136 10597370 232 - 21366645 tcatCAGCTGCCTTACTTACCACCAT------CTTCCCAGATGATCTCAAG-TATTCAAAGAAATTAAAAGTAGCTTCTGCTGACAAAACTGTTGGGTTCCCTGATATTGTGCAAGAAAAAAATTATGCTAGGTCTTTCTTTAGCTAGTTCTTT-TTCT-AGAACA----A-----TCTC----T----GTGTATGAATCAAAACTGATGCAACTTTTTCGAGAACTATTCCTAGAAACATTCTCCCTTCTTAGTCAG i saiBol1.JH378136 I 1961 C 0 s cebCap1.NW_016107324v1 3741545 230 - 13033340 tcatCAGCTGCCTTACTTACCACCAT------CCTCCCAGATGATCTCAAG-TATCCAAAGAAATTAAAAGTAGCTTCTGCTGACAAAACTGTTGGGTTCCCTGATATTGTGCAAGAAGAAAATTATGCTAGGTCTTCCTTTAGCTAGTTCTTT-TTCT-GGAACA----A-----TCTC----------TGTATGAATCAAAACTGATGCTACTTTTTCGAGAACTATTCCTAGAAACATTCTCCCTTCTTAGTCAG i cebCap1.NW_016107324v1 I 1984 C 0 s aotNan1.NW_018501505v1 5233367 232 + 11604778 tcatCAGCTGCCTCACTTACCACCAT------CTTCCCAGATGATCTCAAG-TATCCAAATAAATTAAAAGTAGCTTCTGCTGACAAAACTGTTGGGTTCCCTGACATTGTGCAAGAAGAAAATTATGCTAGGTCTTCCTTTAGCTAGTTCTTT-TTCT-GGAACA----A-----TCTC----T----GTGTATGAATCAAAACTGATGCAACTTTATCGAGAACTATTCCTAGAAACATTCTCCCTTCTCAGTCAG i aotNan1.NW_018501505v1 I 1994 C 0 s otoGar3.GL873530 135692 241 + 36342412 TCATCATTAGTCTGCCTTACCACAAC---CAACTTCCTAGATGAGCTCAAG-GATCCAAAGAAATAACAAGTAGCTT---CTGACAAAAATGTTGGCTTCCCTGATATTGTGCAAGATGAAACTTATTCTATGCCTTGCTTTAACTATCTTTTCTTTCT-GGAATAACCTG-----TTTCTTTCT----ACATACACATCAAAATTGAGGCAACTTTTCAAAAAAATCTTCTTAAATGGTTTCTTCCATCTCAGACCA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13421330 246 + 40214260 TCATTAGCAGCCTTACTTACCACCACCGCCACCCTCCCAGATGACCTCAAA-GATCCAAGGAAATAAAAAGTAGCTTCTGCTACTAAAACTATTGGATTCTCTGAGATTGTGTAAGAAGAAAATTACTCTATGCCTTGCTTCAGCTATCTCATC-TTTTCAGAATA----A-----CCTTTGTCTCCCGAAGTAGCAATCAAAATTAATACAATTTTCT-GAGAAAGCTTCCTAGATGATTTTTCCCATCTCAACCAG i canFam3.chr30 C 0 I 5 s dasNov3.JH579377 1810439 242 - 2868945 TCATTAGAAGCTGTACTTACCATCAG---CACCTTCCCAGATGATATCAAG-GATT-AAGGGAATTAAAAATTACTTCTGATGGTAAAATGGATGTGTTCCCTGACATTGTGCAAGCAGAAAATTCATTTACATTTTGTTTTAGCTCGCTCTTC-TTCC-TGGAAA----GACCTATCTCTTCCT----ATATATAATTC-AAATTGATTCAACTTTTCCAAGAAATCTTTCTGGAAGTCTTCTCCCATGGCAGTCAG i dasNov3.JH579377 C 0 C 0 e macNem1.NW_012010577v1 13268869 6 - 40200012 I e rheMac8.chr7 23420042 6 + 169600520 I e macFas5.chr7 24024022 0 + 171882078 C a score=1826593.000000 s hg38.chrUn_KI270749v1 22424 162 + 158759 AATTAAT---GTATT-------ATTTA----TACATTTAAAGG----ACTATATAAGTAGGACATGCTTTGGGTATATAACAGCACTTACGGCCATTTACTTTGTGGTTCAGTGATTTCTGTGTGCTTCTGACTTGTATATACTTTCAGCCCTTGTAGATGTAGTGGTGGTAGTTTTCCC s panTro5.chr1 101804848 130 - 228573443 AATTAAT---GTATT-------ATTTA----TCCATTTAAAGG----ACTATATAAGTAGGACATGGT--------------------------------TTTGTGGTTCAGTGATCTCTGTGTGCTTCTGACTTGTATATACTTTCAGCTCTTGTAGATGTAGTGGTGGTAGTTTTGCC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44381992 162 + 99763055 AATTAAT---GTACT-------ATTTA----TCCGTTTAAAGG----ACTATATAAGTAGGACACGGTTTGCGTATATCACAGCACTTATGGCCATTTACTTTGTGGTTCAGTGATTTCTGTGTGCTTCTGACTTGTATATACTTTCAGCCCTTGTAGATGTAGTGGTTGTAGTTTTCCC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 13449 162 - 24701 AATTAAT---GTATT-------ATTTA----TCCATTTAAAGG----ACTATATAAGTAGGACATGGTTTGGGTATATAACCGCACTTACGGCCATTTACTTTGTGGTTCAGTGATTTCTGTGTGCTTCTGACTTGTATATACTTTCAGCCCTTGTAGATGTAGTGGTGGTAGTTTTCCC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67512510 162 - 121039945 AATTAAT---GTATT-------ATTTA----TCCATTTAAAGG----ACTATGTAAGTAGGACATGGTTTGGGTATATCACAGCACTTATGGCCATTTACTTTGTGGTTCAGTGATTTCTGTGTGCTTCTGACTCGTATATACTTTCAGCCCTTGTAGATATAGTGGTTGTAGTTTTCCC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23420048 162 + 169600520 AATTAAT---GTATT-------ATTTA----TGCATTTAAAGG----ACTATATAAGTAGGACATGGTTTGGGTATATCACAGCACTTATGGCCATTTACTTCATGGTTCAGTGATTTCTGTGCGCTTCTGACTTGTATATACTTTCAGCCCTTGTCAATGTAGTGGTTGTAGCTTTCCC i rheMac8.chr7 I 6 C 0 s macFas5.chr7 24024022 162 + 171882078 AATTAAT---GTATT-------ATTTA----TGCATTTAAAGG----ACTATATAAGTAGGACATGGTTTGGGTATATCACAGCACTTATGGCCATTTACTTCGTGGTTCAGTGATTTCTGTGCGCTTCTGACTTGTATATACTTTCAGCCCTTGTCAATGTAGTGGTTGTAGCTTTCCC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13268875 162 - 40200012 AATTAAT---GTATT-------ATTTA----TGCATTTAAAGG----ACTATATAAGTAGGACATGGTTTGGGTATATCACAGCACTTATGGCCATTTACTTCGTGGTTCAGTGATTTCTGTGCGCTTCTGACTTGTATATACTTTCAGCCCTTGTCAATGTAGTGGTTGTAGCTTTCCC i macNem1.NW_012010577v1 I 6 M 375 s cerAty1.NW_012000887v1 3257627 162 + 7633303 AATTAAT---GTATT-------ATTTA----TGCATTTAAAGG----ACTATATAAGTAGGACATGGTTTGGGTATATCACAGCACTTATGGCCATTTACTTCGTGGTTCAGTGATTTCTGTGCGCTTCTGACTTGTATATACTTTCAGCCCTTGTCAATGTAGTGGTTGTAGCTTTCCC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21958824 162 - 58131712 AATTAAT---GGATT-------ATTTA----TGCATTTAAAGG----ACTATATAAGTAGGACATGGTTTGGGTATATCACAGCACTTATGGCCATTGACTTCGTGGTTCAGTGATTTCTGTGCACTTCTGACTTGTATATACTTTCAGCCCTTGTCAATGTAGTGGTTGTAGCTTTCCC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 53703 162 + 2620224 AATTAAT---GTATT-------ATTTA----TGCATTTAAAGG----ACTATATATGTAGGACATGGTTTGCGTATATCACAGCACTTATGGCCATTTACTTCGTGGTTCAGTGATTTCTGTGCGCTTCTGACTTGTATATACTTTCAGCCCTTGTCAATGTAGTGGTTGTAGCTTTCCC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2233862 162 + 10629787 AATTAAT---GTATT-------ATTTA----TGCATTTAAAGG----ACTATATAAGTAGGACATGGTTTGGGTATATCACAGCACTTATGGCCATTTACTTTGTGGTTCAGTGATTTCTGTGTGCTACTGACTTGTATATACTTTCAGCCCTTGTCAATGTAGTGGTTGTAGCTTTCCC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24195687 145 + 132174527 AATTAAG---GTATT-------ATTTA----TCCATTTAAAGG----ACTATTTAAGTAGGACATGGTTTGGGTATGTCATAGCACTCATGGCCATTTAATTAATGGTTCAGTGATTTCTGTATGCTTCTGA-----------------CCCTTGTAGATTTAGTGGTTGTAGTTTTCCC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10597602 161 - 21366645 AATTAAG---GTATT-------ATTTA----TCCATTTAAAGG----ACTACTTAAGTAGGACATGGTTTGGGTATGTCATAGCACTTATGGCCATTTAATTTGTGGTTCAGTGATTTCTGTGTGCTTCTGACTC-TATATATTTTCAGCCCTTGTAGATTTAGTGGTTGTAGTTTTCCC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3741775 162 - 13033340 AATTAAG---GTATT-------ATTTA----TCCATTTAAAGG----ACTATTTAAGTAGGACATGATTTGGGTATGTCATAGCACTTATGGCCATTTAATTTGTAGTTCAGTGATTTCTGTGTGCTTCTGACTCGTATATATTTTCAGCCCTTGTAGATTTAGTGGTTGTAGTTTTCCC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5233599 162 + 11604778 AATTAAG---GTATT-------ATTTA----TCCATTTAAAGG----GCTATTTAAGTGGAATATGGTTTGGGTATGTCATAGCACTTATGACCATTTAATTTGTGGTTCAGTGATTTCTGTGTGCTTCTGACTCATATATACTTTCAGCCCTTGTAGATTTAGTGGTTGTAGTTTTCCC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 135933 165 + 36342412 AATTAATCTCTTTTT-------ATTTA----TCCATTTTAAAT----ACTAGGAAAATAAGACTTGGTTTGACTATATCACAGCACTTGTGGCCTCTTACCTAACATTTCAGTGATTTCTGTGTGCTTCTGACTTGTGTATATTGTCAGCCCCTGGTGAGTTAGCAATTATAGTTTTCCA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13421581 171 + 40214260 AACTACC---TTTTTAAAAAAAATTCA----TCCATTCAAAGGACTAACTATATAAATAGGAATTGATTTGGGTATACTGTAACACCTATAGCTATCTTCCCTGCATTTCAGTGATTTTTATGTGTTCCTGACTTGTATGTATTGTCAGCCCTTATAGAATTAGCACTTG--GCCGTCCA i canFam3.chr30 I 5 C 0 s dasNov3.JH579377 1810681 159 - 2868945 AATTAAT---CTCTT-------TTTTATGTGTGCATTCTAAAG----ATCAGGTAAGTAGGACTTAATTTAGATATATTTCAGCTCGTACACTCACCCAACTTGCATTTCAGTGGTTTCTCTGTGTTTCTGGCTTCTGC------TCAGCCCTTGTGGAGTTAGTA-CTATGACTTTCCA i dasNov3.JH579377 C 0 C 0 a score=103054.000000 s hg38.chrUn_KI270749v1 22586 8 + 158759 AACTTAAA s panTro5.chr1 101804978 8 - 228573443 AACTTAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44382154 8 + 99763055 AACTTAAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 13611 8 - 24701 AACTTAAA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67512672 8 - 121039945 AACTTAAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23420210 8 + 169600520 AACTTAAA i rheMac8.chr7 C 0 I 379 s macFas5.chr7 24024184 8 + 171882078 AACtgaaa i macFas5.chr7 C 0 C 0 s cerAty1.NW_012000887v1 3257789 8 + 7633303 AACTTAAA i cerAty1.NW_012000887v1 C 0 I 326 s chlSab2.chr26 21958986 8 - 58131712 AACTTAAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 53865 8 + 2620224 AACTTaaa i manLeu1.NW_012108674v1 C 0 I 360 s colAng1.NW_012121598v1 2234024 8 + 10629787 AGCTTAAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24195832 8 + 132174527 AACTTAAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10597763 8 - 21366645 AACTTAAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3741937 8 - 13033340 AACTTAAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5233761 8 + 11604778 AACTTAAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 136098 8 + 36342412 AACTTAAA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13421752 8 + 40214260 AACTTAAA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1810840 8 - 2868945 GACTTGAA i dasNov3.JH579377 C 0 C 0 e macNem1.NW_012010577v1 13269037 375 - 40200012 M a score=79212.000000 s hg38.chrUn_KI270749v1 22594 13 + 158759 TTTGTCTTTATCA s panTro5.chr1 101804986 13 - 228573443 TTTATCTTTATCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44382162 13 + 99763055 TCTATCTTTATCA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 13619 13 - 24701 TTTATCTTTATCG i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67512680 13 - 121039945 TCTATCTTTATCA i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 24024192 13 + 171882078 cctatctgtacta i macFas5.chr7 C 0 I 361 s chlSab2.chr26 21958994 13 - 58131712 TCTATCTTTATCA i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 2234032 13 + 10629787 TCTATCTTTATCA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24195840 13 + 132174527 TCTATCTTTATCA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10597771 12 - 21366645 TCTATC-TTATCA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3741945 13 - 13033340 TCTATCTTTATCA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5233769 13 + 11604778 TCTATCTTTATTA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 136106 13 + 36342412 TCTATCTCTGTTA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13421760 11 + 40214260 --TCTCTCTCTCG i canFam3.chr30 C 0 I 2 s dasNov3.JH579377 1810848 13 - 2868945 TCTATCTCAATCC i dasNov3.JH579377 C 0 C 0 e manLeu1.NW_012108674v1 53873 360 + 2620224 I e macNem1.NW_012010577v1 13269037 375 - 40200012 M e rheMac8.chr7 23420218 379 + 169600520 I e cerAty1.NW_012000887v1 3257797 326 + 7633303 I a score=382906.000000 s hg38.chrUn_KI270749v1 22607 63 + 158759 TCCACCTTTATCCACAGTCCTCCTCATGATTAGCACATTGTCAATAAATACTTACTAAGCTGA s panTro5.chr1 101804999 63 - 228573443 TCCACCTTTATCCATATTCCTCCCCATGATTAGCATATTGTCAATAAATATTTACTAAGCTGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44382175 63 + 99763055 TCCACCTTTATCCACAGTTCTCCTCATGATTAGCACATTGTCAATAAATATTTATTAAGCTGA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 13632 63 - 24701 TCCACCTTTATCCACAGTCCTCCTCATGATTAGCACATTGTCAATAAATATTTACTAAGCTGA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67512693 63 - 121039945 TCCACCTTTATCCACAGTTCTCCTCATGATTAGCACATTGTCAATAAATACTTATTAAGCTGA i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 21959007 63 - 58131712 TCCACCTTTATCCCCAGTCCTCCTCATGATTAGCACGTTGTCAATAAATACTTATTAAGCTGA i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 2234045 63 + 10629787 TTCACCTTTATCCACAGTCCTCCTCATGATTAGCACGTTGTCAATAAATACTTATTAAACTGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24195853 63 + 132174527 TCCACCTTTATCCACAGTCCTCCTTATGATTAGCACATTGTCAATAAATATTTATTAAGTGGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10597783 59 - 21366645 TCCACCTTTATCCACAGTCTTCCTTATGATTAGCACATTGTCAATAAA----TATTAAGTGGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3741958 63 - 13033340 TCCACCTTTATCCACAGTCCTCCTTATGATTAGCACATTGTCAATAAATATTTATTAAGTGGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5233782 63 + 11604778 TCCACCTTTATCCACAGGCCTCCTTATGATTAGCACATTGTCAATAAATGTTTATTAAGTGGA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 136119 63 + 36342412 TCCACTCTCATCCTCACTCCTCCCCATGATTATCATATTATCAATAAATATTTATTAAGCTGA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13421773 62 + 40214260 TCCAAACT-ATCTTCACTCCTGGCCAAGATTAGCACATTGTCAATAAGTGTTCACTAAACTAA i canFam3.chr30 I 2 I 11 s dasNov3.JH579377 1810861 57 - 2868945 TCCACACTTCCCCTTACTCCTCTCCTC------CACATTGTCAATAAATGTTCATTAAATTGA i dasNov3.JH579377 C 0 C 0 e manLeu1.NW_012108674v1 53873 360 + 2620224 I e macNem1.NW_012010577v1 13269037 375 - 40200012 M e rheMac8.chr7 23420218 379 + 169600520 I e cerAty1.NW_012000887v1 3257797 326 + 7633303 I e macFas5.chr7 24024205 361 + 171882078 I a score=2613409.000000 s hg38.chrUn_KI270749v1 22670 404 + 158759 ACTGAAAGT------------------TTTTATTACACATAAATACTAAGATGTCCATGTCCATGGTCATGCAGGACAGCAGAAGATAA-TTTTTTTTACCAGTGTATCTATTGCTAACAATTGCTTCAAGGTCAGGAGCCAACTCATGTATTAGACATGTAAATCTTGTGAAAATATTCATATTGGAAACAGCATGTAGCAAGTGCAAACAGAACTAAATAAAT------------------------------------CCTTTAATTTA----------TCACAGTCCC---------------------TTC-GAAGTATGAA------TTCTTCTTCTAGCATTACAT-C------------------------AAATTTGATAAAATCC-----------------AAAAATATTTTATCTCAAT----GTTTTAAAAG--------------TGTTGATGCTGTATACA-------------------------------------------------TTGAGTTATTGTACAATTGGATGGAACCCACATTCAAAGTTTTT-CTTCAATGTTAAAATTAAATGGTTCTCTCTGTGATTC s panTro5.chr1 101805062 405 - 228573443 ACTGAAAGT------------------TTTTATTATGCATAAATACTAAGATGTCCATGTCCATGGTCATGTAGGACAGCAGAAGATAATTTTTTTTTACCAGTGTATCTATTGCTAACGATTGCTTCAAGGTCAGGAGCCAACTCATGTATTAGACATGTAAATCTTGTGAAAATATTCATATTGGAAACAGCATGTAGCAAGTGCAAACAGAACTAAATAAAT------------------------------------CCTTTAATTTG----------TCACAGTCCC---------------------TTC-AAAGTATGAA------TTCTTCTTCTAGCATTACAT-C------------------------AAATTTGATAAAATCC-----------------AAAAATATTTTATCTCAAT----ATTTTAAAAG--------------TGTTGATGCTGCATTCA-------------------------------------------------TTTAGTTATTGTTCAATTGAATGGAACCCACATTCAAAGTTTTT-CCTCAATGTTAAAATTAAACGGTTCTCTCTGTGATTC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44382238 405 + 99763055 ACCGAAAGT------------------TTTCATTATGCATAGATACTAAGATGTCCATGTCCATGGTCATGCAGGACAGCAGAAGATAA-TTTTTTTTACCAGTGTATCTATTGCTAGCAATTGCTTCAAGGTCAGGAGCCAACTCATGTATTAGACATGTAAATCTTGTGAAAATATTCATACTGGAAACAGCATATAGCAAATGCAAACAGAAGGAAATAAAT------------------------------------CCTTTAATTTA----------TCACAGTCCC---------------------TTC-AAAGTATGAA------TTCTTCTTCTAGCATTACATCC------------------------AAATTTGATAAAATCC-----------------AAAAATATTTTATCTCAAT----GTTTTAAAAG--------------TGTTGATGCTGTATACA-------------------------------------------------TTGAGTTATTGTACAACTGAATGGAACCCACATTCAAAGTTTTT-CCTCAATGTTAAAATTAAATGGTTCTCTCTGTGATTC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 13695 403 - 24701 ACTGAAAGT------------------TTTTATTATGCATAAATACTAAGATGTCCATGTCCATGGTCATGCAGGACAGCAGAAGATAATTTTTTTTTACCAGTGTATCTATTGCTAACAATTGCTTCAAGGTCAGGAGCCAACTCATGTATTAGACATGTAAATCTTGTGAAAATATTCATATTGGAAACAGCATGTAGCAAGTGCAAACAGAACTAAATAAAT------------------------------------CCTTTAATTTA----------TCACAGT-CC---------------------TTC-AAAGTATGAA------TTCTTCTTCTAGCATTACAT-C------------------------AAATTTGATAAAATCC-----------------AAAAATATTTTATCTCAAT----GTTTTAAAAG--------------TGTTGATGCTGTATACA-------------------------------------------------TTGAGTT-TTGTACAATTGAATGGAACCCACATTCAAAGTTTTT-CCTCAATGTTAAAATTAAATGGTTCTCTCTGTGATTC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67512756 404 - 121039945 ACCGCAAGT------------------TTTTATTATGCATAAATACTAAGATGTCCATGTCCATGGTCTTGCAGGACAGCAGAAGATAA--TTTTTTTACCAGTGTATCTATTGCTAACAATTGCTTCAAGGTCAGGACCCAACTCATGTATTAGACATGTAAATCTTGTGAAAATATTCATACTGGAAACAGCATGTAGCAAGTGCAAACAGAACTAAATAAAT------------------------------------CCTTTAATTTA----------TCACAGTCCC---------------------TTC-AAAGTATGAA------TTCTTCTTCTAGCATTACATCC------------------------AAATTTGATAAAATCC-----------------AAAAATATTTTATCTCAAT----GTTTTAAAAG--------------TGTTGATGCTGTATACA-------------------------------------------------TTGAGTTATTGTACAATTGAATGGAACCCACATTCAAAGTTTTT-CCTCAATGTTAAAATTAAATGGTTCTCTCTGTGATTC i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 21959070 403 - 58131712 ACTGAAAGT------------------TTTTATTATGCATAAATACTAAGATGTCCATGTCCATGGTTATGCAGGACAGCAGAAGGTAA---TTTTTTACCATTGTATCTATTGCTAACAATTGCTTCAAGGTCAGGAGTAAGCTCATGTATTAGACAGGTAAATCTTGTGAAAATATTCACATTGGAAACAGCATATAGCAAGTGCAAACAGAACTAAATAAAT------------------------------------ACTTTAATTTA----------TGACAGTCCC---------------------TTC-AAAGTATGAA------TTCTTCTCCTAGCATTACATAC------------------------AAATTTGATAAAATCC-----------------AAAAATATTTTATCTCAAT----GTTTTAAAAG--------------TGTTGATGCTGTATACA-------------------------------------------------CTGAGTTATTGCACAACTGAATGGAACCCACATTCAAAGTTTTT-CCTCAATGTTAAAATTAAATGGTTGTCTCTGTGATTC i chlSab2.chr26 C 0 C 0 s nasLar1.chrUn_JMHX01226723v1 28 404 - 432 attGAAAGT------------------TTTTATTATGCATAAATACTATGATGTCCATGTCCATGGTCATGCAGGACAGCAGAAGGTAA--TTTTTTTACCAGTGTATGTATTGCTAACAATTGTTTCAAGGTCAGGAGCCAGCTCATGTATTAGACATGTAAATCTTGTGAAAATATTCACATTGGAAACAGCATATAGCAAGTGCAAACAGAACTAAATAAAT------------------------------------CCTTTAATTTA----------TCACAGTCCC---------------------TTC-AAAGTATGAA------TTCTTCTCCTAGCATTACATCC------------------------AAATTTGATAAAATCC-----------------AAAAATATTTTATCTCAGT----GTTTTAAAAG--------------TGTTGATGCTGTATACA-------------------------------------------------TTGAGTTATTGCACAACTGAATGGAACCCACATTCAAAGTTTTT-CCTCAATGTTAAAATTAAATGGTTGTCTCTGTGATTC i nasLar1.chrUn_JMHX01226723v1 N 0 N 0 s colAng1.NW_012121598v1 2234108 403 + 10629787 ACTGAAAGT------------------TTTTATTATGCATAAATACTATGATGTCCATGTCCATGGTCATGCAGGACAGCAGAAGGTAA---TTTTTTACCAGTGTATGTATTGCTAACAATTGTTTCAAGGTCAGGCGCCAGCTCATGTATTAGACATGTAAATCTTGTGAAAATATTCACATTGGAAACAGCATATAGCAAGTGCAAACAGAACTAAATAAAT------------------------------------CCTTTAATTTA----------TCACAGTCCC---------------------TTC-AAAGTATGAA------TTCTTCTCCTAGCATTACATCC------------------------AAATTTGATAAAATCC-----------------AAAAATATTTTATCTCAAT----GTTTTAAAAG--------------TGTTGATGCTGTATACA-------------------------------------------------TTGAGTTATTGCACAACTGAATGGAACCCACATTCAAAGTTTTT-CCTCAGTGTTAAAACTAAATGGTTGTCTCTGTGATTC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24195916 399 + 132174527 ACTGAAAGT------------------TTTTATTATGCATAAATACTAAGATGTTCATGTCCATGCTCATGCAGGACAGCAGAAGATAA--TTTTTTTACCAGTGTATCTATTGGTAACAATTGCTGCAAGGTTAAGAGCCAACTCATGTATTAAGCATGTAAATCTTGTGAAAATATTCATATTGAAAACAGCATGTAGCAAGTGCAAACAGGACCAAGTAAAT------------------------------------CATTTA---------------TGACAGTCTC---------------------TTC-AAAGTATGAA------TTCTTCTCCTAGCATTACATCC------------------------TAATTTGATAATATTC-----------------AAAAATATTTTATCTCAAT----ATTTTAAAAG--------------TGTTGATGCTATATACA-------------------------------------------------TCGAGCTATTGTACAATTGAATGGAACCCACATTCAAAGATTTT-CCTCAATGTTAAAATTAAGTGTTTCTCTCTGTGATTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10597842 399 - 21366645 ACTGAAAGT------------------TTTTATTATGCATTAATACTAAGATGTCCATGTCCATGCTCATGCAGGACAGTAGAAGATAC--TTTTTTGACCAGTGTATCTATTGGTAACAATCGCTGCAAGGTTAGGAGCCAACTCATGTATTAGGCATGTAAATCTTGTGAAAATATTCATATTGAAAACAGCATGTGGCAAGTGCAAACAGGACCAAGTAAAT------------------------------------TCTTTA---------------TGACAGTCTC---------------------TTC-AAAGTATGAA------TTCTTCTCCTAGCATTACATCC------------------------TAATTTGATGAAATTC-----------------AAAAATATTTTATCTCAAT----TTTTTAAAAG--------------TGTTGATGCTGTATACA-------------------------------------------------TCGAGCTATTGTACAATTGAATGGAACCCACATTCAAAGATTTT-CCTCAATGTTAAAATTAAATTGTTCTCTCTGTAATTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3742021 398 - 13033340 AATGAAAGT------------------TTTTATTATGCATTAATACTAAGATGTCCATGTCCATGCTCATGCAGGACAGCAGAAGATAA--TTTTTTGACCAGTGTATCTATTGGTAACAATTGCTGCAAGGTTAGGAGCCAACTCATGTATTAGGCATGTAAATCTTGTGAAAATATTCATATTGAAAACAGCATGTGGCAAGTGCAAACAGGACCAAGTAAAT------------------------------------CCTTTA---------------TGACAGTCTC---------------------TTC-AAAGTATGAA------TTCTTCTCCTAGCATTACATCC------------------------TAATTTGATAAAATTC-----------------AAAAATATTTTATCTC-AT----TTTTTAAAAG--------------TGTTGATGCTGTATACA-------------------------------------------------TCGAGCTATTGTGCAATTGAATGGAACCCACATTCAAAGATTTT-CCTCAATATTTAAATTAAATGGTTCTCTCTGTAATTt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5233845 399 + 11604778 ACTGAAACT------------------TTTTATTATGTATAAATACTAAGATGTCCATGTCTATGCTCATGCAGGACAGCAGAAGATAA--TTTTTTGACCAGTGTATCTATTGGTAACAATTGCTGCAAGGTTAGAAGCCAACTCATGTATTAGGCATGTAAATCTTGTGAAAATATTCATATTGAAAACAGCATGTGGCAAGTGCAAACAGTACCAAGTAAAT------------------------------------TCTTTA---------------TGACAGTCTC---------------------TTC-AAAGTATGAA------TTCTTTTCCTAGCATTACATCC------------------------TAATTTGATAAAATTC-----------------AAAAATATTTTATCCCAAT----TTTTTAAAAG--------------TGTTGATGCTGTATACA-------------------------------------------------TCGAGCTATTGTACAATTGAATGGAACCCACATTCAAAGATTTT-CCTCAATGTTAAAATTAAGTGATTCTCTCCGTAATTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 136182 404 + 36342412 GCAGAACTT------------------CTTTATTCCGCATAACCACCA-------CATGCTCAGGCTCCCCTAGCATAGCAGAAGATGG--TTTTTTGACTAATTTATCTACTGGTAGCAATTGTGGCAAGGTCAGGGGCCACATCTTGTATTAGACATGTCAATCTTTCCAAAACATTCATATTGAAAATAATGTAGGAAAGGTGCAAACAGAACCCAATACAT------------------------------------TATTTG----T----------CAACAATTCC---------------------CCC-AAAATATTAA------TCCTTCTCCTAACATGACGTCC-----------------------AAAATTTGATAAAATCC-----------------AAAAAGATTTCATCTCAG--------TTAAAAAAAAAAAAAAACCATTTTTGATGTGGTATTTA-------------------------------------------------ATGAACTGTTGTATGACTGAATAGAACCTACATTCACTGTTCCT-CCTCAACATTTAAGGTAAATGATTCTCTCAGAGGTTC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13421846 558 + 40214260 CCTCCAATT------------------CCTTAATTTGCATAAACACCA-------CATGTCCATGCTCACCCCAGACAACAGAAGATAATTGTATTCTTCCAGTGTATATGCTGGTAAAAACTGCTGTAACGTCAGCAGCCAAGTCTTGTATTAAACATGTGAATCTTGTCAAAATATATGTATTGAAAACAGTGCACATCAAGTGCAGATAGAACCCGATAAACAGGGgggccccgggtggctcagcggtttggtgcctgcctttggcccagggtgcgatcctggagtcccgggatcgagtcccgcgtcgggctc-ctggcatggagtctgtttctccctctgtctgtatctctgcctctctctatgtctatcgtgaataagtaagtaaaatcttaaaaaaaaaGAACCCGATAAATATTTTATTACAAT----TTCTCCAAAA--------------TATTAATCCTTCTGGCATTACATCAAATGAAAGTGATTGTATCACGACTGGAAAAAAAATAAAAGTTTGTACTATTGCACAACTGAA-AGAACCCATGTTT-CAGTTTTT-CATCAGTGCTAAAATTAAATGTTCCTCTCTG--ATTC i canFam3.chr30 I 11 C 0 s dasNov3.JH579377 1810918 411 - 2868945 ACAGAAATTTTAAATACCCCAAATACCTTGTATATTGCATAATCATCA-------CATGTCCCCGCCCAGCTAGGACAGCAGAAGATAT-TATTTTCTGCCAGATTATATGATGAGAACAATTGTTCTAAGGTCAGGAGCCAAACCTTATATTAGACATCTATCTCTTGCCAAAACAAACCCATTGAAAACACTGTACAGCAAGTGAGAACAGAACCCAATAAAT------------------------------------GTTTAAATTTA----------TTGCAAACCC---------------------TCCTAAAATAGTAA------TCTTTCTCCTGGCATTATATCC------------------------AAATG----------------------------AAAGAGATTTTATCTCAATTGAAAATAAAATAG--------------TTCTGTTGCTTCATTTA-------------------------------------------------TTGAACTATTGTACAACTGAATAGAGCTCACATTCAAAACTTTTGCCTCAATGGTAAGATTAAATGTTCCTCTTTGTGATTC i dasNov3.JH579377 C 0 C 0 e manLeu1.NW_012108674v1 53873 360 + 2620224 I e macNem1.NW_012010577v1 13269037 375 - 40200012 M e rheMac8.chr7 23420218 379 + 169600520 I e cerAty1.NW_012000887v1 3257797 326 + 7633303 I e macFas5.chr7 24024205 361 + 171882078 I a score=602407.000000 s hg38.chrUn_KI270749v1 23074 101 + 158759 CTTC-TGTTTGCAGTTCTTCTCATTTCATTGTTAGAATTTGCCTCTACAAATGTAATTCATTT-GGCATTGCAGACGTTCTGATCTTTTCAAATGTGTA-TTTT s panTro5.chr1 101805467 100 - 228573443 TTTC-TGTTTGCAGTTC-TCTCATTTCATTGTTAGAATTTGCCTCTACTAATGTAATTAATTT-GGCATTGCAGACGTTCTGATATTTTCAAATGTTTA-TTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44382643 101 + 99763055 TTTC-TGTTTGCAGTTCTTTTCATTTCATTGTTAGAATTTGCCTCTACTAATGTAATTCATTT-GGCATTCCAGACGTTCTGCTCTTTTCAAATGTGTA-TTTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14098 100 - 24701 CTTC-TGTTTGCAGTTCTTCTCATTTCATTGTTAGAATTTGCCTCTAC-AATGTAATTCATTT-GGCATTGCAGACGTTCTGATCTTTTCAAATGTGTA-TTTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513160 101 - 121039945 TTCC-TGTTTGCAGTTCTTTTCATTTCATTGTTAGAATTTGCCTCTACTAATGTAATTCATTT-GGCATTCCAGACATTCTGCTCTTTTCAAATGTGTA-TTTT i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 21959473 101 - 58131712 TTTC-TGTTTGCAGTTCTTTTCATTTCATTGTTAGAATTTGCCTCTACTAATGTAATTCATTT-GGCATTCCAGGCATTCTACTCTTTTCAAATGTGTA-TTTT i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 2234511 101 + 10629787 TTTC-TGTTTGCAGTTCTTTTCATTTCATTGTTAGAATTTGCCTCTACTAATGTAATTCATTT-GGCATTCCAGGCGTTCTGCTCTTTTCAAATGTGTA-TTTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24196315 101 + 132174527 -TTTTCTTTCGCATTTGTTTTCATTTCATTGTTAGTATTTGCCTCTGCTAATGTAATTCATTT-GGCATTCCAGACATTCTGCTCTTTTCAAATGTATA-TTTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10598241 99 - 21366645 -TTT--CTTTGCATTTCTTTTCATTTCATTGTTAGTATTTGCCTCTGCTAATGTAATTTATTT-GGCATTCCAGACATTCTGCTCTTTTCAAATATATA-TTTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3742419 100 - 13033340 -ttt-cttttgcatttcttttcatttcattGTTAGTATTTGCCTCCGCTAATGTAATTTATTT-GGCATTCCAGACATTCTGCTCTTTTCAAATGTATA-TTTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5234244 100 + 11604778 -ttt-cttttgcatttcttttcatttcattGTTAGTATTTGCCTCTGCTAATGTAATTTATTT-GGCATTCCAGACATTCTGCTCTTCTCAAATGTATA-TTTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 136586 101 + 36342412 TCTC-TGTTTGTATTTCCTTTCATTCTGTTGTTAGAATTGGCCTCTGTTAATGGAATCCATTT-AGCATTCCAGGCTGTCTGCTCTTTTCAAATATGTA-TTAT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13422404 103 + 40214260 TCTG-TGTTTACATTCTTTTCCATTTAGCTATTTGAATTTGCCTCTACTAATGTAATCCATTTAAGCATTCTAGATTCTCTGCTCTTTTCAAATGTGTATTTTT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1811329 100 - 2868945 TCTG-TGTTTTCATTCTTTTTATTTTTGTTGCTAGAATTTGACTCTACTAAAATAGTCCACTC-AGCA-TCCAAGCTTTCTGTTCTTTTCAAACAGGCT-TTTT i dasNov3.JH579377 C 0 I 16 e manLeu1.NW_012108674v1 53873 360 + 2620224 I e macNem1.NW_012010577v1 13269037 375 - 40200012 M e rheMac8.chr7 23420218 379 + 169600520 I e cerAty1.NW_012000887v1 3257797 326 + 7633303 I e macFas5.chr7 24024205 361 + 171882078 I a score=112048.000000 s hg38.chrUn_KI270749v1 23175 26 + 158759 GACAGGTGCCTCATACATTCATCCTT s panTro5.chr1 101805567 26 - 228573443 CTCAGAGGCTTCAAACATTCATCCTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44382744 26 + 99763055 GACAGGTGCCTCAAACATTCATCCTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14198 26 - 24701 GACAGGTGCCTCAAACATTCATCCTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513261 26 - 121039945 GATAGGTGCCTCAAACATTCATCCTT i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 21959574 26 - 58131712 GGCAGGTGCCTCAAACATTAAACCTT i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 2234612 26 + 10629787 GGCAGGTGCCTCAAACGTTAAACCTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24196416 26 + 132174527 GACAAGTGCTTCAAAAATTCAAACTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10598340 26 - 21366645 GACAGGTGCCTCAAAAATTCAAACTC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3742519 26 - 13033340 GACAGGTGCCTCAAAAATTCAAACTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5234344 26 + 11604778 GACAGGTGCCTCAAAAATTCAAACTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 136687 26 + 36342412 GATAGGGACCCCAATCTTTCAACTTT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13422507 25 + 40214260 GATATGTATCTCG-ACTTTCAACCTT i canFam3.chr30 C 0 I 10 e manLeu1.NW_012108674v1 53873 360 + 2620224 I e macNem1.NW_012010577v1 13269037 375 - 40200012 M e rheMac8.chr7 23420218 379 + 169600520 I e dasNov3.JH579377 1811429 16 - 2868945 I e cerAty1.NW_012000887v1 3257797 326 + 7633303 I e macFas5.chr7 24024205 361 + 171882078 I a score=1468324.000000 s hg38.chrUn_KI270749v1 23201 362 + 158759 GGTTTG------tgctgtgggcctaaagtttatatctctccaaaactcatatattgaaatctaattcccag-tatgttggtgttaagatgtgaggccaggctggacacagtggctcac-acctgtaatcccagcactttgggaggccgaagtggacagatcatgaggtcaggagttcaagaccagcctggccaacatggtaaaaccccatctttactaaaaatacaaaaattagccaggtgtgg-------------------tggcacacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaaccagaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacagagcaaga s panTro5.chr1 101805593 362 - 228573443 GGTTTG------tgctgtgagctgaaagtttatatctctccaaaattcatatattgaagtctaattcctga-tatgttggtgttaagatgtgaggccaggctggacacagtggctcac-acctgtaatcccagcactttgggaggccgaagtggacagatcacgaagtcaggagttcaagaccagcctggccaacatggtaaaaccccatctctactaaaaatacaaaaattagccaggtgtgg-------------------tggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaagcagaggttgcagcgagctgagattgtgccactgcactccagcctgggcaacagagcaaga i panTro5.chr1 C 0 C 0 s panPan2.chr15 44382770 362 + 99763055 GGTTTG------tgctatgggctgaaagtttatatctctccaaaattcatatattgaaatctaattcccaa-tatgttggtgttaagatgtgaggccagtctggacacagtggctcac-acctgtaatcccagaactttgggaggccgaagtggacagatcacaaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatgg-------------------tggcacacgcctgtaatcccagctattcgggagactgaggcaggagaattgcttgagcctgggaagcagaggttgtagtgagctgagattgtgccactgcgctccggcctgggcaacagagcaaga i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14224 361 - 24701 GGTTTG------tgctgtgggcctaaagtttatatctctccaaaattcatatattgaaatctaattcccaa-tatgttggtgttaagatgtgaggccaggctggacacagtggctcac-acctgtaatcccagcactttgggaggccgaagtggacagatcacgaggtcaggagttcaagaccagcctggccaacatggtaaaaccccatctttactaaaaatacaaaaa-tagccaggtgtgg-------------------tggcacacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaaccagaggttgcagtgagctgagactgtgccactgcactccagcctgggcaacagagcaaga i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513287 362 - 121039945 GGTTTG------tgctatgggctgaaagcttatatctctccaaaattcatatattgaaatctaattcccaa-tatgttggtgttaagatgtgaggccaggctggacacagtggctcac-acctgtaatcccagcactttgggaggctgaagtggacagatcacaaggtcaggagttcaagaccagcatggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtgg-------------------tggcacacgcctgtaatcccagctactcgggagactgaggcaggagaattgcttgaaccctggaagcagaggttgtagtgagctgagattgtgccgctgcactccagcctgggcaacagagcaaga i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 21959600 362 - 58131712 GATTTG------tgctatgggctgaaactttacatctctccaaaattcatatattgagatctaattcccaa-tatgttggtgttaagatgtgaggccAggctggacacagtggctcat-gcctgtaatcccggcactttgggaggctgaagtggacagatcacgaggtcaagagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatgg-------------------tggcatgtgcctgtaatcccagctacttgggaagatgaagcaggagaattgcttgaacctgggaagcagaggttgcagtgagctgagattgtgccactgcacttcagcctgggcaacagagcaaga i chlSab2.chr26 C 0 I 192 s colAng1.NW_012121598v1 2234638 361 + 10629787 GATTTG------tgctatgggctgaaactttacatctctccaaaattcgtgtattgaaatctaattcccaa-tatgttggtgttaagatgtgaggccaggctggacacagtggctcat-gcctgtaatcccagcagtttgggaggctgaagtggacagatcacgaggtcaagagttcaagaccagcctgtccaacatggtgaaaccccatctctactaaaaatacaaaaa-tagccaggcgtgg-------------------tggcttgtgcctgtaatcccagctactcgggaagatgaagcaggagaattgcttgaacctgggaagcaaaggttgcagtgagctgaggttgtgccactgcactccagcctgggcaacagagcaaga i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24196442 360 + 132174527 GATTTG------tgctaggggctcactgtttatagctctct-aagttcatatattgaaatggaattcccaa-tatattggtgttaagaggtgaggccaggctgaccacggtggctccc-acctgtaatcccagcactttgggagtctgacatggttggatcacatggtcaggagttctagaccagcctggccaacatggag-aatgccatctctattaaaaatacaaacattagccaggtgttg-------------------tggcacactcctgtaatccaagctacttggaaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagatcatgccactacactccagcctgggtgacatagcaaga i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10598366 380 - 21366645 GATTTG------tgctaggggctcaatgtttatagctctct-aagttcatatattgaaacggaattcccaa-tatgttggtgttaagaggtgaggccaggctgagtgcagtggctcac-acccataatcccagcactttgggaggctgacatggatggatcaaatggttaggagttctagaccagcctggccaacatggtgaaatgccatctctattaaaaatacaaaaattagccacttgtggctaattttaggacaaaaattagcacactcctataattccagctacttggaaggctgaggcaggagaactgcttgaacccaggagtcagaggttgcagtgagccgagatcatgccactgctctctagcctgggcgacatagcaaga i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3742545 381 - 13033340 GATTTG------tgctaggggctcaatgattatagctctct-aagttcatatattgaaatggaattcccaattatgttggtgttaagaggtgaggccaggctgagcatggtggctcac-acctgtaatcccagcgctttgggaggctgacatggatggatcacatggtcaggagttctagaccagcctggccaacatggtgaaatgccatctctattaaaaatgcaaaaattagccaggcatggctaattttagcacaaaaattagcacactcctgtaatcccagctacttggaaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggcaacatagcaaga i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5234370 361 + 11604778 GATTTG------tgctaggggctcaatgtttatagctctct-aagttcatatattgaaatggaattcccaa-tatgttggtgttaagaggtgaggccaggctgagcatggtggctcac-acctgtaatcccagcactttgggaggctgacatggatggatcacatggtcaggagttctagaccagcctggtcaacatggtgaaatgccatctctattaaaaatacaaaacttagccaggtgtag-------------------tggcacactcctataatcccagctacttggaaggctgaggcaagagaattgcttgaacctgggaggcagaggttgcagtgagctgagatcatgccactgcactccagcctgggcgacatagcaaga i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 136713 139 + 36342412 TGGTTGAAATTATGCTATTGGCCAAATGTTGGTGTCCTTCT---------------------------TAA-T----------------------------------cagcggttctcaacctgt-------------------------------gggtca------caggaat------------------------------------tgtattaaaga------------------gttg-------------------tggc--------------------attaggaaggttgaga----------------------------------------------------accactg--ttctaaattg----atacagtgaaa i otoGar3.GL873530 C 0 C 0 e manLeu1.NW_012108674v1 53873 360 + 2620224 I e macNem1.NW_012010577v1 13269037 375 - 40200012 M e rheMac8.chr7 23420218 379 + 169600520 I e canFam3.chr30 13422532 10 + 40214260 I e dasNov3.JH579377 1811429 16 - 2868945 I e cerAty1.NW_012000887v1 3257797 326 + 7633303 I e macFas5.chr7 24024205 361 + 171882078 I a score=12238.000000 s hg38.chrUn_KI270749v1 23563 27 + 158759 -------ctccatctc--------aataaataaataaataaa s panTro5.chr1 101805955 35 - 228573443 -------ctctatctcaataaataaataaataaataaataaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383132 16 + 99763055 -------ctccatctc-------------------aaataaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14585 27 - 24701 -------ccccatctc--------aataaataaataaataaa i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513649 12 - 121039945 -------ctccatctc-----------------------aaa i nomLeu3.chr6 C 0 C 0 s colAng1.NW_012121598v1 2234999 27 + 10629787 -------ccccAGAGG--------GAGAGAGAGAGAATGAaa i colAng1.NW_012121598v1 C 0 I 76 s calJac3.chr10 24196802 17 + 132174527 -------ctccatctc--------a----------aaataaa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10598746 22 - 21366645 -------ctccatctc--------a-----aaaataaataaa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3742926 22 - 13033340 -------ctccatctc--------a-----aaaataaataaa i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5234731 24 + 11604778 -------ctccatctc--------aa---aaaaataaataaa i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 136852 12 + 36342412 tctaatcctcaa------------------------------ i otoGar3.GL873530 C 0 C 0 e manLeu1.NW_012108674v1 53873 360 + 2620224 I e macNem1.NW_012010577v1 13269037 375 - 40200012 M e rheMac8.chr7 23420218 379 + 169600520 I e canFam3.chr30 13422532 10 + 40214260 I e dasNov3.JH579377 1811429 16 - 2868945 I e chlSab2.chr26 21959962 192 - 58131712 I e cerAty1.NW_012000887v1 3257797 326 + 7633303 I e macFas5.chr7 24024205 361 + 171882078 I a score=5967.000000 s hg38.chrUn_KI270749v1 23590 3 + 158759 --taa s panTro5.chr1 101805990 3 - 228573443 --taa i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383148 3 + 99763055 --taa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14612 3 - 24701 --taa i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513661 3 - 121039945 --taa i nomLeu3.chr6 C 0 C 0 s calJac3.chr10 24196819 3 + 132174527 --taa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10598768 3 - 21366645 --taa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3742948 3 - 13033340 --taa i cebCap1.NW_016107324v1 C 0 I 50 s aotNan1.NW_018501505v1 5234755 3 + 11604778 --taa i aotNan1.NW_018501505v1 C 0 I 46 s otoGar3.GL873530 136864 3 + 36342412 tgt-- i otoGar3.GL873530 C 0 C 0 e manLeu1.NW_012108674v1 53873 360 + 2620224 I e macNem1.NW_012010577v1 13269037 375 - 40200012 M e rheMac8.chr7 23420218 379 + 169600520 I e canFam3.chr30 13422532 10 + 40214260 I e dasNov3.JH579377 1811429 16 - 2868945 I e colAng1.NW_012121598v1 2235026 76 + 10629787 I e chlSab2.chr26 21959962 192 - 58131712 I e cerAty1.NW_012000887v1 3257797 326 + 7633303 I e macFas5.chr7 24024205 361 + 171882078 I a score=8466.000000 s hg38.chrUn_KI270749v1 23593 11 + 158759 ------ataaataaata s panTro5.chr1 101805993 11 - 228573443 ------ataaataaata i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383151 11 + 99763055 ------ataaataaata i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14615 11 - 24701 ------ataaatgaata i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513664 11 - 121039945 ------ataaataaata i nomLeu3.chr6 C 0 C 0 s calJac3.chr10 24196822 9 + 132174527 ------ataaataaa-- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10598771 9 - 21366645 ------ataaataaa-- i saiBol1.JH378136 C 0 C 0 s otoGar3.GL873530 136867 11 + 36342412 gctggtgttga------ i otoGar3.GL873530 C 0 C 0 e manLeu1.NW_012108674v1 53873 360 + 2620224 I e macNem1.NW_012010577v1 13269037 375 - 40200012 M e rheMac8.chr7 23420218 379 + 169600520 I e aotNan1.NW_018501505v1 5234758 46 + 11604778 I e cebCap1.NW_016107324v1 3742951 50 - 13033340 I e canFam3.chr30 13422532 10 + 40214260 I e dasNov3.JH579377 1811429 16 - 2868945 I e colAng1.NW_012121598v1 2235026 76 + 10629787 I e chlSab2.chr26 21959962 192 - 58131712 I e cerAty1.NW_012000887v1 3257797 326 + 7633303 I e macFas5.chr7 24024205 361 + 171882078 I a score=4309.000000 s hg38.chrUn_KI270749v1 23604 2 + 158759 gg s panTro5.chr1 101806004 2 - 228573443 aa i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383162 2 + 99763055 gg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14626 2 - 24701 gg i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513675 2 - 121039945 gg i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 24024566 2 + 171882078 ga i macFas5.chr7 I 361 C 0 s calJac3.chr10 24196831 2 + 132174527 gg i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10598780 2 - 21366645 gg i saiBol1.JH378136 C 0 C 0 s otoGar3.GL873530 136878 2 + 36342412 gg i otoGar3.GL873530 C 0 C 0 e manLeu1.NW_012108674v1 53873 360 + 2620224 I e macNem1.NW_012010577v1 13269037 375 - 40200012 M e rheMac8.chr7 23420218 379 + 169600520 I e aotNan1.NW_018501505v1 5234758 46 + 11604778 I e cebCap1.NW_016107324v1 3742951 50 - 13033340 I e canFam3.chr30 13422532 10 + 40214260 I e dasNov3.JH579377 1811429 16 - 2868945 I e colAng1.NW_012121598v1 2235026 76 + 10629787 I e chlSab2.chr26 21959962 192 - 58131712 I e cerAty1.NW_012000887v1 3257797 326 + 7633303 I a score=4490.000000 s hg38.chrUn_KI270749v1 23606 3 + 158759 ggc s panTro5.chr1 101806006 3 - 228573443 gga i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383164 3 + 99763055 gga i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14628 3 - 24701 agc i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513677 3 - 121039945 gga i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 24024568 3 + 171882078 gga i macFas5.chr7 C 0 C 0 s colAng1.NW_012121598v1 2235102 3 + 10629787 gga i colAng1.NW_012121598v1 I 76 C 0 s calJac3.chr10 24196833 3 + 132174527 tga i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10598782 3 - 21366645 tga i saiBol1.JH378136 C 0 C 0 s otoGar3.GL873530 136880 3 + 36342412 tga i otoGar3.GL873530 C 0 C 0 e manLeu1.NW_012108674v1 53873 360 + 2620224 I e macNem1.NW_012010577v1 13269037 375 - 40200012 M e rheMac8.chr7 23420218 379 + 169600520 I e aotNan1.NW_018501505v1 5234758 46 + 11604778 I e cebCap1.NW_016107324v1 3742951 50 - 13033340 I e canFam3.chr30 13422532 10 + 40214260 I e dasNov3.JH579377 1811429 16 - 2868945 I e chlSab2.chr26 21959962 192 - 58131712 I e cerAty1.NW_012000887v1 3257797 326 + 7633303 I a score=30959.000000 s hg38.chrUn_KI270749v1 23609 4 + 158759 ggtc s panTro5.chr1 101806009 4 - 228573443 ggtc i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383167 4 + 99763055 ggtc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14631 4 - 24701 ggtc i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513680 4 - 121039945 ggtc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23420597 4 + 169600520 ggtc i rheMac8.chr7 I 379 C 0 s macFas5.chr7 24024571 4 + 171882078 ggtc i macFas5.chr7 C 0 C 0 s cerAty1.NW_012000887v1 3258123 4 + 7633303 ggtc i cerAty1.NW_012000887v1 I 326 C 0 s chlSab2.chr26 21960154 4 - 58131712 ggtc i chlSab2.chr26 I 192 C 0 s manLeu1.NW_012108674v1 54233 4 + 2620224 ggtc i manLeu1.NW_012108674v1 I 360 C 0 s colAng1.NW_012121598v1 2235105 4 + 10629787 ggtc i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24196836 4 + 132174527 ggcc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10598785 4 - 21366645 ggcc i saiBol1.JH378136 C 0 C 0 s otoGar3.GL873530 136883 4 + 36342412 gatc i otoGar3.GL873530 C 0 C 0 e macNem1.NW_012010577v1 13269037 375 - 40200012 M e aotNan1.NW_018501505v1 5234758 46 + 11604778 I e cebCap1.NW_016107324v1 3742951 50 - 13033340 I e canFam3.chr30 13422532 10 + 40214260 I e dasNov3.JH579377 1811429 16 - 2868945 I a score=190104.000000 s hg38.chrUn_KI270749v1 23613 28 + 158759 tttgggatgtgagtaggttaagg----gggtt s panTro5.chr1 101806013 28 - 228573443 tttgggatatgagtaagtttagg----gggtt i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383171 28 + 99763055 tttgggatgtgagtgggttatgg----ggggt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14635 28 - 24701 tttgggatgtgagtaggttaagg----gggtt i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513684 28 - 121039945 tttgggatgtgagtaggttatgg----ggggt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23420601 28 + 169600520 tttgggatgtgagtaggtcatgg----ggggt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24024575 28 + 171882078 tttgggatgtgagtaggtcatgg----ggggt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13269412 28 - 40200012 tttgggatgtgagtaggtcatgg----ggggt i macNem1.NW_012010577v1 M 375 C 0 s cerAty1.NW_012000887v1 3258127 28 + 7633303 tttgggatgtgagtaggtcatgg----ggggt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21960158 28 - 58131712 tttgggatgtgagtaggtcatgg----ggggt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 54237 28 + 2620224 tttgggatgtgagtaggtcatgg----ggggt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2235109 28 + 10629787 tttgggatgtgagtaggtcatgg----ggggt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24196840 32 + 132174527 ttttggatataagtaggtcatggcacgggagt i calJac3.chr10 C 0 I 4 s saiBol1.JH378136 10598789 32 - 21366645 ttttggatataagtaggtcatggcacaggagc i saiBol1.JH378136 C 0 I 4 s otoGar3.GL873530 136887 25 + 36342412 tttgctatgttactaggtaaaga----gt--- i otoGar3.GL873530 C 0 C 0 e aotNan1.NW_018501505v1 5234758 46 + 11604778 I e cebCap1.NW_016107324v1 3742951 50 - 13033340 I e canFam3.chr30 13422532 10 + 40214260 I e dasNov3.JH579377 1811429 16 - 2868945 I a score=2486871.000000 s hg38.chrUn_KI270749v1 23641 247 + 158759 ggggagccgtcatgaatgggttagtccccttataaaagaacccatagggagctactttgccccttttgcccttatgccatgtgaagatgcagcagtaagtt--------tgagaaacaaa-cctcaccaggtaacaactctgctggcacctagatcttggacttcccaacccccagaactgagaataataaatttg----gtttataaattacccagtctaaggtaatttgttacagcagt-ccaaatggactcaaacaGG s panTro5.chr1 101806041 247 - 228573443 ggggagccgtcatgaatgggttagtccccttataaaagaacccatagggagctactttgccccttttgcccttatgccatgtgaagatgcagcagtaagtt--------tgagaaacaaa-cctcaccaggtaacaactctgctggcaccttgatcttggacttcccaacccccagaactgagaataataaatttg----gtttataaattacccagtctaaggtaatttgttatagcagt-ccaaatcgactcaaacaGC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383199 247 + 99763055 gggaaggcctcatgaatggattagtccccttataaaagaacccttccggagctactttgccacttttgcccttatgccacgtgaagatgcagcagtaagtt--------taagaaacaaa-ccttaccagataacaactctgctggcaccttgatcttggacttcccaaccttcagaactgagaacaataaattct----gtttataaattacccagtctaaggtaatttgttacagcagt-ccaaatggactcaaacaGG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14663 246 - 24701 ggggagccgtcatgaatgggttagtccccttataaaagaacccatagggagctactttgccccttttgcccttatgccatgtgaagatgcagcagtaagtt--------tgaaaaacaaa-cctcaccaggtaac-actctgctggcacctagatcttggacttcccaacccccagaactgagaataataaatttg----gtttataaattacccagtctaaggtaatttgttacagcagt-ccaaatggactcaaacaGG i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513712 246 - 121039945 ggggagccttcatgaatgcattagtcccctcataaaa-aacccttagggagctactttgccccttttgcccttatgccacgtgaagatgcagcagtaagtt--------tgagaaacaaa-cctcaccagataacaactctgctggcaccttgatcttggacttcccaacccccagaactgagaacaataaattct----gtttataaattacccagtctaaggtaatttgttacagcagt-ccagatagactcaaacaGG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23420629 248 + 169600520 ggggagccctcatgaatgggttagcacccttataaaagaacccttagggagctactttgccccttttgcccttatgccatgtgaagatgcagcagtaagtt--------tgagaaacaaa-cctcatcagataacaactctgctggttccttgatcttggacttcccaactcccagaacggagaacaataatttct----gtttataaattacccagtctaaggtaatttgttacagcagtcccaaatggactcaagcaGG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24024603 247 + 171882078 ggggagccctcatgaatgggttagcacccttataaaagaacccttagggagctactttgccccttttgcccttatgccatgtgaagatgcagcagtaagtt--------tgagaaacaaa-cctcatcagataacaactctgctggttccttgatcttggacttcccaactcccagaacggagaacaataatttct----gtttataaattacccagtctaaggtaatttgttacagcagt-ccaaatggactcaagcaGG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13269440 247 - 40200012 ggggagccctcatgaatgggttagcacccttataaaagaacccttagggagctactttgccccttttgcccttatgccatgtgaagatgcagcagtaagtt--------tgagaaacaaa-cctcatcagataacaactctgctggttccttgatcttggacttcccaactcccagaacggagaacaataatttct----gtttataaattacccagtctaaggtaatttgttacagcagt-ccaaatggactcaagcaGG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3258155 247 + 7633303 ggggagccctcatgaatgggttagcacccttataaaagaacccttagggagctactttgccccttttgcccttatgccatgtgaagatgcagcagtaagtt--------tgagaaacaaa-cctcatcagataacaactctgctggttccttgatgttggacttcctaacccccagaacggagaacaataatttct----gtttataaattaccctgtctaaggtaatttgttacagcagt-ccaaatggactcaaacaGG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21960186 247 - 58131712 ggggagccctcatgaatgggttagcacccttataaaagaacccttagggagctactttgccccttttgcccttatgccatgtgaagatgcagcagtaagtt--------tgagaaacaaa-cctcatcagataacaactctgctggttctttgatcttggacttcccaacccccagaacggagaacaataatttct----gtttataaattacccagtctaaggtaatttgttacagcagt-ccaaatggactcaaacaGG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 54265 247 + 2620224 ggggagccctcatgaatgggttagcacccttataaaagaacccttagggagctactttgccccttttgcccttatgccatgtgaagatgcagcagtaagtt--------tgagaaacaaa-cctcatcagataacaactctgctggttccttgatcttggacttcccaatccccagaacggagaacaataatttct----gtttataaattacccagtctaaggtaatttgttacagcagt-ccaaatggactcaaacaGG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2235137 247 + 10629787 ggggaaccctcatgaatgggttagcacccttataaaagaacgcttagggagctactttgccccttttgcccttatgccatgtgaagatgcagcagtaagtt--------tgagaaacaaa-cctcatcagataaaatctctgttggctccttgatcttggacttcccaacccccagaactgagaacaataatttct----gtttataaattacccagtctaaggtaatttgttacagcagt-ccaaatggactcaaacaGG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24196876 254 + 132174527 ggggagccttcatgaataatttagtgcccttataaaagaatccttaggaagctagttttccccttttgcccttatgccatgtgaagatacagcagtaaggtgccatctatgagaaacaaa-cctcaccagataccaact-tgctggcaccttagttttggacttcccaaccctcagaactgtgaacaataaattct----gtttataaattacacagtctaacgtaatttgttatagcagt-ctaaatggactaaaaTGGG i calJac3.chr10 I 4 C 0 s saiBol1.JH378136 10598825 255 - 21366645 ggggaaccttcatgaataatttagtgcccttatgaaagaacccttaggaagctagtttgccccttttacccttatgccatgtgaagatgcagcagtaaggtgccatctatgagaaacaaa-cctcaccagataccaactctgctggcaccttaattttggacttcccaaccctcagaactgtgaacaataaattct----gtttataaattacacagtcaaaggtaatttgttatagcagt-ctaaatggactaaaaTGGG i saiBol1.JH378136 I 4 C 0 s cebCap1.NW_016107324v1 3743001 255 - 13033340 ggggaaccttcatgaataatttagtgcccttattaaagaaccctgaggaagctagtttgccccttttacccttatgtcatgtgaagatgcagcagtaaggtaccatctatgagaaacaaa-cctcaccagataccaactctgctggcaccttgattttggacttcccaaccctcagaactgtgaacaataaattct----gtttataaattacacagtctaaggtaatttgttatagcagt-ctaaatggactaaaacGGG i cebCap1.NW_016107324v1 I 50 C 0 s aotNan1.NW_018501505v1 5234804 255 + 11604778 ggggagccttcatgaataatttagtgcccttataaaagaacccttaggaagctagtttgccccttttgcccttatgccatatgaagatgcagcagtaaggtgccatctatgagaaacaaa-cctcaccatataccaactctgctggcaccttgattttggacttcccaatcctcagaactgtgaacaataaattct----gtttataaattacacagtctaaagtaatttgttatagcagt-ctaaatggactaaaaTGGG i aotNan1.NW_018501505v1 I 46 C 0 s otoGar3.GL873530 136912 233 + 36342412 ggggagtcctcatgaaaagcatggtgcatttataaaagaggc---agagggcctctttg-------tgcctttctgtcatgtgagaacacagtaagaagataccatctaggaggaatgaaccctcaacagatacacagtctgctgg----------------tgcccaacatccagaactgtgagcagtaaatttccctggtttatatattatacaatctaagggattttgttataacagT-GATTAT-GACTAAAATAGG i otoGar3.GL873530 C 0 C 0 e canFam3.chr30 13422532 10 + 40214260 I e dasNov3.JH579377 1811429 16 - 2868945 I a score=37247.000000 s hg38.chrUn_KI270749v1 23888 3 + 158759 TTG s panTro5.chr1 101806288 3 - 228573443 TTG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383446 3 + 99763055 TTG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14909 3 - 24701 TTG i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513958 3 - 121039945 TTG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23420877 3 + 169600520 TTG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24024850 3 + 171882078 TTG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13269687 3 - 40200012 TTG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3258402 3 + 7633303 TTG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21960433 3 - 58131712 TTG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 54512 3 + 2620224 TTG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2235384 3 + 10629787 TTG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24197130 3 + 132174527 TTG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10599080 3 - 21366645 TTG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3743256 3 - 13033340 TTG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5235059 3 + 11604778 TTG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 137145 3 + 36342412 CTG i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1811445 3 - 2868945 TTC i dasNov3.JH579377 I 16 C 0 e canFam3.chr30 13422532 10 + 40214260 I a score=1774408.000000 s hg38.chrUn_KI270749v1 23891 167 + 158759 TAAACACTT----G----AAAAA-------TGAGTATCTGTATTGAATCGCATATTTTAGCCGTAGTTTGCTTGTAGGAGTACAGCCTATGGCCAAAGAA--TT-AATAGCTGA-------CTCTCATTT-GAATGGCCAAGATTTGCTCTCTATTTCCAGTATTTTATTTTTGTGCCTGT-ATGTTGGATACA s panTro5.chr1 101806291 163 - 228573443 TAAACACTT----G----AAAAA-------TGAGTATCTGTATTGAATAGCATATTTTAGCCAAAGTTTTCTTGTAGAAATACAGCCTACGGCCCAAGAA--TT-AATAGCTGA-------CTCTCATTT-GAATGGCCAAGATTTG----CTATTTCCAATATTTTATTTTTGTGCCTGT-ATGTTGGACATA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383449 169 + 99763055 TAAACACTT----GA--AAAAAA-------TGAGTATCTGTATTGAATCACATATTTTAGCCAAAGTTTGCTTGTAGGAATACAGCCTATGGCCAAAGAA--TT-AATAGCTGA-------CTCTCATTT-GAATGGCCAAGATTTGTTCTTTATTTCCAATATTTTATTTGTGTGCCTGT-ATGTTGGACATA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 14912 169 - 24701 TAAACACTT----G----AAAAA-------TGAGTATCTGTATTGATTCGCATATTTTAGCCATAGTTTGCTTGTAGGAGTACAGCATATGGCCAAAGAATTTT-AATAGCTGA-------CTCTCATTT-GAATGGCCAAGATTTGCTCTCTATTTCCAGTATTTTATTTTTGTGCCTGT-ATGTTGGATACA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67513961 169 - 121039945 TAAACACTT----GA--AAAAAA-------TGAGTATCTGTATTGAATCACATATTTTAGCCAAAGTTTGCTTGTAGGAATACAGCCTATGGCCAAAGAA--TT-AATAGCTGA-------CTCTCATTT-GAATGGCCAAGATTTGTTCTCTATTTCCAATGTTTTATTTTTGTGCCTGT-ATGTTGGGCATA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23420880 169 + 169600520 TAAACACTT----GA--AAAAAA-------TGAGTATCTGTATTGAGTCACATGTTTTAGCCAAAGTTTGCTTGTAGGAATACAGCCTATGACCAAAGAA--TTAAATAGCTAA-------CTCTCATTT-GAATGGCCAAGATTTGCTCTCTATTTCCAATA-TTTATTTTTGTGCCTGT-ATGTTGGACACA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24024853 168 + 171882078 TAAACACTT----GA--AAAAAA-------TGAGTATCTGTATTGAGTCACATGTTTTAGCCAAAGTTTGCTTGTAGGAATACAGCCTATGACCAAAGAA--TT-AATAGCTAA-------CTCTCATTT-GAATGGCCAAGATTTGCTCTCTATTTCCAATA-TTTATTTTTGTGCCTGT-ATGTTGGACACA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13269690 168 - 40200012 TAAACACTT----GA--AAAAAA-------TGAGTATCTGTATTGAGTCACATGTTTTAGCCAAAGTTTGCTTGTAGGAATACAGCCTATGACCAAAGAA--TT-AATAGCTAA-------CTCTCATTT-GAATGGCCAAGATTTGCTCTCTATTTCCAATA-TTTATTTTTGTGCCTGT-ATGTTGGACACA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3258405 167 + 7633303 TAAACACTT----GA--AAAAAA-------TGAGTATCTGTATTGAGTCACATATTTTAGCC-AAGTTTGCTTGTAGGAATACAGCCTATGACCAAAGAA--TT-AATAGCTAA-------CTCTCATTT-GAATGGCCAAGATTTGCTCTCTATTTCCAATA-TTTATTTTTGTGCCTGT-ATGTTGGACATA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21960436 168 - 58131712 TAAACACTT----GA--AAAAAA-------TGAGTATCTGTATTGAGTCACATATTTTAGCCGAAGTTTGCTTGTAGGAATACAGCCTATGACCAAAGAA--TT-AATAGCTAA-------CTCTCATTT-GAATGGCCAAGATTTGCTCTCTATTTCCAATA-TTTATTTTTGTGCCTGT-ATGTTGGACATA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 54515 167 + 2620224 TAAACACTT----GA--AAAAAA-------TGAGTATCTGTATTGAGTCACGTATTTTAGCC-AAGTTTGCTTGTAGGAATACAGCCTATGACCAAAGAA--TT-AATAGCTAA-------CTCTCATTT-GAATGGCCAAGATTTGCTCTCTATTTCCAATA-TTTATTTTTGTGCCTGT-ATGTTGGACATA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2235387 168 + 10629787 TAAACACTT----GA--AAAAAA-------TGAGTATCTGTATTGAGTCACATATTTTAGCCAAAGTTTGCTTGTAGGAATACAGCCTATGACCAAAGAA--TT-AATAGCTAA-------CTCTCATTT-GAATGGCCAAGATTTGCTCTCTATTTCCAATA-TTTATTATTGTGCCTGT-ATGTTGGACATA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24197133 166 + 132174527 TAAACTCTT----GG--GAAAAA-------ATAGTATCTGTATTGAGTCACATATTTTAGCTAAAGTTTGCTTGTAGAAATAGAGCCTATGGCCAAAGAA--TT-AATAGTTGA-------CTCTCATTT-GAATGGCCAAGATTTG----CTATTTTCAGTATTTTATTTTTGTGCATGTAATGTTGGACATG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10599083 167 - 21366645 TAAACACTT----GG-AAAAAAA-------ATAGTATCTGTACTGAATCACATATTTTAGCTAAAGTTTGCTTGTAGAAATACAGCCTATGGCCAAAGAA--TT-AATAGCTGA-------CTCTCATTT-GAATGGCCAGGATTTG----CTATTTTCAGTGTTTTATTTTTGTGCATGTAATGTTGGGCATG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3743259 166 - 13033340 TAAACACTT----GG--AAAAAA-------ATAGTATCTGTATTGAATCACATATTTTAGCTAAAGCTTGCTTGTGGAAATACAGCCTATGGCCAAAGAA--TT-AATAGCTGA-------CTCTCATTT-GAATGGCCAAGATTTG----CTATTTTCAGTATTTTTTTTGTGTGTATGTAACGTTGGACATG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5235062 167 + 11604778 TAAACACTT----GA-AAAAAAA-------ATAGTATCTGTATTGAATCACATATTTTAGCTAAAGTTTGCTTATAGAAATACAGCCTATGGCCAAAGAA--TT-AATAGCTGA-------CTCTCATTT-GAATGGCCAAGATTTG----CTATTTTCAGTATTTTATTTTTGTGCATGTAATGTTGGACATG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 137148 160 + 36342412 TGAATATTTTTGGAA--AAAAAA-------TTAATATTTGTGTTATATCACCTACTTTAACTGAAATTTGCTCCTAGGAATAT-------------AGAA--TT-AATAGCTGA-------CTGACATTCAGAATGGCCAAGATTT-CTTTCTATTTCCAATATTTTGTCTTTAACCGTAT-GTATTGAGCATA i otoGar3.GL873530 C 0 I 121 s canFam3.chr30 13422542 135 + 40214260 TAAACATTT----GTGGAAGAAA-------ACAGTATTTGTATTGAATCACATATTCTAGC-AAAATTTGCTTGTAGAAAAATAGCCCAAAGCCAAAGAA--TA-GCCACCTGA-------CATTTA----GAATAGCC--------------------------------TTGAGCGCAA-GTGTTAGATATA i canFam3.chr30 I 10 C 0 s dasNov3.JH579377 1811448 181 - 2868945 TAAATATTT----TT--AGAAAAAACAGTTTTAATGTTTGTATTGAATTACATCTTTAA--TAAAATGTGCTTGTCG-AATACAGCCTAATGCCAAAAAA--AT-GATACCTGAAAGATTGACATCATTTAGAATGGCCAAGTTTTGCTCCCTATTCTTAATATTTTGTTTTTGAGCATTT-GTATTAGACATG i dasNov3.JH579377 C 0 C 0 a score=3620005.000000 s hg38.chrUn_KI270749v1 24058 321 + 158759 GGCAAATTTTTAC------AC-AATAAACCAGAAAAGTTCAATAGTC-TTTC-ATTCTCTGCTTTCACTAAC--------TTCTTTTAAGTATATTTCAACAATTATCTTAATATTATCACCAGTAGATTAAGCGTACTGTTATAAACACTC--TTTCTATTTATTCAAAGCTTGAATTGAGCTAGCTGCTAATAACATTTTTTTAATTAGCATTGCAACCA-TATTCACCTACCATATTTTTCC----CTCTCCTTTGATTTCTGGGCCATTACTCACTTTCA---CAA---TTTGTATGTGACTCA---CCATTCTATACCTACTTTTGCCTTACCTTAAAATATTTTTTGA s panTro5.chr1 101806454 323 - 228573443 GGCAAATTTTTAC------AA-AACAAACCAGAAAAGTTCAATAGTC-TTTC-ATTCTCTGCTTTCACTAAT--------TTCTTTTAAGTATATTTCAACAATTATCTTACTATTGTCACCTGTAGATTAAGCATACTGTTATAAACACTCTATTTCTATTTATTCAGAGCTTGAATTGAGCTAGCTGCTAATAACATTTTTTTAATTAGCATTGCAACCA-TATTCACCGACCATATTTTTCC----CTCTCCTTTGATTTCTGGGCCATTACTCACTTTCA---CAA---TTTGTATGTGACTCA---CAGTTCTATACCTACTTTTGCCTTACCTTAAAATATTTTTTGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383618 319 + 99763055 GGCAAATTTTTAC------AA-AACAAACCAGAAAAGTTCAATAGTC-TTTC-ATTCT---CTTTCGCTAAC--------TTCTTTTAAGTATATTTCAACAATTATCTTAATATTGTCATCAGTAGATTAAGTGTACTGTTATAAACACTCTATTTCTATTTATTCAAAGCTTGAATTGAGCTAGCTGCTAATAACA-TTTTTTAATTAGCATTGCAACCA-TATTCACCTACCATATTTTTCC----CTCTCCTTTGATTTCTGGGCCATTACTCACTTTCA---CAA---TTTGTATGTGACTCA---CCATTCTATACCTACTTTTGCCTTACCTTAAAATATTTTTTGA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15081 315 - 24701 GGCAAATTTTTAC------AC-AATAAACCAGAAAAGTTCAATAGTC-TTTC-ATTCTCT-CTTTCACTAAC--------TTCTTTTAAGTATATTTCAACAGTTATCTTAATATCATCACCAGTAGATTAAGCGTACTGTTATAAACACTC------TATTTATTCAAAGCTTGAATTGAGCTAGCTGCTAATAACA-TTTTTTAATTAGCATTGCAACCA-TATTCACCTACCATATTTTTCC----CTCTCCTTTGATTTCTGGGCCATTACTCACTTTCA---CAA---TTTGTATGTGACTCA---CCATTCTATACCTACTTTTGCCTTACCTTAAAATATTTTTTGA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514130 319 - 121039945 GGCAAATTTTTAC------AA-AACAAACCAGAAAAGTTCAATAGTC-TCTC-CTTCT---CTTTCACTAAC--------TTCTTTTAAGTATATTTCAACAATGATCTTAATATTGTCACCAGTAGATTAAGCGTACTGTTATAAACACTCTATTTCTATTAATTCAAAGCTTGAATTGAGCTAGCTGCTAATAACA-TTTTTAAATTAGCATTACAACCA-TATTCACCTACCGTATTTTTCC----CTCTCCTTTGATTTCTGGGCCATTACTCACTTTCA---CAA---TTTGTATGTGACTCA---CCGTTCTATACCTACTTTTGCCTTACCTTAAAATATTTTTTGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421049 317 + 169600520 GACAAATTTTTAT------A-----AAACCAGAAAAGTTCAATAGTC-TTTC-ATTCTCTGCTTTCACTAAC--------TTCTTTTAAGTATATTTCAACAATTATCTTAATATTGTCACCAGTAGATTAAGAGTACTGTTATAAACACTCTATTTCTATTTATTCAAAGCTTGAATTGAGCAAGCTGCTAATAACA-TTTTTTAATTAGCATTGCAACCA-TATTCACCTACCATATTTTTCC----CTCTCCTTTGCTTTCTGGGCCATTACTCACTTTCA---CGA---TTTGTATGTGACTCA---CTATTCTATACCTACTTTTCCTTTACCTTAAAATATTTTTT-A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025021 317 + 171882078 GACAAATTTTTAT------A-----AAACCAGAAAAGTTCAATAGTC-TTTC-ATTCTCTGCTTTCACTAAC--------TTCTTTTAAGTATATTTCAACAATTATCTTAATATTGTCACCAGTAGATTAAGAGTACTGTTATAAACACTCTATTTCTATTTATTCAAAGCTTGAATTGAGCAAGCTGCTAATAACA-TTTTTTAATTAGCATTGCAACCA-TATTCACCTACCATATTTTTCC----CTCTCCTTTGCTTTCTGGGCCATTACTCACTTTCA---CAA---TTTGTATGTGACTCA---CTATTCTATACCTACTTTTCCTTTACCTTAAAATATTTTTT-A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13269858 317 - 40200012 GACAAATTTTTAT------A-----AAACCAGAAAAGTTCAATAGTC-TTTC-ATTCTCTGCTTTCACTAAC--------TTCTTTTAAGTATATTTCAACAATTATCTTAATATTGTCACCAGTAGATTAAGAGTACTGTTATAAACACTCTATTTCTATTTATTCAAAGCTTGAATTGAGCAAGCTGCTAATAACA-TTTTTTAATTAGCATTGCAACCA-TATTCACCTACCATATTTTTCC----CTCTCCTTTGCTTTCTGGGCCATTACTCACTTTCA---CAA---TTTGTATGTGACTCA---CTATTCTATACCTACTTTTCCTTTACCTTAAAATATTTTTT-A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3258572 317 + 7633303 GGCAAATTTTTAT------A-----AAACCAGAAAAGTTCAATAGTC-TTTC-ATTCTCTGCTTTCACTAAC--------TTCTTTTAAGTATATTTCAACAATTATCTTAATATTGTCACCAGTAGATTAAGAGTACTGTTATAAACACTCTATTTCTATTTATTCAAAGCTTGAATTGAGCAAGCTGCTAACAACA-TCTTTTAATTAGCATTGCAACCA-TATTCACCTACCATATTTTTCC----CTCTCCTTTGCTTTCTGGGCCATTACTCACTTTCA---CAA---TTTATATGTGACTCA---CTGTTCTATACCTACTTTTCCTTTACCTTAAAATATTTTTT-A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21960604 317 - 58131712 GGCAAATTTTTAT------A-----AAACCAGAAAAGTTCAATAGTC-TTTC-ATTCTCTGCTTTCACTAAC--------TTCTTTTAAGTATATTTCAACAATTATCTTAATATTGTCACCAGTAGATTAAGAGTACTGTTATAAACACTCTATTTCTATTTATTCAAAGCTTGAATTGAGCAAGCTGCTAATCACA-TTTTTTAATTAGCATTGCAACCA-TATTCACCTACCATATTTTTCC----CTCTCCTTTGCTTTCTGAGCCATTACTCACTTTCA---CAA---TTTGTATGTGACTCA---CTATTCTATACCTACTTTTCCTTTACCTTAAAAGATTTTTT-A i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 54682 317 + 2620224 GGCAAATTTTTAT------A-----AAACCAGAAAAGTTCAATAGTC-TTTC-ATTTTCTGCTTTCACTAAC--------TTCTTTTAAGTATATTTCAACAATTATCTTAATATTGTCACCAGTAGATTAAGAGTACTGTTATAAACACTCTATTTCTATTTATTCAAAGCTTGAATTGAGCAAGCTGCTAACAACA-TCTTTTAATCAGCATTGCAACCA-TATTCACCTACCATATTTTTCC----CTCTCCTTTGCTTTCTGGGCCATTACTCACTTTCA---CAA---TTTATATGTGACTCA---CTGTTCTGTACCTACTTTTCCTTTACTTTAAAATATTTTTT-A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2235555 317 + 10629787 GGCAAATTTTTAT------A-----AAACCAGAAAAGTTCAATAGTC-TTTC-ATTCTCTGCTTTCACTAAC--------TTCTTTTAAGTATATTTCAACAATTATCTTAATCTTGTCACCAGTAGATTAAGAGTACTGTTATAAACACTCCATTTCTATTTATTCAAAGCTTGAATTGAGCAAGCTGCTAATAACA-TTTTTTAATTAACATTGCAACCA-TATTCACCTACCATATTTTCCC----CTCTCCTTTGCTTTCTGGGCCATTACTCGCTTTCA---CAA---TTTGTATGTGACTCA---CTGTTCTATACCTACTTTTCCCTTATCTTAAAATATTTTTT-A i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24197299 327 + 132174527 GGAACATTTTTAC------AA-AGCAAACCATAAAAGTTCAATAGGC-TTTC-CTTCTCTGCTTTCACTAAC---TTCTTTTCTTTTAAGTATATATCAACAATTGTCTTAATATTGTCACCAGTAGATTGAGAGTACTGTTATAAACACTCTATTTCTATTTCTTCAAAGCTTGAATTGAGCTAGCTGCTAATAACA-TCATTCAAGTAGCATTGCAACTA-TATTCACCTACCATAATTTCCC----CTCTGCTTTGATTTCTGGGCCATTACTCACCTTCA---CAA---TTTGTATGTGACTCA---CAATTCTAAACCTTCTTTTCCCTTATCTTAAAATATTTTTTGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10599250 325 - 21366645 GGAACATTTTTAC------AA-AGCAAACCACAAAAGTTCAATAGTC-TTTC-CTTCTCTGCTTTCACTAAC---TTCTTTTCTTTTAAGTATATTTCAACAATTGTCTTAATATTGTCACTAGTAGATTAAGAGTATTGATATAAACACTC--TTTCTATTTCTTCAAAGCTTGAATTGAGCTAGCTGCTAATAACA-TTATTTAAGTAGAATTGCAACTA-TATTCACCAACCATAGTTTCCC----CTCTGCTTTGATTTCTGGGCCATTACTCACCTTCA---CAA---TTTGTCTGTGACTCA---CAATTCTAAACCTTCTTTTCCCTTATCTTAAAATATTTTTTGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3743425 327 - 13033340 GGAACATTTTTAC------AA-AGCAAACCATAAAAGTTCAATAGTC-TTTC-CTTCTCTGCTTTCACTAAC---TTCTTTTCTTTTAAGTATATTTCAACAATTGTCTTAATATTGTCACCAGTAGATTAAGAGTACTGTTATAAACACTCTATTTCTATTTCTTCAAAGCTTGAATTGAGCTAGCTGCTAATAACA-TTATTTAAGTAGCATTGTAACTA-TATTCACCAACCATATTTTCCC----CTCTGCTTTGATTTCTGGGCCATTACTCACCTTCA---CAA---TTTGTATGTGACTCA---CAATTCTAAACCTTCTTTTCCCTTATCTTAAAATATTttttga i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5235229 327 + 11604778 GGAACATTTTTAC------AA-AGCAAACCATAAAAGTTCAATAGTC-TTTC-CTTCTCTGCTTACACTAAC---TTATTTTCTTTTAAGTATATTTCAACAATTGTCTTAATATTGTCACCAGTAGATTAAGAGTACTGTTATAAACACTCTGTTTCTATTTCTTCAAAGCTTGAATTGAGCTAGCTGCTAATAACA-TTATTTAAGTAGCATTACAACTA-TATTCACCTACCATATTTTCCC----CTCTGCTTTGATTTCTGGGCCATTACTCACCTTCA---CAA---TTTGTATGTGACTCA---CAATTCTAAACCTTCTTTTCCCTTATCTTAAAATATTTTTTGA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 137429 317 + 36342412 GGAAAATTTTTATCAAAAAAA-AAAAAAACAGACAAGCTAAATTGTC-TCTT-ATTGTCTGCTTTTACTAAT---TTCCTTTCTTTTAACTATATGCCAACATTTGTCTTCATATTGTCATCTGTAGATTAAAAGTAGTGTTATAAACACTC---------------AAAGCTTAAATTGAGCTAGCTGCTAAAGGCA-GTATTTAATTGCCATTTTAACCA-TATTCCCTAACCTTATCTTCTA----TTCTTCCTGGATTTCTCGGTCATTGCTCACTTGAA---CAA---TTATTATATGATTTA---CAATCCCATATTTATTTTTGCCTTATCTTAAAATATATTTG-A i otoGar3.GL873530 I 121 C 0 s canFam3.chr30 13422677 315 + 40214260 TGAAGATTTTCAC------AAGGATGAAATAGACAATTTCATTTGTCTTTTC-ATTCTTTGCT----CTAAT---TTCTTCTTTTTAAATTATATTCTAACATTAGCCTTTGTATTGTCATCCATACATCAGATGTAGTGT------CACTGCTTTTCTGCCTCTCCC-------AACTGAGTGAGCTGCCAATCACG-TTATTTTATTAACACTCCAACCACTATTCACCCAGCTTATTTT-CC----TTCCAACTGGATTTCTGGGTCAATGTTCATGTTCAAATCAA---TTCATATATGACTCA---CAAATCCACATCTACCTTTGCCTGATCTTAAAATACTATTTGA i canFam3.chr30 C 0 I 117 s dasNov3.JH579377 1811629 342 - 2868945 TTAAAAATCGCGC------AAAAACAAACTGGTCAAGCTCAGTGGTC-TTTTAATTCTCTGCTTTCACTATCACTACTTTCTTTCTTAACTGTATTTCAACTTTTGCCTTTACATTGTCATCTGTTGACTGAAAATAATGTCATAAA-ACTATATAACCTCTTCTTCCAAGCTTGAATTGAGCTAGGTGCCAACCACA-TTATTTAAATAGCATTGTAGCCATTATTTCCAGACTTTATTTTTCCTTCTTTCTTCTTGGTTATCTGTGCCATTGTTCACTTTCA---CAACAGTCAGTATGTGACTCACACCAATTCTGTATATACTTTTGGTTTCTTTTAAAATACCATTTGA i dasNov3.JH579377 C 0 C 0 a score=592249.000000 s hg38.chrUn_KI270749v1 24379 56 + 158759 TTTAATAC----------------------------------------------------------------ATTTACATTTTT---TCTCCTTTTGCTTTTGGAATTGTCTTACTATCACGG s panTro5.chr1 101806777 56 - 228573443 TTTAATAC----------------------------------------------------------------ATTTACATTTTT---TCTCCTTTTGCTTTTGGGATTGTATTACTATCATGG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383937 56 + 99763055 TTTAATAC----------------------------------------------------------------ATTTACATTTTT---TCTCCTTTTGCTTTTGGAATTGTATTACTGTCGTGG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15396 56 - 24701 TTTAATAC----------------------------------------------------------------ATTTACATTTTT---TCTCCTTTTGCTTTTGGAATTGTATTACTATCACGT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514449 56 - 121039945 TTTAATAT----------------------------------------------------------------ATTTACATTTTT---TCTCCATTTGCTTTTGGAATTGTATTACTCTCATGG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421366 56 + 169600520 TTTAATAC----------------------------------------------------------------ATTTACATTTTT---TCTCCTTTTGCTTTTGGAATTGTATTACTGTCATGG i rheMac8.chr7 C 0 I 10 s macFas5.chr7 24025338 56 + 171882078 TTTAATAC----------------------------------------------------------------ATTTACATTTTT---TCTCCTTTTGCTTTTGGAATTGTATTACTGTCATGG i macFas5.chr7 C 0 I 10 s macNem1.NW_012010577v1 13270175 56 - 40200012 TTTAATAC----------------------------------------------------------------GTTTACATTTTT---TCTCCTTTTGCTTTTGGAATTGTATTACTGTCATGG i macNem1.NW_012010577v1 C 0 I 10 s cerAty1.NW_012000887v1 3258889 56 + 7633303 TTTAATAC----------------------------------------------------------------ATTTACATTTTT---TCTCCTTTTGCTTTTGGAATTGTATTACTGTCATGG i cerAty1.NW_012000887v1 C 0 I 10 s chlSab2.chr26 21960921 56 - 58131712 TTTAATAC----------------------------------------------------------------ATTTACATTTTT---TCTCCTTTTGCTTTTGGAATTGTATTACTGTCATGG i chlSab2.chr26 C 0 I 10 s manLeu1.NW_012108674v1 54999 56 + 2620224 TTTAATAC----------------------------------------------------------------ATTTACATTTTT---TCTCCTTTTGCTTTTGGAATTGTATTACTGTCATGG i manLeu1.NW_012108674v1 C 0 I 10 s colAng1.NW_012121598v1 2235872 56 + 10629787 TTTAATAC----------------------------------------------------------------ATTTATATTTTT---TCTCCTTTTGCTTTTGGAATTGTATTACTGTCATGG i colAng1.NW_012121598v1 C 0 I 3 s calJac3.chr10 24197626 55 + 132174527 TTTAACAC----------------------------------------------------------------ATTTACA-TTTT---TCTCCTTTTGCTTTTGGAATTGTATTTTTGTTATGA i calJac3.chr10 C 0 I 2 s saiBol1.JH378136 10599575 55 - 21366645 TTTAATAC----------------------------------------------------------------ATTTACA-TTTT---TCTCCTTTTGCTTTTGGAATTGTATTATTGTTATGG i saiBol1.JH378136 C 0 I 2 s cebCap1.NW_016107324v1 3743752 55 - 13033340 tttaatac----------------------------------------------------------------atttgca-tttt---tctccttttgcttttgcaattgcattACTGTTATGG i cebCap1.NW_016107324v1 C 0 I 2 s aotNan1.NW_018501505v1 5235556 55 + 11604778 TTTAATAC----------------------------------------------------------------ATTTACA-TTTT---TCTCCTTTTGCTTTTGGAATTGTATTACTGTTATGG i aotNan1.NW_018501505v1 C 0 I 2 s otoGar3.GL873530 137746 54 + 36342412 AAATATAC----------------------------------------------------------------ATCTATA-TTTT---TTTCCTTTTGCTTTCAGAGAAATATTAC-ATCATTT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13423109 123 + 40214260 tttaagactctcttgccctctcccaccacccaaataaataaatccttaaaattaaaaaaaaATACTATTTGAATTTATATGTCTACATTTTCATTTGCTTTTGGAAAAATTTAACTATCATTA i canFam3.chr30 I 117 C 0 s dasNov3.JH579377 1811971 56 - 2868945 GCTCACAC----------------------------------------------------------------CTTTACATTTAT---TTTCCTTTTAGTTTTAGAAAAATGGTACTTTCACTG i dasNov3.JH579377 C 0 C 0 a score=-9853.000000 s hg38.chrUn_KI270749v1 24435 4 + 158759 GGAG----- s panTro5.chr1 101806833 3 - 228573443 GG-G----- i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383993 4 + 99763055 GGGG----- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15452 4 - 24701 GGGG----- i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514505 3 - 121039945 GG-G----- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421432 4 + 169600520 GGAG----- i rheMac8.chr7 I 10 C 0 s macFas5.chr7 24025404 4 + 171882078 GGAG----- i macFas5.chr7 I 10 C 0 s macNem1.NW_012010577v1 13270241 4 - 40200012 GGAG----- i macNem1.NW_012010577v1 I 10 C 0 s cerAty1.NW_012000887v1 3258955 4 + 7633303 GGAG----- i cerAty1.NW_012000887v1 I 10 C 0 s papAnu3.chr7 21374540 4 + 162156779 GGAG----- i papAnu3.chr7 N 0 N 0 s chlSab2.chr26 21960987 4 - 58131712 GGAG----- i chlSab2.chr26 I 10 C 0 s manLeu1.NW_012108674v1 55065 4 + 2620224 GGAG----- i manLeu1.NW_012108674v1 I 10 C 0 s colAng1.NW_012121598v1 2235931 4 + 10629787 GGGG----- i colAng1.NW_012121598v1 I 3 C 0 s calJac3.chr10 24197683 2 + 132174527 GA------- i calJac3.chr10 I 2 C 0 s saiBol1.JH378136 10599632 2 - 21366645 GG------- i saiBol1.JH378136 I 2 C 0 s cebCap1.NW_016107324v1 3743809 2 - 13033340 GG------- i cebCap1.NW_016107324v1 I 2 C 0 s aotNan1.NW_018501505v1 5235613 2 + 11604778 GG------- i aotNan1.NW_018501505v1 I 2 C 0 s otoGar3.GL873530 137800 3 + 36342412 -GGG----- i otoGar3.GL873530 C 0 I 4 s canFam3.chr30 13423232 4 + 40214260 GGAT----- i canFam3.chr30 C 0 I 5 s dasNov3.JH579377 1812027 7 - 2868945 --AGGCTTG i dasNov3.JH579377 C 0 C 0 a score=305861.000000 s hg38.chrUn_KI270749v1 24439 26 + 158759 TT------TTCTTTTCCTTTTTCAAGAGTTTC s panTro5.chr1 101806836 26 - 228573443 TT------TTCTTTTCCTTTTTCAAGAGTTTC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44383997 26 + 99763055 TT------TTCTTTTCCTTTTTCAAGAGTTTC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15456 26 - 24701 TT------TTCTTTTCCTTTTTCAGGAGTTTC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514508 26 - 121039945 GT------TTCTTTTCCTTCTTCAAGAGTTTC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421436 24 + 169600520 --------TTCTTTTCCTTTTTCAAGAGTTTC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025408 24 + 171882078 --------TTCTTTTCCTTTTTCAAGAGTTTC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270245 24 - 40200012 --------TTCTTTTCCTTTTTCAAGAGTTTC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3258959 24 + 7633303 --------TTCTTTTCCTTTTTCAAGAGTTTC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21960991 24 - 58131712 --------TTCTTTTCCTTTTTCAAGAGTTTC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55069 24 + 2620224 --------TTCTTTTCCTTTTTCAAGAGTTTC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2235935 31 + 10629787 -TGTGGAGTTCTTTTCCTTTTTCAAGAGTGTC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24197685 26 + 132174527 TT------TTCTTTTCCTTTTTCAAGAGCTTC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10599634 26 - 21366645 TT------TTCTTTTCCTTTTTCAAGAGCTTC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3743811 26 - 13033340 CT------TTCTTTTCCTTTTTCAAGAGCTTC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5235615 26 + 11604778 TT------TTCTTTTCCTTTTTCAAGAGCTTC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 137807 26 + 36342412 ------TGTACTTTACCTTTTCTAAGAGTTTT i otoGar3.GL873530 I 4 I 355 s canFam3.chr30 13423241 26 + 40214260 TT------ATCTTATCCTTTCTCAAGAGTTGT i canFam3.chr30 I 5 C 0 s dasNov3.JH579377 1812034 26 - 2868945 TT------TTCCCTTTGTTTTCCAAAAGTTCC i dasNov3.JH579377 C 0 C 0 a score=128090.000000 s hg38.chrUn_KI270749v1 24465 11 + 158759 TCAAAATTCTT s panTro5.chr1 101806862 11 - 228573443 TCAAAATTCTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384023 11 + 99763055 TCAAAATTCTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15482 11 - 24701 TCAAAATTCTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514534 11 - 121039945 TCAAAATTCTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421460 11 + 169600520 TCACAATTCTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025432 11 + 171882078 TCACAATTCTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270269 11 - 40200012 TCACAATTCTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3258983 11 + 7633303 TCACAGTTCTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961015 11 - 58131712 TCACAATTCTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55093 11 + 2620224 TCACAATTCTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2235966 11 + 10629787 TCACAATTCCT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24197711 11 + 132174527 TCACAATTCTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10599660 11 - 21366645 TCACAATTCTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3743837 11 - 13033340 TCACAATTCTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5235641 11 + 11604778 TCACAATTCTT i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13423267 11 + 40214260 TCAAAATATtt i canFam3.chr30 C 0 I 236 s dasNov3.JH579377 1812060 11 - 2868945 TCACTATTCTT i dasNov3.JH579377 C 0 C 0 e otoGar3.GL873530 137833 355 + 36342412 I a score=358519.000000 s hg38.chrUn_KI270749v1 24476 35 + 158759 GACCAAAGCCCTATCCCCTGAAGTGAGTAATA---TTC s panTro5.chr1 101806873 35 - 228573443 GACCAAAGCCCTATCCCCTGAAGTGAGTAATA---GTC i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384034 35 + 99763055 GACCTAAGCCCTATCCTCTGAAGTGAGTAATA---TTC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15493 35 - 24701 GACCAAAGCCCTATCCCCTGAAGTGAGTAATA---TTC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514545 35 - 121039945 GACCAAAGCCCTATCCCCTGAAGTGAGTAATA---TTC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421471 35 + 169600520 GACCAAAGCCCTATCCCCTGAAGTGAGTAATA---GTC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025443 35 + 171882078 GACCAAAGCCCTATCCCCTGAAGTGAGTAATA---GTC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270280 35 - 40200012 GACCAAAGCCCTATCCCCTGAAGTGAGTAATA---GTC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3258994 35 + 7633303 GACCAAAGCCCTATCCCCTGAAGTGAGTAATA---GTC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961026 35 - 58131712 GACCAAAGCCCTATCCCCTGAAATGAGTAATA---GTC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55104 35 + 2620224 GACCAAAGCCCTATCCCCTGAAGTGAGTAATA---GTC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2235977 35 + 10629787 GACCAAAGCCCTATCCCCTGAAGTGAGTAATA---GTC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24197722 32 + 132174527 GACCAAAGCCCTATCCCCTGAAGTGAGTAACA------ i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10599671 32 - 21366645 GACCAAAGCCCTATCCCCTGAAGTGAGTAACA------ i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3743848 35 - 13033340 GACCAAAGCCCTATCCCCTGAAGTGAGTAACATTC--- i cebCap1.NW_016107324v1 C 0 I 76 s aotNan1.NW_018501505v1 5235652 32 + 11604778 GACCAAAGCCTTATCCCCTGAAGTGAGTAACA------ i aotNan1.NW_018501505v1 C 0 C 0 s dasNov3.JH579377 1812071 34 - 2868945 GACCAAAGCCCTGTCCCA-GAAATGAGTAAAG---ATC i dasNov3.JH579377 C 0 C 0 e otoGar3.GL873530 137833 355 + 36342412 I e canFam3.chr30 13423278 236 + 40214260 I a score=669955.000000 s hg38.chrUn_KI270749v1 24511 78 + 158759 TTCACTATATTACCGCA-----------TCACATGTTTACATCAGGCTAAAGTAAGAAACACTACTCGTGTTCTGTAGCtaattgataa s panTro5.chr1 101806908 78 - 228573443 TTCACTATATTACCGCA-----------TCACATGTTTACAGCTGGCTAAAGTAAGAAACACTGCTCGTGTTCCATAGCTAATTGATAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384069 78 + 99763055 TTCACTAAATTACTGCA-----------TCACATGTTTACATCTGGCTAAAGTAAGAAACACTAATCGTATTCTGTAGCTAATCAATAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15528 78 - 24701 TTCACTATATTACCGCA-----------TCACATGTTTACATCTGGCTAAAGTAAGAAACACTACTCGTGTTCTGCAGCtaattgataa i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514580 78 - 121039945 TTCACTAAATTACTGCA-----------TTACATGTTTACATCTGGCTAAAGTAGGAAACACTAATCATATTCTGTAGCTAATCGATAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421506 78 + 169600520 TTCACTGAATTACTGCG-----------TCACATTTTTACATCTGGCTAAAATAGTAAACACTAATCATGTTCTGTAGCTAATTGATAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025478 78 + 171882078 TTCACTGAATTACTGCG-----------TCACATTTTTACATCTGGCTAAAATAGTAAACACTAATCATGTTCTGTAGCTAATTGATAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270315 78 - 40200012 TTCACTGAATTACTGCG-----------TCACATTTTTACATCTGGCTAAAATAGTAAACACTAATCATGTTCTGTAGCTAATTGATAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3259029 78 + 7633303 TTCACTGAATTACTGCG-----------TCACATTTTTACATCTGGCTAAAATAGTAAACACTGATCGTGTTCTGTAGCTAATTGATAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961061 78 - 58131712 TTCACTGAATTACTGCG-----------TCACATTTTTACATCTGGCTAAAATAGTAAACGCTAATCGTGTTCTGTAGCTAATTGATAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55139 78 + 2620224 TTCACTGAATTACTGCG-----------TCACATTTTTACATCTGGCTAAAATAGCAAACACTGATCGTGTTCTGTAGCTAATTGATAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2236012 78 + 10629787 TTCACTGAATTACTGCG-----------TCACATTTTTACATCTGGCTAAAATAGTAAACACTAATCGTGTTCTGTAGCTAATCGATCA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24197754 78 + 132174527 TTCACTAAATTACTGGA-----------TCACATTTTTTCATCTGGCTAAAGTAGGAAACACTAATAGTGTTCTTTAGCTGGTCGTTAA i calJac3.chr10 C 0 I 1446 s saiBol1.JH378136 10599703 78 - 21366645 TTCACTAAATAACTGGA-----------TCACATTTTTTGATCTGGCTAAAGTAGGAAACACTAATAGTGTTCTTTAGCTAATCGATAA i saiBol1.JH378136 C 0 I 1427 s aotNan1.NW_018501505v1 5235684 78 + 11604778 TTCACTAAATTACTGGA-----------TCACATTTTTTCATCTGGCTAAAGTAGGAAACACTAATAGTGTTCTTTAGCTAATCGATAA i aotNan1.NW_018501505v1 C 0 C 0 s dasNov3.JH579377 1812105 89 - 2868945 TTCCCTAAATTACTGCATTTAAATCCTGTCATGTTTTCTCATCTGGTTTCAATAGGAAATACTAATAGTATTCCTTGGCTAATCAATAA i dasNov3.JH579377 C 0 C 0 e otoGar3.GL873530 137833 355 + 36342412 I e cebCap1.NW_016107324v1 3743883 76 - 13033340 I e canFam3.chr30 13423278 236 + 40214260 I a score=33732.000000 s hg38.chrUn_KI270749v1 24589 5 + 158759 ttgtt s panTro5.chr1 101806986 5 - 228573443 TTGTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384147 5 + 99763055 TTGTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15606 5 - 24701 ttgtt i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514658 5 - 121039945 TTGTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421584 5 + 169600520 TTGTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025556 5 + 171882078 TTGTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270393 5 - 40200012 TTGTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3259107 5 + 7633303 TTGTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961139 5 - 58131712 TTGTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55217 5 + 2620224 TTGTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2236090 5 + 10629787 TTGTT i colAng1.NW_012121598v1 C 0 C 0 s dasNov3.JH579377 1812194 5 - 2868945 GTGTT i dasNov3.JH579377 C 0 C 0 e otoGar3.GL873530 137833 355 + 36342412 I e aotNan1.NW_018501505v1 5235762 0 + 11604778 C e cebCap1.NW_016107324v1 3743883 76 - 13033340 I e canFam3.chr30 13423278 236 + 40214260 I e saiBol1.JH378136 10599781 1427 - 21366645 I e calJac3.chr10 24197832 1446 + 132174527 I a score=77558.000000 s hg38.chrUn_KI270749v1 24594 17 + 158759 aaaataaac--aacaat---tg s panTro5.chr1 101806991 19 - 228573443 AAAATAAACTTAACAAT---TG i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384152 22 + 99763055 AAGATAAATTTAACAATTTATT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15611 19 - 24701 aaaataaacttaacaat---tg i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514663 22 - 121039945 AAGATAAATTTAAAAATTTATT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421589 19 + 169600520 AAAATAAATATAACAAT---TT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025561 19 + 171882078 AAAATAAATATAACAAT---TT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270398 19 - 40200012 AAAATAAATATAACAAT---TT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3259112 19 + 7633303 AAAATAAATATAACAAT---TT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961144 19 - 58131712 AAAATAAATATAACAAT---TC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55222 19 + 2620224 AAAATAAATATAACAAT---TT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2236095 19 + 10629787 AAAATAAATATAACAAT---TT i colAng1.NW_012121598v1 C 0 C 0 e otoGar3.GL873530 137833 355 + 36342412 I e aotNan1.NW_018501505v1 5235762 0 + 11604778 C e cebCap1.NW_016107324v1 3743883 76 - 13033340 I e canFam3.chr30 13423278 236 + 40214260 I e dasNov3.JH579377 1812199 0 - 2868945 C e saiBol1.JH378136 10599781 1427 - 21366645 I e calJac3.chr10 24197832 1446 + 132174527 I a score=70464.000000 s hg38.chrUn_KI270749v1 24611 15 + 158759 at---aacaaattataga s panTro5.chr1 101807010 15 - 228573443 AT---AACAAATTATAGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384174 15 + 99763055 AT---AATAAATTATAGA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15630 15 - 24701 at---aaCAAATTAGAGA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514685 15 - 121039945 AT---AATAAATTATAGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421608 13 + 169600520 AT-----TAAATTATAGA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025580 13 + 171882078 AT-----TAAATTATAGA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270417 13 - 40200012 AT-----TAAATTATAGA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3259131 13 + 7633303 AT-----TAAATTATAGA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961163 13 - 58131712 AT-----TAAATTATAGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55241 13 + 2620224 AT-----TAAATTATAGA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2236114 18 + 10629787 ATTATAATAAATTATAGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24199278 15 + 132174527 at---aataaattCCAGA i calJac3.chr10 I 1446 C 0 s saiBol1.JH378136 10601208 15 - 21366645 at---aataaattCCATA i saiBol1.JH378136 I 1427 C 0 e otoGar3.GL873530 137833 355 + 36342412 I e aotNan1.NW_018501505v1 5235762 0 + 11604778 C e cebCap1.NW_016107324v1 3743883 76 - 13033340 I e canFam3.chr30 13423278 236 + 40214260 I e dasNov3.JH579377 1812199 0 - 2868945 C a score=91888.000000 s hg38.chrUn_KI270749v1 24626 12 + 158759 aaatgattattT- s panTro5.chr1 101807025 12 - 228573443 AAATGATTATTT- i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384189 12 + 99763055 AAATGATCATTT- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15645 12 - 24701 AAATGATTATTT- i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514700 12 - 121039945 AAATGATCATTT- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421621 12 + 169600520 AAATGATCATTT- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025593 12 + 171882078 AAATGATCATTT- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270430 12 - 40200012 AAATGATCATTT- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3259144 12 + 7633303 AAATGATCATTT- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961176 12 - 58131712 AAATGGTCATTT- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55254 12 + 2620224 AAATGATCATTT- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2236132 12 + 10629787 AAATGATCATTT- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24199293 12 + 132174527 AAATGATCATTT- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10601223 12 - 21366645 AAATAATCATTT- i saiBol1.JH378136 C 0 C 0 s canFam3.chr30 13423514 13 + 40214260 AAATGACTGGATT i canFam3.chr30 I 236 C 0 e otoGar3.GL873530 137833 355 + 36342412 I e aotNan1.NW_018501505v1 5235762 0 + 11604778 C e cebCap1.NW_016107324v1 3743883 76 - 13033340 I e dasNov3.JH579377 1812199 0 - 2868945 C a score=396510.000000 s hg38.chrUn_KI270749v1 24638 55 + 158759 TAAGGT----TCT------------------------TTATACT------TGTAATCTTTGTAAATAATATGAGTTATCACCTCTTTCT s panTro5.chr1 101807037 55 - 228573443 TAAGGT----TCT------------------------TTTTACT------TCTAATATTTGTAAATAATATGAGTCATCACCTCTTTCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384201 55 + 99763055 TTAGGT----TCC------------------------TTATACT------TGTAATATTTGTAAATAATATGAGTTATCACCTCTTTCT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15657 55 - 24701 TAATGT----TCT------------------------TTATACT------TGTAGTATTTGTAAATAATATGAGTTATCACCTCTTTCT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514712 55 - 121039945 TTAGGT----TCC------------------------TTATACT------TGTAATATTTGTAAATAATATGAGTTATCACCTCTTTCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421633 55 + 169600520 TAAGAT----TCC------------------------TTATACT------TGTAATATTTGTAAATAATATGGGTTATCACCTCTTTCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025605 55 + 171882078 TAAGAT----TCC------------------------TTATACT------TGTAATATTTGTAAATAATATGGGTTATCACCTCTTTCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270442 55 - 40200012 TAAGAT----TCC------------------------TTATACT------TGTAATATTTGTAAATAATATGGGTTATCACCTCTTTCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3259156 55 + 7633303 TAAGAT----TCC------------------------TTATGCT------TGTAATATTTGTAAATAATATGGGTTATCACCTCTTTCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961188 55 - 58131712 TAAGAT----TCC------------------------TTATACT------TGTAATATTTGTAAATAATATGGGTTATCACCTCTTTCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55266 55 + 2620224 TAAGAT----TCC------------------------TTATACT------TGTAATATTTGTAAATAATATGGGTTATCACCTCTTTCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2236144 55 + 10629787 TAAGGT----TCC------------------------TTATACT------TGTAATATTTGTAAATAATATGAGTTATCACCTCTTTCT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24199305 55 + 132174527 TAAGGT----TCC------------------------TTATACT------TGTAACATTTATAAATAATATGAATTATCACCTCTTTCT i calJac3.chr10 C 0 T 1526 s saiBol1.JH378136 10601235 55 - 21366645 CAAGGT----TCC------------------------TTATACT------TATAATATTTGTAAATAATATGAGTTATCACCTCTTTCT i saiBol1.JH378136 C 0 T 1508 s otoGar3.GL873530 138188 79 + 36342412 TAAAGT----TCTTCACTAAAAACTGCATTTAGTGCATTATATTATCTAATGTAGCATCAATAGAATATAC---TCATAGTGTTTT--- i otoGar3.GL873530 I 355 C 0 s canFam3.chr30 13423527 55 + 40214260 TAATGTATCATTT------------------------TTTCTCA------TCTGGTTTCAATAAGAAGCACTAATAATATCCCTT---- i canFam3.chr30 C 0 C 0 e aotNan1.NW_018501505v1 5235762 0 + 11604778 C e cebCap1.NW_016107324v1 3743883 76 - 13033340 I e dasNov3.JH579377 1812199 0 - 2868945 C a score=64816.000000 s hg38.chrUn_KI270749v1 24693 10 + 158759 GTAGCT--AATT s panTro5.chr1 101807092 10 - 228573443 GTAGCT--AATT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384256 10 + 99763055 GTAGCT--AATT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15712 10 - 24701 GTAGCT--AATT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514767 10 - 121039945 ATAGCT--AATT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421688 10 + 169600520 GTAGCT--AATC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025660 10 + 171882078 GTAGCT--AATC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270497 10 - 40200012 GTAGCT--AATC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3259211 10 + 7633303 GTAGCT--AATC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961243 10 - 58131712 GTAGCT--AATC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55321 10 + 2620224 GTAGCT--AATC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2236199 10 + 10629787 GTAGCT--AATC i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 138267 12 + 36342412 TTAGCTACAGTT i otoGar3.GL873530 C 0 I 2 s canFam3.chr30 13423582 8 + 40214260 --AGCT--AATC i canFam3.chr30 C 0 I 5 e aotNan1.NW_018501505v1 5235762 0 + 11604778 C e cebCap1.NW_016107324v1 3743883 76 - 13033340 I e dasNov3.JH579377 1812199 0 - 2868945 C e saiBol1.JH378136 10601290 1508 - 21366645 T e calJac3.chr10 24199360 1526 + 132174527 T a score=12000.000000 s hg38.chrUn_KI270749v1 24703 1 + 158759 G s panTro5.chr1 101807102 1 - 228573443 G i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384266 1 + 99763055 G i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15722 1 - 24701 G i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514777 1 - 121039945 G i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421698 1 + 169600520 G i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025670 1 + 171882078 G i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270507 1 - 40200012 G i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3259221 1 + 7633303 G i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961253 1 - 58131712 G i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55331 1 + 2620224 G i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2236209 1 + 10629787 G i colAng1.NW_012121598v1 C 0 C 0 s cebCap1.NW_016107324v1 3743959 1 - 13033340 G i cebCap1.NW_016107324v1 I 76 C 0 s aotNan1.NW_018501505v1 5235762 1 + 11604778 G i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 138281 1 + 36342412 G i otoGar3.GL873530 I 2 C 0 s canFam3.chr30 13423595 1 + 40214260 G i canFam3.chr30 I 5 C 0 e dasNov3.JH579377 1812199 0 - 2868945 C e saiBol1.JH378136 10601290 1508 - 21366645 T e calJac3.chr10 24199360 1526 + 132174527 T a score=12376.000000 s hg38.chrUn_KI270749v1 24704 1 + 158759 T s panTro5.chr1 101807103 1 - 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384267 1 + 99763055 T i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15723 1 - 24701 T i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514778 1 - 121039945 T i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421699 1 + 169600520 T i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025671 1 + 171882078 T i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270508 1 - 40200012 T i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3259222 1 + 7633303 T i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961254 1 - 58131712 T i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55332 1 + 2620224 T i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2236210 1 + 10629787 T i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10599782 1 - 21366645 T i saiBol1.JH378136 T 1508 C 0 s cebCap1.NW_016107324v1 3743960 1 - 13033340 T i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5235763 1 + 11604778 T i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 138282 1 + 36342412 T i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13423596 1 + 40214260 T i canFam3.chr30 C 0 C 0 e dasNov3.JH579377 1812199 0 - 2868945 C e calJac3.chr10 24199360 1526 + 132174527 T a score=36210.000000 s hg38.chrUn_KI270749v1 24705 3 + 158759 ATA s panTro5.chr1 101807104 3 - 228573443 ATA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384268 3 + 99763055 ATA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15724 3 - 24701 ATA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514779 3 - 121039945 ATA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421700 3 + 169600520 ATA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025672 3 + 171882078 ATA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270509 3 - 40200012 ATA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3259223 3 + 7633303 ATA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961255 3 - 58131712 ATA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55333 3 + 2620224 ATA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2236211 3 + 10629787 ATA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24197834 3 + 132174527 ATA i calJac3.chr10 T 1526 C 0 s saiBol1.JH378136 10599783 3 - 21366645 ATA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3743961 3 - 13033340 ATA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5235764 3 + 11604778 ATA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 138283 3 + 36342412 GTA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13423597 3 + 40214260 AGA i canFam3.chr30 C 0 C 0 e dasNov3.JH579377 1812199 0 - 2868945 C a score=15571486.000000 s hg38.chrUn_KI270749v1 24708 1271 + 158759 GGGAGCACACCCAGTTAGTGGCA----------------TATTTCTTAACACATTTC--TGATATCAAGAATAACAAATACAATGCAGTGGGGAGTGGAgaaaagaaattaagtgtggctacatctgcaagtaacaattgcagccactttgtcaagggttaaacaatcgtcaatgagctatacacattgtttgtcaccagaataactgaatcaagaggttccaactcattg-----tttcattcccatatacctgaacatctgggacatgaagaaatagtgtgtat----------gtgttaataggcaaagctgtag--------taatgacttctacatattggaaGCAGTTATCTATTTTCCTGTTACTATCTAATTTTTACACA----------------------AAAATACCTCAGATGAATATTGACAGAAACTCAGAAAGAAGTATGGCATA----AACTAATATGAAGGTAACGTAGTAATGGCAGAAAG-TTACAGCTTAAAAGTTTTTACAGTGGGAAGACTATTGTAATAGTGAGAGCCATGTATAAG-TTTGTTTTGAAATGATAATGTACAGCT-AAAGAGTATAATG--CTCGA-ATTTTTGTATATGAAGTTTTCGTAATTCAACAAGTAGGGTTAAGAGACAATAAGAATTACACAGAATGTTGGATTTTATTTCACGTCTGTTCCTCTTGTCAGACATTGCCATCTTTCCCCTGTTTCGTCAGGTCTTCAGTAAGTTAACAACATTCACTCTGTGAAAAGTACCACATGATTTATTGTATAAATATAATTGGAAATACAC-TGTGGTTCCTCATATCCTCAAGCTTATAATTCAGTTTGGAGACTACACTATATAAATGTAGAAATGCCATAATTATGCTTATAAATTGATTTTTTAAAACATGCAAATTAATTTGGTAGAAACTGAATACATAAGTACGGGGGTGCCATATAAAATAATGATCAATGCCAGTGGGATTAATCAAAGAAAGTTTCTTG-GGGAAGTGAATTCTAAACAGAATTTGGTATATTTGTTTATTTAGCACTCA-TTTTATGTTTTCTAATTATAAATATAACGTATTCTCATATTCTCAAGGTAATAAATTTGCAAATTTTAAA-TTAGTAGGAAGAGTAAAAGGAACTAAGATCCCACTGTCCAAAGGTAATCATTAT-TCAGGTTCTGTTCTTTTCCTTCCATTTGGTTCTCTGATATTTTCTTCATGGTTGCCATTACATCACATATTCAATATTATGACCCAGTTTATGTTTCAGTCAGTGTCTATACATACA-ACTTTGAATGATACAAATGTCTCATAGAAACTAAGTTT s panTro5.chr1 101807107 1274 - 228573443 GGGAGCACATGCAGTTAGTGGCA----------------AGTTTCTTAACACATTTC--TCATATCAAGAATAACAAATACAATGCAGTGAGGAGTGGAgaaaagaaattaagcgtggctacatctgcaagtaacaattgcagctgctttgtcgagggtaaaacaatcgtcaatgagctatacaggttgtttgtcaccagaataactgaatcaagaggctccaactcatta-tttttttcattcccatatacctgaacatctgggacatgaagaaatagtgtgtat----------gtgttaataggcaaagctgtag--------taatgacttctacctattagaaGCAGTTATCTATTTTCCTGTTACTATCTAATTTTTACACA----------------------AAAATACTTCAGATGAATATTGGCAGAAACTCAGAAAGAAGTACTGCATA----AACTAATATGAAGGTAATATAGTAATGGCAGAAAG-TTACAGCTTAAAAGTTTTTACAGGGGGAAGATTATTGTAATAGTGAGAGCCACGTATAAG-TTTGTTTTGAAATGATAATGTACAGCT-AAAGAGTATAATG--CTCAA-ATTTTTGTATACGTAGTTTTTGTAATTCAACAAGTAGGGTTAAGAGACAATAAGAATTATACAGAATGTTGGATTTTATTTCACATCTGTTCCTCTTGTCAGATATGGCCATCTTTCCCATGTTTCATCAGGTGTTCAGTAAGTTAACAACATTCACTCTGTGAAAAGTACCACATGACTTATTGCATAAATATAGTTGGAAATACAC-TGtggttcctcatatcctcaagcttataattcagtttggagactacactatataaatgtagaaatgccataattttgcttataaattgactttttaaaacatgcaaattaatatggtagaaactgaatacataagtatgggggtgccatatgaaataatgatcaatgccagt-ggattaatcaaggaaagtttcttg-gggaagtgAATTCTAAACAGAATTTGGTATATTTGTTTATTTAGCACTCA-TTTTATATTTTTAAATCATAAATATAATGTATCCTCATATTCTCAAGGTAATAAATTTGCAAATTTTAAA-TTAGTAGGAAGAGTAAAAGGAACTAAGATGCCACTGTCCAAAGGTAATCTTTAT-TCAGGTTCTGCTCTTTTCCTTCTATTTTGTTCTCTGATATTTTCTTCATCATTGCCATTATATCACATATTCAATATTATAACCCACTTTGTGTTTCAGTCAGTGTCTAGCCATACA-ACTTTGAATGATACAAATGTCTCATAGAAACTAAGTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44384271 1278 + 99763055 GGGAGCACATGCAGTTAGTGGCA----------------TGTTTCTTAACACATTTC--TCGTATCAAGAATAACAAATACAATGCAGTGGGGAGTGGAGAAAAG-AATTAAGTGTGGCTACATCTGCAAGTAACAATTGCAGccactttgtcaagggtaaaacaatcatcaatgagctatacagattgtttt---acagaataactgaatcaagaggttccaactcattaatttttttcattcccatatgcctgaacatctgggacatgaagaaatagtgcgtat----------gtgttaataggcaaagctatag--------taatgacttctacctattagaaGCAGTTATCTATTTTCCTGTTACTATCTAATTTTTACACA----------------------AAAATAATTCAGATGAATATTGACAGAAACTCAGAAAGAAATATGGCATAAACTAACTAATATAAAGGTAATGTAGTAATGGCAGAAAG-TTAGAGCTTAAAAGTTTTTACAATGGGAAGATTATTGTGATAATGGGAGCCATGTATAAG-TTTGTTTTGAAATGATAATGTACAGCTAAAAGAGTATAATG--CTCAA-ATTTTTGTATATGTAGTTTTCATAATTCAACAAGTAGGGTTAAGAGACAATAAGAATTATACAGAATGTTGGATTTTATTTCATGTCTGTTCCTCTTGTCAGACATTGCCATCTTTCCCATGTTCCATCAGGTGTTCAGTATGTTAACAACATTCACTCTGTGAAAATTACCACATGATTTATTGTATAAATATAGTTGGAAATACAC-TGtggttcctcatatcctgaagcttataattcagtttggagactacactcaataaatgtagaaatgccataattatgcttataaattgactttttaaaacatgcaaattaatatggtagaaactgaatacgtaagtatgggggtgccacataaagtaatgatcaatgccagtgggattaatcaaggcaagtttcttg-gggaagtgAATTCTAAACAGAATTTGATATATTTGTTTATTTAGCATTCA-TTTTATGTTTTCTAATTATAAATATAATGTATTCTCATATTCTCAAGGTAATAAATTTGCAAATCTTAAA-TTAGTAGGAAGATTAAAAGGAACTAAGATCCCACTGTCCACAGGTAATCATTAT-TCAGGTTCTGCTCTTTTCCTTCCATTTGATTCTCTGATATTTTCTTCATGGGTGCCATTATATCACATATTCAGTATTATAACCCACTTTGTGTTTCAGTCAGTGTCTATACATACAGACTTTGAATGATACAAATGTCTCATAGAAACTAAGTTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 15727 1265 - 24701 GGGAGCACACCCAGTTAGTGGCA----------------TGTTTCTTAACACAT-------ATATCAAGAATAACAAATCCAATGCAGTGGGGAGTGGAGAAAGA-AATTAAATGTGGCTACATCTGCAAGTAACAATTGCAGccactttgtcaagggtaaaacaatcgtccatgagctatacacattgtttgtcaccagaataactgaatcaagcggttccaactcattaatttgtttcattcccatgtgcctgaacatctgggacatgaagaaatagtgtgtat----------gtgttaataggcaaagctgtag--------taatgacttctacctattggaagcagttatctgttttcctgttactatcTAATTTTTACACA----------------------AAAATACTTCAGATGAATATTGACAGAAACTCAGAAAGAAGCATGGCATA----AATTAATATGAAGGTAATGTAGTAATGGCAGAAAG-TTACAGCTTAAAAGTTTTTACGGTGAGAAGATTATTGTAATAGTGAGAGCCAGGTATAAG-TTT-TTTTGAAATGATAATGTACAGCT-AAAGACTATAATG--CTCGA-ATTTTTGTATATGTAGTTTTCGTAATTCAACAAGTAGGGTTAAGAGACAATAAGAATTACACAGAATGCTGGATTTTATTTCACGTCTGTTCCTCTTGTCAGACATTGCCATCTTTCCCATGTTTCGTCAGGTCTTCAGTAAGTTAACAACATTCACTCTGTGAAAAGTACCACATGATTTATTGTATAAATATAGTTGGAAATACAC-TGtggttcctcatatcctcaagcttataattcagtttggagactacactatataaatgtagaaatgccataattatgcttataaattgattttttaaaacatgcaaattaatttggtagaaactgaatacataagtatgggggtgccatataaaatgatgatcaatgccagtgggattaatcaaggaaagtttcctg-gggaagtgAATTCTAAACAGAATTTGGTATA----TTTATTTAGCACTCA-TTTTATGTTTTCTAATTATAAATATAACATATTCTCATATTCTCAAGGTAATAAATTTGCAAATTTTAAA-TTCGTAGGAAGAGTAAAAGGAACTAAGATCCCACTGTCCAAAGGTAATCATTAT-TCAGGTTCTGCTCTTTTCCTTCCATTTGGCTGTCTGATATTTTCTTCATGGTTGCCATTACATCACATATTCAGTATTATGACCCACTTTGTGTTTCAGTCAGTGTCTATACATACA-ACTTTGAATGATACAAATGTCTCATAGAAACTAAGTTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67514782 1275 - 121039945 GGGAGCACATGCAGTTAGTGGCA----------------TGTTTCTTAACACATTTC--TCGTATCAAGAATAACAAATACAATGCACTGGGGAGTGGAGAAAAG-AATTAAGTGTGGTTACATCTGCAAGTAACAATTGCAGCCACTTTATCAAGGGTAAAAGAATCATCAATGAGCTATACAGATTGTTTGTCACCAGAATAACTGAATCAAGAGGTTCCAACTCATTAATTTTTTTCATTCCCATATGCCTGAACATCTGGGACATGAAGAAATAGTGTGTAT----------GTGTTAATAGGCAAAGCTGTAG--------TAATGACTTCTACCTATTAGAAGCAGTTATCTATTTTCCTGTTACTATCTAATTTTTACACA----------------------AAAATACTTCAGATGAATATTGACAGAAACTCAGAAAGAAATATGGCATA----AACTAATATAAACGTAATGCAGTAATGGCAGAAAG-TTAGAGCTTAAAAGTTTTTACAATGGGAAGATTATTGTAATAATGGGAGCCATGTGTAAG-TTTGTTTTGAAATGATAATGTACAGCTAAAAGAGTATAATG--CTCAA-ATTTTTGTATATGTAGTTTTTGTAATTCAACAAGTAGGGTTAAGAGACAATAAGAATTATACAGAATGTTGGATTTTATTTCATGTCTGTTCCTCTTGTCAGACATTGCCATCTTTCCCATGTTTCATCAAGTGTTCAGTAAGTTAACAACATTCACTCTGTGAAAATTACCACAT--TTTATTGTATAAATATAGCTGGAAATACAC-TTTGGTTCCTCATATCCTGAAGCTTATAATTCAGTTTGGAGACTACACTATATAAATGTAGAAATGCCATAATTATGCTTATAAATTGACTTTTTAAAACATGCAAATTAATATGGTAGAAACTGAATACATAAGTATGGGGGTGCCATATAAAGTAATGATCAATGCCAGTGGGATTAATCAAGGCAAGTTTCTTG-GGGAAGTGAATTCTAAGCAGAATTTGATATATTTGTTTATTTAGCACTCA-TTTTATATTTTCTAATTATAAATATAATGTATTCTCATATTCTCAAGGTAATAAATTTGCAAATTTTAAA-TTAGTAGGAAGAGTAAAAGGAACTAAGATCCCACTGTCCAAAGGTAATCATTAT-TCAGGTTCTGCTCTTTTCCTTCCATTTGGTTCTCTGATATTTTCTTCATGGTTACCATTATATCACATATTCAATATTATAATCCACTTTGTGTTTCAGTTAGTGTCTATACATACAGACTTTGAATGATACAAATGTCTCACAGAAACTAAGTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23421703 1286 + 169600520 GGGAGCACTTGTAGTTAGTGGCA----------------TGTTTCTTAACACATTTC--TCGTATCAAGAATAACAAATACAATTCAGTGGGGAGTGGAGAAAAGAAATTAAGTGTGGCTGCACCGGCGAGTAACAATTGCAGccactttgtcaaagataaaacaatcatcaatgagctatacagattgtttgtcaccagaataactgaatcaagaggttccagctcattaatttttttcattcccatatgcctgaacatctggaacatgaagaactagtgtgtat----------gtattaataggcaaAGCTGTAG--------TAATAACTTCTA-----------CAGTTATCTATTTTCCTATTACTATCTAATTTTTACACAAAAATTATCTAATTTTTACAAGAAAATACTTCAGATGAATATTGACAGAAACTCAGAAAGAAGTAGGGCATA----AACTAATACAAAGGTAAAGTAGTAGTGGCAGAAAG-TTAGATCTTAAAAGTTTTTACAATGGGAGCATTATTGTAATAATGGGAGCCATGTATAAG-TTTGTTTTGAAATGATAATGTACAGCTAAACGAGTATAATG--CTCAA-ATTTTTGTATGTATAGTTTTTGTAATTCAACAAGTAGGGTTAAGAGGCAATAAGAATTATACACAATGTTGGATTTTATTTCATGTCTGTTCCTCTTGTCAGACATTGCCATCTTTCCCATGTTTCATCAGGTGTTCAGTAAGTTAACAACATTCACTC--TGAAAAGTACCACATGATTTATTGTATAAATAGAGTTGGAAATACAC-TGtggttcctcatatccgcaagcttataattcagtttggagactacattatataaatgtagaaatgccataattatgcttataaattgactttttaaaacatgcaaattactatggtagaaactgaatacataagtatgggggtgccatataaagtaatgatcaatgccagcaggtttaatcaaggaaagtttcttg-gggaagtgAATTCTAAACAGAATTTGATATATTTGTTTCTTTAGCACTCA-TTTTATGTTTTCTAATTATAAATATAATGTATTCTCATATTCTCAAGGTAATAAATTTGCAAATTTTAAA-TTAGTAGGAAGAGTAAGAGGAACTAAGATCCCACTGTCCAAAGGTAATCATTAT-TCAGGTCCTGCTCTTTTCCTTCCATCTGGTTCTCTGATATTTTCTTCACGGTTGGCGTTATATCACATATTCAATATTGTAACCCACTTTGTGTTTCAGTCAGTGTCTATACATACA-ACTTTGAATGACACAAATGTCTCATAGAAACTAAGTTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24025675 1286 + 171882078 GGGAGCACTTGTAGTTAGTGGCA----------------TGTTTCTTAACACATTTC--TCGTATCAAGAATAACAAATACAATTCAGTGGGGAGTGGAGAAAAGAAATTAAGTGTGGCTGCACCGGCGAGTAACAATTGCAGccactttgtcaaggataaaacaatcatcaatgagctatacagattgtttgttaccaaaataactgaatcaagaggttccagctcattaatttttttcattcccatatgcctgaacatctggaacatgaagaactagtgtgtat----------gtattaataggcaaAGCTGTAG--------TAATAACTTCTA-----------CAGTTATCTATTTTCCTATTACTATCTAATTTTTACACAAAAATTATCTAATTTTTACAAGAAAATACTTCAGATGAATATTGACAGAAACTCAGAAAGAAGTATGGCATA----AACTAATACAAAGGTAAAGTAGTAGTGGCAGAAAG-TTAGATCTTAAAAGTTTTTACAATGGGAGCATTATTGTAATAATGGGAGCCATGTATAAG-TTTGTTTTGAAATGATAATGTACAGCTAAACGAGTATAATG--CTCAA-ATTTTTGTATGTATAGTTTTTGTAATTCAACAAGTAGGGTTAAGAGGCAATAAGAATTATACACAATGTTGGATTTTATTTCATGTCTGTTCCTCTTGTCAGACATTGCCATCTTTCCCATGTTTCATCAGGTGTTCAGTAAGTTAACAACATTCACTC--TGAAAAGTACCACATGATTTATTGTATAAATAGAGTTGGAAATACAC-TGTGGTTCCTCATATCCGCAAGCTTATAATTCAGTTTGGAGACTACATTATATAAATGTAGAAATGCCATAATTATGCTTATAAATTGACTTTTTAAAACATGCAAATTAATATGGTAGAAACTGAATACATAAGTATGGGGGTGCCATATAAAGTAATGATCAATGCCAGTAGGTTTAATCAAGGAAAGTTTCTTG-GGGAAGTGAATTCTAAACAGAATTTGATATATTTGTTTCTTTAGCACTCA-TTTTATGTTTTCTAATTATAAATATAATGTATTCTCATATTCTCAAGGTAATAAATTTGCAAATTTTAAA-TTAGTAGGAAGAGTAAGAGGAACTAAGATCCCACTGTCCAAAGGTAATCATTAT-TCAGGTCCTGCTCTTTTCCTTCCATCTGGTTCTCTGATATTTTCTTCACGGTTGGCGTTATATCACATATTCAATATTGTAACCCACTTTGTGTTTCAGTCAGTGTCTATACATACA-ACTTTGAATGACACAAATGTCTCATAGAAACTAAGTTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13270512 1285 - 40200012 GGGAGCACTTGTAGTTAGTGGCA----------------TGTTTCTTAACACATTTC--TCGTATCAAGAATAACAAATACAATTCAGTGGGGAGTGGAGAAAAGAAATTAAGTGTGGCTGCACCGGCGAGTAACAATTGCAGccactttgtcaaggataaaacaatcatcaatgagctatacaaattgtttgtcaccagaataactgaatcaagaggttccagctcattaa-ttttttcattcccatatgcctgaacatctggaacatgaagaactagtgtgtat----------gtattaataggcaaAGCTGTAG--------TAATAACTTCTA-----------CAGTTATCTATTTTCCTATTACTATCTAATTTTTACACAAAAATTATCTAATTTTTACAAGAAAATACTTCAGATGAATATTGACAGAAACTCAGAAAGAAGTACGGCATA----AACTAATACAAAGGTAAAGTAGTAGTGGCAGAAAG-TTAGATCTTAAAAGTTTTTACAATGGGAGCATTATTGTAATAATGGGAGCCATGTATAAG-TTTGTTTTGAAATGATAATGTACAGCTAAACGAGTATAATG--CTCAA-ATTTTTGTATGTATAGTTTTTGTAATTCAACAAGTAGGGTTAAGAGGCAATAAGAATTATACACAATGTTGGATTTTATTTCATGTCTGTTCCTCTTGTCAGACATTGCCATCTTTCCCATGTTTCATCAGGTGTTCAGTAAGTTAACAACATTCACTC--TGAAAAGTACCACATGATTTATTGTATAAATAGAGTTGGAAATACAC-TGtggttcctcatatccgcaagcttataattcagtttggagactacattatataaatgtagaaatgccataattatgcttataaattgactttttaaaacatgcaaattaatatggtagaaactgaatacataagtatgggggtgccatataaagtaatgatcaatgccagtaggtttaatcaaggaaagtttcttg-gggaagtgAATTCTAAACAGAATTTGATATATTTGTTTCTTTAGCACTCA-TTTTATGTTTTCTAATTATAAATATAATGTATTCTCATATTCTCAAGGTAATAAATTTGCAAATTTTAAA-TTAGTAGGAAGAGTAAGAGGAACTAAGATCCCACTGTCCAAAGGTAATCATTAT-TCAGGTCCTGCTCTTTTCCTTCCATCTGGTTCTCTGATATTTTCTTCACGGTTGGCGTTATATCACATATTCAATATTGTAACCCACTTTGTGTTTCAGTCAGTGTCTATACATACA-ACTTTGAATGACACAAATGTCTCATAGAAACTAAGTTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3259226 1286 + 7633303 GGGAGCACTTGTAGTTAGTGGCA----------------TGTTTCTTAACACATTTC--TCGTATCAAGAATAACAAATACAATTCAGTGGGGAGTGGAGAAAAGAAATTAAGTGTGGCTGCACCGGCGAGTAACAATTGCAGccactttgtcaaggataaaacaatcatcaatgagctatacagattatttgtcaccagaataactgaatcaagaggttccagctcattaatttttttcattcccatatgcctgaacatctgggacatgaagaactagtgtgtat----------gtgttaataggcaAAGCTGTAG--------TAATAACTTCTA-----------CAGTTATCTATTTTCCTATTACTATCTAATTTTTACACAAAAATTATCTAATTTTTACACGAAAATACTTCAGATGAATATTGACAGAAACTCAGAAAGAAGTATGGTATA----AACTAATATAAAGGTAAAGTAGTAGTAGCAGAAAG-TTAGATCTTAAAAGTTTTTACAATGGGAGCATTATTGTAATAATGGGAGCCATGTATAAG-TTTGTTTTGAAATGATAATGTACAGCTAAACGAGTATAATG--CTCAA-ATTTTTGTATGTATAGTTTTTGTAATTCAACAAGTAGGGTTAAGAGGCAATAAGAATTATACACAATGTTGGATTTTATTTCATGTCTGTTCCTCTTGTCAGACATTGCCATCTTTCCCATGTTTCATCAGGTGTTCAGTAAGTTAACAACATTCACTC--TGAAAAGTACCACCTGATTTATTGTATAAATAGAGTTGGAAATACAC-TGtggttcctcatatcctcaagcttataattcagtttggagactacattatataaatgtagaaatgccataattatgcttataaattgactttttaaaacatgcaaattaatatggtagaaactgaatacataagtatgggggtgccatataaagtaatgatcaatgccagtaggattaatcaaggaaagtttcttg-gggaagtgAATTCTAAACAGAATTTGATATATTTATTTCTTTAGCACTCA-TTTTATGTTTTCTAATTATAAATATAATGTATTCTCATATTCTCAAGGTAATAAATTTGCAAATTTTAAA-TTAGTAGGAAGAGTAAGAGGAACTAAGATCCCACTGTCCAAAGGTAATCATTAT-TCAGGTCCTGCTCTTTTCCTTCCATCTGGTTCTCTGATATTTTCTTCACAGTTGGCGTTATATCACATATTCAATATTGTAACCCACTTTGTGTTTCAGTCAGTGTCTATACATACA-ACTTTGAATGACACAAATGTCTCATAGAAACTAAGTTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21961258 1284 - 58131712 GGGAGCACTTGTAGTTAGTGGCA----------------TGTTTCTTACCACATTTC--TCATATCAAGAATTACAAATACAATTCAGTGGGGAGTGAAGAAAAGAAATTAAGTGTGGCTGCATCGGCGAGTAACAATTGCAGccactttgtcaaggataaaacaatcatcaatgagctatacagattgtttgtcaccagaataactgaatcaagaggttccagctcattaatttttttcattcccatatgcctgaacatctgggacatgaagaaa-agtgtgtat----------gtgttaataggcaAAGCTGTAG--------TAATAACTTCTA-----------CAGTTATCTATTTTCCTATTACTATCTAATTTTTACACAAAAATTATCTAATTTTTACACGAAAATACTTCAGATGAATATTGACAGAAACTCAGAAAGAAGTATGGCATA----AACTAATATAAAGGTAAAGTAGTAGTGGTAGAAAG-TTAGAGCTTAAAAGTTTTTACAATGGGAGCATTATTATAATAATGAGAGCCATGTATAAG-TTTGTTTTAAAATGATAATGTACAGATAAATGAGTATAATA--CTCAA-ATTTTTGTATGTATAGTTTTTGTAATTCAACAAGTAGGGTTAAGAGGCAGTAAGAATTATACAGAATGCTGGATTTTATTTCATGTCTGTTCCTCTTGTCAGACATTGCTATCTTTCCCATGTTTCATCAGGTGTTCACTAAGTTAACAACATTCACTC--TGAAAAGTACCACATGATTTATTGTATAAATAGAGTTGGAAATACAC-TGTGGTTCCTCATATCCTCAAGCTTATAATTCAGTTTGGAGACTACACTATATAAATGTAGCAATGACATAATTAGGCTTATAAATTGACTTTTTAAAACATGCAAATTAATATGGTAGAAACTGAATACATAAGTATGGGGGTGCCGTATAAAGTAATGATCAATGCCAGTAGGATTAATCAAGGAAAGTTTCTTG-GGGAAGTGAATTCTAAACAGAATTTGATATATTTGTTTATTTAGCACTCA-TTTTATG-TTTCTAATTATAAATATAATGTATTCTCATATTCTCAAGGTAATACATTTGCAAATTTTAAA-TTAGTAGGAAGAGTAAGAGGAACTAACATTCCACTGTCCAAAGGTAATCATTAT-TCAGGTCCTGCTCTTTTCCTTCCATTTGGTTCTCTGATATTTTCTTCACGGTTGGGGTTATATCACATATTCAATATTGTAACCCACTTTGTGTTTCAGTCAGTGTCTATACATACA-ACTTTGAATGACACAAATGTCTCATAGAAACTAAGTTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 55336 1286 + 2620224 GGGAGCACTTGTAGTTAGTGGCA----------------TGTTTCTTAACACATTTC--TCGTATCAAGAATAACAAATACAATTCAGTGGGGAGTGGAGAAAAGAAATTAAGTGTGGCTGCACCGGCGAGTAACAATTGCAGccactttgtcaaggataaaacaatcatcaatgagctatacagattgtttgtcaccagaataactgaatcaagaggttccagctcattaatttttttcattcccatatgtctgaacatctgggacatgaagaactagtgtgtat----------gtgttaataggcaAAGCTGTAG--------TAATAACTTCTA-----------CAGTTATCTATTTTCCTATTACTATCTAATTTTTACACAAAAATTATCTAATTTTTACACGAAAATACTTCAGATGAATATTGACAGAAACTCAGAAAGAAGTATGGCATA----AACTAATATAAAGGTAAAGTAGTAGTGGCAGAAAG-TTAGATCTTAAAAGTTTTTACAATGGGAGCATTATTGTAATAATGGGAGCCATGTATAAG-TTTGTTTTGAAATGATAATGTACAGCTAAACGAGTATAATG--CTCAA-ATTTTTGTATGTATAGTTTTTGTAATTCAACAAGTAGGGTTAAGAGGCAATAAGAGTTATACACAATGTTGGATTTTATTTCATGTCTGTTCCTCTTGTCAGACATTGCCATCTTTCCCATGTTTCATCAGGTGTTCAGTAAGTTAACAACATTCACTC--TGAAAAGTACCACATGATTTATTGTATAAATAGAGTTGGAAATACAC-TGtggttcctcatatcctcaagcttataattcagtttggagactacactatataaatgtagaaatgccataattatgcttataaattgactttttaaaacatgcaaattaatatggtagaaactgaatacataagtatgggggtgccatataaagtaatgatcaatgccagtaggtttaatcaaggaaagtttcttg-gggaagtgAATTCTAAACAGAATTTGATATATTTGTTTCTTTAGCACTCA-TTTTATGTTTTCTAATTATAAATATAATGTATTCTCATATTCTCAAGGTAATAAATTTGCAAATTTTAAA-TTAGTAGGAAGAGTAAGAGGAACTAAGATCCCACTGTCCAAAGGTAATCATTAT-TCAGGTCCTGCTCTTTTCCTTCCATCTGGTTCTCTGATATTTTCTTCACGGTTGGCGTTATATCACATATTCAATATTGTAACCCACTTTGTGTTTCAGTCAGTGTCTATACATACA-ACTTTGAATGACACAAATGTCTCATAGAAACTAAGTTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2236214 1282 + 10629787 GGGAGCACTTGTAGTTAGCGTCA----------------TGTTTCTTAACACATTTC--TCGTATCCAGAATAACAAATACAGTTCAGTGGGGAGTGGAgaaaagaaattaagtgtggctgcatctgcaagtaacaattgcagccactttgtcaaggataaaacaatcatcaatgagctatacagattgtttgtcaccagaataactgaatcaagaagttccagctcattaatttttttcattcccatatgcctgaacatctgggacatgaagaaatagtgtgtat----------gtgttaataggcaAAGTTGTAG--------TAATAACTTCTA-----------CAGTTATCTATCTTCCTATTACTATCTAATTTTTACACAAAAATTATCTAATTTTTACACGAAAATACTTCAGATGAATATTGATAGAAACTCAGAAAGAAGTATGGCATA----AACTAATATAAAGATAAAGTAGTAGTGGCAGAAAG-TTAGAGCTTAAAAGTTTTTACAATGGGAGCACTATTGTAATAATGGGAGCCATGTATAAG-TTTGTTTTGAAATGATAATGTACACCTAAAAGAGTATAATG--CTCAA-ATTTTTGTATGTATAGTTTTTGTAATTCAACAAGTAGGGTCAAGAGGCAATAAGAATTATACAGAATGTTGGATTTTATTCCACGTCTGTTCCTCTTGTCAGACATTGCCATCGTTCCCATGTTTCATCAGGTGTTCAGTAAGTTAACAATTTTCACTCTGTGAAAAGTATCACATGATTTATTGTATAAATATAGTTGGAAATACAC-TGtggttcctcatatcctcaagcttatgattcagtttggagactacactatataaatgtagaaatgccataattatgcttataaattgactttttaaaacaagcaaattaatatggtagaaactgagtgcataagtatgggggtgccatataaagtaatgatcaatgccagtaggattaatcaaggaaagtttcttg-gggaagtgAATTCTAAACAGAATTTGATATATTTGTTTATTTAGCACTCA-TTTTATGTTTTCTAAT------TATAATGTATTCTCATATTCTCAAGGTAATAAATTTGCAAATTTTAAA-TTAGTAGGAAGAGTAAGAGGAACTAAGATCCCACTGTCCAAAGGTACTCATTAT-TCAGGTCCTGCTCTTTTCCTTCCATTTGGTTCTCTGATATTTTCTTCACGGTTGTCATTATATCACATATTCAATATTGTAACCCACTTTGTGTTTCAGTCAGTGTCTATACATATG-ACTTTGAATGACACAAATGTCTCATAGAAACTAAGTTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24197837 1270 + 132174527 GGGAGCACATGCAGTTAGTGGCA----------------TGTTTCTTAACTCATTTC--TCTGATCGGGAATAACAAATACAATGAAGTGGGGAGTGGAGAAAAGAAATTAAGTGTGGCTTCATCTGCAAGTAACAATTGCAGCCACTTTGTCAAGGGTAAAACAATCATCAATGAGCTATACAGATTGTTTGTCACCAGAATAACTAAATCAAGAGGTTCCAACTCATTAATTTTTTTCATTCCCATATGCCTGAACATCTGGGACTTGAAGAAATAGTGAGTAT----------GTGTTAATAAGAAAAGCAGTGC--------TAATGACTTCTACCTATTAGAAGCAGTTATCTATTATCTCATTACTATCTAATTTTTACACA----------------------AAAATACTTCAGATGAATATTGACAGAACCTCAGAAAGAAGTATGTCATA----AATTAATATAAAGGGAATGTAGTAATGGCAGAAAG-TGAGAGCTTAAAAGTTTTTACAATGGGAGCGCTACTGGAC------AAGCCATGTATAAG-TTTGTTTTGAAATGATAACGTTCAGCTAAAAGAGTATAATG--CTCAA-CTTTCTGTATATGTA-TCTTTGTAATTCAACAAGTAGGGTTAAGAGGCAACAAGAATTCTACAGAATGTTGGATTTCATTTCATGTCTGTTCTTCTTATCAGAGATTCCCATATTTCTAATGTTTCATCAGGTGCTCAATTTGTTACCAACATTCACTCTGTGAAAAGTACCACATGATTTATTGCACAAATATAGTTGGAAATACAC-TGTGGTTGCTCATATTCTCAAGCTTATAATTCAGTTTGAAGACTACGCTATATAAATGTAGAAATGCCATGATTATACTCATAAATTGACTTTTTAAAATATGCAAATTAATATGGTGAAAACTGAATACATAAGTATGGGGGTGCCATATAAAGTAATGATCAATGCGAGTGGGCTTAGTCAAGGAAAGTTTCCTG-GGGAGGTGAATTCTAAACAGAATTTGATATATTTGTTTATTTAGCACTCA-TTTTATGTTTTCTAATTATATATATAATGTAGTCTCAAATTCTCAAGGTAATAAATTTGCAAATTTCAAA-TTAGTAGGAAGAGTAAAAGGAACTAAGATCCCACAGTCCAAAGGTAATCATTAT-TCAGGGTTTGCTGTTTTCCTTCCATTTGGTTCTCTGATATTTTCTTCATGGTTACCATTATATCACATGTTC-ATATTACAACCCACATTGTGTTTCAGTAAGTGTCTATACATACAGGCTTTGAGTGATACAAATGTCTCATAGAAAGAAAGTTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10599786 1255 - 21366645 GGGAGCACATGCAGTTAGTGGCA----------------TGTTTCTTAACTCATTTC--TCTGATCAGGAATAACAAATACAATTAAGTGGGGAGTGGAGAAAAGAAATTAAGTGTGGCTTCGTCTGCAAGTAACAATTGCAGCCACTTTGTCAAGGGTAAAACAATCATCAATGAGCTATACAGA----TTGTCACCAGAATAACTAAATCAAGAGGTTCCAACTCATTAATTTTTTTCATTCCCATATGCCTGAACATCTGGGACATGAAGAAATAGTGAGTAT----------ATGTTAATAGGAAAAGCAGTGG--------TAATGACTTCTGCCTATTAGAAGCAGTTATCTATTTTCTCATTACTATCAAATTTTTACACA----------------------AAAATACTTCAGATGAATATTGACAGAACCTCAGAAAGAGGTATGCCATA----AACTAATATAAAGGTAATGTAGTAGTGGCAGAAAG-TTAGAGCTTAAAAGTTTTTACAATGGGAGCACTATTGGAT------AAGCCATGTATAAGTTTTGTTTTGAAATGATAACGTACAGCT--AAGAGTATAATG--CTCAA-CTTTTTGTATATGTA-TCTTTGTAATTCAACAAATAGGGTTAAGAGGCAGTAAGAATTATACAGAATGTTGGATTTCATTTCATGTCTGTTCCTCTTGTCAGACATTCCAATGTTTCCAATGTTTCATCAGGTGTTCAGTTTGTTAACAACATTCACTCTGTGAAAAGTACCACATGATTTATTGTACAAATATAGTTGGAAATACAC-TGTGGTTGCTCATATTCTCAAGCTTATAATTCAGTTTGGAGACTACATTACATAAATGTAGAAATGCCATGATCATACTCATAAACTGACTTTTTAAAACATGCAAATTAATATGGTGAAAACTGAATACATAAGTATGGGGGTGCCAT-----------ATCACTGCGAGTGGGATTAATCAAGGAAAGTTTCCTG-GGGAAGTGAATTCTAAACAGAATTTGATATATTTGTTTATTTAGCACTCA-TTTTATGTTTTCTAATTATATATATAATGTAGTCTCAAATTCTCAAGGTAATAAATTTGCAAATTTCAAA-TTAGTAAGGAGAGTAAAAGGAACTAAGATCCCGCAGTCCAAAGGTAATCATTAT-TCAGGGTTTGCTGTTTTCCTTCCATTTCATTCTCTGATATTTTCTTCGTGGTTACCATTATATCACATATTCAATATTACAACTCACATTGTGTTTCAGTCAGTGTCTATACATACAGACTTGGAGCGATACAAATGTCTCATAGAAATAAAATTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3743964 1271 - 13033340 GGGAGCACATGCAGTTAGTGGCA----------------TGTTTCTTAACTGATTTC--TCTGATCAGGAATAACAAATACAATTAAGTGGGGAGTGGAGAAAAGAAATTAAGTGTGGCTTCATCTGCAAGTAACAATTGCAGctactttgtcaagggtaaaacaatcatcaatgagctatacagattgtttgtcaccagaataactaaatcaagaggttccaactcattaatttttttcattcccatatgcctgaacatctgggacatgaagaaatagtgagtat----------gtgttaataggaaaagcagtgg--------taatgacttctacctattagaaGCAGTTATCTATTTTCTCATTACTATCAAATTTTTACACC----------------------AAAATACTTCAGACGAATATTGACAGAACCTCAAAAAGAAGTATGTCATA----AACTAATATAAAGGTAATGTAGTAGTGGCAGAAAG-TTAGAGCTTAAAAGTTTTTACAATGGGAGCACTATTGGAC------AAGCCATGTATAAG-TTTGTTTCAAAATGATAACGTACAGCTAAAAGAGTATAATG--CTCAA-CTTTTTGTATATGTA-TCTTTGTAATTCAACAAGTAGGGTTAAGAGGCAATAAGAATTATACAAAATGTTCGATTTCATTTCATGTCTGTTCCTCTTGTCAGACATTCCCATGTTTCTAATGTTTCATCAGGTGTTCAGTTTGTTAACAACATTCACTCTGTGAAAAGTACCACATGATTTATTGTACAAATATAGTTGGAAATACAC-TGTGGTTGCTCATATTCTCAAGCTTATAATTCAGTTTGGAAACTACAGTATATAAATGTAGAAATGCTATGATTATACTCATAAATTGACTTTTTAAAACATGcaaattaatatggtgaaaactgaatacataagtatgggggtgccatataaagtaatgatcactgcgagtaggattaatcaaggaaagtttcctg-gggaagtgaattctaaacAGAATTTGATATATTTGTTTATTTAGCACGCA-TTTTATGTTTTCTAATTATATATATAATGTAGTCTCAAATTCTCAAGGTAATAAATTTGCAAATTTCAAA-TTAGTAGGAAGAGTAAAAGGAACTAAGATCCCACAGTCCAAAGGTAATCATTAT-TCAGGGTTTGCTGCTTTCCTTCCATTTGGTTCTCTGGTATTTTCTTCATGGTTATCATTATATCACATATTCAGTATTATGACCCACATTGTGTTTCAGTCAGTGTCTATGCATACAGACTTGGAGCAATACAAAAGTCTCATAGAAGCATAGTTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5235767 1271 + 11604778 GGGAGCACATGCAGTTAGTGGCA----------------TGTTTCTTAACTCATTTC--TCTGATCAGGAATAACAAATACAATGAAGTGGGGAGTGGAGAAAAGAAATTAAATGTGGCTTCATCTGCAAGTAACAATTGCAGccactttgtcaagggtaaaacaatcatcagtgagctatacagattgtttgtcaccagaataactaaatcaagaggttccaactcattaatttttttcattcccatatgcctgaacatctgggacatgaagaaatagtgagtat----------gtgttaataggaaaagcagtgg--------taatgacttctacctattagaaGCAGTTATCTATTTTCTCATTACTGTCTAATTTTTACACA----------------------AAAATACTTCAGATGAATATTGACAGAACCTCAGAAAGAAGTATGTCATA----AACTAATATAAAGGTAATGTAGTAGTGGCAGAAAG-TTAGCGCTTAAAAGTTTTTACAATAGGAGCACTATTGGAC------AAGCCATATATAAG-TTTGTTTTCAAATGATAATGTACAGCTAAAAGAGTATAATG--CTCAA-CTTTTTGTATATGTA-TCTTTGTAATTCAACAAGTAGGGTTAAGAGGCAATAAGAATTATACAGAATGTTGGATTTCATTTCATGTCTGTTCCTCTTGTCAGACATTCCCATGTTTCTAATGTTTCATCAGGTGTTCAGTTTGTTAACAACATTCACTCTGTGAAAAGTACCACATGATTTATTGTACAAATATAGTTGGAAATACAC-TGTGGTTGCTCAtattctcaagcttataattcagtttggagactacactatataaatgtagaaatgccatgattatactcataaattgactttttaaaacatgcaaattaatatggtgaaaactgaatacataagtatgggggtgccatataaagtaatgatcaatgcgagtgggattaatcaaggaaagtgtcctg-gggaagtgAATTCTAAACAGAATTTGATATATTTGTTTATTTAGCACTCA-TTTTATGTTTTCTAATTATATATATAATGTAGTCTCAAATTCTCAAGGTAATAAATTTGCAAATTTCAAA-CTAGTAGGAAGAGTAAAAGGAACTAAGATCCCACAGTCCAAAGGTAATCATTAT-TCAGGCTTTGCTGTTTTCCTTCCATTTGGTTCTCTGATATTTTCTTCATGGTTACCATTATATCACATATTCAATATTACAACCCACATTCTGTTTCAGTCAGTGTCTATACATGCAGACTTTGAGCGATACAAATGTCTCATAGAAACAAAGTTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 138286 1224 + 36342412 GGGAGCCCATGTAGTTAGTGACA----------------TGTTTCTTAACGCAT--------GATCCAGAATCACAAATGCAATGGAGTAGGGGACAGGGAAAAGAAATTAAGCATGACTACATCTGCAAGTAACAATCGAAGCCCCTTTGTCAAGGGTAAAACAATCATCAATGAGCTATATAGATTGTTTGTAACCAGAATAACTAAATCAAGAAGTTCCAACTCATTGATTTTTTTCATTCCCATATGCCTGAACATCTGGAACACAAAGAAATAGT--GTAC----------ATGTTAATAGACAACGCAGTGG--------TAATGATTTCCACCTATTAGAAGCAGTTATCTATTTTCTCTTCATGATCTAAATTTTTCAAA----------------------AACATACTTTAGGTAAATTCTGATAGAAACTT----AGAAGTATGGCATA----TGTGAATATAAAGGTAGGGTACTAACAGCATAAAGATTATAGCTGAAAATTTTTTACAATGAGAGAATTGTTGGAT------AAGCCATTTATAAA-TTTGATATGAACTGATCATTTATAGCTAAAGAGGTATCATATTCTTAA-CTTTCTGTATATGTATGTGTTTTAATTAAACAACTACAGTTAAGTGGCAACAAAAATTGTAGAGAATGGTGAATTGTGCTTCCTGTCTATACCTCGTGTTAGATGTT-TCATGTTTCCAGTGTTTCATCAGGTATTCAGGAGGTTAACAACATCCACTCTCTGAAAAGTACCAC--GAGTTACTGTGCAAATATAGTAGGAAACAC-T-TGTAGTTCCTTCTGTACTCAAACTTATGACCCAGTTTGGAAACTACATCCCATAAATGTGGAAATACTGTAATTACGCTCACAAATTG-CTTTTTTAAGCATGCAAATTAATATGGCACAAACTGAATACATAAGTATGGGTGTGTGGTATAAAATAATGATCAATGCCAATGGGATTAATCAAGGAAGGTTTCTTGTGGGAAGTGAATTCTAAACAGAATTTGATATA----TTTATTTAGCACTCA-TTTCATGttttctaattataaatataatatattcttatattctcccagtaataaatttatcaattccaagtttagtaagaagaataaaagaaattaaaaacccactgtccgaagataatcactct-ttaggctctgttcttttccttccattt-gttctctgatatTTTCTGGATAGTTGCCATAATATTAC-----------------CCACTTTGTGTTTTGATTAA---CCATACATAAAGACTTTGATTGATTCAAGTGCCTCACAG----------- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13423600 1244 + 40214260 GAGAGCACATGCAGTTAGTGGTATGTTTTGGGTTTTTTTTGTTTTTTGTTTTTTTTCCTTCTGATCCAGAATGACAA----AGTGGTGTGGGGAATTGAGAAAAGAAATTAACTGTAGCTACATCTGCAAGTAACAATTGTAGCCACTTTGTCAAGGGTAAAACAATCATCAATGAGC-----------------AGCAGAATAACAGAATCAAAAGGTTCCAATTCATTGATTTTTTTCATTCCCATATGCCTGAACATCTGGGACACAAAGAAACAGTGTGTAT----------GTGTTAATAGGCTATTCAGCAG--------TAGTGACTTCTACCTACTACATGAAGTTATCCATTTTCTCTTTACTATCTAG-TTTTACAAG----------------------AAAATACTGTAGCTGATTTCTGATGGAAACTCAGATAGAATTGTGGCATA----TATGAACATAATGATAATATACTATTGATAGAAAA-TTAGAGCTTAACA-TTTTTATATGGACAGCATTGCTGGAT------GAAC----TATGAG-CTTGATTTGAAATGATAATGTACAGCTATAAAAGTATAATA--CTCAACATTTTTGCATATATA-TTTTTAAAATTCAACAACTAGAGTTTAGTGGCAATAAAAATTGTAGAGAATGTTGGACTGTATTTCATGTTTATTCCTCTTGTTACATGTCACCACATTTCCAATGGTTCATCAGGTGTTCAGTAAGTTAACA---TTCAATCTGTGAAAAGT---ACATGAATTATTCCAGAAATACAGCAAGACATACACTTGAGGTTCCTCATATTCTCAAGTTTATACTTCAATGTGGGGACTACACCatatacatgtggaaatac-ataattatgctcataaattgattttttgaaacatgcaaattaatatggtaccaacagaatacacaagtatgggggcatggtacaaagaaatgatcggcaccagtgagattaatcagagaaggtttcctgagggaattgaattctaaactgCATTTGGCATATTTG-TTACTTAGTACTTG-TTTCATA--TCCTAATCATAAAAATAATGTAATCTCACAT--------TAATAAATTTGT-AATTTCAAA-TTAGTAAGAAGAACAAAAGAAGCTAAGAATCCACTG-CCAAAGACAATCACTATACCAACCTCTGTTGTTTTCATTTCATTTTCTCCTCTGGTATTCTCTATACAACTACTTTAATGTCATATATTCAATA-TACAATTCTCTTTGTGTTTTGG-CAATGTCTATGCACACAGACTCTGAGTGATACAAATATCTCATAAAAATTAAGTTT i canFam3.chr30 C 0 I 161 s dasNov3.JH579377 1812199 1251 - 2868945 GGGAGCACATGCAGCTAGAGGCA----------------TGTTTCTTAATTCATTTC--TCTGATCCAGAATAACAAATACAATGGACAGGT---TGGAGAAAAGAAATTTAGCATGACTACATCTGCAAGTAACAATTACAGCTGCTTTGTCAAGGGTAAAACAATCATCAATGAGCTATACAGATTGTTTGTCACCAGAATAACTGAATCAAGAGGTTCCAACTCATTGA-GTTTTTCATTCCCATATGCCTAAACATCTGGGACACAGAGAAATGGTGTGTGTGTGTGTGTGCGTGTTAATAGGCAATGCTGTGGTAATGACTTAATGACTTCTACCTACTAGAAACACTCATTTGTTTTCTCTTTGCTATCAAAATTTTATAAG----------------------AAAATACTTTAGACAAATTCTTTCTTTCAGATGGAAAGAACAATGGCATA----TATGAATATATAGGTAGCTTATTAACTGCCAAAAA-TCAAAGCTTAAAATTTTTAACAATGTCCACATTGTTGGAC------AAACTTTTTATAAG-TTTGATTTGAAATGACTATATACAGCTAAAGGAGTTTAATA--CTCAA-CTTTTT-----TGTA--TTTGCTAATTCAACAACTAGGGTCTAATGGTAAT--TAATTGTAGAGAAAGTTGGATTATATTT-ATGTCTATTCTTCCTGTCAGACATGACCACATTTCCAGTGTTTCATCAAATGTTCATTAAGT---CAATATTCACTCTGTGTAATGCACTGGGTGAGTTATTGTAGAAATATTGGAAGAAATACACTTGCAGTTGCTGATATCTTCAAGCTTATAACTCAGTTTGGAGACTACACAATATAAAAGGGAAAATACCATAATTAGGCTCATAAATTAATTTTTTAAAGCATGCAAATTAATATGGTGCAAACTGAATATATAAATATGGGGATGCAGTATGAAGTAATGATCAATGCCAATGGGATTAATCAAGGAAGTTTCTCAG-GGGAAGTGAATTCTAAACAGAATTTGATATATTTGTTCATTTAGCAGTCCTTTTTATGTTTTCTAATTATAAAATTAATGTATTCTTAT--------GATAATAAATTTGCAAATTTCAAA-TTAGTAAGAA---TAAAAGGATCTACAATAACATTGTCCAAAGATATTCACTAT-TCGGGTTCTGCTGTTCTCCTTCCATTTTGTTTTCTGACATTTTCTACATAGTTACCATGAAATTACATATTCAGTTTTATAACCTACAATGTATTTCAGACAACATCTATACACACAGACTTTGAGTGATACAAATGCTACAT------------- i dasNov3.JH579377 C 0 C 0 a score=1847336.000000 s hg38.chrUn_KI270749v1 25979 159 + 158759 AATCAAATC-----AAGAAACTAAGTTTAATGCCAGTCTATATCAATGTACCGT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAATAACTCC--AAAGGT---ATTTTTAT---T--AACATTTTCTCTTAGTGTTACTTTCCTAAGGTAGACTTTA s panTro5.chr1 101808381 159 - 228573443 AATCAAATC-----AAGAAACTAAATTTAATGCCAGTCTATATCAATGTACCAT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAAAAACTCC--AAAGAT---ATTTTTGT---T--AACATTTTCTCTTAGTGTTATTTTCCTAAGCTAGACTTTA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44385549 159 + 99763055 AATCAAATC-----AAGAAACTAAGTTTAATGCCAGTCTATATCAATGTACCAT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAATAACTCC--AAAAAT---ATTTTTGT---T--AACATTTTTTCTTAGTGTTATTTTCCTAAGGTAGACTTTA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 16992 159 - 24701 AATCAAATC-----AAGAAACTAAGTTTAATGCCAGTCTATATCAATGTACCGT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAATAACTCC--AAAGAT---ATTTTTGT---T--AACATTTTCTCTTAGTGTGACTTTCCTAAGGTAGACTTTA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67516057 159 - 121039945 AATCAAATC-----AAGAAACTAAGTTTAATGCCAGTCTATATCAATGTACTGT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAATAACTCC--AAAAAT---ATTTTTGT---T--AACATTTTTTCTTAGTGTTATTTTCCTAAGGTAGACTTTA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23422989 159 + 169600520 AATCAAATT-----TAAAAACTAAGTTTAATGCCAGTCTATATCAAGGTACTGT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAACAACTCC--AAAAAT---ATTTTTGT---T--AACATTTTTTCTTAGTGCTATTTTCCTAAGGTAGACTTTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24026961 159 + 171882078 AATCAAATT-----TAAAAACTAAGTTTAATGCCAGTCTATATCAAGGTACCGT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAACAACTCC--AAAAAT---ATTTTTGT---T--AACATTTTTTCTTAGTGCTATTTTCCTAAGGTAGACTTTA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13271797 159 - 40200012 AATCAAATT-----TAAAAACTAAGTTTAATGCCAGTCTATATCAAGGTACCGT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAACAACTCC--AAAAAT---ATTTTTGT---T--AACATTTTTTCTTAGTGCTATTTTCCTAAGGTAGACTTTA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3260512 159 + 7633303 AATCAAATT-----TAAAAACTAAGTTTAATGCCAGTCTATATCAAGGTACCGT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAACAACTCC--AAAAAT---ATTTTTGT---T--AACATTTTTTCTTAGTGCTATTTTCCTAAGGTAGACTTTA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21962542 159 - 58131712 AATCAAATT-----TAAAAACTAAGTTTAATGCCAGTCTATATCAAGGTACTGT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAATAACTCC--AAAAAT---ATTTTTGT---T--AACATTTTTTCTTAGTGTTATTTTCCTAAGGTAGACTTTA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 56622 159 + 2620224 AATCAAATT-----TAAAAACTAAGTTTAATGCCAGTCTATATCAAGGTACCGT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAACAACTCC--AAAAAT---ATTTTTGT---T--AACATTTTTTCTTAGTGCTATTTTCCTAAGGTAGACTTTA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2237496 158 + 10629787 AATCAAATT-----TAAAAACTAAGTTTAATGCCAGTCTATATCAAGGTACCGT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAA-ATAAATAACTCC--AAAAAT---ATTTTTGT---T--AACATTTTTTCTTTGTGTTATTTTCCTAAGGTAGACTTTA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24199107 161 + 132174527 AATCAAATT-----AAGAAACTAAGTTTAATGCCAGTTTATATCAATGTACCAT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCAAA-TTTTGTTAACATAAATAACTCC--aaaaat---atttttgttaat--aatattttttCTTAGTATT-TTTTCCTAAGGTAGACttta i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10601041 157 - 21366645 AATCAAATT-----AAGAAACTAAGTTTAATGCCAGTCTATATCAATGTACCAT---------------TTCCTTCTAGCTAAATA-----GCTTTTCCAAA-TTTTGTTGACATAAATAACTCC--AAAAAT---ATTTTTGTTAAT--AACATTTTTTCTTAGTATTCTTTTCCTAAGGTAGACttta i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3745235 159 - 13033340 AATCTAATT-----AAGAAACTAAGTTTAATGCCAGTCTATATCAAGGTTCCAT---------------TTCCTTCTAGCTAAATATTTAGGCTTTTCCACA-TTTTGTTAACATAAATAAATCC--AAAAAT---ATTTTTGTTAAT--AACA---TTTCTTAGTGTTATTTTCCTAAGGTAGACTTTA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5237038 162 + 11604778 AATCAAATT-----AAGAAACTAAGTTCAATGCCAGTCTATATCAATGTACCAT---------------TTCCTTCTAGCTAAATATCTAGGCTTTTCAAAA-TTTTGTTAACATAAATAACTCC--AAAAGT---ATTTTTGCTAAT--AACGTTTTTTCTTAGTGTTATTTTCCTAAGGTAGACTTTA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 139510 165 + 36342412 -----------------AAACTAAACTGAAGGCCATTGTGTATCGATGTACTATATAATCACCAACTG-TTAACTCCACCTAAATATTTAGGTTTATCCAAA--TCTGTTAACATAAATAACTCT--AAAAATATCATTTTTAT---TAAAACAATTTTTCCTAGTGTTATTTTCTTAAAGTGAACTGCA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 13425005 179 + 40214260 aataaaatcttttaaacaaaTTAAATTTAATGCCattccaaataaatgtaccat--attcacaaattatttccctagagttaaatacttaagtctttcaaaatttttgttaacataaataacttcaaaaaaac---atttttgttcat--aac-ttttttcttAGCATTATCTTC---AGGTAGATTTca i canFam3.chr30 I 161 I 1467 s dasNov3.JH579377 1813450 147 - 2868945 ---------------AAATACCAACGTTAATGTCAGTCtgtgtaaatgtaccaa--aatcacaaactaattcccaatagctatatatttaggtttttctaaa-ttat-----------------c--ataaac---atttttatta-t--aacttctttccttataattattttcttaaggtagatttca i dasNov3.JH579377 C 0 C 0 a score=41436.000000 s hg38.chrUn_KI270749v1 26138 5 + 158759 ACAAT s panTro5.chr1 101808540 5 - 228573443 ACAAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44385708 5 + 99763055 AAAAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 17151 5 - 24701 ACCAT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67516216 5 - 121039945 ACAAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23423148 5 + 169600520 ACAAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24027120 5 + 171882078 ACAAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13271956 5 - 40200012 ACAAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3260671 5 + 7633303 ACAAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21962701 5 - 58131712 ACAAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 56781 5 + 2620224 ACAAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2237654 5 + 10629787 ACAAT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24199268 5 + 132174527 ataat i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10601198 5 - 21366645 ataat i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3745394 5 - 13033340 ATAAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5237200 5 + 11604778 ATAAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 139675 4 + 36342412 AC-AT i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1813597 5 - 2868945 aaagc i dasNov3.JH579377 C 0 C 0 e canFam3.chr30 13425184 1467 + 40214260 I a score=618877.000000 s hg38.chrUn_KI270749v1 26143 52 + 158759 TTACTATAATAAATTATAGAAAATGATCATTTTAAGGTTCCTTATTCTTGTA--------------- s panTro5.chr1 101808545 52 - 228573443 TTACCATAATAAATTATATAAAATGATCATTTTAAGGTTCCTTATACTTGTA--------------- i panTro5.chr1 C 0 C 0 s panPan2.chr15 44385713 52 + 99763055 TTACTATAATAAATTATAGAAAATGATCATTTTAAGGTTCCTTATACTTGTA--------------- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 17156 52 - 24701 TTACTATAATAAATTATAGAAAATGATCATTTTAAGGTTCCTTATACTTGTA--------------- i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67516221 52 - 121039945 TTACTATAATAAATTATAGAAAATGATCATTTTAAGGTTCCTTATCCTTGTA--------------- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23423153 52 + 169600520 TTACCATAATAAATTATATCAAATGATCATTTTAAGGTTCCTTATACTTGTA--------------- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24027125 52 + 171882078 TTACCATAATAAATTATATCAAATGATCATTTTAAGGTTCCTTATACTTGTA--------------- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13271961 52 - 40200012 TTACCATAATAAATTATATCAAATGATCATTTTAAGGTTCCTTATACTTGTA--------------- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3260676 52 + 7633303 TTACCATAATAAATTATATCAAATGATCATTTTAAGGTTCCTTATACTTGTA--------------- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21962706 52 - 58131712 TTACCATAATAAATTATATCAAACGATCATTTTAAGGTTCCTTATACTTGTA--------------- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 56786 52 + 2620224 TTACCATAATAAATTATATCAAATGATCATTTTAAGGTTCCTTATACTTGTA--------------- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2237659 52 + 10629787 TTACCATAATAAATTATATCAAATGATCATTTTAAGGTTCCTTATATTTGTA--------------- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24199273 52 + 132174527 ttattataataaattCCAGAAAATGATCATTTTAAGGTTCCTTATACTTGTA--------------- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10601203 52 - 21366645 ttattataataaattCCATAAAATAATCATTTCAAGGTTCCTTATACTTATA--------------- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3745399 52 - 13033340 TTATTATAATAAATTCCAGAAAATAATCATTTTAAGGTTCCTTATACTTGTA--------------- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5237205 52 + 11604778 TTATTATAATAAATTCCAGAAAATAATCATTTTAAGGTTCCTTATACTTGTA--------------- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 139679 52 + 36342412 TTATTACAATATATTATAAATCATGGTCATTTTAAGATTCCTGATGCTTTTA--------------- i otoGar3.GL873530 C 0 N 0 s canFam3.chr30 13426651 52 + 40214260 TTCTTATAACTAATCAGAAGTCATGATCATTTTAAGTTTCCTTATATCTGTA--------------- i canFam3.chr30 I 1467 C 0 s dasNov3.JH579377 1813602 67 - 2868945 tcatcataataaaacagaaatcatgatcattttaaggttccttgtattttttgtttgaagtctcaag i dasNov3.JH579377 C 0 C 0 a score=920071.000000 s hg38.chrUn_KI270749v1 26195 98 + 158759 CTATTTGTAAATA--AT--GTTATCACCTCTTTCG----AA----TTATTTCTTCTTGATATTTTATTGCATTGATCAGAATTCCCAG------AATTG--TAATATAATGTTAATTA s panTro5.chr1 101808597 104 - 228573443 ATATTTGTAAATAATAT--GTTATCACTTCTTGCA----AATTAGTTATTTCTGCTTGATATTTTATTGCATTGATCAGAATTACCAG------AATTG--TAATATAATGCTAATTA i panTro5.chr1 C 0 C 0 s panPan2.chr15 44385765 102 + 99763055 ATATTTGTAAATAATATAAGTTATCACCTCTCTCT----AG----TTATTTCTGCTTGATATTTTACTGCATTGATCAGAATTCCCAG------AATTG--TAACATAATGCTAATTA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 17208 104 - 24701 ATATTTGTAAAT---AT--GTTATCACCTCTTTCG----AATTAGTTATTT---CTTGATATTTTATTGCATTGATCAGAATTCCCAGAATTGTAATTG--TAATATAATGCTACTTA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67516273 102 - 121039945 ATATTTGTAAATAATATGAGTTATGACCTCTTTCT----AG----TTATTTCTGCTTGATATTTTATAGCATTGATCAGAATTCCCAG------AATTG--TAACATAATGCTAATTA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23423205 99 + 169600520 ACATTTGTAAATAATATGAGTTATCACCTCTT-------AG----TTATTTCTGCTTGATATTTTATTACATTGTTCAGAATTCCCAG------AATAG--TAACATAATGCTAATTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24027177 99 + 171882078 ACATTTGTAAATAATATGAGTTATCACCTCTT-------AG----TTATTTCTGCTTGATATTTTATTACATTGTTCAGAATTCCCAG------AATAG--TAACATAATGCTAATTA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13272013 99 - 40200012 ACATTTGTAAATAATATGAGTTATCACCTCTT-------AG----TTATTTCTGCTTGATATTTTATTACATTGTTCAGAATTCCCAG------AATAG--TAACATAATGCTAATTA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3260728 99 + 7633303 ACATTTGTAAATAATATGAGTTATCACCTCTT-------AG----TTATTTCTGCTTGATATTTTATTACATTGTTCAGAATTCCCAG------AATAG--TAACATAATGCTAATTA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21962758 99 - 58131712 ATATTTGTAAATAATATGAGTTATCACGTCTT-------AG----TTATTTCTGCTTGATATTTTATTACATTGTTCAGAATTCCCAG------AATTG--TAACATAATGCTAATTA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 56838 99 + 2620224 ATATTTGTAAATAATATGAGTTATCACCTCTT-------AG----TTATTTCTGCTTGATATTTTATTACATTGTTCAGAATTCCCAG------AATAG--TAGCATAATGCTAATTA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2237711 99 + 10629787 ATATTTGTAAATAATATGAGTTATCACCTCCT-------AG----TTATTTCTGCTTGATATTTAATTATGTTGTTCAGAATTCCCAG------AATTG--TAACATAATGCTAATCA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24199325 106 + 132174527 ACATTTATAAATAATATGAATTATCACCTCTTTCTAATCAG----TTATTTCTGCTTGATATTTTATTGCATTGATCAGAATTCCCAG------AATTG--TAGCATAATGTTAATTA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10601255 106 - 21366645 ATATTTGTAAATAATATGAGTTATCACCTCTTTCTAATCAG----TTATTTCTGCTTGATATTTTATTGCATTGATCAGAATTCCCAG------AATTG--CAACATAATGTTAATTA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3745451 102 - 13033340 ATATTTGTAAATAATATGAGTTATCACTTCTTTCTAATCAG----TTATTTCTGCTTGCTATTTTATTGCATTGATCAGAATTCCCAG------AATTG--TAACATAATG----TTA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 5237257 106 + 11604778 ATATTTGTAAATAATATGAGTTATCATCTCTTTCTAATCAG----TTATTTCTGCTTGATATTTTATTGTATTGATCAGAATTCCAAG------AATTG--TAACATAATGTTAATTA i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13426703 105 + 40214260 ATATTAATAAACAACAGAAACTATCATTTCTTTAAATT-AC----TTATTCCTGTTTTTAATTTTATTGCATTGATCAGGATCCTCAG------GAATG--TGTCAAAATGTGAGTTA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1813669 99 - 2868945 atatttgttaagaa-attgctttccatgtgttta-----ac----atattt---atcagtaatttatgacaatttctaaccttactag------aattggctcatttaatttttttta i dasNov3.JH579377 C 0 N 0 a score=702764.000000 s hg38.chrUn_KI270749v1 26293 82 + 158759 TTAAATATTACATTACTTCTCATGTTAATAGTTATT-ATTTTGTAAATATGATGCTATTAGCAAATTTTAGATTGGCATCCTT s panTro5.chr1 101808701 82 - 228573443 TTAAATCTTACATTCCTTCTCATGTTAATAGTTATT-ATTTTGTAAATATAATGCTATTAGCAAATTTTAGATTGGCATCCTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 44385867 82 + 99763055 TTAAATCTTACATTCCTTCTCATGTTAATAGTTATT-ATTTTGTAAATATGATGCTATTAGCAATTTTTAGATTGGCATCCTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 17312 82 - 24701 TTAAATATTACATTCCTTCTCATGTTAATAGTTATT-ATTTTGTAAATATGATGCTATTAGCAAATTTTAGATTGGCATCCTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67516375 82 - 121039945 TTAAATCTTACATTCCTTCTCATGTTAATAGTTATT-ATTTTGTAAATATGATGCTATTAGCAATTTTTAGATTGGCATCCTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23423304 83 + 169600520 TTAATTCTTACTTTCCTACTCATGTTAATAGTTATTAATTTTGTAAATATGATGTTATTAGCAAATTTTAGATTGGCATCCTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24027276 83 + 171882078 TTAATTCTTACTTTCCTACTCATGTTAATAGTTATTAATTTTGTAAATATGATGTTATTAGCAAATTTTAGATTGGCATCCTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13272112 83 - 40200012 TTAATTCTTACTTTCCTACTCATGTTAATAGTTATTAATTTTGTAAATATGATGTTATTAGCAAATTTTAGATTGGCATCCTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3260827 83 + 7633303 TTAATTCTTACTTTCCTTCTCATGTTAATAGTTATTAATTTTGTAAATATGATGTTATTAGCAAATTTTAGATTGGCATCCTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 21962857 83 - 58131712 TTAATTCTTACTTTCCTTCTCATGGTAATAGTTATTAATTTTGTAAATATGATGCTATTAGCAAATTTTAGATTGGCATCCTT i chlSab2.chr26 C 0 N 0 s manLeu1.NW_012108674v1 56937 80 + 2620224 TTAATTCTTACTTTCCTTCTCATGTTAATAGTTATTAATTTTGTAAAT---ATGTTATTAGCAAATTTTAGATTGGCATCCTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2237810 83 + 10629787 TTAATTCTTACTTTCCTTCTCATGTTAACAGTTATTAATTTTGTAAATATGATGCTATTAGCAAATTTTAGATTGGCATCCTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24199431 68 + 132174527 TTA----TTA-TTTCCTTCTCATGTTA----------ATTTTGTAAATATAATGCTATTAGCAAATTTTAGATTGGCATCTTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10601361 68 - 21366645 TTA----TTA-TTTCCTTCTCATGTTA----------ATTTTGTAAATATAATGCTATTAGCAAATTTTAGATTGGCGTCCTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 3745553 68 - 13033340 TTA----TTA-TTTCCTTCTCATGTTA----------ATTTTGTAAATATAATGCTATTAGCAAATTGTAGATTGGCATCCTT i cebCap1.NW_016107324v1 C 0 N 0 s aotNan1.NW_018501505v1 5237363 68 + 11604778 TTA----TTA-TTTCCTTCTCATGTTA----------ATTTTGTAAATATAATGCTATTAGCAAATTTTAGATTGGCATCCTT i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13426808 73 + 40214260 TTC----TTAGATTCTTGCTCAT-TAAATAGTAATGAATTCAATAAATATGATG---TTTATAAATTTT--ATTGGCATGCTT i canFam3.chr30 C 0 C 0 a score=222821.000000 s hg38.chrUn_KI270749v1 26375 33 + 158759 AATATACTATTCAGATGT--TAGCAATTGCACTTT s panTro5.chr1 101808783 33 - 228573443 AATATATTAGTTAGATGT--TAGTAATTCCACTTT i panTro5.chr1 C 0 I 54727 s panPan2.chr15 44385949 33 + 99763055 AATATATTAGTTAGATAT--TAGTAATTCCACTTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 17394 33 - 24701 AATATATTATTTAGATGT--TAGTAATTGCATTTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67516457 32 - 121039945 AATATATTAGTTAGATA---TAGTAATTCCACTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23423387 33 + 169600520 AATATATTAGTTAGACAT--TAGTAATTCCACATT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24027359 33 + 171882078 AATATATTAGTTAGACAT--TAGTAATTCCACATT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13272195 33 - 40200012 AATATATTAGTTAGACAT--TAGTAATTCCACATT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3260910 33 + 7633303 AATATATTAGTTAGACAT--TAGTAATTCCACATT i cerAty1.NW_012000887v1 C 0 C 0 s manLeu1.NW_012108674v1 57017 33 + 2620224 AATATATTAGTTAGACAT--TAGTAATTCCACATT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2237893 33 + 10629787 AATATATTAGTTAGACAT--TAGTAATTCCACATT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24199499 33 + 132174527 AAGGTATTAGTTAGATAT--TAATATTTTCCTTTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10601429 33 - 21366645 AATGTATTAGTTAGATAT--TAGTATTTTCACTTT i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 5237431 33 + 11604778 AATGTATTAGTTAGATAT--TAGTATTTTCACTTT i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 13426881 34 + 40214260 AATATATTAGGTAAGTATACTGGTATTTCTACTT- i canFam3.chr30 C 0 C 0 a score=22284.000000 s hg38.chrUn_KI270749v1 26408 4 + 158759 TCCC s panPan2.chr15 44385982 4 + 99763055 TCCC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005671v1 17427 4 - 24701 TCCT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67516489 4 - 121039945 TCCC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 23423420 4 + 169600520 TCCC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 24027392 4 + 171882078 TCCC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 13272228 4 - 40200012 TCCC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 3260943 4 + 7633303 TCCC i cerAty1.NW_012000887v1 C 0 C 0 s manLeu1.NW_012108674v1 57050 4 + 2620224 TCCC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 2237926 4 + 10629787 TCCC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 24199532 4 + 132174527 TCTC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10601462 4 - 21366645 TCCC i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 5237464 4 + 11604778 TCCC i aotNan1.NW_018501505v1 C 0 N 0 s canFam3.chr30 13426915 1 + 40214260 -C-- i canFam3.chr30 C 0 C 0 e panTro5.chr1 101808816 54727 - 228573443 I a score=11443.000000 s hg38.chrUn_KI270749v1 26412 2 + 158759 TA s panPan2.chr15 44385986 2 + 99763055 TA i panPan2.chr15 C 0 N 0 s gorGor5.CYUI01005671v1 17431 2 - 24701 TA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67516493 2 - 121039945 TA i nomLeu3.chr6 C 0 I 1 s rheMac8.chr7 23423424 2 + 169600520 TA i rheMac8.chr7 C 0 N 0 s macFas5.chr7 24027396 2 + 171882078 TA i macFas5.chr7 C 0 I 1 s macNem1.NW_012010577v1 13272232 2 - 40200012 TA i macNem1.NW_012010577v1 C 0 N 0 s cerAty1.NW_012000887v1 3260947 2 + 7633303 TA i cerAty1.NW_012000887v1 C 0 N 0 s manLeu1.NW_012108674v1 57054 2 + 2620224 TA i manLeu1.NW_012108674v1 C 0 N 0 s colAng1.NW_012121598v1 2237930 2 + 10629787 TA i colAng1.NW_012121598v1 C 0 N 0 s calJac3.chr10 24199536 1 + 132174527 -A i calJac3.chr10 C 0 I 2 s saiBol1.JH378136 10601466 1 - 21366645 -A i saiBol1.JH378136 C 0 I 2 s canFam3.chr30 13426916 2 + 40214260 TA i canFam3.chr30 C 0 C 0 e panTro5.chr1 101808816 54727 - 228573443 I a score=-1299.000000 s hg38.chrUn_KI270749v1 26414 3 + 158759 -AAA s gorGor5.CYUI01005671v1 17433 3 - 24701 -AAA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr6 67516496 2 - 121039945 -AA- i nomLeu3.chr6 I 1 N 0 s macFas5.chr7 24027399 2 + 171882078 -AA- i macFas5.chr7 I 1 N 0 s calJac3.chr10 24199539 2 + 132174527 -GA- i calJac3.chr10 I 2 C 0 s saiBol1.JH378136 10601469 2 - 21366645 -AA- i saiBol1.JH378136 I 2 C 0 s canFam3.chr30 13426918 3 + 40214260 TAA- i canFam3.chr30 C 0 C 0 e panTro5.chr1 101808816 54727 - 228573443 I a score=989.000000 s hg38.chrUn_KI270749v1 26417 10 + 158759 AGGCTCTTTT s gorGor5.CYUI01005671v1 17436 10 - 24701 AGGCTCTTTT i gorGor5.CYUI01005671v1 C 0 C 0 s calJac3.chr10 24199541 10 + 132174527 TTGTTCTTTT i calJac3.chr10 C 0 N 0 s saiBol1.JH378136 10601471 10 - 21366645 TTGTTTTTTT i saiBol1.JH378136 C 0 N 0 s canFam3.chr30 13426921 2 + 40214260 --GT------ i canFam3.chr30 C 0 C 0 e panTro5.chr1 101808816 54727 - 228573443 I a score=2853.000000 s hg38.chrUn_KI270749v1 26427 15 + 158759 TGCGGCTTTTTGTCC s gorGor5.CYUI01005671v1 17446 15 - 24701 TGCGGCTTTTTGCCC i gorGor5.CYUI01005671v1 C 0 C 0 s canFam3.chr30 13426923 15 + 40214260 TGTGTTTTTTTGTTC i canFam3.chr30 C 0 N 0 e panTro5.chr1 101808816 54727 - 228573443 I a score=-1610.000000 s hg38.chrUn_KI270749v1 26442 75 + 158759 CCGCCATGGCTTTTTACGGCTTTTTGCCGCCGCGGTATTTTGCCCCCGCCGCCGTGGGTTTCAGTCCCCGCCGCC s gorGor5.CYUI01005671v1 17461 8 - 24701 CCGC-------------------------------------------------------------------CGCC i gorGor5.CYUI01005671v1 C 0 I 2837 e panTro5.chr1 101808816 54727 - 228573443 I a score=0.000000 s hg38.chrUn_KI270749v1 26517 37 + 158759 GCGGCTTTTGGCCCCCGCCGCCACGCTTTTGACAACG e gorGor5.CYUI01005671v1 17469 2837 - 24701 I e panTro5.chr1 101808816 54727 - 228573443 I a score=2739.000000 s hg38.chrUn_KI270749v1 26554 31 + 158759 CGGCTTTTTGCCCCCGCCGCCGAGGCTTTTT s gorGor5.CYUI01000522v1 4525 31 - 126596 CGGCTTTTTGTCCCCGCCGCTGAGGCTTTTT i gorGor5.CYUI01000522v1 n 2837 I 115 e panTro5.chr1 101808816 54727 - 228573443 I a score=0.000000 s hg38.chrUn_KI270749v1 26585 187 + 158759 GCCGCCGTGGCTTTTTACCCCAGCCGCCGCTGTTTTTTGCGACTTTTTCCCCCCGCCGCCGCGGCTTTTTGCTGCATTTTCccgccgccgccgccgctttttgccgccgccgccctcgcggcTTTTTTTGCCCCCGCTCCAGATGGTTTTTGCCCCCACCACCGCGGCTTTTTGCCCGCGCCGCCGG e gorGor5.CYUI01000522v1 4556 115 - 126596 I e panTro5.chr1 101808816 54727 - 228573443 I a score=1745.000000 s hg38.chrUn_KI270749v1 26772 50 + 158759 GGCTTTTTGCC-GCCGCGGTATTTT-GCCCCCGCCGCCGCGGCTTTTGCGGC s gorGor5.CYUI01000522v1 4671 40 - 126596 GGCTTTTTGCCCGCCGCGGCTTTTTAGCCCCCGCCGCCGC------------ i gorGor5.CYUI01000522v1 I 115 C 0 e panTro5.chr1 101808816 54727 - 228573443 I a score=180.000000 s hg38.chrUn_KI270749v1 26822 11 + 158759 TTTTTGCTCCC s nomLeu3.chrUn_GL397889_2 1842 10 + 50530 ttTTTGCCCA- i nomLeu3.chrUn_GL397889_2 N 0 C 0 e gorGor5.CYUI01000522v1 4711 0 - 126596 C e panTro5.chr1 101808816 54727 - 228573443 I a score=-520.000000 s hg38.chrUn_KI270749v1 26833 2 + 158759 CG- s ponAbe2.chrUn 66756609 2 - 72422247 CG- i ponAbe2.chrUn N 0 T 37744 s nomLeu3.chrUn_GL397889_2 1852 2 + 50530 -GG i nomLeu3.chrUn_GL397889_2 C 0 C 0 e gorGor5.CYUI01000522v1 4711 0 - 126596 C e panTro5.chr1 101808816 54727 - 228573443 I a score=7441.000000 s hg38.chrUn_KI270749v1 26835 122 + 158759 CCGCCGTGGCTTTTTGACACCGCCGCCGCGGCTTTTGCCGACAGGGCTTTTTACCCCCCGCTGCCGCGGCTTTTT-----------------------------------------------------------------------------GCCCGCGCCTCCGCGGCTTTTTGCGCCCCGCCGCTGCGACTTTTTGC s gorGor5.CYUI01000522v1 4711 155 - 126596 --------------------------------------------GGCTTTTTGTCCCCCGCTGCCGCGGCTTTTTCCCGCTGTGGCTTTTTCTCCCACCGCCGCGGCTTTTTGCCCCCACCCGCCTCGGCTTTTGCCTGCTGCGGCTTTTTAGCCCCCGCCGCCGCCGCTTTTTGTCCCCCGCCGCTGCGACTTTTTGC i gorGor5.CYUI01000522v1 C 0 I 648 s nomLeu3.chrUn_GL397889_2 1854 113 + 50530 CCTTCTCGGCATTTTGTCCCCGCCGCTGCCGCTTT---------TTCCTTTTTGCCCCCACCGCCGTGGCTTTTT-----------------------------------------------------------------------------GCCTATGCCTCGGCGGCTTTTTACACCCGGCTGCCTCGGGTTTTTGC i nomLeu3.chrUn_GL397889_2 C 0 C 0 e ponAbe2.chrUn 66756611 37744 - 72422247 T e panTro5.chr1 101808816 54727 - 228573443 I a score=-499.000000 s hg38.chrUn_KI270749v1 26957 9 + 158759 TCC--CCG-------------CCT s nomLeu3.chrUn_GL397889_2 1967 24 + 50530 TCCAGTCGCTGGGGCTTTTTCCCT i nomLeu3.chrUn_GL397889_2 C 0 C 0 e ponAbe2.chrUn 66756611 37744 - 72422247 T e gorGor5.CYUI01000522v1 4866 648 - 126596 I e panTro5.chr1 101808816 54727 - 228573443 I a score=7057.000000 s hg38.chrUn_KI270749v1 26966 34 + 158759 CCGCGGCTTTTTGCGCCCCGCCGCCGCGGTTTTT- s gorGor5.CYUI01000522v1 5514 34 - 126596 CCGCGGGTTTTTGCGCCCCGCCGCCCCGGCTTTT- i gorGor5.CYUI01000522v1 I 648 I 141 s nomLeu3.chrUn_GL397889_2 1991 35 + 50530 CCTCGGCTTTTTGCCCCCCGCCGCCGCGGCTTTTT i nomLeu3.chrUn_GL397889_2 C 0 C 0 e ponAbe2.chrUn 66756611 37744 - 72422247 T e panTro5.chr1 101808816 54727 - 228573443 I a score=8051.000000 s hg38.chrUn_KI270749v1 27000 63 + 158759 GCCAACGCGGCTTTTTAC-CCCCATCACTGCGGCTTTTTAC---------TCCCCGCTGCC----------GCGGCTTTTTGC s gorGor5.CYUI01000522v1 5689 64 - 126596 GCCGCCGCGGCGTTTTGCACCCCATCGTCGCGGCTTTTTGC---------CCTCCGCCGCC----------GCGGCTTTTTGC i gorGor5.CYUI01000522v1 I 141 I 286 s nomLeu3.chrUn_GL397889_2 2026 82 + 50530 GCCTCCTCGTTTTTTTGC-CCCGGCTGCTGTGTCTTTTTGCGGCTTTTTGTCCCCGCCGCCACTGCTCTTTGTGGCTTTTTGC i nomLeu3.chrUn_GL397889_2 C 0 C 0 e ponAbe2.chrUn 66756611 37744 - 72422247 T e panTro5.chr1 101808816 54727 - 228573443 I a score=6830.000000 s hg38.chrUn_KI270749v1 27063 38 + 158759 CCCCGCCGCCACGGCTTTTTGCTGCCGTGGCTTTTTGC- s gorGor5.CYUI01000522v1 6039 38 - 126596 CCCTGGCGCCATGGCTTTTTGTCGCCGTGGCTTTTTGC- i gorGor5.CYUI01000522v1 I 286 I 22 s nomLeu3.chrUn_GL397889_2 2108 39 + 50530 CCCCGTCGCCGAGGCTTTTTCCCGCCGCGGCTTTTTATC i nomLeu3.chrUn_GL397889_2 C 0 C 0 e ponAbe2.chrUn 66756611 37744 - 72422247 T e panTro5.chr1 101808816 54727 - 228573443 I a score=13728.000000 s hg38.chrUn_KI270749v1 27101 409 + 158759 TCCCGCCGCCGCCGGTTTTTGCCGCCGGGGC-TGTTTGCCCCCGCCATCGCGGCTTTTTGCCCCCATCGCTGCGGCTTTTTGCACCTTTTTCCCCCGCCGCCGCGGGTTTTGCCGACGCGGCTTTTTACCC---TCACTGCCACGACTTTTTGCGCCCACCGCCACGCCTTTTTTGCCCCGGCCGCCAAGGCTTTTTGCCACCGCGGCTTTTTTCCCCCCCGCCGCAGCTTTTTGTGTTTTTTTG-CCCCCGATGC-----TTTCGGCccgcgccgc----cgcggctttttgcccccgcccccgacgccgcggctttttgccgccgccgccaccgGCACGGCTTTTTGGCCGCGGCGGCTTTTGGCTCC---CCGCCACCGCGGTTTTT--------GCCAACGCGGCTTTTTACCCCCATCGCCGCGGCTTT s nomLeu3.chrUn_GL397889_2 2147 379 + 50530 CCCCGCCGCTGCCGCTTTTTCCCGCCGCAGCGTTTTTCCCCCTGCCGCCACGGCTGTTTGCCCCCGCCGCCGCCGATTTTCCCGGCTTTTTGCCCCCCTGCTGC------------CGCAGCTTTTTGTCCCCGCCGCTGCCGCAGCTTTTTGTCCCCGCCGCTTCCGCTTTT---CCCT----------GCTTTTTGTCAC------------CCCCTCCGTCGCTACTTTTCCTGGCTTTTTGTCCCCCGCAGCCGCGGTTTTTGCCCTCTCCGCTTTTCCCGGCTTTTTGC-----CCCCTGCCGCCGCGGCTTTTGGCCCCCGCCGCAGCC------GCTTTTC-------GCGGCTTTTTGTcccccgccgccgccgcggctttttgccatccgccaccgcggcttttagcccccgccgccgccgcTTT i nomLeu3.chrUn_GL397889_2 C 0 C 0 e ponAbe2.chrUn 66756611 37744 - 72422247 T e gorGor5.CYUI01000522v1 6077 22 - 126596 I e panTro5.chr1 101808816 54727 - 228573443 I a score=4843.000000 s hg38.chrUn_KI270749v1 27510 30 + 158759 TGCCGACGCGGCTTTTTACTCCCCGCCGCC s gorGor5.CYUI01000522v1 6099 30 - 126596 TGCCGCCGCGGCTTTTTGCTCCCCGACGTC i gorGor5.CYUI01000522v1 I 22 C 0 s nomLeu3.chrUn_GL397889_2 2526 29 + 50530 TTCCGCCAAGGCTTTTTGC-CCCCTCCGCC i nomLeu3.chrUn_GL397889_2 C 0 C 0 e ponAbe2.chrUn 66756611 37744 - 72422247 T e panTro5.chr1 101808816 54727 - 228573443 I a score=3949.000000 s hg38.chrUn_KI270749v1 27540 60 + 158759 GCGGCTTTTGGCCGCCGCGTCTTTTTGCCC--CCGCCGCCGCGGCTTATTGCTCCCGCCACC s nomLeu3.chrUn_GL397889_2 2555 62 + 50530 GGGGCTTTTGGCCGCCGCGGCTTTTTGCCCCACCGACGCCGCGGTTGTTTGCCCCCGCCGCC i nomLeu3.chrUn_GL397889_2 C 0 C 0 e ponAbe2.chrUn 66756611 37744 - 72422247 T e gorGor5.CYUI01000522v1 6129 0 - 126596 C e panTro5.chr1 101808816 54727 - 228573443 I a score=0.000000 s hg38.chrUn_KI270749v1 27600 246 + 158759 GCGGGTTTTTGCCGCCGAGGCTTTTTGACTCCGCCGCCGCGGATTTTTACCCCCGCAACCGTGGCTTTTTGCACCTGTCGCCGCTGCTTTTTGCAGCTTTTTCCCCCACCGCCGCGGGTTTTACGGACGCGGCTTTTTGCGCCCACCGCCGCGGCTTTTTGCTCCGTGCCGCTCGTTTTTGTCCCCGCCGCCGCGGCTTTTTCCCCCAGTCGCAGCGATTTTCTGCCCCCGCCGCCACTACTTTTT e ponAbe2.chrUn 66756611 37744 - 72422247 T e gorGor5.CYUI01000522v1 6129 0 - 126596 C e nomLeu3.chrUn_GL397889_2 2617 0 + 50530 C e panTro5.chr1 101808816 54727 - 228573443 I a score=5650.000000 s hg38.chrUn_KI270749v1 27846 107 + 158759 GCGGCTTTTTGC-CCACGCCGCCGCGGCTTTTT--CCCCCACCGCCCGAGCTTTTTGCCGCCGCGGCTTTTTGCCACCGGAGCTATCAGCCCCCGCCGCCGTGGCTTTTT s gorGor5.CYUI01000522v1 6129 94 - 126596 GCGGCTTTTTGCTCCCCGCCGCCGCGGCTTTTTGCCCCCCTCCTCCGTGGCTTTTTGCCGCCCCGGCTTTTT----------------GCCCCCGCCGCCGTGGCTTTTT i gorGor5.CYUI01000522v1 C 0 I 59 e ponAbe2.chrUn 66756611 37744 - 72422247 T e nomLeu3.chrUn_GL397889_2 2617 0 + 50530 C e panTro5.chr1 101808816 54727 - 228573443 I a score=0.000000 s hg38.chrUn_KI270749v1 27953 132 + 158759 CCCCCGATGCCGCGGCGTTTTACCCCCGCCTCCGCGGTTTTTTTGTCCCCGCCGCTGAGACTTTTTGCCGCCATGGCTTTTTCCCCCCGCCGCCACGGCtttttgtgtttttttttttttttGCCACCACTC e ponAbe2.chrUn 66756611 37744 - 72422247 T e gorGor5.CYUI01000522v1 6223 59 - 126596 I e nomLeu3.chrUn_GL397889_2 2617 0 + 50530 C e panTro5.chr1 101808816 54727 - 228573443 I a score=3839.000000 s hg38.chrUn_KI270749v1 28085 42 + 158759 CCGCTGCTTTTTGCCCCCGCCGCCGTGGCTTTTTGCCACCGC s gorGor5.CYUI01000522v1 6282 42 - 126596 CCGCCGCTTTTTGCCCCCGCCGCCGTGGCTTTTTGCCGCCGC i gorGor5.CYUI01000522v1 I 59 I 60 e ponAbe2.chrUn 66756611 37744 - 72422247 T e nomLeu3.chrUn_GL397889_2 2617 0 + 50530 C e panTro5.chr1 101808816 54727 - 228573443 I a score=0.000000 s hg38.chrUn_KI270749v1 28127 25 + 158759 CGCGGAGGATTTTTCCCCCGGTGCT e ponAbe2.chrUn 66756611 37744 - 72422247 T e gorGor5.CYUI01000522v1 6324 60 - 126596 I e nomLeu3.chrUn_GL397889_2 2617 0 + 50530 C e panTro5.chr1 101808816 54727 - 228573443 I a score=200.000000 s hg38.chrUn_KI270749v1 28152 2 + 158759 GC s nomLeu3.chrUn_GL397889_2 2617 2 + 50530 GC i nomLeu3.chrUn_GL397889_2 C 0 C 0 e ponAbe2.chrUn 66756611 37744 - 72422247 T e gorGor5.CYUI01000522v1 6324 60 - 126596 I e panTro5.chr1 101808816 54727 - 228573443 I a score=764019.000000 s hg38.chrUn_KI270749v1 28154 3239 + 158759 GGCTGTGAGGGCAGGAGCGGCAGACTCGGCTGCTAGCTCCACTGGCGTCCTGGCAAGGGCAGCGCCGAGGGGCGCTCCTGGTCCAGCTCTCCTGGCTCGGGGGTTCTTTGCCTAGGCGCCGGCGCCCCGGGCTCCCTGCCTCGGCCTCTGTGGCCTGCATAGAGCGGCGCTGCGCGCAGAGGCGATGGGAGAGAAGAAGGAGGGTGGTGGCGGGGGTGATGCGGCATTAGCGGAGGGTGGCGCAGGGGCCGCGG-------------------------GCAGCTCCAGAAGCTCATTGGCATCTTCATTGGCAGCCTTCGCTGCTGGCTGGGCACCAAGTGCGCTGTGTCGAACAACCTCACCCAGCAGAAGATAACGACCCTGGAGGTAAGGGGTTCGGGGACCGGGGCTGGGCTCCAGGAGGAGCTCAGACACCTCCCTCGGGGCCCCAGTTCACTCCTGGCCCAGTTGCATCCTTGAGCCCGCATTGCGCCCTTGGAGTCTTCCCCTCCCTCCTGCATTTGCTGATGCGGCAGCAGGAGGACCCGGGACCAGCCCTCACCTTGAGCGCGATTTGTGGGGCGGGTGCGTGGTGGGAACTGGGATGGAGGGTCCAGGGTCCTGTGGGGGGGGGGTGGTGGGCTGTGCGCGGACATCCCCTTCCACCCTGAATTTCcatctggtccagccctctcatcttgtaggtgaggaaaccgaaggcctgaggaagaactgacttgccAGGAACCCCTGTTAAGGAGAATTATCAAAGTGTGGTTATTAAAGGAGAACTGAGATGAGAGTCAGACCTGGGGGCCCACACTCTTGGTTAAGACATTATACCACCTTGAGTCTGGCCTGTTTACTGAGGGTGAGCCACTCCATCCTTGTCTGATTGTGGGGTCTTGACCTCAAGGGGTTTCCTGCAGGAAGAAGCAAATGGGTTTGCTTTCCTAGCTCTGTCCAGTATCTTAGGGACCCTGAGGACTGAAGAGATTCTTGTAGAGCCATCTGGTGTATGTCATGGGTGGGCCTTTTTTGAAGGTCAGTCTGCCCAGTGAGCTGGCTCAGCCCGAATGAACTGTCTTGAATCTTTGGAGTTGTCTGTGTACTTTTAAGGGTTTCTCATCCTTGCACCAAAAGATCCCC-TGGAAATTAGGTGGGAAAACCTTAACTTTTGTGGGGCCTTTTGTTTGTCTTAAAAGTTCATGCACATggccaggtgtggtggctcccacctcttatcctgtcctggatcccttgagtcaaagagtttgagaccaacctggacaatatagtgagaccctgtctcta--------caaaaaataaaatgttagccaggggtggttgtgcacatctgtagtcccagctactactgtggctgaggtgggaggagcacttgatcctgcactgagctgtgagctcaccagtgtactccagcctgggccacagagcaagactgtgactcaaaaaaaaaaaaaaaGACATTAAAAATTCTTGAAGATTTTGCATTCTGTCCCACTATCTATTGGTTTTCATGTCAAGATAATGTCAGAAATTCTTTACAATTGCTTCCAGAAGGAGTAGACTTTTGATCTAGTGcacaggtgtccagtcttttggcttcttagggccacattggaagaagaatgctcctgggccacacataaaatacactaatgctaacaacagctgatgagcttaaaaaaaaaaag----gtttttgcataattttcatgatacccaccaccacagataggcggaaaagtccttgtagtcaaagggttggacacggctgATCTAGTGTCTTGTCGTCCGTTTTGGCTTTCTCCCTGATTCCAGAATGCAGGTAGAGATGTAGAGACATGCTCTCAGGACAGCTGTTGAGATAAAAAAAATTCGTTGTCATTTATTCCCAATCACAGCTGTTTCTCA-TTGCATTGAAAAAGTCTCCGTTCAAACTGCTGTCACATATAAAATCTATTTATGTAAGTCTGTATTTTTCTGTTGTCTTGGCCTTTGTAGGCAGTAGTGTGTTTTAACCAAGCAAACTGTCCTTCCAAATAATGAAGCCGAAGTCAGCCTACCTGCTTGCCATTTTTCTTCCCCTTCCATTTTTGTAACCTCAGAATAATTGTAAGAATGaattaagatttgtgtttaaggccaggcacagtgtatcaggcctgtaatctcagcactttgggaggcagagacggatgtatcgcttgagctcaggagttgaagaccagcctgggcaacatactgacactccgtcttgtataatttaattaaaattt---aaaAAAAGAGAAAAAGACCTGTGTTTAAAATTTAAAAAAAGGTGGGAAGTGTAATGCAAAATGTGGACTATGCCAGCTATGATTGGGAAAACTAGTTTTTCATACAGCATTATCTGTAGACTTGTATTAGCAGCATACTGGTCATAAGCATTTTGCTTTCCTCAAATATGATGAGGTAAGCTAATTTAAAGTGTGTTGGGGCTTTCTGCCGCGTGGCTCCTGGAGGTGTTGAGTCCCAATTTAGCCAATTAATTTGGGTTTGGTTTTGATATGGATAAGGGAGACCAGCTTCATTCATGGTGTACACACAGTTTTGCCAATAAGGAGAAAAAAAAAGCCACCTGAATGTTCCTACTCA----------------GAGCTCCTACCCCACCCCCACCAAGGCCCGGGCCATTAAAAAGACTCAATGCAGCCTTTCTGTATCTCATACTGTATTCTGCAAGGTACTCCTGTGAAAGAAAGTTGTGCTGCATCAGCCATCTCCCTCCTGAAGATCCCTGCGGATGAGGATTTGTGTTTTGAAGGTTCTGAGAATTCCTGCAACAATAATTCTCAAACTTATTTGTCCAGGGGATCTTTTCTTCCACTGAATGTAGCTGGGGAGACATGGCCTTAAGCCTTGAGCAGAGAAAGAGACAA----CTGTTGGCTCACTTACAACCAAGTGTTGTGTTTATGTTTTAGGTTTTTATGAAACTGAGGTGCTGTTTGAGGTTCTAAATGAAATTGGGTGGTTGAAGAGAGGCTGGTGTCCCTGTAGACTTAGCCAGCCATGAGAAGTTGCCTTTTGTTGAAGGAGGTGTTTTACAAAGGGAAATAGGGTGTCTCCTGGGCATCGCATTAGCACTTAAATACATGTATCACTGAAatgaaatgatgaaatgatgaaatgatgacatgaaatggtgaaatgaaatgaaataatgaagtgaaatgatgaaatgaaa-----tgatgaaatgatgaaatgaaaagatgaa s gorGor5.CYUI01000522v1 6384 3253 - 126596 GGCTCTGAGGGCGGGAGCAGCAGACTCGGCTGCCACCTCTACTGGCGTCCTGACAAGGGCAGCGCCGAGGGGCTCTCCTGGTCCAGCTCTCCTGGCTCAGGGGTTCCTTGCCTAGGCGCCGGCGCCCCGGGGTCCCTGCCTAGGCCCTTGTGGCCTGCATAGAGCGGCACTACGCGCGGAGGCAATGAGAGAGAAGAAGGAGGGCGGTGGCAGGGTTGATGCGGCAGCCGCGGAGGGTGGCGCAGGGGCTGCGGCCAGCTGGGCGCTGCAGCACTGTGGGCAGCTCCAGAAGCTCATCGTCATCTTCATTGGCAGCCT---ATGCGGGCTGTGCACCAAATGCGCTGTGTCCAACGACCTCACCCAGCAGGAGATACAGACCCTGGAGGTAAGGGGTTCGGGGACCTGGGCTGGGATCCACGAGTGGCCCGGACACCTCCTTTGGGGCCCCAGTTCACTCCTGGCTGAGTTGCATCCTTGAGCCCGCATCACCCCCTTGGAGGCT-CCTCTCCCTCCTGCACTCGCTGATGTGGCAGCCGAAGGACCTGGGACCAGCCCTCACCTTGGGCAGGATTTGTGGAGCCAGTGCGTGGTAGAAACTGGGATGGAGGCTCCAGGGTCCCATGGGGGTGGGG--GTGGGCTGTGCACAAACATCCCCTTACCCCCTGAATTTCCA-ctggtccagacttctcatcttgtaggtgaggaaaccgaaggcctgagggagaactgacttgccAGGAACCCCTGTTAAGGAGAATTAACAAAGTGTGGTTATTAAAGAAGAACTGAGTTGGGAGTCAGTCCTGGAGGCCCGCACCCTTGATTAAGACATTATACCACCTTGAGTCTGGCCTGTTGACTGAGGGAGAGCCACTCCATCCTCGTCTGATTGTAGGGTCTTGAGCTCAAGGGGTTTCCTGCAGGAAGAAGCAAATGGGTTTGCTTTCCTAGCTCTGTCCAGTACCTTAGGGACCCTGAGGACTGAAGAGATTCTTGGAGAGCCATCTGGTGTATGTCATGCGTGGGCCTTGTTTGAAGGTCAGCCTGCCCAGTGGGCTGGCTCAGCCCAAATGAACTGTCTTGAAACTTTGGAGTTGTCTGTGTACTTTAAAGGGATTGTCAGCCTTGCACCAAAAGATCCCCCTGGAAATTAGGTGGGAAAACATT-----TTGTGGGGCCTTGTGTTTGTCTTAAAAGTTCATGCTCATggccaggtgtggtggctcccacctgttatcctgtcctggatcccttgagtcaaggagtttgagaccaacctggacaatataatgagaccccatctcta--------caaaaaataaaatacttgccaggggtggttgtgcacatctgtagtcccagctactactgtggctgaggcgggaagagcacttcatcctccactgagctgtgatctcaccagtgtactccagcccgggccacagagcaagaccgtgactcaaaaaaaaaaaaaa-gacaa-aAAAATTCTTGAAGATTTTGCATTCTGTCCCACTATCCATTGGTTTTCATGTCAAGATAATGTCAGAAATTCTTTACAATTGCTTCCAGAAGGAGTAGCCTTTTGATCTAGTGCAGAggtgtccagtcttttggcttctcagggccacattggaagaagaatgctcctgggccacacataaaatacactaacgctaaaaactgctgatgagcttaaaaaaaaaaag-----tttttgcatgattttcatgatacccaccaccacagatgggcggaaaagtccttgtagtcaaagggttggacacggctgATCTAGTATCTTGTTGTCCATTTTGGCTTTCTCCCTGATTCCAGAATACAGGTAGAGATGTAGAGACATGCTCTCAGGACAGCTGTTGAGATAAAAAAA-TTTGTTGTCATTTATTCCCAAGCACAGCTGTTTCTCA-TTGCATTGAAAAAGTCTCCATTCAAACTGCTGTCACATATAAAATCTATTTATGTAAGTCTGTATTTTTCTGTTGTCTTGGCCTTTGTAGGCAGTAGTGTGTTTTAAATGAGCAAACTGTCCTTCCAAATAATGAAGCTGAAGTCAGCCTATCTGCTTGCCATTTTTCTTCCCCTTCCATTTTTGTAACCTCAGAGTAATTGTAAGAATGAATTCAGATTTGTGTTTAAggccaggcacagtgtctcaggccggtaatctcagcactttgggaggcggagatggatgtatcgcttgagctcaggagttgaagactagcctgggcaacgtactgagactccatctTGTATAATTTAATTAAAATTTTAAAAAAGAAGAGAAAAAGACCTGTGTTTAAAATATAAAAAAGGGGGGAAAGTGTAATGCAAAATGTGGACTATGCCAGCTATGATTTGGAAAACCACTTTTTCATACAGCATTATCTGTAGACTTGTATTAGCAGCATACTGGTCATGAGCGTTTTGCTTTCCTCAAATATGATGAGGTAAGCTAATTTAAAGTGTGTTG--------TGCCACGTGGCTTCTGGAGGTGTTGAGTCCCAATTTAGCCAATTACTTTGGGTTTAGTTTTGATATGGATAAGGGAGAGCAGCTTCATTCGTGGTGTACACACAGTTTTGCCAATAAGGA--AAAAAAAAGCCACCTGAATGTTCCTACTCATTAG-TGCTATCTGGAAAGCTCCTACCCCACCCCCACCAAGGCCCAGGCCATTAAAAAGACTCAATGCAGCCTTTATGTATCTCATACTGTATTCTGCAAGATACTCCTGTGAAAGAAAGTTGTGCTGCATCAGCCATCTCCCTCCTGAAGATCCCTGCGGATGAGGATTTGTGTTTTGAAGGTTCTGAGAATTCCTGCAACAACAATTCTCAAACTTATTTGTCCAGGGGATCTTTTCTTCCACTGAATGTAGTTGGGGAGACACGGCTTTAAGCCTTGAGCAGAGAAAGAGACAAGAAACTGTTGGCTCACTTACAACCAAGTGCTGTGTTTATGTTTTAGGTTTTTATGAAACTGAGGTGCTGTTTGAGGTTCTAAATGAAATTGGGTGGTTGAAGAGAGGCTGGTATCCCTGTAGACTTAGCCGGCCATGAGAAGTTGCCTTTTGTTGAAGGAGGTGTTTTACAAAGGGAAATAGGGTGTCTCCTTGGCATCGCATTAGCACTTAAATACATGTATCACtgaaatgaaatga---aatgatgaaatgatgaaatgaaatgatgaaatga--tgaaat---gaaacgaaatgatgaaatgaag-----aaatgaaataatgagatgaaatgatgaa i gorGor5.CYUI01000522v1 I 60 C 0 s nomLeu3.chrUn_GL397889_2 2619 3264 + 50530 GGCTCTGAGGGCGGGAGCAGCAGACAGGGCTGCCAACTC--CCGGCGTCCTGGCTCCCGCAGCGCCAAGGGGCACTCCTGCTGCAGCTCTCCAGGCTCCCGGGTTCCTCCCCTAGGCGCCCGCGCCCCGGGCTCCCTTCCTCGGCCGCTGCTGGCAGCATAGAGCGGCGCTGTGCGCCGCGACGATGGGAG---AGAAGGAGGGCGGTGGCGCGGATGATGGAGCAGCCACGGAGGGAGGCGCAGGGGCCATGGCCAGTAGGGCGCTGCAGCAGTGTGGGCAGCTCCAGAAGCTCATCGGCATCTCCATGGGCAGCCG---GCGCGGGCTGCGCACCAAGTGCGCTGTGTCCAAGGACCTCACCCAGCAGGAGATACCGACCTTGGAGGTAAGGGGGTCGGGGACC-GGGCTGGGTTCCAGGAGCGGCCCAGACACCTCTCTCCTGGCTCCAGTTCACTCCTGGCCCAGTTGCATCCTTGAGCCCGCGTCGCCCCCTTGGAGGCT---TCTCCCTCCTGCACTCGCTGATGTGGCAGCTGGAGGACCCGGGACCAGCCCTCACCTTGGGCAGGATTTGTGGGGCGGGTGCGTGGTGGGAACTTGGATGGAGGCTCTAGGGGCCCGTGGGCGGG-----GTAGGCTGCGCGCGGACATCCCCTTACCCCCCGAATTTCcatctggtccagccttcttatcttgcaggtgaggaaacggaaggcctgagggagaactgacttgccAGGAACCCCTGTTAAGGAGAATTAACAAAGATTGGTTATTAAAGGAGCACTGAGTTGGGAGTCAGACCTGGAGGCCCACACCCTTGGTTAAGACATTATACCACCTTGAGTCTGGCCTGTTGACTGAGGGTGAGCCACTCCATCCTCACCTGATTGTGGGGTCTTGACCTCAAGGGGTTTTCTGCAGGAAGAAGCAAATGGGTTTCCTTTCCTAGCTCTGTCCAGTACCTTAGGGACCCTGAGGACTGGAGAGATTCTTGGAGAGCCATCTGGTGTATGTCATGGGTGGGCCTTTCTTGAAGGTCAGTCTGCCCAGTGGGCTGGCCCAGCCCGAATGAACTGTCTTGAATCTTTGGAGTTGTTTGTGTACTTTTAAGGGCTTCTCATCCTTGCACCAAAAGATCCCC-TGGAAATTAGGTGGGAAAACCTTAACTTTTATGGGGCCTTGTGTTTGTCTTAAAAGTTCATGCACATggccaggtgtggtggctcacacctgttatcctgtcctggatcccttgagtcaaggagtttgagaccaacctgggcaatatagtaagactccatctctacgtctctccaaaaaataacatattagccaggggtggttgtgtacatctgtagtcccagctactactgtggctgaggcgggaggagcacttgagcctgcactgagctgtgatctcatcagggtactcaaacctgggccacagagcaagaccttgactcaaaaaaaaaaaaaa-aCCAACAAAAATTCTTGAAGATTTTGCATTCTGTCCCACTATCCATTGGTTTTCATGTCAAGATAATGTCGGAAATTCTTTACAATTGGTTCCAGAAGGAGTAGTCTTTTGACCTAGTGcacaggtatccagtcttttggcttctcagggccacattggaagaagaatgctcctggaccacacataaaatacactaatgctaacgatagc---tgagcttaaaaaaaaaaaaaaaggtttgtgcataattttcatgatacccaccaccacagataggcggaaaagtccttgtagtcaaagggttggacacggctgATGTAGTGTCTTGTCGTCCGTTTTGGCTTTCTCCTTGATTCCAGAATGCAGGTAGAGGTGTAGAGAGGTGCTTTCAGGACAGCTGTTGAGATAAAAAAA-TTCGTTTTCATTTATTCCTAAGCACAGCTGTTTGTCATTTGCATTGAAAAAGTCTCCATTGAAACTGCTGTCACATATAAAATCTATTTATATAAGTTTGTATTTTTCTGTTATCTTGGCCTTTGCGGGCAGTAGTGTGTTTTAACCAAGCAAACTGTCCTTCCAAATAATGAAGCTGAAGTCAGCCTACCTGCTTGCCATTTTTCTTCCCCTTCCATTTTTCTAACCTCAGGATAATTGTAAGAATGAATTAAGGTTTGTGTTTAAggccgggcacagtgtctcaggcctgtaatcccagcactttgggaggcggagacggatgtatcgcttgagcccgggggttcaagaccagcctgggcaacatactgagactcagtctTGTAGAATTCAATTAAAATTTAAAAAAAGAAGAGAAAAAGACCTGTGTTTAAAATTTTAAAAAGGGGGGGAAGTTTAATGCAAAATGTGGACTGTGCCAGCTATGACTGGGAAAAGTAATTTTTCACACAGCATTATATGTAGACTTGTATTAGCAGCATACTGGTCATAAGCGTTTTGCTTTCCTCAAATATGATGAGGTAAGCTACTTTAAAGTGTGGTGGAGCTTTCTTCTGCGTGGCTCCTGGAGGTGTTGAGTCCCAAGTTAGCCAATTAATTTGGATTTAGTTTTGATATGGATAAGGGAGACCAGCTTCATTCATGGTGCACACACAGTTTTGCTAATAAGGA--AAAAGAAAGCAACCTGAATGTTCCTACTCATTAGATGCTATCTGGAGAGCTCCTACCTCACCCCCACCAAGCCCCGAGCTCTTCAAAAGACTCAATGCAGCCTTTCTGTATCTCATACTGTATTCTGCATGATGCTCCTGTGAAAGAAAGTTGTGCTGCATCAGCCGTCTCCCTCCTGAAGATCCCTGCGGATGAGGATTTGTGTTTTGAAGGTTCTGAGAAGTCCTGCAACAACAGTTCTCAAACGT-TTTTTTCAGGGGATCTTTTCTTCCACTGAATGTAGTTGGGGAGACACGGCCTTAAGCCTTGAATAGAGAAAGAGACAAGAAACTTTTGGCCCATTTACAACCAAGTGTTGTGTTTATGTTTTAGGTTTTTATGAAACTGAAGTGCTGTTTGAGGTTCTAAATCAAATTGGGTGTTTGAAGAGATGCTGGTATCCCTGTAGACTTAGGCAGCCATGA-AGGTTGCCTTTTGTTGAAGGAGGTGTTATACAAAGGGAAATAGGGTGTCTCCTGGGCATCACATTAGCACTTAAATACGTGTGTCACTGTAGtgaaatga---aatgatgaaatga-------aattgatgaaatta--tgaaat---gaaattaaatgatgaaatgaaatgaattgataaaatgatgaaatgaagacatgaa i nomLeu3.chrUn_GL397889_2 C 0 M 2506 e ponAbe2.chrUn 66756611 37744 - 72422247 T e panTro5.chr1 101808816 54727 - 228573443 I a score=29103.000000 s hg38.chrUn_KI270749v1 31393 586 + 158759 atgatgaattgaggaaatgatatgaaatgatgaaatgaaatgatgaaatgaaaaggtgtaatgaaacgaaatgattaaatgaaatgagattaaaagatgaaatgatgagatgaaatga---aatcatgagatgaaatgatgagatgaagtgaaatgatgaaatgtaatgaaatgatgaaatggaatgatgaaatggtgaaatgaaatgaaaagatgaaataatgaattgaggaaatgatatgaaatgaaatgaaatgatgaaatgaaatgaaaaggtataatgaaacaaaatgattaaatgaaatgag---attaaaagatgaaatgatgagatgaaatgaaatcatgagatgaaatgatgagatgaagtgaaatgatgaaatgtaatgaaatgatgaaatggaatgatgaaataaaatgatgaaatggtgaaatgaaatgaggaaatgaaatgatgaaatgaaatgatgaagtgaaatga---aatgagaagatcaaatggtgaaatgaagaaatgatatgaaatgatgaaatgatgaattgaagttaaatgattaaatgatgaaataatgaaatgaaatgatgaaatgacgaa s gorGor5.CYUI01000522v1 9637 520 - 126596 aggatgaa--------atgaaatgaaatgatgaaatggaatgatgaaatgatgaaatg--atgacatgaaatggtgaaatgaaatgaaataatgaagtgaaatgatgaaatgaaatgatgaaatgatgaaatgaaaagatgaaatga--tgaattgaggaaatgatatgaaatgatgaaatgaaatgatgaaatgatgaaac--aatgaaa---ttaaatgatgaattga---------------tgaaatgaaatgatgagatgaaa-----aggtgaaatgaagcgaaatgattaaatgaaatgaggagatgaaaagatgaaatgatgagatgaaatgaaatgatgagatgaaatgatgagatgaaatgaaatgatgcaatgaaa------gatgaaatgataagatgaagtgaaatgatgaaatgatgaaatgtaatga--------aatgatgaaatggaatgatgaaatgaaatgatgaaatgaaagggtgaaatg---aaatgaggaaatgaaatgaaatgatgaaatga-------------aatgataag----tgaaatgatgaaatgaaatgatgaaatga---- i gorGor5.CYUI01000522v1 C 0 C 0 e ponAbe2.chrUn 66756611 37744 - 72422247 T e nomLeu3.chrUn_GL397889_2 5883 2506 + 50530 M e panTro5.chr1 101808816 54727 - 228573443 I a score=282.000000 s hg38.chrUn_KI270749v1 31979 3 + 158759 ttg s ponAbe2.chrUn 66718867 3 - 72422247 ttg i ponAbe2.chrUn T 37744 I 76 e gorGor5.CYUI01000522v1 10157 0 - 126596 C e nomLeu3.chrUn_GL397889_2 5883 2506 + 50530 M e panTro5.chr1 101808816 54727 - 228573443 I a score=2102.000000 s hg38.chrUn_KI270749v1 31982 92 + 158759 atgaaatgaaatgatcaaatgaaatgacgagatgaaaagatgaaatgatgaaatgaaatgagatgaaaagatgaaatgagatgatgagatga s gorGor5.CYUI01000522v1 10157 57 - 126596 -tgaaatgaaatga---aatgaaatga--------aaagatcaaatggtgaaatgaa-------gaaacgat----------------atga i gorGor5.CYUI01000522v1 C 0 C 0 e ponAbe2.chrUn 66718870 76 - 72422247 I e nomLeu3.chrUn_GL397889_2 5883 2506 + 50530 M e panTro5.chr1 101808816 54727 - 228573443 I a score=819.000000 s hg38.chrUn_KI270749v1 32074 3 + 158759 aat s gorGor5.CYUI01000522v1 10214 3 - 126596 aat i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66718946 3 - 72422247 aat i ponAbe2.chrUn I 76 I 10 e nomLeu3.chrUn_GL397889_2 5883 2506 + 50530 M e panTro5.chr1 101808816 54727 - 228573443 I a score=772.000000 s hg38.chrUn_KI270749v1 32077 12 + 158759 catgagatgaaa s gorGor5.CYUI01000522v1 10217 12 - 126596 gatgaaatgaaa i gorGor5.CYUI01000522v1 C 0 C 0 e ponAbe2.chrUn 66718949 10 - 72422247 I e nomLeu3.chrUn_GL397889_2 5883 2506 + 50530 M e panTro5.chr1 101808816 54727 - 228573443 I a score=1419.000000 s hg38.chrUn_KI270749v1 32089 5 + 158759 tgatg s gorGor5.CYUI01000522v1 10229 5 - 126596 tgatg i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66718959 5 - 72422247 tgatg i ponAbe2.chrUn I 10 I 304 e nomLeu3.chrUn_GL397889_2 5883 2506 + 50530 M e panTro5.chr1 101808816 54727 - 228573443 I a score=26727.000000 s hg38.chrUn_KI270749v1 32094 390 + 158759 agatgaagtgaaatgatgaaatgatgaaatgacgaaatgcaacaatgagaagaaatgctgaaatga---aataatgaaatgaaacgatgaaatgatgagatggaatgatgaaaggatgaaatgaaatgatgaaatgaggaaatgaaatgatgaaatgaaatgaag-----------tgaaatgatggaatgaaaagatgaaatgatgaaatgatatgaaatgatgaaatgatgacatgacgtcaaatgatgaaatgatgaaat--------------gatgaaataaat------gaaatgatgaaatga---------------tgagatgaaatgaaatcatgagatgaaatgatgaaatgagatgaagtgaaatgacgaaatgaaatgttgagatgaagtgatgaaatgaaatgatgaaatgaaa-----caatgaaatga s gorGor5.CYUI01000522v1 10234 433 - 126596 aaatgaagtgaaatgattaaatgatgaaataatgaaatg--------agatggaatgatgaaatgatgaattgatgaaatgaaatgatgaaatga---aatgacaagatgaaaggatgaaatgaaatgatgaaatgaggaaatgaaatgatgaaatgaaatgatgaagtgaaatgatgaaatgatggaatgaaaagatgaaatgatgaaatgatacgaaataatgatatgatgacatggagtcaaatgatgaaatgatgaaataaatgaaatgaaatgatgaaatgaattgagatgaaatgatgaaatgaaaagatgaaatgaaatgagatgaaatgaaatcatgagatgaaatgatgaaatgagatgaaatgaaatgacgaaatgaaatgttgagatgaagtgatgaaatgaaatgatgaaatgaaatgaaacaatgaaatga i gorGor5.CYUI01000522v1 C 0 C 0 e ponAbe2.chrUn 66718964 304 - 72422247 I e nomLeu3.chrUn_GL397889_2 5883 2506 + 50530 M e panTro5.chr1 101808816 54727 - 228573443 I a score=1703.000000 s hg38.chrUn_KI270749v1 32484 7 + 158759 agtgaaa s gorGor5.CYUI01000522v1 10667 7 - 126596 agtgaaa i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66719268 7 - 72422247 aatgaaa i ponAbe2.chrUn I 304 I 52 e nomLeu3.chrUn_GL397889_2 5883 2506 + 50530 M e panTro5.chr1 101808816 54727 - 228573443 I a score=3787.000000 s hg38.chrUn_KI270749v1 32491 59 + 158759 ------tgagatgaaatgatgaattgatgaaatgagatgaaaagatgaaatgatgaaatgaaatg s gorGor5.CYUI01000522v1 10674 61 - 126596 atgaaatgagatgaaatgatgaattgataaaatgaaatga---gatgaaa-gatgaaatgaaatg i gorGor5.CYUI01000522v1 C 0 C 0 e ponAbe2.chrUn 66719275 52 - 72422247 I e nomLeu3.chrUn_GL397889_2 5883 2506 + 50530 M e panTro5.chr1 101808816 54727 - 228573443 I a score=1194.000000 s hg38.chrUn_KI270749v1 32550 9 + 158759 atgagatga s gorGor5.CYUI01000522v1 10735 9 - 126596 attagatga i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chrUn_GL397889_2 8398 9 + 50530 ATGTGGTGG i nomLeu3.chrUn_GL397889_2 M 2506 C 0 e ponAbe2.chrUn 66719275 52 - 72422247 I e panTro5.chr1 101808816 54727 - 228573443 I a score=655.000000 s hg38.chrUn_KI270749v1 32559 18 + 158759 aataaaatcatgagatga s gorGor5.CYUI01000522v1 10744 18 - 126596 aatgaaatgatgagatga i gorGor5.CYUI01000522v1 C 0 I 5 s ponAbe2.chrUn 66719327 5 - 72422247 ----aaagg--------- i ponAbe2.chrUn I 52 I 135 s nomLeu3.chrUn_GL397889_2 8407 14 + 50530 ----AATTCATGAAATGA i nomLeu3.chrUn_GL397889_2 C 0 C 0 e panTro5.chr1 101808816 54727 - 228573443 I a score=28095.000000 s hg38.chrUn_KI270749v1 32577 145 + 158759 tgaaatgatgagatgaagtgaaatgatgaaatgaaatgaaatattgagatgaaatgatgaaatgaaatgaaagaatgagatgaaatgataaaatga--------gatgaaatgacgagatgaaatgatgaaatgaaaggatgaaatgaaagga s gorGor5.CYUI01000522v1 10767 133 - 126596 tgaaatgatgagatgaaatgaaatgatgaaatgaaatg-----ttgatatgaaatgatgaaatgaaa-----gaatgaaatgaaatgataaaatga-----tgagatgaaatgatgaggtgaaatgatgaaatga-----tgaaatgaaagga i gorGor5.CYUI01000522v1 I 5 C 0 s nomLeu3.chrUn_GL397889_2 8421 153 + 50530 TGAAATGATGAGATGAAGTAAAATGATGAAATAAAATGAGATGTTGAGatgaaatgatgaaatgaaatgaggaaatgaaattaaagaatgaaatgaaatgatgaaatgaaatgatgagatgaaatgatgaggtgaaaggatgagatgaaagga i nomLeu3.chrUn_GL397889_2 C 0 C 0 e ponAbe2.chrUn 66719332 135 - 72422247 I e panTro5.chr1 101808816 54727 - 228573443 I a score=684.000000 s hg38.chrUn_KI270749v1 32722 3 + 158759 tga s gorGor5.CYUI01000522v1 10900 3 - 126596 tga i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66719467 3 - 72422247 tta i ponAbe2.chrUn I 135 I 356 s nomLeu3.chrUn_GL397889_2 8574 3 + 50530 cga i nomLeu3.chrUn_GL397889_2 C 0 C 0 e panTro5.chr1 101808816 54727 - 228573443 I a score=11211.000000 s hg38.chrUn_KI270749v1 32725 71 + 158759 aatgaaatgatgaaatgagatgaaatgaggaaatgaaatgatgaaatgaaatgaaat--aatgaaatga-----tgaa s gorGor5.CYUI01000522v1 10903 70 - 126596 aatgaaatgatgaaaggaga---aatga---aatgaaatgatgaaatgaaatgaaat--aatgaaatgaaatgatgaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chrUn_GL397889_2 8577 68 + 50530 aatgaaaggatgtaatgaaatgaaatga-----tgaaatgaggaaatgaaaggaaatgaaatgaaatga-----tgaa i nomLeu3.chrUn_GL397889_2 C 0 N 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e panTro5.chr1 101808816 54727 - 228573443 I a score=5845.000000 s hg38.chrUn_KI270749v1 32796 7 + 158759 atagatg s gorGor5.CYUI01000522v1 10973 7 - 126596 atagatg i gorGor5.CYUI01000522v1 C 0 I 4 s nomLeu3.chr17 55735220 7 + 99891981 ATGGATG i nomLeu3.chr17 N 0 I 4 s macFas5.chr3 67265343 7 + 192294377 ATGGATG i macFas5.chr3 N 0 I 4 s saiBol1.JH378145 696565 7 - 18371965 ATGGATG i saiBol1.JH378145 N 0 I 4 e ponAbe2.chrUn 66719470 356 - 72422247 I e panTro5.chr1 101808816 54727 - 228573443 I a score=9771.000000 s hg38.chrUn_KI270749v1 32803 7 + 158759 aaaAATA s panPan2.chr7 108488384 7 - 162613886 AAAAATA i panPan2.chr7 N 0 C 0 s gorGor5.CYUI01000522v1 10984 7 - 126596 AAAAATA i gorGor5.CYUI01000522v1 I 4 C 0 s nomLeu3.chr17 55735231 7 + 99891981 AAAAATA i nomLeu3.chr17 I 4 C 0 s macFas5.chr3 67265354 7 + 192294377 AAGGATG i macFas5.chr3 I 4 C 0 s calJac3.chr8 108074459 7 - 128169293 AAAGATG i calJac3.chr8 N 0 C 0 s saiBol1.JH378145 696576 7 - 18371965 AAAGATG i saiBol1.JH378145 I 4 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e panTro5.chr1 101808816 54727 - 228573443 I a score=12690.000000 s hg38.chrUn_KI270749v1 32810 3 + 158759 CTT s panPan2.chr7 108488391 3 - 162613886 CTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 10991 3 - 126596 CTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735238 3 + 99891981 CTT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67265361 3 + 192294377 CTT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2467711 3 + 10077455 CTT i cerAty1.NW_012000909v1 N 0 C 0 s chlSab2.chr21 5675674 3 + 127223203 CTT i chlSab2.chr21 N 0 C 0 s colAng1.NW_012115910v1 1718577 3 + 6934359 CTT i colAng1.NW_012115910v1 N 0 C 0 s calJac3.chr8 108074466 3 - 128169293 CTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696583 3 - 18371965 CTT i saiBol1.JH378145 C 0 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e panTro5.chr1 101808816 54727 - 228573443 I a score=13401.000000 s hg38.chrUn_KI270749v1 32813 4 + 158759 ATCC s panPan2.chr7 108488394 4 - 162613886 ATTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 10994 4 - 126596 ATTC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735241 4 + 99891981 ATTC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67265364 4 + 192294377 ATTA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2467714 4 + 10077455 ATTC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5675677 4 + 127223203 ATTC i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 1718580 4 + 6934359 ATTC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074469 4 - 128169293 ATTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696586 4 - 18371965 ATTA i saiBol1.JH378145 C 0 C 0 s canFam3.chr18 51725532 4 - 55844845 ATCC i canFam3.chr18 N 0 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e panTro5.chr1 101808816 54727 - 228573443 I a score=-55.000000 s hg38.chrUn_KI270749v1 32817 1 + 158759 -A s panPan2.chr7 108488398 1 - 162613886 -A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 10998 1 - 126596 -A i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735245 1 + 99891981 -A i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133435742 1 - 185818997 -A i rheMac8.chr3 N 0 C 0 s macFas5.chr3 67265368 1 + 192294377 -A i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2467718 1 + 10077455 -A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5675681 1 + 127223203 -A i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 1718584 1 + 6934359 -A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074473 1 - 128169293 -A i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696590 1 - 18371965 -A i saiBol1.JH378145 C 0 C 0 s canFam3.chr18 51725536 1 - 55844845 T- i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e panTro5.chr1 101808816 54727 - 228573443 I a score=5005.000000 s hg38.chrUn_KI270749v1 32818 1 + 158759 T s panPan2.chr7 108488399 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 10999 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735246 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133435743 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265369 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2747422 1 + 3123512 T i macNem1.NW_012011522v1 N 0 C 0 s cerAty1.NW_012000909v1 2467719 1 + 10077455 T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5675682 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 1718585 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 51725537 1 - 55844845 T i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e saiBol1.JH378145 696591 0 - 18371965 C e calJac3.chr8 108074474 0 - 128169293 C e panTro5.chr1 101808816 54727 - 228573443 I a score=679604.000000 s hg38.chrUn_KI270749v1 32819 92 + 158759 --TTTTTTTCTTGGCATCCTTCTAAGAGTATTTTAGTGTGGTTAATTTCTAAAAATAAATTGCTATTCAATGGCTATAcagttggcctttg----ctc s panPan2.chr7 108488400 91 - 162613886 --TTTTTT-CTTGGCATCCTTCTAAGAGTATTTTAGTGAGGTTAATTTCTAAAAATAAATTGCTGTTCAATGGATATAcagttggccgttg----cac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11000 91 - 126596 --TTTTTT-CTTGGCATCCTTCTAAGAGTATTTTAGTGAGGTTAATTTCTAAAAATAAATTGCTATTCAATGGCTATAcagttggcctttg----cac i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735247 92 + 99891981 --TTTTTGTCTTGGCATCCTTCTAAGAGTATTTTAGTGAGGTTAATTTCTAAAAATAAATTGCTATTCAATGGCTATAcagttggcctttg----cac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133435744 92 - 185818997 --TTTTTTTCTTGGCATCCTTCTAAGAATATTTTAGTTAGACTAATTTCTAAAAACAAATTGCTATTCAATGGCTATAcagttggcctttg----cac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265370 92 + 192294377 --TTTTTTTCTTGGCATCCTTCTAAGAATATTTTAGTTAGACTAATTTCTAAAAACAAATTGCTATTCAATGGCTATAcagttggcctttg----cac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2747423 92 + 3123512 --TTTTTTTCTTGGCATCCTTCTAAGAATATTTTAGTTAGACTAATTTCTAAAAACAAATTGCTATTCAATGGCTATAcagttggcctttg----cac i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2467720 92 + 10077455 --TTTTTTTCTTGGCATCCTTCTAAGAATATTTTAGTTAGACTCATTTCTAAAAATAAATTGCTATTCAATGGCTATAcagttggcctttg----cac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5675683 92 + 127223203 --TTTTTTTCTTGGCATCCTTCTAAGAATATTTTAGTTAGACTCATTTCTAAAAATAAATTGCTATTCAATGGCTATAcagttggccgttg----cac i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 1718586 96 + 6934359 --TTTTTTTCTTGGCATCCTTCTAAGAGTATTTTAGTTAGACTAATTTCTAAAAATAAATTGCTATTCCATGGCTATAcagttggccttcaaacctac i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074474 84 - 128169293 --TTTTTTTCTTGGCATCCTTCTAAGACTATTTTAGTAAAATTAATT--------TCAATTGCTGTTCAATGGTTATGcagttgatccttg----gac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696591 92 - 18371965 --TTTTTTTCTTGGCATCCTTCTAAGAGTATTTTAGGAAGATTAATTTCTAAAACTCAATTGCTGTTCAATGGTTATGcagttaacccttg----cac i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1355493 92 + 3566421 --TTTTTTTCTTGGCATCCTTCTAAGAGTATTTTAGTAATATTAATTTCTAAAAATCAATTGCTGTTCAGTGGATATGcagttaacccttg----cac i cebCap1.NW_016107540v1 N 0 C 0 s aotNan1.NW_018514471v1 1861930 92 - 9267652 --TTTTTTTCTTGGCATCCTTCTAAGAGTATTTTAGTAAGATTAATTTCTAAAAATCAATTGCCATTCAATGGTTATGcaggtaacccttg----cac i aotNan1.NW_018514471v1 N 0 C 0 s canFam3.chr18 51725538 94 - 55844845 TTTTTTCCCCTTGGCATATTTGTAAGAGTATTTCTGCAAGATTAATTGCTAGAAATAAATTGCCGTTTAATGGATATAGATGCTATCTCTA----TTC i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e panTro5.chr1 101808816 54727 - 228573443 I a score=223939.000000 s hg38.chrUn_KI270749v1 32911 33 + 158759 cacaggggtttgaactgtgcacgtccacttagc s panPan2.chr7 108488491 33 - 162613886 aacaggggtttgaactgtgcaggtccacttagc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11091 33 - 126596 cacaggggtttgaactgttcacgtccacttagc i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735339 33 + 99891981 aacaggggtttgaactgtgcagatccacttagc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133435836 33 - 185818997 aacaggggtttgaactgtgcaggtccacttagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265462 33 + 192294377 aacaggggtttgaactgtgcaggtccacttagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2747515 33 + 3123512 aacaggggtttgaactgtgcaggtccacttagc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2467812 33 + 10077455 aacaggggtttgaactgtgcaggtccacttagc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5675775 33 + 127223203 aacaggggtttgaactgtgcaggtccacttagc i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 1718682 33 + 6934359 aacaggggtttgaattgtgcaggtccacttagc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074558 33 - 128169293 agcagaggttggaactttgccggtccagttagc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696683 33 - 18371965 aacagaggttggaattttacctgtccacttagc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1355585 33 + 3566421 aacagaggttggaactttgctgctccacttaac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862022 33 - 9267652 aacagagatttgaactttgccggtccgcttagc i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e canFam3.chr18 51725632 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=13255.000000 s hg38.chrUn_KI270749v1 32944 3 + 158759 -aaa s panPan2.chr7 108488524 3 - 162613886 -aaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11124 3 - 126596 -aaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735372 3 + 99891981 -aaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133435869 3 - 185818997 -aaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265495 3 + 192294377 -aaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2747548 3 + 3123512 -aaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2467845 3 + 10077455 -aaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5675808 3 + 127223203 -aaa i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 1718715 3 + 6934359 -aaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074591 3 - 128169293 -aag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696716 3 - 18371965 -aag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1355618 3 + 3566421 -aag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862055 3 - 9267652 -aag i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 981296 3 - 1121937 CAC- i tarSyr2.KE946558v1 N 0 I 127 e ponAbe2.chrUn 66719470 356 - 72422247 I e canFam3.chr18 51725632 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=56151.000000 s hg38.chrUn_KI270749v1 32947 9 + 158759 accaacaat s panPan2.chr7 108488527 9 - 162613886 accaacaat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11127 9 - 126596 accaacaat i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735375 9 + 99891981 accaacaat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133435872 9 - 185818997 accaacaat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265498 9 + 192294377 accaacaat i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2747551 9 + 3123512 accaacaat i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2467848 9 + 10077455 accaacaat i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5675811 9 + 127223203 agcaacaat i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 1718718 9 + 6934359 accaacaat i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074594 1 - 128169293 a-------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696719 9 - 18371965 accaacaat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1355621 9 + 3566421 accaacaat i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862058 9 - 9267652 accaacaat i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e tarSyr2.KE946558v1 981299 127 - 1121937 I e canFam3.chr18 51725632 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=231464.000000 s hg38.chrUn_KI270749v1 32956 34 + 158759 tctacatccttatccacaccctgcccatgaaaag s panPan2.chr7 108488536 33 - 162613886 tctatatctttctccacaccctgcccatgaaa-g i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11136 34 - 126596 tctacatccttatccacaccctgcccatgaaaag i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735384 34 + 99891981 tctacatccttctccacatcctgcccatgaaaag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133435881 32 - 185818997 tctacatccttctccacaccctgcccatgaaa-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265507 34 + 192294377 tctacatccttctccacaccctgcccatgaaaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2747560 34 + 3123512 tctacatccttctccacaccctgcccatgaaaag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2467857 34 + 10077455 tctacatccttctccacaccctgcccatgaaaag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5675820 34 + 127223203 tctacatccttctccacaccctgcccatgaaaag i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 1718727 34 + 6934359 tctacatccttctccacactctgcccatgaaaag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074595 33 - 128169293 -ctacctccttctcctcaccctgctcatgaagta i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696728 34 - 18371965 tctacctccttctcctcaccctgctcttgaagcg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1355630 34 + 3566421 tctaccctcttctcctcaccctgctcatgaagcg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862067 34 - 9267652 tctacctccttctcctcaccctgctcatgaagca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12688988 33 + 14340318 tctatcttctcctcctctaccttttcaaaagaa- i otoGar3.GL873564 N 0 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e tarSyr2.KE946558v1 981299 127 - 1121937 I e canFam3.chr18 51725632 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=647161.000000 s hg38.chrUn_KI270749v1 32990 75 + 158759 gatgaggatgaagacctgtttgatcatctacttccatttaataattagtaaatatatttt-----ccttatgattttc------tt s panPan2.chr7 108488569 75 - 162613886 gatgagtatgaagacctttttgatcatttacttccatttaataactagtaaatacatttt-----ccttatgattttc------tt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11170 75 - 126596 gatgaggatgaagacctgtttgatcatctacttccatttaataactagtacatatatttt-----ccttatgattttc------tt i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735418 74 + 99891981 gatgaggatgaagactt-tttgatcatctacttgcatttaataactaggaaatatatttt-----ccttatgatttta------tt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133435913 74 - 185818997 -atgaggatgaagacctttttgatgatctacttccatctaataactagtgaatatatttt-----ccttatgattttc------tt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265541 75 + 192294377 gatgagtatgaagacctttttgatgatctacttccatctaataactagtgaatatatttt-----ccttatgattttc------tt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2747594 75 + 3123512 gatgaggatgaagacctttttgatgatctacttccatctaataactagtgaatatatttt-----ccttatgattttc------tt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2467891 75 + 10077455 gatgaggatgaagaccttcttgatgatctacttccatctaataactagtgaatatatttt-----ccttatgattttc------tt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5675854 75 + 127223203 gatgaggatgaagacctttttgatgatctacttccatctaataactagtgaacatatttt-----ccttatgattttc------tt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1120122 75 - 1799296 gatgaggctgaagacctttttgatgatctacttccatctaataactagtgaatatatttt-----ccttatgattttc------tt i manLeu1.NW_012105809v1 N 0 C 0 s colAng1.NW_012115910v1 1718761 75 + 6934359 gatgaggatgaagacttttttgatgatctacttccatctaataactagtgaatatatttt-----ccttatgattttc------tt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074628 79 - 128169293 gatgaggctgaagacctttatgatgatctacttccatttaataactagtaaatatatttt-----tcttatgatttttttac--tt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696762 79 - 18371965 gctgaggctgaagaccttcatgatgatctacttccatttaactactagtaaatatatttt-----ccttatgattttcttac--tt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1355664 81 + 3566421 gatgaggctgaagacctttatgatgatctacttccatttaataagtagtaaacatatttt-----tcttatgattttcttactttt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862101 79 - 9267652 gataggactgaagacctttaccatgatctatttccatttaataactagtaaatatatttt-----tcttatgattttcttac--tt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12689021 80 + 14340318 aaggaggatgaagacttttatgatgatccacttccactcaaagaataataaatccattttctataccttatgatttta------ct i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e tarSyr2.KE946558v1 981299 127 - 1121937 I e canFam3.chr18 51725632 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=12376.000000 s hg38.chrUn_KI270749v1 33065 1 + 158759 t s panPan2.chr7 108488644 1 - 162613886 t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11245 1 - 126596 t i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735492 1 + 99891981 t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133435987 1 - 185818997 t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265616 1 + 192294377 t i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2747669 1 + 3123512 t i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2467966 1 + 10077455 t i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5675929 1 + 127223203 t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1120197 1 - 1799296 t i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1718836 1 + 6934359 t i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074707 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696841 1 - 18371965 t i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1355745 1 + 3566421 t i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862180 1 - 9267652 t i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 981426 1 - 1121937 t i tarSyr2.KE946558v1 I 127 I 21 s otoGar3.GL873564 12689101 1 + 14340318 t i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e canFam3.chr18 51725632 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=140853.000000 s hg38.chrUn_KI270749v1 33066 20 + 158759 ------tttcttttctctggcatgtt s panPan2.chr7 108488645 19 - 162613886 ------tt-cttttctctggcatgtt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11246 20 - 126596 ------tttcttttctctggcatgtt i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735493 19 + 99891981 ------tt-cttttctctggcatgtt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133435988 19 - 185818997 ------tt-cttttctctggcttatt i rheMac8.chr3 C 0 I 4 s macFas5.chr3 67265617 19 + 192294377 ------tt-cttttctctggcttatt i macFas5.chr3 C 0 I 4 s macNem1.NW_012011522v1 2747670 19 + 3123512 ------tt-cttttctctggcttatt i macNem1.NW_012011522v1 C 0 I 4 s cerAty1.NW_012000909v1 2467967 19 + 10077455 ------tt-cttttctctggcttatt i cerAty1.NW_012000909v1 C 0 I 4 s chlSab2.chr21 5675930 19 + 127223203 ------tt-cttttctctggcttatt i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012105809v1 1120198 19 - 1799296 ------tt-cttttctctggcttatt i manLeu1.NW_012105809v1 C 0 I 4 s colAng1.NW_012115910v1 1718837 19 + 6934359 ------tt-cttttctctggcttatt i colAng1.NW_012115910v1 C 0 I 4 s calJac3.chr8 108074708 19 - 128169293 ------tt-cttttctctgagatatt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696842 19 - 18371965 ------tt-cttttgtctgatttatt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1355746 19 + 3566421 ------tt-cttttctctgacttatt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862181 15 - 9267652 ------tt-cttttctctgac----t i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12689102 25 + 14340318 tacatttg-ctttgttctagtctact i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 66719470 356 - 72422247 I e tarSyr2.KE946558v1 981427 21 - 1121937 I e canFam3.chr18 51725632 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=14363.000000 s hg38.chrUn_KI270749v1 33086 3 + 158759 ----tgt s panPan2.chr7 108488664 3 - 162613886 ----tgt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11266 3 - 126596 ----tgt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66719826 3 - 72422247 ----tgt i ponAbe2.chrUn I 356 C 0 s nomLeu3.chr17 55735512 1 + 99891981 ------t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436011 3 - 185818997 ----tgt i rheMac8.chr3 I 4 C 0 s macFas5.chr3 67265640 3 + 192294377 ----tgt i macFas5.chr3 I 4 C 0 s macNem1.NW_012011522v1 2747693 3 + 3123512 ----tgt i macNem1.NW_012011522v1 I 4 C 0 s cerAty1.NW_012000909v1 2467990 3 + 10077455 ----tgt i cerAty1.NW_012000909v1 I 4 C 0 s chlSab2.chr21 5675953 3 + 127223203 ----tgt i chlSab2.chr21 I 4 C 0 s manLeu1.NW_012105809v1 1120221 3 - 1799296 ----tgt i manLeu1.NW_012105809v1 I 4 C 0 s colAng1.NW_012115910v1 1718860 3 + 6934359 ----tgt i colAng1.NW_012115910v1 I 4 C 0 s calJac3.chr8 108074727 3 - 128169293 ----tgt i calJac3.chr8 C 0 I 4 s saiBol1.JH378145 696861 3 - 18371965 ----tgt i saiBol1.JH378145 C 0 I 4 s cebCap1.NW_016107540v1 1355765 3 + 3566421 ----tag i cebCap1.NW_016107540v1 C 0 I 4 s aotNan1.NW_018514471v1 1862196 3 - 9267652 ----tgt i aotNan1.NW_018514471v1 C 0 I 4 s tarSyr2.KE946558v1 981448 3 - 1121937 ----tat i tarSyr2.KE946558v1 I 21 I 916 s otoGar3.GL873564 12689127 6 + 14340318 ttactg- i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51725632 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=546.000000 s hg38.chrUn_KI270749v1 33089 1 + 158759 t s gorGor5.CYUI01000522v1 11269 1 - 126596 t i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66719829 1 - 72422247 t i ponAbe2.chrUn C 0 I 1607 s otoGar3.GL873564 12689133 1 + 14340318 t i otoGar3.GL873564 C 0 C 0 e tarSyr2.KE946558v1 981451 916 - 1121937 I e manLeu1.NW_012105809v1 1120224 0 - 1799296 C e macNem1.NW_012011522v1 2747696 0 + 3123512 C e rheMac8.chr3 133436014 0 - 185818997 C e aotNan1.NW_018514471v1 1862199 4 - 9267652 I e cebCap1.NW_016107540v1 1355768 4 + 3566421 I e canFam3.chr18 51725632 0 - 55844845 C e saiBol1.JH378145 696864 4 - 18371965 I e calJac3.chr8 108074730 4 - 128169293 I e colAng1.NW_012115910v1 1718863 0 + 6934359 C e chlSab2.chr21 5675956 0 + 127223203 C e cerAty1.NW_012000909v1 2467993 0 + 10077455 C e macFas5.chr3 67265643 0 + 192294377 C e nomLeu3.chr17 55735513 0 + 99891981 C e panPan2.chr7 108488667 0 - 162613886 C e panTro5.chr1 101808816 54727 - 228573443 I a score=892900.000000 s hg38.chrUn_KI270749v1 33090 107 + 158759 aagaatacagtatataagacatataac--atattaaatatgggttaattgactg------ttatttgtaaggctt-------agagtagtctattagtagttaagttttgggggagtcaaag s panPan2.chr7 108488667 113 - 162613886 aagaatacagtatataagatatataac--atattaaatatgtgttaattgactgcttgtgttatttgtaaggctt-------acagtaggctattaatagttaagttttgggggagtcaaag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11270 109 - 126596 aagaatacagtatataagacatataac--atattaaatatgtgttaattgactg----tgttatttgtaagtctt-------acagtaggctattagtagttaagttttgggggagtcaaag i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735513 113 + 99891981 aagaatacagtatataagagatatagc--atattaaatatgtgttaattgactgcttgtgttatttgtaaggctt-------ccagtaggctattaatagttaagttttgggggagtcaaag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436014 115 - 185818997 aagaatacagtatataagacatataactcatattaaatgtgtgttaattgactgcttgtgtgatttgcaaggctt-------acagtgggctcttggtagttacattttggaggagtcaaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265643 115 + 192294377 aagaatacagtatataagacatataactcatattaaatgtgtgttaattgactgcgtgtgttatttgcaaggctt-------acagtgggctattggtagttacattttggaggagtcaaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2747696 115 + 3123512 aagaatacagtatataagacatataactcatattaaatgtgtgttaattgactgcttgtgttatttacaaggctt-------acagtgggctatttgtagttacattttggaggagtcaaag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2467993 115 + 10077455 aagaatacagtacataagacatataactcatattaaatatgtgttaattgactgcttgtgttatttgtaaggctt-------acagtgggctattggtagttacattttggaggagtcaaag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5675956 115 + 127223203 aagaatacagtacataagacatataactcatattaaatatgtgttcattgactgcttgtgttatttgtaaggctt-------acagtgggctatcggtagttacattttggaagagtcaaag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1120224 115 - 1799296 aagaatacagtatataagacatataacttacattaaaagtgtgttaattgactgcttgtgttatttgcaaggctt-------acagtgggctattggtagttacattttggaggagtcaaag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1718863 115 + 6934359 aagaatacagtatgtaacacatataactcatattaaatatgtgttaattgactgcttgtgttatttgtaaggctt-------acagtgggctattggtagttacattttggaggagtcaaag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074734 113 - 128169293 aagaatacagtataggatacatatagc--gtattaaatatgtgctaattgactgcctatgttatttgtaaggctt-------acagtaggctgttagtagttaagttttgtgcgagtggaag i calJac3.chr8 I 4 C 0 s saiBol1.JH378145 696868 113 - 18371965 aagaataccgtataggatacatatagc--atattaaatatgtgctaattgactgcctatgtgatttgtaaggctt-------acagtaggctattaatagttaagttttgtgggagtgaaag i saiBol1.JH378145 I 4 C 0 s cebCap1.NW_016107540v1 1355772 113 + 3566421 aagaatacagtataggatacatatagc--atattaaatatgtgctaattgactgcctatgttatttgtaaggctt-------acagtaggctgtttgtaggtaagttttgtgggagtgaaag i cebCap1.NW_016107540v1 I 4 I 774 s aotNan1.NW_018514471v1 1862203 111 - 9267652 aagaatacagtataggatac--atagc--atattaaatatgtgctaattgactgcctatgttatttgtaaggctt-------acagtaggctatttgtagttaagttttgtgggagtcaaag i aotNan1.NW_018514471v1 I 4 C 0 s otoGar3.GL873564 12689134 102 + 14340318 aagaatacagcgtgcagtacatacaaa--atacaaagaatg------------------gccatcagtaaagccttcagatgtcagtggactgtttgcagttaagctgaggagaatcaaaag i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 981451 916 - 1121937 I e canFam3.chr18 51725632 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=681912.000000 s hg38.chrUn_KI270749v1 33197 86 + 158759 ttata-gtggattttctactgtgca-ggggggccagcacccc-aacctccgtgttgcttaagggtcaactgTACATGTTATTTCCTTTC s panPan2.chr7 108488780 87 - 162613886 ttata-gtggattttctactgtgca-ggggggccagcacccctaacctccgtgttgcttaagggtcaactgTACATGTTATTTCCTTTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11379 85 - 126596 ttata-gtggattttctactgtgca--gggggccagcacccc-aacctccatgttgcttaagggtcaactgTACATGTTATTTCCTTTC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735626 88 + 99891981 ttata-gtggattttctactgtgcggggggggccagcacccctaacctccgtgttgcttaagtgtcaactgTACCTGTTATTTCCTTTC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436129 87 - 185818997 ttgta-gtggattttctatggtgca-agggggccagcacccctaacctccgtgttgcttaaggttcaactgTACATGTTATTTCCTTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265758 87 + 192294377 ttgta-gtggattttctatggtgca-agggggccagcacccctaacctccgtgttgcttaaggttcaactgTACATGTTATTTCCTTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2747811 87 + 3123512 ttgta-gtggattttctatggtgca-agggggccagcacccctaacctccatgttgcttaaggttcaactgTACATGTTATTTCCTTTC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2468108 87 + 10077455 ttata-gtggattttctatggtgca-agggagccagcacccctaacctccgtgttgcttaaggttcaactgTACATGTTATTTCCTTTC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5676071 87 + 127223203 ttata-gtggattttctatggtgca-agggggccagcacccctaacctccgtgttgcttaaggttcaactgTACATGTTATTTCCTTTC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1120339 87 - 1799296 ttgta-gtggattttctatggtgca-agggggccagcactcctaacctccgtgttgcttaaggttcaactgTACATGTTATTTCCTTTC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1718978 87 + 6934359 ttaga-gtggactttttatggtgca-agggggccagcacccctaacctctgtgttgcttagggttcaactATACATGTTATTTCCTTTC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074847 86 - 128169293 atata-gtagattttctactgagtg-ggagggctgg-acccttaacctcttagttgcttaagggtcaactgTACATGATATCTCCTTTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 696981 86 - 18371965 gtata-gtagattttctactgagca-ggagggctgg-cacccctacctctgtgttgcttaagggccaactgTACATGATATTTCCTTTC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1356659 86 + 3566421 ttata-gtagattttctactgagca-ggagggctgt-acccctaacctttgtgttgcttaagggtcaactgTACGCGATATTTCCTTTC i cebCap1.NW_016107540v1 I 774 C 0 s aotNan1.NW_018514471v1 1862314 85 - 9267652 ttata-gtagattttctactgagca-ggagggctgg-acccc-aacctctgtgttgcttaagggtcaactgTACATGATATTTCCTTTC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12689236 67 + 14340318 ttatacatggattttcaactgtgca--gagcatcagcacccctaa--------------------cacctgTACATGTTATTTGTGGTA i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 981451 916 - 1121937 I e canFam3.chr18 51725632 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=924844.000000 s hg38.chrUn_KI270749v1 33283 103 + 158759 CTGTAAGAGAAAAATGATGAGAAGGTCTTTTCTCCAATAAGTGTATTCAAAATGTAGCAGATTTGAAATGTGTTGGCGCCACCATTTTGCGTCTCACTTTGAA s panPan2.chr7 108488867 103 - 162613886 CTATGAGAGAAGAATGATGAGAAGCTCTTTTCCCCAATAAGTGTATTCAAAATGTAGCAGACTTGAAATGTGTTGGCGCCACGATTTTGCGTCTCACTTTGAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11464 103 - 126596 CTGTAAGAGAAAAATGATGAGAAGGTCTTTTCTCCAATAAGTGTCTTCAAAACGTAGCAGATGTGAAATGTGTTGGTGCCACCATTTTGCGTCTCACTTTGAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735714 103 + 99891981 CTGTAAGAGAAAAATGATGAGAAGGTCTTTTCTCCAATAAGTGTGTTCAAAATGTAGCAGACTTGAAATGTGTTGGCGCCACCATTTTGTGTCTCACTTTGCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436216 103 - 185818997 CTGTAAGAGAAAAATGATGAGAAGTTCTTTTCTCCAGTAAGTGTACTCAAAATGTAGCAGACTTGAAATATGTTGGCTCCACCATTGTGTGTCTCACTTTAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265845 103 + 192294377 CTGTAAGAGAAAAATGATGAGAAGTTCTTTTCTCCAGTAAGTGTACTCAAAATGTAGCAGACTTGAAATATGTTGGCTCCACCATTGTGTGTCTCACTTTAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2747898 103 + 3123512 CTGTAAGAGAAAAATGATGAGAAGTTCTTTTCTCCAGTAAGTGTACTCAAAATGTAGCAGACTTGAAATATGTTGGCTCCACCATTGTGTGTCTCACTTTAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2468195 103 + 10077455 CTGTAAGAGAAAAATGATGAGAAGTTCTTTTCTCCAGTAAGTGTATTCAAAATGTAGCAGACTTGAAATATGTTGGCTCCACCATTTTGTGTCTCACTTCGAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5676158 103 + 127223203 CTGTAAGAGAAAAATGGTGAGAAGTTCTTTTCTCCAGTAAGTGTATTCAAAATGTAGCAGACTTGAAATATGTTCGCTCCACCATTTTGTGTCTCACTTTGAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1120426 103 - 1799296 CTGTAAGAGAAAAATGATGAGAAGTTCTTTTCTCCAGTAAGTGTATTCAAAATGTAGTAGACTTGAAATATGTTGGCTCCATCATTTTGTGTTTCACTTTGAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1719065 103 + 6934359 CTGTAAGAGAAAAATGATGAGAAGTTCTTTTCTCCAGTAAGTGTATTAAAAATGTAGCAGACTTGAAATATGTTGGCTCCACCATTTTGTGTCTCACTTTGAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108074933 103 - 128169293 CTACAAGAGAAAAATGATGAGAATATATTTTCTTTAGGACGTGTGTTCAAAATGTAGCAGACTTCAAATATGTTGGTGCCACTATTTTGTGCCTCACTTTGAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 697067 98 - 18371965 CTACAAGAGAAAAATGATGGGAATATATTTTCTTTA----GTGTGTTCAAAACGTAGCAGACTTCAAATGTGTTGGTGTCACGA-TTTGTGCCTCACTTTGAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1356745 102 + 3566421 CTACAGGAGAAAAATGATGATAATATATTTTCTTTAGTAAGTGTGTTCAAAATGTAGCAGAC-TCAAATGTGTTGGTGCCACGATTTTGTGCCTCACTTTGAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862399 103 - 9267652 CTACGAGAGAAAAATGATGAGAATATATTTTCTTTAGTATGTGTATTCAAAATGTAGTAGACTTCAAATGTGTTGTTGCCACGATTTTGTGCCTCACTTTGAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12689303 103 + 14340318 CTACCAGAGGGCTATGCTACAAAGACACTTTCATTAGAAAGTATATTCAAAGCATAGCAGACTTTAAATGTGTCAGTGCCACCATTTTGTGTCTCATTTTtgt i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51725632 98 - 55844845 CTATAAAAATAAAGTGATTCAAAGACATGTT----AATAAGTGTATTCAAAGTGTAGCAGAATTTAAATGCATTAGTACT-CCATTTTGTATCTCACTTTAAA i canFam3.chr18 C 0 I 201 e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 981451 916 - 1121937 I e panTro5.chr1 101808816 54727 - 228573443 I a score=32800.000000 s hg38.chrUn_KI270749v1 33386 3 + 158759 AAC s panPan2.chr7 108488970 3 - 162613886 AAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11567 3 - 126596 AAC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735817 3 + 99891981 AAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436319 3 - 185818997 AAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265948 3 + 192294377 AAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2748001 3 + 3123512 AAC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2468298 3 + 10077455 AAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5676261 3 + 127223203 AAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1120529 3 - 1799296 AAC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1719168 3 + 6934359 AGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108075036 3 - 128169293 AAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 697165 3 - 18371965 AAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1356847 3 + 3566421 AAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862502 3 - 9267652 AAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12689406 3 + 14340318 aac i otoGar3.GL873564 C 0 I 500 s canFam3.chr18 51725931 3 - 55844845 AAG i canFam3.chr18 I 201 C 0 e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 981451 916 - 1121937 I e panTro5.chr1 101808816 54727 - 228573443 I a score=224806.000000 s hg38.chrUn_KI270749v1 33389 27 + 158759 TTATTATTTAAAATCGTACTAAAGCCT s panPan2.chr7 108488973 27 - 162613886 TTATTATTAAAAATCGTACTAAAGCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11570 27 - 126596 TTATTATTTAAAATCGTACTAAAGCCT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735820 27 + 99891981 TTATTATTAAAAATCGTACTAAAGCCT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436322 27 - 185818997 TTATTATTAAAAATCATACTAAAGCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265951 27 + 192294377 TTATTATTAAAAATCATACTAAAGCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2748004 27 + 3123512 TTATTATTAAAAATCATACTAAAGCCT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2468301 26 + 10077455 TTATTATT-AAAATTGTACTAAAGCCT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5676264 27 + 127223203 TTATTATTAAAAATTGTACTAAAGCCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1120532 20 - 1799296 TTATTATTAAAAAATGTACT------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1719171 27 + 6934359 TTATTATTAAAAATCATACTAAGGCCT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108075039 27 - 128169293 TTATAATCAAAAATCATACTAAAGCCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 697168 27 - 18371965 TTATAATCAAAAATCATACTAAAGCCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1356850 27 + 3566421 TTATAATCAAAAATCATGCTAAAGCCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862505 27 - 9267652 TTATAATCAAAAATCATACTAAAGTCT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51725934 27 - 55844845 TTATTATCAAAAATCACACTAAAGGCT i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 981451 916 - 1121937 I e otoGar3.GL873564 12689409 500 + 14340318 I e panTro5.chr1 101808816 54727 - 228573443 I a score=866273.000000 s hg38.chrUn_KI270749v1 33416 124 + 158759 ACCTTAC-TTTTCCAACATTAGAAAAAATGTTACAAAGAAAAGGGGTGAAACCAT-GCTAGTTTGCCCTGAA--------ATTTGAA---CTTATCTTTTAAAA---ATATATTTTTACATTAATGACTTCCAAAATA------GA s panPan2.chr7 108489000 124 - 162613886 ACCTTAC-TTTTCCAACCTTAGTAAAAATGTTACAAAGAAAAGGGGTGAAACCAT-GCTAGTTTGCACTGAA--------ATTTGAA---ATTATCTTTTAAAA---ATATATTTTTACTTTAATTACTTCCAAAATA------GA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11597 124 - 126596 ACCTTAC-TTTTCCAACCTTAGAAAAAATGTTCCAAAGAAAAGGGCTGAAACCAT-GCTAGTTTGCCCTGAA--------ATTTGAA---ATTATCTTTTAAAA---ATCTATTTTGACATTAATTACTTCCAAAATA------GA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735847 124 + 99891981 ACCTTAC-TTTTCCAACCTTAGTAAAAGTGTTACAAAGTAAAGTGGTGAAACCAT-GCTAGTTTGCACTGAA--------ATTTGAA---ATTATCTTTTAAAA---ATATATTTTTACTTTAATTACTTCCAAAATA------GA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436349 120 - 185818997 ACCTTAC-TTTCCCAACCTTAGAAAAACTGGTACAAAGAAAAGGGATGGAAACAT-GCTAGTTTGCACTGAA--------ATTTGAA---ATTATCTCTCAAAA---ATATATTTTCACTTT----ACTTCCAAAATG------GA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67265978 120 + 192294377 ACCTTAC-TTTCCCAACCTTAGAAAAACTGGTACAAAGAAAAGGGATGGAAACAT-GCTAGTTTGCACTGAA--------ATTTGAA---ATTATCTCTCAAAA---ATATATTTTCACTTT----ACTTCCAAAATG------GA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2748031 120 + 3123512 ACCTTAC-TTTCCCAACCTTAGAAAAACTGGTACAAAGAAAAGGGATGGAAACAT-GCTAGTTTGCACTGAA--------ATTTGAA---ATTATCTCTCAAAA---ATATATTTTCACTTT----ACTTCCAAAATG------GA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2468327 119 + 10077455 ACCTTAC-TTTCCCAACCTTAGAAAAACTGGAAC-AAGAAAAGGGATGGAAACAT-GCTAGTTTGCACTGAA--------ATTTGAA---ATTATCTCTCAAAA---ATATATTTTCACTTT----ACTTCCAAAATG------GA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5676291 120 + 127223203 ACCTTAC-TTTCCCAACCTTAGAAAAACTGGAACAAAGAAAAGGGATGGAAACAT-GCTAGTTTGCACTGAA--------ATTTGAA---ATTATCTCTCAAAA---ATATATTTTCACTTT----ACTTCCAAAATG------GA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1120552 97 - 1799296 ------------------------AAACTGGTACAAAGAAAAGGGATGGAAACAT-GCTAGTTTGCACTGAA--------ATTTGAA---ATTATCTCTCAAAA---ATATATTTTCACTTT----ACTTCCAAAATG------GA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1719198 120 + 6934359 ACCTTAC-TTTTCCAACCTTAGAAAAACTGGTACAAAGAAAAGGGATGGAAACAT-GCTAGTTTGCACTGAA--------ATTTGAA---ATTATCTCTCAAAA---ACATATTTTTGCTTT----ACTTCCAAAATG------GA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108075066 124 - 128169293 ACCTTAT-TTTTCCAACATTAGAAAATCTGTTACAGGGACAAG---TAAAAACAT-GCTAATTTGCACTGCA--------ATTGGAA---ATCGTGTTTCTAAA---ATATATTTTTGTTTTAATTACCTCCAGAGTGAAA---GA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 697195 124 - 18371965 ACCTTGT-TTTTCCAACATTAGAAAATCCGTTACAGGGACGAG---TAAAAACAT-GCTAGTTTGCACTGCA--------ATTGGAA---ATCGTCTTTCTAAA---ATATATTTTTGCTTTAATTACCTCCAGAGCGAAA---GA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1356877 124 + 3566421 ACCTTAT-TTTTCCAACATTATAAAATCTGTTACAGGGACAGG---TAAAAACAT-GCTAGTTTGCATTGCA--------ATTGGAA---ATCGTCTTTCTAAA---ATATATTTTTGCTTTAATTACCTCCAGGGTGAAA---GA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862532 124 - 9267652 ACCTTAT-TTTTCCAACATTAGAAAATCTGTTACAGGGACGAG---TAAAAACAT-GCTAGTTTGCACTGCA--------ATTGGAA---ATTGTCTTTCTAAA---ATATATTTTTGCTTTAATTACCTCCAGAGTAAAA---GA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12689909 135 + 14340318 ACTTATC-CTTTCCAACATTAGAAAAGCTGTTGCAAACCCATTTGGTGAAAACGTAACGTGTTTGCAGTCCATGTACCTGGTCTGCATGCATTTTATTTTTTAA---ATGTAATTTCTCTTT----ACCTCAAGAGCTAAA---GA i otoGar3.GL873564 I 500 C 0 s canFam3.chr18 51725961 134 - 55844845 ATTTCATATTTTTTTGTGTTAGAGAAGCTGGGACAACCAGAATGGGTGAAAACAT-ACTAGTTTGCATTGTA--------ATCTAAA---ATTTTATGCTTAAATTTTTTTTTTTTTGCCTTCATTACCTCAAAAGCTAAAGAGAA i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 981451 916 - 1121937 I e panTro5.chr1 101808816 54727 - 228573443 I a score=2270467.000000 s hg38.chrUn_KI270749v1 33540 265 + 158759 GAT---CAGTTGCATACAAATGGCAGGTCACCGTAATCCACCCTATGGCTGCACTTAGATTCATGAGGAATTGTGCCAACTAGAAAGGGCAGAGAAGAGGAATA--GGGTGCTCTGCGTCTTGAAATATAAACAGGCACATAGCCACATGCTTT-GATTCTCTTGTCACT------TTGTACTTACAGCTAGGAAGAGGGCATGTTTGTGTATTTTTATGCTAATTATTATCCAAATTGTT-AGTGATTTACGCTTTCAGAACCATATAAAGA-------------TTTTT s panPan2.chr7 108489124 266 - 162613886 GAT---CAGTTGCATACAAATGGCAGGTCACCCTAATCCACCCTATGACTGCACTTAGATTCATGAGGAATTGTGCCATCTAGAAAGGACAGAGAAGAGGAATA--GAGTGCTCTGCGTCTTGAAATATAAACATGCACATAGCCACATGCTTT-GATTCTGTTGTCACT------GTGTACTTACTGCTAGGAAGAGGGCATATTTGTGTATTTTTCTTCTAATTATTATCCAAGTTGTT-AATGATTTAGACTTTCAGAACCACATAAAGA------------TTTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11721 265 - 126596 GAT---CAGTTGCATACAAATGGCAGGTCACCCTAATCCACCCTATGACTGCACTTAGATTCATGA-GAATTGTGCCATCTAGAAAGGGCAGAGAGGAGGAATA--GAGTGCTCTGCGTCTTGAAATATAAACATGCACATAGCCACATGCTTT-GATTCTGTTTTCACT------GTGTACTTACTGCTAGGAAGAGGGCATGTTTGTGTATTTTTATGCTAATTGTTATCCAAGTTGTT-AATGATTTACGCTTTCAGAACCATATAAAGA------------TTTTTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55735971 266 + 99891981 GAT---CAGTTGCATACAAATGGCAGGTCACCCTAATCCACCCTACGACTGCACATAGATTCCTGAGGAATTGTGCCATCTAGAAAGGGCAGAGAAGAGGGATA--GAGTGCTCTGCATCTTGAAATATAAACATGCACATAGCCACATGCCTT-GATTCTGTTGTCACT------GTGTACTTACTGCTAGGAAGAGGGCATATTTGTGTATTTTTATTCTAATTATTATCCAAGTTGTT-AATGATTTAGGCTTTCAGAACCA-ATAAAGA-----------TTTTTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436469 270 - 185818997 GAT---CAATT-TATACAGATGGCAGGTCACCCTAATCCACCCTATGACTGCACTTAGATTCCTGAGGAATTGTGCCATCTAGAAAGGACAGAGAAGAGGAATA--GAATGCTCCGCATCTTGGAATATAAACATGCGCATTGCCACGTGCTTT-GATTCTGTTGTCACTGTCACTGTGTACTTACTGCTAGGAAGAGGGCAGATTTGTGTATTTTTATTCTAATTATTATATAAGTTGTT-AATGATTTAGGCTTTCAGAACCATATAAAGA------------TTTGT- i rheMac8.chr3 C 0 I 2 s macFas5.chr3 67266098 270 + 192294377 GAT---CAATT-TATGCAGATGGCAGGTCACCCTAATCCACCCTATGACTGCACTTAGATTCCTGAGGAATTGTGCCATCTAGAAAGGACAGAGAAGAGGAATA--GAATGCTCCGCATCTTGGAATATAAACATGCGCATTGCCACGTGCTTT-GATTCTGTTGTCACTGTCACTGTGTACTTACTGCTAGGAAGAGGGCAGATTTGTGTATTTTTATTCTAATTATTATATAAGTTGTT-AATGATTTAGGCTTTCAGAACCATATAAAGA------------TTTTT- i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 2748151 270 + 3123512 GAT---CAATT-TATACAGATGGCAGGTCACCCTAATCCACCCTATGACTGCACTTAGATTCCTGAGGAATTGTGCCATCTAGAAAGGACAGAGAAGAGGAATA--GAATGCTCCGCATCTTGGAATGTAAACATGCGCATTGCCACGTGCTTT-GATTCTGTTGTCACTGTCACCGTGTACTTACTGCTAGGAAGAGGGCAGATTTGTGTATTTTTATTCTAATTATTATATAAGTTGTT-AATGATTTAGGCTTTCAGAACCATATAAAGA------------TTTTT- i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 2468446 264 + 10077455 GAT---AAATT-TATACAGATGGCAGGTCACCCTAATCCACCCTATGACTGCACTTAGATTCATGAGGAATTGTGCCATCTAGAAAGGACAGAGAAGAGGAATA--GAGTGCTCCGCATCTTGGAATATAAACATGCACATTGCCACATGCTTT-GATTCTGTTGTCACT------GTGTACTTACTGCTAGGAAGAGGGCATATTTGTGTATTTTTATTCTAATTATTATACAAGTTGTT-AATGATTTAGGCTTTCAGAACCATATAAAGA------------TTTTT- i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 5676411 265 + 127223203 GAT---CAATT-TATACAGATGGCAGGTCACCCTAATCCACCCTATGACTGCACTTAGATTCATGAGGAATTGTGCCATCTAGAAAGGACAGAGAGGAGGAATA--GAGTGCTCCGCATCTTGGAATATAAACATGCACATTGCCACATGCTTT-GATTCTGTTGTCACT------GTGTACTTACTGCTAGGAAGAGGGCATATTTGTGTATTTTTATTCTAATTATTATACAAGTTGTT-AATGATTTAGGCTTTCAGAACCATACAAAGA-----------TTTTTT- i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 1120649 264 - 1799296 GAA---CAATT-TATACAGATGGCAGGTCACCCTAATCCACCCTATGACTGCACTTAGATTCATGAGGAATTGTGCCTTCTAGAAAGGACAGAGAAGAGGAATA--GAGTGCTCCGCATCTTGGAATATAAACATGCACATTGCCACATGCTTT-GATTCTGTTGTCACT------GTGTACTTACTGCTAGGAAGAGGGCATATTTGTGTATTTTTATTCTAATTATTATACAAGTTGTT-AATGATTTAGGCTTTCAGAACCATATAAAGA------------TTTTT- i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 1719318 264 + 6934359 GAT---CAATT-TATACAGATGGCAGGTCACCCTAATCCACCCTATGACTGCACTTAGATTCATGAGGAATTGTGCCATCTGGAAAGGACAGAGAAGAGGAATA--GAGTGCTCTGCATCTTGGAATACAAACATGCACATTGCCACATGCTTT-GATTCTGTTGTCACT------GTGTACTTACTGCGAGGAAGAGGGCATATTTGTGTATTTTTATTCTAATTATTATACAAGTTGTT-AATGATTTAGACTTTCAGAACCATATAAAGT------------TTTTT- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108075190 265 - 128169293 GAA---CAATTGCACAGAAATGACAGGAGATCCTAATCCACCCTATGACTGCACTTAGATTCACAAGGAATTGTGC-ATCTAGAAAGAGCAGAGGAGAGGAATA--GAGTACCCTGCATCTTGGAATGTAAACGTGCACATAGTCACATGCTTTTGAATGTGTTGTCACT------GTGTATTTACTGCTAGGAAGAGCGCATATTTGTGTATTTTTATTCTAATTATTATTTCATTTGTT-AATCATTTGGGCTTTCAAAACCATGTATAGA------------TTTTT- i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 697319 266 - 18371965 GAA---CAATTGCACAGAAATGATAGGACATCCTAATCCACCCCATGACTGCACTTAGATTCAGAAGGAATTGTGCTGTCTAGAAAGAGCGGAGGAGAGGAATA--GAGTACCCTGCATCTTGGAATGTAAACATGTACATCCCTACGTGCTTTCGAATGTGCCGTCA-T------GTGTCTTTACTGCTAGGAAGAGTGCATATTTCTGTATTTTTATTCTAATTATTATTTCATTTGTT-AATGGTTTATGCTTTCAAAACCATGCATAGA-----------TTTTTT- i saiBol1.JH378145 C 0 I 2 s cebCap1.NW_016107540v1 1357001 267 + 3566421 GAA---CAATTGCACAGAAATGACAGGAGATCCTAATCCACCCTATGACTGCACTTAGATTCACGAGGAATTGTGCTGTCTAGAAAGAGCAGAGGACAGGGATA--GAGTAACCTGCATCTTGGAATGTAAACATGCACATCGCCACATGCCTTTGAATGTGTTGTCACT------GTGTGTTTACTGCTAGGAAGAGCCTACATTTGTGTATTTTTATTCTAATTATTATTTCATTTGTT-AATGATTTAGGCTTTCAAAACCATGTATAGA-----------TTTTTT- i cebCap1.NW_016107540v1 C 0 I 2 s aotNan1.NW_018514471v1 1862656 266 - 9267652 GAA---CAATTGCACAGAAATGACAGAAGATCTTAATCCACCCTGTGACTGCACTTAGATTCACGAGGAATTGTGCTTTCTTTCTAGAACAGAGGAGAGGAATA--GAGTACCCTGCATCTTGGAATGTAAACATGCACATAGCCACATGCTTTTGAATGTGTTGTCACT------GTGTATTTACTGCTAGGAAGAGAGCATATTTGTGTATTTATATTCTAATTATTATTTCATTTGTT-AATGATTTAGGGTTTCCAAACCATGTATAGA------------TTTTT- i aotNan1.NW_018514471v1 C 0 I 2 s otoGar3.GL873564 12690044 257 + 14340318 GAAAAGCAGTTACATAGAAACAGCAGAG----------CATCTGACGACTGCACTGAGATCAATGAGGAACTGTGTCATCTAGAAAAG--AGTGGAGAGGAGTGGTGGGTGCTCGATGTCTGAGAATAAGAAAGCACATACAGCTATGCCCTTT-GATTATGTGCTCACG------GAACATTTATGGCTGGGAAATAGGCAT-TTTGTGTACTTTTATTCCTATTGTTATCCAAGTTACT-AATGATTTGGGCTTTCACAATAGTATATGGA------------TTTCT- i otoGar3.GL873564 C 0 I 2 s canFam3.chr18 51726095 186 - 55844845 GAG---CAGTTCCATACAAATATCAAAAC-CCCTGCTTTATCCTATGATTGTACTTTGATTTATGAAAAACTGTATCATCTAGAGTGAGCAGAGAAAAGGAATA--GAGTGTGCTGCTTCTTGGAACATAAAAATGGATGCAGGCATATGCTTT-G----TATTATCATC------CTATTTTTACAGCTTAAAAGAGGGTAT---------------------------------------------------------------------------------------- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1128137 271 + 1446996 GAG---TAATTGCATACAAATAGCAGCACACCTTTCTCTACCCTGAGA-TGCACTTAGATTCTTGAG---CTGAATCACAGAGGGTGCAAAGAGATGCAGAATA--G-GTGTTTTCTATCCTGGGAGGTAAAAATGCACACCACTATAGGGTGA-GG-TGTGTTCTCAAT------GGATTTATACTTCTGAGACAAA-ACATTTCCATGTATGGCTATTTTAATTCTTAACCAGATTGCTAAAAGATGAAGTTTCTTATGCACACAAATGGAATTGTTGTTTTTTTTTT- i dasNov3.JH578441 N 0 C 0 e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 981451 916 - 1121937 I e panTro5.chr1 101808816 54727 - 228573443 I a score=13923.000000 s hg38.chrUn_KI270749v1 33805 1 + 158759 T s panPan2.chr7 108489390 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11986 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55736237 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436741 1 - 185818997 T i rheMac8.chr3 I 2 C 0 s macFas5.chr3 67266370 1 + 192294377 T i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 2748423 1 + 3123512 T i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 2468712 1 + 10077455 T i cerAty1.NW_012000909v1 I 2 C 0 s papAnu3.chr3 58142220 1 + 180432695 T i papAnu3.chr3 N 0 I 1931 s chlSab2.chr21 5676678 1 + 127223203 T i chlSab2.chr21 I 2 C 0 s manLeu1.NW_012105809v1 1120915 1 - 1799296 T i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 1719582 1 + 6934359 T i colAng1.NW_012115910v1 C 0 I 3 s calJac3.chr8 108075457 1 - 128169293 T i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 697587 1 - 18371965 T i saiBol1.JH378145 I 2 C 0 s cebCap1.NW_016107540v1 1357270 1 + 3566421 T i cebCap1.NW_016107540v1 I 2 C 0 s aotNan1.NW_018514471v1 1862924 1 - 9267652 T i aotNan1.NW_018514471v1 I 2 C 0 s otoGar3.GL873564 12690303 1 + 14340318 T i otoGar3.GL873564 I 2 C 0 s dasNov3.JH578441 1128408 1 + 1446996 T i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 981451 916 - 1121937 I e canFam3.chr18 51726281 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=885032.000000 s hg38.chrUn_KI270749v1 33806 98 + 158759 CCTTTCAGATAT-AA-ACTATCTTGCATTGTTCTTCTGATCATATGAGGAATAAATTTGCCTAAAT-ATTCTTCAGACCATAATATTATGT-CCATATAAAT s panPan2.chr7 108489391 98 - 162613886 CCTTTCAGATAT-AA-ACTATCTTGCATTGTTCTTCTGATCATATGAGGGATAAATTTACCTAAAT-ATTCTTCAGATCATAATATTATAT-CCATATAAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 11987 98 - 126596 CCTTTCAGATAT-AA-ACTATCTTGCGTTGTTCTTCTGATCATATGAGGGATAAATTTGCCTAAAT-ATTCTTCAGACCATAATAGTATGT-CCATATAAAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55736238 98 + 99891981 CCTTTCAGATAT-AA-ACTGTCTTGCATTGTTCTTCTGATCATATGAGGTATAAATTTACCTAAAT-ATTCTTCAGACCATAATATTATGT-CCATATATAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436742 98 - 185818997 CCTTTCAGATAT-AA-ACTATCTTGCATTGTTCTTCTGATCATATGAGGGATAAATTTACGCAAAT-ATTCTTCAGACCATAATATTATGT-CCACATAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67266371 98 + 192294377 CCTTTCAGATAT-AA-ACTATCTTGCATTGTTCTTCTGATCATATGAGGGATAAATTTACGCAAAT-ATTCTTCAGACCATAATATTATGT-CCACATAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2748424 98 + 3123512 CCTTTCAGATAT-AA-ACTATCTTGCATTGTTCTTCTGATCATATGAGGGATAAATTTACGCAAAT-ATTCTTCAGACCATAATATTATGT-CCACATAAAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2468713 98 + 10077455 CCTTTCAGATAT-AA-ACTATCTTGCATTGTTCTTCTGATCATATGAGGGATAAATTTACGCAAAT-ATTCTTCAGACCATAATGTTATGT-CCACATAAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5676679 98 + 127223203 CCTTTCAGATAT-AA-ACTATCTTGCACTGTTCTTCTGATCATATGAGGGATAAATTTACACAAAT-ATTCTTCAGACCATAATGTTATGT-CCACATAAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1120916 98 - 1799296 CCTTTCAGATAT-AA-ACTATCTTGCATTGTTCTTCTGATCATATGAGGGATAAATTTACGCAAAT-ATTCTTCAGACCATAATGCTATGT-CCATATAAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1719586 98 + 6934359 CCTTTCAGATAT-AA-ACTATGTTGCATTGTTCTTCTGATCATATAAGGGATAAATTTACATAAAT-ATTCTTCAGACCATAATATTATGT-CCATATAAAT i colAng1.NW_012115910v1 I 3 C 0 s calJac3.chr8 108075458 98 - 128169293 CCTTTGAGATAT-AA-ACTATCTTATTTTCATCTTCTGATCATATGCAGGATAAGTTTACCTGCAT-ACTCTGAAGATCATAATATTATGT-CCATATAAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 697588 98 - 18371965 CCTTTGAGATAT-AA-ACTATCTTGCCTTCATCTTCTGATCATATGAGGGATAAGTTTACCTACAT-ACTCTGTAGATCATAGTATTATGT-CCATATAAGT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1357271 98 + 3566421 CCTTTGAGATAT-AA-ACTATCTTGCCTTCGTCTTCTGATCATATGAGGGATAAGTTTACCTACAT-ATGCTGCAGGTCACAATATTATGT-CCATATAAAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1862925 95 - 9267652 CCTTTGAGATAT-AA-ACTCTCTTGCCTTTGTCTTCTGATCATAAGAGGGATAAGTTTACTTACAT-ACTCTGCAGATCA---TATTATGT-CCATATAAAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12690304 97 + 14340318 TCTTTCAGATATAAA-ACTATTTTGCCCTGGTCTTATGATCATATGAGAAATAAACTTACCTAAATCATTCTTCAGATCATAA---TATGT-CCATAGTAAT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51726281 44 - 55844845 ----------------------TTG----------------ATACAATAGATAAAC--------AT-ACT-----------GATTTTATATGCCatatatat i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1128409 98 + 1446996 CCTTTCACAAAT-AAGAATGTTTCACCTTGATTTTACGATCATAGGAAGGACACGTTTACATTTAA-ACTCTATAGATCATAATA-TATGT-ACATTTAAAT i dasNov3.JH578441 C 0 I 360 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 981451 916 - 1121937 I e panTro5.chr1 101808816 54727 - 228573443 I a score=268797.000000 s hg38.chrUn_KI270749v1 33904 33 + 158759 GCCAGTAGC--AAGAGTAGAATCAACCACAACTGC s panPan2.chr7 108489489 33 - 162613886 GCCAGTAGC--AAGAGTTGAATCAACCACAACTGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12085 33 - 126596 GCCAGTAGC--AAGAGTAGAATCAACCACAACTGC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55736336 33 + 99891981 ACCAGTAGC--AAGAGTACAATCAACCACAACTGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436840 33 - 185818997 GCCAGTAGC--AAGAGTAGAATCAACCACAACTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67266469 33 + 192294377 GCCAGTAGC--AAGAGTAGAATCAACCACAACTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2748522 33 + 3123512 GCCAGTAGC--AAGAGTAGAATCAACCACAACTGC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2468811 33 + 10077455 GCCAGTAGC--AAGAGTAGAATCAACCACAACTGC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5676777 33 + 127223203 GCCAGTAGC--AAGAGTAGAATCAACCACAACTGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121014 33 - 1799296 GCCAGTAGC--AACAGTAGAATCAACCACAACTGC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1719684 33 + 6934359 GCCAGTAGC--AAGAGTAGAATCAACCACAACTGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108075556 33 - 128169293 GTCAACTGT--TAGAGTAGAATCAACCACACCTAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 697686 33 - 18371965 GTCAACTGT--AAGAGTAGAATCAACCACAGCTAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1357369 33 + 3566421 GTCAACCGT--AAGAGTAGAATCAACCACAGCTAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1863020 33 - 9267652 GTCAGCTGT--AAGAGTAGAATCAACCACAGCTAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12690401 35 + 14340318 TCCAGAAATAGAAGTGTAGAATCAAGCACAACTGT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51726325 15 - 55844845 at------t--aaaattataata------------ i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 981451 916 - 1121937 I e dasNov3.JH578441 1128507 360 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=913482.000000 s hg38.chrUn_KI270749v1 33937 101 + 158759 CTTTGTAATTATTTAAAGC-AC--GTGTGCCTA----TAATTGGCATTTTATATAATCAAGAATCTTTGATATAATAATCTCTCAACTATTTGAAACATGGCTCAC----AT------ s panPan2.chr7 108489522 109 - 162613886 CTTTGTAATTATTTAAAGC-AT--GTGTGCCTATAAGTAATTGGCCTTTTATATAATCAAGAATCTTTGATATAATAATCTCTCAACTATTTCAAACATGGGTCACatatat------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12118 109 - 126596 CTTTGTAATTATTTAAAGC-AT--GTGTGCCTATAAGTAATTGGCATTTTATATAATCAAGAATCTTTGATATAATAATCTCTCAACTATTTGAAACATGGCTCACATGTAT------ i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55736369 109 + 99891981 CTTTGTAATTATTTAAAGC-AT--GTGTGCCTATAAGTAATTGGCATTTTATATAATCAAGAATCTTTGATATAATAATCTCTCAACTATTTGAAACATGGCTCACATATAT------ i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436873 108 - 185818997 CTTTGTAATTATTTAAAGC-AT--GTGTGCCTAAAAGCAACTGGCATTTTA-ATAATCAAGAATCTTTGATATAGTAAGTTCTCAACTATTTGAAACATGGCTCATGTGTTT------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67266502 108 + 192294377 CTTTGTAATTATTTAAAGC-AT--GTGTGCCTAAAAGCAACTGGCATTTTA-ATAATCAAGAATCTTTGATATAGTAAGTTCTCAACTATTTGAAACATGGCTCATGTGTTT------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2748555 108 + 3123512 CTTTGTAATTATTTAAAGC-AT--GTGTGCCTAAAAGCAACTGGCATTTTA-ATAATCAAGAATCTTTGATATAGTAAGTTCTCAACTATTTGAAACATGGCTCATGTGTTT------ i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2468844 108 + 10077455 CTTTGTAATTATTTAAAGC-AT--GTGTGCCTAAAAGCAATTGGCATTTTA-ATAATCAAGAATCTTTGATATAGTAAGTTCTCAACTATTTGAAACATGGCTCGTGTGTTT------ i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5676810 108 + 127223203 CTTTGTAATTATTTAAAGC-AT--GTGTGCCTAAAAGCAATTGGCATTTTA-ATAATCAAGAATCCTTGATACAATAAGTTCTCCACTATTTGAAACATGGCTCATGTGTTT------ i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121047 108 - 1799296 CTTTGTAATTATTTAAAGC-AT--GTGTGCCTAAAAGCAATTGGCATTTTA-ATAATCAAGAATCTTTGATATAGTAAGTTCTCAACTATTTGAAACATGGCTCGTGTGTTT------ i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1719717 108 + 6934359 CTTTGTAATTATTTAAAGC-AT--GTGTGCCTAAAAGCAGCTGGCATTTTA-ATAATCAAGAATCTTTGATATAATAAGCTCTCAACTATTTGAAACATGGCTCATGTGTTT------ i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108075589 108 - 128169293 CTTTGTAATTATTTTAAAC-AT--GTGTGCCTAAAAATAATTGGTATTTCATATAATCAAGTATCTTTGATATAGTAAGTTCTCAACTATTAGAAACATTACTCATATATT------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 697719 108 - 18371965 CTTTGTAATTATTTTAAAC-AT--GTGTGCCTACAAGTAATTGATATTTTATAAAATCAAGTATCTTTGATACAGTAAGTTCTCAACTATTAGAAACATTACTCATATATT------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1357402 109 + 3566421 CTTTGTAGTTATTTTAAACAAT--GTGTGCCTAAAAGTAGTTGGTATTTTATATAATCAAGTATCTTTGATATAGTAAGTTCTCAACTATTAGAAACATTATTCATATATT------- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1863053 108 - 9267652 CTTTGTAATTATTTTAAAC-AT--GTGTGCCTAAAAGTAATTGGTATTTTATATAATCAAGTATCTTTGATATAATAAGTTCTCAACTATTAGAAATATTACTCATATATT------- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12690436 105 + 14340318 CTTTCTATTTGTTTTAAAC-AT--GTGCTCCTAAAAGTAATCTGTGTTTCATATAATTGAGTGTATTTGATACAATAAGCTCTCAACTATTTCAGATAGTGCATATAT---------- i otoGar3.GL873564 C 0 I 2 s dasNov3.JH578441 1128867 111 + 1446996 CTTTTTAGTTATTTTAAAT-ATAGGTGTGCataaaaatctattttatttaatataatta------tttaataCAACAGGCCCTCAAATTTCTGATGTACTAGAAATATATTTTCATTC i dasNov3.JH578441 I 360 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 981451 916 - 1121937 I e canFam3.chr18 51726340 0 - 55844845 C e panTro5.chr1 101808816 54727 - 228573443 I a score=8281.000000 s hg38.chrUn_KI270749v1 34038 1 + 158759 T s panPan2.chr7 108489631 1 - 162613886 t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12227 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55736478 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436981 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67266610 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2748663 1 + 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2468952 1 + 10077455 T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5676918 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121155 1 - 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1719825 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s tarSyr2.KE946558v1 982367 1 - 1121937 T i tarSyr2.KE946558v1 I 916 I 625 s otoGar3.GL873564 12690543 1 + 14340318 T i otoGar3.GL873564 I 2 C 0 s dasNov3.JH578441 1128978 1 + 1446996 T i dasNov3.JH578441 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e aotNan1.NW_018514471v1 1863161 0 - 9267652 C e cebCap1.NW_016107540v1 1357511 0 + 3566421 C e canFam3.chr18 51726340 0 - 55844845 C e saiBol1.JH378145 697827 0 - 18371965 C e calJac3.chr8 108075697 0 - 128169293 C e panTro5.chr1 101808816 54727 - 228573443 I a score=960475.000000 s hg38.chrUn_KI270749v1 34039 117 + 158759 AATTTTTTATGCAAA----CATATATATAATAT--CATTGTATATGAAACTAAATTTTCGACTTTAGGA---CAGCTTCTTAGAATCC---TGACTTAAAT--GTCTACAGTAATATTTGACTT--AAAAAAA s panPan2.chr7 108489632 116 - 162613886 aattttatatacaaa----tatatatataatat--cattgtatatGAAACTAAATTTTGGACTTTAGAA---CAACTTCCTAGAATCT---TGACTTAAAT--GTCTACAGTAATATTTGACTT---AAAAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12228 117 - 126596 AATTTTCTATGCAAA----TATATATATAATAT--CAGTGTATATGAAACTAAATTTTGGACTTTAGAA---CAGCTTCTTAGAATCC---TGACTTAAAT--GTCTATAGTAATAGTTGGCTT--AAAAAAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55736479 117 + 99891981 AATTTTATGAGCAAA----TATATATATAATAT--CATTGTATATGAAACCAAATTTTGGACTTTAGAA---CAACTTCCTAGAATTT---TGACTTAAAT--GTCTACAGTAATATTTGACTT--AAAAAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133436982 118 - 185818997 AATTTTATATGCATAT---TTTATATATAATGT--AATTGTTTATGAAACTAAATTTTGGACTTTAGAA---CAACTTCCTAGAATCT---TGACTTAAAT--GTCTACAGTAATATTTGACTT--AAAAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67266611 118 + 192294377 AATTTTATATGCATAT---TATATATATAATGT--AATTGTTTATGAAACTAAATTTTGGACTTTAGAA---CAACTTCCTAGAATCT---TGACTTAAAT--GTCTACAGTAATATTTGACTT--AAAAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2748664 118 + 3123512 AATTTTATATGCATAT---TATATATATAATGT--AATTGTTTATGAAACTAAATTTTGGACTTTAGAA---CAACTTCCTAGAATCT---TGACTTAAAT--GTCTACAGTAATATTTGACTT--AAAAAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2468953 118 + 10077455 AATTTtatatgcatatatatatatatataA-----AATTGTTTATGAAACTAAATTTTGGACTTTAGAA---CAACTTCCTAGAATCT---TGACTTAAAT--ATCTACAGTAATATTTGCCTT--AAAAAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5676919 119 + 127223203 AATTTtatatgcata----tatatatataatatataattgtatatGAAACTAAATTTTGGACTTTGGAA---CAACTTCCTAGAATTT---TGACTTAAAT--GTCTACAGTAATATTTGACTT--AAAAAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121156 112 - 1799296 AATTTTATATGCATA----TAT-------ATGTAAAATTGTTTATGAAACTAAATTTTGGACTTTAGAA---CAACTTCCTAGAATCT---TGACTTAAAT--ATCTACAGTAATATTTGCCTT--AAAAAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1719826 114 + 6934359 AATTTtatatgca------tatatatataatat--aattatatatGAAACTAAATTTTGGACTGTAGAA---CAGCTTCCTAGAATCT---TGACTTAAAT--GTCTACAGTAATATTTGACTT---AAAAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108075697 109 - 128169293 ---TTTATATGCAAA----TAT----ATAATAT--CATTGCATATGAAACTAAATTTTGTACTTTAGAA---CAA---CTCAAAATCT---TGACTTAAAC--CTCTACAGtaatatttaatttaaaaaaaaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 697827 114 - 18371965 CA-TTTACATACAGA----TAT----ATAATAT--CATTGCATATGAAACTAAATTTTGTACTTTAGAA---CAACTCCTCAAATTCT---TGACTTAAAT--CTCTACAGtaatatttaatttttaaaaaaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1357511 114 + 3566421 AATTTTATATACAAA----TAT----ATAATAT--CATTGCATATCAAACTAAATTTTGTACTTTAGAA---CAACTCCTCAAAATC----TGACTTAAAT--CTCTTCAGTAATATTTAATTTTAAAAAAAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1863161 112 - 9267652 AATTTTATATGCAAA----TAT----ATAATAT--CATTGCATATGAAACTAAATTTTATACTTTAGAA---CAA---CTCAAAATCT---TGACTTAAAT--CTCTACAGTAATATTTAATTTAAAAAAAAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12690544 113 + 14340318 AACTTCATAGGCATA----TTTACATACA------TATTGCATATGAAACTAAATTTCAGACTTTAGAA---CAATTTGACAGAATTT---TGACTTAAAT--ATCTACAGTTATATTTACTTT--TAAAAAA i otoGar3.GL873564 C 0 I 1 s canFam3.chr18 51726340 116 - 55844845 -----tGTGTGCATA----TATACATATACAAT--CATCACATAAGAAACTAAATTTCAGCCTTTAAAAGTGCAGCTTCACAAAATCA---TGACCAAAATGAGTGTACAATAAAATATATTTC--TAAAAA- i canFam3.chr18 C 0 I 1 s dasNov3.JH578441 1128979 120 + 1446996 GTCTATTTATACATA----CATGCATATAATAT----TTAT-TATGAAACTAAATTTCAGACTTTAAAAGCACAACTTGACAGTATTTGACTAAACTGAAG--GTCTACAGTAAAAAGAGCTTT--TTAAAAA i dasNov3.JH578441 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 982368 625 - 1121937 I e panTro5.chr1 101808816 54727 - 228573443 I a score=9555.000000 s hg38.chrUn_KI270749v1 34156 1 + 158759 T s panPan2.chr7 108489748 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12345 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55736596 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437100 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67266729 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2748782 1 + 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469071 1 + 10077455 T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677038 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121268 1 - 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1719940 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108075806 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 697941 1 - 18371965 t i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1357625 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s dasNov3.JH578441 1129099 1 + 1446996 T i dasNov3.JH578441 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 982368 625 - 1121937 I e otoGar3.GL873564 12690657 1 + 14340318 I e aotNan1.NW_018514471v1 1863273 0 - 9267652 C e canFam3.chr18 51726456 1 - 55844845 I e panTro5.chr1 101808816 54727 - 228573443 I a score=5727658.000000 s hg38.chrUn_KI270749v1 34157 509 + 158759 TTAGCACACTGT---CACTATGATGAAAAAAATTACTATAAATTTATTTAAAAAAATTTTCCACCCTAACATTTAGAATATTCTCACATTCGTGGTTAAAACCTAATGTGATTGTTCTTAGAATTTAGATAAAAAAATGTTCCAGAAAGTTTGAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTGAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAATTATTCAGATTCCCTCTTTGAATTCAAGTGTTTCAGAGATATCTTATTTTAAAATACCAAAATAGGAATAGAATATGAAGGGCTGGTTATGAGTAATATGATACACATTTATGAGAGGATGAG-ATTACAATAACAATACCTC----------CTCTCATAGAATAGCCAGCAAGTCTCCACTAAATAACAGTGTCTTGATTTTATAGATGTTTAATCATGGATATTGAGTT-AATG----TGAACCATTTGTAGACACAGGAGTTTATTAAAGAATTATATAATATC-TTCCAAGTATTTAGAA---- s panPan2.chr7 108489749 508 - 162613886 TTAGCACACTGT---CACTATGATGAAAAAAATTACTATAAAATTATTTTAAAAATTTTTCCACCCTGACATTTAGAATATCCTCACATTTGTAGTTAAAACCTATTGTGATTGTTCTTAGAATTTTGAT-AAAAAATGTTCCAGAAAGTTTGAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAACTATTCAGATTCTCTCTTTGAATTCAAGTGTTTCAAAGATATCTTATGTTAAAGTACCAAAATAGGAATAGGATATGAAGGGCTGATTATGAGTAATATGATACACTTTTATGAGATGATGAG-ATTACAATAACAATACCTA----------CTCTCATAGAATAGCCAGCAAGTCTCCACTAAATAACAGTGCCTTGATTTTATGGATGTTTAATCATGGATATTGAGTT-AATG----TGAACCATTTGTAGACACAGGAGTTTATTAAAGACTTGTATAATATC-TTTCAAGTATTTAGAA---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12346 506 - 126596 TTAGCACACTGT---CACTATGATGAAAAAAATTACTATAAAA-TATTTAAAAAATTTTTCCACCCTAACATTTAGAATATTCTCACATTTGTGGTTAAAACCTATTGTGATTGTTCTTAGAATTTAGAT-AAAAAATGTTCCAGAAAGTTTGAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTGAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAATTATTCAGATTCCCTCTTTGAATTCAAGTGTTTCAAAGATATCTTATTTTAAAATACCAAAATAGGAATAGAATATGAAGGGCTGGTTATGAGTAATATGATACACTTTTATGAGAGGATGAG-ATTACAATAACAATACCTC----------CTCTCATAGAATAGCCAGCAACTCTCCACTAAATAACAGTGCCTTGATTTTATAAATGTTTAATCATGGATATTGAGTT-AATG----TGAACCATTTGTAGACACAGGAGTTTATTAAAGAATTATATAATA-C-TTTCAAGTATTTAGAA---- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55736597 507 + 99891981 TTAGCACACTGT---CACTATGATGAAAAAAATTACTATAAAATTATTTTAAAAAATTTTCCACCCTGACAGTTAGAATATTCTCACATTTGTGGTT-AAACCTATTGTGATTGTTCTTAGAATTTTGAT-AAAAAATGTTCCAGAAAGTTTGAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAACTATTCAGATTCCCTCTTTGAATTCAAGTGTTTCAAAGATATCTTATTTTAAAATACCAAAATAGGAATAGAATATGAAGGGCTGGTTATGAGTAATATGATACACTTTTATGAGAGGATGAG-ATTACAATAACAATACCTC----------CTCTCATAGAATAGCCAGTAAGTCTCCACTAAATAACAGTGCCTTGATTTTATAGATGTTTAATCATGGATATTGAGTT-AATC----TGAACCATTTGTAGACACAGGAGTTTATTAAAGAATTATATAATATC-TTTGAAGTATTTAGAA---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437101 518 - 185818997 TTAGCACAATGT---CACTATGATGAAAAAAGTTACTATAAAATTATTTTTAAAACTTTTCCACCCTGACATTTAGAATATTCTCACATTTGCAGTTAAAACCTATTGTGATTATTCTTAGAATTTAGAT-AAAAAATGTTCCAGAAAGTTTGAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAACTATTCAGATTCTCTCTTTGAATTCAAGTGTTTCAAAGATATCTTATTCTAAAATACCAAAATAGGAATAGAATATGAAGGGCCAGTTATGAGTAATATGATACACTTTTATGAGAGGATGAG-ATTACAATAACAATACCTCACAATAACTGCTCTCATAGAATAGCCAGCAAGTCTCCACTAAATAACAGTGCCTTGGTTTTATAGACGTTTAATCATGGATATTGAGTT-AATC----TGAACCATTTGTAGACACAGGAGCTTATTAAAGAATTATATAATATC-TTCCAAATATTTAGAA---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67266730 518 + 192294377 TTAGCACAATGT---CACTATGATGAAAAAAGTTACTATAAAATTATTTTTAAAACTTTTCCACCCTGACATTTAGAATATTCTCACATTTGCAGTTAAAACCTATTGTGATTATTCTTAGAATTTAGAT-AAAAAATGTTCCAGAAAGTTTGAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAACTATTCAGATTCTCTCTTTGAATTCAAGTGTTTCAAAGATATCTTATTCTAAAATACCAAAATAGGAATAGAATATGAAGGGCCAGTTATGAGTAATATGATACACTTTTATGAGAGGATGAG-ATTACAATAACAATACCTCACAATAACTGCTCTCATAGAATAGCCAGCAAGTCTCCACTAAATAACAGTGCCTTGGTTTTATAGACGTTTAATCATGGATATTGAGTT-AATC----TGAACCATTTGTAGACACAGGAGCTTATTAAAGAATTATATAATATC-TTCCAAATATTTAGAA---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2748783 518 + 3123512 TTAGCACAATGT---CACTATGATGAAAAAAATTACTATAAAATTATTTTTAAAACTTTTCCACCCTGACATTTAGAATATTCTCACATTTGCAGTTAAAACCTATTGTGATTGTTCTTAGAATTTAGAT-AAAAAATGTTCCAGAAAGTTTGAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAACTATTCAGATTCTCTCTTTGAATTCAAGTGTTTCAAAGATATCTTATTCTAAAATACCAAAATAGGAATAGAATATGAAGGGCCAGTTATGAGTAATATGATACACTTTTATGAGAGGATGAG-ATTACAATAACAATACCTCACAATAACTGCTCTCATAGAATAGCCAGCAAGTCTCCCCTAAATAACAGTGCCTTGGTTTTATAGACGTTTAATCATGGATATTGAGTT-AATC----TGAACCATTTGTAGACACAGGAGCTTATTAAAGAATTATATATTATC-TTCCAAGTATTTAGAA---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469072 516 + 10077455 TTAGCACAATGT---CACTATGATGAAAAAAATTACTATAAAATTATTTTAAAAACTTTTCCACCCTGACATTTAGAATATTCTCACATTTGCAGTTAAAACCTATTGTGATTGTTCTTAGAATTTAGAT-AAAAAATGTTCCAGAAAGTTTGAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAACTATTCAGAT--TCTCTTTGAATTCAAGTGTTTCAAAGATATCTTATTCTAAAATACCAAAATAGGAATAGAATATGAAGGGCCAGTTATGAGTAATATGATACACTTTTATGAGAGGATGAG-ATTACAATAACAATACCTCACAATAACAGCTCTCATAGAATAGCCAGCAAGTCTCCACTAAATAACAGTGCCTTGATTTTATAGATGTTTAATCATGGATATTGAGTT-AATC----TGAACCATTTGTAGACACAGGAGCTTATTAAAGAATTATATAATATC-TTCCAAGTATTTAGAA---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677039 516 + 127223203 TTAGCACAATGT---CACTATGACGAAAAAAATTACTATAAAATTATTTTTAAAACTTTTCCACCCTGACATTTAGAATATTCTCACATTTGCAGTTAAAACCTATTGTGATTGTTCTTAGAATTTAGAT-AAAAAATGTTCCAGAAAGTTTGAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAACTATTCAGATTCTCTCTTTGAATTCAAGGGTTTCAAAGATATCTTATTCTAAAATACCAAAATAGGAATAGAATATGAAGGGCCAGTTATGAGTAATATGATACACTTTTATGAGAGGAAGAG-ATTACAATAACAATGTCTCACAATAACTGCTCTC--AGAATAGCCAGCAAGTCTCCACTAAATAACAGTGCCTTGATTTTATAGATGTTTAATCATGGATGTTGAGTT-AATC----AGAACCATTTGTAGACACAGGAGCTTATTAAAGAATTATATAATATC-TTCCAAGTATTTAGAA---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121269 518 - 1799296 TTAGCACAATGT---CACTATGATGAAAAAAATTACTATAAAATTATTTTAAAAACTTTTCCACCCTGACCTTTAGAATATTCTCACATTTGCAGTTAAAACCTATTGTGATTGTTCTTAGAATTTAGAT-AAAAAATGTTCCAGAAAGTTTGAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAACTATTCAGATTCTCTCTTTGAATTCAAGTGTTTCAAAGATATCTTATTCTAAAATACCAAAATAGGAATAGAATATGAAGGGTCAGTTATGAGTAATATGATACACTTTTATGAGAGGATGAG-ATTGCAATAACAATACCTCACAATAACAGCTCTCATAGAATAGCCAGCAAGTCTCCACTAAATAACAGTGCCTTGATTTTACAGATGTTTAATCATGGATATTGAGTT-AATC----TGAACCATTTGTAGACACAGGAGCTTATTAAAGAATTATATAATATC-TTCCAAGTATTTAGAA---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1719941 518 + 6934359 TTAGCACAATGT---CACTATGATGAAAAAAATTACTATAAAATTATTTTAAAAACTTTTCCACCCAGACATTTAGAATATTCTCACATTTGCAGTTAAAACCTATTGTGATTGTTCTTAGAATTTAGAT-AAAAAATGTTCCAAAAAGTTTGAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAATGGCATTTCATTGACATTTTGAAAACTATTCAGATTCTCTCTTTGAATTCAAGTGTTTCAAAGATATCTTATTCTAAAATACCAAAATAGGAATAGAATATGAAAGGCCGGTTATGAGTAATATGGTACACTTTTATGAGAGGATGAG-ATTACAATAACAATACCTCACAATAACTGCTCTCATAGAATAGCCAGCAAGTCTCCACTAAATAACAGTGCCTTGATTTTATAGATGTTTAATCATGGATATTGAGTT-AATC----TGAACCATTTGTAGACACAGGAGCTTATTGAAGAATTATATAATATC-TTCCAAGTATTTAGAA---- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108075807 508 - 128169293 ttaGCACAATAT---CACAATAATGAAAAAA-TGACTATAAAATTATTCTTTAAAATTTTCCACCCTGACGTTTAGCATATTCTTACATTTGTAGTTAAAAACGATTGTGATTTTTCTTAGGATTTAGAT-AAAATATGTTCCAGAAAGTTTTAAGAGAAGCACCTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAACAGCATTTCATTGACATTTTAAAAACCATTCAGATTCTATCTATGAATTCAAGTGTTTCAAAGATATTTTATTCTAAAATACCAAAATAGGAATTGAATATGAAGGACCGGTTATGAGTAATATGATACACTTTTATAAGAGGATGAG-ATTGCAATAACAATACCTA----------CTCTCACAGAATAGCCAGCAAGTCTCCACTAAACAGCAGTGCCCTGATTTGATAGATGTTTAATCATTGATGTTGAGTCAAACC----TGAACCATTTGTAGACACAGGGGTTTATTGAAGAATTACATAATAAC-TCTCAAGTATTTAAAA---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 697942 490 - 18371965 ttaGCACAATGT---CACAATGATGAAAAAA-TGACCATAAAATTATTCTTAAAGTTTTTCCACCCTGACATTTAGAATATTCTTACATTTGTAGTTAAAAACTACTGTGATTGTTCTTAGGATTTAGAA-AAAATATGTTCCAGAAAGTTTTAAAAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAACCATTCAGATTCTATCTATGAACTCAAGTGTTTCAAAGACCTCTTATTCTAAAATACCAAAATAGGAATAGAATATGAAGGGCTGGTTATGAGTAATATGATACACTTTTATAAAAAGATGAG-ATTACAATAACAATACCTA----------CTCTCACAGAATAGCCAGCAAGTCTCCACTAAATAGCAGTGCCCTGAT------------------TTGATGTTGAGTCAAATC----TGAACCATTTGTAGACACGGGGGTTTATTGAAGAATTACATAATAAC-TCTCTAGCATTTAAAA---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1357626 508 + 3566421 TTAGCACAATGT---CACAATGATGAAAAAA-TGACTATAAAATTATTCTTAAAATTTTTCCACCCTGACATTTAGAATATTCTTACATTTGTAGCTAAAAACTATTGTGACTGTTCTTAGGATTTAGAT-AAAATATGTTCCAGAAAGTTTTAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCACGAAGAAACGGCATTTCATTGACATTTTAAAAACCATTCAGATTCTATCTATGAATTCAAGTGTTTCAAAGATATCTTATTCTAAAATACCAAAATAGGAATAAAATATGAAGGACTGGTTATGAGTAATATGATACACTTTTATAAGAGGATGAG-ATTACAATAACAATACCTA----------CTCTCACAGAATAGCCAGCAATTCTCCACTAAATAGCAGTGCTCTGATTTGATAGACGTTTAATCACTGATGTTGAGTCAAATC----TGAATCATTTGTAGACACGGGGGTTTATTGAAGAATTACATAGTAAC-TGGCAAGTATTTAAAA---- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1863273 508 - 9267652 TTAGCACAATGT---CACAATGATGAAAAAA-TGACTATAAAATTATTCTTAAAATTTTTCCACCCTGACATTTAGAATATTCTTACATTTGCAGTTAAAAACTATTGTGATTGTTCTTAGAATTTAGAT-AAAATATGTTCCAGAAAGTTTTAAGAGAAGCACTTTAGTCAATTTTTAGTTGTTCAAGCATGAAGAAACGGCATTTCATTGACATTTTAAAAACCATTCAGATTCTATCTATGAATTCAAGTGTTTCAAAGATATCTTATTCTAAAATACCAAAATAGGAATAGAATATGAAGGGCCAGTTATGAGTAATATGATACACTTTTATAAGAGGATGAG-ATTACAATAACAATACCTA----------CTCTCACAGAATAGCCAGCAAGTCTCCACTAAACAGCAGTGCCCTGATTTGATAGACGTTTAATCATTGATGTTGAGTCAAATC----TGAACCATTTGTAGACACAGGGGTTTGTTGAAGAATTACATAATAAC-TCTCAAGTATTTAAAA---- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12690658 507 + 14340318 TTAGGACAATTT---CACTATGATGAAATTG-TGACtataaaattattttttaa-tttatCTACACTGACATTTACAATATTCTCACATTTTTAGTTGAAACCTATTGTGATTGTTCTTAGAATTTAGAT-AAAAAATGTTTCAGAAAGTTTGAAGAGAAGCACTTTAGCCAATTTTGAGTTATTCAAGCATGAAGAAATGGCATTTCATTGACATTTTAAAAACTATTCAGATTCTGTCTATGAATTCAAGTGTTTCAAACTTATCTTATTCTAAAATACCAAAATAGGAATAGAATATGAAGGGCTGGTTATGAGTAATATGATATACTTTTATGAAAGCATGGG-ATTATAATAACAATACCCG----------CTCTCATCAAATATCCAGCAAGGTTTCACTGAATTGTAGTGCCTTGATTTAATTCACGTTTAATGATAGATGTTGAGTTAAATC----TAAGCCATTTGCAGACACAAAGATATATTAAGGTATTACATAATAAC-TTTCAATTATTTATAA---- i otoGar3.GL873564 I 1 C 0 s canFam3.chr18 51726457 506 - 55844845 ATAGCACAATTT---CACTATGATGAATAAGGTGACTATAAAATTCATTTTGAAATTTATCCACCCTGACATTTACAATATTCTCACATTTGTAGCTAAAACCTATTGTGATTGTTCTTAGAATTTAGAT-AAAAAATGTTTCAGAAAGTTTGAGGAGAATAATTTGAGCCAATTTTTAGTTGTTCAAGCATGAAGAAATGGCATTTCATTGACATTTAAAAAAAAA---AGATTCTCCTTATGAATTCAAGTGTTTCAAAAATACCTTATTCTAACACACTAAATTAGGAATAGAATATGAAAGGCTGATTTTGGGTTATATGGTACATTTTTCTAAAAGCATGGG-TTTATAATAATAATAGCTG----------CTCTCAAAGAATATCCAGCAGTGTTCCAGTGAATTGCATTGCCTTGATTTGGGAGACATTTAATCATTGATATCTTATTACATT----TTTAACATTTTTAGGCAAAGGTATTTATTGAGaaattatataataat-ttttcaatatttaGAA---- i canFam3.chr18 I 1 I 4416 s dasNov3.JH578441 1129100 519 + 1446996 TTAGCACAATTCTCACAGTATGATGGAAAG--TGACTATAAAATTAATTTTGAAATGTATGCACCCTGACATTTACAAAATTCTCACATTTCTAGCTAAACCCTGTTGTGATTGTTCATAGAATTCAGAT-AAAAATTGTTTCAGAAAGTTTGGAAAGAATCATTTAGGCCAATTTTAAGTTGTTAAAGCATGACAAAATGGCATTTCATTGACATTAAGAAAACTATTCAGATTCTCTCTATGAATTCAAGTGTTTCAAAAATACCTTATTCTAAAACACCAAAATAGGAATAGAATATGAAGGCCAGGTTTTGAGTAATATGATATACTGGTATTGAAAACTCAGTCTTAAAATAACAATACTTG----------CTATTATGGAATATCTAGCAAGGGTCCACTCACTTTCAATGACTTCATTTT-TAGGTGTTTAATTACTGTTGTTGAATTGAATCCAATTAAGATTTTTCTGGACCCAAGGGAACATTGAGGAATTTTTTTATAATATTGCAGGTTTTTTGATTGCA i dasNov3.JH578441 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 982368 625 - 1121937 I e panTro5.chr1 101808816 54727 - 228573443 I a score=113919.000000 s hg38.chrUn_KI270749v1 34666 11 + 158759 TAGTGTTGAAA s panPan2.chr7 108490257 11 - 162613886 TAGTGTTGAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12852 11 - 126596 TAGTGTTGAAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737104 11 + 99891981 TAGTGTTGAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437619 11 - 185818997 TAGTGTTGAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267248 11 + 192294377 TAGTGTTGAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749301 11 + 3123512 TAGTGTTGAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469588 11 + 10077455 TAGTGTTGAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677555 11 + 127223203 TAGTGTTGAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121787 11 - 1799296 TAGTGTTGAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720459 11 + 6934359 TAGTGTTGAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076315 11 - 128169293 TAGTGCTGAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698432 11 - 18371965 CAGTGCTGAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358134 11 + 3566421 TAGTGCTGAAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1863781 11 - 9267652 TAGTGCTGAAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12691165 10 + 14340318 T-GTGATAAAA i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1129619 11 + 1446996 TAGTGATAAAA i dasNov3.JH578441 C 0 I 1925 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 982368 625 - 1121937 I e canFam3.chr18 51726963 4416 - 55844845 I e panTro5.chr1 101808816 54727 - 228573443 I a score=16800.000000 s hg38.chrUn_KI270749v1 34677 2 + 158759 TT s panPan2.chr7 108490268 2 - 162613886 TT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12863 2 - 126596 TT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737115 2 + 99891981 TT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437630 2 - 185818997 TT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267259 2 + 192294377 TT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749312 2 + 3123512 TT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469599 2 + 10077455 TT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677566 2 + 127223203 TT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121798 2 - 1799296 TT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720470 2 + 6934359 TT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076326 2 - 128169293 TT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698443 2 - 18371965 TT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358145 2 + 3566421 TT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1863792 2 - 9267652 TC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12691175 2 + 14340318 AT i otoGar3.GL873564 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 982368 625 - 1121937 I e canFam3.chr18 51726963 4416 - 55844845 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=23424.000000 s hg38.chrUn_KI270749v1 34679 3 + 158759 AAG s panPan2.chr7 108490270 3 - 162613886 AAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12865 3 - 126596 AAG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737117 3 + 99891981 AAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437632 3 - 185818997 AAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267261 3 + 192294377 AAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749314 3 + 3123512 AAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469601 3 + 10077455 AAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677568 3 + 127223203 AAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121800 3 - 1799296 AAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720472 3 + 6934359 GAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076328 3 - 128169293 AAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698445 3 - 18371965 AAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358147 3 + 3566421 AAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1863794 3 - 9267652 AAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12691177 3 + 14340318 CAT i otoGar3.GL873564 C 0 I 1 s canFam3.chr18 51731379 3 - 55844845 AAT i canFam3.chr18 I 4416 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 982368 625 - 1121937 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=-9389.000000 s hg38.chrUn_KI270749v1 34682 1 + 158759 -C s panPan2.chr7 108490273 1 - 162613886 -C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12868 1 - 126596 -C i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737120 1 + 99891981 -C i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437635 1 - 185818997 -A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267264 1 + 192294377 -A i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749317 1 + 3123512 -A i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469604 1 + 10077455 -A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677571 1 + 127223203 -A i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121803 1 - 1799296 -A i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720475 1 + 6934359 -A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076331 1 - 128169293 -C i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698448 1 - 18371965 -C i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358150 1 + 3566421 -C i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1863797 1 - 9267652 -C i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 982993 1 - 1121937 -C i tarSyr2.KE946558v1 I 625 C 0 s otoGar3.GL873564 12691181 1 + 14340318 -C i otoGar3.GL873564 I 1 I 1144 s canFam3.chr18 51731382 1 - 55844845 T- i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=69128.000000 s hg38.chrUn_KI270749v1 34683 6 + 158759 CTGCAT s panPan2.chr7 108490274 6 - 162613886 CTGCAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12869 6 - 126596 CTGCAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737121 6 + 99891981 CTGCAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437636 6 - 185818997 CTGCAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267265 6 + 192294377 CTGCAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749318 6 + 3123512 CTGCAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469605 6 + 10077455 CTGCAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677572 6 + 127223203 CTGCAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121804 6 - 1799296 CTGCAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720476 6 + 6934359 CTGCAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076332 6 - 128169293 CTGCAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698449 6 - 18371965 CTGCAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358151 6 + 3566421 CTGCAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1863798 6 - 9267652 CTGCAT i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 982994 6 - 1121937 ATGCAT i tarSyr2.KE946558v1 C 0 I 6289 s canFam3.chr18 51731383 6 - 55844845 CTGCTT i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e otoGar3.GL873564 12691182 1144 + 14340318 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=137539.000000 s hg38.chrUn_KI270749v1 34689 19 + 158759 CCCCACGATTTT-CAGCGGT s panPan2.chr7 108490280 19 - 162613886 CCCCACGATTTT-CAGAGGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12875 19 - 126596 CCCCACGATTTT-CAGCGGT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737127 19 + 99891981 CCCCATGATTTT-CAGAGGT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437642 20 - 185818997 CCACACGTTTTTTCAGAGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267271 20 + 192294377 CCACACGTTTTTTCAGAGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749324 20 + 3123512 CCACACGTTTTTTCAGAGAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469611 20 + 10077455 CCACATGTTTTTCCAGAGAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677578 20 + 127223203 CCACACGTTTTTCCAGAGAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121810 20 - 1799296 CCACACGTTTTTCCAGAGAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720482 20 + 6934359 CCCCACGTTTTTCCAGAGAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076338 20 - 128169293 CCCCACGTTTTTCCAGAGGT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698455 20 - 18371965 CCCCACGTTTTTCCAGAGGT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358157 20 + 3566421 CCCCACGTTTTTCCAGAGGT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1863804 20 - 9267652 CCCCACGTTTTTCCAGAGGT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51731389 18 - 55844845 TCCCACCTCTTTTCACAA-- i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 983000 6289 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=10500.000000 s hg38.chrUn_KI270749v1 34708 1 + 158759 G s gorGor5.CYUI01000522v1 12894 1 - 126596 G i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133437662 1 - 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267291 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749344 1 + 3123512 G i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469631 1 + 10077455 G i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677598 1 + 127223203 G i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121830 1 - 1799296 G i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720502 1 + 6934359 G i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076358 1 - 128169293 G i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698475 1 - 18371965 G i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358177 1 + 3566421 G i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1863824 1 - 9267652 G i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 989289 1 - 1121937 G i tarSyr2.KE946558v1 I 6289 I 566 s canFam3.chr18 51731407 1 - 55844845 G i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e otoGar3.GL873564 12691182 1144 + 14340318 I e dasNov3.JH578441 1129630 1925 + 1446996 I e nomLeu3.chr17 55737146 0 + 99891981 C e panPan2.chr7 108490299 0 - 162613886 C e panTro5.chr1 101808816 54727 - 228573443 I a score=123149.000000 s hg38.chrUn_KI270749v1 34709 15 + 158759 C-TGATGCCTAATAAA s panPan2.chr7 108490299 15 - 162613886 C-TGATGCTTAATAAA i panPan2.chr7 C 0 I 2 s gorGor5.CYUI01000522v1 12895 15 - 126596 C-TGATGCCTAATAAA i gorGor5.CYUI01000522v1 C 0 I 2 s nomLeu3.chr17 55737146 15 + 99891981 C-TGATGCTTAATAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437663 15 - 185818997 C-TGAAGCCTAATAAA i rheMac8.chr3 C 0 I 2 s macFas5.chr3 67267292 15 + 192294377 C-TGAAGCCTAATAAA i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 2749345 15 + 3123512 C-TGAAGCCTAATAAA i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 2469632 15 + 10077455 C-TGAAGCCTAATAAA i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 5677599 15 + 127223203 C-TGAAGCCTAATAAA i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 1121831 15 - 1799296 C-TGAAGCCTAATAAA i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 1720503 16 + 6934359 CTTGAAGCCTAATAAA i colAng1.NW_012115910v1 C 0 I 2 s calJac3.chr8 108076359 15 - 128169293 C-TGATGGCTAATAAA i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 698476 15 - 18371965 C-TGATGGCTAATAAA i saiBol1.JH378145 C 0 I 2 s cebCap1.NW_016107540v1 1358178 15 + 3566421 C-TGATGGCTAATAAA i cebCap1.NW_016107540v1 C 0 I 57 s aotNan1.NW_018514471v1 1863825 15 - 9267652 C-TGATGGCTAATAAA i aotNan1.NW_018514471v1 C 0 I 2 s canFam3.chr18 51731408 15 - 55844845 C-AGATCTCCAATAAG i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66719830 1607 - 72422247 I e tarSyr2.KE946558v1 989290 566 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=13553.000000 s hg38.chrUn_KI270749v1 34724 2 + 158759 CA s panPan2.chr7 108490316 2 - 162613886 CA i panPan2.chr7 I 2 C 0 s gorGor5.CYUI01000522v1 12912 2 - 126596 CA i gorGor5.CYUI01000522v1 I 2 C 0 s ponAbe2.chrUn 66721437 2 - 72422247 CT i ponAbe2.chrUn I 1607 I 354 s nomLeu3.chr17 55737161 2 + 99891981 CT i nomLeu3.chr17 C 0 I 2 s rheMac8.chr3 133437680 2 - 185818997 CA i rheMac8.chr3 I 2 C 0 s macFas5.chr3 67267309 2 + 192294377 CA i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 2749362 2 + 3123512 CA i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 2469649 2 + 10077455 CA i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 5677616 2 + 127223203 CA i chlSab2.chr21 I 2 C 0 s manLeu1.NW_012105809v1 1121848 2 - 1799296 CA i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 1720521 2 + 6934359 CA i colAng1.NW_012115910v1 I 2 C 0 s calJac3.chr8 108076376 2 - 128169293 CA i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 698493 2 - 18371965 CA i saiBol1.JH378145 I 2 C 0 s aotNan1.NW_018514471v1 1863842 2 - 9267652 CA i aotNan1.NW_018514471v1 I 2 C 0 s canFam3.chr18 51731423 2 - 55844845 GA i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e tarSyr2.KE946558v1 989290 566 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e cebCap1.NW_016107540v1 1358193 57 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=329319.000000 s hg38.chrUn_KI270749v1 34726 52 + 158759 ACCCCTTGCATGCCAAAATTGGCTTAAAGGTCATCTGTTACccaagctacac s panPan2.chr7 108490318 52 - 162613886 ACCCCTTGCATGCCAAAATTGGCTTAAAGCCAACCTGTTACccaagctacat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12914 52 - 126596 ACCCCTTGCATGCCAAAATTGGCTTAAAGCCCATCTGTTACccaagctacac i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737165 52 + 99891981 ACCCCTTGCATACCAAAATTGGCTTAAAGCCAATCTGTTACccaagctacac i nomLeu3.chr17 I 2 C 0 s rheMac8.chr3 133437682 52 - 185818997 ACCCCTTGAAGCTCAAAATCGGCTTAAAGCCAACCTGTTACccaagctgcac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267311 52 + 192294377 ACCCCTTGAAGCTCAAAATCGGCTTAAAGCCAACCTGTTACccaagctgcac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749364 52 + 3123512 ACCCCTTGAAGCTCAAAATCGGCTTAAAGCCAACCTGTTACccaagctgcat i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469651 52 + 10077455 ACCCCTTGAAGCTCAAAATTGGCTTAAAGCCAACCTGTTACccaaactgcgc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677618 52 + 127223203 ACCCCTTGAAGCTCAAAATTGGCTTAAAGCCAACCTGTTACccatgctgcac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121850 52 - 1799296 ACCCCTTGAAGCTCAAAATCGGCTTAAAGCCAACCTGTTACccaagctgcac i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720523 52 + 6934359 ACCCTTTGAAGCGCAAAATTGGCTTAAAGCCAACCTGTTACccaagctgcac i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076378 52 - 128169293 ACCCTTTGCATGCCAGGTTAGGCTCAAACCCAACCTGTTagccaagccaccc i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 698495 52 - 18371965 ACCCTTTGCATGTCAGATTAGGCTTAAATTCAACCTGTTagccaagctgccc i saiBol1.JH378145 C 0 I 1 s aotNan1.NW_018514471v1 1863844 52 - 9267652 ACCCTTTGCATGCCAGATTAGGCTTAAATCCAACCTGTTagccaagccgccc i aotNan1.NW_018514471v1 C 0 I 1 s canFam3.chr18 51731425 45 - 55844845 ---TCCTGCATCCCAAACCATATTTGTACTGGAcc----aaccaagcagcaa i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721439 354 - 72422247 I e tarSyr2.KE946558v1 989290 566 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e cebCap1.NW_016107540v1 1358193 57 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=1561129.000000 s hg38.chrUn_KI270749v1 34778 176 + 158759 ttcaagcatcaaggttcaaaaatgtga-ttttaaatatgcaagagtttgaggaattcactactcac---acgttcttgaacagtctatcc-aagtgcatcaagcacaatgtgagtaaagaaattttgaccaaaggattgat-------agtaatgttgaatacatttaatagtagatctaagattaaa s panPan2.chr7 108490370 176 - 162613886 ttcaagcatcaaggttcaaaaatgtaa-ttttaaatatgcaaaagtttgaggaattcactactcac---actttcttgaatagtctatcc-aagtgcatcaagcaaaatgtgagtaaagaaattttgaccaaaggattgat-------agtaatgttgaatacatttaatagtagatctaagattaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 12966 176 - 126596 ttcaagcatcaaggttcaaaaatgtga-ttttgaatatgcaagagtttgaggaattcgctactcac---actttcttgaacagtctatcc-aagtgcatcaagcaaaatgtgagtaaagaaattttgaccaaaggattgat-------agtaatgttgaatacatttaatagtagatctaagattaaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737217 174 + 99891981 ttcaagcatcaaggttcaaaaaagtaa-ttttaaatatgcaagagtttgaggaattcactactcac---actttctt-aacagtctatcc-aagtccatcaagcaaaatgtgagtaaagaaattttga-caaaggattgat-------agtaatgttgaatacgtttaatagtagatctaagattaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437734 176 - 185818997 ttcaagcatcaaggttcaaaagtgtaa-ttttaaatatgcaagagtttgaggaattcgctactcac---actttcttgaacagtctatcc-aagtgcatcaagcaaaatgtgagtagagaaattttgaccaaaggattgat-------agtaatgttgaacatatttaatagtagatctgagattaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267363 176 + 192294377 ttcaagcatcaaggttcaaaagtgtaa-ttttaaatatgcaagagtttgaggaattcgctactcac---actttcttgaacagtctatcc-aagtgcatcaagcaaaatgtgagtagagaaattttgaccaaaggattgat-------agtaatgttgaacatatttaatagtagatctgagattaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749416 176 + 3123512 ttcaagcatcaaggttcaaaagtgtaa-ttttaaatatgcaagagtttgaggaattcgctactcac---actttcttgaacagtttatcc-aagtgcatcaagcaaaatgtgagtagagaaattttgaccaaaggattgat-------agtaatgttgaacatatttaatagtagatctgagattaaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469703 162 + 10077455 ttcaagcatcagggttcaaaaatgtaa-ttttaaatatgcaagagtttgaggaattcgctgctcac---actttcttgaacagtctatcc-aagtgcatcaagcaaaatgtgagtagagaa--------------attgat-------agtaatgttgaacatatttaatagtagatctgagattaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677670 176 + 127223203 ttcaagcatcaaggttcaaaaatgtaa-ttttaaatatgcaagagttcgaggaattcgctgctcgc---actttcttgaacggtctatcc-aagtgcatcaagcaaaatgtgagcagagaaattttgaccaaaggattgat-------agtaatgttgaaaatatttaatagtagatctgacattaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1121902 176 - 1799296 ttcaagcatcaaggttcaaaagtgtaa-ttttaaatatgcaagagtttgaggaattcgctactcac---actttcttaaacagtctatcc-aagtgcatcaagcaaaatgtgagtagagaaattttgaccaaaggattgat-------agtaatgttgaacatatttaatagtagatctaagattaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720575 176 + 6934359 ttcaagcatcaaggttcaaaaatgtaa-ttttaaatatgcaagagtttgaggaattcgctactcac---actttcttgaacagtctatcc-aagtgcatcaagtaaaatgttagtagagaaattttgaccaaaggattgat-------agtaatgttgaacatatttaatagtagatctaagattaaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076431 183 - 128169293 tttgagcatcagggttaaaaagtgtaa-ttttaaatatgcaagagtttgtggaatttgctactcgt---actttcttgaacagtctaccc-aagtgcatcaagcaaaatatgagtagagaaatttcaacaaaaggattgattacattcaatagtattgaatacattcaataatagatctgagattgaa i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 698548 177 - 18371965 ttcaagcatctagggtaaaaagggtaatttttaaatatgcaagagtttgtggaattcgctgctcac---actttcttgaacgatttaccc-aagtgcatcgagcaaaatataagtagagaaattttgataaaaggattgat-------aatagtattgaatacgttctctagtagatctgagattaaa i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1358250 176 + 3566421 ttcgagcatcaaggttaaaaagtgtaa-ttttaagtatgcaagagtttgtggaattcgccactcac---actttcttgaacagtctaccc-aagtgcatcaagcaaaatatgcataaagaaattttgataaaaggtttgat-------aatagtattgaatatattcaataatagatctgagattaaa i cebCap1.NW_016107540v1 I 57 I 11 s aotNan1.NW_018514471v1 1863897 176 - 9267652 tttgagcgtcaaggttaaaaagtgcaa-ttttaagtatgcaagagtttgtggaattcactactcac---actttcttgaacagtctacct-aagtgcatcaagcaaaatatgagtagaaaaattttgataaaaggattgat-------agtagtattgaatacattcaataatagatctgagattgaa i aotNan1.NW_018514471v1 I 1 C 0 s canFam3.chr18 51731470 178 - 55844845 -ttaagcaacaaggctaatgagtgtag-ttttaaacatgcaaaaatttgagaaattatatattcattagacttttctaaagagtctattagaatttcatgaagtatgatgtgaggtggtgaatttt-atgaaatgattaat-------ggtaatattgagtatacttaatagtagatctaagattaaa i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721439 354 - 72422247 I e tarSyr2.KE946558v1 989290 566 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=145419.000000 s hg38.chrUn_KI270749v1 34954 18 + 158759 aggtgaaagtgagggtga s panPan2.chr7 108490546 18 - 162613886 aggtgagagtgagggtga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13142 18 - 126596 aggtgaaagtgagggtga i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737391 18 + 99891981 agatgagagtgagggtga i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437910 18 - 185818997 aggtgagagtgagggtgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267539 18 + 192294377 aggtgagagtgagggtgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749592 18 + 3123512 aggtgagagtgagggtgg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469865 18 + 10077455 aggtgagagtgagggtgg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677846 18 + 127223203 aggtgagagtgagggtgg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1122078 18 - 1799296 aggtgagagtgagggtgg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720751 18 + 6934359 aggtgagagtgacggtgg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076614 18 - 128169293 aggtgagagtgagggtgg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698725 18 - 18371965 aggtgggagtgagggtgg i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1864073 18 - 9267652 aggtgagagggagggtgg i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51731648 17 - 55844845 tggtgcaa-taagagtgg i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721439 354 - 72422247 I e tarSyr2.KE946558v1 989290 566 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e cebCap1.NW_016107540v1 1358426 11 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=852951.000000 s hg38.chrUn_KI270749v1 34972 106 + 158759 gaagagtgtatgaatgttttgtgttctgacaaagagaaTGTAGCAC-CCAGGTCCTACCTGCTTGGAGGCATTGCCAGTGCCCACGGTAGGCCATTTTATCCAGGTT s panPan2.chr7 108490564 106 - 162613886 gaagagtgtatgaatgcttcgtgttctgacaaagagaaTGTAGCAC-CCATATCCTACCTGCTTGGTTGCATTGCCAGTGCCCACGGTAGGCTATTTTATCCAGGCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13160 106 - 126596 gaagactgtgtgaatgctttgtgttctgacagagagaaTGTAGCAC-GCAGGTCCTACCTGCTTGGATGCATTGCCAGTGCCCACGGTAGGCCATTTTATCCAGGAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737409 106 + 99891981 gaagagtgtatgaatgcttcgtgttctgacaaaaagaaTGTAGCAC-CCATGTCCTACCTGCTTGGTTGCATTGTCAGTGCCCACGGTAGGCTATTTTATCCAGGTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133437928 105 - 185818997 gaagagtgta-gaatgcttcatgttctgacaaagagaaTGTAGTAC-ACATGTCCTACCTGCGTGGTTGCATTGCCAGTGCCCACAGTAGGCtattttatccgggtt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267557 105 + 192294377 gaagagtgta-gaatgcttcatgttctgacaaagagaaTGTAGTAC-ACATGTCCTACCTGCGTGGTTGCATTGCCAGTGCCCACAGTAGGCTATTTTATCCGGGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749610 106 + 3123512 gaagagtgtatgaatgcttcatgttctgacaaagagaaTGTAGTAC-ACATGTCCTACCTGCTTGGTTGCATTGCCAGTGCCCACAGTAGGCTATTTTATCCGGGTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469883 106 + 10077455 gaagagtgtatgaatgcttcatgttctgacaaagagaaTGTAGTAC-ACATGTCCTACCTGCTTGGTTGCATTGCCAGTGCCCACAGTAGGCTATTTTATCCAGGtt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677864 106 + 127223203 gaagagtgtatgaatgcttcctgttctgacaaagagaaTGTAGTAC-ACATGTCCTACCTGCTTGGTTGCATTGCCAGTGCCCACAGTAGGCTATTTTATCCAGGtt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1122096 106 - 1799296 gaagagtatatgaatgcttcatgttctgacaaagagaaTGTAGTAC-ACATGTCCTACCTGCTTGGTTGCATTGCCAGTGCACACAGTAGGCTATTTTATCTAGAtt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720769 106 + 6934359 gaagagtgtatgaatggttcatgttctggcgaagagaatgtagtgc-aCATGTCTTACCTGCTTGGTTGCATTGCCAGTGCTCACAGTAGGCTATTTTATCCAGGTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076632 107 - 128169293 gactagtgtgtgaatgctccccgttctgacaaagagaaTGTAGTACCCCATGTCCTACCTGCTTGGTTGCGTTGCCAAAGTCCACAGTAGGCTATTTTATTCAGGTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698743 106 - 18371965 gcctagcgtgcgaaggcttcctgttctgac-aGGAGAATGTAGTACCCCATGTGCTACCTGCTTGGTGGCATTGCCAATGTCCATGGTAGGCTATTTTATTCAGGTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358437 107 + 3566421 GACTTGTGTGTGAAGGCTTCCTGTTCTGACAAAGAGAATGTAGTACCCCATGTCCTGCCTGCTTGGTTGCATTGCCAATGTCCGTGGTAGGCTATTTTATTCAGGTT i cebCap1.NW_016107540v1 I 11 C 0 s aotNan1.NW_018514471v1 1864091 107 - 9267652 gactagtgtgtgaaggcttcctgttctgacaaggagaaTGTAGTACTCCATGTCCTACCTGCTTGGTTGCATTGCCAATGTCCATGGTAGGCTATTTTATTCAGGTT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51731665 89 - 55844845 aaagagtatgtaaat-ttaaatgttctgac--agagAATGTAGTACCTCATGTCCTTTGGGCTTGGTGGAACT-CCAACGCCTGCAGT----CACTT---------- i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721439 354 - 72422247 I e tarSyr2.KE946558v1 989290 566 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=10920.000000 s hg38.chrUn_KI270749v1 35078 1 + 158759 T s panPan2.chr7 108490670 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13266 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66721793 1 - 72422247 T i ponAbe2.chrUn I 354 I 12 s nomLeu3.chr17 55737515 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438033 1 - 185818997 t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267662 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749716 1 + 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469989 1 + 10077455 t i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677970 1 + 127223203 t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1122202 1 - 1799296 t i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720875 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076739 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698849 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358544 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1864198 1 - 9267652 T i aotNan1.NW_018514471v1 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e tarSyr2.KE946558v1 989290 566 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e canFam3.chr18 51731754 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=9555.000000 s hg38.chrUn_KI270749v1 35079 1 + 158759 T s panPan2.chr7 108490671 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13267 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737516 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438034 1 - 185818997 t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267663 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749717 1 + 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469990 1 + 10077455 t i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677971 1 + 127223203 t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1122203 1 - 1799296 t i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720876 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076740 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698850 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358545 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1864199 1 - 9267652 T i aotNan1.NW_018514471v1 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721794 12 - 72422247 I e tarSyr2.KE946558v1 989290 566 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e canFam3.chr18 51731754 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=21840.000000 s hg38.chrUn_KI270749v1 35080 2 + 158759 TA s panPan2.chr7 108490672 2 - 162613886 TA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13268 2 - 126596 TA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66721806 2 - 72422247 TA i ponAbe2.chrUn I 12 I 708 s nomLeu3.chr17 55737517 2 + 99891981 TA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438035 2 - 185818997 ta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267664 2 + 192294377 TA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749718 2 + 3123512 TA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469991 2 + 10077455 ta i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677972 2 + 127223203 ta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1122204 2 - 1799296 ta i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720877 2 + 6934359 TA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076741 2 - 128169293 TA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698851 2 - 18371965 TA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358546 2 + 3566421 TA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1864200 2 - 9267652 TA i aotNan1.NW_018514471v1 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e tarSyr2.KE946558v1 989290 566 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e canFam3.chr18 51731754 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=1130423.000000 s hg38.chrUn_KI270749v1 35082 188 + 158759 Gg-----------ttt--tgttttgtt----ttgttttgt---------tttTTTC-----------------TTTTCAGGAGAGTTAGTCCAAGACCAATAACTCCATAACTGGTAGATTTGGAAGACTTTAATACTGCTTAACATTTTGTACATAGCTTTATAACAGT----------------------TTTCTTTTTCTTTT-TT-TCTGAGAGATTCTTTTCAATA-----TAACCCATCATGGTTGAACTA-AAA--- s panPan2.chr7 108490674 189 - 162613886 Gg-----------tttg-ttttttgtt----tgtttgttt---------gtttttc-----------------ttttCAGGAGAGTTAGTCCAAGACCAATAACTCCATAACTGGTAGAATTGGAAGATTTTAATAGTGCTTAACATTTTGTACATAGCTTTATAACAGT----------------------TTTCTTTTTCTTTT-TT-TCTGAGACATTCTTTTCAATA-----TATCCCATCATGGTTGTACTC-AAA--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13270 181 - 126596 GG-----------TTT--GGTTTTGTT------------T---------TCTTTTC-----------------TTTTCAGGAGAGTTAGTCCAAGACCAATAACTCCATAACTGGTAGATTTGGACGACTTTAATAGTGCTTAACATTTTGTACATAGCTTTATAACAGT----------------------TTTCTTTTTCTTTT-TT-TCTGAGAGATTCTTTTCAATA-----TACCCCATCATGGTTGAACTCAAAA--- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737519 193 + 99891981 Gg-----------tttg-ttttttgtttgtttgtttgttt---------gtttTTC-----------------TTTTCAGGAGAGTTAGTCCAAGACTAATAACTCCATAACTGATAGAATTGGAAGATTTTAATAGTGCTTAACATTTTGTACATATCTTTATAACAAT----------------------TTTCTTTTTCTTTT-TT-TCTGAGAGATTATTTTCAATA-----TACCCCACCATGGTTGAACTC-AAA--- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438037 169 - 185818997 ag-------------------------------------t---------ttttttc-----------------tttgcaggagagttagttcaagaccagtaactccataactggtagaactggaagactTTAATAGTGCTTAACATTTTGTACATAGCTTTATAACAGT----------------------TTTCTTTTCTTTTTGTT-TTTGAGAGATTCTTTTCAATA-----TACCCCATCATGGTTGAACTC-AAA--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267666 170 + 192294377 AG------------------------T------------T---------TTTTTTC-----------------TTTGCAGGAGAGTTAGTTCAAGACCAGTAACTCCATAACTGGTAGAACTGGAAGACTTTAATAGTGCTTAACATTTTGTACATAGCTTTATAACAGT----------------------TTTCTTTTCTTTTTGTT-TTTGAGAGATTCTTTTCAATA-----TACCCCATCATGGTTGAACTC-AAA--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749720 170 + 3123512 AG------------------------T------------T---------TTTTTTC-----------------TTTTCAGGAGAGTTAGTTCAAGACCAGTAACTCCATAACTGGTAGAACTGGAAGACTTTAATAGTGCTTAACATTTTGTACATAGCTTTATAACAGT----------------------TTTCTTTTCTTTTTGTT-TTTGAGAGATTCTTTTCAATA-----TACCCCATCATGGTTGAACTC-AAA--- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2469993 187 + 10077455 gtt---gttgtttttt--ttttctttt------------t---------tcttttt-----------------ctttCAGGAGAGTTAGTTGAAGACCAGTAACTCCATAACTGGTAGAACTGGAAGACTTTAATAGTGCTTAACATTTTGTACATAGCTTTATAACTGT----------------------TTTCTTTTTCTTT--TT-TTTGAGAGATTCTTTTCAATA-----TACCCCATCATGGTTGAACTC-AAA--- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5677974 179 + 127223203 ag-----------ttt--ttttctttt------------t---------ttttttt-----------------tttCCAGGGGAGTTAGTTCAAGACCAATAACTCCATAACTGGTAGAACTGGAAGACTTTAATAGTGCTTAACATTTTGTACATAGCTTTATAACAGT----------------------TTTATTTTTCTTT--TT-TTTGAGAGATTCTTTTCAATA-----TACCCCATCATGGTTGAACTC-AAA--- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1122206 176 - 1799296 ag-----------ttt--ttttttttt------------t---------ttttttt-----------------tttC----AGAATTAGTTCAAGACCAATAACTCCATAACTGGTAGAACTGGAAGACTTTAATAGTGCTTAACATTTTGTACATAGCTTTATAACAGT----------------------TTTCTTTTTCTTT--TTCTTTGAGAGATTCTTTTGAATG-----TACCCCATCATGGTTGAACTC-AAA--- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1720879 190 + 6934359 AGTTGCtttttttcct--ttttttttt------------c---------ttttttt-----------------ttttcAGAAGAGTTAGTTCAAGACTAATAACTCCGTAACTGGTAGAACTGGAAGACTTTAATAGTGTTTAACATTTTGTACATAGCTTTATAACAGT----------------------TTTCTTTTACTTT--TT-TTTGAGAGATTCTTTTCAATA-----TACCCCATGATGGTTGAACTC-AAA--- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076743 183 - 128169293 ----------------AGTTGTTTTTT------------TGTTGTTGTCTTTGTTT-----------------TTTTCAGGAGAGTTAGTCCAAGACCAGTAGCTCTGTAACTAGTAGAAGTGGAAGACTTTAATCATGCTTAACATTTTGTGCATAGCATTATAAGAG------------------------ATTGTTTTCTTAT-TT-TATGAGAGATTCTTTTCAATA-----TACCCCAT-ATGATTGAACTC-AAA--- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 698853 178 - 18371965 ----------------AGTTGTTTTTT------------TGTT------TTTTGTT-----------------TTTTCAGGAAAGTTAGTCCAAGACCAGTAATTCTGTAACTAGTAGAAGTGGAAGACTTTAATCATGCTTAACATTTTGTGCATAGCTTTATAAGAGT----------------------TTTTTTTTTCTTAT-TT-GATGCGAGATTCTTTCC-ATA-----TACCCCAT-ACGATTGAACTC-AAA--- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358548 166 + 3566421 ----------------AGTTGTTGTTT------------T--------------TT-----------------TATTCAGGAGAGTTAGTCCAAGACCAGTAACTCTGTAACTAGTAGAAGTGGAAGACTTTAATCATGCTTAACATTTTGTGCATAGCTTTATAGGAG---------------------------ATTTTTTTAT-TT-TATGAGAGACTCTTTTCCATG-----TACCCCAT-ATGATTGAACTC-AAA--- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1864202 174 - 9267652 ----------------AGTTGTTGTTG------------T---------TTTTTTT-----------------TTTTCAGGAGAGTTAGTCCAAGACCAGTAACTCTGTAACTAGTAGAAGTGGAAGACTTTAATCATGCTTAACATTTTGTGCATAGCTTTATAAAAG------------------------ATTTTCTTTTTAT-TT-TATGAGAGATTCTTTTCAATA-----TACCCCAT-ATGATTGAACTC-AAA--- i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51731754 212 - 55844845 -------------------GTTTCGTT------------T---------ATTTTGTGCGCCTTTTATAGATGGTTTTTGTCAAGGTTGGCCCAACA----TAACCACAAGAGTGCCAGAATGGGGAGATCGTATTATCGCTTAATGTCTACTGCATAGCTT----ACGGTGTTTGGTTTGGTTTTGGTTTTGGTTCTGTTTCTCT--TT-TCTGAGAGACTTACTCCACCATATGCTACCCCATAACGATACAAATG-ACACAA i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 989290 566 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=12806.000000 s hg38.chrUn_KI270749v1 35270 3 + 158759 -AAC s panPan2.chr7 108490863 3 - 162613886 -GTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13451 3 - 126596 -ATC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737712 3 + 99891981 -GTC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438206 3 - 185818997 -GTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267836 3 + 192294377 -GTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749890 3 + 3123512 -GTC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2470180 3 + 10077455 -GTC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5678153 3 + 127223203 -ATC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1122382 3 - 1799296 -GTC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1721069 3 + 6934359 -GTC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076926 3 - 128169293 -GTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 699031 3 - 18371965 -GTC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358714 3 + 3566421 -GTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1864376 3 - 9267652 -GTC i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 989856 2 - 1121937 -GT- i tarSyr2.KE946558v1 I 566 I 182 s canFam3.chr18 51731966 3 - 55844845 Cat- i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e otoGar3.GL873564 12691182 1144 + 14340318 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=188601.000000 s hg38.chrUn_KI270749v1 35273 24 + 158759 AATGCTTATTTAAAATCTACAACT-------- s panPan2.chr7 108490866 24 - 162613886 ACTCCTTATTTAAAATCTACAACT-------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13454 24 - 126596 ATTGCTTATTTAAAATCTACAACT-------- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737715 24 + 99891981 ACTGCTTATTTAAAATCTACAACT-------- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438209 24 - 185818997 ACTGCGTATTTAAAATCTACAGCT-------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267839 24 + 192294377 ACTGCGTATTTAAAATCTACAGCT-------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749893 24 + 3123512 ACTGCGTATTTAAAATCTACAGCT-------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2470183 24 + 10077455 ACTGGGTATTTAAAATCTACAGCT-------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5678156 24 + 127223203 ATTGCATATTTAAAATCTACAGCT-------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1122385 24 - 1799296 ACTGCGTATTTAAAATCTACAGCT-------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1721072 24 + 6934359 ACTGCGTATTTAAAATCTATAGCT-------- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076929 24 - 128169293 ATTGCTTATTTAAAATCTACAGCT-------- i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 699034 24 - 18371965 ATTGCTTATTTAAAATCTACAGCT-------- i saiBol1.JH378145 C 0 I 3 s cebCap1.NW_016107540v1 1358717 24 + 3566421 ATTGTTTATTTAAAATCTACAGCT-------- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1864379 24 - 9267652 ATTGCTTATTTAAAATCTACAGCT-------- i aotNan1.NW_018514471v1 C 0 I 19 s canFam3.chr18 51731969 25 - 55844845 ------cattt-taatgtgcaaatatgccatg i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 989858 182 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=60091.000000 s hg38.chrUn_KI270749v1 35297 16 + 158759 GCTG-ACGT--TTTGTAAC s panPan2.chr7 108490890 16 - 162613886 GCTG-ACAT--TTTGTATC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13478 16 - 126596 GCTG-ACGT--TTTGTAAC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737739 16 + 99891981 GCTG-ATGT--TTGGTATG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438233 16 - 185818997 GCTG-ACAT--TTtgtatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67267863 16 + 192294377 GCTG-ACAT--TTTGTATC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2749917 16 + 3123512 GCTG-ACAT--TTtgtatc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2470207 16 + 10077455 GCTG-ACAT--TTtgtatc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5678180 16 + 127223203 GCTG-ACAT--TTtgtatc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1122409 16 - 1799296 GCTG-ACAT--TTtgtatc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1721096 16 + 6934359 GCTG-ACAT--TTtgtatc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108076956 16 - 128169293 GCTt-gtctcctttgca-- i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 699061 16 - 18371965 GCTt-gtctcctttgca-- i saiBol1.JH378145 I 3 C 0 s cebCap1.NW_016107540v1 1358741 16 + 3566421 GCTt-gtctcctttgca-- i cebCap1.NW_016107540v1 C 0 C 0 s canFam3.chr18 51731994 17 - 55844845 actgtgcct--tctttacc i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 989858 182 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e aotNan1.NW_018514471v1 1864403 19 - 9267652 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=1023925.000000 s hg38.chrUn_KI270749v1 35313 125 + 158759 GTTCGcattccaggtaattggttttttgtgcattttctgtatttttctccattagtctacctagatatttgttagatttaatattttaatatttttctgaaaaagtgagcttttgcatttttaaa s panPan2.chr7 108490906 125 - 162613886 CTTCGCATTCCAGGTAATTGGTTTTTTGTACATTTTCTGTATTTTTCTCCATCAGTCTACCTAGATATTTCTTAGATTTAATATTTTAATATTTTTCTGAAAAAGAGAGCTTTTGCATTTTTAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13494 125 - 126596 CTTCGCATTCCAGGTAATTGGTTTTTTGTGCATTTTCTGTATTTTTCTCCATCAGTCTACCTAGATATTTGTTAGATTTAATATTTTAATGTTTTTCTGAAAAAGTGAGCTTTTGCATTTTTAAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737755 125 + 99891981 Cttctcattccaggtaattggttttttgtgcattttctgtatttttctccatcagtctacctagatatttgttagatttaatattttaatatttttctgaaaaagtgagcttttgcagttttaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438249 125 - 185818997 cttcgcattccaggtaattggttatttgtgcattttctctatttttctccatcagcctacctagatatttgttagatttaatattttaatatttttctgagaaAGTGAGTTTTTGAATTTTTAAA i rheMac8.chr3 C 0 I 451 s macFas5.chr3 67267879 125 + 192294377 CTTCGCATTCCAGGTAATTGGTTATTTGTGCATTTTCTCTATTTTTCTCCATCAGCCTACCTAGATATTTGTTAGATTTAATATTTTAATATTTTTCTGAGAAAGTGAGTTTTTGAATTTTTAAA i macFas5.chr3 C 0 I 451 s macNem1.NW_012011522v1 2749933 125 + 3123512 cttcgcattccaggtaattggttatttgtgcattttctctatttttctccatcagcctacctagatatttgttagatttaatattttaatatttttctgagaaAGTGAGTTTTTGAATTTTTAAA i macNem1.NW_012011522v1 C 0 I 455 s cerAty1.NW_012000909v1 2470223 125 + 10077455 cttcgcattccaggtaattggttatttgtgcattttctctatttttctccatcagtctacctagatatttcttagatttaatattttaatattttTCTGACAAAGTGAGTTTTTGAATTTTTAAA i cerAty1.NW_012000909v1 C 0 I 460 s chlSab2.chr21 5678196 125 + 127223203 cttcacattccaggtaattggttatttgtgcattttctctatttttctccatcagtctacctagatatttgttagatttaATATTTTAACATTTTTCTGAGAAAGTGAGTTTTTGAATTTTTAAA i chlSab2.chr21 C 0 I 474 s manLeu1.NW_012105809v1 1122425 125 - 1799296 cttcgcattccaggtaattggttatttgtgcattttctctatttttctccatcagtctacctagatatttgttagatttaaaattttaatatttttctgagaaAGTGAGTTTTTGAATTTTTAAA i manLeu1.NW_012105809v1 C 0 I 449 s colAng1.NW_012115910v1 1721112 125 + 6934359 cttcgcattccaggtaattggttatttgtgcattttctctatctttctccatcagtctacctagatatttgttagatttaatattttaatatttttctgagaaAGTGAGTTTTTGAATTTTTAAA i colAng1.NW_012115910v1 C 0 I 459 s calJac3.chr8 108076972 117 - 128169293 ttttgcattccaaataattggctatttatatattctctgtatttttctccatcagtgcacccagatatttgtcaga--------tttaatgttcttctgaaaaagtgagcttttgaatttTTAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 699077 117 - 18371965 tttcgcgttccaaataattggttacttatgtattctctgtatttttctgcatcagtacacctagatatttgtcaga--------tttaatattcttctgaaaaagtgagcttttgaatttTTAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358757 117 + 3566421 ttttgcattccaaataattggctatttatgcattctctgtatttttctccatcagtgcacctagatatttgtcaga--------tttaatattcttctgaaaaagtgagcttttgaatttTTAAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1864422 117 - 9267652 TTTTGCATTCCAAATAATTGGTTACTTATGTATTCTCTGTATTTTTCTCCATCGGTGCACGTAAATATTTGTCAGA--------TTTAATATTATTCTGAAAAAGTGAGCTTTTAAATTTTTAAA i aotNan1.NW_018514471v1 I 19 C 0 s canFam3.chr18 51732011 102 - 55844845 ------gttccagttaa-tggttgcttgagaattttcttcatgtatcttcactagtcttgctag--------tggattctttgctttattattattatcaaag--------tttgaatttttcaa i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 989858 182 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e dasNov3.JH578441 1129630 1925 + 1446996 I e panTro5.chr1 101808816 54727 - 228573443 I a score=10842.000000 s hg38.chrUn_KI270749v1 35438 5 + 158759 tatat s panPan2.chr7 108491031 5 - 162613886 TATAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13619 5 - 126596 TATAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737880 5 + 99891981 tatat i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077089 5 - 128169293 CATAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 699194 5 - 18371965 CATAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1358874 5 + 3566421 CATAT i cebCap1.NW_016107540v1 C 0 I 460 s aotNan1.NW_018514471v1 1864539 5 - 9267652 CATAT i aotNan1.NW_018514471v1 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 989858 182 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e canFam3.chr18 51732113 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=20684.000000 s hg38.chrUn_KI270749v1 35443 17 + 158759 acccagttgctttaa-tt s panPan2.chr7 108491036 18 - 162613886 ACTCAATTGCTTTAATTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13624 17 - 126596 ACTCAGTTGCTTTAA-TT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737885 18 + 99891981 actcagttgctttaattt i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077094 17 - 128169293 GGTCAGTTGTTCTAA-TT i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 699199 17 - 18371965 GGTCAGTTGTTCTAA-TT i saiBol1.JH378145 C 0 I 1 s aotNan1.NW_018514471v1 1864544 17 - 9267652 GGTCAGTTGTTCTAA-TT i aotNan1.NW_018514471v1 C 0 I 41 s canFam3.chr18 51732113 8 - 55844845 ---------ctttta-tt i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 989858 182 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1358879 460 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=4090.000000 s hg38.chrUn_KI270749v1 35460 4 + 158759 ctgt s panPan2.chr7 108491054 4 - 162613886 CTGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13641 4 - 126596 CGGC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737903 4 + 99891981 ctgc i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077112 4 - 128169293 CTGC i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 699217 4 - 18371965 CTGC i saiBol1.JH378145 I 1 C 0 s canFam3.chr18 51732121 4 - 55844845 ttat i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 989858 182 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1864561 41 - 9267652 I e cebCap1.NW_016107540v1 1358879 460 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=23539.000000 s hg38.chrUn_KI270749v1 35464 17 + 158759 tttttcgtgtactattt s panPan2.chr7 108491058 17 - 162613886 TTTTTCATGTACAATTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13645 17 - 126596 TTTTTCGTGTACTATTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737907 17 + 99891981 tttttcatgtactattt i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077116 17 - 128169293 CTCTTTATGTATTATTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 699221 17 - 18371965 CTCTTTATGtattattt i saiBol1.JH378145 C 0 C 0 s tarSyr2.KE946558v1 990040 17 - 1121937 tttttcaaaaaatattt i tarSyr2.KE946558v1 I 182 I 5968 s canFam3.chr18 51732125 17 - 55844845 ttttaaagattttattt i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1864561 41 - 9267652 I e cebCap1.NW_016107540v1 1358879 460 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=-19720.000000 s hg38.chrUn_KI270749v1 35481 22 + 158759 cctcgttt-----tttttttttttttg s panPan2.chr7 108491075 5 - 162613886 CCTC----------------------C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13662 27 - 126596 CCTCGTTTTTGTGTTGTTGtttttttt i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737924 15 + 99891981 cctccttt------------atttatt i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077133 19 - 128169293 AATTAAtt-----ctttttttttt--- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 699238 4 - 18371965 aa--------------------tt--- i saiBol1.JH378145 C 0 C 0 s canFam3.chr18 51732142 1 - 55844845 ----a---------------------- i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1864561 41 - 9267652 I e cebCap1.NW_016107540v1 1358879 460 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=23940.000000 s hg38.chrUn_KI270749v1 35503 19 + 158759 ttttttttttgacacggag s panPan2.chr7 108491080 19 - 162613886 tttgttttttgagacggag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13689 19 - 126596 ttttttttttgacatggag i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737939 19 + 99891981 ttttttttttgagatggag i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077152 19 - 128169293 ttttttttttgagacagaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 699242 19 - 18371965 cttttaaaaaaaaaaaaaa i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1864602 19 - 9267652 ttttttttttgagacagag i aotNan1.NW_018514471v1 I 41 C 0 s canFam3.chr18 51732143 16 - 55844845 ---tttatttgagagagag i canFam3.chr18 C 0 I 182 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1358879 460 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=349237.000000 s hg38.chrUn_KI270749v1 35522 253 + 158759 tctttctctgttgcccaagctggagtgcagtcgcgtgatctctactcactgcaatttccaccccccacgttcaagcaattctcccacctcagcctcccgagtagctgggattacagatgcatgccaccatgccaggctaatttttgtatatttagtagatagtgggtttcaccatgttagaccaggctggtctcgaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgctgggattacagg s panPan2.chr7 108491099 253 - 162613886 tcttgctctgtagcccaagcttgagtgcaatggcgtgatctctatttactgcaacctccacctcccaggttcaagcaattctcccacctcagcctcccgagtagctgggattacaggtgcatgccaccacactaggctaatttttgtatatttagtagagagcaggtttcaccatgttggaccaggctggtctcgaacacctgacctcaggtgatccacctgcctcggcctcccaaagtgctgggattacagg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13708 253 - 126596 tcttgctctgtcacccaagctggagtgcagtcgcgtgatctctacttactgcaacttccaccccccacgttcaagcaattctcccacctcagcctccagagtagctgggattacagatgcatgccaccttgccaggctaatttttgtatatttagtagagagtgggtttcaccatgtttgaccaggctggtctcgaactcctgacctcaggtgatccacctgcctcggcctcccaaagtgctgggattacagg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55737958 253 + 99891981 tcttgctctgtcgcccaagcttgagtgcagtggcgtgatctctactcactgcaacctccacctcccagatttaagcaattctaccacctcagcgtctccagtagctgggattacaggtgcatgccaccacacaaggctaatttttgtatctttagtagaaagcgggtttcaccatattggaccaggctggtctcgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacagg i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077171 253 - 128169293 tctcactctgtctcccaggctggagtgcagtggtgtgatcttggctcagagcaacctctgcctcctgggttgaaacgattctcttccctcagcctcctgagtagctgggattacaggcctgcaccaccacgcctggctaaattttgtatttttcgtagaggcagagtttcaccatgttgaacgaggctagtctcgaactccagacttcaagtgatctgccagcctcagcctcccaaagtgctggtattacagg i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 699261 210 - 18371965 aCAGTctctgtctcccaggctggagtgcagtggtgtgatctcagctcagagcaacctctgcctcctgggtt------------------------------------------caggcctgtgccactacgcctggctaaattttgtatttttagtagaggcagagtttcaccatgttgaactaggctagtctcgaactcctgacttcaagtgatctgcctgcc-cggcctcccaaagtgctggtgttacagg i saiBol1.JH378145 C 0 I 3 s aotNan1.NW_018514471v1 1864621 253 - 9267652 tctcactctgtctcccaggctggactgcagtggtgtgatctcggctcagagcaacctctgcctcctgggttcaagcgattttcttgcctcagcctcccgagtagctgggattacaggcccacgcaaccatgcctggctaaattttgtatttttagtagacgtggagtttcaccatgttgaactaggctagtctcgaactcctgacttcaggtgatctgcctgcctcggcctcccaaagtgctggtattacagg i aotNan1.NW_018514471v1 C 0 I 26 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1358879 460 + 3566421 I e canFam3.chr18 51732159 182 - 55844845 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=13412.000000 s hg38.chrUn_KI270749v1 35775 19 + 158759 agtgaaccatggcgcctcg s panPan2.chr7 108491352 19 - 162613886 cgtgaaccatggtgcctgg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13961 19 - 126596 cgtgaacaatggcgcctgg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738211 19 + 99891981 catgaaccatggcgcctgg i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077427 19 - 128169293 gatgagccactgtttccgg i calJac3.chr8 I 3 I 4 s saiBol1.JH378145 699474 19 - 18371965 gatgagacactgtgcccgg i saiBol1.JH378145 I 3 I 4 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1864874 26 - 9267652 I e cebCap1.NW_016107540v1 1358879 460 + 3566421 I e canFam3.chr18 51732159 182 - 55844845 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=9988.000000 s hg38.chrUn_KI270749v1 35794 9 + 158759 ctatctcct s panPan2.chr7 108491371 9 - 162613886 cTATTTCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13980 9 - 126596 cTACCTCCT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738230 9 + 99891981 ctatttcgt i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077450 9 - 128169293 CTATTTCCT i calJac3.chr8 I 4 C 0 s aotNan1.NW_018514471v1 1864900 9 - 9267652 CTATTTCCT i aotNan1.NW_018514471v1 I 26 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1358879 460 + 3566421 I e canFam3.chr18 51732159 182 - 55844845 I e dasNov3.JH578441 1129630 1925 + 1446996 I e saiBol1.JH378145 699493 4 - 18371965 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=7679.000000 s hg38.chrUn_KI270749v1 35803 6 + 158759 tcattc s panPan2.chr7 108491380 6 - 162613886 TCATTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 13989 6 - 126596 TCATTC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738239 6 + 99891981 tcattc i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077459 6 - 128169293 TCATTA i calJac3.chr8 C 0 I 2 s aotNan1.NW_018514471v1 1864909 6 - 9267652 TCATTA i aotNan1.NW_018514471v1 C 0 I 2 s canFam3.chr18 51732341 6 - 55844845 ttatgc i canFam3.chr18 I 182 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66721808 708 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1358879 460 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e saiBol1.JH378145 699493 4 - 18371965 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=8594.000000 s hg38.chrUn_KI270749v1 35809 5 + 158759 tttat s panPan2.chr7 108491386 5 - 162613886 TTTAT i panPan2.chr7 C 0 I 1 s gorGor5.CYUI01000522v1 13995 5 - 126596 TTTAT i gorGor5.CYUI01000522v1 C 0 I 1 s ponAbe2.chrUn 66722516 5 - 72422247 tttat i ponAbe2.chrUn I 708 I 542 s nomLeu3.chr17 55738245 5 + 99891981 tttat i nomLeu3.chr17 C 0 I 1 s calJac3.chr8 108077467 5 - 128169293 CTTGT i calJac3.chr8 I 2 C 0 s aotNan1.NW_018514471v1 1864917 5 - 9267652 TTTGT i aotNan1.NW_018514471v1 I 2 C 0 s canFam3.chr18 51732347 5 - 55844845 ctttt i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1358879 460 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e saiBol1.JH378145 699493 4 - 18371965 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=34283.000000 s hg38.chrUn_KI270749v1 35814 41 + 158759 tttactt-----gttt--t------------ctctctctctCTCTCAC-----------TGTTTCTCTCCT s panPan2.chr7 108491392 46 - 162613886 TTTATTTTGGTGGTTT--T------------Atctctctctctctcac-----------tgtttctctcct i panPan2.chr7 I 1 C 0 s gorGor5.CYUI01000522v1 14001 48 - 126596 TTTATTTTACTGGTTTTAt------------ctctctctctctctcac-----------tgtttctctcct i gorGor5.CYUI01000522v1 I 1 C 0 s nomLeu3.chr17 55738251 46 + 99891981 tttattttagtggttt--t------------atctctCTCTCTCTCAC-----------TGTTTCTCTCCT i nomLeu3.chr17 I 1 C 0 s calJac3.chr8 108077472 46 - 128169293 -----TTTACTGGTAT--T-------tctctctctctctctctctctc-----------tctctctctctc i calJac3.chr8 C 0 I 93 s saiBol1.JH378145 699497 29 - 18371965 -------------------------------ctctctctctctctctc-----------tctctctctctc i saiBol1.JH378145 I 4 I 4 s aotNan1.NW_018514471v1 1864922 64 - 9267652 -----TTTACTGGTAT--tctctctctctttctctctctctctctctcCCCCCCGCCATTCTCTCTCTCTC i aotNan1.NW_018514471v1 C 0 I 8 s canFam3.chr18 51732352 42 - 55844845 ---tgtatattatttt--c------------cttattctatattatac-----------tgt-tctctctt i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66722521 542 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1358879 460 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=393508.000000 s hg38.chrUn_KI270749v1 35855 188 + 158759 TCTCA--CATTCACTTTGCAGTTGTCAAATAGCCCAGGTGATGTTACAGAT-TGACTCCTTATAAAAGGAGGCATTACACATTACACATGCATCTTAGTGGCCTTAAAAAAGTGTTTGGTTTATTTGT----------------AT-----GGACTATTCACCTTTAAAATATTTCA--ATATTCATTAAAATAGCTTCCAACCAATATTATTA- s panPan2.chr7 108491438 188 - 162613886 tctcA--CATTCATTTTGCAGTTGTCAAATAGCCCAGGTGATGTTACAGAT-TTACTCCTTATAAAAGGAGGCATTACACATTACACATACATCTTAGTGGCCTTACAAAAGTGTTTGGTTCATTTGT----------------AT-----TGTCTATTCACCTTTAAAATATTTCA--ATATTCATTAAAATAGCTTCCAACCAATATTATTA- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14049 188 - 126596 tctcA--CATTCACTTTGCAGTTGTCAAATAGCCCAGGTGATGTTACAGAT-TTACTCCTTATAAAAGGAGGCATTACACATTACACATGCATCTTAGTGGCCTTACAAAAGTGTTTGGTTTATTTGT----------------AT-----TGACTATTCAACTTTAAAATATTTCA--ATATTCATTAAAACAGCTTCCAACCAATATTATTA- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738297 188 + 99891981 TCTTA--CATTCACTTTGCAGTTGTCAAATAGCCCAGGTGATGTTACAGAT-TTACTCCTTATAAAAGGAGGCATTACACATTACACATGCATCTTAGTGGCCTTACAAAAGTGTTTGGTTCATTTGT----------------AT-----TGACTATTCACCTTTAAAATATTTCA--ATATTCATTAAAATAGCTTCCAACCAATATTATTA- i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077611 185 - 128169293 TCTCA--TATTCACTTTGTAGTTGTGGAGCAGCCCAAGTGATGTTGCAGAT-TTACTGCTTATA-------GCATTATGTATCACAAATGCATCTTAGTGGCGTTACACAAGTGTTTGGTTCATTTGT------------ATGCAT-----TAAATATTCACCTTTAAAATATTGCA--CTATTCATTAAAATGGCTTCTAACCCATACTATTA- i calJac3.chr8 I 93 I 12 s saiBol1.JH378145 699530 178 - 18371965 ----------------tGTAGTTGTGGAACAGCCCAAGTGATGTTGCAGAT-TTACCGCTTATAAAAGGAGGCATTACGCATCACACATGCATCTTAGTGGCGTTACACAAGTGTTTGGTTCATTTGT------------ATGCAT-----TCATTATTCACCTTTAAAATATTGCA--GCATTCATTAACATCGCTTCTAGCCCATGTTATTA- i saiBol1.JH378145 I 4 I 12 s cebCap1.NW_016107540v1 1359339 192 + 3566421 TCTCA--CATTCACTTTGTAGTTGTGGAACAGCCCAAGTGATGTTGCAGAT-TTACTACTTATAAAAGGAGGCATTATGCATCACACATGCATCTTAGTGGCGTTACACAAGTGTTTGGTTCATTTGT------------ATGCAT-----TAAATATTCACCTTTAAAATATTGCA--CCATTCATTAAAATGGCTTCTAGCCCATATTATTA- i cebCap1.NW_016107540v1 I 460 I 319 s aotNan1.NW_018514471v1 1864994 192 - 9267652 TCTCA--CATTCACTTTGTAGTTGTGGAACAGCCCAAGTGATGTTGCAGAT-TAACCGCATATAAAAGGAGGCATTACGCATCACACATGCATCTTAGTGGCATTACACAAGTGTTTGGTTCATTTGT------------ATGCAT-----TAAATATTCACCTTTAAAATATTGCA--CTATTCATTAAAATGGCTTCTAacccatattatta- i aotNan1.NW_018514471v1 I 8 I 327 s canFam3.chr18 51732394 187 - 55844845 tctcatttattcattttttatttct-aagtagcccaattaatgttagaaatgtttctctttaca--------------------------tatttttgctgcattatacagccgtttcttttctttttttttttacagccgtttattttcatgattatttaactgagatatattgtaatatattcattatcatgtctt-tgacccagatcattta i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66722521 542 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=14218.000000 s hg38.chrUn_KI270749v1 36043 15 + 158759 GACTT-----ATGtttctag s panPan2.chr7 108491626 15 - 162613886 GACTT-----ATGtctctcg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14237 15 - 126596 CACTT-----ATGtttctaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738485 16 + 99891981 GACTTA----ATGtttctag i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077808 20 - 128169293 GACTGATGTGATGTTTCTAG i calJac3.chr8 I 12 C 0 s saiBol1.JH378145 699720 20 - 18371965 GACCGATGTGATGCTTCTAG i saiBol1.JH378145 I 12 I 283 s canFam3.chr18 51732581 15 - 55844845 gactt-----atttttctag i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66722521 542 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1865186 327 - 9267652 I e cebCap1.NW_016107540v1 1359531 319 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=6958.000000 s hg38.chrUn_KI270749v1 36058 6 + 158759 ctttcg s panPan2.chr7 108491641 6 - 162613886 ctttct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14252 6 - 126596 ctttca i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738501 6 + 99891981 ttttct i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077828 6 - 128169293 CTTTCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 700023 6 - 18371965 CTTTGT i saiBol1.JH378145 I 283 C 0 s canFam3.chr18 51732596 6 - 55844845 ttttcT i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66722521 542 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1865186 327 - 9267652 I e cebCap1.NW_016107540v1 1359531 319 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=8852.000000 s hg38.chrUn_KI270749v1 36064 3 + 158759 ttt s panPan2.chr7 108491647 3 - 162613886 ttt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14258 3 - 126596 ttt i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738507 3 + 99891981 ttt i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108077834 3 - 128169293 TTC i calJac3.chr8 C 0 I 284 s saiBol1.JH378145 700029 3 - 18371965 ttt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1359850 3 + 3566421 ttt i cebCap1.NW_016107540v1 I 319 C 0 s aotNan1.NW_018514471v1 1865513 3 - 9267652 ttt i aotNan1.NW_018514471v1 I 327 C 0 s canFam3.chr18 51732602 3 - 55844845 TTT i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66722521 542 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=81109.000000 s hg38.chrUn_KI270749v1 36067 39 + 158759 ttgtattgatatctgccttcattgctgtttgtttaggaa s panPan2.chr7 108491650 39 - 162613886 ttgtattgatatctaccttgattgctgtttgtttaggaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14261 39 - 126596 ttgtattgatatctgccttcattgctgtttgtttaggaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738510 39 + 99891981 ttgtattgatatctaccttgattgctgtttgttcaggaa i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108078121 39 - 128169293 ttgtgttgatagataccttaattactgtttgttcaggaa i calJac3.chr8 I 284 C 0 s saiBol1.JH378145 700032 39 - 18371965 ttgtattgatagataccttaattgctgtttgttcaggaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1359853 39 + 3566421 ttgtattgataggtaccgtaattgctgtttgttcaggaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1865516 39 - 9267652 ttgtattgatagataccttaattgctgtttgttcaggaa i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51732605 19 - 55844845 --TTGTTG-------------TTGCTATTCCTTT----- i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66722521 542 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 67268004 451 + 192294377 I e panTro5.chr1 101808816 54727 - 228573443 I a score=1577.000000 s hg38.chrUn_KI270749v1 36106 1 + 158759 g s panPan2.chr7 108491689 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14300 1 - 126596 a i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738549 1 + 99891981 a i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 125025935 1 - 192294377 G i macFas5.chr3 n 451 C 0 s calJac3.chr8 108078160 1 - 128169293 a i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 700071 1 - 18371965 a i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1359892 1 + 3566421 a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1865555 1 - 9267652 a i aotNan1.NW_018514471v1 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66722521 542 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e canFam3.chr18 51732624 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 1721237 459 + 6934359 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e panTro5.chr1 101808816 54727 - 228573443 I a score=887987.000000 s hg38.chrUn_KI270749v1 36107 255 + 158759 tatattctgtgtcacgttatttccgtgaaaattgtttgaatttgtggtatggtctagaaaatgttaatttttgtaagtattctgtatgaacaataaaataacatgaattataatattcatgttccttatataatatttgccctttttaaaatccactagcttcttttaaaacttactcttttaa-------ttttttcttttatctattattgaaagatgtgtgtttgaaatgtctataat-atttgggggcttatccatttc s panPan2.chr7 108491690 256 - 162613886 tatattctgtgtcacgttatttccatgaaaattgtttgaatttgtggtatggtctagaaaatgttaatttttgtaagtattctgtatgaacatgaaaataacatgaattataatattcgtgttccatatataacatttgccctttttaaaatccactagcttcttttaaaacttactcttttaa-------ttttttcttttatctattactgaaagatgtgtgtttgaaatgtctgtaatgatttgggggcttatccatttc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14301 255 - 126596 tatattctgtgtcacgttatttccgtgaaaattgtttgaatttgtggtatggtctagaaaatgttaatttttgtaagtattctgtatgaacatgaaaataacatgaattataatattcatattccttatataatatttgccctttttaaaatccactagcttcctttaaaacttactcttttaa-------ttttttcttttatctattactgaaagacgtgtgtttgaaatgtctataat-atttgggggcttatccatttc i gorGor5.CYUI01000522v1 C 0 I 4 s nomLeu3.chr17 55738550 256 + 99891981 tatattctgtgtcatgttatttctgcgaaaattgtttgaatttgtggtatggtctagaaaatgttaatttttgtaagtattctgtatgaacatgaaaataacattaattataatattcgtgctccatatataacatttgccctttttaaaatccactagcttcttttaaaacttactctttaaa-------ttttttcatttatctattactgaaagatgtgtgtttgagatgtctataatgatttgggggcttatccatttc i nomLeu3.chr17 C 0 I 4 s macFas5.chr3 125025936 255 - 192294377 Tatattctgtgtcacgttatttctgtgaaaattgtttgaatttgtggtatggtccagaaaatgttgatttttgtaagtattctgtatgaacatgaaaataacatgaattataatattcgtgttccatatataacatttgcgctttttaaaatccactagcttcttttaaaatttattcttttaa--------tttttcttttatctattactgaaagatgtgtgtttgaaatatctgtaatgatttgggggcttatccatttc i macFas5.chr3 C 0 I 4 s colAng1.NW_012115910v1 5212678 263 - 6934359 tatattctgtgtcacgttatttctgtggaaattgtttgaatttgtggtatggtccagaaaatgttgatttttgtaagtatcctgtatgaacatgaaaataacatgaattataatattcgtgttccatatataacatttgccctttttaaaatccactagcttcttttaaaatttactcttttaattttttttttttttttttatctattactgaaagatgtgtgtttgaaacatctgtaatgatttgggggcttatccatttc i colAng1.NW_012115910v1 n 459 I 4 s calJac3.chr8 108078161 232 - 128169293 tacattctgtgtaacgttatttccatgaaaattgtttgaatttgtggtatagtccagaaaatattactttttgtaagtattctgtatgaacatgaaaataatatgaattatagtattcatgttctatatataacatttgccttttt--aaatccactagtttctttcaaa-----------------------------tttatctattactgaaagatgtgtgtctgaaatatctataatgatttgggtgcttatccatttc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 700072 254 - 18371965 tagattctatataatgttatttccatgaaaattgtttgaatttgtggtatagttcaggaaatattagtttttgtaagtactctgtatgaacacaaaaagaatatgaataataatattcatgttctatatataacatttgccttttt--aaatccaccagcttctttcaaaactcactcttttaa-------ttttttcttttatctattactgaaagatgtgtgtctgaaatacctataatgatttgggggcttatccatttc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1359893 254 + 3566421 tacattctgtataatgttatttccatgaaaattgtttgaatttgtggtataatccaggaaatattaa-ttttgtaagtattctgtatgaacatgaaaataatatgaattataatattcatgttctatatataacatttaccttttt-aaaatccactagcttctttgaaaactcattcctttaa-------ttttttcttttatctattactgaaagatgtgtgtctgaaatatctataatgatttgggggcttatccatttc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1865556 254 - 9267652 tacattctgtataacgttattttcatgaaaattgtttgaatttgtggtatagtccaggaaatattagtttttgtaagtattctgtatgaacatgaaaataatatgaattataatattcatgttctatatataacatttgccttttt--aaatccactagcttctttcaaaactcactcttttaa-------ttttttcttttatctattactgaaagatgtgtgtctgaaatatctataatgatttgggggcttatccattcc i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51732624 129 - 55844845 -----CCAATG------------CATGGTATTTGATTAATTTTGT-------------------------------------------------------------------------------------------------------TAATCAAAGGGCTCCTTTCAGTGCTCAATATTTTAA-------TTTTTTCT----CCTATGactgaa--atatatgtttgaaatgtctacagtgatttggg-atttagccatttc i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66722521 542 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e panTro5.chr1 101808816 54727 - 228573443 I a score=20922.000000 s hg38.chrUn_KI270749v1 36362 4 + 158759 tact s panPan2.chr7 108491946 4 - 162613886 tact i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14560 4 - 126596 tact i gorGor5.CYUI01000522v1 I 4 C 0 s ponAbe2.chrUn 66723063 4 - 72422247 tact i ponAbe2.chrUn I 542 I 912 s nomLeu3.chr17 55738810 4 + 99891981 tact i nomLeu3.chr17 I 4 C 0 s macFas5.chr3 125026195 4 - 192294377 tact i macFas5.chr3 I 4 C 0 s colAng1.NW_012115910v1 5212945 4 - 6934359 tact i colAng1.NW_012115910v1 I 4 C 0 s calJac3.chr8 108078393 4 - 128169293 tact i calJac3.chr8 C 0 I 5 s saiBol1.JH378145 700326 4 - 18371965 tact i saiBol1.JH378145 C 0 I 5 s cebCap1.NW_016107540v1 1360147 4 + 3566421 tact i cebCap1.NW_016107540v1 C 0 I 5 s aotNan1.NW_018514471v1 1865810 4 - 9267652 tact i aotNan1.NW_018514471v1 C 0 I 5 s canFam3.chr18 51732753 4 - 55844845 tctt i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e panTro5.chr1 101808816 54727 - 228573443 I a score=116308.000000 s hg38.chrUn_KI270749v1 36366 31 + 158759 -----ttctgatat-ttttgctttatataatttgact s panPan2.chr7 108491950 31 - 162613886 -----ttctgatat-ttttgctttatataatttgact i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14564 31 - 126596 -----ttctgatat-ttttgctttatataatttgact i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738814 29 + 99891981 -----ttctgatat-ttttgc--tatataatttgact i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 125026199 30 - 192294377 -----ttctg--atattttgctttatataatttgact i macFas5.chr3 C 0 C 0 s colAng1.NW_012115910v1 5212949 32 - 6934359 -----ttctgatatattttgctttatataatttgact i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108078402 31 - 128169293 -----ttctgatat-ttttgctttatataatttgact i calJac3.chr8 I 5 C 0 s saiBol1.JH378145 700335 31 - 18371965 -----ttctgatat-ttttgctttatataatttTACT i saiBol1.JH378145 I 5 C 0 s cebCap1.NW_016107540v1 1360156 31 + 3566421 -----ttctgatat-ttttgctttgtataatttaaCt i cebCap1.NW_016107540v1 I 5 I 72 s aotNan1.NW_018514471v1 1865819 31 - 9267652 -----ttctgatat-ttttgctttatataatttgact i aotNan1.NW_018514471v1 I 5 C 0 s canFam3.chr18 51732757 34 - 55844845 tgtagttctgatat-tttttatttatataggttgg-- i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e panTro5.chr1 101808816 54727 - 228573443 I a score=38725.000000 s hg38.chrUn_KI270749v1 36397 33 + 158759 ctctctCTAAATAtgtgtgtgtctctgtgtgt--g s panPan2.chr7 108491981 33 - 162613886 ctctcttTAAATAtgtgtgtgtgtgtgtgtgt--g i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14595 35 - 126596 ctctctCTAAATAtgtgtgtgtctgtgtgtgtgag i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738843 30 + 99891981 ctctc--tAAATAtgtgtgtgtgtgtgtgtgt--- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 125026229 32 - 192294377 ctctctCTAAAtgtgtgtgtgtgtgtatgtAT--- i macFas5.chr3 C 0 C 0 s colAng1.NW_012115910v1 5212981 32 - 6934359 ctctaaatatgtgTGTGTGTGTGTGTATGTAT--- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108078433 23 - 128169293 --------atatgtttgtgtgtgtgtgtgtg---- i calJac3.chr8 C 0 I 6 s saiBol1.JH378145 700366 23 - 18371965 --------ATATGTTTGtgtgtgtgtgtatg---- i saiBol1.JH378145 C 0 I 6 s aotNan1.NW_018514471v1 1865850 23 - 9267652 --------atatgtttatgtgTGTGTGTGGT---- i aotNan1.NW_018514471v1 C 0 I 16 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1360187 72 + 3566421 I e canFam3.chr18 51732791 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e panTro5.chr1 101808816 54727 - 228573443 I a score=1937.000000 s hg38.chrUn_KI270749v1 36430 15 + 158759 agagagtgtgtggtt s panPan2.chr7 108492014 12 - 162613886 agtgtgtgtgag--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14630 15 - 126596 agagagtgtgtggtt i gorGor5.CYUI01000522v1 C 0 C 0 s calJac3.chr8 108078462 11 - 128169293 ----tgtgtgtgtat i calJac3.chr8 I 6 I 1 s saiBol1.JH378145 700395 11 - 18371965 ----tgtatatatat i saiBol1.JH378145 I 6 I 5 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1865873 16 - 9267652 I e cebCap1.NW_016107540v1 1360187 72 + 3566421 I e canFam3.chr18 51732791 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213013 0 - 6934359 C e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026261 0 - 192294377 C e nomLeu3.chr17 55738873 0 + 99891981 C e panTro5.chr1 101808816 54727 - 228573443 I a score=67535.000000 s hg38.chrUn_KI270749v1 36445 54 + 158759 tgtgtgtatatatatatgtatgtATCAGGCTAATGCAC------ATTTAAGTCATCACA---T s panPan2.chr7 108492026 57 - 162613886 tgtgtgtATATATGCATATATGTATCAGGCTAATGCAC------ATTTAAGTCATCACATCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14645 57 - 126596 tgtgtgtatatatatatgtatgtATCAGGCTAATGCAC------ATTTAAGTCATCACATCTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738873 56 + 99891981 -gtgtgtATGTATGTATATATGtgtcaggctaatgcac------atttaagtcatcacatctt i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 125026261 38 - 192294377 -------------------ATATATCAGGCTAATGCAC------ATTTAAGTCATCACATCTT i macFas5.chr3 C 0 C 0 s colAng1.NW_012115910v1 5213013 35 - 6934359 -------------------ATATATCAGGCTAATGTAT------ATTTAAGTCATCACA---T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108078474 34 - 128169293 ---atatatgtatctgtat-tttatcaggctaatgcac------------------------- i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 700411 38 - 18371965 tatatatatatatatatatatatatCAAGCTAATGCAC------------------------- i saiBol1.JH378145 I 5 C 0 s aotNan1.NW_018514471v1 1865889 44 - 9267652 tgtatgtatgtatCTGTATTTTTATCAGGCTAATGCATTTAATT------------------- i aotNan1.NW_018514471v1 I 16 C 0 s canFam3.chr18 51732791 43 - 55844845 -----------atatacatatatgtaaggctaatacac------atataaatcatcacat--- i canFam3.chr18 C 0 I 2 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1360187 72 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e panTro5.chr1 101808816 54727 - 228573443 I a score=237728.000000 s hg38.chrUn_KI270749v1 36499 77 + 158759 CTTAAT-AACTTAAAACTTTTATCACACTGGTTAGACTAACTTATTTTAATAAATATTTCT-AACTTACATTCTGTTTT s panPan2.chr7 108492083 77 - 162613886 CTTAAT-AACTTAAAACTTTTATCAGACTGGTTAGCCTAACTTATTTTAATAAATGTTTCT-AACTCACATTCTATTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14702 77 - 126596 CTTAAT-AACTTAAAACTTTTATCACACAGGTTAGACTAACTTATTTTAATAAATGTTTCT-AACTTACATTCTATTAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55738929 77 + 99891981 cttaat-aacttaaaacttttatcacactggttagactaacttattttaataaatgtttct-aatttacattctatttt i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 125026299 77 - 192294377 CTTGAA-AACTTAAAATTTTTATCATACTGGTTAGACTCACTTATTTTAATAAATGTTTCT-AACTTACATTCAATTTT i macFas5.chr3 C 0 T 12546 s colAng1.NW_012115910v1 5213048 77 - 6934359 CTTAAA-AACTTAAAATTTTTAGAATACTGGTTAGACTCACTTATTTTAAGAAATGTTTCT-AACTTACATTCTATTTT i colAng1.NW_012115910v1 C 0 T 12617 s calJac3.chr8 108078508 77 - 128169293 -ttaattaacctaaaactttgatcacactgatgggactcacttattttaataaatgtttctaaacttacattctattt- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 700449 77 - 18371965 -TTAATTAACCTAAAACTTTGATCACACTGATTGGATTCACTTATTTT-ATAAATGTTTCTAAACATACATTCTATTTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1360259 77 + 3566421 CTTAATTAACCTAAAACTTTTAT--CACTGATTGGACTCACTTATTTTAATAAATGTTTCTAAACTTACATTCTATTTT i cebCap1.NW_016107540v1 I 72 C 0 s aotNan1.NW_018514471v1 1865933 71 - 9267652 -------AACCTAAAACTTTGATCACACTGATTGGACTCACTTATTTTAATAAATGTTTCTAAAC-TACATTCTATTTG i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51732836 71 - 55844845 cccaat-aaatcaaaacttttataataaagaata-attccctcatattaata-----cttt-tacttaaattctatttt i canFam3.chr18 I 2 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e panTro5.chr1 101808816 54727 - 228573443 I a score=293605.000000 s hg38.chrUn_KI270749v1 36576 142 + 158759 GTCTAC-------------ATAACAACTTTTTAAAAAATTATATTCatgtagtatgtttgtatgtatatcatatatACACAGTATCTGTATTGTTCAAACTTCAAAGTTCCTGTAAATTTATATATTAGTTGCCTCTCTTGTAACTATGATAGAG s panPan2.chr7 108492160 142 - 162613886 GTCTAC-------------ATAGAAACTTTTTTTAAAATtatattcatgtagtatatttgtatgtatatcatatatacacagtatctgtatTGTTTGAACTTCAAAGTTTCTGTAAATTTATATATTAGTTGCCTCTCTTGTAACTATGACAGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14779 141 - 126596 GTCTAC-------------ATAGCAACTTTTTAAAAAATTATATTCATGTAGTATGTTTGTAAGTATATCATATATACACAGTATGTGTATTGTTTGAACTTCAAAGTTTCTGTAAATTTATATATTAGTTGCCTC-CTTGTAACTATGATAGAG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739006 142 + 99891981 gtctac-------------atagcaactttttaaaaaattatattcatgtagtatgtttatatgtatatcatatatacacagtatctgtattgtttgaacttcaaagtttctgtaaatttatatattagttgccgctattgtaactatgatagag i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108078585 134 - 128169293 gtctat-------------atagcaactt----aaaaattatattcatataaaa----tatatgtatataacatatacacagtttgtatattgtctgaacttcaaattttctgtaaatttatgtattagttgtgtctcttgtaactatcatagag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 700526 134 - 18371965 GTCTAT-------------ATAGCAACTT----AAAAATTATATTCATGTAAAA----TGTATGTATATAACATATATACAGTTTGTATATTGTCTGAACTTCAAATTTTCTGTAAATttatgtattagttgtatctcttgtaactatcatagag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1360336 134 + 3566421 GTCTAT-------------ATAGCAACTT----AAAAATTATATTCATGTGAAA----TGTATGTATATAACATATACACAGTATGTATACTGTCTGAACTTCAAATTTTCTCTAAATttatgtattagttgtgtctcttgtaactatcatagag i cebCap1.NW_016107540v1 C 0 I 1333 s aotNan1.NW_018514471v1 1866004 134 - 9267652 GTCTAT-------------ATAGCAACTT----AAAAATTATATTCATGTAAAA----TGTATGTATATAACATATGCACAGTTTGTATATTGTCTGAACTTCAAATTTTCTGTAAATttatgtattagttgtttctcttgtaactatcatagag i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51732907 124 - 55844845 gcttatcattgctataacaatatcaactt-tcaaaatattgcatttgcgtagca----------------------------tgttcctattatttgaatttcaatctttctgtaatcttatatcttggtag--tcatttgtaaccatcatagaa i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T e panTro5.chr1 101808816 54727 - 228573443 I a score=132540.000000 s hg38.chrUn_KI270749v1 36718 94 + 158759 ACAGA--TGTTTTAA---------------------ATTTTGCCAATCTTTGTATTTTAACAAAAAC-ATTGTCTACTTAGGTTTAAG------TTAATCTTTGATCATTTATACTTAATTTTG s panPan2.chr7 108492302 93 - 162613886 AGGGA--TTTTTTAA---------------------ATTTTGCCTATCTTTCTATTTTAACAAAAAC-ATTGTCTACTTATGTTTAAG------TTAATCTTTGATCATTTATACTTAA-TTTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 14920 94 - 126596 ACGGA--TGTTTTAA---------------------ATTTTGCCAATCTTTGTATTTTAACAAAAAC-ATTGTCTACTTAGGTTTAAG------TTAATCTTTGATCATTTATACTTAATTTTG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739148 95 + 99891981 gtgaa--ttttttta---------------------atgttgccaatctttgtattttaacaaaaac-attgtctacttatgtttaagtagacatttatacttgatcatttataC-----TTTG i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108078719 103 - 128169293 atggaatttttttaaaaa--------------gtttattctgccaatctttgtattttaacaaaaac-tttgtctacttacatttaaG------TTCATCTTTGATCACTTATAGTTAATTTTG i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 700660 103 - 18371965 atggaatttttttaaaaa--------------gtttattctgccaatctttgtattttaacaaaaac-tttgtctacttacctttaAG------TTCATCTTTGATCATTTATACTTAATGTTG i saiBol1.JH378145 C 0 I 2 s aotNan1.NW_018514471v1 1866138 100 - 9267652 atggaatttttttaaaaa--------------gtttattctgccaatctttgtattttaacaaaaac----gtctacttacatttaag------ttcatctttgatcatttatacttaattttg i aotNan1.NW_018514471v1 C 0 I 322 s canFam3.chr18 51733031 100 - 55844845 atgga------tTAAAAACAAAACAAAGCAACACCTCTTCTGTCAATCTTGGTATCTTAAGGAAACTTATTGTCTATTTATATGTAAG------GTGATCTTTGATACTTTA------------ i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T e panTro5.chr1 101808816 54727 - 228573443 I a score=3793.000000 s hg38.chrUn_KI270749v1 36812 22 + 158759 TATTATTAATTTGT-TGTGTGTG s panPan2.chr7 108492395 15 - 162613886 T-TTTTTAATTTGT-------TG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15014 22 - 126596 TATTATTAACTTGT-TGTGTGTG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739243 15 + 99891981 T-TTTTTCATTTGT-------TG i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108078824 21 - 128169293 T-TTTTTAATTTGT-tatgtata i calJac3.chr8 I 2 I 156 s saiBol1.JH378145 700765 22 - 18371965 T-TTTTTAATTtatatatatatg i saiBol1.JH378145 I 2 I 5 s canFam3.chr18 51733131 2 - 55844845 ---------------------TG i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866238 322 - 9267652 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T e panTro5.chr1 101808816 54727 - 228573443 I a score=100385.000000 s hg38.chrUn_KI270749v1 36834 136 + 158759 tatata---------------tatatatatatat---------------------------------------------------------------------------------------------------------atatatatatatatatatataCTGTCTCATTTTCTCCTATCAGtttctgtc-ttcttgttttaaaattatgactttta---tttttattgttttcatagatacaacagagaaatgcataat s panPan2.chr7 108492410 103 - 162613886 TATATA---------------TATA----------------------------------------------------------------------------------------------------------------------------------------TGTCTCATTTTCTCCTATCAGTT--TGTC-TTCTTGTTTTTAAATTATTACTTTTA---TTTTTATTGTTTTCATAGATACAACAGAGAAATGCCTAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15036 133 - 126596 TGtata---------------tatatatatatat---------------------------------------------------------------------------------------------------------atatatatatatatatatG---GGTCTCATTTTCTCCTATCACTTTCTGTC-TTCTTGCTTTAAAATTATGACTTTTA---TTTTTATTGTTTTCATAGATACAACAGAGAAATGCATAAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739258 112 + 99891981 tatata---------------tatatatatatta-------------------------------------------------------------------------------------------------------------------------------tGTCTCATTTTCTCCTATTAGTT--TGTC-TTCTTGTTTTTAAATTATGACTTTTA---TTTTTATTGTTTTCATAGATACAACAGAGAAATGCATAAT i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108079001 133 - 128169293 tatatg-----caaattaaaatgtatacatataa-------------------------------------------------------------------------------------------------------------------atgtatatatGATGTCTCATTTTCTCCTATCAGCTTCTG----TCTTGTTTTTAAATTATGACTTTTG---TTTTTATTGTTTTCATAGATACAACAGAGAAATGCATAGT i calJac3.chr8 I 156 C 0 s saiBol1.JH378145 700792 253 - 18371965 tatatgcataacaaattaaaatatatacatataaaatttatacaaattataaaatttatacacattgaatacatatatgtatatggatatattagacatgcattaaatgtatacaaacaaaatatatacaaattaaaatatatacatataaatatatataATGCCTCATTTTCTCCTATCAGTTTTTG----TCTTGTTTTTCAATTATGACTTTTA---TTTTTATTGTTTTCATAGATACAACAGAGAAATGCATAGT i saiBol1.JH378145 I 5 C 0 s canFam3.chr18 51733133 131 - 55844845 ---------------------TCCATACTTAAAA------------------------------------------------------------------------------------------------------------TATGTTTCCTTTTTTATATTTTCCCCCTTTTTATTTTTATTTCCCCCCATTTTTGTTGTTATATTATTACTTTTATTGTTTCTACTATTTATATGGATAGAGTAGAAAAATGCACAAT i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866238 322 - 9267652 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T e panTro5.chr1 101808816 54727 - 228573443 I a score=25803.000000 s hg38.chrUn_KI270749v1 36970 26 + 158759 gtccagtcaatttattaaagttccaa s panPan2.chr7 108492513 26 - 162613886 GTCCAGTGAATTTGTTAAAGTTCCAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15169 26 - 126596 GTCCAGTCAATTTATTAAAGTTCCAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739370 26 + 99891981 GTCCAGTGAATTTGTTAAAGTTCCTA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108079134 26 - 128169293 GCCGACTGAATTTGTTAAAGTCCCAA i calJac3.chr8 C 0 I 8 s saiBol1.JH378145 701045 26 - 18371965 GCCGACTGAATTTGTTTAAGTTCCCA i saiBol1.JH378145 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866238 322 - 9267652 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e canFam3.chr18 51733264 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T e panTro5.chr1 101808816 54727 - 228573443 I a score=910.000000 s hg38.chrUn_KI270749v1 36996 1 + 158759 a s panPan2.chr7 108492539 1 - 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15195 1 - 126596 A i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739396 1 + 99891981 A i nomLeu3.chr17 C 0 C 0 s saiBol1.JH378145 701071 1 - 18371965 A i saiBol1.JH378145 C 0 I 8 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866238 322 - 9267652 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e canFam3.chr18 51733264 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e calJac3.chr8 108079160 8 - 128169293 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T e panTro5.chr1 101808816 54727 - 228573443 I a score=141614.000000 s hg38.chrUn_KI270749v1 36997 292 + 158759 gtcggtcgcgcgcagtggctcacacctgtaatctcaacactt--------caggaggccgaggcgtgtggatcacgaggtcaggagttggagactagcctgaccaacatggtgaaaccccgtctatactaaaaatacaaaaattagccaggcatggtggcacttggctgtaatccccgctactcaggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagatggcgccaccacactccagcctgggagaaagagtgagtgagactccttctc---aaaaa s panPan2.chr7 108492540 303 - 162613886 GTCggtcatgcgcagtggctcacgcctgtaatcccaacacttcgggaggccgggaggccgaggcgtgtggatcacgaggtcaagagttggagaccagcctgaccaccatagtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggcacgcggctgtaatcccatctactcaggaggctgaggcaggagaattgtttgaaccggggaggcagaggttgcagtgagccgagatcgcgccactgccctccagcctgggcgacagagtgagtgagaatccgtctcacaaaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15196 292 - 126596 GTCggtcgcgcgcagtggctcacgcctgtaatctcaacactt--------cgggaggccgaggcttgtggatcacgaggtcaggagttggagactagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggcatgatggcacgcggctgtaatccccgctactcaggaggctgaggcaggagaattgcttgaatctgggggacagaggttgcagtgagcggagatgacgccactgcactccagcctgggagaaagagtgagtgagactccttctc---aaaaa i gorGor5.CYUI01000522v1 C 0 I 3 s nomLeu3.chr17 55739397 290 + 99891981 GTCggtcacgcgcagtggctcacgcctgtaatctcagcactt--------ctggaggctgaggcatgtggatcacgaggtcaggagttggagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcacgcggctgtaatccctgctactcaagaggctgagggaggagaattgcttgaacctgggagacagaggttgcagtgagccgagatcatgccactgcactccagtctgggcgacagagtgagtgagactccgtctc---aaa-- i nomLeu3.chr17 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866238 322 - 9267652 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e canFam3.chr18 51733264 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e saiBol1.JH378145 701072 8 - 18371965 I e calJac3.chr8 108079160 8 - 128169293 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T e panTro5.chr1 101808816 54727 - 228573443 I a score=9221.000000 s hg38.chrUn_KI270749v1 37289 12 + 158759 aaaaaaaaaaaa s panTro5.chr1 101863543 12 - 228573443 AAAAAGAAAAAG i panTro5.chr1 I 54727 C 0 s panPan2.chr7 108492843 12 - 162613886 aaaaaaaaaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15491 12 - 126596 aaaaaaaaaaGG i gorGor5.CYUI01000522v1 I 3 C 0 s nomLeu3.chr17 55739687 12 + 99891981 aaaaaaaaaaaa i nomLeu3.chr17 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723067 912 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866238 322 - 9267652 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e canFam3.chr18 51733264 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e saiBol1.JH378145 701072 8 - 18371965 I e calJac3.chr8 108079160 8 - 128169293 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=2865.000000 s hg38.chrUn_KI270749v1 37301 2 + 158759 ag s panTro5.chr1 101863555 2 - 228573443 AG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108492855 2 - 162613886 aG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15503 2 - 126596 AG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66723979 2 - 72422247 ag i ponAbe2.chrUn I 912 I 12 s nomLeu3.chr17 55739699 2 + 99891981 aG i nomLeu3.chr17 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866238 322 - 9267652 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e canFam3.chr18 51733264 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e saiBol1.JH378145 701072 8 - 18371965 I e calJac3.chr8 108079160 8 - 128169293 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=10370.000000 s hg38.chrUn_KI270749v1 37303 11 + 158759 ttgcaaagtca s panTro5.chr1 101863557 11 - 228573443 TTGCAAAGTCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108492857 11 - 162613886 TTGCAAAGTCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15505 11 - 126596 TTGCAAAGTCA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739701 11 + 99891981 TTGCAAAGTCA i nomLeu3.chr17 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723981 12 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866238 322 - 9267652 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e canFam3.chr18 51733264 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e saiBol1.JH378145 701072 8 - 18371965 I e calJac3.chr8 108079160 8 - 128169293 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=1911.000000 s hg38.chrUn_KI270749v1 37314 1 + 158759 t s panTro5.chr1 101863568 1 - 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr7 108492868 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15516 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739712 1 + 99891981 T i nomLeu3.chr17 C 0 I 4 s calJac3.chr8 108079168 1 - 128169293 T i calJac3.chr8 I 8 C 0 s saiBol1.JH378145 701080 1 - 18371965 T i saiBol1.JH378145 I 8 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723981 12 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866238 322 - 9267652 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e canFam3.chr18 51733264 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=2548.000000 s hg38.chrUn_KI270749v1 37315 1 + 158759 a s panTro5.chr1 101863569 1 - 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr7 108492869 1 - 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15517 1 - 126596 A i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66723993 1 - 72422247 a i ponAbe2.chrUn I 12 C 0 s nomLeu3.chr17 55739717 1 + 99891981 A i nomLeu3.chr17 I 4 C 0 s calJac3.chr8 108079169 1 - 128169293 A i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701081 1 - 18371965 A i saiBol1.JH378145 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866238 322 - 9267652 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e canFam3.chr18 51733264 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=3600.000000 s hg38.chrUn_KI270749v1 37316 1 + 158759 c s panTro5.chr1 101863570 1 - 228573443 C i panTro5.chr1 C 0 C 0 s panPan2.chr7 108492870 1 - 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15518 1 - 126596 C i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66723994 1 - 72422247 c i ponAbe2.chrUn C 0 I 803 s nomLeu3.chr17 55739718 1 + 99891981 C i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108079170 1 - 128169293 C i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701082 1 - 18371965 C i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1866560 1 - 9267652 C i aotNan1.NW_018514471v1 I 322 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e canFam3.chr18 51733264 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=91646.000000 s hg38.chrUn_KI270749v1 37317 44 + 158759 c----tttctgctcttgtcagacaattaaggggtctttgaatacttca s panTro5.chr1 101863571 48 - 228573443 TCACTTTTCTGCTCTTGTCAGACAATTAAGGGTTCTTTGAATACTTCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108492871 48 - 162613886 TTACCTTTCTGCTCTTGTCAGACAATTAAGGGGTTTTTGAATACTTCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15519 44 - 126596 C----TTTCTGCTCTTGTCAGACAATTAAGGGGTCTTTGAATACTTCA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739719 44 + 99891981 ----CTTTCTGCTCTTGTCGGACAATTAAGGGGTCTTTGAATACTTCA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108079171 43 - 128169293 ----CTTTTTGCTCTGGCCAGGCAATTAAGGGATCTTT-AATACTTCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701083 44 - 18371965 ----CTTTTTGCTCTGGTCAGGCAATTAAGGGATCTTTGAATACTTCA i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1866561 44 - 9267652 ----CTTTTTGCTCTGGTCAGGCAATTAAGGGATCTTTGAATACTTCA i aotNan1.NW_018514471v1 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e canFam3.chr18 51733264 0 - 55844845 C e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=404311.000000 s hg38.chrUn_KI270749v1 37361 165 + 158759 gccctaataatttgcttcctaacatacatattgcagtgcttatcta--------------attttaaatatctttttgtttcaacaccTA---ATTTtttatttagatctatctgtatgtttacaatatatttttctctgtgttcattctttgatttcagaacttcaatctttctgaagcat s panTro5.chr1 101863619 164 - 228573443 GCCCTAATAATTTTCTTTTTATCATACATATTGCAGTGCTTATCTA--------------ATTTTAAATATATTTTTGTTTCAAAACACA---GTTTCTTATTT-GTTCTATCTGTATGTTTGCAATATATTTTACTCTCTGTTCATTCTTTGATTTCAGAACTTCAACCTTTCTGAAGCAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108492919 165 - 162613886 GCCCTAATAATTTGCTTCCCAACATACATATTGCAGTGCTTATCTA--------------ATTTTAAATATCTTTttgtttcaacaccta---attttttatttagatctatctgtatgtttacaatagattttgctctttgttcattctttgatttcagaacttcaacctttctgaagcat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15563 165 - 126596 GCCCTAATAATTTGCTTCCTAACATACATATTGCAGTGCTTATCTA--------------ATTTTAAATATCCTTTTGTTTCAACACCTA---AGTTtttgtttagatctatctgtatgtttacaatatattttcctctgtgttcattctttgatttcagaacttcaatctttctgaagcat i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739763 165 + 99891981 GCCTTAATAATTTGCTTCCCAACATACATATTGCGGTGCTTATCTA--------------ATTTTAAATATCTTTttgtttcagcactta---attttttatttagatctatccgtatgtttacaatatattttgctctttgttcattctttgatttcagaacttcaacctttctgaagcat i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108079214 165 - 128169293 GCTGTAATAATTTCCTTCTCAACATACATATTGCAGTGCTTATCTA--------------ATTTTAAATATCTTTTAGTTTCAACATCTA---ATTTtttatttagatctatccgtatatttacaatcggttttgttctttgttcgttctttcatttcagaacttcaacctttctgaagcat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701127 164 - 18371965 GCCCTAGTAATTTATTTCTCAACGTACATATTGCAGTGCTTATCTA--------------ATTTTAAATAT-TTTTGGTTACAACATCTG---ATTTtttatttagatctatctgtatatttacaatctgttctgctctttgttcattctttcatttcagaacttcaacctttctgaaatat i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1866605 165 - 9267652 GCCAGAATAATTTACTTCTCAACATACATATTGCAGTGCTTATCTA--------------ATTTTAAATATCTTTTTGTTTCAACATCTA---ATTTTTTATTTAAATCTATCTGTATATTTACAATCTGTTTTGCTCTTTATTCATTCTTTCATTTCAGAACTTCAACCTTTCTGAAGCAT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51733264 181 - 55844845 GCCTAATTAATCAAAGTTCTGATGTATATAATATAATGTGTACCCATTTTTTGTGTACCCATTTTAAATATCTTTTAATTTTAACACCTAAATaattttgatttcgatctattcatata-ttacaaaatattttgctctttattcattctttcaattcaaaaattccacttctttgaagtat i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 990057 5968 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=-4462.000000 s hg38.chrUn_KI270749v1 37526 1 + 158759 -g s panTro5.chr1 101863783 1 - 228573443 -A i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493084 1 - 162613886 -c i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15728 1 - 126596 -g i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739928 1 + 99891981 -c i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108079379 1 - 128169293 -c i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701291 1 - 18371965 -c i saiBol1.JH378145 C 0 C 0 s tarSyr2.KE946558v1 996025 1 - 1121937 -C i tarSyr2.KE946558v1 I 5968 I 255 s canFam3.chr18 51733445 1 - 55844845 a- i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866770 0 - 9267652 C e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=18271.000000 s hg38.chrUn_KI270749v1 37527 11 + 158759 --ttttcagagtt s panTro5.chr1 101863784 11 - 228573443 --TTTTCAGAGTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493085 11 - 162613886 --ttttcagagtt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15729 11 - 126596 --ttttcagagtt i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739929 11 + 99891981 --ttttcagaatt i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108079380 9 - 128169293 --ttttcag--tt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701292 9 - 18371965 --ttttcag--tt i saiBol1.JH378145 C 0 C 0 s canFam3.chr18 51733446 13 - 55844845 tctgttcagagtt i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 996026 255 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e aotNan1.NW_018514471v1 1866770 0 - 9267652 C e cebCap1.NW_016107540v1 1360470 1333 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=11486.000000 s hg38.chrUn_KI270749v1 37538 7 + 158759 tcttttt s panTro5.chr1 101863795 7 - 228573443 TCTCTGT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493096 7 - 162613886 ccttttt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15740 7 - 126596 tctttct i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739940 7 + 99891981 ccttttt i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108079389 6 - 128169293 tctgtc- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701301 7 - 18371965 tcttttt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1361803 7 + 3566421 tCTTTTT i cebCap1.NW_016107540v1 I 1333 C 0 s aotNan1.NW_018514471v1 1866770 6 - 9267652 -CTTTTC i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51733459 7 - 55844845 tctttgg i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 996026 255 - 1121937 I e otoGar3.GL873564 12691182 1144 + 14340318 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=291926.000000 s hg38.chrUn_KI270749v1 37545 93 + 158759 agtttctttagtggaattctgctggtggtgttttgttttttgtctctaaata----tgttatttag---ccataggttgatgaata-tttttcttggttga s panTro5.chr1 101863802 93 - 228573443 AGTTTCTTTAGTGGAATTCTGCTGGTGGCGTTTTGTTTTTTATCCCCAAATA----TGTTATTTAG---CCATAGGTTGATGAACA-TTTTTCTTCATTTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493103 93 - 162613886 agtttctttagtggaattctgctggtggcattttggtttttgtctctaaata----ttttatttag---ccataggttgatgaata-tttgtcttagttga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15747 93 - 126596 agtttccttagtggatttctgctggtggcgttttgttttttgtctctaaata----tgttatttag---ccataggttgaagaata-tttttcttggttga i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55739947 93 + 99891981 agtttctttagtggaattctgctggtggcattttggtttttgtctgtaaata----ttttatttag---ccataggttgatgaata-tttttcatggttga i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108079395 84 - 128169293 ----------gtggagttctgctggtggcattttgtttcttgtctctaagta----ttttatttag---ccataggttgattaatattttttcttagttga i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701308 94 - 18371965 agtttctttagtgaagttctgctggtggcattttgtttcttgtctctaagta----ttttatttag---tcataggttgattaatattttttcttagttga i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1361810 94 + 3566421 AGTTTCTTTAGTGGAGTTCTGCTGGTGGCATTTTGTTTCTTGTCTCTAAGTA----GTTTATTTAG---CCATAGGTTGATTAATATTTTTTCTTGGTTGA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1866776 94 - 9267652 AGCTTCTTTAGTGGAGTTCCGCTAGTGGCATTTTGTTTCTTGTCTCTAAGTA----TTTTATTTAG---CCATAGATTGATTAATATTTTTTCTTAGTTGA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12692326 90 + 14340318 AGTTTCTGAagtggtgttctgctggtcttattttgttt------tctaaaaaatgttcttatttgg---ccataaaat-atgaata-tttttcttggttga i otoGar3.GL873564 I 1144 C 0 s canFam3.chr18 51733466 89 - 55844845 -agttcttaactgtgattctgctgatggcattctgttag-----tctaaat-----ttttagggggggatcctggtccagtggata-ttttgcttggttgg i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58142221 1931 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 996026 255 - 1121937 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=106040.000000 s hg38.chrUn_KI270749v1 37638 35 + 158759 gaatttcagaatggc-att--attattc------ttA----ACAAATA s panTro5.chr1 101863895 35 - 228573443 GAAATTCAGAATGGC-ATT--ATTATTC------TTA----ACAAATA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493196 35 - 162613886 gaatctcagaatggc-att--attattc------tta----acaaata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15840 35 - 126596 gaatttcagaatggc-att--attattc------ttA----ACAAATA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55740040 35 + 99891981 gaatctcagaatggc-att--attattctttTTTTTA----A------ i nomLeu3.chr17 C 0 I 1806 s papAnu3.chr3 58144152 40 + 180432695 gattttcaaaagggcaaat--gttatgt------atggaacacgaata i papAnu3.chr3 I 1931 C 0 s calJac3.chr8 108079479 35 - 128169293 gaatttcaaaatggc-att--attattc------tta----gcaaata i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701402 35 - 18371965 gaatttcaaaatgac-gtt--attATTC------ATA----GCAAATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1361904 35 + 3566421 GAATTTCAAAATGGC-ATT--ATTATTC------TTA----GCAAATA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1866870 35 - 9267652 GAATTTCAAAATGGC-ATT--ATTATTC------TTA----GCAAATA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12692416 37 + 14340318 gaattctaagatggc-atttatttactc------cca----acaAATT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51733555 35 - 55844845 --ggtctataatgac-atttggtttctt------tca----gcccatg i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 996026 255 - 1121937 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=270590.000000 s hg38.chrUn_KI270749v1 37673 87 + 158759 ATATTGTTTATTTTACCTTTCATGCTTT------------CAGATTTCAATATGATTAAaggtaatttgat--tttt---c------tagtgctaattgaaatatttttc s panTro5.chr1 101863930 88 - 228573443 ATATTGTTTATCTTACCTTTCATTTTTT-----------TCAGATTTCAAAATGATTAAAAGTAATTtcat--tttt---c------tagtgctaattgaaatatttttc i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493231 87 - 162613886 atattgtttattttacctttcactcttt------------cagatttcaatatgattaaaggtaatttgat--tttt---c------tagtgctaattgaaatatttttc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15875 87 - 126596 ATATTGTTTATTTTACCTTTCATGCTTT------------CAGATTTCAATATGATTAAaggtaatttgat--tttt---c------tagtgctcattgaaatatttttc i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55741881 87 + 99891981 atattgtttattTTACCTTTCACTCTTT------------CAGATTtcagtatgatttaaggtattttgat--tttt---c------tagtgctaattgaaatatttttc i nomLeu3.chr17 I 1806 C 0 s papAnu3.chr3 58144192 87 + 180432695 ttataattcatgtta-ttttcatgttca------------ta-----cagaatacttacaaaaatcaacat--tttc---tggaccatactacaaattcaaacaattttc i papAnu3.chr3 C 0 I 6235 s calJac3.chr8 108079514 83 - 128169293 atattgtttattttaccgtccattcttt------------cagatttctatatgattaaagg---tttgat--tttc----------tagtgctcattaaaatatttgtc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701437 84 - 18371965 A---TGTTTATTTTACCATCCGTTCTTT------------CAGATTTCAATATGATTAAAAGTAATTGGAT--TTTC---T------TGGTGCTCATTAAAATATCTGCC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1361939 87 + 3566421 ATATTGTGTATATAACCATCCATTCTTT------------CAGATTTTAATACGATTAAAAGTAATTTGAT--TTTC---C------TGGTGCTCATTAAAATATCTATC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1866905 86 - 9267652 ATATTGTTTATTTTACCGTCCATTCTTT------------CAGA-TTCAATATGACTTAAGGTAATTTGAT--TTTC---C------TAGTGCTCATTAAAATATCTGTC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12692453 89 + 14340318 ACATTGTGT-TTTTACCCTTCATTCTTT------------CAGATTTCAAGACAATTAAaggcaatttgat--tttttttc------tagccccatgcgaaatattttct i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51733590 101 - 55844845 atattgtatattttacttttcattggtttaattaggaagtcaggttgctgtatgattaaaggtaatttgattatttc---c------taatcctgatgaaagtatttttt i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 996026 255 - 1121937 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=23844.000000 s hg38.chrUn_KI270749v1 37760 8 + 158759 -----ccttcctg s panTro5.chr1 101864018 8 - 228573443 -----ccttcctc i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493318 8 - 162613886 -----ccttcctg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15962 8 - 126596 -----ccttcctg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55741968 8 + 99891981 -----cctttctg i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108079597 8 - 128169293 -----ccttgctg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701521 8 - 18371965 -----CCTTGCTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1362026 8 + 3566421 -----CCTTGCTG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1866991 8 - 9267652 -----CCTTGCTG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12692542 8 + 14340318 -----gctttatg i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51733691 13 - 55844845 tcttttcttcctt i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 996026 255 - 1121937 I e manLeu1.NW_012105809v1 1122550 449 - 1799296 I e macNem1.NW_012011522v1 2750058 455 + 3123512 I e rheMac8.chr3 133438374 451 - 185818997 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I e cerAty1.NW_012000909v1 2470348 460 + 10077455 I e macFas5.chr3 125026376 12546 - 192294377 T a score=6189.000000 s hg38.chrUn_KI270749v1 37768 1 + 158759 a s panTro5.chr1 101864026 1 - 228573443 g i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493326 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15970 1 - 126596 a i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55741976 1 + 99891981 a i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438825 1 - 185818997 A i rheMac8.chr3 I 451 C 0 s macFas5.chr3 67268455 1 + 192294377 A i macFas5.chr3 I 451 C 0 s macNem1.NW_012011522v1 2750513 1 + 3123512 A i macNem1.NW_012011522v1 I 455 C 0 s cerAty1.NW_012000909v1 2470808 1 + 10077455 A i cerAty1.NW_012000909v1 I 460 C 0 s manLeu1.NW_012105809v1 1122999 1 - 1799296 A i manLeu1.NW_012105809v1 I 449 C 0 s calJac3.chr8 108079605 1 - 128169293 a i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701529 1 - 18371965 A i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1362034 1 + 3566421 A i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1866999 1 - 9267652 A i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12692550 1 + 14340318 g i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51733704 1 - 55844845 g i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 996026 255 - 1121937 I e dasNov3.JH578441 1129630 1925 + 1446996 I e colAng1.NW_012115910v1 5213125 12617 - 6934359 T e chlSab2.chr21 5678321 474 + 127223203 I a score=64741.000000 s hg38.chrUn_KI270749v1 37769 9 + 158759 ttgtttact s panTro5.chr1 101864027 9 - 228573443 ttgtttact i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493327 9 - 162613886 ttgtttact i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15971 9 - 126596 ctgtttact i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55741977 9 + 99891981 ttgtttact i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438826 9 - 185818997 TTGCTtacg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67268456 9 + 192294377 TTGCTtacg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2750514 9 + 3123512 TTGCTtacg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2470809 9 + 10077455 Ttgtttaca i cerAty1.NW_012000909v1 C 0 C 0 s manLeu1.NW_012105809v1 1123000 9 - 1799296 TTGTTTATG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1721696 9 + 6934359 ttgtttacg i colAng1.NW_012115910v1 I 459 C 0 s calJac3.chr8 108079606 9 - 128169293 ttgtttgcc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701530 9 - 18371965 TTGTTATCC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1362035 9 + 3566421 TTGTTTACC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1867000 9 - 9267652 TTGTTTACC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12692551 9 + 14340318 ttatttgta i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51733705 9 - 55844845 tcattttca i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 996026 255 - 1121937 I e dasNov3.JH578441 1129630 1925 + 1446996 I e chlSab2.chr21 5678321 474 + 127223203 I a score=46840.000000 s hg38.chrUn_KI270749v1 37778 4 + 158759 attt s panTro5.chr1 101864036 4 - 228573443 attt i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493336 4 - 162613886 attt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15980 4 - 126596 attt i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55741986 4 + 99891981 attt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438835 4 - 185818997 attt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67268465 4 + 192294377 attt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2750523 4 + 3123512 attt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2470818 4 + 10077455 attt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5678795 4 + 127223203 attt i chlSab2.chr21 I 474 C 0 s manLeu1.NW_012105809v1 1123009 4 - 1799296 Attt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1721705 4 + 6934359 attt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108079615 4 - 128169293 actt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701539 4 - 18371965 ACTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1362044 4 + 3566421 ACTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1867009 4 - 9267652 ACTT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12692560 4 + 14340318 gttt i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51733714 4 - 55844845 attt i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 996026 255 - 1121937 I e dasNov3.JH578441 1129630 1925 + 1446996 I a score=46400.000000 s hg38.chrUn_KI270749v1 37782 4 + 158759 ctct s panTro5.chr1 101864040 4 - 228573443 ctct i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493340 4 - 162613886 ctct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15984 4 - 126596 atct i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55741990 4 + 99891981 ctct i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438839 4 - 185818997 ctct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67268469 4 + 192294377 ctct i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2750527 4 + 3123512 ctct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2470822 4 + 10077455 ctct i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5678799 4 + 127223203 ctct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1123013 4 - 1799296 ctct i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1721709 4 + 6934359 ctct i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108079619 4 - 128169293 atct i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701543 4 - 18371965 ATct i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1362048 4 + 3566421 ATCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1867013 4 - 9267652 ATCT i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 996281 4 - 1121937 ctct i tarSyr2.KE946558v1 I 255 I 1111 s otoGar3.GL873564 12692564 4 + 14340318 ctct i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51733718 4 - 55844845 cact i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e dasNov3.JH578441 1129630 1925 + 1446996 I a score=787420.000000 s hg38.chrUn_KI270749v1 37786 82 + 158759 aggag------atatgtagaggtaggtttatctccattgtagcttgcttagcatgcatagaatttttgaatatgc-ggattagtgtc--tt s panTro5.chr1 101864044 82 - 228573443 aggag------atacataggtgtaggtttatctccattgtagcttgcttagcatgcatggaatttttgaacatgc-agattagtgtc--tt i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493344 82 - 162613886 aggat------atacataggtgtaggtttatccccattgtagcttgcttagcaagcattgaattcttgaatatgc-agattagtgtc--tt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 15988 82 - 126596 aggag------atatgtagatgtagttttatctccattgtagcttgcatagcatgcatagaagttttgaatatgc-agtttagtgtc--tt i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55741994 82 + 99891981 aggag------atacataggtgtaggtttatctccactgtagcttgcttagcaagcattgaattcttgaatatgc-agattagtgtc--tt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438843 81 - 185818997 aggag------atacttaggtgtaggttaatctcca-tgtaacttgcttagcatgcgttgagtttttgaatatgt-ggattagtgtc--tt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67268473 81 + 192294377 aggag------atacttaggtgtaggttaatctcca-tgtaacttgcttagcatgcgttgagtttttgaatatgt-ggattagtgtc--tt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2750531 81 + 3123512 aggag------atacttaggtgtaggttaatctcca-tgtaacttgcttagcatgcgttgagtttttgaatatgt-ggattagtgtc--tt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2470826 83 + 10077455 aggag------atacttaggtgtaggttaatctcca-tgtaacttgcttagcatgcgttgaatttttgaatatgt-ggatgagtgtctttt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5678803 81 + 127223203 aggag------atacttaggtgtaagttaatctcca-tgtaacttgcttagcatgcgttgaatttttgaatatgt-ggattagtgtc--tt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1123017 81 - 1799296 aggag------atacttaggtgtaggttaatctcca-tgtaacttacttagcgtgtgttgaatttttgaatatgt-ggattagtgtc--tt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1721713 81 + 6934359 aggag------atacttaggtgtaggttaatttcca-tgtaacttgcttagcatgtgttgaatttttgaatatgt-ggattagtgtc--tt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108079623 81 - 128169293 aggag------atacttaggtaaaggtttatctcca-tgtagcttgcttagcatgcattgaattattgaatatgt-ggattagtggc--tt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701547 81 - 18371965 aggag------atacttaggtgaaggttcatctcca-tgtagcttgcttagcatgcattgaatttttg-atacgtgggattagtggc--tt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1362052 81 + 3566421 AGGAG------ATACTTACTTGAAggttcatctcca-tgtagcttgcttagcatgcattgaattattgaatatgt-ggattagtggc--gt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1867017 81 - 9267652 AGGCG------ATACTtaggtgaaggtttatctcca-tgtagcttgcttagcatgcattgaattattgaatatgt-ggattagtggc--tt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12692568 86 + 14340318 atgagatattaatatttaagtacagatttatcttcc-tatagcttgctacg-actaactgcatttttgaatatgc-agacctgtttc--tt i otoGar3.GL873564 C 0 I 109 s canFam3.chr18 51733722 81 - 55844845 atgag------atactgagatgtagccttgttttcc-tacatcttggcttgaattgattgagttttttaatatgc-agattagtgtc--cc i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e dasNov3.JH578441 1129630 1925 + 1446996 I a score=2578531.000000 s hg38.chrUn_KI270749v1 37868 251 + 158759 acaagagtctagagaact-------------------ttcagccaaaataccatcacatattgtcccttccca--gttcc----cttcttctaagagaaccctcactaaacaca---tgctacactttctcactgtatcttccatgtctcttcatgattctgtccacattgtgcattttttaaaattttctgtaat-gcattctgaaata----------------------tttatgaactctcaccatggccatgtctaatctgatgagttcatttttgagtttttaatttaaaata-cta s panTro5.chr1 101864126 252 - 228573443 acaaaagtctagggaact-------------------ttcagccaaaatgccatcacatattgtcccttccca--attcc----cttcttctatgagaacactcactaaacaca---tgctacactttctcactgtatcttccatgtctcttcatcattctgtccacattttacattttttaaaattttcagtaat-gcattctgaaata----------------------tttatgaactctcaccttggccatgtctaatctgatgagttcatttttgagtttttaatttaaaataacta i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493426 251 - 162613886 acaaaagtgtagagaact-------------------ttcagccaaaataccatcacatattgtcccttccca--gttcc----tttcttctatgagaacactcactaaacaca---tgctacactttctcactgcatcttccatgtctcttaatgattctgtccacattttgcattttttcaaattatctgtaat-gcattctgaaata----------------------tttattaactctcaccatggctatgtctaatctgatgagttcatttttgagtttttaatttaaaata-cta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 16070 251 - 126596 acaaatgtctagagaact-------------------ttcagccaaaataccatcacatattgtcccttccca--attcc----cttcctctatgagaacactcactaaacaca---tgctacactttctcactgtatcttccatgtctcttcatgactctgtccacattgtgcattttttaaaattttctgtaat-gcattctgaaata----------------------tttatgaactctcaccatggccatgtctaatctgatgagtacatttttgagtttttaatttaaaata-cta i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55742076 251 + 99891981 acaaaaatctagagaact-------------------ttcagccaaaataccatcacatattgtcccttccca--gttcc----cttcttctatgagaacactcactaaacaca---tgctacactttctcactgcatcttccatgtctcttaatgattctgtccacattttgcatttttttaaattatctgtaat-gcattctgaaata----------------------tttattaactctcaccatggccatgtctaatctgatgagttcatttttgagtttttaatttaaaata-cta i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133438924 248 - 185818997 acaaaagtctagagaact-------------------ttcagtcaaaataccatcacatattatctcttccta--gttcc-------cttctatgagaacactcactaaataca---tgctacattttctcactgcaacttccatgtcttttaatgattctgtccacattttgcatttttccaagttatctgtaat-gcattctgaaata----------------------cttattaactctcaccatggccatttctaatctgatgagttcatttttgagtttttaatttaaaata-ctg i rheMac8.chr3 C 0 I 6 s macFas5.chr3 67268554 248 + 192294377 acaaaagtctagagaact-------------------ttcagtcaaaataccatcacatattatctcttccta--gttcc-------cttctatgagaacactcactaaataca---tgctacattttctcactgcaacttccatgtcttttaatgattctgtccacattttgcatttttccaagttatctgtaat-gcattctgaaata----------------------tttattaactctcaccatggccatttctaatctgatgagttcatttttgagtttttaatttaaaata-ctg i macFas5.chr3 C 0 I 6 s macNem1.NW_012011522v1 2750612 248 + 3123512 acaaaagtctagagaact-------------------ttcagtcaaaataccatcacatattatctcttccta--gttcc-------cttctatgagaacactcactaaataca---tgctacattttctcactgcaacttccatgtcttttaatgattctgtccacattttgcatttttccaagttatctgtaat-gcattctgaaata----------------------tttattaactctcaccatggccatttctaatctgatgagttcatttttgagtttttaatttaaaata-ctg i macNem1.NW_012011522v1 C 0 I 6 s cerAty1.NW_012000909v1 2470909 248 + 10077455 acaaaagtctagagaact-------------------ttcagtcaaaataccatcacatattatcccttccta--gttcc-------cttctgtgagaacactcactaaataca---tgctacattttctcactgcaacttccatgtcttttaatgattctgtccacattttgcattttttcaaattatctataat-gcattctgaaata----------------------tttattaactctcaccatggccatttctaatctgatgagttcatttttgagtttttaatttaaaata-ctg i cerAty1.NW_012000909v1 C 0 I 6 s chlSab2.chr21 5678884 247 + 127223203 acaaaagtctagagaact-------------------ttcagtcaaaataccatcacatattatcccttccta--gttcc-------cttctgtgagaacactcactaaataca---tgctaca-tttctcactgcaacttccatgtcttttaatgattctgtccacatttttcatttttccaaattatctgtaat-gcattctgaaata----------------------tttattaactctcatcatggccatgtctaatctgatgagttcatttttgagtttttaatttaaaata-ctg i chlSab2.chr21 C 0 I 6 s manLeu1.NW_012105809v1 1123098 248 - 1799296 acaaaagtctagagaact-------------------ttcagtcaaaatatcatcacatattatcccttctta--gttcc-------cttctgtgagaacactcactaaataca---tgctacattttctcactgcaacttccatgtcttttaatgattctgtccacattttgcatttttccaaattatctgtaat-gcattctgaaata----------------------tttattaactctcaccatggccatgtctaatctgatgagttcatttttgagtttttaatttaaaata-ctg i manLeu1.NW_012105809v1 C 0 I 6 s colAng1.NW_012115910v1 1721794 248 + 6934359 acaaaagtctagagaact-------------------ttcagccaaaataccatcacacattattccttccta--gttcc-------cttctatgaaaacactcactaaataca---tgctacactttctcactgcaacttccatgtcttttaatgattctgtccacattttgcattttttcaaattatctgtaat-gcattctgaaata----------------------tctgttaactctcaccatggccatgtctaatacgatgagttcatttttgagtttttaatttaaaata-ctg i colAng1.NW_012115910v1 C 0 I 6 s calJac3.chr8 108079704 242 - 128169293 acaaaagtctggagaact-------------------ttcagtcaaaatgccatcacatattgtctcttccca--gttcc----cttctttgataagaacactaattaaacaca---tgctacactttctcactgtattttccatgtctcttaatgattctgtcca-------catttttcCAAATTATCTGT-AT-GCATTCCGAAATA----------------------TTTATTCATTCTCACCACTGCCGAGTGTAATCTGCCGAGTTCATTATTGAG-TTTTAACTTAAAATA-CTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701628 244 - 18371965 aaaaaagtctggagaact-------------------ttcagccaaaatgccatcacagactgtctcttccca--gtcct----cttcctctatgagaacactcactaaacaca---tgctacactttctctctgtattttctatgtcacttattgattctatcca-------cattttttcaaattatctgtaat-gcattctgaaata----------------------tttattcactctcaccatggccgtgtctaatctgctgagttcatcattgagtttttaatttaaaaga-cta i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1362133 244 + 3566421 acaaaagtctggagaact-------------------ttcagccaaaatgccatcccatattgtctcttccca--gttcc----cttcgtctatgagaacactcactaaacaca---tgctatactttctcactgtattttccatgtcgcttaatgattctatcca-------cattttttcaaattatctgtgat-gcattctgaagta----------------------cttattcactctcaccatggccatgtctaatctgccgagttcattattgagttttgaatttaaaata-cta i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1867098 244 - 9267652 acaaaagtctggagaact-------------------ttccaccaaaatgccatcacatattgtctcttccca--gttcc----ctccttctatgagaacactcattaaacaca---tgctatactttctcactgtattttccatgtctcttaataattctatcca-------cattttttcaaattatctgtaat-gcattctgaaata----------------------tttattcactttcaccatggccatgtctaatctgccgagttcattattgagtttttaatttaaaata-cta i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12692763 251 + 14340318 aaaaaagtctagaaaa-t-------------------ttcacacaaaataccttcagttaatgtcctttcccactatttc----cccctcctatcaggatatgcattaaatgca---aataacactttc-cactctgtcttccaagtctttt-atgagtctgtccacatgctacatcttttcaaattatctgtaat-tcattctgaaatat---------------------tttattagctctcatcttaactgtgtctaatctgttgtgttcatcattgactctttaatctaaaata-ata i otoGar3.GL873564 I 109 C 0 s canFam3.chr18 51733803 296 - 55844845 tcaaaagcctggataacttttttttttcctagagaactttattaaaaaaatctttaagtattgtcctttcccc--attttttttcctcttgtattagaatatccattacatatagatgggaaccttttctcacattatcctctatat--tctgatgattccatccaaataccgtgtcttctcaaattacctataatcgcattctgaaatattttctttggcttacgtcgcactttgttaacttttg-cattgctttgtctgatgtgttaggtccatcatttattttttaactt-aaata-tta i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66723995 803 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e dasNov3.JH578441 1129630 1925 + 1446996 I a score=15561.000000 s hg38.chrUn_KI270749v1 38119 1 + 158759 t s panTro5.chr1 101864378 1 - 228573443 t i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493677 1 - 162613886 t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 16321 1 - 126596 t i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66724798 1 - 72422247 t i ponAbe2.chrUn I 803 I 299 s nomLeu3.chr17 55742327 1 + 99891981 t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439178 1 - 185818997 t i rheMac8.chr3 I 6 C 0 s macFas5.chr3 67268808 1 + 192294377 t i macFas5.chr3 I 6 C 0 s macNem1.NW_012011522v1 2750866 1 + 3123512 t i macNem1.NW_012011522v1 I 6 C 0 s cerAty1.NW_012000909v1 2471163 1 + 10077455 t i cerAty1.NW_012000909v1 I 6 C 0 s chlSab2.chr21 5679137 1 + 127223203 t i chlSab2.chr21 I 6 C 0 s manLeu1.NW_012105809v1 1123352 1 - 1799296 t i manLeu1.NW_012105809v1 I 6 C 0 s colAng1.NW_012115910v1 1722048 1 + 6934359 t i colAng1.NW_012115910v1 I 6 C 0 s calJac3.chr8 108079946 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701872 1 - 18371965 t i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1362377 1 + 3566421 t i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1867342 1 - 9267652 t i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12693014 1 + 14340318 t i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51734099 1 - 55844845 t i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e dasNov3.JH578441 1129630 1925 + 1446996 I a score=516286.000000 s hg38.chrUn_KI270749v1 38120 53 + 158759 at------ACAAACTACTTTTCAAATTTGCTACATCAA-TTTTTTAGTCTCCTAAAAATA s panTro5.chr1 101864379 59 - 228573443 atttttATACAAACTACTTTCAAAATTTACTACATGAA-TTTTTTAGTCTCCTAACAATA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493678 60 - 162613886 atttttATACAAACTACTTTTTGAATTTGCTACATCAATTTTTTTAGTCTCCTAAAAATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 16322 53 - 126596 at------ACAAACTACTTTTCAAATTTGCTACATCAA-TTTTTTAGTCTCCTTAAAATA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55742328 60 + 99891981 atttttACACAAACTACTTTTCAAATTTGCTACATCAATTTTTTTAGTCCCCTAAAAATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439179 53 - 185818997 ------ATACAAACTACTTTTCAGATTTGCTACATCAATGTTTTTAGTCTCCT-AAAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67268809 53 + 192294377 ------ATACAAACTACTTTTCAGATTTGCTACATCAATGTTTTTAGTCTCCT-AAAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2750867 53 + 3123512 ------ATACAAACTACTTTTCAGATTTGCTACATCAATGTTTTTAGTCTCCT-AAAATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2471164 53 + 10077455 ------ATACAAACTACTTTTCAGATTTGCTACATCAATTTTTTTAGTCTCCT-AAAATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5679138 53 + 127223203 ------ATACAAACTACTTTTCAGATTTGCTACATCAATTTTTTTAGTCTCCT-AAAATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1123353 53 - 1799296 ------ATACAAACTACTTTTCAGATTTGCTACATCAATTTTTTTAGTCTCCT-AAAATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1722049 53 + 6934359 ------ATACAAACTACATTTCAGATTTGCTACATCAATTTTTTTAGTCTCCT-AAAATA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108079947 59 - 128169293 ATTTTTATACAAATTACTTTTTGAATTTGCTACACCAA-TTTTTTAGTCTCCTAAAAATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 701873 58 - 18371965 atttttGCACAAATTACTTTTCAAATTTGCTGCACCAA--TTTTTAGTCTCCTAAAAATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1362378 59 + 3566421 gtttttGTACAAATTACTTTTCAAATTTGCTACACCAA-TTTTTTAGTCTCCTAAAAATA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1867343 59 - 9267652 atttttGTACAAATTACTTTTCAAATTTGCTACACCAA-TTTTTTAGTCTCCTAAAAATA i aotNan1.NW_018514471v1 C 0 I 147 s otoGar3.GL873564 12693015 59 + 14340318 atttttgtgcaaactagttttcgaatttgttaggtcct-ttgcttattctccccaaaaca i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51734100 58 - 55844845 atttttaaataacttaattttcaaatttgctagggca--tttATCAGTCTCCTAAAGATA i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66724799 299 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e dasNov3.JH578441 1129630 1925 + 1446996 I a score=32538.000000 s hg38.chrUn_KI270749v1 38173 9 + 158759 TATTCA---TTT s panTro5.chr1 101864438 9 - 228573443 TATTCA---TTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493738 9 - 162613886 TGTTCA---TTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 16375 9 - 126596 TATTCA---TTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55742388 6 + 99891981 TG---G---TTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439232 9 - 185818997 TGTTCA---TTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67268862 8 + 192294377 TGTTCA----TT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2750920 9 + 3123512 TGTTCA---TTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2471217 7 + 10077455 TGTTCA-----T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5679191 12 + 127223203 TGTTCATTTTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1123406 8 - 1799296 TGTTCA----TT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1722102 10 + 6934359 TGTTCT--TTTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108080006 9 - 128169293 TGTTCA---TGT i calJac3.chr8 C 0 I 4 s saiBol1.JH378145 701931 9 - 18371965 TGTTCA---TGT i saiBol1.JH378145 C 0 I 6 s cebCap1.NW_016107540v1 1362437 9 + 3566421 TGTTCA---TGT i cebCap1.NW_016107540v1 C 0 I 77 s otoGar3.GL873564 12693074 9 + 14340318 tattca---tgt i otoGar3.GL873564 C 0 I 2 s canFam3.chr18 51734158 7 - 55844845 TATTCA---T-- i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66724799 299 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e dasNov3.JH578441 1129630 1925 + 1446996 I a score=369439.000000 s hg38.chrUn_KI270749v1 38182 60 + 158759 TTTTTAAAATTTTTTGAAATTAAATGAGCTTTATAATCTAACAGTGATATTTCTACTAAT- s panTro5.chr1 101864447 60 - 228573443 TTTAAAAAAATTTTTGAAAGCAAATATGCTTTATAATCTAACAGTGATATTTCTACTAAA- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493747 58 - 162613886 TTT--AAAATTTTTTTAAAGCAAATGTGCTTTATAATCTAACAATGATATTTCTACTAAT- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 16384 59 - 126596 TTT-TTTAATTTTTTGAAAGCAAATGTGCTTTATAATCTAACAGTGATATTTCTACTAAT- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55742394 60 + 99891981 TTTAAAAAATTTTTTTAAAGCTAATGTGCTTTGTAATCTAACAATGATATTTCTACTAAT- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439241 53 - 185818997 TTT-------TTTTTTAAAGCAAATGTGCTTTATGATCTAACAGTGATATTTCTGGTAAC- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67268870 53 + 192294377 TTT-------TTTTTTAAAGCAAATGTGCTTTATGATCTAACAGTGATATTTCTGGTAAC- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2750929 53 + 3123512 TTT-------TTTTTTAAAGCAAATGTGCTTTATGATCTAACAGTGATATTTCTGGTAAC- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2471224 53 + 10077455 TTT-------TTTTTTAAAGCAAATGTGCTTTATGATCTAACAGTGATATTTCTGGTAAC- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5679203 53 + 127223203 TTT-------TTTTTTAAAGCAAATGTGCTTTATGATCTAACAGTGATATTTCTGGTCAC- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1123414 53 - 1799296 TTT-------TTTTTTAAAGCAAATGTGCTTTATGATCTAACAGTGATATTTCTGGTAAC- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1722112 53 + 6934359 TTT-------TTTTTTAAAGCAAATGTGCTTTATGATCTAACAGTGATATTTCTGGTAAC- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108080019 53 - 128169293 TAT-------TTTTTAAAAGCAAATGTGCTTTATATTCTAACAGTGGTATTTCCAGTAAC- i calJac3.chr8 I 4 I 2 s saiBol1.JH378145 701946 53 - 18371965 TTT-------TTttttaaagcaaacgtgctttatattctaacagtgatatatccagtaac- i saiBol1.JH378145 I 6 I 2 s otoGar3.GL873564 12693085 53 + 14340318 ttc-------cttttttaagcagattcattttataatctaacattgctatttatagtaac- i otoGar3.GL873564 I 2 I 2 s canFam3.chr18 51734165 24 - 55844845 ----------------------AATGT---------------AATAATGTTTCCAGTAACT i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66724799 299 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e cebCap1.NW_016107540v1 1362446 77 + 3566421 I e dasNov3.JH578441 1129630 1925 + 1446996 I a score=1538898.000000 s hg38.chrUn_KI270749v1 38242 173 + 158759 -GAACCTTTGTGGATCGGTTTGTACTCTTTTTCTGCTTTCCTTTCA----AATGGTAGAATATCATTTCCTTGCATACTTAG-ATGCCTTTGAATGACAAAGATTTATTTTTCTCTGAAAATTATTATTGTGCACTTTTGCATATTAGTAAGAAGAAAATTTGccaaagagaatttgaa s panTro5.chr1 101864507 173 - 228573443 -GAACCTTTGTGTATCTGTTTGTACTCTTTTTCTGCTTTCCTTTCA----AATGGTGGAATATCATTTCCTTGCATACTTAG-ATGCCTTTGAATGACAAATATTTATTTTTCTCTGAAAATTATTTTTGTGCACTTTTGTGGATTAGTAAATAGAAAATTTGCCAAAGAGAATTTCAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493805 173 - 162613886 -GAACTTTTGTGGATCTGTTTGTACTCTTTTTCTGCTTCCCTTTCA----AATGGTGGAATATCATTTCCTTGTTTACTTAG-ATGCCTTTGAATGACAAATATTTATTTTTCTTTGAAAATTATTTTTGTGCACTTTTGAGGATTAGTTGGAAGAAAATTTGCCAAAGAGAATTTGAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 16443 173 - 126596 -GAACCTTTGTGGATCTGTTTGTACTCTTTTTCTGCTTTCCTTTCA----AATGGTGGAATATCATTTCCTTGTGTACTTAG-ATGTCTTTGAATGACAAAGGTTTATTTTTCTCTGAAAATTATTATTGTGCACTTTTGCATATTAGTAAGAAGAAAATTTGCCAAGGAGAATTTGAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55742454 172 + 99891981 -GAACCTTTGTGGATCTGTTTGTACTCTTTTTCTGCTTTGCTTTCA----AATGGTGGAATATCATTTCCTTGTGTACTTAG-ATGCCTTTGAATGACAAATATTTATTTTTCTTTGAAAATTATTTTTGTGCACTTTTGAGGATT-GTTGGAAAAAAATTTGccaaagagaatttgaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439294 173 - 185818997 -AAACCTTTGCAGATCTGTTTGTACTCTTTTTCTGCTTTCCTTTCA----AACAGTGGAATATCATTTCCTTGTGTACTTAG-AAGCCTTTGAATGATAAATATTTATTTTTCTTAGAAAATTATTTTTGTGCACTTTTGAGGATTAGTATGAGGAAAATATGCCAAAGAGAATTTCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67268923 173 + 192294377 -AAACCTTTGCAGATCTGTTTGTACTCTTTTTCTGCTTTCCTTTCA----AACAGTGGAATATCATTTCCTTGTGTACTTAG-AAGCCTTTGAATGATAAATATTTATTTTTCTTAGAAAATTATTTTTGTGCACTTTTGAGGATTAGTATGAGGAAAATATGCCAAAGAGAATTTCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2750982 169 + 3123512 -AAACCTTTGCAGATCTGTTTGTACTCTTTTTCTGCTTTCCTTTCA----AACAGTGGAATATCATTTCCTTGTGTACTTAG-AAGCCTTTGAATG----ATATTTATTTTTCTTAGAAAATTATTTTTGTGCACTTTTGAGGATTAGTATGAGGAAAATATGCCAAAGAGAATTTCAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2471277 173 + 10077455 -AAACCTTTGCAGATCTGTTTGTACTCTTTTTCTGCTTTCCTTTCA----AACGGTGGAATATCATTTCCTTGTGTACTTAG-AAGCCTTTGAATGATAAATATTTATTTTTCTTAGAAAATTATTTTTGTGCACTTTTGAGGATTAGTATGAGGAAAATATGCCAAAGAGAATTTCAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5679256 174 + 127223203 -AAACCGTTGTAGATTTGTTTGTACTCTTTTTCTGCTTTCTTTTCA----AACGGTGGAATATCATTTCCTTGTGTACTTAGAAAGCCTTTGAATGATAAATATTTATTTTTCTTAGAAAATTATTTTTGTGCACTTTTGAGGATTAGTATGAAGAAAATATGCCAAAGAGAATTTCAA i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012105809v1 1123467 169 - 1799296 -AAACCTTTGTAGATCTGTTTGTACTCTTTTTCTGCTTTCCTTTCA----AATGGTGGAATATCATTTCCTTGTGTACTTAG-AAGCCTTTGAATG----ATATTTATTTTTCTTAGAAAATTATTTTTGTGCACTTTTGAGGATTAGCATGAGGAAAATATGCCAAAGAGAATTTCAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1722165 174 + 6934359 -AAACCTTTGTGGATCTGTTTGCACTCTTTTTCTGCTTTCCTTTCA----AACGGTGGACTATCATTTCCTTGTGTACTTAGAAAGCCTTTGAATGATAAATATTTATTTTTCTTAGAACATTATTTTTGTGCACTTCTGAGGATCAGTATGAAGAAAATATGCCAAAGAGAATTTCAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108080074 173 - 128169293 -GAATCTTTATAGAGCTGTTTATACTCTTTTGCTGCTTTCCTTTCA----AATGGTGAAGTATCATTTCCTTGTGTACTCAG-ATGCTTTTGAATGAAAAATATTAATTTTTCTTAGAAAATTATTTATGTGCACTGTTGAGAATTAGTATGAAGACAATTTGccaaagagaatttgaa i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 702001 173 - 18371965 -gaatctttacagatctgtttatactcttttgctgctttcctttca----aatggtggagtatcattttcttgtgtactcag-atgcttttgaatgaaaaatattaatttttcttagaaaattatttttgcacacttttgaggattagtatgaagacaatttgccaaagagaatttgaa i saiBol1.JH378145 I 2 C 0 s cebCap1.NW_016107540v1 1362523 173 + 3566421 -GAATCTTTATAGAGCTGTTTATACTCTTTTGCTGCTTTCCTTTCA----AATGGTGGCATATCATTTCCTTGTGTGCTCAG-ATGCTTTTGAATGAAAAATATTAATTTTTCTTAGAAAATTATTTTTGTACAGTTTTGAGGATTAGTATGAAGACAATTTGCCAAAGAGAATTTGAA i cebCap1.NW_016107540v1 I 77 C 0 s otoGar3.GL873564 12693140 170 + 14340318 -aagtctctgtgaatctgtttatg--ttttttctgctctttttataaatgaatgatagagcatcattttcttatatatttag-atatttttaaataacaa-----tcttttttttagaaaagtatttttgtgcacttttgaggattacacggaagtgaattgatcaaagaggatttgaa i otoGar3.GL873564 I 2 C 0 s canFam3.chr18 51734189 144 - 55844845 GAATTCTTTGTG---TTTTTTATATATTTTTCCAGATTTTT---------AAAAATTGACTATCATTT------------AG-AGATTTTTGAAAGCCAAACATTCATTTTTATTAGAAAATTG----CATGCA-TTTTGAGGATTAGT-----GGCAACTGAAcaaagaggatttgaa i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66724799 299 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e dasNov3.JH578441 1129630 1925 + 1446996 I a score=13923.000000 s hg38.chrUn_KI270749v1 38415 1 + 158759 t s panTro5.chr1 101864680 1 - 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493978 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 16616 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66725098 1 - 72422247 t i ponAbe2.chrUn I 299 I 3411 s nomLeu3.chr17 55742626 1 + 99891981 t i nomLeu3.chr17 C 0 I 1 s rheMac8.chr3 133439467 1 - 185818997 T i rheMac8.chr3 C 0 I 1 s macFas5.chr3 67269096 1 + 192294377 T i macFas5.chr3 C 0 I 1 s macNem1.NW_012011522v1 2751151 1 + 3123512 T i macNem1.NW_012011522v1 C 0 I 1 s cerAty1.NW_012000909v1 2471450 1 + 10077455 T i cerAty1.NW_012000909v1 C 0 I 1 s chlSab2.chr21 5679431 1 + 127223203 T i chlSab2.chr21 I 1 I 1 s manLeu1.NW_012105809v1 1123636 1 - 1799296 T i manLeu1.NW_012105809v1 C 0 I 1 s colAng1.NW_012115910v1 1722339 1 + 6934359 T i colAng1.NW_012115910v1 C 0 I 1 s calJac3.chr8 108080247 1 - 128169293 t i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 702174 1 - 18371965 t i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 1362696 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 I 1 s otoGar3.GL873564 12693310 1 + 14340318 t i otoGar3.GL873564 C 0 I 1 s canFam3.chr18 51734333 1 - 55844845 t i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e dasNov3.JH578441 1129630 1925 + 1446996 I a score=1319577.000000 s hg38.chrUn_KI270749v1 38416 138 + 158759 ---ttgt--t-gtgagtcttctaaaggcaccaccattctgggaccacattatattaattcttggcctaaaggtgttt-------------ggacATATGTTTGGACTGCACATTTAAACGATTTTTAAATTAATTGCTGTAAATCATTAATGATTGA s panTro5.chr1 101864681 139 - 228573443 ---TTTT--TTGTGATTCTACTAAAGGCACCACCATTCTGGGACCACATTATGTTAATTCTTGGCCTAAAGGTGTTc-------------agacgtatgtttggactgcacatttaaacaatttttaaattagttgcTGTAAATCATTAACGATTGA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108493979 138 - 162613886 ---ATTT--T-GTGAGTCTACTAAAGGCACCACCATTCTGGGACCACATTATGTTAATTCTTGGCCTAAAGGTGTTT-------------GGACGTATGTTTGGACTGCACAATTAAACACTTTTTAAATTAATTGCTCTAAATCATTAAGGATTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 16617 137 - 126596 ---TTTT--T--TGAGTCTACTAAAGGCACCACCATTCTGGGACCACATTATATTAATTCTTGGCCTAAAGGTGTTT-------------GGACGTATGTTTGGACAGCACATTTAAACAATTTTTAAATTAATTGCTGTAAATCATTAATGATTGA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55742628 138 + 99891981 ---tttt--t-gtgagtctactaaaggcaccaccattctgggaccacattatgttaattcttggcctaaaggtgttt-------------ggacATATGTTTGGACCGCACAATTAAACAATATTTAAATTAATTGCTGTAAATCATTAATGATTGA i nomLeu3.chr17 I 1 C 0 s rheMac8.chr3 133439469 151 - 185818997 ---TTTT--C-ATGAGTCTACTAAAGGCACCCCTATTCTGGGACCACATTATGTTAATTCTTGGCCTAAAGGTGTTTTGGACTTCCCAAGTGACATATGTTTGGACTGCACATTTAACCAATTTTTAAATTAATTGCTGTAAATCATTAATGATTGA i rheMac8.chr3 I 1 C 0 s macFas5.chr3 67269098 151 + 192294377 ---TTTT--C-ATGAGTCTACTAAAGGCACCCCTATTCTGGGACCACATTATGTTAATTCTTGGCCTAAAGGTGTTTTGGACTTCCCAAGTGACATATGTTTGGACTGCACATTTAAACAATTTTTAAATTAATTGCTGTAAATCATTAATGATTGA i macFas5.chr3 I 1 C 0 s macNem1.NW_012011522v1 2751153 151 + 3123512 ---TTTT--C-ATGAGTCTACTAAAGGCACCCCTATTCTGGGACCACATTATGTTAATTCTTGGCCTAAAGGTGTTTTGGACTTCCCAAGTGACATATGTTTGGACTGCACATTTAAACAATTTTTAAATTAATTGCTGTAAATCATTAATGATTGA i macNem1.NW_012011522v1 I 1 C 0 s cerAty1.NW_012000909v1 2471452 151 + 10077455 ---TTTT--C-ATGAGTCTACTAAAGGCACCCCTATTCTGGGACCACATTATGTTAATTCTTGGCCTAAAGGTGTTTTGGACTTCCCAAGTGACATATGTTTGGACTGCACATTTAAACAATTTTTAAATTAATTGCTGTAAATCATTAATGATTGA i cerAty1.NW_012000909v1 I 1 C 0 s chlSab2.chr21 5679433 151 + 127223203 ---TTTT--T-GTGAGTCTACTAAAGGCACCACTATTCTGGGACCACATTATGTTAATTCTTGGCCTAAAGGAGTTTTGGGCTTCCCAAGTGACATATGTTTGGACTGCACATTTTAACAATTTTTAAATTAATTGCTGTAAATCATTAATGATTGA i chlSab2.chr21 I 1 C 0 s manLeu1.NW_012105809v1 1123638 151 - 1799296 ---TTTT--C-ATGAGTCTACTAAAGGCACCCCTATTCTGGGACCACATTATGTTAATTCTTGGCCTAAAGGTGTTTTGGACTTCCCAAGTGACATATGTTTGGACTGCACATTTAAACAATTTTTAAATTAATTGCTGTAAATCGTTAATGATTGA i manLeu1.NW_012105809v1 I 1 C 0 s colAng1.NW_012115910v1 1722341 153 + 6934359 ---TTTTTGT-GTGAGTCTACTAAAGGCACCACAATTCTGGGACCACATTATGTTAATTCTTGGCCTAAAGGTGTTTTGGACTTCCCAAGTGACATATGTTTGGACTGCCCATTTAAACAATTTTTAAATTAACTGCTGTAAATCATTAATGATTGA i colAng1.NW_012115910v1 I 1 C 0 s calJac3.chr8 108080249 150 - 128169293 ---tctt--t-gtgagtctactaaaggaaccaccattctgggatcacattatgttaagtattggcctaaaggtgttttggacttcccaagtgacatatgtttggactgcaCATTTAAACCATTTCT-AATTAATTGCCATAAAGCATTAATGATTGG i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 702176 150 - 18371965 ---tatt--t-gtgagtctactaaaggaaccatcattctgggatcacattatgttaagtattggcccaaaggtgttttgggcttcccaagtgacatatgtttggaccacacatttaaacaatttct-aattaattgccgtaaatcattaatgattgg i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1362698 150 + 3566421 ---TCTT--T-GTGAGTCTAGTAAAGGAACCACCGTTCTGGGATCACATTATGTTAAGTATTGGCCCAAAGGTGTTTTGGACTTCCCAAGTGACATATGTTTGGACTACACATTTAATCCATTTAT-AATTAATTGCCATACATCATTAATGATTGG i cebCap1.NW_016107540v1 I 1 C 0 s otoGar3.GL873564 12693312 142 + 14340318 ---tgct--t-ctgagtctcctactgacaccctcattctgggatcactggatattaattctttgcctcagggtttttttgagccc-----agtgttaagcttgggctgtacctttaaacaatgcctaaatt-gttgctgta-atccttaatgatt-- i otoGar3.GL873564 I 1 C 0 s canFam3.chr18 51734334 151 - 55844845 ttgtttc--t-gtgagtctcttaaagacatcactgttctgggaccaccttatactaattcttgacttaagaattttttggatttcccaagtggC--ATGTTTGGGCTGCACATATAAACAATGCCTACATT-GCTGCTATTAATTCTTTATGATTTA i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e dasNov3.JH578441 1129630 1925 + 1446996 I a score=604526.000000 s hg38.chrUn_KI270749v1 38554 59 + 158759 GTT-TCTTTAAATCCGTCCAATCTCAAGTCATTTTTATTTGCCATTTCCAGGGAATGTGA s panTro5.chr1 101864820 59 - 228573443 GTT-TCTTTAAGTCTGTCCAATCTCAAGTCATTTTTATTTGCCATTTCCAGGGAATGTGA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494117 59 - 162613886 GTT-TCTTTAAATCTGTCCAATCTCAAGTCATTTTTATTTGCCATTTGCAGGGAATGTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 16754 59 - 126596 GTT-TCTTTAAATCTCTCCAATCTCAAGTCATTTTTATTTGCCATTTCCAGGGAATGTGA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55742766 59 + 99891981 GTT-TCTTTAAATCTGTCCAATCTCAAGTCATTTTTATTTGCCATTTGCAGGAAATGTTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439620 59 - 185818997 GTT-TCTTTAAATCTGTCCAATCTCAAGTCATTTTTATTTGCCATTTTCAGGGAAAGTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67269249 59 + 192294377 GTT-TCTTTAAATCTGTCCAATCTCAAGTCATTTTTATTTGCCATTTTCAGGGAAAGTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2751304 59 + 3123512 GTT-TCTTTAAATCTGTCCAATCTCAAGTCATTTTTATTTGCCATTTTCAGGGAAAGTGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2471603 59 + 10077455 GTT-TCTTTAAATCTGTCCAATCTCAAGTCATTTTTATTTGCCATTTGCAGGGAATGTGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5679584 59 + 127223203 GTT-TCTTTAAATCTGTCCAATCTTAAGTCATTTTTATTTGCCATTTTCAGGGAATGTGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1123789 59 - 1799296 GTT-TCTTTAAATCTGTCCAATCTCAAGTCATTTTTATTTGCCATTTGCAGGGAATGTGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1722494 59 + 6934359 GTT-TCTTTAAATCTGTCCAATCTTAAGTCATTTTTATTTGCCATTTGCAGGGAATGTGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108080399 59 - 128169293 TTT-TCTTTTAATCTGTCCAATCTCAAATCATTTTTATTTGCCATTTGCAGGGAATGTGG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 702326 59 - 18371965 ttt-tcttttaatgtgtccaatctcaaatcatttttatttgccatttgcagggaatgtgg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1362848 59 + 3566421 TTT-TCTTTTAATCTGTCCAATGTCAAGTCATTTTTATTTGCCATTTGCAGGGAATGTGA i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12693454 57 + 14340318 -tt-tcttt-gatgtgtttagtctcaagtcaactttattcacaatttcctgggaatgtga i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51734485 59 - 55844845 TTTCTCTTTTAATCTGTTCAGTTTTAAGTCAAC-TTACTTACAATTTCCTGGCGGTGTTG i canFam3.chr18 C 0 I 189 s dasNov3.JH578441 1131555 57 + 1446996 gct-gcatttaatctgctaaacctccagtcagccttaatAGTATGTTTCTG--AAGGTGA i dasNov3.JH578441 I 1925 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=2671662.000000 s hg38.chrUn_KI270749v1 38613 277 + 158759 ----AATGGGACTAATTTACCTCTGATTCTACTTTATACTGAGGATATAA-ATTT-TGGTCCTAGCTTTA---GGGAAGATCTCCTGTGTGATGCCCT-ATCTTGGGAAAAACTATGTATTTCTTTACTGTCCTATGTGATGTATGACAGTAGG--AATCTGCACTCATTCATTTTGCTACATGTCTGTAGGGCAAAATCAGTT-TCAGTGTTTAGGTGTAT--------TTTGTCTGCTCCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACT-TTT-----TTTGTGAACATACCAGTGC s panTro5.chr1 101864879 278 - 228573443 ----AATGGGACTAATTTACCTCTGATTCTTCTTTATACTGAGGATATAA-ATTT-TGGTCCTAGCTTTA---GGGAGGAGCTCCTGTGTGATGCCCT-ATCTTGGGAAAAACTACGTATTTTTTTACTGTCCTATGTGATGTATGACAGTAGG--AATCTGCACTCATTCATTTTGCTACATGTCTGTAGGGCAAAATCAGTT-TCGGTGTTTAGTTATAT--------TTTGTCTGCTCCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACT-TTT----ATTTGTGAACATACCAGTGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494176 277 - 162613886 ----AATGGGACTGATTTACCTCTGATTCTTCTTTATACTGAGGATATAA-ATTT-TGGTCCTAGCTTTA---GGGAGGAGCTCCTGTGTGATGCCCT-ATCTTGGGAAAACCTATCTATTTCTTTACTGTCCTATGTGATGTATGACAGGAGG--AATCTGCACTCATTCATTTTGGTACATGTCCGTAGGTCAAAATCAGTT-TCAGTGTTTAGGTATAT--------TTTGTCTGCTCCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACT-TTT-----TTTGTTAACATACCAATGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 16813 277 - 126596 ----AAT-GGACTAATTTACCTCTGATTCTTCTTTATACTGAGGATATAA-ATTT-TGGTCCTAGCTTTA---GGGAAGAGCTCCTGTGTCATGGCCT-ATCTTGGGAAAAACTATGTATTTCTTTACTGTCCTATGTGATGTATGACAGTAGG--AATCTGCACTCATTTATTTTGCTACATGTCCGTAGGGCAAAATCAGTT-TCAGTGTTTAGGTGTAT--------TTTGTCTGCTCCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACT-TTT----TTTTGTGAACATACCAATGC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55742825 272 + 99891981 ----AATGGGACTAATCTGCCTCTGATTCTTCCTTATACTGAGGATATAA-ATTT-TGGTCCTAGCTTTA---GGGAGGAGCTCCTGTGTGATGCCCT-ATCTTGGGAAAAACTATATATTTCTTTACTGTCCTATGTGATGTATGAAAGTAGG--AATCTACACTCATTCTTTTTGGTACATGTCCATAGGGCAAAATCAGTT-TCAGTGTT------TAT--------TTTGTCTGCTCCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACT-TTT----TTGTGTGAACATTCCAATGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439679 279 - 185818997 ----AATGGGACTAATTTACCTCTGATTCTTCTTCATATTGAGAATATAA-ATTT-TGGTCCTAGCTTTA---GGGAGGAGCTCCTGTGTGATGCCCT-ATCTTGGGAAAAGCTATATATTTCTTTACTGTCCTATGTGATGTATGACAGTAGG-AAATCCACACTCATTCATTTTGGTACATGTCCGTAGGGAAAAATCAGTC-TCGGTGTTTAGGTATAT--------TTTGTCTGCTCCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACC-TTT----TTTTGTGAACATACCAATGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67269308 279 + 192294377 ----AATGGGACTAATTTACCTCTGATTCTTCTTCATATTGAGAATATAA-ATTT-TGGTCCTAGCTTTA---GGGAGGAGCTCCTGTGTGATGCCCT-ATCTTGGGAAAAGCTATATATTTCTTTACTGTCCTATGTGATGTATGACAGTAGG-AAATCCACACTCATTCATTTTGGTACATGTCCGTAGGGAAAAATCAGTC-TCGGTGTTTAGGTATAT--------TTTGTCTGCTCCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACC-TTT----TTTTGTGAACATACCAATGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2751363 279 + 3123512 ----AATGGGACTAATTTACCTCTGATTCTTCTTCATATTGAGAATATAA-ATTT-TGGTCCTAGCTTTA---GGGAGGAGCTCCTGTGTGATGCCCT-ATCTTGGGAAAAGCTATATATTTCTTTACTGTCCTATGTGATGTATGACAGTAGG-AAATCCACACTCATTCATTTTGGTACATGTCCGTAGGGCAAAATCAGTC-TCGGTGTTTAGGTATAT--------TTTGTCTGCTCCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACC-TTT----TTTTGTGAACATACCAATGC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2471662 280 + 10077455 ----AATGGGACTAATTTACCTCTGATTCTTCTTCATATTGAGAATATAA-ATTT-TGGTCCTAGCTTTA---GGGAAGAGCTTCTGTGTGATGCCCT-ATCTTGGGAAAAGCTATATATTTCTTTACTGTCCTATGTGATGTATGACAGTAGG-AAATTCACACTCATTCATTTCGGTACATGTCCGTAGGGCAAAATCAGTT-TCGGTGTTTAGGTATAT--------TTTGTCTGCTCCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACCTTTT----TTTTGTGAACATACCAATGC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5679643 280 + 127223203 ----AATGGGACTAATTTACCTCTGATTCTTCTTCATATTGAGAATATAC-ATTT-TGGTCCTAGGTTTA---GGGAGGAGCTCCTGTGTGATGCCCT-ATCTTGGGAAAAGCTATATTTTTCTTTACTGTCCTATGTGACGTATGACAGTAGG-AAATCCACACTCATTCATTTTGGTACATGTCCGTAGGGCAAAATCAGTT-TTGGTGTTTAGGTATAG--------TTTGTCTGCTCCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACCTTTT----TTTTGTGAACATACCAATGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1123848 279 - 1799296 ----AATGGGACTAATTTACCTCTGATTCTTCTTCATATTGAGAATATAA-ATTT-TGGTCCTAGCTTTA---GGGAGGAGCTCCTGTGTGATGCCCT-ATCTTGGGAAAAGCTATATATTTCTTTACTGTCCTATGTGATGTATGACAGTAGG-AAATTCACACTCATTCATTTTGGTATATGTCCGTAGGGCAAAATCAGTT-TCGGTGTTTAGGTATAT--------TTTGTCTGCTCCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACC-TGT----TTTTGTGAACATACCAATGC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1722553 279 + 6934359 ----AATGGGACTAATTTACCTCTGATTCTTCTTTATTTTGAGCATATAA-ATTT-TGGTCCTAGCTTTA---GGGAGGAGCGCCTGTGTGATGCCCT-ATCTTGGGAAAAGCTATATATTTCTTTACTGTTCTATGTGGTGTATGACAGTAGG-AAATCCACACTCATTCATTTTGGTACATGTCCGTAGGGCAAAATCAGTT-TCGGTGTTTAGGTACAT--------TTTGTCTGCTTCCTGCATTCCCATGGTTTT--------------------GACCTTATATTTT--------ACC-TTT----TTTTGTGAACATACTAATGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108080458 279 - 128169293 ----AATGCAACTAATTTACCTCTGATTTTTCTTTATACTGAGGATGTTA-ATTT-TCGTCCTAGCTTTAT--GGAAGGAGCTCCTGTGTGATGCCCT-TCCTTGGGGAAAGCTATATATTTCTTTACTGTCCTATGTAAAGTATGACAGTAGG-AAATCCATGCTCATTCATTTTGGTACATGTCTGTAGGACAAAATCAGTT-TCAGTGTTTAGGTATAT--------TTTGTCTGCTCCCTACATTCCCATAGTTTT--------------------GACTTTATATTTT--------ACT-TTT-----TTTGTGAGCATACCAATGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 702385 279 - 18371965 ----aatgggactaatttacctctgattcttctttatactgaggatgtaa-actt-tcgtcctagctttat--gacaggagctcctgtgtgatgccct-accttgGGAAAAGCTATATATTTCTTCACTGTCCTATGTAAAGTATGACAGTAGG-AAATCCATGCTGATTCATTTTGGTATATGTCTGTAGGGCAAAATCTGTT-TCAGTGTTTAGGTACAT--------TTTGTCTGCTCCCTACATTCCCATAGTTTT--------------------GACTTTACATTTT--------ACA-TAT-----TTTGTGAGCATATCAATGC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1362907 279 + 3566421 ----AATGGGACTAATTTACCTCTGATTCTTCTTTATACTGAGGATGTAA-ATTT-TCGTCCTAGCTTTAT--GGGAGGAGCTCCTGTGTGATGCCCT-ACCTTGGGAAAAGCTATATATTTCTTTACTGTGCTATGTAAAGTATGACAGTAGG-AAATCCATGCTCATTCATTTTGGTACATGTCTGTCGGGCAAAATCAGTT-TCAGTGTTTAGGTATAT--------TTTGTCTCCTCCCTACATTCCCATACTTTT--------------------GACTTTACATTTT--------ACT-TTT-----TTTGTGAGCATACCAATGC i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12693511 268 + 14340318 ----tatgaggctgatttgcttctcacccatctttatactgaggacttaacattt-tggtcacagctttacaagacaaggtatcttgtaccacatcct-atcttgggaaag---------------acccacctgtgtcctgcatgataccaagcaaactcgagctcATTCATGTCAGTAAATTTCCTAGGGGCAAAATCAGTTCCCAGTGTTAAGCATGTT--------TTTTTCGGGTGCCTGTGCTCACATAGTTTT--------------------GCCCTAAAATTTT--------ATT-ATT----ATTTGAGA--ATATTGATGC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51734733 319 - 55844845 ----AACAGGGCTGATTTATTTCTGATTCATTTTTACAATGAAG-TGTAA-TCTT-TAGAATT--CTTTAT--GGAAAAGGATCCTCTATGTGGCTCTCAGCTTAGAAAAGGCTTAATATTTGCTTATTATTCTATCTGCTGCATGACACTAAGCAAAGTCAAACCTATTCAGTTTAGTACATGTCTTTAGGGCAAAACCAGTT-CCAGTGTGAGGTTGttttctttttctttttctttttctttctttctttttttttttttttctcttGGTCCCTGAAGAATTCAGACTTTGGCCTAAAACA-TTTACTACTTTATGAGAATCTTAATGC i canFam3.chr18 I 189 C 0 s dasNov3.JH578441 1131612 285 + 1446996 AGAATATGAAACCTAGTTACATCTGATTCATCTTTATACTAAGGATGTAG-CTTTGTATTCCCAGCTATATA-GCGAAGGACCCCTGCATGCCCTCCT-ATCTTGGGACATGACCAATAATTGTTTTCTATCCTATGTGCTTCCTGATGCTAAGAAAACCTAAGTGCACTCATTTTAGCACAGGTCCTTACAGCAAGTTCATTT-CCAGTGTT-AGGTATAT--------TTT-CCTGAT-CCTGTATTCACATAGTATT--------------------AGCCTAAAAGTTC--------CTT-ACT---GTCTTGGCAGAATATGAATGC i dasNov3.JH578441 C 0 I 4390 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=4927.000000 s hg38.chrUn_KI270749v1 38890 8 + 158759 TTCAAATT s panTro5.chr1 101865157 8 - 228573443 TTCAAATT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494453 8 - 162613886 TTCAATTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17090 8 - 126596 TTCAATAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743097 7 + 99891981 TTCAA-TT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439958 6 - 185818997 TTCAAT-- i rheMac8.chr3 C 0 I 1 s macFas5.chr3 67269587 6 + 192294377 TTCAAT-- i macFas5.chr3 C 0 I 1 s macNem1.NW_012011522v1 2751642 6 + 3123512 TTCAAT-- i macNem1.NW_012011522v1 C 0 I 1 s cerAty1.NW_012000909v1 2471942 6 + 10077455 TTCAAT-- i cerAty1.NW_012000909v1 C 0 I 1 s chlSab2.chr21 5679923 6 + 127223203 TTCAAA-- i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012105809v1 1124127 6 - 1799296 TTCAAT-- i manLeu1.NW_012105809v1 C 0 I 1 s colAng1.NW_012115910v1 1722832 6 + 6934359 TTCAAT-- i colAng1.NW_012115910v1 C 0 I 1 s calJac3.chr8 108080737 5 - 128169293 TTCAA--- i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 702664 5 - 18371965 TTCAA--- i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 1363186 5 + 3566421 TTCAA--- i cebCap1.NW_016107540v1 C 0 I 1 s otoGar3.GL873564 12693779 8 + 14340318 TTTGAGTT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51735052 8 - 55844845 TTTTCTTT i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e dasNov3.JH578441 1131897 4390 + 1446996 I a score=63053.000000 s hg38.chrUn_KI270749v1 38898 5 + 158759 TTTTT s panTro5.chr1 101865165 5 - 228573443 TTTTC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494461 5 - 162613886 TTTTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17098 5 - 126596 TTTTC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743104 5 + 99891981 TTTTC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439965 5 - 185818997 TTTTC i rheMac8.chr3 I 1 C 0 s macFas5.chr3 67269594 5 + 192294377 TTTTC i macFas5.chr3 I 1 C 0 s macNem1.NW_012011522v1 2751649 5 + 3123512 TTTTC i macNem1.NW_012011522v1 I 1 C 0 s cerAty1.NW_012000909v1 2471949 5 + 10077455 TTTTC i cerAty1.NW_012000909v1 I 1 C 0 s chlSab2.chr21 5679930 5 + 127223203 TTTTC i chlSab2.chr21 I 1 C 0 s manLeu1.NW_012105809v1 1124134 5 - 1799296 TTTTC i manLeu1.NW_012105809v1 I 1 C 0 s colAng1.NW_012115910v1 1722839 5 + 6934359 TTTTC i colAng1.NW_012115910v1 I 1 C 0 s rhiRox1.KN300005v1 666624 5 - 4311341 TTTTC i rhiRox1.KN300005v1 N 0 C 0 s calJac3.chr8 108080743 5 - 128169293 TTTAC i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 702670 5 - 18371965 TTTTC i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1363192 5 + 3566421 TTCTC i cebCap1.NW_016107540v1 I 1 C 0 s otoGar3.GL873564 12693787 5 + 14340318 TTTTC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51735060 5 - 55844845 TTTTC i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e dasNov3.JH578441 1131897 4390 + 1446996 I a score=-460.000000 s hg38.chrUn_KI270749v1 38903 1 + 158759 -G s canFam3.chr18 51735065 1 - 55844845 C- i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 666629 0 - 4311341 C e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e gorGor5.CYUI01000522v1 17103 0 - 126596 C e tarSyr2.KE946558v1 996285 1111 - 1121937 I e otoGar3.GL873564 12693792 0 + 14340318 C e manLeu1.NW_012105809v1 1124139 0 - 1799296 C e macNem1.NW_012011522v1 2751654 0 + 3123512 C e rheMac8.chr3 133439970 0 - 185818997 C e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e cebCap1.NW_016107540v1 1363197 0 + 3566421 C e dasNov3.JH578441 1131897 4390 + 1446996 I e saiBol1.JH378145 702675 0 - 18371965 C e calJac3.chr8 108080748 0 - 128169293 C e colAng1.NW_012115910v1 1722844 0 + 6934359 C e chlSab2.chr21 5679935 0 + 127223203 C e cerAty1.NW_012000909v1 2471954 0 + 10077455 C e macFas5.chr3 67269599 0 + 192294377 C e nomLeu3.chr17 55743109 0 + 99891981 C e panPan2.chr7 108494466 0 - 162613886 C e panTro5.chr1 101865170 0 - 228573443 C a score=101237.000000 s hg38.chrUn_KI270749v1 38904 11 + 158759 CAGTAATATTT s panTro5.chr1 101865170 11 - 228573443 CAGTAATATAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494466 6 - 162613886 CAGTAA----- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17103 11 - 126596 CAGTAATATAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743109 11 + 99891981 CAGTAATATAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439970 11 - 185818997 CAGTAATATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67269599 11 + 192294377 CAGTAATATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2751654 11 + 3123512 CAGTAATATAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2471954 11 + 10077455 CAGTAATATAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5679935 11 + 127223203 CAGTAATATAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124139 11 - 1799296 CAGTAATATAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1722844 11 + 6934359 CAGTAATATAA i colAng1.NW_012115910v1 C 0 C 0 s rhiRox1.KN300005v1 666629 11 - 4311341 CAGTAATATAA i rhiRox1.KN300005v1 C 0 C 0 s calJac3.chr8 108080748 11 - 128169293 CAGTAATAAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 702675 11 - 18371965 CAGTAATAAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363197 11 + 3566421 CAGTAATAAAA i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12693792 11 + 14340318 CAGTTACAGAA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51735066 11 - 55844845 TAGTCACAGAG i canFam3.chr18 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e dasNov3.JH578441 1131897 4390 + 1446996 I a score=15561.000000 s hg38.chrUn_KI270749v1 38915 1 + 158759 T s panTro5.chr1 101865181 1 - 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494472 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17114 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743120 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439981 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67269610 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2751665 1 + 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2471965 1 + 10077455 T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5679946 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124150 1 - 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1722855 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s rhiRox1.KN300005v1 666640 1 - 4311341 T i rhiRox1.KN300005v1 C 0 I 4517 s calJac3.chr8 108080759 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 702686 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363208 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12693803 1 + 14340318 T i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51735077 1 - 55844845 T i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1136287 1 + 1446996 T i dasNov3.JH578441 I 4390 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=783965.000000 s hg38.chrUn_KI270749v1 38916 81 + 158759 CAACTATATT---ATGAGAAAG--AGAAAAA--------------TTTTGATAAAACAC-AAATTTCATGTTTTCCTTCTCTAATTGGC---TTTTACTTAAAA------------ s panTro5.chr1 101865182 81 - 228573443 CAACTATATT---ATGAGAAAG--AGAAAAA--------------TTTTGATAAAACAC-AAATTTCATGTTTTCCTTCTCTAATTGGC---TTTTACTTAAAA------------ i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494473 75 - 162613886 CAACTATATT---ATAAGAAAG--AGAAAAA--------------TTTTGATAAAACAC-AAATTTCATGTTTTCCTACTCTAATTGGC---TTTTAC------------------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17115 81 - 126596 CAACTATACT---ATAAGAAAG--AGAAAAA--------------TTTTGATAAAACAC-AAATTTCATGTTTTCCAACTCTAATTGGC---TTTTATGTAAAA------------ i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743121 75 + 99891981 CAACTATATT---ATAAGAAAG--AGAAAAA--------------TTTTGATAAAACAC-AAATTTCATGTTTTCCTACTCTAATTGGC---TTTTAC------------------ i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133439982 75 - 185818997 CAACTATATT---ATAAGAAAG--AGAAAAA--------------TTTTGATAAAACAC-AAATTTCATGTTTTCCTACTCCAATTGGC---TTTTAC------------------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67269611 75 + 192294377 CAACTATATT---ATAAGAAAG--AGAAAAA--------------TTTTGATAAAACAC-AAATTTCATGTTTTCCTACTCTAATTGGC---TTTTAC------------------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2751666 75 + 3123512 CAACTATATT---ATAAGAAAG--AGAAAAA--------------TTTTGATAAAACAC-AAATTTCATGTTTTCCTACTCTAATTGGC---TTTTAC------------------ i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2471966 75 + 10077455 CAACTATATT---ATAAGAAAG--AGAAAAA--------------TTTTGATAAAACAC-AAATGTCATGTTTTCCTACTCTAATTGGC---TTTTAC------------------ i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5679947 73 + 127223203 CAACTATATT---ATAAGAA----AGAAAAA--------------TTTTGTTAAAACAC-AAATTTCATGTTTTCCTACTCTAATTGGC---TTTTAC------------------ i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124151 75 - 1799296 CAACTATATT---ATAAGAAAG--AGAAAAA--------------TTTTGATAAAACAC-AAATTTCATGTTTTCCTACTCTAATTGGC---TTTTAC------------------ i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1722856 75 + 6934359 CAACTATATT---ATAAGAAAG--AGAAAAA--------------TTTTGATAAAACAC-AAATTTCGTGTTTTCCTACTCTAATTGGC---TTTTAC------------------ i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108080760 75 - 128169293 CAACTATATT---TTAAGAAAG--AGAAAAA--------------TTTTGACAAAATGC-AAATTTCATATTTTCCTACTCTAATTGGC---TTTTAT------------------ i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 702687 78 - 18371965 CAACTATATT---ATAAGAAAG--AGAAAAA--------------TTTTGACAAAACAC-AAATTTCATATTTTCCTTCTCTAATTGGCTTTTTTTAC------------------ i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363209 70 + 3566421 CAACTA--------TAAGAAAG--AGAAAAA--------------TTTTGACAAAACAC-AAATTTCATATTTTCCTACTCTAATTGGC---TTTTAC------------------ i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12693804 75 + 14340318 CAACTACATA---ATAAAAAAC--AGATAAT--------------TTTTAACAAAACAC-AAATCCCATATTTTTCTATGCTAACTGGC---TTTTAC------------------ i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51735078 81 - 55844845 CAACTATATCAGAATTAGAAAGACAGAGAAA--------------TTTTGATAAAACACAAAACCGCATATTTACCTACTCTCATTGGC---TTTTAT------------------ i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1136288 98 + 1446996 CAATTATATT---ATCAGAAAC--AGAAAGATAGAGCATTTTGTTTTCTGATAAAATAC-AAATCTGACATTTCCCTA---TCAATTGT---TTTTGC------ACATGCTTCAAA i dasNov3.JH578441 C 0 I 20 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=119697.000000 s hg38.chrUn_KI270749v1 38997 11 + 158759 ATACAGGTAAA s panTro5.chr1 101865263 11 - 228573443 ATACAGGTAAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494548 11 - 162613886 ATACAGGTAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17196 11 - 126596 ATACAGGTAAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743196 11 + 99891981 ATACAGGTAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440057 11 - 185818997 ATACAGGTAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67269686 11 + 192294377 ATACAGGTAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2751741 11 + 3123512 ATACAGGTAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472041 11 + 10077455 ATACAGGTAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680020 11 + 127223203 ATACAGGTAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124226 11 - 1799296 ATACAGGTAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1722931 11 + 6934359 ATACAGGTAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108080835 11 - 128169293 ATACAGGAAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 702765 11 - 18371965 ATACAGGAAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363279 11 + 3566421 ATACAGGAAAA i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12693879 11 + 14340318 ATACAAGTAAA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51735159 11 - 55844845 GTGCCAGTAAA i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e dasNov3.JH578441 1136386 20 + 1446996 I a score=740705.000000 s hg38.chrUn_KI270749v1 39008 98 + 158759 ATTTA----tttgtgc----ttttt-tgctatttctgttttgctattctctgt-ttGTCTATGTCTTCTCCACATAGACACAATTAGGGAATTT--TGTACACTCTTGTG s panTro5.chr1 101865274 98 - 228573443 ATTTA----TTTGTGC----TTTTT-TGCTATTTCTGTTTTGCTATTCTCTGT-TTGTCTATGTCTTCTCCACATAGACACAATTAGGGAATTT--TGTACAACCTTGGG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494559 94 - 162613886 ATTTA----TTTCTGC----TTTTTCTGCTATTTCTGTTTTGCTAT--TCTGT-TTGTCTATG---TCTCCACATAGCCGCATTTAGGGAATTC--TGTACACTCTCGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17207 98 - 126596 ATTTA----TTTGTGC----TTTTT-TGCTAATTCTGCTTTGCTGTTCTCTGT-TTGTCTATGTCTTCTCCACATAGACACAATTAGGGAATTT--TGTACACTCTTGGG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743207 95 + 99891981 ATTTA----TTTCTGC----TTTTT-TGTTATTTCTGTTTTGGTATTCTCTGT-TTGTCTATG---TCTCCACATAGCCACAGCTAGGGAATTC--TGTACACTCTTGTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440068 104 - 185818997 ATTTATTTGTTTGTGC--TTTTTTT-TGCTATTTCTGCTTTGCTATTCTCTGT-TTGTCTATGTCTTCTCCACATAGCCGCAATTAGGGAATTT--TGTACACTCTAGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67269697 104 + 192294377 ATTTATTTGTTTGTGC--TTTTTTT-TGCTATTTCTGCTTTGCTATTCTCTGT-TTGTCTATGTCTTCTCCACATAGCCGCAATTAGGGAGTTT--TGTACACTCTAGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2751752 105 + 3123512 ATTTATTTGTTTGTGC-TTTTTTTT-TGCTATTTCTGCTTTGCTATTCTCTGT-TTGTCTATGTCTTCTCCACATAGCCGCAATTAGGGAATTT--TGTACACTCTAGTG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472052 104 + 10077455 ATTTATTTGTTTGTGC--TTTTTTT-TGCTATTTCTGCTTTGCTATTCTCTGT-TTGTCTATGTCTTCTCCACATAGCCGCAATTAGGGAATTT--TGTACACTCTAGTG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680031 105 + 127223203 ATTTATTTCTTTGTGC-TTTTTTTT-TTTTGCTATTTTTTTGCTATTCTCTGT-TTGTCTATGTCTTCTCCACATAGCCGCAATTAGGGAATTT--TGTACACTCTAGTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124237 101 - 1799296 ATTTA----TTTGTGC-TTTTTCtt-tgctatttctgctttgctattctctgt-ttgtctatGTCTTCTCCACATAGTCGCAATAAGGGAATTT--TGTACACTCTAGTG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1722942 106 + 6934359 ATTTATTTGTTTGTGCTTTTTTTTT-TGCTATTTCTGCTTTGCCATTCTCTGT-TTGTCTACGTCTTCTCCACATACCCACAATTAGGGAATTT--TGTACACTCTTGTG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108080846 89 - 128169293 ACTTA----TTTGTGC----TTTTT-TGCTGTTTCTGCTTTGCTATTC---------TCTATGTCTTCTCCACACAGCCACAATTAGGGACTTT--TGTATACTGTTGT- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 702776 89 - 18371965 TCTTA----TTTGTGC----TGTTT-TGCTGTTTCTGCTTTGCTATTC---------TCTATGTCTTCTCCACATAGCCATGATTAGGGACTTT--TGTAAACTGTTGT- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363290 92 + 3566421 -CTTA----ATTGTGC----TTTTT-TGCTGTTTCTGCTTTGCTATTCTC-----TGTCTATGTCTTCTCCACATAGCCACAATTAGGGACTTT--TGTAAACTGTTGT- i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12693890 99 + 14340318 AAAAA----TTCATGT-----GTTT-GGCGACATCTGC-CAGCCAGCCGCTTTCTTGTCTGCCTCTTCTCCCCATAGGCAGGCTTAGGGAATTTGGTATACACTTTTGTT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51735170 98 - 55844845 AATCTCTT-TTTGTGC------TCT-GGCTATTTCTGCCCCTCCGTTTTCTGC-TCATTTAT-TCTTTTCCACACAGGCATACTTAAGGAATTT--TGTATACTTTTCTG i canFam3.chr18 C 0 I 888 s dasNov3.JH578441 1136406 87 + 1446996 gtttg----tttgttt----gtttT-GGCTACTTCTGCCCTGCTGGTCTCCTC------------TTCTCTATAAAGACACACTTAAGGATTAT--TTTATGTTTTTATG i dasNov3.JH578441 I 20 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=1739859.000000 s hg38.chrUn_KI270749v1 39106 188 + 158759 --CCAACTGCTTTGA------TAGTAACAAAATGTATTTCTCGAACTCCTAGGTATAAAACTCAAGT-ATCCACAATTTAAATTCTTTTT-TGCTCACTTCTGTTACATTTCCAGTCTCAATAGAAATCG---ATGCCAA-T-CCAGAAATACAAGCATTATTCTAATACTTCTCACACATTACTGATATAGATTAAATTTTC s panTro5.chr1 101865372 188 - 228573443 --CCAACTGCTTTGA------TAGTAACAAAATGTATTTCTCGAACTCCTAGGTATAAAACTCAAGT-ATCCACAATTTAAATTCCTTTT-TGCTCACTTCTATTATGTTTCCAGTCTCAATAGAAATCG---ATGCCAA-T-CCAGAAATACAAGCATTATTCTAATACTTCTCACACATTACAGGTATAGATTAAATTTTC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494653 188 - 162613886 --CCAACTGCTTTGA------TAGTAACAAAATATATTTCTCGAACTCCTAGGTATAAAACTCAAAT-ATCCACAATTTAAATTCTTTTT-CCCTCACTTCTATTATGTTTCCAGTCTCAATAGAAATCA---ATGCCAA-T-CCAGAAATACAAGCATTATTCTAATGCTTCTCACACATTACAGATACAGATTAAATTTTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17305 188 - 126596 --CCAACTGCTTTGA------TAGTAACAAAATGTATTTCTCAAACTCCTAGGTATAAAACTCAAGT-GTCCACAATTTAAATTCTTTTT-TGCTCACTTCTATCATGTTTCCAGTCTCAATAGAAATCG---ATGCCAA-T-CCAGAAATACAAGCATTATTCTAATACTTCTCACACATTACTGATATAGATTAAATTTTC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743302 188 + 99891981 --CCAACTGCTTTGA------TAGTAACAAAATATATTTCTCGAACTCCTAGGTATAAAACTCAAAT-ATCCACAATTTAAATTCTTTTT-CCATCACTTTTATTATCTTTCCAGTCTCAATGGAAATCA---ATGCCAA-T-CCAGAAATACAAGCATTATTCTAATGCTTCTCATGCATTACAGATATAAATTAAACTTTC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440172 188 - 185818997 --TCAACTGCTTTGA------TAGTAACAAAGTATATTTCTCAAACTCCTAGGTATAAAACTCAAAT-ATCCACAATTTAAATTCTTTTT-CCCTCACTTCTATTATGCTTCCAGTCTCAATAGAAATCA---ATGCCTA-T-CCAGAAGTACAAGCATTATTCTAATGCTTCTCACACATTACAGATATAGATTAATATTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67269801 188 + 192294377 --TCAACTGCTTTGA------TAGTAACAAAATATATTTCTCAAACTCCTAGGTATAAAACTCAAAT-ATCCACAATTTAAATTCTTTTT-CCCTCACTTCTATTATGCTTCCAGTCTCAATAGAAATCA---ATGCCTA-T-CCAGAAGTACAAGCATTATTCTAATGCTTCTCACACATTACAGATATAGATTAATATTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2751857 188 + 3123512 --TCAACTGCTTTGA------TAGTAACAAAATATATTTCTCAAACTCCTAGGTATAAAACTCAAAT-ATCCACAATTTAAATTCTTTTT-CCCTCACTTCTATTATGCTTCCAGTCTCAATAGAAATCA---ATGCCTA-T-CCAGAAATACAAGCATTATTCTAATGCTTCTCACACATTACAGATATAGATTAATATTTC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472156 184 + 10077455 --TCAACTGCTTTGA------TAGTAACAAAATATATTTCTCAAACTCCTAGGTATAAAACTCAAAT-ATCCACAATTTATATTCTTTTT-CCCTCACTTCTATTATGCTTCCAGTCTCAATAGAAATCA---ATGCCTA-T-CCAGAAATACAAGCATTATTCTAATGCTTCTCACACATTACAGATATA----AATATTTC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680136 188 + 127223203 --TCAACTTCTTTGA------TAGTAACAAAATATATTTCTCAAACTCCTAGGTATAAAACTCAAAT-ATCCACAATTTAAATTCTTTTT-CCCTCACTTCTATTATGTTTCCAGTCTCAATAGAAATCA---ATGCCAA-T-TCAGAAATACAAGCATTATTGTAATGCTTCTCACACATTACAGATATAGATTAATATTTC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124338 188 - 1799296 --TCAACTGCTTTGA------TAGTAACAAAATATATTTCTCGAACTCCTAGGTATAAAACTCAAAT-ATCCACAATTTAAATTCTTTTT-CCCTCACTTCTATTATGTTTACAGTGTCAATAGAAATCA---ATGCCAA-T-CCAGAAATACAAGCATTATTCTAATGCTTCTCACACATTACAGATATAGATTAATATTTC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1723048 184 + 6934359 --TCAACTGCTTTGA------TAGTAACAAAATATATTTCTCAAACTCCTAGGTATAAAACTCAAAT-ATCCACAATTTAAATTCTTTTT-CCCTCACTTCTATTATGTTTCCAGTCTCAATAGAAATCA---ATGCCAA-T-TCAGAAATA----CATTATTCTAATGCTTCTCACACATTACAGATATAGATTAATATTTC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108080935 176 - 128169293 --CCAACTGCTTTGA------TAGTAACAAAATATATTTCTCACACTCCTACATATAAAACTCAAAT-ATCCACAATTTAAATGATTTTT-CCTTCATTTCCATTATGTTCCCAGTCTCAATAGATATCA---ACGCAAA-T-CCAGAAA------------TCTAATGCTTTTCAAACATTACAGATGTAGATTCAATTATC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 702865 187 - 18371965 --TCAACTGCTTTGA------TAGTAACAAAATATATTTCTCAAACTCCTATGTATAAAACTCAAAT-ACCCACAATTTAAATGATTCTT-CCTTCACTTCTATCATGTTCCCAGTCTCAATAGCTATCA---ATGCTAA-T-CCAGAAACA-AAGCATTATTCTAATGCTTCTCAAACATTACAGATACAGATTCAATTATC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363382 188 + 3566421 --TCAACTGCTTTGA------TAGCAACAAAATATATTTCTCAAACTCCTATGTATAAGACTCAAAT-ATCCACAATTTAAATGATTTTT-CCTTCACTTCCATTATGTTCCCAGTCTCAATAAGCATCA---ATGCTAA-T-CCAGAAGTACGAGCATTATTCTAATGCTTCTCAAACATTACAGATACAGATTCATTTATC i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12693989 197 + 14340318 --TCAGTGGCTTTGACACGCGCATTAACAAAATATATTTCTCAAAATACTATGCTTAAAACTCAAAT-ATAC-CAAATTAAAATTTTTTC-TTTCCTTTCCTTCTATGTTCGTACTATCATAAAACATTATCTATGCCTA-TGCCAGAAAAGCAAGCATTGTTCTAATGCTTCTCAAACATCATAGATGTAAATTCAATTTTC i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1136493 192 + 1446996 TCTCAACTGTATCGA------TAGTAACTATATGTTTTT---GAACTCATATGTTTAAAATGGAAATGACCCAAAATTGAAGACCTTTTTGCCTTCACTTCTATTATATTCTCACTATCAAGAAATATTGCGCTTGCCTAGC-CCAGAAACCTAAGCAGTATTCAAATGCTTCTCCC-CGGCACAGTTACAGATTCAATGTTC i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e canFam3.chr18 51735268 888 - 55844845 I a score=317681.000000 s hg38.chrUn_KI270749v1 39294 34 + 158759 TAGATCTCCTTAAATA--CT----ATCATTTTTCACTACT s panTro5.chr1 101865560 33 - 228573443 TAGATCTCCTTAAATA--CT----ATCATTTT-CACTACT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494841 34 - 162613886 TAGATATCCTTAAATA--CT----ATCATTTTTCACTACT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17493 34 - 126596 TAGATCTCCTTAAATA--CT----ATCATTTTTCACTACT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743490 34 + 99891981 TAGACCTCCTTAAATA--CT----ATGATTTTTCACCACT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440360 34 - 185818997 TAGATCTCCTTAAATA--TT----ATCATTTTTCACTACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67269989 34 + 192294377 TAGATCTCCTTAAATA--TT----ATCATTTTTCACTACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752045 34 + 3123512 TAGATCTCCTTAAATA--TT----ATCATTTTTCACTACT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472340 34 + 10077455 TAGATCTCCTTAAATA--CT----ATCATTTTTCACTACT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680324 34 + 127223203 TAGATCTCCTTAAATA--CT----ATCATTTTCCACTACT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124526 34 - 1799296 TAGATCTCCTTAAATA--CT----ATCATTTTTCACTACT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1723232 34 + 6934359 TAGATCTCCTTAAATA--CT----ATCATTTTTCACTACT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108081111 31 - 128169293 TAGAGCCCCTTAAATA--AT-------ATTTCTTATTGCT i calJac3.chr8 C 0 I 319 s saiBol1.JH378145 703052 31 - 18371965 TAGATCTCCTTAAATA--AT-------ATTTCTTACTGCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363570 31 + 3566421 TAGATCTCCTTAAATA--AT-------ATTTCTTACTGCT i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12694186 38 + 14340318 CAGGTCTCCTTAAAAA--CTCTCTACCATTTCTCACTGCT i otoGar3.GL873564 C 0 I 4 s canFam3.chr18 51736156 38 - 55844845 TACATCTTTTTAAATA--ATATCTATCATTTCTCACTGTT i canFam3.chr18 I 888 C 0 s dasNov3.JH578441 1136685 36 + 1446996 TCAACATCGTTAAATAAGCT----GTCATTCCTCAATGCT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=217558.000000 s hg38.chrUn_KI270749v1 39328 26 + 158759 TGTATCTTAACTGTTAAGTTC-AACAT s panTro5.chr1 101865593 26 - 228573443 TGTATCTTAACTGTTAAGTTC-AGCAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494875 26 - 162613886 TTTATCTTAACTGTTAAGTTC-AACAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17527 26 - 126596 TGTATCTTAACTGTTAAGTTC-AACAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743524 26 + 99891981 TTTATCTTACCTGTTAAGTTC-AACAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440394 26 - 185818997 TTTGTCTTAATTGTTAAGTTC-AACAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67270023 26 + 192294377 TTTATCTTAATTGTTAAGTTC-AACAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752079 26 + 3123512 TTTATCTTAATTGTTAAGTTC-AACAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472374 26 + 10077455 TTTATCTTAATTATTAAGTTC-AACAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680358 26 + 127223203 TTTATCTTAATTATTAAGTTC-AATAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124560 26 - 1799296 TTTATCTTAATTATTAAGTTC-AACAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1723266 26 + 6934359 TTTATCTTAATTGTTAAGTTC-AACAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108081461 26 - 128169293 TTCATCTTAACTGTTAAGTTT-AACAT i calJac3.chr8 I 319 C 0 s saiBol1.JH378145 703083 26 - 18371965 TTTATCTTAACTCTTAAGTTT-AACAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363601 26 + 3566421 TTTATCTTAACTGTTAAGTTT-AACAT i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12694228 19 + 14340318 CTTATCTAAGTTCCTAAAT-------- i otoGar3.GL873564 I 4 C 0 s canFam3.chr18 51736194 20 - 55844845 ------TTGATTTTCAAAAAA-AACTT i canFam3.chr18 C 0 I 7 s dasNov3.JH578441 1136721 23 + 1446996 -TTATCTTATC---CAAGTTCTAAAAT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 996285 1111 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=11422.000000 s hg38.chrUn_KI270749v1 39354 1 + 158759 T s panTro5.chr1 101865619 1 - 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494901 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17553 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743550 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440420 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67270049 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752105 1 + 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472400 1 + 10077455 T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680384 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124586 1 - 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1723292 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108081487 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 703109 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363627 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s tarSyr2.KE946558v1 997396 1 - 1121937 C i tarSyr2.KE946558v1 I 1111 I 161 s otoGar3.GL873564 12694247 1 + 14340318 T i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51736221 1 - 55844845 T i canFam3.chr18 I 7 C 0 s dasNov3.JH578441 1136744 1 + 1446996 C i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=261954.000000 s hg38.chrUn_KI270749v1 39355 23 + 158759 TTCTATA---TTAATATGTTGTGAAA s panTro5.chr1 101865620 26 - 228573443 TTCTATAATATTAATAAGTTGTGAAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494902 26 - 162613886 TTCTGTAATATTAATATATTGTGAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17554 26 - 126596 TTCTGTAATATTAATATATTGTGAAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743551 26 + 99891981 TTCTATAATATTAATATATTGTGAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440421 26 - 185818997 GTCTATAATATTAATATATTGTGAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67270050 26 + 192294377 TTCTATAATATTAATATATTGTGAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752106 26 + 3123512 TTCTATAATATTAATATATTGTGAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472401 26 + 10077455 TTCTATAATATTAATATATTTTGAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680385 26 + 127223203 TTCTATAATTTTAATATATTGTGAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124587 26 - 1799296 TTCTATAATTTTAATATATTGTGAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1723293 26 + 6934359 TTCTATAATATTAATGTATTGTGAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108081488 26 - 128169293 TTCTATAATTCTAATACATTGTGAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 703110 26 - 18371965 TTCTATTATACTAATACATTGTGAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363628 26 + 3566421 TTCTATAATACTAATACATTGTGAAA i cebCap1.NW_016107540v1 C 0 I 14 s otoGar3.GL873564 12694248 26 + 14340318 TTCTGTAATACTAATGTACTGCACAA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51736222 26 - 55844845 TTCTATAATACTAATATTTCACAAAA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1136745 25 + 1446996 TTCTATAATATTCATTTGTTGCAAA- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 997397 161 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=237493.000000 s hg38.chrUn_KI270749v1 39378 39 + 158759 ATGTCCTTACTTT-CTTATTTTTCCCAGGTTCAATATTTT s panTro5.chr1 101865646 39 - 228573443 ATTTCCTTACTTT-CTTATATGTCCCAAGTTCAAGGTTTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494928 39 - 162613886 ATGTCCTTACTTT-CTTATTTGTCCCAGGTTAAATGTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17580 39 - 126596 ATTTCCTTACTTT-CTTATTTGTCCCAGGTTCAATATTTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743577 39 + 99891981 ATGTCCTTACTTT-CTTATTTGTCCCAGGCTAAATATTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440447 39 - 185818997 ATTTCCTTACTTT-CTTATTTGTCCCAGGTTAAATGTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67270076 39 + 192294377 ATTTCCTTACTTT-CTTATTTGTCCCAGGTTAAATGTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752132 39 + 3123512 ATTTCCTTACTTT-CTTATTTGTCCCAGGTTAAATGTTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472427 39 + 10077455 ATTTCCTTACTTT-CTTATTTGTCCCAGATTAAATGTTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680411 39 + 127223203 ATTTCCTTACTCT-CTTATTTGTCCCAGGTTAACTGTTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124613 39 - 1799296 ATTTCCTTACTTT-CTTATTTGTCCCAGGTTAAATGTTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1723319 39 + 6934359 ATTTCCTTACTTT-CTTATTTGTCCCAGGTTAAATGTTTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108081514 13 - 128169293 ---------------------------CGTTAAATGTTTT i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 703136 13 - 18371965 ---------------------------AGTTAAATGTTTT i saiBol1.JH378145 C 0 I 1 s otoGar3.GL873564 12694274 40 + 14340318 TTTTTCTTATTTTGCTTTCTTTTCCCAGTTTAATTTCCTT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51736248 30 - 55844845 ---------TTTT-CTAGTGTTGCTAGAATTTAATTTTTT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1136770 40 + 1446996 GTTTCCTCACTTTACTTCTTTGCCCCAGTTTAGTTTCCTT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 997397 161 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e cebCap1.NW_016107540v1 1363654 14 + 3566421 I a score=887444.000000 s hg38.chrUn_KI270749v1 39417 91 + 158759 ACAGTCTCTACCTCACCCTGTGAAGCATAAACATTGTAC-ATGCTGTACAAATAATACATCGTTCATGTACTTAGAGATTGCACGATTTTTA s panTro5.chr1 101865685 92 - 228573443 GCAGTCTCTACCTCACCCTGTGAAGCATAAACATTGTACTATGCTGTACAAATATTACATAGTTCATGTGCTTAGAGATTACACAATTTTTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108494967 91 - 162613886 GCAGTCCCTACCTCACCCTGTGAAGCATTAACATTGTAC-ATGTTGTACAAATAATACATAGTTCATTTGCTTAGAGATTGCACAATTTTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17619 91 - 126596 GCAATCTCTACCTCACCCTGTGAAGCATGAACATTGTAC-ATGCTGTACAAATAATACATCGTTCATGTACTTACAGATTGCACAATTTTTA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743616 91 + 99891981 GCAGTCTCTACCTCACCCTGTGAAGCATAAACATTGTAC-ATGCTGTACAAATAATACATAGTTCATGTGCTTAGAGATTGCACAATTTTTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440486 91 - 185818997 GCAGTCTCTACCTTACCCTGTGAAGCATAAATATTGTAC-ATACTGTACAAATAATACAAAGTTCATGTGCTTAGAGACTGTGCAATTTCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67270115 91 + 192294377 GCAGTCTCTACCTTACCCTGTGAAGCATAAATATTGTAC-ATACTGTACAAATAATACAAAGTTCATGTGCTTAGAGACTGTGCAATTTCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752171 91 + 3123512 GCAGTCTCTACCTTACCTTGTGAAGCATAAATATTGTAC-ATACTGTACAAATAATACAAAGTTCATGTGCTTAGAGACTGTGCAATTTCTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472466 91 + 10077455 GCAGTCTCTACCTTACCCTGTGAAACATAAATATTGTAC-ATACTGTACAAATAATACATAGTTCATGTGCTTAGAGACTGTGCAATTTCTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680450 91 + 127223203 GCAGTCCCTACCTTACCCTGTGAAGCATAAATATTGTAC-ATACTGTACAGATAATACAGAGTTCATGTGCTTGGAGACTGTGCAATTTCTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124652 91 - 1799296 GCAGTCTCTACCTTACCCTGTGAAGCATAAATATGGTAC-ATACTGTACAAATAATACAGAGTTCATGTGCTTAGAGACTGTGCAATTTCTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1723358 91 + 6934359 GCAGTCTCTACCTCACCCTGTGAAGCATAAATATTGTAC-ATACTGTACACATAATACAGAGTTCATGTGCTTAGAGACTGTGCAATTTCTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108081528 91 - 128169293 GCAGTCTCTGCCTCACCCATGGAAGCATGAACATTGTAT-ATGCTGTACAAATAATACATAGTTCATGGGTTTAGAGATTGTGCAGTTTTTA i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 703150 91 - 18371965 GCAGTCTGTGCCTCGCCTTGCAAATCATAAACATTGTAT-ATGCTGTACCAATAATACATAGTTCATGGATTTAGAGACTGTGCAATTTTTA i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1363668 91 + 3566421 GCAGTCTCTGCCTCACCCTGCGAAGCATAAACATTGTAT-ATGCTCTACAAATAATACATAGTTCATGGGGTTAGAGACTGTGCAATTTTTA i cebCap1.NW_016107540v1 I 14 C 0 s otoGar3.GL873564 12694314 89 + 14340318 GTGGCCTCTTTCTCACATTGTGAGTTATAAACACTGGAT-TTGCTGTGCAAATAAGACA--ACTCATGTGTTCACTGATCTCACAATTATTG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51736278 83 - 55844845 GCAGCCT----CTCATCCTGCTAAGCATAAACATTGGAT-ATGCTGTGGAAG----ACAGAATTTATGTGCTCATAGATCATGCAATTATTG i canFam3.chr18 C 0 I 7 s dasNov3.JH578441 1136810 89 + 1446996 GCAGTATTT--CTCACTCTGTGAAGCATAAACATTGGTT-ATGCTCTGTAAACAAGATGTAGTTTATATGCTCTTAAATCATGCAATTATTG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 997397 161 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=11849.000000 s hg38.chrUn_KI270749v1 39508 1 + 158759 T s panTro5.chr1 101865777 1 - 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr7 108495058 1 - 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17710 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743707 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440577 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67270206 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752262 1 + 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472557 1 + 10077455 T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680541 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124743 1 - 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1723449 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108081619 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 703241 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363759 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s tarSyr2.KE946558v1 997558 1 - 1121937 T i tarSyr2.KE946558v1 I 161 I 747 s otoGar3.GL873564 12694403 1 + 14340318 T i otoGar3.GL873564 C 0 I 5 s dasNov3.JH578441 1136899 1 + 1446996 T i dasNov3.JH578441 C 0 I 6 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e canFam3.chr18 51736361 7 - 55844845 I a score=578136.000000 s hg38.chrUn_KI270749v1 39509 55 + 158759 TTGGTTGACAATAGCTAATG-TTTTCTTCTTCATTTTCTATTTCCTGATTTTTCTT s panTro5.chr1 101865778 55 - 228573443 TTGGTTGACAATAGCTAAAG-TTTTCTTCTTCATTTTCTATTTCCTGATTTTTCTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108495059 55 - 162613886 TTGGTTGACAATAGCTAGTG-TTTTCTTCTTCATTTTCTATTTCCTGATTTTTCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17711 55 - 126596 TTGGTTGATGATAGCTAATG-TTTTCTTCTTCATTTTCTATTTCCTGATTTTTCTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743708 55 + 99891981 TTGGTTGACAATAGCTAATG-TTTTCTTCTTCATTTTCTATTTCCTGATTTTTCTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440578 55 - 185818997 TTGGTTGACAATAGCTAATG-TTTTCTTCTTCATTTTCTATTTCCTGATTTTTCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67270207 55 + 192294377 TTGGTTGACAATAGCTAATG-TTTTCTTCTTCATTTTCTATTTCCTGATTTTTCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752263 55 + 3123512 TTGGTTGACAATAGCTAATG-TTTTCTTCTTCATTTTCTATTTCCTGATTTTTCTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472558 55 + 10077455 TTGGTTGACAATAGCTAATG-CTTTCTTCTTCATTTTCTATTTCCTGATTTTTCTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680542 55 + 127223203 TTGGTTGACAATAACTAATG-TTTTCTTCTTCATTTTCTATTTCCTGATTTTTCTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124744 55 - 1799296 TTGGTTGACAATAGCTAATG-Ttttcttcttcaatttctatttcctgatttttctt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1723450 55 + 6934359 TTGGTTGACAATAGCTAATG-TTTTCTTCTTCGTTTTCTATTTCCTGATTTTTCTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108081620 56 - 128169293 TTGGTTGGCAATAGCTAATGTTTTTCTTCTTTATGTTTTATTTTCTGATTTTTCTT i calJac3.chr8 C 0 I 553 s saiBol1.JH378145 703242 56 - 18371965 TTGGTTGATAATCGCTAATGTTTTTCTTCTTCATGTTTTATTTTCTGATTTTTCTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363760 52 + 3566421 TTGGTTGAAAA----TAATGTTTTTCTTCTTCATTTTTTATTTTCTGATTTTTCTT i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12694409 43 + 14340318 CTGG------------ACTG-TGTTATTCTTTGTTTTCTATGTTCTGACTTTCCtt i otoGar3.GL873564 I 5 C 0 s canFam3.chr18 51736368 56 - 55844845 TTGGTTGACAGTAGCTAATATTTTTCTTCTTCATTTTCTATATTCTAATTTCTCTT i canFam3.chr18 I 7 C 0 s dasNov3.JH578441 1136906 48 + 1446996 TTGTTTGACA---GATAATG-CTT--TTCTTCATTTTCTATT--CTAATTTTCATT i dasNov3.JH578441 I 6 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 997559 747 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=225917.000000 s hg38.chrUn_KI270749v1 39564 26 + 158759 TATTTAGTATATACTACAT-TATCATA s panTro5.chr1 101865833 26 - 228573443 TATTTAGTATATGCTACAT-TATCATA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108495114 26 - 162613886 TATTTAGTATATAATACAT-TATCGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17766 26 - 126596 TATTTAGTATATACTACCT-TGTCATA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743763 26 + 99891981 TATTTAGTATATAATACAT-TATCATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440633 26 - 185818997 TATTTTGTATATAATACAT-TATCATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67270262 26 + 192294377 TATTTTGTATATAATACAT-TATCATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752318 26 + 3123512 TATTTTGTATATAATACAT-TATCATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472613 26 + 10077455 TATTTTGCATATAATACAT-TATCATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680597 26 + 127223203 TATTTTGCATATAATACAT-TATCATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124799 26 - 1799296 tattttgtatATAATACAT-TATCATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1723505 26 + 6934359 TATTTTGTATATAATACAT-TATCATA i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 703298 26 - 18371965 TGTTTAGTATATAATAAGT-TATTATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363812 26 + 3566421 TGTTTAGTATATAATACAT-TATTATA i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12694452 26 + 14340318 tatttaatatgtaattaat-taatata i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51736424 27 - 55844845 TATTTGGCATATAATACATCTATTATA i canFam3.chr18 C 0 I 1 s dasNov3.JH578441 1136954 27 + 1446996 TCTTTAACATATCCTATTTTTATCATA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 997559 747 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e calJac3.chr8 108081676 553 - 128169293 I a score=5364085.000000 s hg38.chrUn_KI270749v1 39590 557 + 158759 AAAATAAGAACGTTTTACAAACTAAAGC--AAAAGCAACCCTAGGAATAAAATGCACAAATAAAATATATAAACATACATTTAGATGTACCACGTACCCTTGTAATTTATTTAGACAATTAATTCTAG-TACAATTTTAATTA--GTCTGTGTATTATCTGTCATC--G-TCTTAGTA-TTTTTTATATAACAAATTTTGTAAATCAAAAAGTCTCAATGTTGTTATAAACTATCTTGGCAGAGGTTGATCTCCAAGGAATAATTTCTCTCCCAAATTATGCCAATCAGA--ATTTCACTCTACCATAATTCTTTTAATCAGTTTCAGAGGAATAATAAATTTCAAAATTGTTCAAGGTACT---TCTTT-TAGTTCAAG-TACCTTTTGACAGGTGTAAAACTGTAGACAGACTGATACAAACATATTCTAATTGACTC-AAAATTATATG-GGACCTATTTTAAAATCTAGATTTTAAAATGTCGTGTCAACATACACATGGTTTCCTTGTGAAATAATTGCTTTTTATTCTCTGGATAGAA-----TAATTTAATCTTTAAACATTCAATTCTCTGT s panTro5.chr1 101865859 559 - 228573443 AAAATGAGAACGTTTTACAAACTAAAGC--AAAAGAAACCCTAGGAAAAAAATGCACAAATAAAATATGAAAACATACATTTAGATGTACCATGTACACTTCTAATTTATTTAGACTTTTAATTGTAG-TACAATTTTAATTAAAGTCTGTGTATTATCTGCCATC--G-TCTTAGTA-TTTTTTATATAACAAATTGTGTAAATTAAAAAGCCTCAATGTCATTATAAACTATCTTGGCAGAGGTTGATGTCCAAGGAATAATTTCTCTCCCAAATTATGTCAATCAGA--ATTTCACTCTACCATAATTCTTTTAATCAGTTTCAGAGGAATCATAAATTTCAAAACTGTTCAAGGTAGT---TGTTG-TAGTTCAAG-TACATTTAGACAGGTGTAAAACTGTAGACAGACTGATCCAAACATATTCTAATTGACAC-AAAAGTATATG-GGACCTATTTTAAAATCTAGATTTTAAAATGTCGTGTCAACGTACACATGTTCTCCTTGTGAAATAATTGCTTTTTATTCTCTGGATAGTA-----TAATTTAATCTTTAAACCTTCAATTCACTGT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108495140 548 - 162613886 AAAATAAGAACGTTTTACAAACTAAAGC--AAAAACAACCCTAGGAATAAAATGCACAAATAAAATATATAAACATTCAATTAGATGTACCACGTACCCTTCTAATTTATTTAGACATTTAATTTTAG-TACAATCTTAATTAAAGTCTGTGTATTATCTGTCATC--A-TCTGAGTA-TTTTTTATATAGCAAATTTTGTAAATCAAAAAGTCTGAATGTCTTTATAAACTATCTTGGCAGGGGTTGATCTCCAAGGAATAATTCCTCTCCCAAATTATGCCAATCAGA--ATTTCACTATACCATAATTCTTTTAATCAGTTTCAGAGGAATAATAAATTTCAAAATTGTTCAAGGTA------CTTG-TAGTTCAAG-TACATTTTGACAGGTTTAAAACTGTAGACAGACTGATACAAACATATTCTAATTGACTC-AAAAATATATG-GGACCTATTTTAAAATCTATATTTTAAAATGTCGTGTCAACATATACATGTTCTCCTTGTGAAATAATTGCTTTTTATTCTCTGGATAG-------------AATCTTTAAACCTTCAATTCACTGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 17792 559 - 126596 AAAATAAGAACGTTTTACAAACTAAAGC--AAAAGCAACCCTAGGAATAAAATGCACAAATAAAATATATAAACATGCAATTAGATGTACCACGTACCCTTGTAATATATTTAGACCTTTAATTTTAG-TACAATTTTAATTAAAGCCTGTGTATTATCTGTCATC--A-TCTTAGTA-TTTTTTATATAACAAATTGTGTAAATCAAAAAGTCTCAATGTCATTATAAACTGTCTTGGCAGAGGTTGATCTCCAAGGAATAATTTCTCTCCCAAATTATACCAATCAGA--ATTTCACTCTACCATAATTCTTTTAATCAGTTTCAGAGGAACAATAAATTTCAAAATTGTTCAAGGTACT---TCTTT-TAGTTCAAG-TACCTTTTGACAGGTGTAAAACTGTAGACAGACTGATACAAACATATTCTAATTGACTC-AAAATTATGTG-GGACCTATTTTAAAATCTAGATTTTAAAATGTCTTGTCAACATACACATGTTCTCCTTGTGAAATAATTGCTTTTTATTCTCTGGATAGAA-----TAATTTAATCTTTAAACCTTCAATTCACTGT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55743789 556 + 99891981 AAAATAAGAACGTTTTACAAACTAAAGC--AAAAACAACCCTAGGAATAAAATGCACAAATAAAATATATAAACATACAATTAGATGTACCACGTACCCTTCTAATTTATTTAGACATTTAATTTTAG-TACAATTTTAATTAAAGTCTGTGCGTTATCTGTCATC--G-TCTTAGTA-TTTTTTATATAACAAATTTTATAAATTAAAAAGTCTCAATGTCATTATAAACTATGTTGGCAGGGGATGATCTCCAAGGAATAATTCCTCTCCCAAATTATGCCAATCAGA--ATTTCACTATATCATAATTCTTTTAATCAGTTTCAGAGGAATAATACATTTCAAAATTGTTCAAGGTA------CTTG-TAGTTCAAG-TACATTTTGACAGGTTTAAAACTGTAGACAGTCTGATACAAACATATTCTAATTGACTT-AAAAATATATG-GGACCTATTTTAAAATCTAGATTTTAAAATGTCCTGTCAACATATACATGTTCTCCTTGTGAAATAATTGCTTTTTATTCTCTGGATAGAA-----TAATTTAATCTTTAAACCTTCAATTCACTGT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133440659 553 - 185818997 AAAATAAGAACGTCTTACAAACTAAAGC--AAAAACAACCCTAGGAATAAAATGCACAAATAAAATATACAAATATACAATTAGATGTACCACATACCCTTCTAATTTATTTAGACATTTAATTTTAG-TACAATTTTAA----AGTCTGTGTATTATCTATCATC--T-TCTTAGTA--TTTTTATATAACAAATTTTGTAAATCAAAAAGTCTCCATGTCATTATAAATTATCTTGGCAGGTGTTGATCTCCAAGGAATAATTCCTCTCCCAAATTATGCCAATCAGA--ATTTCACTATACCATAATTCTTTTAATCAGTTTCAGATGAATAATAAATTTCAAAATTGTTCAAGGTACT---TGTTG-TAGTTCAAG-TACATTTTTACAGGTGTAAAACTGTAGACAGATTGATACAAACATATTCTAATTGACTC-AAAAATATATA-TGATCTATTTTAAAATCTAGATTTTAAAAGGTCATGTCAACATATACATGTGCTCCTTGTGAAATAATTGCTTTTTATTCTCTGGATAGAA-----TAATTTAATCTTTAAACCTTC-ATTCACTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67270288 554 + 192294377 AAAATAAGAACGTCTTACAAACTAAAGC--AAAAACAACCCTAGGAATAAAATGCACAAATAAAATATACAAATATACAATTAGATGTACCACATACCCTTCTAATCTATTTAGACATTTAATTTTAG-TACAATTTTAA----AGTCTGTGTATTATCTATCATC--T-TCTTAGTA--TTTTTATATAACAAATTTTGTAAATCAAAAAGTCTCCATGTCATTATAAATTATCTTGGCAGGTGTTGATCTCCAAGGAATAATTCCTCTCCCAAATTATGCCAATCAGA--ATTTCACTATACCATAATTCTTTTAATCAGTTTCAGATGAATAATAAATTTCAAAATTGTTCAAGGTACT---TGTTG-TAGTTCAAG-TACATTTTTACAGGTGTAAAACTGTAGACAGATTGATACAAACATATTCTAATTGACTC-AAAAATATATA-TGATCTATTTTAAAATCTAGATTTTAAAAGGTCATGTCAACATATACATGTGCTCCTTGTGAAATAATTGCTTTTTATTCTCTGGATAGAA-----TAATTTAATCTTTAAACCTTCAATTCACTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752344 554 + 3123512 AAAATAAGAACGTCTTACAAACTAAAGC--AAAAACAACCCTAGGAATAAAATGCACAAATAAAATATACAAATATACAATTAGATGTACCACATACCCTTCTAATTTATTTAGACATTTAATTTTAG-TACAATTTTAA----AGTCTGTGTATTATCTATCATC--T-TCTTAGTA--TTTTTATATAACAAATTTTGTAAATCAAAAAGTCTCCATGTCATTATAAATTATCTTGGCAGGTGTTGATCTCCAAGGAATAATTCCTCTCCCAAATTATGCCAATCAGA--ATTTCACTATACCATAATTCTTTTAATCAGTTTCAGATGAATAATAAATTTCAAAATTGTTCAAGGTACT---TGTTG-TAGTTCAAG-TACATTTTTACAGGTGTAAAACTGTAGACAGATTGATACAAACATATCCTAATTGACTC-AAAAATATATA-TGATCTATTTTAAAATCTAGATTTTAAAAGGTCATGTCAACATATACATGTGCTCCTTGTGAAATAATTGCTTTTTATTCTCTGGATAGAA-----TAATTTAATCTTTAAACCTTCAATTCACTGT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2472639 532 + 10077455 AAAATAAGAATGTCTTACAAACTAAAGC--AAAAACAACCCTAGGAATAAAATGCACAAATAAAATATATAAATATACAATTAGATGTACCCC--ACCCTTCTAATTTATTTAGACATTTAATTTTAG-TACAATTTTAA----AGTCTGTGTATTATCTATCATC--T-TCTTAGTA--TTTTTATATAACAAATTTTGTAAATCAAAAAGTCTCAATGTCATTATAAATTAT-------------------CAACGAATAATTCCTCTCCCAAATTATGCCAATCAGA--ATTTCACTATACCATAATTATTTTAATCAGTTTCAGATGAATAATAAATTTCAAAATTGTTCAAGGTACT---TGTTG-TAGTTCAAG-TACAGTTTTACAGGTGTAAAACTGTAGACAGATTGATACAAACATATTCTAATTGACTC-AAAAATACATA-GGATCTATTTTAAAATCTAGA-TTTAAAAGGTCATGTCAACATATACATGTGCTCCTTGTGAAATAATTGCTTTTTATTCTCTGGATAGAA-----TAATTTAATCTTTAAACCTTCAATTCACTGT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5680623 545 + 127223203 AAAATAAGACCGTCTTACAAACTAAAGC--AAAAACAACCCTAGGAATAAAATGCACAAATAAAATATATAAATATACAATTAGATGTACC----ACCCTTCTAATTTATTTAGACATTTAATTTTAG-TACAATTTTAA----AGTCTGTGTATTATCTATCATC--T-TCTTAGTA--TTTTTATATAACAAATTTTGTAAATCAAAAAGTCTCAATGTCATTATAAATTATCTTGGCAGGGGTTGATTTCCAAGGAATAATTCCTCTCCCAAATTGTGCCAATCAGA--ATTTCACTATACCATAATTCTTTTAATCAGTTTCAGATGAATAATAAATTTCAGAATTGTTCAAGGTACT---TGTTG-TAGTTCAAG-TACATTTTCACAGGTGTAAAACTGTAGACAGATTGATACAAACATATTCTAATTGACTC-AAAAATATATA-GGATCTATTTTAAAATCTAGATTTTAAAAGGTCATGTCAACATATACATGTGCTCCTTGTGAAATAATGGCTTTTTATTCTCTGGATAGAA----------TAATCTTTAAACCTTCAATTCACTGT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1124825 549 - 1799296 AAAATAAGAACGTCTTACAAACTAAAGC--AAAAACAACCCTAGGAATAAAATGCACAAATAAAATATATAAATATACAATTAGATGTACC----ACCCTTCTAATTTATTTAG-CATTTAATTTTAG-TACAATTTTAA----AGTCTGTATATTATCTATCATC--T-TCTTAGTA--TTTTTATATAACAAATTTTATAAATCAAAAAGTCTCAATGTCATTATAAATTATCTTGGCAGGGGTTGATCTCCAAGGAATAATTCCTCTCCCAAATTATGCCAATCAGA--ATTTCACTATATCATAATTCTTTTAATCCATTTCAGATGAATAATAAATTGCAAAATTGTTCAAGGTACT---TGTTG-TAGTTCAAG-TACATTTTTACCGGTGTAAAACTGTAGACAGATTGATACAAACATATTCTAATTGACTC-AAAAATATATA-GGATCTATTTTAAAATCTAGATTTTAAAAGGTCATGTCAACATATACATGTGCTCCTTGTGAAATAATTGCTTTTTATTCTCTGGATAGAA-----TAATTTAATCTTTAAACCTTCAATTCACTGT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1723531 555 + 6934359 AAAATAAGAACATCTTACAAACTGAAGC--AAAAACAACCCTAGGAATAAAATGCACAGATAAAATATATAAATATACAATTAGATGAACCACGTACCCTTCTAATTTATTTTGACATTTAATTTTGG-TACAATTTTAA----AGCCTGTGTATTATCTATCATC--T-TCTTAGTA--TTTTTATATAACAAATTTTGTAAATCAAAATGTCTCAATGTCATTATAAATTATCTTGGCAAGGGTTGATCTCCAAGGAATAATTCCTCTCCCAAATTATGCCAATCAGA--ATTTCACTATACCATAATTCTTTTAATCAGTTTCAGATGAATAATAAATTTCAAAATTGTTCACGGTACT---TGTTG-TAGTTCAAG-TACAGTTTTACAAGTGTAAAACTGTAGACAGATTTATGCAAACGTATTCTAATTCACTCAAAAAAAAAATA-AGATCTATTTTAAAATCTAGATTTTAAAAGGTCATGTCAACATATACATGTGCTCCTAGTGAAATAATTGCTTTTTATTCTCTGGATAGAA-----TAATTTAATTTTTAAACCTTCAATTCACTGT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108082229 548 - 128169293 aAAGTAAGAACGTTTTAAACACCAAAGC---AAAAAACACCTAGGAATAAAAC--ACAAATAAAATATACAAACATACAATTAGGTGTACCACGTACCCTTCTAATTTATTTAGACATTTAATTTTAG-AACAATTTTAAGTAAAGTCTGTGTATTATCTATTATC--CTTCTTAGta-atttttatataaaaaa--ttataaatCAAAAAGTCTCAATGTCATTATAAACTATCTTGGCAGGGGTTGACCTCTAAGGAATAATCTCTCTCCCAAATTAGGCCAATCAGA--ATTTCACTATAACATAATTCTTTCAATCAGTTTCAAAGGAATAATAAATTTCAAAATTGTTCAAGTTACT---TGTTTATAGTTCAAG-TACATTTTGACAGGTGTAAAACTGTAGACAGACTGATAGAAACATATTGAAATTGACCC-AAAAATATATG-GGATCTATTTAAAGATCTACAT--------GCCATGTCAACATATACAGGTGCTCCTTGTGACATAATTGCTTTTTATTCTCTGTATATAA-----TAATTTGATTTTTAAACCTTTAATTCGCTGA i calJac3.chr8 I 553 C 0 s saiBol1.JH378145 703324 550 - 18371965 AAAGTAAGAACGTTTTAAAAACCAAAGCA-AAAAAAAAATCTAGGAATAAAAT--ACAACTAAAATATACAAATATACAATTAGGTGTACCACATACCCTTGTAATTTATTTATACATTTAATTTTAG-GACAATTTTAAGTAAAATAGAGGTATTATCGATTATC--TTTCTTAGTA-ATTTTTATATAACAGATTTTGTAAATCTAAAAGTCTCAATGTCATTATAAACTATCTTGGCAGGTGTTTATCTCCAAGGAATGATTTCTCTCTCAACTTATGCCAATCAGA--ATTTCACTACACCATAAGTCTTTCAATCAGTTTCAGAGAAATCATAAATTTCAAAATTGTTCAAGGTACT---TGTTGATAGTTCAAG-TACATTTTGACAGGTGTAAAACTGTAGACAGACTGGTACAAATATGTTGAAATTGACTC-AAAAACATATG-GGATCTATTTAAAAATCGACAT--------GTCATGTCAACATATACATGTGCTCCTTGTGAAATAATTGCTTTTTATTGTT--TATAGAA-----TAATTTAATCTTTAAATCTTCAATTCATTGT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1363838 547 + 3566421 AAAGTAAGAATGTTTTAAAAACCAAAGC--AAAAAAACACCTAGGAATAAAAT--ACAAATAAAATATACAAATATATAATTAGGTGTACCACGTACCCTTCTAATTTATTTAGACATTTAATTTTAG-AACAATTTTAAGTAAAGTATGTGTATTACCTATTA------TCTTAGTG-TTTTTTATACAACAAATTTTGTAAATCAAAAAGTCTCAATGTCATTATAAACTATCTTGGCAGGGGTTTATCTCCAAGGAATAATTTCTCTCCCAAATTATGCCAATCAGA--ATTTCACTATACCATAAGTCTTTCAATCAGTTTCAGAGAAATAATAAATTTCAAAATTGTTCAAGGTAAT---TGTTTATAGTTCAAG-TACATTTTGACAGGTGTAAAACTGTAGACAGACTGATACAAATGTGTTGAAATTGAGTC-AAAAATATATG-GGATCTATTTAAAAATCTACAT--------GTCATGTCAACATATACATGTGCTCCTTGTGAAATAATTGCTTTTTATTCTCTTTATAGAA-----TAATTTAATGTTTAAACCTTCAATTCACTGT i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12694478 542 + 14340318 caaataaaaaCTTTCCACAAATTAAAGCAGAAAAGCACACCTAAGAAAAAAATGCACAAATAAAATGTACAAATATACAATTAGATGTACACCATCTCTATCTGATTTATATAGATACCTACCTTTAG-AACCTTTCTAATTAAAATATATCTACATTCAA---------TCTTAGTT--TTTTTATGTTATCAATTTTGTAGATTAACTTGTTTCTGTATCATTATAAATTATCTTGGCTGGAGTTGATCTCTGAGGAATTATTCCTGTCCCAAATTATGCCAATCAGAATATTTCATTATACTATAGTGCTTGCTATCAGTCTAAGAGGAATAATAAATTTCAAAATTCTTTAAGGTACC---CATTTTTAGTTAAAG-CACATTTTGACAGGTGTAAAAATGTAGACAGACTAA--AAAGCTTACTTTAATTGGTTC-AAAACTATATG-GCATT--TTTAAAAGTCTACAT------ATATCTTGTCAACACGCACATTTGTTCCTTGTGAAATGATTGCTTTTTATTCTCT-----GAA-----TAATTTAATCTTCAAACCTTCCATTCTCTGT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51736452 545 - 55844845 AAAGCAACATACTTTCATAAACAAAAGA--AAAAAATCACCTAGACTTAAAATGCATCAATAAAATACACAATTA---------AGGCACAACATTCCTATTCAATTTTTTTAGACACCTATGTTTAGTTACATTTTTAGTTAAAA--AATATTTTATCTATTAAT----TCTTAATG-CTCTTTTTCTCAAAAATGTTTTATATTCAAAAGTTTCTATGTCACTGTAAACTATCTTGGCAGGGCTTGAACTCTGGGGAATTATTCCTGTCCTAAACTGTGTCATTCAGAATATTTCACCATCCCATAATTCTTTCAATCAGTGTCAGGGGAATAATAAATTTCAAAATTGTTTAAGGCACT---TATTTCTAGTTCAAG-CACA-TTTGACAGTTATAAAACTGCAGACAGACT--TTAAAAAACATTTTAATTGACTC-AAAAATATATATGGAACTTTAAAAATATCTACAT--------ACCTTGTCAACCTATACCTCTTTTGCTTGTGAAATAATTGCTTTTTATTCTTTAAATAGAAGAAGTTAGGTTAATCTTC-CACCTTCAGTTCTCTTT i canFam3.chr18 I 1 I 116 s dasNov3.JH578441 1136981 539 + 1446996 -AAATAATAAGATTTTGTAAACTAAGGC--AAAAAA----CTAGGAATATAATGCACCG----AATGTACAAATATATGATGAGCTATAGAACATAATGTTCCAGT-----TAAACATCT--TTTTTG-TACATTTGTAACTA-AAAATAGATATTATCTATCATTATT-TCTTAGTGATCCTTTATTTCATAAATTTTGTGCATTGGAACTTCTCTATGTCATTGTAAACTATCTTGGCAAAGGTCAATCTCTAAAGAATTATTCCTTTCCCAAACAATGGCGATCAGAATATTTTATCATACTATAATTCTTTCCAACACTCT--GACGAATAATGAATTTCAAAATTATTTAATATAATCTCTTCTT-TAGTTTAATCCACATTTTGGTAAGTGTGAACATGTGGACAGACTTAAAAAAATGTGTTTTAATTAACA--AAAAATATCTG-GAG------TTAAAAT---AACTGGTATATACTTTGTCAGCATATGTATTTGTCCCTTGTGAAATAATTGTATTCTGATCCCTGAATAAAT-----TATTTTAATCTTTCAACCTTCAATTCTTTAT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 997559 747 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=67211.000000 s hg38.chrUn_KI270749v1 40147 9 + 158759 TAGAAACAA s panTro5.chr1 101866418 9 - 228573443 TAAAAACAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108495688 9 - 162613886 TAAAAACAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 18351 9 - 126596 TACAAACAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744345 9 + 99891981 TAAAAACAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133441212 9 - 185818997 TAAAAAGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67270842 9 + 192294377 TAAAAAGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752898 9 + 3123512 TAAAAAGAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2473171 9 + 10077455 TAAAAAGAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5681168 9 + 127223203 TAAAAAGAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1125374 9 - 1799296 TAAAAAGAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1724086 9 + 6934359 TAAAAAGAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108082777 9 - 128169293 TAAAAATAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 703874 9 - 18371965 CAAAAGTAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1364385 9 + 3566421 CAAAAATAA i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12695020 6 + 14340318 CATAAA--- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51737113 9 - 55844845 tgggaacaa i canFam3.chr18 I 116 I 140 s dasNov3.JH578441 1137520 9 + 1446996 CATAAGTAA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 997559 747 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=510961.000000 s hg38.chrUn_KI270749v1 40156 62 + 158759 ---AATATTACATAAGGAT-ATGCTTATAAAAATAATTCCCAACTAGCTTTTCAGTTCAGAAATAT s panTro5.chr1 101866427 61 - 228573443 ---AATATTACATAAGGAT-ATGCTTATAAAA-TAATTCACAACTAGCTTTTCAATTCAGAAATAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108495697 62 - 162613886 ---AACATTACATAAGGAT-ATGCTTATAAAAATAATTCGCAACTAGCTTTTCAATTCAGAAATAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 18360 62 - 126596 ---AATATTACATAACGGT-AGGCTTATAAATGTAATTCCCAACTAGCTTTTCAACTCAGAAATAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744354 62 + 99891981 ---AATATTACATAAGGAT-ATGCTTATAAAAATAATTCACAGCTAGCTTTTCAATTCAGAAATAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133441221 55 - 185818997 ---AATATTACATAAGGAT-ATGCTTATAAACATAATTCACAACTAGTTTTTCAATTCA------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67270851 55 + 192294377 ---AATATTACATAAGGAT-ATGCTTATAAACATAATTCACAACTAGTTTTTCAATTCA------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2752907 55 + 3123512 ---AATATTACATAAGGAT-ATGCTTATAAACATAATTCACAACTAGTTTTTCAATTCA------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2473180 62 + 10077455 ---AATATTACATAAGGAT-ATGCTTATAAACATAATTCACAACTAGTTTTTCAATTCAGAAATGT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5681177 62 + 127223203 ---AATATTACATAAGGAT-ATGCTTATAAACATAATTCACAACTAGTTTTTCAATTCAGAAATGT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1125383 62 - 1799296 ---AATATTACCTAAGGAT-ACGCTTATAAACATAATTCACAACTAGTTTTTCCATTCAGAAATGT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1724095 62 + 6934359 ---AATGTTATATAAGGAT-ATGCTTATAAACATAATTCACAACTAGTTTTTCAATTCAGAAATGT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108082786 61 - 128169293 ---AATATTACATAAGGAT-ATGTTTATAAA-ATAATTCATGATTAGTTTTTCAATTCAGGAATGT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 703883 57 - 18371965 ---AATATTGCATAAGGAT-ATGCTTATAAA-ATAATTCA----CAGTTTTTCAATTCAGAAATGT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1364394 57 + 3566421 ---AATATTACATAAGGAT-ATGCTTGTAAA-ATAATTCA----CAGTTTTTCAATTCAGAAATGT i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12695026 50 + 14340318 ------------TAAAGATGATGCTTATAAAAGTAATTCA----CAGTTTTTCATTTCAGGGATAT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51737262 62 - 55844845 ---AATGTTACATAATAAT-ATATTTATAGAATGAATCCATGATGATTTTTTTAAATCAGAGATTA i canFam3.chr18 I 140 I 1 s dasNov3.JH578441 1137529 63 + 1446996 AATAATGTTGCCCAAG--T-GAGTATGTAGAAAGAGTCCACAATGAGTTATATGATTTAGGGATAT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 997559 747 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=17402.000000 s hg38.chrUn_KI270749v1 40218 2 + 158759 AT s panTro5.chr1 101866488 2 - 228573443 AT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108495759 2 - 162613886 AT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 18422 2 - 126596 AT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744416 2 + 99891981 AT i nomLeu3.chr17 C 0 C 0 s cerAty1.NW_012000909v1 2473242 2 + 10077455 AT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5681239 2 + 127223203 AT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1125445 2 - 1799296 AT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1724157 2 + 6934359 AT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108082847 2 - 128169293 AT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 703940 2 - 18371965 AT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1364451 2 + 3566421 AT i cebCap1.NW_016107540v1 C 0 C 0 s tarSyr2.KE946558v1 998306 2 - 1121937 AC i tarSyr2.KE946558v1 I 747 I 680 s otoGar3.GL873564 12695076 2 + 14340318 AT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51737325 2 - 55844845 AT i canFam3.chr18 I 1 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e macNem1.NW_012011522v1 2752962 0 + 3123512 C e rheMac8.chr3 133441276 0 - 185818997 C e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e dasNov3.JH578441 1137592 0 + 1446996 C e macFas5.chr3 67270906 0 + 192294377 C a score=1710523.000000 s hg38.chrUn_KI270749v1 40220 199 + 158759 GTG----AAAAAATCATCAATCATCTAATGGATTTCAAGGAGAAATGGGTTAGTAATTTATTC----CATATGTCTCAATTTTTCCTAGACTCAAGGCTTCCTTTAAAATAATTGTAGGCGTTTAAGAAACCATGTAAACTAAAAAGAAGAAATTGTGACACTGCC--GCTTAGG--TT-----------------------TTTTAAATCTTTGGACATGA----TTCAATATATTT s panTro5.chr1 101866490 198 - 228573443 GTG----AAAAA-TCATCAAGCATCTAATGGATTTCAAGGAGAAATGGGTTAGTAATTTATTC----CATATGTCTCAATTTTTCCTAGATTCAAGGCTTCCTTTAAAACAATTGTAGGCTTTTAAGAAACCACGTAAACTAAAAAGAAGAAATTGTGACACTACT--GCTTAGG--TT-----------------------TTTTAAATCTTTGGACATGA----ATCAATATACTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108495761 198 - 162613886 GTA----AAAAA-TCATTAAGCATCTAATGGATTTCAAGGAGAAATGGGTTAGTAATTTATTC----CATATGTCTCAATTTTTCCTGGACACAAGGCTTCCTTTAAAATAATTGTAGGCATTTAAGAAGCCATGTAAACTAAAAAGAAGAAATTATGACACTGCCTGGTTAGGA--TT-----------------------TTTTAAATCTTTGGACATGA----ATCAATAT--TT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 18424 198 - 126596 GTG----AAAAA-TCACCAAACATCTAATGGATTTCAAGAAGAAATGGGTTAGTAATTTATTC----CATATGTCTCAATTTTTCCTAGACTCAAGACTTCCTTTAAAATAATTGTAGGCATTTAAGAAACCATGTAAACTAAAAAGAAGAAATTGTGACACTGCC--GCTTAGG--TT-----------------------TTTTAAGTCTTTGGACATGA----TTCAATATATTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744418 198 + 99891981 ATG----AAAAA-TCATCAAGCATCTAATGGATTTCAAGGAGAAATGGGTTAGTAATTTATTC----CATATGTCTCAATTTTTCCTAGACACAAGGCTTCCTTTAAAACAATTGTAGGCATTTAAGAAACCATGTAAACTAAAAAGAAGAAATTGTGACACTGCCTGGTTAAGT--TT-----------------------TTTAAAATATTTGGACATGA----ATCAATAT--TT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133441276 197 - 185818997 --G----AAAAA-TCATCAAGCCTTTAATGGATTTCAAGAAGAAATGGGTTAGTAATTTATTC----CATATGTCTCAATTTTTCCTAGATGCAAGACTTCCTTTAAAATAATTGTAGGCATTTGAGAAATCATGTAGACTCAAAAGAAGATATTTTGTCACTGCCTGGCT-AGG--TT-----------------------TTTTAAATCTTTAGACATGA----ATCAATATATAT i rheMac8.chr3 C 0 I 4 s macFas5.chr3 67270906 197 + 192294377 --G----AAAAA-TCATCAAGCCTTCAATGGATTTCAAGAAGAAATGGGTTAGTAATTTATTC----CATATGTCTCAATTTTTCCTAGATGCAAGACTTCCTTTAAAATAATTGTAGGCATTTGAGAAATCATGTAGACTCAAAAGAAGATATTTTGTCACTGCCTGGCT-AGG--TT-----------------------TTTTAAATCTTTAGACATGA----ATCAATATATAT i macFas5.chr3 C 0 I 4 s macNem1.NW_012011522v1 2752962 197 + 3123512 --G----AAAAA-TCATCAAGCCTTTAATGGATTTCAAGAAGAAATGGGTTAGTAATTTATTC----CATATGTCTCAATTTTTCCTAGATGCAAGACTTCCTTTAAAATAATTGTAGGCATTTGAGAAATCATGTAGACTCAAAAGAAGATATTTTGTCACTGCCTGGCT-AGG--TT-----------------------TTTTAAATCTTTAGACATGA----ATCAATATATAT i macNem1.NW_012011522v1 C 0 I 4 s cerAty1.NW_012000909v1 2473244 197 + 10077455 GTG----AAAAA-TCATCAAGCCTCTAAAGGATTTCAAGAAGAAATGGGTTAGTAATTTATTC----CGTATGTCTCAATTTTTCCTAGATGCAAGACTTCCTTTAAAATAATTGTAGGCATTTAAGAAATCATGTAGACTCAAAAGAAGATATTGTGTCACTGCCTGGCT-AGG--TT-----------------------TTTTAAATCTTTGGACATGA----ATCA--ATATTT i cerAty1.NW_012000909v1 C 0 I 4 s chlSab2.chr21 5681241 197 + 127223203 GTG----AAAAA-TCATCAAGCCTCTAAAGGATTTCAAGAAGAAATGG----GTAATTTATTC----CATATGTCTCAATTTTTCCTAGATGCAAGACTTCCTTTAAAATAATTGTAGGCATTTAAGAAATCATGTAGACTCAAAAGAAGATATTGTGTCACTGCCTGGCT-AGGTTTT-----------------------TTTTAAATCTTTGGACGTGA----ATCAATATATAT i chlSab2.chr21 C 0 I 19 s manLeu1.NW_012105809v1 1125447 199 - 1799296 GCA----AAAAC-TCATCAAGCCTCTAAAGGATTTCAAGAAGAAATGGGTTAGTAATTTATTT----CGTATGTCTCAATTTTTCCTAGATGCAAGACTTCCTTTAAAATAATTGTAGGCATTTAAGAAATCATGTAGACTCAAAAGAAGATATTGTGTCACTGCCTGGCT-AGG--TT-----------------------TTTTAAATCTTTGGACATGA----ATCAATATTTTT i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 1724159 199 + 6934359 GTG----AAAAA-TCATCAAGCCTCTAATGGATTTCAAGAAGAAATGGGTTAGTAATTTATTC----CATATGTCTCAATTTTTCCTAGATGCAAGACTTCCTTTAAAATAATTGTAGACATTTAAGAAATCACGTAGATTCAAAAGAAGATATTGTGTCACTGCCTGGCT-AGG--TT-----------------------TTTTAAATCTTTGGACATGA----ATCAATATTTTT i colAng1.NW_012115910v1 C 0 I 2 s calJac3.chr8 108082849 196 - 128169293 GTG----AAAAA-TCACCAAGTATCTAACGGATTTCAAGGAGAAATAGGTTAATAATTTATTC------CACGTCTCCATTTTTCCTAGACTCAAGACCTCCTTTAAAATAATTGTAGGCATCTAAGAAACCATGTAAACTCA-AAGAAGATATTGTGACACTGCGTGGTT-AGG--TT-----------------------TTTTAAATATTTGGACATTA----ATCAGTATTTTT i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 703942 199 - 18371965 GTG----AAAAA-TCATCAAGTATCTAACGGATTTCAAGGAGAAATTGGTTAATAATTTATTC----TATATGTCTCCATTTTTTCTGGACTCAAAAATTCCTTTAAAATAATTATAGGCATTTAAAAAACCAGGTAAACCCAGAAGAAGATATTGTGACACTGTCTGGTT-ACG--TT-----------------------TTTTAAATATCTGGACATGG----ATCAATATTATT i saiBol1.JH378145 C 0 I 3 s cebCap1.NW_016107540v1 1364453 198 + 3566421 GTG----AAAAA-TCATCAGGTATCTAATGG-TTTCAAGGAGAAATTGGTTAATAATTTATTC----CATATGTCTCCATTTTTCCTAGACTCAAAACCTCCTTTAAAATAATTGTAGGCATTTAAGAAACCATGTAAACTCAAAAGAAGATATTGTGACACTGCCTGGTT-ACA--TT-----------------------TTTTAAATATCTGGACATGA----ATCAATATTTTT i cebCap1.NW_016107540v1 C 0 I 3 s otoGar3.GL873564 12695078 191 + 14340318 GTAT---AAAAA-GCTTCAAATATCCAATGAGTTACAAAAATAACTGGGTTAAGAACTTAGTC--------TGTTGCAATTTTTCCTAGGGGCAAGTTGTCCTTTAAAATAATTGTGGGCATCTGAGAACACAACTCAATACA-AATAATACAATGCAACA---TCTGATT-TGG--TT-----------------------TTAAAAATCT-TGAACATGA----GTAGATATTATT i otoGar3.GL873564 C 0 I 1 s canFam3.chr18 51737327 191 - 55844845 ---ATGTAAAAA-TCCTCAAGCATCTAGAATTTTCTAATGATGAATAGGTTAATAACTTATTC----AGCATATCACAATTTTTCCTGGAACCAGGGCCTCCCTTAAAATAATCATGAG-ATTCAAGAGCCGATGTTAACTCAAAAGAGGATAACA--------ACTAGTT-Gtt--tt-----------------------tttttaaactttaaatgtga----atatatatattt i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1137592 180 + 1446996 ------------------------------------------AAGTGGGTTATTAATTTATTCATTACATACATCATGATTTTTCCTAGAGGCAAGACCTCC-TTAAAATAATCCTGGGCATTTAAGAACCCACGTTAACTCTAA------------TACAATGACTGGCT-TGG--ATGCATATTTATACATATATTTTCATTGTGGGTTTTAGTGCATGATCTCTTCAGAAGAACT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998308 680 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=34302.000000 s hg38.chrUn_KI270749v1 40419 4 + 158759 TTTA s panTro5.chr1 101866688 4 - 228573443 TTTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108495959 4 - 162613886 TTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 18622 4 - 126596 TTTA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744616 4 + 99891981 TTAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133441477 4 - 185818997 TTTA i rheMac8.chr3 I 4 C 0 s macFas5.chr3 67271107 4 + 192294377 TTTA i macFas5.chr3 I 4 C 0 s macNem1.NW_012011522v1 2753163 4 + 3123512 TTTA i macNem1.NW_012011522v1 I 4 C 0 s cerAty1.NW_012000909v1 2473445 4 + 10077455 TTTA i cerAty1.NW_012000909v1 I 4 C 0 s manLeu1.NW_012105809v1 1125648 4 - 1799296 TTTA i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 1724360 4 + 6934359 TTTA i colAng1.NW_012115910v1 I 2 C 0 s calJac3.chr8 108083048 4 - 128169293 TTCA i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 704144 4 - 18371965 TTCA i saiBol1.JH378145 I 3 C 0 s cebCap1.NW_016107540v1 1364654 4 + 3566421 TTTA i cebCap1.NW_016107540v1 I 3 C 0 s canFam3.chr18 51737518 4 - 55844845 ttta i canFam3.chr18 C 0 I 239 s dasNov3.JH578441 1137772 4 + 1446996 TCCA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998308 680 - 1121937 I e otoGar3.GL873564 12695269 1 + 14340318 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e chlSab2.chr21 5681438 19 + 127223203 I a score=-3747.000000 s hg38.chrUn_KI270749v1 40423 8 + 158759 -------AATTGTAT------------ s panTro5.chr1 101866692 7 - 228573443 -------A-TTTTAT------------ i panTro5.chr1 C 0 C 0 s panPan2.chr7 108495963 8 - 162613886 -------AATTTTAT------------ i panPan2.chr7 C 0 I 5 s gorGor5.CYUI01000522v1 18626 8 - 126596 -------AATTGTAT------------ i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744620 8 + 99891981 -------CATTTTAT------------ i nomLeu3.chr17 C 0 I 5 s rheMac8.chr3 133441481 6 - 185818997 ---------TTTTGT------------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271111 6 + 192294377 ---------TTTTGT------------ i macFas5.chr3 C 0 I 5 s macNem1.NW_012011522v1 2753167 6 + 3123512 ---------TTTTGT------------ i macNem1.NW_012011522v1 C 0 I 5 s cerAty1.NW_012000909v1 2473449 6 + 10077455 ---------TTTTGC------------ i cerAty1.NW_012000909v1 C 0 I 5 s manLeu1.NW_012105809v1 1125652 6 - 1799296 ---------TTTTGC------------ i manLeu1.NW_012105809v1 C 0 I 5 s colAng1.NW_012115910v1 1724364 6 + 6934359 ---------TTTTGT------------ i colAng1.NW_012115910v1 C 0 I 5 s calJac3.chr8 108083052 6 - 128169293 ---------TTTTAA------------ i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 704148 6 - 18371965 ---------TTTTAA------------ i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1364658 6 + 3566421 ---------TTTTAA------------ i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12695270 7 + 14340318 --------ATTTCAT------------ i otoGar3.GL873564 I 1 I 5 s dasNov3.JH578441 1137776 27 + 1446996 AAATGGGGGTTTTATATAAGGGTTTGT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998308 680 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e canFam3.chr18 51737522 239 - 55844845 I e chlSab2.chr21 5681438 19 + 127223203 I a score=472262.000000 s hg38.chrUn_KI270749v1 40431 55 + 158759 CTTAATTAGA----------------CATTGTGAGTT----C--------------ACCATCTTCCTGTCAGTATTGCATCCAAGCTGA-- s panTro5.chr1 101866699 55 - 228573443 CTTAATTAGA----------------CATTGTGAGTT----C--------------ACTATCTTCCTGTCAGTATAGCATCCAAGCTGA-- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108495976 55 - 162613886 CTTAATTAGA----------------CATTGTGAGTT----C--------------ACCATCTTCCTGTCGGTATAGCATCCAAGCTGA-- i panPan2.chr7 I 5 C 0 s gorGor5.CYUI01000522v1 18634 55 - 126596 CCTAATTAGA----------------CATTGTGAGTT----C--------------ACCGTCTTCTTGTCAGTATAGCATCCAAGCTGA-- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744633 55 + 99891981 CTTAATTAGA----------------CATTGTGAGTT----C--------------ACCATCTTACTGTCAGTATAGCATCCAAGCTGA-- i nomLeu3.chr17 I 5 C 0 s rheMac8.chr3 133441487 55 - 185818997 CTTAATTAGA----------------TGTTGTGAGTT----C--------------ACCATCTTACTGTCAGTATAGCATCCAAGCTGA-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271122 55 + 192294377 CTTAATTAGA----------------TGTTGTGAGTT----C--------------ACCATCTTACTGTCAGTATAGCATCCAAGCTGA-- i macFas5.chr3 I 5 C 0 s macNem1.NW_012011522v1 2753178 55 + 3123512 CTTAATTAGA----------------TGTTGTGAGTT----C--------------ACCATCTTACTGTCAGTATAGCATCCAAGCTGA-- i macNem1.NW_012011522v1 I 5 C 0 s cerAty1.NW_012000909v1 2473460 55 + 10077455 CTTAATTAGA----------------TGTCGTGAGTT----C--------------ACCATCTTACTGTCAGTATAGCACCCAAGCTGA-- i cerAty1.NW_012000909v1 I 5 C 0 s chlSab2.chr21 5681457 55 + 127223203 CTTAATTAGC----------------TATTGTGAGTT----C--------------ACCATCTTACTGTCAGTATAGCATCCAAGCTGA-- i chlSab2.chr21 I 19 C 0 s manLeu1.NW_012105809v1 1125663 55 - 1799296 CTTAATTAGA----------------TGTTGTGAGTT----C--------------ACCATCTTACTGTCAGTATAGCATCCAAGCTGA-- i manLeu1.NW_012105809v1 I 5 C 0 s colAng1.NW_012115910v1 1724375 55 + 6934359 CTTAATCAGA----------------TGTTGTGAGTT----C--------------ACCATCTTACTGTCAGTATAGCATCCAAGCTGA-- i colAng1.NW_012115910v1 I 5 C 0 s calJac3.chr8 108083058 54 - 128169293 CTTAATT-GA----------------CATCATGAGTT----C--------------ACCATCTTACTGTTAGTATAGCATCCAAGCTGA-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 704154 54 - 18371965 CTTCATT-GA----------------CATTGTACATT----C--------------ACCATCTTACTGTTAGTGTAGCATCCAAGCTGA-- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1364664 54 + 3566421 CTTAATT-GA----------------CATTGTGTGTT----C--------------ACCATCTTACTGTTAGTGTAGCATCCAAGCTGA-- i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12695282 51 + 14340318 -CTAATTGGA----------------CATGGTGAGTTGATCC--------------ACCATCTTCCTATCATTAGAAGAGAC--------- i otoGar3.GL873564 I 5 C 0 s dasNov3.JH578441 1137803 85 + 1446996 CTTGAAGAGAGTGGACTCTCTTACAGCATTTTAAATT----CCTTTCTTAATTTCAACACTCTTATTGTCATTATAATATCCAAG--GAAT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998308 680 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e canFam3.chr18 51737522 239 - 55844845 I a score=352001.000000 s hg38.chrUn_KI270749v1 40486 50 + 158759 TTATCAT---AGATTAGAAGTTCAACTATCA---ACT--G--TGTTCTGAGAGTC--TAAAA s panTro5.chr1 101866754 50 - 228573443 TTATCAT---AGATTACAAGTTCAACTATCA---ACT--G--TGTTCTGAGACTC--TAAAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496031 50 - 162613886 TTATCAT---AGATTACAAGTTCAACTATCA---ACT--G--TGTTCTGAGAGTG--TAAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 18689 50 - 126596 TTATCAT---AGATTAGAAGTTCAACTATCA---ACT--G--TGTTCTGAGAGTT--TAAAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744688 49 + 99891981 TTATCAC---AGACTACAAGTTCAACTGTCA---ACT-----TGTTCTGAGAGTT--TAAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133441542 50 - 185818997 TTATCAT---AAATTACAACGTCAACTGTCA---ACT--G--TGTTCTGAGAGTT--AAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271177 50 + 192294377 TTATCAT---AAATTACAACGTCAACTGTCA---ACT--G--TGTTCTGAGAGTT--AAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753233 50 + 3123512 TTATCAT---AAATTACAACGTCAACTGTCA---ACT--G--TGTTCTGAGAGTT--AAAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2473515 50 + 10077455 TTATCAT---AAATTACAATGTCAACTGTCA---ACT--G--TGTTCTGAGAGTT--AAAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5681512 52 + 127223203 TTATCAT---AAATTACAATGTCAACTGTCA---ACT--G--CGTTCTGAGAGTTTAAAAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1125718 50 - 1799296 TTATCAT---AAATTACAGTGTCAACTGTCA---ACT--G--TGTTCTGAGAGTT--AAAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1724430 50 + 6934359 TTATCAT---AAATTACAACTTCAACTGTCA---ACT--G--TGTTCTGACAGTT--AAAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108083112 49 - 128169293 TTATCAT---AGATTACGACTTCAACTGACA---ACT--G--TGTTCTGGGAAGT--ATAA- i calJac3.chr8 C 0 I 338 s saiBol1.JH378145 704208 49 - 18371965 TTATCAT---AGATTATGAATTTAAGTGTCA---AAT--G--CGTCCTGGGAATT--ATAA- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1364718 49 + 3566421 TTATCAC---AGATTACGACTTCAACTGTCA---ACT--G--TGTTCTGGGAATT--ATAA- i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12695333 44 + 14340318 -----------GATGATGGCTTCCATTGTCA---TCTACA--TGTCAGGGGAGTT--TACAA i otoGar3.GL873564 C 0 I 2 s canFam3.chr18 51737761 52 - 55844845 ctgcccA---AGATTATGGTTTCAAGTGCTATGTACT-----TGTTCTGTGAAAT--CAAAA i canFam3.chr18 I 239 C 0 s dasNov3.JH578441 1137888 54 + 1446996 TTATAGTAGAAGATTCCAACCTTGCGAGTCC---TAT--AATTGTCATGGGAGTT--AAAA- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998308 680 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=87355.000000 s hg38.chrUn_KI270749v1 40536 13 + 158759 -AAATAAATGAACG s panTro5.chr1 101866804 13 - 228573443 -AAATAAATGAATG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496081 13 - 162613886 -AAATAAATGAATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 18739 13 - 126596 -CAATAAATGAATG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744737 13 + 99891981 -AACTAAATGAATG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133441592 13 - 185818997 -AAAGAAATGAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271227 13 + 192294377 -AAAGAAATGAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753283 13 + 3123512 -AAAGAAATGAATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2473565 13 + 10077455 -AAAGAAATGAATG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5681564 13 + 127223203 -AAAGAAATGAATG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1125768 13 - 1799296 -AAAGAAATGAATG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1724480 13 + 6934359 -AAAGAAATGAATG i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 704257 13 - 18371965 -AAAGAAATGAATG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1364767 13 + 3566421 -AAAGAAATGAATG i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12695379 9 + 14340318 -----AAATGAATA i otoGar3.GL873564 I 2 I 4 s canFam3.chr18 51737813 12 - 55844845 --GAGAAGTTAATG i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1137942 14 + 1446996 ACTTAAGCTGCTTG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998308 680 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I e calJac3.chr8 108083161 338 - 128169293 I a score=21068.000000 s hg38.chrUn_KI270749v1 40549 2 + 158759 TA s panTro5.chr1 101866817 2 - 228573443 TA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496094 2 - 162613886 TA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 18752 2 - 126596 TA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744750 2 + 99891981 TA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133441605 2 - 185818997 TA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271240 2 + 192294377 TA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753296 2 + 3123512 TA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2473578 2 + 10077455 TA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5681577 2 + 127223203 TA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1125781 2 - 1799296 TA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1724493 2 + 6934359 TG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108083499 2 - 128169293 TG i calJac3.chr8 I 338 C 0 s saiBol1.JH378145 704270 2 - 18371965 TA i saiBol1.JH378145 C 0 I 453 s cebCap1.NW_016107540v1 1364780 2 + 3566421 TA i cebCap1.NW_016107540v1 C 0 I 283 s otoGar3.GL873564 12695392 2 + 14340318 TG i otoGar3.GL873564 I 4 C 0 s canFam3.chr18 51737825 2 - 55844845 TG i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1137956 2 + 1446996 TA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998308 680 - 1121937 I e aotNan1.NW_018514471v1 1867402 147 - 9267652 I a score=543074.000000 s hg38.chrUn_KI270749v1 40551 52 + 158759 TTTG----GGTATTCTTAAAGC----------AGGAG--------TGAGGACACAGTGAAAGTGAGAC---AAGGAA s panTro5.chr1 101866819 56 - 228573443 TTTGTTTGGGTATTCTTAAAGC----------AGGAG--------TGAGGACACAGTGAAAGTGAGAC---AAGGAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496096 56 - 162613886 TTTATTTGGGTATTCTTAAAGC----------AGGAG--------TGAGGACACAGCAAAAGTGAGAC---AAGGAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 18754 56 - 126596 TTTGTTTGGGTATTCTTAAAGC----------AGGAG--------TGAGGACACAGCGAAAGTGAGAC---AAGGAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744752 59 + 99891981 TTTGTTTGGGTATTCTTAAAGC----------AGGAG--------TGAGGACACagtgaaagtgaaacagaaaggaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133441607 56 - 185818997 TTTGTTTGGATATTCTTAAAGC----------AGgag--------tgaggacacagtgaaagtgagac---gaggaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271242 56 + 192294377 TTTGTTTGGATATTCTTAAAGC----------AGgag--------tgaggacacagtgaaagtgagac---gaggaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753298 56 + 3123512 TTTGCTTGGATATTCTTAAAGC----------AGgag--------tgaggacacagtgaaagtgagac---gaggaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2473580 55 + 10077455 TTTGTTTGGGTATTCTTAAAGC----------AGGAG--------TGAGGACACAGTGAAAGTGAGAC---GAGGA- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5681579 56 + 127223203 TTTGTTTGGGTATTCTTAAAGC----------AGGAG--------TGAGGACACAGTGAAAGTGAGAC---GAGGAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1125783 56 - 1799296 TTTGTTTGGGTATTCTTAAAGC----------AGGAG--------TGAGGACACAGTGAaagtgagac---gaggaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1724495 55 + 6934359 TTTGTTTGGGTATTCTTAAAGC----------AGGAG--------TGAGGACACAGTGAAAGTGAGAC---GAGGA- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108083501 52 - 128169293 ----TTTGGGTGTTCTTAAAGC----------AGGAG--------TGAGGACATAGTAAAATTGAGAC---AAAGAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 704725 52 - 18371965 ----TTTGGGTGTTCTTAAAGC----------AGGAG--------TGAGGACATAGCGAAACTGAGAC---CAAAAG i saiBol1.JH378145 I 453 C 0 s cebCap1.NW_016107540v1 1365065 47 + 3566421 ----TTTGGGTGTTCTTAAAGC----------AGGAG--------TGAGAACATAGTGAAATT--------AAAGAG i cebCap1.NW_016107540v1 I 283 C 0 s aotNan1.NW_018514471v1 1867549 52 - 9267652 ----TTTGGGTGTTCTTAAAGC----------AGGAG--------TGAGGACATAGTGAAATTGGCAC---AAAGAG i aotNan1.NW_018514471v1 I 147 C 0 s otoGar3.GL873564 12695394 62 + 14340318 ----TTTGGGTGATCTCAAAGCCAACATAGTGAAACA--------CGAAAACATCGTGAAAGTGAGAC---ATAGAA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51737827 56 - 55844845 -------GGGTTTTTTGGGGGG----------TGGGGAATAATCTTCAAAACAT-GTGAAAGGGAGAC---AAGGAA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1137958 45 + 1446996 -----------ATTTCAAGAAC----------ATGAG--------TGAGGAAGTGGTAGAAATAAGAC---AAAGAA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998308 680 - 1121937 I a score=-9424.000000 s hg38.chrUn_KI270749v1 40603 3 + 158759 AAG s panTro5.chr1 101866875 3 - 228573443 GAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496152 3 - 162613886 GAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 18810 3 - 126596 AAG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744811 3 + 99891981 gag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133441663 3 - 185818997 gag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271298 3 + 192294377 gag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753354 3 + 3123512 gag i macNem1.NW_012011522v1 C 0 C 0 s chlSab2.chr21 5681635 3 + 127223203 GAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1125839 3 - 1799296 gag i manLeu1.NW_012105809v1 C 0 C 0 s calJac3.chr8 108083553 2 - 128169293 AT- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 704777 3 - 18371965 AGA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1365112 2 + 3566421 AG- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1867601 1 - 9267652 A-- i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 998988 2 - 1121937 aa- i tarSyr2.KE946558v1 I 680 I 904 s otoGar3.GL873564 12695456 2 + 14340318 -AG i otoGar3.GL873564 C 0 I 1 s canFam3.chr18 51737883 3 - 55844845 GAG i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1138003 3 + 1446996 AAG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e colAng1.NW_012115910v1 1724550 0 + 6934359 C e cerAty1.NW_012000909v1 2473635 0 + 10077455 C a score=2754482.000000 s hg38.chrUn_KI270749v1 40606 335 + 158759 AGA-----ACAAAATAAAACAG-----GAAAGAGAGACAAGCCAATACCAC--ACGTGTTAAGAGGTAAGTTCCTGTGTT-------------------------------------AGATATCTGGGC----TTAATTTTATGGGAAGCTATGTGGAGCAT-GCCTCAGAA--TTACATCACTGAATCCAGGGA----------GA-------------TTCTTCC------TAGT-------TACCC-TCA--------------GCTTTTCTT-----------CCCACTTC-------ATGCCCAGTCACAAGCTCCCGTGCTGCTAGAGAAAGTCCTCAGCTA-GAAAC--AGGTGCAAATTC-TGGAGATGAGACCTT-G-----TAGAGTGTT-AAGAATGGTTTTCTTCCCAGCAGCTACAG-GTAAGGAATAGGGGCTGGGCTATT-AATACATCTGCTACAAA s panTro5.chr1 101866878 335 - 228573443 AGA-----ACAAAATAAAACAG-----GAAAGTTAGAAAAGCCAGTACCAC--ACGTGTTAAGAGGCAAGTTCCTCTGTT-------------------------------------AGATATCTGGGC----TTAATTCTATGGGAAGCTATGTGGAACAT-GCCTCAGAA--TTACATTACTGAATCCAGGGA----------GA-------------TTCTTCT------TAGT-------TACCC-TCA--------------CCTTTTCTT-----------CCCACTTC-------ATGCCCAGTATCAAACTGCCGTGCTGCTAGAGAAAGTCCTCAGTTA-GAGAC--AGCTGCAAATTC-TGGAGATGAGACCCT-G-----TAGAGTGTT-AAGAATGGTTTTCTTCCAGGCAGCTACAG-GTAAGGAATAGGGTCTGGGCTATT-AATACATCTGCTACAAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496155 324 - 162613886 AGA-----ACAaaataaaacag-----gaaagatagaaaagccagtaccac--acgtgttaagaggcaagttcctgtgtt-------------------------------------agatatctgggc----ttaattctctgggaagctatgtggaacat-gcctcagaa--ttacatcactgaatccaggga----------gA-------------TTCTTCT------TAGT-------TACCC-TCA--------------CCTTCTCTT-----------CCCACTTC-------ATGCCCAGTAACAAGCTCCCGTGCTGCTAGAGAAAGTCCTCAGCTA-GAAAC--AGGTGCAACTTC-TGGAGATGAGACCTT-G-----TAGA------------GGTTTTCTTCCCAGCAGCTACAG-GTAAGGGATAGGGGCTGGGCTATT-AATACATCTGCGGCAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 18813 334 - 126596 GGA-----ACAACATAAAACAG-----GAAAGATAGAAAAGCCAATACCAC--ACGTGTTAAGAGGTAAGTTCCTGTGTT-------------------------------------AGATATCTGGGC----TTAATTCTATGGGAAGCTATGTGGAGCAT-GCCTCAGAA--TTACATCACTGAATCCAGGGA----------GA-------------TTCTTCT------TAGT-------TACCC-TCA--------------CCTTTTCTT-----------CCCACTTC-------ATGCCCAGTATCAAGC-CCCGTGCTGCTAGAGAAAGTCCTCAGCTA-GAAAC--AGGTGCAAATTC-TGGAGATGAGACCTT-G-----TAGAGTGTT-AAGAATGGTTTTCTTCCCAGCAGCTACAG-GTAAGGAATAGGGGCTGGGCTATT-TATACATCTGCTACAAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55744814 336 + 99891981 aga-----gaaaaataaaacag-----gaaaaatagaaaAGCCAATACCAC--ATGTGTTAAGAGGCAAGTTCTTGTGTT-------------------------------------AGATATCTGGGC----TTAATTCTGTGGGAAGCTATGTGGAACAT-GCCTCAGAA--TTACATCACTGAATCCAGGGA----------GA-------------ATCTTCT------TAGT-------TACCC-TCA--------------CCTTTTCTT-----------CCCACTTC-------ATGCCCAGTAACAAGCTCCGGTGCTGCAAGAGAAAGTCCTCGGCTA-GAAAC--AGGTGCAAATTC-TGGAGATGAGACCTTGG-----TAGAGAGTT-AAAAATGGTTTTCTTCCCAGCAGCTACAG-GTAAGGGATAGGGGCTGGGCTATT-AATACATCTGCTACAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133441666 336 - 185818997 agagagagaaaaaaaaaaaaaaaacaggaaagatagaaaaGCCGATACCAT--ATGTGTTAAGAGGCAAGTTCTTGTGTT-------------------------------------AGATATCTGGGC----TTAATTCTATGGGAAGCTACGCGGAACAT-GCCTCAGAA--TTACATCACTGAATCTAGGGA----------GA-------------ATCTTCT------TAGT-------TACCC-TCA--------------CCTCTTCTT-----------CCCACTCC-------ATGCCCAGTAATAAGCTCCCATGCTGCTAGAGAAAGTCCTCAGGTA-GAAAC--AGGTGCAAATAC-TGGAGATGAGACCTT-G-----TAGAGTGTT-AACAATGGTTTTCTTCCGAGCAGCTACAG-GTAAGGGAAAGGGGCTGGG----------CATCCGGTACAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271301 335 + 192294377 agagagagaaaaaaaaaaaaaaaacc-gaaagatagaaaAGCCGATACCAT--ATGTGTTAAGAGGCAAGTTCTTGTGTT-------------------------------------AGATATCTGGGC----TTAATTCTATGGGAAGCTACGCGGAACAT-GCCTCAGAA--TTACATCACTGAATCTAGGGA----------GA-------------ATCTTCT------TAGT-------TACCC-TCA--------------CCTCTTCTT-----------CCCACTCC-------ATGCCCAGTAATAAGCTCCCATGCTGCTAGAGAAAGTCCTCAGGTA-GAAAC--AGGTGCAAATAC-TGGAGATGAGACCTT-G-----TAGAGTGTT-AACAATGGTTTTCTTCCGAGCAGCTACAG-GTAAAGCAAAGGGGCTGGG----------CATCCGGTACAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753357 331 + 3123512 agagagagaaaaaaaaaaacag-----gaaagatagaAAAGCCGATACCAT--ATGTGTTAAGAGGCAAGTTCTTGTGTT-------------------------------------AGATATCTGGGC----TTAATTCTATGGGAAGCTACGCGGAACAT-GCCTCAGAA--TGACATCACTGAATCTAGGGA----------GA-------------ATCTTCT------TAGT-------TACCC-TCA--------------CCTCTTCTT-----------CCCACTCC-------ATGTCCAGTAATAAACTCCCATGCTGCTAGAGAAAGTCCTCAGGTA-GAAAC--AGGTGCAAATAC-TGGAATTGAGACCTT-G-----TAGAGTGTT-AACAATGGTTTTCTTCCGAGCAGCTACAG-GTAAGGGAAAGGGGCTGGG----------CATCCGGTACAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2473635 329 + 10077455 --AGAGAGAAAAAAAAAAACAG-----GAAAGATAGAAAAGCCAATAGCAC--ATGTGTTAAGAGGCAAGTTCCTGTGTT-------------------------------------AGATATCTGGGC----TTAATTCTATGGGAAGCTACGTGGAACAT-GCCTCAGAA--TTACATCACTGAATCTAGGGA----------AA-------------ATCTTCT------TAGT-------TACCC-TCA--------------CCTCTTCTT-----------CCCACTCC-------ATGCCCAGTAATAAGCTCCCATGCTGCTAGAGAAAGTCCTCAGGTA-GAAAT--AGGTGCAAATAC-TGGAGATGAGACCTC-A-----TAGAGTGTT-AAAAATGGTTTTCTTCCCAGCAACTACAG-GTAAAGGAAAGGGGCTGGG----------CATCTGGTACAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5681638 332 + 127223203 AGAGAAAAAAAAAAAAACACAG-----GAAAGATAGAAAAGCCAATAGCAC--ATGTGTTAAGAGGCAAGTTCCCGTGTT-------------------------------------AGATATCTGGGC----TTAATTCTATGGGAAGCTACGTGGAACAT-GCCTCAGAA--TCACATCACTGAATCCAGGGA----------AA-------------ATCTTCT------TAGT-------TACCC-TCA--------------CCTCTTCTT-----------CCCACTCC-------ATGCCCAGTAATAAGCTCCTATGCTGCTAGAGAAAGTCCTCAGGTA-GAAAT--AGGTGCAAATACTTAGAGATGAGACCTC-G-----TAGGGTGTT-AAAAATGGTTTTCTTCCCAGCAGCTACAG-GTAAGGGAAAGGGGCTGGG----------CATCTGGTACAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1125842 328 - 1799296 agaaaaaaaaaaaacaaca--------gaaagatagaaaagCTAATAGCAC--ATGTGTTAAGAGGCAAGTTCCTGTGTT-------------------------------------AGATATCTGGGC----TTAATTCTACGGGAAGCTACGTGGAACAT-GCCTCAGAA--TTACATCACTGAATCTAGGGA----------AA-------------ATCTTCT------TAGT-------TACCC-TCA--------------CCTCTTCTT-----------CCCACTCC-------ATGCCCAGCAATAAGCTCCCATGCTGCTAGAGAAAGTCCTCAGGTA-GAAAT--AGGTGCAAATAC-TGGAGATGAGACCTC-G-----TAGACTGTT-AAAAATGGTTTTCTTCCCAGCAGCTACAG-GTAAAGGAAAGGGGCTGGG----------CATCTGGTACAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1724550 331 + 6934359 AGAGGGAAACAAAATAAAACAG-----GAAAGATAGAAAAGCCAATACCAC--ATGTGTTAAGAGGCAAGTTGCTGTGTT-------------------------------------AGATATCTGGGC----TTAATTTTATGGGAAGCTACATGGAACAT-GCCTCAGAA--TTACATCACTGAATCTAGGGA----------GA-------------ATCTTCT------TGGT-------TACCC-CCA--------------CCTCTTCTT-----------CCCACTCC-------AAGCCCAGTACTAAGCTCCCAAGCTGCTAGAGAAAGTCCTCAGGTA-GAAAC--AGGTGCAAATAC-TGGAGATGAGACCTT-G-----TAGAGTGTT-AAAAATGGTTTTCTTCCCAGCAGCTACAG-GTAAGGGAAAGGGGCTGGA----------CATCTGGTACAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108083555 267 - 128169293 --------AAAAAATAAAACAG-----GAAAGGTAGAAAAGCCAATATGGC--ATGTGTTAAGACTCATGTTCCTGTGTC-------------------------------------AGATACGTGAGC--------ATCTATGGGATGCTACGTGGAACAC-ACCTCA---------------GAATCCGGGGA----------GA-------------CCCTCCT------TAGA-------TTCCC-TCA--------------CCACTTCTT-----------CCCACCAC-------ACACCCAGTAACAAGCT-CCGTGCTGCTAGAGAAAGTCCTCAGCTA-GAAAC--AGGTGCAAGTAC-TGGACATGAGACCTT-G-----TAGAGTGTT-GAAAATGGTTTTCTTCCCAGCAG------------------------------------------------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 704780 280 - 18371965 GAG--AAAAAAAAATAAATTAA-----GAAAGGTAGAAAAGACAATACGGC--ATGTTTTGAGACGCATGTTCCTGTGTC-------------------------------------AGGTACGTGAGC----TTAATTCTATGGGATGCTGCGTGGAACAC-ACCTCA-------------CTGAGCCCAGGAA----------GA-------------GCCTCCT------TAGA-------AACCC-TCA--------------CCTCTTCTT-----------CCCACCCC-------ACGCCCAGTAACAAGCTCCCGTGCTGCTGGAGAAAGCCCTCAGCCA-GAAAC--AGGTGCAAGTCC-TGGACATGAGGCCTC-A-----TAGAGTGTT-GAAAATGGTTTTCTTCCCGGCAG------------------------------------------------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1365114 286 + 3566421 -------AAAAAAATAAAACGG-----GAAAGGTAGAAAAGACAATACGGC--ATGTGTTAAGACACATGTTCCCCTGTC-------------------------------------AGACACGTGAGC----TTAATTCTATGGGATGTTACGTGGAACAC-ACCTCAGAA--TAGCAGCACTGAATCCAGGAA----------GA-------------CCCTCCT------TAGA-------TACCC-TCA--------------CCTCTTCTT-----------CCCACCCC-------ACGCCCAGTAACAAGCTCCCGTGCTGCTAGAGAAAGTCCTCAGCTA-GAAAC--AGGTGCAAGTAC-TGGACATGAGACCTT-G-----TAGAGTGTC-GAAAATTGTTTTCTTCCCAGCAG------------------------------------------------- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1867602 332 - 9267652 --------AAAAAATAAAACAG-----GAAAGGTAGAAAAGCCAATACGGC--ATGTGTTAAGACGCATGTTCCCGTGTC-------------------------------------AGATACGTGAGC----TTAATTCTGTGGGATGCTACATGGAACAC-ACCTCAGAA--TTGCAGCACTGAATCCAGGGA----------GA-------------CCCTCCT------TAGA-------TACCC-TCA--------------CCACTTGTT-----------CCCACCCC-------ACACCCAGTAACAAGCTCCCGTGCTGCTAGAGAAAGTCCTCAGCTA-GAAAC--AGGTGCAAGTAC-TGGACATGAGACCTC-G-----TAGAGTGTT-GAAAATGGTTATCTTCCCAGCAGATACAG-GTAAGGGATAGGGGGTGGGCTATG-AATACATCTGCTACAAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12695459 371 + 14340318 ------AGAGCAAATAAAACAG-----GAAACACTGTGAAGCCAACGCCAC--GTGCATCATGGAGCAAGTCCCCCGGATCAGTCTCTGGACTCTGCCAAACCCACATGCATCATGGAGAGAGTCGGGC----TCTGGCCTGTAGGAAGCTACACGGAG------CCCAAGG--TTACAGTGG-GAAGGCAGGGA----------G----------------CCCCT------GTGT-------CACCAGTCA--------------CCCTCTCTT----------GTCCCCTCC-------GTGCCCTGCAGC-AGCTCCGGGGCTGCTGGAGAAGGTCCTCAGGGAGGAAGG--AGGGGCTGGGGC-TGCACCAGAGACCCC-ACCCCCTACGGGGCT-GGAAAGGATTTTCTTCCCAGCAGCTGCAGAAGAGGGGACACTGGGTGGACAGCTAAAAACATCTACTACAGG i otoGar3.GL873564 I 1 C 0 s canFam3.chr18 51737886 374 - 55844845 ----AGGAAAGAAATAAAGCCA-----GCAA-ATAGAAAAG-CATTAACATAAATATGTTAATAAACAAATTCTTGTGCT-------------------------------------AGACACCAAAACTCAATCAATTCTGTTGGAAGCCAGGTGGAACAGAACCTCAAAA--CTGTAGTACCAAAGAGAGGGA----------GACCTATATATCTACCTCTCCT------TAATTGTGAGGTGCCC-TTAAGATGTTAGTTTG-ACCATTTTT-----------CTCTTCCC-------ATCCCCAGTAACTATTTCCTCTGGTGCTAGAGTTAGTCCTTATGTA-GAAATGGAGATTAAGCTGC-TGGAGGTTA--CCCT-G-----ACAAGTGTCGGAAAATAGTTTTCTTCCCAGCAGCTTTGC-G-AGAAAACACAGGACAGGCCATT-CGAACATCTGGTATAAA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1138006 365 + 1446996 ------AGAAAATATAAAACAC-----GAAAGGGGGAAAAA------------ATCCAGTGAAA--------CCTACGTT-------------------------------------A---ATTTGGAG----TCAATCCTGCTGTGAACTGTGCGGAACGC-ATCTGAGGATCTTACAGGGACGGGCAGGGGGACTGGTGGACTGA-------------CCCCTCTAGGAGAGAGT-------TGTCC-TCAAGCTGTGCGCCCACCCTCTTCCTTCCTGTTTGCACCTACTGCGCTTGTAATGCCCTGCAGCAAACCATGGTGATACTAGAAAGCACCCTCAGGAA-GAAATGGAGATGCAAATCC-AAAAGGTGGGGCCCT-G----CCAGAGAGTT-GGAAATTGTCTTCTTCACAGATGCTTCTGCTTAGAGGATATGGGGTGCACTATT---TACATCTACTACAAA i dasNov3.JH578441 C 0 I 66 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998990 904 - 1121937 I a score=32334.000000 s hg38.chrUn_KI270749v1 40941 8 + 158759 CCAATGAA---- s panTro5.chr1 101867213 8 - 228573443 TCAATATA---- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496479 8 - 162613886 TCAATATA---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19147 8 - 126596 CCAATAAA---- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55745150 8 + 99891981 TCAATATA---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442002 8 - 185818997 TCAATATA---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271636 8 + 192294377 TCAATATA---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753688 8 + 3123512 TCAATATA---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2473964 8 + 10077455 TCAATATA---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5681970 8 + 127223203 TCAATATA---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126170 8 - 1799296 TCAATATA---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1724881 8 + 6934359 TCAATATA---- i colAng1.NW_012115910v1 C 0 C 0 s aotNan1.NW_018514471v1 1867934 8 - 9267652 TCTGTATT---- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12695830 8 + 14340318 TACACACC---- i otoGar3.GL873564 C 0 I 4 s canFam3.chr18 51738260 12 - 55844845 TACACATCTGTA i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998990 904 - 1121937 I e cebCap1.NW_016107540v1 1365400 0 + 3566421 C e dasNov3.JH578441 1138371 66 + 1446996 I e saiBol1.JH378145 705060 0 - 18371965 C e calJac3.chr8 108083822 0 - 128169293 C a score=-4159.000000 s hg38.chrUn_KI270749v1 40949 1 + 158759 -G s panTro5.chr1 101867221 1 - 228573443 -C i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496487 1 - 162613886 -C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19155 1 - 126596 -G i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55745158 1 + 99891981 -C i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442010 1 - 185818997 -C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271644 1 + 192294377 -C i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753696 1 + 3123512 -C i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2473972 1 + 10077455 -C i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5681978 1 + 127223203 -C i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126178 1 - 1799296 -C i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1724889 1 + 6934359 -C i colAng1.NW_012115910v1 C 0 C 0 s aotNan1.NW_018514471v1 1867942 1 - 9267652 -C i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12695842 1 + 14340318 -T i otoGar3.GL873564 I 4 C 0 s canFam3.chr18 51738272 1 - 55844845 G- i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998990 904 - 1121937 I e cebCap1.NW_016107540v1 1365400 0 + 3566421 C e dasNov3.JH578441 1138371 66 + 1446996 I e saiBol1.JH378145 705060 0 - 18371965 C e calJac3.chr8 108083822 0 - 128169293 C a score=1493653.000000 s hg38.chrUn_KI270749v1 40950 171 + 158759 CCCGTATGCTCCTTTTGGTGATCGAGAATGTATTTAAAAATATTAGATGATCAAGAAGGGCTGCAGAAAGGAGGAAACAGAAACAA-ACAGCACACCCCTTGGTTTAT---TTTTATTCATTTCATCAGTTTCAAGGAAAATATGTTGGGAGTTCCTGGCATAGACAATGTCACA s panTro5.chr1 101867222 171 - 228573443 CCCTTATGCTCCTTTTGGTGATCGACGATGTATTTTAAAATATTAGATGATCAAGAAGGGCTGCAGAAAGGAGGAAAAAGAAACAA-ACAACACACCTCTTTGTTTAT---TTTTATTCATTTCATCAGTTTCAAGGAAAATGTGTTGGGAGTTCCTGGCATAGAGAATGTCACA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496488 168 - 162613886 CCCTTATGCTCCTTTTGGTGATCGACAATGTATTT-AAAATATTAGATGATCAAGAAGGGCTGCGGAAAGGAAGAAACAGAAACGA-ACAGCACACCTC--GGTTTAT---TTTTATTCATTTCATCAGTTTGAAGGAAAATGCATTGGGGCTTCCTGGCATAGAGAATGTCACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19156 171 - 126596 CCCTTATGCTCCTTTTGGTGATCAACAATGTATTTAAAAATATTAGATGATGAAGAAGGGCTGCAGAAAGGAGGAAACAGAAACAA-ACAGCACACCTCTTGGTTTAT---TTTTATTCATTTCATCAGTTTCAAGGAAAATGTGTTGGGAGTTCCTGGCATAGAGAATGTCACA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55745159 168 + 99891981 CCCTTATGCTCCTTCTGGTGATTGACAATGTATTT-AAAATATTAGGTGATCAAGAGGGGCTGCAGAAAGGAGGAAAC--AAATGA-ACAGCACACCTCTTGGTTTAT---TTTTATTCATTTCATCAGTTTCAAGGAAAATGCATTGGGGGTTCCTGGCATAGAGAATGTCACA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442011 170 - 185818997 CCCTTATGCTCCTTTTGGTGATCGACAATGTATTT-AAAATATTAGATGATCAAGAAGGGCTGCAGAAAGGAGGAAACAGAAACAA-ACAGCACACCTCATGGTTTAT---TTTTATTCATTTCATCAGTTTCAAGGAAAATGCATCGGGAGTTCCTGGCATAGAGAACGTCACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271645 170 + 192294377 CCCTTATGCTCCTTTTGGTGATCGACAATGTATTT-AAAATATTAGATGATCAAGAAGGGCTGCAGAAAGGAGGAAACAGAAACAA-ACAGCACACGTCATGGTTTAT---TTTTATTCATTTCATCAGTTTCAAGGAAAATGCATCGGGAGTTCCTGGCATAGAGAACGTCACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753697 170 + 3123512 CCCTTATGCTCCTTTTGGTGATCGACAATGTATTT-AAAATATTAGATGATCAAGAAGGGCTGCAGAAAGGAGGAAACAGAAACAA-ACAGCACACCTCATGGTTTAT---TTTTATTCATTTCATCAGTTTCAAGGAAAATGCATCGGGAGTTCCTGGCATAGAGAACGTCACA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2473973 166 + 10077455 CCCTTATGCTCCTTTTGGTGATCGACAATGTATTT-ACAATATTAGATGATCAAGAAGGGCTGCAGAAAAGAGGAAACAGAAACAA-ACAGCACACATTTTGGTTTAT---TTTTATTCATTTCATCAGTTTCAAGGAAAATGCATCCGGAGTTCCTGGCAT----AATGTCACA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5681979 170 + 127223203 CCCTTATGCTCCTTTTGGTGATCGACAATGTATTT-AAAATATTAGATGATCAAGAAGGGCTGCAGAAAAGAGGAAACAGAAACAA-ACAGCACACATTTTGGTTTAT---TTTTATTCATTTCATCAGTTTCAAGGAAAATGCGTCGGGAGTTCCTGGCATAGAGAATGTCACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126179 168 - 1799296 CCCTTATGCTCCTTTTGGTGATCGACAATGTATTT-AAAATATTAGATGATAAAGAAGGGCTGCAGAAAAGAGGAAAC--AAACAA-ACAGCACACATTTTGGTTTAT---TTTTATTCATTTCATCAGTTTCAAGGAAAATGCGTCGGGAGTTCCTGGCATAGAGAATGTCACA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1724890 170 + 6934359 CCCTTATGCTCCTTTTGGTGATCGACAAGGTATTC-AAAATATTAGATGATCAAGAAGGGCTGCAGAAAGGAGGAAACAGAAACAA-ACGGCACACCTCTTGGTTTAT---TTTTATTCATTTCATCAGTTTCAAGGAAAATGTGTCGGGAGTTCCTGGCATAGAGAATGTCACA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108083822 124 - 128169293 --------------------------------------AATATTAGATGATCAAGAAGTGCTGTAG-AAGGAGAAAAC--AAATAA-ACAGCACACA-CTTGGTGTAA---TTTTA-----TTCATCAGTTTCAAGGAAAATGCATTGGGAGTTCCTGACCTAGGGAATGTCACA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 705060 124 - 18371965 --------------------------------------AATATTAGATGATCAAGAAGTGCTGCAG-AAGGAGAAAAC--AAACAA-ACAGCACACC-GTTGGTTTAA---TTTTA-----TTCATCAGTTTCAAGGAAAATGCACTGGGAGTTCCTGGCACAGGGAATGTCACA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1365400 124 + 3566421 --------------------------------------AATATTAGATGATCAAGAAGTGCTGCAG-AAGGAGAAAAC--AAACAA-ACAGCACACA-CTAGGTTTAA---TTTTA-----TTCATCAGTTTCGAGGAAAATGCATTGGGAATTCCTGGCATAGGGAATGTTACA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1867943 160 - 9267652 CCCTtatgctccttttggtgattcacaatgttttt-aaaatattagatgatcaagaagtgctgcag-AAGGAGAAAAC--AAACAA-ACAGCACACA-CTTAGTTTAA---TTTTA-----TTCATCAGTTTCAAGG-AAATGCATTGGGAGTTCCTGGAATAGGGAATGTCACA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12695843 169 + 14340318 CCCTTCTTCTCCTT-TAGTGATTCACAAGGAACCATGGAATGTTAGAGGACCAAGAAAAGCTGTGG-----AAGATATGCCAACAACACAGTAGCCTTATTTATTCATTTATTTTATTCATTTCCTCAGTCACGAGGAAAATGCTTTGAGAGTTGCTGATATAGAGAATGTGATA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51738273 150 - 55844845 CCTTTATTCTTCATTTGGTGATTCACATTGTATTT-TAGAT-TTAGAACACCTAGAAATCTTGTAG-------------------A-AGATAATATCTCTTGGCTTAT---TTTTATTCATTCCTTCAGTTTCAGGGAAAATGTTTTGGGAGTGGCTGGCATAGAGAATGTAGCA i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998990 904 - 1121937 I e dasNov3.JH578441 1138371 66 + 1446996 I a score=498621.000000 s hg38.chrUn_KI270749v1 41121 51 + 158759 AAGACATGTTTTCAATAGTAGTGCTATCCCTAGGGCAGAG-AAGACCCAGAG s panTro5.chr1 101867393 51 - 228573443 AAGATATGTTTTCAATAGTGGTGCTATCCCTAGGGCAGAG-AAGATCCAGAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496656 51 - 162613886 AAGACATGTTTTCAATAGTGGTGCTATCCCTAGGGCAGAG-AAGACCCAGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19327 51 - 126596 AAGACATGTTTTCAATAGTAGTGCTATCCCTAGGGCAGAG-AAGACCCAGAG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55745327 51 + 99891981 AAGACATGTTTTCAACAGTGGTGCTATCCCTCGGGCAGAG-AAGACCCGGAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442181 51 - 185818997 AAGACATGTTTCCAGTAATAATGCTATCCCTAGGGCGAAG-AAGACCCGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271815 51 + 192294377 AAGACATGTTTCCAGTAATAATGCTATCCCTAGGGCGAAG-AAGACCCGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753867 51 + 3123512 AAGACATGTTTCCAGTAATAATGCTATCCCTAGGGCGAAG-AAGACCCGGAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474139 51 + 10077455 AAGACATGTTTGCAGTAATAGTGCTATCCTTAGGGTGGAG-AAGACCCGGAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682149 51 + 127223203 AAGACATGTTTGCAGTAATAGTGCTATCCCTAGGGCAGAG-AAGACCCGGAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126347 51 - 1799296 AAGACATGTTTGCAGTAATAGTGCTATCCTTAGGGCGGAG-AAGACCCGGAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725060 49 + 6934359 AAG--ATGTTTCCAGTAATAGTGCTATCCCTAGGGCGGAG-AAGACCCGGAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108083946 51 - 128169293 AAGACATGTTGCCAGTAGTGGTGCTATCCCAAGTTCAGGG-AAGACCCGGAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 705184 51 - 18371965 GAGACATGTGTCCAGCAGTGGGGCTATCCCCGCTTCACAG-AAGACCTGGAG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1365524 51 + 3566421 AAGACATGTTTCCAGTAGTGGTGCCATCCCTAGTTCAGGG-AAGACCCGGAG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1868103 51 - 9267652 AAGACATGTTTCCAGTAGTGGTGCTATCCCTAGTTCAGGG-AAGACCCAGAG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12696012 51 + 14340318 AAGACACATGTCCAATGGTGGTGCTCTCACCAGTGAAGGA-CAGACACGTAG i otoGar3.GL873564 C 0 I 44 s canFam3.chr18 51738423 52 - 55844845 AAAACATGTTTCAAGTAGTGATGGTGTCACGAGGGAAGGACAAGACCTGAAA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1138437 28 + 1446996 AAGAAATGCTTC-------------------AGGGAGCAG-AAGTCCC---- i dasNov3.JH578441 I 66 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998990 904 - 1121937 I a score=434043.000000 s hg38.chrUn_KI270749v1 41172 45 + 158759 AAAGCCCAAGTGGCTGATGGAACAAAGTCAGACA-CCGTGCCACCT s panTro5.chr1 101867444 45 - 228573443 AAAGCCCAAGTGGCTGCTGGAACAAAGTCAGACA-CCGTGCCACCT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496707 45 - 162613886 AAAGCCCAAGCGGCTGCCGGAACAAAGTCAGACA-CCGTGCCACCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19378 45 - 126596 AAAGCCCAAGTGGCTGCTGGAACAAAGTCAGACA-CCATGCCACCT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55745378 45 + 99891981 AAAGCCCAAGTGGCTGCTGGAACAAAGTCAGACA-CCATGCCACCT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442232 45 - 185818997 AAAGCCCAAGTGGCTGCTGGAACAAGGTCACAGA-CCGTGCCACCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271866 45 + 192294377 AAAGCCCAAGTGGCTGCTGGAACAAGGTCACAGA-CCGTGCCACCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753918 45 + 3123512 AAAGCCCAAGTGGCTGCTGGAACAAGGTCACAGA-CCGTGCCACCT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474190 45 + 10077455 AAAGCCCAAGTGGCTGCTGGAACAAGGTCACAGA-CCGTGCCACCT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682200 45 + 127223203 AAAGCCCAAGTGGCTGCTGGAATAAGGTCACAGA-CCGTGCCACCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126398 45 - 1799296 AAAGCCCAAGTGGCTGCTGGAATAAGGTCACAGA-CCGTGCCACCT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725109 45 + 6934359 AAAGCCCAAGTGGCTGCTGGAACAAGGTCACACA-CCGTGCCACCT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108083997 45 - 128169293 AAAGCCCAAGTGGCTGCTGGGACAAAGTCAGACA-TGGTGCCACCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 705235 43 - 18371965 GAAGCCCAAGTGGCTGCTGGGAC--CGTCAGACA-GGGTGCCACCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1365575 45 + 3566421 AAAGCCCAAGTGGCTCCTGGGACAAAGGCAGACA-CGGTGCCACCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1868154 45 - 9267652 AAAGCCCAAGTGGCTGCTGGGACAAAGTCAGACA-CAGTGCCACCT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51738475 46 - 55844845 AATCATAAAATAGCTGCTGGGAAAGACACCCACAGCCTTGCCATCT i canFam3.chr18 C 0 I 4 s dasNov3.JH578441 1138465 34 + 1446996 -----------TGCCGAGGAAACACTGACAACAG-CTGCATGATCT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998990 904 - 1121937 I e otoGar3.GL873564 12696063 44 + 14340318 I a score=3038549.000000 s hg38.chrUn_KI270749v1 41217 315 + 158759 GTCCACACTCCTTGGCTCTGCCATCATGCTGAAGATCGC--TTTAAAGGACTGGCTTCCCTCCCCCCAA--AATTAAAAGAGCACAGACTGAGAAACTGAATGTAAGAGACAGCAGTGGATTATGCTGTTCTCAGGGGTCACCT-CAGGTTTGGAAG--CATTC-TTTCAAATTAACCCATCTCAGGCCATCTGCAGAGAAGAAAGGTGGTACCTAAC-TTTTTTTCTTGTCAGCAATTGATAGGGGTGTTTTAT-----TGACCAAATATGTTCCCACAACCTGGT-TTTTTGTGACTAACTAAATATAGTAGATTTTTAA-ATTTT----------------ATC s panTro5.chr1 101867489 318 - 228573443 GTCCACACTCCTTGGCTCTGCCATCATGCTGAAGATTGG--TTGAAAGGGCTGGCTTCCCTCCCAGCAA--AATGAAAAGAGCACAAACTGAGAAACTGAATGTGGGAGGCAGCAGTGGATTATGCTGTTCTCAGGGGTCACCT-CAGGTTTGGAAG--CATTC-TTTCAAATTAACCCATCTCAGGCCATCTGCAGAGAAGAAAGGTGGTACCTAAC-TTTTTTTCTTGTCAGCACTTGGTAGGGGTGTTTTAT-----TGACCAAATATGTTCCCACAACCTAGT-TTTTTGTAACTAACTAAATATAGTAGATTTTTAA-ATTTTAT-------------CATC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108496752 318 - 162613886 GTCCACACTCCTTGGCTCTGCCATCATGCTGAAGATCAG--TTTAAAGGACTGGTTTCCTTCCCCCCAA--AATTAAAAGAGCACAAACTGAGAAACTGAATGTAGGAGACAGTAGTGAATTATGCTGTTCTCGGGGGTCACCT-CAGGTGTGGAAG--CATTC-TTTCAAATTAACCCATGTCAGGCCACCTGCAGAGAAGAAAGGTGGTACCTAAC-TTTTTTTCTTGTCAGCATTTGGTAGGGGTGTTTTAT-----TGACCAAATATGTTCCCACAACCTAGT-TTTTTGTAACTAACTAAATATAGTAGATTTTTAA-ATTTTAT-------------CGTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19423 314 - 126596 GTTCACACTCCTTGGCTCTGCCATCATGCTGAAGATCGG--TTTAAAGGACTGGCTTCCCTCCCCCCAA--AATTGAAAGAGCACAGACTGAGAAACTGAATGTGGGAGACAGCAGTGGATTATGCTGTTCTCAGGGGTCACCT-CAGGTTTGGAAG--CATTC-TTTCAAATTAACCCATCTCAGGCCATCTGCAGAGAAGAAAGGTGGTACCTAAC-TTTTTTTCTTGTTAGCATTTGGTAGGGGTGTTTTAT-----TGACCAACTATGTTCCCACAACCTAGT-TTTTTGAT----ACTAAATATAGTAGATTTTTAA-ATTTTAT-------------CATC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55745423 318 + 99891981 GTCCACACTCCTTGGTTCTGCCATCATGCTGAAGATCGG--TTTAAAGGACTGGCTTCCCTCCCCCCAA--AATTAAAAGAGCACAAACTGAGAAACTGAATGTAAGAGACAGTAGTGAATTACGCTGTTCTCAGGGGTCACCT-CAGATTTGGAAG--CATTC-TTTCAAATTAACCCATCTCAGGCCATATGCAGAGAAGAAAGGTGGTACCTAAC-TTTTTTTCTTGTCAGCATTTGGTAGGGATGTTTTAT-----TGACCAAATATGTTCCCACAACCTAGT-TTTTTGTAACTAACTAAATATAGTAGATTTTTAA-ATTTTAT-------------CATC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442277 314 - 185818997 GTCCACACTCCTTGGCTCTGCCATCATGCTGAAGATCAG--TTTAAAGGACTGGCTTCCCTCCCCCCGA--AATTAAAAGAGCACAAACTGAGAAACTGAATGTAGGAGACAGCAGTGAACTATGCTGTTCTCAGGGGTCACCT-CAGGTTTGGAAG--CATTC--TTCAAATTAACCCATCTCAGGCTATCTGCAGAGAAGAAAGGTGGTACCTAAC-TTTTTTTTT--CCAGCATTTAGTAGGGGTGTTTTAT-----TAAACAAATATGGTCCCACAACCTAGT-TATTTGGAACTAACTAAATATAGTA-ATTTTTAA-ATTTCAT-------------TATC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67271911 314 + 192294377 GTCCACACTCCTTGGCTCTGCCATCATGCTGAAGATCAG--TTTAAAGGACTGGCTTCCCTCCCCCCGA--AATTAAAAGAGCACAAACTGAGAAACTGAATGTAGGAGACAGCAGTGAACTATGCTGTTCTCAGGGGTCACCT-CAGGTTTGGAAG--CATTC--TTCAAATTAACCCATCTCAGGCTATCTGCAGAGAAGAAAGGTGGTACCTACC-TTTTTTTTC--CCAGCATTTAGTAGGGGTGTTTTAT-----TAAACAAATATGGTCCCACAACCCAGT-TATTTGAAACTAACTAAATATAGTA-ATTTTTAA-ATTTCAT-------------CATC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2753963 314 + 3123512 GTCCACACTCCTTGGCTCTGCCATCATGCTGAAGATCAG--TTTAAAGGACTGGCTTCCCTCCCCCCGA--AATTAAAAGAGCACAAACTGAGAAACTGAATGTAGGAGACAGCAGTGAACTATGCTGTTCTCAGGGGTCACCT-CAGGTTTGGAAG--CATTC--TTCAAATTAACCCATCTCAGGCTATCTGCAGAGAAGAAAGGTGGTACCTAAC-TTTTTTTTT--CCAGCATTTAGTAGGGGTGTTTTAT-----TAAACAAATATGGTCCCACAACTTAGT-TATTTGGAACTAACTAAATATAGTA-ATTTTTAA-ATTTCAT-------------CATC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474235 315 + 10077455 GTCCACACCCCTTGGCTCTGCCATCTTGCTGAAGATCGG--TTTAAAGGACTGGCTTCCCTCCCCCCGA--AATTAAAAGAGCACAAACTGAGAAACTGAATGTAGGAGACAGCAGTGAACTACGCTCTTCTCAGGGGTCACCT-CAGGTTTGGAAG--CATTC--TTCAAATTAACCCATCTCAGGCCATCTGCAGAGAAGAAAGGTGGTACCTAACTTTTTTTTTT--TCAGCATTTAGTAGGGGTGTTTTAT-----TAAACAAATATGGTCCCACAACCTAGT-TATTTGGAACTAACTAAATATAGTA-ATTTTTAA-ATTTCAT-------------CATC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682245 314 + 127223203 GTCCACAGTCCTTGGCTCCGCCATCATGCTGAAGATCGG--TTTAAAGGACTGGCTTCCCTCCCCCCGA--AATTAAAAGAGCACAAACTGAGAAACTGAATGTTGGAGACAGCAGTGAACTACGCTGTTCTCAGGGGTCACCT-CCGGTTTGGAAG--CATTC--TTCAGATTAACCCATCTCAGGCCATCTGCAGAGAAGAAAGGTGGTGCCTAAC-TTTTTTTTT--TCAGCATTGAGTAGGGGTGTTTTAT-----TAAACAAATATGGTCCCACAACCTAGT-TATTTGGAACTAACTAAATATAGTA-ATTTTTAA-ATTTCAT-------------CAGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126443 314 - 1799296 GTCCACACCCCTTGGCTCTGCCATCATGCTGAAGATCGG--TTTAAAGGACTGGCTTCCCTCCCCCCGA--AACTAAAAGAGCACAAACTGAGAAACTGAATGTAGGAGACAGCAGTGAACCACGCTCTTCTCAGGGGTCACCT-CAGGTTTGGAAG--CATTC--TTCAAATTAACCCATCTCAGGCCATCTGCAGAGAAGAAAGGTGGTACCTAAC-TTTTTTTTT--TCAGCATTTAGTAGGGGTGTTTTAT-----TAAACAAATATGGTCCCACAACCTAGT-TATTTGGAACTAACTAAATATAGTA-ATTTTTAA-ATTTCAT-------------CATC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725154 315 + 6934359 GTCCACACTCCTTGGCTCTGCCATCATGCCGAAGATCGG--TTTCAAGGACTGGCTTCCCTCTCCCCGA--AATTAAAAGAGCACAAACTGAGAAACTGAATGTAGGAGACAGCAGTGAACTATGCTGTCCTCAGGGGTCACCT-CAGGTTTGGAAG--CATTC--TTCAAATTAACCCATCTCAGGCCATCTGCAGAGAAGAAAGGTGGTACCTAAC-TTTTTTTCT--CCGGTATTTAGTAGGGGTGTTTTAT-----TGACCAAATATGGTCCCACAACCTAGT-TATTTGGAACTAACTAAATATAGTAGATTTTTAA-ATTTTAT-------------CATC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108084042 312 - 128169293 GTCCACACTCACTGGATTTGCCATCATGCTGAAGATCAG--TTTAAAGGACTGGCTTCCCTCCCCAAGT--TATTAAAAGAACA-AAACTGAGAAACTGAATGTAGGAGACAGCAGTGAATTATCCTGTTCTCAGGGGTCACTT-GAGGTTTAGAAA--CATTC-TTCCAAATTAACCCATCTCAGGTCATCTGCAGAGAAGGAAGGTGCTATCTAAC-TTTTGTTTTTGTCAGCATTTGGTTGGGGTGTTCTGT-----TGACCAAATATGTTCCCAC-ACCTAGT-TTTTTGG----AACTAAGTATAGTAGACTTTGAA-ATTTTAT-------------CATC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 705278 279 - 18371965 GTCCACGCTCATTGGATTTGCCATCGTGCTGAAGATCGG--TTTAAAGGACTGGCTTCCCTCCCCAGGA--TATTACAAGAACA-AAACTGAGAAACCGAATGTAGGAGACAGCAGTGAATTATCCTGTTCTCAGGGGTCACTT-GAGGTTTAGAAA--CAGTC-TTCCACAT--------------------------------GGTG----CTAAC-TTTTGTTTTTATCAGCATTTGGTAGGGGTGTTCTG------TGACCAAATATGTTCCCAC-ACCTAGT-TTTTTGGAACTAACTAAATATAGTAGACTTTTAA-ATTTTAT-------------CACC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1365620 315 + 3566421 GTCCACACTCATTGGATTTGCCATCATGCTGAAGATCAG--TTTAAAGGACTGGCTTCCCTCCCCAAGA--TTTTAAAAGAATA-AAACTGAGAAACCAAATGTAGGACACAGCAGTGAATTGTTCTGTTCTCAGGGGTCACTT-GAGGTTGAGAAA--CATTC-TTCCAAATTAACCCATCTCAGGTCATCTGCAGAGAAGGAAGGTGCTATCTAAC-TTTTGTTTTTGTCAGCATTTGGTAGGGGTGTTCTG------TGACCAAATACGTTTCCAC-ACCTAGT-TTTTTGGAACTAACTAAATATAATAGACTTTTAA-ATTTTAA-------------AATC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1868199 314 - 9267652 ATCCACACTCATTGGATTTGCCATCTTGCTGAAGATCAG--TTTAAAGAACTGGCTTCCCTCCCCAAGA--TATTAAAAGAACA-AAACTGAGAAACCAAATGTAGGAGACAGCAGTGAATTATGCTGTTCTCAGGGGTCACTT-GAGGTTTAGAAA--CATTC-TTTCAAATTAACCCACCTCAGGTCATTTGCAGAGAAGGAAGGTGCTATCTAAC-TTTTGTTTTTGTCAGCATTTGGTAGGGGTGTTCTGT-----TGACCAAATATGTTCCCAC-ACTTAGT-TTTTTGGAACTAACTAAATATAGTAGACTT--AA-ATTTTAT-------------CATC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12696107 220 + 14340318 GTCTCCGTTTGTGGGCTC-ACCCTCCTGCTGAAGCTGGG--GTTTAA---------------------------------------------------------------CAGGGGTGGA-------------------------AAAGTTTGGAAA------------GCATTAGCAGATCCCAGGACATGTGTAGAGA-----GGGCGTGTTTAAG-TTTGCTTTT-GTTAGCATTTCGTAGGGGTGTTTTCT-----T---------TGATCACAG-TCAAAGA-ATTTTGGAAGTAACAAAATCTAATTGATTTTGAA-ATTTTATCTATAGCTTGGACCATC i otoGar3.GL873564 I 44 C 0 s canFam3.chr18 51738525 312 - 55844845 ATGCACA-----TGGCTCTG---------TGCACATGAGTCTTTAAAGGACTGGCTCCCTTTCCTCCAATGAATTAAAAGAACACAAATTGAG-AACTGAGTTTAGGAAACCAGAGTAAATTACTCTGTTCTCAGATGTCACTT-CAGTTTTAGAAAACAGGTC-TTTCAAATTAAGAGATTTCAGGGTAGCTGCAGAGAAGAAACAGGAAATCTAAG-ATTTGCATTTGTTAGCATTTAGTGAGGATGTTTGGTAGGAATCACTGAATATG-CCCCACAGCCTAGTATTTTTGAAGTTAATCAAGTCTAACAAATTTTAAATATTTTAT-------------C--- i canFam3.chr18 I 4 I 25 s dasNov3.JH578441 1138499 298 + 1446996 TTTTAAACAAATTGGCAAAGGCATCATGCTGCAGATTTG--TTTGAAA--------TCCCTCCCCAATA--TACTAAAAGAAAACAAATTGGG--------TTGAGGAGAAGGGTGCAAATTATGCTGTTCTCAGCAGTCACCTGCAAGTATAGAAA--GAATTGTTTCAAATGAATTTACTACAGGTAATTTTAAGACAAGGAATAGGATGTGTAAC-CTTGTTTTG--CTACTTTGTAG-AGGAGTGTTTTAT-----TGATAATGTGTGTTCCTACTGCCTGAA-TTTCTGGAAGTAATCAAATCTAAAAGATTTTAAA-ATTTTAC-------------C--- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998990 904 - 1121937 I a score=140799.000000 s hg38.chrUn_KI270749v1 41532 20 + 158759 ----------------AAAATCT-ATAGACAATTTTT s panTro5.chr1 101867807 20 - 228573443 ----------------AAAATCT-ATAGACAATTTTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497070 20 - 162613886 ----------------AAAATCT-ATAGACAATTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19737 20 - 126596 ----------------AAAGTCT-ATAGACAATTTTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55745741 20 + 99891981 ----------------AAAATCT-ACAGACAATTTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442591 19 - 185818997 ----------------AAAATCT-GTAGACAA-TTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272225 19 + 192294377 ----------------AAAATCT-GTAGACAA-TTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754277 19 + 3123512 ----------------AAAATCT-GTAGACAA-TTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474550 19 + 10077455 ----------------AAAATCT-GTAGACAA-TTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682559 19 + 127223203 ----------------AAAATCT-ATAGACAA-TTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126757 19 - 1799296 ----------------AAAATCT-GTAGACAA-TTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725469 19 + 6934359 ----------------AAAATCT-ATAGACAA-TTTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108084354 20 - 128169293 ----------------AAAATCT-ACAGACCACTGCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 705557 20 - 18371965 ----------------AAAATCT-ACAGACCACTGCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1365935 20 + 3566421 ----------------AAAATCT-ACAGACAATTGCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1868513 20 - 9267652 ----------------AAAATCT-ACAGACCACTGCT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12696327 21 + 14340318 ----------------AAAATCTCATAGACAGTATTT i otoGar3.GL873564 C 0 I 4361 s dasNov3.JH578441 1138797 32 + 1446996 TTGAATTGGGTCATGAAAAATAT----TACAATTTG- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998990 904 - 1121937 I e canFam3.chr18 51738837 25 - 55844845 I a score=307703.000000 s hg38.chrUn_KI270749v1 41552 33 + 158759 GATTAAAATAGACTCCA-TATCTATGTCCTGCTT s panTro5.chr1 101867827 33 - 228573443 TATTAAAATAGGCTCCA-CATCTATGTCCTGCTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497090 33 - 162613886 GATTAAAATAGACTCCA-CACCTATGTCCTGCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19757 33 - 126596 GATGAAAATAGACTCCA-TATCTATGTCCTGCTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55745761 33 + 99891981 TATTAAAATAGACTCCA-CACCTATGTCCTGCTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442610 32 - 185818997 GATTAAAATAGACTCCA-CACCTATGTCCTGC-T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272244 32 + 192294377 GATTAAAAAAGACTCCA-CACCTATGTCCTGC-T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754296 32 + 3123512 GATTAAAATAGACTCCA-CACCTATGCCCTGC-T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474569 32 + 10077455 GATTAAAATAGACTCCA-CACCTATGTCCTGC-T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682578 32 + 127223203 GATTAAAATAGACTCCA-CACCTATGTCCTGC-T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126776 32 - 1799296 GATTAAAATAGACTCCA-CACCTACGTCCTGC-T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725488 32 + 6934359 GATTAAAATAGACTCCA-CACCTATGTCCTGC-T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108084374 34 - 128169293 GATTAAAATAGACTGTATTACCTATGTCCTGCTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 705577 33 - 18371965 GATTAAAATAGACTCCA-CACCTATGTCCTGCTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1365955 33 + 3566421 GATTAAAATAGACTCCA-CACCTATGTCCTGCTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1868533 33 - 9267652 GATTAAAATAGACTCCA-AACCTATGTCCTGCTT i aotNan1.NW_018514471v1 C 0 C 0 s dasNov3.JH578441 1138829 30 + 1446996 GATTAAAATAAATGCCA-CATCTCCATCCCT--- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 998990 904 - 1121937 I e otoGar3.GL873564 12696348 4361 + 14340318 I e canFam3.chr18 51738837 25 - 55844845 I a score=32385.000000 s hg38.chrUn_KI270749v1 41585 3 + 158759 TTC s panTro5.chr1 101867860 3 - 228573443 TTC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497123 3 - 162613886 TTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19790 3 - 126596 TTC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55745794 3 + 99891981 TTC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442642 3 - 185818997 TTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272276 3 + 192294377 TTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754328 3 + 3123512 TTC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474601 3 + 10077455 TTC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682610 3 + 127223203 TTC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126808 3 - 1799296 TTC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725520 3 + 6934359 TTC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108084408 3 - 128169293 TTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 705610 3 - 18371965 TTC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1365988 3 + 3566421 TTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1868566 3 - 9267652 TTC i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 999894 3 - 1121937 tta i tarSyr2.KE946558v1 I 904 I 1299 s dasNov3.JH578441 1138859 3 + 1446996 AGC i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e otoGar3.GL873564 12696348 4361 + 14340318 I e canFam3.chr18 51738837 25 - 55844845 I a score=1064557.000000 s hg38.chrUn_KI270749v1 41588 118 + 158759 TTCTTATTATTAATTACATTGCTGTATCAAAGAACAAGACTTCAGAATCAAGAATATCTTGTCTCTTCGCATTGAATTT-ATATACAAGGTGCTCTTTCTTTAATGCTGTCTC----AAAGGA s panTro5.chr1 101867863 113 - 228573443 TTC---TTATTAATTACATTGCTGTATAAAAGAACAAGACTTCAGAATCAAGAATATCTTGTCTGTTGGCATTGAATT---TATACAAGGTGCTCTTTCTTTAATGCTGTCTC----AAAGGA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497126 116 - 162613886 TTCTTATTATTAATTACATTGCTGTATAAAAGAACAAGACTTCAGAATCAAGAATATCTTGTCTCTTGGCATTGAATT---CATACAAGGTGCTCTTTCTTTAATGCTGTCTC----AAAGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19793 116 - 126596 TTCTTATTATTAATTACATTGCTGTATAAAAGAACAAGACTTCAGAATCAAGAATATCTTGTCTCTTTGCATTGAATT---TATACAAGGTGCTCTTTCTTTAATGCTGTCTC----AAAGAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55745797 116 + 99891981 TTCTTATTATTAATTACATTGCTGTATAAAAGAACAAGACTTCAGAATCAAGAATATATTGTCTCTTGGCATTGAATT---CATACAAGATGCTCTTTCTTTAATGCTGTCTC----AAAGGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442645 116 - 185818997 TTCTTATTATTAATTACATTGCTGTATGAAATAACAAAACTTCAGAATCAAGAATATCTTGTCTCTTGGCATTGAATT---CATACAAGGTGCTCTTTCTTTAACGCTGTTTC----AGAGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272279 116 + 192294377 TTCTTATTATTAATTACATTGCTGTATGAAATAACAAAACTTCAGAATCAAGAATATCTTGTCTCTTGGCATTGAATT---CATACAAGGTGCTCTTTCTTTAACGCTGTTTC----AGAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754331 116 + 3123512 TTCTTATTATTAATTACATTGCTGTATGAAATAACAAAACTTCAGAATCAAGAATATCTTGTCTCTTGGCATTGAATT---CATACAAGGTGCTCTTTCTTTAACGCTATTTC----AGAGGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474604 116 + 10077455 TTCTTATTATTAATTACATTGCTGTATGAAATAACAAAACTTCAGAATCAAGAACATCTTGTCTCTTGGCATTGAATT---CATACAAGGTGCTCTTTCTTTAACGCTGTTTC----AGAGGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682613 113 + 127223203 TTC---TTATTAATTACATTGCTGTATGAAATAACAAAACTTCAGAATCAAGAATATCTTGTCTCTTGGCATTGAATT---CATACAAGGTGCTCTTTCTTTAACGCTGTTTC----AGAGGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126811 116 - 1799296 TTCTTATTATTAATTACATTGCTGTATGAAATAACAAAACTTCAGAATCAAGAATATCTTGTCTCTTGGCATTGAATT---CATACAAGGTGCTCTTTCTTTAATGCTGTTTC----AGAAGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725523 116 + 6934359 TTCTTATGATTAATTACATTGCTGTATAAAATAACAAAACTTCAGAATCAAGAACATCTTGTCTCTTGGCATTGAATT---CATACAAGGTGCTCTTTCTTTAACGCTGTTTC----AGAGGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108084411 109 - 128169293 TTTTT-------ATTACTTTGCTGTATAAAACTACAAAACTTCAGAATCAAGAAGATCTTGTCTCTTGGTATTGAATT---CATACAAGCTGCTCTACCTGCAATGCCGTCTC----AAAGGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 705613 113 - 18371965 TTTTT-------ATTGCATTGCTGTATAAAACTACAAAACTTCAGAATCAAGAATAGCTTGTCTCTTGGTTTTCAATT---CATACAAGGTGCTCTTTCTACAATGCTGTCTCAAATAAAGGA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1365991 113 + 3566421 TTTTT-------ATTACATTGCTGTATAAAACTACAAAACTTCAGAATCAAGAATGTCTTGTCTCTTGGCATTGAATT---CATACAAGGTGCTCTTTCTGCAATGCTGTCTCAAACAAAGGA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1868569 113 - 9267652 TTTTT-------ATTACATTGCTGTATAAAACTACAAAACTTCAGAATCAAGAATATCTTGTCTCTTGGTATTGAATT---CATACAAGGTGCTCTTTCTACAATGCTGTCTCAAACAAAGGA i aotNan1.NW_018514471v1 C 0 C 0 s dasNov3.JH578441 1138862 116 + 1446996 TTTAAAAAATATATTGTATTGCTTAATTAA--TATAAAACTTCAGAATCAA-AATGCCTAGGCTATAGGCACTTAATTTAATATTTGAAAGTCTTTTCTTAAAAGACTTTCTC----AAAGCA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66725099 3411 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12696348 4361 + 14340318 I e canFam3.chr18 51738837 25 - 55844845 I a score=472330.000000 s hg38.chrUn_KI270749v1 41706 41 + 158759 CATATTTTTACTCATTAAAAAGGA---AGATCGGAATCTAGTTG s panTro5.chr1 101867976 41 - 228573443 CATATTTTTACTCATTAAAAAGGA---ATATCGGAATCTAGTTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497242 41 - 162613886 CATATTTTTACTCATTAAAAAGGA---AGATCGGAATCTAGTTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19909 41 - 126596 CATATTTTTACTCATTAAAAAGGA---AGATCGGAATCTAGTTG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66728510 41 - 72422247 CATATTTTTACTCATTAAAAAGGA---AGATCGGAATCTAGTTG i ponAbe2.chrUn I 3411 C 0 s nomLeu3.chr17 55745913 41 + 99891981 CATATTTTTACCCATTAAAAAGGA---AGATTGGAATCTCGTTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442761 41 - 185818997 CATATTTTTACTCATTAAATAGGA---GGGTCAGAATCTAGTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272395 41 + 192294377 CATATTTTTACTCATTAAATAGGA---GGGTCAGAATCTAGTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754447 41 + 3123512 CATATTTTTACTCATTAAATAGGA---GGGTCAGAATCTAGTTG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474720 41 + 10077455 CATATTTTTACTCATTAAATAGGA---GGGTCAGAATCTAGTTG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682726 41 + 127223203 CATATTTTTACTCATTAAATAGGA---GGGTCAGAATCTAGTTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126927 41 - 1799296 CATATTTTTACTCATTAAATAGGA---GGGTCAGAATCTAGTTG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725639 41 + 6934359 CCTATTTTTACTCATTAAATAGGA---GGGTCAGAATCTAGTTG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108084520 41 - 128169293 CATATTTTGACTCATTAAATAGGA---GGATCAGAATCTAGTTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 705726 41 - 18371965 CATATTTTGACTCATTAAATAGGA---GGATCAGAATCTAGCTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1366104 41 + 3566421 CATATTTTGACTCATTAAATAGGA---GGATCAGAATCTAGTTG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1868682 41 - 9267652 CATATTTTGACTCATTAAATAGGA---GGAACAGAATCTAGTTG i aotNan1.NW_018514471v1 C 0 C 0 s dasNov3.JH578441 1138978 44 + 1446996 AGGACTTTTCCCCCTCATATATGAGAGGGGTCAGAATTTAGTTG i dasNov3.JH578441 C 0 I 28 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12696348 4361 + 14340318 I e canFam3.chr18 51738837 25 - 55844845 I a score=304647.000000 s hg38.chrUn_KI270749v1 41747 27 + 158759 TATGCACTGCTCCAACATATTAATAAT s panTro5.chr1 101868017 27 - 228573443 TATGCGCTGCTCCAACATATTAATAAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497283 27 - 162613886 TATGCAGTGCTCCAACATATTAATAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19950 27 - 126596 TATGCACTGGTCCAACGTATTAATAAT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66728551 27 - 72422247 TATGCACTGCTCCGACATATTAATAAT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 55745954 27 + 99891981 TACGCACTGCTCCAACATATTAATAAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442802 27 - 185818997 TATGCACTGCTTCAACATACTAATAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272436 27 + 192294377 TATGCACTGCTTCAACATACTAATAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754488 27 + 3123512 TATGCACTGCTTCAACATACTAATAAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474761 27 + 10077455 TATGCACTGCTTCAACGTACTAATAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682767 26 + 127223203 TATGCACTGCTTCAACATAC-AATAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126968 27 - 1799296 TATGCACTGCTTCAACATACTAATAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725680 27 + 6934359 TATGCACTGCTTCGACATATTAATAAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108084561 24 - 128169293 TATGCCCTGCTCCAATATATTAAC--- i calJac3.chr8 C 0 I 415 s saiBol1.JH378145 705767 27 - 18371965 TATGCCCTGCTTCAACATATTAATAAC i saiBol1.JH378145 C 0 I 390 s cebCap1.NW_016107540v1 1366145 27 + 3566421 TATGCCCCACTCCAACATATTAATAAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1868723 27 - 9267652 TATGTCCTGCTCCAACATATTAATAAC i aotNan1.NW_018514471v1 C 0 I 421 s otoGar3.GL873564 12700709 27 + 14340318 TACACACTTCTCCAACACAAGAATATT i otoGar3.GL873564 I 4361 C 0 s dasNov3.JH578441 1139050 27 + 1446996 TATGCATCACTCCAACGTAATAATAAT i dasNov3.JH578441 I 28 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e canFam3.chr18 51738837 25 - 55844845 I a score=207241.000000 s hg38.chrUn_KI270749v1 41774 16 + 158759 TAAAATTAGGAGGTAA s panTro5.chr1 101868044 16 - 228573443 TAAAATTAGGATGTAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497310 16 - 162613886 TAAAATTAGGAGGTAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19977 16 - 126596 TAAAATTAGGAGGTAA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66728578 16 - 72422247 TAAAATTAGGAGGTAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 55745981 16 + 99891981 TAAAATTAGGAGATAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442829 16 - 185818997 TAAAATTAGGAGATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272463 16 + 192294377 TAAAATTAGGAGATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754515 16 + 3123512 AAAAATTAGGAGATAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474788 16 + 10077455 TAAAATTAGGAGATAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682793 16 + 127223203 TAAAATTAGGAGATAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1126995 16 - 1799296 TAAAATTAGGAGATAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725707 16 + 6934359 TAAAATTAGGAGATAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108085000 16 - 128169293 taaaatTAGGAGGTAA i calJac3.chr8 I 415 C 0 s saiBol1.JH378145 706184 16 - 18371965 taaaattaaGAGGCAA i saiBol1.JH378145 I 390 C 0 s cebCap1.NW_016107540v1 1366172 16 + 3566421 TAAAATTAGGAGATAA i cebCap1.NW_016107540v1 C 0 I 418 s aotNan1.NW_018514471v1 1869171 16 - 9267652 TAAAATTAGGAGGTAA i aotNan1.NW_018514471v1 I 421 C 0 s otoGar3.GL873564 12700736 16 + 14340318 TAAAAGCAACAGGCAA i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1139077 16 + 1446996 TAAAGGTAAAAGGTAA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e canFam3.chr18 51738837 25 - 55844845 I a score=51816.000000 s hg38.chrUn_KI270749v1 41790 5 + 158759 ATGTG s panTro5.chr1 101868060 5 - 228573443 ATGTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497326 5 - 162613886 ATGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19993 5 - 126596 ATGTG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66728594 5 - 72422247 ATGTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 55745997 5 + 99891981 ATGTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442845 5 - 185818997 ATGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272479 5 + 192294377 ATGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754531 5 + 3123512 ATGTG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474804 5 + 10077455 ATGTG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682809 5 + 127223203 ATGTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127011 5 - 1799296 ATGTG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725723 5 + 6934359 ATGTG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108085016 5 - 128169293 ATATG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 706200 5 - 18371965 ATATA i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1869187 5 - 9267652 ATATG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12700752 5 + 14340318 ATGTG i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1139093 3 + 1446996 ATA-- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e cebCap1.NW_016107540v1 1366188 418 + 3566421 I e canFam3.chr18 51738837 25 - 55844845 I a score=717717.000000 s hg38.chrUn_KI270749v1 41795 61 + 158759 GTCAAAGCCATAGAA-----AGAC-TGAGATGTCATTTATATTGATTACTCTATAGCACTCT-ACAAA s panTro5.chr1 101868065 62 - 228573443 GTCAAAGCTATAGAA-----AGACTTGGGATGTCATTTATATTGATTACTGTATAACACTGT-ATAAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497331 62 - 162613886 GTTAAAGCCATAGAA-----AGACTTGAGATGTCATCTATATTGATTACTGTATAGCACTCT-ACAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 19998 61 - 126596 GTCAAAGCTATAGAA-----AGAC-TGAGATGTCATTTATATTGATTACTGTATAGCACTCT-ACAAA i gorGor5.CYUI01000522v1 C 0 I 1540 s ponAbe2.chrUn 66728599 62 - 72422247 GTCAAAGCTATAGAA-----AGACTTGAGATGTCATTTATATTGATTACTGTATAGCACTCT-ACAAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 55746002 62 + 99891981 GTCAAAGCTATAGAA-----AGACTTGAGATGTCATCTATAATGATTACTGTATAGCACTCT-ACAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442850 62 - 185818997 GTTAAAGCTATAGAA-----AGACTTGAGATGTCATCTATAATGATTACTGTATGGCACTCT-ACAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272484 62 + 192294377 GTTAGAGCTATAGAA-----AGACTTGAGATGTCATCTATAATGATTACTGTATGGCACTCT-ACAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754536 62 + 3123512 GTTAAAGCTATAGAA-----AGACTTGAGATGTCATCTATAATGATTACTGTATGGCACTCT-ACAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474809 62 + 10077455 GTTAAAGCTATATAA-----AGACTTGAGATGTCATCTATAATGATTACTGTATGGCACTCT-ACAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682814 62 + 127223203 GGTAAAGCTATAAAA-----AGACTTGAGATGTCATCTATAATGATTACTGTATGGCACTCT-ACAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127016 62 - 1799296 GTTAAAGCTATAAAA-----AGACTTGAGATGTCATCTATAATGATTACTGTATGGCACTCT-ACAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725728 62 + 6934359 GTTAAAGCTATAGAA-----AGACTTGAGATGTCATCTATAGTGATTACTGTATAGCACTCT-ACAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108085021 62 - 128169293 CTCAAAGCTATAGAA-----AGACTTGAGATGTCATCTATATTGTTGACTGTATAAAATTCT-ACAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 706205 62 - 18371965 GTGAAAGCTATAGAA-----AGACTTGAGATGTCATCTATATTGTTGACTGTATAACACTCT-ATAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1366606 62 + 3566421 GTCAAAGCTATAGAA-----AGACTTGAGATGTCATCTATATTGTTGACTATATAACAATCT-ACAAA i cebCap1.NW_016107540v1 I 418 C 0 s aotNan1.NW_018514471v1 1869192 62 - 9267652 GTCAAAGCTATAGAA-----AGACTTGAGATGTCATCTATGTTGTTGACTGTATAACACTCT-ACAAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12700757 61 + 14340318 GCTATAGGT-TAGAG-----AGACTTGAGATCCCACCTATATTAAAGACTACATGGCATTCT-ATAAA i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1139096 68 + 1446996 GTAAAAGCTATAGAATATACAAATAAAGGATACCACTTTTATTGAAAATATAGTAGCAATTTCATAAA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e canFam3.chr18 51738837 25 - 55844845 I a score=11012.000000 s hg38.chrUn_KI270749v1 41856 1 + 158759 C s panTro5.chr1 101868127 1 - 228573443 C i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497393 1 - 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 21599 1 - 126596 c i gorGor5.CYUI01000522v1 I 1540 C 0 s ponAbe2.chrUn 66728661 1 - 72422247 C i ponAbe2.chrUn C 0 I 7598 s nomLeu3.chr17 55746064 1 + 99891981 C i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442912 1 - 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272546 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754598 1 + 3123512 C i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474871 1 + 10077455 C i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682876 1 + 127223203 C i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127078 1 - 1799296 C i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725790 1 + 6934359 C i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108085083 1 - 128169293 C i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 706267 1 - 18371965 C i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1366668 1 + 3566421 C i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1869254 1 - 9267652 C i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12700818 1 + 14340318 T i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1139164 1 + 1446996 C i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e canFam3.chr18 51738837 25 - 55844845 I a score=1175121.000000 s hg38.chrUn_KI270749v1 41857 113 + 158759 AGAAATTGTTAAATAATAG-TTTATATAAATATTTTGTAGCATTTCAAATATTTGAGTGCTTGAAGTTTCTCCTCTTATATAGTTCAGATTATCAATTTGAAGACTTACTCCGC s panTro5.chr1 101868128 113 - 228573443 AGAAATTGTGAAATAATAG-TTTATATAAATATTTTGTAGCATTTCAAATATTGGAGTGCCTGAAGTTTCTCCTCTTATATAGTTCAGATTATCAATTTGAAGTCTTACTCCGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497394 113 - 162613886 AGAAATTGTTAAATAATAA-TTTATGTAAATATTTTATAGCATTTCAAATATTTTAGTGACTGAAATTTCTCCTCTTATATAGTTCAGATTATCAATTTGAAGACTTACTCCAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 21600 112 - 126596 agaaatTGTTAAATAATAG-TTTACA-AAGTATTTTGTAGCATTTCAAATATTTGAGTGCTTGAAGTTTCTCCTCTTATATAGTTCAGATTATCAATTTGAAGACTTACTCCAC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746065 111 + 99891981 AGAAACAGTTAAAAAATAG-TTTATATAAATATTTTATAGCATTTCAAATATTTTAGTGCCTGAAGTTTCTCCTC--ATATAGTTCAGATTATCAATTTGAAGACTTACTCCAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133442913 113 - 185818997 AGAAATGGTTAAATAATAG-TTTATATAAATATTTTGTAGCATTTCAAATATTTTAGTGACTGAAGTTTCTCCTCTTATATAGTTCAGATTGTCAATTTTAAGACTTATTCCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272547 113 + 192294377 AGAAATGGTTAAATAATAG-TTTATATAAATATTTTGTAGCATTTCAAATATTTTAGTGCCTGAAGTTTCTCCTCTTATATAGTTCAGATTGTCAATTTTAAGACTTATTCCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754599 113 + 3123512 AGAAATGGTTAAATAATAG-TTTATATAAATATTTTGTAGGATTTCAAATATTTTAGTGCCTGAAGTTTCTCCTCTTATATAGTTCAGATTGTCAATTTTAAGACTTATTCCAC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474872 113 + 10077455 AGAAATGGTTAAATAATAG-TTTATATAAATATTTTGTAGCATTTCAAATATTTTAGTGCCTGAAGTTTCTCCTCTTATATAGTTCAGATTGTCAATTTTACGACTTATTCCAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682877 113 + 127223203 AGAAATGGTTAAATAATAG-TTTATATAAATATTTTGTAGCATTTCAAATATTTTAGTGCCTGAAGTTTCTCCTCTTATATAGTTCAGATTGTCAATTTTAAAACTTATTCCAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127079 113 - 1799296 AGAAATGGTTAAATAATAG-TTTATATAAATATTTTGTAGCATTTCAAATATTTTAGTGCCTGAAGTTTCTCCTCTTATATAGTTCAGATTGTCAATTTTACGACTTATTCCAC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725791 112 + 6934359 AGACATGGTTAAATAATAG-TTTATATAAATATTTTGTAGCATTTCAAATATTTT-GTGCCTGAAGTTTCTCCTCTTATATAGTTCAGATTATCAATTTTAACACTTATTCCAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108085084 112 - 128169293 AGAAATGGTTAAATAATAG-TTTATACAACTATTTTGTGGCATTTCAAATATTTTAGTGCAT-AAGTTTCTTCTCTTACATAGTTCAGATTATGAATTTGAATACTTACTTCAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 706268 113 - 18371965 AGAAATGGTTAAATAATAG-TTTATACAACTATTTTGCAGCATTTCAAATATATTAGTGCCTGAAGTTTCTTCTCTTACATAGTTCGGATTATCAATTTGAATACTTACTTCAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1366669 112 + 3566421 AGAAATGGTTAAATAATTG-TTTATAAAACTATTTTGTAGCATTTCGAATAT-TTAGTACCTGAAGTTTCTTCTCTTACATAGTTCAGATTATCAATTTGAATACCTACTTCAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1869255 113 - 9267652 AGAAATGGTTAAATAATAG-TTTATACAACTATTTTGTAGCATTTCAAATATTTTAGTGCCTGAAGTTTCTTCTCTTACATAGTTCAGATTATCAATTTGAATATTTACTTCAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12700819 110 + 14340318 TGAAATCATTAGATAATGGATTTATGTAAATATTTTATGGAGTTTGAAATATTTGAGTTCCTATAGTTTGATGTCT----TAGTTTAGATAATCAATTTGAAGACTTACTCTAC i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1139165 108 + 1446996 AGaaattattacataat---tttatgtaaatatttaaaatCACTTTGA--AATTGAGTAC-TGAATTTTGTTTCTTTAAATAATTAAGAAATTTAATTTGAACACTTGTTCAAC i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e canFam3.chr18 51738837 25 - 55844845 I a score=200963.000000 s hg38.chrUn_KI270749v1 41970 20 + 158759 TAGTTAATATG-T----TTTT--AGTC s panTro5.chr1 101868241 20 - 228573443 TGGTTAAAAAG-T----TTTT--AGTC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497507 20 - 162613886 TAGTTAATATG-T----TTTT--CGTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 21712 20 - 126596 TAGTTAATATG-C----TTTT--AGTC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746176 20 + 99891981 TAGTTAATATG-T----TTTT--AGTC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443026 20 - 185818997 TAGTTAATACG-T----TTTT--AGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272660 20 + 192294377 TACTTAATACG-T----TTTT--AGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754712 20 + 3123512 TAGTTAATACG-T----TTTT--AGTC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2474985 20 + 10077455 TAGTTAATATG-T----TTTT--AGTC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5682990 20 + 127223203 TAGTTAATATG-T----TTTT--AGTC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127192 20 - 1799296 TAGTTAATATG-T----TTTT--AGTC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725903 20 + 6934359 TAATTAATATG-T----TTTT--AGTC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108085196 20 - 128169293 TAGTTAATATG-T----TTTT--AGTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 706381 21 - 18371965 TAGTTAATATGTT----TTTT--AGTC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1366781 21 + 3566421 TAGTTAGTATGTT----TTTT--AGTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1869368 21 - 9267652 TAGTTAATGTGTT----TTTT--AGTC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12700929 24 + 14340318 TCATTAATTTT-TGTTATTTC--AGTC i otoGar3.GL873564 C 0 I 10 s canFam3.chr18 51738862 20 - 55844845 TAGTTACTTTG-T----TTTA--GGTC i canFam3.chr18 I 25 C 0 s dasNov3.JH578441 1139273 19 + 1446996 ---TGAATTTC-T----TTTTCAAGTC i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I a score=1374476.000000 s hg38.chrUn_KI270749v1 41990 142 + 158759 -TCG-TTTGAGTATTACATAAAAGCAATTTTCAGT------TAAATGTGTTCCGCTTACATAAAACATTACAAATTATTGAGGATTTAATTACTTATTCATGTTCCTGTAATGTCTTTAGAAGATTTTCTTC-TTATTACCTATCAATATA s panTro5.chr1 101868261 142 - 228573443 -TCT-TTTGAGTATTATATAAAAGCAATTTTCAGC------TAAATGTGTTCTGCTTACATAAAACATTAGAAATTAGTTAGTATTTAATAACATTTTCGTGTTCCTGTAATGCCTTTAGAAGATTTTCATA-TTATTACCTATCAATATA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497527 141 - 162613886 -TCG-TTCGAATATTATATAAAAACAATTTTCAGT------TAAATGTGTTCTGGTTACAT-AAACGTTACAAATTAGTGAGTATTTAATTACATTTTCATGTTCCTGTAATGTCTTTAGAATATTTTCATA-TTATTACCTATCAATATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 21732 142 - 126596 -TCG-TTTGAGTATTATATAAAAGCAATTTTCAGT------TAAATGTGTTCTGCTTACATAAAACATTACAAATTATTGAGGATTTAACTACTTATTCATGTTCCTGTAATGTCTTTAGAAGATTTTCTTA-TTATTACCTATCAATATA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746196 142 + 99891981 -TCA-TTTGAATATTATATAAAAACAATTTTCAGT------TAAATGTGTTCTGGTTACATAAAACAGTACAAATTAGTGAGTATTTAATTACATTTTCATATTCCTGTAATGTCTTTAGAAGATTTTCATA-TTATTACCTATCAATATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443046 138 - 185818997 -TCG-TTTGAATACTACATAAAAGTAATTTTCAGT------TAAATGTGTTCTTGTTACATAAAACATTACAAATTAGTGAG----TAGTTACATTTTCATGTTCCTGTAATGTCTTTAGAAGATTTTCATA-TTATTACCTATCACTATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272680 138 + 192294377 -TCG-TTTGAATACTACATAAAAGTAATTTTCAGT------TAAATGTGTTCTTGTTACATAAAACATTACAAATTAGTGAG----TAGTTACATTTTCATGTTCCTGTAATGTCTTTAGAAGATTTTCATA-TTATTACCTATCACTATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754732 138 + 3123512 -TCG-TTTGAATACTACATAAAAGTAATTTTCAGT------TAAATGTGTTCTTGTTACATAAAACATTACAAATTAGTGAG----TAGTTACATTTTCATGTTCCTGTAATGTCTTTAGAAGATTTTCATA-TTATTACCTATCACTATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475005 138 + 10077455 -TCG-TTTGAATACTACATAAAAGTAATTTTCAGT------TAAATGTGTTCTTGTTACATAAAACATTACAAATTAGTGAG----TAGTTACATTTTCATGTTCCTGTAATGTCTTTAGAAGATTTTCATA-TTATTACCTATCAATATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683010 142 + 127223203 -TCG-TTTGAATACTACATAAAAGTGATTTTCAGT------TAAATGTGTTCTTGTTACATAAAACATTACAAATTAGTGAGTATTTAGTTACCTTTTCATGTTCCTGTAATGTCTTTAGAAGATTTTCATA-TTATTACCTATCAATATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127212 138 - 1799296 -TCG-TTTGAATACTACATAAAAGTAATTTTCAGT------TAAATGTGTTCTTGTTACATAAAACATTACAAATTAGTGAG----TAGTTACATTTTCATGTTCCTGTAATGTCTTTAGAAGATTTTCATA-TTATTACCTATCAATATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1725923 142 + 6934359 -TCA-TTTGAATACTATATAAAAGTAATTTTCAGT------TAAATGTGTGCTTGTTACATAAAACATTACAAATTAGTGAGTATTTAGTTACATTTTCATGTTCCTGTAATGTCTTTAGAAGATTTTCATA-TGATTACCTATCAATATA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108085216 144 - 128169293 -TCATTTTGAACATTATATAAAAGTAATTTTCAGT------TAAATGTGTCCTCATTATATAAAGCTTTGCAAATTAGTGAAAATTTAATTTTATCTTCATGTTCCCGTAATGTCTTCAAAAGATTTTTACATTTATTACCTATCAATACA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 706402 143 - 18371965 -TTATTTTGAACATTATATAAAAGTAATTTTCAGT------TAAATGTGTCCTCATTATATAAAGCATTACAAATTAGTGAACATTTAATTATATTTTCATGTTCCTGTAATGTCTTCAAAAGATTTTTATA-TTATTACCTATCAACATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1366802 137 + 3566421 -TCATTTTGAACATTAT------GTAATTTTCAGT------TAAATGTGTCCTCATTATATAAAGCATTACAAATTAGTGAACATTTAATTATATTTTCATATTCCTGTAATGTCTTCAAAAGATTTTTATA-TTACTATCTATCAATATG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1869389 143 - 9267652 -TCATTTTGAACATTATATAAAAGTAATTTTCAGT------TAAATGTATCCTCATTATATAAAGCATTACAAATTAGTGAACATTTAATTATATTTTCATGTTCCTGTAATGTCTTCAAAAGATTTTTATA-TTATTACCTATCAATATG i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51738882 123 - 55844845 -TCATTTTGAATATAACCTAAGTA-AATATCCAGT------TAGAAGTATCCTTCTTGTACTAA-----AAAAATTAGTGAATGTTTAATGACATTGTTATGTGCCTGTAAAATTTTCAAAAGATTTGCATA-TTAC-------------- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1139292 148 + 1446996 TCCT-TTTGAACATAATAAAAAAGTGATTTTCAGTTATTAATAAATATCTCCTTGTTATGCAAAACATTACAAATTAGTGAATATATGAAGACATTTTAATGCATAGGTAAAAATTTTACAGCAATT-CAGA-TTATTACCTATCAGTATA i dasNov3.JH578441 C 0 I 304 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I a score=398460.000000 s hg38.chrUn_KI270749v1 42132 47 + 158759 TGTATGCTTTTTCAAAGAAAAATCAAACATATATATCATTGAAATTG s panTro5.chr1 101868403 47 - 228573443 TGTATGCTTTGTCTAAGAAAAATCAATCATATACATCATTGAAATTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497668 47 - 162613886 TGTATGCTTTGTCAAAGAAAAATCAAACATATATATCATTGAAATTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 21874 47 - 126596 TGTATGCTTTGTCAAAGAAAAATCAAACATGTATATCATGGAAATTG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746338 47 + 99891981 TGTATGCTTTGTCAACGAAAAATCAAACATATATATCATTGAAATTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443184 47 - 185818997 TGTATGCTTTGTCAAAGACAAACCAAACATATATATCATTTACATTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272818 47 + 192294377 TGTATGCTTTGTCAAAGACAAACCAAACATATATATCATTTACATTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754870 47 + 3123512 GGTATGCTTTGTCAAAGACAAACCAAACATATATATCATTTACATTG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475143 47 + 10077455 TGTATGCTTTGTCAAAGACAAACCAAACACATATATCATTTACATTG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683152 47 + 127223203 TGTATGCTTTGTCAAAGACAAACCAAACACATGTATCATTTACATTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127350 47 - 1799296 TGTATGCTTTGTCAAAGACAAACCAAACACATATATCATTTACATGG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726065 47 + 6934359 TGTATGCTTTGTCAAAGAAAAACCAAACACATATATCATTTAAATTG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108085360 41 - 128169293 T------TTTCTCAAAGAAAAACCAAACACATATATCATTTAAATTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 706545 41 - 18371965 T------TTTGTCAAAGAAAAACCAAACACATATATCATTTAAATTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1366939 41 + 3566421 T------TTTGTCAAAGAAAAAACAAACACATATATCATTTAAATTG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1869532 40 - 9267652 -------TTTGTCAAAGAAAAACCAAACACATATATCATTTAAATTG i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51739005 37 - 55844845 ---ATGTTTCATCAACAACAAAAAAA-------CACCACTTAAATTG i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I e dasNov3.JH578441 1139440 304 + 1446996 I a score=1346323.000000 s hg38.chrUn_KI270749v1 42179 149 + 158759 AAACTTTTTA---AAAGTACTTA-----------------------------------------------------------------------------TTAAT---TCTATTG----AAAAACCACATCCATAGGAACA-ATTACAATATAATA---------------TTGTGAACATGT-AA---ACATATACCC--TGTCTATTT-TATGTATAATCATATATGATTAAA-AATATAGTTAAGAATTTTTAAACC s panTro5.chr1 101868450 151 - 228573443 AAACTTTTTA---AAAGTACTTA-----------------------------------------------------------------------------TTAAT---TCTATTG----AAAAACCACATCCATAGGAGCA-AATACAATATAATA---------------TTGTGAACATGT-AA---ATATATATCCTATGTCTATTT-TATATATAAGCATATGTGATTAAA-AATATAGTTAAGAATTTTTAAACC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497715 148 - 162613886 AAAAATTTTA---AAAGTACTTA-----------------------------------------------------------------------------TTAAT---TCTATTG----AAAAACCACATCCATAGGAACA-ATTACAGTATAATA---------------TTGTGAACATGT-AA---ATATATATCCTATGTCTATTT-TATATATAAGCATATATGATTAAA-GGTATAGTT---AATTTTTAAGCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 21921 151 - 126596 AAACTTTTTA---AAAGTACTTA-----------------------------------------------------------------------------TTAAT---TCTATTG----AAAAACCACATCCATAGGAACA-ATTACAATATAATA---------------TTGTGAACATGT-AA---ACATATACCCTATGTCTATTT-TATGTATAAGCATATATGATTAAA-AATATAGTAAATAATTTTTAAACC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746385 151 + 99891981 AAAATTTTTA---AAAGTACTTA-----------------------------------------------------------------------------TTAAT---TCTATTG----AAAAACCACATCCATAGGAACA-ATtataatataata---------------ttgtgaacaggt-aa---atatatatcctatgtctattt-tatatataagcatatatgattaaa-aatataGTTAAGAATTTTTAAGCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443231 151 - 185818997 AAAATATTTA---AAAGTACTTA-----------------------------------------------------------------------------TGAAT---TTTATTT----GAAAACCACATCCATAGGAACA-AATACAATATACTA---------------GTGTGAACATGT-AA---ATATATATCCTATGTCTATTT-TACATATAAGCATATATGATCAAA-AATATAGTCAAGAATTTTTAAATC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67272865 151 + 192294377 AAAATATTTA---AAAGTACTTA-----------------------------------------------------------------------------TGAAT---TTTATTT----GAAAACCACATCCATAGGAACA-AATACACTATACTA---------------GTGTGAACATGT-AA---ATATATATCCTATGTCTATTT-TACATATAAGCATATATGATCAAA-AATATAGTAAAGAATTTTTAAATC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2754917 151 + 3123512 AAAATATTTA---AAAGTACTTA-----------------------------------------------------------------------------TGAAT---TTTATTT----GAAAACCACATCCATAGGAACA-AATACAATATACTA---------------GTGTGAACATGT-AA---ATATATATCCTATGTCTATTT-TACATATAAGCATATATGATCAAA-AATATAGTCAAGAATTTTTAAATC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475190 151 + 10077455 AAAATATTTA---AAAGTACTTA-----------------------------------------------------------------------------TGAAT---TTTATTT----GAAAACCACATCCATAGGAACA-AATACAATATACTA---------------GTGTGAACATGT-AA---ATATATATCCTATGTCTATTT-TACATATAAGCATATATGATCAAA-AATATAGTCAAGAAATTTTAAATC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683199 151 + 127223203 AAAATATTTA---AAAGTACTTA-----------------------------------------------------------------------------TGAAT---TTTATTT----GAAAACCACATCCATAGGAACA-AATACAATATACTA---------------GTGTGAACATGT-AA---ATATATATCCTATGTCTATTT-TACATATAAGCATATATGATCAAA-AATATAGTCAAGAATTTTTAAATC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127397 151 - 1799296 AAAATATTTA---AAAGTACTTA-----------------------------------------------------------------------------TGAAT---TTTATTT----GAAAACCACATCCATAGGAACA-AATACAATATACTA---------------GTGTGAACATGT-AA---ATATATATCCTATGTCTATTT-TACATATAAGCATATATGATCAAA-AATATAGTCAAGAATTTTTAAATC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726112 146 + 6934359 AAAATATTTA---AAAGTACTTA-----------------------------------------------------------------------------CGAAT---TTTATTT----GAAAACCACATCCTTAGGAACA-AATACAA-----TA---------------GTGTGAACATGT-AA---ATATATATCCTATGTCTATTT-TAGATATAAGCATATATGATGAAA-AATATAGTCAAGAATTTTTAAATC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108085401 149 - 128169293 GAAAT-TTTA---AAAGTACTT---------------------------------------------------------------------------------AT---TCTATTGAAAAAAAAAACACATTCATAAGATAA-ATTACAATATAATA---------------TTGTGAACACGT-AA---A-ATATATTCTATGTCTATTT-AACATATAAGCATATATGATTTAA-AATATCGTTAAGAATTTTAAAACC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 706586 150 - 18371965 GAAAT-TTTA---AAAGTACTTA-----------------------------------------------------------------------------TAAAT---TCTATTG----AAAAAACATATCCATAAGAAAA-ATTACAATTTAATA---------------TTGTGAACATGT-AA---ATATATATCCTATGTCTATTT-TACATATAAGTATATATGATTTAA-AATATCATTAAGAATTTTAAAACC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1366980 150 + 3566421 GAAAT-TTTT---AAAGTACTTA-----------------------------------------------------------------------------TTAAT---TCTATTG----AAAAAACACATCCATAAGAAAA-ATTACAACATAATA---------------TTGTGAACACGT-AA---ATATATATCCTATGTCTATTT-TACGTATAAGCATATATGATTTAA-AATATGGTTAAGAATTTTAAAACC i cebCap1.NW_016107540v1 C 0 I 43 s aotNan1.NW_018514471v1 1869572 151 - 9267652 GAAAT-TTTA---AAAGTACTTA-----------------------------------------------------------------------------TTAAT---TCTATTG---AAAAAAACACATCCACAAGAAAA-ATTACAATATAATA---------------TTGTGAACACGT-AA---ATATATATCCTATGTCTATTT-TACATATAAGCATATATGATTTAA-AATATCGTTAAGAATTTTGAAACC i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51739042 176 - 55844845 AAAATGAATAAATAATGTACTTA-----------------------------------------------------------------------------TTAATGACTTTTGTA----TGAAATCATACCCATAAAAATAGATTATGATGTTCCAAACATCAATTACTTTATATGtatatgt-actttatatgtactttatatgtactt-tatatgtGAGTAT-TATAATGAAAGAGTATAATTACACATGCTAAGATC i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1139744 234 + 1446996 AAACTCCCTA---AAGGTAATCAGTAAATAATTAGGAATAACTGTAAGTTGTAAACAGCACTGGAAACACATATTTAAATTGAAATAAGGTATTTCTTAGTTAAT---TTTAACT----AAAA--TAAACCCATAAGAACA-GACAAATTATGATA----------GTTATTTTTGAACATGTGAA---ATATGTATCCTATATATATTTATTTAAGAAAGCATGAATAATGAAAGAATATGTTTAAGCATTCCAAAGCC i dasNov3.JH578441 I 304 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I a score=75260.000000 s hg38.chrUn_KI270749v1 42328 10 + 158759 TAGTATTATC--- s panTro5.chr1 101868601 10 - 228573443 TAGTATTATA--- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497863 10 - 162613886 TAGTATTATA--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22072 10 - 126596 TAGTATTATA--- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746536 10 + 99891981 TAGTATTATG--- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443382 10 - 185818997 TAGTATTACA--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273016 10 + 192294377 TAGTATTACA--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755068 10 + 3123512 TAGTATTACA--- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475341 10 + 10077455 TAGTATTACA--- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683350 10 + 127223203 TAGTATTACA--- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127548 10 - 1799296 TAGTATTACA--- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726258 10 + 6934359 TAGTATTACA--- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108085550 10 - 128169293 TAGTTTTAAA--- i calJac3.chr8 C 0 I 530 s saiBol1.JH378145 706736 10 - 18371965 TAGTTTTAAA--- i saiBol1.JH378145 C 0 I 12 s aotNan1.NW_018514471v1 1869723 10 - 9267652 TAGTTTTAAA--- i aotNan1.NW_018514471v1 C 0 I 6 s canFam3.chr18 51739218 10 - 55844845 TATTACTACA--- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1139978 10 + 1446996 ---TATTACCCCA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I e cebCap1.NW_016107540v1 1367130 43 + 3566421 I a score=12376.000000 s hg38.chrUn_KI270749v1 42338 1 + 158759 A s panTro5.chr1 101868611 1 - 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497873 1 - 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22082 1 - 126596 A i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746546 1 + 99891981 A i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443392 1 - 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273026 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755078 1 + 3123512 A i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475351 1 + 10077455 A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683360 1 + 127223203 A i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127558 1 - 1799296 A i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726268 1 + 6934359 A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108086090 1 - 128169293 a i calJac3.chr8 I 530 I 4 s saiBol1.JH378145 706758 1 - 18371965 A i saiBol1.JH378145 I 12 I 21 s aotNan1.NW_018514471v1 1869739 1 - 9267652 A i aotNan1.NW_018514471v1 I 6 I 27 s canFam3.chr18 51739228 1 - 55844845 A i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1139988 1 + 1446996 A i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I e cebCap1.NW_016107540v1 1367130 43 + 3566421 I a score=433146.000000 s hg38.chrUn_KI270749v1 42339 37 + 158759 AGTAAAAATTAGTT-AACTTCTGATGA----TTGTTAATTAA s panTro5.chr1 101868612 42 - 228573443 AGTAAAAATTAATTAAACTTCTGATGATTATTTGTTAATTAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497874 41 - 162613886 AGTAAAAATTAGTT-AACTTCTGATGATTATTTGTTAATTAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22083 41 - 126596 AGTAGAAATTAGTG-AACTTCTGATGATTATTTGTTAATTAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746547 41 + 99891981 AGTAAAAATTAGTT-AACTTCTGATGATTATTTGTTAATTAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443393 41 - 185818997 AGTAAAAATTAGTT-AACTTCTGATGATGATTTGTTAATTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273027 41 + 192294377 AGTAAAAATTAGTT-AACTTCTGATGATGATTTGTTAATTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755079 41 + 3123512 AGTAAAAATTAGTT-AACTTCTGATGATGATTTGTTAATTAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475352 41 + 10077455 AGTAAAAATTAGTT-AACTTCTGATGATGATTTGTTAATTAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683361 41 + 127223203 AGTAAAAATTAGTT-AACTTCTGATGATGATTTGTTAATTAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127559 41 - 1799296 AGTAAAAATTAGTT-AACTTCTGATGATGATTTGTTAATTAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726269 40 + 6934359 AGTAAAAATTAGTT-AACTTTTGATGATTATTTA-TAATTAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108086095 37 - 128169293 ----aaaaTTAGTT-AACTTCTGATGATTATTTGTTAATTAA i calJac3.chr8 I 4 C 0 s saiBol1.JH378145 706780 41 - 18371965 AGTTAAAATTAGTT-AACTTCTGATGATTATTTGTTAATTAA i saiBol1.JH378145 I 21 C 0 s cebCap1.NW_016107540v1 1367173 41 + 3566421 AGTTAAAATTAATT-AACTTCTGATGATTATTTGTTAATTAA i cebCap1.NW_016107540v1 I 43 C 0 s aotNan1.NW_018514471v1 1869767 41 - 9267652 AGTTAAAATTAGTT-AACTTCTGATGATTATTTGTTAATTAA i aotNan1.NW_018514471v1 I 27 C 0 s canFam3.chr18 51739229 37 - 55844845 ACCATAAATTAGTT-AACTTTTTATATTCATTTGTTAA---- i canFam3.chr18 C 0 I 1199 s dasNov3.JH578441 1139989 37 + 1446996 ACTATAAAATAATT-AACTTTTGATGGTAATTTACTAA---- i dasNov3.JH578441 C 0 I 1 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I a score=60264.000000 s hg38.chrUn_KI270749v1 42376 7 + 158759 ------GATAAAA- s panTro5.chr1 101868654 7 - 228573443 ------GATAAAA- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497915 7 - 162613886 ------GATATAA- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22124 7 - 126596 ------GATAAAA- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746588 7 + 99891981 ------GATAAAA- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443434 7 - 185818997 ------GATATAA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273068 7 + 192294377 ------GATATAA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755120 7 + 3123512 ------GATATAA- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475393 7 + 10077455 ------GATATAA- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683402 7 + 127223203 ------GATATAA- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127600 7 - 1799296 ------GATATAA- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726309 7 + 6934359 ------GATATAA- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108086132 7 - 128169293 ------GATATAA- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 706821 7 - 18371965 ------GATATAA- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1367214 7 + 3566421 ------GATATAA- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1869808 7 - 9267652 ------GATATAA- i aotNan1.NW_018514471v1 C 0 C 0 s dasNov3.JH578441 1140027 14 + 1446996 GCTGACGCTATTAT i dasNov3.JH578441 I 1 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I e canFam3.chr18 51739266 1199 - 55844845 I a score=1306744.000000 s hg38.chrUn_KI270749v1 42383 132 + 158759 TTATTTTGATTTGGGTGATTTTAAATAAAGAAAA-------AAATTACATGACAAAAA--TTCTTTATAAAATGTTTATGATTTTTACATTGGTTTT----ATCACTTTATTCC-ACTATTTTATTTTAAGATGACCAGCCTTGTT s panTro5.chr1 101868661 137 - 228573443 TTATTTTGATTTGGGTGATTTTAAATGAACAAAA--ATATTAAATTACATGACAAAAA--TTCTTTATAAAATGTTTACGATTTTTACATTGGTTTT----ATCACTTTATTCC-ACTATTTTATTTTAAGATGACCTGCCTTGTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108497922 138 - 162613886 TTATTTTGATTTGGGTGATTTTAAATAAACAAAA--ATATTAAATTACATGACAAAAAG-TTCTTTATAAAATGTTTATGATTTTAACATTGGTTTT----ATCACTTTATTCC-ACGATTTCATTTTAAGATGACCTGCCTTGTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22131 137 - 126596 TTATTTTGATTTGGGTGATTTTAAATAAACAAAA--ATATTAAATTACATGACAAAAA--TTCTTTATAAAATGTTTATGATTTTTACATTGGTTTT----ATCACTTTATTCC-ACTATTTTATTTTAAGATGACCTGCCTTGTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746595 139 + 99891981 TTATTTTGATTTGGGTGATTTTAAATAAACAAAA-AATATTAAATTACATGACAAAAAG-TTCTTTATAAAATGTTTATGATTTTTACATTGGTTTT----ATCACTTTATTCT-ACTATTTTATTTTAAGATGACCTGCCTTGTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443441 137 - 185818997 TAATTTTGATTTGGGTGATTTTAAATAAACAAAT--ATATTAAATTACGTGACAAAATG-TTTTTAATAAACTGTTTATGATTTTTACATTGGTTTT----ATCACTTTATTCC-ATTATTTTATTTTAA-ATGACCTGTCTTGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273075 137 + 192294377 TAATTTTGATTTGGGTGATTTTAAATAAACAAAT--ATATTAAATTACGTGACAAAATG-TTTTTAATAAAATGTTTATGATTTTTACATTGGTTTT----ATCATTTTATTCC-ATTATTTTATTTTAA-ATGACCTGTCTTGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755127 132 + 3123512 TAATTTTGATTTGGGTGATTTTAAATAAACAAA-------TAAATTACGTGACAAAATG-TTTTTAATAAAATGTTTATGATTTTTACATTGGTTTT----ATCACTTTATTCC-ATTATTTTATTTTAA-ATGACCTGTCTTGTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475400 137 + 10077455 TAATTTTGATTTGGGTGATTTTAAATAAACAAAT--ATATTAAATTACATGACAAAATG-TTTTTAATAAAATGTTTATGATTTTTACATTGGTTTT----ATCACTTTATTCC-ATTATTTTATTTTAA-ATGACCTGTCTTGTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683409 137 + 127223203 TAATTTTGATTTGGGTGATTTTAAATAAACAAAT--ATATTAAATTACATGACAAAATG-TTTTTAATAAAATGTTTATGATTTTTACATTGGTTTT----ATCACTTTATTCC-ATTATTTTATTTTAA-ATGACCTGTCTTGTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127607 137 - 1799296 TAATTTTGATTTGGGTGATTTTAAATAAACAAAT--ATATTAAATTACATGACAAAATG-TTTTTAATAAAATGTTTATGATTTTTACATTGGTTTT----ATCACTTTATTCC-ATTATTTTATTTTAA-ATGACCTGTCTTGTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726316 138 + 6934359 TTATTTTGATTTGGGTGATTTTAAATAAACAAAT--ATATTAAAGTACATAACAAAAAGATTTTTTATAAAATGTTTATGATTTTTACATTGGTTTT----ATCACTTTATTCC-ATTATTTTATTTTAA-ATGACCTGCCTTGTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108086139 138 - 128169293 TTATTTTGATTTGGATGATTTTAAATGAACAAAA--ATATTAAATTACATGACAAAAAG-TTATTTATGAAATGTTTATGATTTTTACATTGGTTTT----ATTAATTCATTCT-GCTATTTTATTTTAAGATGGTCTGCCTTGTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 706828 133 - 18371965 TTATTTTGATTTGGGTGATTTTAAATAAACAAAA-------AAATTACATGACAAAAAG-TCATTTATGAAATGTTTATTACTTTTACATTGGTTTT----ATTAATTTATTCT-GCTATTTTATTTTAAGATGATCTGCCTTGTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1367221 138 + 3566421 TTATTTTGACTTGGGTGATTTTAAATAAACAAAA--ATATTAAATTACGTGACAAAAAG-TTATTTATGAAAAGTTTATGATTTTTACATTGGTTTT----ATTAATTTATTCT-GCTATTTTATTTTAAGATGATCTGCCTTGTT i cebCap1.NW_016107540v1 C 0 I 331 s aotNan1.NW_018514471v1 1869815 142 - 9267652 TTATTTTGATTTGGGTGATTTTAAATAAACGAAA--ATATTAAATTACATGACAAAAAG-TTATTTATGAAATGTTTATGATTTTTACGTTGGTTTTTTTCATTAATTTATTCC-ACTATTTTATTTTAAGATGATCTGCCTTGTT i aotNan1.NW_018514471v1 C 0 I 343 s canFam3.chr18 51740465 105 - 55844845 TTTCTTTAATTTGGATGATGTTATATAAAATAATAAATGTTAAATACCAAGAAAAAACT-T-------------------------------GTTTT----ATTATCTTTTACCAACTATTTCATTTTAAAGGTACCTGAT----- i canFam3.chr18 I 1199 I 2 s dasNov3.JH578441 1140041 130 + 1446996 TTATTTTTATTTGGATGATGCTGAATAAAACAATGAGTGTTAAGTAACAGAACAAGAAA-ATATTTCTGAAATTACTGTGATTTCT---TTCCTCTT----ATAATAT----CC-ACTAATTTATTTTAAGATGACCTTTATT--- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I a score=53023.000000 s hg38.chrUn_KI270749v1 42515 5 + 158759 TAAAA---- s panTro5.chr1 101868798 5 - 228573443 TAAAA---- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108498060 5 - 162613886 TAAAA---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22268 5 - 126596 TAAAA---- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746734 5 + 99891981 TAAAA---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443578 5 - 185818997 TAAAA---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273212 5 + 192294377 TAAAA---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755259 5 + 3123512 TAAAA---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475537 5 + 10077455 TAAAA---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683546 5 + 127223203 TAAAA---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127744 5 - 1799296 TAAAA---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726454 5 + 6934359 TAAAA---- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108086277 5 - 128169293 TAAAA---- i calJac3.chr8 C 0 I 331 s saiBol1.JH378145 706961 5 - 18371965 TAAAA---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1367690 5 + 3566421 taaaA---- i cebCap1.NW_016107540v1 I 331 C 0 s aotNan1.NW_018514471v1 1870300 5 - 9267652 taaaA---- i aotNan1.NW_018514471v1 I 343 C 0 s canFam3.chr18 51740572 5 - 55844845 TAAAT---- i canFam3.chr18 I 2 C 0 s dasNov3.JH578441 1140171 7 + 1446996 --AAATTAT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I a score=76363.000000 s hg38.chrUn_KI270749v1 42520 7 + 158759 CACTGTA s panTro5.chr1 101868803 7 - 228573443 CACTGTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108498065 7 - 162613886 CACTGTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22273 7 - 126596 CACTGTA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746739 7 + 99891981 TACTGTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443583 7 - 185818997 CACTGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273217 7 + 192294377 CACTGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755264 7 + 3123512 CACTGTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475542 7 + 10077455 CATTGTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683551 7 + 127223203 CACTATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127749 7 - 1799296 CACTGTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726459 7 + 6934359 CACTGTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108086613 7 - 128169293 CACTGTA i calJac3.chr8 I 331 C 0 s saiBol1.JH378145 706966 7 - 18371965 CACTGTA i saiBol1.JH378145 C 0 I 335 s cebCap1.NW_016107540v1 1367695 7 + 3566421 CACTGTA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1870305 7 - 9267652 CACTGTA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51740577 7 - 55844845 TATTTCG i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1140178 7 + 1446996 TAATGTG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I a score=3141351.000000 s hg38.chrUn_KI270749v1 42527 334 + 158759 TTCATCTTAATTAAATTAAA----TTCCATTTGT-AAAAAAA------TTAACAAATG------ATTTGCTGTATTGTACAGTGCGGTTATAAACTGAGTC---AGCGTCTCAAGATTTGATCCCCTTTATCATCATCTGTGGCCCTATTTGTTTGATAAATGTATTGTCTTTTTCCA-TGCCTGTCACATCTCTATTGCTCTTTCATTTTTCTCTTTGTCCCTTATAGGGAGCATT-GCCTATCTCTAGATTAAGCAAAAG-TTGCATCTT---------------------------------------------AAAAAAGCACAATAACCTGCTCAATCTTTCTCACACAGAGAA--ATG---TTTGTTAAGTAATTAAAGTGTAGATGATGATACAAAGAGC s panTro5.chr1 101868810 334 - 228573443 TTCATCTCAGTTAAATTAAA----TTCCATTTGT-AAAAAAG------TTAACAAATG------ATTTGCTCTATTATACAGTGCGGTTATAAACTGAGTC---AGTATCTCAAGATTTGATCCCCATTATCGTCATCCGTGGCCCTATTTGTTTGATAAATGTAGTGTCTTTTTCCA-TGCCTGTCACATCTCTATTGCTCATTTATTTTTCTCCTTGTCCCTTAGAGGGAGCATT-GCCTATCTCTAGATTAAGCAAAAG-TTGCATCTT---------------------------------------------AAAAAAGCACAATAACCTGCTCAATCTTTCTCACACAGAGAA--ATG---TTTGTTAAGTAATTAAAGTGTAGATGATGATACAAAGAGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108498072 339 - 162613886 TTCATCTTAATTAAATCAAGGTGTTTCCATTTGT-AAAAAAA------TTAACAAATG------ATTTGCTCCATTATACAGTGCAGTCATAAACTGAGTC---AGTATCTCAAGATTTGATCCCCATTATCGCCATCTGTGGCCCTATTTGTTTTATAAATGTATTGCCTTTTTCCA-TGCCTGTCACATCTCTATTGCTCATTCATTTTTCTCTTTTTCCCTTATAGGGAGCATT-GCCTATCTCTAGATTGAGCAAAAG-TTGCATCTT--------------------------------------------GAAAAAAGCACAATAACCTGCTCAATCTTTCTCACACAGAGAA--ATG---TTTGTTAAGTAATTAAAGTGTAGATGATGATACAAAGAGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22280 330 - 126596 TTCATC----TTAAATTAAA----TTCCACTTGT-AAAAAAA------TTAACAAATG------ATTTGCTCTATTGTACAGTGCGGTTATAAACTGAGTC---AGTATCTCAAGATTTGATCCCCATTATCATCATCTGTGGCCCTCTTTGTTTTATAAATGTGTTGTCTTTTTCCA-TGCCTGTCACATCTCTATTGCTCTTTCATTTTTCTCTTTGTCCCTTATAGGGAGCATT-GCCTATCTCTAGATTAAGCAAAAG-ATGCATCAT---------------------------------------------AAAGAAGCACAATAATCTGCTCAATCTTTCTCAAACAGAGAA--ATG---TTTGTTAAGTAATTAAAGTGTAGATGATGATACAAAGAGC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55746746 338 + 99891981 TTCATCTTAATTAAATCAAGGTGTTTCCATTTGT-AAAAAAA------TTAACAAATG------ATCTGCTCTATTATACAGTGTGGTTATAAACTGAGTC---AGTATCTCAAGATTTGATCCCCATTATCGTCATCTGTGGCCCTATTTGTTTTATAAATGTATTGTCTTTTTCCA-TGCCTGTCACATCTCTATTGCTCATTCATTTTCCTCTTTGTCCCTTATAGGGAGCATT-GCCTATCTCTAGATTAAGCAAAAG-TTGCGTCTT---------------------------------------------AAGAAAGCACAATAACCTGCTCAATCTTTCTCACACAGAGAA--ATG---TTTGTTAAGTAATTGAAGTGTAGATGATGATACAAAGAGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443590 341 - 185818997 TTCATCTTAATTAAATTAAGGTGCTTCCATTTGT-AAAAAAA------TTCACAAATG------ATTTGCTCTATTATACAATGAGGTTATAAACTGAGTCAGTAGTATCTCAAGATTTGATCCCCATTATCGTAATCTATGGCCCTACTTGTTTATTAAGTGTATTGTCTTTCTCCA-TGTCAGTCACATCACTATTGCTCATTCATTTTTCTCTTTGTCCCTTATAAGGAACATT-GCCTATCTCTAGATTAAGCAAAAG-TTGTTTCTT---------------------------------------------AAAAAAGCACAATAACCTGCTCAATCTTTCTCACACACAGAA--ATG---TTTCTTAAGTAATTAAAGTGTAGATGAAGTTATAAAGAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273224 341 + 192294377 TTCATCTTAATTAAATTAAGGTGCTTCCATTTGT-AAAAAAA------TTCACAAATG------ATTTGCTCTATTATACAATGAGGTTATAAACTGAGTCAGTAGTATCTCAAGATTTGATCCCCATTATCGTAATCTATGGCCCTACTTGTTTATTAAGTGTATTGTCTTTCTCCA-TGTCAGTCACATCACTATTGCTCATTCATTTTTCTCTTTGTCCCTTATAAGGAACATT-GCCTATCTCTAGATTAAGCAAAAG-TTGCTTCTT---------------------------------------------AAAAAAGCACAATAACCTGCTCAATCTTTCTCACACACAGAA--ATG---TTTGTTAAGTAATTAAAGTGTAGATGAAGTTATAAAGAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755271 341 + 3123512 TTCATCTTAATTAAATTAAGGTGCTTCCATTTGT-AAAAAAA------TTCACAAATG------ATTTGCTCTATTATACAATGAGGTTATAAACTGAGTCAGTAGTATCTCAAGATTTGATCCCCATTATCGTAATCTATGGCCCTACTTGTTTATTAAGTGTATTGTCTTTCTCCA-TGTCAGTCACATCACTATTGCTCATTCATTTTTCTCTTTGTCCCTTATAAGGAACATT-GCCTATCTCTAGATTAAGCAAAAG-TTGCTTCTT---------------------------------------------AAAAAAGCACAATAACCTGCTCAATCTTTCTCACACACAGAA--ATG---TTTGTTAAGTAATTAAAGTGTAGATGAAGTTATAAAGAGT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475549 338 + 10077455 TTCATCTTAATTAAATTAAGGTGTTTCCATTTGT-AAAAAAA------TTCACAAATG------ATTTGCTCTATTATACAATGAGGTTATAAACTGAGTC---AGTATCTCAAGATTTGATCCCCATTATCGTAATCTATGGCCCTATTTGTTTAATAAATATATTGTCTTTTTCCA-TGTTGGTCACATCACTATTGCTCATTCATTTTTCTCTTTGTCCCTTATAAGGAGCATT-GCCTATCTCTAGATTAAGCAAAAG-TTGCTTCTT---------------------------------------------AAAAAAGCACAATAACCTGCTCAATCTTTCTCACACAGAGAA--ATG---TTTGTTAAGTAATTAAAGTGTAGATGAAGTTATAAAGAGT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683558 338 + 127223203 TTCATCTTAATTAAATTAAGGTGTTTCCATTTGT-AAAAAAA------TTCACAAATG------ATTTGCTCTGTTATACAGTGAGGTTATAAACTGAGTC---AGTATCTCAAGATTTGATCCCCATTATCGTAATCTATGGCCCTATTTGTTTAATAAATATATTGTCTTTTTCCA-TGTTGGTCACATCACTATTGCTCATTCATTTTTCTCTTTGTCCCTTATAAGGAGCATT-GCCTATCTCTAGATTAAGCAAAAG-TTGCTTCTT---------------------------------------------AAAAAGGCACAATAACCTGCTCAATCTTTCTTACACAGAGAA--ATG---TTTGTTAAGTAATTAAAGTGTAGATGAAGTTATGAAGAGT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1127756 328 - 1799296 TTCATCTTAATTAAATTAAGGTGTTTCCATTTGT-AAAAAAA------TTCACAAATG------ATTTGCTCTATTATACAATGAGGTTATAAACTGAGTC---AGTATCTCAAGATTTGATCCCCAT----------TATGGCCCTATTTGTTTAATAAATATATTGTCTTTTTCCA-TGTTGGTCACATCACTATTGCTCATTCATTTTTCTCTTTGTCCCTTATAAGGAGCATT-GCTTGTCTCTAGATTAAGCAAAAG-TTGCTTCTT---------------------------------------------AAAAAAGCACAATAACCTGCTCAATCTTTCTCACACAGAGAA--ATG---TTTGTTAAGTAATTAAAGTGTAGATGAAGTTATAAAGAGT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726466 338 + 6934359 TTCATCTTAACTAAATTAAGGTATTTCCATTTGT-AAAAAAA------TTCACAAATG------ATTTGCTCTATTATACAACGAGGTTATAAACTGAGTC---AGTATCTCAAGTTTTGATCCTCATTATTGTAATCTATGGCCCTATTTGTTTAATAAATGTATTGTCTTTCTCCA-TGTCGGTCACATCACTATTGCTCATTCATTTTTCTCTTTGTCCCTTATAAGGAGCATT-GCCTATCTCTAGATTAAGCAAAAG-TTGCTTCTT---------------------------------------------AAAAAAGCACAATAACCTGCTCAATCTTTCTCACACAGAGTA--ATG---TTTGTTAGGTAATTAAAGTGTAGATGAAGTTGTAAAGAGT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108086620 331 - 128169293 TTCATCTTAATTAAATTAACCTGTTTCCATTCATAAAAAAAA------TTCACAATTG------ATTTGCCTTATCTTAGAGTGAGGTTATAAACTGAGCC---AATAGCTCAAGATTTGAAATGCATTATCGTCATCTATGGCCCTCTTTGTTTTATAAATGTATT---TTTCTCTA-CCTCTGTCACATCTC--TTGCTAATTCATTTTTCTCATTGTTCCTTATAGGAAGCATT-AGCTATCTCTAGATTGAGCAAAAGTTTGTGTCTT---------------------------------------------AAAAAAACACAATAACCTGCTCAATCTTTCTCACACAAAGAA--ACG---TTTGTTAGGTA----AAGTGTAGATGATTGTATAAAGAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 707308 322 - 18371965 TTCATCTTAATTAAATTAA-------CCATTTGT--AAAGAA------TTCACAATTG------ATTTGCCCTATCTTAGAGTGAGGTTATAAACTGAGTC---AATATCTCAAGATTTGAAATGCATTATCGTCATCTATGGCCCTCTTTGTTTCATAAATGTATT---TTTTTCCA-CATCTGTCACATCTC--TTGCTCATTCATTTTTCTCATTGTCACTTATAGGAAGCATT-AGCTATCTCTAGATTGAGCAAAATTTTGTGTCTT---------------------------------------------AAAAAAACACAATAACCTGCTCAATCTTTCTCACACAAAGAA--ATG---TTCGTTAAGTA----AAGTGTAAATGATGATGTAAAGAGC i saiBol1.JH378145 I 335 C 0 s cebCap1.NW_016107540v1 1367702 326 + 3566421 TTCATCTTAATTAAATTAACCTGTTTCCATTTGT--AAAAAA------TTCACAATTG------ATTTGCC----CTTAGAGTGAGGTTATAAACTGAGTC---AATATCTCGAGATTTGAAATGCATTATCGTCATCTATGGCCCTCTTTGTTTCATAAATGTATT---TTTTTTCATCATATGTCACATCTC--TTGCTCATTCATTTTTCTCATTGTCCCTTATAGGAAGAATT-AGCTATCTCTAGATTGAGCAAAAGTTTGTGTCTT---------------------------------------------AAAAAAACGCAATAACCTGCTCAATCTTTCTCACACAAAGAA--ACG---TTTGTTACGTA----AAGTGTAGATGATGATATACAGAGT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1870312 321 - 9267652 TTCATCTTAATTAAATTAACCTGTTTCCATTTGT--AAAAAA------TTCACAATTG------ATTTGCC----CTTAGAGTGAGGTTATAAACTGAGTC---AATATCTCAAGGTTTGAAATGCATTATCGTCATCTATGGCCCTCTTTGTTTTATAAATGTATT---TTTTTCCA-CATCTGGCACATCTC--TTGCTCATTCATTTTTCTCA-TGTCCCTT---GGAAGCATT-AGCTATCTCTAGATTGAGCAAAAGTTTGTGTCTT---------------------------------------------AAAAAAACACAATAACCTGCTCAATCTTTCTCACACAAAGAA--ACA---TTTGTTAAGTA----AAGTGTAGATGATGATATAAAGAGT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51740584 381 - 55844845 TTCAT-TTAATTAAACTGGGGTGTTTACATTTATAAAAAAAA------TCCACAATTTTATAACATCCACTCTATTTCACAG------TACAAGTCTGACC---AATATCTCATGATTTGATCCTCATTATCACGATAGATGGCCCTACTTGTTTTATAAATTTATTGTGTTTTCTTA-TCCCTATCTTACTGC----CTTCATTTATTTCTCTTATTTTCCCTTACTCTGGACATTAACCTGTCTTTGCATTAATCAATGG--TATATATTATGGGGAAACCAAAAAAAAAAAAAAagagagagagagagagagagagagaAGGACAGCGATCTGCTGGATATTTCCCACACAAAGAAATATG---TTTTTTTAGTGATTAAAGTATTGATGATTACATGATGAAT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1140185 350 + 1446996 TTCAACTTAATAAAACTGATGTGTTTGA----GT-AAAAAAATATTACTCCAAAACTGTGTATCATTCATTCTGTTTCTCAGTGGAGTTATAAGCTGAATT---ACCATTTTGCGTTTTGATGCCTGTTATCAATATATATTGCACTACCTGCTTTAGAAATACATTGACTTTTACCA-TTTCTATCCTATTAA----GATCCTTCATTTTT-TCTTACTACCTTACTATTGACATAGGTCTATCTGTGAATTAAGAAATCG--TATATATT---------------------------------------ATACAGAAAAAGGCACAGTGATTCCCATGATCTTTCTCACACAAAGAA--AGGTGTTCTTTTCAGTGATCAAAGTACTGATAATCAGAAGAGGAGT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 999897 1299 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I a score=76177.000000 s hg38.chrUn_KI270749v1 42861 6 + 158759 TTGATT s panTro5.chr1 101869144 6 - 228573443 TTGATT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108498411 6 - 162613886 TTGATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22610 6 - 126596 TTGATT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747084 6 + 99891981 TTGATT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443931 6 - 185818997 CTGATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273565 6 + 192294377 CTGATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755612 6 + 3123512 CTGATT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475887 6 + 10077455 CTGATT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683896 6 + 127223203 CTGATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128084 6 - 1799296 CTGATT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726804 6 + 6934359 CTGATT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108086951 6 - 128169293 TCGATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 707630 6 - 18371965 TTGATT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368028 6 + 3566421 TTGATT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1870633 6 - 9267652 TTGATT i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 1001196 6 - 1121937 TTGTTC i tarSyr2.KE946558v1 I 1299 I 451 s canFam3.chr18 51740965 6 - 55844845 TTGATT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1140535 6 + 1446996 CTGATT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e otoGar3.GL873564 12700953 10 + 14340318 I a score=874096.000000 s hg38.chrUn_KI270749v1 42867 81 + 158759 AAATTAGATGC-CAAAGTACCCTTGTGATTCAGAATATGAATGGTATTTAATTTCTTTGAAATCATTAATTGCTGAGTGACA s panTro5.chr1 101869150 81 - 228573443 AAATAAGATGC-CAAAGTACCCTTGTGATTCAGAATATGAATGGTATTTAATGCCTTTGAAATCAATAATTGCTGAGTGACA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108498417 81 - 162613886 AAATTAGATGC-CAAAGTACCCTTGTGATTCAGAATATGAATGGTATTTAATTTCTTTGAAATCAATAATTGCTGAGTGACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22616 81 - 126596 AAATTAGATGC-CAAAGTACCTTTGTGATTCAGAATATGAATGGTATTTAATTTCTTTGAAATCATGAATTGCTGAGTGACA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747090 81 + 99891981 AAATTAGATGT-CAAAGTACCCTTGTGATTCAGAATATGAATGGTATTTAATTTCTTTGAAATCAATAATTGCTGACTGACA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133443937 81 - 185818997 AAATTAGATGC-CAAAGTACCCTTGTGATTCAAAATATGAATGACATTTAATTTATTTGAAATCAATAATTACTGAGTGACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273571 81 + 192294377 AAATTAGATGC-CAAAGTACCCTTGTGATTCAAAATATGAATGACATTTAATTTATTTGAAATCAATAATTGCTGAGTGACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755618 81 + 3123512 AAATTAGATGC-CAAAGTACCCTTGTGATTCAAAATATGAATGACATTTAATTTATTTGAAATCAATAATTGCTGAGTGACA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2475893 81 + 10077455 AAATTAGATGC-CAAAGTACCCTTGTGATTCAAGATATGAATGACATTTAATTTATTTGAAATCAATAATTGCTGAGTGACA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5683902 81 + 127223203 AAATTAGATGC-CAAAGTACCTTTGTGATTCAAAATATGAATGACATTTAATTTATTTGAAATCAATAATTGCTGAGTGACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128090 81 - 1799296 AAATTAGATGC-CAAAGTACCCTTGTGATTCAAAATATGAATGACATTTAATTTATTTGAAATCAATAATTGCTGAGTGACA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1726810 81 + 6934359 AAATTAGATGC-CAAAGTACCCTTGTGATTCAAAATATGAATGACATTTAATTTATTTGAAATCAATAATTGCTGAGTGACA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108086957 78 - 128169293 AAATTAGAAGC-CAATGTACCCTTGTGATTCAGAATATAAAT---ATTTAATTTCTTTGAAATCAATAATTGCTGAGCGACA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 707636 78 - 18371965 AAACTAGAAGC-CAATGTACCCTTGTGATTCAGATTATGAAT---ATTTAATTTCTTTGAAATCAATAATTGCTGAGTGACA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368034 78 + 3566421 AAACTAGAAGC-CAATGTACCTTTGTGATTCAGAATATGAAT---ATTTAATTTCTTTGAAATCAATAATTGCTGAGTGACA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1870639 78 - 9267652 AAATTAGAAGC-CAACATACCCTTGTGATTCAGAATATGAAT---ATTTAATTTCTTTGAAATCAATAATTGCTGAATGACA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51740971 80 - 55844845 AAATCAGAACC-CAAAGCACAC-TGTGATTCAGGATACATGTGGTGTTTAATCTTTTTAAAGTCAATAATTATTGGATTACA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1140541 75 + 1446996 AAATCAGAAACTCAAAGAACCCAAGTGATACAGAATGT-------ATTTCTTTTCTTTAAAAATAGTAATTGTTGGCTAACA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001202 451 - 1121937 I e otoGar3.GL873564 12700953 10 + 14340318 I a score=1120832.000000 s hg38.chrUn_KI270749v1 42948 141 + 158759 TTAATTAATGCCAATA-TTCCAGAAGTTGTTCTAGTTAGTGAAATGTATGCAACAT---GCAAAAGATTCAGAACTCTGAAGGGCAACATTATTCTATaattaagaattaagaattaattcacattaattattggggagaaataa s panTro5.chr1 101869231 141 - 228573443 TTAATTAATGCCAATA-TTTCAGAAGTTGTTCTGGTTAGTGAAATGTGTACAACAT---GTAAAAATTTCCGAACTCTGAAGGGCAACATTATTCTATAGTTAAGAATTAAGAATTAATTCACATTAATTGTTGGGGAGAAATAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108498498 137 - 162613886 TTAATTAATGCCAATA-TTTCAGAAGTTGTTCTAGTTAGTAAAATGTGTACAACAT---GCAAAAGATTCAGAACTCTGAAGGGCAACATTATTCTATaattaagaattaag----aattcacattaattattggggagaaatta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22697 140 - 126596 TTAATTAATG-CAATA-TTCCAGAAGTTGTTCTAGTTAGTGAAATGGATACAACAT---GCAAAAGATTCAGAACTCTGAAGGGCAACATTATTCTAtaattaagaattaacaattaattcacattaattaTTGGGGAGAAATAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747171 141 + 99891981 TTAATTAATGCCAATA-TTTCAGAAGTTGTTCTAATTAGTAAAATGTATACAACAT---GCAAAAGTTTCAGAACTCTGAAGGGCAACATTATTCTGTAACTAAGAATTAAGGATTAATTCACATTAATTATTGGGGAGAAATAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444018 141 - 185818997 TTAATTAATGCCAATA-TTTCAGGAGTTGTTCTAGTTAGCAAAATGTATACAACAC---GCAAAACGTTCAGAACTCTGAAGGGCAACATTATTCTATAATTAAGAATTAAGAATTAATTCACATTAGTCATTGGGGAGAAATAA i rheMac8.chr3 C 0 I 3 s macFas5.chr3 67273652 141 + 192294377 TTAATTAATGCCAATA-TTTCAGGAGTTGTTCTAGTTAGCAAAATGTATACAACAC---GCAAAACGTTCAGAACTCTGAAGGGCAACATTATTCTATAATTAAGAATTAAGAATTAATTCACATTAGTCATTGGGGAGAAAAAA i macFas5.chr3 C 0 I 3 s macNem1.NW_012011522v1 2755699 141 + 3123512 TTAATTAATGCCAATA-TTTCAGGAGTTGTTCTAGTTAGCAAAATGTATACAACAC---GCAAAACGTTCAGAACTCTGAAGGGCAACATTATTCTATAATTAAGAATTAAGAATTAATTCACATTAGTCATTGGGGAGAAATAA i macNem1.NW_012011522v1 C 0 I 3 s cerAty1.NW_012000909v1 2475974 141 + 10077455 TTAATTAATGCCAATA-TTTCAGGAGTTGTTCTAGTTAGTAAAATGTATACAACAC---GCAAAACGTTCAGAACTCTGAAGGGCAACATTATTCTATAATTAAGAATTAAGAATTAATTCACATTAGTCATTGGGGAGAAATAA i cerAty1.NW_012000909v1 C 0 I 3 s chlSab2.chr21 5683983 141 + 127223203 TTAATTAATGCCAGTA-TTTCAGGAGTTGTTCTAGTTAGTAAAATGTATACAACAT---GCAAAAGGTTCAGAACTCTGAAGGGCAACATTATTCTATAATTAAGAATTAAGAATTAATTCACATTAGTCATTGGGGAGAAATAA i chlSab2.chr21 C 0 I 3 s manLeu1.NW_012105809v1 1128171 140 - 1799296 TTAATTAATGCCAATA-TTTCAGGAGTTGTTCTAGTTAGTAAAATGTATACAACAC---GCAAAACGTTCAG-ACTCTGAAGGGCAACATTATTCTATAATTAAGAATTAAGAATTAATTCACATTAGTCATTGGGGAGAAATAA i manLeu1.NW_012105809v1 C 0 I 3 s colAng1.NW_012115910v1 1726891 141 + 6934359 TTAATTAATGCCAATA-TTTCAGGAGTTGTTCTAGTTAGTAAAATGTATACAACAT---GCAAAAGGTTCAGAACTCTGAAGGGCAACATTATTCTATAATTAAGAATTAAGAATTAATTCACATTAGTTATTGGGGAGAAATAA i colAng1.NW_012115910v1 C 0 I 3 s calJac3.chr8 108087035 95 - 128169293 TTAATTAATGCCAATA-TTTTATAAGTTGTTCTAGTTAGAAATATGTATACAACAT---CCAAAAATTTCAGAAGTCTG-AGGGCAACATTATGCTA-------------------AAT-------------------------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 707714 95 - 18371965 TTAATTAATGCCAATA-TTTTATAAGTTGTTGTAGATAGAAATATGTATACAACAT---CCAAACATTTCAGAAGTCTG-AGGGCAACATAATGCTA-------------------AAT-------------------------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368112 95 + 3566421 TTAATTAATGCCAATA-TTTTATAAGTTGTTCTAGATAGAAATATGTATACAATAT---CCAAACATTTCAGAAGTCTG-AGGGCAACATTATGCTA-------------------AAT-------------------------- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1870717 95 - 9267652 TTAATTAATGCCAATA-TTTTATAAGTTGTTCTAGTTAGAAATATGTATACAACAT---CCCAAAATTTCAGAAGTCTG-AGGGCAACATTATGCTA-------------------AAT-------------------------- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12700963 98 + 14340318 TTAATAAATGTTGATA-CTTCAGATGTTGTTCTGGTTAATATAATGTTTATGGTAC---ATTAAAGTTTCAGAGCTCTG-AAGGAAACATTATTTTAAACTTA------------------------------------------ i otoGar3.GL873564 I 10 C 0 s canFam3.chr18 51741051 97 - 55844845 TTAATTAATGTCAATATTTTCAGAAAAAAAATTAATCA-TAATATGCTCACAA-AT---GTACAAGTTTCAGAAACATGAAGGGAAGCATTAT------------------GAACTAATT------------------------- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1140616 126 + 1446996 TAAATGAACACCAATA-TTTCAGAAGAAATTCTAGCCAGTAAATGGCTCACAATATTTAATAAAGGTTTCAGAACTCTGCAGGGAAACTTTATTCTCTACTTAGCA---------------ACACTAATGATTAAGGAAAAA--- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001202 451 - 1121937 I a score=9090.000000 s hg38.chrUn_KI270749v1 43089 1 + 158759 t s panTro5.chr1 101869372 1 - 228573443 T i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 22837 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747312 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444162 1 - 185818997 T i rheMac8.chr3 I 3 C 0 s macFas5.chr3 67273796 1 + 192294377 T i macFas5.chr3 I 3 C 0 s macNem1.NW_012011522v1 2755843 1 + 3123512 T i macNem1.NW_012011522v1 I 3 C 0 s cerAty1.NW_012000909v1 2476118 1 + 10077455 T i cerAty1.NW_012000909v1 I 3 C 0 s chlSab2.chr21 5684127 1 + 127223203 T i chlSab2.chr21 I 3 C 0 s manLeu1.NW_012105809v1 1128314 1 - 1799296 T i manLeu1.NW_012105809v1 I 3 C 0 s nasLar1.chr3 66877679 1 + 179790006 C i nasLar1.chr3 N 0 I 604 s colAng1.NW_012115910v1 1727035 1 + 6934359 T i colAng1.NW_012115910v1 I 3 C 0 s calJac3.chr8 108087130 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 707809 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368207 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1870812 1 - 9267652 T i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001202 451 - 1121937 I e otoGar3.GL873564 12701061 0 + 14340318 C e canFam3.chr18 51741148 0 - 55844845 C e dasNov3.JH578441 1140742 0 + 1446996 C e panPan2.chr7 108498635 0 - 162613886 C a score=1259005.000000 s hg38.chrUn_KI270749v1 43090 115 + 158759 tattaagaattaatgattga-gaaAATGTTTTTATTTTTTATTTAGAAAATTATTTTGTACATGAGCATTACC---GCAAGTTTTGCAAGAAA--TATAA----ATTTAAAGAA---ACAATTATGTG s panTro5.chr1 101869373 114 - 228573443 T-TTAAGAATTAATGACTGA-GAAAACGTTTTTATTTTTTATTTAGAAAATTATTTTGTGCATGAGCATTACT---GCAAGTTTTGCAAGAAA--CATAA----ATTTATAGAA---ACAATTATGTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108498635 116 - 162613886 --ttaagaattaaTGACTGA-GAAACTGTTTTTATTTTTTATTTATAAAATTATTTTGTGCATGAGCATTACT---GTAAGTTTTGCAAGAAA--CATAA----ATTTAAGGGAAACAAAATTATGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22838 115 - 126596 TATTTAGAATTAATGACAGA-GAAAATGTTTTTATTTTTTATTTAGAAAATTATTTTGTGCAAGAGCATTACT---GCAAGTTTTGCAAGAAA--CATAA----ATTTAAAGAT---ACAATTATGTG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747313 118 + 99891981 TATTAAGAAATAATGACTGA-GAAAATGTTTTTATTTTTTATTTAGAAAATTATTTTGTGCATGAGCATTACT---GCAAGTTTTTCAAGAAA--CATAA----ATTTAAAGGAAACAAAATTATGTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444163 118 - 185818997 TACTAAGAATTAATGACTGA-GAAAATGTTTTTATTTTCTATTTAGAAAATTATTTTGTGCATGAGCATTACT---GCAAGTTTTGCAAGAAA--CATAA----ATTTAAAGGAAACAAAATTATGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273797 118 + 192294377 TACTAAGAATTAATGACTGA-GAAAATGTTTTTATTTTCTATTTAGAAAATTATTTTGTGCATGAGCATTACT---GCAAGTTTTGCAAGAAA--CATAA----ATTTAAAAGAAACAAAATTATGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755844 118 + 3123512 TACTAAGAATTAATGACTGA-GAAAATGTTTTTATTTTCTATTTAGAAAATTATTTTGTGCATGAGCATTACT---GCAAGTTTTGCAAGAAA--CATAA----ATTTAAAGGAAACAAAATTATGTG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476119 117 + 10077455 TACTAAGAATTAATGACTGA-GAAAATGTTTTTATTTTCTATTTAG-AAATTATTTTGTGCATGAGCATTACT---GCAAGTTTTGCAAGAAA--CATAA----ATTTAAAGGAAACAAAATTATGTG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684128 118 + 127223203 TACGAAGAATTAATGACTGA-GAAAATGTTTTTATTTTCTATTTAGAAAATTATTTTGTGCATGAGCATTACT---GCAAGTTTTGCAAGAAA--CATAA----ATTTAAAGGAAACAAAATTATGTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128315 118 - 1799296 TACTAAGAATTAATGACTGA-GAAAATGTTTTAATTTTCTATTTAGAAAATTATTTTGTGCATGAGCATTACT---GCAAGTTTTGCAAGAAA--CATAA----ATTTAAAGGAAACAAAATTATGTG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727036 118 + 6934359 TACTAAGAATTAATGACTGA-GAAAATGTTTTTATTTTCTATTTAGAAAATCATTTTGTGCATGAGCATTACT---GCAAGTTTTGCAAGAAA--CATAA----ATTTAAAGGAAACAAAATTATGTG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087131 117 - 128169293 TATTAAGAATTAGTGACTGA-GAAAGTATTTTTATTTTTTATTTAGAAAATCATTTTGTGCATGGGCATTTCT---GCAAGTTTTGTCAAAAA--CATAA----ATTTAAAGGAAAC-AAACCACATG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 707810 118 - 18371965 TAGTAAGAATTAATGACTGA-GGAAGtatttttattttttatttagaaaattattttGTGCATGGGCATTTCT---GCAAGTTTTGCCAAAAA--CATAA----ATTTAAAGGAAACAAAACCATGTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368208 118 + 3566421 TATTAAGAATTAATGACTGA-GGAAATATTTTTATTTTTTATTTAGAAAATTATTTTGTGCCTGGGCATTTCT---GTAAGTTTTGCCAAAAA--CCTAA----ATTTAAAGGAAACAAAACCACATG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1870813 118 - 9267652 TATTAAGAATTAATGACTGA-GAAAATATTTCTATTTTTTATTTAGAAAATCATTTTGTGCATGGGCATTTCT---GCAAGTTTTGCCAAAAA--TATAA----ATTTAAAGGAAACAAAACCACGTG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701061 117 + 14340318 --TTAAGGATTAAGGACTGA-GAAAAA---TTTATTTGTCATCTAGAAAATTATTTTTTACATGGACAGCACT---GCAGGTTTTGAAAAAAA--AAAAAGTCTATATAAAAAAAGGAAAACCATGTT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741148 116 - 55844845 ----AAAGGTTAGTGATTGAGGAAAATATGTTTATTTTTTATCTGGAAGATTAATTTGTGTATAGCTATTACTGTAGCAGGTTTTGCAAGAAAAGTCTAA----ATTAAAAAAAAGCAG----ACATG i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1140742 93 + 1446996 ------------------------AAT-TGTTTACTTTTCATCTAGAAGATTATTTTGTACATAAGTATCACA---GCAAGTACTGAATGCAAGTTTTTA----ATTAAAAAAG---AAATCCCTGTg i dasNov3.JH578441 C 0 I 904 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001202 451 - 1121937 I a score=50507.000000 s hg38.chrUn_KI270749v1 43205 4 + 158759 CACA s panTro5.chr1 101869487 4 - 228573443 CACA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108498751 4 - 162613886 CACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22953 4 - 126596 CACA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747431 4 + 99891981 CACA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444281 4 - 185818997 CACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273915 4 + 192294377 CACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755962 4 + 3123512 CACA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476236 4 + 10077455 CACA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684246 4 + 127223203 CACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128433 4 - 1799296 CACA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727154 4 + 6934359 CACA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087248 4 - 128169293 CCCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 707928 4 - 18371965 CACA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368326 4 + 3566421 CACA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1870931 4 - 9267652 CACA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701178 4 + 14340318 CACA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741264 4 - 55844845 TATA i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001202 451 - 1121937 I e dasNov3.JH578441 1140835 904 + 1446996 I a score=1407789.000000 s hg38.chrUn_KI270749v1 43209 132 + 158759 AGGTGAATTTAATAACAT-----------------------CTTGATATTTTCCACGATTACAG-TTTTATTTGGTAAAT-CTATAAAAGCACA--TCTTCTAAAGATAATAAATG-AA--TCTTGGAAATCTTGTAGGTAAAGGTAAATATTAGGATGCAT s panTro5.chr1 101869491 132 - 228573443 AGATGAATTTAATAACAT-----------------------CTTGATATTTTCCACTATTACAG-TTGTATTTGGTAGAT-CTTTAAATGCCCA--TCATCTAAAGATCATAAATG-AA--TCTTGGAAATCTTGTAGGTAAGGGTAAATATAAGGATGTAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108498755 132 - 162613886 AGATGAATTTAATAACAT-----------------------CTTGATATTTTCCTCTATTATAG-TTTTATTTGGTAAAT-CTTTAAATGCACA--TCATCTAAAGATAATAAATG-AA--TCTTGGAAATCTTGTAGGTAAGGGTAAATGTTAggatgcat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 22957 132 - 126596 AGATGAATTTAATAACAT-----------------------CTTGATATTTTCTACGATTACAG-TTTTATTTGGTAAAT-CTTTAAATGCACA--TCATCTAAAGATAATAAATG-AA--TCTTGGAAATCTTGTAGGTAAGGGTAAAGATTAGGATGCAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747435 131 + 99891981 AGATGAATTTAATAACAT-----------------------CTTGATATTTTCCACTATTATAA-TTTTATTTGGTAAAT-CTTTAAATGCACATTTCATCTAAAG---ATAAATG-AA--TCTTGGAAATCCTGTAGGTAAGGGTAAATATTAGGATGCAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444285 133 - 185818997 AGATGAATTTAATAACAT-----------------------CTTGATATTTTCCACTATTATAGTTTTTATTTGGTAAAT-CTTTATATGCACA--TCATCTAAAGATAATAAATG-AA--TCTTGGAAATCTTGTAGGTAAGGGTAAATATTAGGAGGcat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67273919 133 + 192294377 AGATGAATTTAATAAAAT-----------------------CTTGATATTTTCCACTATTATAGTTTTTATTTGGTAAAT-CTTTATATGCACA--TCATCTAAAGATAATAAATG-AA--TCTTGGAAATCTTGTAGGTAAGGGTAAATATTAGGAGGCAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2755966 133 + 3123512 AGATGAATTTAATAACAT-----------------------CTTGATATTTTCCACTATTATAGTTTTTATTTGGTAAAT-CTTTATATGCACA--TCATCTAAAGATAATAAATG-AA--TCTTGGAAATCTTGTAGGTAAGGGTAAATATTAGGAGGCAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476240 133 + 10077455 AGATGAATTTAATAACAT-----------------------CTTGATATTTTTCACTATTATAGTTTTTATTTGGTAAAT-CTTTATATGCACA--TCATCTAAAGATAATAAATG-AA--TCTTGGAAATCTCGTAGGTAAGGGTAAATATTAGGAGGCAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684250 133 + 127223203 AGATGAATTTAATAACAT-----------------------CTTGATATTTTCCACTATTATAATTTTTATTTGGTAAAT-CTTTATATGCACA--TCATCTAAAGATAATAAATG-AA--TCTTGGAAATCTTGTAGGTAAGGGTAAATATTAGGAGGCAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128437 133 - 1799296 AGATGAATTTAATAACAT-----------------------CTTGATATTTTCCACTATTATAGTTTTTATTTGGTATAT-CTTTATATGCACA--TCATCTAAAGATAATAAATG-AA--TCTTGGAAATCTTGTAGGTAAGGGTAAATATTAGGAGGcat i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727158 133 + 6934359 AGATGAATCTAATAACAT-----------------------CTTGATATTTTCCACTATTATAGTTTTTATTTGGTAAAT-CTTTATATGCACA--TCATCTAAAGATAATAAGTG-AA--TCTTGGAAATCTTTTAGGTAAGGGTAAATATTAGGAGGCAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087252 132 - 128169293 AGATGAATTTAATAAAAT-----------------------CTTGATATTTTTCACTATTAGAG-TTTTATTTGATAAATGCTTTATATGCACA--TCATCTATAGATAATAAATG-AA--TGTCAGAAGTCTTGTAGGTAAGGG-AAATATTAGAGTGCAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 707932 132 - 18371965 AGATGAATTTAATAAAAT-----------------------CTTGATATTTTTCACTATTAGAG-TTTCATTTGGTAAATGCTTTATATGCACA--TCATCTATAGATAATAAATG-AA--TCTTGGAAATCTTGTAGGTAAGGG-AAATATTAGAATGCAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368330 132 + 3566421 GGATGAGTTTAATAAAAT-----------------------CTTGATATTTTTCATTATTAGAG-TTTCATTTGGTAAATGCTTTATATGCACA--TCATCTATAGATAATAAATG-AA--TCTTGGAAATCTTGTAGGTAAGGG-AAATATTAGAATGTAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1870935 131 - 9267652 AGATGAATTTAATAAAAT-----------------------CTTGAT-TTTTTCTCTATTAGAG-TTTCATTTGGTAAATGCTTTATATGCACA--TCATCTGTAGATAATAAATG-AA--TCTTGGAAATCTTGTTGGTAAGGG-AAATATTAGAATGCAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701182 112 + 14340318 GAG----------------------------------------TAGTGTTTTCCACTA-TACAG-TTTGAGTAGGTAAATGCTTTATATACACT--TCATCTAGAGATATTAAAAGAAA--TTCCATAAATCTTATAAACATGAG----TATTAGAATGCTT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741268 155 - 55844845 GAGTTAGTTTAATAATACTTGATATTTAATATTTAGTGATATTTGATATTTTCCACTATCATAT-ATTTATTAGGTAAAT-CTATATACTCACA--TGATCTGAAGATATTAAATG-AA--CATATAGAATCTCATAGTCAAGGGTAACTGTTAGAATATAG i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1141739 135 + 1446996 AGATTAGTTTGTGAGTAT-----------------------CTTGGTATGTTTCACTATCATAC-CTTTGTTAGGTAAATATTTCATATGCAAA--TAATCTAAAGCTATTAAGTA-AAATTATTGGCAATCTTCTCAACAAGGATAAATATTAGGGTATAT i dasNov3.JH578441 I 904 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001202 451 - 1121937 I a score=119896.000000 s hg38.chrUn_KI270749v1 43341 21 + 158759 C----------------------CAATTACATTT-ACACAC----ACA s panTro5.chr1 101869623 25 - 228573443 C----------------------CAATTacattt-acacacacataca i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23089 25 - 126596 C----------------------cagttacattt-acacgcacataca i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747566 25 + 99891981 C----------------------CAATTacattt-acacacacacaca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444418 47 - 185818997 ccaattacatttacacacacatacaattacattt-acgcacacataca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274052 47 + 192294377 CCAATTACATTTacacacacatacaattacattt-acgcacacataca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756099 47 + 3123512 CCAATTACATTTacacacacatacaattacattt-acgcacacataca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476373 47 + 10077455 CCAATTACATTTacacacacatacaattacattt-acacacacataca i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684383 47 + 127223203 CCAATTACATTTacacacacatacaattacattt-acacacacataca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128570 25 - 1799296 c----------------------caattacattt-acacacacataca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727291 25 + 6934359 C----------------------CAATTACATTT-acacacacataca i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087384 21 - 128169293 ----------------------ACAATTACATTT-ACACACACA---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708064 21 - 18371965 ----------------------ACAATTACATTT-ACGCACACA---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368462 21 + 3566421 ----------------------ACGATTACATTT-ACACACACA---- i cebCap1.NW_016107540v1 C 0 I 30 s aotNan1.NW_018514471v1 1871066 21 - 9267652 ----------------------ACAGTTACATTT-ACACACACA---- i aotNan1.NW_018514471v1 C 0 I 32 s otoGar3.GL873564 12701294 12 + 14340318 ----------------------GCAACTATATTT-------------- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741423 24 - 55844845 ----------------------TCACTTACCTTTTACATACACACG-- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1141874 10 + 1446996 ----------------------ACAATTACAT---------------- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001202 451 - 1121937 I e panPan2.chr7 108498887 0 - 162613886 C a score=120166.000000 s hg38.chrUn_KI270749v1 43362 26 + 158759 GTTACATTTACACACACATACATGCA s panTro5.chr1 101869648 26 - 228573443 attatatttacacaaacatgcatgca i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23114 26 - 126596 gttacatttacaCACACATACATGCA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747591 26 + 99891981 attacgtttacacccacatacatgca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444465 26 - 185818997 attacatttacacacacatacatgca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274099 26 + 192294377 attacatttacacacacatacatgca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756146 26 + 3123512 attacatttacacacatatacatgca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476420 24 + 10077455 attacatttacacacacatacatg-- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684430 24 + 127223203 attacatttacacacacatacatg-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128595 24 - 1799296 attacatttacacacacatacatg-- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727316 26 + 6934359 attacatttacgcacgcatacatgca i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087405 8 - 128169293 ------------------TACATGCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708085 8 - 18371965 ------------------TACATGCA i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12701306 22 + 14340318 ----tatatacacacacacacagtta i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741447 18 - 55844845 --------CACACATGCACATATGCA i canFam3.chr18 C 0 I 8 s dasNov3.JH578441 1141884 16 + 1446996 ------TTTACACACACTCACA---- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001202 451 - 1121937 I e aotNan1.NW_018514471v1 1871087 32 - 9267652 I e cebCap1.NW_016107540v1 1368483 30 + 3566421 I e panPan2.chr7 108498887 0 - 162613886 C a score=19430.000000 s hg38.chrUn_KI270749v1 43388 3 + 158759 TAC s panTro5.chr1 101869674 3 - 228573443 cac i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23140 3 - 126596 TAC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747617 3 + 99891981 cac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444491 3 - 185818997 cac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274125 3 + 192294377 cac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756172 3 + 3123512 cac i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476444 3 + 10077455 cac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684454 3 + 127223203 cac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128619 3 - 1799296 cac i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727342 3 + 6934359 cac i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087413 3 - 128169293 CAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708093 3 - 18371965 CAC i saiBol1.JH378145 C 0 C 0 s tarSyr2.KE946558v1 1001653 3 - 1121937 tat i tarSyr2.KE946558v1 I 451 I 239 s otoGar3.GL873564 12701328 2 + 14340318 -aa i otoGar3.GL873564 C 0 I 1 s canFam3.chr18 51741473 3 - 55844845 TAA i canFam3.chr18 I 8 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e aotNan1.NW_018514471v1 1871087 32 - 9267652 I e cebCap1.NW_016107540v1 1368483 30 + 3566421 I e dasNov3.JH578441 1141900 0 + 1446996 C e panPan2.chr7 108498887 0 - 162613886 C a score=29772.000000 s hg38.chrUn_KI270749v1 43391 7 + 158759 A----GACTGA s panTro5.chr1 101869677 11 - 228573443 acgctcactga i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23143 7 - 126596 A----GACTGA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747620 11 + 99891981 acactcactga i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444494 11 - 185818997 acactcacTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274128 11 + 192294377 acactcactga i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756175 11 + 3123512 acactcacTGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476447 11 + 10077455 acactcactga i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684457 9 + 127223203 aca--cactga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128622 11 - 1799296 aCACTCACTGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727345 11 + 6934359 acactcactga i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087416 11 - 128169293 ACTCTGACTGa i calJac3.chr8 C 0 I 18 s saiBol1.JH378145 708096 11 - 18371965 ACTCTCACTGa i saiBol1.JH378145 C 0 I 38 s otoGar3.GL873564 12701331 7 + 14340318 ataccta---- i otoGar3.GL873564 I 1 C 0 s canFam3.chr18 51741476 6 - 55844845 ----AGACTA- i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001656 239 - 1121937 I e aotNan1.NW_018514471v1 1871087 32 - 9267652 I e cebCap1.NW_016107540v1 1368483 30 + 3566421 I e dasNov3.JH578441 1141900 0 + 1446996 C e panPan2.chr7 108498887 0 - 162613886 C a score=27883.000000 s hg38.chrUn_KI270749v1 43398 15 + 158759 TACACGTGTGtat--at s panTro5.chr1 101869688 11 - 228573443 tacaggtatg------c i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23150 15 - 126596 TACACGTGTGtat--at i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747631 11 + 99891981 tacacatatg------t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444505 13 - 185818997 TACACGTGTGTGT---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274139 13 + 192294377 tacacGTGTGTGT---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756186 13 + 3123512 TACATGTGTGTGT---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476458 13 + 10077455 tacacGTGTGTGT---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684466 13 + 127223203 tacacGTGTGTGT---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128633 13 - 1799296 TACACGTGTGTGT---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727356 15 + 6934359 tacacGTGTCTGTAT-- i colAng1.NW_012115910v1 C 0 I 1 s calJac3.chr8 108087445 13 - 128169293 tatatatatacac---- i calJac3.chr8 I 18 C 0 s saiBol1.JH378145 708145 13 - 18371965 tatatgtatatat---- i saiBol1.JH378145 I 38 C 0 s cebCap1.NW_016107540v1 1368513 13 + 3566421 tatgtgtgtatat---- i cebCap1.NW_016107540v1 I 30 C 0 s aotNan1.NW_018514471v1 1871119 13 - 9267652 TGTGTGTATATAT---- i aotNan1.NW_018514471v1 I 32 C 0 s otoGar3.GL873564 12701338 11 + 14340318 --tatgtgtgcat---- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741482 9 - 55844845 ----TTTGtttat---- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1141900 7 + 1446996 --AATATAT-------- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001656 239 - 1121937 I e panPan2.chr7 108498887 0 - 162613886 C a score=12376.000000 s hg38.chrUn_KI270749v1 43413 1 + 158759 a s panTro5.chr1 101869699 1 - 228573443 a i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23165 1 - 126596 a i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747642 1 + 99891981 a i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444518 1 - 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274152 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756199 1 + 3123512 A i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476471 1 + 10077455 A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684479 1 + 127223203 A i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128646 1 - 1799296 A i manLeu1.NW_012105809v1 C 0 C 0 s calJac3.chr8 108087458 1 - 128169293 a i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708158 1 - 18371965 a i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368526 1 + 3566421 a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871132 1 - 9267652 A i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701349 1 + 14340318 a i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741491 1 - 55844845 a i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1141907 1 + 1446996 A i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 666641 4517 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001656 239 - 1121937 I e colAng1.NW_012115910v1 1727371 1 + 6934359 I e panPan2.chr7 108498887 0 - 162613886 C a score=11404.000000 s hg38.chrUn_KI270749v1 43414 2 + 158759 ta s panTro5.chr1 101869700 2 - 228573443 ta i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23166 2 - 126596 ta i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747643 2 + 99891981 ta i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444519 2 - 185818997 TC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274153 2 + 192294377 TC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756200 2 + 3123512 TC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476472 2 + 10077455 TC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684480 2 + 127223203 TC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128647 2 - 1799296 TC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727372 2 + 6934359 TA i colAng1.NW_012115910v1 I 1 C 0 s rhiRox1.KN300005v1 671158 2 - 4311341 TC i rhiRox1.KN300005v1 I 4517 I 250 s rhiBie1.NW_016806392v1 1418806 2 + 4622379 TC i rhiBie1.NW_016806392v1 N 0 I 251 s calJac3.chr8 108087459 2 - 128169293 ca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708159 2 - 18371965 ta i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368527 2 + 3566421 ta i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871133 2 - 9267652 TA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701350 2 + 14340318 ta i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741492 2 - 55844845 ta i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1141908 2 + 1446996 TG i dasNov3.JH578441 C 0 C 0 e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001656 239 - 1121937 I e panPan2.chr7 108498887 0 - 162613886 C a score=1776802.000000 s hg38.chrUn_KI270749v1 43416 210 + 158759 tatatatatGAATTTACTAATTGATTTTAACTA-----ATA-------------------------------------------------------TTTATAAGAGCCAGTTGGAT--TGATATATATTGTTGAACCTG-AAAAATATTTATTATATACATG---------TTTAAAATACACACAGAAATAAATAGTAATTGCACCAGGCATTTGAAACTGTACTAAAATATAA------GCTGTGAACATTTTGTGATCA------------TTACAAATTCTTACACTGAATAAAT----A s panTro5.chr1 101869702 199 - 228573443 taaatgcaTGAATTTACCAATTGATTTTAACTA-----ATA-------------------------------------------------------TTTATAAGAGCCTGTAGGAT--TGATATATATTGTTGAACCTG-AAAAATATTTATTATATACATG---------TTTAAAATACACAAAGAAATAAATAGTAATTGCACTAGGCATTTGAAACTGTACTTAAATATAA------GC-----------TGTGATCA------------TTACAAATTCTTACACTGAATAAAT----A i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23168 210 - 126596 tatatatatGAATTTACTAATTGATTTTAACTA-----ATA-------------------------------------------------------CTTATAAGAGCCAGTTGGAT--TGATATATATTGTTGAACCTG-AAAAATATTTATTATATACATG---------TTTAAAATACACACAGAAATAAATAGTAATTGCACTAGGCTTTTGAAACTGTACTAAAATATAA------GCTGTGAACATTTTGTGATCA------------TTACAAATTCTTACACTGAATAAAT----A i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747645 211 + 99891981 tatatacaTGAATTTACTAATTGATTTTAACTAATATTATA-------------------------------------------------------TTTATAAGAGCCAGTAGGTT--TGATATATATTGTTTAACCTG-AAAAATATTTATTATATACATG---------TTTAAAATACACAAAGGAATAAATAGTAATTAAACTAGGCATATGAAACTCTACTAAAATATAA------GCTGTGAACATTTTGTGATCA------------TTATAAATTCTTATGCTG----AAT----A i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444521 215 - 185818997 TATATACATGAATTTACTAATTGATTTCAACTAATATTATA-------------------------------------------------------TTTATAAAAGCCAGTAGGTT--TGATATATATTGTTGAACCTG-AAAAATATTTATTATATACATG---------TTTAAAATACACAAAGAAATAAATAGTAATTAAACTAGGCATTTAAAACCCTACTAAAATATAA------GTTGTGAACATTTTGTGATCA------------TTATAAGTTCTTACACTGAATAAat----a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274155 215 + 192294377 TATATACATGAATTTACTAATTGATTTCAACTAATATTATA-------------------------------------------------------TTTATAAAAGCCAGTAGGTT--TGATATATATTGTTGAACCTG-AAAAATATTTATTATATACATG---------TTTAATATACACAAAGAAATAAATAGTAATTAAACTAGGCATTTAAAACCCTACTAAAATATAA------GTTGTGAACATTTTGTGATCA------------TTATAAGTTCTTACACTGAATAAAT----A i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756202 211 + 3123512 TATATACATGAATTTACTAATTGATTTCAACTTATATTATA-------------------------------------------------------TTTATAAAAGCCAGTAGGTT--TGATATATATTGTTGAACCTG-AAAAATATTTATTATATACATG---------TTTAAAATACACAAAGAAATAAATAGTAATTAAACTAGGCATTTAAAACCCTACTAAAATATAA------GTTGTGAACATTTTGTGATCA------------TTATAAGTTCTTACACTG----AAT----A i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476474 211 + 10077455 TATATACATGAATTTACTAATTAATTTCAACTAATATTATA-------------------------------------------------------TTTATAAAAGCCAGTAGGTT--TGATATATATTGTTGAACCTG-AAAAATATTTATTATATACATG---------TTTAAAATACACAAAGAAATAAATAGCAATTAAACTAGGCATTTAAAACCCTACTAAAATATAA------GTTGTGAACATTTTGTGATCA------------TTATAAGTTCTTACACTG----AAT----A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684482 210 + 127223203 TATATACATGAATTTACTAATTGATTTCAACTAATATTATA-------------------------------------------------------TTTATAAAAGCCAGTAGGTT--TGCTATATATTGTTGAACCTG-AAAAATATTTATTATATACATT---------TTTAAAATACACACAAAAA-AAATAGTAATTAAACTAGGCATTTAAAACCCTACTAAAATATAA------GTTGTGAGCATTTTGTGATCA------------TTATAAGTTCTTACACTG----AAT----A i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128649 215 - 1799296 TATATACATGAATTTACTAACTGATTTCAACTAATATTATA-------------------------------------------------------TTTATAAAAGCCAGTAGGTT--TGATATATATTGTTGAACCTG-AAAAATATTTATTATATACATG---------TTTAAAATACACAAAGAAATAAATAGTAATTAAACTAGGCATTTAAAACCCTACTAAAATATAA------GTTGTGAACATTTTGTGATCA------------TTATAAGTTCTTACACTGAATAAAT----A i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727374 214 + 6934359 --TATACATGAATTTACTACTTGATTTCAACTAATGTTATA-------------------------------------------------------TTTATAAAAGCCAGTAGGTT--TGATATATATTGTTGAACCTGAAAAAATATTTATTATATACGTG---------TTTAAAATACACACAGAAATAAATAGTAATTAAACTAGGCATTTAAAACCCTACTAAAATATAA------GTTGTGAACATTTTGTGATCA------------TTATAAGTTCTTACACTGAATAAAT----A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087461 210 - 128169293 cacacacatGAATTTACTAATTGATTTCAACTAATTATATA-------------------------------------------------------TTTATAAGAGCCCGTAGGTTTATGATACATATTGTTGAACCTG-AAAAACATTTATTATATGCATG---------TTTAAAATACACAAAGAAAT--GTTATAATTAAACTAAGCATTTAAAA--CGACTAAAGTGTAA------GTTGTGAACATTTTAGGATCA------------TTATTAATTCT---ACTGaataaat----a i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708161 214 - 18371965 CACACACATGAATTTACTAATTGATTTCAACTAATTATATA-------------------------------------------------------TTTATAAGAGCCAGTAGGTTTATGATATATATTGTTGAACCTG-TAAAACATTTATTATATACATG---------TTTAAAATACACAAAAAAATAAGTTATAATTAAACTAGGCATTTAAAACTCTACTAAAATATAA------GTTGTGAGCATTTTATGATCA------------TTATTAATTCT---ACTGAATAAAT----A i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368529 222 + 3566421 tata-------------------------------tatataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------TAGGCTTATAATATATATTGTTGAACCTG-AAAAACATTTATTATATACGTG---------TTTAAAATACACAAAGAAAT--GTTATAATTAAACTAGGCATTTAAAAATCTACTAAAATATAA------GTTGTAAACATTTTATGAATA------------ATATTAATTCT---ACTGAATAAAt----a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871135 208 - 9267652 CACACACATGAATTTACCAATTGATTTCAACTAATTATATA-------------------------------------------------------TTTATAAGAGCCAGTTGGTTTATGATATATATTGTTGAACCTG-AAAAACATTTATTATATACATG---------TTTAAAATACACAAAGAAAT--ATTATAATTAAACTAGGCATTTAAAACTCTACTAAAATATAA------GTTGTGAACATCTTATGATCA------------TTATTGATTCT---ACTG----AAT----A i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701352 205 + 14340318 cgtatacataAAATTAATAGTTGATTTCAATTACTACTACA-------------------------------------------------------TTTATAAGAATGAAAAAATTTATGAGATGTATTATTGAATATG-TAAAATATTTACTAAA--CATA---------TTCAAAATATACCAAAAAATTAATTGTAATTAA-----TCATTTAAAACCTTTCTAAAACTTGC------TTT------AATTTGTGACTA------------TTAAA---TGTTACAGTAGGTGAATATCAA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741494 209 - 55844845 taaatatacaatttt------taaatttaatta-----ata--------------------------------------------------------ttaGAAGAGCCCAAAAGTTTATGATACATGTTGTTCAACATG-TAAAATATATGTTATGTCaata---------tttatcatata--aaaaaataaatcataattaaGCTGAACTTTAAATAACCtaataatatacaa------ttt------attttgtgattattttatttttgtttataaattCTGGCACTGGGTAAAT----A i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1141910 229 + 1446996 CCCAGGTATGAATTTACTAATTGATTTTAACCAATATTACA-------------------------------------------------------TTCCTAAGAGCCAGCAGGTTTATGGTATATATTGTTGAACTTG-TAAAATTTATAGTCTGTATGTATATTTATACTTTAAAATATACAAAGAAA---ACCataattaaaataaacattttaaactttattaatataaaatttaaCGTTGTGAATATT-TATGGTCA-----------TTTGCTCAATCTGATATTGGATGGAT----G i dasNov3.JH578441 C 0 I 273 e rhiRox1.KN300005v1 671160 250 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e rhiBie1.NW_016806392v1 1418808 251 + 4622379 I e tarSyr2.KE946558v1 1001656 239 - 1121937 I e panPan2.chr7 108498887 0 - 162613886 C a score=83502.000000 s hg38.chrUn_KI270749v1 43626 14 + 158759 TTTTTA--TTTTTACA s panTro5.chr1 101869901 14 - 228573443 TTTTTA--TTTTTATA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23378 14 - 126596 TTTTTA--TTTTTACA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747856 14 + 99891981 TTTTTA--TTTTTATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444736 14 - 185818997 tttata--tttttata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274370 14 + 192294377 TTTATA--TTTTTATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756413 14 + 3123512 TTTATA--TTTTTATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476685 15 + 10077455 TTTATA-TTTTTTATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684692 15 + 127223203 TTTATA-TTTTTTATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128864 16 - 1799296 TTTATATTTTTTTATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727588 15 + 6934359 TTTTTA-TTTTTTATG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087671 14 - 128169293 ttttta--tttttatg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708375 14 - 18371965 TTTTCA--TTTTTACG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368751 14 + 3566421 ttttta--tttttatg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871343 14 - 9267652 TTTTTA--TTTTTATG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701557 14 + 14340318 TTTTTG--TTTTCATT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741703 2 - 55844845 TT-------------- i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 671160 250 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e rhiBie1.NW_016806392v1 1418808 251 + 4622379 I e tarSyr2.KE946558v1 1001656 239 - 1121937 I e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=5942.000000 s hg38.chrUn_KI270749v1 43640 4 + 158759 AT-----AT s panTro5.chr1 101869915 1 - 228573443 A-------- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23392 4 - 126596 AT-----AT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747870 9 + 99891981 ATATTAAAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444750 4 - 185818997 at-----at i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274384 4 + 192294377 AT-----AT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756427 4 + 3123512 AT-----AT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476700 4 + 10077455 AT-----AT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684707 4 + 127223203 AT-----AT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128880 4 - 1799296 AT-----AT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727603 4 + 6934359 AT-----AT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087685 4 - 128169293 at-----at i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708389 4 - 18371965 AT-----AT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368765 4 + 3566421 at-----at i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871357 4 - 9267652 AT-----AT i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 1001895 4 - 1121937 -----AAAT i tarSyr2.KE946558v1 I 239 I 139 s otoGar3.GL873564 12701571 4 + 14340318 -----AAAT i otoGar3.GL873564 C 0 I 1 e rhiRox1.KN300005v1 671160 250 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e rhiBie1.NW_016806392v1 1418808 251 + 4622379 I e canFam3.chr18 51741705 0 - 55844845 C e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=75107.000000 s hg38.chrUn_KI270749v1 43644 13 + 158759 TAAT-------ATGTTTGAT s panTro5.chr1 101869916 13 - 228573443 TAAT-------ATGTTTGAT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23396 13 - 126596 TAAT-------ATGTTTGAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747879 13 + 99891981 TAAT-------ATGTTCAAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444754 13 - 185818997 taat-------atgtttgat i rheMac8.chr3 C 0 I 2 s macFas5.chr3 67274388 13 + 192294377 TAAT-------ATGTTTGAT i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 2756431 13 + 3123512 TAAT-------ATGTTTGAT i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 2476704 11 + 10077455 TA---------ATGTTTGAT i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 5684711 13 + 127223203 TAAT-------ATGTTTGAT i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 1128884 11 - 1799296 TA---------ATGTTTGAT i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 1727607 13 + 6934359 TAAT-------ATGTTTGAT i colAng1.NW_012115910v1 C 0 I 2 s calJac3.chr8 108087689 20 - 128169293 taattgataatatGTTTGAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708393 18 - 18371965 TAATTGATA--ATGTTTGAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368769 20 + 3566421 ttattgataatatgtttgac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871361 20 - 9267652 TAATTGATAATATGTTTGAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701576 20 + 14340318 TAATCAGTAATATGTTTGGT i otoGar3.GL873564 I 1 C 0 s canFam3.chr18 51741705 3 - 55844845 -AAT---------------- i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 671160 250 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e rhiBie1.NW_016806392v1 1418808 251 + 4622379 I e tarSyr2.KE946558v1 1001899 139 - 1121937 I e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=19197.000000 s hg38.chrUn_KI270749v1 43657 2 + 158759 AT s panTro5.chr1 101869929 2 - 228573443 AC i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23409 2 - 126596 AC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747892 2 + 99891981 AC i nomLeu3.chr17 C 0 I 2 s rheMac8.chr3 133444769 2 - 185818997 at i rheMac8.chr3 I 2 C 0 s macFas5.chr3 67274403 2 + 192294377 AT i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 2756446 2 + 3123512 AT i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 2476717 2 + 10077455 AT i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 5684726 2 + 127223203 AT i chlSab2.chr21 I 2 C 0 s manLeu1.NW_012105809v1 1128897 2 - 1799296 AT i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 1727622 2 + 6934359 AT i colAng1.NW_012115910v1 I 2 C 0 s rhiRox1.KN300005v1 671410 2 - 4311341 at i rhiRox1.KN300005v1 I 250 I 258 s rhiBie1.NW_016806392v1 1419059 2 + 4622379 AT i rhiBie1.NW_016806392v1 I 251 I 258 s calJac3.chr8 108087709 2 - 128169293 AC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708411 2 - 18371965 AC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368789 2 + 3566421 at i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871381 2 - 9267652 AC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701596 2 + 14340318 AT i otoGar3.GL873564 C 0 I 1 e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1001899 139 - 1121937 I e canFam3.chr18 51741708 0 - 55844845 C e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=125594.000000 s hg38.chrUn_KI270749v1 43659 16 + 158759 CTGTGTAC--ATTTTTTA s panTro5.chr1 101869931 16 - 228573443 ATGTGTAC--ATTTTTTA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23411 16 - 126596 CTGCCTAT--ATTTTTTA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747896 16 + 99891981 ATGTGTAC--AATTTTTA i nomLeu3.chr17 I 2 C 0 s rheMac8.chr3 133444771 16 - 185818997 atgtgtac--atttttta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274405 16 + 192294377 ATGTGTAC--ATTTTTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756448 16 + 3123512 ATGTGTAC--ATTTTTTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476719 16 + 10077455 ATGTGTAC--ATTTTTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684728 16 + 127223203 ATGTGTAC--ATTTTTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128899 16 - 1799296 ATGTGTAC--ATTTTTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727624 16 + 6934359 ATGTGTAC--ATTTTTTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087711 18 - 128169293 ATGTGTATACAGTTTTCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708413 16 - 18371965 GTGTGTAT--AGTTTTTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368791 16 + 3566421 gtgtgtat--agttttta i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871383 16 - 9267652 ATGAGTAC--AGTTTTTA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701599 16 + 14340318 TTGTGTCC--ATTTTTAA i otoGar3.GL873564 I 1 I 1 e rhiRox1.KN300005v1 671412 258 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66877680 604 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e rhiBie1.NW_016806392v1 1419061 258 + 4622379 I e tarSyr2.KE946558v1 1001899 139 - 1121937 I e canFam3.chr18 51741708 0 - 55844845 C e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=8790.000000 s hg38.chrUn_KI270749v1 43675 1 + 158759 C s panTro5.chr1 101869947 1 - 228573443 A i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23427 1 - 126596 C i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747912 1 + 99891981 C i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444787 1 - 185818997 c i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274421 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756464 1 + 3123512 C i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476735 1 + 10077455 C i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684744 1 + 127223203 C i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128915 1 - 1799296 C i manLeu1.NW_012105809v1 C 0 C 0 s nasLar1.chr3 66878284 1 + 179790006 C i nasLar1.chr3 I 604 I 240 s colAng1.NW_012115910v1 1727640 1 + 6934359 C i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087729 1 - 128169293 C i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708429 1 - 18371965 C i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368807 1 + 3566421 c i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871399 1 - 9267652 C i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 671412 258 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e rhiBie1.NW_016806392v1 1419061 258 + 4622379 I e tarSyr2.KE946558v1 1001899 139 - 1121937 I e otoGar3.GL873564 12701615 1 + 14340318 I e canFam3.chr18 51741708 0 - 55844845 C e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=770576.000000 s hg38.chrUn_KI270749v1 43676 112 + 158759 GATGTG-----TTATTTTATTTTTGTCAT---AGAGTCTTgtcatgcataataacatttcagtcaaagatgga-ttacaaatacaaaagtggt-ccatgagattataatacatatttttaca s panTro5.chr1 101869948 108 - 228573443 AATGTA----------TAATTTTTGTCAT---AGagtcatgtcatgtataataatatttcagtcaaagatgga-ttacatatacaaaagtggtcccatgagattataatacatatttttaca i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23428 109 - 126596 AATGTG-----TTATTTTATTTTTGTCAT---TGagtcatgtcatgcataataacatt----tcaaagatgga-ttacatatacaaaagtggtcccatgagattataatacatatttttaca i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55747913 115 + 99891981 TATTTG-----TTATTTTATTTTTGTCAT-ACAGGgtcatgtcatgcataataacatttcagtcaaagatgga-ttacatatacaaaagtggtcccatgagattataatacatatttttaca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444788 107 - 185818997 ----ta-----ttattttatttttGTCGT-ATAGagtcatgtcgtgcataataacatt----tcaaagataga-atacatatacaaaagtgatcccatgagattataatacatagttttaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274422 107 + 192294377 ----TA-----TTATTTTATTTTTGTCGT-ATAGagtcatgtcgtgcataataacatt----tcaaagataga-atacatatacaaaagtgatcccatgagattataatacatagttttaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756465 107 + 3123512 ----TA-----TTACTTTATTTTTGTCGT-ATAGagtcatgtcgtgcataataacatt----tcaaagataga-atacatatacaaaagtgatcccatgagattataatacatagttttaca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476736 103 + 10077455 ----TA-----TTATTTTA-TTTTGTCAT-ATAGagtcatgtcgtgc---ataacatt----tcaaagataga-atacatatacaaaagtgatcccatgagattataatacatagttttaca i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684745 111 + 127223203 TGTTTA-----TTATTTTATTTTTGTCAT-ATAGagtcatatcgtgcataataacatt----tcaaagatgga-atacatatacaaaagtgatcctatgagattataatacatagttttaca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1128916 107 - 1799296 ----TA-----TTATTTTATTTTTGTCAT-ATAGagtcatgtcgtgcataataacatt----tcaaagataga-atacatatacaaaagtgatcccatgagattataatacatagttttaca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727641 111 + 6934359 TATTTA-----TTATTTTATTTTTGTCAT-ATAGagtcatgtcgtgcataataacatt----tcaaagatgga-atacatatacaaaagtagtcccatgagattataatacatagttttaca i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087730 110 - 128169293 tatttattattttattttatttttGTCAT-ACAGagtcatgtcgtgcataataaca-ttaggtcaaagatgga-ctacatatatataaa---------ggtattataacagatatttttaca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708430 115 - 18371965 TATTTA-----TTATTTTATTTTTGTCAT-ACAGagtcatgtcgtgcataataacatttcagtcaaagatgga-ctacatatacaaaagtggttctgtgagattataatacacatttttaca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368808 113 + 3566421 tattta-----t--ttttatttttgttAT-ACAGagtcatgtcatgcataataacatttcagtcaaagatgga-ctacatatacaaaagtggtcccatgagattgtaatacatatttttaca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871400 112 - 9267652 TATTTA--------TTTTATTTTTGTCAT-ACAGagtcatgtcatgcataataacatttcagtcaaagatgga-ctacatatacaaaagtggtcccatgagattataatatgtatttttaca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701616 97 + 14340318 TATTTA-----TTATTGTATTTTTGTTTT-ATACAATGATATT--------Tgacatttcagtcgaagttggatttatatgtgtaaaagtgaccctgtcagattctgatgc----------- i otoGar3.GL873564 I 1 C 0 s canFam3.chr18 51741708 27 - 55844845 --------------TTTTATTTGTATAGTAATAAATCCATA--------------------------------------------------------------------------------- i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 671412 258 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66878285 240 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e rhiBie1.NW_016806392v1 1419061 258 + 4622379 I e tarSyr2.KE946558v1 1001899 139 - 1121937 I e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=12376.000000 s hg38.chrUn_KI270749v1 43788 1 + 158759 t s panTro5.chr1 101870056 1 - 228573443 t i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23537 1 - 126596 t i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55748028 1 + 99891981 t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444895 1 - 185818997 t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274529 1 + 192294377 t i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756572 1 + 3123512 t i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476839 1 + 10077455 t i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684856 1 + 127223203 t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1129023 1 - 1799296 t i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727752 1 + 6934359 t i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087840 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708545 1 - 18371965 t i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368921 1 + 3566421 t i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871512 1 - 9267652 t i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 1002038 1 - 1121937 t i tarSyr2.KE946558v1 I 139 I 26434 s otoGar3.GL873564 12701713 1 + 14340318 t i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 671412 258 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66878285 240 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e rhiBie1.NW_016806392v1 1419061 258 + 4622379 I e canFam3.chr18 51741735 0 - 55844845 C e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=1026122.000000 s hg38.chrUn_KI270749v1 43789 135 + 158759 acttttctacgtttaagtatgtttagatacataacctcttaccactgtgttcttattgcctgcagtattcagtacagtaaggtagtacacaggtttgtagcctgggagagagaggctataccatataacctagac s panTro5.chr1 101870057 134 - 228573443 acttttctatgtttaagtatgtttacatacataaactcttaccactgtgttcttattgcctgcagtattcagtatatt-atgtagtacacaggtttgtagcctaggatagagaggttataccatataacctaaac i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23538 135 - 126596 acttctctacgattaagtgtgtttaggtacataacctcttaccactgtgttcttattgcctgcagtattcagtacagtaatgtagtacacagctttgtagcctgggagagagaggctataccatataacctagat i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55748029 135 + 99891981 acttttctacatttaaatatgttcagatacataaactcttaccactgtgttctaattgccagcagtattcagtacagtaatgtagtatgcaggtttgtagcctaggagagagaggctataccatataacctagac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133444896 132 - 185818997 acttttcta---ttaaatgtgtttagatacataaactcttaccattgtattctaattgcctgcagcatttagtacagtaatgtagtacacaggtttgtagcctaggagagggaggctataccatatcacctagac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274530 132 + 192294377 acttttcta---ttaaatgtgtttagatacataaactcttaccattgtattctaattgcctgcagcatttagtacagtaatgtagtacacaggtttgtagcctaggagagggaggctataccatatcacctagac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756573 132 + 3123512 acttttcta---ttaaatgtgtttagatacataaactcttaccattgtattctaattgcctgcagcatttagtacagtaatgtagtacacaggtttgtagcctaggagagggaggctataccatatcacctagac i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476840 132 + 10077455 acttttcta---ttaaatgtgtttagatacataaactcttaccattgtattctaattgcctgcagcatttagtacagtaatgtagtacacaggtttgtagcctaggagagggaggctataccatatcacctagac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5684857 132 + 127223203 acttttcta---ttaaatgtgtttagatacataaacccttaccattgtattctaattgcctgcagcatttagtacagtaatgtactacacaggtttgtagcctaggagagggaggctataccacatcacctagac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1129024 132 - 1799296 acttttcta---ttaaatgtgtttagatacataaactcttaccattgtattctaattgcctgcagcatttagtacagtaatgtagtacacaggtttgtagcctaggagagggaggctataccatatcacctagac i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1727753 132 + 6934359 acttttctg---ttatgtgtgtttagatacataaactcttaccattgtattctaattgcctgcagcatttagtacagtaatgtagtacacaggtttgtagcctaggagagggagactataccatatcacctagac i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108087841 134 - 128169293 tcttttccatgtttaaatatgcttagatacacaaactcttaccattgtgttctaattgcctgcagtattcagtagagtaatgtagt-cacaggtttgtagcctaggagcgatggggcataccacataacctagac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708546 135 - 18371965 tcttttctatgtttaaatattcttagatacatagactcttaccattgtgttctaactgcctacagtactcagtagaggaatgtagtccacaggtttgtagcctaggagcgatagggcataccacacaacctagac i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1368922 135 + 3566421 tcttttctgtgtttaaatatgcttaaatacacaaactcttaccattgtgttctaattgcctacagtattcagtagaggaatgtagcccacaggtttgtagcccaggagtgatagggcataccacataacctagac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871513 135 - 9267652 tcttttctatgtttaaatatgcttagatacacaaactcttaccattatgttctaattccctacagtattcagtagagtaatgtagtccacaggtttgtagcctaggagtgatagggcatagtacataacctagac i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701714 112 + 14340318 ccttttctatgtttgaatgcatttaagtacaccagtactcaccatggtgctgtagtggccg--agtctccaggacagcaatcgacaacacaggtcggtagcccag---------------------agcccagtg i otoGar3.GL873564 C 0 I 1 s canFam3.chr18 51741735 35 - 55844845 ------------------ATATGTAGGTGCATGTGCTTTCACTATT-TATTTTA--------------------------------------------------------------------------------- i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 671412 258 - 4311341 I e papAnu3.chr3 58144279 6235 + 180432695 I e nasLar1.chr3 66878285 240 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e rhiBie1.NW_016806392v1 1419061 258 + 4622379 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=9536.000000 s hg38.chrUn_KI270749v1 43924 1 + 158759 a s panTro5.chr1 101870191 1 - 228573443 g i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23673 1 - 126596 g i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55748164 1 + 99891981 g i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133445028 1 - 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274662 1 + 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756705 1 + 3123512 a i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2476972 1 + 10077455 a i cerAty1.NW_012000909v1 C 0 C 0 s papAnu3.chr3 58150514 1 + 180432695 a i papAnu3.chr3 I 6235 C 0 s chlSab2.chr21 5684989 1 + 127223203 a i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1129156 1 - 1799296 a i manLeu1.NW_012105809v1 C 0 C 0 s nasLar1.chr3 66878525 1 + 179790006 a i nasLar1.chr3 I 240 C 0 s colAng1.NW_012115910v1 1727885 1 + 6934359 a i colAng1.NW_012115910v1 C 0 C 0 s rhiRox1.KN300005v1 671670 1 - 4311341 a i rhiRox1.KN300005v1 I 258 I 912 s rhiBie1.NW_016806392v1 1419319 1 + 4622379 a i rhiBie1.NW_016806392v1 I 258 N 0 s calJac3.chr8 108087975 1 - 128169293 a i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 708681 1 - 18371965 a i saiBol1.JH378145 C 0 I 2 s cebCap1.NW_016107540v1 1369057 1 + 3566421 a i cebCap1.NW_016107540v1 C 0 I 2 s aotNan1.NW_018514471v1 1871648 1 - 9267652 a i aotNan1.NW_018514471v1 C 0 I 2 s otoGar3.GL873564 12701827 1 + 14340318 g i otoGar3.GL873564 I 1 C 0 e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51741770 0 - 55844845 C e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=11849.000000 s hg38.chrUn_KI270749v1 43925 1 + 158759 t s panTro5.chr1 101870192 1 - 228573443 t i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23674 1 - 126596 t i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55748165 1 + 99891981 t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133445029 1 - 185818997 t i rheMac8.chr3 C 0 I 2 s macFas5.chr3 67274663 1 + 192294377 t i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 2756706 1 + 3123512 t i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 2476973 1 + 10077455 t i cerAty1.NW_012000909v1 C 0 I 2 s papAnu3.chr3 58150515 1 + 180432695 t i papAnu3.chr3 C 0 I 22304 s chlSab2.chr21 5684990 1 + 127223203 t i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 1129157 1 - 1799296 t i manLeu1.NW_012105809v1 C 0 I 2 s nasLar1.chr3 66878526 1 + 179790006 t i nasLar1.chr3 C 0 I 1717 s colAng1.NW_012115910v1 1727886 1 + 6934359 t i colAng1.NW_012115910v1 C 0 I 2 s calJac3.chr8 108087978 1 - 128169293 t i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 708684 1 - 18371965 t i saiBol1.JH378145 I 2 C 0 s cebCap1.NW_016107540v1 1369060 1 + 3566421 t i cebCap1.NW_016107540v1 I 2 C 0 s aotNan1.NW_018514471v1 1871651 1 - 9267652 t i aotNan1.NW_018514471v1 I 2 C 0 s otoGar3.GL873564 12701828 1 + 14340318 c i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 671671 912 - 4311341 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51741770 0 - 55844845 C e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=994873.000000 s hg38.chrUn_KI270749v1 43926 122 + 158759 ggtaggctgtacaatctaggtgtttgtaatattccctgtgatgtttgcaaaatgatgaaattgcctatggatgcatctgttagaacgtatccctatcattcagtgatgtgtggctgTACTAA s panTro5.chr1 101870193 122 - 228573443 ggtaggctgtacaaactaggtgtttgtaatattctctctgacgtttgcaaaatgatgaaattgcctatggatgcatctgttagaacgtatccctgtcattcagtgatgcgtgactgTGCTAA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23675 122 - 126596 ggtaggctgtacaatctatgtgtttgtaatattctctgtgatgcttgcaaaatgatgaaattgcctatggatacatctcttagaacgtatccctatcattcagtgatgtgtgactgTACTAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55748166 121 + 99891981 ggtaggctgtacaatctaggtgtttgtaatattctctctgatgtttgcaaaatgatgaaattgtctatggatgcatctcgtagaacata-ccctatcattcagtgacgtgtgattgTACTAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133445032 122 - 185818997 ggtaggctgtacaatctacgtgtttgtaatattctctctgatgtttgcaaaatgatgaaattacctatggatgcagctcttagaatgtatccccatcattcagcgatgtgtgactgTACTAA i rheMac8.chr3 I 2 C 0 s macFas5.chr3 67274666 122 + 192294377 ggtaggctgtacaatctacgtgtttgtaatattctctctgatgtttgcaaaatgatgaaattacctatggatgcagctcttagaatgtatccccatcattcagcgatgtgtgactgTACTAA i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 2756709 122 + 3123512 ggtaggctgtacaatctacgtgtttgtaatattctctctgatgtttgcaaaatgatgaaattacctatggatgcagctcttagaatgtatccccatcattcagcgatgtgtgactgTACTAA i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 2476976 122 + 10077455 ggtaggctgtacaatctacgtgtttgtaatattctctctgatgtttgcaaaatgatgaaattgcctatggatgcagctcttagaacgtatccccatcattcagcgatgtgtgactgTACTAA i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 5684993 122 + 127223203 gttaggctgtacaatctaggtgtttgtaatattctctctgatgtttgcgaaatgatgaaattgcctacggatgcagctcttagaacatatccccatcattcagtgatgtgtgactgTACTAA i chlSab2.chr21 I 2 C 0 s manLeu1.NW_012105809v1 1129160 122 - 1799296 ggtagactgtacaatctacgtgtttgtaatattctctctgatgtttgcaaaatgatgaaattgcctatggatgcagctcttagaacatatccccatcattcagcgatgtgtgactgTACTAA i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 1727889 122 + 6934359 ggtaggctgtacaatctaggtgtttgtaatattctctctgatgtttgcaaaatgatgaaattgcctatggatgaagctcttagaacatatccccatcattcagtgatgtgtggctgTACTAA i colAng1.NW_012115910v1 I 2 C 0 s calJac3.chr8 108087979 118 - 128169293 ggtgggctgtacaatctaggtgcttgtaatattctctc---tgtttgcaaaatgctgaaatttcctgtggctgcatctcttagaacatatccccatcattcagtgatctgtgcctgTACTA- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708685 121 - 18371965 ggtgggctctacaacctaggtgcttgtaatgttctctctgttgtttgcaaaatgatgaaatttcctgtggctgcatctcttagaacatattcccatcattcagtgatgtgtgCTTGTACTA- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1369061 121 + 3566421 ggtgggatgtacaacctacgtgcttgtaatattctctctgttgtttgcaaaatgatgaaatttcctgtggctgcatctcttagaacatgtccccatcattcagtgatgtgtgcctgTACTA- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871652 121 - 9267652 ggtgggttgtacaatctaggtgcttgtaatattctctctgttgtttgcaaaatgattaaatttcctgtggctgcatctcttagaacatatccccatcattcagtgatgcgtgcctgTACTA- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701829 113 + 14340318 tgcaggctgtgcca--tgctttgttgaagttcactctctgatgttcacacggccatgacatcgtctaaggatgcatttctcagaacctgtccccattgttaagtgatgtgtgact------- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741770 17 - 55844845 --------------------TCTTTGTTATAT-------------------------------------------------------------------------------------ATTAA i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 671671 912 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e dasNov3.JH578441 1142139 273 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=4567494.000000 s hg38.chrUn_KI270749v1 44048 497 + 158759 AATGCTCAATGTAAGTTTCAATGCCCTCCATAAAACTGTTGTACTG------TGAAATACAA---ATCTCTC-----ACCCATGGCCTGA--ATATGTTTGCAAACTAAGCAGAT-CATGGGAAGGAGAATGTGCTGGCATCGCTGGGATGAT----TTTCTCACACTACATGAATAATATCTACAGACTTAGTGCATATGAGCCACTTGCATAGAGTTAAAGTAGGCATCTCTTTGCTGGGAAATTTATCAAATGGGAGTATGAAGTGTTTTTAAAAGATAC-TTGTTTGTT---------------------------TGTAGCTGGTAGGCAT-------AC-----AGTGGCTCATGGCAGTGGTTAA-----------------------GGTTGCTAAGATTTGGTGGAAGAAGGCAAAATGAAATGGCCACTTATATGGTATATGGTATATGGATCACTTGTTTC-TGTTGA---G---TTACAGACTCAGCTGGCTATTTCTCCCAATGTTAGTTATTTGGAG-------AAAAAAAACGTGATG------GTAA--TTT--TGGAGTAACAAATACAATATTTGATGAAAGCAAAT s panTro5.chr1 101870315 490 - 228573443 AATGCTAAATCTAAGTTTCAATGACCTCCATAAAATTGTTGTACTG------TGAAATACAA---ATCTCTC-----ACCTACGGCCTGA--ATATGTTTGCAAACTAAGCAGAT-AATGGGAAGGAGAATGTGCTGGCATCGCAGGGATGAT----CTTCTCACACTACATGAATAATATCTCCAGACTTTGTGAATATGAGCCACTTGCATAGAGTTAAAGTAAGCATCTCTTTGCTGGGAAATTTATCAAATGGGAGTATGAAGTGTTTTTAAAAGATAC-TTGTTTGTT---------------------------TGTAGCTGGTAGGCCT-------AC-----AGTGGCTCATGGCAATGGTTGA-----------------------GGTTGCTAAGATTTGGTGGAAGAAGGCAAAATGAAATGGCCACT-------TATATGGTATATGGATCACTTGTTTC-TGTTGA---G---TTACAGATTCAGCTGGCTATTTCTCCCAATGTTAGTTATTTGGAT-------AAAAGAAACATGATA------GTAA--TTT--TGGGATAACAAATACAATATTTGATGAAAGCAAAT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 23797 499 - 126596 AATGCTCAATGTAAGTTTCATTGTCCTCCATAAAATTGTTGTACTG------TGAAATACAA---ATCTGTC-----ACCCATGGCCTGA--ATATGTTTCCAAACTAAGCAGAT-CATGGGAAGGAGAATGTGCTGGCATCGCTGGGATGAT----TTTCTCACACTACATGAATAGTATCTACAGACTTCGTGAATATGAGCCACTTGCATGGAGTTAAAGTAGGCATCCCTTTGCTGGGAAATTTATCAAATGGGAGTATGAAGTGTTTTTAAAAGATAC-TTGTTTGTT---------------------------TGTAGCTTTTAGGCCT-------AC-----AGTGGCTCATGGCAATGGTTGA-----------------------GGTTGCTAAGATTTGGTGGAAGAAGGCAAAATGAAATGGCCAATTATATGGTATATGGTACATGGATCACTTGTTTC-TGTTGA---G---TTACTGACTCAGCTGGCTATTTCTCCCAATGTTAGTTATTTGGAGA-----AAAAAGAAACGTGATG------GTAA--TTT--TGGGGTAACAAATACAATATTTGATGAAAGCAAAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55748287 489 + 99891981 AATGCTCAATCTAAGTTTCAATGCCCTCCATAAAATTGTTGTACTG------TGAAATACAA---ATCTCTC-----ACCCATGGCCTGA--ATATGTTTGCAAACTAAGCAGAT-CATGGGAAGGAGAATGTGCTAGCATCACTGGGATGGT----TTTCTCATACTGCATTAATAATATCTCTAGACTTCGTGAATATGAGCCACCTGCATAGAGTGAAAGTAGGCATCTCTTTGCTGGGAAATTTATCAAATGGGAGTGTGAAGTGTTTTTAAAAGATAC-ATGTTTGTT---------------------------TGTAGCCGGTAGGCCT-------AC-----AGTGGCTCTTGGCAATGGTTGA-----------------------AGTTGCTAAGATTTGGAGGAAGGAGGCAAAATGAAATGGCCACT-------TATATGGTATATGGATCACTTGTTTC-TGTTGA---G---TTACAGATTCAGCTGGCTATTTCTCCCAATGTTAGTTATTTGGAG--------AAAAAAATTTGATG------GTAG--TTT--TGGGGTAACAAATACAATATTTGATGAAAGCAAAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133445154 492 - 185818997 AATGCTCAATCTAAGTTTCAATGCCCTCCATAAAATTGTTGTACTG------TGAAATACAA---ATTTCTC-----ACACATGGCCTGA--ATATGTTTGCAAACTAAGTAGAT-CATGGGAAGAAGAATGTGCTCGTATCACTGGGATGAT----TTTCTCACACTGCATTAATAATATCGCCAGACTTCCC-AATATGAGCCACTTGGATAGAGTTAAAATAGGCATCTATTTGCTGAGAAATTTATCAAATGGGAGTATGAAGTGTTTTCAAAAGATAC-TTGTTTGTT---------------------------TGTAGCTGGTAAGCCT-------AC-----AGTGGCTCATGGCAATGGTTGA-----------------------GGTTGTTAAGATTTGGTGGAAGGAGGTGAAATGAAATGGCCACT-------TAAACGATATATGGATCACTTGTTTC-TGTTGA---G---TTACAGATTCAGCTGGCTATTTCTCCCAATGTTAGTTATTTGGAGG----AAAAAAAAATCATGATG------GTAA--TTT--TGGGGTAATAAATACAATATTTGATGAAAGCAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67274788 491 + 192294377 AATGCTCAATCTAAGTTTCAATGCCCTCCATAAAATTGTTGTACTG------TGAAATACAA---ATTTCTC-----ACACATGGCCTGA--ATATGTTTGCAAACTAAGTAGAT-CATGGGAAGAAGAATGTGCTCGTATCACTGGGATGAT----TTTCTCACACTGCATTAATAATATCGCCAGACTTCCC-AATATGAGCCACTTGGATAGAGTTAAAATAGGCATCTATTTGCTGAGAAATTTATCAAATGGGAGTATGAAGTGTTTTCAAAAGATAC-TTGTTTGTT---------------------------TGTAGCTGGTAAGCCT-------AC-----AGTGGCTCATGGCAATGGTTGA-----------------------GGTTGTTAAGATTTGGTGGAAGGAGGTGAAATGAAATGGCCACT-------TAAACGATATATGGATCACTTGTTTC-TGTTGA---G---TTACAGATTCAGCTGGCTATTTCTCCCAATGTTAGTTATTTGGAGG-----AAAAAACATCATGATG------GTAA--TTT--TGGGGTAATAAATACAATATTTGATGAAAGCAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2756831 491 + 3123512 AATGCTCAATCTAAGTTTCAATGCCCTCCATAAAATTGTTGTACTG------TGAAATACAA---ATTTCTC-----ACACATGGCCTGA--ATATGTTTGCAAACTAAGTAGAT-CATGGGAAGAAGAATGTGCTCGTATCACTGGGATGAT----TTTCTCACACTGCATTAATAATATCGCCAGACTTCCC-AATATGAGCCACTTGGATAGAGTTAAAATAGGCATCTATTTGCTGAGAAATTTATCAAATGGGAGTATGAAGTGTTTTCAAAAGATAC-TTGTTTGTT---------------------------TGTAGCTGGTAAGCCT-------AC-----AGTGGCTCATGGCAATGGTTGA-----------------------GGTTGTTAAGATTTGGTGGAAGGAGGTGAAATGAAATGGCCACT-------TAAACGATATATGGATCACTTGTTTC-TGTTGA---G---TTACAGATTCAGCTGGCTATTTCTCCCAATGTTAGTTATTTGGAGG-----AAAAAAAATCATGATG------GTAA--TTT--TGGGGTAATAAATACAATATTTGATGAAAGCAAAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2477098 489 + 10077455 AATGCTCAATCTAAGTTTCAATGCCCTCCATAAAATTGTTGTACTG------TGAAATACAA---ATTTCTC-----ACACATGGCCTGA--ATATGTTTGCAAACTAAGTAGAT-CATGGGAAGGAGAACGTGCTCACATCACCGGGATGAT----TTTCTCACACTGCATTAATAATATCGTCAGACTTCCCAAATATGAGCCACTTGGATAGAGTTAAAATAGGCATCTATTTGCTGAGAAATTTATCAAATGGGAGTATGAAGTGTTTTT--AAGATAC-TTGTTTGTT---------------------------TGTAGCTGGTAAGCCT-------AC-----AGTGGCTCATGGCAATGGTTGA-----------------------GGTTGTTAAGATTTGGTGGAAGGAGGTGAAATGAAATGGCCACT-------TAAACGATATATGGATCACTTGTTTC-TGTTGA---G---TTACAGATTCAGCTGGCTATTTCTCCCAATGTTAGTTATTTGGAG------AAAAAAAAACATGATG------GTAA--TTT--TGGGGTAATAAATACAATATTTGATGAAACCAAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5685115 490 + 127223203 AATGCTCAATCTAAGTTTCAGTGCCCTCCATAAAATTATTGTACTG------TGAAATACAA---ATTTCTC-----ACACATGGCCTGA--ATATGTTTGCAAACTAAGTAGAT-CATGGGAAGGAGAATGTGCTGGCATCACCGGGATGAT----TTTCTCACACTGCATTAATAATATCGCCAGACTTCCCAAATATGAGCCACTTGGATAGAGTTAAAATAGGCATCTATTTGCTGAGAAATTTATCAAATGGGAATATGAAGTGTTTTAAAAAGATAC-TTGTTTGTT---------------------------TGTAGCTGGTAGGCCT-------AC-----AGTGGCTCATGGCAATGGTTGA-----------------------GGTTGTTAAGA-TTGGTGGAAGGAGGTGAAATGAAATGGCCACT-------TAAACAATATATGGATCACTTGTTTC-TGTTGA---G---TTACAGATTCAGCTGGCTATTTCTACCAATGTTAGTTATTTGGAG------AAAAAAAATCATGATG------GTAA--TTT--TGGGGTAATAAATACAATATTTGATGAAAGCAAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1129282 490 - 1799296 AATGCTCAATCTAAGTTTCAATGCCCTCCATAAAATTGTTGTACTG------TGAAATACAA---ATTTCTC-----ACACATGGCCTGA--ATATGTTTGCAAACTAAGTAGAT-CATGGGAAGGAGAATGTGCTCGCATCACCGGGATGAT----TTTCTCACATTGCATTAATAATATCGCCAGACTTCCCAAATATGAGCCACTTGGATAGAGTTAAAATAGGCATCTATTTGCTGAGAAATTTATCAAATGGGAGTATGAAGTGTTTTCAAAAGATAC-TTGTTTGTT---------------------------TGTAGCTGGTAAGCCT-------AC-----AGTGGCTCATCGCAATGGTTGA-----------------------GGTTGTTAAGATTTGGTGGAAGGAGGTGAAATGAAATGGCCACT-------TAAACGATATATGGATTACTTGTTTC-TGTTGA---G---TTACAGATTCAGCTGGCTATTTCTCCCAATGTTAGTTATTTGGAG------AAAAAAAA-AATGATG------GTAA--TTT--TGGGGTAATAAATACAATATTTGATGAAAGCAAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1728011 496 + 6934359 AGTGCTCAATCTAAGTTTCAATGCCCTCCATAAAATTGTTGTACTG------TGAAATACAA---ATTTCTC-----ACACATGGACTGA--ATATGTTTGCAAACTAAGTAGAT-CATGGGAAGGAGAATGTGCTGGCATCACGGGGATGAT----TTTCTCACCCTGCGTTAATAATATCGCCAGACTTCCCAAATATGAGCCACTTGGATAGAGTTAAAACAGGCATCTATTTGCTGAGAAATTTATCAAATGGGAGTATAAAGTGTTTTCAAAAGATAC-TTGTTTGTT---------------------------TGTAGCTGGTAGGCCT-------AC-----AGTGACTCATGGCAATGCTTGA-----------------------GGTTGTTAAGA-CTGGTGGAAGGAGATGAAATGAAATGGCCACT-------TAAACGATATATGGATCACTTGTTTC-TGTTGA---G---TTACAGATTCAGCTGGCTATTTCTCCCAATGTTAGTTATTTGGAGAAAAAAAAAAAAAAACATGATG------GTAA--TTT--TGGAGTAATAAATACAATATTTGATGAAAGCAAAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108088097 488 - 128169293 AATGCTGAATCTAAGTTTCAATGCCCTCCA-AAAATTGTTGTATTG------TGAAATACTA---ATCTCTC-----ACCCATGACCTGA--ATATGTTTGCAAACTAAGCAGGT-CATGGGAAGGAGAACGTGCTGGCATCACTGGGATGAT----TTTCTGATGCCACATTAGTAATATCTCCAGACTTCGCAAATATGAGCCACTTGCATAGAATTAAAACAGGCATTTGTCTGCTGGGGAATTTATCAATTGGGAGTATGAAGTGTTTATAAAAGGTAC-TTGTTTGCT---------------------------TGTAGACAATAGGCCT-------AC-----AGTGGCTCATGGCAATTGCTGA-----------------------GGTTGCTAAGATTTGGTGGAAGGAGGCAAAATGAAATTTCCAGT-------GAAAGGGTATATGGATCACTTGTTTC-TGTTCA---A---TTCCAGATTGAGCTGACTATTTCTCCCAATGTTAGTTATTTGGAG-------AAAAAAAGCATGATG------GTAA---TT--TGGGATAATAAATACAATATTTGAGGAGAGCAAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 708806 486 - 18371965 AATGCTGAATCTAAGTTTCAATGTCCTCTA-AAAATTGTT-TATTG------TGAAATACTA---ATCTCTC-----ACCCACAACCTGA--ATATGTTTGCAAACTAAGCAGGT-CATGGGAAGGAGAACCTGCTGGCATCACTGGGATGGT----CTTCTCACACTGCATTAATAATGTCTCCAGGCTCTGCAAATATGAGCCTCTTGCGTAGAGTTAAAACAGGTATTTGTCTGCTAGGGAATGTATCAAATGGGAGTATGAAGTGTTT-TAAAAGATAC-TTTTTTGTT---------------------------TGTAGACAACAGGCCT--------C-----AGTGGCTCATGACAATGGTTAG-----------------------GGTTGCTAACATTTGGTGGAAGGAGGCAAAATGAAATTGCCACT-------GAAAGGGCACATGGATCACTTGTTTC-TGTTCA---A---TTCCAGACTGAGCAGGCTATTTCTCCCAATGTTAGTTATTTGAAG-------AAAAAAAACATGATG------GTAA--TTT--TGGGCTAATAAATTCAATACTTGAGGAAAGCAAAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1369182 494 + 3566421 AATGCTGAATCTAAGTTTCAATGACCTCCA-AAAATTGTTGTATTG------TGAAATACTA---ATCTCTC-----ACCCATGACCAGA--ATATGTTTGCAAACTAAGCAGGT-CATGGGAAGGAGAATGTGCTGGCATCACTGGGATGAT----TGTCTCACATTGCATTAATAATATATCCAGACTTCGCAAATATGAGCCACTTGCATAGAGTTAAAACAGGCATTTGTCTGCTGGGGAATTTATCAAATGGGAGTATGAAGTGTTTTTAAAAGATAC-TTGTTTGTT---------------------------TGCAGACAATAGGCCT-------AC-----AGTGGCTCATGGCAATAGTTGG-----------------------GGTTGCTGAGATTTGGTGGAAGGAGGCAGAATGAAATAGCCACT-------GAGAGGGCATATGGATCACCTGTTTC-TGTTCA---A---TTCCAGATTGAGCTGGCTACTTCTCCCAATGTTAGTTATTTGGAGGAAA--AAAAAAAAACATGATG------GTAA--TTT--GGGGGTAATAAATACAATATTTGAGGAAAGCAAAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1871773 488 - 9267652 AATGCTGAATCTAAGTTTCAATGCCCTCCA-AAAACTGTTGTATTG------TGAAATACTAATCATCTCTC-----ACCCATGACCTGA--ATATGTTTGCAAACTAAGCAAGT-CATGGGAAGGAGAACGTGCTGGCATCACTGGGATGAT----TTTCTCACACTGCATTAATAATATCTCCAGACTTCACAAATATGAGCCACTTGCATAGAGTTAAAACAGGCATTTGTCTGCTGGGGAATTTATCAAATTGGAGTATGAAGTGTTTTTAAAAGA-----CGTTTATT---------------------------TGTAGGCAATAGGCCT-------AC-----AGTGGCTCATGGCAATGGTTGA-----------------------GGTTGCTAAGATTTGGTGGAAGGAGGCAAAATGAAATTGCCACT-------GAAAGGGCATATGGAACACTTGTTTC-TGTTCA---A---TTCCAGATTGAGCTGGCTATTTCTCCCAATGTTAGTTATTTGAAG-------AAAAAAAACATGATG------GTAA--TTT--TGGGGTAATAAATACAATATTTGAGGAAAGCAAAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12701942 490 + 14340318 AATGCTCAATCTAAGTATCACAGCCCTCCATAGAATGTCTATGTCA------TGAAATAAAA---ATCTCTC-----ACCCCTGGCCTGA--ATATGTTTGCAAGCCCTGTGGATCCACAGGCCAAAGAATATGTGGGCTTCTCCGGGAAGAT----TTTCTCACACTTCACTAATAATACCTCTAATTATCCCAAATATGGGTAACTTACACAGAATTAAAATAGGCATCTGCTTGCTGGGAAATTTATCAAATGGAAGTATGGAATGTTTTTAAAATACAT-TTATTTTTT--------ATCAGAAGCCTTATGGTCATCTGGATTGCAAGCTTGATAAG-AG-----GTCTGCTCATGGCAGTGGCTGA-----------------------GGCTTCTCCAATTTGGTGGAGACAGGCAAGACA----GCCCACT-------T-------------GTCTCCTGTTCA-TATTG---------TATGGATTCAGTTGGCTAATTCTTCCAAT-TTGGTTCCTAGAGG----------AAAAACATGAAA------ACAACTTTT--TGGAGTAAAAA----AAGACTTGATGAAACCACAG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51741787 527 - 55844845 ACTACTCAATCTAAGTACCAAAGCCTGCCATAAAACTGTTTTTTTGGGTGTATGAAATAAAA---ATCCCTC-----TCATATGGCTTGA--ACATGTTTGCAAACCTAGATAAT-CATGAGAAGGAGAATATATTGACTTCTCTAGGATAGT----TTTATTACATCACACTAGTAAAACCTGTGAGTTTCTCAAATATGGGCCATTCG-ATGGAGTTAAGATGTGGATCTGTTTGATGGGGAATGTATCAAACAGAAGCATGAAGTGTTGCAAAAATATAT-ATCTTTATTTTCTTTTAGTCAATAATCAGTTGGCCATCCAGATAGCAAGTTTGATAAGAGC-----TCTGTCTGATGGCAGGAATTGT-----------------------GGTTACTAAGGTTTGGTAGAGGCAAAATAAGGGAAATGGCCACT-------GAGGTGGTATACAAGCCACCTGTTTTACATTCACAGT---TCGCAGAGTCTTCTGGCTAATTTTCCCAGCTTTGGTTCCCAGGGA---------AAAAGACATGATG------CTAT--TTT--GACAGTAAATCTTAAAAGATTTACTGAAACC---- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1142412 512 + 1446996 AATACTAAATCTAGGTATGAAAGTCC----------------AATA------TGAAATAAAA---ATCCCTCTCTAATCACATAGCCTGAATATATATTTGCAAATATAATGGGC-CAAGGGATGGATAATACGCTGTTTTCTGTAGGATGATTTCATTTCTCACCTTATGTGAATAAAACCTGTGAATTTCTCAAATACGAACTG-TTCCATGGAATTAAAATGAGGATCTGTTTACTGGGGAATGCATCAA-CAAAAGTA-----TGTTTTTGTTGTGTCTGCTGTTTATT---------------------------TTTATTCAGTAAGGAT-------GCATATGAAAGGCTGGTGGCAGTGATTGAAGTTGTGAAATGTTACACTACGTGGTTACTCAGATTTGGTGGTGAGAG---AAATGAAACGGTATCT-------GAGAGTTCAAACAAGGCACTTTTTCC-TGTTCA---AGCTTTACAGATTCAGTTGGCTAATTCTCCCATTTCGATTCCTTTGGAT------AGAAAATAAAATGACATAGCACAGAG--TTTGCTGAGATTGTAA----AATATATAACGAAAACAAGT i dasNov3.JH578441 I 273 I 14881 e rhiRox1.KN300005v1 671671 912 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e panPan2.chr7 108498887 0 - 162613886 C a score=1211924.000000 s hg38.chrUn_KI270749v1 44545 152 + 158759 TTATTGAGGGTTAGACAAACTACAAGATA--------------CTTTAAGCTGCA-AAGTCAACACGAGACTTCTGGCCCAAATTGTGCAGAGTTTGCGTccagctgcaaag--------------------------------ttcaa------------------aggaagaggccata---------------------------------------taagacgattctcacttctgacaccaactgccagtt s panTro5.chr1 101870805 152 - 228573443 TTATTGAGGGTTAGACAAACTACAAGATA--------------ATTTAGGCTGCA-AAGTCAACACGAGACTTCTGGCCCAAATTCTGCAGAGTTTGCGTccagctgcaaag--------------------------------ttcaa------------------aggaagaggccata---------------------------------------taagatgattcgcacttttgtcaccaactgccagtt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 24296 152 - 126596 TTATTGAGGGTTAGACAAACTACAAGATA--------------CTTTACGCTGCA-AAGTCAACACGAGACTTCTGGCCCAAATTGTGCAGAGTTTGCGTccagctgcacag--------------------------------ttcaa------------------aggaagaggccata---------------------------------------taagacgattctcacttctgacaccaactaccagat i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55748776 152 + 99891981 TTATTGAGGGTTAGACAAACTACAAGATA--------------CTTCAGGCTGCA-AAGTCAACACGAGAATTCTGGCCCAAATTGTGCAGAGTTTGGGTccagctgcaaag--------------------------------ttcaa------------------aggaagaggccata---------------------------------------taagactattctcacctctgacaccaacttccagtt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133445646 152 - 185818997 TTATTGAGGGTTAGACAAACTACAAGATA--------------CTTTAGGCTGCA-AAGTCTGCATGAGAATTCTGGCCCAAATTGTTCAGACTTTGGGTccaacagcaaag--------------------------------ttcaa------------------aggaagaggccata---------------------------------------taagactgcactcacttctgacaccaactgccaatt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67275279 152 + 192294377 TTATTGAGGGTTAGACAAACTACAAGATA--------------CTTTAGGCTGCA-AAGTCTGCATGAGAATTCTGGCCCAAATTGTTCAGACTTTGGGTccaacagcaaag--------------------------------ttcaa------------------aggaagaggccata---------------------------------------taagactgcactcacttctgacaccaactgccaatt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2757322 152 + 3123512 TTATTGAGGGTTAGACAAACTACAAGATA--------------CTTTAGGCTGCA-AAGTCTGCATGAGAATTCTGGCCCAAATTGTTCAGACTTTGGGTccaacagcaaag--------------------------------ttcaa------------------aggaagaggccata---------------------------------------taagactacactcacttctgacaccaactgccaatt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2477587 152 + 10077455 TTATTGAGGGTTAGACAAACTACAAGATA--------------CTTTAGGCTGCA-AAGTCTGCATGAGAATTCTGGCCCAAATTGTTCAGACTTTGGTTccaacagcaaag--------------------------------ttcaa------------------aggaagaggccata---------------------------------------taagactacactcacttctgacaccaactgccagtt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5685605 152 + 127223203 TTATTGAGGGTTAGACAAACTACAAGACA--------------CTTTAGGCTGCA-AAGTCTGCATGAGAATTCTGGCCCAAATTGTTCAGACTTTGGGTccaacagcaaag--------------------------------ttcaa------------------aggaagaggccata---------------------------------------taagactacactcacttctgacacctactgccagtt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1129772 152 - 1799296 TTATTGAGGGTTAGACAAACTACAAGATA--------------CTTTAGGCTGCA-AAGTCTACACGAGAATTCTGGCCCAAATTGTTCAGACTTTGGGTccaacagcaaag--------------------------------ttcaa------------------aggaagaggccata---------------------------------------taagactacactcacttctgacaccaactgccagtt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1728507 151 + 6934359 TTATTGAGGGTTAGACAAACTACAAGATA--------------CTTTAGGCTGCA-AAGTCTGCACAAGAATTCTGGCCCAAATTGTTCAGACTTTGGGTccaacagcaaag--------------------------------ttcaa------------------aggaagaggccata---------------------------------------taagactacagtcacttctgaca-caactgccagtt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108088585 148 - 128169293 TTATTGAGGGTTAGACAAACTGCAAGATG--------------CTTTGGCCTGCA-AAGTCTGCATGACACTTCTGGCCCAGATTGCACAGAGTTTGGGTccagctgcaaag--------------------------------ttcaa------------------ag----aggccgta---------------------------------------taagactattctcacttctgacaccaactgccagtt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 709292 141 - 18371965 TTACTGAGGATTAGACAAACCGCAAGA-------------------TAGCCTGCA-AAGTCTGCATGAGACTTCTGGCCCAAATtg--tgaagtttgggtccagctgcaaag--------------------------------ttcaa------------------ag-----ggccata--------------------------------------ttaagactactctcacttctgacaccaactgcccatt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1369676 145 + 3566421 TTATTGAGGGTTAGACAAACTGCAAGATG--------------CTTTAGCCTGCA-AAGTCTGCATGAGCCTTCTGGCCCAAACTG--TGCAGTTTGGGTccagctgccaag--------------------------------ttcaa------------------ag-----ggccata---------------------------------------taagactactctcacttctgacaccaactgccagtt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1872261 146 - 9267652 TTATTGAGGGTTAGACAAACTGCAAGATG--------------CTTTAGCCTGCA-AAGTCTGCATGAGACTTCTGGCCCAAATTG--TGCAGTTTGGGTccagctgcgaag--------------------------------ttcaa------------------ag----aggccata---------------------------------------taagactactctcacttctgacaccaactgccagtt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12702432 239 + 14340318 TTACTTAGCATTAGCCAGAGTACACAATT--------------ATTCAGACTG---AAGTCTGCTAAAAACTACTGATTGAAACTGTGCAGAGTTTGAGTGCCAGTACAAAGCATGAGACAAGAGTGCTTCTAATAcagtggttctcaacctatgggtcgtgacattaggaaggtgacattaaagggtcttggcattaggaaggctgagaactactgttctaATATAATTctcaagtctgccaccaacttcaagtt i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51742314 156 - 55844845 ------AGAGTTAAACAAATTGTGAGGTTGAGTACAGACAGACCTCCAAACTGGACAAGTCTGTCCCAAACTT-TGACTCAAAATTCAAGGCAGTAGAATCTGTCTACAAAA--------------------------------TGAGA------------------GACAAGAGTCCTCA---------------------------------------TGAGACCAATCCCAGTTC--ACATCCAC--CCAGTT i canFam3.chr18 C 0 I 1236 e rhiRox1.KN300005v1 671671 912 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e dasNov3.JH578441 1142924 14881 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=1071242.000000 s hg38.chrUn_KI270749v1 44697 131 + 158759 caggggtttcccctgaacaccctcagtttcaagaatttactagaaagactcacagaactcattgaatgccattgtacttacggtttataatagagaaagggtagaaattaggaccaatt----ggagagacat-----at s panTro5.chr1 101870957 140 - 228573443 caggggtttccccagaacactctcagtttcaagaatttactaaaaagactcacagaactcattgaatgccattgtactcatggtttataatagagaaagggtagaaattaggaccaatcaaaggaagagacatatcacat i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 24448 136 - 126596 caggggtttcccctgaacaccctcagtttcaagaatttactagaaagactcacagaactcattgaatgccattgtactcatggtttataatagagaaagggtagaaattaggaccaatt----gaagagacatatcatgt i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55748928 140 + 99891981 caggggtttccccagaacaccctcagtttcaagaatttactagaaagactcacaggactcattgaatgctattgtactcatggtttataatagagaaagggtagaaattaggatcaatcaaaggaagagacatatcatat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133445798 131 - 185818997 caggggtttccccagagtgccctcagtttcaagaatttact----agactcacagaactcattgaatgctattgtattcatggtttaaaatagagaaaggatagaaattaggaccaatcaaaggaagagacatat----- i rheMac8.chr3 C 0 I 1 s macFas5.chr3 67275431 131 + 192294377 caggggtttccccagagtgccctcagtttcaagaatttact----agactcacagaactcattgaatgctattgtattcatggtttaaaatagagaaaggatagaaattaggaccaatcgaaggaagagacatat----- i macFas5.chr3 C 0 I 1 s macNem1.NW_012011522v1 2757474 131 + 3123512 caggggtttccccagagtgccctcagtttcaagaatttact----agactcacagaactcattgaatgctattgtattcatggtttaaaatagagaaaggatagaaattaggaccaatcgaaggaagagacatat----- i macNem1.NW_012011522v1 C 0 I 1 s cerAty1.NW_012000909v1 2477739 131 + 10077455 caggggtttccccagagcgccctcagtttcaagaatttact----agactcacagaactcattgaatgctattgtattcatggtttaaaatagagaaaggatagaaattaggacgaatcgaaggaagagacatat----- i cerAty1.NW_012000909v1 C 0 I 1 s chlSab2.chr21 5685757 131 + 127223203 caggggtttccccagagcaccttcagtttcaagaatttact----agactcacagaactcattgaatgctattgtattcatggtttaaaatagagaaaggatagaaattaggaccaatcaaaggaagaggcatat----- i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012105809v1 1129924 131 - 1799296 caggggtttccccagagcgccctcagtttcaagaatttact----agactcacagaactcattgaatgctattgtattcatggtttaaaatagagaaaggatagaaattaggaccaattgaaggaagagacatat----- i manLeu1.NW_012105809v1 C 0 I 1 s colAng1.NW_012115910v1 1728658 131 + 6934359 caggggtttccccagaacaccctcagttttaagaatttact----agactcacagaactcattgaatgctattgtactcatggtttaaaacagagaaagggtagaaattaggaccaatcaaaggaagagacatat----- i colAng1.NW_012115910v1 C 0 I 1 s calJac3.chr8 108088733 140 - 128169293 tgggggtttccccagaacacactcagtttcaagaatttactagaaagatttacagaactcagtgaacactattgtacttatgatttataatagagaaaggatagaaattcagagcaatcaaaggaagaggcatatcatat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 709433 140 - 18371965 caggggtttccccacaacacactcagtttcaagaatttactagaaagatttacagaactcactgaacactatggtactcatggtttataatagagaaaggatagaaattaggagcaatcaaaggaagagacatatcatat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1369821 140 + 3566421 caagggtttccccagaacacactcagttttaagaatttactagaaagatttacacaactcactgaacactattgtactcatggtttataatagagaaaggatagaaattaggagcaatcaaaggaagagacatatcatat i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1872407 140 - 9267652 caggggtttctgcagaacagactcagtttcaagaatttactagaaagacttacagaactcactgaacactattgtactcatggtttataatagagaaaggatagaaattaggagcaatcaaagtaagaaacatatcacat i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12702671 102 + 14340318 cagcagtatctccaaaccaccaccaat------aattcactagaaagttgcatagaactcactgaatgctaatattctcac------------------------aaatgctgtttattacaggACGAGAAG-------- i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 671671 912 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=13492.000000 s hg38.chrUn_KI270749v1 44828 2 + 158759 aa s panTro5.chr1 101871097 2 - 228573443 aa i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 24584 2 - 126596 aa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55749068 2 + 99891981 aa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133445930 1 - 185818997 -a i rheMac8.chr3 I 1 I 7 s macFas5.chr3 67275563 1 + 192294377 -a i macFas5.chr3 I 1 I 7 s macNem1.NW_012011522v1 2757606 1 + 3123512 -a i macNem1.NW_012011522v1 I 1 I 7 s cerAty1.NW_012000909v1 2477871 1 + 10077455 -a i cerAty1.NW_012000909v1 I 1 I 7 s chlSab2.chr21 5685889 1 + 127223203 -a i chlSab2.chr21 I 1 I 7 s manLeu1.NW_012105809v1 1130056 1 - 1799296 -a i manLeu1.NW_012105809v1 I 1 I 7 s colAng1.NW_012115910v1 1728790 1 + 6934359 -a i colAng1.NW_012115910v1 I 1 I 7 s rhiRox1.KN300005v1 672583 1 - 4311341 -a i rhiRox1.KN300005v1 I 912 I 28899 s calJac3.chr8 108088873 2 - 128169293 aa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 709573 2 - 18371965 aa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1369961 2 + 3566421 aa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1872547 2 - 9267652 aa i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12702773 2 + 14340318 AA i otoGar3.GL873564 C 0 C 0 e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=1035164.000000 s hg38.chrUn_KI270749v1 44830 115 + 158759 ggtggaatctagga-gattttgaatgttaagtttccattgtcttcaggacatacta----tctgtcattgttgtacagcaataaacatggagtactac-------caacctggggagctcacctgaT s panTro5.chr1 101871099 116 - 228573443 ggtggtatctaggaggattttgaatgttaagtttccattgtcttcaggacatatta----cctgtcattgttgtacagcaataaacatggagtactac-------caacctggggagctcacctgaT i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 24586 115 - 126596 gttggaatctagga-gattttgaatgttaagtttccattgtcttcaggacatatta----cctgtcattgttgtacagcaataaacatggagtgctac-------caacctggggagctcacctgaT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55749070 116 + 99891981 agtggaatctaggaggattttgaatgttaagtttccattgtcttcaggacatatta----cctgttattgttgtacagcaataaacatggagtactac-------caacatggggagctcacctgaT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133445938 116 - 185818997 ggtggaatctaagaggattttgaatgttaagtttccattgtcttcaggacatatta----cctgtcattgttgtacagcaataaacatggagtattac-------caacctggggagccctcctgaT i rheMac8.chr3 I 7 C 0 s macFas5.chr3 67275571 116 + 192294377 ggtggaatctaagaggattttgaatgttaagtttccattgtcttcaggacatatta----cctgtcattgttgtacagcaataaacatggagtattac-------caacctggggagccctcctgaT i macFas5.chr3 I 7 C 0 s macNem1.NW_012011522v1 2757614 116 + 3123512 ggtggaatctaagaggattttgaatgttaagtttccattgtcttcaggacatatta----cctgtcattgttgtacagcaataaacatggagtattac-------caacctggggaaccctcctgaT i macNem1.NW_012011522v1 I 7 C 0 s cerAty1.NW_012000909v1 2477879 116 + 10077455 ggtggaatctaagaggattttgaatgttaagtttccattgtcttcaggacatatta----cctgtcattgttgtacagcaataaacatagagtactac-------caacctggggagcccacctgaT i cerAty1.NW_012000909v1 I 7 C 0 s chlSab2.chr21 5685897 123 + 127223203 ggtggaatctaggaggattttgaatgttaagtttccattgtcttcaggacatatta----cctgtcattgttgtacagcaataaacatggagtactaccaaccTGCAACCTGGGGAGCCCTCCTGAT i chlSab2.chr21 I 7 C 0 s manLeu1.NW_012105809v1 1130064 116 - 1799296 ggtggaatctaagaggattttgaatgttaagtttccattgtcttcaggacatatta----cctgtcattgttgtacagcaataaacatggagtactac-------caacctggggagccctcctgaT i manLeu1.NW_012105809v1 I 7 C 0 s colAng1.NW_012115910v1 1728798 116 + 6934359 ggtagaatctagaaggattttgaatgttaagtttccattgtcTCCAGGACATATTA----CCTGTCATTGTTGTACAGCAACAAACATGGACTACTAT-------CAACCTGGGGAGCCCTCCTGAT i colAng1.NW_012115910v1 I 7 C 0 s calJac3.chr8 108088875 116 - 128169293 ggtggaatctaggaggattttgaatgttaagtttccattgtcttcaagaaatacta----cctgtcattgttgtatggcaataaccatggagtactac-------caaccacaggaggtcatctgaT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 709575 98 - 18371965 ggtggaatctaggaggattctgaatgttaagtttccattgtcttcAGGAAATACTA----CCTGTCTTTGTTGTATGGCAATAACCAT-------------------------GGAGGTCATCTGAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1369963 116 + 3566421 ggtggaatccaggaggattttgaatgttaagtttccactgccttcaggaaatacta----cctgtccttgttgtatggcaatcaccatggagtgctat-------caaccgcaggaggtcatctgaT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1872549 116 - 9267652 ggtggaatctaggaggattttgaatgttaagtttccattgtcttcaggacatacta----cctgtcattgttgtatggcagcaaccatggagtactac-------caacctcaggaggtcatctgaT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12702775 120 + 14340318 GGTGAGACCTAAGAGGATTTTAAATGCTGAGGTTCCATTGTCTTCAGGACACATGAACttcctgtcagtgctgtgtggcaataagtgtgaggcactgc-------caacctggggagctcagctgat i otoGar3.GL873564 C 0 I 6173 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=1084928.000000 s hg38.chrUn_KI270749v1 44945 152 + 158759 GCTAAAAAGACACTATTTAGAGAATGAAAAGACAAATGAAAGGATGGGataagatgaccttccacattaaagcactggaaagaataaaaaactaaacctaaagcaagcagaaggaagaaaataaaaattagagaaattaataaTTTATA---------ATA s panTro5.chr1 101871215 161 - 228573443 GCTAAAAAGACACTATTTAGAAAATGAAAAGACAAAGGAAAGGAGGAGataagatgaccttccactttaaggcactggaaagaatagcaaactaaacctaaagcaagcagaaggaagaaaattaaaattagagAAATTAAGAATTTATAATGTTAATCATA i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 24701 158 - 126596 GCTAAAAAGACACTATTTCGAAAATGAAAAGACAAATGAAAGGATGAGataagatgaccttccacattaaggctctggaaagaatagcaaactaaacctaaagcaagcagaaggaagaaaataaaaaatagagtaATTAATAATTTATAATAATA---ATA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55749186 161 + 99891981 GCTATGAAGACACTATttagaaaatgaaaagaaaaatgaaaggatgagataagatgaccttccacattaaggcactggaaaaaatagcaaactaaacctaaagcaagcagaaggaagaaaataaaaattagagaaattaataaTTTATAATATTAATAATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133446054 150 - 185818997 G-----AAGACACTATTTAGAAAATGAAAAGACAAATgaaaggctgagataatatgaccttccacattaaggtactggaaaaactagcaa---aaacctaaagcaagcagaaggaagacaatgaaaattagagaaattaataaTTTATAATAATA---ATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67275687 150 + 192294377 G-----AAGACACTATTTAGAAAATGAAAAGACAAATgaaaggctgagataatatgaccttccacattaaggtactggaaaaactagcaa---aaacctaaagcaagcagaaggaagacaatgaaaattagagaaattaataaTTTATAATAATA---ATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2757730 150 + 3123512 G-----AAGACACTATTTAGAAAATGAAAAGACAAATgaaaggctgagataatatgaccttccacattaaggtactggaaaaactagcaa---aaacctaaagcaagcagaaggaagacaatgaaaattagagaaattaataaTTTATAATAATA---ATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2477995 150 + 10077455 G-----AAGACACTATTTAGAAAATGAAAAGACAAATgaaaggctgagataagatgaccttccacattaaggtgctggaaaaactagcaa---aaacctaaagcaagcagaaggaagacaatgaaaattagagaaattaataaTTTATAATAATA---ATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5686020 147 + 127223203 G-----AAGACACTATTTAGAAAATGAAAAGACAAATGAAAGGCTGAGataagatgaccttccacattaaggtactggaaaaactagcaa---aaacctaaagcaagcagaaggaagacaatgaaaattagagACATTAATAATTT---ATAATA---ATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1130180 150 - 1799296 G-----AAGACACTATTTAGAAAATGAAAAGACAAATGAAAGACTGAGataagatgaccttccacattaaggtactggaaaaactagcaa---aaacctaaagcaagcagaaggaagacaatgaaaattagagaaattaataaTTTATAATAATA---ATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1728914 147 + 6934359 G-----AAGACACTATTTAGAAAATGAAAAGACAAATGAAAGACTGAaataaggtgactttccacattaaggtactggaaaaactagcaa---aaacctaaagcaagcagaaggaagacaatgaaaattagagaaattaataaTTT---ATAATA---ATA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108088991 149 - 128169293 ACTATTAAGACA-TATTAAGAAAATGAAAATG-AAACGAAACACTGAGATAAGATGAActtctgcattaagacattggaaaaaatagcaaactaaacctaaagcaaggagaaggaagaaaat-aaaattagagaaattaataaTTTATAATA--------- i calJac3.chr8 C 0 I 9 s saiBol1.JH378145 709673 151 - 18371965 ACTATGAAGACA-TATTAAGAAAATGAAAATACGAATGAAACACTGAGataagatgaccttctgcattaagacactggaaaaaatagcaaaataaacctaaagcaatcagaaggaagaaaataaaaattagagaaattaataaTTTATAATA--------- i saiBol1.JH378145 C 0 I 4 s cebCap1.NW_016107540v1 1370079 151 + 3566421 ACTATTAAGACA-TATTAAGAAAATGAAAATACAAACGAAACACTGAGataagatgaccttctgcattaagacactggaaaaaatagcaaagtaaacctaaagcaagcagaaggaagaaaataaaaattagagaaattaataaTTTATAATA--------- i cebCap1.NW_016107540v1 C 0 I 6 s aotNan1.NW_018514471v1 1872665 151 - 9267652 ACTATTAAGACa-tattaagaaaatgaaaatacaactgaaacactgagataagatgaccttctgcattaagacactggaaaaaatagcaaactaaacctaaagcaaacagaaggaaggaaataaaaattagagaaattaataaTTTATAATA--------- i aotNan1.NW_018514471v1 C 0 I 61 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12702895 6173 + 14340318 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=291551.000000 s hg38.chrUn_KI270749v1 45097 45 + 158759 TTTGTTAGTGTTGAATAATTGAT----ATCCTTGACTAGCTTTTTT-AAA s panTro5.chr1 101871376 49 - 228573443 TTTGTTAGTATTGACTaattgatattaattcttgactggctttttt-aaa i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 24859 49 - 126596 TTTGTTAGTGCTgaataattgatattaattcttgacaggctttttt-aaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55749347 46 + 99891981 TTTGTTAGTATTgaataattgatattaattcttgaca---tttttt-aaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133446204 49 - 185818997 TTTGTTAATATTgaataattgatactaattattgactaattttttt-aaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67275837 49 + 192294377 TTTGTTAATATTgaataattgatactaattattgactaattttttt-aaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2757880 49 + 3123512 TTTGTTAATATTgaataattgatactaattattgactaattttttt-aaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2478145 49 + 10077455 TTTGTTAATATTgaataattgatactaattattgactaattttttt-aaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5686167 50 + 127223203 TTTGTTAATATTgaataattgatactaattattgactaatttttttaaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1130330 50 - 1799296 TTTGTTAATATTgaataattgatactaattattgactaattttttttaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1729061 49 + 6934359 TTTGTTAATATTgaataattgttattaattattgactaacttttta-aaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108089149 49 - 128169293 GTTGTTAACATTGAATTattaatattaattcctgactaactttaaa-aaa i calJac3.chr8 I 9 I 3 s saiBol1.JH378145 709828 49 - 18371965 GTTGTTaacattgaataattaatgttaattcctgactaaatttttt-aaa i saiBol1.JH378145 I 4 I 2 s cebCap1.NW_016107540v1 1370236 49 + 3566421 GTCGTTAACATTgaataattaatattaattcctgactaaatttttt-aaa i cebCap1.NW_016107540v1 I 6 I 3 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12702895 6173 + 14340318 I e aotNan1.NW_018514471v1 1872816 61 - 9267652 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=1539637.000000 s hg38.chrUn_KI270749v1 45142 198 + 158759 A---AGAAATATTcacttcccaatttactctttggggccagtgttaccttgatacaaaaattagtccaaatagcatagaaaaat-aaaactacta------------taagtataaatgcaaaattccttaaaaaatactaacaaatcagaactagcaacatataaaagaattatacactatgacaaagtgaaatttatacaagtattcccagg s panTro5.chr1 101871425 201 - 228573443 aaagagaaatattcacttcccaatttattctgtgaggccagtgttaccttgatacaaaaattagtccaaatagcatagaaaaat-aaaaccacta------------taagtataaatgcaaaattccttaaaaaatactaacaaatcagatctagcaacatataaaagaattatacactatgacaaagtgaaatttagactagtaatctcagg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 24908 188 - 126596 a---ag---------cttctcgatctattctgtggggccagtgttaccttgatacaaaaattagtccaaatagcatagaaaaat-aaaactacta------------taagtataaatgcaaaattctttaaaaaatactaacaaatcagatctag-aacatataaaagaattataaactatgacaaagtgaaatttatacaagtaatcccagg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55749393 199 + 99891981 g---agaaatattcatttcccaatttattctgtagagccagtgttaccttgatacaaaaattagtccaaatatcatagaaaaataaaaactactg------------taagtataaatgcaaaattccttaaaaaatgctaacaaatcaaatctagcaatatataaaagaattatacactatgacaaagtgagatttatactagtaatcccagg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133446253 208 - 185818997 aaagagaaatattcacttcctactttgttctgtggggtcagcattaccttgatacaaaaattagtccaaatatcatagaaaaat-aaaactactatatc-----tcgtaagtataaatgcaaatgttctttaaaaatgctagcaaatcaaatctagcaacatataaaagaattatacactatgacaaagtgagatttatactagtcatcccagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67275886 207 + 192294377 aaagagaaatattcacttcctactttgttctgtggggtcagcattaccttgatacaaaaattagtccaaatatcatagaaaaat-aaaactac-atatc-----tcgtaagtataaatgcaaatgttctttaaaaatgctagcaaatcaaatctagcaacatataaaagaattatacactatgacaaagtgagatttatactagtcatcccagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2757929 208 + 3123512 aaagagaaatattcacttcctactttgttccgtggggtcagcattaccttgatacaaaaattagtccaaatatcatagaaaaat-aaaactactatatc-----tcgtaagtataaatgcaaatgttctttaaaaatgctagcaaatcaaatctagcaacatataaaagaattatacactatgacaaagtgagatttatactagtcatcccagg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2478194 208 + 10077455 aaagagaaatattcacttcctactttgttctgtggggtcagcattatcttgatacaaaaattagtccaaatatcatagaaaaat-aaaactactatatc-----tcataagtataaatgcaaatgttctttaaaaatgctagcaaatcaaatctagcaacatataaaagaattatacactatgacaaagtgagatttatactagtcatcccagg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5686217 208 + 127223203 aaagagaaatattcacttcctactttgttctgtggggtcagcattaccttgatacaaaaattcgtccaaatatcatagaaaaat-aaaactactatatc-----tcataagtataaatgcaaatgttctttaaaaatgctagcaaatcaaatctagcaacatataaaagaattatacactatgacaaagtgagatttatactagtcatcccagg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1130380 208 - 1799296 aaagagaaatattcacttcctactttgttctgtggggtcagcattatcttgatacaaaaattagtccaaatatcatagaaaaat-aaaactactatatc-----tcgtaagtataaatgcaaatgttctttaaaaatgctagcaaatcaaatctagcaacatataaaagaattatacactatgacaaagtgagatttatactagtcatcccagg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1729110 208 + 6934359 aaagagaaatattcacttcctactttattctgtggggtcagcattaccttgatacaaaaattagtccaaatatcatagaaaaac-aaaactactatatc-----tcgtaagtataaatggaaattttctttaaaaatgctagcaaatcgaatctagcaacatataaaagaattatacactatgacaaagtgagatttataccagtcatcccagg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108089201 208 - 128169293 ---gagacatagtcacttaccaatttattctgtggggccagtattgcgttgatacaaaaattagtccaaatatcataaaaaaa--ataactattatgtctcatgtcatgagtataaatgcaaaattccttt-aaaatcttagcaaatcaaatctagcaacatgtaaaagaattgcacactatgacaaagtgagatttataccagtaatcccagg i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 709879 209 - 18371965 ---gagaaatattcacttatcaatttattctgtggggccagtattaccttgatacaaaaattagtccaaatatcatagaaaaat-ataactactatatcttatgtcatgagtataaatgcaaaattccttt-aaaaacttaggaaatcaaatctagtaacatataaaagaattatacagtatgacaaagtgagatgtataccagtaatcccagg i saiBol1.JH378145 I 2 C 0 s cebCap1.NW_016107540v1 1370288 203 + 3566421 ---gagaaatattcacttactagtttgttctgt------agtattaccttgatacaaaaattaatccaaatatcatagaaaaat-ataacagctatatcttacgtcatgagtataaatgcaaaattccttt-aaaatctcagcaaataaaatctagcaacatataaaagaattatacactatgacaaagtgagatttataccaataatcccagg i cebCap1.NW_016107540v1 I 3 C 0 s aotNan1.NW_018514471v1 1872877 209 - 9267652 ---gagaaatattcacttgccaatttattctgtggggccagtattaccttgatacaaaaattagtccaaatatcatagaaaaat-ataactactatatcttatgtcatgagcataaatgcaaaattccttt-aaaatcttagcaaatcaaatctaacaacatataaaagaattatacactataacaaagtaagatttataccagtaatcccagg i aotNan1.NW_018514471v1 I 61 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12702895 6173 + 14340318 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I e panPan2.chr7 108498887 0 - 162613886 C a score=1119622.000000 s hg38.chrUn_KI270749v1 45340 157 + 158759 ttggtttaacagcccaaaatccattaaggtaatacatcttatccatagaataagaaacgagaattgcatgatcatctcgatagattcggaaaagacatttaacaaaatccaaatgctttaatgattaaaaata------aaaat----aaaaactcaatgaaccagg s panTro5.chr1 101871626 157 - 228573443 ttggtttaacagcccaaaatccattaaggtaatacatcttatccatagaataagaaacgagaattgcatgatcatgtcgatagattcggaaaagacatttaacaaaatccaaatgctttaacgattaaaaata------aaaat----aaaaactcaataaaccagg i panTro5.chr1 C 0 C 0 s panPan2.chr7 108498887 163 - 162613886 ttggtttaacagcccaaaatccattacggtaatacatcttatccatagaataagaaacaagatttgcatgatcacctcaatagattcagcaaaggcatttaacaaaatccaaatgttttaatgattaaaaataaaaatgaaaat----aaaaactcaatgagccatg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 25096 157 - 126596 ttggtttaacagcccaaaatccattaaggtaatacatcttatccatagaataagaaacgagaattgcatgatcatctcgatagattcggaaaagacatttaacaaaatccaaatgctttaatgattacaaata------aaaat----aaaaactcaatgaaccagg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55749592 163 + 99891981 gtggtttaacagcccaaaatccattacggtaatacatcttatccatagaataagaaacaagaattgcatgatcatctcaatagattcagaaaaggcatttaacaaaatccaaatgctttaatgattaaaaataaaaataaaaat----aaaaactcaatgaaccagg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133446461 150 - 185818997 ttggttgaacaacccaaaatccataaatgtaacatatcttatccatagaataagaaacaagaattgcatgatcatcacaaaagattcagaaaaagcatttaacaaaatccaaatgc-ttaataatta------------aaaat----aaaaactcaatgaaccaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67276093 150 + 192294377 ttggttgaacaacccaaaatccataaatgtaacatatcttatccatagaataagaaacaagaattgcatgatcatcacaaaagattcagaaaaagcatttaacaaaatccaaatgc-ttaataatta------------aaaat----aaaaactcaatgaaccaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2758137 150 + 3123512 ttggttgaacaacccaaaatccataaatgtaacatatcttatccatagaataagaaacaagaattgcatgatcatcacaaaagattcagaaaaagcatttaacaaaatccaaatgc-ttaataatta------------aaaat----aaaaactcaatgaaccaag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2478402 150 + 10077455 ttggttgaacaacccaaaatccataaatgtaacatatcttatccatagaataagaaacaagagttgcatgatcatcacaaaagattcaggaaaagcatttaacaaaatccaaatgc-ttaataatta------------aaaat----aaaaactcaatgaaccaag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5686425 144 + 127223203 ttggttgaacaacccaaaatccataaatgtaacatatcttatccatagaataagaaacaagaattgcatgatcatcacaaaagattcagaaaaagcatttaacaaaatccaaatgc-ttaataat------------------t----aaaaactcaatgaaccaag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1130588 150 - 1799296 ttggttgaacaacccaaaatctataaatgtaacatatcttatccatagaataagaaacaagagttgcatgatcatcacaaaagattcagaaaaagcatttaacaaaatccaaatgc-ttaataatta------------aaaat----aaaaactcaatgaaccaag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1729318 150 + 6934359 ttggttgaacaacccaaaatccataaatgtaacatatcttatccatagaataagaaacaagaattgcatgatcattgcaaaagagtcagaaaaagcatttaacaatatccaaatgc-ttaatgatta------------taaac----aaaaactcaatgaaccaag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108089409 122 - 128169293 ttggtttaacagccccaaattcataaatgtaata---------------------------------atgatcatcacaatagatgcagaaaaggtatttaacaaaatccaaatgctttaataatta------------aaaattttttaaaactcaataaaccggg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 710088 122 - 18371965 ttggtttaacagccccaaatccataaatgtaata---------------------------------atgatcatctcaatagatgcagaaaaggtatttaacaaaatccaaatgctttaaaaatta------------aaaatttttaaaaactCAATAAACCGgg i saiBol1.JH378145 C 0 I 304 s cebCap1.NW_016107540v1 1370491 122 + 3566421 ttggtttaacagccccaaatccataaatgtaata---------------------------------atgatcatctcaatagatgcagaaaaggtatttaacaaaatccaaatgctttaataatta------------aaaattttaaaaagctaaataaaccagg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1873086 122 - 9267652 ttggtttaacagccccaaatccataaatgtaata---------------------------------atgatcatctcaatagatgcagaaaaggtatttaacaaaatccaaatgctttaataatta------------aaaattttttataactcaataaaccagg i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12702895 6173 + 14340318 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I a score=26957.000000 s hg38.chrUn_KI270749v1 45497 3 + 158759 aat s panTro5.chr1 101871783 3 - 228573443 aat i panTro5.chr1 C 0 C 0 s panPan2.chr7 108499050 3 - 162613886 aat i panPan2.chr7 C 0 I 3 s gorGor5.CYUI01000522v1 25253 3 - 126596 aat i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55749755 3 + 99891981 aat i nomLeu3.chr17 C 0 I 3 s rheMac8.chr3 133446611 3 - 185818997 aat i rheMac8.chr3 C 0 I 3 s macFas5.chr3 67276243 3 + 192294377 aat i macFas5.chr3 C 0 I 3 s macNem1.NW_012011522v1 2758287 3 + 3123512 aat i macNem1.NW_012011522v1 C 0 I 3 s cerAty1.NW_012000909v1 2478552 3 + 10077455 aat i cerAty1.NW_012000909v1 C 0 I 3 s chlSab2.chr21 5686569 3 + 127223203 aat i chlSab2.chr21 C 0 I 3 s manLeu1.NW_012105809v1 1130738 3 - 1799296 aat i manLeu1.NW_012105809v1 C 0 I 3 s colAng1.NW_012115910v1 1729468 3 + 6934359 gat i colAng1.NW_012115910v1 C 0 I 3 s calJac3.chr8 108089531 3 - 128169293 aat i calJac3.chr8 C 0 I 3 s cebCap1.NW_016107540v1 1370613 3 + 3566421 aat i cebCap1.NW_016107540v1 C 0 I 2 s aotNan1.NW_018514471v1 1873208 3 - 9267652 aat i aotNan1.NW_018514471v1 C 0 I 3 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12702895 6173 + 14340318 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I e saiBol1.JH378145 710210 304 - 18371965 I a score=1580283.000000 s hg38.chrUn_KI270749v1 45500 179 + 158759 agagaactttctacaccagataca-tggcacctgtgaaaagccaacagcaagcatgaaacttaatggt-----aaaggatgctttcccgctatggtcagagataagaatagg--atatataatttgacctcttctagtcaatactgtactaaagattttatgcagggcaaatcggcaactaaaaaaa s panTro5.chr1 101871786 179 - 228573443 agagaactttctacaccagataca-tggcacctgcaaaaagccaacagcaagcacgcaacttaatggt-----aaaggatgctttcccgctatggtcagagataagaatagg--atatatactttgacctcttctagtcaacactgtactaaagattttatgcagggcaaattggcaactaaaaaaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 108499056 184 - 162613886 agagaactttctacaccagataca-tggcacctgtgaaaagccaacagcaaacattcaacttaatggtgaaagaaaggatactttcctgttatggtcagagataagaatagg--atatatactttgacctcttctagtcaacactgtaataaagattttatgcagggcaaatcagcaagtaaagaaa i panPan2.chr7 I 3 C 0 s gorGor5.CYUI01000522v1 25256 179 - 126596 agagaactttctacaccagatacc-tggcacctgagaaaagccaacaacaagcatgcaacttaatggt-----aaaggatgctttcccgctatgctcagagataagaatagg--atacatactttgacctcttctagtcaacactgtactaaagattttatgcagggcaaaccggcaactaaaaaaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55749761 183 + 99891981 agagaactttctacaccagattca-tggcacctgtgaaaagccaacag-aaacattcaacttaatggtgaaagaaaggatactttcctgttatggtcagaggtaagaatagg--gtatataattttacctcttctagtcaacattgtaccaaatattttatgcaggacaaatcagcaagtaaagaaa i nomLeu3.chr17 I 3 C 0 s rheMac8.chr3 133446617 184 - 185818997 agagtacttcctatgccagataca-tggcacttgtgaaaagccaagagcaaacattcagcttaatggtgaaataaaggatactttcccgctgtggtcagacacaagaataga--atatacaattttacctcttctaatcaatattgtactaaaggttttatgcaggacaaatcggcaagtaaagaaa i rheMac8.chr3 I 3 C 0 s macFas5.chr3 67276249 184 + 192294377 agagtacttcctacgccagataca-tggcacttgtgaaaagccaagagcaaacattcagcttaatggtgaaataaaggatactttcccgctgtggtcagacacaagaataga--atatacaattttacctcttctaatcaatattctactaaaggttttatgcaggacaaatcggcaagtaaagaaa i macFas5.chr3 I 3 C 0 s macNem1.NW_012011522v1 2758293 184 + 3123512 agagtacttcctacgccagataca-tggcacttgtgaaaagccaagagcaaacattcagcttaatggtgaaataaaggatactttcccgctgtggtcagacacaagaataga--atatacaattttacctcttctaatcaatattgtactaaaggttttatgcaggacaaatcggcaagtaaagaaa i macNem1.NW_012011522v1 I 3 C 0 s cerAty1.NW_012000909v1 2478558 184 + 10077455 agagtacttcctacgccagataca-tggcacttgtgaaaagccaagagcaaacattcagcttaatggtgaaataaaggatactttcccactgtggtcagagacaaaaataga--atatacaattttacctcttctagtcaatattgtactaaaggttttatgcaggaaaaattggcaagtaaagaaa i cerAty1.NW_012000909v1 I 3 C 0 s chlSab2.chr21 5686575 184 + 127223203 agagtacttcctacgccagataca-tggtacttgtgaaaagccaagagcaaacattcagcttaatggtgaaataaaggatacttccccgctgtggtcagagacaaggataga--atatacaattttacctcttctagtcaatattgtactaaaggttttatgcaggacaaatcggcaagtaaagaaa i chlSab2.chr21 I 3 C 0 s manLeu1.NW_012105809v1 1130744 184 - 1799296 agagtacttcctacgccagataca-tggcacttgtgaaaagccaagagcaaacattcagcttaatggtgaaataaaggatactttcccgctgtggtcagagacaaaaataga--atatacaattttacctcttctagtcaatattgtactaaaggttttatgcaggacaaattggcaagtaaagaaa i manLeu1.NW_012105809v1 I 3 C 0 s colAng1.NW_012115910v1 1729474 184 + 6934359 agagaacttcctacgccagataca-tggcacttgtgaaaagccaagagcaaacattcagcttaatggtgaaataaaggatactttcccgctgtggtcagagacatgaataga--atatacaattttaccacttctagtcaacattgtactaaagattttatgcagggcaaatcggcaagtaaagaaa i colAng1.NW_012115910v1 I 3 C 0 s calJac3.chr8 108089537 181 - 128169293 aaggaacttcgtacaccaggtaca-tggcacctgtgaaaagccaacagcaaacattcaacttaataatgaaagaaaggatacttt-cccatatgctcagagacaagaataggatatatatacttttacctcgtctagtcaacactgtactaaagattttatgctgggcaaatgg----gtaagggaa i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 710514 185 - 18371965 agggaacttcgtacaccagatacactggcacctgtgaaaagccaacaacaaacattcaacttaataatgaaagaaaggatactttccccatatggtcagagataagaatagg--atatatacttttacctcttctagtcaacatggttctaaagatttttttcagggccaatgggaaagtaaaggaa i saiBol1.JH378145 I 304 C 0 s cebCap1.NW_016107540v1 1370618 183 + 3566421 aaggaacttcatacaccagataca-tggcacctgtgaaaagccaacagcaaacattcaacttaataatgaaagaaacagtactttccccatatgatcagagacaagaatagg--atatata-ttttacctcttctagtcaactttgtactaaagattttattcagggcaaatgggcaagtaaaggaa i cebCap1.NW_016107540v1 I 2 C 0 s aotNan1.NW_018514471v1 1873214 186 - 9267652 agggaacttcatacaccagataca-tggcacctgtgaaaagccaacagcaaacattcaacttaataatgaaagaaagaatattttccccatatggtcagagataagaataggatatatatacttttaccttgtctagtcaacattgtactaaagattttatgctgggcaagtgggcaagtaaaggaa i aotNan1.NW_018514471v1 I 3 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e nasLar1.chr3 66878527 1717 + 179790006 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12702895 6173 + 14340318 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I a score=8952.000000 s hg38.chrUn_KI270749v1 45679 1 + 158759 t s panTro5.chr1 101871965 1 - 228573443 a i panTro5.chr1 C 0 C 0 s panPan2.chr7 108499240 1 - 162613886 t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 25435 1 - 126596 t i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55749944 1 + 99891981 t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133446801 1 - 185818997 t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67276433 1 + 192294377 t i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2758477 1 + 3123512 t i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2478742 1 + 10077455 t i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5686759 1 + 127223203 t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1130928 1 - 1799296 t i manLeu1.NW_012105809v1 C 0 C 0 s nasLar1.chr3 66880244 1 + 179790006 t i nasLar1.chr3 I 1717 N 0 s colAng1.NW_012115910v1 1729658 1 + 6934359 t i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108089718 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 710699 1 - 18371965 t i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1370801 1 + 3566421 t i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1873400 1 - 9267652 t i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12702895 6173 + 14340318 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I a score=12865438.000000 s hg38.chrUn_KI270749v1 45680 1417 + 158759 aagagtcacccatattgaacaggaagaaataaaactttatttgaaaataac--attcttgtgtatagaaaatgttaaggaatccactgaa----cgacagaacttgtaaattatttcagcaatattacagcatacaagataaatgtacaaaa-atcaattgcacacatctacaatgaaaaccccaaaatgaaattaagaaaacacttcaatttaaaatagcatcataaaaagaa------a-----taataattaatttggaaa-atgtgatacaaga-ttttactctgaaaattaaaaattattgtttaaagaatatctaagtaattagcaaacatcttacagccatgaattggaagat--------ttaatactgtagtactttacaatttgaactacagatttgatgaaatccctgcaagtattccaacagac-------------------------ttctgtctagaaactgacaagctgattctaaaatacacatggaattgt--------------------------------------aa-gggactcaaaatagccaaaataatcttgaaaaaagaaaacatattaggataattcacacccccatgctccaaaccttactgca-aagtatcagtaatcaagacaacaaaatactgatgaaggaaaaatatatagattgatggaagagaattgagagtccatatataaaactatgtgtctatggtcaatggattcttacagtggtgccatgtgcaattcaatgaagaagagacagcctttgaacaaa---c--tggttcaacaacgtacacgtggatcaccacttgcaaaataataaattggaaccctta-ccccaaagcatac-aaaaatattaactcaaatgaattaaagacacacatgccagagctagaataaaacatatgggaaaatcttcagcattttggatctagcaaagaaatagctgtaacatcaaaaacatgagcaacaaaataaaaattagatatttaaaatttcttaaaaattaaagacattggtgtttcaaaggaca-accaagcaagtcaaaaggcagctcaaaaattgtgagaaga-tatttg-aaaaacacgtatctatatgtctgt------atatatatgtatcttgaatatagaaaaattgttttaactcagtaacaaata-----tcccaactcaaaactgataaatgataggaatagatgtgtttcccaagaagatacatgaacggccaataatcccat-aaaaagatactcaatagcatcactcatcaggcaactacaaatcaaaaccacagttagatactctatggctagaactggccactttgtaaaataatttgatggcttctaaa-tatattaaacatagaattgtcatatgacccagaaatttattcctaggtatacacccagattattggaaagaggtgttcaaacacaaattgtacacaattatttttagcagcagtatttaaaatagccaaaggctgaacacaactcaaatgtca s panTro5.chr1 101871966 1415 - 228573443 aagagtcacccatattgaacgggaagaaataaaactttatttgaaaataac--attcttgtatatagaaaattttaaggaatccattgaa----cgatagaactagtaaattatttcagcaatattacagcatacaagataaatgtacaaaa-atcaattgcacacatctacaatgaaaaccccaaaatgaagttaagaaaacacttcaatttaaaatagcatcaaaaaaagaa------a-----taataattaatttggaaa-atgtgatacaaga-ttttactctgaaaatt-aaaattattgtttgaagaatatctaaataattagcaaacatcttccacccattaattggaagat--------ttaatattgtagtactttacaagttgaactacagatttcacgtaatccctgcaagtatcccaacagac-------------------------ttctgtctagaaactgacaagctgattctaaaatacacatgggattgt--------------------------------------aa-gggactcaaaatagccaaaatagtcttgataaaagaaaacatgttaggataattcacacccccgtgctccaaaccttacggca-aagcatcagtaatcaagacaacacaatagtgatgaaggaaaaatacatagattgat-gaagtgaattgagagtccatatataaaactatgtatctacagtcaatggattcttaaagtggtgccatgtgcaattcaatgaggaagagacagtctttgaacaaa---c--tgggtcaacaacgtacacgtggaacgccacttgcaaaatagtaaattggaagccttacccccaaagcatac-aaaaatattaactcaaatgaattaaagacatacatgcaagagctagaataaagcatatgcgaaaatcttcaggattttggatctagcaaagaaatagctgtaacaccaaaaacatgagcaacaaaataaaaattagatatttaaaatttcttaaaaattaaagacattggtgtttcaaaggaca-accaagcaagtcaaaaggcagctcaaaaattgtgagaaaa-tatttg-agaagcacatatctatatgtctgc------atatatatgtatcttgaatatagaaaaattgttttaactcagtaacaaaaa-----tcccaactcaaaactgataaatgataggaatagatgtatatcccaagaaggtacacgaacggtcaataatcccat-aaaaagatactcaacagcatcactcatcaggcaactacaaatcaaatccatagttagatactctatggctagaactggccactttggaaaataggttgatggcttctaaa-tatattaaacatagtatagtcatatgacccagaaatatattcctaggtatacccccagagtattggaaagaggtgttcaaacgcagattgtgcacaagta-ttttaacagcagtatttaaaatagccaaaggctgaacacaactcaaatgtca i panTro5.chr1 C 0 C 0 s panPan2.chr7 108499241 1421 - 162613886 aagagtcacccttattgaataggaagaaataaaactttatttgcaaataacatattcttgtatatagaaaattttaaggaatccactgaa----caatagaactagtaaattatttcagcaatattacaacatacaagataaatatacaaag-atcagttgcacacatctacaatgaaaaccccaaaatgaaattaagaaaacacttcaatttacaatagcatcaaaaaatgaa------a-----taataattaatttggaaa-atgtaatacaata-ttttactcagaaaattaaaaattattgtttaaagaagatctaaataattagcaaacatcttatagtcatgaattggaagat--------ttaatattgtagtactttacaatttgaactacagatttgatgaaatccctgcaagtatcccaacagac-------------------------ttctgtctagtaactgacaagctgattctaaagtacacatggaattgt--------------------------------------aa-gggactcaaaatagccaaaataatcttgaaaaaagaaaacatattaggacaattcacacccctgtgctccaaaccttactgta-aagcatcaataatcaagacaacatgatactgatgaaggaaaaatatatagattgatggaagagaattgacagtccatatataaaactatgtatctatagtcagtggattcttacagtggtgccatgtgcaattcaatgaggaagagacagtctttgaacaaa---ctttgggtccacaacgtacatgtggatcaccacttgcaaaataataaattcaaaccctta-ccccaaagcatac-aaaaatattaactcaaatgaattaaagacatacatgcaaaaactagaataaagcatatggggaaatcttcaggattttggatctagcaaagaaatagctataacaccaaaaacatgagtaacaaaataaaaattagatatttaaaatttcttaaaaattaaagacattggtgtttcaaaggaca-accaagcaagtcaaaaggcagctcaaaaattgtgagaaga-tatttg-aaaaactcatatctatatgtctgt------atatatatgtatcttgaatatagaaaaattgttttaactcagtaacaaata-----tcccaacttaaaactgataaaggataggaatagatatgtttcccaagaagatacacaaatggtcaataatcccat-aaaaagatactcaattgcattactcatcaggcagttacaaatcaaaaccacagttagatactcaatggctagaactggccattttggaaaatagtttgatggcttctaaa-tatattaaacatagaattgtcatatgacctagatatttattcctaggcatacacacagattattggaaagaagtgttcaaacacaaatcgtacacaagtacttttagcagcactatttaaaatagccaaaggctgaacacaactcagatgtca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 25436 1418 - 126596 aagagtcaccgatattgaacaggaagaagtaaaactttatttgaaaataac--attattttctatagaaaattttaaggaatccactgaa----tgatagaactcgtaaattatttcagcaatattacagcatacaagataaatgtacaaaatatcatttgcacacatctgcaatgaaaaccccaaaatgaaattaaggaaacacttcaatttaaaatagcatcaaaaaaagaa------a-----taatacttaatttggaaa-atgtgatacaaga-ttttactctgaaaattaaaaattattgtttaaagaatatctaaataattagcaaatatcttccacccatgaattggaagat--------ttaatgttgtaattctttgcaatttgaactacagatttgatgaaatccctgcaagtatcccaacagac-------------------------ttctgtctagaaaatgacaagctgattctaaaatacacatggaattgt--------------------------------------aa-gggactcaaaatagccaaaataatcttgaaaaaagaaaacatgttaggataattcacacccccatgctccaaaccttactgca-aagtatcagtaatcaagacaacaaaatactgatgaaggaagaatatatagattgatggaagagaattgagagtccatatataaaactatgtgtctctagtcaatggattcatacagtggtgccatgtgcaattcaatgaggaagagacagtctttgaacaaa---c--tgggtcaacaacgtacacgtggattgccacttgcaaaatagtaaattggaacactta-ccccaaagcatac-aaaaatattaactcaaatgaattaaagacacacatgcaagagctagaataaagcatatgggaaaatattcaggattttggatctagctaagaaatagctgtaaccccaaaaacatgagcaacaaaataaaaattagatatttaaaatttcttaatacttaaagacattggtgtttcaaaggaca-acaaagaaagtcaaaaggcagctcaaaaattgtgagaaga-tatttg-aaaaacacgtatctatatctctgt------atatatatgtatcttgaatatagaaaaattgttttaactctgtaacaaata-----tcccaactcaaaactgataaatgataggaatagatgtgtttcccaagaagatgcacgaacggtccagaatcccat-aaaaagatactcagtagcatcactcatcaggcaactacaaatcaaaaccacagttagatactctatggctagaactggccactttggaaaataatttgatggcttctaaa-tatatgaaacatagaattgtcatatgacccagaaatttattcccaggtatacacccagattattggaaagaggtgttcaaacacaaattgtacacaagtatttttagcagcagtctttacaatagccaaaggctgaacacaactcaaatgtca i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55749945 1424 + 99891981 aagagttgcccttattgaacaggaagaaataaaactttatttgcaaataacgtattcttgtatatagaaaattttaaggaatccaccgaa----tgatagaactagtaaattatttcagcaatattacagcatacaagataaatatacaaaa-atcagttgcacacatctacaatgaaaaccccaaaatgaaattaagaaaacacttcaatttacaatagcatcaaaaaatgaa------a-taattaataattaatctggaaa-atgtaatacaata-ttttactctgaaaattaaaaattattgtttaaagaagatctaaataattagcaaacatcttacagccattaattggaagat--------ttaatattgta-taatttacaatttgaactacagatttgatgaaatccctgcaagtatcccaacagac-------------------------ttctgtctagaaactgacaagctgttactgaaatacacatggtattgt--------------------------------------aa-gggactcaaaatagccagaataatcttgaaaaaagaaaatatattaggataattcacacccgcgtcctccaaaccttactgca-aagcatcaataatcaagacaacatgatactgatgaaggaaaaatatatagattgatggaagagaattgagagtccatatataaaactatgtatctatagtcaatggattcttacagtggtgccatgtgcaattaaatgaggaagagacagtctttgaacaaa---ctttgggtccacaatgtacatgtgaatcaccacttgcaaaataataaattcaaacgctta-ctccaaagcatgc-aaaaatattaactcaaatgaattaaagacatacatgcaagagctagaataaagcatataggaaaatcttcaggattttggatctagcaaggaaatagctataacaccaaaaacatgagcaacaaaataaaaattagatatttaaaatttcttaaaaattaaagacattggtgtgtcaaaggaca-accaagcaagtcaaaaggcagctcaaaaattgtgagaaga-tatttg-aaaaacacatatctatatgtctgt------atatatatgtatcttgaacatagaaaaattgttttaactcagtaacaaata-----tcccaacttaaaactgataaaggataggaatagatatgtttcccaagaagatacacgaacggtcaataatcccat-aaaaagatactcagtagcatcactcatcaggcaattacaaatcaaaaccacagttagatactcaatggctagaactggccactttggcaaatagtttgatggcttctaaa-tatattaaacatagaattgtcgtatgacctagaaatttattcctaggcatacacccagattattggaaagaggtgttcaaacacaaattgtacacaagtatttttagcagcagtatttaaaatagccaaaggctgaacacaactcaaacgtca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133446802 1426 - 185818997 aagagttgtccatattgaacagaaagaaataaaactttgtttgcaaatagcatattcttgtttatagaaaatgttaaggaatcccctgaataagtgatagaactagtaaattatttcagcaatattacagcatacaaaataaatatacaaaa-atcaattgcacgcatctacaatgaaaacgtcaaaatgaaattaagaaaacacttcaatttacaatagcatcaaaaaaatga------a-------ataattaatttggaaacatgtaatacaata-ttttactctgaaaattaaaaagaattgtttaaagaagatctaaataattagcaaacatcttacagccattaattggaagat--------ttaatattgtagtacttgacaatttgaactacagatttgatgaaatccctgcaagtatcctatcagac-------------------------ttctgtctagaaactaacaaactgattctaaaatacacatggaattgt--------------------------------------aa-gggactcaaaatagccaaaataatcttgaaaaaagaaaacatattagaataattcacacccccatactccaaaccttactgca-aagcatcaataatcaagacaacacgatattgatgaaggaaaaatatatggattgatggaagagaattgagagtccatatataaaactacgtatctatagtcaatggattcttacagtggtgccatgtgcaattcaatgaggaagagatagtctttgaacaaa---ctttgggtcaacaacctacatgtggatcaccactcgcaaaataataaatttgaaccctta-ccccaaagcatac-aaaaatattaactcaaatgaattaaaggcatacatgcaagagctagaagaaagcatgtgggaaaatcttcatgattttggatctagcaaagaaatagctataacaccaaaaacatgagcaacaaaataaaaattagatatttaaaatttcttaaaaattaaagacattggtgcttcaaaggaca-accaaagaagtcaaaaggcagctcaaaaattgtgagaaga-tatttg-aaaaacacatatctatatgtctac----atatatatatgtatcttgaatatagaaaaattgttttaacttagtaacaaata-----tcccaacttaaaactgataaacgatatgaatagatatatttcccaagaagatacacgaacagtcaataatcccat-aaaaaaatgctcaatagcattactcatcaagcaactacaaatcaataccacaattagatactcaatggttagaactggccactttggaaaatagtttgatagcttctaaa-tatattaaacatagaattgtcatatgacctagaaatgtattcctcggtatatacccagattatcagaaacaggtgttcaaacacaaattgcacacaagtatttttagcagcagtatttaaaatagccaaagactgaacacaactcaaatgtca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67276434 1430 + 192294377 aagagttgtccatattgaacagaaagaaataaaactttgtttgcaaatagcatattcttgtttatagaaaatgttaaggaatcccctgaataagtgatagaactagtaaattatttcagcaatattacagcatacaaaataaatatacaaaa-atcaattgcacgcatctacaaggaaaacgtcaaaatgaaattaagaaaacacttcaatttacaatagcatcaataaaatga------a-------ataattaatttggaaaaatgtaatacaata-ttttactctgaaaattaaaaagaattgtttaaagaagatctaaataattagcaaacatcttacagccattaattggaagat--------ttaatattgtagtacttgacaatttgaactacagatttgatgaaatccctgcaagtatcctatcagac-------------------------ttctgtctagaaactaacaaactgattctaaaatacacatggaattgt--------------------------------------aa-gggactcaaaatagccaaaataatcttgaaaaaagaaaacatattagaataattcacacccccatactccaaaccttactgca-aagcatcaataatcaagacaacacgatattgatgaaggaaaaatatatggattgatggaagagaattgagagttcatatataaaactacgtatctatagtcaatggattcttacagtggtgccatgtgcaattcaatgaggaagagatagtctttgaacaaa---ctttgggtcaacaacctacatgtggatcaccactcgcaaaataataaatttgaaccctta-ccccaaagcatac-aaaaatattaactcaaatgaattaaaggcatacatgcaagagctagaagaaagcatgtgggaaaatcttcatgattttggatctagcaaagaaatagctataacaccaaaaacatgagcaacaaaataaaaattagatatttaaaatttcttaaaaattaaagacattggtgcttcaaaggaca-accaaagaagtcaaaaggcagctcaaaaattgtgagaaga-tatttg-aaaaacacatatctatatgtcgacatatatatatatatgtatcttgaatatagaaaaattgttttaacttagtaacaaata-----tcccaacttaaaactgataaacgatatgaatagatatgtttcccaagaagatacacgaacagtcaataatcccat-aaaaaaatgctcagtagcattactcatcaagcaactacaaatcagtaccacaattagatactcaatggttagaactggccactttggaaaatagtttgatagcttctaaa-tatattaaacatagaattgtcatatgacctagaaatgtattcctcggtatatacccagattatcggaaacaggtgttcaaacacaaattgcacacaagtatttttagcagcagtatttaaaatagccaaagactgaacacaactcaaatgtta i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2758478 1426 + 3123512 aagagttgtccatattgaacagaaagaaataaaactttgtttgcaaatagcatattcttgtttatagaaaatgtgaaggaatcccctgaataagtgatagaactagtaaattatttcagcagtattacagcatacaaaataaatatacaaaa-atcaattgcacgcatctacaatgaaaacgtcaaaatgaaattaagaaaacacttcaatttacaatagcatcaaaaaaatga------a-------ataattaatttggaaaaatgtaatacaata-ttttactctgaaaattaaaaagaattgtttaaagaagatctaaataattagcaaacatcttacagccattaattggaagat--------ttaatattgtagtacttgacaatttgaactacagatttgatgaaatccctgcaagtatcctatcagac-------------------------ttctgtctagaaactaacaaactgattctaaaatacacatggaattgt--------------------------------------aa-gggactcaaaatagccaaaataatcttgaaaaaagaaaacatattagaataattcacacccccatactccaaaccttactgca-aagcatcaataatcaagacaacacgatattgatgaaggaaaaatatatggattgatggaagagaattgagagtccatatataaaactacgtatctatagtcaatggattcttacagtggtgccatgtgcaattcaatgaggaagagatagtctttgaacaaa---ctttgggtcaacaacctacatgtggatcaccactcgcaaaataataaatttgaaccctta-ccccaaagcatac-aaaaatattaactcaaatgaattaaaggcatacatgcaagagctagaagaaagcatgtgggaaaatcttcatgattttggatctagcaaagaaatagctataacaccaaaaacatgagcaacaaaataaaaattagatatttaaaatttcttaaaaattaaagacattggtgcttcaaaggaca-accaaagaagtcaaaaggcagctcaaaaattgtgagaaga-tatttg-aaaaacacatatctatatgtctac--atatatatatatgtatcttgaatatagaaaaattgttttaacttagtaacaaata-----tcccaacttaaaactgataaacgatatgaatagatatgtttcccaagaagatacacgaacagtcaataatcccat--aaaaaatgctcaatag-attactcatcaagcaactacaaatcaataccacaattagatactcaatggttagaactggccactttggaaaatagtttgatagcttctaag-tatattaaacatagaattgtcatatgacctagaaatgtattcctcggtatgtacccagattatcggaaacaggtgttcaaacacaaattgcacacaagtatttttagcagcagtatttaaaatagccaaagactgaacacaactcaaatgtca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2478743 1426 + 10077455 aagagttgtccatattgaacagaaagaaataaaactttgtttgcaaatagcatattcttgtttatagaaaatgttaagaactcccctgaataagtgatagaactagtaaattatttcagcaatattacagcatgcaaaataaatatacaaaa-atcaattgcacacatctacaatgaaaacgtcaaaatgaaattaagaaaacacttcaatttacaatagcatcaaaaaaatga------a-------ataattaatttggaaaaatgtaatacaata-ttttactctgaaaattaaaaagaattgtttaaagaagatctaaataattagcaaacatcttacagccattaattggaagat--------ttaatatagcagtacttgacaatttgaactacagatttgatgaaatccctgcaagtatcctatcagac-------------------------ttctgtctagaaactaacaaactgatgctaaaatacacaaggaattgt--------------------------------------aa-gggactcaaaatagccaaaataatcttgaaaaaagaaaacatattaggataattcacacccccatactccaaaccttactgca-aagcatcaataatcaagacaacacgatattgatgaaggaaagatatatggattgatggaagagaattgagattccatatataaaactatgtatctatagtcaatggattctcacagtggtgccatgtgcaattcaatgaggaagagatagtctttgaacaaa---ctttgggtcaacaacctacatgtggatcaccacttgcaaaataataaatttgaacccttg-ccccaaagcatac-aaaaatattaactcaaatgaattaaaggcatacatgcaagagcttgaagaaagcatgtgggaaaatcttcatgattttggatctagcaaagaaatagctataacaccaaaaacatgagcaacaaaataaaaattagatatttaaaatttcttaaaaattaaagacattggtgcttcaaaggaca-accaaacaagtcaaaaggcagctcaaaaattgtgagaaga-gatttg-aaaaacacatatctatatgtctac----atatatatatgtatcttgaatatagaaaaattgttttaacttagtaacaaata-----tcccaacttaaaactgataaacaataggaacagatatgtttcccaagaagatacacaaacagtcaataataccat-aaaaaaatgctcaatagcattactcatcaggcaactacaaatcaaaaccacagttagatacTCAATGGCTAGAACTGgccactttggaaaatagtttgatagcttctaaa-tatattaaacatagaattgtcatatgaactagaaatgtattcctcagtatatacccagattatcggaaagaggtgttcaaacacaaattgtacacaagtatttttagcagcagtatttaaaatagccaaagactgaacacaactcaaatctca i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5686760 1427 + 127223203 aagagttgtccatattgaacagaaagaaataaaactttgtttgcaaatagcatattcttgtttatagaaaatgttaaggaatctcctgaataagtgacagaactaggaaattatttcagcaatattacagcatacaaaataaatatacaaaa-atcaattgcacacatctacaatgaaaacatcaaaatgaaattaagaaaacacttcaatttacaatagcatcaaaaaaatga------a-------ataattaatttggaaaaatgtaatacaata-ttttactctgaaaattaaaaagaattgtttaaagaagatctaaataattagcaaacatcttatagccattaattggaagat--------ttaatattgtaatacttgacaatttgaactacagatttgatgaaatccctgcaagtatcctatcagac-------------------------ttctgtctagaaactaacaaactgattctaaaatacacatggaattgt--------------------------------------aa-gggactcaaaatatccaaaataatcttgaaaaaagaaaacatattaggataattcacacccccatactccaaaccttactgca-aagcgtcattaatcaagataacacgatattgatgaaggaaaaatatatggattgattgaagagaattgagagtccatatataaaactatgtatctatagtcaatggattcttacagtggtgccatgtgcaattcaatgaggaagagatagtcttttaacaaa---ctttgggtcaacaacctacatgtggatcaccactcgcaaaataataaatttgaaccctta-ccccaaagcatac-aaaaatattaactcaaatgaattaaaggcatacatgcaagagctagaagaaagcatgtgggaaaatcttcatgattttggatctagcaaagaaatagctataacaccaaaaacatgagcaacaaaataaaaattagatatttaaaatttcttaaaaattaaagacattggtgcttcaaaggaca-accaaacaagtcaaaaggcagctcaaaaattgtgagaaga-tatttg-aaaaacacatatctatatgtctac----atatatatatgtatcttgaatatagaaaagttgttttaacttagtaacaaata-----tcccaacttaaaactgataaacgataggaatagatatgtttcccaagaagatacacgaacagtcaataatcccataaaaaaaatgctcaatagcattactcatcaggcaactacaaatcaaaaccacaattagatacTCAATGGCTAGAACTGgccactttggaaaatagtttgatagcttctaaa-tatattaaacatggaattgtcatatgatctagaaatgtattcctcggtatatacccagattatcggaaacaggtgttcaaacacaaattgtacacaagtatttttagcagcagtatttaaaatagccaaagactgaacacaactcaaatgtca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1130929 1426 - 1799296 aagagttgtccatattgaacagaaagaaataaaactttgtttgcaaatagcatattcttgtttatagaaaatgttaagaaatcccctgaataagtgatagaactagtaaattatttcagcaatattacagcatacaaaataaatatacaaaa-atcaattgcacacatctacaatgaaaacgtcaaaatgaaattaagaaaacacttcaatttacaatagcatcaaaaaaatga------a-------ataattaatttggaaaaatgtaatacaata-ttttactctgaaaattaaaaagaattgtttaaggaagatctaaataattagcaaacatcttacagccattaattggaagac--------ttaatattgtagtacttgacaatttgaactacagatttgatgaaatccctgcaagtatcctatcagac-------------------------ttctgtctagaaactaacaaactgattctaaaatacacaaggaattgt--------------------------------------aa-gggactcaaaatagccaaaataatctggaaaaaagaaaacatattaggataattcacacccccatactccaaaccttactgca-aagcatgagtaatcaagacaacacgatattgatgaaggaaagatatatggattgatggaagagaattgagattccatgtataaaactacgtatctatagtcaatggattctcacagtggtgccatgtgcaattcaatgaggaagagatagtctttgaacaaa---ctttgggtcaacaacctacatgtggatcaccactcgcaaaataataaatttgaacccttg-ccccaaagcatac-aaaaatattaactcaaatgaattaaaggcatacatgcaagagcttgaagaaagcatgtgggaaaatcttcatgattttggatctagcaaagaaatagctataacaccaaaaacatgagcaataaaataaaaattagatatttaaaatttcttaaaaattaaagacattggtgcttcaaaggaca-accaaacaagtcaaaaggcagctcaaaaattgtgagaaga-gatttg-aaaaacacatatctatatgtctac----atatatatatgtatcttgaatatagaaaaattgttttaacttagtaacaaata-----tcccaacttaaaactgataaacgataggaatagatatgtttcccaagaagatacacaaacagtcaataataccat-aaaaaaatgctcaatagcattactcatcaggcaaccacaaatcaaaaccacagttagatacTCAATGGCTAGAACTGgccactttggaaaatagtttgatagcttctaaa-tatattaaacatagaattgtcatatgaactagaaatgtattcctcggtatatacccagattatcggaaacaggtgttcaaacacaaactgtacacaagtatttttagcagcagtatttaaaatagccaaagactgaacacaactcaaatgtca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1729659 1494 + 6934359 aagagttgtccatattgaacagaaagaaataaaactttatttgcaaatagcatattcttgtttatagaaaatgttaaggaatcccctgaataagtggtagagctagtaaattatttcagcaatattacagcatacaaaataaatatacaaaa-atcaattgcagacatctacaatgaaaatgtcaaactgaaattaagaaaacacttcaatttacaatagcatcaaaaaaagaaataatta-------ataattaatttggaaaaatgtaatacaata-ttttactctgaaaattaaaaagaattgtttaaagaagatctaaataattagcaaacatcttacagccattaattggaagat--------ttaatattgtagtacttgacagtttgaactacagattcgatgaaatccctgcaagtatcctaacagacttctgtctagaaactgacaagctggttctgtctagaaactgacaagctgattctaaaatacacatggactgattctaaaatacacatgaactcaaggaactcaaaatagtcaa-gggattcaaaatagccaaattaatcttgaaaaaagaaaacatattagggtaattcacacccccacactccaaacattactgca-aagcatcaataatcaagacaacacgatattgatgaaggaaaaatatatagattgatggaagagaattgagattccatatataaaactatgtatctatagtcaatggattcttacagtggtgccatgtgcaattcaatgaggaagagatagtctttgaacaaa---ctttgggtcaacaacctacatgtggatcaccactcgcaaaataataaattcgaaccctta-ccccaaagcatac-aaaaatatgaactcaaatgaattaaaggcatacatgcaagagctagaagaaagcatgtgggaaaatcatcatgattttggatctggcaaagaaataactctaacaccaaaaacaagagcaacaaaataaaaattagatatttaaaatttcttaacaattaaagacgttggtgcttcaaaggaca-accaaacaagtc-aaaggcagctcaaaaattgtgagaaga-tatttg-aaaaacacatatctcaatgtctgc----atatatatatggatcttgaatatagaaaaattgttttaactcagtaacaaata-----tctcaacttaaaactgataaacgataggaatagatatgtttcccaagaagatacatgaacagtcaataatcccat-aaaaaaatgctcaatagcattactcatcaggcaactacaaatcaaaaccacaattagataATCAATGGCTAGAACTGgccactttggtaaatagtttgatggcttctaaa-tatattaaacatagaattgtcatatgacctagaaatgtattcctcagtatatacccagattatcggaaacaggtgttccaacacaaactgtacacaagtatttttagcagcagtatttaaaatagccaaaggctgaacagaactccaatgtca i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108089719 1413 - 128169293 aagagttgcccgtattgaacaggaagaaataaaactttatttgtaaataacatattcttgtatgtagaaaagtttaaggagttcactga-------atataactagtaaattatttcagtaatattacagcatacaagataaatatataaaa-ctcaattatacacatctacaatgaacaccccaaaatgaaattaagaaaacacttcaatttataatagcatcaaaaaaataa------aatgattaataatcaatttggaat-atataatacaatatttttactctgaaaattaaaa---attgtttagagaagatctaaataaacagcaaaaatcttacagccaagaac------attgatattgttaagatggcagtactttacaatttgaactacagattttatgaaatccctgcaagaatcc------ac-------------------------ttctatctgaaaactgacaagctgattctaaagtacacatggacttct--------------------------------------ca-gggactcaaaatcaacaacatagtcttgaaaaagaaaaacttagtaggataaatcatacctctgtacttcaaaccttactgcatcattatcagtaatcaagacaacatgatactgatgaaggaaatatatatacattgatggaagagaatttagagcccatatataaaactatgtgtctataggcaatagattcttacagtgatgccatgtgcaattcaatgaggaaaagatagtctctgaataaa---tgttgggtcaacaacgtacatgtggatcaccacctgcaaaataataaatttgaactctta-ccccaatgcatacaaaaaatattgactcaaatgaattaaagatgcacatgcacgagctagaagaaagcatgtgggaaaattttcatgactttggatctagcaaagatacagctatagccccaaagacatgagcaacaaaataaaaatcagatatttaaattttcttaataattaaagacat----------aaggacacatcaagcaagtcaaaaggcaactcaaaaattgtgaaaaaa-tatttg-aaaaacacatactcata--tctat------atctgtatgtatcttgaatataaaaaaattgttttaacacagtaacaaaaa-gtcatcctaacttaaaactgaaaaaggatataaataaatacgtttcccaagaagatacacaaatggtcagtaaccccat-gaaaagatgctcaatagcattactcatcatgcaactacaaatcaaatccacaGTTGTATATTCAATGGCTATAATTGTccactttggaaaatagtttgatggattctaccttatattaaacatagaattgtcatatgatctagaaatttattcctaggtatatacccagattattggaaacacatgttcaaacacaaattgtacacaagtaattttagcagcagtactgaaaatagccaaagggtgaacacaactcaaatgtca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 710700 1426 - 18371965 aagagttgcccatattgaacagaaagaaataaaactttctttgtaaataacatactctcgtgtatagaaaagtttaaggagttcactgaataactgatagaactagtaaattatttcagtaatattacagcatacaagataaatatacaaaa-ctcaattatacacgtctataatgaacacaccaaaatgaaattaagaaaa-----caatttataatggcatcaaaaa---ta------aatgatt-gtaatcaatttggaaa-atataatacaatatttttactctgaaaattaaaa---attgtttaaagaagaactaaataaacaacaaaaatcttacagccaagaattggaagatttatactgttaagatggcagtactttacaatttgaactacagattttatgaaatctctgcaagaatcccaatagac-------------------------ttctatctgacaatttacaagctgattctaaagtacacatggaattgt--------------------------------------aaggggactcaaaatcacca------ccttgaaaaagaaaaacatagtaggataattcacacctctgtacttcataccttactgca-aagtatcaggaatcatgacaacatgatactgattaaggaaaaatacatagattgatggaagaggattgagagcccatatataaatctatgtgtccatagtcaatagattcttacagtgatgccatgtgcaattcaatgaggaaaag--aatctttgaataaacattgtcgggtcaacaacgtacatgtggatcagcacctgcaaaataataaatttgaactctta-ccccaatgcatac-aaaaatattaactcaaatgaattaaagatgtacatgcatgagctagaagaaagcatatgggaaaattttcatgactttggatccagcaaagatatagctatagcaccaaagacatgagcaacaaaataaaaattagatactttaaatttcttaataattgaagacatttgtgcttcaaaggacacatcaagcgagtcaaaaggtaactcaaaaattgtgaaaaaa--atttg-aaaaacacatacctata--cctat------atctgtatgtatcttgaatatagaaaaattg-tttaacacagtaacaaaaatgacatcctaacttaaaactgataaaggatataactaaatatgtttcccaggaagacacatgaatggtcaataatcccat-gaaaagatgctcaatagcattactcatcatgcaactacaaatcaaatccacagttagatactcaatggctaaaactgtccactttggaaaatagtttgatggattctatcttatattaaacatagaattgtcatatgacctagaaatttattcctaggtatatacccagattaatggaaacaggtgttcaaacacaaattgtacacaagtaattttagcaacagtactcaaaatagtcaaagggtgaacacaactcatatgtca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1370802 1375 + 3566421 aagagttgcccatattgaacaggaagaaataaaactttatttgtaaataacatgttcttgtatatagaaaagtttaaggagttcactgaataactgatagaactagtaaattatttcagtaatattacagcatgcaagataaatatacaaaa-ctcaattatacacatctacaatgaacatcctacaatgaaattaagaaaacacttcaatttataatatcatcaaaaaaataa------aatgattagtaatcaatttggaaa-atataatacaatatttttactctgaaaattaaaa---attgcttaaagaagatctaaacaaacagcaaaaatcttacagccaagaattggaagatttatattgttaagatggcagtactttacaatttgaactacagactttatgaaatccctgcaagaatcccaacagac-------------------------ttctatctgaaaactgacaagctgattctaaagtacacatggaattgt--------------------------------------aa-gggactcaaaatcaacaaaataatcttgaaaaagaaaaacctagtaggataattcacacctttgtacttcaaaccttactgca-aagtatcagtaatcaagacaacatgataccgatgaaggaaaaatatatagattgatgaaagacaattgagagcccacatataaaactatgtgtctatagtcagtagattcttacagtgatgccatgcacaattcaatgaggaaaag--agtctttgaataaacattgttgggtcaacaacgtacatgtggatcgccacctgcaaaataataaatttgaactctta-ccccaatgcatac-aaaaatattaactcaaatgaattaaagatgcacatgcaagaactagaaaaaagcatatgggaaaattgtcatgactttggatctagcaaagatatagctacagcaccaaagacataagcaatgaaataaaaattagatatttaaaatttcttaataattaaagacatttgtgtttcaaaggacacatcaaacaagtcaaaaggcaactcaaaaattgtgaaaaaagcatttgaaaaaacacatacct-----------------------------------------------------------------------------acctaaaactgataaaggatataaataaatacgttttccaagaagatacacgaatgatcaataatcccat-gaaaagatgctcaatagcattactcatcatgcaactacaaatcaaatccacagttagatgcTCAATGGCTAGAATTGTccactttggaaaatagtttgatggattctaccttatattaaacatagtattgtcatatgacctagaaatttattcctaggtgtatacccagattattggaaacaggtgttcaaacacaaattgtacacaagtaattttagcagcagtactcaaaatagccaaagggtgaacacaactcaaatatca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1873401 1431 - 9267652 aagagttgcccatattgaacaggaagaaataaaactttatttgtaaataacatattcttgtatatagaaaagtttaaggaggtcactgaataactgatagaactagtaaattatttcagtaatattacagcatgcaaggtaaatatacaaat-ctcaattatacacatctacaatgaacacccctaaatgaaattaagaaaacacttcaatttataatagcatcaaaaaaataa------aatgattagtaatcaatttggaaa-acataatacaatatttttactctgaaaattaaaa---attgtttaaagaatatctaaataaacagcaaaaatcttacagccaagaattggaagatttatattgttaagatggcagtagtttacaatttgaactacagattttatgaaatccctgcaagaatcccaacagac-------------------------ttctatctgaaaaccgacaagctgattctaaaatacacatggaattgt--------------------------------------aa-gggactcaaaatcacca------tcttgacaaagaaaaacatagtaggataattcacacctctgtacttcaaaccttactgca-aagtatcaggaatcaaggcaacatgatattgatgaaggaaaaatacatagattgatggaagaggattgagagcccatatctaaaactatgtgtctatagtcaatagattcttacagtgatgccatgtgcaattcaatgaggaaaagatagtctttgaacaaacattgctgagtcaacaatgtatacatggatcaccacctgcaaaataataaatttgaactctta-ccgcaatgcatgc-aaaaatattaactca----aattaaagatgcacatgcacgagctggaaggaagcatatggaaaaattttcatgactttggatctagcaaagatatagctatagcaccaaagacatgagcaatgaaataaaaattagatatttaaaatttcttaataattaaagacat-tgtgcttcaaaggacacatcaagcgagtcaaaaggcaactcaaaaattgtgaaaaaaatatttg-aaaaacacatacctata--tctat------atctgtatgtatcttgaatatagaaaaattgttttaagacagtaacaaaaa-gtcatcctaacttaaaactgataaaggatataaataaatacgtttcccaagaagatacacgaatggtcaataatcccat-gaaaagatgctcaatagcattactcatcatgcaactacaaatcaaatccacagttagatacTCAATGGCTAGAGTTGTccactttggaaaatagtttgatggattctaccttatattaaccatagaattgtcatatgacctagaaatttattcctaggtgtatacccagatttttggaaacgggtgttcaaacacaaattgtacac--gtaattttagcagcagaactcaaaatagccaaagggtgaacacaactcaaatgtca i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12702895 6173 + 14340318 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I a score=2540666.000000 s hg38.chrUn_KI270749v1 47097 271 + 158759 ataaaaatattattggataaacaaaatgt--tatatccatgaaattgaatgttatacggttataaaaagaaataaagtaccaatacgtacatgaaccttgatagcattatgccaactgaaagaa------gccaggcacaaaaggccacctattgtatg-attctatttagatgaaaac----agaataggaaagtttatagag-acagaaaacagatttgtggttgcttaggattgagtaggggatgagtctataggatgttaacagctagagaaggtggggtt-- s panTro5.chr1 101873381 271 - 228573443 ataaaaatattattggataaacaaaatgt--tatatccatgaaattgaatgttatacagttataaaaagaaataaagtaccaatacgcatatgaaccttgatagcattatgccaactgaaagaa------gccaggcacaaaaggccacctattgtatg-attctatttagatgaaaat----agaataggaagatctacagag-acagaaaccagatttgtggttgcttaggattgagtaggggatgagtgcataggaagttaacagctagggaaggtggggtt-- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108500662 270 - 162613886 ataaaaatattattggataaacaaaatgt--tatatccatgaaattgaatgttatacagctatataaagaaataaagtaccaatacatatatgaaccttgatagcattatgctaactgaaagaa------gccaggcacaaaaggccacatattatatg-attctatttacatg-aaat----tgaataggaaaagctatagag-acagaaaacagatttgtgattgcttaggattgagtaggggatgggcgcataggaggttaacagctaaagaaggtggggtt-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 26854 270 - 126596 ataaaaatgttattggataaacaaaatgt--tatatccatgaaattgagtgttctacagttataaaaagaaataaagtaccaatacgtacatgaaccttgatagcattatgccaactgaaagaa------gccaggcacaaaaggccacctattgtatg-attctatttagatgaaaac----agactaggaaaatctatagag-acagaaaacagatttgtggttgcttaggattgatta-gggatgggtgcataggaggttaacagctagagaaggtggggtt-- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55751369 269 + 99891981 ataaaaatattactggataaacaaaatgt--tatatccatgaaactgaatgttata--gttataaaaagaaataaagtaccaatacatatatgaaccttgatagcattatgctaactgaaagaa------gccaggaacaaaaggccacctattatatg-attctatttacatgaaaat----agaataggaaaatctatagag-acagaaaacagatttgtgattgcttaggattgagtagggaatgggcgtataggaggttaacagctaaagaaggtggggtt-- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133448228 281 - 185818997 ataaaaatattattggataaacaacatgt--tgtatccatgaaattgaatgttatacaattataaaaagaaacaaagtaccaatacatatatgaaccttgatagcattatgctaactgaaggaaggcca-cctaggcacaaaaggccacctattatatg-attctatttacatgaaaatattcagaataggaaaatctatagagaatggaaaacagagttggggttgcttaggattgagtaggggatgggtgcataggagttgaacagttaaagaaggtggggtt-- i rheMac8.chr3 C 0 M 132 s macFas5.chr3 67277864 281 + 192294377 ataaaaatattattggataaacaacatgt--tgtatccatgaaattgaatgttatacaattataaaaagaaacaaagtaccaatacatatatgaaccttgatagcattatgctaactgaaggaaggcca-cctaggcacaaaaggccacctattatatg-attctatttacatgaaaatattcagaataggaaaatctatagagaatggaaaacagagttggggttgcttaggattgagtaggggatgggtgcataggagttgaacagttaaagaaggtggggtt-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2759904 281 + 3123512 ataaaaatgttattggataaacaacatgt--tgtatccatgaaattgaatgttatacaattataaaaagaaacaaagtaccaatacatatatgaaccttgatagcattatgctaactgaaggaaggcca-cctaggcacaaaaggccacctattatatg-attctatttacatgaaaatattcagaataggaaaatctatagagaatggaaaacagagttggggttgcttaggattgagtaggggatgggtgcataggagttgaacagttaaagaaggtggggtt-- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2480169 282 + 10077455 ataaaaatattatcggataaacaacatgt--cgtatccatgaaattgaatgttatacaattataaaaagaaacaaagtaccaatacatatatgaaccttgatagcattatgctaactgaaggaaggccaccctaggcacaaaaggccacctattatatg-agtctatttacatgaaaatattcaggataggaaaatctatagagaatggtaaacagagttggggttgcttaggattgagtaggggatgggtgcataggagtttaacagttaaagaaggtggggtt-- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5688187 281 + 127223203 ataaaaatattattggatgaacaacatat--tgtatccatgaaattgaatgttatacaattataaaaagaaacaaagtaccaatacatatatgaactttgataacattatgctaactgaaggaaggcca-cctaggcacaaaaggccacctattatatg-attctatttacatgaaaatattcagaataggaaaatctatagagaatggaaaacagagttggggttgcttaggattgagcaggggatgggtgcataggagtttaacagtcaaagaaggtggagtt-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1132355 282 - 1799296 ataaaaatattattggataaacaacatgt--tgtatccatgaaattgaatgttatacaattataaaaagaaacaaagtaccaatacatatatgaaccttgatagcattatgctaactgaaggaaggccaccctaggcacaaaaggccacctattatatg-agtctatttacatgaaaatattcagaataggaaaatctatagagaatggaaaacagagttggggttgcttaggattgagtaggggatgggtgcataggagtttaacagttaaagaaggtggagtt-- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1731153 280 + 6934359 at-aaaatcttattggataaacaaaatgt--tgtatccatgaaagtgaatattatacaattataaaaagaaataaagtgccaatacatatatgaaccttgatagcattatgctaactgaaggaaggcca-cctaggcacaaaaggccacctattatatg-attctatttacatgaaaatattcagaataggaaaatctacagagaacggaaaacagatttggggttgcttaggattgggtagggaatgggtgcataggagtttaacagttaaagaaggtggggtt-- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108091132 267 - 128169293 atcgaaatatgattggataaacaaaatgt--tatatccatgaaattgaatattatatagttataaaaag----aaagtaccaatacatatataaacctagataatattatgctaattgaaagaa------gccaggcacaaaaggccacctattatatg-attctatttacatgaaaatattcagaataagaaaatctacagag-acagaaaacagacctgtggttgcttaggattgagtaggtga-gggtgcatggaaggttaacagtttaaca---tgaggtt-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 712126 271 - 18371965 atcaaaatgtgattggataaacaaaatgt--tatatccatgaaattgaatattatatagttataaaaagaaataaagtaccaatacatatatgaaccttgataatattatgctagttgaaagaa------gccaggcacagaaggccacctattatatg-agtctatttacatgaaaatattcagaataagaaaatctatagag-acccaaaacagatctgtggttgcttaggattgagtaggtga-gggtacatggaaggttaacggcttaaca---tgaggct-- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1372177 271 + 3566421 atcaagatatgattggataaacaaaatgt--tatatccatgaaattgaatattatatagttataaaaagaaataaagtaccaacacatatatgaacctttataatattatgctaattgaaagaa------gccaggcacaaaaggccacctattctatg-attctatttacgtgaaaatattcagaataggaaaatctatagag-acagaaaacagattggtggttgcttaggagtgagtaggcga-gggtgcatggaaggttaacagcttaaca---tgaggtt-- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1874832 271 - 9267652 atcgaaatatgattggataaacaaaatgt--tatatccatgaaattgaatattatatagttataaaaggaaataaagtagcaatacatatatgaaccttgataatatttttctaattgaaagaa------gccaggcacaaaaggcaacctattatatg-attctatttccatgaaaatattcagaataggaaaatctatagag-acagaaaacagatttgtgtttgcttaggattgagtaggtga-gggtgcatggaaggttaacagcttaaga---tgaggtt-- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12709068 265 + 14340318 atagagagataagtggataaataaaatgtgctatattcacacgatggaatattattcagccataaaaagaaataaagtactgataca-----ggctgcagaaagaatgactct-------tgaa------gccgcgcacagcaggtcacacactgtgttcattccattcatgtgaacatgcccagaacaggaaaatctatagaa-acagagaagaaatctgtggtttcttagggctgggcaggagctagctgcataggaggttgaaagtcaacgg---taggggttg i otoGar3.GL873564 I 6173 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I a score=1197959.000000 s hg38.chrUn_KI270749v1 47368 139 + 158759 tctttttgaagtgatgaaaatgctctaaaattcattgtgatgatggctccacttatctgtgcatatactaaaagccactgacttgtagacattaatgtgtgcactctacactatgtaaattttatctcaataaatcctt s panTro5.chr1 101873652 139 - 228573443 tcttttggaagtgattaaaatgctctcaaattcattgtgatgatggctccacttatctgtgtatatactaaaagccattgacttgtagacattaatatgtgcactctacagtatgtaaattatatctcaataaatcctt i panTro5.chr1 C 0 C 0 s panPan2.chr7 108500932 139 - 162613886 tctttttgaagtgatgaaaatgctacaaaattcattgtgatgatggctccacttatctgtgcatatactaaaagccattgacttgtacacattaatgtgtgcactctacactatgtaaattatatctcaataagtcctt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 27124 139 - 126596 tctttttgaagtgatgaaaatgctctaaaattcattgtgatgatggctccacttatctgtgcatatactaaaagccactgacttgtagacattaatgtgtgcactctacactatgtaaactatatctcaataaatcctt i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55751638 139 + 99891981 tctttttgaagtgatggaaatgctctaaaattcattgtgatgatggctccacttatctgtgcatatactaaaagccactgacttgtacacattaatgtgtgcactctacactatgtaaattatatctcactaaatcctt i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67278145 139 + 192294377 tctttttgaagtgatgaaaatgctctaaaattcattgtgatgatggcttcacttatctgtgcatatactaaaagccattgacttgcacacattaatgtgtgcactctatgctatgtaaattatatctcaataaaTCCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2760185 139 + 3123512 tctttttgaagtgatgaaaatgctctaaaattcattgtgatgatggcttcacttatctgtgcatatactaaaagccattgacttgtacacattaatgtgtgcactctatgctatgtaaattatatctcaataaatcctt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2480451 139 + 10077455 tctttttgaagtgatgaaaatgctctaaaattcattgtgatgatggcttcacttatctgtgcatatagtaaaagccattgacttgtacacattaatgtgtgcactctatgctatgtaaattatatctcaataaatcctt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5688468 139 + 127223203 tctttttgaagtgatgaaaatgctctaaaattcgttgtgatgatggcttcacttatctgtgcatatactaaaagccattgacttgtacacattaatgtgtgcactctatgctatgtaaattatatctcaataaaTCCTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1132637 139 - 1799296 tctttttgaagtgatgaaaatgctctaaaattcattgtgatgatggcttcacttatctgtgcatatactaaaagccattgacttgtacacattaatgtgtgcactctatgctatgtaaattatatctcaataaatcctt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1731433 139 + 6934359 tctttttgaagtgatgaaaatcctctaaaattcattgtggtgatggctccacttatctgtgcatatactaaaagccattgacttgtacacattaatgtgtgcactctatgctatgtaatttatatctcaataaatcctt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108091399 137 - 128169293 tctttctgacgtgatgaaaatgttctaaaattcattgtgatcatggctgcacttatctgtacatacactaaaaaccgttgacttgtacactctaatgtgtgaactgtgtg--atgtaaataatatcgtaataagtttgt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 712397 137 - 18371965 tctttctgaagtgatgaaaatgttctaaaattcattgtgatcgtggccgcacttatctgtacatacgctaaaaaccattgacttgtacactttaatgtgtgaaccgtgtg--atgtaaataatatcacaataagttcat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1372448 137 + 3566421 tctttctgaagtgatgaaaatgttctaaaattcattgtgatcatggctgcacttatctgtacatacactaaaaaccattgacttgtacactttaatgtgtgtactgtgtg--gtgtaaataatatcacaataagttcgt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1875103 137 - 9267652 tctttctgaagtgatgaaaatgttctaaaattcattgtgatcatggctgcatttatctgtacatacactaaaagccattgacttgtagactttaatgtgtgaactgtgtg--atgtaaataatatcataataagttcgt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12709333 137 + 14340318 tctgtttcaggagatg-aaatgctct-aaatggatgataatgatagctgcagttatatacccatatactaaaagccatcaacttgcctgttttaatgtgtggattggttggtatgtgacttatgtcccaataaGACCTA i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e rheMac8.chr3 133448509 132 - 185818997 M e canFam3.chr18 51742470 1236 - 55844845 I e dasNov3.JH578441 1142924 14881 + 1446996 I a score=409565.000000 s hg38.chrUn_KI270749v1 47507 52 + 158759 tcaaaaaTACACaga--agagtaaggggttt-tggaaagttgcaa-ct-gggaggca s panTro5.chr1 101873791 52 - 228573443 tcaaaaaTACACAGA--AGACCAAGGGGTTT-TGGACTGTTGCAC-CT-GGGAGGCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108501071 52 - 162613886 tcaaaaaCACACaga--agagtaaggggttt-tggagtgttgcag-ct-gggaggca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 27263 52 - 126596 tcaaaaaTACACaga--agagtaaggggttt-tggaatgttgcag-ct-gggaggca i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55751777 52 + 99891981 tcaaaaaTACACaga--agagtaaggggttt-tggagtgttgtag-gt-gggaggca i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67278284 46 + 192294377 TCaaaaatacacaga--agagtaag-------tggagtgttgcag-ct-gggaggca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2760324 46 + 3123512 tcaaaaaTACACAGA--AGAGTAAG-------Tggagtgttgcag-ct-gggaggca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2480590 46 + 10077455 tcaaaaaTATACAGA--AGAGTAAG-------Tggagtgttgcag-ct-gggaggca i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5688607 46 + 127223203 TCaaaaatatacaga--agagtaag-------tggagtgttgcag-ct-gggaggca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1132776 46 - 1799296 tcaaaaaTACACAGA--AGAGTAAG-------Tggagtgttgcag-ct-gggaggca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1731572 46 + 6934359 tcaaaaaTACACAGA--AGAGTAAG-------Tggagtgttgcag-ct-gggaggca i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108091536 51 - 128169293 t-aaaaaTACACagc--agagtaaggagttt-tggagtgttgcac-ct-gggaggca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 712534 51 - 18371965 t-aaaaaTACACagc--agagtaaggagttt-tggagtgttgcag-cc-gggaggca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1372585 51 + 3566421 t-aaaaaTACACagc--agagcaaggagttt-tggagtgttgcag-ct-gggaggca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1875240 51 - 9267652 t-aaaaaCACACagc--agagtaaggagttt-tggagtgttgcag-ct-gcgaggca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12709470 51 + 14340318 T-AGGAGTACACagt--agggcaagaggtt--gggagcagtgcagtca-gggtggca i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1157805 56 + 1446996 TTAAATATGCacaaaacagggtaagtaatttgggaagtgttgcca-ttggggaggca i dasNov3.JH578441 I 14881 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e rheMac8.chr3 133448509 132 - 185818997 M e canFam3.chr18 51742470 1236 - 55844845 I a score=6224891.000000 s hg38.chrUn_KI270749v1 47559 602 + 158759 gtttgaaatactgaa-------------taggcctcatcgagaatgtgaagtttcagtaaagacttgaggaagttgaatgagctgatcaatggatatatggaggg----ctatctttccaagccaagaaattaactagagtcttggtcataaggcagcagcg---tgttggcatgtccagaggacagtgaggtggccaggaccactggtaagatcaagggtgaagatataa---aagaattttggcggttaacatgcggcagatc-atgatg--ggg----ttgcagaccattgtaagaattgttgtttttagtgtacatgaaatggggagacaAATCATTATCCCATTATCAATattttaataaattgg-atccatgaacca-----aatgcaatg---------agattaaatcaattaataataatatgcaaatttgtattaaaattacaagaattatttgcacatttgagaacaggagagtcatga-------ttgtttatcagcaataataaac------attaattttaattgtgatcagctaattg---agattaattgcaatacatcatgctttataatgtgactgtcaaaaggaaagtatgattgtaatcttatactacatCTATCAATGCCTTTGATTCATAAGACTATAGAG s panTro5.chr1 101873843 603 - 228573443 GTTTGAAATACTGAA-------------Taggtctcatcgagaatgtgaggtttcagtaaagacttgaggaagttgaatgagctgatcaatggatatatggaagg----ttatctttcaaagccaagaaattaactagagtcttgatcataagacagcagca---tgttggcatgtacagaggacagtgaggtggccaggaccactggtaagatcaagggtgaagacataa---aagaattttggcggttaacatgccgcagatc-acgatg--ggc----ttgcagaccattgtaagaattgtgtcttttagtgtaaatgaaatggggagacaAATCATTATCCCATTATCAATattttaacaaattgg-atccatgaacca-----aacacgatg---------agattaaatcaattagtaataatatgcaaatttgtattaaaattacaagaattccttgcacatttgagaacaggagagtcatga-------ttttttatcagcaatAATAAAC-----TATTAATTTTAATTGTCATCAACTAATTG---AGATTAATTGCAATACCTCATGCTTTAGAATGTGACTGTCAAAAGGAAAATATGATTGTAATCTTAAATTACATCTATCAATGTCTTTGATTCATAGGACTATAGAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108501123 605 - 162613886 gtttgaaataccgaa-------------taggtctcattgagaatgtgaagcttcagtaaagacttgaggaagttgaatgagctgatcaatggatatatggaggg----ctatctttctaagccaagaaattaactagagtcttggtcataaggcggcagca---tgttggcatgtccagaggacagtgaggtggccagggccactggtaagatcaagggtgaagatataa---aagaattttggtggttaacatggggcagatc-atgatg--ggc----ttgcagaccactgtaagaattgtggcttttagtgtaaatgaaatggggagacaAATCATTATCCCATTATCAATattttaataaattgg-atccatgaacca-----aatccaatg---------agattaaattaattagtaataatatgcaaatttgtatcaaaattacaagaattacttgcacatttgagaacaggagagtgatga-------ttgtttatcagcaataataaac---attattaattttaattgtgatcaactaattg---agattaattgcaatacatcatgctttataatgtgactgtcaaaaggaaaatatcattgtaatcttatactacatCTATCAATGTTTTTGATTCATAAGACTATAGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 27315 603 - 126596 gtttgaaatactgaa-------------taggcctcatcgagaatgggaaatttcagtaaagacttgaggaagttgaatgagctgatcaatggatatatggaggg----ctatctttccaagccaacaaattaactagagtcttggtcataaggcagcagca---ttttggcatg-ccagaggaccgtaaggtggcctggaccactggtaagatcaagggtgaagatataa---aataattttggtggttaacatgcggcagatc-atgatg--ggc----ttgcagaccattgtaagaattgttgtttttagtgtacatgaaatggggagacaaatcattatcccattatcaatattttaataaattgg-atccatgaacca-----aatccaatg---------agattaaatcaattaataataatatgcaaatttgtattaatattacaagaattacttgcacatttcagaacaggagagtcatga-------tt-tttatcagcaataataaac---attattaattttaactgtgatcagctaactg---agattaattgcaatacatcatgctttataatgtgactgtcaaaaggaaaacatgattgtaatcttatactacatCTATCAATGTCTTTGATTCATAAGACTATAGAG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55751829 601 + 99891981 gtttgaaatactgaa-------------taggtctcattgagtatgtgaggtttcagtaaagacttgaggaagttgaataagctgatcaatggatatatggaggg----ctatctttccaagccaagaaattaactagagccttggtcataaggcagcagca---tgttggcatgcccagaggacagtgaggtggccagggccactggtaagatcaagggtgaagatacaa---aagaatttcggtggttaacacggggcagatc-atgatg--ggc----ttgcagaccattgtaagaattgtggcttttagtgtaaatgaaatggggagacaaatcattatcccattatcaatattttaataaattgg-atccatgaacca-----aatccaatg---------agattaaatcaattagtaataatatgcaaatttgaattaaaattacaagaattactagcacatttcagaacaagagaatcatga-------ttgtttatcagcaataataaac------att-attttaattgtgatcagctaattg---tgattaattgcaatacatcatgctttataatgtgactgtcaaaaggaaaatatgattgtaatcttacactacatCTATCAATGTTTTTGATTCATAAGACTATAGAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133448642 605 - 185818997 GTTTGAAATACTGAA-------------Taggtctccttaagaatgtgagatttcagtaaagacttgaggaagttgaatgagctgatcgatggatatatggaggg----ctatctttccagaccaagaaattaacaagagtctgggtcataaggcagcagca---tgttggcatgtccagaggacagtgaagtggccaggaccactggtaagattaagggtgaagatataa---aggaattttggcagttagcatgagtcagatc-atgatg--ggc----ttgcagagtgttgtaagaattgtggcttttagtgtaaatgaaatggggagacaaatcattatcccattatcaatattttaataaattgg-atccatgaacca-----aatccagtg---------agattaaatgaattagtaacaatatacaaatttgtattaaaattacaagaattacttgcacgtttcagaacaggagagtcatga-------ttgtttatcagcaatAATAAAC---ATTATTAATTTTATTTGTGTTCAGCTAATTG---AGATTAATTGCAATACATCATGCTTTATAATGTGACTGTCAAAAAGAAAATATGATTGTAATCTTATATTACATCTGTCAATGTTTTTGATTCATAAGAATATAGAG i rheMac8.chr3 M 132 C 0 s macFas5.chr3 67278330 604 + 192294377 gtttgaaatactgaa-------------taggtctccttaagaatgtgagatttcagtaaagacttgaggaagttgaatgagctgatcgatggatatatggaggg----ctatctttccagaccaagaaattaacaagagtctgggtcataaggcagcagca---tgttggcatgtccagaggacagtgaagtggccaggaccactggtaagattaagggtgaagatataa---aggaattttggcagttagcatgagtcagatc-atgatg--ggc----ttgcagagtgttgtaagaattgtggcttttagtgtaaatgaaatggggagacaAATCATTATCCCATTATCAATATTTTAATAAA-TTG-ATCCATGAACCA-----AATCCAGTG---------AGATTAAATGAATTAGTAACAATATACAAATTTGTATTAAAATTACAAGAATTACTTGCACGTTTCAGAACAGGAGAGTCATGA-------TTGTTTATCAGCAATAATAAAC---ATTATTAATTTTATTTGTGTTCAGCTAATTG---AGATTAATTGCAATACATCATGCTTTATAATGTGACTGTCAAAAAGAAAATATGATTGTAATCTTATATTACATCTGTCAATGTTTTTGATTCATAAGAATATAGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2760370 605 + 3123512 gtttgaaatactgaa-------------taggtctccttaagaatgtgagatttcagtaaagacttgaggaagttgaatgagctgatcgatggatatatggaggg----ctatctttccagaccaagaaattaacaagagtctgggtcataaggcagcagca---tgttggcatgtccagaggacagtgaagtggccaggaccactggtaagattaagggtgaagatataa---aggaattttggcagttagcatgagtcagatc-atgatg--ggc----ttgcagagtgttgtaagaattgtggcttttagtgtaaatgaaatggggagacaaatcattatcccattatcaatattttaataaatttg-atccatgaacca-----aatccagtg---------agattaaatgaattagtaacaatatacaaatttgtattaaaattacaagaattacttgcacgtttcagaacaggagagtcatga-------ttgtttatcagcaATAATAAAC---ATTATTAATTTTATTTGTGTTCAGCTAATTG---AGATTAATTGCAATACATCATGCTTTATAATGTGACTGTCAAAAAGAAAATATGATTGTAATCTTATATTACATCTGTCAATGTTTTTGATTCATAAGAATATAGAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2480636 604 + 10077455 gtttgaaatactgaa-------------taggtct-cttgagaatgtgaaatttcagtaaagacttgaggaagttgaatgagctgatcgatggatatacggaggg----ctgtctttccacaccaagaaattaacaagagtctaggtcataaggcagcagca---tgttggcatgtccaggggacagtgaagtggccaggaccactggtaagattaagggtgaagatataa---aggaattttggcagttagcatgagtcagatc-atgatg--ggc----ttgcagaatgttgtaagaattgtggcttttagtgtaaatgaaatggggagacaaatcattatcccattatcaatattttaataaattgg-atccatgaacca-----aatccagtg---------agattaaatgaattagtaacaatatacaaatttgtattaaaattacaagaattacttgcacatttcagaacaggagagtcatga-------ttgtttatcagcaataataaac---attattaattttatttgagatcagctaattg---agattaattgcaatacatcatgctttataatgtgactgtcaaaaggaaaatatgattgtaatcttatattacatCTGTCAATGTTTTTGATTCATAAGAATATAGAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5688653 604 + 127223203 gtttgaaatactgaa-------------taggtct-cttgagaatgtgaactttcagtaaagacttgaggaagttgaatgagctgatcgatggatatacggaggg----ctgtctttccagaccaagaaattaacaagagtctgggtcataaggcagcagca---tgttggcatgtccagaggacagtgaagtggccaggaccactggtaagattaagggtgaagatataa---aggaattttggcagttagcatgagtcagatc-atgatg--ggc----ttgcagagtgttgtaagaattgtggcttttagtgtaaatgaaatggggagacaAATCATTATCCCATTATCAATATTTTAATAAATTGG-ATCCATGAACCA-----AATCCAGTG---------AGATTAAATGAATTAGTAACAATATACAAATTTGTATTAAAATTACAAGAATTACTTGCACGTTTCAGAACAGGAGAGTCATGA-------TTGTTTATCAGCAATAATAAAC---ATTATTAATTTTATTTGTGTTCAGCTAATTG---AGATTAATTGCAATACATCATGCTTTATAATGTGACTGTCAAAAAGAATATATGATTGTAATCTTATATTACATCTGTCAATGTTTTTGATTCATAAGAATATAGAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1132822 604 - 1799296 gtttgaaatgctgaa-------------taggtct-cttgagaatgtgaaatttcagtaaagacttgaggaagttgaatgagctgatcgatggatatacggaggg----ctgtctttccacaccaagaaattaacaagagtctgggtcataaggcagcagca---tgttggcatgtccagaggacagtgaagtggccaggaccactgataagattaagggtgaagatataa---aggaattttggcagttagcatgagtcagatc-atgatg--ggc----ttgcagaatgttttaagaattgtggcttttagtgtaaatgaaatggggagacaaatcattatcccattatcaatattttaataaattgg-atccatgaacca-----aatccagtg---------agattaaatgaattagtaacaatatacaaatttttattaaaattacaagaattacttgcacatttcagaacaggagagtcatga-------ttgtttatcagcaataataaac---attattaattttatttgtgatcagctaattg---agattaattgcaacacatcatgctttgtaatgtgactgtcaaaaggaaaatatgattgtaatcttatattacatCTGTCAATGTTTTGTATTCATAAGAATATAGAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1731618 601 + 6934359 gtttgaaatattgaa-------------taggtctccttgagaatgtgagatttcagtaaagacttgaggaagttgaatgagctgattgatggatatatggaggg----ctatctttccagaccaacaaattaacaagagtctgggtcataagacagcagca---tgttggcatgtccagaggacagtgaggtggccaggaccactggtaagattaagggtgaagatataa---aagaattttggcagttagcatgagtcagatc-attatg--ggc----ttgcagagtgttataagaattgtggcttttagtgtaaatgaaatggggagacaaatcattatcccattatcaatattttaataaattgg-atccataaacca-----aatccagtg---------agattaaattaattagtaacaatatacaaatctgtattaaaattacaagaattacttgcacgtttcagaacaggagagtcatga-------ttgtttatcagcaatAAT-------ATTATTAATTTTATTTGTGATCAGCTAATTG---AGATTAATTGCAATACATCATGCTTTATAATGTGACTGTCAAAAGGAAAATATGATTGTAATCTTATATTACATCTGTCATTGTTTTTGATTCATAAGAATATAGAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108091587 598 - 128169293 gtttgaaatactgaa-------------taggtctcactgagaatgtgaggtttcagtaaagacttgaggaagttgaatgagctgatcaatggatatatgaaggc----ctatcattccaagccaagaaattaactaaagtctggatcataaggcagcaaga---tgttggcatatccagagaacaatgaggaggccagaaccacaggtaagatcaagggtgaagatat-----aaaagttttggcacttaacatgagacagacc-atg-ag--ggc----ttgcataccattgtaggaatgatggcttttagtgtaaatgaaatgaggagacaAATAATTTTCCTATTATCAATattttagtaaattgg-aacaatgaacta-----aatccaatg---------agattaaattaattagtaataatatacaaatttgtattaaaagtataagaattaattgcgcatttcaggacaagagagtcatga-----------ttatcagcaatgataaac---attattaattttaattgtgatcagctaattg---agattaattgcagtatatcatgctttataatgtgactgtcagaaggaaaatatgattgtaatcttatgctacatcagtCAATGTTTTTGATTCCTAAGAATACAGAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 712585 609 - 18371965 atttgaaatattgaa-------------taggtctcattgagaatttgaggtttcagtaaagacttgaggaagttgaatgagctcatcactgtatatatgatggc----ctatcattccaagccaagaaattaactaaagtctgggtgataaggcagcaggatggtgttggcatatccagagaacaatgaggaggccaggaccaccggtaagatctagggtgaagatataa---aaaagttttggcagttgacatgaggcagatc-atgaag--ggc----ttgcagaccattgtaggaatgacagcttttagtgtaaatcaaattaggagacaAATAATTATCCTATTATCAATATTTTAGTAAATTGGAAAAAAAGAACTA-----AATCCAATG---------AGATTAAATTAATTAGTAATAATATACAAATCTGTATTAAACGTAAAATAATTCATTGCACATTTTAGGACAAGCGAGTCATGA-------TTGTTTATCAGTGATGATAAAC---ATTATTAATTTTAATTGTGATCAGCTAATTG---AGATTAATTGCAATACATCATGCTTTATAACATGGCTGTCAAAAGGAAAATATGATTTTAATCTTATGCTACATCTGTCAATGTTTTTGATTCATAAGAATATAGAG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1372636 605 + 3566421 gtttgaaatattgaa-------------taggcctcattgagaatgcgaggtttcagtaaagacttgaggaagttgagtgagctcatcaatagatatatgaagcc----ctatcattccaagccaagaaattaactaaagtctgggtcataaggcagcaaga---tgttggcatatccagacaacaatgaggaggccaggaccactggtaagatctagagtgaagatataa---aaaagttttggcagttaacatgaggcagacc-atgaag--ggc----ttgcagaccattgtaggaatgatggcttttaatgtaaatgaaattaggagacaAATAATTATCCTATTATCAATatgttagtaaattgg-aacaatgaacta-----aatccaatg---------agattaaattaattagtaataatatacaaatttgtattaaacgtaaaagaattcattgcacattttaggacaagagagtcatga-------ttgtttatcagtgatgataaac---attattaattttaattgtgattagctaattg---agattaattgcaatatatcatgctgtataatgtgactgtcaaagggaaaatatgattgtaatcttatcctacatCTGTCAATGTTTTTGATTCATAAGAATATAGAG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1875291 605 - 9267652 gtttgaaatattgaa-------------taagtctcattgagaatgtgaggtttcagtaaaggcttgaggaagttgaatgagctgatgaatggatatacgaaggc----ctatcattccaagccaagaaattaactaaagtctgggtcataaggcagcaaga---tgttggcatttccagagaacaatgaggaggccaggaccaccagtaagatcaagggtgaagatatga---aagagttttggcagttaacatgaggcagacc-atgaag--ggc----tcgcagaccattgtaggaatgatggcttttagtgtaaatgaaatgaggagacaAATAATTATCCTATTATCAATattttagtaaattag-aacaacgaacta-----aatccaatg---------agattaaattaattagtaataatatccaaatttgcattaaaagtataagaattaattgcacatttaaggacaagagagtcatga-------ttgtttatcagcgatgataaac---attattaattttaattgttatcagctcattg---agattaattgcaatacatcacgctttataatgtgactgtcaaaaggaaaatatgattgtaatcttatgctacatCTGTCAATGTTTTTGATTCATAAGAATATAGAG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12709521 620 + 14340318 gtttgagatgcagaactggtgcgcagagtaggtcttactgagcaggatccattagagtggaggcttgaggaagggaaaggagtgggtccgtgtgcctctggaagagtatctatcattcctgcccaagaaactggctggagaccgaggcctatgtcaagagca---tgttgtcctgttcaaagaacagagtggtggccaggacctgtacaaagg---------------------aggagtttggggatttaacatgggg---------gtag--ggccattttatagatcatcttaagaattttggcttttactgtaaatgaaatgggaagATAAACTGTCATCACTTTGTAAATATTTGAATAAGTTAG-AGCCATGAGCCAACTTGAGTTTAATGGAACTGACCAAAGTAAACTAATCAGAAATAACATACATACACTCATTTACATTACAAAAATCACTTGCAGATTTTAGGACATGAGATGTGTAACTGTTTATTGTTTATCAGCAATGATAAACTGAAGTATTCGTTTTAATTGAGATTAGCTAAttaattagaccaattgcagtatgtcatgcattatgatgtgactgacaaaggaaaag-------gtaatctcaggctacatCTGTCGATGTTTCTAGCACTCAACATTATAGAC i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1157861 587 + 1446996 gtttgaaatcttgaa-taccttacaatgtaggtctcattgagaatgtgatcatggaatgaagatttgaggaaagtgaagaaaccagtgaagttatacatggggga-----gatcatttctggccaaggaattagctagacacc------taaggtgacagca---agctggtagggtcaagaagcagcagggagaccaacactccaaggactatcaaggttg-agacagaaaagaggagctttaggggtttacatggg--aggtcaatgatgaagaa----ttgtagagagacgtaatgatgttgacttttactctaaatgaaatggagaggcaAATCATCATCTCATTATCAAGAGAAGAATaaattgg-aatcatgtgcca-----agtctgatt---------agatggactttattagtgataatatacaacatttgattaa--ttctaaaaagtactggcaaatttcagaaggggagaggcatgg-------caa--taacagcatggataaaa---agtctcagagtc------------ttaattg---ataccaattgcaatgtcttttgcattatgatgtaactgatgaagaaaaataatggt-gtgaatttaagctacatCCAATAACAATTTAGA-ACTTAAGC-------- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51742470 1236 - 55844845 I a score=14709786.000000 s hg38.chrUn_KI270749v1 48161 1298 + 158759 TAAGCCCCTAGTTTTCAAAGCCAACTTATGAGGCAGTGACATCTTATGCAAATTTGCTGCTTTCTGCCACAGTGATCCTTGGTCAGCTGGCACAAATTGTTTTACAAACGCCCCTAGGTCTA---------AAAATAGTTT--GGATCACAATGAACACAGAAACACC----------------------------------------------TTCATCCCTTCAGAAATACCTATCAATTACTTCCAATACAGAATG--AAAAATTGACAAAGGAAATAT----GTGGATTGTAAAAATGCCAG-TTAGCTTGCATCTAGATCAAAGAAAAATGCCATTTTTATTACATTAGATCATTGTTTTGCATGA-GTTTTGGTATAGCACAATGTTGAACCAAGGGCAAAGAGAGATGAATTAATGATATCTTGATTAAGATATCAAGAATTTGAAAGAAAAGGCAGGTCATCTTTGAAGGTTAGTGACATAGCATTCATCTTCTGTTGTCACCTTTTCCATCATGCCCTGTATGCCTGATGGACAGGTTTCACTC--AAGTTCAGAGAACAGCATGC-AACATTAGCTACCAATTAATCTTTATGAAGTGAGCTG-CATTTCCTGCCAGACTGAGCTTATGTTTTAGCAGGAAGCATTT-TTGGGAAATGTTTATG--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTTATACACATGAATT-----AAGATG---------------GGAAGATATTTGGG-------------------GGAATCATTTACTCAAACGCTAAATAATAAAGGTACACAAAGGGCAAATTATACTAGATTTCTTTC----CCACTTGTTTTGTATGTCTCATGCAATTCACCTTGATTCCCTTCAGTTTCTGTTTAATGTAGAAAGTGGCATTTTCCTTATTTTAAGCTTCTAGCACAATGAAAGAATTTCTCTTTTTCATGAACAGGATCATAAATGAAAGGGAGGAAGAGTGTCCTATATCATATTTATTGTTCAACAAAACACTGCTCCATGGCTTAAATTCAGTTTAA-A-AAAGAGAATTTATTGGACATCTA--AC--ACATACATAAAAGATAGTAAAGACAAATGAGAAGAGCGCAGGATATTGAAGTATACAGATTTCAATGCTGAGTTTTATATCTTAGGAAGTTACTCCACCTTACAGAGGCTCAATTTCCCCTGATTTAGGAAGGCGATGCTAATGGGTATTGCATAGGTG-----TAAGTATAAAAATGTTGTATTTAAGAGAATCCCACAAGCTTGGTATAAGGCAGAAAATAAATAGATGTGACATG----AATAAGTAGTTTATTACATTTGTATTCTACCTGCGGACTAGAGGAAGCAAGAAACACAGCCACTATGCTTGATTAGCA s panTro5.chr1 101874446 1295 - 228573443 TAAGCCCCTAGTTTTCAAAGCCAACTGATGAGGCAGCGACATCTTATGCAAGTTTGCTGCTTTCTGCCACAGTGGTCCTTGGTCAGCTGGCACAAATTGTTTTACAAACACCAATAGGTCTA---------AAAAAAGTTT--GGATCACAATGAACACAGAAACACC----------------------------------------------TTCGTCCCTTCAGAAATACCTATCAATTAGTTCCAATACAGAATG--AAAAATTGACAATGGAAGTAT----GTTGATTGTAAAAATGCCAG-ATAGCTTGCATCTACATGAAAGAAAAATGCCATTTTTATTACAATAGATCATTGTTTTACATGA-GTTTTGGTATAGCACAATGTTGAACCAAGGGCAAAGAGAGATGAATTAATGAAGTC----TTAAGATATCAAGAATTTGAAAGAAAAGTCAGGTCATCTTTGAAGGTTAGTGACATAGCATTCATCTTCTGTTGTCACCTTTTCCGTCATTCCCTGTATGCCTGATGGACAGCTTTCACTC--AAGTTCAGAGAACAGCATGCAAAGATTAGCTACCAACTAATTTTTATGAAGTGAGCTT-AATTTCTAGCCAGACTGAGCTTACGTTTTAGCAGGAAGCATTT-TTGGGAAATGTTTATG--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTTATAGACATGAATT-----AAGATG---------------GGAAGATATTTGGG-------------------GGAAACATTTTCTCAAATGCTAAATAACACAGGTACACAAAGGGGAAATTATACTAGATTTATTTC----CCACTTGTTTTCTATGTCTCATCCAATTCTTCTTGATTCCCTCCCGTTTCTGTTTAATGTAGAAAGTGGCATTTTTATTATTTTAAGCTTCTAGCACAATGAAAGAATTTCTCTTTTTCATGAACTGCATCATAAATGAAAGGGAGGAAGAGTGTCCAATATCATATTTATTGTTCAACAAAACACTGCTCCACTGCTTAAATTCAGTTTAA-A-AAAGAGAATTTATTGAACATCTG--AC--ACATACAGAAAAGGCAGTAAAGACAAATGAGAAGAGGGCAGGATATTGAAGTATACAGACTTTAATGCTGAGTTTTGTATCTTAGTAAGTTACTGCACCTTACAGAGACTCAATTTCCCCTGATTTAGGAAGGCGATGCTAATGGATATTGCATAGGTG-----TAAGTATAAAAATGTTGTATTTAAGAGAATCCCACAAGCTTGGTATAAGGCAGAAAATAAATAGATGTGACATT----AATGAGTAGTGTATTACATTTGTATGCTACCTGCAGACTAGAGGAAGCAAGAAACACAGCCACTATGCTTGATTAGCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108501728 1263 - 162613886 TAAGCCCCTAGTTTTCAAAGCCAACTTATGAGGCAGTGACATCTTATGCAAGTTTGCTGCTTTCTGCCACAGTGGTCTTTGGTCAGCTGGCACAAATTGTTTTACAAACACCGCTAGGTCTA---------AAAAAAGTTT--GGATCACAATGAACACAGACCCACC----------------------------------------------TTCTTCCCTTCAGAAATACCTATCAATTACTTCCAATACAGAATG--AAAAATTGACAAAGAAAATAT----GTAGATTGTAAAAATGCCAG-TTAGCTTGCATCTATGTGAAAGAAAAATGCCATTTTTA---------------------------------GTATAGCACAACGTTGAACCAAGGGCAAAGAGAGATGAATTAATTAAGTC----TTAAGATACCAAGAATTTAAAAGAAAAGGAAGGTCATCTTTGAAGGTTAGTGACATAGCATTCATCTTCTGTTGTTGCCTTTTCCGTAATTCCCCTTATGCCTGATGGACAGCTTTCACTC--AGGTTCAGAGAACAGCATGCAAAGATTAGCTACTAATTAATCTTTATGAAGGGAGCTT-AATTTCTAGCCAGACTGAGCTTACGTTTTAGCAGGAAGCATTT-TTAGGAAATGTTTATG--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTCATAGACATGAATT-----AAGATG---------------GGAAGATATTTGGG-------------------GGAAACATTTACTCAAATGCTAAATAATAAAGGTACACAAAGGGCAAATTATATTAGATTTCTTTC----CCACTTGTTTTCTATGTCTCATGCAATTCACCTTGATTCCCTTCAGTTTCTGTTTAATGTAGAAAGTGGCATTTTCATTATTTTAAGCTTCTAGCACAATGAAAGAATTTCTCTTTTTCATGAACTGGATCATAAATGAAAGGTAGGAATAGTGTCCTACATCATATTTATTGTTCAACAAAACACTGCTCCACAGCTTAAATTCAGTTTAA-A-AAAGAGAATTTATTGAACATCTA--AC--ACATACATAAAAGGTAGTAAAGACAAATGAGAAGAGGGCGGGATATTGAAGTATACAGACTTTAATGCTGAGTTCTGTATCTTACTAAGATACTCCACCTTACAGAGGCTCAATTTCCTCTGATTTAGGGAAGCGATGCTAATGGGTATTGCATAGGTG-----TAAGTATAAAAATGTTATATTTAAGATAACCCTACAAGCTTGGTATAAGGCAGAAAATAAATAGATGTAACATT----AATAAATAGTTTATTACATTTGTATGCTACCTGCAGACTAGAGGAAGCAAGAAACACAGCCACTGCGCTTGATTAGCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 27918 1282 - 126596 TAAGCCCCTAGTTTTCAAAGCCAACTTATGAGGCAGTAACATCTTATGCAAGTTTGCTGCTTTCTGCCACAGTGATCCTTGGTCAGCTGGCACAAATTGTTTTACAAACGCCCCTAGGTCT----------AAAATAGTTT---GATCACAATGAACACAGAAACACC----------------------------------------------TTCATCCCTTCAGAAAAACCTATGAATTACTTCCAATACAGAATG--AAAAATTGACAAAGGAAATGT----GTGGGTTGTAAAAATG-CAG-TTAGCTTGCATCTACATGAAAGAAAAATGCCGTTTTTATTACATTAGATCATTGTTTCACATGA-GTTTTGGTATAGCACAATGTTGAACCAAGGGAAAAGAGAGATGAATTAATGAAGTC----TTAAGATATTAAGAATTTGAAAGAAAAGTCAGGTCGTCTTTGAAGGTGAGTGACATAGCATTCATCTTCGGTTGTCACCTTTTCTGTCATTCCCTGTATGCCTGATGGACAGGTTTCACTC--AAGTTCAGAGAAAAGCATGC-AAAATTAGGTACCAATTAATCTTTATGAAGT-AGCTG-CATTTCTAGCCAGACTGACCTTACGTTTTAGCAGGAAGCATTT-TTGGGAAATGTTTATG--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTTATAGACATGAATT-----AAGATG---------------GGAATATATTTGGG-------------------GGTATCATTT-TTCAAACGCTAAATAATAAAGGTACACAAAGGGCAAATTATACTAGATTTCTTT-----CCACTTGTTTTCTATGTCTCATGCAATTCACCTTGATTCCCT-CAGTTTCTGTTTAATGTAGAAAGTGGCATTTTCATTATTTTAC-TTTCTAGCACAATGAAAGAAAT--CTCTTTTCATGAACTGCATCATGAATGAAAGGGAGGAAGAGTGTCCTATATCATATTTATTGTTCAACAAAACACTGCTCCATGGCTTAAATTCAGTTT-T-A-AAAGAGAATTTGTTGAACATCTA--AC--ACATACATAAAAGGCAGTAAAGACAAATGAGGAGAGGGCAGGATATTGAAGTA-ACAGACTTCAATGCTGAGTTTTATATCTTAGGAAGTTACTCCACCTTACAGAGGCTCAATTTCCCCTGATTTAGGAAGGCGATGCTAATGGGTATTGCATAGGTG-----TAAGTATAAAAATGTTGTATTTAAGAGAATCCCACAAGCTTGGTATAAGGCAGAAAATAAATAGATGTGACATG----AATAAGTAGTTTATTACATTTGTATGCTACCTGCGGACTAGAGGAAGCAAGAAACACAGCCACTATGCTTGATTAGCA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55752430 1293 + 99891981 TAAGCCCCTAGTTTTCAAAGCCAACTTATGAGGCAGTGACACCTTATGCAAGTTTGCTGCTTTCTGCCACAGTGGTCCTTGGTCAGCTGGCACAAATTGTTTTACAAACACCACTAGGTCTA---------ACAAAAGTTT--GGATCACAGTGAACACAGACACACT----------------------------------------------TTCTTCCCTTCAGAAATACCTATCAATTACTTCCAATACAGAATG--AAAAATTGATAAAGAAACTAT----GTTGATTGTAAAAATGCCAGTTTAGCTTGCATCTACGTGAAAGAAAAATGCCATTTTTGTTACCTTAGATCATTGTTTTACATGA-GTTTTGGTATAGCACAACGTTGAACCAAGGGCAAAGAGAGATGAATTAATTAAGTC----TTAATATATCAAGAATTTAAAAGAAAAGGAAGGTCATATTTGAAGGTTAGTGACATAGCATTCATCTTCTGTTGTCACCTTTTCCGTCATTCCCTGTATGCCTGATGGACAGCTTTCACTC--AGGTTCAGAGAAGAGCATGCAAAGATTAGCTACCAATTAATCTTTATGAAGGGAACTT-AATTTCTAGACAGACTGAGCTTATGTTTTAGCAGAAAGTATTT-TTAGGAAATGTTTATG--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTATTTTATAGACATGAATT-----AAGATG---------------GGAAGATATTT-GG-------------------GGAAACATTTACTCAAACACTAAATAATAAAGGTATACAAAGGGCAAATTGTATTAGATTTCTTTC----CCACTTGTTTTCTATGTCTCTTGCAATTCACCTTGATTCCTTTCAGTTTCTGTTTAATGTAGAAAGTAGTATTTTCATTATTTTAAGCTTCTAACACAATGAAAGAATTTCTCTTTTTCATGAACTGGATCATAAATGAAAGGTAGGAAGAGTGTCCTATATCATATTTATTGTTAAACAAAACACTGCTCCACGGCTTAAATTCAGTTTAA-A-AAAGAGAATTTATTGAACATCTA--AC--ACATACATAAAAGGCAGTAAAGACAAATGGAAAGAGGGCAGGATATTGAAGTATACAGACTTTAATGCTGAGTTCTGTATCTTACTAAGATACTCCACCTTACAGAGGCTCAATTTCCTCTGATTTAGGAAGGCAATGCTAATGGGTATTGCATAGGTG-----TAAGTATAAAAATGTTATATTTAAGATAACCCCACAAGCTTGGTATAAGGCAGAAAATAAATAGATGTAACATT----AATAAATAGTTTATTACGTTTGTATGCTACCTGCAGACTAGAGGAAGCAAGAA--ACAGCCACTGTGCTTGATTAGCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133449247 1274 - 185818997 TAAGCCCCTAGTTTTCGAAGCCAGCTTGTGAGGCAGTGACATCTTATGCAAGTTTGCTGCTTTCTGGCACAGTGGTCCTTG-------GTCACAAATTGTTTTAAAAACACCACTAGGTCTA--------AAAAAAAGTTT--GGATCACAATGAACACAGACACACC----------------------------------------------CTCATCCTTTCAGAAATACCTATCAATTACTTCCAATACAGAATG---AAAACTGACAAAGGAAATAT----GTTGATTGTAAAAATGTCAG-TTAGCTTGCATCTACATGAAAG-AAAATGCCATTTTTATTACATTAGATCATTGTTTTACATGA-GTTTTGGTATAGAACAACGTTGAACCAAGGGTAAAGACAGATGAATTAATTAAGTC----TTACGATATCAAGAATTTAAAAGAAAAGGAAGGTCATCTTTGAAGTTTAGTGACATAGCATTCATCTTCTGTTGTCACCTTTCCCGTCATTCCCTGTATGCCTGATGGACAGCTTTCACTC--AAGTTCAGAGAACAGCTTGCAAAGATTAGCTACCAATTAATCTTTATGAAGGGAACTT-AATTTCTAGCCAGACTGAGCTTACATTTTAGCAGGAAGCATTT-TTAGGAAATGTTTATG--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTTATAGACATGAATT-----AAGATG---------------GGAAGATATGTGGG-------------------GGAAATATTTACTCAAACGCTAAATAATAAAGGTACACAAAGGGCAAGTTATATTAGATTTCTTTC----CCATTTGTTTTCTGTATCTCGTGCAATTCACCTTGATTCCCTTCAGTTTCTGTTTAATGGAGAAAGTGGTATTTTCATTATTTTAAGCTTCTAGGACAATGAAAGAATTTCTCTTTTTCATGAACTGAATCATAAATGAAAGGTAGGAAGAGTGTCCTATATCATATTTATTGTTCAACAAAACACTGCTCCACGGCTTAAATTCAGTTTGA-A-AAGGAGAATTTATTGAACGTCTA--AC--ACATACATAAAAGGCAGTAAAGACAAATGAAAAGAGGGCAGGATATTGAAGTATACAGACTTTAATGCTGAGTTCTGTA----AGTTACTCACTCCACCTTACAGAGGCTCAATTCCCTCTGATTTAGGAAGGCGATGCTAATGGGTATTGCATAGCTG-----TAAGTATAAAAATGTTATATTTAAGATAACCCCACAAGCTTCATATAAGG-----AATAAATAGATGTAACGTT--------AATAGTTTATTACATTTCTATGCTACCTGCAGACTAGAGGAAGCAAGAAACATAGCCACTCTGCTTGATTAGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67278934 1274 + 192294377 TAAGCCCCTAGTTTTCGAAGCCAGCTTGTGAGGCAGTGACATCTTATGCAAGTTTGCTGCTTTCTGGCACAGTGGTCCTTG-------GTCACAAATTGTTTTAAAAACACCACTAGGTCTA--------AAAAAAAGTTT--GGATCACAATGAACACAGACACACC----------------------------------------------CTCATCCTTTCAGAAATACCTATCAATTACTTCCAATACAGaatg---aaaactgacaaaggaaatat----gttgattgtaaaaatgTCAG-TTAGCTTGCATCTACATGAAAG-AAAATGCCATTTTTATTACATTAGATCATTGTTTTACATGA-GTTTTGGTATAGAACAACGTTGAACCAAGGGTAAAGACAGATGAATTAATTAAGTC----TTACGATATCAAGAATTTAAAAGAAAAGGAAGGTCATCTTTGAAGTTTAGTGACATAGCATTCATCTTCTGTTGTCACCTTTTCCGTCATTCCCTGTATGCCTGATGGACAGCTTTCACTC--AAGTTCAGAGAACAGCTTGCAAAGATTAGCTACCAATTAATCTTTATGAAGGGAACTT-AATTTCTAGCCAGACTGAGCTTACGTTTTAGCAGGAAGCATTT-TTAGGAAATGTTTATG--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTTATAGACATGAATT-----AAGATG---------------GGAAGATATGTGGG-------------------GGAAATATTTACTCAAACGCTAAATAATAAAGGTACACAAAGGGCAAATTATATTAGATTTCTTTC----CCATTTGTTTTCTGTATCTCGTGCAATTCACCTTGATTCCCTTCAGTTTCTGTTTAATGGAGAAAGTGGTATTTTCATTATTTTAAGCTTCTAGGACAATGAAAGAATTTCTCTTTTTCATGAACTGAATCATAAATGAAAGGTAGGAAGAGTGTCCTATATCATATTTATTGTTCAACAAAACACTGCTCCACGGCTTAAATTCAGTTTGA-A-AAGGAGAATTTATTGAACGTCTA--AC--ACATACATAAAAGGCAGTAAAGACAAATGAAAAGAGGGCAGGATATTGAAGTATACAGACTTTAATGCTGAGTTCTGTA----AGTTACTCACTCCACCTTACAGAGGCTCAATTCCCTCTGATTTAGGAAGGCGATGCTAATGGGTATTGCATAGCTG-----TAAGTATAAAAATGTTATATTTAAGATAACCCCACAAGCTTCATATAAGG-----AATAAATAGATGTAACGTT--------AATAGTTTATTACATTTCTATGCTACCTGCAGACTAGAGGAAGCAAGAAACATAGCCACTCTGCTTGATTAGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2760975 1278 + 3123512 TAAGCCCCTAGTTTTCGAAGCCAGCTTGTGAGGCAGTGACATCTTATGCAAGTTTGCTGCTTTCTGGCACAGTGGTCCTTG-------GTCACAAATTGTTTTAAAAACACCACTAGGTCTA--------AAAAAAAGTTT--GGATCACAATGAACACAGACACACC----------------------------------------------CTCATCCTTTCAGAAACACCTATCAATTACTTCCAATACAGaatg---aaaactgacaaaggaaatat----gttgattgtaaaaatgTCAG-TTAGCTTGCATCTACATGAAAG-AAAATGCCATTTTTATTACATTAGATCATTGTTTTACATGA-GTTTTGGTATAGAACAACGTTGAACCAAGGGTAAAGACAGATGAATTAATTAAGTC----TTACGATATCAAGAATTTAAAAGAAAAGGAAGGTCATCTTTGAAGTTTAGTGACATAGCATTCATCTTCTGTTGTCACCTTTTCCGTCATTCCCTGTATGCCTGATGGACAGCTTTCACTC--AAGTTCAGAGAACAGCTTGCAAAGATTAGCTACCAATTAATCTTTATGAAGGGAACTT-AATTTCTAGCCAGACTGAGCTTACATTTTAGCAGGAAGCATTT-TTAGGAAATGTTTATG--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTTATAGACATGAATT-----AAGATG---------------GGAAGATATGTGGG-------------------GGAAATATTTACTCAAACGCTAAATAATAAAGGTACACAAAGGGCAAATTATATTAGATTTCTTTC----CCATTTGTTTTCTGTATCTCGTGCAATTCACCTTGATTCCCTTCAGTTTCTGTTTAATGGAGAAAGTGGTATTTTCATTATTTTAAGCTTCTAGGACAATGAAAGAATTTCTCTTTTTCATGAACTGAATCATAAATGAAAGGTAGGAAGAGTGTCCTATATCATATTTATTGTTCAACAAAACACTGCTCCACGGCTTAAATTCAATTTGA-A-AAGGAGAATTTATTGAACGTCTA--AC--ACATACATAAAAGGCAGTAAAGACAAATGAAAAGAGGGCAGGATATTGAAGTATACAGACTTTAATGCTGAGTTCTGTA----AGTTACTCACTCCACCTTACAGAGGCTCAATTCCCTCTGATTTAGGAAGGCGATGCTAATGGGTATTGCATAGCTG-----TAAGTATAAAAATGTTATATTTAAGATAACCCCACAAGCTTCATATAAGG-----AATAAATAGATGTAACGTT----AATAAATAGTTTATTACATTTCTATGCTACCTGCAGACTAGAGGAAGCAAGAAACATAGCCACTCTGCTTGATTAGCA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2481240 1289 + 10077455 TAAGCCCCTAGTTTTCAAAGCCAGCTTGTGAGGCAGTGACATCTTATGCAAGTTTGCTGCTTTCTGGCACAGTGGTCCTGG-TCAGCTGGCACAAATTGTTTTAAAAACACCACTAGGTCTA--------CAAAAAAGTTT--GGATCACAATGAGCACAGACACACC----------------------------------------------CTCATCCTTTCAGAAATATCTATCAATTACTTCCAATACAGaatg---aaaactgacaaaggaaatat----gttgattgtaaaaatgTCAG-TTAGCTTGCATCTACATGAAAG-AAAATGCCATTTTTATTACATTAGATCATTGTTTTACATGA-GTTTCGGTATAGAACAACGTTGAACCAAGGGTAAAGACAGATGAATTAATTAAGTC----TTATGATACCAAAAATTTAAAAGAAAAGGAAGGTCATCTTTAAAGTTTAGTGACATAGCATTCATCTTCTGTTGTCACCTTTTCCGTCATTCCCTGTATGCCTGATGGACAGCTTTCACTC--AAGTTCAGAGAACAGCTTGCAAAGATTAGCTACCAATTAATCTTTATGAAGGGAACTT-AATTTCTAGCCAGACTGAGCTTACGTTTTAGCAGGAAGCATTT-TTAGGAAATGTTTATG--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTTATAGACATGAATT-----AAGATG---------------GGAAGATATTTGGG-------------------GGAAATATTTACTCAAACGCTAAATAATAAAGGTACACAAAGGGCAAATTATATTAGATTTCTTTC----CCATTTGTTTTCTGTATCTCGTGCAATTGACCTTGATTCCCTTCAGTTTCTGTTTAATGGAGAAAGTGGTATTTTCATTATTTTAAGCTTCTAGGACAATGAAAGAATTTCTCTTTTTCATGAACTGAATCATAAATGAAAGGTAGGAAGAGTGTCCTATATCATATTTATTGTTCAACAAAACACTGCTCCACGGCTTAAATTCAGTTTGA-A-AAAGAGAATTTATTGAACGTCTA--AC--ATATACATAAAAGGCAGTAAAGACAAATGAAAAGAGGGCAGGATATTGAAGTATACAGACTTTAATGCTGAGTTCTGTA----AGTAAGTTACTCCACCTTACAGAGGCTCAATTCCCTCTGATTTAGGAAGGCGATGCTAATGGGTATTGCATAGCTG-----TAAGTATAAAAATGTTATATTTAAGATAACCCCACAAGCTTCATATAAGGAAGAAAATAAATAGATGTAATGTT----AATAAATAGTTTATTACATTTCTATGCTACCTGCAGACTAGAGGAAGCAAGAAACATAGCCACTCTGCTTGATTAGCA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5689257 1336 + 127223203 TAAGCCCTTAGTTTTCAAAGCCAGCTTGTGAGGCAGTGACATCTTACGCAAGTTTGCTGCTTTCTGGCACAGTGGTCCTTGGTCAGCTGGCACAAATTGTTTTAAAAACACCACTAGGTCGA--------AAAAAAAGTTT--GGATCACAATGAACACAGACACACCCTCATCCTTTCAGAAATACCTATCTCATCCTTTCATAAATACCTATCTCATCCTTTCAGAAATACCTATCAATTACTTCCAATACAGAATG---AAAACTGACAAAGGAAATAC----GTTGATTGTAAAAATGTCAG-TTAGCTTGCATCTACACGAAAG-AAAATGCTATTTTTATTACATTAGATCATTGTTTTACATGA-GTTTTGGTATAGAACAACGTTGAACCAAGGGTAAAGACAGATGAATTAATTAAGTC----TTACGATATCAAGAATTTAAAAGAAAAGGAAGGTCATCTTTAAAGTTTAGTGACATAGCATTCATCTTCTGTTGTCACCTTTTCCATCATTCCCTGTATGCCTGATGGACAGCTTTCACTC--AAGTTCAGAGAACAGCTTGCAAAGATTAGCTACCAATTAATCTTTATGAATGGAACTT-AATTTCTAACCAGACTGAGCTTACATTTTAGCAGGAAGCATTT-TTAGGAAATGTTTATG--TTACAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTTATAGACATGAATT-----AAGATG---------------GGAAGATATTTGGG-------------------GGAAATATTTACTCAAACGCTAAATAATAAAGGTACACAAAGGGCAAATTATATTAGATTTCTTTC----CCATTTGTTTTCTGTATCTCGTGCAATTCACCTTGATTCCCTTCAGTTTCTGTTTAATGGAGAAAGTGGTATTTTCATTATTTTAAGCTTCTAGGACAATGAAAGAATTTCTCTTTTTCATGAACTGAATCATAAATGAAAGGTAGGAAGAGTGTCCTATATCATATTTATTGTTCAACAAAACACTGCTCCACGGCTTAAATTCAGTTTGA-A-AAAGAGAATTTATTGAAAGTCTA--AC--ACATACATAAAAGGCAGTAAAGACAAATGAAAAGAGGGCAGGATATTGAAGTATACAGACTTTAATGCTGAGTTCTGTA----AGTAAGTTACTCCACCTTACAGAGACTCAATTCCCTCTGATTTAGGAAGGCGATGCTAATGGGTATTGCATAGCTG-----TAAGTATAAAAATGTTATATTTAAGATAACCCCACAAGCTTCATATAAGGGAGAAAATAAATAGATGTAACGTT----AATAAATAGTTTATTACATTTCTATGCTACCTGCAGACTAGAGGAAGCAAGAAACATAGCCACTCTGCTTGATTAGCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1133426 1286 - 1799296 TAAGCCCCTAGTTTTTGAAGCCAGCTTGTGAGGCAGTGACATCTTATGCAAGTTTGCTGCTTTCTGGCACAGTGGTCCTTGGTCAGCTGGCACAAATTGTTTTAAAAACACCACTAGGTCTA--------AAAAAAAGTTT--GGATCACAATGAGCACAGACACACC----------------------------------------------CTCATCCTTTCAGAAATACCTATCAATTACTTCCAATACAGAATG---AAAACTGACAAAGAAAATAT----GTTGATTGTAAAAATGTCAG-TTAGCTTGCATCTACATGAAAG-AAAATGCCATTTTTATTACATTAGATCATTGTTTTACATGA-GTTTTGGTATAGAACAACGTTGGACCAAGGGTAAAGACAGATGAATTAATTAAGTC----TTATGATACCAAAAATTTAAAAGAAAAGGAAGGTCATCTTTAAAGTTTAGTGACATAGCATTCATCTTCTGTTGTCACCTTTTCCGTCATTCCCTGTATGCCTGATGGACAGCTTTCACTC--AAGTTCAGAGAACAGCTTGCAAAGATTAGCTACCAATTAATCTTTATGAAGGGAACTT-AATTTCTAGCCAGACTGAGCTTACGTTTTAGCAGGAAGCATTT-TTAGGAAATGTTTATG--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTCATAGACATGAATT-----AAGATG---------------GGAAGATATTTGGG-------------------GGAAATATTTACTCAAACGCTAAATAATAAAGGTACACAAAGGGCAAATTATATTAGATTTCTTTC----CCATTTGTTTTCTGTATCTCGTGCAATTCACCTTGATTCCCTTCAGTTTCTGTTTAATGGAGAAAGTGGTATTTTCATTATTTTAAGCTTCTAGGACAATGAAAGAATTTCTCTTTTTCATGAACTGAATCATAAATGAAAGGTAGGAAGAGTGTCCTATATCATATTTATTGTTCAACAAAACACTGCTCCACGGCTTAAATTCAGTTTGA-A-AAAGAGAATTTATTGAACGTCTA--AC--ACATACATAAAAGGCAGTAAAGACAAATGAAAAGAGGGCAGGATATTGAAGTATACAGACTTTAATGCTGAGTTCTGTA----AGTAAGTTACTCCACCTTACAGAGGCTCAATTCCCTCTGATTTAGGAAGGCGATGCTAATGGGTATTGCATAGCTG-----TATGTATAAAGATGTTATATTTAAGATAACCCCACAAGCTTCATATAAGGAAGAAAATAAATAGATGTAACGTT--------AATAGTTTATTACATTTCTATGCTACCTGCAGACTAGAGGAAGCAAGAAACATAGCCACTCTGCTTGATTAGCA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1732219 1294 + 6934359 TAAGCCCCTAGTTTTCAAAGCCAGCTTGAGAGGTAGTGACATCTCATGCAAGTTTGCTGCTTTCTGGCACAGTGGTCCTTGGTCAGCTGGCACAAATTGTTTTAAAAACACCACTAGTTCTA--------AAAAAAAGTTT--GGATCACAATGAACACAGACACATC----------------------------------------------TTCAACCTTTCAGAAATACCTATCAATTACTTCCAATACAGAATG---AAAATTGACAAAGGAAATAT----GCTGATTGTAAAAATGTCAG-TTAGCTTGCATCTACATGAAAG-AAAAGGCCATTTTTATTACATTAGATCATTGTTTTACATGA-GTTTTGATATAGAACAACGTTGAACCAAGGGTAAAGACAGATGAATTAATTAAGTC----TTATGATATCAAGAATTTAAAAGAAAAGGAAGGTCATCTTTGAAGTTTAGTGACATAGCATTCATCTTCTGTTGTCACCTTTTCCGTCATTCCCTGTATGCCTGATGGAGAGCTTTCACTC--AAGTTCAGAGAACAGCTTGCAAAGATTAGCTACCAATTAATCTTTATGAAGGGAACTT-AATTTCTAGCCAGACTGAGCTTACGCTTTAGCAGGAAGCATTT-TTAGGAAATGTTTATG--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTCATAGACATGAATT-----AAGATG---------------GGAAGATATTTGGG-------------------GGAAATATTTACTCAGATGCTAAATAAGAAAGGTACACAAAGGGCAAATTATATTAGATTTCTTTC----CCACTTGTTTTCTGTATCTTGTGCAATTCACCTTGATTCCCTTCACTTTCTGTTTAATGGATAAAGTGGCATTTTCATTATTTTAAGCTTCTAGGACAATGAAAGAATTTCTCTTTTTCATGAACTGAATCATAAATGAAAGGTAGGAAGAGTGTCCTATATCATATTTATTGTTCAACGAAACACTGCTCCACGGCTTAAATTCAGTTTGA-A-AAAGAGAATTTATTGAACGTCTA--AC--ACATACATAAAAGGCAGTAAAGACAAATGAAAAGAGGGCAGGATATGGAAGTATACAGACTTTAATGCTGagttctgtatcttagtaagttactccaccttacagaggctcaatttcctctgatttaggaaggtgatgctaatgggtattgcataggtg-----taagtataaaaATATTATATTGAAGATAACTCCACAAGCTTGGTATAAGGAAGAAAATAAATAGATGTAACGTT----AATAAATAGTTTATTACATTTCTATGCTACCTGCAGACTAGAGGAAGCAAGAAACACAGCCACTCTGCTTGATTAGCA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108092185 1280 - 128169293 TAGACCTCTAGTTTTCAAAGCCATCTTATGAGACAGTGACATCTCATGCAAGTT-GCTGCTTTCTGGCACAGTGGTCCTTGGTCAGCTGGCACAAATTATTTTAAAAACATCACTAGGTCCA-----------AAAATTTT--GGATCACAATGGATGCAGATACACC----------------------------------------------TACATCCCTTTATAAATACCTATCAATTACATCCAATACAACATG--AAAAACTGACAAAAGAACGAT----GTTGATTGTAATAATGCCAG-TTAGCTTGCATCT-----------AAATGCCATTTTTATTATAGTAGATAATTATTTTACATGA-GTTTTGGTATAGCATAACTTTGAACCAAGGGCAGAGAGAGATGAAATAATTAAGTC----TTAACATATCAGGAATTGAAAAGTAAAGGGAGGTCATCTCTGAAGGTTAGTGACATAGCATTCATCTTCTTTTGTCATCTTTTCCATCATTCCCTGTATGCCTTATGGACAGCTCTCACTC--AAGTTCAGAGAATAGCATGCAAAGATTAGCTACCAATTAATCTTTATGAAGGGAACTT-AATTTCTAGCATGACTCAGCTTTCGTTTCTGCAGGAAGCATTT-TTAGGAAAAATTTATT--GTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCTACTTTATAGACATGAATT-----AAGATG---------------GGAAGATATTTGTG-------------------GGAAATATTTACTCAAAAGCTAAATAATAAAGGTACACAAAGGGCAAATTATATTCGACTTCTTTC----CCACTCGTTTTCTATAGCTCAGGCAATTCACCTTGATTCCCTTCAGTTTCCGTTTAATGTAGAAAGTGGCATTTTCATTATTTTAAGCTTCTAGCACAATAAAAGAATTTCTTTGTTTTATGAACTGGATCATAAATGAAAGGTTGGAAGAGTTTCCTATATCATATTTATTGTTCAACAAAACACCACTCCATGGCTTAAATTCATTTTTA-A-AAAAAGAATGTATTGAACATTAA--AC--ACACACATGAAAGGCAGTAAAGACAAATGAAAAGAGGGCAGGATATTGAAGTATACAGACTTTAGTGTGGAGTTCTGTATCACAGTCAGTTACTCCACCTTACAGAGGCTGGATTTCCTCTGATTCAGGAAGGCGATGCTAA-GGGGACTGCAAAGGTA-----TAAGTATAAAAATGTTATAGTTAAGATAACCCTGCAAGCTCTGTACAAGGCAGAAAATAAATAGATGTAACATT----AATAAATAGTTTATTACATTTGTTCGCTACCTGCAAACTAGAGGAAGCAAGAAATACAGCCACTCCGCTTGATTAGCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 713194 1291 - 18371965 TAGACCTCTAGTTTTCAAGGCCAGCTTAGGAGACAGTGACATCTCATGCAAGCTGGCTGCTTTCTGGCCCAGTGGTCCTTGGTCAGCTGGCACAAA-TATTTTAAAAACATCACTAGGTCCA-----------AAAGTTTT--GGATCACAGTGGACACAGATACACC----------------------------------------------TACATCCCTTTAGAAATACCTATCAATTACATCCAATACAACATA--AAAAACTGACAAAGGAACTAC----GTGGATTATAACAACGCCAG-TTGGCTTGCATCTACATGAAAGAAAAATGCCGTTTTTATTACAGTAGATAATTATTTTACATGA-GTTTTGGTATAGCATAACTTTGAACCAACGGCAGAGAGAGATGAAATAATTAAGTC----TTAAGATATGAGGAATTGAAAAGTAAACGAAGGTTGTCTCTGAAGGTTAGTGACATAGCATTGATCTTCTTTTGTCATCTTTTCCATCATTCCCTGTATGCCTGATGGACAGCTTTCACTC--AAGTTCAGAGAACAGCATGCAAAGATTAGCTACCAATTAATCTTTATGAAGGGAACTT-AATTTCTAGCATGACTCAGCTTACGTTTCTGCAGGAAGCATTT-TTAGGAAAAGTTTATC--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AACGTCTACTTTATAGACATGAATT-----AAGATG---------------GGAAGATATTTGGG-------------------GGAAATATTTACTCAAAAGGTAAATAATAAAGGTACACAAAGGGCAAATTATATTCGATTTCTTTA----CCACTTGTTTTCTACAGCTCAGGCAATTCACCTTGATTCCCTTCAGTTTCTGTTTAATGTAGAAAGTGGCATTTTCATTATTTTAAGCTTCTAGCACAATAAAAGAATTTCTTTTTTTCATGAACTGGATCATAAATGAAAGGTAGGAAGAGTTTCCTATATCATATTTATTGTTCAACAAAACACCACTCCGTGGCTAAAATTCATTTTAA-A-AAAGAGAATTTATTGAACAGCTA--AC--ACCCACATAAAAGGCAGTAAAGACAAATGAAAAGAGGGCAGGATATTGACGTTTACAGACTTTAATGTGGAGTTCTGTATCATAGTAAGCTACTCCACCTTACAGAGGCTGGATTTCCTCTGATTTAGGAAGTCGATGCTAA-GGGGATTGCAAAGGTA-----TAAGTGTAAAAATGTTATATTTAAGATAACCCTGCGAGCTTTGCACAAGGCAGAAAATAAATAGATGTAACATT----AATAAATAGTTTATTACCTTTGTTTGCTACCTACAAACTAGAGGAAGCAAGAAACACAGCCAGTCTGCTTGATTAGCA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1373241 1295 + 3566421 CAGACCTCTAGTTTTCAAAGCCAGCTTATGAGACAGTGACATCTCATGCAAGTTTGCTGCTTTCTGGCACAGTGGTCCCTGGTCAGATGGCACAAATTATTTTAAAAACATCACTAGGTCCA-----------AAAATCTT--GGATCACAATGGACACAGATACACC----------------------------------------------TACATCCCTTTAGAAATACCTATCAATTACATCCAATACAACATG--CAAAACTGACGAAGGAACTACGTATGTTGATTGTTACAATGCCAG-TTAGCTTGCATCTACATGAAAGAAAATTGCCATTTTTATTACAGTAGATAATTATTTTACATGA-GTTTTGGTATAGCATAACTTTGAACCAACAGCAGAGGGAGATGAAATAATTAAGTC----TTAAGATATCAGGGATTGAAAAGTAAGGGAAGGTCATCTCTGAAGGTTAGTGACACAGCATTCATCTTCTTTTGTCATCTTTTCCATCATTCCCTGTATGCCTTATGGACAGCTTTCACTC--AAGTTCAGAGAACAGCATGCAAAGATTAGCCACCAATTAATCTTTATGAAGGGAACTT-AATTTCTAGCATGACTCAGCTTACGTTTCTGCAGGAAGCATTT-TTAGGAAAAGTTTATC--TTAGAGTTTGCCCTTCTTGACAAGGTGAGACATA-------AATGTCCACTTTATAGACATGAATT-----AAGATG---------------GGAAGATATTTGGG-------------------GGAAATATTTACTCAAAAGCTAAATAATAAAGGTACACAAAGGGCAAATTATATTCGATTTCTTTC----CCACTTGTTTTCTATAGCTCAGGCAATTCACCTTGATTCCCTTCCGTTTCTGTTTAATGCAGAAAGTGGCATTTTCATTATTTTAAGCTTCTAGCACAATGAAAGAATTTCTTTTTTTCATGAACTGGATCATAAATGAAAGGTAGGAAGAGTTTCCTATATCATATTTATTGTTCAACAAAACACTGCTCCGTGGCTTAAACTCATTTTAA-A-AAAGAGAATTTATTGAACATCGA--AC--ACACACATAAAAGGCAGTAAGGACAAATGAAAAGAGGGCAGGATATTGAAGTACACAGACTTTGATGTGAAGTTCTGTATCATAATAAGCTACTCCACCTTACAGAGGCTGGATTTCCTCTGATTTAGGAAGGCGAGGCTAA-GGGGATTGCAAAGGTA-----TAAGTATAAAAATGTTATATTTAAGATAACCCTGCAAGGTTTGTACAAGGCAGAGAATAAATAGATGTAACATT----AATAAATAGTTTATTACATTTGTTCGCTACCTGCAAA-TAGAGGAAGCAAGAAACCCAGCCACTGTGCTTGATTAGCA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1875896 1294 - 9267652 TAGACCTCTAGTTTTCAAAGCCAGCTTATGAGACAGTGACATCTCATGCAAGTTTGCTGCTTTCTGGCACAGTGGTCCTTAGTCAGCTGGCACAAATTATTTTAAAAACATCACTAGGTCCA-----------AAAATTTT--GGACCGCAGTGGACACAGATACACC----------------------------------------------TACCTCCCTTTAGAAATACCTATCAAGTACATCGAATACAACATG--AAAAACTGACAAAGGAACTAT----GTTGATTGTAACAATGCCAG-TTAGCTTGCATCTACATGAAAGAAAAACGCCATTCTAATTACAGTAGATAATTATTTTACGTGA-GTTTTTGTGTAGCATAACTTTGAACCAAGGGCAGAGAGAGATGAAATAATTAAGTC----TTAAGATATCAGGAATTGAAAAGTAAAGGAAGGTCATCTCTGAAGGCTAGTGACATAGCATTCATCTTCTTTTGTCATCTTTTCCATCATTTCCTGTATGCCTTATGGACAGCTTTCACTC--AAGTTCAGAGAACAGCATGTAAAGAGTAGCTACCAATTAATCTTTATGAAGGGAACTT-AATTTCTAGCCTGACTCAGCTTACGTTTCTGCAGGAAGCGTTT-TTAGGAAAAGTTTATC--TTAGAGTTTGCCCTTCTTGACAAGGTGAGATATA-------AATATCTACTTTATAGACATGAATT-----AAGATA---------------GGAAGATATTTGGG-------------------GGAAATATTTACTCAAAAGCTAAATAATAAAGGTACACAAAGGGCAAATTATATTCGATTTCTTTC----CCACTTGTTTTCTACAGCTCAGGCAATTCACCTTGGTTCCCTTCAGTTTCTGCTTAATGTAGAAAGTGGCATTTTCATTATTTTAAGCTTCTGGCACAATGAAAGAATTTCTTTTTTTCACGAACTGGATCATAAATGAAAGGTAGGAAGAGTTTCCTATATCATAGTTATTGTTCAACAAAACACCACTCCATGGCTTAAATTCATTTTAA-A-AAAGAGAATTTATTGAACATCTAACAC--ACACACATAAAAGGCAGTAAAGACAAATGAAAAGAGGGCAGGATATTGAAGTATACAGACTTTAATGTGGAGTTCTGTATCATAGTAAGTTACTCCACCTTACAGAGGCTGGATTTCCTCTGATTTAGGAAGGCGATGCTAA-GGGGATTGCACAGGTA-----TAAGTATAAAAATGTTATATTTCAGATAAGCCCGCAAGCTTTGTACAAGGCAGAAAATAAATAGATGTAACATT----AATAAATAGTTTATTACATTTGTTTGCTACCTGCAAACTAGAGGAAGCAGGAAACACAGCCACTCTGCTTGATTAGCA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12710141 1266 + 14340318 TAGGCCCATAATTTTCAAAGCCAATCTGTAAGACAGCAACATCTTATGCAAGCTTAGTATTTTGTTGCACAGTGAACATTGTCCAGCTTGGGTAAATTATGTTCAAGA-ATTGCT-GGTGTAAAAAAAAAAAAAAATGATC--GGATTACAATGACTACGGATACAAT----------------------------------------------TACTTCCCTTTAGAAATAT-TATCAGTTATTTACTATGCAACATG--AAAAATTGACAAAGGAAGTAA----ATTGCCTATAAAAGTGTCAG-----CTTGGATCTACATGATAGAAAAATGCCCTTTTTATTATATTACAGAATTGTTTTACAGAA-GTTTTGCTGTACTGTAGTTTTGAGCCAAGGGCAAAGAGAGATGAAATTATTAATTC----TTAATATATT-GTAATTGAAAAGAGGAGAGA-GTCATCTATGCAGGTTATTGGTGTAGCATTTTTCTTCTGTCCTCACCCATTCCA-CATTCACTTTGTA----ATGGA---ATTTTCCTC----GTTCAGAAAACATCCTGGCATGACCAGCTTCCAGTTAGCGCTTATGGAGGGAACTTCCATTTCTAGCAAAGCTCAGCTCATGCATTTGCAAGAGGTATTT-GCAGGAAATGTTT-TG--TTAGAGTGAGCCCTTCTCAACAACGTGAGACATA-------AACATTTATTTTATA-----GAACT-----AAGATG---------------AGAA-------------------------------AAATGTTTACTCAAAAGATAAATAATAAGTGGACACAGAAGGAAAATTGTATTCAATTTCTTAC----CCATCATCTATCTACACCTCGAGCAATCCACCTTGATTCTCTTCAGTTTCCAGTTAATATGGAAAATGCCATTTTCATTATTTTAAGCTTCTAGCACTATGAAAGAATTTCTTTTATCCATGAACTGGGCCATAACAGAAAGGTAGGAAGAGTATCCTATATCATATTTATTGTTCTACAAAACACTGCTCTGCAGCTTCAATTCAGTTTAAGG-AAAGAGAATTTATTGAACATACG--ACATACACACATAAAAGGCAGTAAAAACAAATGGAAAGAG-GCAGGCCCTGGAATCATATAGGCTGTAATGCTGAGTTCTGTATCTCGTTAAGTTCTGCCACCTTACAGAGGCTCAGTTTCCCCTGATTTAGGAAAGGGACGCTAATGGGTATCATAGAAACA-----TCAGTATAAAAATTTTATATTTAAGATAACTCCACAAGCTTTGTACAAGCCAGACAATAAATAGATG-AACTTT----AAAACATTGTTTTTT---TTCCTTTGTTCACTATGTACAGGAGAGAAGAAGAAGCCCAGCCACTCTCCTCGATTAGCA i otoGar3.GL873564 C 0 I 30743 s canFam3.chr18 51743706 1237 - 55844845 TAAGCCTATAATTTTCAAAGTCAATTTATAAGACAGCAGCACCTTATGTAGGCTTACTGTTTTCTAGCATGG-------------------ACAGATTGTTTT-----------------CA---------GGAATTGTTT-----TCATAATGAGCACAGGCATATC----------------------------------------------TGTATCCCTTCAGAAATAT-TATTAAAGATTTCCAATTGAAAATGAAAAAAACTTACAAAGGAA-TAT----ATGGGCTATTGAAAATCCAG-TTAGCTTGATTCTATGTGAAAGAAAAATGTCTTTTT--TTACAGTCTATAATTGTGTTGCATGATGTTTTAGTACATCATAATTTTGGAACAAAAGCAAAGAGAGATGAAGAAATTAAATC----CTAAAATATGAGAAATTTAAAAGAGAAGGAAGGTCAACTTTGAAGGTTATTGATGTAGCATTTATCATCTGTTGTCACATTTTCCATCATTCC-----------ATGTACAGCTGTCACTC--AAGCTCACAGAACA---TATAATGACTAGCTATCAATTAAGCATTATGGAGGGGACTT-CA-TTCTAAGTAGACTCAGTTCATCCATTTGAAAGATTCATTT--TAGGAAATGTTTGTA--TTAGAGTGAACATGTCTTAAATAGAGAAGACACA-------GAAGTATATATTTCGGACATGGATT-----AAGGTAGTC-----CAC---TGGAAGA----------------------------AAAACATTTATTCGAAAGCTAAA-AATA-AGGAGTGCAAAGGACATGTTATATTCAATTCCTTCCTTTTCCACTTGCTTGTTTTACCTTATGTAATTCAACTTGATTTTCTTCAGTTTTTAGTTAACATGGAAAGTATCATGTTCATTATTTTAAGTTTCCAGCATAATGAAATAATTT---TTCCCCATGAACTGTATCATAACTGAAAAGTAGGAAGAGTGTCTTATATCATATTTATTGCTCAACAAAACATTGCTTCTCAGGTTAAATTCAATTTAA-AGAAAGAGAATTTATTGAACATATA--GC--ACATACACTACAGGCAATAAAGA-AAATGGAAAGAAGGGAGGATCTTGAGTTATATAGAATTTAATGCTGAGTTCTCTCTCTC--TAAGTTACTTTGCCCTGTGGAGGCTAAAATTCCTTCAAAGTAAGATGGGGATGCTAATGGG-GTTATACAGGTGTATTATAAATATAAA-ATTTGATA-TTAAGATAACTACA-AAGATTAGTAAAAGCCAGGAAATAGATAGATGTAATATTAATTAATAAATAGTGTATTACATTTGCACAGTATCTACTGA--GGATGAAGCCAGATACACAGCCACTGTGCTTTACTGGGA i canFam3.chr18 I 1236 C 0 s dasNov3.JH578441 1158448 1329 + 1446996 CAGGGCTATAATTTTC-AAGCCAATGTATAAGGGTACAGTATATTGTGAAAACTCACAGCTTTCTGGAATAGTGAT-TTTGGTCAGCTTGGCCAAATTGTTTTCAGAA-ATCATTGGGTCTA---------AAGATTGTATATGGGTCACAATAAAAACAGCCACATA----------------------------------------------CATATCCCTTTAGAAATAC-TATCAATGACTTCCAAAACAACATG--AAAACATGACAAAGGAAATAT----ATTGACTGTAGAAACACCAG-GTAGTTTGGATCTCCATGGAAGAAAAATGTCCTTTTTATTGCATTACGTAATTGTTCTGCACAG---TATGATGCATTACAACTTTGAACCAAGGACAAAGAGCAATGAACGGATTAAGTTTTG-TTAAGGGCTCAGGAATTGAGAAGAGAAGGAAGGCCATCTTTGAAGGTTATTGACTAGGTGTTCATCTTCTGTTGTCACCTTTCCCATCATCCCATGTATGCCTTATGGACAACTTTCACTCATAAATTCAGAGAACAGCATGTAATGACTAGCTAACAACTAATCATTATGGAGGAAACTT-TCTTTCTAGCAAGACTCAGCACATGCATTTGAAAGATGCATTTCTTAGGGAATGCTTATAATTTAGAGTG-GAATTTTATACTGAAATGTGACATGAATGAGCAATGATTAATTTATGCTCATTTATTTGTTGAAACTGCTCTTGGGCATATATAATAGAGATTTGGGTTATGGAATTCCTTTACGAAAAAATATTTCTCTTAAAGCTGTATTATAAGGGAACATAAAGGGTAAATTATACTCAGTTACTTTA----GTACTTGCTTTCTCTATCATGTGCAATCCATTTTGATTTTCTGCAGTTTCTGGTTAACATGGAGAGTGCCATTTTCTTTATTTTAAACTTCTAGAACAATGAA--AACTTTCGTTGTCAATGAACTGAATCATAACC-AAAAGTAGAAAGGGCATTGTATATTGTATCTATTGTTCAGCAAAACACTACTACACTGTTTAAATTCAATTTAA-ATGAAGCAACTTTATTGA---------AC--ATATACATAAAaggcagtaca-atgaatggagagagggcaggatcttgagttagacagactttaatgctgagttctgtatct-gGGAAGTTACATCACCTTACAGAGGCACAATTTCCCCTT-TCTAAGATAGGGATATGAATGAATATCATATATGTGTATTATAAGTACGAAAATAT-ATGTTTAAGGTAACACA--AAGTTTGGTA-AGGGCCAGGAATAAGTAGATGCAACATT--------AATAGTTTATTATATTTGTATATTATATACTGATTAGAGGAAAAATGAAACACAGTCACTGTACTTTCTCAGTA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I a score=44487.000000 s hg38.chrUn_KI270749v1 49459 3 + 158759 TTa s panTro5.chr1 101875741 3 - 228573443 TTA i panTro5.chr1 C 0 I 19432 s panPan2.chr7 108502991 3 - 162613886 TTA i panPan2.chr7 C 0 I 11800 s gorGor5.CYUI01000522v1 29200 3 - 126596 tta i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55753723 3 + 99891981 TTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133450521 3 - 185818997 TTA i rheMac8.chr3 C 0 I 15376 s macFas5.chr3 67280208 3 + 192294377 TTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2762253 3 + 3123512 TTA i macNem1.NW_012011522v1 C 0 I 15238 s cerAty1.NW_012000909v1 2482529 3 + 10077455 TTA i cerAty1.NW_012000909v1 C 0 I 15556 s chlSab2.chr21 5690593 3 + 127223203 TTA i chlSab2.chr21 C 0 I 13537 s manLeu1.NW_012105809v1 1134712 3 - 1799296 TTA i manLeu1.NW_012105809v1 C 0 I 29628 s colAng1.NW_012115910v1 1733513 3 + 6934359 TTA i colAng1.NW_012115910v1 C 0 I 13475 s calJac3.chr8 108093465 3 - 128169293 TTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 714485 3 - 18371965 TTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1374536 3 + 3566421 TTA i cebCap1.NW_016107540v1 C 0 I 9959 s aotNan1.NW_018514471v1 1877190 3 - 9267652 TTA i aotNan1.NW_018514471v1 C 0 I 9798 s otoGar3.GL873564 1628543 3 - 14340318 tca i otoGar3.GL873564 n 30743 C 0 s canFam3.chr18 51744943 3 - 55844845 TTA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1159777 3 + 1446996 TTA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I a score=4853.000000 s hg38.chrUn_KI270749v1 49462 2 + 158759 ca s gorGor5.CYUI01000522v1 29203 2 - 126596 ta i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55753726 2 + 99891981 TA i nomLeu3.chr17 C 0 I 11875 s macFas5.chr3 67280211 2 + 192294377 TA i macFas5.chr3 C 0 I 15361 s calJac3.chr8 108093468 2 - 128169293 TA i calJac3.chr8 C 0 I 14649 s saiBol1.JH378145 714488 2 - 18371965 TA i saiBol1.JH378145 C 0 I 10132 s otoGar3.GL873564 1628546 2 - 14340318 ca i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51744946 2 - 55844845 TA i canFam3.chr18 C 0 I 14651 s dasNov3.JH578441 1159780 2 + 1446996 TA i dasNov3.JH578441 C 0 I 30333 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e manLeu1.NW_012105809v1 1134715 29628 - 1799296 I e macNem1.NW_012011522v1 2762256 15238 + 3123512 I e rheMac8.chr3 133450524 15376 - 185818997 I e aotNan1.NW_018514471v1 1877193 9798 - 9267652 I e cebCap1.NW_016107540v1 1374539 9959 + 3566421 I e colAng1.NW_012115910v1 1733516 13475 + 6934359 I e chlSab2.chr21 5690596 13537 + 127223203 I e cerAty1.NW_012000909v1 2482532 15556 + 10077455 I e panPan2.chr7 108502994 11800 - 162613886 I e panTro5.chr1 101875744 19432 - 228573443 I a score=2959.000000 s hg38.chrUn_KI270749v1 49464 6 + 158759 gagatg---- s gorGor5.CYUI01000522v1 29205 6 - 126596 gagatg---- i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 125013830 6 - 192294377 gagaca---- i macFas5.chr3 T 12546 C 0 s calJac3.chr8 20075470 6 + 128169293 gaggta---- i calJac3.chr8 n 14649 C 0 s saiBol1.JH378145 17657116 6 + 18371965 gaggta---- i saiBol1.JH378145 n 10132 C 0 s otoGar3.GL873564 1628548 10 - 14340318 gagacaaaag i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e manLeu1.NW_012105809v1 1134715 29628 - 1799296 I e macNem1.NW_012011522v1 2762256 15238 + 3123512 I e rheMac8.chr3 133450524 15376 - 185818997 I e aotNan1.NW_018514471v1 1877193 9798 - 9267652 I e cebCap1.NW_016107540v1 1374539 9959 + 3566421 I e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I e colAng1.NW_012115910v1 1733516 13475 + 6934359 I e chlSab2.chr21 5690596 13537 + 127223203 I e cerAty1.NW_012000909v1 2482532 15556 + 10077455 I e nomLeu3.chr17 55753728 11875 + 99891981 I e panPan2.chr7 108502994 11800 - 162613886 I e panTro5.chr1 101875744 19432 - 228573443 I a score=548677.000000 s hg38.chrUn_KI270749v1 49470 108 + 158759 gtacaatgatggttgccagaagctggggggaggaagaaatggggaagtattttttaatgggtatagagtttcagttttacaagatgaaacgaattatggagatggatg s gorGor5.CYUI01000522v1 29211 106 - 126596 gta-aatgatggt-gccagaagctggggggaggaagaaatggggaagtattgtttaatgggtatagagtttcagttttacaagatgaaacgaattatggagatggatg i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 52368143 108 + 185818997 gtacaatgatggttgccagaagctggggggaggaagaaatgaggaaatattgtttaatgggtacagagtttcagttttacaatatgaaacaagttatggagatggatg i rheMac8.chr3 n 15376 C 0 s macFas5.chr3 125013836 108 - 192294377 gtacaatgatggttgccagaagctggggggaggaagaaatgaggaaatattgtttaatgggtacagagtttcagttttacaatatgaaacaagttatggggatggatg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 360926 108 - 3123512 gtacaatgatggttgccagaagctggggggaggaagaaatgaggaaatattgtttaacgggtacagagtttcagttttacaatatgaaacaagttatggagatggatg i macNem1.NW_012011522v1 n 15238 C 0 s cerAty1.NW_012000909v1 7594593 108 - 10077455 gtacaatgatggttgccagaagctggggggaggaagaaatgaggaaatattgtttaatgggtacagagtttcagttttacaatatgaaacgagttatggagatggatg i cerAty1.NW_012000909v1 n 15556 C 0 s chlSab2.chr21 121532277 108 - 127223203 gtacaatgatggttgccagaagctggggggaggaagaaatgaggaaatattgtttaatgggtacagagtttcagttttacaatatgaaacgagttatggagatggatg i chlSab2.chr21 n 13537 C 0 s manLeu1.NW_012105809v1 664251 108 + 1799296 gtacaatgatggttgccagaagctggggggaggaagaaatgaggaaatattgtttaatgggtacagagtttcagttttacaatatgaaacgagttatggagatggatg i manLeu1.NW_012105809v1 n 29628 C 0 s colAng1.NW_012115910v1 5200508 108 - 6934359 gtacaatgatggttgccagaagctggggggaggaagaaatggggaaatattgtttaatgggtgcagagtttcagttttacaatatgaaaccagttatggagatggatg i colAng1.NW_012115910v1 T 12617 C 0 s calJac3.chr8 20075476 107 + 128169293 gtaaaatgatggaggccag-agctgaggaaaggaagaaatggggaactattgtttaatgagtacagagtttcggttttacaagatgaaacgagttatagagatgggta i calJac3.chr8 C 0 I 38 s saiBol1.JH378145 17657122 108 + 18371965 gtaaaatgatggttgctagaagctgaagaaaggaagaaatggagaagtattgtttaatgagtacagagtttcagttctacaagatgaaacaagttctagagatggata i saiBol1.JH378145 C 0 I 29 s otoGar3.GL873564 1628558 107 - 14340318 gtagaatggtggttcccagaggcttgggagaaggagaaatagagaaataatgtgtaatgagcagagaatctca-ttttacaagatgaactgaattatggaaatggatg i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1877193 9798 - 9267652 I e cebCap1.NW_016107540v1 1374539 9959 + 3566421 I e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I e nomLeu3.chr17 55753728 11875 + 99891981 I e panPan2.chr7 108502994 11800 - 162613886 I e panTro5.chr1 101875744 19432 - 228573443 I a score=65478.000000 s hg38.chrUn_KI270749v1 49578 20 + 158759 gtagggacg-gctgcacaatg s gorGor5.CYUI01000522v1 29317 19 - 126596 -tagggaca-gctgcacaatg i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 52368251 20 + 185818997 gtagggatg-gctgcacaatg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125013944 20 - 192294377 gtagggatg-gctgcacaatg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 361034 20 - 3123512 gtagcgatg-gctgcacaatg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7594701 20 - 10077455 gtagggatg-gctgcacaatg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121532385 20 - 127223203 gtagggatg-gctgcacaatg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 664359 20 + 1799296 gtagggatg-gcggcacaatg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5200616 20 - 6934359 gtagggatg-gctgcacaata i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 1628665 21 - 14340318 gccgtgatgttttgcacaatg i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1877193 9798 - 9267652 I e cebCap1.NW_016107540v1 1374539 9959 + 3566421 I e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I e saiBol1.JH378145 17657230 29 + 18371965 I e calJac3.chr8 20075583 38 + 128169293 I e nomLeu3.chr17 55753728 11875 + 99891981 I e panPan2.chr7 108502994 11800 - 162613886 I e panTro5.chr1 101875744 19432 - 228573443 I a score=37265.000000 s hg38.chrUn_KI270749v1 49598 9 + 158759 ttatgactc s gorGor5.CYUI01000522v1 29336 9 - 126596 ttatgacta i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 52368271 9 + 185818997 ttatgacta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125013964 9 - 192294377 ttatgacta i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 361054 9 - 3123512 ttatgacta i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7594721 9 - 10077455 ttatgacta i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121532405 9 - 127223203 ttatgacta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 664379 9 + 1799296 ttatgacta i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5200636 9 - 6934359 ttatgacta i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17657259 9 + 18371965 tcattacta i saiBol1.JH378145 I 29 C 0 s otoGar3.GL873564 1628686 9 - 14340318 ttgtgaata i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1877193 9798 - 9267652 I e cebCap1.NW_016107540v1 1374539 9959 + 3566421 I e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I e calJac3.chr8 20075583 38 + 128169293 I e nomLeu3.chr17 55753728 11875 + 99891981 I e panPan2.chr7 108502994 11800 - 162613886 I e panTro5.chr1 101875744 19432 - 228573443 I a score=810828.000000 s hg38.chrUn_KI270749v1 49607 175 + 158759 tatttagtaccactgaactgtacacttaaaatggttaacagagtacattttatgttatgtgtattttaccacagt----aaaaaaaTAAAATACCTTAGGAACATTTTCATGGAAAA------------GCCCACATAAAATTCATTTTAATGCACGTGTTTATGCATAGCTTTGTATTTTTCTCTTTTCT s gorGor5.CYUI01000522v1 29345 172 - 126596 tatttagtaccactgaactgtacacttaaaatggttaacagagtacattttatgttatgtgtattttaccacaat----aaaaaaa--aAATACCTTAGGAACATTTTCATGAAAAA------------GCCCACATAAA-TTCATTTTAATGCACGTGTTTATGCATAGCTTTCTATTTTTCTCTTTTCT i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 52368280 170 + 185818997 tatttagtaccactgaactatatacttaaaatggtaaacagagtacatt-----ttatgtgtattttacgacaat----aaaaaaaTAAAATACCTTAGGAACATTTTCATGAAAGA------------GTTCACATAAAATTCATTTTAATGCATATGTTTATGCATAGCTTTCTATTTTTCTCTTTTCT i rheMac8.chr3 C 0 n 0 s macFas5.chr3 125013973 170 - 192294377 tatttagtaccactgaactatatacttaaaatggtaaacagagtacatt-----ttatgtgtattttacgacaat----aaaaaaaTAAAATACCTTAGGAACATTTTCATGAAAGA------------GTTCACATAAAATTCATTTTAATGCATATGTTTATGCATAGCTTTCTATTTTTCTCTTTTCT i macFas5.chr3 C 0 I 1 s macNem1.NW_012011522v1 361063 170 - 3123512 tatttagtaccactgaactatatacttaaaatggtaaacagagtacatt-----ttatgtgtattttacgacaat----aaaaaaaTAAAATACCTTAGGAACATTTTCATGAAAGA------------GTTCACATAAAATTCATTTTAATGCATATGTTTATGCATAGCTTTCTATTTTTCTCTTTTCT i macNem1.NW_012011522v1 C 0 n 0 s cerAty1.NW_012000909v1 7594730 170 - 10077455 tatttagcaccactgaactatatacttaaaatggtaaacagagtacatt-----ttatgtgtattttacgacaat----aaaaaaaTAAAATACCTTACGAACATTTTCATGAAAGA------------GTTCACATAAAATTCATTTTAATGCATATGTTTATGCATAGCTTTCTATTTTTCTCTTTTCT i cerAty1.NW_012000909v1 C 0 n 0 s chlSab2.chr21 121532414 170 - 127223203 tatttagtaccactgaactatatacttaaaatggtaaacagagtacatt-----ttatgtgcattttatgacaat----aaaaaaaTAAAACACCTTAGGAACATTTTCATGAAAGA------------GTTCACATAAAATTCATTTTAATGCATATGTTTATGCATAGCTTTCTATTTTTCTCTTTTCT i chlSab2.chr21 C 0 n 0 s manLeu1.NW_012105809v1 664388 170 + 1799296 tatttagtaccactgaactatatacttaaaatggtaaacagagtacatt-----ttatgtgtattttatgacaat----aaaaaaaTAAAATACCTTACGAACATTTTCATGAAAGA------------GTTCACATAAAATTCATTTTAATGCATATGTTTATGCATAGCTTTCTATTTTTCTCTTTTCT i manLeu1.NW_012105809v1 C 0 n 0 s colAng1.NW_012115910v1 5200645 175 - 6934359 tttttagtaccactgaactatatatttaaaatggttaacagagtacattttatgttatgtgtattttacgacaat----aaaaaaaTAAAATACCTTAGGAACATTTTCATGAAAGA------------GTTCACATAAAATTCATTTTAATGCATATGTTTATGCATAGCTTTCTATTTTTCCCTTTTCT i colAng1.NW_012115910v1 C 0 n 0 s calJac3.chr8 20075621 182 + 128169293 tatttagtacctctgaactgtacac-taaaatgatta--acagtacattttatgttatgtgtattttaccacaat-----aaaaaaTAAAACACCTTAGAAACATTTTCACCAAAGAGACAC-AGGACTGACCACATAAAATTTATTTTAATGCTTATGTTTATGCATAAATTTCTATTTTTCTCTTTTAT i calJac3.chr8 I 38 C 0 s saiBol1.JH378145 17657268 187 + 18371965 tatttagtaccactgaactgtacacttaaaatggtgaacacactacatttgacgttatgtgtattttaccacaatt---aaaaaaaCAAAATACCTTAGAAACATTTTCACGAAAGAGACAC-AGGACTGTTCACATAAAATTTATTTTAATGCATGTGTTTATACATAACTTTCTATTTTTCTCTTTTAT i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 1628695 191 - 14340318 tatttaataccacttagctgtacacttaaaatggctaagatactaaattttatgttttgtgtattttgccataatgaaaaaaaAAATCAAATACTTTAAAAAGATTTTTGTAAAAGAGGCACAAGGACCATTCTCAGAAAACTCATTGTAATGAATGCGTTTATGCATAGTTTTGTATTTTTCTATTTTTA i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1877193 9798 - 9267652 I e cebCap1.NW_016107540v1 1374539 9959 + 3566421 I e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I e nomLeu3.chr17 55753728 11875 + 99891981 I e panPan2.chr7 108502994 11800 - 162613886 I e panTro5.chr1 101875744 19432 - 228573443 I a score=13749.000000 s hg38.chrUn_KI270749v1 49782 16 + 158759 -CTTTATCTTCCAAAtt s gorGor5.CYUI01000522v1 29517 16 - 126596 -CTTTATATTCCAAACT i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 125014144 16 - 192294377 -ATTTATATTCCAAATT i macFas5.chr3 I 1 n 1 s calJac3.chr8 20075803 16 + 128169293 -ATTTATCTTCCAAATT i calJac3.chr8 C 0 n 0 s saiBol1.JH378145 17657455 16 + 18371965 -CTTTATATACCAAATT i saiBol1.JH378145 C 0 n 0 s otoGar3.GL873564 1628886 16 - 14340318 TGTTCAT-TTCCAAATT i otoGar3.GL873564 C 0 n 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e manLeu1.NW_012105809v1 664558 0 + 1799296 I e macNem1.NW_012011522v1 361233 0 - 3123512 I e rheMac8.chr3 52368450 0 + 185818997 I e aotNan1.NW_018514471v1 1877193 9798 - 9267652 I e cebCap1.NW_016107540v1 1374539 9959 + 3566421 I e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I e colAng1.NW_012115910v1 5200820 0 - 6934359 I e chlSab2.chr21 121532584 0 - 127223203 I e cerAty1.NW_012000909v1 7594900 0 - 10077455 I e nomLeu3.chr17 55753728 11875 + 99891981 I e panPan2.chr7 108502994 11800 - 162613886 I e panTro5.chr1 101875744 19432 - 228573443 I a score=2489.000000 s hg38.chrUn_KI270749v1 49798 5 + 158759 ctaat s gorGor5.CYUI01000522v1 29533 5 - 126596 CTAAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55765603 5 + 99891981 ctagc i nomLeu3.chr17 I 11875 C 0 s macFas5.chr3 67295574 5 + 192294377 ccagc i macFas5.chr3 I 15361 C 0 s saiBol1.JH378145 724622 5 - 18371965 ccaac i saiBol1.JH378145 I 10132 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 1628902 0 - 14340318 I e manLeu1.NW_012105809v1 664558 0 + 1799296 I e macNem1.NW_012011522v1 361233 0 - 3123512 I e rheMac8.chr3 52368450 0 + 185818997 I e aotNan1.NW_018514471v1 1877193 9798 - 9267652 I e cebCap1.NW_016107540v1 1374539 9959 + 3566421 I e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I e calJac3.chr8 20075819 0 + 128169293 I e colAng1.NW_012115910v1 5200820 0 - 6934359 I e chlSab2.chr21 121532584 0 - 127223203 I e cerAty1.NW_012000909v1 7594900 0 - 10077455 I e panPan2.chr7 108502994 11800 - 162613886 I e panTro5.chr1 101875744 19432 - 228573443 I a score=153775.000000 s hg38.chrUn_KI270749v1 49803 25 + 158759 cagagaagggaatcacctctgtacc s panTro5.chr1 101895176 25 - 228573443 CAGAGAAGGGAATCCCCTCTGTACC i panTro5.chr1 I 19432 C 0 s panPan2.chr7 108514794 25 - 162613886 CAGAGAAGGGAATCCCCTCTGAACA i panPan2.chr7 I 11800 C 0 s gorGor5.CYUI01000522v1 29538 25 - 126596 CAGAGAAAGGAATCCCCTCTGTACC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55765608 25 + 99891981 aagagaagggaatcctctctgtaca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133465900 25 - 185818997 cagagaaggaaatcccctctgaaca i rheMac8.chr3 I 15376 C 0 s macFas5.chr3 67295579 25 + 192294377 cagagaaggaaatcccctctgaaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777494 25 + 3123512 cagagaaggaaatcccctctgaaca i macNem1.NW_012011522v1 I 15238 C 0 s chlSab2.chr21 5704133 25 + 127223203 cagagaagggaatcccctctgaaca i chlSab2.chr21 I 13537 C 0 s manLeu1.NW_012105809v1 1164343 25 - 1799296 CAGAGAAGGAAATCCCCTCTGAACA i manLeu1.NW_012105809v1 I 29628 C 0 s colAng1.NW_012115910v1 1746991 25 + 6934359 cagagaagggaatcccctttgaaca i colAng1.NW_012115910v1 I 13475 C 0 s saiBol1.JH378145 724627 25 - 18371965 cagagaggggaatcccctctgaact i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1384498 25 + 3566421 cagagaggggaatcccctctgaaca i cebCap1.NW_016107540v1 I 9959 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 1628902 0 - 14340318 I e aotNan1.NW_018514471v1 1877193 9798 - 9267652 I e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I e calJac3.chr8 20075819 0 + 128169293 I e cerAty1.NW_012000909v1 7594900 0 - 10077455 I a score=5040960.000000 s hg38.chrUn_KI270749v1 49828 746 + 158759 tccaggatattcagtaaagaccactggagtttcatgccctagtgacagtgctcatatagctccaaattacagatggctctagactaactccacaaagtttaaagagaagatttaaaacaacaacagacaaatactcatcctgaagttactgaactgcctgccac----aacattgttcaaaggtagccaataaaatctagatagtcaatagcataacctcaaaaaactccccccaaaaaaaactctgacatgcaaagaagccgtaagatatatatacttaagacatatattaacaagataaaaataagtcatttataaatgacagaaaagaaggaaatttcaaggtccttaaagtaa-acatattttataaat----------------------------------------------acatataggtaaatacatatat------------atgtcaaggcacttaaatgaaaattgaatatag---aaaaatagaagttataaaatgaaaaatgtgacatgtatagatgaaaaataaatattagaaataaaaattccatgagatagaataagtaatggattttacccaaacatcagaaaatttatag-aaaaaaatagaagctttacaaactaaaggacaaagggtaaaccaaaataagaaagccagaaactcactgataagtcagacaatatgcagcagtgtaacatacatgtaattaatatctcaaaaaggatgggtgggggaattataggtgaataaagaatGGTACACTCATTCCTGAGGGCACCGAGGAGGGAAGATAGCTTTAG s panTro5.chr1 101895201 741 - 228573443 TCCAGGATATTCAGTAAAGACCACTGGAGGTTCATGCCCTAGTGACAGTGCTCATTTAGCTCAAAATTACTGATGGCTCTAGACTTACTCAACAAAGTTTAAAGAGAAGATTTAAAACAACAACAGAAAAATACTCATCCTGAAGGTACTGAACTGCCTTCCAC----AACATTGTTCAAAGGTTGCCAATCAAATCTAGATATTCAATAGCATAACACCAAAA---TACCCCCAAAAGAAACTCTGACATGCAAAGAAGCCGTAAGATATA----ATTAAGACATATATTAACAGGATAAAAATAAGTCATTTATAAATGACAGAGAAGAAAGAAATTTCAAGGTCCTAAAAGtaa-atatattttataaat----------------------------------------------acatatagataaatacatatat------------atGTCAGGGTACTTAAATGAAAATTGAACATAGGAGAAAAATAGAAGTTATAAAATGAAAA-TGTGACATGTATAGATGAAAAATAAATATTTGAAATAAAAATTCCATGAGATAGAATAAGTAATGGATTTTACCCTAACAACAGAAAATTTATAG-AACAAAATAGAAGCTTTACAAACTAAAGGACAAAGGGTAAACTAAAATAAGAAAGCCAGAAACTCACTGATATGTCAGACAATATGCAGCAGTGTAACATACATGTAATCAATATCTCAAAAAGGATGGGTGGGGAAATTATAGGTGAATAAAGAATGGTACACTCATTCCTGAGGGCAGCGAGGAGGGAGGATAGCTTTAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108514819 747 - 162613886 TCCAGGATATTCAGTAAAGACCACTGGAGTTTCATTCCCTAGTGATAGTGCTCATTTAGCTCCAAATTACAGATGGCTCTAGACTAATTCAACAAAGTTTAAAGAGAAGATTTAAAACAACAACAGAAAAATACTCATCCTGAAGTTACTGAACTGCCTGCCAC----AACATTGTTCAAAGGTAGCTAATAAAATCTAGATATTCAATAGCATAACATCAAAA---TACCCCCCAAAAAAACTCTGACATGCGAAGAAGCCGGAAGATATATATTATTAAGATATATATTAACAGGATAAATATAAGTCATTTATAAATGACACAGAAGAAAGAATTTTCAAGGTCCTTAAGGTAatatatattttataaat----------------------------------------------acatatagataaatacatatat------------atGTCAAATTACTTAAATGAAAATTGAACATAGGAGAAAAATAGAAGTTATGAAATGAAAA-TGTGACATGTATAGATGAAAAATGAATATTTGAAATAAAAATTCCATGAGATAGAATAAGTAATGGATATTACCCTAACATCAGAAAATTTATAGAAAAAAAATAGAAGCTTTACAAACTGAAGGACAAAGGCTAAACTAAAATAAGAAAGCCAGAAACTCACTAATACGTGAGACAATATGCGGCAGTGTAACATACATGTAGTTGATATCTCAAAAAGGATGGGTGGGGGACTTATAGTTGAATAAAGAATGGTACACTCATTCCTAAGGGCACCGAGGAGGGAGGATAGCTTAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 29563 741 - 126596 TCCAGGATATTCAGTAAA-ACCACTGGAGGTTCATGCCCTAGTGACAGTGCTCATTTAGCTCCAAATTACAGATGGCTCTAGACTAACTCCACAAAGTTTAAAGAGAAGATTTAAAACAACAACAGACAAATACTCATCCTGAAGTTACTGAACTGCCTGCCAC----AACATTGTTCAAAGGTAGC-AATAAAA-CTAGGTATTCAATAGCATAACATCAAAT-----ACCCAAAAAAAACCTCTGACATGCAAAGAAGCCGTAAGATATATATAATTAAGATATATATTAACAGGATAAAAATAAGTCATTTATAAATGACAGAAAAGAAGGAAATTTCAAGGTCCTTAAAGtaa-atatattttataaat----------------------------------------------acatatagataaatacatatat------------atGTCAAGGTACTTaaatgaaaattgaacataggagaaaaatagaagttataaaatgaaaaatgtgacatgtatagatgaaaaataaatatttgaaataaaaatTCCATGAGATAGAATAAGTAATGGATTTTACCCTAACATCAGAAAATTTATAG-AACAAATTAGAAGCTTTACAAACTAAAGGACAAAGGGTAAACTAAAATAAGAAAGCCAGAAACTCACTGATACGTCAGACAATATGCAGCAGTGTAACATACATGTAATTAATATCTCAAAAAGGATGGGTGGGGCAATTACAGGTGAATAAAGAATGGAACACTCATTCCTGAGGGCAACGAGGAGGGAGGATAGCTTTAG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55765633 747 + 99891981 tccaggatattcagtaaaggccactggag-ttcatgccctagtgatagtgctcatttagctgcaaattacagatggctctagactaactcaacaaagtttaaagagaagatttaaaacaacaacagaaaaatactcatcttgaagttactgaactgcctgccac----aacattgttcaaaggtagccaataaaatctacatattcaataccataacatcaaaatatgccccccaaagaaacctctgacatgcaaagaagctggaagatatacattattaagatatatattaacaggataaaaataagtcacttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaat----------------------------------------------acatatagataaatatatatat------------atgtcaaattacttaaatgaaaattgaacacagaagaaaaatagaagttataaaatgaaaa-tgtgacgtgtatagatgaaaaataaatatttgaaataaaaattccatgagatagagtaagtaatggattttaccctaacatcagaaaatttatag-aa-aaaatagaagctttacaaactgaaggacaaagggtaaactaaaataagaaagccagaaactcactgatatgtgagccaatatgcagcagtgtaacatacatgtaactgatatctcaaaaagGATGGGTGGGGGAATTATAGTTGAATAAAGAATGGTACTCTCATTCCTAAGGGCACCGAGGAGGGAAGATGGTTTGAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133465925 712 - 185818997 tccaagatattcagtaaagaccactggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacaggaaaatactcatcctaaagttactgaactgcctgccac----aacactgttcaaaggtagccaataaaatccagatattgaatagcataacatcaaaa---tacccc----aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaataggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaag----------------------------------------------atatatagataa----atatat------------atgtcaaattacttaaatgaaaattgaacataggagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaatatttgaaataaaaattccatgagatacaataagtaatggattttaccctaacatcagaagatttatag-acaaaaatagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggTGGGTGGGGGAATTACAGTTGAATAAagaatgggacactcattcctgag--------------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67295604 712 + 192294377 tccaagatattcagtaaagaccacgggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacaggaaaatactcatcctaaagttactgaactgcctgccac----aacactgttcaaaggtagccaataaaatccagatattgaatagcataacatcaaaa---tacccc----aaaatttctgacatgcaaagaagcaggaagatatATATTATTAAGATATATATTAACAGGATAAAAATAGGTCATTTATAAATGACAGAGAAGAAGGAATTTTCAAGGTCCTTAAAGTAatatatattttataaag----------------------------------------------atatatagataa----atatat------------atGTCAAATTACTTAAATGAAAATTGAACATaggagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaatatttgaaataaaaattccatgagatacaataagtaatggattttaccctaacatcagaagatttatag-acaaaaatagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggTGGGTGGGGGAATTACAGTTGAATAAagaatgggacactcattcctgag--------------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777519 712 + 3123512 tccaagatattcagtaaagaccactggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacaggaaaatactcatcctaaagttactgaactgcctgccac----aacactgttcaaaggtagccaataaaatccagatattgaatagcataacatcaaaa---tacccc----aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaataggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaag----------------------------------------------atatacagataa----atatat------------atgtcaaattacttaaatgaaaattgagcataggagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaatatttgaaataaaaattccatgagatacaataagtaatggattttaccctaacatcagaagatttatag-acaaaaatagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggtggGTGGGGGAATTACAGTTGAATAAagaatgggacactcattcctgag--------------------------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498088 712 + 10077455 tccaagatattcagtaaagaccactggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacaggaaaatactcatcctaaagttactgaactgcctgccac----aacactgttcaaaggtagccaataaaatccagatattgaatagcataacatcaaaa---tacccc----aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaataggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaag----------------------------------------------atatatagataa----atatat------------atgtcaaattacttaaatgaaaattgaacataggagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaatatttgaaataaaaattccatgagatacaataagtaatggattttaccctaacatcagaagatttatag-acagaaatagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggtggGTGGGGGAATTACAGTTGAATAAagaatgggacattcattcctgag--------------------------- i cerAty1.NW_012000909v1 I 15556 C 0 s chlSab2.chr21 5704158 712 + 127223203 tccaagatattcagtaaagaccactggaggttcatgccctagggatagtgctcatttagctctaaattacagatggctctagaataactcaagaaagtttaaagagaagatttaaaacagcaacaggaaaatattcatcctaaagttactgaactgcctgccac----gacactgttcaaaggtagccaataaaatccagatattgaatagcataacatcaaaa---tacccc----aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaataggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaag----------------------------------------------atatatagataa----atatat------------atgtcaaattacttaaatgaaagttgaacataggagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaatatttgaaataaaaattccatgagatacaataagtaatggattttaccctaacatcagaagatttatag-acaaaaatagaagctttacaaactgaaggacaaaggggaaactaaaataagaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaattggtatctcaaaaagggtggGTGGGGGAATTACAGTTGAATAAagaatgggacactcattcctgag--------------------------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1164368 712 - 1799296 TCCAAGATATTCAGTAAAGACCACTGGAGGTTCATGCCCTAGTGATAGTGCTCATTTAGCTCTAAATTACAGATGGCTCTAGAATAACTCAACAATGTTTAAAGAGAAGATTTAAAACAGCAACAGGAAAATACTCATCCTAAAGTTACTGAACTGCCTGCCAC----AACACTGTTCAAAGGTAGCCAATATAATCCAGATATTGAATAGCATAGCATCAAAA---TACCCC----AAAATTTCTGACATGCAAAGAAGCAGGAAGACATATATTATTAAGATATATATTAACAGGATAAAAATAGGTCATTTATAAATGACAGAAAGGAAGGAATTTTCAAGGTCCTTAAAGTAatatatatttcataaag----------------------------------------------atatatagataa----atatat------------atGTCAAATTACTTAAATGAAAATTGAACATAGGagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaatatttgaaataaaaattccatgagctaaaataagtagtggattttaccctaacatcagaagatttatag-acaaaaatagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggTGGGTGGGGGAATTATAGTTGAATAAagaatgggacactcattcctgag--------------------------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747016 709 + 6934359 tccaagatattcaataaagaccactggaagttcatgccctagtgatagtgctcatttagctctaaattacagatggctctagaataactcaacaaagtttaaagagaagatttaaaacagcaacaggaaaatactcatcctaaagttactgaactgcctgccac----aacactgttcaaaggtagccaataaaatccaggtattgaatagcataacatcaaaa---tacccc----aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaataagtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaag----------------------------------------------acatatagataa----atacat------------atgtcaaattgcttaaatgaaaattgaacat---agaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaatctttgaaatgaaaattccgtgagatataataagtaatggattttaccctaacatcagaagatttatag-acaaaaatagaagctttacaaactgaaggacaaaggaggaactaaaataagaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggtggGTGGGGGAATTATAGTTGAATAAagaatgggacactcattcctgag--------------------------- i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 724652 769 - 18371965 tccaggatattcagtaaagaccagtggaggttcacgccctagtgatagtgctcagttagctctgaactaaagatgactctagacaaactcaacaaagtttaaagagaagatttaaaa---caacagaaaaatactgatcctgaagtcactgaactgcctgccacaataaacactattcaaaggtagccaataaattccagatattcaatagcataacatcaaag---tagcccccaacaaaaccctggcatgcaaagaaacagaaagatatgtattattaatatatgtattaacaggag-aaaataagtcatttataaatgacagagaaGAAGGAATTTTCAAGGTCCTTAAAGTAATATATATCTTATAGacacacacacacacacacacacacacatacacacacatatacacacacacacacatatacaTATATATATATAAACATAACGATGTCAA--TTTTTAAATGAAAATTGAACATAGGGAAAAAATAGAAGTTATA-----AAAAATGTGACATGTATAGATGAACAATAAATGTTTAAAATAAAAATTCCACAAGACAGAATAAGTAACGAATTTTGCCCTAACATCTGAAAGTttacag-acaaaaatagaagctttacaaactgaaggacaaaggggaaactaaaataggaaagccagaagctcactgatccaggagccagcatgcagccctgtaacatacgtgtcattggtatctcagaaagGATGGGTGTGGGAATTACAGTTGAATAAATaatagtacactcattcctg----------------------------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1384523 738 + 3566421 tccaggatattcagtaaagaccaatggaggttcatgccctagtgataatgctcagttagctctgaattaaagatggctctaggcaaactcaacaaagtttaaagagaagatttaaaa---caacagaaaaatactgatcctgaaatcactgaactgcctgccacaacaaacattgttcaaaggtagccaataaattccagatattcaatagcataacatcaaag---taccccccaacaaaaccctgacatgcaaagaaacaggaagatatatattattaagatatatatgaacaggagaaaaataaatcatttataaatgacagagaagagggaattttcaaggtccttaaagtaatatatattttataaatacacacacacacacacac--------------------acacacacacacatatataaatacatatat------------atgtcaaatttcttaaatgaaaattgaacac--ggaaaaaatagaagttata-----aaaaatgtgacacatatagatgaataataaatgtttaaaataaaaattccatgagacagaataagtaatggattttaccctaacatcagaaaatttacag-acaaaaatagaagctttacaaactgaaggacaaaggggaaactaaaataggaaagccagaaactcactgatccatgagacgatatgcagccatgtaacatacgtgtaattggtatctcaaaaaggatgggtgggggaaTTATAGTTGAATAAATAATAGTAcactcattcctg----------------------------- i cebCap1.NW_016107540v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 1628902 0 - 14340318 I e aotNan1.NW_018514471v1 1877193 9798 - 9267652 I e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I e calJac3.chr8 20075819 0 + 128169293 I a score=3771.000000 s hg38.chrUn_KI270749v1 50574 8 + 158759 ATTTctaa s panTro5.chr1 101895942 8 - 228573443 ATTcctaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 108515566 8 - 162613886 ATTcctaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 30304 7 - 126596 a-tcctaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55766380 8 + 99891981 TTTcctaa i nomLeu3.chr17 C 0 C 0 s saiBol1.JH378145 725421 1 - 18371965 -------a i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385261 1 + 3566421 -------a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886991 8 - 9267652 atttctga i aotNan1.NW_018514471v1 I 9798 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 1628902 0 - 14340318 I e manLeu1.NW_012105809v1 1165080 0 - 1799296 C e macNem1.NW_012011522v1 2778231 0 + 3123512 C e rheMac8.chr3 133466637 0 - 185818997 C e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I e calJac3.chr8 20075819 0 + 128169293 I e colAng1.NW_012115910v1 1747725 0 + 6934359 C e chlSab2.chr21 5704870 0 + 127223203 C e cerAty1.NW_012000909v1 2498800 0 + 10077455 C e macFas5.chr3 67296316 0 + 192294377 C a score=579829.000000 s hg38.chrUn_KI270749v1 50582 72 + 158759 gggagggta-ttatccattcatgaagg-tccaaccccatgaccaaa-caccttccagtaagccccacctgcaaca s panTro5.chr1 101895950 72 - 228573443 gggcgggta-ttatccattcatgaagg-tccaaccccatgaccaaa-cacctcccagtgagccccacctgcaaca i panTro5.chr1 C 0 C 0 s panPan2.chr7 108515574 72 - 162613886 gggagggta-ttatccattaacgaagg-tccatccccatgacccaa-cacctcccagtaagccccacctgcaaca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 30311 72 - 126596 gggagggta-ttatccattcatgaagg-tccaaccccatgaccaaa-cacctcccagtaagccccacctgcaaca i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55766388 71 + 99891981 gggagggta-ttatccattcatgaagg-tccatccccatgacccaa-cacct-ccagtaagccccacctgcaaca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133466637 72 - 185818997 ggaggggta-ttatccgttcctgaggg-tccattcccatgacccaa-cacctcccagtaagccctacctgcaaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296316 72 + 192294377 ggaggggta-ttatccgttcctgaggg-tccattcccatgacccaa-cacctcccagtaagccctacctgcaaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778231 72 + 3123512 ggaggggta-ttatccgttgctgaggg-tccattcccatgacccaa-cacctcccagtaagccctacctgcaaca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498800 72 + 10077455 ggaggggta-ttatccgttcgtgaggg-tccattcccatgacccaa-cacctcccagtaagccctacctgcaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704870 72 + 127223203 ggaggggta-ttatcccttcgtgaggg-tccattcccatgacccaa-cacctcccagtaagccctgcctgcaaca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165080 72 - 1799296 ggaggggta-ttatccgttcgtgaggg-tccattcccatgacccaa-cacctcccagtaagccctacctgcaaca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747725 72 + 6934359 ggaggggta-ttatccattcatgagag-tccattcccatgacccaa-cacttcccagtaagccctacctgcaaca i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 725422 58 - 18371965 gagagggta-tta---------------tccatctccatgacccaa-catctcccagtaggtcccaccttcaaca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385262 71 + 3566421 gcgagggta-ttatccattcatga-gg-tccatccccatgacccaa-catatcccaataggtcccaccttcaaca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886999 72 - 9267652 gggaggata-ttatccatttatga-ag-tccatccccatgacccaattatctcccagtaggtcccaccttcaaca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12742150 72 + 14340318 gggagggcatttacctattcaggagggattcacccc--tgacccag-cacctcccactgggccccagctctaaca i otoGar3.GL873564 I 30743 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I e calJac3.chr8 20075819 0 + 128169293 I a score=291294.000000 s hg38.chrUn_KI270749v1 50654 30 + 158759 ttggggatcaaattttaacatgaga-ttgga s panTro5.chr1 101896022 30 - 228573443 ttggggatcaaattttaacatgaga-ttgga i panTro5.chr1 C 0 C 0 s panPan2.chr7 108515646 31 - 162613886 ctggggatcaaagtttaacatgagatttgga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 30383 30 - 126596 ttgcggatcaaattttaacatgaga-ttgga i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55766459 31 + 99891981 ctggggatcaaattttaacatgagatttgga i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133466709 31 - 185818997 cttggtatcaaatttcagcatgagatttgga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296388 31 + 192294377 cttggtatcaaatttcagcatgagatttgga i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778303 31 + 3123512 cttggtatcagatttcagcatgagatttgga i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498872 31 + 10077455 cttggtatcagatttcagcatgaaatttgga i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704942 31 + 127223203 cttggtatcagatttcagcatgagatttgga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165152 31 - 1799296 cttggtatcaaatttcagcatgagatttgga i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747797 31 + 6934359 ctggggatcaaatttcagcatgagatttgga i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108108119 31 - 128169293 ttggggatcaaattttaacatgagatttgga i calJac3.chr8 I 14649 C 0 s saiBol1.JH378145 725480 31 - 18371965 ctggggatcaaattttaacgtgagatttgga i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385333 31 + 3566421 ctggggatcaaattttaacatgagatttgga i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1887071 31 - 9267652 ctggggatcaaattttaacatgagatttgga i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12742222 31 + 14340318 tcagggaccaagtttcaacatgcagtttgga i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51744948 14651 - 55844845 I e dasNov3.JH578441 1159782 30333 + 1446996 I a score=280529.000000 s hg38.chrUn_KI270749v1 50684 27 + 158759 aggggcaagcattcaaaccatagcaAG s panTro5.chr1 101896052 27 - 228573443 agggtcaagcattcaaaccatagcaAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108515677 27 - 162613886 aggggcaagcattcaaaccatagcaAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 30413 27 - 126596 aagggcaagctttcaaaccatagcaAG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55766490 27 + 99891981 aggggcaagcattcaaaccgtagcaAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133466740 27 - 185818997 aggggcaagctttcaaaccatagcaAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296419 27 + 192294377 aggggcaagctttcaaaccatagcaAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778334 27 + 3123512 aggggcaagctttcaaaccatagcaAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498903 27 + 10077455 aggggcaagctttcaaaccatagcaAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704973 27 + 127223203 aggggcaagctttcaaaccatagcaAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165183 27 - 1799296 aggggcaagctttcaaaccatagcaAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747828 27 + 6934359 aggggcaagctttcaaaccatagcaAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108108150 27 - 128169293 gaggacaagcattcaaacggtagcaAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 725511 27 - 18371965 gaggacaagcattcaaaccatagcaAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385364 27 + 3566421 gaggacaagcattcaaaccgtagcaAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1887102 27 - 9267652 gaggacaagcattcaaaccatagcaAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12742253 27 + 14340318 ggagacaaacaaccaaaccatagcaGT i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1190115 13 + 1446996 AAGGGCAAGCATT-------------- i dasNov3.JH578441 I 30333 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51744948 14651 - 55844845 I a score=1740616.000000 s hg38.chrUn_KI270749v1 50711 177 + 158759 AGTTAAATTTCCTTTTT-------AAAAAAATCACTGATATGATTCCATTTCGCCATAGATAAAAGCTAGTA-TTTCAGCCTACC----ATTGAGTGTGCTTATAGCTCACCAAAAGGGCACTCTGTCTCGGGAATACAGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT s panTro5.chr1 101896079 176 - 228573443 AGTTAAATTTCCTTTTT------TAAAAAAATCACTGATATGATTCCATTTCGCCATAGATAAAAGCTAGTA-TTTCAGCCTACC----ATTGAGTGTACTTATAGCTCACCAAAAGGGCACTCTGTCTCAGGAATACAGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAG--CAATGAGGGAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108515704 177 - 162613886 AGTTAAATTTCCTTTTT--------AAAAAATCACTGATATGATTCAATGTCACCATAGATAAAAACTAATATTTTCAGCCTACC----ATTGAGTGTACTTATAGCTAACCAAAAGGGCACTCTGTCTCGGGGATACAGATTTGCCTAGAGGTATCCTATCACAGTC-AAAGAAAGAGCAATGAGGGAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 30440 176 - 126596 AGTTAAATTTCCTTTTA--------AAAAAATCACTGATATGATTCCATTTCGCCATAGATAAAAGCTAGTA-TTTCAGCCTACC----ATTGAGTGTGCTTATAGCTCACCAAAAGGGCACTCTGTCTTGGGAATACAGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55766517 176 + 99891981 AGTTAAATTTCCTTTTA--------AAAAAATAACTGATATGATTCAATTTCACCGTAGATAAAAACTAATA-TTTCAGCCTACC----ATTGAGTGTACTTATAGCTAACCAAAAGGGCACTCTGTCTCGGGAATACAGATTTGCCTAGAGGTATCCTATCACAGTC-AAAGAAAAAGCAATGAGGGAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133466767 176 - 185818997 AGTTAAATTTCCA-TTA-------AAAAAAATCACTGATGTGATTCCATTTCGCCATAGATAAAAACTAATA-CTTCAACCTACC----ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCAGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296446 177 + 192294377 AGTTAAATTTCCATTTA-------AAAAAAATCACTGATGTGATTCCATTTCGCCATAGATAAAAACTAATA-CTTCAACCTACC----ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCAGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778361 177 + 3123512 AGTTAAATTTCCATTTA-------AAAAAAATCACTGATGTGATTCCATTTTGCCATAGATAAAAACTAATA-CTTCAACCTACC----ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCAGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498930 177 + 10077455 AGTTAAATTTCCATTTA-------AAAAAAATCACTGATATGATTCCATTTCGCCATAGATAAAAACTAATA-CTTCAACCTACC----CCTGAGTGTACTTATAGCTAACCCACAGGGCACTCTGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATAGCAGTC-AAAGAAAGAGCAATGAGGGAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5705000 178 + 127223203 AGTTAAATTTCCATTTT-------AAAAAAATCACTGATACGATTCCATTTCGCCATAGATAAAAAATAATA-CCTCAACCTACC----ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCTATCTCGGGAATACGGATTTGCCTAGAGGTATCCTATCGCAGTCAAAAGAAAGAGCAATGAGGGAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165210 177 - 1799296 AGTTAAATTTCCATTTA-------AAAAAAATCACTGATATGATTCCATGTCGCCATAGATAAAAACTAATA-CTTCAACCTACC----ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCTGTCTCAGGAATACGGATTTGCCTAGAGGTATCCTATAGCAGTC-AAAGAAAGAGCAATGAGGGAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747855 176 + 6934359 AGTTAAATTCCCATTTT--------AAAAAATCACTGATATGACTCCATTTCACCATAGATAAAAACTAGTA-TTTCAGCCTACC----ACTGAGTCTACTTACAGCTAACCCACAGGGCACTCTGTCTCGGGAATATGGATTTGTTTAGAGGTATCCTATCGCAGTC-AAAGAAAGAGCAATGAGGGAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108108177 178 - 128169293 AATTAAATTTCCATTTA--------AAAAAATCACTAATATGATTCCATTTCACCAT-AATAAAAACTAGTA-TTTCAGCCTACCC-TTAATGAGTGTACTCACAGCTAACCCAAAGGGCACTCTGTCTCTGGAATACAGACTTGCCTAGAGGTGTCCTATCACAGTC-AGAGAAAGAGCAATGAGAGAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 725538 166 - 18371965 AGTTAAATTTCCA-TTA--------AAAAAATCACTGATATGATTCCATTTCACCATAAATAAAAACTAACA-TTTCAGCCTACCC-TGAATG------------GCTAACCCAAAGGGCACTCTGTCTCTGGAATACAGACTTGCCTAGAGGTATCCTGTCATAGTC-AAAGAAAGAGCAACGAGAGAT i saiBol1.JH378145 C 0 I 322 s cebCap1.NW_016107540v1 1385391 179 + 3566421 AGTTAAATTTCCATTAA--------AAAAAATCACTGATATGATTCCATTACACCATAAATAAAAACTAATA-TTTCAGCCTACCC-TTAATGAGTGTACTCGTAGCTAACCCAAAGGGCGCTCTGTCTCTGGAATACAGACTTGCCTAGAGGTACCCTATCACAGTC-AAAGAAAGAGCAATGAGGGAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1887129 178 - 9267652 AATTAAATTTCCA-TTA--------AAAAAATCACTGATATGGTTCCATTTCACCATAAATAAAAACTAATA-TTTCAGTCTACCC-TTAATGAGTGTACTCATAGCTAACCCAAAGGGCACTCTGTCTCTGGAATACAAACTTGCCTAGCGGTATCCTATCACAGCC-AAAGAAAGAGCAATGAGGGAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12742280 168 + 14340318 GGTTAAATTTCCACTTAAAAAAAGAAAAAAATCACCAAAATTAT----TTTCCCCACCAACGAAC-CTCATA-TTTCAGCCTGCC--TTTATGAACATACT-----CTCCACCACAAGGCACTTTG-----GAGATACAGATTTGGTTAGGGGGATCTCATTATAGAC----CAAAGAGGAAGAAGGAAC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51759599 177 - 55844845 AGTTAAAATTCCATTTA---------AAAATTTAATAAAATGATT--GTTTTGCCATAGATAAAGCCAAATA-ATTCAGCCTATCT-TTAAGAAGAATACTCGTATGTAAAGCAAAGGGCACTTTGTCTCTGGGATGTAGATTTTGTTAAGCGTATCCAATGATAGCTGAAATGAAGAGGAATAAGGGCT i canFam3.chr18 I 14651 C 0 s dasNov3.JH578441 1190128 156 + 1446996 ---TAAAATTCCAT-----------AAAAATGTACTAAAATGATTC-ATTTTAACTTAGATACAACCAAATA-TTTCAGCCCACACTTTTGTCAGCATACT-ATAGTTGAACCAAAGGGGAAT---TCTCTGGG-TGTAGATTTAGATAAGAATATCAAATTATACCC-CAAAGAGGA------------ i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I a score=12132515.000000 s hg38.chrUn_KI270749v1 50888 1051 + 158759 AGAAAAGGTTAGTGATGGAGACACCAGCG--CTGCATTTTGCAAC--AAACAATGTAAAAATTTTACTGATTGGCTCTGCTAACTTACTACAGTTTGCATTCCTCTCAGGT----GGGAGAATTG-------TTGCG------TTTTTTCTTAAGATAGAAAAGCAATTCAGATAATCTGAAATCTCC---ACAAGAA-GGA-TAAGAAGCAC------AGCAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCAACT-GTCTGTGCTCCATAGAAACAATTGTCTGTACTGGAAGTCATATGAGATA----------------------------CAGACAACAGCCAGAACTCTGATCCTCTCATTAGTGATTTCAGAAGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAA-----CATTTGGCACTGA-AAGAGGTTAGACGGATAACCATTTGTATCACCATATTCATGAAGCTGGAATATTTTCCA-TTACTGGTATCACATCCGAATGGAAGATGTTAAAAAGTCTCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGGGAAATGAAATTATTAACACACCTGCGAGGTGGA----TGGAAGA-GAAAAAAAAGAATAATCAGCTGGAGTTCTTCTCCTTGATAAGACAAC-TCACT-AAAA-ACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGACGACTCAAGA-GTTTTTAAATTGCTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAATTATATTGCTTGTGTTTTAAGGCCCATAATGAGCAATTATATCACACATGATAGTTTCAGCAGTAAAATATTATCCATTAACTGCTGGAAATCATAAAAGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAACTACTATTCTGCAAATTTAAAAATAAAGTTTAAATGTTATTGGTCTTATTTAATAGGTCTGTAAAAAAA-----TGCGCTATTTGAAAAGTAGCTGCTACCTTAATTAATTCTTCATAT---------TAGACGGCTGGTTACAGTAATGCACAGTAAGGTGCTACATAGATATATTGCTAAATTTTCTGCA----CA-TACTATGTATTTG s panTro5.chr1 101896255 1052 - 228573443 AGAAAAGGTTAGTGATGGAGACACCAGCG--CTGCATTTTGCAAC--AAACAATGTAAAAACTTTACGGATTGGTTCTGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTG-------TTGCG------TTTTTCCTTAAGATAGAAAAGCAATTCAGATAATCTGAAATCTCC---ACAAGAA-GGA-TAAGAAGCAC------AGCAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCAACT-GTCTGTGCTCCATAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTA----------------------------CAGACCACAGCCAGACCTCTGATCCTCTCATTAGTGGTTTCAGAAGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGTATCACCATATTCATGAAGCTGGAATATGTTCCA-TTACTCGTATGACATCCGAATGGAAGATGTTGAAAGGTCTCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTATTAACACACCTGCGAGGTGGA----TGGAAGA-GAAAAAAAAGAATAATCAGCTTGAGTTCTTCTCCTTGATAAGACAAC-TCACT-AAAA-ACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCGACTGTAGA-GTTTTAAAATTGCTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAATTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGTTTCAGCAGTAAAATAT---CCATTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGACGGAATTTGCTAAAATAAACCATCTGCTGAAAACTACTATTCTGCAAATTTAAAAATAAAGTTTAAATGTTATTTGTCTTATTTAATAGGTCTGTGAAAAAA-----TGCGATATTTGAAAAGTAGGTGCTACCTTAATTAGTTCTTTATGT---------TAGAAGGCTGCTTACAGTAATGCACAGTAAGGTGCTACATAGATATATTGCTAA-TTTTCTGCA----CA-TACTATGTATTTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108515881 1052 - 162613886 ATAAAAGGTTAGTGATGGAGACACCAACC--CTGCATTTTACAAC--AAACAATGTAAAAGCTTTATGGATTGCTTCTGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTG-------TTGAG------TTTTTTCTTAAGATAGAAAAGCAATTCAGATAATCTGAAATCTCC---ACAAGAA-GGA-CAAGAAGCAC------AGCAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCAACT-GTCTCTGCTCCACAGAAAGAATTGTCTGCACTGGGAGTCATATGAGGTA----------------------------CAGACAACAGCCAAACCTCTGATCCTCTCATTTGTGATTTCAGAAGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGTATCACCGTATTCATGAAGCTGGAATATTTTCCA-TTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGTCGCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGA----TGGAAGA-GAAAAAAAAGAATAATCAGCTTGAGTTCTTCTCCTTGATAAGACAAC-TTACG-AAAA-ACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGACAACTCTAGA-TTTTTTAAACTGCTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTCTTTTAAGGCACATAATGAGCAA-TATATCACACATGATAGATTCAGCAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGAAGGAATTTGCTAAAATAAACCATCTGCTGAAAAATACTATTGTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTCTTATTTAATAGGTCTGTGAAAAAA--------GATATTTGAAAAGTAGGTGCTACCTTAATTAGTTCTTTATAT---------TAGACTGTTGGTTACAGTAATGCACAGTAAGGTGCCACATACAAATATTGCTAAATTTTCTGTA----TA-TATTATGTATTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 30616 1053 - 126596 AGAAAATGGTAGTGATGGAGACACCAGCG--CTGCATTTTGCAAC--AAACAATGTAAAAACTTTACAGATTGGTTCTGCTAACTTGCTACAGTTTACATTCCTCTCAGGT----GGGAGAATTG-------TTGCG------TTTTTTCTTAAGATAGAAAAGCAATTCAGATAATCTGAAATCTCC---ACAAGAA-GGA-TAAGAAGCAC------AGCAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCAACT-GTCTGTGCTCCATAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTA----------------------------CAGACAACAGCCAGACCTCTGATCCTGTCATTAGTGATTTCAGAA-AAATTACCAGTCAACTGAATAACTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGTATCACTATATTCATGAAGCTGGAATATTTTCCA-TTGCTGGTATCACATCCGAATGGAAGATGTTAAAATGTCTCTCA-CTTGTAGGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTACTAACACACCTGCGAGGTGCA----TGGAAGA-GAAAAAAAAGAATAATCAGCTTGAG-TCTTCTCCTTGATAAGACAAC-TCACT-AAAA-ACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGACGACTCTAGA-GATTTTAAATTGCTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAATTATATTGTTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGTTTCAGCAGTAAAATATTATCCGTTAACAGCTGGAACTCATGAAAGCATAGCACAATGTGAAGACGGAATTTGCTAAAATAAACCATCTGCTGAAAACTACTATTCTGCAAATTTAAAAATAAAGTTTAAATGTTATTTGTCTTATTTAATAGGTCTGTGAAAAAA----ATGCGATATTTGAAAAGTAGCTGCTATCTTAATTAATTCTTTATGT---------TAGACGGCTGGTTACAGTAATGCACAGTAAGGTGCTA-ATAGATATATTGCTAAATTTTCTGCA----TA-TACTATGTATTTG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55766693 1050 + 99891981 AGAAAAATTTAGTGATGGAGAAACCAAAG--CTGCATTTTACAAC--AAACAATGTAAAAACTTTACAGATTGCTTCTGCTAACTTACTGCAGTTTACATTCCTCTCAGGT----GGGAGAACTG-------TTGAG------TTTTTTCTTAAGATAGAAAAGCAATTCAGATAATCTGAAATCTCC---ACAAGAA-GGG-TAAGATGCAC------AGCAGAAACTATTCTAGGCAGGAAGTCAATT-------CT-GTCTATGCTCCATAGAAACAATTGTCTGCACTGGGAGTCATACGAGGTA----------------------------CAGACAACAGGCAGACCTCTGATCCTCTCATCTGTGATTTCAGAAGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTTGCACTGA-AAGAGGTTAGATGGATAACTATTTGTATCACCATATTCATGAAGCTGGAATATTTTCCA-TTACTGTTATCACATCTGAATGGAAGATGTTAAAAGATCTCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGA----TGGAAGA-GAAAAAAAAGAATAGTCAGCTTGAATTCTTCTCCTTGATAAGACAAC-TCACT-AAAA-ACC------TAAAGAGAAAAATAAAAGTTTAAAATAATTAACCAG-AAGAAGACAACTCTAGA-TTTTTTAAATTGCTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATTATGAGCAATTATATCACACATGATAGATTCAGCAGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGTAATTTGCTAAAATAAGCCATCTGCTGAAAAATATTATTCTGCAAATTTAAAAATAAAGTTTAAATGTTATTTGTCTTATTTAATAGGTCTGTGAAAAAA----ATGAGATATTTGAAATGTAGGTGCTACCTTAATTAGTTCTTTATAT---------TAGACAGTTGGTTACAGTAATGCACAGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTA----TA-TAATATGTATTTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133466943 1058 - 185818997 AGAAAAGGTTAGTGATGGAGACAGCAACA--CTGCATTTTACAAC--AAACAATGTAAGAACTTTACAGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTG-------TTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCT---ACAAGCA-GGA-TAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCTCCACAGAAACAATTGTCTGCATTGGGAGTCATATGAGGTA----------------------------CGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCA-CTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTGACACACCTGCAAGGTGGA----TGGAAGAGGAAAAAAAAGAATAATCAGCTTGAGTACTTCTTCTTGATAAGACAAC-TCACT-AAAA-ACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGA-TTTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATAT---------TAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTA----TA-TATTGTGTATTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296623 1058 + 192294377 AGAAAAGGTTAGTGATGGAGACAGCAACA--CTGCATTTTACAAC--AAACAATGTAAGAACTTTACAGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTG-------TTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCT---ACAAGCA-GGA-TAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTA----------------------------CGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCA-CTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTGACACACCTGCAAGGTGGA----TGGAAGAGGAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAAC-TCACT-AAAA-ACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGA-TTTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATAT---------TAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTA----TA-TATTGTGTATTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778538 1058 + 3123512 AGAAAAGGTTAGTGATGGAGACAGCAACA--CTGCATTTTACAAC--AAACAATGTAAGAACTTTACAGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTG-------TTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCT---ACAAGCA-GGA-TAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTA----------------------------CGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTATCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCA-CTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTGACACACCTGCAAGGTGGA----TGGAAGAGGAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAAC-TCACT-AAAA-ACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGA-TTTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTACATCACACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCCAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATAT---------TAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTA----TA-TATTGTGTATTTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2499107 1058 + 10077455 AGAAAAGGTTAGTGATGGAGACAGCAACA--CTGCATTTTACAAC--AAACAATGTAAGAACTTTACGGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTG-------TTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCT---ACAAGCA-GGA-TAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTA----------------------------CGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTGCAGACGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCA-CTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGA----TGGAAGAGGAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAAC-TCACT-AAAA-ACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGA-TTTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCGAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATAT---------TAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTA----TA-TATTGTGTATTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5705178 1058 + 127223203 AGAAGAGGTTAGTGATGGAGACAGCAACG--CTGCATTTTACAAC--AAACAATGTAAGAACTTTATGGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTG-------TTGAG-----TTTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCC---ACAAGCA-GGA-TAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCGCCATGGAAACAATTGTCTGCACTGGGAGTCGTATGAGGTA----------------------------CGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACAGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCA-CTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTTTAAGATGGATATGAAAGAATATTTTTTGAGAAATGAGATTATTAACACACCTGCAAGGTGGA----TGGAAGA-GAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAAC-TCACT-AAAA-ACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGA-TTTTTTTAATTGCCGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTACATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGTGGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAAATATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTCTTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATGT---------TAGACAGTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTACATTTTCTGTA----TA-TATTGTGTATTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165387 1058 - 1799296 AGAGAAGGTTAGTGATGGAGACAGCAACA--CTGCATTTTACAAC--AAACAATGTAAGAACTTTACGGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTG-------TTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCGCT---ACAAGCA-GGA-TAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTA----------------------------CGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCA-CTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGA----TGGAAGAGGAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAAC-TCACT-AAAA-ACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGA-TTTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCGAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAAATATTATTCTGCAAATTTAAAAGTAAAAGTAAAATGTTATTTGTCTTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATAT---------TAGACACCTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTA----TA-TATTGTGTATTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1748031 1051 + 6934359 AGAAAAGGTTAGTGATGGAGACTGCAACA--CTGCATTTTACAAC--AAACAGTGTAAGAACTTTACGGATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTG-------TTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGATAATCTGAAATCTCC---ACAAGCA-GAA-TAAGAAGCAC------AGTAGAAACTATTCAAGGCAGGAAGTTAATCCTTTTGA-----CTGTGCTCCATAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTA----------------------------CGGACAACAGCCAAACCTCTGATCCTCTCGTTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAAGTTAGACGGATAACTATTTGCCTCACCATATTCATGAAGCTGGAATATTTTCCA-CTACTGGTATCACATCTGAATGGAAGTTGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAGAGAATATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGA----TGGAAGA-GGAAAAAAAGAATAATCAGCTTGAGTTATTCTTCTTGATAAGACAAC-TCACT-AAAA-ACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAA--CTAGA-TTTTTTTAATTGCCGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCGGTGGTAAAATATTATCCGTTAACAGCTGGAACTCAAAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAAATATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTCTTATTTAATATGCCTGTGAAAAAA----ACGAAATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATAT---------TAGACAGTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATATTCTGTA----TA-TATTGTGTATTTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108108355 1033 - 128169293 AGAAAAAAGTAGTTGTGTAGACACCAGTG--CTGTGTTTTACAAC--AA----TGTAGGAACTTTACA-ATTCCTACAACTAACTTATTACATTTTACATTCCTCTCAGAT----GGGAGAATCA-------TTGAG------ATTTTGCTTAAGACAGAAAAGTAATTCAGATAAGCTGAGATCTCC---ACAAGCA-GGA-TAAGAAGCGC------AGCAGAAACCATTCTAGGCAGGAAGTCAATCCCTTCAACT-GTCTGTGCTCCATAGAAACAACTTCCTGCACTGGGAGTCATACGAGGTA----------------------------CAGACAACAGCCAAAGTTCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACTGAGTAATTCAT-TGAGTAAAGCAAACATTTGGCACTGA-AAGAGGGTAGACAGATAACTATTTGTATCACTATATTCATGAAGCTGGAATATTTTCCA-CTACTGGTATCACTTCTGAATGGAAGATCTTAAAAGGTCTCTCATCTTGTAAAATGGATAGAAAAGAACATTTTCTCAGAAATGAAATTATTAACACACCTGCAAG----C----TGGAGGA-GGAGAAAAAGAATAATCAGCTTGAG---CTCTTCTTGATAAGACCAC-TCACT-AAAA-ACA------TAAAGAGAAAAATACAATATTAAAATA-------AG-CAGAAGACAACTCTAGA-TTTTTTAAATTGCTGATAAGATTTTAATTTGCTCCAAGATGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGCAGTAAAATATTATTCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGAAATTTGCTAAAAT-AACCATCTGCTGAAAAATACTATTCTGCAAATTTAAAAATAGAGTTAAAACGTTATTTGCCTTATTTAACAGGTCTATGAAAAAC----ATGACATATTCGAAAAGTAGGTGCTACCTTAATCAGTTCCTTATAT---------TAGACAGTTGGTTATAATAATTCAC----AGGTGCTACATATAAATATTTCCAAATATTCTGTA----TA-TATTGTGTATTTG i calJac3.chr8 C 0 I 102 s saiBol1.JH378145 726026 1034 - 18371965 agaaaaAGGTAGTTGTGTAGACACCAATG--CTGCATTTTACAAC--AA----TGTAGGAACTTTACA-ATTCCCACAAC-AACTTACTACATTTTACATTCCGCTCAGAT----GGGAGAATCA-------TTGAG------ATTTTGCTTAAGACAGAAAAGTAATTCGGATAAGCTGAGATCTTC---ACAAGCA-GG------------------AGAAGAAACTATTCTAGGCAGGAAGTCAATCCCTTCCACT-GTCTATGCTCCACAGAAACAATTTCCTGCACTGGGAGTCATACGAGGTA----------------------------CAGACAACAGCCAAGCCCCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACTGAGTAATTCAT-TGAGTACAGCAAACATTTGGCACTGA-AAGAGGTTAGACAGATAACTATTTGTATCACTATGTTCATGAAGCTGGAATATTTTCCA-CTATTGGTATCACATCTGAATGGAAGATCTTAAAAGGTCTCTCAACTTGTAAAGTAGATAGGAAAGAACATTTTCTCAGAAATGAAATTATTAGCACACCTGCAAGGTGTA----TGGAGGA-GGAGAAAAAGAATAATCAGCTCGAG---CTCTTCTTGATAAGACTAC-TCACT-AAAA-GCA------TAAAGAGAAAAATACAAGATTAAAATAATTAAGCAG-AAGAAGACAACTCTAGA-TTTTTTTAATTGC---TAAGATTTTAATTTGCTCCAAGATGAAAATAACTATATTGCTTGTGTTTTAAGGCACACAATGAGCAATGATATCACACATGATAGATTCAGGAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAACGCATACCACAACGTGAAGATGAAATTTGCTAAAATAAACCATCTGCTGAAAAATACTATTCTGCAAATTTAAAGATAAAGTTAAAACGTTATTTGCCTTAGTTAACAGGTCTATGAAAAAA----AGGACATATTTGAAAAGTAGTTGCTACCTTAATTAGTTCTTTATAT---------TAGACAGTTGGTTATAGTAATTCACAGTAAGGTGCTACATATAAACACTGCCAAATTTTCTGTA----TA-TTTTGTGGATTTG i saiBol1.JH378145 I 322 I 87 s cebCap1.NW_016107540v1 1385570 1036 + 3566421 AGAAAAAGGTAGTTGTGTAGACACCAATG--CTGCATTTTACAAC--AA----TGTAGGAACTTCACA-ATTCCTACAACTAACTTATTGCATTTTACATTCCTCTCAAAT----GGGAGAATCA-------TTGAG------ATTTTGCTTAAGACAGAAAAGTCATTGAGATAAGCTGAGATCTCC---ACAAGCA-GGA-TAAGAAGCAC------AGCAGAAACTATTCTAGGCAGGAAGTCAATCCCGTTAACT-GTGTATGCTCCGTAGAAACAATTTCCTGCACTGGGAGTCATACGAGGTA----------------------------CAGACAACAGCCAAACCTCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACTGAGTAATTCAC-TGAGTAAAGCAAACATTTGGCATTGA-AAGAGGTTAGACAGATAACTATTTGTATCGCTATATTCATGAAGCTGGAATATTTTCCA-CTGCTGGTATCACATCTGAATGGAAGATCTTAAAAGGTCTCTCATCCTGTAAAATGGATAGGAAAGAACATTTTCTCAGAAATGAAATTATTAACACACCTGCAAGGTGTA----TGGAGGA-GGAGAAAAAGAATAATCAGCTTGAG---CTCTTCTTGATAAGACTAC-TCACT-AAaa-aca------taaagagaaaaatacaagattaaaataaTTAAGCAG-AAGAAGACAACTCTAGA-TTTTTTAAATTGCTGATAAGATTTCAATTTGCTCCAAGATGAAAATAACTCTATTGCTTGTGTTTTAAGGCATATAATGAGCAATGATATCCCACACGATAGATTCAGCAGTAAGATATTATCCGTTAACAGCTAGAACT--------CATACCACAATGTGAAGATGAAATTTGCTAAAATAAACCAGCTGCTGAAATATACTATTCTGCAAATTTAAAAATAAAGTTAAAATGTGATTTGCCTTATTTAACAGGTCTATGAAAAAA----ATGACATATTTGAAAAGTAGGTGCTAACTT----AGTTTTTTATAT---------TAGACAG-TGGTTACAGTAATTCACAGCAAGGTGCTACATATAAATACTGCCAAATTTTCTGTA----TA-TATTGTGTATTTG i cebCap1.NW_016107540v1 C 0 I 83 s aotNan1.NW_018514471v1 1887307 1044 - 9267652 AGAAAAAGGTAGTTGTGTCGACACCAATG--CTGCATTTTACAAA--AA----TGCAGGAAATTTACA-ATTCCTACTACTAACTTATTACATTTTACATTGCTCTCAGAT----GGGAGAATCA-------TTGAG------CTTTTGCTTAAGACAGAAAAGTAATTCAGATAAGCTGAGATCTCC---ACAAGCA-GGA-TAAGAAGCAC------AGCAGTAACTATTCTAGGCAGGAAGTCAATCCCTTCAACT-GTCCATGCTCCATAGAAACAATTTCCTGCACTGGGAGTCATACGAGGTA----------------------------CAGAAAACAGCCAAACCTCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACCGAGTAATTCAT-TGAATAAAGCAAACATTTGGCACTGA-AAGACGTTAGACAGATAACTATTTGTATCACTATATTCATGAAGCTGGAATATTTTCCA-CTACTGGTATCACATCTGAATGGAAGATCTTAAAAGGTCTCTTATCTTGTAAAATGGATAGGAAAGAACATTTTCTCAGAAATTAATTTATTAACACACCTACAAGGTGTA----TGGAGGA-GGAGAAAAAGAATAATCAGCTTGAG---CTCTTCTTGATAAGACTAC-TCACT-AAAA-ACA------T--AGAGAAAAATACAAGATTAAAATAATTA---AG-CAGAAGACAACTCTAGA-TTTTTTTAATTGCTGATAAGATTTTAATTTGCTCCAAGATGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCACACATGATAGATTCAGCAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGAAATTTGCTAAAATAAACCATCTGCTGAAAAATACTATTCTGCAAATTTAAAAATAAAGTTAAAACACTATTTGCCTTATTTAACAGGTCTATGAAAAAA----ATGACATATTTGAAAAGTAGGTGCTACCTTAATTAGTTCTTTATAT---------TAGACAGTTGGTTACAGTAATTCACAGTAAGGTGCTACATATAAATACTGCCAAATTTTCTGTA----TA-TATTGTGTATTTG i aotNan1.NW_018514471v1 C 0 I 149 s otoGar3.GL873564 12742448 982 + 14340318 AGAGAGGCCGAGCGGTGGGAATGCTGACA--C----------------------------ACATTGTGAATTGCTTCAACTTACTCATTACA-TTTATATTCCACTCAGGT----TGAAGACTTG-------TTGAA------TATTT--TTAAGAAAG-AGAGTGATGCAAATTTTTTGGGCTCTCC---ACACACA-AGA-TTA-AGACCC------AGAAGAAACTAGTCTGGGCGTGAAGTCAGTCCATTCAG-----CTGTGTCCCGTAGAAACCACCATCCATGCTGGGAGTCACACAGAGCA----------------------------CAGAC------------------TTGCTCTCTTGGAATTTCAGAAGAAAGTTTTAGTCAACTCAGTAATTCAC-TGAGAACACCAAATATTTAGCACTAATTCGGGGTTAGAGTGATAATCATTTCCACCACCATGTTCATGGAGTTGAAATATTTTCTA-CTACTGGTATCATAACCAAATAAAGGAACTTACAAGTCTTCTCATCTTCTAAGATGGATATGAGAGAACA---TCTCAGAAATGAAATTA---ACACACTTGCAAGGTATA----TGGA-GA-GAGACAAAAAGATAATCAGCTTGAATTTGTTCTCTT-----GACAAT-TCTCT-AAAA-AAAATTTTTTTCAGAGAAAAATGTAAGTTTAAAATAATTAGCCAGAAAGAAGACAAATGTAG---TTTTTAAAATGCTGATAAGATTTTAATTTGTTGCAAGTTGAAAATAACTATATTGCTGGTGTTTTACGGCACATAATGAGCAATTATATCACACGTGATAAATTC-GCAGTAAAATATTATCAATTAACAGTTGGAACTCATAAA-GCATAACATCATGTGAACATGGAA-TTGACAAGAAAGACCATCTGCTGAAAAATACTATTCTGTAAATTTAA------AGTTAAAATGTTATTTGCCTTATTTAATAGATCTGTGAAAATG----ATGAGATATTTTTAA-GTAAGTGTTACCTTAATTA-TTTACTACAT---------TTGACAGTTTGTTATAG-----CACAATAAGGGGCTCCATGTAAGTATTGCTAAATTTTCCATA----TA-GATCATATAGTTA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51759776 1070 - 55844845 ATAGAAGGTGAGTAGTGGAGACATCAAAATCCTGTATTGTAGAACTTAAACTTTACAGAAGCATTATGGATTCCTTCAACTAACTCG-TACATTTTATATTTCTATCAGCTTAGAAAGAGACTTG-------TTGAGGTGTTTGTTTTTCTTAAAACAGAAAAGTAATCCAGATTATCTGCGATCTGTCAGACAAGAGTGGA-CACAGAGCACTCTCTGGGCAGAAACTAGTCTAAACATGAAGTCAATGCTTTCAACTCTTCTGTGCTCCAAAGACACGATGGTCTACACTTGGAGT---------TA----------------------------CAGAAAATAGCCCAA------AGTCTACCATTTGGAATTTCAGAAAAAG--ACCAGTCAACTGAGTCATGCTCTTGAATACACCAAACATTTGCCAATAG-A----GCTTGAGAGAGATCCATTTGTTTCACAGTATCCATGAAGTTGGA--TTTTGCCA-CTACTGCTATTATATCT-ACTAGAAGAACTTAAAGGAT-TCTCAGCTGGTAAGCCAGATAGGAAAGATTATTTCCTCAGAAATGGAACTATTAACCCACCTGCAAATTGAAGGCGGGGTAGG-GAGGGGAAGCAATAATCAGCCTGAATTTTTAGTCTTCACAAAATAATAACATTAAAAA-ATA------TACAGAGAAAAACACAAGTTTAAAATAATTAACCAG-AAGAAGACAACTGTAGATTTTTTTAAAATGCTGATAAGATTTTAATTTGCTCGAAGTTGAAAATAACTATATTACTGGTGTTTTAAGGCCCATAATGAGCAATTATATCACACATCATAGATTCAGCAGTGAAATATTATCAGTTAACAGCTGGAACTCATAAAAGCATAGCACAGTGTGAACATGAAGTTTGTTAGAATAAACCATCTGCTGAAAAATAGTATTCTGCAAA-TTAAAAATAAAGTTAAAACATTATTTGCCTTATTTAATAGATTTGTGAAAAAAAATGATGAGATAAT-GAAAAGTAGGTGCTACTTTAATTAATTTCCTGTAT---------TACACAATTGGTTACAGTAGTGTACAGTGTGGAGCTGCATATAATTATTGCTAAATTCCTCATACATGTA-TATTGTGCAttca i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1190284 1060 + 1446996 ------AGATGGTTAGGGGAACACCAAAA---TGTTTTAGGTCAT--AAATTTTATAAGGGCATTATGGTTTGCTTCAACTAGCTCCTTGCATTTCACATTTCTTTCAGGT----AGGAAACTTAGGTTTGTTTTTT------TTTTTCCTCATGACAAGAAAATGATACACATTTTCTGAGACCTCC---ACAGATA-ACACCCATGAACAC------AACACTCGCT------------TGGTTCATCCATTCACCT-TTCTATGAGCCACAGACAAAGTTGCCCACACTTGGCCTATCATGAAGTAACACTCAATGATCACTGGAGCTACAGAGCAGAAAATAGCCTAAGACCAAATACTCTTATTTGGAATTTAAGTACAAG-TAACAATCAACTGAGAAATCCAT-TAAGTTCACCAGATG-TTAGCTCTAG-CA---------------------TATATCACAATATCTATGAAGGTAGACTATTTTGCAGCTATTTCTTTCACAGCTGAATAGAA-CTGAAAAAAATCTTCTCACCTTGTAAATCAGATAGGAAAAAACATTCCTC--AAAATGAACTTATC-TCACACCTGCAAGGTAAA----TGGAGAAATATCTAAAAGAATAATCAGCTTCAGTTCTTCCTCTTGACAATACAAC-TCACT-AAAATATA------TACAGAGCAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGACAACTGTAGA-TTTTTTAAA-TGCTGATAAGATTTTAATTTGCTCCAAGACAAAAATAACTATATTGTTGGTGTTTTAAGGCACATAATGAGCAATTATATTATGCATGATAGATTCAGTAGTGAAATATTATCAGTTAACAGCTGGAACTCATAAAAGCATAGCTCACTATGAACATGGGATTCGCTAGAATAAACCATCTGCTGAAAAATACTATTCCGCAAATTTAAAAATAAAGCTAAAATGTGATTTGCCTTATTTAATAGATCTTGGATAAAA--TGATGAGATGTT-GAAAAGTAGATGTGACCTCAATTAATTCCTTAAGTAGATAGTTATAGAAAATATTTTACTGTAATGTAAAATAAGGTAATGAATATTAATATTGCTAAATTTTCTATA----CATTCTTGCATATTTA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I a score=-4490.000000 s hg38.chrUn_KI270749v1 51939 3 + 158759 GCT-- s panTro5.chr1 101897307 3 - 228573443 GCT-- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108516933 3 - 162613886 GCT-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 31669 3 - 126596 GCT-- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55767743 3 + 99891981 GCT-- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468001 3 - 185818997 GCT-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67297681 3 + 192294377 GCT-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779596 3 + 3123512 GCT-- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500165 3 + 10077455 GCT-- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706236 3 + 127223203 GCT-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166445 3 - 1799296 GCT-- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1749082 3 + 6934359 GCT-- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109490 1 - 128169293 g---- i calJac3.chr8 I 102 C 0 s saiBol1.JH378145 727147 1 - 18371965 g---- i saiBol1.JH378145 I 87 C 0 s cebCap1.NW_016107540v1 1386689 1 + 3566421 T---- i cebCap1.NW_016107540v1 I 83 C 0 s otoGar3.GL873564 12743430 3 + 14340318 GCT-- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51760846 2 - 55844845 -gt-- i canFam3.chr18 C 0 I 1 s dasNov3.JH578441 1191344 3 + 1446996 --TCA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1888351 149 - 9267652 I a score=187050.000000 s hg38.chrUn_KI270749v1 51942 21 + 158759 TAAACTATTTG-----AAATTTTATA s panTro5.chr1 101897310 21 - 228573443 TAAATTATTTG-----AAATTTTATA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108516936 21 - 162613886 TAAATTATTTG-----TAATTTTATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 31672 20 - 126596 TAAA-TATTTT-----AAATTTTATA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55767746 21 + 99891981 TAAATTATTTG-----AAATTTTATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468004 19 - 185818997 TAAATTATTTG-----AAATTTTA-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67297684 19 + 192294377 TAAATTATTTG-----AAATTTTA-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779599 19 + 3123512 TAAATTATTTG-----AAATTTTA-- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500168 19 + 10077455 TAAATTATTTG-----AAATTTTA-- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706239 19 + 127223203 TAAATTATTTG-----AAATTTTA-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166448 19 - 1799296 TAAATTATTTG-----AAATTTTA-- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1749085 21 + 6934359 TAAATTATTTG-----AAATTTTATA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109491 19 - 128169293 taaa--atttg-----aaattttata i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727148 21 - 18371965 taaattatttG-----GAATTTTATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1386690 21 + 3566421 TAAATTATTTG-----AAATTTGATA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1888500 21 - 9267652 TAAATTATTTG-----AAATTGTATA i aotNan1.NW_018514471v1 I 149 C 0 s otoGar3.GL873564 12743433 17 + 14340318 --TGTTATTTG-----AAATTTCA-- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51760849 26 - 55844845 taaattatttgaagataaatttcata i canFam3.chr18 I 1 C 0 s dasNov3.JH578441 1191347 21 + 1446996 TAAGTTACTAC-----AGACTTTCTA i dasNov3.JH578441 C 0 I 1605 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I a score=1178844.000000 s hg38.chrUn_KI270749v1 51963 115 + 158759 GTTAAAATAACAAATGTATATTTCAATGTTTTGACACAATTTGCAAATATACCTTTAAAG-----------AGCGTCTTACACTCTAAATAT---TATTTGTCACCTACATATTTGTCTTTTCTCTATA s panTro5.chr1 101897331 115 - 228573443 GTTAAGGTAACAAATGTATACTTAAATGTTTTGACACAAACTGCAAATATACCTTTAAAA-----------AGCGTCTTACACTCTAAATAT---TATTTGTCACCTATATATTTGTCTTTTCTCTATa i panTro5.chr1 C 0 C 0 s panPan2.chr7 108516957 118 - 162613886 GTTAAAGTAACTAATATATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAATA-------TTGTCACATATATATTTGTCTTTTCTCTATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 31692 115 - 126596 GTTAAAATAAGAAATGTATATTTAAATGTCTTGACACAAATTGCAAATATACCTTTAAAA-----------AGTGTCTTACACTCTAAATAT---TATTTGTCACCTACATATTTGTCTTTTCTCTGTA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55767767 118 + 99891981 CTTAAAGTAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAATA-------TTGTCACATATATATTTGTCTTTTCTCTATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468023 120 - 185818997 --TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTAT---TATTTGTCATATATAAATTTGTCTTTTCTCTACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67297703 120 + 192294377 --TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTAT---TATTTGTCATATATAAATTTGTCTTTTCTCTACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779618 120 + 3123512 --TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTAT---TATTTGTCATATATAAATTTGTCTTTTCTCTACA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500187 120 + 10077455 --TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTAT---TATTTGTCATATATAAATTTGTCTTTTCTCTACA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706258 120 + 127223203 --TAAAGTAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTAT---TATTTGTCATATATATATTTGTCTTTTCTCTACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166467 120 - 1799296 --TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAATAT---TATTTGTCATATATAAATTTGTCTTTTCTCTACA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1749106 122 + 6934359 GTTAAAGTAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATACACCTTTAAAAAG----CTTTCAGCGACTTACACTCTAAGTAT---TATTTGTTATATATATATTTGTCTTTTCTCTACA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109510 122 - 128169293 gttaaagtaacaaatgtatatttaaattttttGACATGAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTAAATAT---TATTTGTCATATATACATTTGTCTTTTCTCTATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727169 121 - 18371965 GTTAAAGTAACAAAT-TACATTTAAGTCTTTTGACATAAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTAAATAT---TATTTGTCATATATATATTTGTCTTTTCTAGATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1386711 119 + 3566421 GTTAAAGTAACAAAT-TATATTTACATTTTTTGACATAAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTGAATAT---TATTTGTCATATAT--ATTTGTCTTTTCCGTATA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1888521 122 - 9267652 GTTAAAGTAACAAATGTATATTTAAATTTTTTGACATAAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTAAATAT---TATTTGTCATATACATATTTGTCTTTTCTCTATA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12743450 121 + 14340318 --TA---CAATAAATGCATATTTAGATTGCTTGATGCAAATTGTGAATCTACTATTATAAAGCTTTCTTTCAGTAACTTGTATTCTGAACAA---AATTACTTATAGATATATTTGTTTTTACTCTGGA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51760875 123 - 55844845 gttaaggaaataaatgcatattcaaagtttttactacatattgcaaatatagctgtataaag----gtttcaacagtttacattctaggcagaaatattaatcccacat--gtctgtcttctctctata i canFam3.chr18 C 0 I 193 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=373532.000000 s hg38.chrUn_KI270749v1 52078 38 + 158759 GGAAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTT s panTro5.chr1 101897446 38 - 228573443 ggaaagtttccatttttcccttgaagctttaattattt i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517075 38 - 162613886 GGAAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 31807 37 - 126596 -GAAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55767885 38 + 99891981 GGAAAGTTTAAAGTTTTCCCTTGAAGTTTTAATTATTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468143 38 - 185818997 GGAAACTTTCAATTTTTCCCTTAAAACTTCAATTATTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67297823 38 + 192294377 GGAAACTTTCAATTTTTCCCTTAAAACTTCAATTATTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779738 38 + 3123512 GGAAACTTTCAATTTTTCCCTTAAAACTTCAATTATTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500307 38 + 10077455 GGAAACTTTCAATTTTTCCCTTGAAACTTCAATTATTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706378 38 + 127223203 GGAAACTTTCAATTTTTCCCTTGAAACTTCAATTGTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166587 38 - 1799296 GGAAACTTTCAGTTTTTCCCTTAAAACTTCAATTATTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1749228 38 + 6934359 AGAAACTTTCAATTTTTCCCTTGAAACTTCAATTATTT i colAng1.NW_012115910v1 C 0 I 993 s calJac3.chr8 108109632 38 - 128169293 GGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727290 38 - 18371965 GGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1386830 38 + 3566421 GGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1888643 38 - 9267652 GGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATTT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12743571 37 + 14340318 GGTAAGTTTAAA-TTTTCCCCCATAGTTTTGATAATTT i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=150309.000000 s hg38.chrUn_KI270749v1 52116 17 + 158759 CAGTCTAT----AAAACAAAC s panTro5.chr1 101897484 17 - 228573443 gagtctat----aaaataaac i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517113 17 - 162613886 GAGTCTAt----aaaacaaac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 31844 17 - 126596 GAGTCTAT----AAAACAAAC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55767923 17 + 99891981 GAGTCTAt----aaaacaaac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468181 17 - 185818997 GAATCTAT----AAAACAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67297861 17 + 192294377 GAATCTAT----AAAACAAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779776 17 + 3123512 GAATCTAT----AAAACAAAC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500345 17 + 10077455 GAATCTAT----AAAACAAAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706416 17 + 127223203 GAATCTGT----AAAACAAAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166625 17 - 1799296 GAATCTAT----AAAACAAAC i manLeu1.NW_012105809v1 C 0 C 0 s calJac3.chr8 108109670 17 - 128169293 GCGTTTAT----AAAACAAAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727328 17 - 18371965 CAGTTTAT----AAAACAAAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1386868 17 + 3566421 GAGTCTAT----AAAACAAAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1888681 17 - 9267652 GAGTCTAT----AAAACAAAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12743608 21 + 14340318 GAGTTTGTTTGAAAAAAAAAT i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I e colAng1.NW_012115910v1 1749266 993 + 6934359 I a score=326124.000000 s hg38.chrUn_KI270749v1 52133 37 + 158759 TGATAATGTACAAATTAACAGAAAA-----AAGGTTTACAGA s panTro5.chr1 101897501 39 - 228573443 tgataatgtacaaattaacaggaaata---aaggtttacaga i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517130 39 - 162613886 tggtaatgtacaaattaacaggaaaaa---aaggtttacaga i panPan2.chr7 C 0 I 6 s gorGor5.CYUI01000522v1 31861 39 - 126596 TGATAATGTACAAATTAACAGGAAAAA---TAGGTTTACAGA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55767940 39 + 99891981 tgataatgtacaaattaacaggaaaaa---aaggtttacaga i nomLeu3.chr17 C 0 I 6 s rheMac8.chr3 133468198 38 - 185818997 TGATAATGTACAAATTCACAGAAAA-A---AAGGCTTACAGA i rheMac8.chr3 C 0 I 3 s macFas5.chr3 67297878 38 + 192294377 TGATAATGTACAAATTCACAGAAAA-A---AAGGCTTACAGA i macFas5.chr3 C 0 I 3 s macNem1.NW_012011522v1 2779793 38 + 3123512 TGATAATGTACAAATTCACAGAAAA-A---AAGGCTTACAGA i macNem1.NW_012011522v1 C 0 I 3 s cerAty1.NW_012000909v1 2500362 38 + 10077455 TGATAATGTACAAATTCACAGAAAA-A---AAGGCTTATAGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706433 38 + 127223203 TGATAATGTACACATTCACAGAAAA-A---AAGGCTTACAGA i chlSab2.chr21 C 0 I 3 s manLeu1.NW_012105809v1 1166642 38 - 1799296 TGATAATGTACAAATTCACAGAAAA-A---AAGGCTTACAGA i manLeu1.NW_012105809v1 C 0 I 3 s colAng1.NW_012115910v1 1750259 38 + 6934359 TGATAATGTACAATTTCACAGAAAA-A---AAGACTTACAGA i colAng1.NW_012115910v1 I 993 I 3 s calJac3.chr8 108109687 38 - 128169293 TGATAATGTACAAATTAATATGTGA-A---AAGGCTTACAGA i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 727345 38 - 18371965 TGATAATGCAAAAATCAATATGTGA-A---AAGGCTTAGAGA i saiBol1.JH378145 C 0 I 6 s cebCap1.NW_016107540v1 1386885 38 + 3566421 TGATAACGTACAAATTAATATGTGA-A---AAGCCTTACAGA i cebCap1.NW_016107540v1 C 0 I 6 s aotNan1.NW_018514471v1 1888698 38 - 9267652 TGATAATGTACAAATTAATATGTGA-A---AAGGCTTCCAGA i aotNan1.NW_018514471v1 C 0 I 3 s otoGar3.GL873564 12743629 41 + 14340318 TAGTAATACACAGATTAATTGGAAA-AAGCAGGGCTTACAAA i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66728662 7598 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=27575.000000 s hg38.chrUn_KI270749v1 52170 3 + 158759 TAT s panTro5.chr1 101897540 3 - 228573443 tat i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517175 3 - 162613886 tat i panPan2.chr7 I 6 C 0 s gorGor5.CYUI01000522v1 31900 3 - 126596 TAT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66736260 3 - 72422247 tat i ponAbe2.chrUn I 7598 I 636 s nomLeu3.chr17 55767985 3 + 99891981 tat i nomLeu3.chr17 I 6 C 0 s rheMac8.chr3 133468239 3 - 185818997 TAT i rheMac8.chr3 I 3 C 0 s macFas5.chr3 67297919 3 + 192294377 TAT i macFas5.chr3 I 3 C 0 s macNem1.NW_012011522v1 2779834 3 + 3123512 TAT i macNem1.NW_012011522v1 I 3 C 0 s cerAty1.NW_012000909v1 2500400 3 + 10077455 TAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706474 3 + 127223203 TAT i chlSab2.chr21 I 3 C 0 s manLeu1.NW_012105809v1 1166683 3 - 1799296 TAT i manLeu1.NW_012105809v1 I 3 C 0 s colAng1.NW_012115910v1 1750300 3 + 6934359 TAT i colAng1.NW_012115910v1 I 3 C 0 s calJac3.chr8 108109728 3 - 128169293 TAT i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 727389 3 - 18371965 TAT i saiBol1.JH378145 I 6 C 0 s cebCap1.NW_016107540v1 1386929 3 + 3566421 TAT i cebCap1.NW_016107540v1 I 6 C 0 s aotNan1.NW_018514471v1 1888739 3 - 9267652 TAG i aotNan1.NW_018514471v1 I 3 C 0 s otoGar3.GL873564 12743670 1 + 14340318 T-- i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=669280.000000 s hg38.chrUn_KI270749v1 52173 81 + 158759 GTGCACAAGTATGCACTTGCAGTTtacataatatataaaa----------------------------------------------------------------------------------------------atataactatacaaatatttgtatattataaatagatatac s panTro5.chr1 101897543 80 - 228573443 gtgcacaagtatgcacttggagtttacataatatatataa-----------------------------------------------------------------------------------------------tatatctatacaaatatttgtatattataaacagatataa i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517178 175 - 162613886 gtgcacaagtatgcacttggagtttacataatatatataaACatatacacaaatatatacaaatatttgtatatataaatatatatacaaatatatgtatattataaatatatatacaaatatgtgtatattataaatatatatacaaatatttgtatattataaatatatatac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 31903 80 - 126596 GTGCACAAGTATGCACTTGGAGTTtacataatataatgaa-----------------------------------------------------------------------------------------------tatatctatacaaatatttgtatattataaagagatatac i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55767988 91 + 99891981 gtgcacaagtatgcacttggagtttacatagtatatataaacatatataca------------------------------------------------------------------------------------caaatatatacaaatatttgtatattataaatatatatac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468242 91 - 185818997 GTGCACCAGTATGCACTTGGAGTTtacataatatatataaatatatataca------------------------------------------------------------------------------------caaatatatacaaatatttgtatattataaacatatatac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67297922 91 + 192294377 GTGCACCAGTATGCACTTGGAGTTtacataatatatataaatatatataca------------------------------------------------------------------------------------caaatatatacaaatatttgtatattataaacatatatac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779837 91 + 3123512 GTGCACCAGTATGCACTTGGAGTTtacataatatatataaatatatataca------------------------------------------------------------------------------------caaatatatacaaatatttgtatattataaacatatatac i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500403 91 + 10077455 GTGCACAAGTATGCACTTGGAGTTtacataatatatataaatatatataca------------------------------------------------------------------------------------caaatatatacaaatatttgtatattataaacatatatac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706477 91 + 127223203 GTGCACAAGTATGCACTTGGAatttacataatatataaaaatatatatccg------------------------------------------------------------------------------------caaatatatacaaatatttgtatattataaacatatatac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166686 91 - 1799296 GTGCACCAGTATGCACTTGGAGTTtacataatatatataaatctatataca------------------------------------------------------------------------------------caaatatataccaatatttgtatattataaacatatatac i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750303 91 + 6934359 GTGCACAAGTATGCACTTGGTGTTtacataatatatataaatatatatacg------------------------------------------------------------------------------------caaatatatacaaatatttgtatattataaacatatatac i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109731 91 - 128169293 GTGCACACGTATGCACTTGGAGTTTACAAAatatatatgaatatacataca------------------------------------------------------------------------------------caaatatatacaaatatttctatactgtaaatatatatgt i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 727392 90 - 18371965 GTGCACACATATGCACTTGGAGTTTACACAatatatatgaatata-ataca------------------------------------------------------------------------------------caaatatatacaaatatgtctatactgtatatatatataC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1386932 91 + 3566421 GTGCACACATATGCACTTAGAGTTTACACAatatatatgaatatatataca------------------------------------------------------------------------------------caaatatatacaaatatttctatactgtaaatatatatat i cebCap1.NW_016107540v1 C 0 I 4 s aotNan1.NW_018514471v1 1888742 91 - 9267652 GTGCACACATATGCACTTGGAGTTTACACAatataaatgaatatatataga------------------------------------------------------------------------------------caaatatatataaatatttctatactgtaaatatatatat i aotNan1.NW_018514471v1 C 0 I 2 s otoGar3.GL873564 12743671 18 + 14340318 -----------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTATGTGTTCATAT-- i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66736263 636 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=1031194.000000 s hg38.chrUn_KI270749v1 52254 156 + 158759 aaatatatgctat--atatataAAAACTCCAGGAAAGGCAAGGTAGTCAACACGCCtatgctgtcttgaggttacagaaaacacagagctgtaggttggtaaatcaggctttgcggaagacaggtgatgacaaggaagaaagaggagcctgacagcag s panTro5.chr1 101897623 156 - 228573443 aaatatatactat--atatataAAAATTCCGGGAAAGGCAAGGTAGTCAACACGCCtatgctgtcttgaggttacagaaaacacagagctgtaggttggtaaatcaggctttgcggaagacaggtgacgacaaggaagaaagaggagcctggcagcag i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517353 158 - 162613886 aaatatatactataaatatatataAACTCCAGGAAAGGCAAGGTAGTTAACATGTCtatgctgtcttgaggttacagaaaacacacagctgtatgttggtaaatcaggctttgcggaagacaggtgacgatgaggaagaaagaggagcctggcagcag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 31983 154 - 126596 aaatatatactct--ttatataAAAACTCCAGGAAAGGCAAGGTAGTCAACACGCCtatgctgtcttgaggttacagaaaacacagagctgtaggttggtaaatca-gctttgc-taagacaggtgacgacaaggaagaaagaggatcctggcagcag i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768079 154 + 99891981 aaatatatactat--atgtatataAACTTCAGGAAAGGCCAGGTAGTTAACACGTCtatgctgtcttgaggttacagaaaacacagagctgtatgttgataaatcaggctttgtggaagacaagtgacgaggaggaag--agaggagcctggcagcag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468333 151 - 185818997 aa-tatatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaa--acagagctgtatgttggtaaatcagactttgcggaagacagctgattatgaggaaggaaaaggaacctgcaagcag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298013 152 + 192294377 aagtatatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCTAGCCTGTTTTGAGGTTACAGaaa--acagagctgtatgttggtaaatcagactttgcggaagacagctgattatgaggaaggaaaaggaacctgcaagcag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779928 152 + 3123512 aagtatatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaa--acagagctgtatgttggtaaatcagactttgcagaagacagctgattatgaggaaggaaaaggaacctgcaagcag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500494 154 + 10077455 aagtctatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgccgttttgaggttacagaaaacacagagctgtatgttggtaaatcagactttgcggaagacaggtgattatgaggaaggaaaaggaacctgcaagcag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706568 154 + 127223203 aagtatatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaaacacagagctgtatgttggtaaatcagactttgcggaagacaggtgattaggaggaaggaaaaggaacctgcaagcag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166777 154 - 1799296 aagtatatactat--atatct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaaacacagagctctatgttggtaaatcagactttgcggaagacaggtgattatgaggaaggaaaaggaatctgcaagcag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750394 153 + 6934359 aaatatatactat--atatat--aAACTTCAGGAAAGGCAAGGTAGTTGACACATCTATGCTATTTTGAGGTTTCAGAAAACACAGAGCTGGatgttggtaaatcagactttgtggaagacaggtgattatgaggaaggaaaaggaa-ctgcaagcag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109824 140 - 128169293 aaatatatactat--atatTA--AAGCTCCAGGAAAGGCAACATAGTTAACACTTCCACGCTG--TTGAGGTTAGAGAAAACACAGAGCTGtatgttggcaaatgagg------------caggtgacagtgaggaaggaagaggaggctggcagcag i calJac3.chr8 I 2 C 0 s cebCap1.NW_016107540v1 1387027 142 + 3566421 aaatatatactat--atataA--AAACTCCAGGAAAGGCAAGATAGTTAACActtctatgctgtcttgaggttagagaaaacacagagctgtatgttggtaaatcagg------------caggtgacggtaaggaaggaagaggaggctggcagcag i cebCap1.NW_016107540v1 I 4 C 0 s aotNan1.NW_018514471v1 1888835 142 - 9267652 aaatatatactat--atataA--AAACTCCAGGAAAGGCAAGATAATTAACActtctatgctgtcttgaggttagagaaaacatagagctgtatgttggtaaatcagg------------caggtgatggtaaggaaggaagaggaggctggcagcag i aotNan1.NW_018514471v1 I 2 C 0 s otoGar3.GL873564 12743689 20 + 14340318 ----------------------------------------------------------------------------------------------GTTgg-agatctggct-------------------------------------------agcaa i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66736263 636 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I e saiBol1.JH378145 727482 0 - 18371965 C a score=2678731.000000 s hg38.chrUn_KI270749v1 52410 271 + 158759 aggtggt----cttgttacatggatgaaacctcacagggagcagccctcctcttgggaagtatagataggaattggt--ttttagaaatgtaaacgtgccaggctc--agttaatctttcctaaacccagacaagggagtatctcagggaaagcctgtctacatcaatgcagattttctctacaaatgcaaatct-ccccaacaaacacagcttttcagctattcttgtagaagaagctatctccagtcttccgagtagccatcttgaaatatgtcaaaa s panTro5.chr1 101897779 271 - 228573443 aggtggt----cttgttacatagatgaaacctcacagggagcagccctcctcttgggaagtataaatacgaaatggt--ttttagaaatgtaaacgtgccagactc--agttaatctttcctaaacccagacaagggagtatctcaaggaaagcctgtctatatcaatgcatattttctctacaaatacaaatct-ccccaacaaacacagcttttcagctatttttgtagaagaagctatctccagtcttccgagtagccatcttgaaatatgtcaaaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517511 271 - 162613886 aggtggt----cttgttatgtggatgaaatctcacagggagcagccctcctcttgggaagaatagataggaaatggt--ttttagaactttaaaagtgccagactc--agttaatctttcctaaacccagacaagggagtgtctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaatgaacacagcttttcagctattcttgtagaagaagctatttccagtcttccgagtaaccaccttgaaatatgtcaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32137 269 - 126596 aggtggt----cttgttacatggatgaaacctcaca-ggagcag-cctcctcttgggaagtatagataggaaatggt--ttttagaaatgtaaacgtgccaggctc--agttaatctttcctaaacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaacacagcttttcagctattcttgtagaagaagctatctccagtcttccgagtagccatcgtgaaatatgtcaaaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768233 268 + 99891981 aggtggt----cttgttacgtggatgaaacctcccagggagcagccctcctcttgggaagaatagataggaaatggt--ttttagaactttaaacatgccagactc--agttaatctttcctaaacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatccaaatct-ctccaacaaacacggcttttcagctattcttgt---agaagctatttccagtcttccgagtagccatcttgaaatatgccaaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468484 272 - 185818997 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctccccttgggaagaatagatagcaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatgttgaaatatgtcaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298165 272 + 192294377 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctccccttgggaagaatagatagcaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatcttgaaatatgtcaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780080 272 + 3123512 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctctccttgggaagaataggtagcaaatgat--ttttagaactttaaacgtgtcagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatcttgaaatatgtcaaaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500648 272 + 10077455 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctccccttgggaagaatagataggaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcttagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgaggagccatcttgaaatatgtcaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706722 272 + 127223203 aggtggt----cttgttatgtggatgaaacttcacagggagcagccctccccttgggaagaataggtaggagatggt--ttttagacctttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgtagattttctctacaaatgcaaatct-ccccaacaaagctaggttttcagctgttcttgtagaagaagctatttcctgtcttccgagtagccatcttgaaatatgtcaaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166931 272 - 1799296 aggtggt----cttgttatgtggatgaaacttcacagggagcagctctccccttgggaagaatagataggaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcactgcagattttctctacaaatgcaaatct-ccccaacaaagctagattttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatcttgagatatgtcaaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750547 272 + 6934359 aggtggt----cttgttacgtggatggaacttcacagggagcagccctccccttgggaagaatacataggagatggt--ttttagacctttaaacgtgccagactc-aagttaatctttcctagacccaaacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctattccctgtcttccgagtagccatcttgaaatatgtcaaaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109964 270 - 128169293 aggtggt----cttgttatgtgtatgaagcctcacagagagcagcccaccccttgggaagaatagatgggaaatggt--ttttagacctttataggtgccaaactc--agttaatcttccctagacacagacaaaggagtatctcagggaaagcctgtctataacaatgcagattttctctacaaatgcaaatct-ccccaacaaagacagcttttcagctacacttgtagaagaagctgttt-cggtcttgtgagtagccatcttgaaatatgtcaaat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727482 268 - 18371965 agggggt----cttgccatgtgtatgaagcctcacagggagcagccctccccttggaaagaatagatgggaaatgg---ttttagacctttaaaggtgccaaactc--agttaatctttcctagacccagataagggagtatctcaggcaaagcctgtctttatcaaaacagattttc-ctgcaaatgcaaatct-cgccaacaaagacagcttttcagctactcttgtggaagaagctgttt-ctgtcctctgagtagccatcttgaaacatgtcaaaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387169 270 + 3566421 aagtggt----cttgttatgtgtatgaagcctcacagggagcagccctccccttgggaagaacagatggaaaacggt--ttttagacctttaaaggtgccaaactc--agttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaagacagcttttcatcttctcttgtagaagaagctgttt-tggtcttctgtgtagccatcttgaaatatgtcaaaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1888977 269 - 9267652 agatggt----cttgttatgtgtatgaagcctcacagggagcagccctcccctt-gaaagaacagatgggaagtggt--ttttagacctttaaatgtgccaaactc--ggttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaagacagcatttcagctactcttgtagaagaagctgttt-gggtcatctgagtagccatcttgaaatacgtcaaaa i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12743709 261 + 14340318 aggtggttggccttgttatatggatgaaacctcgtagtcgg-agccctc------ggagtgcaggacggcacctgctcctgtcagacctttaaaggtgtcagactctcagctattctttcccacaacaagac-aggaagtgtctcagagaaagcctggctacatcaatgaagaatttctc-acagatacaaacctgccctataaaagacagctttccagctgttctagg----------attgccagcgctctgaatagccaccttgaaatatgtcaaaa i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66736263 636 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=17118.000000 s hg38.chrUn_KI270749v1 52681 2 + 158759 ag s panTro5.chr1 101898050 2 - 228573443 ag i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517782 2 - 162613886 ag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32406 2 - 126596 ag i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768501 2 + 99891981 ag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468756 2 - 185818997 ag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298437 2 + 192294377 ag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780352 2 + 3123512 ag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500920 2 + 10077455 ag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706994 2 + 127223203 ag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167203 2 - 1799296 ag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750819 2 + 6934359 ag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110234 2 - 128169293 gg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727750 2 - 18371965 gg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387439 2 + 3566421 gg i cebCap1.NW_016107540v1 C 0 I 14 s aotNan1.NW_018514471v1 1889246 2 - 9267652 gg i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66736263 636 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12743970 0 + 14340318 C e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=72472.000000 s hg38.chrUn_KI270749v1 52683 13 + 158759 ctgcccaggtgca s panTro5.chr1 101898052 13 - 228573443 ctggccaggtgca i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517784 13 - 162613886 ttggccaggtgca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32408 13 - 126596 ctggccaggcgca i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768503 13 + 99891981 ttggccatgtgca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468758 13 - 185818997 ttggccccgtgca i rheMac8.chr3 C 0 I 8 s macFas5.chr3 67298439 13 + 192294377 ttggccccgtgca i macFas5.chr3 C 0 I 8 s macNem1.NW_012011522v1 2780354 13 + 3123512 ttggccccgtgca i macNem1.NW_012011522v1 C 0 I 8 s cerAty1.NW_012000909v1 2500922 13 + 10077455 ttggctccgtgca i cerAty1.NW_012000909v1 C 0 I 8 s chlSab2.chr21 5706996 13 + 127223203 ttggccccgtgca i chlSab2.chr21 C 0 I 8 s manLeu1.NW_012105809v1 1167205 13 - 1799296 ttggcgcagtgca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750821 13 + 6934359 ttggccccgtaca i colAng1.NW_012115910v1 C 0 I 8 s calJac3.chr8 108110236 13 - 128169293 tgtgccgagtgca i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 727752 13 - 18371965 tgtgccgggtgca i saiBol1.JH378145 C 0 I 2 s aotNan1.NW_018514471v1 1889248 13 - 9267652 tgtgcctggtgca i aotNan1.NW_018514471v1 C 0 I 2 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66736263 636 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12743970 0 + 14340318 C e cebCap1.NW_016107540v1 1387441 14 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=973318.000000 s hg38.chrUn_KI270749v1 52696 107 + 158759 tgcctgtaatcccagcactctgggaggctgaag------tgggtagatcacctgaagtcaggagttggagaccagcctgaccaacatggtgaaacaccgtctctactaaatac s panTro5.chr1 101898065 107 - 228573443 cgcctgtaatcccaacactttgggaggctgaag------tgggtagatcacttgaagtcaggagttggagaccagcctgacctacatggtgaaaccccgtctctactaaatac i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517797 107 - 162613886 ggcctgtaatctcagcactttgggaggctgaaa------tgggtagatcacctgaggtcaggagttcgaggccagcctgacaaacatggtgaaaccccgtctctgctaaatac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32421 107 - 126596 tgcctgtaatcccagcactttgggaggctgaag------tgggtagatcacctgaagtcaggagttggagaccagcctgacctacatggtgaaaccccgtctctactaaatac i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768516 107 + 99891981 cgcctgtaatcccagcactttgggaggctgaag------tgggtagatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctctactaaatac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468779 107 - 185818997 cccctgtaatcccagcaccttgggaggctgagg------tgggtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatac i rheMac8.chr3 I 8 C 0 s macFas5.chr3 67298460 107 + 192294377 cccctgtaatcccagcaccttgggaggctgagg------tgggtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatac i macFas5.chr3 I 8 C 0 s macNem1.NW_012011522v1 2780375 107 + 3123512 cccctgtaatcccagcaccttgggaggctgagg------tgagtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatac i macNem1.NW_012011522v1 I 8 C 0 s cerAty1.NW_012000909v1 2500943 107 + 10077455 cccctgtaatcccagcaccttgggaggctgagg------tgggtggatcaccagaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatac i cerAty1.NW_012000909v1 I 8 C 0 s chlSab2.chr21 5707017 107 + 127223203 cccctgtaatcccagcactttggaaggctgagg------tgggtggatcacctgaggtcaggagtttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatac i chlSab2.chr21 I 8 C 0 s manLeu1.NW_012105809v1 1167218 105 - 1799296 --cgtgtaatcccagcaccttgggaggctgagg------tgggtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatac i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750842 107 + 6934359 cccctgtaatcccagcacttggggaggctgagg------tgggtggatcatctgaggtaaggagtttgagatcagcctgaccaacatgatgaaaccccgtctccactaaatac i colAng1.NW_012115910v1 I 8 C 0 s calJac3.chr8 108110251 113 - 128169293 ggtctgtaatcccagcactttgggaggcagaggccgagatgggtggatctcctgaggtcaggggttggagatctgcactaccaacatagtaaaaccctgcctctactaaatac i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 727767 113 - 18371965 agcctgtaatcgcagcacttagggaggcagaggccgagatgggcagatctcctgaggtcaggagttcgaggccagccctaccaacatagtaaaaccctgcctctactaaatac i saiBol1.JH378145 I 2 C 0 s cebCap1.NW_016107540v1 1387455 113 + 3566421 ggcctgtaatcccagcacttcgggaggcagaggccgagatgggcggatctcctgaggtcaggagttcgagaccagccctaccaacatagtaaaaccctgcctctactaaatac i cebCap1.NW_016107540v1 I 14 C 0 s aotNan1.NW_018514471v1 1889263 113 - 9267652 ggcctgtaatctcagcccttcaggaggcagaggccgagatgggtggatctcctgaggtcaggagttcgagaccagccctaccaacatagtaaaaccctgcctctactaaatac i aotNan1.NW_018514471v1 I 2 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66736263 636 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12743970 0 + 14340318 C e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=12376.000000 s hg38.chrUn_KI270749v1 52803 1 + 158759 a s panTro5.chr1 101898172 1 - 228573443 a i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517904 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32528 1 - 126596 a i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66736899 1 - 72422247 a i ponAbe2.chrUn I 636 I 155 s nomLeu3.chr17 55768623 1 + 99891981 a i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133468886 1 - 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298567 1 + 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780482 1 + 3123512 a i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501050 1 + 10077455 a i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707124 1 + 127223203 a i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167323 1 - 1799296 a i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750949 1 + 6934359 a i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110364 1 - 128169293 a i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727880 1 - 18371965 a i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387568 1 + 3566421 a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1889376 1 - 9267652 a i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12743970 0 + 14340318 C e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=1345055.000000 s hg38.chrUn_KI270749v1 52804 155 + 158759 aaaaattagccgagtgtggtggtgcatgcctgtaatctcagctgcttgggaggctgagctaggagaattacttgaccct-ggcaggctgaggttgcagtgagccaagattgtgccattgcactctagcctgggcaacaaaagcaaaactccatctc s panTro5.chr1 101898173 155 - 228573443 aaaaattagcctagtgtggtggtgcatgactgtaatctcagctacttgggaggctgagctaggagaatcactagaccct-ggtaggctgaggttgcagtgagccaggattgtgccattgcactctagcctgggcaataaaagcaaaactccatctc i panTro5.chr1 C 0 C 0 s panPan2.chr7 108517905 155 - 162613886 aaaaattagccgagtgtggtggtgcatgcctgtaatctcagctacttgggaggctgaggcaggagaattacttgaccct-gggaggctgaggttgcagtgagccaagattgtgccattgcactctagcctgggcaataaaagcaaaactccatctc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32529 150 - 126596 aaaaattagccga--gttgtggtgcatgcctgtaatctcagctacttgggaggccgagctag--caattacttgaccct-gggaggctgaggttgcagtgag-caagattgtgccattgcactctagcctgggcaataaaagcaaaactccatctc i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768624 155 + 99891981 aaaaattagctgagtgtggtggtgcatgcctgtaatctcagctacttgggaggctgaggcaggagaattacttgaccct-gggaggctgaggttgcagtgagccaagattgtgccattgcactccagcctgggcaataaaagcaaaactccatctc i nomLeu3.chr17 C 0 I 4 s rheMac8.chr3 133468887 156 - 185818997 aaaaattagataagtatggcagcacatgcctgtaatcttagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgcaattgcactccagcctgggcaacaaaagcaaaactccgtctc i rheMac8.chr3 C 0 I 5 s macFas5.chr3 67298568 156 + 192294377 aaaaattagataagtatggcagcacatgcctgtaatcttagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgcaattgcactccagcctgggcaacaaaagcaaaactccgtctc i macFas5.chr3 C 0 I 5 s macNem1.NW_012011522v1 2780483 156 + 3123512 aaaaattagataagtatggaagcacatgcctgtaatcttagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgcaattgcactccagcctgggcaacaaaagcaaaactccgtctc i macNem1.NW_012011522v1 C 0 I 5 s cerAty1.NW_012000909v1 2501051 156 + 10077455 aaaaattagataagtatggcggcacatgcctgtaatcccagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgctattgcactccagcctgggcaacaaaagcaaaactccgtctc i cerAty1.NW_012000909v1 C 0 I 8 s chlSab2.chr21 5707125 155 + 127223203 aaaaattagacaagtatggcggcacatgcctgtaatctcagctacttgggaggctgaggcaggaaaattgcttgactct-gggaggcagaggttgcagtgagctgagactgtgctattgcactccagcctgggcaacaaaagcaaaactccgtctc i chlSab2.chr21 C 0 I 3 s manLeu1.NW_012105809v1 1167324 156 - 1799296 aaaaattagataagtatggcgccacatgcctgtaatcttagctacttgggaggctgaggcaggagaattgcttgactctggggaggcagaggttgcagtgagctgagactgtgctattgcactccagcctggggaacaaaagcaaaactccgtctc i manLeu1.NW_012105809v1 C 0 I 4 s colAng1.NW_012115910v1 1750950 156 + 6934359 aaaaattagacaagtatggtggcacatgcctgtaatcttagctacttgggaggctgaggcaggagaattgcttgactctggggaggcagaggttgcagtgagctgagagtgtgctattgcactccagcctgggcaacaaaagcaaaactccttctc i colAng1.NW_012115910v1 C 0 I 8 s calJac3.chr8 108110365 154 - 128169293 aagaatgagctaggcataatggtaaatgcctgtaatctcagctacttgagagtctgaggcaggagaatcccttgaa-ct-gggaggtggaggttgcagtgagctgaaattgtgccaatgcactccagcctggacaactagagcaaaactctgtctc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727881 155 - 18371965 aagactgagccaggcatagtggtacacgcctgtagtctcagctacttgagagtctgaggcaggagaatccattgaacct-gggaggtggaggttgcagtgcgctgaaattgtgccactgcactccagcctgggcaaccagagcaaaactctgtctc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387569 155 + 3566421 aagaatgagccaggcatagtggtacaagcctgtaatctcagctgcttgagagcctgaggcaggagaatccctcgaacct-gggaggtggaggttgcagtgagctgaaattgtgccactgcactccagcctgggcaactagagcaaaactccgtctc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1889377 155 - 9267652 aagaatgagccaggcatagtggtacatgcctgtaatctcagctacttgagagtctgaggcaggagaatcccttgaacct-gggaggtggaggttgcagtgagctgaaattgcgccactgcacttcagcctgggcaactagagcaaaacactgtctc i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66736900 155 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12743970 0 + 14340318 C e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=43084.000000 s hg38.chrUn_KI270749v1 52959 4 + 158759 aaaa s panTro5.chr1 101898328 4 - 228573443 aaaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518060 4 - 162613886 aaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32679 4 - 126596 aaaa i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66737055 4 - 72422247 aaaa i ponAbe2.chrUn I 155 I 78 s nomLeu3.chr17 55768783 4 + 99891981 aaaa i nomLeu3.chr17 I 4 C 0 s rheMac8.chr3 133469048 4 - 185818997 aaaa i rheMac8.chr3 I 5 C 0 s macFas5.chr3 67298729 4 + 192294377 aaaa i macFas5.chr3 I 5 C 0 s macNem1.NW_012011522v1 2780644 4 + 3123512 aaaa i macNem1.NW_012011522v1 I 5 C 0 s cerAty1.NW_012000909v1 2501215 4 + 10077455 aaaa i cerAty1.NW_012000909v1 I 8 C 0 s chlSab2.chr21 5707283 4 + 127223203 aata i chlSab2.chr21 I 3 C 0 s manLeu1.NW_012105809v1 1167484 4 - 1799296 aaaa i manLeu1.NW_012105809v1 I 4 C 0 s colAng1.NW_012115910v1 1751114 4 + 6934359 aata i colAng1.NW_012115910v1 I 8 C 0 s calJac3.chr8 108110519 4 - 128169293 aaaa i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 728036 4 - 18371965 aaaa i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 1387724 4 + 3566421 aaaa i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 1889532 4 - 9267652 aaaa i aotNan1.NW_018514471v1 C 0 I 1 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12743970 0 + 14340318 C e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=596780.000000 s hg38.chrUn_KI270749v1 52963 74 + 158759 aaaa-----tg-tattttagggta--atattttgagtatctttaCCTCCATATGTACAATAAATATTATTGTGATTTTTAAT s panTro5.chr1 101898332 75 - 228573443 aaaa----atg-catttttgggta--atattttgagtatctttaCCTCCATATGTACAATAAATAATATTGTGATTTTTAAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518064 75 - 162613886 aaaa----atg-tattttagggta--atattttaagtatctttaCCTCCATATGTACAGTAAATATTATTGTGATTTTTAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32683 73 - 126596 aaaa-----tg-tattttagggta--ataatttgagtatctttaCCTCCATATGTACAATAAATATT-TTGTGATTTTTAAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768787 74 + 99891981 aaaa-----tg-tattttagggta--atattttgagtatctttaCCTCCATATGTACAATAAATATTATTGTGATTTTTAAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469052 72 - 185818997 aaaa-----tg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298733 72 + 192294377 aaaa-----tg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780648 72 + 3123512 aaaa-----tg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501219 72 + 10077455 aaaa-----tg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707287 74 + 127223203 acaa-----tg-tattttagggta--atattttgagtttgtttaCCTCCATATATACAATAACTACTATTATGATTTTTAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167488 72 - 1799296 aaaa-----tg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751118 74 + 6934359 aaaa-----tg-cattttagggta--atattttgagtttgtttaCCTCCATATGTACAATAACTGTTATTATGATTTTTAAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110524 76 - 128169293 aaaa-----ag-tattttagggtaaaatattttgggtttctttaCCTCCATACGTACATTAACTACTATTGTAACTTTTAAT i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 728041 81 - 18371965 aaaagggaggg-tattttagggtaaaatattttgggtttctttaCCTCCATATGTACATTAACCATTATGATGACTTTTAAT i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1387729 82 + 3566421 aaaaaaaaaagttattttagggtaaaatattttgggtttctttaCCTCCATACGTACATTAACTATTATTGTAACTTTTAAT i cebCap1.NW_016107540v1 I 1 C 0 s aotNan1.NW_018514471v1 1889537 77 - 9267652 caaa----ggg-tattttagggtaaaatattgtgggtttcttTGCCTCCATACGTACAttaactattattgtaacttttaat i aotNan1.NW_018514471v1 I 1 C 0 s otoGar3.GL873564 12743970 60 + 14340318 aaag-----ta-tatttgtgagtgaaatagttagtttgcattcaTCTCCATGCCAACAATGAATGG---------------- i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66737059 78 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=11099.000000 s hg38.chrUn_KI270749v1 53037 1 + 158759 C s panTro5.chr1 101898407 1 - 228573443 C i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518139 1 - 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32756 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66737137 1 - 72422247 C i ponAbe2.chrUn I 78 I 52 s nomLeu3.chr17 55768861 1 + 99891981 C i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469124 1 - 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298805 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780720 1 + 3123512 C i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501291 1 + 10077455 C i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707361 1 + 127223203 C i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167560 1 - 1799296 C i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751192 1 + 6934359 C i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110600 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728122 1 - 18371965 C i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387811 1 + 3566421 C i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1889614 1 - 9267652 c i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12744030 1 + 14340318 C i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=322545.000000 s hg38.chrUn_KI270749v1 53038 36 + 158759 TTT-----TCTGTGGAG-AAAACACAGGTGTGATTTCTAG----TG s panTro5.chr1 101898408 41 - 228573443 TTTACTCTTCTGTGGAG-AAAACACAGGTGTGATTTCTAG----TG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518140 36 - 162613886 TTT-----TCTGTGGAG-AAAAAACAGGTGTGATTTCTAG----TG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32757 36 - 126596 TTT-----TCTGTGGAG-AAAACACAGGTGTGATTTCTAG----TG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768862 41 + 99891981 TTTACTCTTCTTTGGAG-AAAAAACAGGTGTGATTTCTAG----TG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469125 42 - 185818997 TTTACTCTTGTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298806 42 + 192294377 TTTACTCTTGTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780721 42 + 3123512 TTTACTCTTGTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501292 42 + 10077455 TTTACTCTTCTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707362 42 + 127223203 TTTACTCTTCTGTGGAGGAAAAAACAGGTGTGACTTCTAG----TG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167561 42 - 1799296 TTTACTCTTCTGTGGAGAAAAAAACAGGTGTGATTTCTAG----TG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751193 42 + 6934359 TTTACTCTTCTGTGGAGAAAAAAACCGGCGTGATTTCTAG----TG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110601 39 - 128169293 TTTACTCTTCTGTAGAG-AAAAAACAGGTGTGATTTCTAG------ i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728123 39 - 18371965 TTTACTCTTCTGTAGAG-AAAAAATAGGTGTGATTTCTAG------ i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387812 41 + 3566421 TTTACTCTTCTGTAGAG-AAAAAACAGGTGTGATTTCTAGTG---- i cebCap1.NW_016107540v1 C 0 I 245 s aotNan1.NW_018514471v1 1889615 41 - 9267652 tttacttttCTGTAGTG-AAAACACAGGTGTGATTTCTAG--TG-- i aotNan1.NW_018514471v1 C 0 I 242 s otoGar3.GL873564 12744031 37 + 14340318 -----CATTGTGTGAGAAAAGACATGGGCGTGATTTCTGG----TG i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66737138 52 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=85458.000000 s hg38.chrUn_KI270749v1 53074 11 + 158759 TAGCTGAACAT s panTro5.chr1 101898449 11 - 228573443 TAGCTGAACAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518176 11 - 162613886 TAGCTGAACAT i panPan2.chr7 C 0 I 2 s gorGor5.CYUI01000522v1 32793 11 - 126596 TAGCTGAACAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768903 11 + 99891981 TAGCTGAACAT i nomLeu3.chr17 C 0 I 2 s rheMac8.chr3 133469167 11 - 185818997 TAGCTGAACAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298848 11 + 192294377 TAGCTGAACAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780763 11 + 3123512 TAGCTGAACAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501334 11 + 10077455 TAGCTGAACAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707404 11 + 127223203 TAGCTGAATAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167603 11 - 1799296 TAGCTGAACAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751235 11 + 6934359 TAGCTGAACAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110640 7 - 128169293 ----TGAACAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728162 7 - 18371965 ----TGAACAT i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12744068 11 + 14340318 TGGTTAAATGT i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e ponAbe2.chrUn 66737138 52 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1889656 242 - 9267652 I e cebCap1.NW_016107540v1 1387853 245 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=7035.000000 s hg38.chrUn_KI270749v1 53085 2 + 158759 ----CG-- s panTro5.chr1 101898460 2 - 228573443 ----CG-- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518189 2 - 162613886 ----CG-- i panPan2.chr7 I 2 C 0 s gorGor5.CYUI01000522v1 32804 2 - 126596 ----CG-- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66737190 2 - 72422247 ----CA-- i ponAbe2.chrUn I 52 I 39 s nomLeu3.chr17 55768916 2 + 99891981 ----CG-- i nomLeu3.chr17 I 2 C 0 s rheMac8.chr3 133469178 2 - 185818997 ----CA-- i rheMac8.chr3 C 0 I 4 s macFas5.chr3 67298859 2 + 192294377 ----CA-- i macFas5.chr3 C 0 I 4 s macNem1.NW_012011522v1 2780774 2 + 3123512 ----CA-- i macNem1.NW_012011522v1 C 0 I 4 s cerAty1.NW_012000909v1 2501345 2 + 10077455 ----CA-- i cerAty1.NW_012000909v1 C 0 I 4 s chlSab2.chr21 5707415 2 + 127223203 ----CA-- i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012105809v1 1167614 2 - 1799296 ----CA-- i manLeu1.NW_012105809v1 C 0 I 4 s colAng1.NW_012115910v1 1751246 2 + 6934359 ----CA-- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110647 2 - 128169293 ----CA-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728169 2 - 18371965 ----CA-- i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12744079 8 + 14340318 CTTCCGTG i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e papAnu3.chr3 58150516 22304 + 180432695 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1889656 242 - 9267652 I e cebCap1.NW_016107540v1 1387853 245 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=6189.000000 s hg38.chrUn_KI270749v1 53087 1 + 158759 T s panTro5.chr1 101898462 1 - 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518191 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32806 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768918 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469184 1 - 185818997 T i rheMac8.chr3 I 4 C 0 s macFas5.chr3 67298865 1 + 192294377 T i macFas5.chr3 I 4 C 0 s macNem1.NW_012011522v1 2780780 1 + 3123512 T i macNem1.NW_012011522v1 I 4 C 0 s cerAty1.NW_012000909v1 2501351 1 + 10077455 T i cerAty1.NW_012000909v1 I 4 C 0 s papAnu3.chr3 58172820 1 + 180432695 T i papAnu3.chr3 I 22304 N 0 s chlSab2.chr21 5707421 1 + 127223203 T i chlSab2.chr21 I 4 C 0 s manLeu1.NW_012105809v1 1167620 1 - 1799296 T i manLeu1.NW_012105809v1 I 4 C 0 s colAng1.NW_012115910v1 1751248 1 + 6934359 T i colAng1.NW_012115910v1 C 0 I 4 s calJac3.chr8 108110649 1 - 128169293 C i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 728171 1 - 18371965 C i saiBol1.JH378145 C 0 I 1 s otoGar3.GL873564 12744087 1 + 14340318 C i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737192 39 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1889656 242 - 9267652 I e cebCap1.NW_016107540v1 1387853 245 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=172548.000000 s hg38.chrUn_KI270749v1 53088 36 + 158759 TTATTTGACAATATTGCACTtgtgtgtgggtgtgtg s panTro5.chr1 101898463 36 - 228573443 TTATTTGACAATATTGCAGTTGTGTGTGGGTGTGTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518192 30 - 162613886 TTATCTGACAATATTGCACTTGTGTGTGTG------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32807 35 - 126596 TTATTTGACAATATTGCACTTGTGT-TGGGTGTGTG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768919 32 + 99891981 TTATCTGTCAATATTGCACTtgtgtgtgtgtg---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469185 27 - 185818997 TTATTTGACAATATTGCACTTGTGTGT--------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298866 27 + 192294377 TTATTTGACAATATTGCACTTGTGTGT--------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780781 27 + 3123512 TTATTTGACAATATTGCACTTGTGTGT--------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501352 27 + 10077455 TTATTTGACAATATTGCACTTGTGTGT--------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707422 27 + 127223203 TTACTTGACAATACTGCACTTGTGTGT--------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167621 27 - 1799296 TTATTTGACAGTATTGCACTTGTGTGT--------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751253 27 + 6934359 TTATTTGACAATATTGCACTTGTACGT--------- i colAng1.NW_012115910v1 I 4 C 0 s calJac3.chr8 108110651 27 - 128169293 TTGTTTGACCACATTGCACTTGTATGT--------- i calJac3.chr8 I 1 I 16 s saiBol1.JH378145 728173 27 - 18371965 TTATTTGACCACATGGCACGTGTGTGT--------- i saiBol1.JH378145 I 1 I 6 s otoGar3.GL873564 12744088 36 + 14340318 TTATTTACCCATATCTCTCATGTGTGTGTGCACATG i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737192 39 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1889656 242 - 9267652 I e cebCap1.NW_016107540v1 1387853 245 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=5656.000000 s hg38.chrUn_KI270749v1 53124 3 + 158759 cgt s panTro5.chr1 101898499 3 - 228573443 CCT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518222 1 - 162613886 --T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32842 3 - 126596 CCT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66737231 3 - 72422247 TGT i ponAbe2.chrUn I 39 I 338 s nomLeu3.chr17 55768951 3 + 99891981 tgt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469212 2 - 185818997 -GT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298893 2 + 192294377 -GT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780808 2 + 3123512 -GT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501379 2 + 10077455 -GT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707449 2 + 127223203 -GT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167648 2 - 1799296 -GT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751280 2 + 6934359 -GT i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12744124 3 + 14340318 CAT i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1889656 242 - 9267652 I e cebCap1.NW_016107540v1 1387853 245 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I e saiBol1.JH378145 728200 6 - 18371965 I e calJac3.chr8 108110678 16 - 128169293 I a score=83744.000000 s hg38.chrUn_KI270749v1 53127 15 + 158759 -----------gtgtAGCTACTCTTT s panTro5.chr1 101898502 15 - 228573443 -----------GTGTAGCTACTCTTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518223 15 - 162613886 -----------GTGTAGCTACTCCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32845 15 - 126596 -----------GTTTAGCTACTCTTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768954 15 + 99891981 -----------gtgtAGCTACTCGTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469214 15 - 185818997 -----------GTGTAGCTACTCTTT i rheMac8.chr3 C 0 I 41 s macFas5.chr3 67298895 15 + 192294377 -----------GTGTAGCTACTCTTT i macFas5.chr3 C 0 I 11 s macNem1.NW_012011522v1 2780810 15 + 3123512 -----------GTGTAGCTACTCTTT i macNem1.NW_012011522v1 C 0 I 11 s cerAty1.NW_012000909v1 2501381 15 + 10077455 -----------GTGTAGCTACTCTTT i cerAty1.NW_012000909v1 C 0 I 41 s chlSab2.chr21 5707451 15 + 127223203 -----------GTGTAGCTACTCCTT i chlSab2.chr21 C 0 I 11 s manLeu1.NW_012105809v1 1167650 15 - 1799296 -----------GTGTAGCTACTCTTT i manLeu1.NW_012105809v1 C 0 I 11 s colAng1.NW_012115910v1 1751282 15 + 6934359 -----------GTGTAGCTACTCTTT i colAng1.NW_012115910v1 C 0 I 11 s calJac3.chr8 108110694 12 - 128169293 --------------TACCTACGTGTA i calJac3.chr8 I 16 I 4 s saiBol1.JH378145 728206 12 - 18371965 --------------TACCTACCTGTA i saiBol1.JH378145 I 6 I 4 s otoGar3.GL873564 12744127 26 + 14340318 TTGTAGTTTTGCTGTGACTATTTTTT i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737234 338 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1889656 242 - 9267652 I e cebCap1.NW_016107540v1 1387853 245 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=91769.000000 s hg38.chrUn_KI270749v1 53142 24 + 158759 ------------AATTTTGTTCTGACATAATCATTA--------- s panTro5.chr1 101898517 24 - 228573443 ------------AATTTTGTTCTCACATAATGATTA--------- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518238 24 - 162613886 ------------ACTTTTGTTCTCACTTAATGATTA--------- i panPan2.chr7 C 0 I 6 s gorGor5.CYUI01000522v1 32860 24 - 126596 ------------AATTTTGTTCTCACATAATGATTA--------- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768969 20 + 99891981 ------------ACCTTTGTTCTC----AATGATTA--------- i nomLeu3.chr17 C 0 I 6 s macFas5.chr3 67298921 24 + 192294377 ------------ATTGATGTTCTCACTTAATGATTA--------- i macFas5.chr3 I 11 I 6 s macNem1.NW_012011522v1 2780836 24 + 3123512 ------------ATTGATGTTCTCACTTAATGATTA--------- i macNem1.NW_012011522v1 I 11 I 6 s chlSab2.chr21 5707477 24 + 127223203 ------------ATTGATGTTCTCACTTAATGATTA--------- i chlSab2.chr21 I 11 I 6 s manLeu1.NW_012105809v1 1167676 24 - 1799296 ------------ATTGATGTTCTCACTTAATGATTA--------- i manLeu1.NW_012105809v1 I 11 I 6 s colAng1.NW_012115910v1 1751308 24 + 6934359 ------------ACTGATGTTCTCACTTAATGATTA--------- i colAng1.NW_012115910v1 I 11 I 6 s calJac3.chr8 108110710 24 - 128169293 ------------CTTGATGTTCTTACTGAATGATTA--------- i calJac3.chr8 I 4 I 3 s saiBol1.JH378145 728222 24 - 18371965 ------------CTTGATGTTCTCACTGAATGAGTA--------- i saiBol1.JH378145 I 4 I 6 s otoGar3.GL873564 12744153 45 + 14340318 ACCTACTTAAGACCAGATATTCTCACTTAATGATTTATGAAATAA i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737234 338 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e rheMac8.chr3 133469229 41 - 185818997 I e aotNan1.NW_018514471v1 1889656 242 - 9267652 I e cebCap1.NW_016107540v1 1387853 245 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I e cerAty1.NW_012000909v1 2501396 41 + 10077455 I a score=74852.000000 s hg38.chrUn_KI270749v1 53166 9 + 158759 GATATTAAC s panTro5.chr1 101898541 9 - 228573443 GATATTAAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518268 9 - 162613886 AATATTAAG i panPan2.chr7 I 6 C 0 s gorGor5.CYUI01000522v1 32884 9 - 126596 GATATTAAC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55768995 9 + 99891981 AATATTAAC i nomLeu3.chr17 I 6 C 0 s rheMac8.chr3 133469270 9 - 185818997 AATATTAAC i rheMac8.chr3 I 41 C 0 s macFas5.chr3 67298951 9 + 192294377 AATATTAAC i macFas5.chr3 I 6 C 0 s macNem1.NW_012011522v1 2780866 9 + 3123512 AATATTAAC i macNem1.NW_012011522v1 I 6 C 0 s cerAty1.NW_012000909v1 2501437 9 + 10077455 AATATTAAC i cerAty1.NW_012000909v1 I 41 C 0 s chlSab2.chr21 5707507 9 + 127223203 AATATTAAC i chlSab2.chr21 I 6 C 0 s manLeu1.NW_012105809v1 1167706 9 - 1799296 AATATTAAC i manLeu1.NW_012105809v1 I 6 C 0 s colAng1.NW_012115910v1 1751338 9 + 6934359 AATATTAAC i colAng1.NW_012115910v1 I 6 C 0 s calJac3.chr8 108110737 9 - 128169293 AATATTAAC i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 728252 9 - 18371965 AACATTAAC i saiBol1.JH378145 I 6 C 0 s otoGar3.GL873564 12744198 9 + 14340318 AAAATTAAC i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737234 338 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1889656 242 - 9267652 I e cebCap1.NW_016107540v1 1387853 245 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I e dasNov3.JH578441 1191368 1605 + 1446996 I a score=305806.000000 s hg38.chrUn_KI270749v1 53175 74 + 158759 AATTAATTCAGT---AAAATATATGTTTTTCAATAT-TTCTCCATG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAGTTTAATCATGCCC s panTro5.chr1 101898550 74 - 228573443 AATTAATTCAGT---AAAAGGTATGTTTTGCAATAT-TTCTCCATG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAGTTTAATCTTGCCC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518277 74 - 162613886 AATTAATACAGT---AAAATGTATATTTTCCAATAT-TTCTCCATG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAGTTTAATCATGCCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32893 72 - 126596 -ATTAATTCAGT---AAAATGTATGTTTTGCAATAT-TTCTCCATG--TTA-TA----------------------------------------------------------------------TGCTTTAAATTAGTTTAATCATGCCC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55769004 74 + 99891981 AATTAATACAAT---AAAATATATATTTTGCAATAT-TTCCCCATG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAGTTTAATCACGCCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469279 66 - 185818997 CATTAATACAGT--AAAAATGTATATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCT-----TTAGTTTAATTATACCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298960 66 + 192294377 CATTAATACAGT--AAAAATGTATATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCT-----TTAGTTTAATTATACCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780875 66 + 3123512 CATTAATACAGT--AAAAATGTATATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCT-----TTAGTTTAATTATACCA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501446 71 + 10077455 CATTAATACAGT--AAAAATGTACATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCTTTAAATTAGTTTAATTATGCCA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707516 71 + 127223203 CATTAATACAGT--AAAAATGTATATTTTGCAGTAT-TTCTCGATG------GA----------------------------------------------------------------------TGCTTTAAATTAGTTTAATTATGCCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167715 71 - 1799296 CATTAATGCAGT--AAAAATGTATATTTTGTAATAT-TTCTTGATG------GA----------------------------------------------------------------------TGCTTTAAATTAGTTTAATTATGCCA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751347 71 + 6934359 CATTAATGCGGT--AAAAATGTACATTTTGCAATAT-TTCTCGATG------AA----------------------------------------------------------------------TGCTTTAAATTAGTTTAATTATGCCA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110746 131 - 128169293 C---AATATCAT---AAAATGTATATTTTGCAGTAT-TTATTATTA------TATGCTTATAATGTGtaatatatttaatataaattataatatataatatatgattatagattataattaatttgtttctaattag--tatttaa---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728261 76 - 18371965 CAATAATATCAT---AAAATGTATA-TTTGCAGtat-ttattatta------ta---ttataatgtgtga------------------------------------------------------tgtttttatttag--tatttat---- i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12744207 75 + 14340318 TGTTAACACTAT---AAAATGTGTATTTTTCCATATACTTTAGATAACTAATTG----------------------------------------------------------------------TATTTTAA-TTGGCTTAATTATGCA- i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1192973 75 + 1446996 AATATATTCAGTTTTTACATGAATGTCTTGCAATAT-TTCTCCATG--TC--AC----------------------------------------------------------------------TGTTTTTAATTACTTTAATTGTGTCA i dasNov3.JH578441 I 1605 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737234 338 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e aotNan1.NW_018514471v1 1889656 242 - 9267652 I e cebCap1.NW_016107540v1 1387853 245 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I a score=195547.000000 s hg38.chrUn_KI270749v1 53249 23 + 158759 TTATAATGTGTACATTTTAACCT- s panTro5.chr1 101898624 23 - 228573443 CTATGATGTGTACATTTTAACCT- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518351 23 - 162613886 CTATTACGTGTACATTTTATCCT- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32965 23 - 126596 CTATAATGTGTACATTTTAACCT- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55769078 23 + 99891981 CTGTAACATGTACATTTTAACCT- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469345 23 - 185818997 ATATAATGTGTACATTTTAACCA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299026 23 + 192294377 ATATAATGTGTACATTTTAACCA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780941 23 + 3123512 ATATAATGTGTACATTTTAACCA- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501517 23 + 10077455 ATATAATGTGTACATTTTAACCA- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707587 23 + 127223203 CTATAATGCGTACATTTTAACCG- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167786 23 - 1799296 ATATAATGTGTACATTTTAACCA- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751418 23 + 6934359 CTGTAATGTGTGCATTTTAACCT- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110877 23 - 128169293 ttataatGTGTACATTTTAGGCT- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728337 23 - 18371965 tttttatgtttatattttaGGCT- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388098 23 + 3566421 ttataatGTGTACATTTTAGGCT- i cebCap1.NW_016107540v1 I 245 C 0 s aotNan1.NW_018514471v1 1889898 23 - 9267652 ttataatgtgtacattttaGGCT- i aotNan1.NW_018514471v1 I 242 C 0 s otoGar3.GL873564 12744282 23 + 14340318 GCACACTGCATGTATTTTAAACT- i otoGar3.GL873564 C 0 I 2317 s dasNov3.JH578441 1193048 24 + 1446996 TTATAAAGCATGTATTTTATACCT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737234 338 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I a score=1734986.000000 s hg38.chrUn_KI270749v1 53272 189 + 158759 --TTGA---CT-----ATAGGTCTCAATCTTACTTTGGTTCTTGTATTTGAATTTATGCTAATAAAGTCCTACAGCTAAAATAGATTATATAAAC--TTATCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATGAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATCTAAATTTTCAA- s panTro5.chr1 101898647 189 - 228573443 --TTGA---CT-----ATAGGTCTCAATCTTACTTTGGATCCTGTATTTCAATTTATGCTAATAAAGTCCTACAGCTAAAAAAGATTATATAAAC--TTATCTACATTTTTACTAGTATTCTGGCGTCATTTTA---AATTATGTAATCAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATCTAAATTTTTAA- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518374 192 - 162613886 --TTTA---CT-----ATAGGTCTCAATCTTACTTTGGTTCCTGTATTTGAATTCATGTTAATAAAGTCCTACAGATAAAAAGGATTACACAAAC--TTATCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATCTAAATTTTTAA- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 32988 183 - 126596 --TTGA---CT-----ATAGGTCTCAATCTTACTTTGGTTCCTGTATTTGAATTTATGCTAATAAAGTCCTACAGCTAAAA-AGATTATATAAA---TTATCTACATTTTTACTA-TATTCT-GTGTCATTTT----AATTATGTAATGAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTG---TTATCTGA-TTAAGGATCTAAATTTTTAA- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55769101 192 + 99891981 --TTTA---CT-----ATAGGTCTTAATCTTACTTTGGTTCCTGTGTTTGAATTTATGCTAATAAAGTCCTACAGCTAAAAAGGATTATATAAAC--TTTTCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATCTAAATTTTTAA- i nomLeu3.chr17 C 0 I 1 s rheMac8.chr3 133469368 188 - 185818997 --TTTA---CT-----ACAGCTCTCAATCTTACTTTT-CTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATTTAAATTTTTAA- i rheMac8.chr3 C 0 I 1 s macFas5.chr3 67299049 189 + 192294377 --TTTA---CT-----ACAGCTCTCAATCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATTTAAATTTTTAA- i macFas5.chr3 C 0 I 1 s macNem1.NW_012011522v1 2780964 189 + 3123512 --TTTA---CT-----ACAGCTCTCAATCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATTTAAATTTTTAA- i macNem1.NW_012011522v1 C 0 I 1 s cerAty1.NW_012000909v1 2501540 192 + 10077455 --TTTA---CT-----ACAGCTCTCAATCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATTTAAATTTTTAA- i cerAty1.NW_012000909v1 C 0 I 1 s chlSab2.chr21 5707610 192 + 127223203 --TTTA---CT-----ACAGCTCTCAATCTTACTTTTGCTCGTGTATTTGAATTTATGCTAATACAGTCCTATGGCTAAAAAGGATTATATAAAC--TTACCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATTTAAATTTTTAA- i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012105809v1 1167809 192 - 1799296 --TTTA---CT-----ATAGCTCTCAATCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACCTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATTTAAATTTTTAA- i manLeu1.NW_012105809v1 C 0 I 1 s colAng1.NW_012115910v1 1751441 191 + 6934359 --TTTA---CT-----ACAGCTCTCAATCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAT--TTACCTACATTCTTACTAGTATCCTGGTGTCATTTT----AATTATGTAATTAAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGAATTAAATTTTTAA- i colAng1.NW_012115910v1 C 0 I 1 s calJac3.chr8 108110900 192 - 128169293 --TTTA---CT-----ATATCTCTCAATCTTATTTTGGTTCTTGTATTTGAAATTATGCTAAGAAAGTCCTACAGCTAAAAAGGATTATGTAAAC--TTATCTACATTTTTAGTAGTTTTCTGATGTCATTTTT---AATTACATAATTAAATCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGGTTATTGTTATTATCTGAGTTAAGTCTCTAAATTTTTAA- i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 728360 192 - 18371965 --TTTA---CT-----ATGTCTCTCAATCTTATTTTGGTTCCTGTATTTGAATTTATGCTAAGAGAGTCCTACAGCTAAAAAGGATAATGTAAAC--TTATCGACATTTTTAGTAGTTTTCTGATGTCATTTTT---AATTACATAATGAAATCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTAATTTGGGGTATTGTTATTATCTCAGTTAAGGCTCTAAATTGTTAA- i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 1388121 191 + 3566421 --TTTA---CT-----ATATCTCTCAATCTTA-TTTGGTTCCCGTATTTGAATTTATGCTAAGAAAGTCCTACAGCTAAAAAGGATTATGTAAAC--TTATCTATATTTTTGGTAGTTTTCTGATGTCTTTTTT---AATTACATAATTAAATCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGGTTATTGTTATTATCTGAGTTAAGGCTCTAAATTTTTGA- i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 1889921 192 - 9267652 --TTTA---CT-----ATATCTCTCAATCTTATTTTGGTTCCTGTATTTGAATTTATGCTAAGAAAGTCCTACAGCTAAAAAGGATTATGTAAAC--TCATCTACATTTTTAGTAGTTTTCTGATGTCATTGTT---AATTACATAATTAAATCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGCTCTAAATTTTTAA- i aotNan1.NW_018514471v1 C 0 I 1 s otoGar3.GL873564 12746622 380 + 14340318 ---TTAATTCT-----ATGTTTTATATTTTTATTTTGTCTTCCATTTTTGAACATATGCTAATAAAGTTTTATGGCTACAAAGTATTATATGAACTATTGTTTGTATT-TTAGTAGTTTTCTGa----attttatataattatataattaaatGCATTTTCAAAAttttttaaattttatagacagctctcactctgttgctcagactacagataaaaatcagtacagtggcatgattattgcttattgtaactttgaaatcctgggatcaagaaatcttcctgaactcagtctcctaaagttctaggagtttacattctaagagtcagccactgcactcagcCATTTTAATTTGGATTATTGTTATTATATGGGGTAAGGTTCTAAATTATT--- i otoGar3.GL873564 I 2317 C 0 s dasNov3.JH578441 1193072 165 + 1446996 TATTCA---ATTATTAATGTATCTCAGTCT--CTTTGATTTATGTATTTGAATCTATTC-AAAAAATCCCTGTACCTGCAAAGGATTATATAACTCACCATCTCTATCTTTATTAGTGTTC----------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTAATTTGTCCTTATG---TTGTTTGAATAAAGAATGTCATTCtatata i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737234 338 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I a score=15561.000000 s hg38.chrUn_KI270749v1 53461 1 + 158759 T s panTro5.chr1 101898836 1 - 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518566 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 33171 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66737572 1 - 72422247 t i ponAbe2.chrUn I 338 I 1146 s nomLeu3.chr17 55769294 1 + 99891981 T i nomLeu3.chr17 I 1 C 0 s rheMac8.chr3 133469557 1 - 185818997 T i rheMac8.chr3 I 1 C 0 s macFas5.chr3 67299239 1 + 192294377 T i macFas5.chr3 I 1 C 0 s macNem1.NW_012011522v1 2781154 1 + 3123512 T i macNem1.NW_012011522v1 I 1 C 0 s cerAty1.NW_012000909v1 2501733 1 + 10077455 T i cerAty1.NW_012000909v1 I 1 C 0 s chlSab2.chr21 5707803 1 + 127223203 T i chlSab2.chr21 I 1 C 0 s manLeu1.NW_012105809v1 1168002 1 - 1799296 T i manLeu1.NW_012105809v1 I 1 C 0 s colAng1.NW_012115910v1 1751633 1 + 6934359 T i colAng1.NW_012115910v1 I 1 C 0 s calJac3.chr8 108111093 1 - 128169293 T i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 728553 1 - 18371965 T i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1388313 1 + 3566421 T i cebCap1.NW_016107540v1 I 1 C 0 s aotNan1.NW_018514471v1 1890114 1 - 9267652 T i aotNan1.NW_018514471v1 I 1 C 0 s otoGar3.GL873564 12747002 1 + 14340318 T i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1193237 1 + 1446996 t i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I a score=730349.000000 s hg38.chrUn_KI270749v1 53462 72 + 158759 ----TT-CTTACAA-A-TACTACATAATTATTTCTGAAACATATATTGACTAATCTCCCCTTTATATGATGTGCATTAT s panTro5.chr1 101898837 73 - 228573443 ----TTTCTTATAA-A-TATTACATAATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCATTAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518567 73 - 162613886 ----TTTCTTATAA-A-TATTACATCATTATTTCTGAATCATATATTCACTAATCTGCCCTTTATATGATGTTCATTAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 33172 73 - 126596 ----TTTCTTATAA-A-TATTACATAATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCATTAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55769295 72 + 99891981 -----TTCTTATAA-A-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTTTATGCTGTGCATTAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469558 72 - 185818997 -----TTCTTATAA-A-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299240 72 + 192294377 -----TTCTTATAA-A-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781155 72 + 3123512 -----TTCTTATAA-A-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501734 72 + 10077455 -----TTCTTATAA-A-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707804 72 + 127223203 -----TTCTTATAA-A-TATTACATCATTATTTCTGAACAATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168003 72 - 1799296 -----TTCTTATAA-A-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751634 72 + 6934359 -----TTCTCATAA-A-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111094 73 - 128169293 -----TTCTTATAA-AGTATTACATGATTATTTCTGCACCATATATTGACTAACCTGCCCTTTATACGAAGTGCATTAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728554 73 - 18371965 -----TTCTTATAA-ACTATTACATGATTATTTCTGCACCATATATTGACTAATCTGTTCTTTATATGAAGTGCATTAT i saiBol1.JH378145 C 0 I 195 s cebCap1.NW_016107540v1 1388314 73 + 3566421 -----TTCTTATAA-AGTATTACATGATTATTTCTGCACCATATATTGACTAACCTGTCCTTTATACAAAGTGCATTAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890115 73 - 9267652 -----TTCTTATAA-AGAATTACATGATTATTTCTGCACTATATATTGACTAACCTGCCCTTTATATGAAGTGCATTAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12747003 67 + 14340318 -----TCCTTATAA-A---TTATCATTTTATTCCTAGACC--ACAATGACTAATCTGCCTTTTACATG-TCTGCATTAT i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1193238 78 + 1446996 tttttattttataata-aattatCACATTTTCCTAGCATTCCATATGGACTACCCTGCCCTTTATAGGATATGTGTTAT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737573 1146 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I a score=484509.000000 s hg38.chrUn_KI270749v1 53534 48 + 158759 AAGAGCTTGGGATTGTTTCATTTGCAAAGATGAGTGTTTGAGAAGTAG s panTro5.chr1 101898910 48 - 228573443 AAGAGCTTGGGATTGTTTCATTTGCAAAGATGAATGCTTGAGAAGTAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518640 48 - 162613886 AAGAGCTTGGGATTGATTCATCTGCAAAGATGAATGCTTGAGAAGTAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 33245 48 - 126596 AAGAGCTTGGGATTGTTTCATTTGCAAAGATGAATGCTTGAGAAGTAG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55769367 48 + 99891981 AAGAGCTTGGGAATGATTCATCTGCAAAGACGAATGCTTGAGAAGTAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469630 48 - 185818997 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATACTTGAGAAGTAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299312 48 + 192294377 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATACTTGAGAAGTAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781227 48 + 3123512 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501806 48 + 10077455 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707876 48 + 127223203 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168075 48 - 1799296 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751706 48 + 6934359 AAGAGATTAAGATTGATTCATTTGCAAAGATGAATGTTTGAGAAGCAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111167 48 - 128169293 AAGAACTTGAAATTGATTCATTTGCAAAGATGAACACTTGAGAAGTAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728822 42 - 18371965 aaGAACTTGGGATTGATTCATTTGCAAAGAAGAACACTTG------AG i saiBol1.JH378145 I 195 C 0 s cebCap1.NW_016107540v1 1388387 48 + 3566421 AAGAACTTGGGACTGATTCATTTGCAAAGATGAACACTTGGGAAGTAG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890188 48 - 9267652 AAGAACTTGGGATTGATTCATTTACAAAGATGAACACTTGAGAAGTAG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12747070 45 + 14340318 -AAGATCAGGGAATAATTCATTTGCAAATATGAAAATATGAATA--AA i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1193316 48 + 1446996 AAGAACTTGAGATTGATGAATTTACAAGGATGAAAATATGAGAAGTGG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737573 1146 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51760998 193 - 55844845 I a score=1168414.000000 s hg38.chrUn_KI270749v1 53582 134 + 158759 ---ATATTTAATCAT----AACATTTC---------AAAATCTACT------GGATAACCTA--------------GAATTG--A-----------------------------AAAATAGCCTA------------------------TAGGTTGAAAAAC------------------------------------------TCC---------------TGTAGT--GA---AGAAAGAAAATAAC-----------------------------------------------TAATATACAGTGACAATATAAATATTATAAGTA------TTTA-----T s panTro5.chr1 101898958 134 - 228573443 ---ATATTTAATCAT----AACATTTC---------AGAATCTACT------GGATAACCTA--------------GAATTG--G-----------------------------AAAATAGCCTA------------------------TAGGTTGAAAAAC------------------------------------------TCC---------------TGTAGT--GA---AGAAAGAAAATAAC-----------------------------------------------GAATATACAGTGACAATATAAATATTATAAGTA------TTTA-----T i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518688 131 - 162613886 ---ATATTTCATCAT----AACATTTC---------AAAATCTACT------GGATAACCTA--------------GAATTG--A-----------------------------AAACTTGTCTA------------------------TAGGCTAAAAAAC------------------------------------------TCC---------------TATAGT--GA---AAAAAGAAAATAAC-----------------------------------------------TAATATACAGTGACAATATAAA---TAGAAGTA------TTTA-----T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 33293 133 - 126596 ----TATTTAATCAT----AACATTTC---------AAAATCTACT------GGATAACCTA--------------GAATTG--A-----------------------------AAAATAGCCTA------------------------TAGGTTGAAAAAC------------------------------------------TCC---------------TGTAGT--GA---AGAAAGAAAATAAC-----------------------------------------------TAATATACAGTGACAATATAAATATTATAAGTA------TTTA-----T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55769415 131 + 99891981 ---ATATTTAATCAT----AACGTTTC---------AAAATCTGCT------GGATAACCTA--------------GAATTG--A-----------------------------AAAATAGCCTA------------------------TAGGTTGAAAAAC------------------------------------------TCC---------------TGTAGT--GA---AAAAAGAAAATAAC-----------------------------------------------TAATATATAGTGACAATATAAA---TAGAAGTA------TTTA-----T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469678 134 - 185818997 ---ATATTTAATCAT----AACATTTC---------AAAATCTACT------GGATAACCTA--------------GAATTG--A-----------------------------AAAATTGCCTC------------------------TAGGTTGAAAAAC------------------------------------------TCC---------------TGTAGT--GA---AAAAAGAAAATAAC-----------------------------------------------TAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299360 134 + 192294377 ---ATATTTAATCAT----AACATTTC---------AAAATCTACT------GGATAACCTA--------------GAATTG--A-----------------------------AAAATTGCCTC------------------------TAGGTTGAAAAAC------------------------------------------TCC---------------TGTAGT--GA---AAAAAGAAAATAAC-----------------------------------------------TAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781275 134 + 3123512 ---ATATTTAATCAT----AACATTTC---------AAAATCTACT------GGATAACCTA--------------GAATTG--A-----------------------------AAAATTGCCTC------------------------TAGGTTGAAAAAC------------------------------------------TCC---------------TGTAGT--GA---AAAAAGAAAATAAC-----------------------------------------------TAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501854 129 + 10077455 ---ATATTTAATCAT----AACATTTC---------AAAATCTACT------GGATAACCTA--------------GAATTG--A-----------------------------AAAATTGCCTC------------------------TAGGTTGAAAAAC------------------------------------------TCC---------------TGTAGT--GA---AAAAAGAAAATAAC-----------------------------------------------TAATATACAGTGACAATATAAATAGTAGAAGTA---------------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707924 134 + 127223203 ---ATATTTAATCAT----AACATTTC---------AAAATCTACT------GGATAACCTA--------------GAATTG--A-----------------------------AAAATTGCCTC------------------------TAGGTTGAAAAAC------------------------------------------TCC---------------TGTAGT--GA---AAAAAGAAAATAAC-----------------------------------------------TAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168123 134 - 1799296 ---ATAGTTAATCAT----AACATTTC---------AAAATCTACT------GGATAACCTA--------------GAATTG--A-----------------------------AAAATTGCCTC------------------------TAGGTTGAAAAAC------------------------------------------TCC---------------TGTAGT--GA---AAAAAGAAAATAAC-----------------------------------------------TAATATACAGTGACAGTATAAATAGTAGAAGTG------TTTA-----T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751754 134 + 6934359 ---ATATTTAATCAT----AACATTTC---------AAAATCTACT------GGATAACCTA--------------GAATTG--A-----------------------------AAAATTGCCTC------------------------TAGGTTGAAAAAC------------------------------------------TCC---------------TGTAGT--GA---AAAAAGAAAATAAC-----------------------------------------------TAATATACAGTGACAATATAAATAGTAGAAGAA------TTCA-----T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111215 127 - 128169293 ---ATATTTAATCAT----AACATTTC---------AA------------------AACCTA--------------GTATTG--A-----------------------------AAAATAGCCTA------------------------TAGGCCGAAAATT------------------------------------------TCC---------------TGTAGC--AA---AAAAAGAAAATAAC-----------------------------------------------TAATATGTAGTGACAATATAAATATTAGAAGTA------TTTATTTTGT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728864 122 - 18371965 ---ATGTTTAATCAT----AACATTTC---------AA------------------AACCTA--------------GAATTG--A-----------------------------AAAATAGCTTG------------------------TAGGTTGAAAATG------------------------------------------TCC---------------TGTAGT--GA---AAAAAGAAAATATC-----------------------------------------------TAATATGTAGTGACAATATAAATATTAGAAGTA------TTTA-----T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388435 122 + 3566421 ---ATATTTAATCAT----AACATTTC---------AA------------------AACCTA--------------GAATTG--A-----------------------------AAAATAGCCTA------------------------TAGGTTGAAAATT------------------------------------------TCC---------------TGTAGC--AA---AAAAAGAAAATAAC-----------------------------------------------TAATATGTAGTGATAATATAAAT-----AAGTA------TTTATTTTAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890236 127 - 9267652 ---AAATTTAATCAT----AACATTTC---------AA------------------AACCTA--------------GAATTG--A-----------------------------AAAATAGCCTA------------------------TAAGTTGAAAATT------------------------------------------TCC---------------TGTAGC--GA---AAAAAGAAAATAAC-----------------------------------------------TAATATGTCGTGACAATATAAATATTAGAAGTA------TTTATTTTAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12747115 129 + 14340318 ---ATATGTCATCAT----AACATCT---------------------------AATAACCCA--------------GAAATG--A-----------------------------AAACAAGC--A------------------------TAGGTTGGAAAAT------------------------------------------TCC---------------TATAGT--AAAATAAAGAGAAAATATT-----------------------------------------------AATCATATAGGAATACtataaatatcaaaaattaattatttca-----t i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51761191 134 - 55844845 ---ATGATTACTCAT----AATATTTA---------ATAACCTACA------TGTTAACCTA--------------TAATTGAAA-----------------------------AAAAAAGGCTG------------------------TGGGTTAGAAAAT------------------------------------------CGC---------------TATAGTAAGA---AAAAAGAAAATGTT-----------------------------------------------AAATATATA---ATCGTGTAAATATTAGAA-TA------TTTA-----T i canFam3.chr18 I 193 I 1320 s dasNov3.JH578441 1193364 327 + 1446996 ATAACATGTAATAACTAAAAATATGCCTTGGGTTGGAAAATCTATATATTAGGGGCAAACTACTAAATATATAGTGGCATTG--ATATTATTAGAAAAAATGATAAGCAAAATTAAAATACTCTAAGTGGAACAAAAGAATCATTTTATCAGGTTAAAAATTGAATTTCTAATAAAGAAATTTCTCAGTTGATTGAAATATGTATCCATAATGCTGCATGGATATAGG--GT---AAGAAAAAAATGTCAAGAAGGACAAAGCAAAAATCACACAGGCAATAAATATGTTAAGATATAAAACATGAGAATAATATAGTTGATAATGGTA------TGCA-----A i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737573 1146 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I a score=334797.000000 s hg38.chrUn_KI270749v1 53716 29 + 158759 TTTATTAT--------------CGCCCTGAAATTTGATAA--------TAC s panTro5.chr1 101899092 29 - 228573443 TTTATTAT--------------CGCCCTGAAATTTGATAA--------TAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518819 29 - 162613886 TTTATTAT--------------TGCCCTGAAATTTGGAAA--------TAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 33426 29 - 126596 TTTATTAT--------------CACCCTGAAATTTGATAA--------TAC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55769546 29 + 99891981 TTTATTAT--------------TGCCCTGAAATTTGGTAA--------TAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469812 29 - 185818997 TTTATTAT--------------TGCCCTGAAATTTGATAA--------TAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299494 29 + 192294377 TTTATTAT--------------TGCCCTGAAATTTGATAA--------TAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781409 29 + 3123512 TTTATTAT--------------TGCCCTGAAATTTGATAA--------TAC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501983 29 + 10077455 TTTATTAT--------------TGCCCTGAAATTTGATAA--------TAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708058 29 + 127223203 TTTATTAT--------------TGCCCTGAAATTTGATAA--------TAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168257 29 - 1799296 TTTATTAT--------------TGTCCTGAAATTTGATAA--------TAC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751888 29 + 6934359 TTTATTAT--------------TGCCCTGAAATTTGATAA--------TAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111342 29 - 128169293 TTTATTAT--------------TGCCCTGAAATTTGACAA--------TAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728986 29 - 18371965 TTTATTAT--------------CGCCCTGAAATTTGATAA--------TAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388557 29 + 3566421 TTTATTAT--------------TGCCCTGAAATTTGACAA--------TAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890363 29 - 9267652 TTTATTAT--------------TGCCCTGAAATTTGACAA--------TAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12747244 29 + 14340318 tttataat--------------tGTTCTGAAATTTGAGAA--------TAC i otoGar3.GL873564 C 0 I 580 s dasNov3.JH578441 1193691 51 + 1446996 ATTATTATGTACATATGTAAAATCCCATGATATTTGAGAAGGAATAATTAT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737573 1146 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I a score=5247245.000000 s hg38.chrUn_KI270749v1 53745 536 + 158759 --AAacatgtaatatcta-c-atatcatccatatagcaggtcaga---aaaaatca--atacattcttcaaaaatttagcataacagaaaatgcactct-----ctctccttgatggaattaagttacaaataaa-agta-aaaataagt-agataagtagatgg-aagtagatgttt-aaaaacaaagaaaaatatttGTTTTGGATAACATAAAATCTCAATTGACAATTCCAATATTTCCAGAACTTtggctgtcaactggtggagagt---tttcc--ccaggagacatttgtcaatgtctag-agttattgtggggatgtcaagactggtggaggtg-----------tg---aaatt-------tagaggtcaa-------acgaaacacctagcattgc-tagggcagcctcccaccacaaagaatcctctggtcctaaaggtaaatattaccaaggttgagaaaccATAGTATAGAAAGTAAACACTA-TGTAGCTATTCCAAGTGCTCAGGAAAACACATCAGTGCCCTCGAGAGG-AAAAGTGTAAACATTTTA-ATTGCTGTACATGGTGACACAAATCCAT s panTro5.chr1 101899121 534 - 228573443 --AAACATGTAATATCTA-C-GTATCATCCATATATCAGGTCATA---AAAAATCA--ATACATTCTTCAAAAATTTAGCATAACAAAAGATGCACTCT-----CTCTCCTTGATAGAATTAAGTTACAAATAAA-AGTA-AAACTAAGT-AGATAAGTAGATGG-AAGCAGATGTTT-AAAAACAAAGAAAAATATTTGTTTTAGATAACATAAAATCTCAATTGACAATTCCAATATTTCCAGAACTTTGCCTGtcaactggtggag--t---tttcc--ccaggagacatttgtcaatgtctag-ggttattgtggggatgtcaagactggtggagttg-----------tg---aaatt-------tagaggtcaa-------acgaaacacctagcattgc-tagggcagcctcccacaacaaagaatcctctggtcctaaaggtaagtagcaccaaggatcagaaaccATAATCTAGACAGGAAACACTA-CGTAGCTATTCCAAGTGCTCAGGAAAACACATCATTGCCCTCGAGGGG-AAAAGTGTAAACACTTTA-ATTGCTGTACATGGTGACACAAATCCAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108518848 528 - 162613886 --AAACATGTAAGATCTA-C-ATATCATCCATATATCAGGTCATA---AAAAATCA--CTACATTCTTGAAAAATTTAGCATAACAGAAAATGCACTCT-----CTATCCTTGATGGAGTTAAGTTACAAATAAA-AGTA-A---------AGATAAGTAGATGG-AAGTAGATGTTT-AAAAACAAAGAAAAATATTTGTTTTGGATAACATAAAAACTCAGCTGACAATTCCAATATTTCAAGAACTTtggctgtcaactggtggagatt---tttcc--ccaggagacatttggcaacgtctag-ggttattgtggggatgtcaagactgctgggtgtg-----------tg---aaatt-------tagaggtcaa-------atgaaacttctagcattgc-tagggcagcctcccacaacaaagaatcctctggtcctaaaggtaaatagcaccaaggttgagaaaccATAATCTAGAAAGTAAACACCA-TGTAGCTATTCGAAGTGCTCAGGAAAACACATCAATGCCCTCGAGGGG-AAAAGTGTAAACATTTTA-ATTGCTGTACATGGTGACACAAATCCAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 33455 533 - 126596 --AAACATGTAATATCTA-C-ATATCATCCATATATCAGGTCAT----AAAAATCA--ATACATTCTTCAAAAATTTAGCATAACAGAAAATGCACTCT-----CTCTCCTTGATGGAATTAAGTTACAAATAAA-AGTA-AAAATAAGT-AGATAAGTAGATGG-AAGTAGATGTTT-AAAAACAAAGAAAAATATTTGTTTTGGATAACATAAAATCTCAATTGACAATTCCAATATTTCCAGAACTTTGCCTGtcaactggtggagagt---tttcc--ccaggagacatttgtcaatgtctag-ggttattgt-gggatgtcaagactggtggaggtg-----------tg---aaatt-------tagaggtcaa-------acgaaacacctagcattgc-tagggcagcctcccacaacaaagaatcctctggtcctaaaggtaagtagcaccaaggttgagaaaccATAATCTAGACAGGAAACACTA-CGTAGCTATTCC-AGTGCTCAGGAAAACACATCAGTGCCCTCGAGGGG-AAAAGTGTAAACATTTTA-ATTGCTGTACATGGTGACACAAATCCAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55769575 514 + 99891981 --AAACAGGTAATATCTA-C-ATATCATCCATACAACAGATTATA---AAAAATCA--ATACATTCTTGAAAAATTCAGCATAACAGAAAATGCACTCT-----CTATCCTTGATGGAA------------------------AATAAGT-AGATAAGTAGATGG-AAGTAGATGTTT-AAAAACAAAGAAAAATATTTGTTGTGAATAACATAAAAACTCAACTGACAATTCCAATATTTCAAGAACTTtggctgtcaactggtggagatt---tttcc--ccaggagacatttggcaatgtctgg-ggttattgtggggatgtcaagactggtgggggtg-----------tg---aaatt-------tagaggtcaa-------atgaaacttctagcattgc-tagggcagcctcccacaacaaagaatcttctggtcctaaaggtaaatagtaccaaggttgagaaaccATAATCTAGGAAGTAAACACCA-TGTAGCTATTCCAAGTGCTCAGGAAAACACATCAATGCCCTCAAGGGG-AAAAGTGTAAACATTTTA-ATTGCTGTACATGGTGATGCAAATCCCT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133469841 531 - 185818997 --AAACATGTAATACCTA-C-ATATCATCCATATATTAGGTCAT----AAAAATCA--AAACATTCTTGAAAAAATTAGCATAATAGAAAATGCA---------CTATCCTTGATGGAATTAAGTTACAAATAAA-AGTA-AAAATAAGT-AGATAAGTAGATGG-AAGTAGAAGTTT-TAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatt---tttcc--ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagactggtgggcgtg-----------tg---aaatt-------tggaggtcaa-------atgaaacatctagcattgc-tagggcagcctcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAA-TGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGG-AAAAGTGTAAACATTTTA-ATTGCGGTACATGGTGACACAAATCCAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299523 531 + 192294377 --AAACATGTAATACCTA-C-ATATCATCCATATATTAGGTCAT----AAAAATCA--AAACATTCTTGAAAAAATTAGCATAATAGAAAATGCA---------CTATCCTTGATGGAATTAAGTTACAAATAAA-AGTA-AAAATAAGT-AGATAAGTAGATGG-AAGTAGAAGTTT-TAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatt---tttcc--ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagactggtgggcgtg-----------tg---aaatt-------tggaggtcaa-------atgaaacatctagcattgc-tagggcagcctcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAA-TGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGG-AAAAGTGTAAACATTTTA-ATTGCGGTACATGGTGACACAAATCCAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781438 531 + 3123512 --AAACATGTAATACCTA-C-ATATCATCCATATATTAGGTCAT----AAAAATCA--AAACATTCTTGAAAAAATTAGCATAATAGAAAATGCA---------CTATCCTTGATGGAATTAAGTTACAAATAAA-AGTA-AAAATAAGT-AGATAAGTAGATGG-AAGTAGAAGTTT-TAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatt---tttcc--ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagactggtgggcgtg-----------tg---aaatt-------tggaggtcaa-------atgaaacatctagcattgc-tagggcagcctcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAA-TGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGG-AAAAGTGTAAACATTTTA-ATTGCGGTACATGGTGACACAAATCCAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2502012 531 + 10077455 --AAACATGTAATATCTA-C-GTATCATCCATATATTAGGTCAT----AAAAATCA--AAACATTCTTGAAAAATTTAGCATAATAGAAAATGCA---------CTATCCTTGATGGAATCAAGTTACAAATAAA-AGTA-AAAATAAGT-AGATAAGTAGATGG-AAGTAGAAGTTT-TAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATATCAAGAACTTGggctctcaactggtggaaatt---tttcc--ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagactggtgggcgtg-----------tg---aaatt-------tggaggtcaa-------atgaaacatctagcattgc-tagggcagcttcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAA-TGTAGCTACTCGAAGTGCTCAGGAAAACATATCAATGCCCTTGAGGGG-AAAAGTGTAAACATTTTA-ATTGCGGTACATGGTGACACAAATCCAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708087 532 + 127223203 --AAATATGTAATGTCTA-C-GTATCATCCATATATTAGGTCAT----AAAAATCA--AAACATTCTTGAAAAATTTAGCATAATAGAAAATGCA---------CTATCCTTGATGGAATCAAGTTACAAATAGA-AGTA-AAAATAAGT-AGATAAGTAGATGG-AAGTAGGAGTTT-TAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTTAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatt---tttcc--ccaggagacatttggcaatgtctagaagttattgtggggatgtcaagactggtgagcatg-----------tg---aaatt-------tggaggtcaa-------atgaaacatctagcattgc-tagggcagcctcccacaacaaataatcctgtggtcctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAA-TGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGG-AAAAGTGTAAACATTTTA-ATTGCTGTACATGGTAACACAAATCCAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168286 531 - 1799296 --AAACATGTAATACCTA-C-ATATCATCCATATATTAGGTCAT----AAAAATCA--AAACATTCTTGAAAAATTTAGCATAATAGAAAATGCA---------CTATCCTTGATGGAATTAAGTTACAAATAAA-AGTA-AAAATAAGT-AGATAAGTACATGG-AAGTAGAAGTTT-TAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatt---tttcc--ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagactggtgggcgtg-----------tg---aaatt-------tggaggtcaa-------atgaaccatctagcattgc-tagggcagcttcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAA-GGTAGCTACTCGAAGTGCTCAGCAAAACACATCAATGCCCTTGAGGGG-AAAAGTGTAAACATTTTA-ATTGCGGTACATGGTGACACAAATCCAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751917 531 + 6934359 --AAACATGTAATATCTA-C-ATATCATCCATATATTAGGTCAT----AAAAATCA--AAACATTCTTGAAAAATTTAACATAACAGAAAATGCA---------CTATCCTTGATGGAATTAAGTTACAAATAAA-AGTA-AAAATAAGT-AGATAAGTAGATGG-AAGTAGAAGTTT-TAAAACAAAGAAAAATATTTGTTTGTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatt---tttcc--ccaggagacatttggcaatgtctag-agttattgtggggatgtcaagactggtgggcgta-----------tg---aaatt-------tggaggtcaa-------atgaaacatctagcattgc-tagggcagcctcccacaacaaataatcctctggttctaaaagtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAA-TGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGG-AAAATTGTAAACATTTTA-ATTGCTGTACATGGTGACACAAATCCAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111371 535 - 128169293 --ACACATGTAATATATA-C-ATATTACCCATATATTAGCTCATA---AAAAA-CA--ATACATTCTTGAAAAATTTAGCATGACAGAAAATGCACTTT-----CTATCCTTGATGCAATGAAGTTACAAATAAA-AGTA-AAAATAAGT-ACAGAAGTAGATTG-AAGTAGATGTTT--AAAATAAAGAAAAATATTTGTTTTGGATAACATAAATACTCAATTGATAATTCCAATATTTCAAGCACTTtggctctcaactggtggagatt---cttcc-cccaggtgacatttggcaatgtctag-agttatggtggggatgtcgagaatggtgggggtg-----------tg---aaatt-------taggggtcaa-------acgaaacttctaacattgt-cagggcaacttcccaccacgaagaatcctctggtcctaaaggtaaatagctccaaggttgaaaaaccATAATCTAGAAAATAAAAACCC-TGTAGGCATTCAAAGTGCTCAGGAAAACACATCGATGCCCTTGAGGGA-AAAATTGTAAACATTTTA-ATTGCTGTGCATAGTGCCAAAAATCCAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 729015 534 - 18371965 --ACACATGTAATAGATA-C-ATACTACCCATATATTAGCTCATA---AAAA---A--ATACATTCTTGAAAAATTTAGCATGACAGAAAATGCACTTT-----CTATCCTTGATGCAATGAAGTTACAAATAAA-AGTA-AAGATAAGT-AGATAAATAGATTG-AAGTAGATGTTT-AAAAATAAAGAAAAATATTTGTTTTGGATAACATAAATGCTCAATTGACAATTCCAATATTTCAAGCACGTtggctctcaactggtggagatt---cttcc-tccaggagacatttggcaatgtctag-agttatggtggggatgtcaagactggtaggagtg-----------tg---aaatt-------tagaggtcaa-------acaaaacttctaacattac-cagggcaacttcccaccacaaagaatcctctggtcctaaaggtaaacagcaccaaggttttaaaaccATAATCTGGAAAAGAAAAACCG-TGTAGGCATTCAAAGTACTCAGGAAAACACATCCATGCCCTCGAGGGG-AAAAGTGTAAACATTTTA-ATTGTTGTTCATGGAGACACAAATCCAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388586 534 + 3566421 --ACACATGTAATATATA-C-GTATTACCCATATATTAGCACATT---AAAAA--A--ATACATTCTTGAAAAATCTAGCATGACAGAAAATGCATTTT-----CTATCCTTGATGCAATGAAGTTACAAATAAA-AGTA-AAAATAAGT-AGATAAGTAGATTG-AAGTAGATGTTT-AAAAATAAAG-AAAATATTTGTTTTGGATAACATAAATACTCAATTGACAATTCCAATATTTCAAGCACTTtggctctgaactggtggagatt---cttcc-cccaggagacatttggcaatgtctag-agttatggtggggatgtcaagactggtgaggttg-----------tg---aaatt-------tagaggtcaa-------acaaaacttctaacattgc-cagggcaacttcccaccacaaagaatcctctggtcctaaaggttaatagcaccaaggttcaaaaaccATAACCTAGAAAATAAAAACCT-TGTAGGTGTTCAAAGCGCTCAGAAAAACACATCGATGCCCTGGAGGGG-AAAAGTGTAAACATTTTA-ATTGCTGTGCATGGTGACACAAATCCAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890392 527 - 9267652 --ATACATGTAATATATA-C-ATATTACCCATATATTAGCTCATA---AAAAAACA--ATACACTCTTGAAAAATTTAGCATAACAGAAAATGCACTTT-----CTATCCTTGAAGCAATGAAGTTACAAATAAA-AGTA-AAAATAAGT-AGAT-----------AAGTATATGTTT-AAAAACAAAGAAAAATATTTGCTTTGGATAACATAAATACTCAATTGACAATTCCAATATTTCAAGCACTTtggctctcaactggtggagatt---cttcc-cccaggagacatttggcaatgtctag-agttatggtggggatgtcaagactggtgggggtg-----------tg---aaatt-------tagaggtcaa-------acgaaacttctaacgttgc-cagggtgacttcccaccacaaagaatcctctggtcctaaaggtaaatagcaccaaggttgaaaaatcATAATCTAGAAAATAAAAACTA-TGAAGGCATTCCAAGTGCTCAGGAAAACACATAGATACCCTCGAGGGG-AAAAGAGTAAACATTTTA-CTTGCTGTGCATGGCGACACAAATCCAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12747853 491 + 14340318 --GCACATGGAATGTCTGCC-ACATTATCCACAGATC-GTTCATA---AGGAAACATCAGATGCTCTTGAAAAATCTAATATAGCTGAAAATACATTCT-----CTGTGCTTAGTGCCATGAACTTATAAATGGA-AGTAGAAAATAAGT-GGATAAGTGGATAG-AAGTCCATGTTG--AAAACAGGAA-----ATTTATTTTGGATAACATAAAACCTCTCTCTATAATTAAAAAACATCAAAATTTgtgactctcaaatggtggat-tt---tatcc--gcagaagacattttgcaaagtgtag-agatactctggggttgtcaagacttgggcatggg-----------tgcccaaatccagagggtagaggtcag-------gctcaacagccagcatgtg-caggaaaacctcccac--------------------------------------------aGAAACTGTAATCTACAAAATAAAAACTG-TTCAGCTGTTTGAAATTCTTGGGAAAACACATCAACACGCACGTGGGG-GAAAA-------ATTTTA-ATTGCTGTTTGTGGTTACATAAACCCAT i otoGar3.GL873564 I 580 C 0 s dasNov3.JH578441 1193742 579 + 1446996 AAGCATCTGTAATATCTA-TAAAAATACCCACCTATTAACTCAGAAAGAAAAATTT--ACACTTTTTTAAAAACTTTAATGTAACAGAAAATATACTCTCAGTCCTGTTCTTGAGTCAATAAACTTGGGGATTAATAGCA-GAAGTAGGGAAGAAAAAAAAATAGCTCTTAGATGtttaaaaaataaataatttttttttCTTTGTATAAGATAAGAA-TCAATGTGCAATCCTGA-ACATTAAGAGATGCTgttttcagttgatggtaattgtgttcccacccccggggcatgtggcaatgtgtga-agatatt-tagggttgtcaaaa-tagtgaatgggttggatgctactg---gaatcaagag--tagaggtcaaggatatggctgaatgtgctacattgcatagggcacccccgaaaaacaaagaattatctggcccactatatcaatggtgctgaaattaagaaaccctgAAATAGAAAATTAAAATAGTTTTAGCTGTAATAAATGTTAAGGAAAAAAGTGCAATGTTCAGTAGAAATAAGAGTATAAGCATTTTGTATTACTATGTAAAGTCATACAAATTCAT i dasNov3.JH578441 C 0 I 4121 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737573 1146 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I a score=236928.000000 s hg38.chrUn_KI270749v1 54281 28 + 158759 GT---------------TGTTAATCTAAGTGGAAGGG------------------------------------------------------------------------GCtgaa s panTro5.chr1 101899655 28 - 228573443 GT---------------tgttaatctaagtggaaggg------------------------------------------------------------------------gctgaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 108519376 28 - 162613886 GT---------------TGTTAATCTAAGTGGAAGGG------------------------------------------------------------------------GCtgaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 33988 27 - 126596 GT---------------TGTTAATCTAAGTGGAA-GG------------------------------------------------------------------------GCtgaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55770089 28 + 99891981 GT---------------TGTTAATCCAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133470372 28 - 185818997 GT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300054 28 + 192294377 GT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781969 28 + 3123512 GT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2502543 100 + 10077455 GT---------------TGTTAATCTAAGTGGAAGAGGCTGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGTTGTTAATCTAAGTGGAAGACGCtgaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708619 28 + 127223203 GT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168817 28 - 1799296 GT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCTGAA i manLeu1.NW_012105809v1 C 0 I 6408 s colAng1.NW_012115910v1 1752448 28 + 6934359 GT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCTGAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111906 28 - 128169293 GT---------------tgttggtctaagtggaagag------------------------------------------------------------------------gcttaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 729549 28 - 18371965 GT---------------TGTTGGTCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389120 28 + 3566421 GT---------------TGTTGGTCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890919 28 - 9267652 GT---------------TGTTGGTCTAAGTGGAAGAG------------------------------------------------------------------------ACtgaa i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12748344 43 + 14340318 ATGCACACATGACAtcaccctaaaataattgaaagga------------------------------------------------------------------------tcagag i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737573 1146 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=727457.000000 s hg38.chrUn_KI270749v1 54309 71 + 158759 gcacaaaacgtaattcaaagagtttacttgagccacaa--tgaggaca-gctgcctggaagaaacagacccaag s panTro5.chr1 101899683 71 - 228573443 gcacaaaacgtaattcaaagagtttacttgagccacaa--tgaggaca-gctgcctggaagaaacagacccaag i panTro5.chr1 C 0 C 0 s panPan2.chr7 108519404 71 - 162613886 gcacaaaacgtaattcaaagagattacttgagccacag--tgaggaca-gctgcctggaagaaacagacccaag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 34015 71 - 126596 gcacaaaacgtaattcaaagagtttacttgagccacaa--tgaggaca-gctgcctggaagaaacagacccaag i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55770117 71 + 99891981 gcacaaaacataattcaaagagtttacttgagccaaaa--tgaggaca-gctgcctggaagaaacagacccaag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133470400 71 - 185818997 gcacaaaacgtaattcaaagagtttacctgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300082 71 + 192294377 gcacaaaacgtaattcgaagagtttacctgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781997 71 + 3123512 gcacaaaacgtaattcaaagagtttacctgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2502643 71 + 10077455 gcacaaaacgtaattcaaagagtttacttgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708647 71 + 127223203 gcacaaaacgtaattcaaagagtttacttgagccaaaa--taaggaca-gctgcctggaagaaacagacccaag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175253 71 - 1799296 gcacaaaacgtaattcaaagagtttacttgagccaaaa--taagggca-gttgcctggaagaaacagacccaag i manLeu1.NW_012105809v1 I 6408 C 0 s colAng1.NW_012115910v1 1752476 71 + 6934359 GCACAAAAAGTAATTCaaagagtttacttgagccaaaa--taagctca-gctgcctggaagaaacagacccaag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111934 72 - 128169293 gcacaaaacataattcaaagagtttacttgagccaaaa--tgaggacaggctgcttgtaagaaacagacccaag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 729577 72 - 18371965 gcacaaaacataattcaaagagtttacttgagccaaaa--tgaggacaggctgcctgtaagaaacagacccaag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389148 72 + 3566421 gcacaaaacataattcaaagagtttacgtgagccaaaa--tgaggacaggctgcctgtaagaaacagacccagg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890947 72 - 9267652 gcacaaaatgtaattcaaagagtttacttgagccaaaa--tgaggacgggctgcctgtaagaaacagacccaag i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12748387 66 + 14340318 -------tcctggtttaatgagtttattcgagttaaaagctagaaatg-gccattcagaagtcacaagcttcag i otoGar3.GL873564 C 0 I 2362 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737573 1146 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=2157788.000000 s hg38.chrUn_KI270749v1 54380 227 + 158759 tatccttggatatgaactccctttggagctttgcaacaagcagtttcttaaaggc----aaaaaagggtccagaagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacatttattagtgattggctatacactgttacactattattgggtgtggattatagtgtctggtgtggctttattggttaatttatagctactgtggtaacagc s panTro5.chr1 101899754 198 - 228573443 tatccttggatatgaacaccctttggagctttgtaacaagcagtttgttaaaggc----aaaaaagggtccagaagagggatgatgcaaagaggtttgtcacaaattctcattggcttatggaattaacatttatta-----------------------------ttgggtgtggattatagtgtctggtgtggggttattggttaatttatagctactgtggcaacagc i panTro5.chr1 C 0 C 0 s panPan2.chr7 108519475 227 - 162613886 tatccttggatataaactccatttggagctttgcaacaagcagtttcttaaaggc----aaaaaaggtacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattgccttatgggaataacattgattagtgactggctatacactgttaagctattattgggtgtggattatagtgtctggtgtggcattattggttaatttatagctactgtggcaacagc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 34086 227 - 126596 tatccttggatatgaactccctttggagctttgcaacaagcagtttcttaaaggc----aaaaaagggtccagaagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacatgtattagtgactggctatacactgttacactattattgggtgtggattatagtgtctggtgtggcgttattggttaatttatagctactgtggcaacagc i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55770188 225 + 99891981 tatccttggatatgaactccatttggagctttgcaacaagcagtttcttaaaggc----aaaaaagggacaag--gtgggatgatacaaagaggtttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttaagctgttattgggtgaggattatagtgtctggtgtggcattgttggttaatttatagctactatggcaacagc i nomLeu3.chr17 C 0 I 1 s rheMac8.chr3 133470471 227 - 185818997 tattcttggatattaactccatttggagttttgcaacaagcagtttcttaaaggc----tgaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggctcatggaaataacattgattagtgactggctatacactgttatgctgttattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagc i rheMac8.chr3 C 0 I 1 s macFas5.chr3 67300153 227 + 192294377 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----tgaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggctcatggaaataacattgattagtgactggctatacactgttatgctgttgttgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagc i macFas5.chr3 C 0 I 1 s macNem1.NW_012011522v1 2782068 227 + 3123512 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----tgaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctgttattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagc i macNem1.NW_012011522v1 C 0 I 1 s cerAty1.NW_012000909v1 2502714 227 + 10077455 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagc i cerAty1.NW_012000909v1 C 0 I 1 s chlSab2.chr21 5708718 227 + 127223203 tattcttggatatgaactccatttggcgttttgcaacaagcaatttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggcttggcattattgattaatttatagctactgtggcaacctc i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012105809v1 1175324 227 - 1799296 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagagatttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagc i manLeu1.NW_012105809v1 C 0 I 1 s colAng1.NW_012115910v1 1752547 227 + 6934359 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcactggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggcgtggcattattgattaatttatgactactgtggcaacagc i colAng1.NW_012115910v1 C 0 I 1 s calJac3.chr8 108112006 227 - 128169293 tatccttggatatgaactccatttgcagctttactgaaagcaggttcttaaaggc----aaaaaggagacaaggagtggggtgatgcaaagatgtttgtcacaaattctcattggcttatggaaataacattgattagtgactgactatacactgttaagctattatagggtgtggattatagtgtctggtgtggcattattagttaatttatagctactgtggcaacagc i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 729649 228 - 18371965 tacccttggatatgaactctgtttgcagctttgctacaaggaggttcttaaaagcaaaaaaaaaagggacaaggagtggggtaatgcaaa---gtttgtcagaaattctcattggcttacggaaatagcattgattagcgactggctatacactgtcaagctattataggatatggattatagtgtctggtgtggcattattggttaacttatagctactatggcaacagc i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 1389220 226 + 3566421 tatccttggatatgaactccgtttgcagcttggctacaagcaggctcttaaaggc----aaacaagggacaaggagtggggtgatgcaaagaggtttgtcagaaattctcattggcttatggaaatagcattgattagtgactggctatacactgttaagcta-catagggtatggattatagtgtctggggtgacattattggttaatttatagctactgtggcaacagc i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 1891019 227 - 9267652 tatccttggatatgaactccatttgcagctttgctacaagcaggttcttaaaggc----aaaaaagggacaaggagtggggtgatgcaaagtggtttgtcagaaattctcattggcttacggaaataacattgattagtgactggctatacactgttaagctattatagggtgtggattatagtgtctggtgtggcattattggttaatttatagctactgtggcaacagc i aotNan1.NW_018514471v1 C 0 I 1 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66737573 1146 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12748453 2362 + 14340318 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=10424.000000 s hg38.chrUn_KI270749v1 54607 1 + 158759 g s panTro5.chr1 101899952 1 - 228573443 a i panTro5.chr1 C 0 I 1 s panPan2.chr7 108519702 1 - 162613886 a i panPan2.chr7 C 0 I 1 s gorGor5.CYUI01000522v1 34313 1 - 126596 a i gorGor5.CYUI01000522v1 C 0 I 1 s ponAbe2.chrUn 66738719 1 - 72422247 a i ponAbe2.chrUn I 1146 I 521 s nomLeu3.chr17 55770414 1 + 99891981 a i nomLeu3.chr17 I 1 C 0 s rheMac8.chr3 133470699 1 - 185818997 a i rheMac8.chr3 I 1 C 0 s macFas5.chr3 67300381 1 + 192294377 a i macFas5.chr3 I 1 C 0 s macNem1.NW_012011522v1 2782296 1 + 3123512 a i macNem1.NW_012011522v1 I 1 C 0 s cerAty1.NW_012000909v1 2502942 1 + 10077455 a i cerAty1.NW_012000909v1 I 1 C 0 s chlSab2.chr21 5708946 1 + 127223203 a i chlSab2.chr21 I 1 C 0 s manLeu1.NW_012105809v1 1175552 1 - 1799296 a i manLeu1.NW_012105809v1 I 1 C 0 s colAng1.NW_012115910v1 1752775 1 + 6934359 a i colAng1.NW_012115910v1 I 1 C 0 s calJac3.chr8 108112234 1 - 128169293 a i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 729878 1 - 18371965 a i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1389447 1 + 3566421 a i cebCap1.NW_016107540v1 I 1 C 0 s aotNan1.NW_018514471v1 1891247 1 - 9267652 a i aotNan1.NW_018514471v1 I 1 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12748453 2362 + 14340318 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=1327319.000000 s hg38.chrUn_KI270749v1 54608 138 + 158759 gcagcctagatgaacacacatctcaaagaggagcaggacagaactgc-tgtctcatttgaatatctctctgggcctgattatttcaaaggacttgcatttctcatatgaaagttattttcttttctcaA---GGTCCATAAA s panTro5.chr1 101899954 138 - 228573443 gcagcctagatgaacacacagctcaaagaggagcaggacagaattgc-tgtctcatttgaatatctctctggacctgattatttaaaaggacttgcatttctcacatgaaagttattttcttttctcaA---TGTCCATAAA i panTro5.chr1 I 1 C 0 s panPan2.chr7 108519704 138 - 162613886 gcagcctggatgaatacacagctcaaagaggagtagggcacaactgc-tgtctcattttaatatctctctgggcctgattatttaaaaggacttgcatttctcacataaaagttactttcttttctcaA---TGTCAATAAA i panPan2.chr7 I 1 C 0 s gorGor5.CYUI01000522v1 34315 138 - 126596 gcagcctagatgaacacacagctcaaagaggagcaggacagaactgc-tgtctcatttgaatatctctctgggcctgattatttaaaaggacttgcatttctcacatgaaagttattttcttttctcaA---TGTCCATAAA i gorGor5.CYUI01000522v1 I 1 C 0 s nomLeu3.chr17 55770415 139 + 99891981 gcagcctggatgaacacacagctcaaagaggagtagggcacaactgcttgtctcattttaatatctctctgggcctgattgtttaaaaggacttgcatttctcacataaaagttactttcttttctcaG---TGTCAATAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133470700 138 - 185818997 gcagcctagatgaatacacagctcaaagaggagttgggcacgactgc-tgtctcattttaatatctctctgggcctgattatttaaaaggactagcatttctcacatagaagttattttattttctcaA---TGTCAATAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300382 138 + 192294377 gcagcctagatgaatacacagctcaaagaggagttgggcacgactgc-tgtctcattttagtatctctctgggcctgattatttaaaaggactagcatttctcacatagaagttattttattttctcaA---TGTCAATAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782297 138 + 3123512 gcagcctagatgaatacacagctcaaagaggagttgggcacgactgc-tgtctcattttaatatctctctgggcctgattatttaaaaggactagcatttctcacatagaagttattttattttctcaA---TGTCAATAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2502943 138 + 10077455 gcagcctagatgaatacacagctcaaagaggagtcgggcacgactgc-tgtctcattttaatatctctctgggcctgattatttaaaaggactagcatttctcacataaaagttattttattttctcaA---TGTCAATAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708947 138 + 127223203 gcagcctagatgaatacacagctcaaagaggagtcaggcacgactgc-tgtctcattttaatatctctctgggcctgattatttaaaaggacttgcatttctcacataaaagatattttattttctcaA---TGTCAATAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175553 138 - 1799296 gcagcctagatgaatacacagctcaaagaggagttgggcacgactgc-tgtctcattttaatatctctctgggcctgattatttaaaaggactagcatttctcacataaaagttattttattttctcaA---TGTCAATAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1752776 138 + 6934359 gcagcctagatgaatacacagctcaaagaggagtcgggcacgactgc-tgtctcattttactatctctctgggcctgattatttaaaaggacttgcatttctcacataaaagttattttattttctcaT---TGTCAGTAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112235 138 - 128169293 gcagcctggatgaatacacagctcaaagaggagtgggacctgacttc-tgtctcattttaatatcactctgggcctgattatttgaaaggacttgcatttctcacataaaggttattttcttttctcaG---TGTCAATAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 729879 138 - 18371965 gcagcctggatgaatacacagctcaaagaggagtaggacctgacttc-ggtctcattttaatgtcactctaggcctgattatttaaaaggacttgaatttctcacataaaagttattttcttttctcaA---TGTCAATAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389448 139 + 3566421 gcaacctggatgaatacacagctcaaagaggagtaggacctgacgtc-tgtctcattttaatatcactctgggcctgattatttaaaaggacttgcatttctcacat--atgttattttctttcctcaGACATGTCAATAAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891248 138 - 9267652 gcagcctggatgaatacgcagctcaaagaggagcaggacctgacttc-tgtctcattttaatatcactctgggcctgattatttaaaaggacttgcatttctcacataaaagttattttcttttttcaA---TGTCAATAAA i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66738720 521 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12748453 2362 + 14340318 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=1753825.000000 s hg38.chrUn_KI270749v1 54746 171 + 158759 TGAGAATAAATAGAT-GTAAAATAGATCTTTTTGAGGATGAAGTAAATGGAATGATAAACAAAACCCAAGCTGGCCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATGGATTTTTCAAAGTG--ATGTTAAGCTATTAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCT s panTro5.chr1 101900092 171 - 228573443 TGAGAATAAATAGAC-GTAAAATAGATCTTTTCGAGGATGAAGTAAATGGAATGAAAAACAAAACCCAAGCTGACCAGAAATCATAAAGGGAAGAAAAGGTTATAAATAAATGGATTTTTCAATGTG--ATTTTAAGCTATTAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108519842 171 - 162613886 TGAGAATAAATAGAC-ATAAAATAGATCTTTTCCAAGATGAAGTAAATGGAGTAAAAAACAAAACCCTAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATTTTTCAAAGTG--ATGTTAAGCTATTAGGAATCAGTTAAATGTTGGCGGA-TTTTGTCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 34453 171 - 126596 TGAGAATAAATAGAC-GTAAAATAGATCTTTTCGAGGATGAAGTAAATGGAATGAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATGGATTTTTCAAAGTG--ATTTTAAGCTATTGGGAATCAGTTAAATGTTGGGGGA-TTTTGTCT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55770554 171 + 99891981 TGAGAATAAATAGAC-ATAAAATAGATCTTTTCGAGGATGAAGTAAATGGAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAATTATATAGATTTTTCAAAGTG--ATGTTAACCTATCAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133470838 171 - 185818997 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300520 171 + 192294377 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAAGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782435 171 + 3123512 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503081 171 + 10077455 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATATTAAGCTACCAGGAATCAGTTAAATGTTGGGGAA-TTTTGCCT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709085 171 + 127223203 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175691 171 - 1799296 TGAGAATAAATAGAC-ATAAAATAGATCTTTTTGAGGATTAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATGATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATTATAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1752914 171 + 6934359 TGAGAATAGATAGAC-ATAAAATAGATCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGATTATAAATATATAGATTTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAACGTTGGGGGA-TTTTGCCT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112373 172 - 128169293 TGAAAATAAAGGGAC-AAAAAATAGATCTTTTCAAGGATGAGGTAAATGGAGTAATAAACAAAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGCTGTAAATATATAGATTTTCCAAAATG--ATATTAAGCTATCAGGAATCAGTTAAATGTTCGGGGATTTTTGCCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730017 171 - 18371965 TGAAAATAAAGGGAC-AAAAAATAGATCTTTTTGAGGATGAAGTAAATGGAGTAATAAACAAAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGTTGTAAATATATAGATTTTCCAAAATG--ATATTAAGCTATCAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389587 171 + 3566421 TGAAAATAAAGGGACAAAAAAATAGATCTTTTCGAGGATGAAGTAAATGGAGTAATAAAC-AAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGCTGTAAATATATAGATTTTCCAAAATG--ATATTAAGCTATCCGGAATCAGTTAAATGTTGGGGTA-TTTTGTCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891386 174 - 9267652 TGAAAATAAAGGGACGAAAAAATAGATCTTTTTGAGGATGAAGTAACTAGAGTAACAAACAAAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGCTGTAAATATATAGATTTTCCAAAATGATATATTAAGCTATCAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12750815 164 + 14340318 TGAGAAGAAATAAAC-ATAAAACACCTATTTTCTAGGATCAAGTAAGTGGAG---AAAACAAAATCTAAGCTGACCAGAAATTATAACATGGAAACAAAGTCAAAAAGATATAA--TTTAAAAGGGA--ATCTTAAACTATAAAATATCAAGTAGA--TTTGGGGA-TTTTTTTT i otoGar3.GL873564 I 2362 I 968 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66738720 521 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=1536127.000000 s hg38.chrUn_KI270749v1 54917 166 + 158759 GAGAATgggctaaaggagaatgtcccttttgccttctgaagtttccctgaaaatc-actaataggaggcagataaatagtagaaaaggca-----tacaggtttctgcaatgtgtgtacactggagcccttagaatgaagacccaga-------cacacgatgcatgcagaagcttatc s panTro5.chr1 101900263 166 - 228573443 GAGAATgggctaacggagaatgtcccttttgccttctgaagtttccctgaaaatc-actaataggaggcagataaatagtagaaaaggca-----tacaggtttctgcaatatgtgtacactggagcccttagaacgaagacccaga-------cacacgatgcgtgcagaagcttttc i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520013 166 - 162613886 GAgtatgggctaaaggagaatgtcccttttgccttctgaagtttccctgaaaatc-accaacaggaggcagataaatagtagaaaaggca-----tacaggtttctgcaatgtgtgtacactggagcccttagaatgaagaccgaga-------cacacgatgggtgcagaagcttatt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 34624 166 - 126596 GAGAATgggctaaaggagaatgtcccttttgccttctgaagtttccctgaaaatc-actaataggaggcagataaatagtagaaaaggca-----tacaggtttctgcaatgtgtgtacactggagcccttagaacgaagacccaga-------cacacgatgcgtgcagaagcttatc i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55770725 163 + 99891981 GGgtataggctaagggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaa---tagaaaatgta-----tacagctttctgcaatgtgtgtacactggagcccttagaatgaagacccaga-------cacatgatgggtgccgaagcttatt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471009 173 - 185818997 GGgtatgggctaagggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300691 173 + 192294377 GGgtatgggctaagggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782606 173 + 3123512 GGgtatgggctaagggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaagcct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503252 173 + 10077455 GGgtatgggctaagggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709256 173 + 127223203 GGgtatgggctaagggagaatgtcccttttgccttctgaagattccctgaaaatc-aataacaggaggcagataaatagtagaaaaggca-----tacaggcttctgtaatgtgtgtaccctggagcccatagaatgaagacccaggacccagtcacacggtgggtacagaagcttatc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175862 173 - 1799296 GGgtatgggctaagggagaatgtaccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753085 173 + 6934359 GGgtatgggctaagggagaatgttcattttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggca-----tacagttttccgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacatggtgggtgcagaagcttatc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112545 167 - 128169293 GGgtatgggttaagggagaatgttcattttgccttctgaagtttccctgaaaatcatctgaaaggaggcagatgaatagcagaaaaagca-----tacaggtttctgtaatgtgtgtatgtgggggccctcagaatgaagacccaac-------cacatgatggatacagaagctaatc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730188 166 - 18371965 GGgtatgggttaagggagaatgtcccttttgccttctgaagtttccctgaaaatc-tttgacaggaggcagataaatagcagaaaaggct-----ttcaggtttctgtaatgtgtgtatgtgggggccctcagaatgaagacccagc-------cacgtgatgggtacagaagctaatc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389758 171 + 3566421 GGCtatgggttaggggagaatgtcccttttgccttctgaagtttccctgaaaatc-actgacaggaggcagataaatagcagaaaaggcatacagtacaggtttctgtaatgtgtgtatgtaggggccctcagaatgaagactcagc-------cacatgatgggtacagaagctaatc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891560 164 - 9267652 GAgtatgggttaagggagaatgtcccttttgccttctgaagattccctgaaaatc---agacaggaggcagataaatagcaggaaagtca-----tacaggtttctgtaacgtgtgtatgtgggggccctcagaatgaagacccagc-------cacatgatgggtacagaagctaatc i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66738720 521 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e otoGar3.GL873564 12750979 968 + 14340318 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=216062.000000 s hg38.chrUn_KI270749v1 55083 24 + 158759 taccacatgaagtttacagaaaga s panTro5.chr1 101900429 24 - 228573443 taccacatgaagtttacaaaaaga i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520179 24 - 162613886 gaccacactgagtttacagaaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 34790 24 - 126596 taccacatgaagtttacagaaaga i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55770888 24 + 99891981 gaccacatcgagtttacagaaaga i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471182 24 - 185818997 taccatactgagtttacagaaaga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300864 24 + 192294377 taccatactgagtttacagaaaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782779 24 + 3123512 taccatactgagtttacagaaaga i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503425 24 + 10077455 taccatattgagtttacagaaaga i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709429 24 + 127223203 taccacattgagtttatagaaaga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1176035 24 - 1799296 taccacattgagtttacagaaaga i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753258 24 + 6934359 taccacactgagtttacagaaaga i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112712 24 - 128169293 taccacgctgaagttacagaaaga i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730354 24 - 18371965 cactccgctgaagttacagaaaga i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389929 24 + 3566421 tacaacgctgaagtgacagaaaga i cebCap1.NW_016107540v1 C 0 I 22 s aotNan1.NW_018514471v1 1891724 24 - 9267652 taccacactgaagttacagaaaga i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12751947 24 + 14340318 taccatcttgaggatgcagaaaga i otoGar3.GL873564 I 968 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66738720 521 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=146678.000000 s hg38.chrUn_KI270749v1 55107 21 + 158759 atggggtcttggatcacag----gg s panTro5.chr1 101900453 21 - 228573443 atggggtcttggatcacag----gg i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520203 21 - 162613886 atgggggcttggatcatag----gg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 34814 21 - 126596 atggggtcttggatcacag----gg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55770912 21 + 99891981 ataggggcttggatcacag----gg i nomLeu3.chr17 C 0 I 2 s rheMac8.chr3 133471206 21 - 185818997 atggggacttggatcacag----aa i rheMac8.chr3 C 0 I 2 s macFas5.chr3 67300888 21 + 192294377 atggggacttggatcacag----aa i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 2782803 22 + 3123512 atggggacttggatcacaga---aa i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 2503449 25 + 10077455 atggggacttggatcacagaaagaa i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 5709453 19 + 127223203 ttggggacttggatcacag------ i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1176059 21 - 1799296 atggggacttggatcacag----aa i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 1753282 21 + 6934359 atggggacttggatcacag----aa i colAng1.NW_012115910v1 C 0 I 2 s calJac3.chr8 108112736 21 - 128169293 atggggacttagatcaccg----gg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730378 21 - 18371965 atgggggcttagatcaccg----ga i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1891748 21 - 9267652 atgggggcttagatcacca----ga i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12751971 20 + 14340318 acaaaggcttggatcctgg----c- i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66738720 521 - 72422247 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e cebCap1.NW_016107540v1 1389953 22 + 3566421 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=34131.000000 s hg38.chrUn_KI270749v1 55128 5 + 158759 aaaat- s panTro5.chr1 101900474 5 - 228573443 gaaaa- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520224 5 - 162613886 ggaaa- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 34835 5 - 126596 aaaaa- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66739241 5 - 72422247 aaaaa- i ponAbe2.chrUn I 521 I 336 s nomLeu3.chr17 55770935 5 + 99891981 aaaaa- i nomLeu3.chr17 I 2 C 0 s rheMac8.chr3 133471229 5 - 185818997 aaaaa- i rheMac8.chr3 I 2 C 0 s macFas5.chr3 67300911 5 + 192294377 aaaaa- i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 2782827 5 + 3123512 aaaaa- i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 2503476 5 + 10077455 aaaaa- i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 5709472 3 + 127223203 --aaa- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1176082 5 - 1799296 aaaaa- i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 1753305 5 + 6934359 aaaaa- i colAng1.NW_012115910v1 I 2 C 0 s calJac3.chr8 108112757 5 - 128169293 aaaaa- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730399 5 - 18371965 aaaaa- i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1891769 5 - 9267652 aaaaa- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12751991 5 + 14340318 aaa-ac i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1002039 26434 - 1121937 I e cebCap1.NW_016107540v1 1389953 22 + 3566421 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=11270.000000 s hg38.chrUn_KI270749v1 55133 2 + 158759 at s panTro5.chr1 101900479 2 - 228573443 aa i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520229 2 - 162613886 aa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 34840 2 - 126596 aa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55770940 2 + 99891981 aa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471234 2 - 185818997 aa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300916 2 + 192294377 aa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782832 2 + 3123512 aa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503481 2 + 10077455 aa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709475 2 + 127223203 aa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1176087 2 - 1799296 aa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753310 2 + 6934359 aa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112762 2 - 128169293 aa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730404 2 - 18371965 aa i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1891774 2 - 9267652 aa i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 1028473 1 - 1121937 -a i tarSyr2.KE946558v1 I 26434 I 2762 s otoGar3.GL873564 12751996 1 + 14340318 a- i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739246 336 - 72422247 I e cebCap1.NW_016107540v1 1389953 22 + 3566421 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=14906.000000 s hg38.chrUn_KI270749v1 55135 13 + 158759 aa-aaag---gttatgt------ s panTro5.chr1 101900481 14 - 228573443 aagaaag---gttatgt------ i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520231 11 - 162613886 ---aaag---gttatgt------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 34842 12 - 126596 a--aaag---gttatgt------ i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55770942 13 + 99891981 aa-aaaa---gttatgt------ i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471236 13 - 185818997 aa-aaag---attatga------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300918 13 + 192294377 aa-aaag---attatga------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782834 13 + 3123512 aa-aaag---attatga------ i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503483 13 + 10077455 aa-aaag---gttatga------ i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709477 13 + 127223203 aa-aaag---attatga------ i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1176089 13 - 1799296 aa-aaag---gttatga------ i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753312 16 + 6934359 aa-acggggagttatga------ i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112764 6 - 128169293 ag-gtag---------------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730406 9 - 18371965 aa-aaag---ata---------- i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1891776 9 - 9267652 aa-agat---aga---------- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12751997 14 + 14340318 ------g---gttataggacaga i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739246 336 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e cebCap1.NW_016107540v1 1389953 22 + 3566421 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=1964767.000000 s hg38.chrUn_KI270749v1 55148 209 + 158759 gagaaaacga-ccctggctagcaacagtggacttattacataggtggaacctcactgggagcagtcctcagagagaatagac------agaaaatgtttctttcagacctttggagacctcagactctcagttaacccttcctagatccagacaaggggttagaactcagagaaagcctggctgcatcaaggcagactctctaacggtgcaaatct s panTro5.chr1 101900495 209 - 228573443 gagaaaacga-ccctggttagcaacagtggacttattacctaggtggaacctcactaggagcagtcctcagagagaatagac------agaaaatgtttctttcagacctttggagacctcagactctcagttaaactttcctagatccaaacaagggggcagacctcagagaaagcctggctgcatcaaggcagattctctactgatgcaaatct i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520242 192 - 162613886 gagaaaaaga-ccctggctagcaaca-----------------gtgaaacctcactgggagcagccctcagagagaacagac------agaaaatgtttctttcagacctttggagacctctgactctcagttaacctttcctacatccagacaagggggcagacctcagagaaagcctggctgcatcaaggcagattctctaccgatacaaatct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 34854 208 - 126596 gagaaaacga-ccctggctagcaacagtggacttattacataggtggaacctcactgggagcagtcctcagagagaatagac------agaaaatgtttctttcagacctttggagacctcagactctcagttaa-ctttcctagatccagacaagggggcagacctcagagaaagcctggctgcatcaaggcagattctctaccgatgcaaatct i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55770955 192 + 99891981 gagaaaaaga-ccctggctagcaaca-----------------gtgaaacctcactgggagcagccctccgagagaatagac------agaaaatgtttctttcagaccttcggagacctcagactctcagttaacctttcctagatccagccaagggggcagacctcagagaaagcctggctgcatcaaagcagattctctactgatacaaatct i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471249 215 - 185818997 gagaaaagga-ccttggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcggagagaacagatagaaaaagaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300931 215 + 192294377 gagaaaagga-ccttggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcggagagaacagatagaaaaagaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i macFas5.chr3 C 0 I 328 s macNem1.NW_012011522v1 2782847 215 + 3123512 gagaaaagga-ccttggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcggagagaacagatagaaaaagaaaatgtttctttcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503496 209 + 10077455 gagaaaagga-ccctggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcagagagaacagac------agaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709490 209 + 127223203 gacaaaagga-ccctggctagcaacagtggtcttgttacataggtgaaacttcactggaagtggccctcagagagaacagat------acaaaatgtttatctcagacctttggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctacagatggaaatct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1176102 209 - 1799296 gagaaaagga-ccctggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcagagagaacagac------agaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753328 209 + 6934359 gagaaaagga-ctctggctagcaacagtggttttggtacacagctgaaacttcactggaagtggccctcagacagaacagac------agaaaatgtttctctcagacctatggaagtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcctcaaggcagattctctacaggtgcaaatct i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112770 189 - 128169293 ---aaaagga-ccctgactagcaacagtggtcttgttacgtagatgaaatctcactgggagaa-----------------ac------agaaactgtttctttcagacctttagaggcttcagactctcagtttacctttcctagatccagacaaggggacagacctcagagaaagcctgggtgcatcaaaccagattctctacaggtacaaatct i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730415 209 - 18371965 gaaaaaagga-ccctaactagcaacagtggtcttgttacgtagatgaaatctcactgggagaagccctcagaggggatagac------agaaactgtttctttcagacctttagaggcttcagactctccatttacctttcctagaaccagacaaggggacagaccttggagaaagcctgggtgcatcaagtcagattctctacagctacaaatct i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389975 209 + 3566421 gggaaaagga-ccctgactagcaacagtggtcttgttgtgtagatgaaatctcactgggagaagccctcagaaaggatagac------agaaactgtttctttcagacctttagaggcttcagactctcattttacaattcctagatcctgaccaggggacagacctcagagaaagcctgggtgcatcaagccagattctctacaggtacaaatct i cebCap1.NW_016107540v1 I 22 C 0 s aotNan1.NW_018514471v1 1891785 209 - 9267652 gagaaaagga-ccctgactagcaacagtggtcttgttacgtagattaaatctcactgggagaagccctcagagaggatagac------agaaactgtttctttcagacctctagagacttcagactctcagtttacctttcctagatccagacaagaggacagacctcagagaaagcctgggtgcatcaagccagattctctacaggtacaaatct i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752011 204 + 14340318 gaaaagaggaggcctggctagcaaaggtggtctttttata-aaatgaaagatcacaggtagcagccctcagaagg--tagat------gatatatgtttccttcagacctttaaaaatgtcagctcctcagctaaacttctccaggtct-gccaagggag--ggcctcagagaaaaccaggctacggcagagcaacctctctctggaggcaaatct i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739246 336 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=39472.000000 s hg38.chrUn_KI270749v1 55357 5 + 158759 cccca s panTro5.chr1 101900704 5 - 228573443 cccca i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520434 5 - 162613886 cccaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35062 4 - 126596 ccc-a i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771147 5 + 99891981 cccca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471464 5 - 185818997 ccctg i rheMac8.chr3 C 0 I 328 s macFas5.chr3 67301474 5 + 192294377 ccctg i macFas5.chr3 I 328 C 0 s macNem1.NW_012011522v1 2783062 5 + 3123512 ccctg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503705 5 + 10077455 ccctg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709699 5 + 127223203 ccctg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1176311 5 - 1799296 ccctg i manLeu1.NW_012105809v1 C 0 T 6035 s colAng1.NW_012115910v1 1753537 5 + 6934359 ccccg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112959 5 - 128169293 cccca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730624 5 - 18371965 cccca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390184 5 + 3566421 cccca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891994 5 - 9267652 cccca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752215 5 + 14340318 cccca i otoGar3.GL873564 C 0 I 4 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739246 336 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=81361.000000 s hg38.chrUn_KI270749v1 55362 8 + 158759 agacagct s panTro5.chr1 101900709 8 - 228573443 agacagct i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520439 8 - 162613886 agacagct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35066 8 - 126596 agacagct i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771152 8 + 99891981 agacagct i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471797 8 - 185818997 agacagct i rheMac8.chr3 I 328 C 0 s macFas5.chr3 67301479 8 + 192294377 agacagct i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783067 8 + 3123512 agatagct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503710 8 + 10077455 agacagct i cerAty1.NW_012000909v1 C 0 I 316 s chlSab2.chr21 5709704 8 + 127223203 agacagct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170281 8 - 1799296 agacagcg i manLeu1.NW_012105809v1 T 6035 C 0 s colAng1.NW_012115910v1 1753542 8 + 6934359 agacagct i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112964 8 - 128169293 agagagtt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730629 8 - 18371965 agagagct i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390189 8 + 3566421 agagagct i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891999 8 - 9267652 agagagtt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752224 8 + 14340318 agacaact i otoGar3.GL873564 I 4 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739246 336 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=24752.000000 s hg38.chrUn_KI270749v1 55370 2 + 158759 tt s panTro5.chr1 101900717 2 - 228573443 tt i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520447 2 - 162613886 tt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35074 2 - 126596 tt i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771160 2 + 99891981 tt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471805 2 - 185818997 tt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301487 2 + 192294377 tt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783075 2 + 3123512 tt i macNem1.NW_012011522v1 C 0 I 328 s cerAty1.NW_012000909v1 2504034 2 + 10077455 tt i cerAty1.NW_012000909v1 I 316 C 0 s chlSab2.chr21 5709712 2 + 127223203 tt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170289 2 - 1799296 tt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753550 2 + 6934359 tt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112972 2 - 128169293 tt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730637 2 - 18371965 tt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390197 2 + 3566421 tt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892007 2 - 9267652 tt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752232 2 + 14340318 tt i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739246 336 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=52500.000000 s hg38.chrUn_KI270749v1 55372 5 + 158759 gcagc s panTro5.chr1 101900719 5 - 228573443 gcagc i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520449 5 - 162613886 gcagc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35076 5 - 126596 gcagc i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771162 5 + 99891981 gcagc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471807 5 - 185818997 gcagc i rheMac8.chr3 C 0 I 3 s macFas5.chr3 67301489 5 + 192294377 gcagc i macFas5.chr3 C 0 I 3 s cerAty1.NW_012000909v1 2504036 5 + 10077455 gcagc i cerAty1.NW_012000909v1 C 0 I 3 s chlSab2.chr21 5709714 5 + 127223203 gcagc i chlSab2.chr21 C 0 I 18 s manLeu1.NW_012105809v1 1170291 5 - 1799296 gcagc i manLeu1.NW_012105809v1 C 0 I 3 s colAng1.NW_012115910v1 1753552 5 + 6934359 gcagc i colAng1.NW_012115910v1 C 0 I 3 s calJac3.chr8 108112974 5 - 128169293 gcagc i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 730639 5 - 18371965 gcagc i saiBol1.JH378145 C 0 I 3 s cebCap1.NW_016107540v1 1390199 5 + 3566421 gcagc i cebCap1.NW_016107540v1 C 0 I 3 s aotNan1.NW_018514471v1 1892009 5 - 9267652 gcagc i aotNan1.NW_018514471v1 C 0 I 3 s otoGar3.GL873564 12752234 5 + 14340318 taagc i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739246 336 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e macNem1.NW_012011522v1 2783077 328 + 3123512 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=-17413.000000 s hg38.chrUn_KI270749v1 55377 4 + 158759 ---taag s panTro5.chr1 101900724 4 - 228573443 ---taac i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520454 4 - 162613886 ---tatt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35081 3 - 126596 ---taa- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771167 4 + 99891981 ---tatt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471815 1 - 185818997 ---t--- i rheMac8.chr3 I 3 C 0 s macFas5.chr3 67301497 1 + 192294377 ---t--- i macFas5.chr3 I 3 C 0 s cerAty1.NW_012000909v1 2504044 1 + 10077455 ---t--- i cerAty1.NW_012000909v1 I 3 C 0 s manLeu1.NW_012105809v1 1170299 1 - 1799296 ---t--- i manLeu1.NW_012105809v1 I 3 C 0 s colAng1.NW_012115910v1 1753560 1 + 6934359 ---t--- i colAng1.NW_012115910v1 I 3 C 0 s calJac3.chr8 108112982 1 - 128169293 ---t--- i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 730647 1 - 18371965 ---t--- i saiBol1.JH378145 I 3 C 0 s cebCap1.NW_016107540v1 1390207 1 + 3566421 ---t--- i cebCap1.NW_016107540v1 I 3 C 0 s aotNan1.NW_018514471v1 1892017 1 - 9267652 ---t--- i aotNan1.NW_018514471v1 I 3 C 0 s otoGar3.GL873564 12752239 4 + 14340318 tatt--- i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739246 336 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e macNem1.NW_012011522v1 2783077 328 + 3123512 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I e chlSab2.chr21 5709719 18 + 127223203 I a score=159360.000000 s hg38.chrUn_KI270749v1 55381 14 + 158759 tttgcatttccagc s panTro5.chr1 101900728 14 - 228573443 tttgcatttccagc i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520458 14 - 162613886 tttgcatttccagc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35084 14 - 126596 tttgcatttccagc i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771171 14 + 99891981 tttgcatttccagc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471816 14 - 185818997 tttgcatttccagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301498 14 + 192294377 tttgcatttccagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783405 14 + 3123512 tttgcatttccagc i macNem1.NW_012011522v1 I 328 C 0 s cerAty1.NW_012000909v1 2504045 14 + 10077455 tttgcatttccagc i cerAty1.NW_012000909v1 C 0 C 0 s manLeu1.NW_012105809v1 1170300 14 - 1799296 tttgcatttccagc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753561 14 + 6934359 tttgcatttccagc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112983 14 - 128169293 tttgcatttccagc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730648 14 - 18371965 tttgcatttccagc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390208 14 + 3566421 tttgcatttccagc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892018 14 - 9267652 tttgcatttccagc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752243 14 + 14340318 tttgcatttccagc i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739246 336 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I e chlSab2.chr21 5709719 18 + 127223203 I a score=310244.000000 s hg38.chrUn_KI270749v1 55395 34 + 158759 ccttctcaatagtcattttgaaatatatcaagga s panTro5.chr1 101900742 34 - 228573443 ccttctcaatagccattttgatatatatcaagga i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520472 34 - 162613886 ccttctgaatagccgttttgaaatatatcaagga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35098 34 - 126596 ccttctcaatagccattttgaaatatatcaagga i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771185 34 + 99891981 ccttctgaatagccattttgaaatatatcaagga i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471830 32 - 185818997 -cctctgaatagcca-tttgaaatatatcaagga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301512 32 + 192294377 -cctctgaatagcca-tttgaaatatatcaagga i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783419 31 + 3123512 -cctctgaatagcca-tttgaaa-atatcaagga i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504059 32 + 10077455 -cctctgaatagcca-tttgaaatatatcaagga i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709737 33 + 127223203 ccttctgaatagcca-tttgaaatatatcaagga i chlSab2.chr21 I 18 C 0 s manLeu1.NW_012105809v1 1170314 32 - 1799296 -cctctgaatagcca-tttgaaatatatcaagga i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753575 32 + 6934359 -cctctgaagagcca-tttgaaatatatcaagga i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112997 34 - 128169293 ccttctgaatagccattttgaaatatgtcaagga i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730662 34 - 18371965 ccttctgaatagccattttgaaatatgccaagga i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390222 30 + 3566421 cccc----atagtcattttgaaatatgtcaagga i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892032 34 - 9267652 ccttctgaatagccactttgaaataggtcaagga i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752257 34 + 14340318 ccttctgaatagctgacttgaaatatgtcaagga i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739246 336 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e canFam3.chr18 51761325 1320 - 55844845 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=809008.000000 s hg38.chrUn_KI270749v1 55429 85 + 158759 aatatatttag----ggg--------------------------------------------------------------------------taaaatatattagtttccttcaTACAGCTATAAAACATACAGCAATAA----TTTTTGTCAATGTCTA-CTACAAA s panTro5.chr1 101900776 85 - 228573443 aatatatttag----ggg--------------------------------------------------------------------------taaaatatattagtttccctcaTACAGCTATAAAACCTACAGGAATAA----TTTTTGTCAATGTCTA-CTACAAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520506 85 - 162613886 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattggtttcattcaTACAGCTATAAAACATAGAGAAATAA----TTTTTGTCAGTGTCTA-CTACAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35132 85 - 126596 aatatatttag----ggg--------------------------------------------------------------------------taaaatatattagtttccctcaTACAGCTATAAAACATACAGGAATAA----TTTTTGTCAATGTCTA-CTACAAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771219 85 + 99891981 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCTATGAAACATAAAGAAATAA----TTTGTGTCAATGTCTA-Ctacaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471862 85 - 185818997 aacatattttg----ggg--------------------------------------------------------------------------taaaatatgttgatttccttcaTACAGCTATAAAACATAAAGAAATAA----TTTTTGTCAATATCTA-CTACAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301544 85 + 192294377 aacatattttg----ggg--------------------------------------------------------------------------taaaatatgttgatttccttcaTACAGCTATAAAACATAAAGAAATAA----TTTTTGTCAATATCTA-CTACAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783450 83 + 3123512 aacata-tttg----ggg--------------------------------------------------------------------------taaaatatgttgattt-cttCATACAGCTATAAAACATAAAGAAATAA-----TTTTGTCAATATCTACCTACAGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504091 85 + 10077455 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCCATAAAACATAAAGAAATAA----TTTTTGTCAATATCTA-TTACAGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709770 85 + 127223203 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCTATAAAACATAGAGAAATAA----TTTTTGTCAATATCTA-CTACAGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170346 85 - 1799296 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCCATAAAACATAAAGAAATAA----TTTTTGTCAATATCTA-CTACGGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753607 85 + 6934359 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCTATAAAACATAGAGAAATAA----TTTTTGCCAATATCTA-CTACAGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113031 85 - 128169293 aatattttttg----ggg--------------------------------------------------------------------------tgaaatatattggttttcttcaTACAGCTATAAAACATAGACATATAA----TTTTTGTTAATATCTT-CTACAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730696 81 - 18371965 aatatatttta----ggg--------------------------------------------------------------------------tgaaatatattggtcttcttcaTACAGCTATAAAACATAA----ATAA----TTTTTGTTAATATCTT-CTACAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390252 85 + 3566421 aatatatttta----ggg--------------------------------------------------------------------------tgaaatatattggttttcttcaTACAGCTATAAAACATAGATAAATAA----TTTTTGTTAATATCTT-CTACAAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892066 85 - 9267652 aatatatttta----ggg--------------------------------------------------------------------------tgaaatatattggttttcttGATACAGCTATAAAACATAGATAAATAA----TTTTTGTTAATATCTT-CTACAAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752291 157 + 14340318 aatacattttg----gggtgaaatattttTTTTTATTGAATGGTAACTATGTACATTAATGCACTTCTGGGGTACAGTGTGGGGTTTTCACATGAAATATTTTGGTTTGCTTCATATGGCTATTGAATATACAGAATT------TTCTCGCCAATTTTCA-ATACAGT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51762645 92 - 55844845 AAGATATTAAGAATCAGG--------------------------------------------------------------------------TAATGTATA-TATTTTTGGTTGTATGCTTAGAGAACATAGAGAAATAATATTTTTTTGCTAATTCCTT-CTATAAA i canFam3.chr18 I 1320 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739246 336 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=15561.000000 s hg38.chrUn_KI270749v1 55514 1 + 158759 T s panTro5.chr1 101900861 1 - 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520591 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35217 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66739582 1 - 72422247 T i ponAbe2.chrUn I 336 I 558 s nomLeu3.chr17 55771304 1 + 99891981 t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471947 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301629 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783533 1 + 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504176 1 + 10077455 T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709855 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170431 1 - 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753692 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113116 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730777 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390337 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892151 1 - 9267652 T i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752448 1 + 14340318 T i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51762737 1 - 55844845 T i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=152996.000000 s hg38.chrUn_KI270749v1 55515 15 + 158759 CCAATATAGCAGTAA s panTro5.chr1 101900862 15 - 228573443 CCAATATAGCAGTAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520592 15 - 162613886 CCAATATAGCAGTAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35218 15 - 126596 CCAATATAGCAGTAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771305 15 + 99891981 ccaatatagcagtaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471948 15 - 185818997 CCAATATAGCAGTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301630 15 + 192294377 CCAATATAGCAGTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783534 14 + 3123512 CC-ATATAGCCAGTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504177 15 + 10077455 CCAATATAGCAGTAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709856 15 + 127223203 CCAATACAGCAGTAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170432 15 - 1799296 CCAATATAGCAGTAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753693 15 + 6934359 CCAATATAGCAGTAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113117 14 - 128169293 CCAGTATAGCAGTA- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730778 15 - 18371965 CCAATATAGCAGTAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390338 15 + 3566421 CCAATATAGCAGTAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892152 15 - 9267652 CCAATATAGCAGTAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752449 4 + 14340318 -----------Ataa i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51762738 15 - 55844845 CCAATATTGCAGTAA i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739583 558 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e dasNov3.JH578441 1194321 4121 + 1446996 I a score=333594.000000 s hg38.chrUn_KI270749v1 55530 33 + 158759 ATATAAAACCCACCAGATATTGAAGAAAAAATA s panTro5.chr1 101900877 33 - 228573443 TTATAAAACCCACCAGATATTGAAGAAAAAATA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520607 33 - 162613886 TTATAAAACCCACCAGATATTGAAGAAAAAATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35233 33 - 126596 TTATAAAACCCACCAGATATTGAAGAAAAAATA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771320 33 + 99891981 ttataaaacccaccagagattgaagaaataata i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471963 33 - 185818997 TTATAAAATCCACCAGATATTGAAGAAAAAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301645 33 + 192294377 TTATAAAATCCACCAGATATTGAAGAAAAAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783548 33 + 3123512 TGATAAAATCCACCAGATATTAAGAAAAAAATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504192 33 + 10077455 TTATAAAACCCACCAGATACTGAAGAAAAAATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709871 33 + 127223203 TTACAAAACCCACCAGATATTGAAGAAAAAATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170447 33 - 1799296 TTATAAAACCCACCAGATACTGAAGAAAAAATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753708 33 + 6934359 TTATAAAACCCACCAGATACTGAAGAAAAAATA i colAng1.NW_012115910v1 C 0 I 7 s calJac3.chr8 108113131 31 - 128169293 --ATAAAACCCAGCAGATATTGAAGAAAAAATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730793 33 - 18371965 ATATAAAACCCAGCAGATACTGAAGAAAAAATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390353 33 + 3566421 ATATAAAACCTAGAAGATACTGAAGAAAAAATA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892167 21 - 9267652 ATATAAAACTCAGC------------AAAAATA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752453 30 + 14340318 cattaaaacccaacaggtactgtaaaaaaa--- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51762753 33 - 55844845 TTATAAAATGTAACGGATATTATAAAAAATATA i canFam3.chr18 C 0 I 2 s dasNov3.JH578441 1198442 32 + 1446996 ATACAAAATA-GCCAGAGATTAGAGAAAAAAGA i dasNov3.JH578441 I 4121 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739583 558 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I a score=112178.000000 s hg38.chrUn_KI270749v1 55563 16 + 158759 ----TGTAGAGT---ACCTCAAT s panTro5.chr1 101900910 16 - 228573443 ----TGTAGAGT---ACCTCAAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520640 16 - 162613886 ----TGTAGAGT---ACATCACT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35266 16 - 126596 ----TGTAGAGT---ACCTCAAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771353 16 + 99891981 ----tgtagagt---acatcact i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133471996 16 - 185818997 ----TGTAGAGT---ATCTCACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301678 16 + 192294377 ----TGTAGAGT---ATCTCACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783581 13 + 3123512 ----TGTAGAGT---ATCTC--- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504225 13 + 10077455 ----TGTAGAGT---GTCTC--- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709904 13 + 127223203 ----TGTAGAGT---ATCTC--- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170480 16 - 1799296 ----TGTAGAGT---ATCTCACT i manLeu1.NW_012105809v1 C 0 C 0 s calJac3.chr8 108113162 16 - 128169293 ----TGTAGAGT---ACATCACT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730826 16 - 18371965 ----TGTAGAGT---ACATCACT i saiBol1.JH378145 C 0 I 2 s cebCap1.NW_016107540v1 1390386 16 + 3566421 ----TGTAGAGT---ACATCACT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892188 16 - 9267652 ----TGTAGAGT---ACATCACT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752483 19 + 14340318 ----tgcagagtaaaatatcact i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51762788 19 - 55844845 ----TGTAGAGTGCAATATGACT i canFam3.chr18 I 2 C 0 s dasNov3.JH578441 1198474 13 + 1446996 AATTAGTACAGT---A------- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739583 558 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e colAng1.NW_012115910v1 1753741 7 + 6934359 I a score=371470.000000 s hg38.chrUn_KI270749v1 55579 32 + 158759 TGCAAATGTTGATACT-----AAAATGCCAAATAAAA s panTro5.chr1 101900926 32 - 228573443 TACAAATGTTGATACT-----AAAAGGCCaaataaaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520656 32 - 162613886 TACAAATATTGATACT-----AAAATGCCAAATAAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35282 32 - 126596 TACAAATGTTGATACT-----AAAATGCCAAATAAAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771369 32 + 99891981 tacaaacattgatact-----aaaatgccaaataaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472012 32 - 185818997 TACAAATATTGATACT-----AAAATGCCAAATAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301694 32 + 192294377 TACAAATATTGATACT-----AAAATGCCAAATAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783594 30 + 3123512 -ACAAATATTGATACT------AAATGCCAAATAAAA i macNem1.NW_012011522v1 C 0 I 139 s cerAty1.NW_012000909v1 2504238 31 + 10077455 -ACAAATATTGATACT-----AAAATGCCAAATAAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709917 31 + 127223203 -ACAAATATTGATATT-----AAAATGCCAAATAAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170496 32 - 1799296 TACAAATATTGATACT-----AAAATGCCAAATAAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753748 32 + 6934359 TACAAATATTGATACT-----AAAATGCCAAATAAAA i colAng1.NW_012115910v1 I 7 C 0 s calJac3.chr8 108113178 37 - 128169293 TACAAATATTGATACTAAACTAAAATGCCAAATAAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730844 37 - 18371965 TACAAATATTGATACTAAACTAAAATGCCAAATAAAA i saiBol1.JH378145 I 2 C 0 s cebCap1.NW_016107540v1 1390402 36 + 3566421 TACAAATATTGATACTAAACTAAAATGCC-AATGCAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892204 37 - 9267652 TACAAATATTGATACTAAACTAAAATGCCAAATAAAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752502 32 + 14340318 tacaaatattgataca-----aaaaggcctgataaaa i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51762807 32 - 55844845 TATAAATATTTATACA-----AAAATGCCAAACAAAA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1198487 31 + 1446996 TGAAAGCACTTGTG-T-----AAAATACCAAATTAAA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739583 558 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I a score=1310770.000000 s hg38.chrUn_KI270749v1 55611 153 + 158759 TAAAAATAATTTCCAACAATATTTGAAACAGTAACACAAGA--AATTGGCCAAAAAAAAAATAAAACAAATATCCACCTTGGGGATGAAAGTGTGTT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATACTGATTAGCCCAAATTAAAAAT s panTro5.chr1 101900958 150 - 228573443 taaaaataatatacaacaatatTTGAAACAGTAAGACAAGA--AATTGGC---AAAAATAATAAAACAAATATCCACCTTGGGGATGAAAGTGTGTT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGCCCAAATTAAAAAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520688 145 - 162613886 TAAAAATAATCTCCAACAGTTTTTGAAACAGTAAGACAAGA--AATTAGC----AATAAAATAAAACAAATATCCACCTTGGGGATGAAAGTATCAT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGCCCAAAT----AAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35314 148 - 126596 TAAAAATAATATCCAACAATATTTGAAACAGTAAGACAAGA--AATTGGC----AAAAAAAAAAAACAAATATCCACCTTGGGGATGAAAGTGTGTT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAG-CCAAATTAAAAAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771401 145 + 99891981 taaaaataatctccaacaatatttgaaacagtaagacaaga--aattagc----aaaaaaata----aaatatccaccttggggatgaaagtgtgat--------------------tccaaatttggtaatccaataatattaataatc--atattgattagcccaaataaaaaat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472044 148 - 185818997 TAAAAATAATCTCCGACAATATTTGAAACAGTAAGACAAGA--AACT-GC----AAAACAATAAAGCAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGACCAAATAAAAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301726 148 + 192294377 TAAAAATAATCTCCGACAATATTTGAAACAGTAAGACAAGA--AACT-GC----AAAACAATAAAGCAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGACCAAATAAAAAAT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504269 148 + 10077455 TAAAAATAATCTCCAACAATATTTGAAACAGTAAGACAAGA--AACT-GC----AAAACAATAAAACAAATATCTACCTTGGGGATGAAAGTGTGAT--------------------TACAAATTTGGTAATCCAATAATATTAATAATC--ATATTCATTAGACCAAATAAAAAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709948 148 + 127223203 TAAAAATAATCTCCAACAGTATTTGAAACAGTAAGACAAGA--AACT-GC----AAAACAATAAAACAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------TCCAAATTTGGtaatccaatcatattaataatc--atattcatTAGACCAAATAAAAAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170528 148 - 1799296 TAAAAATAATCTCCAACAATATTTGAAACAGTAAGACAAGA--AACT-GC----AAAACAATAAAACAAATATCTACCTTGGGGATGAAAGTGTGAT--------------------TACAAATTTGGTAATCCAATAATATTAATAATC--ATATTCATTAGACCAAATAAAAAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753780 148 + 6934359 TAAAAATAATCTCCAACAACATCTGAAACAGTAAGACAAGA--AACT-GC----AAAACAATAAAACAAATATCTACCTTGGGGATGAAAGTATGAT--------------------TCCAAATTTGGtaatctaataatagtaataatc--atattcatTAGACCAAATAAAAAAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113215 165 - 128169293 TAAAAATAATTTCCAACAATATTTGAAGCAGTAATACAAGA--AATTAGC----AAAAAA---AATTAAATATCCACCTTGGGGATGAAAGTG-GATAAAAATTTCCAAATTTTTCATCCAAATTTTGAAATCCAATAAAATTAACAATC--GTATTGATTATACAAAATAAAAAAT i calJac3.chr8 C 0 I 306 s saiBol1.JH378145 730881 149 - 18371965 TAAAAATAATTTCCAACAATATTTGAAATGGTAATACAAGA--AATTAGC----AAAAAAATTAAACAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------CCCAAATTTGGAAATCCAATAATATTCACAATC--ATATTCATTAGACAAATTAAAAAAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390438 147 + 3566421 TAGAAATAATTTCTAATAATATTTGAAAC--TAATACAAGC--AATTAGC----AAAAAAATTAAACAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------CCCAAATTTGGAAATCCAATAAAATTAACAATC--ATATTGATTAGACAAAATAAAAAAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892241 149 - 9267652 TAAAAATAATTTCCAACAATACCTGAAACAGTAATACAAGA--AATTCAC----AAAAAAATTAAACAAATATCTACCTTTGGGATGAAAGTGTGAT--------------------CCCAAATTTGGTAATCCAATAAAATTAACAATC--ATATTGATTAGACAGAATAAAAAAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752534 135 + 14340318 -------------taaaaatatgtgaaatattagaatgaga--aatt-------aataagatttaatagattttcaccttacaaatgaaagtgtgat--------------------ttcacattagataattccataacaaaaataatcatatattaatcagatcaaataaaaaat i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51762839 125 - 55844845 -----GTAATCTACAACAGTATTTGAAACATCCATACAAAA--AA---GC----AATA---TTAAGCAAATTTTCACCTTT-GAATTCAAATGTAAT--------------------TCTG--------AATCAAATGATATAAATAACC--TTATTAATTAGAATAGATAAA---- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1198518 146 + 1446996 TAGAAATAGACTCCAACAAAATCTGAAGCGTTAACACAAACATAATT-------AACAAGATTAAACAAATTTCTGACATAAGAATGGGAGTTTAAT--------------------TTCATATCAGGTaatcaaatagtataa--aata--atattaaataaaatgaataaaaatt i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739583 558 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e macNem1.NW_012011522v1 2783624 139 + 3123512 I a score=103141.000000 s hg38.chrUn_KI270749v1 55764 11 + 158759 AAATAGGGGAT s panTro5.chr1 101901108 11 - 228573443 AAATAGGGGAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520833 11 - 162613886 AAATAGAGGAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35462 11 - 126596 AAATAGGGGAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771546 11 + 99891981 aaataggggat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472192 11 - 185818997 AAATAGGAGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301874 11 + 192294377 AAATAGGAGAT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504417 11 + 10077455 AAATAGGAGAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710096 11 + 127223203 AAATAGGAGAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170676 11 - 1799296 AAATAGGAGAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753928 11 + 6934359 AAATAGAAGAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113686 11 - 128169293 aaaTAGAGGAT i calJac3.chr8 I 306 C 0 s saiBol1.JH378145 731030 11 - 18371965 GAAGAGAGGAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390585 11 + 3566421 AAAGAGAGGAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892390 7 - 9267652 ----AGAGGAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752669 11 + 14340318 atgtatgggct i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51762964 11 - 55844845 AAATAGGAGAT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1198664 11 + 1446996 aaataTGGGAA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739583 558 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e macNem1.NW_012011522v1 2783624 139 + 3123512 I a score=326494.000000 s hg38.chrUn_KI270749v1 55775 27 + 158759 TCTCAGTACATGCT-AAA-ATATATTTGT s panTro5.chr1 101901119 27 - 228573443 TCTCAGTACATGCT-AAA-ATATATTTGT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520844 27 - 162613886 TTTCAGTAAATGCA-AAA-ATATATTTGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35473 27 - 126596 TCTCAGTACATGCT-AAA-ATATATTTGT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771557 27 + 99891981 tctcagtacatgct-aaa-atatatttgt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472203 27 - 185818997 TCTCAGTACATGCT-AAA-ATATATTTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301885 27 + 192294377 TCTCAGTACATGCT-AAA-ATATATTTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783763 27 + 3123512 TCTCAGTACATGCT-AAA-ATATATTTGT i macNem1.NW_012011522v1 I 139 I 240 s cerAty1.NW_012000909v1 2504428 27 + 10077455 TCTCAGTACATGCT-AAA-ATATATTTGT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710107 27 + 127223203 TCTCAGTACATGCT-AAA-ATATATTTGT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170687 27 - 1799296 TCTCAGTACATGCT-AAA-ATATATTTGT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753939 27 + 6934359 TCTCAGTACATGCT-AAA-ATATAGTTGT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113697 27 - 128169293 TCTAAGTACATGCT-AAA-GCATTTTTGT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731041 27 - 18371965 TCTCAGTACATGCA-AAA-ACATTTTTGT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390596 27 + 3566421 TCTCAGTACATGCT-AAA-ACATTTTTGT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892397 27 - 9267652 TCTCAGTACATGCT-AAA-ACGTATTTGT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752680 28 + 14340318 tcttaatatatgcc-aaatatgtatttgt i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51762975 28 - 55844845 TCTCAATATATGCTGAAA-GTATATTTAT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1198675 28 + 1446996 TGTCATTACACACTGAAA-ATATACTTAA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739583 558 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I a score=884998.000000 s hg38.chrUn_KI270749v1 55802 96 + 158759 TAA--AAGGCAATATTCATGTCTTTAAAGATTTTAAATGCTATAAAGAGTCTGATATTCTATAGGCAAACAT---------------------GTGTATGTCCATTAGAAGAAGAGAG--G---- s panTro5.chr1 101901146 96 - 228573443 TAA--AAGGCAATATTCATGTCTTTAAAGATTTTAAATGCTATAACGGGTCTGATATTCTATATGCAAACAT---------------------GTGTATGTCCATTAGAAGAAGAGAG--G---- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520871 96 - 162613886 TAA--AAGGTAATATTCATGTATTTAAAGATTTTAAATGCTATAAAGAGTCTGATATTCTATATGCAAACAT---------------------GTGTATGTCTATTAGAAGAAGAGAG--G---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35500 96 - 126596 TAA--AAGGCAATATTCATGTCTTTAAAGATTTTAAATGCTATAAAGGGTCTGATATTCTATATGCAAACAT---------------------GTGTATGTCCATTAGAAGAAGAGAG--G---- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771584 96 + 99891981 taa--aaggtaatattcatGTCTTTAAAGATTTTAAATGCTATAAAGAGTCTGATATTCTATATGCAAACAT---------------------GTGTATGTCTATTAGGAGAAGAGAG--G---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472230 94 - 185818997 TAA--AAGGTAATATTCATGTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAACAAAC-----------------------GTGTATGTCTATTAGAAGAAAAGAG--G---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301912 94 + 192294377 TAA--AAGGTAATATTCATGTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAACAAAC-----------------------GTGTATGTCTATTAGAAGAAAAGAG--G---- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504455 94 + 10077455 TAA--AAGGTAATATTCGTGTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAGCAAAC-----------------------GTGTATGTCTATTAGAAGAAAAGAG--G---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710134 94 + 127223203 TAA--AAGGTAATATTCGTGTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATGTTCTATAAGCAAAT-----------------------GTGTATGTCTATTAGAAGAAAAGAG--G---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170714 94 - 1799296 TAA--AAGGTAATATTCGTGTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAGCAAAC-----------------------GTGTATGTCTATTAGAAGAAAAGAG--G---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753966 94 + 6934359 TAA--AAGGTAATATTCATGTATTTAAATATTTTAAATGCTATGAAGAGTCAAATATTCTATAAGTAAAC-----------------------GTGTATGTCTATTAGAAGAAAAGAG--G---- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113724 96 - 128169293 TAA--AGGGTTATATTCATGTCTTTAATGATTTTAAATGCCATAACGAGTTTGATATTCCATATGCAAACAT---------------------ATATATGCCTATTAGAAGAAGAGAG--C---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731068 96 - 18371965 TAA--AGTGTTATATTCATGTCTTTAATGATTTTAAATGCTATAATGAGTCTGATATTCCATATGCAAACAT---------------------ATGTATGCCTATTAAAAGAAGAGAG--G---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390623 96 + 3566421 TAA--AGGGTTATATTAACGTCTTTAATGATTTTAAATGCTACAACGAGGCTGATACTCCATATGCAAACAT---------------------GTGTAAGCCTATTAGAAGAAGAGAG--G---- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892424 96 - 9267652 TAA--AGGTTTATATTCATGTCTTTAATGACTTTAAATGCTATAACGAGTCTGATATTCCATATGCAAATAT---------------------CTGTATGCCTATTAGAAGAAGAGAG--G---- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752708 96 + 14340318 taa--aaGGTTATATTCATGTATTCAAAGGCTCAAAAGGCCACAGAGAGTCTGATATTCCCCATACACAT-----------------------TCGTATGTCTAGGAGAGGAAAAGAGAAG---- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763003 112 - 55844845 -TG--CATGTTATATTCATGTCTTTAAGGGTAATAAAAGCTATAAAGAGTCTGATATTTTATACATATATACACATTTATGT----CTAAGAAATATATGTCTAAGAGAGGGAGAGAG--A---- i canFam3.chr18 C 0 I 137 s dasNov3.JH578441 1198703 123 + 1446996 TAAATAAGGTTTTATCCATGTCTTTAAAAATTCTAGAAGCTACAAGGAGGCTGATATTTTacacacacatacacacacacaccacacagacacatgcacTTCAATGAGAGAGAAAAAG--AAATA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739583 558 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e macNem1.NW_012011522v1 2783790 240 + 3123512 I a score=1274793.000000 s hg38.chrUn_KI270749v1 55898 160 + 158759 -TCTGATTTTCATATGTTACTACATAGAGA--------------TAGA-----GAAGTGGAT------AGATTA---ATTTGCATATGCATAGAGAAAGCATAAAATAGAAATTTACTATCATA-TTAAAGGAATTTTAATTCAACAATAAAATAATTC------------AAAGGTAAAATTTTAAATATTTTTAACAGGT s panTro5.chr1 101901242 160 - 228573443 -CCTGATTTTCATATGTTACTACATAGAGA--------------TAGA-----GAAGTGGAT------AGATTA---ATTTGCATATGCATAGAGAAAGCATAAAATAGAAATTTACTATCATA-TTAAAGGAATTTTAATTCAACAATAAAATAATTC------------AAGGGTAAAATTTTAAATATTTTTAACAGGT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108520967 161 - 162613886 -CTTGATTTTCATATGTTACTACATAGAGA--------------TAGA-----GAAGTGGAT------AGATTA---ATTTGCATATGTATAGAGAAACTATAAAATACAAATTTACTATCATACTTAAAGGAATTTAAATTCAACAATAAAATAATTC------------AACGGTAAAATTTTAAATATTTTTAACAGTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35596 158 - 126596 -CCTGATTTTCATA-GTTACTACATAGAGA--------------TAGA-----GAAGTGGAT------AGATTA---ATTTGCATATGCATAGAGAAAGCATAAAATAGAAATTGACTATCATA--TAAAGGAATTTTAATTCAACAATAAAATAATTC------------AAAGGTAAAATTTTAAATATTTTTAACAGGT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771680 161 + 99891981 -CCTGATTTCCATATGTTACTACATAGAGA--------------TAGA-----GAAGTAGGT------AGATTA---ATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATACTTAAAGGAATTTAAATTCGACAATAAAATAATTC------------AATGGTAAAATTTTACATATTTTTAACAGTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472324 160 - 185818997 -TCTCATTTTCATATGTTACTACATAGAGA--------------TAGA-----GAAGTGGAT------AGATTA---ATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTTT-ACAGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302006 160 + 192294377 -TCTCATTTTCATATGTTACTACATAGAGA--------------TAGA-----GAAGTGGAT------AGATTA---ATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTTT-ACAGTT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504549 160 + 10077455 -TCTCATTTTCATATGTTACTACATAGAGA--------------TAGA-----GAAGTGGAT------AGATTA---ATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTTT-ACAGTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710228 160 + 127223203 -TCTCATTTTCATATGTTACTACATAGAGA--------------TAGA-----GAAGTGGAT------AGATTA---ATTTGCATATGCATAGATAAAGCATAAAATATAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTTT-ACAGTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170808 160 - 1799296 -TCTCATTTTCGTATGTTACTACATAGAGA--------------TAGA-----GAAGTGGAT------AGATTA---ATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTTT-ACAGTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754060 158 + 6934359 -TCTCATTTTCATATGTTACTACATAGAGA--------------TAGA-----GAAGTGGAT------AGATTA---ATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATACTTAAAAGAATTTAAATTCAACA--AAAAAAATTC------------AATGGTAAAATTTTTAATATTTTT-ACAGTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113820 172 - 128169293 -TCTCATATTCATATGTTACTACATAGAGAT----------TGTTCAA-----GAAGTGAAT------AGATTA---ATTTTCATATGCACAGAGTCAGTATAAAATTCAAATTTATTATA---CTTAAAGGAATTTAAATTCAAGAATTAAATAATTCAACGAT-TAAATAATGGtaaaattttaaatatttta-ataGTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731164 172 - 18371965 -CCTCATTTTCATATGTTACTACATACAGAT----------TGTTAGA-----GAAGTGACT------AGATTA---ATTTGCATATGCATAGAGAAAGtataaaatacaaatttattata---cttaaaggaatttaaattcaagaataaaataattcaacaat-taaataatggtaaaattttaaatatttta-ataGTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390719 171 + 3566421 -TCTCATTTTCATATGTTACTACATAGAGAT----------TATTAGA-----GAATTGAAT------AGATTA---ATTTGTATATGCATAGAGAAAGTATAAAATACAAATTTATTATA---CTTAAAGGAATTTAAATTCAAGAA-AAAATAACTCAATGAT-TAAATAATGGTAAAATTTTAACTATTTTA-ATAGTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892520 174 - 9267652 -TCTCATTTTCATATGTTACTACATAGAGAT----------TGTTAGA-----GAAGTGAAT------AGATTA---ATTTGTATATGCATAGAGAAAGTGTAAGATACAAATTTATTATCAT-ATTAAAGGAATTTAAATTCAAGAATAAAATAATTCAATGAT-TAAATAATAGTAAAATTTTAAATATTTTA-ATAGTT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752804 175 + 14340318 -TCTTAGTCTTACTTTCTACTACGTAAATC--------------TAGACAGAGGAAACAGAA------GGATTA---ATTTTTACATGCATAAA-AAAACATCAACTG-AAACTTTTTACCAC-CTTAAAGAAAGTTAAATTCAGGAATAAAAAGTTTCAATGGCAAAAATAATGGTAAAATTGTACATATTTTGTATAGTT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763252 118 - 55844845 -TCTTATTTTCATATTTTACTAACCAGAGA--------------TAGA-----GAAATGCATATATAGATATTA---GCTTGCATATGCACAGAGAAAACATCACATA---GTTTATTATCATATATAAAGGaaatt------------aaaataa---------------------------------------------- i canFam3.chr18 I 137 C 0 s dasNov3.JH578441 1198826 132 + 1446996 TCTTTCTTTTCCTGTTTTACTAACTAGAGACAAGTGGTGAAAGATATA-----AAAGTAGAT------AGCTAGAACATTTGTATATAGAGAGAGAAAACTTCAACTAAAA---CATTATCATACATA---GAAATTAAATTCAGTAAT----------------------------------------------------- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739583 558 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e macNem1.NW_012011522v1 2783790 240 + 3123512 I a score=163915.000000 s hg38.chrUn_KI270749v1 56058 25 + 158759 ACATTATTAATATTA---GATAATATTT s panTro5.chr1 101901402 25 - 228573443 GCATTATTAATATTA---GATAACATTT i panTro5.chr1 C 0 I 3 s panPan2.chr7 108521128 25 - 162613886 ACATTATTAATATTA---GATAATATTT i panPan2.chr7 C 0 I 3 s gorGor5.CYUI01000522v1 35754 25 - 126596 ACATTATTAATATTA---GATAATATTT i gorGor5.CYUI01000522v1 C 0 I 2 s nomLeu3.chr17 55771841 22 + 99891981 ACATTAT---TATTA---GATAATATTT i nomLeu3.chr17 C 0 I 3 s rheMac8.chr3 133472484 25 - 185818997 ACATTATTAATATTA---GATAATTATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302166 25 + 192294377 ACATTATTAATATTA---GATAATTATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784030 24 + 3123512 ACATTATTAA-ATTA---GATAATATTT i macNem1.NW_012011522v1 I 240 C 0 s cerAty1.NW_012000909v1 2504709 22 + 10077455 ACATTATTAATATTA---GATA---TTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710388 25 + 127223203 ATATTATTAATATTA---AATATTTATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170968 28 - 1799296 ACATTATTAATATTAGATAATATTTATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754218 25 + 6934359 ACATTATTAATGTTA---GATATTTATA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113992 25 - 128169293 GCATCATTAATATTA---GATCGTAACA i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 731336 25 - 18371965 GCATTATTAATATTA---GATTGTAACA i saiBol1.JH378145 C 0 I 3 s cebCap1.NW_016107540v1 1390890 25 + 3566421 GCATTATTAATATTG---GATCATAACA i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 1892694 25 - 9267652 GCATTATTAATATTA---GATCATAACT i aotNan1.NW_018514471v1 C 0 I 3 s otoGar3.GL873564 12752979 25 + 14340318 ACACTGTCGATATTG---CATTATGATA i otoGar3.GL873564 C 0 I 6 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66739583 558 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e canFam3.chr18 51763370 0 - 55844845 C e dasNov3.JH578441 1198958 0 + 1446996 C a score=41769.000000 s hg38.chrUn_KI270749v1 56083 3 + 158759 ATA s panTro5.chr1 101901430 3 - 228573443 ATA i panTro5.chr1 I 3 C 0 s panPan2.chr7 108521156 3 - 162613886 ATA i panPan2.chr7 I 3 C 0 s gorGor5.CYUI01000522v1 35781 3 - 126596 ATA i gorGor5.CYUI01000522v1 I 2 C 0 s ponAbe2.chrUn 66740141 3 - 72422247 ata i ponAbe2.chrUn I 558 I 209 s nomLeu3.chr17 55771866 3 + 99891981 ATA i nomLeu3.chr17 I 3 C 0 s rheMac8.chr3 133472509 3 - 185818997 ATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302191 3 + 192294377 ATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784054 3 + 3123512 ATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504731 3 + 10077455 ATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710413 3 + 127223203 ATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170996 3 - 1799296 ATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754243 3 + 6934359 ATA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108114020 3 - 128169293 ATA i calJac3.chr8 I 3 I 3 s saiBol1.JH378145 731364 3 - 18371965 ATA i saiBol1.JH378145 I 3 I 3 s cebCap1.NW_016107540v1 1390916 3 + 3566421 ATA i cebCap1.NW_016107540v1 I 1 I 3 s aotNan1.NW_018514471v1 1892722 3 - 9267652 ATA i aotNan1.NW_018514471v1 I 3 I 3 s otoGar3.GL873564 12753010 3 + 14340318 ATA i otoGar3.GL873564 I 6 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e canFam3.chr18 51763370 0 - 55844845 C e dasNov3.JH578441 1198958 0 + 1446996 C a score=90092.000000 s hg38.chrUn_KI270749v1 56086 9 + 158759 ATTGTGAAA s panTro5.chr1 101901433 9 - 228573443 ATTGTGAAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521159 9 - 162613886 ATTGTGAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35784 9 - 126596 ATTGTGAAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771869 9 + 99891981 ATTGTGAAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472512 9 - 185818997 ATTGTGAAA i rheMac8.chr3 C 0 I 38 s macFas5.chr3 67302194 9 + 192294377 ATTGTGAAA i macFas5.chr3 C 0 I 38 s macNem1.NW_012011522v1 2784057 9 + 3123512 ATTGTGAAA i macNem1.NW_012011522v1 C 0 I 63 s cerAty1.NW_012000909v1 2504734 9 + 10077455 ATTGTGAAA i cerAty1.NW_012000909v1 C 0 I 38 s chlSab2.chr21 5710416 9 + 127223203 ATTGTGAAA i chlSab2.chr21 C 0 I 38 s manLeu1.NW_012105809v1 1170999 9 - 1799296 ATTGTGAAA i manLeu1.NW_012105809v1 C 0 I 38 s colAng1.NW_012115910v1 1754246 9 + 6934359 ATTGTGAAA i colAng1.NW_012115910v1 C 0 I 38 s calJac3.chr8 108114026 9 - 128169293 ATTATGAAA i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 731370 9 - 18371965 ATTATGAAA i saiBol1.JH378145 I 3 C 0 s cebCap1.NW_016107540v1 1390922 9 + 3566421 ATTATGAAA i cebCap1.NW_016107540v1 I 3 C 0 s aotNan1.NW_018514471v1 1892728 9 - 9267652 ACTATGAAA i aotNan1.NW_018514471v1 I 3 C 0 s otoGar3.GL873564 12753013 9 + 14340318 ACTGTGACA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763370 6 - 55844845 ---ataaaa i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1198958 1 + 1446996 ------A-- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740144 209 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I a score=177611.000000 s hg38.chrUn_KI270749v1 56095 28 + 158759 ATATTCCATGCTAAA-AT-AAGATGCAATG s panTro5.chr1 101901442 28 - 228573443 ATATTCAATGCTAAA-AT-AAGATACAATG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521168 28 - 162613886 ATATTCAATGCTAAA-AT-AAGATAGAATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35793 28 - 126596 ATATTCAATGCTAAA-AT-AAGATACAATG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771878 28 + 99891981 ATATTCAATGCTAAA-AT-AAGATAGAATT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472559 28 - 185818997 ATAATAATTGTGAAA-AT-AAAATAGAACA i rheMac8.chr3 I 38 C 0 s macFas5.chr3 67302241 28 + 192294377 ATAATAATTGTGAAA-AT-AAAATAGAACA i macFas5.chr3 I 38 C 0 s cerAty1.NW_012000909v1 2504781 28 + 10077455 ATAATAATTGTGAAA-AT-AAAATAGAACA i cerAty1.NW_012000909v1 I 38 C 0 s chlSab2.chr21 5710463 28 + 127223203 ATAATAATTGTGAAA-AT-AAAATAGAACA i chlSab2.chr21 I 38 C 0 s manLeu1.NW_012105809v1 1171046 28 - 1799296 ATAATAATTGTGAAA-AT-AAAATAGAACA i manLeu1.NW_012105809v1 I 38 C 0 s colAng1.NW_012115910v1 1754293 28 + 6934359 ATAATAATTGTGAAA-AT-AAAAAAGAACA i colAng1.NW_012115910v1 I 38 C 0 s calJac3.chr8 108114035 27 - 128169293 -AAGTCAATGCTAAA-AT-AAAATAGAAGG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731379 27 - 18371965 -AC-TCAATGCTAAG-ATAAAAATAGAAGG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390931 27 + 3566421 -AAGTCAATGCTAAA-AT-AAAATAGAAGG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892737 27 - 9267652 -AAGTCAATGCTAAA-AT-AAAACAGAAGG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753022 28 + 14340318 ATATTCAATGCTAAA-AT-AAAGTAGAAAG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763376 29 - 55844845 atattCAATGGTAAATAA-AAAATACAGTC i canFam3.chr18 C 0 I 1 s dasNov3.JH578441 1198959 24 + 1446996 ATGTTCAATGGtaaa-at-aaaatta---- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740144 209 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e macNem1.NW_012011522v1 2784066 63 + 3123512 I a score=87322.000000 s hg38.chrUn_KI270749v1 56123 8 + 158759 TCTAAACA s panTro5.chr1 101901470 8 - 228573443 TCTAAACA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521196 8 - 162613886 TCTAGACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35821 8 - 126596 TCTAAACA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771906 8 + 99891981 TCTAAACA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472587 8 - 185818997 TCTAAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302269 8 + 192294377 TCTAAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784129 8 + 3123512 TCTAAACA i macNem1.NW_012011522v1 I 63 C 0 s cerAty1.NW_012000909v1 2504809 8 + 10077455 TCTAAACA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710491 8 + 127223203 TCTAAACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171074 8 - 1799296 TCTAAACA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754321 8 + 6934359 TCTAAACA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108114062 8 - 128169293 TCTAAACA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731406 7 - 18371965 TCTAAA-A i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390958 8 + 3566421 CCTAAACA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892764 8 - 9267652 TCTAAACA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753050 8 + 14340318 TACAAGAA i otoGar3.GL873564 C 0 I 622 s canFam3.chr18 51763406 8 - 55844845 TACAATCA i canFam3.chr18 I 1 C 0 s dasNov3.JH578441 1198983 8 + 1446996 tttaaaaa i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740144 209 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I a score=1490674.000000 s hg38.chrUn_KI270749v1 56131 167 + 158759 TCAGTATTAAAACTAGTATAAATATTTGCTTGTTTAT--------------ACA--------AGGAAAATTCAAGCTCAACCTAAAATTATATAGGAAATA-AAATAAAAATTTTAAGGGAGCT------CTTTAATA-ACataaac----atat-atat--at------acacacacacacacatataacatgt-------atatatgtt---atatgg s panTro5.chr1 101901478 163 - 228573443 TCAGTATTAAAACTAGTATAAATATTTGCTTGTTTAT--------------ACA--------AGGAAAATTCAAGCTCGACCTAAAATTATATGGGAAATA-AAAGAAAAATTTTAAGGGAGCT------CTTTAATA-ACataaac----atat-atat--at----------acacacacacatataacatgt-------atatatgtt---atatgg i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521204 173 - 162613886 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACA--------AGGAAAATTCAAGCTCAACCAAAAATTATATAGGAAATA-AAAGAAAAATTTTAAGAGAGCT------CTTTAATA-acacaaac----atat-atat--atatacacacacacacacgcacatataacatgt-------atatatgtt---atatgg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35829 163 - 126596 TCAGTATTAAAACTAGTATAAATATTTGCTTGTTTAT--------------ACA--------AGGAAAATTCAAGCTCGACCTAAAATTATATGGGAAATA-AAAGAAAAATTTTAAGGGAGCT------CTTTAATA-ACataaac----atat-atat--at----------acacacacacatataacatgt-------atatatgtt---atatgg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55771914 172 + 99891981 TCAATATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACA--------AGGAAAATTCAAGATCAACCTAAAATTATATAGGAAATA-AAAGAAAAATTTTAGGGGAGCT------CTTTATTA-ACACAAAC----atat-atat--aa-tatatatatatatacacacatataacatat-------atatatgtt---atatgg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472595 167 - 185818997 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACA--------AGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGCT------CTTTAata-atacaaac----atat-atat------acacacacatacacacatatataac--gt-------atatatgtt---acatgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302277 169 + 192294377 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACA--------AGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGCT------CTTTAata-atacaaac----atat-atat------acacacacatacacacatatataacatgt-------atatatgtt---acatgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784137 169 + 3123512 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACA--------AGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGCT------CTTTAata-atacaaac----atat-atat------acacacacatacacacatatataacatgt-------atatatgtt---acatgg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504817 173 + 10077455 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACA--------AGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGCT------CTGTAATA-ACACAAAC----atat-atatgaac--acacacacatatacacatatataacatgt-------atatatgtt---acatgg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710499 171 + 127223203 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACA--------AGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGCT------CTTTAATA-ACACAAAC----atat-atat--ac--acacacacatatacacatatataacatgt-------atatatgtt---acatgg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171082 170 - 1799296 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTA---------------ACA--------AGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGTT------CTGTAATA-acacaaac----atat-atat--ac--acacacacatatacacatatataacatgt-------atatatgtt---acatgg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754329 167 + 6934359 TCAGTATTAAAACTAGTGTAAATATTTGCATGTTTAT--------------ACA--------AGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAAT-----GAAAAATGTTAAGGGAGCT------CTTTAATA-ACACAAAC----atat-atat--ac--acacacacatatacacacatataacatgt-------atatatgtt---acatgg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108114070 164 - 128169293 TCAGTATTAAAACTGGTATAAACATTTGCATTTTTAT--------------ACA--------ACGAAAATTCAAGCTCAACCTAAAAACACATAAGAAA-------AAGAATTTTAAGGGAGCT------CTTTAATACacacacacacatatat-atat--ac--------acacatacacacatgtaacatgc-------atatatTTT---ATATGG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731413 158 - 18371965 TCAGTATTAAAACTGGTATAAACATTTGCATTTTCAT--------------ACA--------ATGAAAATTCAAGCTCAACCTAAAAACACATAAGAAA-------AAGTATTATAAGGAAGCT------CTTTAatacacacacac----atat-gtat--at--------acacatacacacatata--atgt-------atatatatt---atatgg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390966 159 + 3566421 TCAGTATT-AAACTGGTATAAACATTTGCATTTTTAT--------------ACA--------TCGAAAATTCAAGCTCAACCTAAAAACACATAAGAAA-------AAGAATTTTAAGGGAGCT------CTTTAATACACACACAC----atat-gtat--at--------atacacacacacatataacatgt-------atatatatt---atatgg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892772 148 - 9267652 TCAGTATA-AAACTGGTATAAACATTTGCATTTTTAT--------------ACA--------ACAAAAATTCAAGCTCAACCTAGAAACACATAAGAAA-------AAGAATTTTAAGGGAGCT------CTTTAATacacacacac---------------ac--------acacacacacacacacaACATGT-------Gtata---t---atatgg i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753680 170 + 14340318 TCAGAATCAAAATTAGAATCAATATTCAAGTTTGTAT--------------AAT--------AGGAAAATTCAGGCTTAACCAAAAAATCTATAGAAAATG-GAAGAAAAATT-TAAGGTAGCT------GTTTAATA-ACATATAG----ACAC-ACAT--AT---------AACATATAGATGAATAAGATGTGCTACCCACATGCATT---ATTTGA i otoGar3.GL873564 I 622 C 0 s canFam3.chr18 51763414 139 - 55844845 TTGGTATTAAAGCTGGTATAAATATTTGGGTTTATATCATTATAATTCTAAAAT--------AGGAAAATTCAAACTTAACCTAAATATTTATAGGAAATGCGAACAAAAAT--TGAGGTAGTTATTTCCCCTTAAAG-ATAGAAAG----AGA------------------------------------------------------------------ i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1198991 177 + 1446996 ttagtagtaaaattaatatgaatatttGAGTTTTTAT--------------GCTTATGTAGCATAAAAATTCAAGTTTAATCTGAAAAAGTATAGGAAGTA-AAAGAAATAAGTCAATGGGGtt------atttaata-atatatat----atttaatat--at--------aaaaGCCAATAATTTTAACATAC-------AGAAATTTTAACATTTAG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740144 209 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I a score=57735.000000 s hg38.chrUn_KI270749v1 56298 4 + 158759 gata s panTro5.chr1 101901641 4 - 228573443 gata i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521377 4 - 162613886 gata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35992 4 - 126596 gata i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66740353 4 - 72422247 gata i ponAbe2.chrUn I 209 I 115 s nomLeu3.chr17 55772086 4 + 99891981 gata i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472762 4 - 185818997 gata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302446 4 + 192294377 gata i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784306 4 + 3123512 gata i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504990 4 + 10077455 gata i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710670 4 + 127223203 gata i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171252 4 - 1799296 gata i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754496 4 + 6934359 gata i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 731571 4 - 18371965 gata i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391125 4 + 3566421 gata i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892920 4 - 9267652 gata i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753850 4 + 14340318 GATG i otoGar3.GL873564 C 0 I 4 s canFam3.chr18 51763553 4 - 55844845 GAAA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1199168 4 + 1446996 GATA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e calJac3.chr8 108114234 0 - 128169293 C a score=255442.000000 s hg38.chrUn_KI270749v1 56302 41 + 158759 gatatagatttaacatg-ttatatctatatttg----------tatctat----aa s panTro5.chr1 101901645 41 - 228573443 gatatagatatatcatg-ttatatctatatttg----------tatctat----aa i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521381 45 - 162613886 gatatagatttaacatg-ttatatctatatttgt------atctatctat----aa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 35996 41 - 126596 gatatagatttaacatg-ttatatctatatttg----------tatctat----aa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772090 45 + 99891981 gatatagatttaacatg-ttatatctatatttat------atctatctat----aa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472766 39 - 185818997 gacacagatttaacatg-ttatatctatatttg----------tatctat------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302450 39 + 192294377 gacacagatttaacatg-ttatatctatatttg----------tatctat------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784310 39 + 3123512 gacacagatttaacatg-ttatatctatatttg----------tatctat------ i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504994 35 + 10077455 gatacagatttaacatg-ttatatctatatttg--------------tat------ i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710674 35 + 127223203 gatacagatttaacatg-ttatatctatatttg--------------tat------ i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171256 39 - 1799296 gatacagatttaacatg-ttatatctatatttg----------tatctat------ i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754500 45 + 6934359 gatacagatttaacatg-ttatatctatatttg----------tatctatctataa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108114234 45 - 128169293 GATATAGTTTTAACATG-TTATATCGATATTTGT------ATATCTCTAT----AA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731575 45 - 18371965 gatatagttttaacatg-ttatatcgatatttgt------atctatctat----aa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391129 23 + 3566421 gatttagttttaacatg-t----------------------------tat----aa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892924 45 - 9267652 gatatagttttaacatg-ttatatcgatatttgt------atctatctat----aa i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753858 52 + 14340318 CATATACCTTTAGTATGCTTATATTTGTACCTATTAAAAACTATATTCAT----GT i otoGar3.GL873564 I 4 C 0 s canFam3.chr18 51763557 39 - 55844845 GAGAATATTTTAACTTA-TTATAGCTTCATCTT----------TATCTGT------ i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1199172 37 + 1446996 --TACA-ATAAACCATA-TT-TACCTAGATGTA----------CACTAAT----AA i dasNov3.JH578441 C 0 I 549 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740357 115 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I a score=442284.000000 s hg38.chrUn_KI270749v1 56343 42 + 158759 ctacagctgtatgtatctacatttctatatatttaCTCAGTG s panTro5.chr1 101901686 42 - 228573443 ctacagctgtatgtatctatatttctatatatttactcagtg i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521426 42 - 162613886 ctatagctatatgtatctacattcctatatatttacttagtg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36037 42 - 126596 ctacagctgtatgtatctacatttctatatatttactcagtg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772135 42 + 99891981 ctatagctatatgtatctacatttctatatatttactcagtg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472805 42 - 185818997 ctatatctatatgtatctacatttctatatgtttactcagtt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302489 42 + 192294377 ctatatctatatgtatctacatttctatatgtttactcagtt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784349 42 + 3123512 ctatatctatatgtatctacatttctgtatgtttactcagtt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505029 42 + 10077455 ctatatctatatgtatcaacatttctatatgtttactcagtt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710709 42 + 127223203 ctatatctatatgtatctacatttctatatgtttactcagtt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171295 42 - 1799296 ctatatctatatgtatctacatttctatatgtttactcagtt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754545 42 + 6934359 ctatatctatatgtatctacatttctatatgtttactcagtt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108114279 42 - 128169293 CTATATCCATATGTATCTACATTTCTATATATTTACTCAGTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731620 42 - 18371965 ctatattcatatgtatctacatttctatatatttactcagtt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391152 42 + 3566421 ctatatacatatgtatctacatttctatatatTCATTCAGTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892969 42 - 9267652 ctatatccatatgtatctacatctctatatATTTACTCAGTT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753910 41 + 14340318 CTATATCTGTATGTGTGTATATATATATA-ATTTACTCAGTT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763596 26 - 55844845 ------------TTATCAATATTTCTA----TCTACTCAGGC i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740357 115 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e dasNov3.JH578441 1199209 549 + 1446996 I a score=374787.000000 s hg38.chrUn_KI270749v1 56385 34 + 158759 ACATAAATATAGACTGGAATAAATATAAAGACAC s panTro5.chr1 101901728 34 - 228573443 atataaatataGACGGGAATAAATATAAGGACAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521468 30 - 162613886 at----atatagactagaataaatataaaggcac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36079 34 - 126596 atataaatataGACTGGAATAAATATAAGGACAC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772177 28 + 99891981 atataaatataGACTAGAATAAA------GGCAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472847 34 - 185818997 atgtaaatatagactggaataaatataaagacac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302531 34 + 192294377 atgtaaatatagactggaataaatataaagacac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784391 34 + 3123512 atgtaaatatagactggaataaatataaagacac i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505071 34 + 10077455 atgtaaatatagactggaataaatataaagacac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710751 34 + 127223203 atgtaaatatagactggaataaatataaagacac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171337 34 - 1799296 atgtaaatatagactggaataaatataaagacac i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754587 34 + 6934359 atgtaaatataGACTGGACTAAATATAAAGACAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108114321 34 - 128169293 ATAtaaagatagattggaataaatgtaaaggcac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731662 34 - 18371965 atataaagataaatTGGAGTAAATACAAAGGCAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391194 34 + 3566421 CTATAAAGATAGATTGGAATAAATATAAAGGCAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893011 34 - 9267652 ATAtaaagatagattggaataaatataaaggcac i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753951 33 + 14340318 AAATAAATGTAGACCTGA-TAAATATAAAGACAC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763622 34 - 55844845 ATATCAGAATAGACCTAAATCAATAGAAAGGCAC i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1199758 34 + 1446996 ATGTAAATGTAGACCTGAGTAAATAAAAATGCAC i dasNov3.JH578441 I 549 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740357 115 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I a score=30685.000000 s hg38.chrUn_KI270749v1 56419 2 + 158759 AT s panTro5.chr1 101901762 2 - 228573443 AT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521498 2 - 162613886 at i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36113 2 - 126596 AT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66740472 2 - 72422247 at i ponAbe2.chrUn I 115 I 769 s nomLeu3.chr17 55772205 2 + 99891981 AT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472881 2 - 185818997 at i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302565 2 + 192294377 at i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784425 2 + 3123512 at i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505105 2 + 10077455 at i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710785 2 + 127223203 at i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171371 2 - 1799296 at i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754621 2 + 6934359 AT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108114355 2 - 128169293 at i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731696 2 - 18371965 AT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391228 2 + 3566421 AT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893045 2 - 9267652 at i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753984 2 + 14340318 AT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763656 2 - 55844845 AG i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1199792 2 + 1446996 AT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I a score=15910.000000 s hg38.chrUn_KI270749v1 56421 2 + 158759 AT s panTro5.chr1 101901764 2 - 228573443 AT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521500 2 - 162613886 aa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36115 2 - 126596 AT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772207 2 + 99891981 AT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472883 2 - 185818997 at i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302567 2 + 192294377 at i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784427 2 + 3123512 at i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505107 2 + 10077455 at i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710787 2 + 127223203 at i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171373 2 - 1799296 at i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754623 2 + 6934359 AT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108114357 2 - 128169293 at i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731698 1 - 18371965 G- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391230 2 + 3566421 AT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893047 2 - 9267652 at i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753986 2 + 14340318 AT i otoGar3.GL873564 C 0 I 477 s canFam3.chr18 51763658 2 - 55844845 AT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1199794 2 + 1446996 AT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740474 769 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I a score=115677.000000 s hg38.chrUn_KI270749v1 56423 9 + 158759 GATTCTTGG s panTro5.chr1 101901766 9 - 228573443 GATTCTTGG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521502 9 - 162613886 gattcttgg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36117 9 - 126596 GATTCTTGG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772209 9 + 99891981 GATTCTTGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472885 9 - 185818997 GATTCTTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302569 9 + 192294377 GATTCTTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784429 9 + 3123512 GATTCTTGG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505109 9 + 10077455 GATTCTTGG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710789 9 + 127223203 GATTCTTGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171375 9 - 1799296 GATTCTTGG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754625 9 + 6934359 GATTCTTGG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108114359 9 - 128169293 tattcttgg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731699 8 - 18371965 -ATTCTTGG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391232 9 + 3566421 GATTCTTGG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893049 9 - 9267652 gattcttgg i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12754465 9 + 14340318 GGTCCTTGG i otoGar3.GL873564 I 477 C 0 s canFam3.chr18 51763660 9 - 55844845 Gattaaaaa i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1199796 9 + 1446996 GGTCCTTGG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740474 769 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I a score=4530.000000 s hg38.chrUn_KI270749v1 56432 1 + 158759 A s panTro5.chr1 101901775 1 - 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521511 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36126 1 - 126596 A i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772218 1 + 99891981 A i nomLeu3.chr17 C 0 C 0 s cerAty1.NW_012000909v1 2505118 1 + 10077455 A i cerAty1.NW_012000909v1 C 0 I 4 s calJac3.chr8 108114368 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731707 1 - 18371965 A i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391241 1 + 3566421 A i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893058 1 - 9267652 a i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12754474 1 + 14340318 A i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763669 1 - 55844845 a i canFam3.chr18 C 0 I 6 s dasNov3.JH578441 1199805 1 + 1446996 A i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740474 769 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e macFas5.chr3 67302578 0 + 192294377 C a score=258652.000000 s hg38.chrUn_KI270749v1 56433 61 + 158759 TAAAAAGGATTTAGTATCATAAAGACAAATTCTTTCCAAATTCACT-TATGAATTCACAACA s panTro5.chr1 101901776 61 - 228573443 TGAAAAGGATTTAGTATCATAAAGACAAATTCTTTCCAAATTCACT-TATGAATTCACAACA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521512 61 - 162613886 tagaaaggatttagtatcataaagacaaattctttccaaattcatc-tatcaattcacaaca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36127 61 - 126596 TAAAAAGGATTTAGTATCATAAAGACAAATTCTTTCCAAATTCACT-TATGAATTCACAACA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772219 61 + 99891981 TAAAAAGGATTTATTATCATAAAGCCAAATTCTTTCCAAATTCATC-TATCAATTCACAACA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108114369 61 - 128169293 taaaaaggatttggtatcataaggacaaattctttccaaattcacc-tatcaattcacaaca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731708 61 - 18371965 TAAAAAGGATTTGGTATCATAAAGACAATTTTTTTCCAAATTCATC-TATCAATTCACAACA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391242 61 + 3566421 TAAAAAGGATTTGGTATCATAAAGACAAATTCTTTCTAAATTCATC-GATCGATTCACAACA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893059 61 - 9267652 tgaaaaggatttggtatcataaagacaaattctttccaaattcatc-tatcgattcacaaca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12754475 60 + 14340318 TAAAAATGATTTGGAATTATAGAGAC-ACTTCCTCCCAAATTTATC-TATCAATTTATTACA i otoGar3.GL873564 C 0 I 165 s canFam3.chr18 51763676 62 - 55844845 aaaaaaaGATCTAGTATCATAAGGACAAATTCTTCCCAAATTCATCTTATCAATTTATTGCA i canFam3.chr18 I 6 I 6 s dasNov3.JH578441 1199806 61 + 1446996 TAAAACCAATTCAATATCATAAATGTAAGTTCATCTAAAAATCATC-CTTTCATTTAATGCG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740474 769 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=1641.000000 s hg38.chrUn_KI270749v1 56494 2 + 158759 GT s panTro5.chr1 101901837 2 - 228573443 AT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521573 2 - 162613886 at i panPan2.chr7 C 0 I 5 s gorGor5.CYUI01000522v1 36188 2 - 126596 AT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772280 2 + 99891981 AT i nomLeu3.chr17 C 0 I 5 s calJac3.chr8 108114430 2 - 128169293 at i calJac3.chr8 C 0 I 5 s saiBol1.JH378145 731769 2 - 18371965 AT i saiBol1.JH378145 C 0 I 5 s cebCap1.NW_016107540v1 1391303 2 + 3566421 AT i cebCap1.NW_016107540v1 C 0 I 5 s aotNan1.NW_018514471v1 1893120 2 - 9267652 at i aotNan1.NW_018514471v1 C 0 I 5 s canFam3.chr18 51763744 1 - 55844845 A- i canFam3.chr18 I 6 C 0 s dasNov3.JH578441 1199867 2 + 1446996 CT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740474 769 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e otoGar3.GL873564 12754535 165 + 14340318 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=1049173.000000 s hg38.chrUn_KI270749v1 56496 329 + 158759 -----ATACAGTTTCATTAGTATAATTTAAAAT-TTTTAAATAAATTCCAAGATTCATTTAAAGGAATATACA-------------------------------------TGTATACAAGCAGTCAAGA----AAGAAGC--------------------------------------------------------------------------------------------AAGAGTGCACTAA------ACTAACTTGCTATTAAAATACA------TTTTTAAAC-TTAGTAACTGAAACTGAGCAGTACTGATTT-CCAATACTGGAATTTAGGTATATGGGATCT--CAAAAGCACAGA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGATGTG---CTTTAGAA-GGCATTACCAAACCACGGGC--AAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAG s panTro5.chr1 101901839 330 - 228573443 -----ATACAATTTCATAAGTATAATTTAAAAT-TTTTAAATAAATTCCAAGATTCATTTAAAGGAATATACA-------------------------------------TGTATACAAGCAGTCAAGA----AAGAAGC--------------------------------------------------------------------------------------------AAGAGTGCACTAA------ACTAACTGGCTATTAAAATACA------TTTTTAAAC-TTAGTCACTAAAACTGAGCAGTACTGATTT-GGACTACTGGAATTTAGGTATATGGGATCT--CAAAAGCACAGA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGATGTG---CTTTGGAAGGGCATTACCAAACCACGAGC--AAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521580 329 - 162613886 -----atacagttccattagTGTAATTTAAAAA-TTTTAAATAAATTCCAAGATTCATTTAAAGGAATATACA-------------------------------------TGTATACCAGCAGTAAAGA----AAGAAGC--------------------------------------------------------------------------------------------AAGAGTGCACTAA------ACTAACTTGCTATTAAAATAAA------TTTTTAAAC-TTAGTAACTAAAACTGAGCAGTACTGATTT-GGAGTACTGGAATTTAGGTATATGGGATCT--CAATAGAATAAA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGATGTG---TTTTAGAA-GGCATTACCAAACCACGGGC--AAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAG i panPan2.chr7 I 5 C 0 s gorGor5.CYUI01000522v1 36190 328 - 126596 -----ATACAGTTTCATTAGTATAATTTAAAAT-TTTTAAATAAATTCCAAGATTCATTTAAAGGAATATACA-------------------------------------TGTATACAAGCAGTCAAGA----AAGAAGC--------------------------------------------------------------------------------------------AAGAGTGCACTAA------ACTAACTTGCTATTAAAATACA------TTTTTAAAC-TTAGTCACTAAAACTGAGCAGTACTGATTT-GGAGTACTGGAATTTAGGTATATGGGATCT--CAAAAGCACAGA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGATGTG---CTTTGGAA-GGCATTACCAAACCACGGGC--AAAGTT-CTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772287 293 + 99891981 -----ATACAGTTTCATTGG-------------------------------------TTTAAAGGAATATACA-------------------------------------TGTATACCAGCAGTAAAGA----AAGAAGC--------------------------------------------------------------------------------------------AAGAGTTCACTAA------ACTAACTTGCTATTCAAATAAA------TTTTTAAAC-TTAATAACTAACACTGAGCAGTACTGATTT-GGATTACTGGAATTTAGGTATATGGGATCT--CAATAGAATAAA-GCTCAAAG---------GAGACCCCTGCATGCACGAGAGCTTAGGATGTG---CTTTAGAA-GGCATTACCAAACCACAGGA--AAAGTTACTTTAGTGTCTTAGTTTTACTAGGTTTGAAAAGCCAGAGAAAAG i nomLeu3.chr17 I 5 C 0 s calJac3.chr8 108114437 329 - 128169293 -----atacaatttcattagtataatttaaaa--tttttaa-aaCTCCCAAGATTCATTTAAAGGAATAAACA-------------------------------------TGTATTCCAGCAGTAAATA----AAGAAGC--------------------------------------------------------------------------------------------AAGAGTACACCAA------ACTAACTTGCTGTTAAAATAAA------TTTGTAAAC-TTAGTAACTAAAGCTTTCCAGTCCTGATTT-GGAGTACTGGAATTTAGGTATATGGGATCC--CAATAGAATAAAGGCTTAAAA---------TAGACCCTTCTATGCATGAGAGCTTAGGATGTG---CTTTAGAA-GTCATTGCCAAACCACTGTC-AAAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAG i calJac3.chr8 I 5 C 0 s saiBol1.JH378145 731776 336 - 18371965 -----ATACAATTTCATTAGTATAATTTAACA--TTTTAAATAACTCCCAAGATTCATTTAAATCAATAAACA-------------------------------------CGTATACCAGCAGTAAAGA----AAGAAGC--------------------------------------------------------------------------------------------AAGAGTACACTAAACTAGTACTAACTTGCTATTAAAACAAA------TTTGTAAAC-TTAGTAACTAAAGCTTTCCAGTCCTGATTT-GGAGTACTAGAATTTAGTTATATGGGATCC--CAATAGAATAAAGGCACAAAG---------TAGACCCTTCTTTGCACGAGAGCTTAGGATGTG---CTTTAGGA-GTCACTGCCAAACCACTGTC-AAAAATTACTTTAGTGTGTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAA i saiBol1.JH378145 I 5 C 0 s cebCap1.NW_016107540v1 1391310 336 + 3566421 -----ATACAATTTTATTCGAATAATTTAAAA--TTTTAAATAACTCCCAAGATTCATTTAAAGGAATAAACA-------------------------------------TGTATACCAGCAATAAAGA----AAGAAGC--------------------------------------------------------------------------------------------AAGAGTATACTAAACTAGTACTAACTTGCTATTAAAATAAA------TTTGTAAAC-TTAGTAACTAAAGCTTTCCAGTCCCAATTT-GGAGCACTAGAATTTAGGTAGATGGGATCC--CAATAGAATAAAGGCCCCAAA---------TAGACCCTTCTATGCACGAGAGCTTAGGATGTG---CTTTAGAA-GTCATTGCCAAACCACTGTC-AAAAGTTACTTTAGTATCTTAGTCTTACTAGGTTTGAAAAACCAGAGAAAGT i cebCap1.NW_016107540v1 I 5 C 0 s aotNan1.NW_018514471v1 1893127 330 - 9267652 -----gtacaatttcattagTATAATTTAAAA--TTTTAAATAACTCCCAAGATTCATTTGAAGGAATAAACT-------------------------------------TGTATACCAGCAGTAAAGA----AAGAAGC--------------------------------------------------------------------------------------------AAGAGTACACTAA------ACTAATTTGCTATTAAAATAAA------TTTGTAAAT-TTAGTAACTAAAGCTTTCCAGTACTGATTT-GGAGTGCTGGAATTTAAGTATGTGGGATCC--CAATAGAATAAAGGCTCAAAA---------CAGACCCTTCTATGCACGAGAGCTTGGGATGTG---CTTTAGAA-GTCATTTCCAAACCACTGTC-AAAAGTTACTTTAGTGTCTTTGTCTTACTAGGTTTGGAAAGCTAGAGAAAAG i aotNan1.NW_018514471v1 I 5 C 0 s otoGar3.GL873564 12754700 341 + 14340318 -----ATAAAATTTTCTCAGTATTATTTAATGAGTTTTCAATAGCACCC-AGATTCATTTAAAAGAACAAATA-------------------------------------TATGTATCAGGAGGAAAGA----AAGAAAC------------------------------------------------------------------------------------------AAAAGAGAACACTGA------AATAAATTGCTATTGAAAAAAA------GATCAAACG-TTGAGAATTAAAACTACATAGTACTGACTTAGGAGTATTAGAATTGGGGTATATTTGGACT--TAA---AATAAGGGCTAAAAGTAGATCAAATAGACCGATCTATGCACGGGAGTTTAGGGTACT---ACTTAGGT-GACATTGTAAGACTATGGGGAAAAAATTAGGTTACGATCTTAGTCTTACTGGGTTTGAAGAGTCAGAGGAAAG i otoGar3.GL873564 I 165 C 0 s canFam3.chr18 51763745 327 - 55844845 -----AGACAATTTCATCAGTATAGCTCAGCAAATTTTAAATAAC-CCCAAGATTCATTTCAAAAAATAAATA-------------------------------------TGTATATTAGCAATAAAGA----GAAATTA--------------------------------------------------------------------------------------------AAGGATACATCAA------ACTCAATAACTATTAAAATAAA------TTATTAGGCATTAGTAACTGAAGCTATGAAGCATTGATTT----------AAGGATAAGTATATTGGATCCTGCAATCGAATAATAGCTAAAAA---------TGGACCTCTGTGTACATGTGAGTTTAGGACATAACTTTTTAGAT-AACATTGCCAAACAAGGGAC-AAAAGTTAGGTCTTTCTTATGGTCTTACT-GGCTTGAGGAATCAGAGGAGAG i canFam3.chr18 C 0 I 2140 s dasNov3.JH578441 1199869 449 + 1446996 GTCAAGCAAACTTTCTTTAGGATAGTTTAGCAAGTTTTAAA-GAATTTCAAGGTTCATTTAAAAGAAAATATATATGTAGATACCTATATATGCCTGTGTGTGTAATGTGTGTGTATTAGCAATTAAAAGTTTAggaaacagatgtagctcaagtggttgagcacctgcttcctatgtacaaggtcctgggttcaatccccagtaatgccaaaaaaaTTTTTTTTTTCCTAAAAGACTGCACTAG------ACTCAACAAGTATTAAAATAAAATAACTTATATAGCT-TTAGTAATTAAAG-TCAACAGTGCTGATTT-AGGG---------ATAGGTATGATGGAACA--CGGTAGAACAAA----GAAGT---------TAGAGTCC-----GCATGGGCATTTAGGACATG---CTTTAGCA-G-CATTTTCAGACAGTGGAC-ATAACTGGACTTATTATCATAGGCTTACT-GGCTTACAGA-----AGAAAAG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740474 769 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=226610.000000 s hg38.chrUn_KI270749v1 56825 70 + 158759 ACTCAAGACCACCATATAAGAGCA---AAACA---AAAGGACAGGGAGAGAATGTGAAGATACTGAAacattttac s panTro5.chr1 101902169 70 - 228573443 ACTCAAGACCACCATATAAGAGCA---AAACA---AAAGGACAGGGAGAGAATGTGAAGATACTGAAACATTTTAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521909 70 - 162613886 ATTCAAGGCCACCATATAAGAGCA---AAACA---AAAGAACAGGGAGAGAATGTGAAGATATGGAAACATTTTAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36518 69 - 126596 ACTCAAGA-CACCATATAAGAGCA---AAACA---AAAGGACAGGGAGAGAATGTGAAGATACTGAAACATTTTAC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772580 70 + 99891981 ACTCAAGGCCACTACATAAGAGCA---AAAGA---AAAGAACGGGGAGAGAATGTGAAGACACTGAAacattttac i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108114766 70 - 128169293 ACTCAAGGCTACCCTATGAGAGCA---AAACA---AAAGGACAGGGAGAGAATGTGAAGATATTTAAacattttac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732112 70 - 18371965 ACTCAAGGCTACCCTGTGAGAACA---AAATA---AAAGGACAGGGAGAGAATGTGAAGATACTTAAacattttat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391646 70 + 3566421 TCTCAAGACTACCCTATGAGAACA---AAACA---AAAGCACAGGGAGAGAATGTGaaggtacttcaacattttac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893457 70 - 9267652 ACTCAAGGCTACCCTATGAGAACA---AAATA---AGAGGACAGGGAGAGAATGTGAAGATACTGAAacattttac i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12755041 71 + 14340318 ACTCAAGGCCACAATACAACAGCA---AAAGAATCAACAGACAGGGAGAG-ATGTGGAtgttatggga-atttcac i otoGar3.GL873564 C 0 I 398 s dasNov3.JH578441 1200318 68 + 1446996 ----AGAGCAGTGATATGACAGCAGACAAATG---CAAGGACAGGGAAAGGCTGTAAAGAGAC-AATGcattttac i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740474 769 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=12634.000000 s hg38.chrUn_KI270749v1 56895 5 + 158759 gtaaa s panTro5.chr1 101902239 5 - 228573443 ATAAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521979 5 - 162613886 ATAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36587 5 - 126596 ATAAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772650 5 + 99891981 ataaa i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108114836 5 - 128169293 atgaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732182 5 - 18371965 gtgat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391716 5 + 3566421 atgaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893527 5 - 9267652 atgga i aotNan1.NW_018514471v1 C 0 C 0 s dasNov3.JH578441 1200386 5 + 1446996 ataaa i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740474 769 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e otoGar3.GL873564 12755112 398 + 14340318 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=896418.000000 s hg38.chrUn_KI270749v1 56900 290 + 158759 gttgtataaaacatcctttaaagaaaatgtaaagtttaggatatacaacaaaatcagca----gagccactaaataaat---------aaataggcattg-taaaacagcaagagaaaatttaaatggatttctaaaaaata---ttGACACCTATGATTTTTAAAATATGTTTA-------------------------AGAAATCCCGTATTTCACAGGGCAGCCTTTCACAACACAGATATGTTAGGACATAAAGGTCCTTCTGTTTTTAATTTACTAGAGTTTATAGGGTT-ACAAA-T------GTCTTCTACCCTTGTCTTTTGTC---TGATGGTG s panTro5.chr1 101902244 290 - 228573443 GTTGTATAAAACATCCTTTAAAGAAAATGTAAAGTTTAGGATATACATCAAAATCAGCA----GAGCCACTAAATAAAT---------AAATAGGCATTG-TAAAATAGCAAGAGAAAATTTAAATGAATTTCTAAAAAATA---TTGACACCTATGATTTTTAAAATATGTTTC-------------------------AGAAATCCCGTATTTCACAGGGCAGCCTTTCACAACACAGATATGTTAGGACATAAAGGTCCTTTTGTTTTTAATTTACCAGTGTTTATAGGGTT-ACAAA-T------GTCTTCTACCCTTGTCTTTTGTC---TGATGGTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108521984 290 - 162613886 GTTGTATAAAACATATTTTAAAGAAAATGTAAAGTTTAGGATATACATCAAAATCAGCA----GAACCACTAAATAAAT---------AAATAGGCATTG-TAAAATAGCAAGAGAAAATTTAAATGGATTTCTAAAAAATA---TTGACACCTATGATTTTAAAAATATGTTTA-------------------------AGAAATCCCGCATTTCACAGGGCAGCCTTTCACAACATAGAGATATTAGGACATAAATGTCCTTCTGTTTTTAATTTACTAGTGTTTATAAGGTT-AAAAA-T------GTCTTCTATCCTTGTCTCTTGTC---TGATGGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36592 290 - 126596 GTTGTATAAAACATCCTTTAAAGAAAATGTAAAGTTTAGGATATACATCAAAATCAGCA----GAGCCACTAAATAAAT---------AAATAGGCATTG-TAAAATAGCAAGAGAAAATTTAAATGGATTTCTAAAAAATA---TTGACACCTATGATTTTTAAAATATGTTTA-------------------------AGAAATCCCGTATTTCACAGGGCAGCCTTTCACAACACAGATATGTTAGGACATAAAGGTCCTTCTGTTTTTAATTTACTAGTGTTTATAGGGTT-ACAAA-T------GTCTTCTACCCTTGTCTTTTGTC---TGATGGTG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772655 290 + 99891981 gttgtataaaacatactttaaagaaaatgtaaattttaggatatacgtcgaaatcagca----gaaccactaaataaat---------aaataggcactg-taaaatagcaagaggaaatttaaatggatttctaaaaaata---ttGACACCTATGATTTTTAAAATATGTTTA-------------------------AGAAATCCCATATTTCACAGAGCAGCCTTTCACAACATAGATATTATAGGACATAAAGGTCCTTCTGTTTTTAATTTATTAGTGTGTATAGGGTT-AAAAA-T------GTCTTCTATCCTTGTCTCTTGTC---TGATGGTG i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108114841 285 - 128169293 gttgtataaaacttactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagca----gaaccactaaataaat---------aaataggcattg-taaaatagcaatagaaaatttaaatggatttctaaaaaATA---TCGACACCTATGATTTTTAATATATGTTTA-------------------------AAAAATCCTGTATTTCATAGGGCAGCCTCCCACAACATAAATACATTAGGACATTAATGTCCTTCTGTTTTTAATTTACTAGTGTTTCTATGGTT-AAAAA-T------GTCTT-----CTTGTCTCTTTTC---TTGTGGTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732187 315 - 18371965 gatgcataaaacttactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagca----gaaccactaaataaat---------gaataggcattg-taaaatagcaatagaagatttgaatagatttctaaaaaata---ttGACACCTATGatttttaatatatttttaacatatatttttatatttttaatataaaaatCCCATATTTCACACGGCAGCCTCCCACAACATAAAGACATCAGGACATTAATCTCCTTCTGTTTTTAATTTACTAGTGTTTATATGGTT-AAAAA-T------GTCTTCTATCCTTGTCTCTTTTC---TTGTGGTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391721 291 + 3566421 gaggcataaaacctactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagca----gaaccactaaataaat---------gaataggcattg-taaaatagcaatagaagatttaaatggatttctaaaaaATA---TCGACATCTATGATTTTTAACATATGTTTA-------------------------AAAAGTCCCGTATTTCACAGGGCGGCCTCCCACAACATAAATACATTAGGACATTAATGTCCTTCTGTTTTTAATTTACTAGTGTTTATATGGTTAAAAAA-T------GTCTTCTATCCTTGTCTCTTTTC---TTGTGGTG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893532 290 - 9267652 gttgtataaaactgactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagca----gaaccactaaataaat---------gaataggcattg-taaaatagcaatagaagatttaaatggatttctaaaaaATA---TCGACACCTATGATTTTTAATATATGTTTA-------------------------AAAAATCCCGTATTTCACAGGGCAGCCTCCCACAACATAAATACATTAGGACATTAATGTCTTTCTGTTTTTAATTTACCAGTGTTTATATGGTT-AAAAA-T------GTCTTCTATCCTTGTCTCTTTTC---TTGTGGTG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12755510 224 + 14340318 GTTGTATAAAATTCATTTTACAGAAACTTAATAATTAAGGATATTGATTATAATCTGTA----GAAAAACT-GCTAAAT---------AAATAGGCACTG-TAAAATGACCATATCAAATTTAAATGGATTTCTTAAACAGAG--TTGGGAA----------TAAAATGTCTTTA-------------------------A------------------------------------------------------AGGTTCTTTTTCTTTTCAACTAAGT--TGTTTATATAGTT-AAAAAGT------GTCTTCTATTCTTGTCTCTTTGC---TTATGTT- i otoGar3.GL873564 I 398 C 0 s dasNov3.JH578441 1200391 266 + 1446996 gtggtagaaaatgtactttaattaaactgaaaag-aaaggatgaatattgtaatccatatgagaaactactaaacaaatatatagataaaagaggtatagttaaaatggcactaaaATTTTAAAAAGGTTATCTAAAAAATAGTCCTACCAATCATGATTTCTTAAATATATCTC-------------------------ATA----------------------------ACAA--------------------AAAATCATTTTGTGTTAAATTAACTTGGGTTTATATGATA-AAATA-TTATGTATTCTTTCACCCTTAACTCCTTTCATTCTATGGC- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66740474 769 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=6600.000000 s hg38.chrUn_KI270749v1 57190 1 + 158759 C s panTro5.chr1 101902534 1 - 228573443 C i panTro5.chr1 C 0 C 0 s panPan2.chr7 108522274 1 - 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36882 1 - 126596 C i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66741243 1 - 72422247 C i ponAbe2.chrUn I 769 I 570 s nomLeu3.chr17 55772945 1 + 99891981 C i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115126 1 - 128169293 C i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732502 1 - 18371965 C i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392012 1 + 3566421 C i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893822 1 - 9267652 C i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12755734 1 + 14340318 C i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1200657 1 + 1446996 C i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=369012.000000 s hg38.chrUn_KI270749v1 57191 120 + 158759 AAAAAATTTTCATAAGCATGTATTTCTGAATGC---------------CTGATGGATTGACATATATAATATGCTGCTAGTATTAAAATATGTGTAGGAAAACACATCCAATCTTCTCACTGTTTACATAAATTC s panTro5.chr1 101902535 120 - 228573443 AAAAAATTTTCATAAGCATGTATTTCTGAATGC---------------CTGATGGATTGACATATATAATATGCTGCTAGTATTAAAATATGAGATGGAAATCGCATCCAATCTTCTCACTGTTTACATAAATTC i panTro5.chr1 C 0 C 0 s panPan2.chr7 108522275 120 - 162613886 AAAAAATTTTCATAAGCATGTATTTCTGAATGC---------------CTGATGGATTGACATATATAATATGCTGCTAGTATTAAAATATGTGATGGAAAACGCATCCAATCTTCTCACTGTTTACATAAATTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 36883 119 - 126596 AAAAAATTTTCATAAGCATGTATTTCTGAATGC---------------CTGATGGATTGACATATATAATATGCTGCTAGTATTAAAATATGTGATGGAAAACGCATCCAATCTTCTCACTGTTTACATAAA-TC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55772946 120 + 99891981 AAAAAATTTTCATAAGCATGTATTTCTGAATGC---------------CTGATGGATTGACATATATAATATGCTGCTAGTATTAAAATAGGTGACGGAAAATGCATCCAATCTTCTCACTGTTTACATAAGTTC i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115127 117 - 128169293 ---AAAATTTCATAAGCATGTATTTCTGAAGGT---------------CTGATAGATTGACATATATAACATGCTGCTAGTATTAAAACATGTGACTGAATACGCATCAAATCTTCCCACTATTTACATAAATTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732503 118 - 18371965 --AAAAATTTCATAAGCATGTATTTCTGAAGGC---------------CTGATGGATTGACATATATAACATGCTGATAGTATTAAAATATGTGACTGAATATGCATCAAATCTTCCCACTGTTTACATAAATTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392013 118 + 3566421 --AGAAATTTTATAAGCATGTATTTCTGAAGGC---------------CTGATAGATTGTCATATATAACATACTGCTAGTGTTAAAATATGTGGCTGAATATGCATCAAATCTTCCCACTGTTTACATAAATTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893823 118 - 9267652 --AAAAATTTCATAAGCATGTATTTCTGAAGGC---------------CTGATGGATTGACATATATAACATGCTGCTAGTATTAAAATATGTGACTGAATATGCCGCAAATCTTCCCACTGTTGACATACATTC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12755735 96 + 14340318 CAGAAATTTTCATTGGCATGTTTTTATGAAG---------------------------------------ACACTGCTGTTCCTGAAATGTGTGATTGAATATGTATCAGATCTCTTCGCTGTTCATTCACATTT i otoGar3.GL873564 C 0 I 127 s dasNov3.JH578441 1200658 134 + 1446996 CAGAAATTTTCACAAGtatatatatatatatatattttttaaCAAATGTTTATTAGTTATGATATCTATTGAGCTACTCTTAAGGAAA-ACGTGTTTGGATACCCATCGGGTTGTCTCAGTCTTGACTTAAATTC i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741244 570 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=99807.000000 s hg38.chrUn_KI270749v1 57311 33 + 158759 TAGGTTTCTCCTATTTACCTCAAGCACGTAtgg s panTro5.chr1 101902655 33 - 228573443 TAGGTTTCTCCCATTTACCTCAAGCACGTATGG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108522395 32 - 162613886 TAGGTTTCTCCTATTTACCTCGAGCACAT-tgg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 37002 33 - 126596 TAGGTTTCTCCTATTTACCTCAAGCACGTAtgg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773066 33 + 99891981 TAGGTTTCTCCTATTTACCGCGAGCACGTAtgg i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115244 33 - 128169293 TAGGTTTCTCCTATTTACCTTGAGCACATATGG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732621 33 - 18371965 TAGGTTTCTCCTATTTACCTTGAGCATATATGG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392131 31 + 3566421 TA--TTTCTCCTATTTACCTTGAGCACATATGG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893941 33 - 9267652 TAGGTTTCTCCTATTTACCTTGAGCACATATGG i aotNan1.NW_018514471v1 C 0 C 0 s dasNov3.JH578441 1200792 33 + 1446996 TAGAGCCCTCATATTTGCCTGAAAGACATACAT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741244 570 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e otoGar3.GL873564 12755831 127 + 14340318 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=63355.000000 s hg38.chrUn_KI270749v1 57344 33 + 158759 agcgaattcttac---------------------------------------------------cttttaatattgccatggca s panTro5.chr1 101902688 33 - 228573443 Tgcgaattcttac---------------------------------------------------cttttaatattgccatggca i panTro5.chr1 C 0 C 0 s panPan2.chr7 108522427 33 - 162613886 agtgaattcttac---------------------------------------------------attttaatgttgccacggca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 37035 33 - 126596 agcgaattcttac---------------------------------------------------cttttaatattgccatggca i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773099 33 + 99891981 agtgaattcttat---------------------------------------------------attttaatgttgtcatggca i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115277 76 - 128169293 AGTGAATTCTTAA--------CTTTTTTTCTTTTTTTGAGCCGGAGTGCGGGCCAaattcttacatttttatgttaccgtggca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732654 79 - 18371965 AGTGAATCCTTAC-----TTTTTTTTTTTTTTTTTTTGAGCTGGAGTGCAGGTCgaattcttacatttttatgttgccgtagca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392162 84 + 3566421 AGTGAATTCTTGCttttttttttttttctttttttttGAGCCAGAGTGCAGGCCgaattcttacatttttatgttgctgtacca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893974 76 - 9267652 AGTGAATTCTTAC--------TTTTTTTTTTTTTTTTGAGTCGGAGTGCGGGCCgaattcttacatttttctgttgccgtagca i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741244 570 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e otoGar3.GL873564 12755831 127 + 14340318 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=501851.000000 s hg38.chrUn_KI270749v1 57377 195 + 158759 ttcacattgaacataagttgaactct-ctcttatggtagctgggttcagattctcttgacaatttccagttctaac---cctcacagttcctcagtgtggct-ggcccaggtattgaccctacacagttgcctcctcctggtgactaccagctatggaaccgtttgatacaacctacctgactcaccccaca--------gacctcac s panTro5.chr1 101902721 195 - 228573443 ttcacattgaacataagttgaactct-ctcatatggtagctgggttcagattcccttgacaatttccagttctaac---cctcacagttcctcagtgtggct-ggcccagatattgaccctacacagttgcctcctcctggtgactaccagctatggaaccattggatacaaactacctgactcaccccaca--------gacctcac i panTro5.chr1 C 0 C 0 s panPan2.chr7 108522460 196 - 162613886 ttcacattgaacgtaagttgaacgct-gtcatgtggtagctggcttcagcttcccttgacaatttccaattctaac---cctcccagttcctcagtgcggctgggcccagatattgaccctacacagttgcctcctcctggtgactacccgctatggaacctttggatacaacctacctgactcaccccaca--------gacctcAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 37068 193 - 126596 ttcacattgaacataagttgaactct-ctcatatggtagctgggttcggattcccttgacaatttccagttctaac---cctcacagtt-ctcagtgtggt--ggcccagatattgaccctacacagttgcctcctcctggtgactaccagctatggaaccgttggatacaacctacctgactcaccccaca--------gacctcac i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773132 196 + 99891981 ttcacactgaatgtaagttgaactct-ctcatgcggtagctgggttcagcttcccctggcaatttccagttgtaac---cctcccagttcctcagtgcagctcggcccagatattgaccctacacagttgcctcctcctggtgactacccgctatggaatcgttgtatacaacctacctaacttaccccaca--------gacctcac i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115353 192 - 128169293 ttcacattgaatgtaagttgaactct-cttatatggtagttgagttcagtttcccttgacagtttccagttctaaccctcctcccagttcctcagt-------ggcccagataccgaccctgaacagttgcttcctcctggtgactagctgctatggaatgactggttataacctacctaactcaccctgca--------gacctcac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732733 191 - 18371965 ttgacgttgaat-taagtcgaactct-cttacatggtagttgggttcagtttcccttgacagtttccagttctaaccctcctcccagttcctcagt-------ggcccagatattgaccctaaacagttgccttctcccggtgactcgctgctacggaatgactggatataacctacctaactcaccctatg--------gacctcac i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392246 191 + 3566421 ttcacgttgaat-taagttgaactct-cttatgtggtagctgggttccgtgtccttggacagcatccggttctaatcctcctcccagttcctcagt-------ggcccagatattgaccctaaacagttgccttctcctggtgactagctgctatggaaagactggatatcacctacctaactcaccctaca--------gacctcac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894050 191 - 9267652 tacacgttgaat-taagttgaactct-cttatatggtagttgggttcagtttcccttgacagagtccagttctaaccctcctcccagttcctcagt-------ggcccagatattgaccccaaacagttgccacctcctggtgactagctcctatggaatgactggatataatctatctaactcacccgaca--------gacctcac i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12755958 195 + 14340318 TCCTCAGTGTGTGGGAGCTGATGTCCACTCCCATAGTGGCCACCTCCTGGTGACCCTCCCTAT-----GGtccagc---tcccccattt-ctcagtgtgtg--ggacctgatgtccactcc-catggtagctgcctcctggtgaccctcc-ctgtggcctagctggatatgacctactggactttccccccacaagggctgggcacat i otoGar3.GL873564 I 127 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741244 570 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=226644.000000 s hg38.chrUn_KI270749v1 57572 122 + 158759 agcgcacatggacagtctccacatgccagagtgacc----------tgcagcggga-gtcaagaaatgtgcc-tgctggcactcaccccacagactagtg--ccccgtggaaaacttatttgggtaatgttctcgg s panTro5.chr1 101902916 131 - 228573443 agcgcacatggacggcccccacacgccaaagtgacc--tgctcagttgcagcagga-gtcaagaaatgtgccttgctggcactcatcccactgactagtg--ccccatcaaaaacttatttgggtaatgttctggg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 37261 120 - 126596 agcgcacatggacag-ccccacacgccagagtgacc--tgctcggttgcagcggga-gtcaagaaatgtgc--tgctggcactcaccccac--actagg----cccgtgg-aaacttatt--ggtaatgttct-gg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773328 130 + 99891981 accccacatggacagcccccacatgccagagtgacc--tgctcagttgcagcggga-gccaagaaatgtgcc-tgctggcactcaccccactgactagag--ccccatggaaaacttttttgggtaatattctggg i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115545 131 - 128169293 aacccacacggacagtccacccatgccagactgacc--tgctcagttacagcgggaccccagggaatgtgcc-tgccggcactcacctcaccaactaaag--ccctgtgagaaacttgtatggctaatgttccgag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732924 130 - 18371965 agcccgcatggacagtccacccatgccagagtgacc--tgctcagttacagcaggaccccagggaatgtgcc-tgctggcactcaaccc-ccaactagag--ccctgtgagaaacttgtttggctaatgttccgag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392437 131 + 3566421 agcctacatggacagtccacccatgccagagtgacc--tgctcagttacagtgggaccccagggaatgtgcc-tactggcactcaccccaccaactagag--ccccgtgagaaacttgtttggctaatgttccgag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894241 131 - 9267652 agcccacatggacagtccactcatgccagagtgacc--tgctcagttacagtgggaccccagggaatgtgcc-tgctggcactcaccccatcaactagag--ccccgtgagaaacttgtttggctaatgttccgag i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12756153 113 + 14340318 ----------------------gagtcacagagaccacctctcagtcacagaatgactctggagctcacgcc-tgcctacaccaagcccacctgttacaagtccccatggaaaatctgcttacagaatgtcttggg i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741244 570 - 72422247 I e tarSyr2.KE946558v1 1028474 2762 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C e panPan2.chr7 108522656 0 - 162613886 C a score=1302.000000 s hg38.chrUn_KI270749v1 57694 1 + 158759 c s panTro5.chr1 101903047 1 - 228573443 c i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 37381 1 - 126596 c i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773458 1 + 99891981 c i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115676 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733054 1 - 18371965 t i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392568 1 + 3566421 t i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894372 1 - 9267652 t i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 1031236 1 - 1121937 c i tarSyr2.KE946558v1 I 2762 I 67 s otoGar3.GL873564 12756266 1 + 14340318 c i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741244 570 - 72422247 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C e panPan2.chr7 108522656 0 - 162613886 C a score=15284.000000 s hg38.chrUn_KI270749v1 57695 8 + 158759 -cctataaa s panTro5.chr1 101903048 8 - 228573443 -ccaataaa i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01000522v1 37382 8 - 126596 -ccaataaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773459 8 + 99891981 -ccaatgaa i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115677 8 - 128169293 -ccagtaaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733055 8 - 18371965 -ccagtaaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392569 8 + 3566421 -cccgtaaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894373 8 - 9267652 -ccagtaaa i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12756267 9 + 14340318 cctggtcac i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741244 570 - 72422247 I e tarSyr2.KE946558v1 1031237 67 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C e panPan2.chr7 108522656 0 - 162613886 C a score=114622.000000 s hg38.chrUn_KI270749v1 57703 40 + 158759 ggctggagtcccacagaccccttttctctctcctgctccc s panTro5.chr1 101903056 40 - 228573443 ggctggagtcccacagaccccttttctctctcctgttccc i panTro5.chr1 C 0 C 0 s panPan2.chr7 108522656 40 - 162613886 GGCTGGAGTCCCACAGACCCCTTTTCTCTCTCTTGCTCCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 37390 32 - 126596 -gctgga--tccacaaccc----ttttctctcctgct-cc i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773467 40 + 99891981 ggctggagtcccacagatcccttttctctctcttgctccc i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115685 40 - 128169293 gactggagtcccacagaccccttctgtctctcttgctccc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733063 40 - 18371965 gactagagtcccacagacctcttctgtctctcttgctccc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392577 40 + 3566421 gactggagtcccacagaccccttctgtctctcttgctccc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894381 40 - 9267652 gactggagtcccacagaccccttctgtctctcttgctccc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12756276 40 + 14340318 agctttagtcccactgattctctctctctctcatcccccc i otoGar3.GL873564 C 0 I 1501 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741244 570 - 72422247 I e tarSyr2.KE946558v1 1031237 67 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=29525.000000 s hg38.chrUn_KI270749v1 57743 10 + 158759 cactcATCTT s panTro5.chr1 101903096 10 - 228573443 cactcATCTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108522696 10 - 162613886 CACTCATCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 37422 10 - 126596 cactcATCTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773507 10 + 99891981 tacTTATCTT i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115725 10 - 128169293 cactcatctt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733103 10 - 18371965 cactcatctt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392617 10 + 3566421 tcctcatcTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894421 10 - 9267652 cactcatctt i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741244 570 - 72422247 I e tarSyr2.KE946558v1 1031237 67 - 1121937 I e otoGar3.GL873564 12756316 1501 + 14340318 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=3600.000000 s hg38.chrUn_KI270749v1 57753 1 + 158759 C s panTro5.chr1 101903106 1 - 228573443 C i panTro5.chr1 C 0 C 0 s panPan2.chr7 108522706 1 - 162613886 C i panPan2.chr7 C 0 C 0 s ponAbe2.chrUn 66741814 1 - 72422247 C i ponAbe2.chrUn I 570 I 1444 s nomLeu3.chr17 55773517 1 + 99891981 C i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115735 1 - 128169293 c i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733113 1 - 18371965 c i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392627 1 + 3566421 C i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894431 1 - 9267652 c i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e gorGor5.CYUI01000522v1 37432 0 - 126596 C e tarSyr2.KE946558v1 1031237 67 - 1121937 I e otoGar3.GL873564 12756316 1501 + 14340318 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=25359.000000 s hg38.chrUn_KI270749v1 57754 9 + 158759 CCCATTTTG s panTro5.chr1 101903107 9 - 228573443 CCCATTTTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108522707 9 - 162613886 CCCGTTTTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 37432 9 - 126596 CCCATTTTG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773518 9 + 99891981 CCTGTTTTG i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115736 9 - 128169293 ctcattttg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733114 9 - 18371965 ctcattttg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392628 9 + 3566421 CTCATTTTG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894432 9 - 9267652 ctcattttg i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031237 67 - 1121937 I e otoGar3.GL873564 12756316 1501 + 14340318 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=58549.000000 s hg38.chrUn_KI270749v1 57763 18 + 158759 TTCAGCCGTATGAGGTGT s panTro5.chr1 101903116 18 - 228573443 TTCAGCCCTATGAGGTGT i panTro5.chr1 C 0 C 0 s panPan2.chr7 108522716 18 - 162613886 TTCAGCCCTATGAGGTGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 37441 18 - 126596 TTCAGCCCTATGAGGTGT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773527 18 + 99891981 TTCAGCCCTATGACGTGT i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115745 18 - 128169293 ttcagccctatgaggtat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733123 18 - 18371965 ttcagccctatgaggtgt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392637 18 + 3566421 TTCAGCCCTATGAGGCGT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894441 18 - 9267652 ttcagccctatgaggtgt i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 1031304 18 - 1121937 gttgggcatgggaggcat i tarSyr2.KE946558v1 I 67 I 4664 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e otoGar3.GL873564 12756316 1501 + 14340318 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=986490.000000 s hg38.chrUn_KI270749v1 57781 387 + 158759 GCTACtgtattagtccattttcacaccaccggtaaagatatgcccaagactgggtaatttccataagaaagaggtttaatagacgcacagttccacatggctgggtaggcctcatattcatggtgcaaggtgaaaggcacgtctcacatgacagc-----agacaagagagcttgtgcagggaaactcccctttaaaaaaccatcagatcttgtgagacttattcactatcagaataacagcatgggaaagacctgcccccatgattcaattacctcccacctgttccctcccacaacatgtgggaattcaaaatgagatttggctggggacacagctaaaccCTCTTCTCAgctacccttttctctctcgatctgtgagtaataaacctac s panTro5.chr1 101903134 392 - 228573443 GCTACtgtattagtccattttcacaccaccggtaaagacatgcccaagactgggtaatttccagaagaaagaggtttaatagacgcacagttccacatggctgggtaggcctcacaatcatggcgcaagctaaaaggcacgtctcacatggcagcagacaagacaagagagcttgtgcagggaaacccccctttataaaaccatcagttcttgtgagacttattcactatcagaagaacagcatgggaaagacctgcccccatgattcacttacctcccacctgttccctcccacaacatgtgggaattcaagatgagatttggctggggacacagctaaaccCTCTTCTCAgctaccctcttctctctggatctgtgagtaataaacctac i panTro5.chr1 C 0 C 0 s panPan2.chr7 108522734 392 - 162613886 GCTAAtgtattagtccattttcacactgctgataaagacatgcccaagactgggtaatttccagaagaaagaggtttaatagacgtacaattgcatacagctgggtaggcctcacaatcatggtggaaggtgaaaggcacgtctcacatggcagcaaacaagacaagagagcttgtgcaaggaaactcccctttataaaaccatcagatcttgtgagacttattcactatctgaagaacagcatgggaaagacctgcccccatgattcaattacctcccacctgttccctcccataacatgtgggaattcaagatgagatttgtctggggacacagccagaccCTCTTCTCAgcttccctcttctctctggatctgtgagtaataaaactac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 37459 388 - 126596 GCTACtgtattagtccattttcacac-gccggtaaagacatgcccaagactgggtaatttccagaagaaagaggtttaatagatgcacagttccacatggctgggtaggcctcacaatcatgg-gcaagctgaaaggcacgtctcacatggcagcagacaagacaagagagcttgtgcagggaaactcccctttataaaaccatcagatcttgtgagacttattcactatcagaagaacagcat-ggaaagacctg-ccccatgattcaattacctcccacctgttccctcccacaacatgtgggaattcaagatgagatttggctggggacacagctaaaccCTCTTCTCAgctaccctcttctctctggatctgtgagtaataaacctac i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773545 387 + 99891981 GCTACtgtattagtccattttcacactgccgataaaaacatgcccaagactgtgtaatttccagaagaaagaggtttaatagatgtacagttgcacatggctgggtaggcctcacaatcatggtggaaggtgagaggcacatctcacgtggcagc-----agacgagagagcttgtgcaaggaaaccctcctttataaaaccatcagatcttgtgagacttattcactatcagaagaacagcatgggaaagacctgcccccaggattcaattacctcccacctgttccctcccacaacatgtgtgaattcaagatgagatttggctggggacacagccaaaccCTCTTCTCAgctaccctcttctctctggatctgtgagtaataaaactac i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108115763 388 - 128169293 gttactgtattagtccgttttcacactgcccataaagacatgcccaagaatgaggaatttacagaagaaacaggtttaacagactcaca-ttccacatggctggggaggcctcacaatcatggtggaaggtgaaaggcacattccacctggcagcagacaagagaagagagcttgtgcagagaacctcccctttataaaagcatcagatcttcggagacttattcaatatcacaataacaggatgggaaagacttgcctccatgattcagttacttcccaccctgtccctcccaaaatatgtgggaattcaagatgagatttggctggggacacagccaaacca---tatcaactaccctcttctctctggatctgtgagtaataaaactgt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733141 388 - 18371965 gttactgtattagtccgttttcacactgcccataaagacgtgcccaagactgaggaatttacagaagaaagaggtttaacagacttaga-ttccacatggctggggaggcctcagaatcatggcagaaggtgaaaggcatgtctcacgtggcagcagacaagagaagagagcttgtgcagggcaactcccctttataaaagcatcagatcttgggagacttattcaatatcacaagaacaggatgagaaagacctgcccccatgattcagttacttccaaccctgtccctcccaaaatatatgggaattcaagatgagatttggctggggacacagccaaacca---tatcacctaccctcttctctccggatctgtgagtaataaaactgt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392655 315 + 3566421 GTTACtgtattagtccgttttcacgctgcccataaagacatgcccaagactgaggagttgacagaagaaagaggtttaacagacttaca-ttccacatggctggggaggcctcacaatcacggtggatggtgaaaggcatgtctcacgtggcagcagacaagagaagagagcttgtgcagggaaactctcctttataaaagcatcagatcttgggagacttattcaatatcacaagaacaggatgggaaagacctgcctccatgattcagttacttcccaccctgaccctcccaaaatacatggg----------------------------------------------------------------------------aataaaactgt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894459 388 - 9267652 gttactgtattagtccgttttcacgctgcccataaagacatgcccaagactgaggaatttacagaagaaagaggtttaacagacttaca-ttccacatggctggggagaccgcgcaatcatgggggaaggtgaaaggcacgtctcacgtggcaacagacaagagaagagacattgtgcagggaaactcccctttataaaagcatcagatcttgggagacttattcaatatcacaagaacaggatgggaaagacctgcccccatgattcagttacttcccaccatgtcccttccaaaatatgtgggaattcaagatgagatttggctggggacacagccaaacca---tatcaactaccctcttctctctggatctgtgagtaataaaactgt i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12756316 1501 + 14340318 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=139290.000000 s hg38.chrUn_KI270749v1 58168 45 + 158759 ttctgtgatttcccatgctttgttctgtggcctccatgggtctga----- s panTro5.chr1 101903526 45 - 228573443 ttctgtgatttcccatgtttggttctgtggcctccatgtgtctga----- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108523126 45 - 162613886 ttctgtgatttcccatgtttggtcctgtggcctccatgtgtgtga----- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 37847 45 - 126596 ttctgtgatttcccatgtttggttctgtggcctccatgtgtctga----- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773932 45 + 99891981 ttctgtgatttcccatgtttgttcctgtggcctccatgtgtctga----- i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108116151 45 - 128169293 ttctgtgatttcccatgtttggtcctgtggcctccatgtgtctga----- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733529 45 - 18371965 ttctgtgatttcccatgtttggtcctgtggcctccatatatctga----- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392970 45 + 3566421 ttctgtggtttcccatgtttggtcctgtggcctccatgtgcctga----- i cebCap1.NW_016107540v1 C 0 I 9 s aotNan1.NW_018514471v1 1894847 45 - 9267652 ttctgtgatttcccatgtttggtcctgtggcctccatgtgtctga----- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12757817 46 + 14340318 tcctgtcactccatgtgctt--tcttgtg--cttcctgctttgggacttg i otoGar3.GL873564 I 1501 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=12135.000000 s hg38.chrUn_KI270749v1 58213 9 + 158759 gctgaccta-- s panTro5.chr1 101903571 9 - 228573443 gctgaccta-- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108523171 9 - 162613886 tctgaccta-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 37892 9 - 126596 gctgaccta-- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773977 9 + 99891981 tctgaccta-- i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108116196 9 - 128169293 tatgacctg-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733574 9 - 18371965 tacaacctg-- i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1894892 9 - 9267652 tacaacctg-- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12757863 11 + 14340318 tctgaccaata i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e cebCap1.NW_016107540v1 1393015 9 + 3566421 I e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=716338.000000 s hg38.chrUn_KI270749v1 58222 304 + 158759 cactggaacctcactctcc-------acctggccagggtctc-tgag-agtgg--ctcttgtcagaaatacacaggacacaggtcaggcaacagtcacc--a-ggcatctcctagtctcaacagatattctgtgagagggaggcctggtcgtggta---tgcacacct-ggccac--tgctggggtaaggaagtgtcctg--tgaaa-ggca----catgttaagcatccacaa--tgccctgacc-agaaccccagaaag-gca-g---ggctccaa-ttgacagtcac--tctccagagacaaacctcgagccc--taactg-gaggaaaagaaaaca-ATGTA s panTro5.chr1 101903580 326 - 228573443 cactggaacctaactctcctcctgctccctggccagggtctcttgagtagtgg--ctcttg-cagaaatacacaggacacaggtca-gcaacagtcacctta-ggcatctcctagtctcaacagatgttc-gtgataaggaggct--gttg-ggca---tgcacacctaggccacattgctggggt-aggaagtgtcctcgttgaaagggcatcatcatg-taagcgtccacaacctcccctgacctagaaccccagaacgcgcagg---ggctcaca-tcgacagtcactatctacagagac-aacctcaagCGCCATAACTGAGAGACAAAAAAAAAA-CTGTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 108523180 304 - 162613886 cactggaacctaactctcc-------tcctggccagggcctc-tgag-agtgg--ctcttgtcagaaatacacaggacacaggtcaggcaacagccacc--a-ggcatctcctagtctcaacagatattctgtgagagggaggcctggtcgtggga---tacacacct-ggtcac--tgctggggtaagggagtgtcctg--tgaaa-ggca----tatgttaagcatccacaa--ccccctgccc-agaaccccagaaag-gca-g---ggctccaa-ttgacagccac--tctccagagacaaacctcaagccc--taactg-gaggaaaattaaaca-ATGTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 37901 302 - 126596 cactggaa-ctaactctcc-------tcctggccagggtctc-tgag-agtgg--ctcttgtcagaaatacacaggacacaggtcaggcaacagtcacc--a-ggcatctcctagtctcaacagatgttctgtgagagggaggcctggtcgtggga---tgcacacct-ggccac--tgct-gggtaaggaagtgtcctg--tgaaa-ggca----catgttaagcatccacaa--ccccctgacc-agaaccccagaaag-gca-g---ggctccaa-ttgacagtcac--tctccagagacaaacctcaagccc--taactg-gaggaaaagaaaaca-ATGTA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55773986 298 + 99891981 cactggaacctaactctcc-------tccttgccagggtctc-tgac-agtgg--ctcttgtcagaaatacactggacacaggtcaggcaacagccacc--a-ggcatctcctagtctcaacagatggtctgtgagagggaggcctggtcgtggga---tacatacct-ggccac--t------ttaaggaagtgtcctg--taaaa-ggca----catgttaagcatgcacaa--ccccctgccc-agaaccccaaaaag-gca-g---ggctccaa-ttgacagccac--tctccagagacaaacctcaacccc--taactg-aaggaaaataaaaca-GTGTA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108116205 291 - 128169293 cactggaacctaactctcc-------tcctggccagggtctc-tgag-agtggctctcttgtcagaaatacactggatacaggtcagacaatggcatcc--a-ggcacctgctagtttcaatggatattctg---------------gttgtggga---tgcagacat-ggaccc--tgccggggtgaggaagtgtcctg--tgaaa-ggca----tatgctaagcatccacaa--ccacctgccc-agaaccccagaaag-gaa-g---ggcttgaa-tttacagccac--tctccagacacaaacctcaagccc--taatta-gaggaaaataaaaca-GTGTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733583 291 - 18371965 cactggaaccttactctcc-------tcctggccagggtctc-tgag-agtggctctcttgtcagaaatacactggatactgattagacaatggtctcc--a-ggcaactgctagtctcaacggatattctg---------------attgtggga---tgcacacct-agcttc--tgtcagggtgaggaagtgtcctg--tgaaa-ggca----catgctaagcatccacaa--ccacctgcca-agaaccccagaaag-gca-g---gacttgaa-tttacagccac--tctccagacacaaacctcaagccc--taatta-gaggaaaataaaacC-AGGTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1393024 291 + 3566421 caccggaacctaactctcc-------tcctggccagggtctc-tgag-agtggctctcttgtcagaaatacaccggatacaggtcggacaacagcctcc--a-ggcacctgctggtctcaacggatagtcta---------------gttgtggga---tgcacacct-ggaccc--tgtcgggatgaggaagtgtcctg--cgaaa-ggca----catgctaagtatccacaa--gcacctgccc-agaaccccagaaag-gca-g---ggcttgag-tttagagccac--tctccagacaccaacctcaagccc--taatta-gaggaaaataaaacT-AGGTA i cebCap1.NW_016107540v1 I 9 C 0 s aotNan1.NW_018514471v1 1894901 295 - 9267652 cactggaacctaactctcc-------tcctggccagggtctc-tgag-agtggctctcttgtcagaaatatactggatacaggtcagacaatggcctcc--a-ggcacttgctagtctcaacggatattctg---------------gctgtggga---tgcacacct-ggcccc--tgtcggggtgaggaagtgtcctg--tgaaa-ggcacatgcatgctaagcatccacaa--ccacctgccc-agaaccccagaaag-gcg-g---ggcttgaa-attatagccac--tctccagacacaaacctcaagcgc--taatta-gaggaaaataaaacT-AGGTA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12757874 302 + 14340318 cacaagaacccaactctcc-------tcccagtcagggtctc-ctag-tgaggggtgtctggaaagaataccctgggcatgagtcagacaagaatgaca--agggcacctgtcagcataaacaagtttcctgtgaca-ggacacctggtcgtgggggttctctgaagt-agctac-ctgccaggatgaggaagcacccc---cggaa-ggtt----cactgtggaca--ctcca-------------agagccccatcaaa-gca-ggctggctggcacttaacaaccat--tttcgagagagagacagcgagacc--tgatta-gagggaaataaaacTCATGAA i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e dasNov3.JH578441 1200825 0 + 1446996 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=5061.000000 s hg38.chrUn_KI270749v1 58526 5 + 158759 AAAAG-- s panTro5.chr1 101903906 5 - 228573443 AAAAG-- i panTro5.chr1 C 0 C 0 s panPan2.chr7 108523484 5 - 162613886 AAAAT-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 38203 5 - 126596 AAAAG-- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55774284 5 + 99891981 AAAAT-- i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108116496 5 - 128169293 AAAAT-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733874 5 - 18371965 AAAAT-- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1393315 5 + 3566421 AAAAT-- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1895196 5 - 9267652 AAAAT-- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12758176 5 + 14340318 TCTTT-- i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1200825 5 + 1446996 --AATAA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e canFam3.chr18 51764072 2140 - 55844845 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=628957.000000 s hg38.chrUn_KI270749v1 58531 230 + 158759 TTGAATTTATCTTACTATTTCAATGAT--CCAGTAAAGACATTTTATGCCT--GTACACCACATATTTTCTTCGATTGTGGATTT-ATTTTAGATAGAATTTTATGTCTG-GCTTTCACTTTA--GCCTGGT--CCTTACCTCA-AGCATAAG--GTAAAGATTTTCCAT-GGGTTCTTTTCTGTTACTACTA-CCTGCCAGTGTGGGGTCATGTC-CT-AGTCTA-TCT---------------------------TGAGGGAACCCCC-------------CTATT------------- s panTro5.chr1 101903911 240 - 228573443 TTGAATTTATCTTTC-ATTTC-ATGATGGGCAGTAAAGACATTCTATGCCTGGGTGTAACACATATTTTCTTTGAGTTGGGATTTAATTTTAGATAGAATTTTAGGTCTGTGCTTTCACTTTAGGGCCTGGTCGCCTAACCTCATAGCATAAG--GTAAAGA--TTCCATCGCATTCTTTTTTGGTACTACTACCCTGGCAGTGT-GGGTCATGTCGCTAAGTCAG-TCT---------------------------TGAGGGAATTCCC-------------CTGTT------------- i panTro5.chr1 C 0 I 10 s panPan2.chr7 108523489 230 - 162613886 TTGAATTTATCTTACTATTTCAATGAT--CCAGTAAAGACATTCTATGCCT--GTACACCACATATTTTCTTCAATTATTGATAT-ATTTTAGATAGAATTTTATGTCTG-GCTGTCACTTTG--GCCTGGT--CCCTATCTCA-AGTATAAG--GTAAAGATTTTCCAT-GGGTTCTTTTCTGGTACTACTA-ACTGCCAGTGTGGGGTCATGTC-CT-AGTCTA-TCT---------------------------TGAGGGAACCCCC-------------CTATT------------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 38208 230 - 126596 TTGAATTTATCTTACTATTTCAATGAT--CCAGTAAAGACATTCTATGCCT--GTACACCACATATTTTCTTTGATTGTGGATTT-ATTTTAGATAGAATTTTAGGTCTG-GCTTTCACTTTA--GCCTGGT--CCCTACCTCA-AGCATAAG--GTAAAGATTTTCCAT-GCGTTCTTTTCTGGTACTACTA-CCTGCCAGTGTGGGGTCATGTC-CT-AGTCTA-TCT---------------------------TGAGGGAATCCCC-------------CTGTT------------- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55774289 230 + 99891981 TTGAATTTATCTTACTATTCCAATGAT--CCAGTAAAGACATTCTATGCTT--GTACACCACATATTTTCTTCGATTATTGATAT-ATTTTAGATAGAATTTTATGTCTG-GCTTTCACTTTG--GCCTGGT--CCCTACCTCA-AGCATAAG--GTCAAGATTTTCCAT-GGGTTCTTTTCTGGTGCTACTA-CCTGCCGATGTGGGGTCATGTC-CT-AGTCTA-TCT---------------------------TGAGGGAACCCCC-------------CTGTT------------- i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108116501 256 - 128169293 CTGAATTTATCATACTATTTCATTGAT--CTATTAGAGATATTCCACACCT--GTAAACCACATATTTTCTTCGATTGTTAATAT-AGTTTAGATAGAATTTCATATCT--GCTTTCACTTTG--GTCTGGT--CTCTACCTCA-ACTATATA--GTAAAGACTTCTGGT-GGGTTCTTTTCTTGTACTACTG-CCTACCAGTGTGGGGTCATGTC-CT-CATCTG-TCTTGGACTAGGGACACCTAGTCCAATGAATGAGGGAACACCC-------------CTGTT------------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733879 215 - 18371965 TTGAATTTATCGTACAATTTCATCAAT--CTAT--------------GCCT--GTACACCACATATTTTCTTCGACTGTTAATAT-ATTTTGGATAGAATTTCATGTCT--GCTTTTACTTTG--ATCTGGT--CTCTACCTCG-ACTATATA--GTAAAGACTTCCGGT-GGGTTCTTTTCTGGTACTACTA-TCTACCAGTTTGGGGTCATGTC-CT-AGTCTA-TCT---------------------------TGAGGGAATCCCC-------------CTGTT------------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1393320 229 + 3566421 TCAAATTTATCATACTATTTCATTGAT--CTGTTAGAGACATTCTATGCCT--GTACACCACACATTTTCTTCGATTGTTAATAT-ATTTTAGATAGAATTTCGTGTCT--GCTTTCACTTTG--ATCTGGT--CTCTACCTCA-ACTATATA--GTAAAGACTTATGGT-GGGTTCTTTTCTGGTACTACTA-TCTACCAGTGTGGGGTCATGTC-CT-AGCCTA-TCT---------------------------TGAGGGAACTCCC-------------CTGTT------------- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1895201 229 - 9267652 TTGAATTTATCATACTATTTCATTGAT--CTATTAGGGACATTCCATACAT--GTACAGCACATATTTTCTTCGGTTGTTAATAT-ATTTTAGATAGAATTTCATGTCT--GCTTTCACTTTG--GTCTGGT--CTCTACTTCG-ACTATATA--GTAAAGACTTCTGGT-GGGTTCTTTTCTGGTGCTACTA-TCTACGAGTGTGGGGTCATGTC-CT-AGTCTA-TCT---------------------------TGAGGGAACCCCC-------------CTGTT------------- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12758181 222 + 14340318 TTAAACTGATCA-ACCGCTTTGCCAGT--CCAACAGCAGCATTCTATTTCT-------CTGCACATTTTCTTCAATTGTTGATGT-ATTTTGGTTAAAATTCCATGCCT--GGTTTTCTCTTG--GCCTGGT--CTCTACCTCC-AGTGCACA--ACACAG-CTTCCTGT-GGGTTATTTTCTGGTA-------------GGTTTGCGGTCATGTC-CT-GATCTG-TCC---------------------------TCAGGGAACCCTC-TGCTGGGGAACACTGTT------------- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51766212 229 - 55844845 TTGGATTTACCTTACAGTTCCATTGAT--CCAGTAGTGACATTTTTTCCCT--TTACACTATGAA-TTTCTCTGATTGTTGATAC-GTCTTACGTAGAATCT---------GGTTTCTGTGTG--GCCCAGT--CTCTACCTCA-CAGCTGCA--GTGTGG-CTTTCCCT---GTTATGTTCTGA-ACCACTG-CCTGCAGGTCTGTGGGCACATC-CT-GACCCA-TCT---------------------------GTAGGGAAGTCTGATGGTGGAGAAA-CTGTT------------- i canFam3.chr18 I 2140 C 0 s dasNov3.JH578441 1200830 243 + 1446996 TTGGGTTCATTCTGATATGCTATTGGT--CCTGCAGTAGCATTTTATTTAC--ATACATTATGTATTTTCTTCAGCTGTTGATAG-GTTTTAGCAAGAAGTCTCGTTCCA-GCTCTCTCCGTG--GTGTGGT--GTCGACCTTG-AGCACACACCGTGTGG-CCGTCTCT-GGGTGCTGTCCACATCCTCC---GCCTCTTGTCTGTGGTTGTGGT-GT-GACACATTCC---------------------------TGGGGGAGCCCTT-------------GTGCTGGACAGCACAATT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=22442.000000 s hg38.chrUn_KI270749v1 58761 6 + 158759 CATTAT s panPan2.chr7 108523719 6 - 162613886 CATTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 38438 6 - 126596 CATTAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55774519 6 + 99891981 CATTAT i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108116757 6 - 128169293 CATTAT i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 734094 6 - 18371965 CATTAA i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 1393549 6 + 3566421 CATTAT i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 1895430 6 - 9267652 CATTAT i aotNan1.NW_018514471v1 C 0 I 1 s otoGar3.GL873564 12758403 6 + 14340318 CATTAT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51766441 6 - 55844845 CATTAT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1201073 6 + 1446996 CATGAG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C e panTro5.chr1 101904151 10 - 228573443 I a score=562033.000000 s hg38.chrUn_KI270749v1 58767 188 + 158759 TGTCAGAGTGAGACTGTT-AAGTCTTGATTTCCCTGGACAACTTCACTGCATGA--C--TTTTAATATGATTTTTTTTAAT----AGACCCTTTACTGGGCAATAAATTATATAGTTATC-TGAGTAAGAGATATGGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCTC-TTTGGTGAACTCGCATATGTTCTC-CTC s panTro5.chr1 101904161 189 - 228573443 TGTCAGAGTGAGACTGTTCAAGTCTTGATTTCCCTGGAC-ACTTCACTGTATGA--C--TTTTAATATGATTTTTTTTAAT----AATACCTT--CTGGACAATAAATTCTATAGTTATCATGAGTAAGAGATATGGTCAGAAGAGGGCATTGCCTCATTCAGCTTTTCTCTTTTGGTGAACCGCCATATGTTCTCGCTC i panTro5.chr1 I 10 C 0 s panPan2.chr7 108523725 186 - 162613886 TGTCAGAGTGAGACTGTT-AAGTCTTGATTTCCCTGGACAACTTCACTGCATGA--C--TTTTAATATGA--TTTTTAAAT----ATACCCTTTACTGGACAATAAATTGTATAGTTACC-TGAGTAAGAGATATGGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCTA-TTCGGTGAACTCGCATATGTTCTC-CTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 38444 185 - 126596 TGTCAGAGTGAGACTGTT-AAGTCTTGATTTCCCTGGACAACTTCACTGCATGA--C--TTTTAATATGA--TTTTTTAAT----ATACCCTTTACTGGACAATAAATTATATAGTTATC-TGAGTAAGAGATATGGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCT--TTTGGTGAACTCGCATATGTTCTC-CTC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55774525 186 + 99891981 TGTCAGAGTGAGACTGCT-AAGTCTTGATTTCCCTGGACAACTTCATTGCATGA--C--TTTTAATGTGA--TTTTTAAAT----ATACTCTTTACTGGACAATAAATTATATAGTTAGC-TGAGTAAGAGATATGGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCTG-TTTGGTGAACTCGCATATGTTCTC-CTC i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108116764 162 - 128169293 GGGCAGAGTGAGAC-----A--------------------ACTTCATTGCATGA--C--TTCTAATATGA--TTTTTAAAT----ATACCCTTTACTGGACAATAAATTATATGGTTACC-TGAGTAAGAGATATGTCCAGCAAGAGGCATTGCCTCATAGAGCTTTTCTA-TCTGGTGAACTCACATACATTCAC-CTC i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 734101 162 - 18371965 GGGCAGAGCGAGAC-----A--------------------ACTTCATTGCATGA--C--TTCTAATATGA--TTTTTAAAT----ATACCCTCTACTGGACATTAAATTATGTGGTTACC-TGAGTAAGAGATACATCCAGCAAGAGGCATTGCCTCATAGAGCTTTTCTG-TCTGGTGAACTCACATACATTCTC-CCC i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1393556 159 + 3566421 GGGCAGAGTGAG----------------------------ATTTCATTGCATGA--C--TTCTAATATGA--TTTTTAAAT----ATACCCTTTACTGGACAATAAATTATATGGTTACC-TGAGTAAGAGATATGTCCAGCAAGAGGCATTGCCTCATAGAGCTTTTCTA-TCTGGTGAACTCACATACATTCTC-CTC i cebCap1.NW_016107540v1 I 1 C 0 s aotNan1.NW_018514471v1 1895437 162 - 9267652 GGGCAGAGTGAGAC-----A--------------------ACTTCATTGCATGA--C--TTCTAATATGA--TTTTTAAAT----ATACCCTTTACTGGACAATAAATTGTATGGTTACC-TTAGTAAGAGATATGTCCAGCAAGAGGCATTTCCTCATAGAGCTTTTCTA-TCTGGTGAACTCACATACGTTCTC-CTC i aotNan1.NW_018514471v1 I 1 C 0 s otoGar3.GL873564 12758409 182 + 14340318 GGGTAGACGGAGACTGCC-AAGTCTTGATTTCCCAGGACAACCTCACTGTATGAGTA--TTTCAATACAA--TTTTCAAAT----GTGTCCCAGATGGGAAAATAAATTATGTGGCTATC-TGAGTAAGAGATACGGTCAGGAAGAAGCAGGGCCTCGTACAG-TTTTCTG-TTGGATGAACTCATGTATGTTC------ i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51766447 172 - 55844845 GGGCAGAGTGAAAT--CC-AAATCTTCATTTCCTAGGATAGCTTCACTGTAGAA-------------TAA--TTTTTAAGT----ATGCTCCATTTTGTATGATAAGTTTTGTGGCTATC-TGAGCTAGAAATCCAGGCAGGAGGAAAC-TTACCTCATACCAACTTTCTA-TCCAGTGAG-TCACACATGTTTTA-TC- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1201079 191 + 1446996 AGTCAAAGTGAGACCGCC-ATATCCTAATTTCC-AGGACACCTTCACTTTAAGA--CAGCTGTAATTTAA--TTCTCCAATTAAATTGCTCCATTTTGGACAGTACATTTTATGGTCACC-TGAGCAAGAAATATAAACAGGAAGAAGCATTGCCTTACACAGATTCTTTA-TTTGGGGAAGCTACACATGTTCTC-CTA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e colAng1.NW_012115910v1 1754634 0 + 6934359 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macFas5.chr3 67302578 0 + 192294377 C a score=36738.000000 s hg38.chrUn_KI270749v1 58955 5 + 158759 -ACCC-G s panTro5.chr1 101904350 6 - 228573443 -ACCCTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 108523911 5 - 162613886 -ACCC-A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 38629 5 - 126596 -ACCC-G i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55774711 5 + 99891981 -ACCC-A i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472894 5 - 185818997 -ACCC-A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302578 5 + 192294377 -ACCC-A i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784438 5 + 3123512 -ACCC-A i macNem1.NW_012011522v1 C 0 C 0 s chlSab2.chr21 5710798 5 + 127223203 -ACCC-A i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171384 5 - 1799296 -ACCC-A i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754634 5 + 6934359 -ACCC-A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108116926 5 - 128169293 -ACTC-A i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734263 5 - 18371965 -ACTC-A i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1393715 5 + 3566421 -ACTC-A i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1895599 5 - 9267652 -ACTC-A i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51766619 5 - 55844845 -ACCT-A i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1201270 6 + 1446996 TCCTC-T i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12758591 0 + 14340318 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I a score=426992.000000 s hg38.chrUn_KI270749v1 58960 48 + 158759 CCAGTCAC-CTCTAAACTGTATTGTTCCAAGACAACAAACAGAACTCGA s panTro5.chr1 101904356 47 - 228573443 CCAGTCAC-CTCTAAACCGTATTGTTCCAAG-CAACAAACAGAACTCGA i panTro5.chr1 C 0 N 0 s panPan2.chr7 108523916 48 - 162613886 CCAGTCAC-CTCTAAACCATATTGTTCCAAGACAATAAACAGAACTTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 38634 48 - 126596 CCAGTCAC-CTCTAAACCGTATTGTTCCAAGACAACAAACAGAACTCGA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55774716 48 + 99891981 CCAGTCAC-CTCTAAACCGTATTGTTCCAAGACAACAAACGGAACTTGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472899 48 - 185818997 CCAGTCAT-CTCTAAACCCTGTTGTTCCAAGACAATATACAGAACTCGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302583 48 + 192294377 CCAGTCAT-CTCTAAACCCTGTTGTTCCAAGACAATATACAGAACTCGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784443 48 + 3123512 CCAGTCAT-CTCTAAACCCTGTTGTTCCAAGACAATATACAGAACTCGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505123 48 + 10077455 CCAGTCAT-CTCTAAACCCTATTGTTCCAAGACAATATACAGAACTCGA i cerAty1.NW_012000909v1 I 4 C 0 s chlSab2.chr21 5710803 48 + 127223203 CCAGTCAT-CTCTAAACCCTATTGTTCCAAGACAACATACAGAACTTGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171389 48 - 1799296 CCAGTCAT-CTCTAAACCCTATTGTTCCAAGACAATATACAGAACTCGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754639 48 + 6934359 CCAGTCAC-CTCTAAACCCTATTGTTCCAAGACAACAAACAGAACTCGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108116931 47 - 128169293 CTCGCCAC-CTCTAAACCCTATTGTTCCAAGACAACAAACAGAAATGA- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734268 47 - 18371965 CTTGCCAC-CACTAAACCCTATTGTTCCAAGACAACAAACAGAAATGA- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1393720 47 + 3566421 CTTGCCAC-CTCTATACCCTCTTGTTCTAAGACGACAAACAGAAATGA- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1895604 47 - 9267652 CTTGCCAC-CACTAAACCCTATTGTTCCAAGACAACAAACAGAAATGA- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12758591 47 + 14340318 ATAGTC-C-TTCTAAATCCTACTGTTTGGGGACCACAAACAGCACTTTG i otoGar3.GL873564 C 0 I 1 s canFam3.chr18 51766624 42 - 55844845 ------ACACTCTAAACTCTACTGCTCCAAGACAACAAACAGCACTGA- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1201276 20 + 1446996 CCTAATAG-CTCTAAATCCAA---------------------------- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I a score=2261089.000000 s hg38.chrUn_KI270749v1 59008 226 + 158759 ATGTGTATCTTTCACCACTGGATTTGTGTTTGCTCCATAAAGC-----------TTCATGCTTAATAGGGTTGCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CCTTCTTCATATGGAATTATGGGTGATTTCCTTCA----------AT--------CTGCATAATAT-CAAGTTGAGGTT--CATGTTGATGAAAAGTAAAACAT-ACGTTTAAAA-TATCAGTAGTGATG-----TTTTCCCCTCCTT------------------ s panTro5.chr22 3545716 226 + 37823149 GTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGC-----------TTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTCTTTATTTTCCCATAAAATATCACAGG--CCTTCTTCATATGGAATTATGGATGATTTCCTTCA----------AT--------CTGCATCATAT-CAAGTTGAGGTT--CATGTTGATGGAAAGTAAAACAT-ACGTTTAAAA-TATCAGTAATGATG-----TTTTCCCCTCCTT------------------ i panTro5.chr22 N 0 C 0 s panPan2.chr7 108523964 219 - 162613886 GTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAA------------------GCTTAATAGGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CCTTCTTAATATGAAATTATAGGTGATTTCCTTTG----------AT--------CTGCATCATAT-CAAGTTGAGGTT--CATGTTTATGGAAAGTAAAACAT-ACGTTTAAAA-TATCAGTAATGATG-----TTTTCCCCTCCTT------------------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 38682 226 - 126596 GTGTGTATCTTTCACCACTGGATTTGTGTTTGCTCCATAAAGC-----------TTCATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CCTTCTTCATATGGAATTATGGGTGATTTCCTTCA----------AT--------CTGCATCATAT-CAAGTTGAGGTT--CATGTTGATGAAAAGTAAAACAT-ACGTTGAAAA-TATCAGTAAGGATG-----TTTTCCCCTCCCT------------------ i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55774764 219 + 99891981 GCGTGTATCTTTCACCACTGGATTTATCTTTGCTCCATAAA------------------GCTTAATAGGGTTTTTGTTAGTATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CTTCCTTAATATGGAATTATGGGTGATTTCCTCCA----------AT--------CTGCATCATAT-CAAGTTGAGGTT--CATGTTTACGGAAAGTAAAACAT-ACGTTTAAAA-TATCAGTAATGATG-----TTTTCCCCTCTTT------------------ i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133472947 223 - 185818997 GTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGC-----------TTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCA----------AT--------CTGCATCATAT-CAAGTTGAAATT-GCATGTTTATGGAAAGTAAAACAT-AGTTTTTAAA-TATCAGTAATGATG-----TTTTTCCCTCCTT------------------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302631 223 + 192294377 GTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGC-----------TTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCA----------AT--------CTGCATCATAT-CAAGTTGAAATT-GCATGTTTATGGAAAGTAAAACAT-AGTTTTTAAA-TATCAGTAATGATG-----TTTTTCCCTCCTT------------------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784491 223 + 3123512 GTGTGTATCTTTCACCACTGGATTTATCTTTGCTCCATAAAGC-----------TTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCA----------AT--------CTGCATCATAT-CAAGTTGAAATT-GCATGTTTATGGAAAGTAAAACAT-AGTTTTTAAA-TATCAGTAATGATG-----TTTTTCCCTCCTT------------------ i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505171 223 + 10077455 GTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGC-----------TTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCGTAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCA----------AT--------CTGCATCATAT-CAAGTTGAAATT-GCATGTTTATGGAAACTAAAACAT-AGTTTTTAAA-TATCAGTAATGATG-----TTTTTCCCTCCTT------------------ i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710851 223 + 127223203 GTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGC-----------TTAATGCTTAACAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCA----------AT--------CTGCATCATAT-CAAGTTGAAATT-GCATGTTTATGGAAAGTAAAACAT-AGTTTTTAAA-TATCAGTAATGATG-----TTTTTCCCTCCTT------------------ i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171437 223 - 1799296 GTGTGTATCTTTCACCACTGGATTTGTCTTCGCTCCATAAAGC-----------TTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCA----------AT--------CTGCATCTTAT-CAAGTTGAAATT-GCATGTTTATGGAAACTAAAACAT-AGTTTTAAAA-TATCAGTAATGATG-----TTTTTCCCTCCTT------------------ i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754687 227 + 6934359 GTGTGTTTCTTTCACCCCTGGATTTGTCTTTGCTCCATAAAGC-----------TTAATGCTTAATAAGGTTTCTGTTAGCATTTTCTCTATTTCTTTTCACATAAAATATCAGAGG--CCTTCTTAATATGGAATTATGGGCGATTTCCTTCA----------AT--------CTGCATCATAT-CAAGTTGAAACT-GCATGTTTATGGAAAGTAAAACAT-ACTTTTTAAA-TATCAGTAATGATG-----TTTTTCCCTCCTT------------------ i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108116978 222 - 128169293 GTGTTTATCTTTCAC--CTGAATTTGTCTTTGCTCCATAAAGC-----------TTAAGGCTTAATAGGTTTTCTGTTAGCATTTTC----TCTGTTTTCCCATAAAATAGCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCCTCA----------AT--------CTGCATCATATGAAAGTTGAAACT-GCATGCGTATGGAAAGTAAAACAT-ACATTTTAAA-TATAAGGAATTATG-----ATTTTCCCTTTAT------------------ i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 734315 226 - 18371965 GTGTTTATCTTTCAC--CCGGATTTGTCTTTGCTCCATAAAGC-----------TTAAGGCTTAATAGGGTTTCTGTTAGCATTTTCTCTATCTGTTTTCCCATAAAACATCACAGG--CCTTCTTAATATGGAATTATCGGTGAGTTCCCTCA----------AT--------CTGCATCATATGAAAGTTGAAATT-GCATGTGTATGGAAAGTAAAACAT-ACATTTTAAA-CATCAGGAATGATG-----ATTTTCCTTTTAT------------------ i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 1393767 225 + 3566421 GTGTTTATCTTTCAC--CTGGATTTGTCTTTGCTCCAT-AAGC-----------TTAAAGCTAATTAGGGTTTCTGTTAGCATTTTCTCTATCTGTTTTCCCATAAAATATCACAGG--CCTTCCTAATATGGAATTATGGGTGATTTCCCTCA----------AC--------CTGCATCATATGAAAGTTGAAATT-GCATGTGTATGGAAAGTAAAACAT-ACATTTTAAA-TATCAGGAATGATG-----ATTTTCCTTTTAT------------------ i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 1895651 226 - 9267652 GTATTTATCTTTCAC--CTGGATTTGTCTTTGCTCCATAAGGC-----------TTAAGGCTTAATAAGGTTTCTGTTAGCATTTTCTCTATCGGTTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCCTCA----------AT--------CTGCATCATATGAAAGTTGAAATT-GCATGTGTATAGAAAGTAAAACAT-ATATTTTAAA-TATCAGGAATGATG-----ATTTTCCTTTTAT------------------ i aotNan1.NW_018514471v1 C 0 I 1 s otoGar3.GL873564 12758639 205 + 14340318 GCGCACATGTTTCACCAGTGGTTTTGACTTTGCTTCCTTAAGC-----------TTGATGCTTAATGGGGTTTCTGTTAGTATTTTTTCTGCTTAGTTTCCCATAGAATATCAAATATTCCTTGTGATAATGGAA-TAT--------------------------------------CACCATAT-TAAGTTTAAATT-ACATGCTTACAGAATCAAAAACAT-AATTTTAGAATTATTAGTAATGATG-----TTCCTTATT---------------------- i otoGar3.GL873564 I 1 C 0 s canFam3.chr18 51766666 199 - 55844845 -------------------GCATTTGTCTTTGTGCCATTAAGC-----------TTAGTGTTT-----------------TTTTTTTTCCATTTAATTTCCCAT--AATATTTCAGT--TTTTCTAAGTGTGGAATCATGGGTAATTTTCTTCA----------ATTTCTTCACCTGCCCCATAT-CAATTTAAAACCCACATGCTTATAGAATGTGAAATATAACTTTCCTAA-TTTCAGTGATGATA-----CATTTCCCCCCAC------------------ i canFam3.chr18 C 0 I 1 s dasNov3.JH578441 1201296 250 + 1446996 ---------TTTCACCCTTGGATTTGTCTTAGCTCC----AGCCTTTGCTTCTGTTAATTCTTAA---GGTTTCTGTCAG-ATATTTTCTCTTTAATTTCTCACAAAACTTCACAT---TTTTCTTAGCATGGGAACATGGGTGATTTTCTTCATTCTGATCTCAT--------CTATTCCATAT-GCATTTGAAATC-ACATGTCCCTGATATGTGAAAAGT-ATATTTTCTA-T---AATTCTGGTGCCTCCTTTTACCTTTCTTGTGCATCCTTTCACCATT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66741815 1444 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I a score=62965.000000 s hg38.chrUn_KI270749v1 59234 4 + 158759 TTTA s panTro5.chr22 3545942 4 + 37823149 TTTA i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524183 4 - 162613886 TTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 38908 4 - 126596 TTTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66743259 4 - 72422247 TTTA i ponAbe2.chrUn I 1444 I 100 s nomLeu3.chr17 55774983 4 + 99891981 TTTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473170 4 - 185818997 TTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302854 4 + 192294377 TTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784714 4 + 3123512 TTTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505394 4 + 10077455 TTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711074 4 + 127223203 TTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171660 4 - 1799296 TTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754914 4 + 6934359 TTCA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117201 4 - 128169293 TTTA i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 734542 4 - 18371965 TTTA i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1393993 4 + 3566421 TTTA i cebCap1.NW_016107540v1 I 1 C 0 s aotNan1.NW_018514471v1 1895878 4 - 9267652 TTTA i aotNan1.NW_018514471v1 I 1 C 0 s otoGar3.GL873564 12758844 4 + 14340318 TTTA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51766866 4 - 55844845 TTTA i canFam3.chr18 I 1 C 0 s dasNov3.JH578441 1201546 4 + 1446996 TTCA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I a score=184340.000000 s hg38.chrUn_KI270749v1 59238 16 + 158759 GCACATGTGCTTGTGA s panTro5.chr22 3545946 16 + 37823149 GCACATGTGCTTGTGA i panTro5.chr22 C 0 I 4 s panPan2.chr7 108524187 16 - 162613886 GCACATGTGCTTGTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 38912 16 - 126596 GCACCTGTGCTTGTGA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55774987 16 + 99891981 GCACATGTGCTTGTGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473174 16 - 185818997 GCACATGTGCTTGTGA i rheMac8.chr3 C 0 I 4 s macFas5.chr3 67302858 16 + 192294377 GCACATGTGCTTGTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784718 16 + 3123512 GCACATGTGCTTGTGA i macNem1.NW_012011522v1 C 0 I 4 s cerAty1.NW_012000909v1 2505398 16 + 10077455 GCACATGTGCTTGTGA i cerAty1.NW_012000909v1 C 0 I 4 s chlSab2.chr21 5711078 16 + 127223203 TCACATGTGCTTGTGA i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012105809v1 1171664 16 - 1799296 GCACATGTGCTTGTGA i manLeu1.NW_012105809v1 C 0 I 4 s colAng1.NW_012115910v1 1754918 16 + 6934359 GCACATGTGCTTATGA i colAng1.NW_012115910v1 C 0 I 4 s calJac3.chr8 108117205 16 - 128169293 GCACGTGTGCTTGTGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734546 16 - 18371965 GCAGGTGTGCTTTTGA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1393997 16 + 3566421 GCATGTGTGCTTGTGA i cebCap1.NW_016107540v1 C 0 I 4 s aotNan1.NW_018514471v1 1895882 16 - 9267652 GCATGTGTGCTTTTAA i aotNan1.NW_018514471v1 C 0 I 4 s otoGar3.GL873564 12758848 16 + 14340318 GCATATGTGCTTGTGA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51766870 16 - 55844845 GTATGTGTACGGAGAG i canFam3.chr18 C 0 I 6 s dasNov3.JH578441 1201550 16 + 1446996 GTGTATGTGCAAGTAG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743263 100 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I a score=-13978.000000 s hg38.chrUn_KI270749v1 59254 8 + 158759 ----------TACAAGCA s panPan2.chr7 108524203 4 - 162613886 ----------GAAT---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 38928 8 - 126596 ----------TACAAGCA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775003 4 + 99891981 ----------GAGT---- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67302874 4 + 192294377 ----------GAGT---- i macFas5.chr3 C 0 C 0 s calJac3.chr8 108117221 4 - 128169293 ----------GAGT---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734562 4 - 18371965 ----------GAGT---- i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12758864 4 + 14340318 ----------GAGT---- i otoGar3.GL873564 C 0 I 17 s canFam3.chr18 51766892 2 - 55844845 ----------CA------ i canFam3.chr18 I 6 I 8 s dasNov3.JH578441 1201566 12 + 1446996 AGAAATTGTTTA------ i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743263 100 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1171680 4 - 1799296 I e macNem1.NW_012011522v1 2784734 4 + 3123512 I e rheMac8.chr3 133473190 4 - 185818997 I e aotNan1.NW_018514471v1 1895898 4 - 9267652 I e cebCap1.NW_016107540v1 1394013 4 + 3566421 I e colAng1.NW_012115910v1 1754934 4 + 6934359 I e chlSab2.chr21 5711094 4 + 127223203 I e cerAty1.NW_012000909v1 2505414 4 + 10077455 I e panTro5.chr22 3545962 4 + 37823149 I a score=856010.000000 s hg38.chrUn_KI270749v1 59262 76 + 158759 --------CATTT-----------TAATACAATTGTAGTCTCATGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAG s panTro5.chr22 3545966 76 + 37823149 --------CATTG-----------TAATACAATTCTAGTCTCATGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAG i panTro5.chr22 I 4 C 0 s panPan2.chr7 108524207 76 - 162613886 --------CATTG-----------TAATACAATTCTAGTCTCATGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCCGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 38936 75 - 126596 --------CATTT-----------TAATACAATTGTAGTCTCATGCTTTGATCATTCCTATGATGAAAATAACA-TTTTAGATAAAA-TATCTGAG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775007 76 + 99891981 --------CATTG-----------TAATACAATTCTAGTCTCATGCTTCGATCATTCCTAAGATGAAAATGACATGTTTAGATAAAA-TATCTGAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473194 76 - 185818997 --------CATTG-----------TAACACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAG i rheMac8.chr3 I 4 C 0 s macFas5.chr3 67302878 76 + 192294377 --------CATTG-----------TAACACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784738 76 + 3123512 --------CATTG-----------TAACACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAG i macNem1.NW_012011522v1 I 4 C 0 s cerAty1.NW_012000909v1 2505418 76 + 10077455 --------CATTG-----------TAATACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTAAGATAAAA-TATCTGAG i cerAty1.NW_012000909v1 I 4 C 0 s chlSab2.chr21 5711098 72 + 127223203 --------CGTTG-----------TAATACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATC---- i chlSab2.chr21 I 4 C 0 s manLeu1.NW_012105809v1 1171684 76 - 1799296 --------CATTG-----------TAATACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAG i manLeu1.NW_012105809v1 I 4 C 0 s colAng1.NW_012115910v1 1754938 76 + 6934359 --------CATTG-----------TAATACAATTCTAGTCTCACGCTTTGATCATCCCTAAGATGAAAATAACATTTTTAGATAAAA-TATCTGAG i colAng1.NW_012115910v1 I 4 C 0 s calJac3.chr8 108117225 73 - 128169293 --------CATTG-----------TAATACAATTTTAGTCTCATGCTTTGATCATTCCTAAGATGAAA---ATATTTTTAGATAAAA-TATCTGAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734566 75 - 18371965 --------CATTG-----------TAATACAATTTTA-TCTCTTGCTTTGATCATTCCTAAGATGAAAATTATATTTTTAGATAAAA-TATCTGAG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394017 73 + 3566421 --------CATTG-----------TAATACAATTTTAGTCTCATGCTTTGATCATTCCTGAGATGAAA---ATATTTTTAGATAAAA-TATCTGAG i cebCap1.NW_016107540v1 I 4 C 0 s aotNan1.NW_018514471v1 1895902 73 - 9267652 --------CATTG-----------TAATACAATTTTAGTCTCATGCTTTGATCATTCCTAAGATGAAA---ATATTTTTAGATAAAA-TATCTGAG i aotNan1.NW_018514471v1 I 4 C 0 s otoGar3.GL873564 12758885 88 + 14340318 --------CACTGGGAAACAGAGATAATGTAATTCTTGTCTCATATTTTGATCTTTCCCAAGATGAAAAGAATATTTTTAGTTAAAAGTACCTAAA i otoGar3.GL873564 I 17 I 1 s canFam3.chr18 51766902 82 - 55844845 --------CAATGAGGGAAAGATATAATATGATTCTATTCTCATAATTTGGTCTTTCCCCAAATAA-----ATAATTTTTGTTAAAA-TATTTGAG i canFam3.chr18 I 8 C 0 s dasNov3.JH578441 1201578 91 + 1446996 TATTTATGCAATG-GGGAAGGAGATAATGCAATTCTATTTTCACAGTTTGATCTTTTC-AAGATTAAAA--GGATTTTTATTTAAAA-TGTTGGAG i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743263 100 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I a score=5733.000000 s hg38.chrUn_KI270749v1 59338 1 + 158759 T s panTro5.chr22 3546042 1 + 37823149 T i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524283 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39011 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66743363 1 - 72422247 T i ponAbe2.chrUn I 100 I 385 s nomLeu3.chr17 55775083 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473270 1 - 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302954 1 + 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784814 1 + 3123512 C i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505494 1 + 10077455 C i cerAty1.NW_012000909v1 C 0 C 0 s manLeu1.NW_012105809v1 1171760 1 - 1799296 C i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755014 1 + 6934359 C i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117298 1 - 128169293 C i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734641 1 - 18371965 C i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394090 1 + 3566421 C i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1895975 1 - 9267652 C i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51766984 1 - 55844845 C i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1201669 1 + 1446996 C i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12758973 1 + 14340318 I e chlSab2.chr21 5711170 0 + 127223203 C a score=2668309.000000 s hg38.chrUn_KI270749v1 59339 245 + 158759 CTTATGAGGCCTTTAGTATGTGATGTGATAGAACATCAGAAGACCATACTTT--------TTTC--------TAGTTTTCCGTGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAG----T---------A-ATTTTCCAAAATAGGTATCTTGTCATTCTTCCTGTTGTTATCAGTAAA----TAAGTGAAATGAAAAGCTAGATTATATA-ATTTACCTAGAACAAGAAAGTAGAATTGAATCTACATTCAT--TAATGAGACTAACCAGTCAAT s panTro5.chr22 3546043 239 + 37823149 TTTATGAGGCCTTTAGTATATGATGT-----AATATCAGAAGACCATA-TTT--------TTTC--------TAGTTTTCCATGCAATTCTATCATTGTTTCACCTTTACTCCTACGAAAG----T---------A-ATTTTCCAAAACAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAA----TAAGTGAAACGAAAAGCTAGATTATGTA-ATTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCAT--TAATGAGACTAACCAGTCAAT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524284 245 - 162613886 TTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGACCATATTTT--------TCTC--------TAGTTTTCCGTGCAATTCTATCATTGTTTCTTCTTTACTCCTACCGGAG----T---------A-GTTTTCCAAAATAGATATCTTGTCATTCTTCCTGTTGTTACCAGTAAA----TAAGTGAAATGAAAAGCTAGATTATATA-TTTTTTCTAGAAGAAGAAAGTAGAATTGAATCTCTATTCAC--TAATGAGACTAACCAGTCAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39012 243 - 126596 TTTATGAGGCCTTTAGTATGTGATGTGATAGAATATCAGAAGACCATACTTT--------TTTC--------TAGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAG----T---------A-ATTTTCCAAAATAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAA----TAAGTGAAATGAAAAGCTAGATTATATA-ATTTATCTAGAACAAG-AAGTAGAATTGAATCT-TATTCAT--TAATGAGACTAACCAGTCAAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775084 235 + 99891981 TTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGACCATATTTT--------TCTC--------TAGTTTTCCGTGCAATTCTATAATCGTTTCATCTTTACTCCTACCAGAG----T---------A-ATTTTCCAAAATAGATATCTTGTCATTCTTC----------CAGTAAA----TAAGTGAAACAAAAAGCTAGATTATATA-TTTTATCTAGAAGAAGAAAGTAGAATTGAATCTCTATTCAT--TAATGAGACGAAACAGTCAAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473271 241 - 185818997 TTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTT--------TCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAG----T---------A-ATTTTCCAAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAA----TAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACAT--TAATGAGACTAACCAGTCAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302955 241 + 192294377 TTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTT--------TCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAG----T---------A-ATTTTCCAAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAA----TAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACAT--TAATGAGACTAACCAGTCAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784815 241 + 3123512 TTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTT--------TCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAG----T---------A-ATTTTCCAAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAA----TAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACAT--TAATGAGACTAACCAGTCAAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505495 241 + 10077455 TTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTT--------TCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCTTACCAGAG----T---------A-ATTTTCCAAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAA----TAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACAT--TAATGAGACTAACCAGTCAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711170 240 + 127223203 ----TGAAGCCTTTAGGAGATGATGTGATAGAATATCAGAAGACCATATTTT--------TCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAG----T---------A-ATTTTCCAAAATAGGTATCTTGTCATTCTTCCTGTTGTTATCAGTGAA----AAAGTGAAATGAAAATCTAGATTATATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCAT--TAATGAGACTAACCAGTCAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171761 241 - 1799296 TTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTT--------TCTC---------AGTTTTCCATGCAACTCTATCATTGTTTCATCTTTACTCCTACCAGAG----T---------A-ATTTTCCAAAATAGGTATCTTGTCGTTCT---TGTTGTTATCAGTGAA----TAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGGATTGAATCTATATTCAT--TAATGAAACTAACCAGTCAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755015 244 + 6934359 TTTATGAAGCATTTAGGATGTGATGTGATAGAATATCAGAAGACCATATTTT--------TCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTATACTCCTACCAGAG----T---------A-ATTTTCCAAAATAGATATCTTGTCATTCTTCCTGTTATTATCAGTGAA----TAAGTGAAATGGAAAGCTAGATTATATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCTT--TAATGAGACTAACTAGTCAAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117299 246 - 128169293 TTTATGAAGCCAATAGGATATCTTGTGATAGGCTATCATAAGACCATATTTT--------TCTC--------TAGTTTTGTATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAG----T---------A-AATTTCCAAAATAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAA----GAAGTGATATGAAAAGCTAGATTATATATTTTTATGCAGAGCAAGAAAGTAGAATTGAATCTATATTCTT--TAATAAGACTAATCAGTCAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734642 246 - 18371965 TTTATGAAGCCAATAGGATGTCTTGTGATAGAGTATCATAAGACCATATTTT--------TCTC--------TAGTTTTGCATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAG----T---------A-AATTTCCAAAATAGATATCTTGTTATTCTTTCTGTTGTTATCAGTAAA----TAAGTGATATGAAAAGCTAGATTATATATTTTTATCTAGAGCAAGAAAATAGAATCGAATCTATATTCTT--GAATAAGACTAACCAGTCAAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394091 246 + 3566421 TTTATGAAGCCAATAGGATATCTTGTGATAGAATATCATAAGACCATATTTT--------TCTC--------TAGTTTTGCATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAG----T---------A-AATTTCCAAAATAGATATCTTGTCATTCTTCCTGTTGTTATCCGTAAA----TAAGTGATATGAAAAGCTAGATTATATATTTTTATCTAGAGCAAGAAAGAAGAATTGAATCTATGTCCTT--GAATAAGACTAACCAGTCAGT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1895976 243 - 9267652 TTTATGAAGCCAATAGGATATCTTGTGATAGAATATCATAAGACCATATTTT--------TCTC--------TAGTTTTGCATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAG----T---------A-AATTTCCAAAATAGATATCTTGTCATTCTTCC---TGTTATCAGTAAA----TAAGTGATATGAAAAGCTAGATGATATATTTTTATCTAGAGCAAGAAAGTAGAATTGAATCTATATTCTT--TAACAAGACTAACCAGTCAAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12758974 234 + 14340318 TTAATGAAACTGTTAGGATATGATGAGATAGAGTATTATAAGACCATAATTT--------TCTC---------CATTTTACACATAATGCTATCATTGTTCCATTCTT-------TCAGAT----T---------ATTTTTTCTAAAATGGATATCTTATCATTCTTTCTGTTATTATCAGTAAA----TAAGTGA-ATGAAAAACTAGATTATATGTTTTCATATGAGACAAGAAAGTAGAATCAATTGTACATCCTT--TCATAA----AACAAGTCAGT i otoGar3.GL873564 I 1 C 0 s canFam3.chr18 51766985 257 - 55844845 TTAATGAAACTTTTAAGATGAGATGTGATAGACTATTGTTTGGCCATATTCT--------TCACTTATTTTATAGTTTTGCCCATAATTCTATCATTGCTCCCTCCTTAACTTTTCCAAAATCTTT---------G-TTTTTCCAAAATCTATATTTTGCCATTTTCCCTGTCATTATTTGTAAATGAGTAAGTGAAATGAAAAAC-AGAGTGTATATCTGTATTTGGGACAAAAAGGTAGAATAAAATCTATATTATC--TAATAA----ATTCAGTCAAT i canFam3.chr18 C 0 I 2 s dasNov3.JH578441 1201670 263 + 1446996 CTAAAGAAATATTTAAGACATGATGTGATACAGTATTAGACTATCATATCCTGCAACTCATATC--------TAGTTTTTCACATAATTCCACCATCATTACATCCTCACTACTAATAGAG----TTACAGAGTAA-GTTTTCCAAA------ATCTTATCACTTTTCCTGTCATTAACATTAAATGGGTAAGTTAAGTGAAAAATTAGGATATATGTCTTCAGCTGGGACAATAAAATATAATTTAATCCATACCCCTACTAATGAAGCTAACCAGTCAGT i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743364 385 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I a score=24361.000000 s hg38.chrUn_KI270749v1 59584 2 + 158759 TA s panTro5.chr22 3546282 2 + 37823149 TA i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524529 2 - 162613886 TA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39255 2 - 126596 TA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775319 2 + 99891981 TA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473512 2 - 185818997 TA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303196 2 + 192294377 TA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785056 2 + 3123512 TA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505736 2 + 10077455 TA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711410 2 + 127223203 TA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172002 2 - 1799296 TA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755259 2 + 6934359 TA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117545 2 - 128169293 TA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734888 2 - 18371965 TA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394337 2 + 3566421 TA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896219 2 - 9267652 TA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12759208 2 + 14340318 TA i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1201933 2 + 1446996 GA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743364 385 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e canFam3.chr18 51767242 2 - 55844845 I a score=472117.000000 s hg38.chrUn_KI270749v1 59586 46 + 158759 CACAGATAGGCATTTTACATTTTGAAGATCATATGG-ACCCATTGTC s panTro5.chr22 3546284 46 + 37823149 CACGTATAGGCATTTTACATTTTGAAGATCACATGG-ATCCATTGTC i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524531 46 - 162613886 CACAGATAGGCATTTTACATTTTGAAGATCATATGG-ACCCATTGTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39257 44 - 126596 CACAGATA-GCATTTTACATTTTGAAGATCATATGG-A-CCATTGTC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775321 46 + 99891981 CACAGATAGGCATTTTACATTTTGAAGATCATATGG-ACCCATTGTC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473514 46 - 185818997 CACAGATAGGCATTTTACATTTTGCAGATCATATGG-ACCCGTTGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303198 46 + 192294377 CACAGATAGGCATTTTACATTTTGCAGATCATATGG-ACCCGTTGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785058 46 + 3123512 CACAGATAGGCATTTTACATTTTGCAGATCATATGG-ACCCGTTGCC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505738 46 + 10077455 CACAGATAGGCATTTTACATTTTGAAGATCATATGG-ATCCATTGCC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711412 46 + 127223203 CACAGATAGGCATTTTACATTTTGAAGATCATATGG-ATCCATTGCC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172004 46 - 1799296 CACAGATAGGCATTTTACATTTTGAAGATCATATGG-ATCCATTGCC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755261 46 + 6934359 CACAGATAGACATTTTACATTTTGAAGATCATATGG-ACCCATTGCC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117547 42 - 128169293 CAC----AGTCATTTTACATTTTGAAGATTATATCG-GCCCATTGTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734890 46 - 18371965 CACATATAGTTATTTTACATTTTGAAGATTATATCG-ACCCATTGTC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394339 46 + 3566421 CACATATAGTCATTTTACATTTTGAAGATTATGTCG-ACCCATTGTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896221 46 - 9267652 CACATATAGTCATTTTACATTTTGAAAATTATATCG-ACCCATTGTC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12759210 43 + 14340318 CAC----AGCCATTATACATTTTAAAGATAATATGGCATCCACTGTC i otoGar3.GL873564 C 0 I 58 s canFam3.chr18 51767244 35 - 55844845 CATAGATAATTATTGTATATTTTAAGGATAGTGTC------------ i canFam3.chr18 I 2 C 0 s dasNov3.JH578441 1201935 43 + 1446996 CACAAATA---TTTGTACAACTTGAAGGTAATGTAG-GTCCACTGTC i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743364 385 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I a score=497281.000000 s hg38.chrUn_KI270749v1 59632 60 + 158759 ---AGAAATATTATTATTTATGTCTATATGGACATCACCTGTGCATATTTACATAGAAATCAA s panTro5.chr22 3546330 60 + 37823149 ---AGACATATTATTATTTATGCCTATATGGACATCACTGGTGCATATTTATGTAGAAATCAA i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524577 60 - 162613886 ---AGATATATTATTATTTGTATCTATATAGACATAACCTATGCATATTTATGTAGAAATCAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39301 59 - 126596 ---AGAAATATTATTATTTATGTCTATATGGACATCAC-TGTGCATATTTACATAGAAATCAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775367 60 + 99891981 ---AGATATATTATTATTTATATCTGTATGGACATCACCCGTGCATATTTATGTAGAAATCAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473560 60 - 185818997 ---AGATACATTACTATTTATACCTACATTGACCTCACCTGTGCATATTTGTGCAAAAATCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303244 60 + 192294377 ---AGATACATTACTATTTATACCTACATTGACCTCACCTGTGCATATTTATGCAAAAATCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785104 60 + 3123512 ---AGATACATTACTATTAATACCTACATTGACCTCACCTGTGCATATTTATGCAAAAATCAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505784 60 + 10077455 ---AGATACATTACTATTTATACCTACATTGACCTCACCGGTGCATATTTATGCAAAAATCAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711458 60 + 127223203 ---AGATACATTACTATTTACACCTACATTGACCTAACCGGTGAATATTTATGCAAAAGTCAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172050 60 - 1799296 ---AGATACATTACTATTCATACCTACATTGACCTCACCGGTGCATATTTATGCAAAAATCAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755307 60 + 6934359 ---AGATACATTACTATTTATATCTACATTGATCTCACCTGTGCATATTTATGCAAAAATCAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117589 55 - 128169293 ---AGA-----TATTATGTATTTCTATATGGACATGGCCTGTGCATATTTATGTAGAAATTAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734936 55 - 18371965 ---AAA-----TATTATGTATATCTATATGGACATGGCCTGTGCATATTTATGTAGAAATCAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394385 55 + 3566421 ---AGA-----TATTACGTATATCTATATGGACTTGGCCTGTGCATATTTATGTAGAAATCAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896267 55 - 9267652 ---AGA-----TATTATGTGTTTCTATATAGACATGGCCTGTGCCTATTTATGTAGAAATCAA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51767279 60 - 55844845 ---AGAAAAATGGTCGCTTCTATCTATATAAACATTACCTATATTCATCTATGTAGAAATCAA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1201978 58 + 1446996 TGGAGA---ATTGTCATTTCTAGCCATCTGGACATCA--AGTCTATGTCTATGCAAAAATTAA i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743364 385 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12759253 58 + 14340318 I a score=266274.000000 s hg38.chrUn_KI270749v1 59692 29 + 158759 TGAGAGCTGATTTTTGTTTCTATGATATA s panTro5.chr22 3546390 29 + 37823149 TGAGAGCTGAtttttatttttattttata i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524637 29 - 162613886 TGAGAGCAGACTTTTATTTTTATTATATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39360 29 - 126596 TGAGAGCTGATTTTTATTTTTATTATATA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775427 29 + 99891981 TGAGAGCAGACTTTTATTTTTATTATATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473620 29 - 185818997 TGAGAGTTGATTTTTATTTTTATTGTATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303304 29 + 192294377 TGAGAGTTGATTTTTATTTTTATTGTATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785164 29 + 3123512 TGAGAGTTGATTTTTATTTTTATTGTATG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505844 29 + 10077455 TGAGAGCTGATTTTTATTTTTATTATATG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711518 29 + 127223203 TGAGAGCTGATTTTTATTTTTATTGTATG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172110 29 - 1799296 TGAGAGATGAtttttatttttattatatg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755367 29 + 6934359 TGAGAGCTGATTTTTATTTTTATTATATG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117644 29 - 128169293 TGAGAGCTGATTTTTATTTCAATTATGTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734991 29 - 18371965 TGACAGCTGATTTTTATTTTAATTTTATG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394440 29 + 3566421 TGAGAGCTGATTTTTATTTTAATTATATG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896322 29 - 9267652 TGAGAGCTGATTTTTATTTTAATTATATG i aotNan1.NW_018514471v1 C 0 C 0 s dasNov3.JH578441 1202036 23 + 1446996 ------AAGTTTTTTTTTTCCTTCAAATA i dasNov3.JH578441 C 0 I 1417 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743364 385 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12759253 58 + 14340318 I e canFam3.chr18 51767339 0 - 55844845 C a score=20010.000000 s hg38.chrUn_KI270749v1 59721 2 + 158759 TA s panTro5.chr22 3546419 2 + 37823149 ta i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524666 2 - 162613886 TA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39389 2 - 126596 TA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775456 2 + 99891981 TA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473649 2 - 185818997 TA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303333 2 + 192294377 TA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785193 2 + 3123512 TA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505873 2 + 10077455 TA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711547 2 + 127223203 TA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172139 2 - 1799296 ta i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755396 2 + 6934359 TA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117673 2 - 128169293 TA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735020 2 - 18371965 CA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394469 2 + 3566421 TA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896351 2 - 9267652 TA i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743364 385 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12759253 58 + 14340318 I e canFam3.chr18 51767339 0 - 55844845 C e dasNov3.JH578441 1202059 1417 + 1446996 I a score=10920.000000 s hg38.chrUn_KI270749v1 59723 1 + 158759 t s panTro5.chr22 3546421 1 + 37823149 t i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524668 1 - 162613886 t i panPan2.chr7 C 0 C 0 s ponAbe2.chrUn 66743749 1 - 72422247 t i ponAbe2.chrUn I 385 I 157 s nomLeu3.chr17 55775458 1 + 99891981 t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473651 1 - 185818997 t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303335 1 + 192294377 t i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785195 1 + 3123512 t i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505875 1 + 10077455 t i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711549 1 + 127223203 t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172141 1 - 1799296 t i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755398 1 + 6934359 t i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117675 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735022 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394471 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896353 1 - 9267652 T i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e gorGor5.CYUI01000522v1 39391 0 - 126596 C e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12759253 58 + 14340318 I e canFam3.chr18 51767339 0 - 55844845 C e dasNov3.JH578441 1202059 1417 + 1446996 I a score=1001061.000000 s hg38.chrUn_KI270749v1 59724 125 + 158759 tttttgagatagggtcttgctttggtgcccaggatggagtgcagtggtgcaatcactgctcattgcagcctcagcctcccaagctcaagcaatccttccaccttggcctcacaaatagctaggac s panTro5.chr22 3546422 125 + 37823149 tttttgagatagggtcttgctttgttgcccaggctggagtgcagtggtgcaatcactgctcattgaggcctcaacctcccaagctcaagcaatccttccaccttggcctcccaaatagctaggac i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524669 125 - 162613886 tttttgagatagggtcttgctttgtggcccaggctggagtgcagtggtgcaatcactgctcgctgcaggctcaacctcccaagctcaagcaatccttccaccttggcctctcaaatagctaggac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39391 125 - 126596 tttttgagatagggtcttgctttgttgcccaggctggagtgcagtggtgcaatcactgctcactgcagcctcagcctcccaagctcaagcaatccttccaccttggcctcccaaatacctaggac i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775459 125 + 99891981 tttttgagatagggatttgctttgtggcccaggctggagtgcagtggtgcaatcactgctcactgcagcctcaacctcccaagctcaagcaatccttccaccttggcctctcaaatagctaggac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473652 125 - 185818997 tttttgagttagagtcttgctttggtgcccaggctggagtacagtggtgcaatcactgctcactgcagcctcaaccccccaagctcaagcaatccttccacctcagcctcccaaatagctagaac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303336 125 + 192294377 tttttgagttagagtcttgctttggtgcccaggctggagtacagtggtgcaatcactgctcactgcagcctcaaccccccaagctcaagcaatccttccacctcggcctcccaaatagctagaac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785196 125 + 3123512 tttttgagttagagtcttgctttggtgcccaggctggagtacagtggtgcaatcactgctcactgcagcctcaaccccccaagctcaagcaatccttccacctcggcctcccaaatagctagaac i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505876 119 + 10077455 tttttgagttagagtcttgctttggtgcccaggctggaatacagtggtgcaatcactcc------caagctcaacctcccaagctcaagcaatccttccaccttggcctcccaaatatctaggac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711550 125 + 127223203 tttttgagttaggttcttgctttggtgcccaggctggaatacagtggtgcaatcactgctcactgcagcctcaacctcccaagctcaagcaatccttccaccttagtcttccaaatagctaggac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172142 119 - 1799296 tttttgagttagggtcttgctttgatgcccaggctggaatacagtggtgcaatcactcc------caagctcaacctcccaagctcaagcaacccttccaccttggcctcccaaatacctaggac i manLeu1.NW_012105809v1 C 0 I 6435 s colAng1.NW_012115910v1 1755399 125 + 6934359 tttttgagttagggtcttgctttggtgcccaggttggaatatcgtggtacgatcactgctcactgcagccacaacctccaaagctcaagcaatccttccaccttggcctcccaaatagctagaac i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117676 100 - 128169293 TTCTTGGGATAGGGTCTTGCTTTATTGC-------------------------cactgttcactgcgacctcgacctttcaagctgaagcaatccttccacctcagcctcccaagtagctagtac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735023 100 - 18371965 TTTGGGAGATAGGGTCTTGCTTTATTGC-------------------------cactgctcactgcagcctcaaccttccaagctgaagcaatccttccacctcagcctcccaaatagctagtac i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394472 100 + 3566421 TTTTTGGGATAGGGTCTTGCTTTATTGC-------------------------CACTgctcactgcagcctcaactttccaagctgaagcaatccttccacctcaccctcccaaatagctagtac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896354 100 - 9267652 TTTTTGGGATAAGGTCTTGCTTTATTGC-------------------------CACTgctcgctgcagcctcaaccttccaagctgaagcaatccttccacctcagcctcccaaatagctagtac i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743750 157 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12759253 58 + 14340318 I e canFam3.chr18 51767339 0 - 55844845 C e dasNov3.JH578441 1202059 1417 + 1446996 I a score=194651.000000 s hg38.chrUn_KI270749v1 59849 25 + 158759 aacaggtgcacatcaccatgcccac s panTro5.chr22 3546547 25 + 37823149 aaaaggtgcacatcaccatgcccac i panTro5.chr22 C 0 I 2 s panPan2.chr7 108524794 25 - 162613886 aacaggtgcacaccatcatgcctac i panPan2.chr7 C 0 I 2 s gorGor5.CYUI01000522v1 39516 25 - 126596 aacaggtgcacatcaccatgcccac i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775584 25 + 99891981 aacaggtgcacaccaccatgcccac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473777 25 - 185818997 aacaggtgcacaccatcatgcccag i rheMac8.chr3 C 0 I 4 s macFas5.chr3 67303461 25 + 192294377 aacaggtgcacaccatcatgcccag i macFas5.chr3 C 0 I 3 s macNem1.NW_012011522v1 2785321 25 + 3123512 aacaggtgcacaccatcatgcccag i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 2505995 25 + 10077455 gacaggtgcacaccaccatgcccag i cerAty1.NW_012000909v1 C 0 I 7 s chlSab2.chr21 5711675 25 + 127223203 cataggtgcacacaaccatgcctag i chlSab2.chr21 C 0 I 12 s colAng1.NW_012115910v1 1755524 25 + 6934359 aacaggtgcacgccaccatgcccag i colAng1.NW_012115910v1 C 0 I 7 s calJac3.chr8 108117776 25 - 128169293 aacaggtgtgcaccaccatgcccag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735123 25 - 18371965 tacaggtgtgcaccaccatgcccag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394572 25 + 3566421 aacaggtgtgcagcaccctgcccag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896454 25 - 9267652 aacaggtgtgcaccaccatgcccag i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743750 157 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12759253 58 + 14340318 I e manLeu1.NW_012105809v1 1172261 6435 - 1799296 I e canFam3.chr18 51767339 0 - 55844845 C e dasNov3.JH578441 1202059 1417 + 1446996 I a score=6086.000000 s hg38.chrUn_KI270749v1 59874 1 + 158759 t s panTro5.chr22 3546574 1 + 37823149 t i panTro5.chr22 I 2 C 0 s panPan2.chr7 108524821 1 - 162613886 t i panPan2.chr7 I 2 C 0 s gorGor5.CYUI01000522v1 39541 1 - 126596 t i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66743907 1 - 72422247 t i ponAbe2.chrUn I 157 I 974 s nomLeu3.chr17 55775609 1 + 99891981 c i nomLeu3.chr17 C 0 I 3 s rheMac8.chr3 133473806 1 - 185818997 t i rheMac8.chr3 I 4 C 0 s macFas5.chr3 67303489 1 + 192294377 t i macFas5.chr3 I 3 C 0 s macNem1.NW_012011522v1 2785348 1 + 3123512 t i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 2506027 1 + 10077455 t i cerAty1.NW_012000909v1 I 7 C 0 s chlSab2.chr21 5711712 1 + 127223203 t i chlSab2.chr21 I 12 C 0 s manLeu1.NW_012105809v1 1178696 1 - 1799296 t i manLeu1.NW_012105809v1 I 6435 C 0 s colAng1.NW_012115910v1 1755556 1 + 6934359 t i colAng1.NW_012115910v1 I 7 C 0 s calJac3.chr8 108117801 1 - 128169293 c i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735148 1 - 18371965 c i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394597 1 + 3566421 c i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896479 1 - 9267652 t i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12759253 58 + 14340318 I e canFam3.chr18 51767339 0 - 55844845 C e dasNov3.JH578441 1202059 1417 + 1446996 I a score=1309606.000000 s hg38.chrUn_KI270749v1 59875 135 + 158759 ttt-----tttttt--taacttttgatagagactgggtcttgctatgttgcccaggtttcttttgaactcctgggctcaaagaatcctctcatttcagcctcttcaactgctggtattataagcatgaatcaccATATGGGC s panTro5.chr22 3546575 132 + 37823149 ttt-----tttttt--taacttttgatagagactgggtcttgctatgttgcccaggttgcttttgaactcctgggctcatagaatccgctcatttcag---cttcaactgctggtattacaagcatgagccaccATATGGGC i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524822 135 - 162613886 ttt-----tttttt--taacttttggtagagactgggtcttgctatgttgctcaggttgttcttgaactcctgggctcaaagaatcctctcatttcagcctcttaaactgctggtattacaggcatgagccaccATATGGGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39542 135 - 126596 ttt-----tttttt--taacttttgatagagactgggtcttgctatgttgcccaggtttcttgtgaactcctgggctcaaggaatcctctcatttcagcctcttcaactgctggtattacaagcatgaaccaccATATGGGC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775613 137 + 99891981 ttc-----ttttttaataacttttggtagagactgggtcttgctatgttgcccaggttgctcttgaactcctgggctcaaagaatcctctcatttcagcctcttaaactgctggtattacaggcatgagccaccATATGGGC i nomLeu3.chr17 I 3 C 0 s rheMac8.chr3 133473807 135 - 185818997 ttt-----tttttt--taacttttggtagagactggatcttgctatactgcccaggttgcttttgaagtcctgggctcaaagaatcctctcatttcagtctcttaaaatgctggtatgacaggcatgagccaccATATGGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303490 135 + 192294377 ttt-----tttttt--taacttttggtagagactggatcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatttcagtctcttaaaatgctggtattacaggcatgagccaccATATGGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785349 135 + 3123512 ttt-----tttttt--taacttttggtagagactggatcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatttcagtctcttaaaatgctggtattacaggcatgagtcaccATATGGGC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506028 135 + 10077455 ttt-----tttttt--taacttttggtagagactggatcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatttcagtctcttaaaatgctggtattacaggcatgagccaccATATGGGC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711713 135 + 127223203 ttt-----tttttt--taacttttggtagagactggatcttgctatactgcccaggttgctcttgaagccctgggctcaaagaatcctctcatttcaatctcttaaaatgctggtattagaggcatgagccaccATATGGGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1178697 135 - 1799296 ttt-----tttttt--taacttttggtagagactggatcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatttcagtctcttaaagtgctggtattacaggcatgagccaccATATGGGC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755557 135 + 6934359 ttt-----tttttt--taacttttggtagagactagatcttgctatattgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatttcaatctcttaaaatgctggtattacaggcatgagccaccATATGGGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117802 134 - 128169293 -ta-----tttttc--taacttctggtacagactgggtcttgctatgttgtccaggttgctcttgaactcctgggctcaaagaatcctcttatttcagcctcttaaaatactggtattacagacataagccaccATATGGGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735149 134 - 18371965 -ta-----tttttt--taacttttggtacaaactgggtcttgctatgttgtccaggtggctcttgaactcctgggctcaatgaatcctctcatttcaccctcttaaaatgctggtattacagacatgagccaccATATGGGC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394598 139 + 3566421 -tattttttttttt--taacttttggtacagactgggtcttgctatgttgtccaggttgctcttgaactcctgggctcaaagaatcctctcatttcagcctcttaaaatgctgatattacagacatgagtcaccATATGGGC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896480 134 - 9267652 -ta-----tttttt--taacttttggtacagactgggtcttgctatgttgtctaggttgctcttgaactcctgggctcaaagaatcctctcatttcagcctcttaaaatgctgatattacaaacatgagccaTTATATGGGC i aotNan1.NW_018514471v1 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743908 974 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12759253 58 + 14340318 I e canFam3.chr18 51767339 0 - 55844845 C e dasNov3.JH578441 1202059 1417 + 1446996 I a score=12376.000000 s hg38.chrUn_KI270749v1 60010 1 + 158759 T s panTro5.chr22 3546707 1 + 37823149 T i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524957 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39677 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775750 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473942 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303625 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785484 1 + 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506163 1 + 10077455 T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711848 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1178832 1 - 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755692 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117936 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735283 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394737 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896614 1 - 9267652 T i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51767339 1 - 55844845 T i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743908 974 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12759253 58 + 14340318 I e dasNov3.JH578441 1202059 1417 + 1446996 I a score=2142016.000000 s hg38.chrUn_KI270749v1 60011 207 + 158759 GGAAGCTGATTTTTAAAATACTGAGATCATATAGATGACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAAGTGT--GAGGGTATCAAT-ATTGTTGTGGCTA-----------TT----GGGGAGGAAAA----CATTAGTAAAACCAGTAAGTTAAAGCTCTTGCTTTA--AACTT----------TGGCTTTA---ATTTAGCAAATGTTCTATGGAGTGACAGTATGTATG s panTro5.chr22 3546708 207 + 37823149 GGAAGCTGGTTTTTAAAATACTGAGATCATATAGATAACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTGAAAAGGTGT--GAGGGTATCAAT-ATTGTTGTGGCTA-----------TT----GGGGAGGAAAA----CATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTTA--AACTT----------TGGCTTTA---ATTTAACAAATGTTCTCTGGGGTGACAGTATGTATG i panTro5.chr22 C 0 C 0 s panPan2.chr7 108524958 207 - 162613886 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGTACCTGAAAAATAGACAACACCAAGCTTTACGTTAAAAGGTGT--GGGGATATCAAT-ATTGTTGTGGCTA-----------TT----GGGGAGGAAAA----AATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTTA--AACTT----------TGGCTTTA---ATTTAACAAATGTTCTCTGGGGTGACAGTATATATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39678 207 - 126596 GGAAGCTGATTTTTAAAATACTGAGATCATATAGATGACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTGT--GAGGGTATCAAT-ATTGTTGTGGCTA-----------TT----GGGGAGGAAAA----CATTAGTAAAACCAGTAAGTTAAAGCTCTTGCTTTA--AACTT----------TGGCTTTA---ATTTAACAAATGTTCTATGGAGTGACAGTATGTATG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775751 207 + 99891981 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTGT--AGGGGTATCAAT-ATTGTTGTGGCTA-----------TT----GGGGAGGAAAA----AATTAGTAAAACCAGTGAGTTAAAGCTGTTGTTTTA--AACTT----------TGGCTTTA---ATTTAACAAATGTTCTCTGGGGTGACAGTATATATG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133473943 206 - 185818997 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGTTATGGCTA-----------TT----GTGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------TGGTTTTA---ATTTAACAAATGTTTTCTGGGGTGACAGTATATATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303626 206 + 192294377 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGTTATGGCTA-----------TT----GTGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------TGGTTTTA---ATTTAACAAATGTTTTCTGGGGTGACAGTATATATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785485 206 + 3123512 GGAAGCTGATTTTTAAAATATTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGTTATGGCTA-----------TT----GTGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------TGGTTTTA---ATTTAACAAATGTTTTCTGGGGTGACAGTATATATG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506164 204 + 10077455 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGT--TGGCTA-----------TT----GAGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--aactt----------tggcttta---atttaacaaatgttttctggggtgacagtaTATATG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711849 206 + 127223203 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACTTGAAAAATAGACCACATGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGTTATGGCTA-----------TT----GGGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--aactt----------tggcttta---atttaacaaatgttttctggggtgacagtaTATATG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1178833 204 - 1799296 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACTTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGT--TGGCTA-----------TT----GAGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--aactt----------tggcttta---atttaacaaatgttttctggggtgacagtaTATATG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755693 206 + 6934359 GAAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAACGTGT--GGGGATATCAAT-ATTGTTATGGCTA-----------TT----GGGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--aactt----------tggcttta---atttaacaaatgttttctggggtgacagtaTATATG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117937 205 - 128169293 GGAAGCTGA-TTTTAAAATACTGAAATCATATAGATGACAGTACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTG---GGGGATATAAAT-ATTGTTATACCTA-----------TT----GGGGAGGAAAA----AATTAGTGAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------CTACTTGA---ATTTAACACATTTTCTCTGGGGTGACAGTATATATG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735284 203 - 18371965 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGTACCTGAAAAATAGACAACACCAAGCT---TGTTAAAAGGTGT--GGGGATATAAAT-ATTGTTATGCCTA-----------TT----GGGGAGG-AAA----AATCAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------CTACTTGA---ATTTAACAAATTTTCTCTGGGGTGACAGTATATGTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394738 203 + 3566421 GGAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGTACCTGAAAAATAG----CACCAAGCTTTGTGTTAAAGGGTGT--GGGGATATAAAT-ATTGTTATTCCTA-----------TT----GGGGAGGAAAA----GATTAGTAAAACCAGTGAGTTGAAGCTATTGCTTGA--AACTT----------CTACTTGA---ATTTAATAAATTTTCCCTGGGGTGACAATATATATG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896615 207 - 9267652 GGAAGCTGATTTTTAAAATACCGAAATCATATAGATGACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTGT--GGGGATATAAAT-ATTGTTATGCCTA-----------TT----GGGGAGGAAAA----AATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------CTACTTGA---ATTTAACAAATTTTCTCTGGGGTGACAGTATATATG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12759311 187 + 14340318 GGGAGGTGATATTTAAAATATTGA-ATCATATGAGTGACAGTAC-------------------------------AGAAGTTGTAGGGGAAAATAAAT-AAGGT--GTGCCA-----------TTAAGGGAGGAGAGAAA-----ATTTAACAAACTAATGAGTCAAAAATGTTAATTCC--AACTTGTTGCTATTCTAATGCAA---ATTGCACCAATGTTCTCCAGGGTGACGG-GTATGTG i otoGar3.GL873564 I 58 C 0 s canFam3.chr18 51767340 228 - 55844845 GGGAATTAATTTTTCAAACACTGA-ATCATATAGATGACAGTACAGAAGAACCGGAAGGCCCCAGCCTTCATGGTAAAGGAAATA-GGGGAAGTTAATCATTTATGTGGATGGAGACATAAATTT----GGAGAGGAGAAAACAAATTAGCAAAATTGATGAGTGAAAGCTGTTGATATACTAACGC----------AAATTTAATGCATTTAACACATGTTGTCTGGGGTGACATTATGTAGG i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743908 974 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e dasNov3.JH578441 1202059 1417 + 1446996 I a score=7558364.000000 s hg38.chrUn_KI270749v1 60218 630 + 158759 TAACCATGC---------------------TATGCCCATTCACAGATGCAGTAGAGGGAAGAATTTCTCAAAGACAACTG---TTCTAAGATTGAAATTAAATCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATATCAGATAAAAGAGATTGTGAGGTA--TGCGATGATAATCAGCAATGGTTGTTCACACAATGCATCAAATCAGTATTTGAATTAGC-TTTTGAATTCCAAGGACAAATGGATCAAGTCTAGACTCTTTAGTAGA---TAAATCTTATTAGGCTGAGATGTGTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTTTCACCAAGTCAAAAG--CTG--AAGTTCATCAATCAGTG--TATCTAAGTGTTCACTGGTTATATACCATTTTGTAGTTTCA-GCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGATCTTGTTTTTTTCCACTATCACTTCTTTATTGACCATATAAAGA--ATATA--AGTAAGTTATTATCTTGTTATTGTTCATTTTAGTCTAATTTCATCAAAATATCACAATC--TGAATTTCATTTTAATTTCAAAGAT-TAAATGAAACCTACATCGAAATGAGTGTAAGA s panTro5.chr22 3546915 631 + 37823149 TAACCATGC---------------------TATGCCCATTCACAGATGCAGTAGAGTGAAGAATTTCTTAAAGACAACTG---TTCTAAGATTGAAACTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAAGAATTATCAAATATTTTAGATATCAGATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTCACACAATACATCAAATCAGTGTTTGAATTAGC-TTTTGAATTATAAGGACAAATGGATCAAGTCTTGACTCTTCAGTAGA---TAAATCTTGTTAGGCTGAGATGTGTTTTCCCCTCTTTTTCCAC-AGGAGATTACAAATTCGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATTAATCAGTG--TGTCTAAGTGTTCACTAGTTATATACCATTTTGTAGTTTCA-GCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGACCTTGTTTTTTTCCACTATCACTTCTTTACTGACCATATAAAGA--ATATA--AGTAAGTGCTTATTTTGTTATTGTTCATGTTAGTCTAATTTCATCAAAATATCATAATCCTTTAATTTCATTTTAATTTCAAACAT-TAAATGAAACCTACATAGAAATGAGTGTAAGA i panTro5.chr22 C 0 C 0 s panPan2.chr7 108525165 627 - 162613886 CATCCATGT---------------------TATGCCCATTCATAGATGCACTAAAGTGAAGAATTTCTCAAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTAACAAATATTTTAGATATCAAATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACAATATATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTATATACCATTTTGTAGTTTAA-GCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGTGGTTGTTTTTTTCCACTATCACTTCTTTATTGACCATATAAAGA--ATATA--AGTAAGCTCTTATTTTGTTGTTGTTCATTTTAGTCTAATTTCATCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAATAT-T-----AAACCTACATATAAATGAGTGTAAGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 39885 631 - 126596 TAACCATGC---------------------TATGCCCATTCACAGATGCAGTAGAGGGAAGAATTTCTCAAAGACAACTG---TTCTAAGACTCAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATATCAGATACAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTCACACAATACATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTAGACTCTTTAGTAGA---TAAATCTTATTAGGCTGAGATGTGTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAGTG--TGTCTAAGTGTTCACTGGTTATATACCATTTTGTAGTTTCA-GCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGATCTTG-TTTTTTCCACTATCACTTCTTTATTGACCATATAAAGA--ATATA--AGTAAGTTCTTATTTTGTTATTGTTCATTTTAGTCTAATTTCATCAAAAGATCACAATCTTTTAATTTCATTTTAATTTCAAAGAT-TAAATGAAACCTACATAGAAATGAGTGTAAGA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55775958 629 + 99891981 TATCCATGT---------------------TATGCCCATTCACAGATGCAATAAAGGGAAGAATTTCTCAAAGATAACTG---TTCTAAGATTGAAATTAAACTGTACTGGGTATGAAAAGAGAAAGTCCAGAAATTAACAAATATTTTAGATATCAGATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATTGTTGTTAACACAATATATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTATAATGAGATGTCTTTTCCC--ATTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--CCTCTAAGTGTTCACTAGTTATATACCGTTTTGTATTTTAA-GCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGTTCCTG-TTTTTCCCTCTATCACTTCTTTGTTGACCATATAAAGA--ATATA--AGTAAGTTCTTATTTTGTTATTGTTCATTTTAGACTAATTTCATCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGAT-TAAATTAAAACTACATATAAATGAGTGTAAGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133474149 620 - 185818997 TACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAGAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTCCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCCGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCATTCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTATCTTTTCAACTTCCTAAATCATCATCTTCATTTGTTCTTGCTTTTTTCCACTATCACTTCCTTATTAACCATATAAAGA--ATG-------------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGAT-TAAATTAAACCTACATATAAATGAATGTAAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303832 620 + 192294377 TACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAATAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTCCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCGAAAG--CTG--AAGTTCATCATTCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTGCTTTTTTCCACTATCACTTCCTTATTAACCATATAAAGA--ATG-------------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGAT-TAAATTAAACCTACATATAAATGAATGTAAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785691 620 + 3123512 TACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAGAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTCCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTACATACAGTTTTGTAGTTTAA-GCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTGCTTTTTTTCACTATCACTTCCTTATTAACCATATAAAGA--ATG-------------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGAT-TAAATTAAACCTACATATAAATGAATGTAAGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506368 620 + 10077455 TACCCATGT---------------------TATTCCTATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAATCGTACGGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTGCTTGTTTCCACTATCACTTCCTTATTAACCATATAAAGA--ATG-------------TTATTTT-TTATTGTTCATTTTACTCTACTTTCATCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGAT-TAAATTAAACCTACATATAAATGAATGTAAGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5712055 620 + 127223203 TACCCATAT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCATACTGGGTTTGAAAAGAGAAAGTCTAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAATGCCAAGTA--TGCGATGATAATTAGCAATGGTTGTTAACACGATACATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTATCTCTTCAACTTCCTAAATCATCACCTTCATTTATTCTTGCTTTTTTCCACTATCACTTCCTTATTGACCATATAAAGA--ATG-------------TTATTTT-TTATTGTTCATTTTTCTCTAATTTCATCAAAATTTAAAAATCCTTTAATTTTATTTTAATTTCAAAGAT-TAAATTAAACCTACATATAAATGAATGTAAGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1179037 620 - 1799296 TACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTTAGTGCTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTGCTTTTTTCCACTATCACTTCCTTATTAACCATATAAAGA--ATG-------------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAATTTAATAATCCTTTAATTTCATCTTAATTTCAAAGAT-TAAATTAAACCTACATATAAATGAATGTAAGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755899 622 + 6934359 TACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTTTCCAAGACAACCG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCTAGGAATTACCAAATATTTTAGATGTCAGACAAAAGAGAATGCCAGCTA--TGCGATGATAATCAGCAATGGTTGTTAACACAATACATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTACTATGCTGAGATGTCTTTTCCTCTGTTTTTCCACAAGGAGATCACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTGTCTTTTCTACTTCCTAAATCATCACCTTCATTTGTTCTTGCTTTTTTCCACTATCACTTCCTTATTGACCATATAAAGAATATG-------------TTATTTTGTTATTGTTCATTTTACTCTAATTTCATCAAAA-TTAATAATCCTTTAATTTCATTTTAATTTCAAAGAT-TAAATTAAACCTACATATAAATGAATGTAAGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108118142 634 - 128169293 TATCCATGT---------------------TATTCCCATTCACAGAGGCACTAGAGGTAAGAATTTCTCAAAAACAACTGAGAATCTAAGACTAAAATGAAACCCTACTGGATTTGAAAAGAGAAGGTCCAGAAATT-CCAAATATTTTAGATGTCAGATAACAGAGAATGCCAGGTGTATGCGATGATAATCAGCAATGATTGTTAACACAATATATCAAATCAGTATTTGAATTAGC-TTTTAAATTACAAGGACGAATGGATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTATGCTGGGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCGCTAAGCCAAAAA--CTG--AAGTTCATCAATCAATG--TCTCTAACTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-G--CTCTTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTGTTTTTTTCCACTATCACTTCCTTATTGACCATATAATTA--ATATA--AGTAGCTTCTTATTTTGTTAGTGTTCATTTTAGTCTAATTGCACCAAAATTTAATAATCCTTTAATTTTATTTTAATTTCAAAGAT-TACATTAAATCTACATATAAATGAGTGTAAGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735487 645 - 18371965 TATCCATGTGTATATATGAATCCATGAATGTATTCCCATTCACAGATGCACTAGAGGTAAGAATTTCTCAAAAACAGCTG---TTCTAAGACTGAAATGAAACCCTACTGGATTTGAAAAGAGAAAGTCCAGAAATT-CCAAATATTTTAGGTGTCAGATAACAGAGAGTACCAGGTT--TGTGATGATAATCAGCAATGGTTGTTAACACAATATATCAAATCAGTATTTGAATTAGC-TTTTGGATTACAAGGACAAACGGATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTATGCTGCGATGTCTTTTCCCCTGGTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTTGCTAAGCCAAAAG--CTG--AATTTCATCAATCAATG--TCTCTAACTGTTCACTAGTTGTATACACTTTTGTAGTTTA--------TTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTGTTTTTATTCACTATCGCTTCCTTATTGACCATATAATGA--ATATA--AGTAACTTCTTATTTTGTTAGTGTTCATTTTAGTCTAATTTCACCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGAT-TACATTAAACCTACATATAAATGAGTGTAAGA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394941 617 + 3566421 TATCCATGT---------------------TATTCCCATTCACAGATGTGCTAGAGGTAAGAAATTCTCTAAAACAACTG---TTCTAAGACTGAAATGAAACCCTACTGGATTTGAAAAGAGAAGGTCCAGAAATT-TCAAATATTTTAGATATCAGATAACAGAGAATGCCAGGTA--TGAGATGATAATCAGCAATGGTTGTTAATACAATATATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGTATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTTTGCTAGGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATT------------ACCTCAGCTGCTCTCATTTTATGCTCTCGCTAAGCCAAAAC--CTG--AAGTTCATCAATCAATG--TCTCTAACTGTTCACGAGTTATATACAGTTTTGTAGTTTAA-G--CTCTTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTGTTTTTTTCCGCTATCACTTCCTTGTTGACCATATAATGA--ATATA--AATAACTTCTTATTTTGTTAGTGTTCATTTTAGTGTAATTTCACCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGAT-TACATTAAACCTACATATAAATGAGTGTAAGA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896822 631 - 9267652 TATCCATGT---------------------TATTCCCATTCACAGATGCACTAGAGGTAAGAATTTCTTAAAAACAACTG---TTCTAAGACTGAAATTAAACCCTGCTGGATTTGAAAAGGGAAGGTCCAGAAATT-CCAAATATTTTAGATGTCAGATAACAGAGAATGCCAGGTA--TGTGATGATAATCAGCAATGGTTGTTAACACAATATATCAAATCAGTATTTGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTATGCTGGGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCGCTAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTAACTCTTCACTAGTTATATACAGTTTTGTAGTTTAA-AATATCTTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTGTTTTTTTCCACTATCACTTCCTTATTGACCATATAATGA--ATATA--AGTAACTTCTTATTTTGTTAGTGTTCATTTTAGTCTAATTTCACCAAAATTTAATAATCCTTTAATTTCATTTTAATTTCAAAGAT-TACATTAAACCTACATATAAATGAGTGTAAGA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12759498 570 + 14340318 TATCTGTGC---------------------TATTCCTGTGCACAGATGTACT-GAGGGAAAGATTTCTCAGAGACAACTG---CTCCAATATTGAAATTAAGCCATCCTGGCTCTGAAAAGAGAAAACCTAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAACGCCAGGGA--TGTGATGATAATCAGAAGTGGTTGTTAACGCAATATGTCAAATCAATATTTAAATTAAC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTATGTTCAGATTTCTTTTCCCCTGTTTCTCCACAAGGAGATTACAAATTTGCCAACCTTAGCTGGTCTCATTTTACACTCTTGTTAAGCCAGAAG--CTATTCAGTTCATCAATCAATGTCTCTCTAAGTGTGCACTGGTCATATACAGTTTTGTGGTTTAA-GCTGTTTTTCCAGCTTCCTAAATTATCACTTCTATTTG----TGTTCTTTTTCACTATCACTTCCTTATCAACCATATAATGA--AAAGA--AAA------CAATCTT------------------------------------AATAATCTTTGAATTTCACTTACACTTCAAAGAT-T-----AAACCCA------------TGCGA-- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51767568 629 - 55844845 CATCCATGG---------------------TTTCCACATTCGTAAATGTGGTAGAGAGAAAGATTTCTCAGAGGAAACTA--------AGATTGAAAATAGGCTATATACGGTT---GAAGAGAAAGTCC-GAGATTACTGAATATTTTAGATGTCAGATACAAGAGAATGACAGGTG--TGCTATGATAATCAGCAATGGCTGTTAACACAATATATCAGATCAGTATATGAATTAGC-TTTTGAATTACAAGGACAAATGGATCAAGTCTTAAGTCTTTAATAGATTCTTCTTCTTATTATGCTGAGATGTCTTTTTCCATGTTTTTCCACAGGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCCCACTAAGCCAGAAGCTCTA--TAGTTCATCAATCAATG--TCTCTAAGTGCTCACAAGTTATATACAGTTTTGTAGCTTAATGCTGCCTTTCCAACTTCCTAAATTATCACCTTCATTTATTCTTG-TTTTTTTCACTCTCACTTACTTATTAATCATAATAAAA--ATAAGACAGCAACTCCCTATCCCATTATTGTGAACTTTAGTCAACTTTC-TCCAAATTTAATAATCTTTGAA-TTCTTTCTCTCTCCatatatatatatataatatacataataatatatataata i canFam3.chr18 C 0 I 32 s dasNov3.JH578441 1203476 610 + 1446996 TATCCATTT---------------------TATTCTTATTCACTGATT-------GGGAAAGATTC-----------------CTCTAAGTTTGAAATTAAGCCACCTCCAGTCTGGAAAGAGAAAGTCCAGGAATTACTGATTAATTTAGATATCAGATAAAGGAGGAGGCCATGTA--GACTGTGCTAATCCACAGTGGTTGTTAACAAAATATATCAGATCCGTATTTGAATTAACTTTTTGAATTACAAGGACAAATGGATCAAGTCTTGAGTCTCAAATAGA---TTAATCTTATTATGCTGAGATGTCGTTTCCCCTGTTTTTCCATGAGGAGATTACAAATTTGCAAACCTCAGCCGCTTTTATTTTCTGTTCTTGCTAAGCTAGGAG--CTATTCAGTTCATCAATCAATG--TGTCTAAGTGCTCACAAGTTATACACAATTTTGTAGTTTAA-GCTTCCTTTCCAACTTTGTAAATAATTACTTTCATTTATTCTTATTCTTCTTCACTATCACTTCTTTTTTA--TATAGGAAAA--ACAAA--AAAGATAAATGATTCCATTATTGCTCATTTTAGTTTAATTTCTCCAAAGCTCAATAATC-TTTGGCTTCATTTAATTTTAAAAGAT-TATATCATCCCTAAAT-TAAATTAATATGTGC i dasNov3.JH578441 I 1417 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66743908 974 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I a score=12907.000000 s hg38.chrUn_KI270749v1 60848 1 + 158759 T s panTro5.chr22 3547546 1 + 37823149 T i panTro5.chr22 C 0 C 0 s panPan2.chr7 108525792 1 - 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 40516 1 - 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66744882 1 - 72422247 T i ponAbe2.chrUn I 974 I 384 s nomLeu3.chr17 55776587 1 + 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133474769 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67304452 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786311 1 + 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506988 1 + 10077455 T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5712675 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1179657 1 - 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756521 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108118776 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 736132 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1395558 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1897453 1 - 9267652 T i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12760068 1 + 14340318 C i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768229 1 - 55844845 T i canFam3.chr18 I 32 C 0 s dasNov3.JH578441 1204086 1 + 1446996 C i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I a score=4027246.000000 s hg38.chrUn_KI270749v1 60849 371 + 158759 TTGCATTTGCATTA-TTTTGGCATCAATTTGCTATCCTCCCTCAT--GCACAT------AGAGAT-CATTTCCATGTACGTGATTTCAAACATCCAAA-----------------TGCAGTATTAAAAGCAGTTGTAAATTATGGTTCTCATTTTCATGATACAATTACAAtataaacttcctcttgctgctgtaaccaattactacaaacttcatatcttacaataaagtgacc-gt------ta--atcctacggttctgtagttcagaagccttaaatgaaactcacagggctaactaacatcaagttttgggcagggctgcagtctttctgag-ggctat-gtggcagaatctatgtacttgatttttttcagcatccagaggccacctttattccttggaacat s panTro5.chr22 3547547 367 + 37823149 TTGCATTTGCGTTA-TTTTGGCATCAATTTGCTATCCTCCCTCAT--ACACCT------AGTGAT-CATTTCCATGTATGTGATTTCAAACATCCAAG-----------------TGCAGTATTAAAAGCAGTTGTAAATTATGGTTCTCATTTTCGTGATACAATTACtatataaacttcctcttgctgctgtaaccaattaccacaaacttcatatcttacaataaagtgact-gg------ta--atcctacagtactggagctcagaagccttaaatgagactcacaggg----ctaacatcaagatttgggcagggctgcaatctttctgag-ggctct-gtggcagcatctatgtacttgatttttttcagcatccagaggccacctttattctttggaacat i panTro5.chr22 C 0 C 0 s panPan2.chr7 108525793 384 - 162613886 TTGCATTTGCATTA-TTTTGGCAACAATTTGCTGTCCTCTTTCAT--ACACAC------AGAGAT-CATATCCATGTACAAGATTTCAAACATCCAAGCAAGAAGACGGGAAGGTTATAGTATTAAAAGCAGTTGTAAATTATGGTTCTCATTTTCATGATACAATTACtatataaacttcctcttgctgctgtaaccaattaccacaaacttcatatcttacaataaagtgacc-gt------ta--atcctacagttctggagttcagaagccttaaatcagactcacaggg----ctaacatcaagttgtgggcagggctgcagtctttctgag-ggctat-gtggcggaatctatgtacttgatttttttcagaatccagaagccacctttattccttggaacat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 40517 365 - 126596 TTGCATTTGCATTA-TTTTGGCATCAATTTGCTATCCTCCCTCAT--GCACAT------AGAGAT-CATTTCCATG-ACGTGATTTCAAACATCCAAG-----------------TGCAGTATCAAAAGCAGTTGTAAATTATGGTTCTCATTTTCATGATACAATTACAAtataaacttcctcttgctgctgtaaccaattaccacaaacttcatatcttacaataaagtgacc-gt------ta--atcctacagttctgtagttcagaagccttaaatgaaactcacaggg----ctaacatcaagttttgggcagggctgcagtctttctgag-ggctat-gtggcagaatctat-tacttgatttttttcagcatccagaggccacctttattccttggaacat i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55776588 384 + 99891981 TTGCATTTGCATTA-TTTTGGCATCAATTTGCTGTCCTCCCTCAT--ACACAC------AGAGAT-CATATCCATGTACATGATTTCAAACATCCAAGCAAGAAGACGGGAAGGTTGCAGTATTAAAAGCAGTTGTAAATTATGGTTCTCATTTTCATGATACAATTACtatataaacttactcttgctgctgtaaccaattaccacaaacatcatatcttacaataaagtgacc-gt------ta--atcctacagttctggagttcagaagccttaaatgagactcacaggg----ctaacatcaagttgtgggcagggctgcagtctttctgag-ggctat-gtggcagaatctatgtacttgatttttttcagaatccagaggccacctttattccttgaaacat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133474770 384 - 185818997 TTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCAT--ACACAT------AGAGAT-CATATCCATGTACCTCATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacaggg----ctaacatcaagttgtgggcagggctgcagtctttctgag-ggctat-gtggcagaatctatgtacttga-ttttttcagcatccagaggccaccttcattccttggaacat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67304453 384 + 192294377 TTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCAT--ACACAT------AGAGAT-CATATCCATGTACCTCATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacaggg----ctaacatcaagttgtgggcagggctgcagtctttctgag-ggctat-gtggcagaatctatgtacttga-ttttttcagcatccagaggccaccttcattccttggaacat i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786312 384 + 3123512 TTGCATTTGCATTATTTTTGGCATCAATTTGCTGCCCTCCGTCAT--ACACAT------AGAGAT-CATATCCATGTACCTCATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacaggg----ctaacatcaagttgtgggcagggctgcagtctttctgag-ggctat-gtggcagaatctatgtacttga-ttttttcagcatccagaggccaccttcattccttggaacat i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506989 384 + 10077455 TTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCAT--ACACAT------AGAGAT-CATATCCATGTACCTCATTTCAAATATCCAAGCAACAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacaggg----ctaacatcaagttgtgggcagggctgcagtctttctgag-gactat-gtggcagaatctatgtacttga-ttttttcagcatccagaggccaccttcattccttggaacat i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5712676 384 + 127223203 TTGCATTTGCATTAGTTTTGGCGTCAATTTGCTGTCCTCCCTCAT--ACACAT------AGAGAT-CATATCCATGTACCTCATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGCTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacaggg----ctaacatcaagttgtgggcagggctgcaatctttctgag-ggctat-gtggcagaatctatgtacttga-ttttttcagcatccagaggccaccttcattccttggaacat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1179658 384 - 1799296 TTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCAT--GCACAT------AGAGAT-CATATCCATGTACCTCATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacaggg----ctaacatcaagttgtgggcagggctgcagtctttctgag-ggctat-gtggcagaatctatgtacttga-ttttttcagcatccagaggccaccttcattccttggaacat i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756522 385 + 6934359 TTGCATTTGCATTATTTTTGGCATCAATTTACTGTCCTCCCTCAT--ACACAT------AGAGAT-CATATCCATGTACATGATTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgactggc------ta--atcctacagttctggagttcagaagccttaaatgagattcacaggg----ctaacgtcaagctgtgggcagggctgcagtctttctgag-ggctat-gtggcagaatctgtgtacttga-ttttttcagcatccagacgccaccttcattccttggaacat i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108118777 383 - 128169293 TTGCATTTACATTGTTTTGGGCATCAATTTGCTATACTCCCTCAT--ACACAT------AGAGAT-CATATCCATGCACATGATTTCAAACATCCAAGCAAGAAGCTGGGAAGGGTGCAATATTAAAAGCAGTGGTCAATTACGGTTCTCAACTTCATGACAAAATCACtatatcaacttactcttgctgctggaatcagttgccacaaacttagtatc-tacaataaagtgact-gt------ta--atcttacagttctggagttcagaagtctgaaatgagactcacaggg----ttaatgtcaagttgtgggctgggctgcattctttctgag-gatgct-gtggcagaaactatgtacttaa-ttttttcagcatctagaggccaccttcattccttggaacgt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 736133 381 - 18371965 TTGTATTTAAATTGTTTTTGGCATCAATCTGCTGTACTCCCTCAT--ACACAG------AGAGAT-TATATCCA-GCACATGGTTTCAAACATCCAAGCAAGAGGATGGGAAGGTTGCAATATTAAAAGCAGTGGTCAATTATGGTTCTCACTTTGATGATAAAATTACtatataaacttcgtctcgctgctataaccagttgccacaaacttagtttt-tacaataaagtgact-gt------ta--atcttacaattctggagttcagaagtctgaaatgagattcacaggg----ctaactttgagttgttagc-aggctgcattctttctgag-gactat-gtatcagaacctatgcacttaa-ttttttctgtgtctagaggccaccttcattccttggaacac i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1395559 382 + 3566421 TTGCATTTACATTGTTTTTGGCATCAATCTGCTACGCTCCCTCAT--ACACAG------AGAGAT-TATATCCA-GCACATGATTTCAAGCATCCAAGCAAGAAGATGGAAAGGTTGCAACATTAAAAGCAGTGGTCAATTATGGTTCTCACTTTCATGATAAAATTGCtatataaacttcctcttgctgctgtaaccagttgccaccaacttagtatc-tacaataaagtgact-gt------ta--atgttacagttctggagttcagaagtctgaaatgagactcacaggg----ctaacgtcgagttgttggcagggctgcattctttctgag-gacgat-gtggcagaatctatgtatttaa-ttttttctgcttctagaggccaccttcattccttggaacat i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1897454 384 - 9267652 TTGCATTTACATTGTTTTTGGCATCAATTTGCTGTACTCCCTCAT--ACACAT------AGAGAT-CATATCCATGCACATGGTTTCAAACATCCAAGCAAGAAGATGGGAAAGTTGCAATATTAAAAGCAGTGGTCAATTACGGTTCTCACTTTCATGATAAAATTACTATTTAAACttcctcttgctgctgtaaccagttgccacaaacttagtatcttacaataaagtaact-gt------ta--atctgacagttctggagttcagaagtctgaaatgagactcacaggg----ctaacatcgagttgtgggcagggctgcattctttctgag-gacgat-gtggcagaatctatgtacttaa-ttttttctgtgtcaagaggccaccttcattccttggaacat i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12760069 385 + 14340318 TAATTTTTACATTA-TTTTGGCATCAATTTTTGATTCTCCTTCAC--ACACAT--AAACAGAGAC-CATATGCAAGCCCATGATTTCAG----TCAAGC-AGAACACAGGCATGTT----TAGTAAGACTGGTGGTAAATTACGGTCATCAGTCTCACAGTGGGATTAGtgtatgagcttcctattgctactgcaacaaattgccacaaatttagtgatgcaaaacaagccaact-atgtaatgtt--atcctaccattccagcagtcagaagtctgaagtggggcttccaagg----ctaaaatcaagctgtggacaggtcccctcttcctcccagcagctgt-gtgggaggatctgttcctttga-tttttccagcatctgggcactgccttcattccttggaccac i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768230 374 - 55844845 TTGCATATACTGCATTATTAGTGTGAGTGTGCTATACCCCTCCAT--ACACATGCAAGTAGAGA--CATACCCATATCCACAATATCAAACATCCAACCAAGGA-ACAAAAAGGTTGCAGTTGTAGGACCAGTGATAAATCATAGTCCCCTCTCTTGAGATAAGATTAGtgtattagcttc------ttgctgtaacagattaataccaatttagcgaattaaaacaaa-taaat-gt------tattatcttcaagtc----------aaagtctgaagtaggaccaaaagca----gaaagtcaaggttatcgggagggctgccttcctactgca-ggctttaatgggaaaatgttttccttcaa-tatttccagcatgtggagattgcctgcattccttggctcat i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1204087 380 + 1446996 TTATATTTCCATTA-TTCTGTTGTAAATTTGCTATACCCGCTCATGAAAACAT------TGACATACATATCTATGACAAGAATTTTAAGCACCCAGCCAAGTAGGCAGGAAAGCTTGAGTCTTAAGACAAGTC-TGAATTACAGTCATCTCTCTCATGATAAGATTAGTGTACGTgcttcctattgctgctataacaaattcccacaaacttaatggcttaaaataaggccgtt-at-----att--actttatggttctggattttaaaggtctgaaatca----tatgggg----ctaaaatcaaggtgtcagcaggattgagttcctttggga-ggctct-aggg--gcaatcacttccttga-cttttccaggacctagaggccaacctgtttctgtgtctagt i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66744883 384 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I a score=144324.000000 s hg38.chrUn_KI270749v1 61220 12 + 158759 gacctcattctt s panTro5.chr22 3547914 12 + 37823149 gacctcattctt i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526177 12 - 162613886 ggcctcattctt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 40882 12 - 126596 gacctcattctt i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133475154 12 - 185818997 ggcctcattctt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67304837 12 + 192294377 ggcctcattctt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786696 12 + 3123512 ggcctcattctt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2507373 12 + 10077455 ggcctcattctt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713060 12 + 127223203 ggcctcattctt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180042 12 - 1799296 ggcctcattctt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756907 12 + 6934359 ggcctcattctt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108119160 12 - 128169293 ggcctcattctt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 736514 12 - 18371965 ggcctcaatctt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1395941 12 + 3566421 ggccccattctt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1897838 12 - 9267652 ggcctcattctt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12760454 12 + 14340318 agcctctctctc i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768604 12 - 55844845 ggcttcactctt i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1204467 12 + 1446996 ggccacattcct i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66744883 384 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=16745.000000 s hg38.chrUn_KI270749v1 61232 5 + 158759 ---atatc s panTro5.chr22 3547926 3 + 37823149 ---ata-- i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526189 3 - 162613886 ---aca-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 40894 5 - 126596 ---agatc i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133475166 5 - 185818997 ---acatc i rheMac8.chr3 C 0 I 2 s macFas5.chr3 67304849 5 + 192294377 ---tcatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786708 5 + 3123512 ---acatc i macNem1.NW_012011522v1 C 0 I 1 s cerAty1.NW_012000909v1 2507385 5 + 10077455 ---acatc i cerAty1.NW_012000909v1 C 0 I 1 s chlSab2.chr21 5713072 5 + 127223203 ---acatc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180054 5 - 1799296 ---acgtc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756919 5 + 6934359 ---acatc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108119172 5 - 128169293 ---acatc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 736526 5 - 18371965 ---acatc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1395953 5 + 3566421 ---acatc i cebCap1.NW_016107540v1 C 0 I 217 s aotNan1.NW_018514471v1 1897850 5 - 9267652 ---acatc i aotNan1.NW_018514471v1 C 0 I 217 s otoGar3.GL873564 12760466 5 + 14340318 ---ccatc i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1204479 5 + 1446996 ttaac--- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66744883 384 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e canFam3.chr18 51768616 0 - 55844845 C e nomLeu3.chr17 55776972 0 + 99891981 C a score=2152.000000 s hg38.chrUn_KI270749v1 61237 1 + 158759 c s gorGor5.CYUI01000522v1 40899 1 - 126596 c i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 67304854 1 + 192294377 t i macFas5.chr3 C 0 C 0 s chlSab2.chr21 5713077 1 + 127223203 t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180059 1 - 1799296 t i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756924 1 + 6934359 t i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108119177 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 736531 1 - 18371965 t i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12760471 1 + 14340318 t i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 1204484 1 + 1446996 t i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66744883 384 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e macNem1.NW_012011522v1 2786713 1 + 3123512 I e rheMac8.chr3 133475171 2 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51768616 0 - 55844845 C e cerAty1.NW_012000909v1 2507390 1 + 10077455 I e nomLeu3.chr17 55776972 0 + 99891981 C e panPan2.chr7 108526192 0 - 162613886 C e panTro5.chr22 3547929 0 + 37823149 C a score=-971.000000 s hg38.chrUn_KI270749v1 61238 2 + 158759 ta s gorGor5.CYUI01000522v1 40900 2 - 126596 ta i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 67304855 1 + 192294377 t- i macFas5.chr3 C 0 I 2 s chlSab2.chr21 5713078 2 + 127223203 tt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180060 2 - 1799296 tc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756925 2 + 6934359 tc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108119178 2 - 128169293 ta i calJac3.chr8 C 0 I 215 s saiBol1.JH378145 736532 2 - 18371965 ta i saiBol1.JH378145 C 0 I 214 s otoGar3.GL873564 12760472 2 + 14340318 ta i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66744883 384 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e macNem1.NW_012011522v1 2786713 1 + 3123512 I e rheMac8.chr3 133475171 2 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51768616 0 - 55844845 C e dasNov3.JH578441 1204485 0 + 1446996 C e cerAty1.NW_012000909v1 2507390 1 + 10077455 I e nomLeu3.chr17 55776972 0 + 99891981 C e panPan2.chr7 108526192 0 - 162613886 C e panTro5.chr22 3547929 0 + 37823149 C a score=1332.000000 s hg38.chrUn_KI270749v1 61240 2 + 158759 tt s gorGor5.CYUI01000522v1 40902 2 - 126596 tt i gorGor5.CYUI01000522v1 C 0 C 0 s chlSab2.chr21 5713080 2 + 127223203 tc i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 1180062 2 - 1799296 tt i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 1756927 2 + 6934359 tt i colAng1.NW_012115910v1 C 0 I 2 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66744883 384 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12760474 0 + 14340318 C e macNem1.NW_012011522v1 2786713 1 + 3123512 I e rheMac8.chr3 133475171 2 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51768616 0 - 55844845 C e dasNov3.JH578441 1204485 0 + 1446996 C e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e cerAty1.NW_012000909v1 2507390 1 + 10077455 I e macFas5.chr3 67304856 2 + 192294377 I e nomLeu3.chr17 55776972 0 + 99891981 C e panPan2.chr7 108526192 0 - 162613886 C e panTro5.chr22 3547929 0 + 37823149 C a score=13954.000000 s hg38.chrUn_KI270749v1 61242 7 + 158759 tttcttt s panTro5.chr22 3547929 1 + 37823149 ------t i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526192 1 - 162613886 ------t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 40904 4 - 126596 ttt---c i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66745267 7 - 72422247 ttttttt i ponAbe2.chrUn I 384 I 494 s rheMac8.chr3 133475173 7 - 185818997 ctttttt i rheMac8.chr3 I 2 C 0 s macFas5.chr3 67304858 7 + 192294377 ttttttt i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 2786714 7 + 3123512 tcttttt i macNem1.NW_012011522v1 I 1 C 0 s cerAty1.NW_012000909v1 2507391 7 + 10077455 tcttctt i cerAty1.NW_012000909v1 I 1 C 0 s chlSab2.chr21 5713084 7 + 127223203 ttttttt i chlSab2.chr21 I 2 C 0 s manLeu1.NW_012105809v1 1180066 7 - 1799296 ttttttt i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 1756931 7 + 6934359 ttttttt i colAng1.NW_012115910v1 I 2 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e otoGar3.GL873564 12760474 0 + 14340318 C e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51768616 0 - 55844845 C e dasNov3.JH578441 1204485 0 + 1446996 C e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=301873.000000 s hg38.chrUn_KI270749v1 61249 87 + 158759 ctt---tttttttttttgagatggagtctccttctgtcatccaggctggagcgcagtggcacgatctcagctcactgcaacctctgcctc s panTro5.chr22 3547930 87 + 37823149 ctt---ttttttttcttgagatggagtctccttctgtcgcccaggctggagtgcagtggcatgatctcagctcattgcaacctctgcctc i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526193 90 - 162613886 cttaccttttttttttgtagatggagtcttgttatgtcacccaggctggagtgcagtggtgcgatctcagctcactgcaacctccgcctc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 40908 86 - 126596 ttt---tttttttttttgagatggagtctccttctgtcaccc-ggctggagtgcagtggcatgatctcagctcactgcaacctctgcctc i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133475180 87 - 185818997 ttt---tttttttttttgtgacggagtctcgctctgtcacccagactggagtgcagtggcgcaatctcagctcatcgcaacttccgtctc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67304865 87 + 192294377 ttt---tttttttttttgtgacggagtctcgctctgtcacccagactggagtgcagtggcgcaatctcagctcatcgcaacttccgtctc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786721 83 + 3123512 ttt---tttttttttttgtgacgga----cgctctgtcacccagactggagtgcagtggcgcaatctcagctcatcgcaacttccgtctc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2507398 87 + 10077455 ctt---tttttttttttttttttgagtctcgctctgtcacccagactggagtgcagtggcgcaatctcagctcatcgcaacttccgtctc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713091 75 + 127223203 ttt---tttttttttttgagacgacgtctcgctctgtcacc------------cagtggcgcaatctcagctcatcgcaacctccgtctc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180073 81 - 1799296 ttt---tttttttttttt------ttttttgctctgtcacccaggctggagtgcagtggcgcaatctcagctcatcgcaacttccgtctc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756938 87 + 6934359 tct---tttttttttttgagacggagtctcgctctgtcacccagactggagtgcagcggcgcaatctcagctcatagcaacctccgtctc i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760474 38 + 14340318 -----------------------------------------aaagccaga----aatgccaccatctc-------tgtgttctctccctt i otoGar3.GL873564 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66745274 494 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51768616 0 - 55844845 C e dasNov3.JH578441 1204485 0 + 1446996 C e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=855245.000000 s hg38.chrUn_KI270749v1 61336 224 + 158759 ccgggttcaagtgattcttctgcctcagcttcctgagta----gcttggactacaggcacttgccaccattcccagttattttgtttttgtatttttagtagggtaggggtttcaccatgttagccagaatggtctccatctcctgacctcgtgatccacccaccccagcctcccaaactgttgggattaggcgtgagccactgcgctgggtcctcattctggtatca s panTro5.chr22 3548017 221 + 37823149 ccgggttcaagtgattcttctgcctcagcttcctgagta----gcttagactacaggcacgtgccaccatgcccagataat---tttttgtatttttaggagggatggggtttcaccatgttagccaggatggtgtcgctctcctgacctcgtgatccacccaccacggcctcccaaagtgctgggattaggcgtgagccaatgcgctgggtcctcattcttgtatct i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526283 221 - 162613886 ccgggttcaagcaattctcctcccttagcttcctgagta----gcttggactacagacacgtgccaccacacccagctaat---tttttgtatttttagtagagatggggtttcaccatgttagccaggttggtctcgatctcctgacctcatgatccacccaccccggcctcccaaagtgctgggattaggtgtgagccaccgcactgggtcctcattcttatatct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 40994 220 - 126596 ccgggtacaagtgattcttct-cctcagcttcctgagta----gcttggactacaggcacttgccaccacgcccagttaat---tttttgtatttttagtagggatggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgataaacccaccccagcctcccaaagtgctgggattaggcatgagccaccacgctgggtcctcattcttgtatct i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133475267 225 - 185818997 ccaggtccaagtgattctcctgcctcagcctcctgagtagcttgcttggactacaggcacccgctaccatgcccagctaat---gttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67304952 225 + 192294377 ccaggtccaagtgattctcctgcctcagcctcctgagtagcttgcttggactacaggcacccgctaccatgcccagctaat---gttttgtacttttagtagagacggggtttcaccatgttagccaggatggtctcggtctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatct i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786804 225 + 3123512 ccaggtccaagtgattctcctgcctcagcctcctgagtagcttgcttggactacaggcacctgctaccatgcccagctaat---gttttgtaattttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2507485 225 + 10077455 tcaggtccaagtgattcccctgcctcagcctcctgagtagcttgcttggactacaggcacccgctaccatgcccagctaat---gttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatcacctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatct i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713166 221 + 127223203 ccaggttcaagtgattcttctgcctcagcctcctgagta----gcttggactacaggcacccgctaccacgcccagctaat---tttttgtatttttagtagagacggggtttcaccatattagccaggatggtctcgatctcctggcctcatgaatcacccacctcggactcccaaagagctgggattaggtgtgagccaccacgccaggtcctcattcttatatct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180154 225 - 1799296 ccaggtccaagtgattctcctgcctcagcctcctgagtagcttgcttggactacaggcacccgcgaccatgcccagctaat---gttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacaccaggtcctcattcttacatct i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757025 220 + 6934359 ccaggttcaagtgattctcctgcctcagcctcctgagta----gcttggactacaggcacccgctaccacgcccagctaat---ttttggtatttttattagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcgtgattcacccacc-cggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttatatct i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760512 61 + 14340318 ctg---------------cctgcctctact-------------actta---taaagaagcttgcgactacactgggctcac------------------------------------------------------------------------------------------------------------------------ccacaccggat---------------- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768616 31 - 55844845 ------------------------------------------------------------------ccgtgtaaaagtcat----------------------------------ccatgttgg---------------------------------------------------------------------------------gccaagt---------------- i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66745274 494 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e dasNov3.JH578441 1204485 0 + 1446996 C e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=875524.000000 s hg38.chrUn_KI270749v1 61560 182 + 158759 taaaagtcagtgatgttgagtaa----tttctcatgccaccacctccaaggttgcc--tttcgtctgccttcttctttcacttataaggaagtttgtgatttcattgatcccacccatttaagataatct-----atc--------atttttcc-ac-----aaccttaatttcacttgaaat-ctaatttcac-actgccgtgcaacc s panTro5.chr22 3548238 186 + 37823149 taaaagtcagtgatgttgagtaa----tttctcatgccaccacctccatggttgcc--tttcttctgccttcttctttcacttataaggaagcttgtgatttcattggtcccaacaatttaagaaaatctctc-catc--------attttatt-gc-----aaccttaatttcacttgaaat-ctaatttccc-actgccacgcaacc i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526504 186 - 162613886 taaaagtcagtgatgttgagtta----tttctcatgctaccacctccatgtttgtc--tttcttctgccttcttctttcacttataagaaagcttgtgatttcattgagcccacccatttaagataatctctc-catc--------attttatt-gc-----aaccttaatttcacttgaaat-ctaatttccc-actgccatgcaacc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41214 184 - 126596 taaaagtcagtgatgttgagtaa----tttctcatgccaccacctccaaggttgcc--tttcttc-gccttcttctttcacttataatgaagtttgtgatttcattgatcccacccatttaagacaatctctc-tatc--------atttttcc-ac-----aaccttaatttcacttgaaat-ctaatttcac-actgcc-tgcaacc i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133475492 186 - 185818997 taaaagtcagcgatgttgagtta----ttcctcacgccgccacctccatggttatc--tttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--------attttatt-gc-----aaccttaatttcatttgaaat-ctaatttcct-actgccatgcaacc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67305177 186 + 192294377 taaaagtcagcgatgttgagtta----ttcctcacgccgccacctccatggttatc--tttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--------attttatt-gc-----aaccttaatttcatttgaaat-ctaatttcct-actgccatgcaacc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2787029 186 + 3123512 taaaagtcagcgatgttgagtta----ttcctcacgccgccacctccatggttatc--tttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--------attttatt-gc-----aaccttaatttcatttgaaat-ctaatttcct-actgccatgcaacc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2507710 186 + 10077455 taaaagtcagcaatgttgagtta----ttcctcacgccgccacctccatggttatc--tttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--------attttatt-gc-----aaccttaatttcatttgaaat-ctaatttcct-actgccatgcaacc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713387 186 + 127223203 taaaagtcagcgatgttgagtta----tttctcacgccgccacctccatggttatc--tttcttctgcctcctcctctcacttataaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--------attttatt-gc-----aaccttaatttcttttgaaat-ctaatttcct-actgccatgcaacc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180379 186 - 1799296 taaaagtcagcgatgttgagtta----ttcctcacgccgccacctccatggttatc--tttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatatctc-catc--------attttatt-gc-----aaccttaatttcatttgaaat-ctaatttcct-actgccatgcaacc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757245 186 + 6934359 taaaagtcagggatgttgagtta----tttctcatgccaccacctccatggttatc--tttcttctgcctccttctttcacttataaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--------attttatt-gc-----aaccttaatttcatttgaaat-ctaatttcat-actgccatgcaacc i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760573 78 + 14340318 ------------------------------------------------------------------------------------------aacctgc----------------cccatcttaggt-----------tc--------atttgattagc-----aaccttaatttcagttgctat-ctaatcccctcactgccatgtaatc i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768647 156 - 55844845 ----------------------a----tctctcatgtgg------tcatgttttgcagttccctctcctgtctcccttcac------------ttgtgatcacattggattcacccttccaggtccatctcccatatc---ag---agtcgatt-gctcagaaattttaactccatttacagt-ctaaattccc-actaccatgtaagc i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1204485 189 + 1446996 tgaaagtcaacaatgccaggccacatgtttctcatgttgccatt-------ctttc--tctcttctgcctccttattccacttaaaagaccac-tatgtcaatcttgggtcca-ccatccag--taatctccc-catctcaaggccagctgattagc-----aaatttaattccatctgcaccattgattcccc-cttgccaagtgatc i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66745274 494 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=41020.000000 s hg38.chrUn_KI270749v1 61742 5 + 158759 aaaca s panTro5.chr22 3548424 5 + 37823149 taaca i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526690 5 - 162613886 taaca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41398 5 - 126596 taaca i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66745768 5 - 72422247 taaca i ponAbe2.chrUn I 494 I 137 s rheMac8.chr3 133475678 5 - 185818997 taaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67305363 5 + 192294377 taaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2787215 5 + 3123512 taaca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2507896 5 + 10077455 taaca i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713573 5 + 127223203 taaca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180565 5 - 1799296 taaca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757431 5 + 6934359 taaca i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760651 5 + 14340318 taata i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768803 5 - 55844845 taaca i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1204674 5 + 1446996 taacc i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=752772.000000 s hg38.chrUn_KI270749v1 61747 137 + 158759 tatttgtatgttagactctgggaattaggacatgaaaatttttgggaggccattcttttgc--ctac----A-GCAGACATAA-TCTATTTACCTGCAGATTAAAGCGTTCTTTA-TTTTTCTGCCTCCCTCTCTT--------AATTTTTTTA s panTro5.chr22 3548429 137 + 37823149 tatttgtgtgttagactctgggaattagaacatgaacatttttgggaggccattctttttt--ctac----A-GCAGACATGA-TCTATTTACCTGCAGATTAAAGTGTTCTTTA-TTTTTCTGCCTCCCTCTCTT--------AATTTTTTTA i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526695 137 - 162613886 catttgtatgttagactctgggaattaggacatgaacgtttttgggaggccattattctgt--ctac----A-GCAGACATAA-TCTATTTACCTGCAGATTAAAGTGTTCTTTA-TTTTTCTGCCTCTCTCTCTT--------AATTTTTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41403 136 - 126596 tatttgtatgttagactctgggaattaggacatgaaaatttttgggaggccattctttggc--ctac----A-GCAGACATAA-TCTGTTTACCT-CAGATTAAAGCATTCTTTA-TTTTTCTCTCTCCCTCTCTT--------AATTTTTTAA i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133475683 137 - 185818997 tatttgtatgttaggctctgggaattaggacatgaacatttttgggaggccattatttcgc--ctac----A-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTA-TTTTTCTGCTTCCCTCTCTT--------AATTTTTTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67305368 137 + 192294377 tatttgtatgttaggctctgggaattaggacatgaacatttttgggaggccattattttgc--ctac----A-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTA-TTTTTCTGCTTCCCTCTCTT--------AATTTTTTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2787220 136 + 3123512 tatttgtatgttaggctctgggaattaggacatgaacatttttgggaggccattatttcgc--ctac----A-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTA-TTTTTCTGCTTCCCTCTCTT--------AA-TTTTTAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2507901 137 + 10077455 tatttgtatgttaggctctgggaattaggacatgaacatttttgagaggccattatttcgc--ctac----A-GTAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTA-TTTTCCTGCTTCCCTCTCTT--------AATTTTTTAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713578 137 + 127223203 tatttgtatgttaggctctgggaattaggacctgaacatttttgggaggccattatttcgc--ctaT----A-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTA-TTTTTCTGCTTCCCTCTTTT--------AATTTTTTAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180570 137 - 1799296 tatttgtatgttaggctctgggaattaggacatggacatttttgggaggccattatttcgc--ctac----A-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTA-TTTTTCTGCTTCCCTCTCTT--------AATTTTTTAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757436 137 + 6934359 tatttgtatgctaggctgtgtgaattaggacatgaacatttttgggaggccattatttcac--ctac----G-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTCTA-TTTTTCTGCTTCCCTCTCTT--------AATTTTTTTA i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760656 129 + 14340318 tattta-----tagattctggg--ttagtacatggacatttctgggatgcctttattttccttctac----aTTTAAACATAA-TATATTTACGTATAGATTAAAATGTTCTTGG-TTTTCCTGCCTCCCACt------------attttataa i otoGar3.GL873564 C 0 I 10 s canFam3.chr18 51768808 134 - 55844845 tagct-----ccaggttctgaagattaggacctgggcattttaaaggtgccattactttct--cttccataG-TTAGACATAAGTCTATTTACCTATAGATTAAAACGATCTTTGTTTTTTCTGTACTCCACC------------ATTTCCTAA i canFam3.chr18 C 0 I 11 s dasNov3.JH578441 1204679 144 + 1446996 tattca-----caggttctaaggattaggacataaaaacctttgtggtaccattagtttgc--ctaccaTGG-TTAAACAGAAGTCTATTTACCAATAGTTTGAAATACTCTTTA-TTCTTCTGGCTCCCACTATTTCCCAAAGGATTTTCCA- i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66745773 137 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=6392.000000 s hg38.chrUn_KI270749v1 61884 1 + 158759 G s panTro5.chr22 3548566 1 + 37823149 A i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526832 1 - 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41539 1 - 126596 A i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66745910 1 - 72422247 G i ponAbe2.chrUn I 137 I 299 s rheMac8.chr3 133475820 1 - 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67305505 1 + 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2787356 1 + 3123512 A i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2508038 1 + 10077455 A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713715 1 + 127223203 A i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180707 1 - 1799296 A i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757573 1 + 6934359 A i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760795 1 + 14340318 a i otoGar3.GL873564 I 10 C 0 s canFam3.chr18 51768953 1 - 55844845 A i canFam3.chr18 I 11 C 0 s dasNov3.JH578441 1204823 1 + 1446996 A i dasNov3.JH578441 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=168033.000000 s hg38.chrUn_KI270749v1 61885 31 + 158759 AATAATATGAATT----GTAGT---------AAA------------Gagaaagaaa s panTro5.chr22 3548567 31 + 37823149 AATAATAAGAATT----GTAGT---------AAA------------Gagaaacaaa i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526833 31 - 162613886 AATAATATGAATT----GTAGT---------Aaa------------gagaaagaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41540 31 - 126596 AATAATATGAATC----GTAGT---------aaa------------gagaaagaaa i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133475821 31 - 185818997 AATAATATGGATT----GTAGT---------aaa------------gagaaagaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67305506 31 + 192294377 AATAATATGGATT----GTAGT---------aaa------------gagaaagaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2787357 31 + 3123512 AATAATATGGATT----GTAGT---------aaa------------gagaaagaaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2508039 31 + 10077455 AATAATATGGATT----GTAGT---------AAA------------Gagaaagaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713716 31 + 127223203 AATAATATGGAAT----GTAGT---------AAA------------Gagaaagaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180708 31 - 1799296 AATAATATAGATT----GTAGT---------AAA------------Gagaaagaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757574 31 + 6934359 AATAATATGGATT----GTAGT---------Aaa------------gagaaagaag i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760796 40 + 14340318 aataatacaatta----gtcttttttttttaaaa------------aaaaaaaaaa i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768954 35 - 55844845 CATAATATAGATTAGTGGTAGA---------AAA------------Aagaaggtgg i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 1204824 43 + 1446996 AATGACAAAACTT----GTTTT---------AAAACAGATTGGACTGAGGAAGAAA i dasNov3.JH578441 C 0 N 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66745911 299 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=15293.000000 s hg38.chrUn_KI270749v1 61916 5 + 158759 gaaaa s panTro5.chr22 3548598 4 + 37823149 g-aaa i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526864 5 - 162613886 gaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41571 5 - 126596 gaaaa i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133475852 5 - 185818997 gaaaa i rheMac8.chr3 C 0 I 615 s macFas5.chr3 67305537 5 + 192294377 gaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2787388 5 + 3123512 gaaaa i macNem1.NW_012011522v1 C 0 I 631 s cerAty1.NW_012000909v1 2508070 5 + 10077455 gaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713747 5 + 127223203 gagaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180739 5 - 1799296 gaaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757605 5 + 6934359 gaaaa i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760836 4 + 14340318 GAAG- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768989 5 - 55844845 aggag i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66745911 299 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=7056.000000 s hg38.chrUn_KI270749v1 61921 7 + 158759 gaaaaca--- s panTro5.chr22 3548602 7 + 37823149 gaaagaa--- i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526869 7 - 162613886 gaaaaga--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41576 7 - 126596 gaaaaca--- i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 67305542 3 + 192294377 ----aga--- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2508075 7 + 10077455 agaaaaa--- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713752 7 + 127223203 agaaaga--- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180744 7 - 1799296 agaaaga--- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757610 7 + 6934359 agaaaga--- i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760840 7 + 14340318 GTAAACA--- i otoGar3.GL873564 C 0 N 0 s canFam3.chr18 51768994 7 - 55844845 ---gagatgg i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66745911 299 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=320937.000000 s hg38.chrUn_KI270749v1 61928 164 + 158759 aaga---------aaaagaaggaaggaaataaggaaggaagg----------------aaggaaataaag-acg--aaagaaaagaaggaggaaatgagagaagga------------ag-gaaaggagggagggagggaggaagggagaaaggcaggaag--ggag--aaaaaagaaagcatgaacacaagaaagaaagaaagaaag--a s panTro5.chr22 3548609 167 + 37823149 aag----------caaggaaagaaggaaggaaggaaggaagg----------------aaagaaagaaagaaag--aaagaaagaaagaaagaaagaaaaggagga------------aatgaaagaagaaaggaagggagggagggaggaaggcaagaag--ggag--aaaaaagaaagcaagaacacaagaaagaaagaaagaaagaaa i panTro5.chr22 C 0 C 0 s panPan2.chr7 108526876 168 - 162613886 aagaaagaaagagaaaagaaggaaggaaagaaggaaggaagg----------------aaggaaagaaag-aag--aaataaaagaaggaggaaatgagagaagga------------ag-----gaagggagggagggaggaagggagaaaggcaggaag--ggag--aaaaaagaaagcaagaacacaagaaagaaggaaagaaag--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41583 168 - 126596 aagaaaga-----aaaagaaggaaggaaagaaggaaggaagg----------------aaataaagaaag-aaa--gaagaaagaaagaaagaag-gaggaaatga------------gg-gaaggaagggagggagggaggaagggagaaaggcaggaag--ggag--aaaaaagaaagcatgaatacaagaaagaaag-aagaaggaaa i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 67305545 133 + 192294377 aaga------------------------------------------------------aaagaaagaaag-aaa--aaagaaaagaaggagaaaatgagagaagga------------aa-----gaagggagggaggaaggaagggagaaaagcaggaag--ggagaaaaaaaagaaagcaagaacaccagaaagcaagaaagcaaga-- i macFas5.chr3 C 0 I 30 s cerAty1.NW_012000909v1 2508082 132 + 10077455 aaga------------------------------------------------------aaagaaagaaag-aaa--aaagaaaagaaggagaaaatgagagaagga------------aa-----gaagggagggaggaaggaagggagaaaagcaggaag--ggag-aaaaaaagaaagcaagaacaccagaaagcaagaaagcaaga-- i cerAty1.NW_012000909v1 C 0 I 513 s chlSab2.chr21 5713759 193 + 127223203 aagaaag-------aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag-aaaagaaagaaagaaagGAGAAAATGAGAgaaggaaggaagagagggag-----gaagagagggaggaaggaagggagaaaagcaggaag--ggag-aaaaaaagaaagcaagaacaccagaaagcaagaaagcaaga-- i chlSab2.chr21 C 0 I 382 s manLeu1.NW_012105809v1 1180751 132 - 1799296 aaga------------------------------------------------------aaagaaagaaag-aaa--aaagaaaagaaggagaaaatgagagaagga------------aa-----gaagggagggaggaaggaagggagaaaagcaggaag--ggag-aaaaaaagaaagcaagaacaccagaaagcaagaaagcaaga-- i manLeu1.NW_012105809v1 C 0 I 441 s colAng1.NW_012115910v1 1757617 152 + 6934359 aagaaag------aaaaaaaagaaagaaagaagaaaagaag-----------------aaaggaagaaag-aaa--gaagaaaagaaggagaaaatgagagaagca------------ag-----gaagggaaggaggaaggaagggagaaaagcaggaag--ggag-aaaaaaagaaagcaagaacaccagaaagca------------- i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 51769001 159 - 55844845 -----------------agaggaggggaggaagaggaagagg----------------aagaagaggaggaaaa--gaagaaaaggagaagaagaagaaagaagaa------------ga-agaagaagaagaagaagaagaaaagaagaagaagaagaagaagaag--aagaagaagaagaagaagaagaagaagaagaagaagaaga-- i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66745911 299 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=616.000000 s hg38.chrUn_KI270749v1 62092 3 + 158759 -gaa s panTro5.chr22 3548776 3 + 37823149 -gaa i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000522v1 41751 3 - 126596 -gaa i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 67305708 3 + 192294377 -gaa i macFas5.chr3 I 30 C 0 s canFam3.chr18 51769160 3 - 55844845 aga- i canFam3.chr18 C 0 C 0 e rhiRox1.KN300005v1 672584 28899 - 4311341 I e ponAbe2.chrUn 66745911 299 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757769 0 + 6934359 C e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e nomLeu3.chr17 55776972 0 + 99891981 C e panPan2.chr7 108527044 0 - 162613886 C a score=2210.000000 s hg38.chrUn_KI270749v1 62095 2 + 158759 ag s panTro5.chr22 3548779 2 + 37823149 ag i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000522v1 41754 2 - 126596 ag i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 67305711 2 + 192294377 aa i macFas5.chr3 C 0 C 0 s rhiRox1.KN300005v1 701483 2 - 4311341 ag i rhiRox1.KN300005v1 I 28899 N 0 s canFam3.chr18 51769163 2 - 55844845 ag i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66745911 299 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757769 0 + 6934359 C e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e nomLeu3.chr17 55776972 0 + 99891981 C e panPan2.chr7 108527044 0 - 162613886 C a score=64370.000000 s hg38.chrUn_KI270749v1 62097 80 + 158759 aaag---------------------ggaaagagaaagaa---agaaaggaggaagggaggaaggaaaggaggaagagagaatcgtaaaaggga--ggaaggcaaag- s panTro5.chr22 3548781 101 + 37823149 aaagaaagaaagaaagaaagaaagaagaaagagagagaa---agaaaggaggaagagaggaaggaaaggaggaagagagaatggtaaaaggga--ggaaggcaaag- i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527044 60 - 162613886 --------------------------------------------aaaggaggaagggaggaaggaaaggaggaagagagaatggtaaaaggga--ggaatgcagag- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41756 95 - 126596 aaagaaagaaagaaagaga------gaagagagaaagaa---agaaaggaggaagggaggaaggaaaggaggaagagagaatggtaaaaggga--ggaaggcaaag- i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 67305713 89 + 192294377 -----------------aggggggaagggaaaaaaagtaaagagaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaaaaagggaaggaaggaagga- i macFas5.chr3 C 0 C 0 s colAng1.NW_012115910v1 1757769 70 + 6934359 -------------------------------agaaagca---agaagggaggaagggaggaaggagaggaggaagagagaatggaaaaagggg--ggaagggagag- i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 51769165 67 - 55844845 --------------------------------aagaaga---agaagaaagaagaggaggagg---aggaggaagaggaggaggaagaggagg--aggaggaggagA i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66745911 299 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=-4049.000000 s hg38.chrUn_KI270749v1 62177 4 + 158759 -aaa--c s panTro5.chr22 3548882 4 + 37823149 -aaa--t i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527104 4 - 162613886 -aaa--c i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41851 4 - 126596 -aaa--c i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66746210 4 - 72422247 -AAA--C i ponAbe2.chrUn I 299 I 102 s macFas5.chr3 67305802 3 + 192294377 -aaa--- i macFas5.chr3 C 0 C 0 s colAng1.NW_012115910v1 1757839 5 + 6934359 -aaaat- i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 51769232 4 - 55844845 TGAC--- i canFam3.chr18 C 0 C 0 e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=1910.000000 s hg38.chrUn_KI270749v1 62181 3 + 158759 aaa s panTro5.chr22 3548886 3 + 37823149 aaa i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527108 3 - 162613886 caa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41855 3 - 126596 aaa i gorGor5.CYUI01000522v1 C 0 C 0 s canFam3.chr18 51769236 3 - 55844845 AAA i canFam3.chr18 C 0 I 2841 e ponAbe2.chrUn 66746214 102 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757844 0 + 6934359 C e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67305805 0 + 192294377 C e nomLeu3.chr17 55776972 0 + 99891981 C a score=72187.000000 s hg38.chrUn_KI270749v1 62184 85 + 158759 gaaaataaagagg--------------------ggaaggaaggaaaaa-gaggaaaggaag-gagggaggaaggaagaaaaggagggcgggaggaagggagaaaaaa---- s panTro5.chr22 3548889 103 + 37823149 gaaaataaagaggaaaaggaaggaagtaaggaaggaagaaaggaaaaaggaggaaaggaagtgagggaggaaggaagaaaagga----aagaggaagggagaaaaaa---- i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527111 91 - 162613886 gaaaataaagagg----------------agaaggaaggacggtaaagggaggaaaggaagggtgggaggaaggaagaaaaggagggagggaggaagggagaaaaaa---- i panPan2.chr7 C 0 I 1 s gorGor5.CYUI01000522v1 41858 88 - 126596 gaaaataaagagg----------------caaaggaaggaaggaaaa--gaggaaaggaagggagggagcaaggaagaaaatga-ggcgggaggaagggagaaaaaa---- i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 67305805 83 + 192294377 ------aagggaa----------------ggaaggaaggaaggaagaa--aggaaaggaagggagggaagaaggaagaaaagga----gggaggaagggagaaagaaaaaa i macFas5.chr3 C 0 C 0 s colAng1.NW_012115910v1 1757844 91 + 6934359 aaagagaaggaaa----------------ggaaggaaggaacaaaaaaggaggaaaggaagggagggaagaaggaagaaaagga----gggaggaagggagaaagaaaaag i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chrUn 66746214 102 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e nomLeu3.chr17 55776972 0 + 99891981 C a score=2100.000000 s hg38.chrUn_KI270749v1 62269 1 + 158759 g s panPan2.chr7 108527203 1 - 162613886 g i panPan2.chr7 I 1 C 0 s gorGor5.CYUI01000522v1 41946 1 - 126596 g i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66746316 1 - 72422247 g i ponAbe2.chrUn I 102 I 60 s nomLeu3.chr17 55776972 1 + 99891981 g i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67305888 1 + 192294377 g i macFas5.chr3 C 0 C 0 s colAng1.NW_012115910v1 1757935 1 + 6934359 g i colAng1.NW_012115910v1 C 0 C 0 e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e panTro5.chr22 3548992 0 + 37823149 C a score=28326.000000 s hg38.chrUn_KI270749v1 62270 15 + 158759 gaaagaaagcaagaa s panTro5.chr22 3548992 15 + 37823149 gaaagaaagcaagaa i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527204 15 - 162613886 gaaagaaagcaagaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41947 15 - 126596 gaaagaaagcaagaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55776973 15 + 99891981 gaaagaaagaaagaa i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67305889 15 + 192294377 gaaagaaagcaagaa i macFas5.chr3 C 0 C 0 s colAng1.NW_012115910v1 1757936 15 + 6934359 gaaagaaagcaagaa i colAng1.NW_012115910v1 C 0 I 268 e ponAbe2.chrUn 66746317 60 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=18168.000000 s hg38.chrUn_KI270749v1 62285 45 + 158759 cgtgaga---aagaaagaaataatactagaaaagaaggaagaa---aaggg- s panTro5.chr22 3549007 44 + 37823149 agtgaga---aagaaag----aataagagaaaagaaggaagaaaagaaggg- i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527219 32 - 162613886 attgaga---aagaaag----aataaaagaaaag------------aaggg- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 41962 44 - 126596 cgtgagaaagaagaaag----aatatgagaaaagaaggaagaa---aatgg- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55776988 40 + 99891981 agagaaa---gagagag----agagagagaaagggagggagaa---aggg-- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67305904 42 + 192294377 agtggga---aagaatg----aaggaaagaaaaagaagaaaga---aaagga i macFas5.chr3 C 0 C 0 e ponAbe2.chrUn 66746317 60 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=700.000000 s hg38.chrUn_KI270749v1 62330 1 + 158759 a s panTro5.chr22 3549051 1 + 37823149 a i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527251 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42006 1 - 126596 a i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66746377 1 - 72422247 g i ponAbe2.chrUn I 60 I 66 s nomLeu3.chr17 55777028 1 + 99891981 a i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67305946 1 + 192294377 g i macFas5.chr3 C 0 C 0 e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=22841.000000 s hg38.chrUn_KI270749v1 62331 28 + 158759 gggagaaaggaagggagggacgagggaa s panTro5.chr22 3549052 28 + 37823149 gggagaaaggaagggagggataaaggaa i panTro5.chr22 C 0 I 28 s panPan2.chr7 108527252 21 - 162613886 gggagaaaggaagggagggaa------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42007 27 - 126596 gggagaaaggaagggagggaggaggga- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55777029 28 + 99891981 ggcagaaaggaagggagggataagggaa i nomLeu3.chr17 C 0 I 8 s macFas5.chr3 67305947 28 + 192294377 aaaatgaaggaagggagggagggaggaa i macFas5.chr3 C 0 C 0 e ponAbe2.chrUn 66746378 66 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=13439.000000 s hg38.chrUn_KI270749v1 62359 31 + 158759 ggaagaataaggta--aagaaagaaagaaggaa s panPan2.chr7 108527273 27 - 162613886 ggaaga--aagg----aagaaaagaggaaagaa i panPan2.chr7 C 0 I 1 s gorGor5.CYUI01000522v1 42034 31 - 126596 ggaagaataaggga--aagaaagaaagaaggaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55777065 28 + 99891981 ggaagaataag-----aggaaagaaggaaggaa i nomLeu3.chr17 I 8 C 0 s macFas5.chr3 67305975 31 + 192294377 --aagagaaaggcaggaagggagaaaaaaagaa i macFas5.chr3 C 0 C 0 e ponAbe2.chrUn 66746378 66 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e panTro5.chr22 3549080 28 + 37823149 I a score=7051.000000 s hg38.chrUn_KI270749v1 62390 10 + 158759 agaaggaagg----- s panTro5.chr22 3549108 10 + 37823149 agaaagaaag----- i panTro5.chr22 I 28 C 0 s panPan2.chr7 108527301 10 - 162613886 agaaagaagg----- i panPan2.chr7 I 1 C 0 s gorGor5.CYUI01000522v1 42065 10 - 126596 agaaggaagg----- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55777093 10 + 99891981 agaaggaagg----- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67306006 15 + 192294377 agcaagaacaccaga i macFas5.chr3 C 0 C 0 e ponAbe2.chrUn 66746378 66 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=5196.000000 s hg38.chrUn_KI270749v1 62400 3 + 158759 aag s panTro5.chr22 3549118 3 + 37823149 aag i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527311 3 - 162613886 aag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42075 3 - 126596 aag i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66746444 2 - 72422247 -ag i ponAbe2.chrUn I 66 C 0 s nomLeu3.chr17 55777103 3 + 99891981 aag i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67306021 3 + 192294377 aag i macFas5.chr3 C 0 I 1 e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=845.000000 s hg38.chrUn_KI270749v1 62403 1 + 158759 g s panTro5.chr22 3549121 1 + 37823149 g i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527314 1 - 162613886 g i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42078 1 - 126596 g i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66746446 1 - 72422247 a i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 55777106 1 + 99891981 g i nomLeu3.chr17 C 0 C 0 e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306024 1 + 192294377 I a score=418.000000 s hg38.chrUn_KI270749v1 62404 3 + 158759 -aaa s panPan2.chr7 108527315 3 - 162613886 -aga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42079 3 - 126596 -aga i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66746447 2 - 72422247 -aa- i ponAbe2.chrUn C 0 I 29 s nomLeu3.chr17 55777107 3 + 99891981 -aga i nomLeu3.chr17 C 0 I 9 s macFas5.chr3 67306025 4 + 192294377 aaga i macFas5.chr3 I 1 C 0 e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e panTro5.chr22 3549122 0 + 37823149 C a score=726.000000 s hg38.chrUn_KI270749v1 62407 2 + 158759 aa s panPan2.chr7 108527318 2 - 162613886 aa i panPan2.chr7 C 0 C 0 s nomLeu3.chr17 55777119 2 + 99891981 ga i nomLeu3.chr17 I 9 C 0 s macFas5.chr3 67306029 2 + 192294377 aa i macFas5.chr3 C 0 I 2 e ponAbe2.chrUn 66746449 29 - 72422247 I e gorGor5.CYUI01000522v1 42082 0 - 126596 C e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e panTro5.chr22 3549122 0 + 37823149 C a score=1820.000000 s hg38.chrUn_KI270749v1 62409 2 + 158759 aa s panTro5.chr22 3549122 2 + 37823149 aa i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527320 2 - 162613886 aa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42082 2 - 126596 aa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55777121 2 + 99891981 aa i nomLeu3.chr17 C 0 C 0 e ponAbe2.chrUn 66746449 29 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306031 2 + 192294377 I a score=27356.000000 s hg38.chrUn_KI270749v1 62411 30 + 158759 agaaagaaaagaaagaaaggaaaagaaaaa s panTro5.chr22 3549124 30 + 37823149 agagaaaaaagaaagaaaggaaaagagaaa i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527322 30 - 162613886 agaaaagagaaaaagaaaaagaaagaaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42084 30 - 126596 aagaaagaaaagaagaaaggaaaagaaaaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55777123 30 + 99891981 agaagagaaagaaagaaaagaaaagaaaag i nomLeu3.chr17 C 0 I 5 s macFas5.chr3 67306033 30 + 192294377 aagaaagaaagaaagaagggaggaaggaag i macFas5.chr3 I 2 C 0 e ponAbe2.chrUn 66746449 29 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=474.000000 s hg38.chrUn_KI270749v1 62441 1 + 158759 a s panTro5.chr22 3549154 1 + 37823149 a i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527352 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42114 1 - 126596 g i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66746478 1 - 72422247 g i ponAbe2.chrUn I 29 I 60 s nomLeu3.chr17 55777158 1 + 99891981 a i nomLeu3.chr17 I 5 I 7 s macFas5.chr3 67306063 1 + 192294377 g i macFas5.chr3 C 0 C 0 e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=50188.000000 s hg38.chrUn_KI270749v1 62442 60 + 158759 gaaaataaaaggaagaggaaaagaagaaaggaaggaagaaggcaagggaagggaagagaa s panTro5.chr22 3549155 54 + 37823149 g-----aaaagaaagaggaaaagaagaaaggaaggaa-aaggcaagggaagggaagagaa i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527353 60 - 162613886 gaacagaaaagaaagagaaaaagaagaaaggaaggaagaaggcaagggaagggaagagaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42115 57 - 126596 aaaa--gaaaggaagaggaaaagaagaaaggaaggaagaaggcaagggaa-ggaagagaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55777166 60 + 99891981 gaaaggaaaagaaagaagaaaagaagaaaggagggaagaaggcaagggaagggaagagaa i nomLeu3.chr17 I 7 C 0 s macFas5.chr3 67306064 52 + 192294377 -------aaggaaaggaggaagagagaatggaaaaaggaagggaaagaaa-gaaagtaaa i macFas5.chr3 C 0 C 0 e ponAbe2.chrUn 66746479 60 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=4206.000000 s hg38.chrUn_KI270749v1 62502 3 + 158759 gag s panTro5.chr22 3549209 3 + 37823149 gag i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527413 3 - 162613886 cag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42172 2 - 126596 -ag i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66746539 3 - 72422247 gag i ponAbe2.chrUn I 60 I 79 s nomLeu3.chr17 55777226 3 + 99891981 gag i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67306116 3 + 192294377 gag i macFas5.chr3 C 0 C 0 e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=34740.000000 s hg38.chrUn_KI270749v1 62505 27 + 158759 aaaggaagatggaaagaaggaaggaaG s panTro5.chr22 3549212 27 + 37823149 aaaggaagatggaaagaaggaaggaag i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527416 27 - 162613886 aaaggaagatggaaagaaggaaggaag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42174 27 - 126596 aaaggaagatggaaagaaggaaggaag i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55777229 27 + 99891981 aaaggaagatggaaagaaggaaggaaG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67306119 27 + 192294377 aaggaaggaaggaaagaaggaaagaag i macFas5.chr3 C 0 I 5 e ponAbe2.chrUn 66746542 79 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=40293.000000 s hg38.chrUn_KI270749v1 62532 48 + 158759 ACCGCAAATATTAGAAATTCTGGGTTTGTTAGAGAATATGTCAAACTG s panTro5.chr22 3549239 48 + 37823149 aacgcaaatattagaaaTTCTGGGTTTGTTAGAGAATATGCCATACTG i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527443 48 - 162613886 ACCGCAAATATTAGAAATTCTGGGTTTGTTAGAGAATATGCCATACTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42201 48 - 126596 AACGCAAATATTAGAAATTCTGGGTTTGTTAGAGAATATGCCATACTT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55777256 48 + 99891981 ACGGCAAATATTAGAAATTCTGGGTTTGTTAGAGAATACGCCATACTG i nomLeu3.chr17 C 0 C 0 e ponAbe2.chrUn 66746542 79 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=729.000000 s hg38.chrUn_KI270749v1 62580 2 + 158759 TT s panPan2.chr7 108527491 1 - 162613886 -T i panPan2.chr7 C 0 C 0 s ponAbe2.chrUn 66746621 2 - 72422247 TT i ponAbe2.chrUn I 79 I 752 s nomLeu3.chr17 55777304 2 + 99891981 TT i nomLeu3.chr17 C 0 C 0 e gorGor5.CYUI01000522v1 42249 0 - 126596 C e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I e panTro5.chr22 3549287 0 + 37823149 C a score=618256.000000 s hg38.chrUn_KI270749v1 62582 752 + 158759 TTTTTTTTTCACTTGAAAGGAAAGAGTATCTGCCATTGAAgattggatgtcttgttggtgatattgttgttcttatcttccacatgattactgagtttgtgcctagtctttccattactaagacaaaagtgttgaagtctgcaaatataattttggatttttctagttcacctttgatttctttcatgtttttcctcatgtatttggaggttctgttgttagctgcataccctaattagtaggatgtttacatcttcttgagaattgatgattatattatctattatctctcatctctgatactatttcttgttctgaactctgttgtgtctaatatcaacgtagtccatccacagctttattttagtgtttcc-atgatatggcattctccataccttgatgataacctatttatatctctatatatttggagCACGGTATAAAATTTAGACTTGATTTTT-AAAGAG-TTTTCAAGATGTAATTCTTATTTATTtttgttctatttgacattctctgagtttcctatatctgaagtttgattttctgtcac-ttcttttagaatatttttggcagttgttttgaaaaatatttctttggctccattattttttcctcttttctttttgggatttcaatcataACTAGAGTAGGTAATTTCATCTCAGTCTTATGCAGGTACTTTTTCTCAAGGTCTTAGGAATGTAGCCTTCTCACACTTCTGTT-CTTTTCCTGGCTGTGTTGGTGAACTCAGT s panTro5.chr22 3549287 746 + 37823149 TTTTTTTTTCCCTTGAAAGGAAAGAGTATCTGCCATTGAAgattggatgtcttgttggtgatattgttgttcttatcttccatatgattactgagtttgtgcctagtctgtccattactaagacaaaagtgttgaagtctgcaaatataattttggattttcctagttcacctttgatttctttcctgttttacctcatgtatttggaggttctgttgttagctgcataccctaattagtaggatgtttaca---tcttgagaattcattattatattatttattatctctcatctctgatactatttcttgttccgaactctgttgtgtctaatatcaatgtagtccttccacaactttattttagtgtttcc-atgatatggctttctccgtatcttgatgataacctatttatatctctatatatttggagcaagATATAAAATTTAGAGTTGATTTTTAAAAGAT-TTTTCAAGATGGAATTCTTATTTATTTTTGTTCTATTTGACATTCTCTGAGTTTCCTATATCTGAAGT----TTTTCTGTCAC-TTCTTTTAGAATATTTTTGGCAGTTATTTTGAAATACATTTCTTTTGCTCCATTATTTTTTGCTCTTTTCTTTTTGGGATTTCAATTATAACTAAGGTAGGTAATTTCATCTCAGTCTTATGCAGGTACTTTTTCTCAGGGTCTCAGGAATGTAGCCTTCTCACACTTCTGTT-CTTTTCCTGGCTGTGTTGGTGAGCTCAGT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108527492 753 - 162613886 TTTTTTTTTCACTTGAAAGGAAAGAGTATCTGCCATTGAAgattggatgtcttgttggtgatattgttgttcttgtcttctatacgattactgagtttgtgcctagtctgtccattactaagacaaaagtgttgaagtctgcaaatataattttggatttttctagatcacctttgatttatttcatgatttacctcatgtatttggaggttctgttgtaagctgcataccctaattagcaggatgtttacatcatcttgagaattgattattatattatatattatctctcatctctgataatatttcttgttctgaactctgttgtgtctaatatcaatgtagtccttccacagctttattttagtgtttcc-atgatatggctttctccataccttgattataacctatttatatctctatatatttggagcaagATATAAAATTAAGAGTTGATTTTTTAAAGATATTTTCAAGATGTAATTCTTATTTATTtttgttctatttgacattctctgagtttcctatatctgaagtttgattttctgtcac-ttcttttagaatatttttgacagttattttgaaaaatatttcttctcttccattattttttcctc--ttctttttgggatttcagttataACTAGGGTAGGTAATTTCATCTCAGTCTTATGCAGGTACTTTTTCTCAAGGTCTCAGGAATATAGCCTTCTCACACTTCTGTTCCTTTTCCTGGCTGTGTTGGTGAGCTCAGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42249 748 - 126596 TTTTTTTTTCACTTGAAAGGAAAGAGTATCTGCCATTGAAgattggatgtcttgttggtgatattgttgttcttatcttccacatgattactgagtttgtgcttagtctttccattactaagacaaaagtgttgaagtctgcaaatataatttt-gatttttctagttcacctttgatttctttcctgttttacctcatgtatttggaggttctgttgttagctacataccctaattagtaggatgtttacatcttcttgagaattgattattctattatctattatctctcatctctgatactatttcttgctccgaactctgttgtgtctaatatcaatgtagtccttccac-gccttattttagtgtttcctatgatatggctttctccatatcttgatgataacctatttatatctctatatatttggagCTAGATATAAAATTTAGACTTGATTTTTTAAAGAT-TTTTC-AGATGTAATTCTTATTTCTTTTTGTTCTATTTGACATTCTCTGAGTTTCCT-TATTTGAAGTTTGATTTTCTGTCA--TTCTTTTAGAATATTTTTGACAGTTATTTTGAAAAATATTTCTTTTGCTCCATTGTTTTTCCCTCTTTTCTTTTTGGGATTTCAATCATAACTAGAGTAGGTAATTTCATCTCAGTCTT-TGCAGGTACTTTTTCTCAGGGTCTCAGGAATGTAGCCTTCTCTCACTTCTGTT-CTTTTCCTGGCTGTGTTGGTGAGCTCAGT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55777306 752 + 99891981 -TTTTTTTTCACTTGAAAGGAAAGAGTATCTGCCATTGAAgattggatgtcttgttggtgatattgttgttcttatcttctatatgattactgagtttgtgcctagtctgtccattactaagacaaaagtgttgaagtctgcaaatataattttggatttttctagttcacctttgatttctttcatgttttacctcatgtatttggaagttccgttgttagctgcatactctaattagtagggtgtttacatcttcttgagaattgattattatattatatattatctctcatctctgataatatttcttgttctgaactctgttgtgtctaatatcaatgtagtctttccacagctttatttcagtgtttcc-atgatatggctttctccataccttgattataacctatttatatctctatatatttggagcaagATATAACATTTAGAGTTGATtttttaaagatattttcaagatgtaattcttatctatttttgttctatttgacattctctgagtttcctgtatctgaagtttgattttctgtcacttttttttataatatttttgacagttattttaaaaaatatttcttctgctccattattttttcctc--ttctttttgggatttcagttgtaactagggtaggtaatttcatctcagtctcatGCGGGTACTTTTTCTCAGGGTCTCAGGAATGTAGCCTTCTCACACTTCTGTT-CCTTTCCTGGCTGTGTTGGTGAGCTCAGT i nomLeu3.chr17 C 0 C 0 e ponAbe2.chrUn 66746623 752 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=1500.000000 s hg38.chrUn_KI270749v1 63334 1 + 158759 G s panTro5.chr22 3550033 1 + 37823149 G i panTro5.chr22 C 0 C 0 s panPan2.chr7 108528245 1 - 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42997 1 - 126596 G i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 66747375 1 - 72422247 G i ponAbe2.chrUn I 752 I 1904 s nomLeu3.chr17 55778058 1 + 99891981 G i nomLeu3.chr17 C 0 C 0 e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=123375.000000 s hg38.chrUn_KI270749v1 63335 150 + 158759 ATATTCCTCCTTCA-CTTCAAGAGCAGTTTTGTT-----TTGTTTTTCCTGTTTTCATACTGCCAGCATCGGGAGTATTCTAAGTGTGGCAGTTTTTGTTGCCTTCCCCTACATATTAAGTGGAAtatcttggtctatttggactcttataacaaa s panTro5.chr22 3550034 151 + 37823149 ATATTCCTCTTTCACCTTCAAGAGCAGTTTTGTT-----TTGTTTTTCCTGTTTTCATACTCCCAGCATCAGGAGTATTCTAAGTGTGGCAGTTTTTGTTGCCTTCCCCTATATATTAAGTGGAAtatcttggtctatttggactcttataacaaa i panTro5.chr22 C 0 C 0 s panPan2.chr7 108528246 156 - 162613886 ATATTCCTCCTTCACCTTCAAGAGTAgttttgttttgtcttgtttttcctgttttCATACTCCCAGCATCAGAAGTATTCTAAGTGTTGCAGTTTTTGTTGCCTTCCCCTACATATTAAGTGGAAtatctaggtctatttggactcttataacaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 42998 148 - 126596 ATATTCCTCCTTCACCTTCAAGAGCAGTTTTGTT-----TTGTTTTTCCTGTTTTCATACTCCCA-CATCAGGAGTATTCT-AGTGTGGCAGTTTTTGTTGCCTTCCCCTACATATTAAGTGGAAT-tcttgctctatttggactcttataacaaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 55778059 156 + 99891981 ATGTTCCTCCTTCACCTTCAGGAGTAgttttgttttgttttgtttttcctgttttCATACTCCCAGCATCAGGAGTATTCTAAGTGTGGCAGTTTTTGTTGCCTTCCCCTACATATTAAGTGGAAtgtcttggtctatttggactcttataacaaa i nomLeu3.chr17 C 0 C 0 e ponAbe2.chrUn 66747376 1904 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1897855 217 - 9267652 I e cebCap1.NW_016107540v1 1395958 217 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 736534 214 - 18371965 I e calJac3.chr8 108119180 215 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=1276684.000000 s hg38.chrUn_KI270749v1 63485 485 + 158759 ataacataaaccgggtgactaaaaaacaacagatatttcttttttcacacttcttgaggctgtaagatctcaggtcaagatgctcacaaattcagtgttg-atgagagcccatttcatggttcatagatggtgccttctttctatgtcctcacatagtggaagacacacaagaactccattgagc--------------------------------------tattttataaaggcactaatcccattcataagggctcgg-cccccaagacctggtcacctcccaagtgttctgctctccCTGATCTGTGTCATATACAGACTCTCTTGGATTCCTTACCAATTGCTTGAGAGATCGCAGTGGGTTTGTGGGGAAAAAGTTTTCAAGATGATGGATCTTTCCAAACTTCTGCAGCTGTCAGCGGTCTCCCAATCTCACCAGCCCCACTTTGTCTTTAGGAATTTATTGATTATTCCAGCTTTACTTGTCATAGTGG----TATTTGCATCTGTCCTATGTAAGTGCA s panTro5.chr22 3550185 490 + 37823149 ataacataaactgggtgactaaaaaacaacagatatttcttttttcacacttcttgaggctgtaagatctcaggtcaagatgctcacaaattcagtgttg-atgagagccaatttcatggttcatagatggtgccttctttctatatcctcacatagtagaaggcacacaagaactccattgagct-------------------------------------tcttttataaaggcactaatcccattcacaagggctcgg-cccccaagacctggtcacctcccaaGTGTTCTGCTCTCCCTGATCTGTGTCATATACAGACTCTCTTGGATTCCTTACCAATTGCTTGAGAGATCACAGTGGGTTTGTGGGGAAAAAGTTTTCAAGATGATGGATCTTTCCCAACTTCTGCAGCTGTCAGCGGTCTCCCAATCTCACCAGCCCCACTTTGTCTTTAGGAATTTATTGATTATTCCAGCTTTGCTTGTCATAGTGGTGTCTATTTGCATCTGTCCTATGTAAGTGCA i panTro5.chr22 C 0 C 0 s panPan2.chr7 108528402 490 - 162613886 ataacataaactgggtgactaaaaaacaacagatactccttttttttcacttcttgaggctgtaagatctcaggtcaagatgctcacaaattcagtgttg-atgacagcccatttcatggtgcataaatggtgccttctttctatgtcctcacatagtggaaggcacactagaactccattgagct-------------------------------------tcttttataaaggcactaatcccattcataagggctcag-cccccatgacctggtcacctcccCAGTGTTCTGCTCTCCCTGAACTGTATCATATACAGACTGTCTTGGAGTCCTTACCAATTGCTTGAGAGATCCCAGTGGGTTTGTGGGGAAAAAGTTTTCAAGATGGTGGATCTTTCCCAACTTCTGCAGCTGTCAGTGGTTTCCCAATCTGACCAGCCCCACTTTGTCTTTAGGAATTTATTGATTATTCCAGCTTTACTTGTCATAGTGGTGTCTATTTGCATCTGTCTTATGTAAGTGCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 43146 483 - 126596 ataacataaactgggtgactgaaaaacaacagatatttcttttttcacacttcttgaggctgtaagatctcaggtcaagatgctcacaaatccagtgttg-atgagagcccatttcatggttcatagatggtgccttctttctatgt-ctcacatagtggaaggcacacaagaactacattgagct-------------------------------------tcttttataaaggcactaatcccattcataagggctc-g-cccccaagacctggtcacctcccaagtgttctgctctccc-gatCTGTGTCATATACAGACTCTCTTGGATTCCTTACCAATTGCTTGAGAG-TCGCAGTGGGTTTGTGGGG-AAAAGTTTTCAAGATGATGGATCTTTCCCAAC-TCTGCAGCTGTCAGTGGTCTCCCAATCTCACCAGTCCCACTTTGTCTTTAGGAATTTATTGATTATTCCAGCTTTA-TTGTCATAGTGGTGTCTATTTGCATCTGTCCTATGTAAGTGCA i gorGor5.CYUI01000522v1 C 0 n 0 s nomLeu3.chr17 55778215 483 + 99891981 ataacataaactgagtgactaaaaaacaacagatatttctttttttccacttcctgaggctgtaagatctcaggtcaggatgctcacaaattcagtgttg-atgacagcccatttcatggttcataaatggtgccttgtttctatgtcctcacatagtggaaggcacactagaactccactgagct-------------------------------------tcttttataaaggcactaatcccattcataacggctcag-cccccatgacctggtcacctccccagtgttctgctctcctTGATCTGTATCATATACAGACTCTCTTGGATTCCTTACCAATTGCTTGAGAGATCCCAGTGGGTTTGTGGGGAAAAAGTTTTCAAAATGG-------TTTTCAACTTCTGCAGCTGTCAGCGGTCTCCCAATCTGACCAGCCCCATTTTGTCTTTAGGAATTTATTGATTATTCCAGCTTTACTTGTCATAGTGGTGTCTATCTGCATCTGTCTTATGTAAGTGCA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108119395 512 - 128169293 ataatataaactagctaactaaaaaaccacagatatttctttttt-acacttcttgcggctgtaaagtctcagatcaagatgcccacaagttcagagtttcacaagagcccatttcatggttcatagacggtgccttctttctatgtcctcacatagtggaggacacacgagaactccactgggct--tctttatggaaggcatacaagaattgcattgggcttctttcataaagacactaatctcattcataagggcttgcgcccccaagacccagtcatttcccCAGTGTTCTGCTGTCCCTGATCTGTATCATATACAGACTCTCTTGGAGTACTTATCAATTGTTTGAGAGATCCCAATGGGTATGTGGGGAAAAAGTTTTCAAGATGGTAGATCTTTCCCAATTTCTGCAGCTGTCAGTG-------------ACCAGCACCACCTTGCCTTTAGGAATTAATTGATTATTTCGGCTTTA-TTGTAATAGTGGTATCTGTTTGCATCTGTCCTATGTAAAGGCA i calJac3.chr8 I 215 C 0 s saiBol1.JH378145 736748 510 - 18371965 ataatataaactggctgactaaaaaaagacagatatttctatttt-acacttcttgcagctgcaaagtctcagatcaagatgcccacaagttcggagttttacgagagcccatttcatggttcatagatggtgccttctttgtatgtcctcacatagtggagggcacacaagaactccactgggct--tctttatggaaggcacacaagaactcaattgggcttctttcataaagacactaatctcattcataagggcttgt-cccccaagacctggtcatttccc--GTGTTCTGCTGTCCCTGATCTATATCATATACAGACACTCTTGGCATACTTATCAATTGTTTGAGAGACCCCAATGGGTTTGTGGGGAAAAAGTTTTCAAGATGGTGGATCTTTCCCAACTTCTGCAGCTGTCAGTG-------------ACCAGCACCACCTTGCCATTAAGAATGTATTGATTATTTCAGCTTTACTTGTCATAGTGGTATCTATTTGCATCTGTCCTATGTAAAGGCA i saiBol1.JH378145 I 214 C 0 s cebCap1.NW_016107540v1 1396175 508 + 3566421 ataatataaactggctgactaacaaaccacagatatttctttttt-acacttcttgcggctgtaaagtctcagatcaagatgcccacaagttcagagtttcacaagagcccatttcatggttgatagatgatgccttctttctatgtcctcacatagtggagggcacacgagaactccactgggct--tctttatggaaggcacacaagaactccattgggcttctttcataaagacaacaatcccattcataacggcttgc-ccctcaagacctggtcatttccCCAGTGTTCTGCTGTCCCTGATCTGTATCATATACAGACCCTCTTGGTGTACT----AATTGTTTGAGAGACCCCAGTGGGTTTGTGGGGAAAAACTTTTCAAGATGGTGGATCTTTCCCAACTTCTGCAGCTGTCAGTG-------------ACCAGCACCACCTTGCCTTTAGGAATTTATTGATTATTTCAGCTTTACTTGTCATAGTGGTATCTATTTGCATCTGTCCTATGTAAAGACA i cebCap1.NW_016107540v1 I 217 C 0 s aotNan1.NW_018514471v1 1898072 512 - 9267652 ataatataaactggctgattaaaaaatgacagatatttctttttt-acacttctcatggctgtaaagtctcagatcaagatgcccacaagttcagagtttcacgagagcccatttcatggttcatagatagtgccttctttctatgtcctcacataggggagggcacatgagaactccactgggcttctt--tatggaaggcacacaagaactccattgggcttctttcataaagacactaatcccattcataagggcttgc-tccccaagacctggtcatttcccCAGTGTTCTGCTGTCCCTGATCTGTATCATATACAGACTCTCTTGGCATACTTATCAATTGTTTGAGAGACTCCAATGGGTTTGTGGGGAAAAAGTTTTCAAGATGGTGGATCTTTCCCAACTTCTGCAGCTGACAGTG-------------ACCAGCACCACCTTGCCTTTAGGAATTTATTGATTATTTCAGCTTTACTTGTCATAGTGGTATCTATTTGCATCTGTCCTATGTAAAGGCA i aotNan1.NW_018514471v1 I 217 C 0 e ponAbe2.chrUn 66747376 1904 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=42390.000000 s hg38.chrUn_KI270749v1 63970 19 + 158759 TCTGTCCTCTTTCTCCTTG s panTro5.chr22 3550675 19 + 37823149 TCTGTCCTTTTTCTCCTTG i panTro5.chr22 C 0 N 0 s panPan2.chr7 108528892 18 - 162613886 TCCGTCCTCTTTCTCTTG- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 138101 19 + 150013 tctgtcctctttctccttg i gorGor5.CYUI01000341v1 n 0 C 0 s nomLeu3.chr17 55778698 19 + 99891981 TCTGTCCTCTTTCTCCTTG i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108119907 19 - 128169293 TTCATCCTTTTACTCTTTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 737258 19 - 18371965 TTTACCCTTTTTCTCTTTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1396683 19 + 3566421 TTCATCCTTTTTCTCTTTG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1898584 19 - 9267652 TTCATCCTTTTTCTTTTTG i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66747376 1904 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=904530.000000 s hg38.chrUn_KI270749v1 63989 506 + 158759 AAGTTGCTTGTTTTCCCTCATATTTTGACTCAGTTCTTGGCAACCTGGTTGCTATAAAAATAAAGTCATGACTTTGAAGTTAGTTTGGTTCTTCCATTGTTGTCAGGTTAGGAACCCTATTCCATCCCAGATCACCAAAACCCAGAGGTTTTTGAGGGTTGAaattttaggctttctctttgaattgtagttttatcttctttcagttaccatttgcattttcataatgattaatgagactaag--atttttt-tgtgtagttgactgtacctttggattttttt-cccaaatcccttttcatttcttATTTTCTTTGTGGTTTTAGAAAATGTAGTTTACATAATTGCAGTTTG---A-TTTTTTACTCA---------------GTTAATGGCATGCTTAATGGAGAGAAAAAATATT----AAATATATTTCCCTTTTTAATTACTGTGCTTTTTTCTTTTTTAAGGAAATGTTTCATTATGTTAAA-TTTCAGTGTTATTCTACTTAGCTATTCCTTAAATATTATAGTA s panPan2.chr7 108528910 510 - 162613886 CAGGTGCTTATTTTCCCTTACATTTTGACTCAGTTCTTGGCAACCTGGTTGCTATAAAAATAAAGTCATGACTTTGAAGTTAGTTTTGTTCTTTCATTGTTGTAAGGTTAGGAGCCCTATTCCttcccagctctccaaaacccagaattttttttggtttgaaattttagcctttctctttgaattgtagttttatcttattccagttacaatttgcattttcctaatgattaatgagactaag--cttttttgtgtgtagttgactgtacctttggattttttt-cccaaatcccttttcaTTTCATATTTTCTTTATGATTTTAGAAAATGTAGTTTATAT-ATTGCAGCTTG---A-TTTTTTACTCA---------------GTTAATGGCATGCTTAATGGAGAGAAAAAATATTAATGAACTATATTTCCCTTTTTAATTACTGTGTTTTTTTCTTTTTTAAGGAAATATTTCATTATGCTAAA-TTTTAGTGTTATTCTACTTAGCTATTCCTTAAATAttatagta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 138120 502 + 150013 caggtgcttgttttccctcacattttgactcagttcttggcaacctggttgctataaaaataaactcatgactttgaagttagttgggttctttcattgttgtaaggttaggagccctattcAATCCCAGCTCTCCAAAACCCAGAATTTTTGGGGGGTTGAAATTTTAGGCTTTCTCTTTGAATTGTAGTTTTATCCTATTTCAGTTACAATTTTCATTTTCATAATGATTAATGACGCTAAG--CTTTTTT-TGTGTAGTTGACTCTAACTTTGGATTTTTTT-CCCAAATCCCTTTTCACTTC---TTTTCTTTATGGTTTTAGAAAATGTAATTTACATAATTGCAGCTTG---A-TTTTTTACTCA---------------GTTAATGGCATGCTTAATGGAGAGAAAAAATATT----AACTATATTTCCC-CTTTAATTACTGTGCTTTTTTCTTTTTTAAGGAAATATTTCATTATGTTAAA-TTTTAGTGTTATTCTATTTAGCTATTCCTTAAATATTATAGTA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55778717 507 + 99891981 CAGGTGCTTATTTTCCCTCACATTTTGACTCAGTTCGTGGCAACCTGGTTGCTATAAAAATAAAGTCATGACTTTGAAGTTAGTTTGGTTCTTTTATTGTCATAAGGTTAGCAGCCCTATTCCTTCCCAGctctccaaaacccagaattttttttggtttgaaattttaacctttctctttgaattgtggttttatcttattccagttacaatttgcattttcataatgatgaatgagactaag--cttatt--tgtgtagttgactgtacctttggattatttt-cctaagacccttttcaTTTCATATTTTCTTTATAATTTTAGAAAATGTAGTTTATAT-ATTGCAGCTTG---A-ATTTTTACTCA---------------GTTAATGGCATGCTTAATGGAGAGAAAAAATATTAATGAACTATATTTCCCTTTTTAATTACTATG-TTTTTTCTTTTTTAAGGAAATATTTCATTATGCTAAA-TTTTAGTGTTATTCTACTTAGCTATTCCTTAAGTAttatagta i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108119926 512 - 128169293 TGGGTGCTCTGTTCCCCTTACATTTTGACCCAGTTCTTGGCAACATGATTGCTATAAAAATAAAGTCATGGCTTTG--TTCTGTCTAGTTCTTTTATTGTGGTAAGGCTAGGAGACCTATTCCTTCCCAGTGCTCCACAACTCAGAA-TTTTTTTGGCTTGAAATTTTAGCTGTTCTCTTTGAAATGTAGTTTTATCATATTTCAGTTGCAATTTCCATTTTTATAATGATTAAGGA----AAG-TTTTTTTT-TCTGTAATTGACTGTACATTTGGGTTTTTTCCCCCAAATCACTTATCATTGCATGTTTTCTTCATGGTTTTAGAAAATGTAGTTTACAT-GTTGCAGCTTG---ATTTTTTTACATGTTGTTGATTTTACATGTTGTTGGTGTGCTTTATGGAGAGAAAGAATATTAATTGATTACATATCCCTTTTTAATTACTGt---------ttttttaaaaaaaattttcattatactaaatttttaGTGATATTCTTCTTAGCTATTCCTTAAATACTATAGCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 737277 490 - 18371965 CAGGCACTCCGTTCCCCTTACATTTTGACCCGGTTCTTGGCAACCTGGTTGCTATAAAAATAAAGTCATGGCTTTGAAGTCTGTCTAGTTCTTTTATTGTTGTATAGCTAGGAGACCTATTCCTTCTCAGCACTCCACAACTCAGAATTTTTTTTGGCTTGAAATTTTAGCTTTTCTCTTTGAAATGTACTTTTATCTTATTTCAGTTGCAATTTGCATTTTTATAATGATTAAGGA----AAG---TTTTTT-TCTGTAATTGACTGTACATTTGGATTTTTTTCCCCACATCCCTTATCATGTCATGTTTTCTTCATGGTTTTAGAAAATGTAGTTTACAT-GTCTCAGCTTG---TTTTTTTTACTCA---------------GTTAATGGTGTGCTTTATGTAGAGAAAAAATATTAATTAACTACATATCCCTTTTTAAATACGGT---------TTTTT-------AAATTTCATTTTACTGAATTTTTAGTGAT-TTTTTTTCAGCTACTCCTTAAATATTAGAGCA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1396702 498 + 3566421 CAGGTGCTCTGTTCCCCTTACATTTTAACTCAGTTCTTGGCAATCTGGTTGTTGTAAAAATAAAGTCATGGCTTTGAAGCCTGCCTAGTTCTTTTATTGTTTTAAGGCTAGGAGCCCTATTCCTTCCCAGTGCTCCACAACTCAGAA-ATTTTTTGGCTTGAAATTTCAGCTTTTCTCTTTGAAATGTAGTTTTATCTTATTTCAGTTGCAATTTGCATTTTTATAATGATTAAGGA----AAGTTTTTTTTT-TCTGTAATTGAC--TATATTTGGATTTTTTTCCCCAAATCCCATATCATTGCATGTTTTCTTCATGGTTTTAGAAAATGTAGTTTACAT-GTTGCAGTTTGATTTTTTTTTTACTCA---------------ATTAATGGTGTGCTTTATGGAGAGAACAAATATTAATTAACTACATATCCCTTCTTAATTACTGT---------TTTTTTAAA---AAATTTCATTATACTAAATTTTTAATGATATTTTTCTTAGCTATTCCTTAAATATTATAGCA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1898603 495 - 9267652 CAGGTTCTCCATTCCCCTTACATTTTGACCCAGTTCTTGGCAACCTGGTTGCTATAAAAATAAAGTCATGACTTTGAAGTCTGTCTAGTTCTTTTATTGTTGTAAGGCTAGGAGACCTATTCCTTCCCAGCGCTCCACAACTCAGAA--TTTTTTGGCTTGAAATTTTAGGTTTTCTCTTTGAAATGTAGTTTTATCTTATTTCAGTTGCAATTTGCATTTTTATAATGATTAAGGA----AAG--TTTTTTT-TCTGTAATCGACAGTACATTTGGATTTTTTTCCCCAAATCCCTTATCACTGCATGTTTTCTTCATGGTTTTAGAAAATGTAGTTTACAT-GTTGCAGCATG---ATTTTTTTACTCA---------------ATTAATGGTGTGCTTTATGGAGAGAA-AAATATTAATTAACTATATATCCCTTTTTAATTACTGT---------TTTTTAAAAAA-CAATTTGATTATACTAAATTTTTAGTGATATTCTTCTTAGCTATTTCTTAAATATTACAGCA i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66747376 1904 - 72422247 I e tarSyr2.KE946558v1 1031322 4664 - 1121937 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=3276.000000 s hg38.chrUn_KI270749v1 64495 1 + 158759 T s panPan2.chr7 108529420 1 - 162613886 t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 138622 1 + 150013 T i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55779224 1 + 99891981 t i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108120438 1 - 128169293 T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 737767 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1397200 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1899098 1 - 9267652 T i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 1035986 1 - 1121937 t i tarSyr2.KE946558v1 I 4664 N 0 e ponAbe2.chrUn 66747376 1904 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=1521430.000000 s hg38.chrUn_KI270749v1 64496 733 + 158759 TTTGGATTTCAC--ATAAATTTGTAAGATATCTTGAGTTTATTATGTAGAGAGTAAGGCTATTTTCTCTTTTTTG-TTTTttaaggt-aaaaatcacaaaatataaaattaataacttaaccattttaaagcatacaatgcacttgtttttagtatattcacaatgttccagggcaatttcatcatgtcccttccaaaaacccattaggcataaagttattacaccttattctgcttccctgagccctaacgaccactaacctgatttatatcccaattgatttgccaattcctgatgtttca-tgtgaataaaatcaagtaatatttgtccttttgtgcacttaacataatgctttcaaatttcacccatattataccatatataagtacttcattcttttttatagctgaaaa-----------------------------ttgggtgtccatttatgactcaacaagcatatggattgtttccactttttgactgtatgaatattaatgctgtaaatattcatgcacatgtttattttttgagcacctatgttttGtaagattaacagctgactt---aagagaaacaatggaagacaagaggcagtagaaaaatatattcaaaagatgcaaagg--aa-aaaaaactgtcagccatgaattccttatccagcaattatttttcaaaaatgaagataacacaaagacttacccagataaacagaaatattaactgaagt----tgttgctggcagacctaccatat-------------aaaaaaa s panPan2.chr7 108529421 732 - 162613886 cttggatttcacatataaatttttaacacatcttgagtttattatgtatagagtaaggCTATTTTCTCTTTTTTG-TTTTttaaggt-aaaaatcacacaatataaaattcacaacttaaccattttaaagtatacaatgcagttgcttttagtatattcacaatgttccaggacaatttcatcatgtcccttctaaaaacccattatgcataaagttgttacaccgtattctgcttccctgagccctaataaccagtaatctgatttatatcccaattgatttgccaattcctgatgtttca-tgtgaataaaatcaagtaatatctgtccttttgtgcacttagcataatgctttcaaatttcaccaatattttaccatgtataagtacttcattctttgttatagctgaaaa-----------------------------ttgggtgtccatttatgagtcaacaagcatatggattgtttccactttttgactgtatgaatattactgctataaatattcatgtacatgtttattttttgagcacctatgttttGtaagattaacagctgactt---aacagaaacaatggaaggcaagaggcagtagaataatatattcaaaagatgcaaagg-----aaaaaactgtctaccaccaattccttattcagtaattatttttcaaaaatgaagataacacaaagacttacccagataaacagaaatattaactgaagt----tgttgctggcagacctaccatac--------------aaaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 138623 737 + 150013 TTTGGATTTCACATATAAATTTGTTACACATCTTGAGTTTATTATGTATAGAGTAAGGCTGTTTTCTCTT------ttttttaaggt-aaaaatcacataatataaaattaataacttaagcattttaaagcatacaacgcagttgcttttagtatattcacaatgttgcaggacaatttcatcatgtcccttctaaaaacccattatgcataaagttgttacaccctattctgcttccctgagccctaatgaacactaatctgatttatatcccaattgacttgccaattcctgatgtttca-cgtgaataaaatcaagtaatatttgtccttttgtgcacttaacataatgctttcaaatttcacccatattataccatgtataagtacttcattctttgttacagctgaaaa-----------------------------ttgggtgtccatttatgagtcaacaagcatatggattgtttccactttttgactgtatgaatattactgctgtaaatattcatgcacatgtttattttttgagcacctatgttttGtaagattaacagctgactt---aagagaaacaatggaaggcaagaggcagtagaataatatattcaaaagatgcaaaga---a-aaaaaactgtcagccaccaattccttatccagcaattagttttcaaaaatgaagataacacaaagacttacccagagaaacagaaatattaactgaagt----tattgctggcagacctaccaaacaaacaaaa-----aaagaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55779225 734 + 99891981 tttggatttcacatataaatttgtaacacatcttgagtttattttgtatagagtaaggCTATTTTCTCTTTTTTG-TTTTttaaggtaaaaaatcacacaatataaaattcacaacttaacctttttaaagtacacaatgcagttgcttttagtatattcacagtgttccaagacaatttcatcttgtcccttctaaaaatccattatgcataaagttgttaccctgtattctgcttccctgagctctaatgaccactaatctgatttatatcccaactgatttgccaattcctgatgtttca-tgtgaataaaatcaaataatatttgtccttttgtgcacttagcataatgctttcaaatttaaccaa-attttaccatgtataagtacttcattctttgttatagctgaaaa-----------------------------ttgggtgtccatttatgagtcaacaagcatatggatggtttccactttttgactgtatgaatattactgctat-aatattcatgtacatatttattttttgagcacctatGCTTTGTGagattaacagctgactt---aacagaaacaatggaaggcaagaggcagtagaataatatattcaaaagatgcaaagg--aa-aaaaaactgtctaccaccaattccttatccagtaattatttttcaaaaatgaagataacacaaagacttacccagataaacagaaacattaactgaagt----tgttgctggcagacctaccatag-------------aaaaaaa i nomLeu3.chr17 C 0 I 303 s calJac3.chr8 108120439 762 - 128169293 TTCGAATTTTACATGCAAATTTGTAACACATCTTGAATTTATTATGTATAGAGTAAGTCTGTTTTCTCTTTTTTATTTTTttaaggt-aaaatttacataatataaaatttgtaactttcccattttaaagtatacaatgcagttgctttcagtaaatttacaatgttccaggacaatttcatcatgtcccttcc-acaatccattatgcataaagttgtcacctcctattctgctttcctgagtcctagtgaccattaatctgatttatatcccaattgatttgccaattcttgatgtttca-tgtgaataaaatcaagtaatatttgtccttttgtgcacttagcataatgctttcaaatttcacccatattatgccatgtgtacgtacttgattctttgttatagctg---aatcatctcattgagtgaatatatcacattttgtgtgtccatttatgagtcaacaggcatatggattgtttccactttttgactctatgaatattactgctataaatatttatgtacaagtttattttttgaacacctatgttctgtaagattaacagctgacttctcaacagaagaaatgaaaggtaaaaggcagtagactaatatattcaaaaggtgtgaaggg-aa-aaaaaactgtcaaccaccaattttatatccagtaattattttgcagaaatgaaggtaacacaaag----acccagataaacagaaatattagctg--gtttggtcttcaaagcagacctatcatacc------------aaaaa-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 737768 784 - 18371965 TTTGGATTTTACACACAAATTTGTAACACATCTTGAATTTATTATGTATAGTGTAAGGCTGTTTTCTCtttttta-ttttttaaggt-aaaattaacataatataaaattcacaactttcccattttaaagtatatgatgcagttgctttcagtaaattcacaacgttccaggacaatttcatcatgtccctccc-ataatccattatgcataaagttgtcacttccttttctgcttccctgagtcctagtgaccattaatatgatttatatcccaattgatttgccaatttctgatgtttcattgtgaataaaatcaagtaatatttgttcttttgtgcacttagcataatgctttcaaatttcaaccaaattatgccatgtgtaagtacttcattctttgttatagctgaaaaatcatctcatcaagtgagtatatcacattttgtgtgtccatttatgagtcaacaggtatatagattgtttccactttttgactctatgaatattattgctataaatatttatgtacaagtttattttttgaacacctatgttctgtaggattaacaactgacttctcaacagaaaaaatgaaaggtaaaaggcagtagaataatatattcaaaaggtgtgaagggaaa-aaaaaactgtcaaccaccaattttatagttagtaattatttttcagaaatgaaggtaacacaaaggcttacccagataaacagaaatattagctgaagtttggtatggaaggcagacctaccataccaaaaaaaaaaaaaaaaa-- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1397201 771 + 3566421 TTTGGATTTTACATACAAATTTGTAACACATCTTGAATTTATTATGTGTAGAGTAAGTCTGTTTTCTCttttttatttttttaaggt-aaaattcacataatataaaattctcaactttcccattttaaagtatacaatgcaattgctttcagtaaattcacaatgttccaggacaatttcatcatgtcccttcc-ataatccattatgcataaaattgtcacctcctattctgcttccctgagtcctagtgatcactaatctgatttatatcccaattgatttgccagttctttatgtttca-tgtgaataaaatcaagtaatatttgtccttttgtgcacttagcataatgctttcaaatttcacccatattatgccacgtgtaagtacttcattctttgttatagctgaaaaatcatctcactgagtgaatatatcacattttttgtgtccatttatgagtcaacaggcatatggattgtttcccctttttgactctatgaatatcactgctataaatatttatgtacaagtttattttttgaacacctatgttctgtaagactaacaactgacttctcaacagaaaaaatgaaaggtgaaaggcagtagaataatatattcaaaaggtgtgaaggaaaa-aagaaactgtcaaccaccaattttatatccagtatttatttttccaaaatgaaggtaacacagagacttacccagataaacagaaatattagctgaagtttggcatgcaaggcagagctaccatat-------------aaaaa-- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1899099 770 - 9267652 TTTGGATTTTACATACAAATTTGTAACACATATTGAATTTATTATGTATAGAGTAAGTCTATTTTCTCTTTTTTA-TTTTttaaggt-aaaattcacatgatataaaattcacgactttcccattttgaagtatacaatgcagttgctttcagtaaattcacaatgttccaggacaatttcatcatgt-ccttcc-ataatccgttatgcataaatttgctacctcctattctgcttccctgagtcctagtgaccattaatctgatttatatcccaattgatttgccaattcttgatgtttca-tgtgaataaaatcaggtaatatttctccttttgtgcatttagcataatgctttcaaatttcacccatattatgccatgtgtaagtacttcattctttgttatagttgaaaaatcatctcattgagtgaatatatcacatttagtgtgtccatttatgagtcaacaggcatatggattgtttccactttttgactctatgaatattaccgctataaatatttatgtacaagtttattttttgaacacctatgttctgtaagattaacagctgacttctcaacagaaaaaatgaaaggtaaaaggcagtagaataatatattcaaaaggtgtgaaggaaaacaaaaaactgtcaaccacccattttatatccagtaattatttttcagaaatgaaggtaacacaaagacttacccagataaacagaaatattagctgatgtctggtatggaaggcagacttaccatac-------------caaaa-- i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66747376 1904 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=1911.000000 s hg38.chrUn_KI270749v1 65229 1 + 158759 a s panPan2.chr7 108530153 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139360 1 + 150013 a i gorGor5.CYUI01000341v1 C 0 C 0 s calJac3.chr8 108121201 1 - 128169293 a i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 738552 1 - 18371965 a i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1397972 1 + 3566421 a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1899869 1 - 9267652 a i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66747376 1904 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I e nomLeu3.chr17 55779959 303 + 99891981 I a score=5746.000000 s hg38.chrUn_KI270749v1 65230 3 + 158759 aac s panPan2.chr7 108530154 3 - 162613886 aac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139361 3 + 150013 aac i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66749280 3 - 72422247 aac i ponAbe2.chrUn I 1904 I 3 s calJac3.chr8 108121202 3 - 128169293 aat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 738553 3 - 18371965 aat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1397973 3 + 3566421 aat i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1899870 3 - 9267652 aat i aotNan1.NW_018514471v1 C 0 C 0 e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I e nomLeu3.chr17 55779959 303 + 99891981 I a score=3120.000000 s hg38.chrUn_KI270749v1 65233 3 + 158759 tct s panPan2.chr7 108530157 3 - 162613886 act i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139364 3 + 150013 acc i gorGor5.CYUI01000341v1 C 0 C 0 s calJac3.chr8 108121205 3 - 128169293 att i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 738556 3 - 18371965 act i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1397976 3 + 3566421 act i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1899873 3 - 9267652 act i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66749283 3 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I e nomLeu3.chr17 55779959 303 + 99891981 I a score=2548.000000 s hg38.chrUn_KI270749v1 65236 1 + 158759 a s panPan2.chr7 108530160 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139367 1 + 150013 a i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66749286 1 - 72422247 a i ponAbe2.chrUn I 3 I 17 s calJac3.chr8 108121208 1 - 128169293 a i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 738559 1 - 18371965 a i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1397979 1 + 3566421 a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1899876 1 - 9267652 a i aotNan1.NW_018514471v1 C 0 C 0 e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I e nomLeu3.chr17 55779959 303 + 99891981 I a score=33432.000000 s hg38.chrUn_KI270749v1 65237 17 + 158759 aaataaattcctaaggc s panPan2.chr7 108530161 17 - 162613886 aaataaattcctaaggc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139368 17 + 150013 aaataaattcctaaggc i gorGor5.CYUI01000341v1 C 0 C 0 s calJac3.chr8 108121209 17 - 128169293 aaataaattcctaaggc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 738560 17 - 18371965 aaataaattcctaaggc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1397980 17 + 3566421 aaataaattcctaaggc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1899877 17 - 9267652 aaataaattcctaaggc i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66749287 17 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I e nomLeu3.chr17 55779959 303 + 99891981 I a score=2548.000000 s hg38.chrUn_KI270749v1 65254 1 + 158759 t s panPan2.chr7 108530178 1 - 162613886 t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139385 1 + 150013 t i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66749304 1 - 72422247 t i ponAbe2.chrUn I 17 I 427 s calJac3.chr8 108121226 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 738577 1 - 18371965 t i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1397997 1 + 3566421 t i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1899894 1 - 9267652 t i aotNan1.NW_018514471v1 C 0 C 0 e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I e nomLeu3.chr17 55779959 303 + 99891981 I a score=247044.000000 s hg38.chrUn_KI270749v1 65255 124 + 158759 aaaagcaagttacacaagccagtcatttgaatccacattttta-aaaaagtactggtataggtaatattaacattataaaa-acagtagaaatgcatgttttctctttatcataaattgtttataa s panPan2.chr7 108530179 125 - 162613886 aaaagcaagttacacaagacagtcatttgaatccacatttttt-aaaaagcactggcataggtaataataacattataaaagacagtagaaatgcatatgttctctttaccataacttgtttataa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139386 125 + 150013 aaaagcaagttgcacaagacagtcatttgaatccacttttttt-aaaaagcactggtataggtaaaattaacattataaaagacagtagaaatgcatgttttctgtttatcataaattgtttataa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55780262 126 + 99891981 aaaagcaagttacacaagacagtcatttgaatccacattttttaaaaaagtactggtataggtaataataacattataaaagacagtagaaatgcatattttctctttacaataatttgtttataa i nomLeu3.chr17 I 303 C 0 s calJac3.chr8 108121227 124 - 128169293 aaaagcaagttccagaagacagttatttaaatacacactttaa-aaaaagcactggtgtaggtaataataacattataaaaaacagtagaaatgcaca-tttctctttatcataacttatttataa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 738578 123 - 18371965 aaaagcaagtcccagaagacagttatttaaatccacatttt---aaaaagcactggtataggtaataataacattacaaaaggcagtagaaatacacactttctctttatcataacttatttataa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1397998 124 + 3566421 aaaagcaagttccagaagacagttatataaatccacatttt-a-caaaagcactggtataggtaataataacattataaaaaacagtagaaatgcacattttctctttatcataacttatttataa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1899895 118 - 9267652 aaaagtaagttccagaagacagttatttaaatccacatttt-a-aaaaagcactggtataggtaataataacattataaaaaacagtagaaatgcaca------ttttatcataacttatttataa i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66749305 427 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=7644.000000 s hg38.chrUn_KI270749v1 65379 4 + 158759 aata s panPan2.chr7 108530304 4 - 162613886 aata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139511 4 + 150013 aata i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55780388 4 + 99891981 aata i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108121351 4 - 128169293 aata i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107540v1 1398122 4 + 3566421 aata i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1900013 4 - 9267652 aata i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66749305 427 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 738701 0 - 18371965 C e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=6960.000000 s hg38.chrUn_KI270749v1 65383 5 + 158759 atatg s panPan2.chr7 108530308 5 - 162613886 atatg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139515 5 + 150013 atatg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55780392 5 + 99891981 atatg i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108121355 5 - 128169293 atatg i calJac3.chr8 C 0 C 0 s cebCap1.NW_016107540v1 1398126 5 + 3566421 atatg i cebCap1.NW_016107540v1 C 0 I 344 e ponAbe2.chrUn 66749305 427 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1900017 0 - 9267652 C e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 738701 0 - 18371965 C e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=6165.000000 s hg38.chrUn_KI270749v1 65388 9 + 158759 catataacg s panPan2.chr7 108530313 9 - 162613886 tgcataatg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139520 9 + 150013 tgtataatg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55780397 9 + 99891981 tgcataatg i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 108121360 9 - 128169293 tgcataatg i calJac3.chr8 C 0 I 2840 e ponAbe2.chrUn 66749305 427 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1900017 0 - 9267652 C e cebCap1.NW_016107540v1 1398131 344 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 738701 0 - 18371965 C e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=127097.000000 s hg38.chrUn_KI270749v1 65397 284 + 158759 gccaggcacgatggctcacgcctgtaatctcagcatttcgggaggccgaggcgggcatattacgaggccaggagatcgagaccatcctggctaacacagtgaaaccctgtctgtact-aaaaatacaaaaaattagccgggcgtgatggcgggcgcttgtagtcccagctactcgggaggctgaagctgaagaatggcatgaagccgggagatggagcttgcagtgagcggagattgtg--ccactgcactccagcctgggtggcagagggaggctccatctc------------aatg s panPan2.chr7 108530322 298 - 162613886 gctgggcacaaaggctcacgcctgtaatctcagcactttgggtggccgagatgggcgtattacgaggccaggagatcaagaccatcttggctaacacagtgaaaccctgtctctact-aaaaatacaaaaaataagccaggcgtgatggcaggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcatgaaccagggagacggagcttgcagtgagcagagattgtgctccactgtactccagcgtgggtgacagagtgagactccatgtcaataataataataatg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139529 286 + 150013 gccgggcacgatggctcacacctgtaatctcagcatttcgggaggctgaggcgggcatattacgaggccaggagattgagagcatcctggctaacataaggaaaccccgtctctact-aaaaatacaaaaaatta-tcgggcgtgatggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaagccaggagatggagcttgcagtgagcggagactgtg--ccaatgcactccagtctgggcaacagagggagactccgtctc---------aatgata i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55780406 285 + 99891981 actgggcatgacggctcacgcctgtaatctcagcactttgggaggccgagatgggcgtattacgaggccaggagatcgagaccatcttggctaatacagtgaaaccctgtctctactaaaaaatacaaaaaattacctaggcgtgatggcgggcacctgtagtcccagctacttgggagactgaggcaggcgaatggcgtgaacccaggagatggagcttgcagtgagcggagatagtg--ccactgcactccagcctgggcgacagagcaagactccatctc------------aata i nomLeu3.chr17 C 0 C 0 e ponAbe2.chrUn 66749305 427 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1900017 0 - 9267652 C e cebCap1.NW_016107540v1 1398131 344 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 738701 0 - 18371965 C e calJac3.chr8 108121369 2840 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=2730.000000 s hg38.chrUn_KI270749v1 65681 3 + 158759 ata s panPan2.chr7 108530620 3 - 162613886 ata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139815 3 + 150013 ata i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66749732 3 - 72422247 ata i ponAbe2.chrUn I 427 I 957 s nomLeu3.chr17 55780691 3 + 99891981 ata i nomLeu3.chr17 C 0 C 0 e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1900017 0 - 9267652 C e cebCap1.NW_016107540v1 1398131 344 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 738701 0 - 18371965 C e calJac3.chr8 108121369 2840 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=546.000000 s hg38.chrUn_KI270749v1 65684 2 + 158759 at s panPan2.chr7 108530623 2 - 162613886 at i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139818 2 + 150013 at i gorGor5.CYUI01000341v1 C 0 C 0 e ponAbe2.chrUn 66749735 957 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1900017 0 - 9267652 C e cebCap1.NW_016107540v1 1398131 344 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e saiBol1.JH378145 738701 0 - 18371965 C e calJac3.chr8 108121369 2840 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I e nomLeu3.chr17 55780694 0 + 99891981 C a score=1984.000000 s hg38.chrUn_KI270749v1 65686 7 + 158759 aataatg s panPan2.chr7 108530625 7 - 162613886 aataata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139820 7 + 150013 aataata i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55780694 3 + 99891981 ----ata i nomLeu3.chr17 C 0 C 0 s saiBol1.JH378145 738701 6 - 18371965 aataat- i saiBol1.JH378145 C 0 C 0 e ponAbe2.chrUn 66749735 957 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e aotNan1.NW_018514471v1 1900017 0 - 9267652 C e cebCap1.NW_016107540v1 1398131 344 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e calJac3.chr8 108121369 2840 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=69113.000000 s hg38.chrUn_KI270749v1 65693 54 + 158759 atatgtgcataatgtattgctgagtatttgacatatggaaatgtaatacgtcta s panPan2.chr7 108530632 54 - 162613886 atatgtgcataatgtattgctgagtatttgacatgtagaaatgtaatatgtcta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139827 54 + 150013 atatatgcataatgtattgctgagtatttgacatgcagaaatgtaatatgtcta i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55780697 54 + 99891981 atatgtgcataatgtattgctgagtatttgacatgtagaaatgtaatatgtcta i nomLeu3.chr17 C 0 C 0 s saiBol1.JH378145 738707 51 - 18371965 ---tgtgcataatgtattgctgagtatttaacatgtagaaatgtaatatgtctg i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1900017 54 - 9267652 atatgtgcataatgtattgctgagtatttaacatgtagaaatgtaatatgtcta i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66749735 957 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e cebCap1.NW_016107540v1 1398131 344 + 3566421 I e canFam3.chr18 51769239 2841 - 55844845 I e calJac3.chr8 108121369 2840 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=40258.000000 s hg38.chrUn_KI270749v1 65747 22 + 158759 taacatattttccagtaacatc s panPan2.chr7 108530686 22 - 162613886 taacatattttccaataacatc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139881 22 + 150013 taacatattttccagtaacatc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55780751 22 + 99891981 taacatattttccaataacatc i nomLeu3.chr17 C 0 I 1 s saiBol1.JH378145 738758 22 - 18371965 taacatattttccaataacatc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398475 22 + 3566421 taacgtattttctaataacatc i cebCap1.NW_016107540v1 I 344 C 0 s aotNan1.NW_018514471v1 1900071 22 - 9267652 taacatattttccaataacatc i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66749735 957 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e calJac3.chr8 108121369 2840 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I e macFas5.chr3 67306146 5 + 192294377 I a score=5936.000000 s hg38.chrUn_KI270749v1 65769 3 + 158759 aaa s panPan2.chr7 108530708 3 - 162613886 aaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139903 3 + 150013 aaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55780774 3 + 99891981 aaa i nomLeu3.chr17 I 1 C 0 s macFas5.chr3 67306151 3 + 192294377 agg i macFas5.chr3 I 5 C 0 s saiBol1.JH378145 738780 3 - 18371965 aaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398497 3 + 3566421 aaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1900093 3 - 9267652 aaa i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66749735 957 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e calJac3.chr8 108121369 2840 - 128169293 I e colAng1.NW_012115910v1 1757951 268 + 6934359 I e chlSab2.chr21 5713952 382 + 127223203 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=11511.000000 s hg38.chrUn_KI270749v1 65772 3 + 158759 aag s panPan2.chr7 108530711 3 - 162613886 aag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139906 3 + 150013 aag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55780777 3 + 99891981 aag i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67306154 3 + 192294377 aaa i macFas5.chr3 C 0 C 0 s chlSab2.chr21 5714334 3 + 127223203 aag i chlSab2.chr21 I 382 C 0 s colAng1.NW_012115910v1 1758219 3 + 6934359 aag i colAng1.NW_012115910v1 I 268 C 0 s saiBol1.JH378145 738783 3 - 18371965 aag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398500 3 + 3566421 aag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1900096 3 - 9267652 aag i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66749735 957 - 72422247 I e manLeu1.NW_012105809v1 1180883 441 - 1799296 I e macNem1.NW_012011522v1 2787393 631 + 3123512 I e rheMac8.chr3 133475857 615 - 185818997 I e canFam3.chr18 51769239 2841 - 55844845 I e calJac3.chr8 108121369 2840 - 128169293 I e cerAty1.NW_012000909v1 2508214 513 + 10077455 I a score=3564272.000000 s hg38.chrUn_KI270749v1 65775 500 + 158759 gaggtagttggaagaaaaatgtattgtgataaggtaatcactctagatggtaaagcaataattactaaaatatattgttggctttgtaacgttaatagatgtaacgtgtaaagtgataatactttaaaatggaggaaataaaagagatttgtataagaatgatgtttctatgtattactaaaagtttactggtataaattggaagatgatttgaataactaattttccatatacctatatggtaaacttacaacaaccacaaaaattctcaaaaatatatagtaaaataattcattagtaatctagagttccctattttagaaaatattcattcattgcaaaataaag----aaagaaaaatatttgagaaatatacacaacaaacggtaaaatggcagacataaatagaattataccaattataatattaaatgtgagcagattaa--aatcccttcaagaggcagagattgtcagactggattaaaacaagtgatcccaatata s panPan2.chr7 108530714 503 - 162613886 ggggtagttggaagaaaaatgttttgtgataaggtaattactatagatggtaaagtaataattactaaaatgtactgtcagctttataactttaatagatgtaatgtgtaaagtgataatagtttaaaatggaggaaataaaacagatttgtataagaatgatgtttctatgtattactaaaatttagctagtgtaaattggaagatgatttgaataattaattctccatatacctgtgtggtaaacttacaacaacaacaaaaattctc-aaaatatatagtaaaataattcattagtaatctaacgttctctattttagaaaatattcattcattgcaaaataaagcaataaagaaaaatatttgagaaatatacaaaacaaacagtaaaatggcagacataaatagaattataccaattataatattaaatgtgagcagattaa--aatccagtcaagaggtagagattgtcagactggattaaaacaagagatcccaatata i panPan2.chr7 C 0 I 23 s gorGor5.CYUI01000341v1 139909 504 + 150013 gaggtagttggaagaaaaatgtatcatgataaggtaatcactctagatggtaaagtaataattactaaaatatattgttggctttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaacggaggaaataaaagagatttgtataagaatgatgtttctatgtgttactgaaattttactagtataagttggaagatgatttgaataattaattttccatatacctatatggtaaacttacaacaacaacaaaaattctcaaaaatatatagtaaaataattcattagtaatctaaagttccctattttagaaaatattcattcattgcaaaataaagcaataaagataaatatttgagaaatatacaaaacaaacggtaaaatggcagacataaacagaattataccaattataatattaaatgtgaacagattaa--aatccaatcaagaggcagagattgtcagactggattaaaacaagtgatcccaatata i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55780780 503 + 99891981 gagatagtt-gaagaaaaatgttttgtgataaggtaattactatagatggtaaagtaataattactaaaatgtattgttggctttgtagctttaatagatgtaatgcgtaaagtgataatactttaaattggaagaaataaaagagatttgcataagaatgacgtttctatgtattactaaaatttagctagtataaattggaagatgatttgaataattaattttccatatacctatatggtaaacttacaacaacaacaaaaattctcaaaaatatatagtaaaataattcattagtaatctaaagttctctattttagaaaatattcattcattgcaaaataaagcaataaagaaaaatatttgagaaatatacaaaacaaacagtaaaatggcagacataaatagaattacaccaattataatattaaatgtgagcagattaa--aatccagtcaagaggtagagattgtcagactggattaaaacaagtgatcccaatata i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133476472 504 - 185818997 gaGGTAGCTGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaagtaataattattcaaatgtattatcgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaac-agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaacttacaatgacaac-aaaattctcaaaaatatatagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaataataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatata i rheMac8.chr3 I 615 I 16 s macFas5.chr3 67306157 502 + 192294377 gaGGTAGCTGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaagtaataattattcaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaac---agatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaacttacaatgacaac-aaaattctccaaaatatataataaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaataataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatata i macFas5.chr3 C 0 I 16 s macNem1.NW_012011522v1 2788024 504 + 3123512 gaGGTAGCTGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaagtaataattattcaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaac-agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaacttacaatgacaac-aaaattctcaaaaatatatagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaagtgacagacataaatagaataataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatata i macNem1.NW_012011522v1 I 631 I 16 s cerAty1.NW_012000909v1 2508727 503 + 10077455 gaGGTAGCTGGAAGAAAAATGTATTGTGATAAGGTAATTACTATACATGGtaaagtagtaattattaaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaaa-agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaacttacaatgacaacaaaaattctcaaaaatatatagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatggaattataccaattataatattatatgtgagcagattaaataatccaatc--gaggtacagatggtcagactggattaaaacaagtgatcccaatata i cerAty1.NW_012000909v1 I 513 I 16 s chlSab2.chr21 5714337 495 + 127223203 gaggtag-tggaagaaaAATGTATTGTGATAAGGTAATTACTATAGATGGtaaggtaataattattaaaatgtattgttgattttgtaactttaatagatgtaatgtgtaaagtgataatattttaaaatggaggaaaaa--agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagtttatttgaataattaattttccatatacctgtatggttaacttacaacgacaacaaaaatcctcaaaaatatatagtacaataattcattagtaaactaaagttctctattttagaaaat----attcattgcaaaataaagcaataaagaaaaatatttgagaaatacaccaaacaa----taaaatgacagacataaatagaattataccaattataatattatatgtaagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatata i chlSab2.chr21 C 0 I 23 s manLeu1.NW_012105809v1 1181324 501 - 1799296 gaGGTAGCTGGAAGAAAAATGCATTGTGGTAAGGTAATTACTATAGATGGtaaagtaataattattaaaatgtattattgattttgtaactttaatagatgtaatatgtaaagtgatagtactttaaaatggaggaaaa-----agacttgtataagaatgatgtttctatgtattactaaaattcagttcgtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaacttacaatgacaacaaaaattctcaaaaatatatagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaattataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatata i manLeu1.NW_012105809v1 I 441 I 23 s colAng1.NW_012115910v1 1758222 502 + 6934359 gaGGTAGTTGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaggtaataattattaaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaa----agatttgtataagaatggtgtttctatgtgttactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggcaaacttacaatgacaacaaaaattctcaaaaatgtatagtaaaataattcattagtaaactaaagttctctattttagaaaacactcattcactgcaaaataaagcaattaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaattataccaattataatattatatgtgagcagattaaataatccagtcaagaggtagagatggtcagactggattaaaacaagtgatcccaatata i colAng1.NW_012115910v1 C 0 I 23 s saiBol1.JH378145 738786 499 - 18371965 taggtatttggaagaaaattgcattgtgataagataattactatagatggtaaagtaatcattattaaactgtattgttggttttgtaactttaatagatgtaatgtataaagtgacggtcctttaaaatggatgaaataaaagacacttgtatgag---aatgtttctatgtgttactaaagtttagctagtataaattggaagttgatttgaataattaattttccatatacctatagggtaaacttgcaac-acaac-aaaactctcaaaaatatatagtaaaataagtcattgggaaactaaagtt--ctgttttagaaaatattcatttattgcaaaataaagcaataaagaaaaatatttgagaaatatacaaaacaaatagtagaatggcagacataaatagaattgtaccaattattatattaaatgtgagcagattaagcaacccaatcaagaggcagagattgtcagactgaattaaaacaagggatcccaatata i saiBol1.JH378145 C 0 I 5 s cebCap1.NW_016107540v1 1398503 503 + 3566421 taggtatttggaagaaaattgtattgtgataaggtaattactatagatggtaaagtaatcatcattaaactgtattgttggctttgtaactttaatagatgtaatgtataaagtgatgatactttaaaatggatgaaataaaagagacttgtatgagaataatgtttccatgtattattaaaatttagctagtataaattggaagtttatttgaataattaattttccatatacctatagggtaaacttacaacaacaac-aaaactctcaaaaatatatagtaaaataattcattgggaaactaaagtt--ctattttagaaaatattcatttattacaaaataaagcaataaagaaaaatatttgagaaatatacaaaacaaacagtaaaatggcagacataaatagaattgtaccaattattatattaaatgtgagcagattaaacaacccaatcaagaggcagagattgtcggattgatttaaaataagtgatcccaatata i cebCap1.NW_016107540v1 C 0 I 5 s aotNan1.NW_018514471v1 1900099 499 - 9267652 taggcatttggaagaaaattgtattgtgataaggtaattactatagatagtaaagtcataattgttaaaatgtattgttggctttgtaactttaatagatgta----ataaagtgacaatactttaaaatggat-aaataaaagagacttgtataagaataatgtttctatgtattactaaaatttagctagtataaattggaagttgatttgaataattaattttccatatacctatatggtaaacttacaacaacaacaaaaactctcaaaaatatatagtaaaataattcattgggaaactaaagtt--ctattttagaaaatattcatttattacaaaataaagcaataaagaaaactatttgagaaatatacaaaacaaacagtaaaatggtagacatgaatagaattgtaccaattattatattaaatgtgagcagattaaacaacccaatcaagaggcagagattgtcagactcaattaaaacaagtgatcccagtata i aotNan1.NW_018514471v1 C 0 I 5 e ponAbe2.chrUn 66749735 957 - 72422247 I e canFam3.chr18 51769239 2841 - 55844845 I e calJac3.chr8 108121369 2840 - 128169293 I a score=2289.000000 s hg38.chrUn_KI270749v1 66275 4 + 158759 ccca s gorGor5.CYUI01000341v1 140413 4 + 150013 cgct i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55781283 4 + 99891981 cgct i nomLeu3.chr17 C 0 I 19 s rheMac8.chr3 133476992 4 - 185818997 caca i rheMac8.chr3 I 16 I 3 s macFas5.chr3 67306675 4 + 192294377 caca i macFas5.chr3 I 16 I 3 s macNem1.NW_012011522v1 2788544 4 + 3123512 caca i macNem1.NW_012011522v1 I 16 I 3 s cerAty1.NW_012000909v1 2509246 4 + 10077455 caca i cerAty1.NW_012000909v1 I 16 I 3 s saiBol1.JH378145 739290 4 - 18371965 tcta i saiBol1.JH378145 I 5 C 0 s cebCap1.NW_016107540v1 1399011 4 + 3566421 tcta i cebCap1.NW_016107540v1 I 5 C 0 s aotNan1.NW_018514471v1 1900603 4 - 9267652 tcta i aotNan1.NW_018514471v1 I 5 C 0 e ponAbe2.chrUn 66749735 957 - 72422247 I e manLeu1.NW_012105809v1 1181825 23 - 1799296 I e canFam3.chr18 51769239 2841 - 55844845 I e calJac3.chr8 108121369 2840 - 128169293 I e colAng1.NW_012115910v1 1758724 23 + 6934359 I e chlSab2.chr21 5714832 23 + 127223203 I e panPan2.chr7 108531217 23 - 162613886 I a score=2489436.000000 s hg38.chrUn_KI270749v1 66279 356 + 158759 --------------gagatgcaaggatactaatggattgaaagtaaaaagatgacaaaaaataccatgtaaagagcaatcataagaaaactgaactcattatactcataacacacgaggtagactaat-aaaatgtgaataggattttaaaaatttatattgtagtaataagagggtcaacgctttcggaagacatagctattacaatcatgtatgc-acAGAtaggagctaaattgtttcctctatatagatgctgaaatcctaaccactgaaaatgacctcattagaaaataggttctttgcaggtgattaagttaagataaaatcagatgagcctgaattcaatatga-------------------------ctgatgtccttataaaaa----aaa s panPan2.chr7 108531240 361 - 162613886 --------------gagatgcaaggatactaatggattgaaagtaaaaaggtgacaaaaaatatcatgcaaagagcaatcataagaacactgaactcattatactcacaacacacaatatagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaatgctttaggaagacatggctattacaatcatatatgc-actgatatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatacaacctcattaggaaataggttcttcgcaggtggtcaagttaagataaaatcagatgagccttaattcaatatga-------------------------ctgatgtctttataaaaagaagaaa i panPan2.chr7 I 23 C 0 s gorGor5.CYUI01000341v1 140417 360 + 150013 --------------gagatgcaaggatactgatgggttgaaagtaaaaagacgacaaaaaa-atcatgcaaagggcaatcataagaacactgaactcattatactcataacacacaatatagactattaaaaatgtgaataggattttaaaaatttatactgtagtaagaagggtgtcaacgctttaggaagacatagctattacaatcatgtatgc-acagatatgagctaaattgtttcctctatatagatgctgaaatcctaaccactgaatatgacctcatgaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagcctgaattcaatatga-------------------------ctgatgtccttataaaaagaagaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55781306 359 + 99891981 --------------gagatgcaaggatactaatggattgaaagtaaaaagatgacaaaaaatatcatgcaaagagcaatcataagaacactgaactcattatactcataacaca--atataaactattaaaaaagtgaataggattttaaaaatttatattgtagtaataagggggtcaatgctttaggaagacataggtattacaatcatatatac-actgatatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatatgacctcattaggaaataggttctttgcaggtggtcaagttaagataaaatcagatgagccttaattcactatga-------------------------ctgatgtccttataaaaagaagaaa i nomLeu3.chr17 I 19 C 0 s rheMac8.chr3 133476999 361 - 185818997 --------------gagatgcaaggatactaatggattgaaagtaaaaagatgacaaaaaatatcatgcaaagagcaaccataagaacactgaactcattatactcctaatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatatgacctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatgg-------------------------ctgatgtccttatacaaagaagaaa i rheMac8.chr3 I 3 C 0 s macFas5.chr3 67306682 361 + 192294377 --------------gagatgcaaggatactaatggattgaaagtaaaaagatgacaaaaaatatcatacaaagagcaaccataagaacactgaactcattatactcctaatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatatgacctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatgg-------------------------ctgatgtccttatacaaagaagaaa i macFas5.chr3 I 3 C 0 s macNem1.NW_012011522v1 2788551 361 + 3123512 --------------gagatgcaaggatactaatggattgaaagtaaaaagatgacaaaaaatatcatacaaagagcaaccataagaacactgaactcattatactcctaatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatatgaccttattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatgg-------------------------ctgatgtccttataaaaagaagaaa i macNem1.NW_012011522v1 I 3 C 0 s cerAty1.NW_012000909v1 2509253 360 + 10077455 --------------gagatgcaaggatactaat-gattgaaagtaaaaagatgacaaaaaatatcataaaaagagcaaccataagaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggattttaaaaatttgtattgtagtaataaggggatcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctgtatagatgctgaaatcttaacctctgaatatgacctcattaggaagtaggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatga-------------------------ctgatgtccttataaaaagaagaaa i cerAty1.NW_012000909v1 I 3 C 0 s chlSab2.chr21 5714855 361 + 127223203 --------------gagatgcaaggatactaatggattgaaagtaaaaagatgacaaaaaatatcatacaaagagcaaccataagaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggagtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctacatagatgctgaaatcctaatctctgaatatgccctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatga-------------------------ccgatgtccttataaaaagaagaaa i chlSab2.chr21 I 23 C 0 s manLeu1.NW_012105809v1 1181848 360 - 1799296 --------------gagatgcaaggatactaat-gattgaaagtaaaaagatgacaaaaaatatcataaaaagagcaaccataagaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggattttaaaaatttgtattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctacataggtgctgaaatcttaacctctgaatatgacctcattaggaaataggttctttgcaggtaatcaagttaagataaaatcagatgagccttaatccaatatga-------------------------ctgatgtccttataaaaagaagaaa i manLeu1.NW_012105809v1 I 23 C 0 s colAng1.NW_012115910v1 1758747 361 + 6934359 --------------gagatgcaaggatactagtggattgaaagtaaaaagatgacaaaagatatcatacaaagagcaaccataaaaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggatttttaaaatttgtattgtaataataaaggggtcaactcttcaggaagacatagctattacaatcatatatgc-actgatatgagctaaattgtttcctctacatagatgctgaaatcctaacctctgaatatgacctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcaaatgagccttaattcaatatga-------------------------ctgatgtccttataaaaagaagaaa i colAng1.NW_012115910v1 I 23 C 0 s saiBol1.JH378145 739294 377 - 18371965 gagaaggcaaattcgggatgcaaagatactaacaaattgaaagtaaaaagatgacaagacatattatgcaagcagcaaccataagaacactgaacccattatactcatagcacacaatgtagactattgaaaatgtgaatagagttttaaaaatttatattgtagtcataagggggtcaactctttaggaagac-------------------atgc-actgatatgagctacattgcttcccctctgaagatgctgaaatactaacctctgaatatgacctcattaggaaatacattttctgcatatgatcaggttaagataaaatcagacgagctttaattcaatatgattgatgtcttattaaaagaagaaatttgatgtc-ttattaaaagaag--- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1399015 351 + 3566421 gagaaggcaaattcgggatgcaaagatactaacagcttgaaagtaaaaagatgacaagacatattatgcaagcagcaaccataagaacactgaacccattatactcatagcacacaatgtaggctattgaaaatgtgaatagagttttaaaaatttatattgtagtaataagggggtcaagtctttaggaaaac-------------------atgc-actgatatgagctatattg-tttccctctgaagatgctgaaatcctaacctctgaatatgacctcattaggaaatacgttttttgcagactatcaagttaagataaaatcagatgagccttaattcaatatga-------------------------ttgatgtc-ttattaaaagaag--- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1900607 353 - 9267652 gagaaggcaaattcgggatgcaaagatactaacagattgaaagtaaaaagatgacaagacatattatgcaagcagcaaccatatgaacactgaacccattatactcatagcacacaatgtagactattgaaaatgtgaatagagttttaaaaatttatattgtagtaataagggggtcaactctttaggaagac-------------------atGCTAGtgatatgagctacattgtttcccctccaaagatgctgaaatcctaacctccgaatatgacctcattaggaaatatgttttttgcagatgatcaagttaagataaaatcagacgagctttaattcaatatga-------------------------tcgatgtc-ttattaaaagaag--- i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66749735 957 - 72422247 I e canFam3.chr18 51769239 2841 - 55844845 I e calJac3.chr8 108121369 2840 - 128169293 I a score=-12635.000000 s hg38.chrUn_KI270749v1 66635 1 + 158759 -a s panPan2.chr7 108531601 1 - 162613886 -t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 140777 1 + 150013 -t i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66750692 1 - 72422247 -t i ponAbe2.chrUn I 957 I 1590 s nomLeu3.chr17 55781665 1 + 99891981 -t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133477360 1 - 185818997 -t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67307043 1 + 192294377 -t i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2788912 1 + 3123512 -t i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2509613 1 + 10077455 -t i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5715216 1 + 127223203 -t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1182208 1 - 1799296 -t i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1759108 1 + 6934359 -t i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 739671 1 - 18371965 a- i saiBol1.JH378145 C 0 I 3 s cebCap1.NW_016107540v1 1399366 1 + 3566421 a- i cebCap1.NW_016107540v1 C 0 I 3 s aotNan1.NW_018514471v1 1900960 1 - 9267652 a- i aotNan1.NW_018514471v1 C 0 I 3 e canFam3.chr18 51769239 2841 - 55844845 I e calJac3.chr8 108121369 2840 - 128169293 I a score=4530070.000000 s hg38.chrUn_KI270749v1 66636 622 + 158759 ttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaggaagggcaaagactgccactaaaccaccagaagcaagaaacaaggcacagaacagactttctctcatagcctttgaagggaccatccctgctgacacctcaatctcagacttttagcttccaggactataagactataaatgtatgttgttcaaggcacccagtttgtgttagttggttatgggagccctagaaaactaatacaTGAACTAATAACAAAGCATAATAACATGAAGAAAAAATTGACAAAAGAGGAGCatcagcaaaacggcagtggagacagctgcaatctttcatttccccatagaaacatc--acacaactaagagaaactgtccgaataaactttgccaaaactctggaaaatggtcaaaagattacaacaaccaagtgaaagcagactcaagaaaaagacaatttgaaaactttatgacatttttagcttgcctttgcagcagcaaattggcagttttgaagtgtcagaagcccacgttcccagtgaggaaccctgg-tccatga-tccaaaggaacaagagaagatcttaccaacaaattactat-- s panPan2.chr7 108531602 621 - 162613886 ttgagtagagggagacatacacacagggagagtaccatgtgattatgaggacagagattagccaaggaatgccaaagactgccactaaaccaccagaagctagaaacaaggcatagaacagacttcctctcatagcccttgaagggaccatccctgctgacacctcaatctcagacttttagcttccaggactataagacaataaatttatgttgttcaaggcactcagcttgtgttacttggttatggcagccctagaaaactaatacatgaactaataaaaaagcataataacatgaagcaaaagttgacaaaaGAGGAGCatcagcaaaatggcaatggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaagagaaattctcagagtaaactttgccaaaactctggaaaatggtcaaaagattacaacaaccaagtgaaagcagactcaataaaaagacaactagaaaactttatgacatttttaacttgcctttgccccagcaaa--ggcagttttgaagtgttagaagcccatgttcccagtgtggaaccctgg-tccatggctccaaaggaacaagagaagctcttacccgcaaattattat-- i panPan2.chr7 C 0 I 2 s gorGor5.CYUI01000341v1 140778 621 + 150013 ttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccactaagccaccagaagctagacacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgacacctcaagctcagatttctagcttccaggactataagactataaatgtatgttgttcaaggcacccagtttgtgttagttggttatgggagccctagaaaactaatacatgaactaataacaaagcataataacatgaagcaaaaattgacaaaaGAGGAGCatcagcaaaa-agcagtggagacagctgcaatctttcatttccccacagaaacatc--acacaactaagagaaactgtccgaataaactttgccaaaactctggaaaatggtcaaaagattacaacaaccgagtgaaagcagactcaagaaaaagacaactggaaaactttatgacatttttaacttggctttgccccagcaaattggcagttttgaagtgtcagaagcccatgttcccagtgaggaaccctgg-tccgtgg-tccaaaggaacaagagaagatcttacccgcaaattattat-- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55781666 621 + 99891981 ttgagtagagggagacatacacacagggagagtaccatgtgagtatgaggg-agagattagcccaggaatgccaaagactgccactaaaccaccagaagctagaaacaaggcacagaacaggctttctctcatagcacttgaagggaccatccctgctgacacctcaacctcagacttttagcttccaggactataaaatgataaatttatgttgttcaaggcactcagtttgtgttacttggttacagcagccctagaaaattaataaatgaactaataaaaaagcacaataacatgaagcaaaaattgacaaaaGAGGAGCatcagcaaaatagcagtggagacag-tgcaatctttcatttccccacagaaacatc--acacaactaagagaaactgtcagaataaactttgccaaaactctggaaaatggtcaaaagattacaacaaccaagtgaaagcagactcaagaaaaagacaacttgaaaactttatgatatttttaacttgcctttgccccagcaaactggcagttttgaagtgttagaagcccatgttcccagtgtggaacactgg-tccatggctccaaaggaacaagagaagatcttacccgcaaattattat-- i nomLeu3.chr17 C 0 I 2 s rheMac8.chr3 133477361 622 - 185818997 ttgagtagagggagacacacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgatgcctcaatctcaaacttttagcttccaagactataagacaataaatttatgttgttcaaggcacccagtttgtg-tacttggttgaggcagccctagaaagctaatacatgaaataataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctacaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaactttaaaactttatgacatttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattat-- i rheMac8.chr3 C 0 I 2 s macFas5.chr3 67307044 622 + 192294377 ttgagtagagggagacacacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgatgcctcaatctcaaacttttagcttccaagactataagacaataaatttatgttgttcaaggcacccagtttgtg-tacttggttgaggcagccctagaaagctaatacatgaactaataacagagtataataacacgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaactttaaaactttatgacatttttaatttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattat-- i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 2788913 622 + 3123512 ttgagtagagggagacacacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgatgcctcaatctcaaacttttagcttccaagactataagacaataaatttatcttgttcaaggcacccagtttgtg-tacttggttgaggcagccctagaaagctaatacatgaactaataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgacatttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattat-- i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 2509614 622 + 10077455 ttgagtagagggagacatacacacagggagagtaccatgtgattttgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgacgcctcaatctcagacttttagcttccaggactataagacaataaatttatgttgttcaaggcactcagtttgtg-tacttggttgaggcagccctagaaagctaatacatgaactaataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgtcagaatgaactttaccaaaactctggaaaatggtgaaaagatgacaacaaccaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgacatttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattat-- i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 5715217 621 + 127223203 ttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccactaaacccccagaagctagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgac-cctcaatctcagacttttagcatccaggactataagataataaatttatgttattcaaggcacccagtttgtg-tacttggttaaggcagccctagaaagctaatacatgaactaataacagaatataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactaccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgacatttttaacttgcctgtgccccagcaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattat-- i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 1182209 622 - 1799296 ttgagtagagggagacatacacacagggagagtaccatgtgattttgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgacgcctcaatctcagacttttagcttccaggactataagacaataaatttatgttgttcaaggcacccagtttgtg-tacttggttgaggcagccctagaaagctaatacatgaactaataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggaaacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgtcagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaatcaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgacatttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggggaagatcttacctgcaaattattat-- i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 1759109 602 + 6934359 ttgagtagagggagacatacacacat-----gtaccatgtgattatgagggcagagattagccaaggaatgccgaagactgccattaaaccaccagaagctagaaacaaggcatagaaca-actttctctcatagcccttgaagggaccatccctgctgacacctcaatctcagacttttagcttctaggactataagacaataaatttatgttgttcaaggcacctagtttgtg-tacttggttaaggcagccctagaaagctaat-------------acagagtttaataacacgaagcaaaaaatgacgaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaataaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagt-aaagacaacttgaaaactttatgacatttttaacttgcctgtgccccagcaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaaccctgg-tccatggctccagaggaacaagagaagatcttacccgcaaattattat-- i colAng1.NW_012115910v1 C 0 I 2 s saiBol1.JH378145 739675 618 - 18371965 ttgagtaaagggagacatacacatagggagagcaccatgtgattatgaaggcagagataagccaaggaatgccaacgactaccactaaatcaccagaagctagaaacaaggcatagaacagactgtctctcatagccctt-aaggtaccatacctgctggcccctcagtctcagacttttagcttccaggactgtaagacaa-aaatttatgttgttcaaggcacccagtttgtgttgtttggttatggcagccctagaaaactaatacattaactaataacagagtataataaaatgaagcaaacattgac-----agaaCCGTCATCaaaatggcagtggagacagcttcaatctttcatttcaccacagaaacatc--aaaaaactaaaagaaactgtcagaataaactttgtcaaaactctggaaaatagtgaaaatattacaacaaccaagtgaaagcagactcaagaaaaagacaacttgaaaactttatgacatttttaacttgcctatgcctcgctgaagtggcagttttgaagggtcagaagcctacattccccatgtggaaccctgg-tccatggttccaatggaataagagacgatcttactggaaaatgattatat i saiBol1.JH378145 I 3 C 0 s cebCap1.NW_016107540v1 1399370 622 + 3566421 ttgagtaaagggagacatacacatagggagagcaccatgtgattatgaaggcagagattagccaaggaatgccaaaaactgcctctaaatcaccagaagctagaaacaaagcatagaacagactgtctctcatagcccttgaagggaccatccctgctgacacctcagtctcagacttttagcttccaggactgtaagacaa-aaatttatgttgttctaggcactcagtttgtgttgcttggttatggcagccctagaaaactaatacatgaactaacaacagagtataataacatgaagaaaaaattgac-----agaaCCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatcaaaaaaaactaaaagaaactgtcagaataaactttgtcaaaactctggaaaatagtgaaaatattacaacaaccaagtgaaataagactcaagaaaaagacaacttgaaaacttcatgacatttttaacttgcctatgcctcactgaagtggtagttttgaagtgtcagaagcctacattccccatgtggaaccctggttccatggttccaatggaataagagaagatcttactggaaaatgattatat i cebCap1.NW_016107540v1 I 3 C 0 s aotNan1.NW_018514471v1 1900964 619 - 9267652 ttgagtaaagggagacatacacatagagagagcatcatgtgattatgaaggcagagattagccaaggaatgccaaaggctgccactaaatcaccagaagctagaaacaaggcatagaacagactgtctctcatagcccttgaagggaccatccctgctgacacctcagtctcagacttttagcttccaggactgtaagacaa-aaatttatgttgtttaaggcacccagtttgtgttgcttggttatggcagccctagaaaactaacacaTGAACTAATAACAGAGTATAATAACATGAAACAAAAGTTCAC-----AGAACCatcagcaaaatggcagtgaagacagctgcaatctttcatttccccacagaaacatc--aaaaaactaaaagaaaccgtcagaataaacttcgtcaagactctggaaaatagtgaaaatattacaacaaccaagtgaaagcagactcaagaaaaagacaacttgaaaactttatgacatttttaacttgcctatgcctcactgaagtggcagttttgaagtgtcagaagcctacgttccccatgtggaaccctgg-tccgtggttccaatggaataagagacgatcttactggaaaatgattatat i aotNan1.NW_018514471v1 I 3 C 0 e ponAbe2.chrUn 66750693 1590 - 72422247 I e canFam3.chr18 51769239 2841 - 55844845 I e calJac3.chr8 108121369 2840 - 128169293 I a score=136098.000000 s hg38.chrUn_KI270749v1 67258 16 + 158759 gtgtctgttctgactg s panTro5.chr22 3655237 16 + 37823149 Gtgtctattctgacag i panTro5.chr22 N 0 C 0 s panPan2.chr7 108532225 16 - 162613886 atgtctgttctgactg i panPan2.chr7 I 2 C 0 s gorGor5.CYUI01000341v1 141399 16 + 150013 gtgtctgttctgactg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55782289 16 + 99891981 atgtctgttctgactg i nomLeu3.chr17 I 2 C 0 s rheMac8.chr3 133477985 16 - 185818997 atgtctgttctgactg i rheMac8.chr3 I 2 C 0 s macFas5.chr3 67307668 16 + 192294377 atgtctgttctgactg i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 2789537 16 + 3123512 atgtctgttctgactg i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 2510238 16 + 10077455 atgtctgttctgactg i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 5715840 16 + 127223203 atgtctgttctgactg i chlSab2.chr21 I 2 C 0 s manLeu1.NW_012105809v1 1182833 16 - 1799296 atgtctgttctgactg i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 1759713 16 + 6934359 atgtctcttctgactg i colAng1.NW_012115910v1 I 2 C 0 s saiBol1.JH378145 740293 16 - 18371965 atgtttgttccaactg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1399992 16 + 3566421 atgtttgttctaactg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1901583 16 - 9267652 atgtttgttctaactg i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66750693 1590 - 72422247 I e canFam3.chr18 51769239 2841 - 55844845 I e calJac3.chr8 108121369 2840 - 128169293 I a score=4041868.000000 s hg38.chrUn_KI270749v1 67274 490 + 158759 gtctgggggatacctaaaggactcatgaaaggct--ttt--gttttttctgtgttgctagaatacagaacagataaggaatggacattatcaagaaactctgcaaggagacctaacaaaccacagatgcttagggcaaaaattagagctt-acacatgtagtagatcaccttcagcacaggaagaaaagt-tggagaagagtat---ttagaaaactaagacattcaaaatcattcaagtacacgagagagtctaggaagtcacatgtatgcataggttaagccacatgctgacaaatgtcataagaagaccctacacttttacctt--ggcgaatccctctcctcagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttgtttcggctttaaagaacccagcacgaagccagtctgcatggcctaga-gacatattttgctggataatgattacttgttt-ttctttttgttt s panTro5.chr22 3655253 483 + 37823149 gtctgggg-atatctaaatgactcatgaaaggct--ttt------tttctgtgttgctagaatacagaacagataaggaatggacatttttaagaaact--gcaaggaaacctaacaatccacagatgcttagggcaaaaattagagttt-acacttatagtagatcaccttcagcacagcaagaaaagt-tggagaagagtat---ttcaaaaactaaaacatacaaaatcattcacgtacatgggagagtctagaaagtcacatgtattcataggttaagccacatgctgacaaatgtcataagaagaccctacacttttacctt--ggccgatccctcccctctgtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagcgaacacacactttgtgccggctttaaagaacccatcacaaagccagtctgcatggcctaga-gacatattttgctggacaatgattacttgttt-tcctttttgttt i panTro5.chr22 C 0 C 0 s panPan2.chr7 108532241 487 - 162613886 gtctgggggatacctaaaggactaatgaaaggct--ttt-----ttttctgtgttgctagaatacagaacagataaggaatggacattattaagaaactctgcaaggagacctaacaaaaaacagatgcttagggcaaaaattagagttt-acacatatagtagatcaccttcagcacaggaagaaaagt-tggagaagagtat---ttggaaaactaagacattcaaaatcattcatgtacatgggagagtctagaaagtcacacgtatgcataggttaagccacatgctgacaaatgtcgtaagaagaccctacacttttacctt--ggctgatccttacccccagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttgtgccagcttcaaagaactcagcacaaagccagtctgcatggcctaga-gacatattttcctggataatgattactcgttt-ttctttttgttt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141415 490 + 150013 gtctgggggatacctaaaggactcatgaaaggct--ttttttttttttctgtgttgctagaatacagaacagataaggaatggacattatcaagaaactctgcaaggagacctaacaaaccacggatgcttagggcaaaaattagagttt-acacatatagtagatcaccctcagcacaggaagaaaagt-tggagaagagtat---ttggaaaactaagacattcaaaatcattcacgtacatgggagagtctagaaagtcacatgtatgcataggttaagccacatgctgacaaatgtcataagaagaccctacacttttacctt--ggccgatccctcccctcagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttgtgccggctttaaagaacccagcacaaagccagtctgcatggcctaga-gacatattttgctggataatgattacttgttt-ttc--tttgttt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55782305 483 + 99891981 gtctgggagatacctaaaggacaaatgaaaggct--ttt-----tttgctgtgttgctagaatacagatcagataaggaatggacattattaagaaact---caaggagacctaacaaactacagatgcttagggcaaaaattagagttt-gcacatatagtagatcaccttcagcacaggaagaaaagt-tggagaagagtat---ttggaaaactaagacattcaaaattattcatgtacatgggagagtctagaaagtcacatgtatgcataggttaagccacatgctgacaaatgtcataagaagaccctaca-ttttacctt--ggctgatcccgcccctcagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacaccttgtgccagcttcaaagaacccagcgcaaagccagtctgcatggcctaga-gacatattttgctggataatgattacttgttt-ttctttttgttt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133478001 487 - 185818997 gtctgggagatacctaaaagactaatgaaaggca--ttt-----ttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattagagttt-acacatataatagatcaccttcagcacgggaagaaaagt-tggagaggagtat---ttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagactctacacttttacctt--ggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagcgaacacacactttctgccagcttcaaagggcccagcacaaagccagtctgtgtggcctaga-cacatattttgctggctaatgattacttgttt-ttctttttgttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67307684 487 + 192294377 gtctgggagatacctaaaagactaatgaaaggca--ttt-----ttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattagagttt-acacatataatagatcaccttcagcacgggaagaaaagt-tggagaggagtat---ttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagactctacacttttacctt--ggctgatccctaccctcagtgcaagTTCTGTGCAAGAGTGAACTTGAACTTCACTCAGTGCAAGAGCGAACACACACTTTCTGCCAGCTTCAAAGGGCCCAGCACAAAGCCAGTCTGTGTGGCCTAGA-CACATATTTTGCTGGCTAATGATTACTTGTTT-TTCTTTTTGTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2789553 487 + 3123512 gtctgggagatacctaaaagactaatgaaaggca--ttt-----ttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattagagttt-acacatataatagatcaccttcagcacgggaagaaaagt-tggagaggagtat---ttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccaccagctgacaaatgtcataagaagactctacacttttacctt--ggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagcgaacacacactttctgccagcttcaaagggcccagcacaaagccagtctgcgtggcctaga-cacatattttgctggctaatgattacttgttt-ttctttttgttt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510254 487 + 10077455 gtctgggagatacctaaaagactaatgaaaggca--ttt-----ttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattagagttt-acacatatagtagatcaccttcagcatgggaagaaaagt-tggagaggagtat---ttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagaccctacacttttacctt--ggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttctgccagcttcaaagggcccagcacaaagccagtctgcgtggcctaga-cacatattttgctggctaatgattacttgttt-ttctttttgttt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5715856 487 + 127223203 gtctgggagatacctaaaagactaacgaaaggca--ttt-----ttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattagagttt-acgcatacagtagatcacctgcagcacgggaagaaaagt-tggagaggagtat---ttgcaaaattaagacattcaaaatcattcacgtacatgggagagtctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcgtaagaagaccctacacttttacctt--ggctgatccctaccctcagtgcaagcTCTGTGCAAGAGTGAACTTGAACTTCACTCAGTGCAAGAGTGAACACACACTTTTCGCCAGCTTCAAAGGGCCCAGCACAAAGCCAGTCTGTGTGGCCTAGA-CACATACTTTGCTGGCTAATGATTACTtgttt-ttctttttgttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1182849 487 - 1799296 gtctgggagatacctaaaagactaatgaaaggca--ttt-----ttttctgtgttgctagaatgtagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattagagttt-acacatacagtagatcaccttcagcatgggaagaaaagt-tggagaggagtat---ttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagaccctacacttttacctt--ggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttctaccagcttcaaagggcccagcacaaagccagtctgcgtggcctaga-cacatattttgctggctaatgattacttgttt-ttctttttgttt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1759729 489 + 6934359 gtctgggagatacctaaaagactaatgagaagcattttt-----ttttctgtgttgctagaatgcagaacagataaggaatggacataatgaagaaactctgcaaagagacctaacaaactacagatccttagggcaaaaattagagttt-ccacatatagtagatcaccttcagcatgggaagaaaagt-tggagaggaatat---ttggaaaattaagacatttaaaatcattcccgtaaatgggagagtctagaaagtcacatgtatgcataggttaagccacatgctgacaaacgtcgttagaagaccctacacttttacctt--ggctgatccctaccctcagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacgctttctgccagcttcagagagcccagcacaaagccagtctgcgtggcttaga-cacatattttgctggctaatgattacttgttt-ttctttttgttt i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740309 468 - 18371965 gtctgggggatacctaaaggactaatgagaggca--att-----ttatctgtgctgctagaattcaaaatagataagaaatggacatttttcagaaactgtgcaaggagatccaacaaattacagattcttaggggaaaaattagagttt-acacatgcagtagatcaacttcagcacaggaagaaaagt-tggagaagagtat---ttggaaaattaagacactcaaaatcattcacgtgcataggagagtttagaaattcacatgtatgcacaggttaagccacgagctgacaaatgtcctaaaaggaccctacacttttatctt--ggctgattcctaccctcagtgcaagttcagcataata------------ttca--------aagagtgaacacacatgctgtgccaggttcagacagccctgcacaaagccagtctacctggcctaga-gatatatttttctggataatgtttacttgtttattctttgtgttt i saiBol1.JH378145 C 0 I 3 s cebCap1.NW_016107540v1 1400008 468 + 3566421 gtctgggggatacataaagcactaacgaaaggca--att-----ttctctgtgttgctagaattcaaaatagataaggaatggacattattcagaaactgtgcaaggagatccaacaaattacagattcttaggggaaaaattagagttt-acacatacagtagatcaacttcagcacagaaagaaaagt-tgaagaatagtat---ttggaaaattaagacattcaaaatcattcatgtgcatgggagagtttagaaagtcacacatatgcataggttaagccacaagctgacaaatgtcctaagaggaccctacacttttatctt--ggctgattcctatcttcagtgcaagctcagcataata------------ttca--------aagagtgaacacacacactgtgccaggttcagacagcccagcacaaagccagtctgcctggcctaga-gatatattttgctggataatgtttacttgtttgttctttgtattt i cebCap1.NW_016107540v1 C 0 I 3 s aotNan1.NW_018514471v1 1901599 468 - 9267652 gtctgggggatacctaaagcactaatgaaaggca--att-----ttatctgtgttgctagaattcaaaatagataaggaatggacattattcagagactatgcaaggagagccaacaaattacagattcttagggaaaaaactagagttt-acacatacagtagatcatcttcagcacaggaagaaaagt-tggagaagagtat---ttggaaaattaagacattcaaaatcattcatgtgcataggagagtttagaaattcacatgtatgcataggttaagccacaagctgacaaatgtcctaagaggaccctacacttttatctt--ggctgattcctaccctcagtgcaagctcagcataata------------ttca--------aagagtgaagacacacactgtgccaggttcagacagcccagcacaaagccagtctgcctggcgtaga-gatatattttgctggataatgtttacttgtttattctttgtgttt i aotNan1.NW_018514471v1 C 0 I 28 s canFam3.chr18 51772080 410 - 55844845 gtctgggggctacacaaa-gagtgatgcaaaaca--ttc-----atctctgtgttgcctgaattcaggccaaagaagg-gcaaacattgttcaaaagctc--caaggagacttactca-------atacctgggtcagaagtttgaggttgagatattcagcagagaatctct--cactagagaaaatgcatggcagaaaatattcattgagaacttagcacaccccaaagcactcatatatatgcg-----------------gtgcatatata---taggctacgtgctcacaagtgactcataaagaccctatgcttccagccttgggctggcctgcagactcaatgcaagc--------aaaacaaagttga--------------aagagt--------actgt--------------------aacgcaga-ccaatctacaaagaccggaggatgtattttgttttgttatttttgcttgtt--ttatttttgttt i canFam3.chr18 I 2841 C 0 e ponAbe2.chrUn 66750693 1590 - 72422247 I e calJac3.chr8 108121369 2840 - 128169293 I a score=174703.000000 s hg38.chrUn_KI270749v1 67764 35 + 158759 ttgttgtatttgcc--tgtttgcttagttcctgacat s panTro5.chr22 3655736 35 + 37823149 ttcttgtatttgcc--tgtttgattggttcctgacat i panTro5.chr22 C 0 C 0 s panPan2.chr7 108532728 35 - 162613886 ttgtagtgtttttg--tgtttgcgtagttcctgacat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141905 35 + 150013 ttgttgtatttgcc--tgtttgcttaattcctgacat i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55782788 37 + 99891981 ttgttgtgtttgcttgtgtttgcttagttcctggcat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133478488 37 - 185818997 ttgctgtgtttacctgtgtttgcttagttcctgatat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308171 37 + 192294377 TTGCTGTGTTTACCTGTGTTTGCTTAGTTCCTGATAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790040 37 + 3123512 ttgctgtgtttacctgtgtttacttagttcctgatat i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510741 37 + 10077455 ttgctgtgtttacctgtgtttgcttagttcctgatat i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716343 37 + 127223203 ttgctgtgtttgtctgtgtttgcttagttcctaatat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183336 37 - 1799296 ttgctgtgtttacctgtgtttgcttagttcctgatat i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760218 37 + 6934359 ttgctgtgtttgcctgtgtttgcttagttcctgatac i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740780 18 - 18371965 ttgttgtatttgacagtg------------------- i saiBol1.JH378145 I 3 C 0 s cebCap1.NW_016107540v1 1400479 18 + 3566421 ttgttgtgtttgacagtg------------------- i cebCap1.NW_016107540v1 I 3 C 0 s canFam3.chr18 51772490 36 - 55844845 ttgttgtatatatgtttgtttg-ttagctcttagcct i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66750693 1590 - 72422247 I e aotNan1.NW_018514471v1 1902067 28 - 9267652 I e calJac3.chr8 108121369 2840 - 128169293 I a score=3397579.000000 s hg38.chrUn_KI270749v1 67799 415 + 158759 acaagaaaatcactgtcaaaacattagcttaacatttgtcaaggaaacaaaaagacttcggtgaccacaccttataaagcaaacagttttgt-aaatcactttggaaaatttcagt-----aaaaaaaaaaa-tc----------cttaacaatataataa-----------------gtaaagaaaatttaaaac------cccaaaacatta--------ctgtgtttgtg-----tg-ggggg-gtctgatttacagagtaaccacatagtaattataatt------attataatgcccagttttc-aaaaaaagttccaaggcatacaaagaatgggaaagtgtggctcattcaaaggaaaaaaacaaactgacagagaatatctctaaggaaacccagacttcaaaattactagacaaagactttaaaacaactctcttaattatactcaaatgtcacaaggaaaacataaa s panTro5.chr22 3655771 411 + 37823149 acaagaaaatcactgtcaaaactttagcttgacatttgttatggaaacaaaaagacttcggtgac---accttataaagcaaacagttttgt-aaatcactttggaaaatttcact-----aaaaaaaaaaaatc----------cttaacaatataataa-----------------gtaaagaaaatttaaaac------cacaaaacatta--------ctgtgtttgta--------ggggt-gtctgatttacagagtaaccacatagtaattataatt------attataatgtacagttttc-aaaaaaagttacaaggcatacaaagaatgggaaagtatggctcattcaaaggaacaaaacaaattgacagagaatatctctaagggaactcagacatcaaacttactagacaaagactttaaaacaactctcttaattatactcaaatgtcaaaaggaaaacataaa i panTro5.chr22 C 0 C 0 s panPan2.chr7 108532763 417 - 162613886 acaagaaaatcactgtcaaaacattagcttaacatttgttaaggaaacaaaaagacttcagtgaccacaccttataaagcaaacagttttgtaaaatcactttggaaaatttcact-----aaaaaaata----c----------cttaacaatataataa-----------------gtaaataaaatttaaaac------cacaaaacgtta--------gtgtgtttgtggg-gggg-ggggt-gtctgatttacagagtaaccacatagtaattataatt------ataataatgtccagttttc-aaaaaaagttacaaggcatacaaagaatgggaaagtatggctcattcaaaggaacaaaataaactgacagaaaatatctctaaggaatcccagacatcaaacttactagacaaagactttaaaacaactctcttaattataatcaaatgtcaaaaggaaaacataaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141940 413 + 150013 acaagaaaatcactgtcaaaacattagcttaacatttgttaaggaaacgaaaagacttcggtgaccacaccttataaagcaaacagttttgt-acatcactttggaaaatttcact-----aaaaataaaaa--c----------cttgagaatataataa-----------------gtaaataaaatttaaaac------cacaaaacatta--------gtgtgtttgtg------g-ggggg-gtctgatttacagagtaaccacatagtaattataatt------attataatgtccagttttc-aaaaaaagttacaaggcatacaaagaacgggaaagtatggctcattcaaaggaacaaaacaaactgacagaaaatatctctaaggaaacccagacttcaaacttactagagaaagactttaaaacaactctcttcattatactcaaatgtcaaaaggaaaacataaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55782825 413 + 99891981 acaagaaaatcactgtcaaaatattagcttaacatttgttaaggaaacaaaaagacttcagtgaccacaccttataaagcaaacagttttgtaaaatcactttggaaaatttcact-----aaaaaaaaaa---c----------cttaacaatataataa-----------------gtaaataaaatttaaaac------cacaaaacatta--------gtgtgtttgta-----gg-ggagg-gtctgatttacagagtaaccacatagtaattataatt------attataatgtccagttttc--aaaaaagttatgaggcataccaagaatgggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctctaaggaaacccagacatcaaacttactagacaaagactttaaaacaactctcttaattatactcaaatgtcaaaaggaaaacataaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133478525 414 - 185818997 agtagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaatgacttcagtgatcacaccttatagagcaagcagttttgtaaaatcactttggaaaatttcact----aaaaaaaactaa--c----------cttaacaatataataa-----------------gtaaataaaaattaaaat-------aaaaaacatca--------gtatgtttgtt-----gg-ggggg-gactgatttacagagtaaccacatagtaattataatt------attataatgtccagttttc-aaaaaaagttacaaagcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctataaggaaacccagacatcaaacttactagacaaagactttataacaactctcttaattatactcaaatgtcaaaaggaaaacataaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308208 414 + 192294377 AGTAGAaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaatgacttcagtgatcacaccttatagagcaagcagttttgtaaaatcactttggaaaatttcact----aaaaaaaactaa--c----------cttaacaatataataa-----------------gtaaataaaaattaaaat-------aaaaaacatca--------gtatgtttgtt-----gg-ggggg-gactgatttacagagtaaccacatagtaattataatt------attataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctataaggaaacccagacatcaaacttactagacaaagactttataacaactctcttaattatactcaaatgtcaaaaggaaaacataaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790077 409 + 3123512 agtagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaatgacttcagtgatcacaccttatagagcaagcagttttgtaaaatcactttggaaaatttcact----aaaaaaaactaa--c----------cttaacaatataataa-----------------gtaaataaaaattaaaat------aaaaaaacatta--------gtatgtttgtt-----gg-ggggg-gactgatttacagagtaaccacatag------taatt------attataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctataaggaaacccagacatcaaacttactagacaaagactttataacaactctcttaattatactcagatgtcaaaaggaaaacataaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510778 421 + 10077455 agaagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaaagacttcagtgatcacaccttatagagcaaacagttttgtaaaatcactttggaaaatttcact----aaaaaaaactaa--c----------cttaacaatataataa-----------------gtaaataaaatttaaaat------aaaaaaacatta--------gtgtgtttgtg-----gg-gggtg-gtctgatttacagagtaaccacatagtaattataattattataattataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctctaaggaaacccagacatcaaacttactagacaaagactttataacagctctcttaattatactcaaatgtcaaaaggaaaacataaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716380 419 + 127223203 acaagaaaatcactgtc-aaattttagcttaacattagttaaggaaacaaaaagacttcagtgatcacaccttataaagcaaacagttttgtaaaatcactttggaaaatttcact-----aaaaaaactaa--c----------cttaacaatataataa-----------------gtaaataaaattttaaat------caagaaacgtta--------gtgtgtttgta-----gg-gggagagtctgatttacagagtaaccacatagtaattataattattataattataacgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaaatatgcctcattcaaaggaacaaaataaattgacagaaaatatctctaaggaaacccagatatcaaacttactagacaaagactttataacaa--ctcttaattatactcaaatgtcaaaaggaaaacataaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183373 421 - 1799296 agaagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaaagacttcagtgatcacaccttatagagcaaacagttttgtaaaatcactttggaaaatttcact----aaaaaaaactaa--c----------cttaacaatataataa-----------------gtaaataaaatttaaaat------aaaaaaacatta--------gtgtgtttgtg-----gg-gggtg-gtctgatttacagagtaaccacatagtaattataattattataattataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctctaaggaaacccagacatcaaacttactagacaaagactttataacagctctcttaattatactcaaatgtcaaaaggaaaacataaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760255 417 + 6934359 agaagaaaatcactgtc-aaataatagcttaacattagttaaagaaacaaaaagacttcagtgatcacaccttatagagcaaacagttttgtaaaatcactttggaaaatttcact-----aaataaattaa--c----------cttaacaatatattaa-----------------gtaaataaaatttaaaat------caaaaaatgtta--------gtgtgtttgtg-----gg-ggg---gtctgatttacagagtaaccacatagtaattataattactataattataatgtccagttttc--aaaaaagttacaaggcatacaaagaatgggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatatctaaggaaacccagacatcaaacttactagacaaagactttctaacaactctcttaattatactcaaatgtcaaaaggaaaacataaa i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740798 428 - 18371965 acaaagaaatcactgtcaaaacattagtttaacattagtcaaggaaacaaaaagacttcagtgaacacaccttataaagtaaacagttttgtagaatcagcttggaaaacttcagt----aaaaaaaatcca--c----------cttaaaaatacaataa-----------------gtaaatggaatttaaaat------cacaaaatgttagagaatgtgtgtgtttgta-----gg-gga---gtctgctttaaagagtaaccacatagtaattataattattacaattataatgtgcggctttc-aaaaaaaatcacaaggcatacaaagaatggaaaagtatgggtcattcaaaggaataaaataaatagacataaaatatctctaaggaagcccagacatcaaactgactaggcaaaggttttgaaaccactttctttattatactcaaatgtctaaagaaaaacataaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1400497 433 + 3566421 acaaagaaatcactgtcaaaacattagcttaacattagttaaggaaacaaaaagatttcagtgaacacaccctataaagtaaacagttttgtataatcagcttggaaaacttcactaaaaaaaaaaaattaa--c----------cttaaaaatataacaa-----------------gtaaatagaatttaaaac------cacaaaatgttagagaatgtgtgtgtttgta-----gg-ggg---gtctgctttaaagagtaaccacatagtaattataattattataattataacatacagctttcaaaaaaaaatcacaagacatacaaagaatggaaaagtatgggtcattcaaaggaataaaataaatagacataaaatatctctaaggaagcccagacatcaaacttactaggtaaagattttgaaaccactttcttaattatgctcaaatgtctaaagaaaaacataaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1902095 432 - 9267652 acaaagaaatcgctgtcaaaacattagcttaacattagttaaggaaacaaaaagaccttggtgaacacatcctataaagtaaacagttttgtagaatcagcttggaaaacttgact-aaaaaaaaaaattaa--c----------cccaaaaatataataa-----------------gtaaatagaatttaaaac------cacaaaatgttatagaatgtgtatgtttgtt-----ggaggg---gtctgctttaaagagtaatcacacagcaattataattcttataattataatgtgcagctttc-aaaaaaaatcacaaggcatacaaagaatggaaaagtatgggtcattcaaaggaataaaataaatagacttaaaatgtctctaaagaagcccagatatgaaacttactaggcaaagattttgaaaccactttcttaattatactcaaatgtctaaagaaaaacataaa i aotNan1.NW_018514471v1 I 28 C 0 s canFam3.chr18 51772526 442 - 55844845 acaaggaaatctctgtcaaaacattagctgaacatgagttaaaggaacaaaaaa--ttcagtggtcacactatacaagaaatacaattttacaaacgttgtctggaaaattccact-----aaacaaatagg--ctgctatggttcttaacaatgaagcaaaacaaaaatacacccacacaaatgaaa--taaaacaagacaaacaaaaactta--------acaaatcctaaggaaggg-ggaga-atctgatttctagaatagccacattataat-------------attcaattgttcagttttt-gacaaaaatcatgaggcatacgaagaaaaaatatatatagcccattcataggaacaaattaaattgacaaaaagtgcccttgaagatgcccatacatcaaacttactagactaagactttaaaatcacgggcttaaatatgctcaaagggctaaaggaaaacatgag i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66750693 1590 - 72422247 I e calJac3.chr8 108121369 2840 - 128169293 I a score=178022.000000 s hg38.chrUn_KI270749v1 68214 25 + 158759 caaagaaataaaggattcag-aaaaa------ s panTro5.chr22 3656182 25 + 37823149 caaagaaataaaggaatcag-aaaaa------ i panTro5.chr22 C 0 C 0 s panPan2.chr7 108533180 26 - 162613886 tgaagaaataaaggaatcagaaaaaa------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142353 25 + 150013 caaagaaataaaggaatcag-aaaaa------ i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55783238 25 + 99891981 caaagaaataaaggaatcag-aaaaa------ i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133478939 24 - 185818997 caaagaaataaaggaattag-aaaa------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308622 24 + 192294377 caaagaaataaaggaattag-aaaa------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790486 24 + 3123512 caaagaaataaaggaattag-aaaa------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511199 24 + 10077455 caaagaaataaaggaattac-aaaa------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716799 24 + 127223203 caaagaaataaaggaattag-aaaa------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183794 24 - 1799296 caaagaaataaaggaattag-aaaa------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760672 24 + 6934359 caaagaaataaaggaattag-aaaa------- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124209 17 - 128169293 caaaaaaaaaa-------aa-aaaa------- i calJac3.chr8 I 2840 I 2 s saiBol1.JH378145 741226 20 - 18371965 caaagaaagga----atcag-aaaa------- i saiBol1.JH378145 C 0 I 2 s cebCap1.NW_016107540v1 1400930 24 + 3566421 caaagaaataaaggaatcag-aaaa------- i cebCap1.NW_016107540v1 C 0 I 2 s aotNan1.NW_018514471v1 1902527 22 - 9267652 caaagaaataaaggaatc---aaaa------- i aotNan1.NW_018514471v1 C 0 I 2 s canFam3.chr18 51772968 30 - 55844845 aatagaaatgagggaatcag-aaaa-caacag i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66750693 1590 - 72422247 I a score=13923.000000 s hg38.chrUn_KI270749v1 68239 1 + 158759 a s panTro5.chr22 3656207 1 + 37823149 a i panTro5.chr22 C 0 C 0 s panPan2.chr7 108533206 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142378 1 + 150013 a i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66752283 1 - 72422247 a i ponAbe2.chrUn I 1590 I 25 s nomLeu3.chr17 55783263 1 + 99891981 a i nomLeu3.chr17 C 0 I 1 s rheMac8.chr3 133478963 1 - 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308646 1 + 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790510 1 + 3123512 a i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511223 1 + 10077455 a i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716823 1 + 127223203 a i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183818 1 - 1799296 a i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760696 1 + 6934359 a i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124228 1 - 128169293 a i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 741248 1 - 18371965 a i saiBol1.JH378145 I 2 C 0 s cebCap1.NW_016107540v1 1400956 1 + 3566421 a i cebCap1.NW_016107540v1 I 2 C 0 s aotNan1.NW_018514471v1 1902551 1 - 9267652 a i aotNan1.NW_018514471v1 I 2 C 0 s canFam3.chr18 51772998 1 - 55844845 a i canFam3.chr18 C 0 C 0 a score=211014.000000 s hg38.chrUn_KI270749v1 68240 23 + 158759 tattaaaatgtaggaatatcaac s panTro5.chr22 3656208 23 + 37823149 tatttaaaagtaggaatatcaac i panTro5.chr22 C 0 C 0 s panPan2.chr7 108533207 23 - 162613886 tgttaaaaagtaagaatatcaac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142379 23 + 150013 tattaaaaagcaggaatatcaac i gorGor5.CYUI01000341v1 C 0 I 2 s nomLeu3.chr17 55783265 23 + 99891981 tattaaaaagtaagaatatcaac i nomLeu3.chr17 I 1 C 0 s rheMac8.chr3 133478964 23 - 185818997 tatgaaaaagtaagaatatcaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308647 23 + 192294377 tatgaaaaagtaagaatatcaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790511 23 + 3123512 tatgaaaaagtaagaatatcaag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511224 23 + 10077455 tatgaaaaagtaagaatatcaag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716824 23 + 127223203 tatgaaaaagtaagaatatcaag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183819 23 - 1799296 tatgaaaaagtaagaatatcaag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760697 23 + 6934359 tatgaaaaagtaagaatatcaag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124229 23 - 128169293 tacggaaaactaagaatatcaac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 741249 23 - 18371965 tatgaaagagtaagaatatcaac i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1400957 23 + 3566421 tatgaaagagtacgaatatcaac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1902552 23 - 9267652 tatggaagactaagaatatcaac i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51772999 23 - 55844845 gaaagaaaaatgagaataccaac i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66752284 25 - 72422247 I a score=13923.000000 s hg38.chrUn_KI270749v1 68263 1 + 158759 a s panTro5.chr22 3656231 1 + 37823149 a i panTro5.chr22 C 0 C 0 s panPan2.chr7 108533230 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142404 1 + 150013 a i gorGor5.CYUI01000341v1 I 2 C 0 s ponAbe2.chrUn 66752309 1 - 72422247 a i ponAbe2.chrUn I 25 I 147 s nomLeu3.chr17 55783288 1 + 99891981 a i nomLeu3.chr17 C 0 I 2 s rheMac8.chr3 133478987 1 - 185818997 a i rheMac8.chr3 C 0 I 2 s macFas5.chr3 67308670 1 + 192294377 a i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 2790534 1 + 3123512 a i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 2511247 1 + 10077455 a i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 5716847 1 + 127223203 a i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 1183842 1 - 1799296 a i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 1760720 1 + 6934359 a i colAng1.NW_012115910v1 C 0 I 2 s calJac3.chr8 108124252 1 - 128169293 a i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 741272 1 - 18371965 a i saiBol1.JH378145 C 0 I 2 s cebCap1.NW_016107540v1 1400980 1 + 3566421 a i cebCap1.NW_016107540v1 C 0 I 2 s aotNan1.NW_018514471v1 1902575 1 - 9267652 a i aotNan1.NW_018514471v1 C 0 I 2 s canFam3.chr18 51773022 1 - 55844845 a i canFam3.chr18 C 0 I 2 a score=1208233.000000 s hg38.chrUn_KI270749v1 68264 143 + 158759 gagatag---------------------cagaaattctggagtggaaaactacaacgataaaaatttcaaaatcaccagagggatttaag--agtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgaga------------aacag s panTro5.chr22 3656232 143 + 37823149 gagacag---------------------cagaaattctggagtggaaaactacaatgataaaaatttaaaaatcaccagagggatttaag--agtatatttgc-acatagagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgaga------------aacag i panTro5.chr22 C 0 C 0 s panPan2.chr7 108533231 155 - 162613886 aagagat---------------------aacaatttctggagttgaaaactacagtgataaaaattttaaaatcaccagagggatttaag--agtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgagaaatagaaaaaataacaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142405 155 + 150013 gagataa---------------------cagaaattctggagtggaaaactacaatgataataattcaaaaatcaccagagggatttcag--agtatatttgc-acacacagaagaagtcatgaacttgaagataagaaaatggaaaatactgactctgagaaacagaaagaatatcaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55783291 142 + 99891981 gagataa---------------------cagaag-tctggagttgaaaactacaatgataaaaatttaaaaatcaccagagggattcaag--agtatatttgc-acacacagaagaagtcatgagctagaagataagaaaatggaaaatattgactctgaga------------aacag i nomLeu3.chr17 I 2 C 0 s rheMac8.chr3 133478990 142 - 185818997 gagata----------------------cagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccagagggattcaag--agtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgaca------------aacag i rheMac8.chr3 I 2 I 12 s macFas5.chr3 67308673 142 + 192294377 gagata----------------------cagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccagagggattcaag--agtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgaca------------aacag i macFas5.chr3 I 2 I 12 s macNem1.NW_012011522v1 2790537 142 + 3123512 gagata----------------------cagtaattctagaactgaaaacaacaataataaaaattttaaaatcaccagagggattcaag--agtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgaca------------aacag i macNem1.NW_012011522v1 I 2 I 12 s cerAty1.NW_012000909v1 2511250 140 + 10077455 gagata----------------------cagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccaaagggattcaag--agtatatttgc-acacacagaagaagccatgagcttgaagataagaaaatggaaaatattga--ctgaga------------aacag i cerAty1.NW_012000909v1 I 2 I 12 s chlSab2.chr21 5716850 142 + 127223203 gagata----------------------cagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccagagggattcaag--agtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgaga------------aacag i chlSab2.chr21 I 2 I 12 s manLeu1.NW_012105809v1 1183845 140 - 1799296 gagata----------------------cagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccaaagggattcaag--agtatatttgc-acacacagaagaagccatgagcttgaagataagaaaatggaaaatattga--ctgaga------------aacag i manLeu1.NW_012105809v1 I 2 I 12 s colAng1.NW_012115910v1 1760723 142 + 6934359 gagata----------------------cagtaattctagaactgaaaacaacaatgatacaaatttaaaaatcaccagagggattcaag--agtatatttgc-acaggcagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgaga------------aacag i colAng1.NW_012115910v1 I 2 I 12 s calJac3.chr8 108124255 140 - 128169293 gagata----------------------cagaaattctggagctgaaaaatacaatgccaaaaataaaaaattcaccagagggactcaag--agtctatttgtgacacag---aaaagtcatgagcttgaagataagaaaatagaaaatactgactctgaga------------aacag i calJac3.chr8 I 2 I 12 s saiBol1.JH378145 741275 133 - 18371965 gagata----------------------cagaaattctggagctgaaaactacaatgacaaaaataaaaaatgcaccagagggattcaag--agtctatttgcaacccac---agaagtcatgagcttgaagat-----aatagaaaatattga--ccgaga------------aacag i saiBol1.JH378145 I 2 I 12 s cebCap1.NW_016107540v1 1400983 141 + 3566421 gagata----------------------cagaaattttggagctgaaaactacaatgacaaaactaaaaaatgcaccagagggattcaag--agtctatttgcgacccacagaagaagtaatgagattgaagataagaaaataggaaatatcga--ctgaaa------------aacag i cebCap1.NW_016107540v1 I 2 I 12 s aotNan1.NW_018514471v1 1902578 141 - 9267652 gagata----------------------cagaaattctggagctgaaaactacaatgacaaaaataaaaagctcaccagagggattcaag--agtctatttgcgacacag--aagaagtcatgagcttgaagataagaaaatagaaaatattgactctgaga------------aacag i aotNan1.NW_018514471v1 I 2 I 12 s canFam3.chr18 51773025 151 - 55844845 gagatagaaatcataaaaaatgaacaaatagaaatttcggagctgaaatctatgatagaggaaaataaaaatgcatca----gatctgagctggtggattaac-actt----------caatgaacttaaaggtaagaccatgggagtaacaaaatctgact------------aatg- i canFam3.chr18 I 2 C 0 e ponAbe2.chrUn 66752310 147 - 72422247 I a score=13923.000000 s hg38.chrUn_KI270749v1 68407 1 + 158759 a s panTro5.chr22 3656375 1 + 37823149 a i panTro5.chr22 C 0 C 0 s panPan2.chr7 108533386 1 - 162613886 a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142560 1 + 150013 a i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66752457 1 - 72422247 a i ponAbe2.chrUn I 147 I 630 s nomLeu3.chr17 55783433 1 + 99891981 a i nomLeu3.chr17 C 0 I 12 s rheMac8.chr3 133479144 1 - 185818997 a i rheMac8.chr3 I 12 C 0 s macFas5.chr3 67308827 1 + 192294377 a i macFas5.chr3 I 12 C 0 s macNem1.NW_012011522v1 2790691 1 + 3123512 a i macNem1.NW_012011522v1 I 12 C 0 s cerAty1.NW_012000909v1 2511402 1 + 10077455 a i cerAty1.NW_012000909v1 I 12 C 0 s chlSab2.chr21 5717004 1 + 127223203 a i chlSab2.chr21 I 12 C 0 s manLeu1.NW_012105809v1 1183997 1 - 1799296 a i manLeu1.NW_012105809v1 I 12 C 0 s colAng1.NW_012115910v1 1760877 1 + 6934359 a i colAng1.NW_012115910v1 I 12 C 0 s calJac3.chr8 108124407 1 - 128169293 a i calJac3.chr8 I 12 C 0 s saiBol1.JH378145 741420 1 - 18371965 a i saiBol1.JH378145 I 12 C 0 s cebCap1.NW_016107540v1 1401136 1 + 3566421 a i cebCap1.NW_016107540v1 I 12 C 0 s aotNan1.NW_018514471v1 1902731 1 - 9267652 a i aotNan1.NW_018514471v1 I 12 C 0 s canFam3.chr18 51773176 1 - 55844845 a i canFam3.chr18 C 0 C 0 a score=1014148.000000 s hg38.chrUn_KI270749v1 68408 116 + 158759 t---------------aaaaaat-gagcagagactaaggaatctgtgggacatcatcaaatagaccaacattcatattctag---gaTAAATTATGTTGTTGAAAACTTTAGCAT--tctttc-ttttcacctttctt s panTro5.chr22 3656376 119 + 37823149 t---------------gaaaaat-gagcagagactaaggaatttgtgagacatcatcaaatagaccaacattcatattctagaaGGATAAATTATGTTGTTGAAAACTTTAGCAT--TCTTTC-TTTTCACCTTTCTT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108533387 119 - 162613886 t---------------aaaaaat-gaacagagactaaggaatctgtgggacaacatcaaatagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACTTTACCAT--tctttc-ttttcacctttctt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142561 119 + 150013 t---------------aaaaaat-gagcagagactaaggaatctgtgggacatcatcaaatagaccaacattcatattctagaaGGATAAATTATGTTGTTGAAAACTTTAGCAt--tctttc-ttttcacctttctt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55783446 107 + 99891981 t---------------aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaatagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACGTTACCAT--TCTTtc-tt------------ i nomLeu3.chr17 I 12 C 0 s rheMac8.chr3 133479145 120 - 185818997 t---------------aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACTTTACCAT--TCTTTCTTTTTCACCTTTCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308828 120 + 192294377 t---------------aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACTTTACCAT--TCTTTCTTTTTCACCTTTCTc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790692 119 + 3123512 t---------------aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACTTTACCAt--tctttc-ttttcacctttctc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511403 120 + 10077455 ta--------------aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagcccaacattcatattCTAAAAGGATAAATTACGTTGTTAAAAACTTTACCAT--tctttc-ttttcacctttctt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717005 119 + 127223203 t---------------aaaaaaa-gaacagagactaaggaatctgtgggatatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTATTAAAAACTTTACCAT--tctttc-ttttcacctttctt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183998 120 - 1799296 t---------------aaaaaaatgaacagagactaaggaatctgtgggacatcatcaaaaagcccaacattcatattCTAAAAGGATAAATTACGTTGTTAAAAACTTTACCAt--tctttc-ttttcacctttctt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760878 116 + 6934359 ta--------------aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATCAATTATGTTGTTAAAAACTTTACCAT--tctttg-ttttcacctt---- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124408 121 - 128169293 t---------------aaaaaat-gaacagagactatggaatctgtgggacatcaagaaatagaccaacatTCAAATTCAAAACCAATAAATTCTGTTGTTAAAAACTTTAACATTCTTTTTT-TTATCACctttctt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 741421 118 - 18371965 t----------------aaaaat-gaacagagactgaagaatctgtggcacattaggaaacagaccaacattcatattCAAAAATGCAAAATTCTATTGTTAAAAACTTTAACAG--TTATTG-TTATCACCCTTCTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1401137 118 + 3566421 t---------------aaaaaat-gaacagagactgaggaatctgtggcacatcaagaaatagaccaacattcatattCAAAAATGAAAAATTATATTGTTAAAAACTTTAACA---TTCTTT-TTATCACCTTTCTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1902732 119 - 9267652 t---------------aaaatat-gaagagagactaaggaatctgtgggatatcaagaagtagaccaacattcatattCAAAAACAATAAATTCTATTGTTAAAAACTTTAACAt--tctttt-ttatcatctttctt i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51773177 97 - 55844845 -cagaaacagggatgaaggaagt-taacagagtctaagtgacctctgggatatcatcaagATG--------TCACCTCCCA----------------------------CATTCT--TCTTTC-TTTTTAATTATCTC i canFam3.chr18 C 0 I 437 e ponAbe2.chrUn 66752458 630 - 72422247 I a score=1908713.000000 s hg38.chrUn_KI270749v1 68524 224 + 158759 ----cctccctctccctcctcctc---tttacttttcttcctcttcctttctcttcttctttctctccttcattatccctttcactctgtttctc--tttctccctttctctttt-ttcttttctttcaattttctCCATTACTAAGAGATGTTTAAATACCCTTACCATGTGAGTTGATATGGTTATT-TCTCCGTTTAATCCTCTTTTGAGATTTACAGTC-ACTCTAAGTAAA s panTro5.chr22 3656495 230 + 37823149 tcttcctccctccccctcctcctcctTtttacttttcttgctcttccttgctcttcttctgtctctccttcattatccctttcgctctgtttctc--tttctccctttctctttt-ttcttttctttcaattttctCAATTACTAAGAGATGTTTAAATACCCTTACCATGTTAGTTGATATGGTTATT-TCTCC-TTTAGTTCTCTTTTGAGATTTATAGTC-ACTCTAAGTAAA i panTro5.chr22 C 0 C 0 s panPan2.chr7 108533506 224 - 162613886 tcttcctccctccccct-ctcctcctttttatttttcttcctcttcctttctcttcttctttctctccttcattatccctttcactctgtttctc--tctctcc------ctctT-TTTTTTGCTTTCAATTTTCTCAATTACTAAGAGATGTTTAAATACCCTTACTGTGTTAGTAGATATGGTTATT-TATCCCTTTAGTTCTCTTTTGAGATTGATAGTC-ACTCTAAGTAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142680 225 + 150013 tcttcctccctccccctcctacacctttttacttttcttcctcttcctttctcttct----tctctccttcattatccctttcgctctgtttctc--tttctcccttt--ctttt-gtcttttctttcaattttctCAATTACTAAGAGATGTTTAAATACCCTTACCATGTTAGTAGATATGGTTATT-TCTCCCTTTAGTTCTCTTTTGAAATTTATAGTC-ACTCTAAGTAAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55783553 225 + 99891981 ----cctccctccccttcctcctcctttttacttttcttcctcttcctttctcttcttctttctctctttcattatcccttttgctctgtttctc----tctccctttctctttt-ttcttttctttcaattttctCAATTACTAAGAGATGTTTAAATACCCTTACTGCATTAGTAGATATGGTTATT-TCTCCCTTTAGTTCTTTTTTGAGATTTATAGTC-ACTTTAAGTAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133479265 233 - 185818997 TCTTCCTCCCTCTCCTCCTTCCTCCttcttactttttttcctcttcctttctcttcttctttctctccttcattatcccttttgctctgtttctctctccctccctttctctttt-ttcttttctttCAATTTTCTCAATTACTAAGAGATGTTTAAATACCCTTACCGTGTTAGTAGATATAGTTATT-TCTCCCTTCATTTCTCTTTTGAGATTTATCATC-ACTTTAAGTATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308948 233 + 192294377 tcttcctccctctcctccttcctccttcttactttttttcctcttcctttctcttcttctttctctcctTCATTATCCCTTTTGCTCTGTTTCTCTCTCCCTCCCTTTCTCTTTT-TTCTTTTCTTTCAATTTTCTCAATTACTAAGAGATGTTTAAATACCCTTACCGTGTTAGTAGATATAGTTATT-TCTCCCTTCATTTCTCTTTTGAGATTTATCATC-ACTTTAAGTATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790811 233 + 3123512 tcttcctccctctcctccttcctccttctttctttttttcctcttcctttctcttcttctttctctccttcattatcccttttgctctgtttctctctccctccctttctctttt-ttcttttctttcaattttctCAATTACTAAGAGATGTTTAAATACCCTTACCGTGTTAGTAGATATAGTTATT-TCTCCCTTCATTTCTCTTTTGAGATTTATCATC-ACTTTAAGTATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511523 233 + 10077455 tcttcctccctctccctcgtcctccttctttcttttcttcctcttcctttctcttcttctttctctccttcattatcccttttgctccgtttctctctctctccctttctctttt-ttcttttctttcaattttctCAATTACTAAGAAATGTTTAAATACCCTTACCATGTTAGTAGATATAGTTATT-TCTCCCTTCAGTTCTCTTTTGAGATTTATAGTC-ACTTTAAGTATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717124 230 + 127223203 tcttcttccctctccctagtcctcctca---cttttcttcctcttcctttctcttcttctttctctctttcattatcccttttgctccgtttctctctctctccctttctctttt-ttcttttctttcaattttctCAATTACTAAAAAATATTTAAATACCCTTACCATGTTAGTAGATATAGTTATT-TCTCCCTTCAGTTCTCTTTTGAGATTTATAGTC-ACTTTAAGTATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184118 233 - 1799296 tcttcctccctctccctcgtcctccttctttcttttcttcctcttcctttctcttcttctttctctccttcattatcccttttgctccgtttctctctctctccctttctctttt-ttcttttctttcaattttctCAATTACTAAGAAATGTTTACATACCCTTACCATGTTAGTAGATATAGTTATT-TCTCCCATCAGTTCTCTTTTGAGATTTATAGTC-ACTTTAAGTATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760994 233 + 6934359 tcttcctccctctccctcgtcctccttcttatttttcttcctcttcctttctcttcttctttctctccttcattatcccttttgctctgtttctctgtctctccctttctctttt-ttcttttctttcaattttctCAATTACTAAGAGATGTTTAAATACCCTTACTGTGTTGGTAGATATGGTTATT-TCTCCCTTCAGTTCTCTTTTGAGATTCATAGTC-ACTTTAAGTATA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124529 224 - 128169293 tcttcctctatctc---cctcctcttccttaattttcttcctcttcctttctcttctt---tctctccctcattatcc----ctctctgtttttt--tctttccctttctctttttttctttACTTTAAATTTTCTCAATATCTAAGAGATGTTTAAATACTTTTACTGTGTTAGTAGATACGGTTTTTCTCTGTCTTCAGGTCCCTTTTGAGATTGATACTCAACTCTGAGTAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 741539 227 - 18371965 TCTTCCTCCATCCC-CTCCTCTTCCTTCTTAATTTTCTTCCtcttcctttctcttctt---tctctccttcattatccc--tctctctgtttttt--tctttctctttctcttttattctttactttcAGTTTTCGCAATTACTAAGAGATGTTTAAATACTTTTACTGTGTTAGTAGATACGGTTATT-TCTCTCTTTAGGTCCTTTTTGTGATTGATACTCAACTCTGAGTAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1401255 226 + 3566421 tcttcctccatccccctcctcttccttcttaattttcttcctcttcctttctcttctt---tctccccttcattatccc--tctctctgtttttt--tctttccctttctcttttattctttactttcaatttTCTCAATTACTAAGAGATGTTTAAATACTTTTAC--TGTTAGTAGATATGGTTATT-TCTCTCTTTAGGTCCCTTTTGTGATTGATACTCAACTCTGAGTAAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1902851 225 - 9267652 tcttcctccatcttcctcctcttccttcttaattttcttcctcttcctttctcttctt---tctctccttcattatcc----ctctctg-ttttt--tctttccctttctctttttttctttactttcaattttctCAATTGCTAAGAGATGTTTAAATACTTTTACTGTGTTAGCAGATATGATTATT-TCTCTCTTCAGGTCCCTTTTGAGATTGATACTCAACTCTGAGTAAA i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66752458 630 - 72422247 I e canFam3.chr18 51773274 437 - 55844845 I a score=969497.000000 s hg38.chrUn_KI270749v1 68748 114 + 158759 GAGATTACCCAAACATAAGCCTCACAAACAGGCTTCCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGATGTATTAACTTTCTGATGCTTTTAAGG-----------ATGTTTTAT-AACA----------------- s panTro5.chr22 3656725 110 + 37823149 GAGATAACCCAAACATAAGCCTCACA----GACTTCCATACCATTCTTAATTTGG---TCCTATAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------ATGTTTTAT-AACA----------------- i panTro5.chr22 C 0 C 0 s panPan2.chr7 108533730 114 - 162613886 GAGATAATCCAAAAATAAGCCTCACAAACAGGCTTCCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------ATGTTTTAT-AACA----------------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142905 114 + 150013 GAGATAACCCAAACATAAGCGTCACAAACAGGCTTGCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------ATCTTTTAT-AACA----------------- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55783778 114 + 99891981 GAGATAACCCAAACATAAGCCTCACAAACAGGCTTACATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTATATTAACTTTCTGACACTTTTAAGG-----------ATGTTTTAT-AACA----------------- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133479498 115 - 185818997 GAGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TTCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------CTTTTTTTTAAACA----------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309181 115 + 192294377 GAGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TTCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------CTTTTTTTTAAACA----------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2791044 115 + 3123512 GAGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCCTTCTTAATTTGG---TTCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------CTTTTTTTTAAACA----------------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511756 116 + 10077455 AAGATAACCCAAACATATGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG----------ATTTTTTTTTTAACA----------------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717354 114 + 127223203 AAGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATGGCTGTATTAACTTTCTGATGCTTTTAAGG-----------ATTTTTTTT-AACA----------------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184351 115 - 1799296 AAGATAACCCAAACATATGGCTCACAAACAGACTTCCAAACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------ATTTTTTTTAAACA----------------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761227 114 + 6934359 GAGATAACCCAAGCATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTCGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------A-TTTTTTTAAACA----------------- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124753 116 - 128169293 GAGATAACCCAAATATAAGAATCATAAACAGACGTCCATACCATTCTTAATCTTGTAATTCTTCATTGCTTCACTGTTCTATTAACATTCTGATGC-TTTAAGA-----------ATGTTTTAT-AAAA----------------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 741766 116 - 18371965 GAAATAATCCAAATGTAAGAATCATAAACAGGCTTCCATTCCATTCTTAATCTTGTAATTCTTCATTGCTTCATTGTTGTGTTAACTTTCTGATGC-TTTAAGA-----------ATGTTTTAT-AAAA----------------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1401481 116 + 3566421 GAGATAATCCAAATATAAGAATCATAAACAGGCTTCCATACCATTCTTAATCTTGTAATTCTTTGTTGCTTCATTGTTGTATTAACTTTCTGATGC-TTTAAGA-----------ATGTTTTAT-AGAA----------------- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1903076 116 - 9267652 GAGACAACCCAAATATAAGAATCATAAACAGGCTTCCATATCATTCTTAATCTTGTAATTCTTCATTGCTTCATTGTTGTATTAACTTTCTGATGC-TTTAAGA-----------ATGTTTTAT-AAAA----------------- i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51773711 142 - 55844845 aagctgacccagataTCAGACTCACCTACAGGTTTCCATACCCTCCCTAATCTTG--ATCCTATAACTCTGCAGTGCTTTATT-GCTCAGTGTTGCTTTCATAAACATTGTTTTAAtttttttt-aagatttatttattcatgaga i canFam3.chr18 I 437 I 158 e ponAbe2.chrUn 66752458 630 - 72422247 I a score=1869498.000000 s hg38.chrUn_KI270749v1 68862 184 + 158759 AATTGTTTAGTTTTTTCCACTGGAATGTTTATTCTGAATTATCTAATTCATATTGTAAATATAGAGGGAG-TTTAATATAAAATTATTAAACTAATATTTATGAAAGAACGTatttgtgcatttaacaaatatgttaatcctcagactgttattgggcagctgagcatacagcaataaaaataac s panTro5.chr22 3656835 184 + 37823149 AATTCTTTAGTTTTTTCCACTGGAATGTTTATTCTGAATTATCTAATTCATATTGTAAGTATAGAGGGAG-TTTAATATAAAATTATTAAACTGATATTTGTGAAAGAATGTATTTGTGCATTTAACAAATATGTTAAACCTCAGACTGTTATTGGGCAGCTGAGCATACAGCAATAAAAGTAAC i panTro5.chr22 C 0 C 0 s panPan2.chr7 108533844 184 - 162613886 AATTGTTTACTTTATTCCAATGCAATGTTTATTCTGAATTATCTAATTCATATTGTAAGTATATAGGGAG-TTTAATACAAAATTATTCAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATGTTAATCCTCAAACTGTTATTGGGCAGCTGAGCATACAGCAATAAAAATAAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 143019 184 + 150013 AATTGTTTAGTTTTCTCCAACGGAATGTTTCATCTGAGTTATCTAATTCATATTGTAAGTATATAGGGAG-TTTAATATAAAATTATTAAACTAATATTTGTGAAAGAATGTATTTGTGCATTTAACAAATATGTTAATCCTCAAACAGTTATTGGGCAGCTGAACATACAGCAATAAAAACAAC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55783892 182 + 99891981 AATTGTTTAGTTTTTTCCAATGGAATATTTATTCTGAGTTATCTAATTCATAT--TAAGTATATAGGGAG-TTTAATATAAAATTATTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACTAATATGTTAATCCTCAAACTGTTATTGGGCAGCTGAGCATACAGCAATAAAAATAAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133479613 184 - 185818997 AATTGTTTAGTTTTTTCCAATGGAATGTTTATTCTGAATTATCTAATTCACATTTTAAGTATATAGGGAG-TTTAATATAAAAATTTTAAACTGATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATAAC i rheMac8.chr3 C 0 I 2 s macFas5.chr3 67309296 184 + 192294377 AATTGTTTAGTTTTTTCCAATGGAATGTTTATTCTGAATTATCTAATTCACATTTTAAGTATATAGGGAG-TTTAATATAAAAATTTTAAACTGATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATAAC i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 2791159 184 + 3123512 AATTGTTTAGTTTTTTCCAATGGAATGTTTATTATGAATTATCTAATTCACATTTTAAGTATATAGGGAG-TTTAATATAAAATTTTTAAACTGATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATAAC i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 2511872 184 + 10077455 AATTGTTTAGTTTTATCCAATGGAATATTTATTCTGAATTATCTAATTCATATTTTAAGTATATAGGGAG-TTTAATATAAAAATTTTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATAAC i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 5717468 184 + 127223203 AATTGTTTAGTTTTATCCAATGGAATATTTATTCTGAATTATCTAATTCATATTTTAAGTATATAGGGAG-TTTAATATAAAATTTTTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATAAC i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 1184466 184 - 1799296 AATTGTTTAGTTTTATCCAATGGAATATTTATTCTGAATTATCTAATTCATGTTTTAAGTATATAGGGAG-TTTAATATAAAAATTTTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATAAC i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 1761341 184 + 6934359 AATTGTTTAGCTTTTTCCAATGGAATGTTTATTCTGAATTATCTAATTCATATTTTCAGTATATAGGGAG-TTTAATATAAAATTTTTAAACTAATATTTGTGAAAGAGTGTATTTGTTCATTTAACAAATATATTAATCCTCTAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATAAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124869 184 - 128169293 TATTGCTTAGTTTTTTCCAATAGAATGTTTATTCTGAATTATCTAATTCATATTGCAAGTATTTAGGGAG-TTTAATATAAAATTATGAAACTAATACTTGTGAAAGAGTGCATTTGTCCATTTTACAAATATGTTAATCCTCAAACTGTTATTGGGCAGCTGAGTATATAGCAAAAAAAAAAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 741882 184 - 18371965 TATTTCTTAGTTTATCCCAAAAGAATGTTTATTCTGAATTATCTAATTCATATTGCAAGTATATAGGGAG-TTTAATATAAAATTATTAAACTAATACTTGTGAAAGAGTGTATTTGTCCATTTTACAAATATGTTAATCCTCAAACTGTTATTGGGCAGCTGAGCATACAGTaaaaaaaaaaaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1401597 180 + 3566421 TATTTCTTAGTTTTTTCCAATAGAATGTTTATTCTGAATTATCTAATTCATATTGCAAGCATATAGGGAG-TTAAATATAAAATTATTAAACTAATAATTGTGAAAGAATGTATTTGTCCATTTTACAAATATGTTAATCCTCAATCTGTTATTGGGCAGCTGAGCATACAGCAAAAAAAA---- i cebCap1.NW_016107540v1 C 0 I 6 s aotNan1.NW_018514471v1 1903192 184 - 9267652 TATTGCTTAGTTTTTTCCAATAGAATGTTTATTCTGAGTTATCTAATTCATATTACAAGTATATAGGGAG-TTTAATATAAAATTATTAAACTAATACTTGTGAAAGAGTGTATTTGCCCATTTTACAAATATGCTAATCCTCAAACTGTTATTGGGCAGCTGAGCATACAGCaaaaaaaaaaaa i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51774011 183 - 55844845 AATTGTTCAATTTTCTTTGGTGAAATGCTTATTTTGAATTTTCTAGTCAACATTGCAATTAT--GGGAAGTTTTGATTTAAAATTACTACACTGGTACTTGTGAAATAATTTattcatccatttaacaaatacattaactgccaagctgtgactggggacctgagcatacaacaatacaaatgac i canFam3.chr18 I 158 I 2 e ponAbe2.chrUn 66752458 630 - 72422247 I a score=12376.000000 s hg38.chrUn_KI270749v1 69046 1 + 158759 a s panTro5.chr22 3657019 1 + 37823149 A i panTro5.chr22 C 0 I 2 s panPan2.chr7 108534028 1 - 162613886 A i panPan2.chr7 C 0 I 2 s gorGor5.CYUI01000341v1 143203 1 + 150013 A i gorGor5.CYUI01000341v1 C 0 I 2 s ponAbe2.chrUn 66753088 1 - 72422247 A i ponAbe2.chrUn I 630 I 960 s nomLeu3.chr17 55784074 1 + 99891981 A i nomLeu3.chr17 C 0 I 2 s rheMac8.chr3 133479799 1 - 185818997 A i rheMac8.chr3 I 2 C 0 s macFas5.chr3 67309482 1 + 192294377 A i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 2791345 1 + 3123512 A i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 2512058 1 + 10077455 A i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 5717654 1 + 127223203 A i chlSab2.chr21 I 2 C 0 s manLeu1.NW_012105809v1 1184652 1 - 1799296 A i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 1761525 1 + 6934359 A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108125053 1 - 128169293 A i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 742066 1 - 18371965 a i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1903376 1 - 9267652 a i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51774196 1 - 55844845 a i canFam3.chr18 I 2 C 0 e cebCap1.NW_016107540v1 1401777 6 + 3566421 I a score=2655.000000 s hg38.chrUn_KI270749v1 69047 1 + 158759 -A s panTro5.chr22 3657022 1 + 37823149 -A i panTro5.chr22 I 2 C 0 s panPan2.chr7 108534031 1 - 162613886 -A i panPan2.chr7 I 2 C 0 s gorGor5.CYUI01000341v1 143206 1 + 150013 -A i gorGor5.CYUI01000341v1 I 2 C 0 s nomLeu3.chr17 55784077 1 + 99891981 -A i nomLeu3.chr17 I 2 C 0 s rheMac8.chr3 133479800 1 - 185818997 -A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309483 1 + 192294377 -A i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2791346 1 + 3123512 -A i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2512059 1 + 10077455 -A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717655 1 + 127223203 -A i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184653 1 - 1799296 -A i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761526 1 + 6934359 -A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108125054 1 - 128169293 -A i calJac3.chr8 C 0 I 6 s saiBol1.JH378145 742067 1 - 18371965 -a i saiBol1.JH378145 C 0 I 22 s aotNan1.NW_018514471v1 1903377 1 - 9267652 -a i aotNan1.NW_018514471v1 C 0 I 40 s canFam3.chr18 51774197 1 - 55844845 t- i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66753089 960 - 72422247 I e cebCap1.NW_016107540v1 1401777 6 + 3566421 I a score=205450.000000 s hg38.chrUn_KI270749v1 69048 37 + 158759 CTTTTATGCGTATAATATTTATGGAATACGTTAC---TGG s panTro5.chr22 3657023 37 + 37823149 TTTTTATGTGTACAATATTTATGGAATACATTAC---TGG i panTro5.chr22 C 0 C 0 s panPan2.chr7 108534032 37 - 162613886 TTTTTATGTGTACAATATTTATGGAATACATTAT---TGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 143207 37 + 150013 TTTTTATGTGTACAATATTTATGGAATAAATTAC---TGG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55784078 37 + 99891981 TTTTTATGTGCACGATATTTATGGGATACATTAC---TGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133479801 31 - 185818997 TTTTTATGTGTACAA-ATTTATGTaataaat--------a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309484 36 + 192294377 TTTTTATGTGTACAA-ATTTATGTaataaattac---tga i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2791347 36 + 3123512 TTTTTATGTGTACAA-ATTTATGTaataaattac---tga i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2512060 36 + 10077455 TTTTTATGTGTACAA-ATTTATGGaataaattac---tga i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717656 36 + 127223203 TTTTTATGTGTACAA-ATTTATGGaataaattac---tga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184654 36 - 1799296 TTTTTATGTGTACAA-ATTTATGGAATAAATTAC---TGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761527 36 + 6934359 TTTTTATGTGTACAA-ATTTGTAGaataaattac---tga i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108125061 37 - 128169293 ATTTTATATGCACAATATGTATGGAATATATTACAGA--- i calJac3.chr8 I 6 C 0 s saiBol1.JH378145 742090 34 - 18371965 TTTTTATATGCACAATATGTACGGAATATATACC------ i saiBol1.JH378145 I 22 C 0 s cebCap1.NW_016107540v1 1401783 34 + 3566421 TGTTTATATGCACCATATGTATGGAATATATATC------ i cebCap1.NW_016107540v1 I 6 C 0 s canFam3.chr18 51774198 37 - 55844845 tgtctatcctcatagagtttatgtaataaaatac---ata i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66753089 960 - 72422247 I e aotNan1.NW_018514471v1 1903378 40 - 9267652 I a score=9004191.000000 s hg38.chrUn_KI270749v1 69085 928 + 158759 --------AACAAATAAAT--AATTTAGTTAATAACATGACAAAGAACAGAAATTGTATACACTATAGAGCATAGTAATGGAATAATGAATGATTAAAGTTATTAATATTAGGTAGAAAATGAAGGGTATCTTTGAGAGCAGATCTCAAGGAAGC--------------AAGCAATTTGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATTTAGAAGTCAAGACTTTTTGAGCAAAAACAAAAATATGACTATTAGTCACCAATTCAGTACAGT-GAAAAAAGAGTTGAAGAGATATCTTGGAAGTAAACCATATTGTGGAagagcatgtagggttttgataatcatgggattattctgaattaattttaaatgcaataggaatatatgagatactttcaccagagaataacatgattgtgtttgcatttcaatggggtgtatctggtgcaccgcgtagaa-----taaa-----taggt-tatgtgagc-----aaataaattggaaggctattgtaat-ccagagaaaaaaggtagtgacttaggtgagaatgctgtcaggatgagtggtattagtggtgagaagtcgttaggccatggatgtatttcagaggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaagatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAAGAGAGTTACTTGGGAA-----TGGC--------AAGATCAAAACTTC-----TCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAACGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCAAGACTACACGGGCTCAC-----ACTCCCAAGAGCAAAAGTAAATCATCAC-AAAGGTGCTTC-----------CTGATAATTCTAGAGAATGGAGAATTACTGTAACATCTTTCTGATTT s panTro5.chr22 3657060 928 + 37823149 --------AACAAATAAAT--AATTTAGTTAATAACATGACAAAGAACAGAAATTGTATAGACTATAGAGCATAGTAATGGAATAATGAATGATTAAAGTTATTAATATTAGGTAGAAAATGAAGGGTATCTTTGAGAGCAGAACTCAAGGAAGC--------------AAGCAATTCACCTTATG-TGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATTTACAAGTCAAGACTTTTTGAGCAAAAACAAAAATATGACTATTAGTCACCAATTCAGTACagt-gaaaaaaaagtagaagagatatcttggaagtaaaccatgttgtggaagagcatgtagggttttgataatcatgggattattctgaattaattttaaatgcgataggaatatatgagataatttcaccagagaataacatgattgtgtttgcatttcaaaggggtgtatctggtgcactgtgtagaa-----taaa-----taggt-tatgtgagc-----aaataaattgggaggctactgtaat-ccagagaaaacaggtagtgacttaggtgagaatgctgtgaggatgagtggtagtagtggtgagaagtcgttaggccatggatgtatttcataggactatccaag-agaactgcagctaagttggagtgtagggagtgaaa-----tggagaactcaaagatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTCATTAAGAGAGTTACTTGGGAA-----TGGC--------AAGATCAAAACTTC-----TCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAATGAATGACTTTGGGATCAGAAAGCCACCATTCTAATTGATGGTTCCACAACTACACGGGCTCAC-----ACTCCCAAGAGCAAAAGTAAATCATCAC-AAAGGTGCTTC-----------CTGATAATTCTAGAGAATGGAGAATTACTGTAACATCTTTCTGATCT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108534069 926 - 162613886 --------AACAAATAAAT--AATTTAGTTAATAACATGACAAAGAACAGAAATTGTATACACTATAGAGCATAGTAATGGAATAATGAATGACTAAAGTTATTAATATTAGGTAGAAAATGAAGGATATCTTTGAGAGCAGAACTCAAGGAAGC--------------AAGCAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATTTACAAGTCAAGACTTTTTGAGCGAAAACAAAAATATGACTATTACTCACCAATTCTGTACAGT-GAAAAAAAAGTTGAAGAGATATCTTGGAACTAAACCATGTTGTAGAagagcatgtagggttttgataatcatgggattattttgaattaattttaaatgcaataggaatatatgagataatttcaccagagaataacatgattgtgtttgcatttcaaaggggtgtatttggtgcaccgtgtagaa-----taaa-----taggt-tatgtgggc-----aaataaattggggggctattgtaat-ccagagaaaaaaggtagtgactaaagtgagaatgctgttagtatgagtggtattagtggtgagaattcgttaggccatggatgtatttcatagaactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaagatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatga--cttattaagagagttacttgggaa-----tggc--------aagatcaaaacttc-----TCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAACGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAAGCTCAC-----AGTCACAAGAGCAAAATTAAATCATCAC-AAAGGTGCTTC-----------CTGGCAATTCTAGAGAATAGAGAATTACTGTAAcatctttctgattt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 143244 929 + 150013 --------AACCAATAAAT--ACTTTAGTTAATAACATGAC-AAGAACAGAAATTGTATACACTATAGAGCATAGTAATGGAATAATGAGTGATTAAAGTTATTAATATTAGGTAGAAAATGAAGGGTATCTTTGAGAGCAGAACTCAAGGAAGC--------------AAGCAATTCGCCTTATGAAAAAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATTTACAAGTCAAGACTTTTTGAGCAAAAACAAAAATATGACTATTAGTCACCAATTCAGTACAGTGGAAAAAAAAGTTGAAGAGATATCTTGGAAGTAAACCATGCTGTGGAagagcatgtagggttttgataatcatgggatgattctgaattaattttaaatgcgataggaatatatgagataatttcaccagagaataacatgactgtgtttgcatttcaaaggggtgtatctcgtgcactgtgaagaa-----taaa-----taggt-tatgtgagc-----aaataaattgggaggctattgtaat-ccacagaaaataggtagtgacttaggtgagaatgctatgagtatgagtggtattagtggtgagaagtcgtcaggccatggatgtatttcagaggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaagatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAAGAGAGTTACTTGGGAA-----TGGC--------AAGATCAAACCTTC-----TCACTTTCAAATTTAT-GAAAAATATTGTTTTCCGAACGAATGACTTTGGGATTAGAAAGCCATCATTCTAATTGATGGTTCCACGACTACACGGGCTCAC-----ACTCCCAAGAGCAAAAGTAAATCATCAC-AAAGGTGCTTC-----------CTGATAATTCTAGAGAATGGAGAATTACTGTAACATCTTTCTGATTT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55784115 914 + 99891981 --------AAC----AAAT--AATTTAGTTAATAACATGACAAAGAACAGAAATTGTGTACACTATAGAGCATGGTAATGGAATAATGAATGATCAAAATTATTAATATTAGGTAGAAAATGAAGTGTATCTTTGAGAGCAGAACTCAAGGAAGC--------------AAGCAATTAGCCTTAGG-AGAAAAGAG-TTACTGGTGGATAAAGGAGAAA-CTGAAAAATTTACAAGTAAAGACTTTTTGAGCAAAAACAAAAATATGACTATTACTCA-CAATTCAGTACAGT-GAAAAAAAAGTTGAAGAGATATCTTGGAACTAAACCATGTTGTAGAagagcatgtagggttttgataaccatgagattattttgaattaattttaaatgcgataggaatatatgagataatttcaccagagaataacatgattgtgtttgcatttcaaatgggtgtatctggtgcactgcgtagaa-----taaa-----taggt-tatgtgggc-----aaataaattgggaggctattgtaat-ccagagaagaaaagtagtgacttaggtgagaatgctgttagtatgagtggtattagtggtgagaagtcattaggccatggatgtatgtcataggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaagatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTT-TTAAGAGAGTTACTCGGGAA-----TGGC--------AAGATCAAAACTTC-----------TCAAATTTAT-GAAAAATATTGTTTTCAGAACGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAC-------TCACAAGAGCAAAATTAAATAATCAC-AAAGGTGCTTC-----------CTGACAATTCTAGAGAATAGGGATTTACTGTAAcatctttctgattt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133479832 925 - 185818997 --------aatgaataatt--tagttaataaataaCATGACAAAGAACAGAAATTGTATACACTATAGAACACAGTAATAGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAAGAATCTTTGAGAGCAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgattatcatgggattattttgaatcaattttaaatgcaataggaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcaaagggatatatatggtacactgtaaagaa-----taaa-----tatgt-tatgtgggc-----aaacaaattgggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagtcgttaggtcatggatgtatttcgtaggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa-----tggc--------aagatcaaaacttc-----TCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAATGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTC-----------GATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGATTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309520 925 + 192294377 --------aatgaataatt--tagttaataaataaCATGACAAAGAACAGAAATTGTATACACTATAGAACACAGTAATAGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAAGAATCTTTGAGAGCAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatgggattattttgaatcaattttaaatgcaataagaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaagggatatatatggtacactgtaaagaa-----taaa-----tatgg-tatgtgggc-----aaacaaattgggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagtcgttaggtcatggatgtatttcgtaggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAGGAGAATTACTTGGGAA-----TGGC--------AAGATCAAAACTTC-----TCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAATGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTC-----------GATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGATTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2791383 925 + 3123512 --------aatgaataatt--tagttaataaataaCATGACAAAGAACAGAAATTGTATACACTATAGAACACAGTAATAGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAAGAATCTTTGAGAGCAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatgggattattttgaatcaattttaaatgcaataggaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaagggatatatatggtacactgtaaagaa-----taaa-----tatgt-tatgtgggc-----aaacaaattgggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagtcgttaggtcatggatgtatttcgtaggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa-----tggc--------aagatcaaaacttc-----TCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAATGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTC-----------GATGCAATTCTAGAGAACAGAGAATTGTTGTAACATCATTCTGATTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2512096 925 + 10077455 --------aatgaataatt--tagttaataaataacatgacaaagaacagaaataGTATACATTATAGAACACAGTAATGGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAGGGATCTTTGAGAGCAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATATATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTATAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatggcattattttgaatcaattttaaatgcaataggaatacgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaagggttatatatggtacactgtaaagaa-----taaa-----tacgt-tatgtgggc-----aaacaaatttgaaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagttgttaggtcatggatgtatttcataggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa-----tggc--------aagatcaaaacttc-----TCACTTTCAAATTTAT-GAAAAATGTTGTTTTCAGAACGAACGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTC-----------GATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGCTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717692 925 + 127223203 --------aatgaataatt--tagttaataaataaCATGACAAAGAACAGAAATTGTATGCACTATAGAACACAGTAATGGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAGGGATCTTTGAGAACAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTAAG-AAGAAAGAG-TTACCTGTGGATAAAGAAGAAA-CTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAAGAGTATGTAGGGTTTTGATAATCATGGGATCATTTTGAATCAATTTTAAATGCAATAGGAATATGTGAGATAATTTCACCAGAGAATAACATGATTGTGTTTGCATTTCGAAGGTGTATATACGGTACACTGTAAAGAA-----TAAA-----TACGT-TATgtgggc-----aaacaaatttggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtgggatgagtggtgagaagttgttaggtcatggatgtatttcataggactggccgag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcagggatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAGGAGAATTACTTGGGAA-----TGGC--------AAGATCAAAACTTC-----TCACTTTCAAATTTAT-GAAAAATAATGTTTTCAGAACGAAAGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTC-----------AGTGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGATTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184690 925 - 1799296 --------AATGAATAATT--TAGTTAATAAATAACATGACAAAGAACAGAAATTGTATACATTATAGAACACAGTAATGGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAGGGATCTTTGAGAGCAGACTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTATAGT-GAAAAAAAAGTTGAAGAGCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatgggattattttgaatcaattttaaatgcaataggaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaaggggtatatatggtacactgtaaagaa-----taaa-----tacgt-tatgtgggc-----aaacaaatttggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagttgttaggtcatggatgtatttcataggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa-----tggc--------aagatcaaaacttc-----TCACTTTCAAATTTAT-GAAAAATGTTGTTTTCAGAACGAACGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATAATCAT-AAAAGTGCTTC-----------GATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGCTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761563 929 + 6934359 --------aatgaataatt--tagttaataaataacatgacaaagaacataaatTGTATACACTCTAGAACACAGTAATGGAATAATGAATGATTAAATTTATTAATATTAGATAGAAAATGAAAGGGATCTTTGAGAGCAGACTTCAAAGAAAC--------------AATGAATTACCCTTATG-AGGAAAGAG-TTACCAGTGGATAAAGGAGAAA-CTGAAAAATGTATAAATGAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGCGCTATCTTGGAACTAAACCATGCTATacaagagtatgtagggttttgataatcatgggattattctgaatcaattttaaatgtgataggaatatgtgagataatttcaccagagaatagcatgattgtgtttgcatttcgaaggggtatatatggtatgttgtgaagaa-----taaa-----tatgt-tacgtgggc-----aaacaaattgggagactattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttagtatgagtggtatgagtcgtaagaagtcgttaggtcatggatgtatttcataggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagcactggaaggtgacagctgtcagtgaagc-atgctgatgcctcttattaggagaattacttgggaa-----tggc--------aagatcaaaacttc-----TCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAACGAACGACTTTGGGATCAGAAAGTCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAC-AAAAGTGCTTC-----------GATATAATTCTATAGAACAGAGAATTATTGTAACATCATTCTGATTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108125098 950 - 128169293 --------AACAAATAATCAATAAATACTAAATAACATCACAAAGAACAGAAATTATATACACCACAGAGCATAGTAATGGAATAATGAATGATTAAAGTTATTAATTTTGGATAGAAAATGAAGGGGATATTTGAGAATAGACCTCAAGGAAGCAAGCTTTCCTCATAAAGGAATTAGATTTATG-AGGAAAGAC-TGACCTGTGAATAAAGGAGAAA-CTGAAAAATTTATATGGCAAGACTTTTTGAGCAAAAAG-AAAATATGACTATTACTCATCAATGCACTACAGT-GAATAAAAAGTTGAAGACATATCTTGGAATTAAACCATGTTAgataagagcatgtagggttttgataatcatgaaattattttgaattaatttaaaatgcgataggaatacatgagataatttcaccacagaataacatgattgtgtttgcacttcaaaggggtatatctggtgcactgtggagaa-----taaa-----taggt-taagtgcac-----aaataaattaagaggctattgtagt-ccagagaaaaaaggttgtggcttagatgagaatgctgttaatgtaagtggtatgagtggtgagaagtggttaggccatggatgtatttcaaaggactggccaag-agaactgcagctaaatcagagtgtagggagtaaaa-----tggagaaagcaaaggtgactctcagCACTGGAATATGGCAGCTGTCACTGAAGCAACGCTGATGCCTCTTAATACGAGGGTTACTTGGGGAG----TGGC--------AAGATCAGAAGATCAAAACTCACTTTCAAATTTAC-AAAAAATTTTGTTTTCAGAACTGATGACTTTGGGATCAGAAAGCTATCATTCTAATTGATGGTTCCATAACTACAGAAGTTCGA-----ACTCACAAGAGCAAAATTAAATCATCAC-AAAGCTGCTTC-----------TAGACAATTCTAGAGAATAGAGAATTACTGTAACAGCATTCTGATTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 742124 934 - 18371965 --------AATAAATAATT--TACTTACTAAATAACATCACAAAGAACAGAAATTGTATACACTACAGAGCATAGTAATGGAATTATGAATGATTAAAGTTATTAATTTTAGATAGAAAATGAAGGGGATCTTTGAGAGTAGACCTCAAGGAAGC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGAATAAAGGAGAAA-CTGAAAAATTCATATGTCAAGACTTTCTGAGCAAAAAGAAAAATATGACTATTACTCACCAATGCACTACAAT-TAATAAAAAGTTGAAGACATATCTTGGAATTAAACCATGCTGGGTAagagcatgtagggttttggtaatcatggaattattttgaattaattttaaatgtaataggaatacatgagataatttcaccagaaaatgatatgattgcgtttgcatttcaaaggggtatatctggtgcactgtggagaa-----taaa-----tagat-taagtgcac-----aaataaattaagaggctattgtagt-ccagagaaaaaaggttgtggcttagatgagaatgctgttaatataagtggcatgagtggtgagaagtggttaggccatggatatatttcagaggactagccaaa-agaactgcagctaaatccgagtgtagggagtaaaa-----tggagaacgtgaagat--cactcagcaatggaaggtggcagctgtcactgaAGCAATGCTGATGCCTCTTATTACGAGGGTTACTTGGGGAG----TGGC--------AAGATCAAAAGATCAAAACTCGCTTTCAAATTTACAAAAAAATGTTGTTTTCAGAACTAATGACTTTGGGATCAGAAAGCTATCATTCTAATTGATGGTTACATGACTACAGAAGCTGGA-----ACTCACGAGAGCAAAATTAAATAATCAC-AAAGCTGCTTC-----------TAGACAATTCTAAAGAATAGAGAATTACTGTAGCAGCATTCTGATTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1401817 939 + 3566421 --------AATAAATAATT--TACTCACTAAATAATATCACAAAGAACAGAAATTTTATACACTACAGAGCAtagtaatggaataattaatgattaaaattattaattTTAGATAGAAAATGAAGAGGATCTTTGAGAGTAGACCTCAAGGAAGC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGAATAAAGGAGAAA-CTGAAAAATTCATATGTCAAGACTTTCTGAGCAAAAAGAAAGATATGACTATTACTCACCAATGCACTACAGT-GAATAAAAAGTTGAAGACATATCTTGGAATTAAACCATGCTAgataagagcatatagggttttgataatcatggaattattttgaattaattttaaatgcgataggaatacatgagataatttcaccagagaataacatgattgcgtttgcatttcgaagaggtatatctggtgcactgtggagaa-----taaataggttaggt-taagtgcac-----aaataagttaggaggctactgtaat-ccagagaaaaaaggttgtggcttaggtgagaatgctgttaacgtaagtggaatgagtggtgagaagtggttaggccatggatatgtttca-aggactggccgag-agaactgcagctaactcagagtgtaggggataaaa-----tggagaacacaaagatgactctcagCAGTGGAAGTTGGCAGCTGTCACTGAAGCAATGCTGATGCCTCTTATTAGGAGGGCTACTTGGGGAG----TGGC--------AAGATCAGAAGATCAAAACTCACTTTCAAATTTAC-AAAAAATGTTGTTTTCGGAACTAATGACTTTGGGATCAGAAAGCTATCATTCTAATTGATGGTTCCGTGACTACAGAAGCTCGA-----ACTCACAAGAGCAAAATTAAATCATCAC-AAAGCTGCTTC-----------TAGACAATTCTAGAGAATAGAGAATTACAGTAACAGCATTCTGATTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1903418 908 - 9267652 --------AATAAATAATT--TACTTACTAAATAACATCACAAAGAACAGAAATTGTATACACTACAGAGCAtagtaatggaataatgaatgattaaaattattaattTTAGATAGAAAATGAAGGGGATCTTTGAGAGTAGACATCAAGGAAGC--------------AAGAAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGAATAAAGGAGAAA-CTGAAAAATTTATATGTCAAGACTTTCTGAGCAAAAGGAAAAATATGACTATTACTCACCACTGCACTACCGT-GAATAAAATGTTGAAGACATATCTTGGAATTAAACCATGCTggataagagcatgtagggttttgataatcatggaattattttgaatgaattttaaatgcgataggaatacatgaggtaatttcaccagagaataacatgattgtgtctgcatttcaaaggggtatatctggtgcgctgtggagaa-----taaa-----taggt-taagtgcgc-----aaataaattaggaagctattgtaat-ccagagaaaaaaggttgtggcttagataagaatgctgttaatttaagtggtatgagtggtgagaagtggttaggccaaggatgtatttcaaaggactggccaag-agaactgcagctaaatcagagtgtagggagtaaaa---------------------------------tggaagGTGGCAGCTGTCACTGAAGCAATGGTGATGCCTCTTATTACGAGGGTTACTTGGGAAG----TGGC--------AAGATCAGAAGATCAAAACTCACTTTCAAATTTAC-AGAAATTATTGTTTTCAGAACTAATGACTTTGGGATCAGAAAGCTATCATTCTAATTTATGGTTCCATGACTACAGAAGCTCGA-----ACTCACAAGAGCAAAATTAAATCATCACAAAAGCTGCTTC-----------TAGACAATTCTAGAGAATAGAGAATTACTGTAACAGCATTCTGATTT i aotNan1.NW_018514471v1 I 40 C 0 s canFam3.chr18 51774235 948 - 55844845 aacaaattagtaattaatt--aactgatcaattaatattacaaagactagaagttgtatacataatagagcattgtaaaggggtaatgaatgttTAAAACTATTATATTTACACAGAAAATAAAG----CTTTTGAGAGTAGACTTTCGAAAAGC--------------AAGGAGTGCCCGATAAG-GGGAAAGAGAGCTTCTGTGGATAAAGGAACAATTTAAAAAATGTATGAGTCAAGAGTTTTTGAGCAAGGGCAAAGATGTGAGGATCCCTA--TGACTCAGCACAGT--AAAGACAAGTCAAAGAGACATCCCAGAAACAGACCATAACTTAAAagagcatgtagggtcttgtcaaccacggtgttattttgaattaactttaaatgtgataagaacacattagataagtttaccaggggatagcatgatcttgtttatatttcaaca--------ctggtacactttggagaaaagagtaaa-----cgggtacagaagagccagaaaaacaagtctgggggctctagtgat-cctgagaaaaaaggtagtgacttggatt-gaatg--------gtgagagg-gtaagtggtggcaagtggtcagtacatggatacgttttaaaggaagtgcaaagaagagctatggataaattgca-tgaagggagtaagagaaatgggagaattcaaggatgactccaagctctagaagatgagcccattcagtgaaagaatgatgatgacttttactataaga--tgcttggagaataactggttcaaaaggaaaataataaattc-----taatttggagattcat-ggcaagtGTTGTCTCCAGAACCAATGATTTTGCAGTCAGGAAGCGAGCATTCCATTGTGTAGCT-CATGACTGTACAGGCTCAGATATAATCCATGAGAGC-AAATTAAATTACCAT-GAAAGTAATTAAATTACTCCAGAAGGTAATTCTGGAG-ATAGA-AATTAGTGCAA-----TTCTGGTTT i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66753089 960 - 72422247 I a score=4556.000000 s hg38.chrUn_KI270749v1 70013 1 + 158759 -T s panTro5.chr22 3657988 1 + 37823149 -T i panTro5.chr22 C 0 C 0 s panPan2.chr7 108534995 1 - 162613886 -t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144173 1 + 150013 -T i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66754049 1 - 72422247 -T i ponAbe2.chrUn I 960 I 45 s nomLeu3.chr17 55785029 1 + 99891981 -t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133480757 1 - 185818997 -T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310445 1 + 192294377 -T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792308 1 + 3123512 -T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513021 1 + 10077455 -T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718617 1 + 127223203 -T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185615 1 - 1799296 -T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1762492 1 + 6934359 -T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126048 1 - 128169293 -T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743058 1 - 18371965 -T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1402756 1 + 3566421 -T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904326 1 - 9267652 -T i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51775183 1 - 55844845 G- i canFam3.chr18 C 0 C 0 a score=355015.000000 s hg38.chrUn_KI270749v1 70014 44 + 158759 AGGAGAGGTA-GCATTTCCCTGTTTAGCCTAAAT-GCTA-T--TTTTTT s panTro5.chr22 3657989 44 + 37823149 AGGAGAGGTA-GCAGTTCCCTTTTTAGCCTAAAC-GCTA-T--ATTTTT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108534996 43 - 162613886 aggagaagta-gcagttcccttttgagcctaaac-gcta-t---ttttt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144174 46 + 150013 AGGAGAGGTA-GCAGTTCCCTTTTTAGCCTAAAC-GCTA-TTTTTTTTT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55785030 44 + 99891981 aggagaggta-gcagttccctttttagcctaaat-gtta-t--tttttt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133480758 44 - 185818997 AGGAGAGGTA-GCAGTTCCCTTTTTAGCTTAAAC-ACTA-T--TTTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310446 44 + 192294377 AGGAGAGGTA-GCAGTTCCCTTTTTAGCTTAAAC-ACTA-T--TTTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792309 44 + 3123512 AGGAGAGGTA-GCAGTTCCCTTTTTAGCTTAAAC-ACTA-T--TTTTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513022 44 + 10077455 AGGAGaggta-gcagttccctttttagcttaaac-acta-t--tttttt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718618 43 + 127223203 AGGAGAGGTA-GCAGCTCCCTTTTTAGCTTAAAC-GCTA----TTATTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185616 44 - 1799296 AGGAGAGGTA-GCAGTTCCCTTTTTAGCTTAAAC-ACTA-T--TTTTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1762493 45 + 6934359 AGGAGAGGTA-GCAGTTCCCTTTTTAGCTTAAGC-GCTATT--TTTTTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126049 42 - 128169293 AGGAGAGGTG-GCAGTTCCCTTTTTAGCCTAAAT-GTTT-T--TTTT-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743059 42 - 18371965 AGGAGAGGTG-GCAGTTCCCTTTTCAGCCTAAAT-TTTT-T--TTTT-- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1402757 42 + 3566421 AGGAGAGGTG-GCAGTTCCCTTTT-AGCCTAAATGGTTT-T--TTTT-- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904327 42 - 9267652 AGGAGAGGTC-GCAGTTCCCTTTTTAGCCTAAAT-GTTT-T--TTGT-- i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51775184 43 - 55844845 GACAGAGGTAGGTAACTTCCTTTCTAGCCGGAGA-TTCA-T--ATTT-- i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66754050 45 - 72422247 I a score=7255.000000 s hg38.chrUn_KI270749v1 70058 1 + 158759 T s panTro5.chr22 3658033 1 + 37823149 T i panTro5.chr22 C 0 C 0 s panPan2.chr7 108535039 1 - 162613886 t i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144220 1 + 150013 T i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66754095 1 - 72422247 T i ponAbe2.chrUn I 45 I 65 s nomLeu3.chr17 55785074 1 + 99891981 t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133480802 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310490 1 + 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792353 1 + 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513066 1 + 10077455 t i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718661 1 + 127223203 G i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185660 1 - 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1762538 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126091 1 - 128169293 C i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743101 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1402799 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904369 1 - 9267652 T i aotNan1.NW_018514471v1 C 0 C 0 e canFam3.chr18 51775227 0 - 55844845 C a score=497853.000000 s hg38.chrUn_KI270749v1 70059 65 + 158759 AAAGCTCAGCCAAGAGACTCCATTATAATTTTCAAATG-TGT-GTA---ACTTAAATTCTCATAT---GAAAT s panTro5.chr22 3658034 65 + 37823149 AAAGCTCAGCCAAGAGACTCCATTATAATTTTCAAATG-TGT-GTA---ACTTAAATTCTCATAT---GAAAT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108535040 66 - 162613886 aaagctcagccaagagactccattataattttcaaaaattgt-gta---acttaacttctcatat---taaat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144221 65 + 150013 AAAGCTCAGCCAAGAGACTCCATTATAATTTTCAAATG-TGT-GTA---ACTTAAATTCTCATAT---GAAAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55785075 66 + 99891981 aaagctcagccaagagactccattataattttcaaaaattgt-gta---acttaacttctcatat---taaat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133480803 67 - 185818997 AAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTA---AC--AACTTCTCATATTAATAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310491 67 + 192294377 AAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTA---AC--AACTTCTCATATTAATAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792354 67 + 3123512 AAAGCTCAGTCAAGAGACTCCATTATGATTTTCAAAAATTGT-GTA---AC--AACTTCTCATATTAATAAAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513067 66 + 10077455 -aagctcagtcaagagactccattataattttcaaaaattgt-gta---ac--aaCTTCTCATATTAATAAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718662 69 + 127223203 AAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTA---ACTTAACTTCTCATATTAATAAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185661 67 - 1799296 AAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTA---AC--AACTTCTCATATTAATAAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1762539 69 + 6934359 AAAGCTCAGTCAAGACACTCCATTATAATTTTCAAAAATTGT-GTA---ACTTAACTTCCCATGTTAATAAAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126092 62 - 128169293 TAAGCTCAGCCAGGAGACACCATTATAATTTTCAATAATTTTGG--------TAACTTGTCATGT---TAAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743102 61 - 18371965 TAAGCTCAGCCAAGAGACACCATTATAATTTTCAAAAAATTT-G--------CAACTTGTCATAT---TAAAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1402800 60 + 3566421 TAAGCTCAGGCAAGAGACACCATTGTAATTTTCAAAAATGTT-G--------TAACTTAACTTGT---CATA- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904370 66 - 9267652 TAAGCTCAGCCAAGAGACACCATTATAATTTTCAAAAATTTT-GTA---ACTTAACTTGTCATGT---TAAAT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51775227 69 - 55844845 AAAGGTCAGCCAAGAGATTGCACCATCATCTCCAACAATTAT-GTACATGTTTAATTACTCGCAT---TCAAT i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66754096 65 - 72422247 I a score=3560.000000 s hg38.chrUn_KI270749v1 70124 1 + 158759 -A s panTro5.chr22 3658099 1 + 37823149 -A i panTro5.chr22 C 0 C 0 s panPan2.chr7 108535106 1 - 162613886 -a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144286 1 + 150013 -A i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66754161 1 - 72422247 -A i ponAbe2.chrUn I 65 I 775 s nomLeu3.chr17 55785141 1 + 99891981 -a i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133480870 1 - 185818997 -A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310558 1 + 192294377 -A i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792421 1 + 3123512 -A i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513133 1 + 10077455 -A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718731 1 + 127223203 -A i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185728 1 - 1799296 -A i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1762608 1 + 6934359 -A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126154 1 - 128169293 -A i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743163 1 - 18371965 -A i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1904436 1 - 9267652 -A i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51775296 1 - 55844845 T- i canFam3.chr18 C 0 C 0 e cebCap1.NW_016107540v1 1402860 0 + 3566421 C a score=1359837.000000 s hg38.chrUn_KI270749v1 70125 141 + 158759 CCACTATGCTTAAATTAGTCAAAACATTTTCCCCATCTACAACTC-TATCTTGTCATTGCAATCATTTTCACAAAAGTGACTGCAGCTCACAGACCCTAAAAGGA-GAAAATCCAGGGTAGGTTATCTGATCTAGTTAGTTTG s panTro5.chr22 3658100 141 + 37823149 CCACCATGCTTAAATTAGTCAAAACATTTTCCCCATCTACAACTC-TATCTTGTCATTGCAATCATTTTCACAAAAGTGACTGCAGCTCACAGACCCTAAAAGGA-GAAAATCCAGGGTAGGTTATCTGATCTAGTTAGTTTC i panTro5.chr22 C 0 C 0 s panPan2.chr7 108535107 141 - 162613886 ccactatgcttaaattagtcaaaacattttccccatctgcaactC-TATCTTTTCATTGCAATCATTTTCACAAAGGTGACTGCAGCTAACAGACCCTAAAAGGT-GAAAATCTAGGGTAGGTTATCTGATCTAGTTAGTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144287 141 + 150013 CCACTATGCTTAAATTAGTCAAAACATTTTCCCCATCTACAACTC-TATCTTGTCATTGCAATCATTTTCACAAAAGTGACTGCAGCTCACAGACCCTAAAAGGA-GAAAATCCAGGGTAGGTTATCTGATCTAGTTAGTTTG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55785142 140 + 99891981 ccactatgcttaaattagtc-aaaCATTTTCCCCATCTGCAACTC-TATCTTTTCATTGCAATCATTTTCAcaaaagtgactgcagctaacagaccctaaaaggt-gaaaatctagggtaggttatctgatctagttagtttt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133480871 140 - 185818997 CCACTATGCTTAAATTAGTCAAAACATTC-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCACAAA-GTGACTGCAACTAACTGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTACCTGATCTAGTTAGTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310559 140 + 192294377 CCACTATGCTTAAATTAGTCAAAACATTC-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCACAAA-GTGACTGCAACTAACTGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTACCTGATCTAGTTAGTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792422 140 + 3123512 CCACTATGCTTAAATTAGTCAAAACATTC-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCACAAA-GTGACTGCAACTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTACCTGATCTAGTTAGTTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513134 140 + 10077455 CCACTATGCTTAAATTAATCAAAACATTT-CCCCATCTGCAACTCTTATCTTTTCATCGCGATCATTTTCACAAA-GGGACTGCAGCTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAATTAGTTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718732 141 + 127223203 GCACTATGCTTAAATTAATCAAAACATTTCCCCCATCTGCAACTCTTATCTTTTCATTGCGATCATTTTCACAAA-GTGACTGCAGCTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAGTTAATTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185729 140 - 1799296 CCACTATGCTTAAATTAATCAAAACATTT-CCCCATCTGCAACTCTTACCTTTTCATCGCGATCATTTTCACAAA-GGGACTGCAGCTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAATTAGTTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1762609 140 + 6934359 CCACAATGCTTAAATTAGTCAAAACATTT-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCACAAA-GTGACTGCAGCTAACCAACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAGCTAGTTTT i colAng1.NW_012115910v1 C 0 I 319 s calJac3.chr8 108126155 142 - 128169293 CCACTATGCTTAAATTAGCCAAAACATTTTCCCTATGTGCAACTT-TATCTTTTCATTGCAATCATTTTCACAAAAGTGACTGCAACTAACAGACCCTAAATGGTGAAAAATCTAGGGTAGGTTATCTGATCTAGTTAGTTTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743164 140 - 18371965 CCGCTATGCTTAAATTAGTCAAAACATTTTCCCTAAGTGCAACTT-TATCTTTTCATTGCAATCATTTTCAC-AAAGTGACTGCAACTAACAGACCCTAAGTGGT-AAAAATCTAGGGTAGGTTATCTGATCTAGTTAGTTTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1402860 132 + 3566421 ---------TTAAATTATTCAAAACATTTCCCCTATGTGCAACTT-TATCTTTTCATTGCAATCATTTTCACAAAAGTGACTGCAACTAACAGACCCTAAATGGT-GAACATCTAGGGTAGGTTATCTGTTCTAGTTAGTTTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904437 140 - 9267652 CC-CCATGCTTAAATTAGTCAAAACATTTTCCCTATGTGCAACTT-TATCTTTTCATTGCAATCATTTTCACAAAAGTGACAACAACTAACAGACCCTAAATGGT-GAAAATCTAGGGTAGGCTATCTGATCTAGTTAGTTTT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51775297 137 - 55844845 CCTCTGTGCTTATACTAGTCAACACAGTT----TATCTACAACTG-TGTCTTTGAGTTGCAGTAattattccaaaaatgactgcagctaacagactttaaagaat-gggaatctggattaggttatcttgtctaattagtttt i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66754162 775 - 72422247 I a score=827113.000000 s hg38.chrUn_KI270749v1 70266 86 + 158759 GAAGACAGGATCTAGAGATTATTTA-------------ATATGAAATAGGTCACCTGAAATGAAATGTTTACTGAAAACAGCTTGGGTCAGCCCAGTTT s panTro5.chr22 3658241 81 + 37823149 GAAGACAGGATCTAGAGATTATTTA-------------ATATGAAATAGGTCACC-----TGAAATGTTTACTGAAAACAGCTTGGATCAGCCCAGTTT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108535248 99 - 162613886 GAAGACAGGATCTAGAGATTATTTAGGATCTAGAGATTATATGAAATATGTCACCTGAAATGAAGTGTTTACTGAAAACAGCTTGGATCAGCCCAGTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144428 86 + 150013 GAAGACAGGATCTAGAGATTATTTA-------------ATATGAAATAGGTCACCTAAAATGAAGTGTTTACTGAAAACAGCTTGGATCAACCCAGTTT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55785282 86 + 99891981 gaagacaGGATCTAGAGATTATTTA-------------ATATGAAATAGGTCACCTGAAATGAACTGTTTACTGAAAACAGCTTGGATCAGCCCAGTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133481011 86 - 185818997 GGAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAAACTGCTTGGATCAGCCCAGTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310699 86 + 192294377 GGAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAAACTGCTTGGATCAGCCCAGTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792562 86 + 3123512 GGAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAAGTGTTGACTGAAAACTGCTTGGATCAGCCCAGTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513274 86 + 10077455 GAAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAAACAGCTTGGATCAGCCCAGTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718873 86 + 127223203 GAAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAAACTGCTTGGATCAGCCCAGTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185869 86 - 1799296 GAAAACAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACTTGAAATGAAGTGTTTACTGAAAACAGCTTGGGTCAGCCCAGTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763068 86 + 6934359 gaaaaCAGGATCTAGAGATTATTTA-------------ATATGGAATAGGTCACCTGAAATGAATTGTTTACTGAAAACAGCTTGGATCAGCCCAGTTT i colAng1.NW_012115910v1 I 319 C 0 s calJac3.chr8 108126297 85 - 128169293 GAAGATAGGATCTAGAGATTATTTA-------------ATATGGAATA-ATCACCTGAAATGAAGCATTTACTGAAAACAGCTTGGATCAGCCCAGTTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743304 85 - 18371965 GAAGGCAGGATCTAGAGATTATTTA-------------ATATGGAATA-ATCATCTGAAATGAAGCGTTTACTGAAAACAGCTTGGATCAGCCCCGTTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1402992 85 + 3566421 GAAGACAGGATCTAGAGATTATTTA-------------ATATGGAATA-ATCATCTGAAATGAATCGTTTACTGAAAACAGCTTGGATCAGCCCAGTTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904577 85 - 9267652 GAAGACAGGATCTAAAAATTATTTA-------------ATATGGAATA-ATCATCTGAAATGAAAAGTTTACTGAAAACAGCTTGGATCAGCCCAGTTT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51775434 36 - 55844845 gaggacaGAATCAAGTGCTTATTGA-------------A--------------------------------------------------AGCACAGCTT i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66754162 775 - 72422247 I a score=1049031.000000 s hg38.chrUn_KI270749v1 70352 120 + 158759 TCTACCACTGAACCATGCATTTGGTTTAAAAAACACAACAACTCTGGGGAATATCAGCTGCTTCCAACTGTGTTGAAGGTGTTAAAGAAAAGAGCATAAAATTAAAAATGATCATCTGAG s panTro5.chr22 3658322 120 + 37823149 TCTACCACCGAACCATGCATTTGGTTTAAAAAACACAACAACTCTGGGGAATATTGGCTGCTTCCAACTGTGTTGAAGGTGTTAAAGAAAAGAGCATAAAATTAAAAATGATCATCTGAG i panTro5.chr22 C 0 C 0 s panPan2.chr7 108535347 120 - 162613886 TCTACCATTGAACCATGCATTTGGTTTAAAAAACAGGACAACTCTGGGCATCATTGGCTGCTTCCAACTGTGTTGAAGATGTTAAAGAAAAGGGCATAAAATTATAAATGATCATCTGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144514 120 + 150013 TCTACCACTGAACCATGCATTTGGTTTCAAAAACACAACAACTCTGGGGAATATCGGCTGCTTCCAACTGTGTTGAAGGTGTTAAAGAAAAGAGCATAAAATTATAAATGATCATCTGAG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55785368 117 + 99891981 TCTACCACTGAACCATGCATTTGGTTTAAAAAAC---ACAACTCTGGGGAACATTGGCTGCTTCCAACTGTGTTGAAGATGTTAAAGAAAAGAGCATAAAAATATAAATGATCATCTGAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133481097 119 - 185818997 TCTACCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310785 119 + 192294377 TCTACCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792648 119 + 3123512 TCTACCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513360 119 + 10077455 TCTACCATTGAACCATATATTTGGTTTAAAAACCACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718959 119 + 127223203 TCTACCATTGAACCATGTATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAACATAAAATTATAAATGACCATCTGAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185955 119 - 1799296 TCTACCATTGAACCATATATTTGGTTTAAAAACCACAACAACTCTGGGGAACATTGACTACTTCCAACT-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763154 119 + 6934359 TCTACCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACT-TGTTGAAGATGTTTAAGAAAAGAGCATAAAATTATTAATGACCATCTGAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126382 116 - 128169293 T---CCATTGAACCATGTATTTGGTTTAAAAAACACAA-AACTGTGGAGAACATTGGCTGCTTCCAGCCATGTTGAAGATGATATAGAAGAGAACATAAAAGAATAAATAACCATCTAAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743389 119 - 18371965 CCTACCATTGAACCATGTATTTGGTTTAAAAACCACAA-AACTGTGGGGAACATTGGCTGCTTCCAGCCGTGTTGAAGATGATAAAGAAAAGAACATAAAAGAACAAATCACCATCTCAG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1403077 119 + 3566421 TCTACCATTGAACCATGTATTTGGTTTAAAAAACACAA-AACTGTGGGGAACATTGGCTGCTTCCAGCCATGTTGAAGATGATAAAGAAAAGAACATAAAAGAATAAATAACCATCTCAG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904662 119 - 9267652 TCTACCATTGAACCATGTATTTGGTTTAAAAAACACAA-AACTGTGGGGAACATTGGCTGCTTCCAGCCGTGTTGAAGATGCTAAAGAAAAGAGCCTAAAAGAATAAATAACCATATAAG i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66754162 775 - 72422247 I e canFam3.chr18 51775470 0 - 55844845 C a score=1865788.000000 s hg38.chrUn_KI270749v1 70472 184 + 158759 GCCTTTATAGTCTCTGCTCAAG---------AGACTAGAATCTTCC-----ATTCTTAACGAAACACCCAAATATCTTAATAATTGGGCAAA---ATCTAAAT----GTCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTATAATggtgattcactaccttgccacgtctctgagtc-aaaaattaggtctttgtttaggaa s panTro5.chr22 3658442 182 + 37823149 GCCTTTATAGTCTCTGCTCAAG---------AGACTAGAGTCTTCC-----ATTCTTAACGAAACACCCAAATATCTTAATAATTGGGCAAA---ATCTAAAT----ATC--AGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactaccttgccacatctctgagtc-aaaaattaggtctttgtttaggaa i panTro5.chr22 C 0 C 0 s panPan2.chr7 108535467 184 - 162613886 GCCTTTATAGTCTCTGCTCAAG---------AGACTAGAGTCTTCC-----ATTCTTAACAAAACACCCAAATATCTTAATAATTGGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTATAATGGTGATTCACTACCTTGCCACGTCTCTGAGTC-AAAAATTAGATCTTTGCTTAGGAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144634 184 + 150013 GCCTTTATAGTCTCTGCTCAAG---------AGACTAGCATCTTCC-----ATTCTTAACGAAACACCCAAATATCTTAATAATTGGGCAAA---ATCTAACT----ATCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTATAATGGTGATTCACTACCTTGCCACGTCTCTGACTC-AAAAATTAGATCTTTGTTTAGGAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55785485 184 + 99891981 GCCTTTATAGTCTCTGCTCAAG---------AGACTAGAGTCTTCC-----ATTCTTAACAAAACACTCAAACATCTTAATAATTGGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTCTAATGGTGATTCACTACCTTGCCATGTCTCTGAGTC-AAAAATTAGATCTTTGTTTAGGAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133481216 182 - 185818997 GCCTTTATAGTCTCTGCTCAAG---------AGACTAGAGTCTTCC-----ATTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactaccttgcctcgtctctgagtc-aaaaattagatcttcgtttaggaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310904 182 + 192294377 GCCTTTATAGTCTCTGCTCAAG---------AGACTAGAGTCTTCC-----ATTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTACAATGGTGATTCACTACCTTGCCTCGTCTCTGAGTC-AAAAATTAGATCTTCGTTTAGGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792767 182 + 3123512 GCCTTTATAGTCTCTGCTCAAG---------AGACTAGAGTCTTCC-----ATTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactaccttgcctcgtctctgagtc-aaaaattagatcttcgtttgggaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513479 182 + 10077455 GCCTTTATAGTCTCTGCACAAG---------AGACTAGAGTCTTCC-----ATTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactaccttgccacgtctctgagtc-aaaaattagatctttgtttaggaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719078 178 + 127223203 GCCTTTATAGTCTCTGCTCAAG---------AGACTAGAGTCTTCC-----ATTCTTAACA------CCAAATATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTATCTTAAAGATTGTTAAATTACAGTGGTGATTCACTACCTTGCCACGTCTCTGAGTC-AAAAATTAGATCTTTGTTTAGGAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1186074 182 - 1799296 GCCTTTATAGTCTCTGCACAAG---------AGACTAGAGTCTTCC-----ATTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAAttttatcttgaagattgttaaattacaatggtgattcactaccttgccacgtctctgagtc-aaaaattagatctttgtttaggaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763273 184 + 6934359 GCCTTTATAGTCTCTGCTCAAG---------AGACTAGAGTCCTCC-----GTTCTTAACAGAACACCCAAACATGTTAATAATTAGGCAAA---ATTTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactgccttgccacgtctctgagtc-aaaaattagatctttgtttaggaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126498 184 - 128169293 GCCTACATAGTCCCTGCTCAAG---------AGACTAGAGTCTTCC-----ATTCTTAAAGGAACACCCAAATATCTTAATAATTGGGCAAA---AACTAAAT----ATCAGAGAGATCATTTTATCTTGAATATTGTTAAATTGTGTTGGTGTTTCACTACCTTGCCATGTCTCTGAGTC-AAAATTTAGGTCTTTGTTTAGGAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743508 187 - 18371965 GCCAATATAGTCCCTGCTCAAG---------AGACTAGCGTCTT-C-----ATACTTAAAGGGACACCCAAATATCTTCATAATTGAGCAAA---AACTAAATATTAATCAGAGAGATCATTTTATCTTGAATATTGTTAAATGATCATGGTGTTTCACTACCTTGTCATATCTCTGAGTC-AAAATTTAGGTCTTCGTTTAGGAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1403196 183 + 3566421 GCCTATATAGTCCCTGCTCAAG---------AGACTAGAGTCTT-C-----ATTCTTAAAGGAACACCCAAATATCTTAATAATTGGGCAAA---AACTAAAC----ATCAGAGAGATCATTTTATCTTGAATATTGTTAAATTGTAATGGTGTTTCACTACCTTGCCATATCTCTGAGTC-AAAATTTAGGTCTTTGTTTAGGAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904781 184 - 9267652 GCCTATATAGTCCCTGCTCAAG---------AGACTAGAGTCTTCC-----ATTCTTAAAGGAACACCCAAATATCTTGATAATTGGGCAAA---AACTAAAT----ATCAGAGAGATAATTTTATCTTGAATATTGTTAAATTATAATGGTGTTTCACTACCTTGCCATGTCTCTGAGTC-AAAATTTAGGTCTTTGTTTAGGAA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51775470 202 - 55844845 GCCTTTATATTTTCTATTCAAGCCATAGTAAGAACCTGAATTTCTCTTTATTTTTTTAATGACACACCCAACCATCTCAATAGTCAAGCAAATTTAACTAAAT----ATCAGAGAGAGAAACTGATCTTGAAGACTGCTAAATTACAACAGTAATTGCCAAACTAGCCGTGTTTTTGAGCCAAAAAATTAGGTCTTTGCTTTGGAA i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66754162 775 - 72422247 I a score=596964.000000 s hg38.chrUn_KI270749v1 70656 55 + 158759 tcaat-------ggtactctgcaacttggaaataggaagattttagaagactcAAA------------------------------CATTGA s panTro5.chr22 3658624 55 + 37823149 tcaat-------ggtactctgcaacttggaaATAGGAAGATTTTAAAAGACTCAAA------------------------------CACTGA i panTro5.chr22 C 0 C 0 s panPan2.chr7 108535651 55 - 162613886 TCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGACTCAAA------------------------------CATTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144818 55 + 150013 TCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGGCTCAAA------------------------------CACTGA i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66754937 55 - 72422247 TCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGACTCAAA------------------------------CATTAA i ponAbe2.chrUn I 775 I 596 s nomLeu3.chr17 55785669 55 + 99891981 TCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGGCTCAAA------------------------------CATTGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133481398 55 - 185818997 tcaat-------ggtactctgcaacttggaaATAGGAAGATTTTAGAAGACTCAAA------------------------------CATTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67311086 55 + 192294377 TCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGACTCAAA------------------------------CATTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792949 55 + 3123512 tcagt-------ggtactctgcaacttggaaATAGGAAGATTTTAGAAGACTCAAA------------------------------CATTGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513661 55 + 10077455 tcaat-------ggtaccctgtaacttggaaATAGGAAGATTTTAGAAGACTCAAA------------------------------CATTGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719256 49 + 127223203 TCAAT-------GGTACTCTGCAACTTAGAAATAGGAAGATTT------ACTCAAA------------------------------CATTGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1186256 55 - 1799296 tcaat-------ggtaccctgcaacttggaaataggaagattttagaagactcAAA------------------------------CATCGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763457 55 + 6934359 tcaat-------ggcactctgcaagttggaaataggaagattttagaagactccaa------------------------------CATTGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126682 62 - 128169293 TTGGTTTGTTTAGATCCTCTGCAGCTTGTAAATAGGAAGAGTTTAGAGGATTCAAA------------------------------CATTGG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743695 55 - 18371965 TCAAT-------GACCCTCTGCAACTTGGAAATAGGAAGACTTTAGAGGATTCAAA------------------------------CATTGG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1403379 54 + 3566421 TCAAT-------GATCCTCTGCAACTTGGAAATAGGAAGATTTTAGAGGATTCAAA-------------------------------ATTGG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904965 55 - 9267652 TCAAT-------GATCCTCTGCAACTTGGAAATAGAAAGATTCTAGAGGATTCCAA------------------------------CATTGG i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51775672 85 - 55844845 TGAAC-------AATACTTTAAAATTTTGAAATAGAAATATTTGAGAGAACTCAAATAGCTCCAAAATACACAAATCCTTAAATACCATTGA i canFam3.chr18 C 0 C 0 a score=448497.000000 s hg38.chrUn_KI270749v1 70711 51 + 158759 CTTTCTTGTGTGC------AAAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT s panTro5.chr22 3658679 49 + 37823149 CTTTCTTGTTTGC--------AAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108535706 49 - 162613886 CTTTCTTGTGTGC--------AAAAAAAGATGTATTGAGATAAGACAAGTCTTTCCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144873 52 + 150013 CTTTCTTGTGTGC-----AAAAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55785724 49 + 99891981 CTTTCTTGTGTGC--------AAAAAAAGAAGTATTGACATAAGACAAGTCTTTCTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133481453 50 - 185818997 CTTTGTTGTGTGC-------AAAAAAAAGATGTATTGGGATAAGACAAGTCTTTCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67311141 50 + 192294377 CTTTGTTGTGTGC-------AAAAAAAAGATGTATTGGGATAAGACAAGTCTTTCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2793004 50 + 3123512 CTTTGTTGTGTGC-------AAAAAGAAGATGTATTGAGATAAGACAAGTCTTGCCT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513716 57 + 10077455 CTTTGTTGTGTGCAAAAAAAAAAAAAAAGACATATTGAGATAAGACAAGTCTTTCCT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719305 51 + 127223203 CTTTGTTGTGTGC------AAAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1186311 50 - 1799296 CTTTGTTGTGTGC-------AAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763512 51 + 6934359 CTTTGTTGTGTGC------AAAAAAAAAGACGTATTGAGGTGAGACAAGTCTTTCCT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126744 49 - 128169293 CTTTCTTGTGAGC--------AAAAAATGATGCATTGAGATAAGACAAGTCTTCCCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743750 49 - 18371965 CTTTCTTGTGAGC--------AAAAAATGATTCATTGAGATAAGACAAGTCTTCCCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1403433 49 + 3566421 CTTTCTCGTGAGC--------AAAAAATGATGTATTGAGATAAGACAAGTCTTCCCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1905020 48 - 9267652 CTTTCTTGTGAGC---------AAAAATGATGTATTGAGATAAGACAAGTCTTCCCT i aotNan1.NW_018514471v1 C 0 I 859 s canFam3.chr18 51775757 48 - 55844845 GTTCCTTGTGTTC--------AAAAGTAAACAT-TTTAGATACAGCTAATCTTTCCT i canFam3.chr18 C 0 I 23 e ponAbe2.chrUn 66754992 596 - 72422247 I a score=306926.000000 s hg38.chrUn_KI270749v1 70762 44 + 158759 TGCAAGGATACCTCTA--ATGCTCATACACC-ACCTC---CCCTAACGTT s panTro5.chr22 3658728 44 + 37823149 TGCAAGGATACCTCTA--ATGCTCATACACC-ACCTC---CCCTAACGTT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108535755 44 - 162613886 TGCAAGGATACCTCTA--ATGCTCATATACC-ACCTC---CCCTAACATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 144925 44 + 150013 TGCAAGGATACCTGTA--ATGCTCACACACC-ACCTC---CCCTAACGTT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55785773 44 + 99891981 TGCAAGGATACCTCTA--ATGCTCATACACC-ACCTC---CCCTAAAGTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133481503 44 - 185818997 TGCAAGGATACGTCTA--ATTCTCATACACC-ACCTC---CCCTAACCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67311191 44 + 192294377 TGCAAGGATACGTCTA--ATTCTCATACACC-ACCTC---CCCTAACCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2793054 44 + 3123512 TGCAAGGATACGTCTA--ATTCTCATACACC-ACCTC---CCCTAACCTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513773 44 + 10077455 TGCAAGGATATGTCTA--ATTCTCATACACC-ACCTC---CCCTAACCTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719356 44 + 127223203 TGCAAGGATACGTCTA--ATTCTCATACACC-ACCTC---CCCTAACCTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1186361 44 - 1799296 TGCAAGGATATGTCTG--ATTCTCATACACC-ACCTC---CCCTAACCTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763563 44 + 6934359 TGCAAGGATACGTCTA--ATTCTCATACACC-ACCTC---CGCTAACCTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126793 36 - 128169293 -----------GTTTG--ATGCTCATGTACC-ACCTCCTACTCTAACCTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743799 36 - 18371965 -----------GTCTG--ATGCTCATGTACC-ACCTCCTACTCTAACCTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1403482 36 + 3566421 -----------GTTTA--ATCCTCATGTACC-ACCTCCTACTCTAACCTT i cebCap1.NW_016107540v1 C 0 C 0 s canFam3.chr18 51775828 47 - 55844845 TACAAAGATACATATATTATCCTCATGCACCAATCTC---TCTTAACCTC i canFam3.chr18 I 23 C 0 e ponAbe2.chrUn 66754992 596 - 72422247 I e aotNan1.NW_018514471v1 1905068 859 - 9267652 I a score=5103524.000000 s hg38.chrUn_KI270749v1 70806 501 + 158759 AATATAGCTTCCAGGTCAGTAACCAGTGTCAGAGAGCAGCCCATGCAACTACAAATTCAATAGATGTCGAACACAGGGTCAAGCCTAGAATAAGAAGTCTCAGCTAATTAACTATGC-TTTTT----CCCCAAATTCACATTAAGAAAAACT---TGGATATGTCAGAGAATGCATTCTAAGTTCACTCAACCTAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGAAGCATTcttctcctaac-agaa-agcaaggaa--aacgaaatatcacaccacaggagggatttcacaaattactgtcaacatcaaaaccttaaaataggcaaggagaata--------cagattcacaatgaactcttgtacttgttttgttcagagaagagatggttctgagagaatgacagtgaactaaccccagctggtttag-ttggtgctttcaactgctgcttctga-tcAACTCCTTTAGCTAGAATAAATTGATGAGGATTTTGGCATGTGGTAT-------TAGAGATGGTT---- s panTro5.chr22 3658772 501 + 37823149 AATATAGCTTCCAGGTCACTAACCAGTGTCAGAGAGCAGCCCATGCAACTACAAATTCAAAAGATGTCGAACACAGGGTCAAGCCTAGAATAAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCCAAATTCATATTAAC-AAAACT---TGGATATGTCAGAGAATGCATTCTAAGTTCACTCAACCTAGGAGGGAGAAACATAATTTTAAATTAAGAGTTGAATTATTCTTGTcctatc-agaa-agcaaggaa--aacgaaatatcacaccacaggagggatttcacaaattagtgtcaacatcaaaaccttaaaacagtcaaggagaatg--------cagattcacaatgaactcttgtacttgttttgttcagagaagagatggttctgagagaatgacagtgaactaaccccagctggtttag-ttggtgctttcaactgctgcttctgA-TAAACTCCTTTAGCTAGAATAAATTGATGAGGATTTTGGCATGCAGTAT-------TAGAGATGGTT---- i panTro5.chr22 C 0 I 4 s panPan2.chr7 108535799 505 - 162613886 AATATAGCTTCCAGATCACTAACCAGTGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCGAACACAGGGTCAAGCCTAGAATGAGAAGTCTTAGTTAATTAAGTATGCTTTTTT----CCCCAAATTCATATTAAC-AAAAATATGTGGATATGTCAGAGAATGCATTCTAAGTTCACTCAACCTAAGAGGGAGAAACATAATGTTAAATTAAGAGCTGAAGCATTctcttcctaac-aaactagcaagtaa--aatgaaataccacaccacaggagggatttcacaaattagtgtcaacatcaaaaccttaaaacaggcaaggaaaatg--------cagattcacaattaactcttctacttgttttgttcagagaagagatggttctgagagaatgacagtgaattaacaccagctagtttag-ttggtgctttcagttgctgcttctgA-TGAACTCCTTTATCTAGAATAAATTTATGAGGATTTTGGCATGTGGTAT-------TAGATATGGTT---- i panPan2.chr7 C 0 I 4 s gorGor5.CYUI01000341v1 144969 502 + 150013 AATATAGCTTCCAGGCCACTAACCGGTGTCAGAGAGCAGCCTATGCAACTACAGATTCAAAAGATGTCAAACACAGGGTCAAGCCTAGAATAAGAAGTCTTAGCTAATTAAGTATGCTTTTCC----CCCCAAATTCATATTAACAAAAACT---TGGATATGTCAGAGAATGCATTCTAAGTTCACTCAACCTAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGAAGCATTCTTGTCCTAAC-AGAA-AGCAAGGAa--aacgaaatatcacaccacaggagggatttcacaaattagtgtcaacatcaaaaccttaaaataggcaaggaaaatg--------cagattcacaatgaactcttctacttgttttgttcagagaagagatggttctgagagaatgacagtgaattaaccccagctggtttag-tttgtgctttcaattgctgcttctgA-TAAACTCCTTTAGCCAGAATAAATTTATGAAGATTTTGGCATGTGGTAT-------TAGAGATGGTT---- i gorGor5.CYUI01000341v1 C 0 I 4 s nomLeu3.chr17 55785817 505 + 99891981 AATATAGCTTCCAGATCACTAACCAGTGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAACTGTTGAACACAGGGTCAAGCCAAGAATGAGAAGTCTTAGTTAATTAAGTATGCTTTTTT----CCCCAAATTCGTATTAAC-AAAAACATATGGATATGTCAGAGAATGCATTCTAAGTTCACTCAACCTAGGAGGGAGATACATACTTTTAAATTAAGAGCTGAAGCATTctcttcctaac-aaaatagcaagtaa--aatgaaatatcacatcacaggagggatttaacaaattagtgtcaacatcaaaaccttaaaataggcagggaaaatg--------cagattcacaattaactcttctacttgttttgttcagagaagagatggttctgagagaatgacagtgaattaacgtcaggtggattag-ttggtgctttcaattgctgcttctgA-TGAACTCCTTTAGCTAGAATAAATTTATGAGGATTTTGGCATGTGGTAT-------TAGATATGGTT---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133481547 505 - 185818997 AATATAGCTTCAAGATCACTAACCAGTGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTAAATTCATATTAAC-AAAAACATGTGGATAAGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACACACTCTCTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCACACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGGCAAGGAAAATG--------CAGATTCACAATTAACTCTTCTACTTGTTTTGTTCAGAAAAGAAATGGTTCTGAAAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAGTTGCTACTTCTGA-AGAACTCCTTCAGCTAGAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGATATGGTT---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67311235 505 + 192294377 AATATAGCTTCAAGATCACTAACCAGTGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTAAATTCATATTAAC-AAAAACATGTGGATAAGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACACACTCTCTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCACACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGGCAAGGAAAATG--------CAGATTCACAATTAACTCTTCTACTTGTTTTGTTCAGAAAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAGTTGCTACTTCTGA-AGAACTCCTTCAGCTAGAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGATATGGTT---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2793098 505 + 3123512 AATATAGCTTCAAGATCACTAACCAGTGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTAAATTCATATTAAC-AAAAACATGTGGATAAGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACACACTCTCTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCACACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGGCAAGGAAAATG--------CAGATTCACAATTAACTCTTCTACTTGTTTTGTTCAGAAAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAGTTGCTACTTCTGA-AGAACTCCTTCAGCTAGAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGATATGGTT---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513817 505 + 10077455 AATATAGCTTCCAGATCACTAACCAGTGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTAAATTCATATTAAC-AAAAACATGTGGATAAGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACATACTCTCTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCACACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGGCAAGGAAAATG--------CAGATTCACAATTAACTCTTCTACTTGTTTTGTTCAGAAAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAATTGCTACTTCTGA-AGAACTCCTTCAGCTAGAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGGTAGGGTT---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719400 505 + 127223203 AATATAGCTTCCAGATCACTAACCAGTGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTAAATTCATATTAAC-AAAAACATGTGGATAAGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACGCATTCTTTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCACACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGACAAGGAAAATG--------CAGATTCACAATTAACTCTTCTACTTGTTTTGTTCAGAGAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAATTGCTACTTCTGA-AGAACTCCTTTAGCTAGAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGATATGGTT---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1186405 505 - 1799296 AATATAGCTTCCAGATCACTAACCAGTGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTC----CCCTAAATTCATATTAAC-AAAAACATGTGGATAAGTCATAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACGTACTCTCTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCACACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCATAAAATAGGCAAGGAAAATG--------CAGATTCTCAATTAACTCTTCTACTTGTTTTGTTCAGAAAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAGTTGCTACATCTGA-AGAACTCCTTCAGCTACAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGGTAGGGTT---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763607 505 + 6934359 AATATAGCTTCCGGATCACTAACCAGTGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTGAATTCATATTAAC-AAAAACATGTAGATATGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACACACTCTCTTCCGAAC-AAAATAGCAAGTAA--AATGAAATATCACACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGGCAAGGAAAATG--------CAGATTCACAGTTAACTCTTCTACTTGTTTTGTTCAGAGAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAATTGCTACTTCTGA-AGAACTCCTTTAGCTAGAATAAATGTATGAGGATTTTGGCCTGTGGTAT-------TAGATATGGTT---- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126829 508 - 128169293 AATAAAGCTTCCAGATCACTAACTACTGTCAGAGAGCAGCCTATGCAGCTACAAACTCAAAAGAGGCCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTCGCTAATTAAGTATGTTTTTTTTTTCCCTCAAATTCATATTAAC-AAAAACATGTGGGTATATCAGGGAATGCATTCTAAGTTCACTCAACTTAGGAGGGAGAAACATAATTTTAAATAAAGGGCTGAAACACTTTCTCCCTAACAAAAATAGCCAGTAA--AATGAAGTATCGCACCACAGGAGGGATTTCACAAATTAGTGTGAACGCAAAAACCTTAAAATAGTCAAGGAAAGTG--------CAGATTCAGAATTGACTCTTCTACTTGTTATGTTCAGAGAAGAGATGGCTGTGAGAAAATGAC--TGAATTAGCACAAACTGGTTTAG-ATGGTGCTTTCAGTTGCTACTAGTGA-TGAGCCCCTTTAGCTGGAATAAATGGATGAGGATTTTGGCATGTGGTAT-------TAGAACTGGTT---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743835 506 - 18371965 AATAAAGCTTCGAGATCACTAACTACTGTCAGAGAGCGGCCTATACAACTACAAATTCAAAAGAGGCCAAATGCAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGATTTTTTTT--CCTTAAATTCATATTAAC-AAAAACATGTGGGCATATCAGGGAATGAATTCTAAGTTCACTCGACTCAGGAGGGAGAAAGATAATTTTAAATAAGGGGCTGAAGCACTTtcttcctaac-aaaatagcaagtaa--aatgaagtatcacaccacaggagggatttcacaaattagtgtcaacataaaagccggaaaataggcaaggaaagtg----------gattcagaatcgactcttctgcttgtttagttcagagaagagatggctctgagagaatgacagtgaattaacacaagctggtttag-atagtgctttcaattgctgctactgATTGAGCTCCTTTAGCTGGAATAAACGTATGAGGATTTTGGCATGTGGTAT-------TAGAAATGATT---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1403518 503 + 3566421 AATAAAGCTTCCAGATCACTAACTACTGTCAGAGAGCGGCCTATGCAACTACAAATTCAAAAGAAGCCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGATTTTTT----CCTCAAATTCATATTAAC-AAAAAC--GTGGGTATATCAGGGAATGCATTCTAAGTTCACTCAACTCGGGAGGGAGAAACATAATTTTAAATAAAGGGCTAAAGCACTTtcttcctaac-aaaatagcaagtaa--aatgaagtatcacatcacaggagggagttcacaaattagtgtcaacataaaaaccttaaaataggcaaggaaagtg--------cagattcagaattaactcttctacttgttttgtccagagaagagatgactctgaaagaatgacagtaaattaacacaagctggtttag-atggtgctttcagttgctactactgA-TGAGCTCCTTTAGCTGGAATAAATGTATGAGGATTTTGGCATGTGGTAT-------TAGAAATGGTT---- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1905927 504 - 9267652 aataaaGCTTTCAGATCACTAACTACTGTCAGAGAGCAGCCTATGCAACTGCAAATTCAAAAGAGGCCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATAATTTTTTT---CCTCAAATTCATATTAAC-AAAAAC--GTGGGTATATCAGGGAATGCATTCTAAGTTCACTCAACTTAGGAGGGAGAAACATAATTTTAAATAAAGGGTTGAAGCACTTtcttcctaac-aaaatagcaagtaa--aatgaagtatcacaccacaggagggattttacaaattagtgtcaacacaaaaaccttaaaataggcaaggaaagtg--------cagattcagaattaactcttctacttgttttgttcagagaagagatggctctgagagaatgacagtgaatgaacacaagctggtttag-atggtgctttcaattgctactactga-tgagctcctttagctggaataaatGTATGAGGATTTTGGCATGTGGTAT-------TAGAAATGGTT---- i aotNan1.NW_018514471v1 I 859 C 0 s canFam3.chr18 51775875 503 - 55844845 -AAGTAGCTCCCAGATTTCTAAGTAGTGCCAGATAATAGCACACACAACTGTATATTCAAAAAAGGCCAATTATAGAATC-AGCCTGGAAAAAGAAATCTTA-CTAATACCG---ACTTTTTT----CC---AAGTTACATCCAC-A----------GATGTGTCAGAGAATAGATTCTACGGT-GCTCAACCTAGCA--GAGAAACACAATTTTAAATCAAGGACTGAAGTGTTTtcttcataac-aaaatagggaaaaaataatgtaatatcgcatcccaagagggatttcataaattagtgtcaacatcaaaatcttaaaatatg-aaggataatgattcccagaagagtctcaattaacttctgtgttaattttgcccagagaagagatggttctgggagaatgatagtgaattaacataagttggtttagtttggtgattccaattactactcctga-tgtactctttttgct-gaacaaattaacaaggttcttggcatgtggtatgcagttattgataaagtcattg i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66754992 596 - 72422247 I a score=36210.000000 s hg38.chrUn_KI270749v1 71307 3 + 158759 CTT s panTro5.chr22 3659277 3 + 37823149 ATT i panTro5.chr22 I 4 C 0 s panPan2.chr7 108536308 3 - 162613886 ATT i panPan2.chr7 I 4 C 0 s gorGor5.CYUI01000341v1 145475 3 + 150013 ATT i gorGor5.CYUI01000341v1 I 4 C 0 s ponAbe2.chrUn 66755588 3 - 72422247 ATT i ponAbe2.chrUn I 596 I 91 s nomLeu3.chr17 55786322 3 + 99891981 ATT i nomLeu3.chr17 C 0 I 4 s rheMac8.chr3 133482052 3 - 185818997 ATT i rheMac8.chr3 C 0 I 4 s macFas5.chr3 67311740 3 + 192294377 ATT i macFas5.chr3 C 0 I 4 s macNem1.NW_012011522v1 2793603 3 + 3123512 ATT i macNem1.NW_012011522v1 C 0 I 4 s cerAty1.NW_012000909v1 2514322 3 + 10077455 ATT i cerAty1.NW_012000909v1 C 0 I 4 s chlSab2.chr21 5719905 3 + 127223203 ATT i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012105809v1 1186910 3 - 1799296 ATT i manLeu1.NW_012105809v1 C 0 I 4 s colAng1.NW_012115910v1 1764112 3 + 6934359 ATT i colAng1.NW_012115910v1 C 0 I 4 s calJac3.chr8 108127337 3 - 128169293 ATT i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 744341 3 - 18371965 ATT i saiBol1.JH378145 C 0 I 3 s cebCap1.NW_016107540v1 1404021 3 + 3566421 ACT i cebCap1.NW_016107540v1 C 0 I 3 s aotNan1.NW_018514471v1 1906431 3 - 9267652 ATT i aotNan1.NW_018514471v1 C 0 I 3 s canFam3.chr18 51776378 3 - 55844845 att i canFam3.chr18 C 0 C 0 a score=825536.000000 s hg38.chrUn_KI270749v1 71310 87 + 158759 TTTTCCTCT-TATTTGCATTGTTGAATGTAGTAAATACTA---GCTGTATATGGCTACTTCAATTCAAATTAATTACAATGAAATATACTT s panTro5.chr22 3659280 87 + 37823149 TTGTCCTCT-TATTTGCATTGTTCAATATAGTAAATACTA---GCTGTATACGGCTACTTCAATTCAAATTAATTACAATGAAATATACTT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108536311 90 - 162613886 TTTTCCTCT-AATTTGCATTGTTCAATGTGGTAAATACTAGCTGCTGTATATGGCTACTTGAATTCAAATTCATTACAATGAAATATACTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 145478 87 + 150013 TTTCCCTCG-TATTTGCATTGTTCAATGTAGTAAATACTA---GCTGTATATGGCTACTTCAATTCAAATTAATTACAATGAAATATACTT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55786329 87 + 99891981 TTTTCCTCT-AATTTGCATTGTTCAATGTGGTAAATACTA---GCTGTATATGGCTACTTAAATTCAAATTAATTACAATGAAATATACTT i nomLeu3.chr17 I 4 C 0 s rheMac8.chr3 133482059 86 - 185818997 TTTTCCTCT-AATTTGCATCGTTCAATGTGGTAAATATGA---GCCGTATATGGCTTCTTAAATTCAAATTAATTATGATG-AATACGCTT i rheMac8.chr3 I 4 C 0 s macFas5.chr3 67311747 86 + 192294377 TTTTCCTCT-AATTtgcatcgttcaatgtggtaaatatga---gccgtatatggcttcttaaattcaaattaattatgatg-aatacgctt i macFas5.chr3 I 4 C 0 s macNem1.NW_012011522v1 2793610 87 + 3123512 TTTTCCTCT-AATTTGCATTGTTCAATGTGGTAAATATGA---GCTGTATATGGCTTCTTAAATTCAAATTAATTATGATGAAATACGCTT i macNem1.NW_012011522v1 I 4 C 0 s cerAty1.NW_012000909v1 2514329 87 + 10077455 TTTTCCTCT-AATTTATATTGTTCAATGTGGTAAATATGA---GCCGTATATGGCTTCTTAAATTCAAATTAATTATGATGAAATATGCTT i cerAty1.NW_012000909v1 I 4 C 0 s chlSab2.chr21 5719912 87 + 127223203 TTTTCCTCT-AATTtgcattgttcaatgtggtaaatatga---gctctatatggctacttaaattcaaattaattatgatgaaatacgctt i chlSab2.chr21 I 4 C 0 s manLeu1.NW_012105809v1 1186917 87 - 1799296 TTTTCCTCT-AATTTACATTGTTCAATGTGGTAAATATGA---GCCGTATATGGCTTCTTAAATTCAAATTAATTATGATGAAATATGCTT i manLeu1.NW_012105809v1 I 4 C 0 s colAng1.NW_012115910v1 1764119 86 + 6934359 TTTTCCTCT-AATTTGCATTGTTCAATGTGGTAAATATGA---GCTGTATATGGCTACTTAAATTCAAATTAATTATGATG-AATACACTT i colAng1.NW_012115910v1 I 4 C 0 s calJac3.chr8 108127343 87 - 128169293 TTTTCCTCT-AATTtgcattgttcaatatgttatatacta---gccatatatggctactttaattcaaattaattacaataaagtatactt i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 744347 87 - 18371965 TTTTTCtct-aatttgcattgttcaatgtggtaaatacta---gccatatatggctagtttaattcaaattaattacaatgaaatatactt i saiBol1.JH378145 I 3 C 0 s cebCap1.NW_016107540v1 1404027 87 + 3566421 TTTTCCTCT-AATTtgcattgttcaatgtggtaaatacta---gccatatatggccactttaattcaaattaatttcaataaaatatactt i cebCap1.NW_016107540v1 I 3 C 0 s aotNan1.NW_018514471v1 1906437 87 - 9267652 TTTTCCtct-aatttgcattgttcaatgtggtaaatacta---gccatatatggctactttaattcaaattaattacaataaaatatactt i aotNan1.NW_018514471v1 I 3 C 0 s canFam3.chr18 51776381 83 - 55844845 tttttctctaaacttgAATTATTCAATATGGTGGATGCTA---GACAAATATGTCCCTTTAAAT-----TTAATTACACTTAAATTAAGTT i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66755591 91 - 72422247 I a score=4328.000000 s hg38.chrUn_KI270749v1 71397 1 + 158759 C s panTro5.chr22 3659367 1 + 37823149 A i panTro5.chr22 C 0 C 0 s panPan2.chr7 108536401 1 - 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 145565 1 + 150013 A i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66755682 1 - 72422247 A i ponAbe2.chrUn I 91 I 776 s nomLeu3.chr17 55786416 1 + 99891981 A i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133482145 1 - 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67311833 1 + 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2793697 1 + 3123512 A i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2514416 1 + 10077455 A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719999 1 + 127223203 a i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1187004 1 - 1799296 A i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1764205 1 + 6934359 A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127430 1 - 128169293 c i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744434 1 - 18371965 t i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404114 1 + 3566421 a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906524 1 - 9267652 a i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776464 1 - 55844845 A i canFam3.chr18 C 0 C 0 a score=3266305.000000 s hg38.chrUn_KI270749v1 71398 337 + 158759 AATATTGAA-TTTTTTAGTCACTG-TTGGTTCATTATTGAATATCTTCAGCTAAGATTTCC-----------------CATCTAAATA-CACTAAGAGGTGGTTTAGTTAACTGGTCAT-CCACAAATATTGACACTGATGTTAACTCCTGATATATTCTCTGCAAATAGAATATTCATGAGCCTCCTCCTGAAATCAGCAGCCTAGAGATAGTTTTATAAATTGGATACCAGTTGGAAACCTATATACTCTTTAAGTTTTTGAAATATTAGCTTCCCAGGGAAGAAAATCAAATTCAT---GAGATATGTTAGGACAATTTAACTCAAGATGCTCAAAACTGAAATGATGTATTCTACAA s panTro5.chr22 3659368 335 + 37823149 AATATTGAA-TTTTTTAGTCACTG-TTGGTTCATTATTGAATACGTTCAGCTAAGATTTCC-----------------CATCTAAATA-CACTAAAAGGTGGCTTAGTTAAATGGTCGT-CCACAAATATTGAAGCTGTTGTTAACTCCTGATATATTCTCTGCAAAGAGAATATTCATGAGCCTCCTCCTGAAATCAGCAGCCTATAGATAGTTTTATAAATTGGATACAAGTTGGAAATC--TATACTCTTTAAGTTTTTGAAATATTAGCTTCCCAGGGAAGAAAATCAAATTCAT---AAGATATGTTAGGACAATTTAACTCAAGACGTTCAAAACTGAAATGACATATTCTACAA i panTro5.chr22 C 0 C 0 s panPan2.chr7 108536402 336 - 162613886 AATATTCAA-TTTTTTAGTCACTG-TTGGTTCATTATTTAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTTGTCCCACAAATATTGAAGCTGTTGTTAACTCCTGATATATTGTCTGCAAATAGAATATTCATGAGCTTCCTCCTGAAATCAGCAGCCTAGGGATAATTTTATAAATTGGATACAAGTTGGAAATC--TATACTCTTTAAGGTTTTGAAATATTAGCTTCCCACGGAACAAAATCAAATTCAT---AAGATATGTTAGGACAATTTAACTCAAGACGTTCAAAACTGAAATGACATATTCTACAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 145566 335 + 150013 AATATTGAA-TTTTTTAGTCACTC-TTGGTTGATTATTGAATATCTTCAGCTAAGATTTCC-----------------CATCTAAATA-CGCTAAGAGGTGGCTTAGTTAACTGGTCGT-CCACAAATATTGAAGCTGTTGTTAACTCCTGATACATCCTCTGCAAAGAGAATATTCATGAGCCTCCACCTGAAACCAGCAGCCTACAGATAATTTTATAAATTGGATACAAGTTGGAAATC--TATACTCTTTAAGTTTTTGAAACATTAGCTTCCCAGGGAAGAAAATCAAATTCAT---AAGATACGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAATGACATATTCTACAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55786417 336 + 99891981 AATATTCAA-TTTTTTAGTCACTG-TTGGTTCATTATTTAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-TACTAAGAGGTGGCTTAGTTAACTGGTTGT-CCACAAATATTGAAGCTGTTGTTAATTCCAGATATATTGTCTGCAAATAGAATATTCATGAGCTTCCTCCTGAAATCAGCAGCCTAGGGATAATTTTATAAATTGAATACAAGTTGGATATC--TATACTCTTTAAGTTTTTGAAATATTAGCTCCCCAGGGAAGAAAATCAAATTCATAAGAAGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAATGACATATTCTAC-- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133482146 336 - 185818997 AATATTCCA-TTTTTTAGTCACTG-TTGGTTCATTATGCAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATATTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATC--TATACTCTTTAACTGTTTGAAATATTAGCTTCCCGGGGAAGAAAATCAAATTCAT---AGGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67311834 336 + 192294377 aatattcca-ttttttagtcacTG-TTGGTTCATTATGCAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATATTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATC--TATACTCTTTAACTGTTTGAAATATTAGCTTCCCGGGGAAGAAAATCAAATTCAT---AGGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATACTCTACAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2793698 336 + 3123512 AATATTCCA-TTTTTTAGTCACTG-TTGGTTCATTATGCAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATATTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATC--TATACTCTTTAACTGTTTGAAATATTAGCTTCCTGGGGAAGAAAATCAAATTCAT---AGGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i macNem1.NW_012011522v1 C 0 I 213 s cerAty1.NW_012000909v1 2514417 337 + 10077455 AATATTCCATTTTTTTAGTCACTG-TTGGTTCATTATGCAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATACTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATC--TATACTCTTTAACTGTTTGAAATATTAGCTTCCCAGGGAAGAAAATCAAATTCAT---AGGATATGTTAGGACAATTTAACTCAGGATGTTCAAAACTGAAACGACATATTCTACAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5720000 316 + 127223203 aatattcca-ttttttagtcacTG-TTGGTTCATTATGCAATATCTTTAGCTA-------------------------------------ACTAAGAGGTGGCTTAGTTAACT-GTTGTCTCACAAATATTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATAAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATC--TATAGTCTTTAACTGTTTGAAATATTAACTTCCCGGGGAAGAAAATCAAATTCAT---AAGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1187005 336 - 1799296 AATATTCCA-TTTTTTAGTCACTG-TTGGTTCATTATGCAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-TACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATACTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATC--TATACTCTTTAACTGTTTGAAATATTAGCTTCCCGGGGAAGAAAATCAAATTCAT---AGGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i manLeu1.NW_012105809v1 C 0 I 392 s colAng1.NW_012115910v1 1764206 335 + 6934359 AATATT-CA-TTTTTTAGTCACTG-TTGGTTCATTATGTAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATATTGAAGCTGTTGTTAGCTTCTGATATATTGTCTGCAAATAGAATATTCATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATC--TATACTCTTTAACTGTTTGAAATATTAGCTTCCCAGGGAAGAAAATCAAATTCAT---AAGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127431 338 - 128169293 aatattcaa-ttttttcatcacTGACTGGTTTATTATATAATATATTCAGCTAAGATTTTC-----------------CTTCTAAATGCCACTAAGAGGTGGCTTAGTTAACTGGTTGTCCCACAAGTACTGAAGCTGTTGTTAACTCCTTATATATTGTCTGCATATAGAATATTCATAAACCTCTTCCTAAAATAAACAGCCTAGGGACAATTTTATAAGTGGGATACATGCTGGAAATC--TACACTCTTTAACTTTTTGAAATATTAGCTTCCCAAGGAAGAAAATCATGTTTAT---TAGATACCTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAATGACATATTCTACGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744435 336 - 18371965 aatattcaa--tttttagtcacTGACTGGTTTATTATATAATATTTTCAGCTAAGATTTTC-----------------CATCTAAATACCACCGAGAGGTTGCTTAGTTAACTGGTTGTCCCACAAG-ACTGAAGCTGTTGTTAACTCCTTATATGTTGTCTGAATATAAAATATTCATGAACCTCTTCCTAAAATAAACAGCCTAGGGATAATTTTATAAATGGGATACATGCTGGAAATC--TATACTCTTTAACTTTTTGAAATATTAGCTTCCCAGGGAAGAAAATCATATTCAT---TAGATACCTTAGGACGATTTAACTCAAGATGTTCAAAACTGAAATGACGTATTCTACAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404115 338 + 3566421 aatattcaa-ttttctagtcacTGACTGGTTTATTATATAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATACCACTAAGAGGCGGCTTAGTTAACTGGTTTTCCCACAAGTACTGCAGCTGTTGCTAACTCCTTATATGTTGTCTGCATATAGAATATTCATGAACCTCTTCCTAAAATAAACAACCTAGAGATAATTTTATAAATGGGATACATGCTGGAAATC--TATACTCTTTAACTTTTTGAAATACTAGCTTCCCAGGGAAGAAAATCATATTCAT---TAGATACCTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906525 336 - 9267652 aaaattcaa-ttttttagtcacTGACTGGTTTATTATATAATATCTTCAGCTAAGATTTTC-----------------CATTTAAATACCACTGAGAGGTGGCTTAGTTAACTCGTTGTCCCACAAGTACGGAAGCTGTTGTTAACTCCTTACATGTTGTCTGCATATAGAATATTCATGAACCTCTTCCTAAAATAAACAGCCTAGGGATAATTTTATAAATGGGATACATGCTGGAAATC--TATACTC--TAATTTTTTGAAATATTAGCTTCTCAGGGAAGAAAATCATATTCAT---TAGATACCTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAATGACATATTCTACAA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776465 315 - 55844845 AATGTTTAT-GTTCTTGGGCACTGATTGGCTCATTAAACAATATCTTCAGCCAGAGCTTGCATAACCAGAGACCCCCACTTCTGAGGA-TCATCAGAGCTCCCTTAGTTAACAGTCTCTCTCACAA---------------------------ATGTTGTCTGCTAACAGAATACTTATGAGCCTCTTCCTAAAATCAACACATAAGGAATTATTTTATAATGTGG-TTCATGTTGAAAATC--TATACTCTTTAACTTTTTGAAATATTAGGTTCCCAGAAGTGAAAATCAAATTCAT---AAAATATCTTAAGACAATGCTAGTCAAGATGTTCAAAACCGA----ACATAG------- i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66755683 776 - 72422247 I a score=103542.000000 s hg38.chrUn_KI270749v1 71735 17 + 158759 TATGTGGTAAAACCACC s panTro5.chr22 3659703 17 + 37823149 TATGTGATAAAACCACC i panTro5.chr22 C 0 C 0 s panPan2.chr7 108536738 17 - 162613886 TATGTTATAAAACCACC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 145901 17 + 150013 CATGTGATAAAACCACC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55786753 16 + 99891981 -ATGTTATGAAACCACC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133482482 17 - 185818997 CACGGAATAAAGCCTCC i rheMac8.chr3 C 0 I 340 s macFas5.chr3 67312170 17 + 192294377 CACGGAATAAAGCCTCC i macFas5.chr3 C 0 I 338 s cerAty1.NW_012000909v1 2514754 17 + 10077455 CACGGAATAAAGCCTCC i cerAty1.NW_012000909v1 C 0 I 48 s chlSab2.chr21 5720316 17 + 127223203 CACGGAATAAAGCCTCC i chlSab2.chr21 C 0 I 97 s colAng1.NW_012115910v1 1764541 17 + 6934359 CACGGAATAAAGCCTCC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127769 17 - 128169293 CATATGATAAAATCACC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744771 17 - 18371965 GATGTGATAAAATCACC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404453 17 + 3566421 CATGTGATAAAATCACC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906861 17 - 9267652 CACGTGATAAAATCACC i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776780 17 - 55844845 CATGTGGTAAAACCACC i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66755683 776 - 72422247 I e manLeu1.NW_012105809v1 1187341 392 - 1799296 I e macNem1.NW_012011522v1 2794034 213 + 3123512 I a score=10035.000000 s hg38.chrUn_KI270749v1 71752 1 + 158759 C s panTro5.chr22 3659720 1 + 37823149 C i panTro5.chr22 C 0 C 0 s panPan2.chr7 108536755 1 - 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 145918 1 + 150013 C i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55786769 1 + 99891981 C i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133482839 1 - 185818997 C i rheMac8.chr3 I 340 C 0 s macFas5.chr3 67312525 1 + 192294377 C i macFas5.chr3 I 338 C 0 s cerAty1.NW_012000909v1 2514819 1 + 10077455 C i cerAty1.NW_012000909v1 I 48 C 0 s chlSab2.chr21 5720430 1 + 127223203 C i chlSab2.chr21 I 97 C 0 s manLeu1.NW_012105809v1 1187733 1 - 1799296 C i manLeu1.NW_012105809v1 I 392 C 0 s colAng1.NW_012115910v1 1764558 1 + 6934359 C i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127786 1 - 128169293 C i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744788 1 - 18371965 C i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404470 1 + 3566421 C i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906878 1 - 9267652 C i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776797 1 - 55844845 T i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66755683 776 - 72422247 I e macNem1.NW_012011522v1 2794034 213 + 3123512 I a score=390562.000000 s hg38.chrUn_KI270749v1 71753 44 + 158759 CCTAACAACTTA-------------------------------------------------AAGCAAAACAGGGATTGACCTTAAAGACCTGC s panTro5.chr22 3659721 44 + 37823149 CCTAACAACTTA-------------------------------------------------AAGCAAAACAGGGATTGACCTTAAAGACCTGC i panTro5.chr22 C 0 C 0 s panPan2.chr7 108536756 44 - 162613886 CCTAACAACCTA-------------------------------------------------AAGCAAAACAGGGATTGACCTTGAAGATCTGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 145919 44 + 150013 CCTAACAACTTA-------------------------------------------------AAGCAAAACAGGGATTGACCTTAAAGACCTGC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55786770 44 + 99891981 CCTAACAACCTA-------------------------------------------------AAGCAAAACAGTGATTGACCTTAAAGATCTGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133482840 44 - 185818997 CCTAACAATCTA-------------------------------------------------AAGCAAAACAGGTATTGACCTTAGAGACCTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67312526 44 + 192294377 CCTAACAATCTA-------------------------------------------------AAGCAAAACAGGTATTGACCTTAGAGACCTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2794247 45 + 3123512 CCTAACAACCTA------------------------------------------------TAAGCAAACCAGGGATTGACCCTAAAGACCTGC i macNem1.NW_012011522v1 I 213 I 219 s cerAty1.NW_012000909v1 2514820 93 + 10077455 CCTAACAACCTAAAGCAAACCAGGGATTGACCTTAAAGACCTGTCTTTCCCTAACAATCTAAAGCAAAACAGGTATTGACCTTAGAGACCTGC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5720431 44 + 127223203 CCTAACAACCTA-------------------------------------------------AAGCAAAACAGGTATTGACCTTAGAGACCTCC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1187734 44 - 1799296 CCTAACAATCTA-------------------------------------------------AAGCAAAACAGGTATTGGCCTTAGAGACCTGC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1764559 92 + 6934359 CCTAACAACTAA-AGCAAAAGAGGGTTTGACCTTAAAGATGTGCATTTCCCTAACAACCTAAAGCAAAACAGGGATTGACCTTAAAGACCTGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127787 44 - 128169293 CCTAACAACCTA-------------------------------------------------AAGTAAAACAGGGATTAACCTTAAAGACCTGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744789 44 - 18371965 CCTAACAACCTA-------------------------------------------------AAGTAAAACAGGGATTAACCTTAAAGACCTGC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404471 44 + 3566421 CCTAAAAACCTA-------------------------------------------------AAGTCAAACAGGGATTAACCTTAAAGACCTGC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906879 44 - 9267652 CCTAACAACCTA-------------------------------------------------AAGTAAAACAGGGATTAACCTTAAAGACCTGC i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776798 36 - 55844845 --------TCTA-------------------------------------------------AGTGAACACAAGAATTGATCTTAAAGTTCTGT i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66755683 776 - 72422247 I a score=99747.000000 s hg38.chrUn_KI270749v1 71797 19 + 158759 CTTTTCCTCATCCC-TCAGC---- s panTro5.chr22 3659765 19 + 37823149 CTTTTCCTCATCCA-CCAGC---- i panTro5.chr22 C 0 I 4 s panPan2.chr7 108536800 19 - 162613886 CTTTTCCTCATCCC-CCAGC---- i panPan2.chr7 C 0 I 4 s gorGor5.CYUI01000341v1 145963 19 + 150013 CTTTTCCTCATCCC-CCAGC---- i gorGor5.CYUI01000341v1 C 0 I 4 s nomLeu3.chr17 55786814 19 + 99891981 CTTTTCCTCATTCT-CCAGC---- i nomLeu3.chr17 C 0 I 4 s rheMac8.chr3 133482884 19 - 185818997 CTTTTCCTCATCCC-CCAGC---- i rheMac8.chr3 C 0 I 4 s macFas5.chr3 67312570 19 + 192294377 CTTTTCCTCATCCT-CCAGC---- i macFas5.chr3 C 0 I 4 s cerAty1.NW_012000909v1 2514913 19 + 10077455 CTTTTCCTCATCCC-CCAGC---- i cerAty1.NW_012000909v1 C 0 I 4 s chlSab2.chr21 5720475 19 + 127223203 CTTTTCCTCATCCC-CCAGC---- i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012105809v1 1187778 19 - 1799296 CTTTTCCTCATCCC-CCAGC---- i manLeu1.NW_012105809v1 C 0 I 4 s colAng1.NW_012115910v1 1764651 19 + 6934359 CTTTTCCTCATCCC-CCAGC---- i colAng1.NW_012115910v1 C 0 I 4 s calJac3.chr8 108127831 5 - 128169293 ---------------CCAGC---- i calJac3.chr8 C 0 I 4 s saiBol1.JH378145 744833 5 - 18371965 ---------------CCAGC---- i saiBol1.JH378145 C 0 I 4 s cebCap1.NW_016107540v1 1404515 5 + 3566421 ---------------CCAGC---- i cebCap1.NW_016107540v1 C 0 I 4 s aotNan1.NW_018514471v1 1906923 5 - 9267652 ---------------CCAGC---- i aotNan1.NW_018514471v1 C 0 I 4 s canFam3.chr18 51776834 24 - 55844845 TTTTCCCTCATCCCTTCAACTAAT i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66755683 776 - 72422247 I e macNem1.NW_012011522v1 2794292 219 + 3123512 I a score=358383.000000 s hg38.chrUn_KI270749v1 71816 41 + 158759 CAGTTTTCAAATCTTGC-------------------------------ATTTTATTTCCAAAGGTCCTTATC-- s panTro5.chr22 3659788 41 + 37823149 CAGTTTTCAAATCTTGC-------------------------------ATTTTATTTTGAAAGGTCCTTATC-- i panTro5.chr22 I 4 C 0 s panPan2.chr7 108536823 41 - 162613886 CAGTTTTCAAATCTTGC-------------------------------ATTTTATTTTGAAAGGTCGTTATC-- i panPan2.chr7 I 4 C 0 s gorGor5.CYUI01000341v1 145986 41 + 150013 CAGTTTTCAAATCTTCC-------------------------------ATTTTATTTTGAAAGGTCCTTATT-- i gorGor5.CYUI01000341v1 I 4 C 0 s nomLeu3.chr17 55786837 40 + 99891981 CAGTTTTCAAATCTTGC-------------------------------ATTTCATTTTGAAA-GTCATTATC-- i nomLeu3.chr17 I 4 C 0 s rheMac8.chr3 133482907 41 - 185818997 CATCTTTCAAATATTAC-------------------------------ATTTTATTTCGAAAGGTCGTTATC-- i rheMac8.chr3 I 4 C 0 s macFas5.chr3 67312593 41 + 192294377 CAGCTTTCAAATATTAC-------------------------------ATTTTATTTCGAAAGGTCGTTATC-- i macFas5.chr3 I 4 C 0 s macNem1.NW_012011522v1 2794511 41 + 3123512 CAGCTTTCAAATATTAC-------------------------------ATTTTATTTCGAAAGGTCGTTATC-- i macNem1.NW_012011522v1 I 219 C 0 s cerAty1.NW_012000909v1 2514936 41 + 10077455 CAATTTTCAAATATTAC-------------------------------ATTTTATTTCGAAAGGTCATTATC-- i cerAty1.NW_012000909v1 I 4 C 0 s chlSab2.chr21 5720498 41 + 127223203 CAGTTTTCAAATGTTAC-------------------------------ATTTTATTTCGAAAGGTCGTTATC-- i chlSab2.chr21 I 4 C 0 s manLeu1.NW_012105809v1 1187801 41 - 1799296 CAGCTTTCAAATATTAC-------------------------------ATTTTATTTCGAAAGGTCGTTATC-- i manLeu1.NW_012105809v1 I 4 C 0 s colAng1.NW_012115910v1 1764674 41 + 6934359 CAGTTTTCAAATATTAC-------------------------------ATTTTATTTCGAAAGGTCGTTATC-- i colAng1.NW_012115910v1 I 4 C 0 s calJac3.chr8 108127840 41 - 128169293 CAGTTTTCAAATCTTGC-------------------------------ATTTTATTTTGAAAGGTTATTATC-- i calJac3.chr8 I 4 C 0 s saiBol1.JH378145 744842 41 - 18371965 CCGTTTTCAAATCTTGC-------------------------------ATCTTATTGTGAAAGGTTATTATC-- i saiBol1.JH378145 I 4 C 0 s cebCap1.NW_016107540v1 1404524 41 + 3566421 CAGTTTTCAAATCTTGC-------------------------------ATTTTATTTTGAAAGGTTATTCTC-- i cebCap1.NW_016107540v1 I 4 C 0 s aotNan1.NW_018514471v1 1906932 41 - 9267652 CAGTTTTCAAATCTTGC-------------------------------ATTTTATTTTGAAAGGTTATTATG-- i aotNan1.NW_018514471v1 I 4 C 0 s canFam3.chr18 51776858 72 - 55844845 TAATTTTCAAATCttttttttttgtttgtttcttttttttgttttttAATTTTACCTCTAA--GTACCTATTTT i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66755683 776 - 72422247 I a score=1124330.000000 s hg38.chrUn_KI270749v1 71857 158 + 158759 -----TCCCTAGTCTCTTGTTTCTAGACTCGGCACATATTTAAGTTTGTTACCTCTATCTACTGACTTTTCTCTTTTCAAAC--AGTATCTATGC--CTGT-----------------------CAAAT----------------GTGAACATATAAAAAA-AAATCAGAATGTGCCATTCT---GATTTAAACTGCTTATTAGTTAAAA s panTro5.chr22 3659829 159 + 37823149 -----CCCCTAGTCTCTTGTTTCTAGACTTGGCACATATTTAAGTTTATTACCTCTATCTACTGACTTTTCTCTTTTCAAAC--AGTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACATACAAAAAACAAATCAGAATGTGCCATTCT---GATTTAAACTGCTTATTAGTTAATA i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000341v1 146027 149 + 150013 -----CCCCTAGTCTCTTGTTTCTAGACTTGGCACATA------TTTGTAACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACATACAAAAAA-A---CAGAATGTGCCATTCT---GATTTAAACTGCTTATTAGTTAATA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55786877 141 + 99891981 ------CCCCAGTCTCTTGTTTCTAGACTTGGCACATATCTAACTTTGTTACCTCTATCTACTGACTTTCCTCG-GTCAAAC--AGTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACATACAAAAAACAAATCAGAATG-------------------GCTGCTTATTAGTTAACA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133482948 159 - 185818997 -----CCCCCAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACGTACGAAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTTAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67312634 159 + 192294377 -----CCCCCAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACGTACGAAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTTAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2794552 159 + 3123512 -----CCCCCAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACGTACGAAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTTAACA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2514977 159 + 10077455 -----CCCCCAGTCTCTTGTTTCTAGATTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACGTACGAAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTTAACA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5720539 159 + 127223203 -----CCCCCAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCGTCTCTTCAAAC--GGTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACGTGCGGAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTGAACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1187842 159 - 1799296 -----CCCCCAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACGTACGAAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTTAACA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1764715 159 + 6934359 -----CCCCTAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACCGACTTTCCTCTCTTCAAAC--AGTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACGTAGGAGAAACAAATCAGAATCTGACATCTT---GATTTAAACTGCTTATTAGTTAACA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127881 146 - 128169293 -----CCCTTAGTCTCTTGCTTCTAGACTTTCTACAGA-CTGACGTTGTTAATTCTATCTACTGACTTCCGTCTCTTCAAAC--ATTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACATACAGA-----------AATGGCACATTCT---GATTTAAACTG-TTATTAGTTAACA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744883 146 - 18371965 -----CTCTTAGTCTCTTGCGTCTAGACTTTATACAGA-CTGAAGTTGTTAATTCTATCTACTGACTTTCATCTCTTCAAAC--ATTATTTATGC--CTGC-----------------------CAAAT----------------GCGAACATACAAA-----------AACAGCACGTTCT---GATTTAAACTG-TTATTAGTTAACA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404565 143 + 3566421 -----CCCTTAGTCTCTTGCTTCTAGACTTTATACAGA-CTGAA---GTTAATTCTATCTACTGAGTTTCCTCTCTTCAAAC--ATTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACATACAAA-----------AATGGCACATTGT---GATTGAAACTG-TTATTAGTGAACA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906973 146 - 9267652 -----CCCTTAGTCTCTTGCTTCTAGACTTTATACAGA-CTAAAGTTGTTAATTCTATCTACTGACTTTCCTCTCTTCAAAC--ATTATCTATGC--CTGC-----------------------CAAAT----------------GTGAACATACAAA-----------AATGGCACATTCT---GATTTAAACTG-TTACTAGTTAACA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776930 205 - 55844845 TCTGACAGCTGGATTCTGGTTTCCAGATTTTCCATGTATCCACAAT-ATTACCCCTGCTTTCCGATCTTCCTCTCTTCAAACATATTATCCACACATCTGcaaattaacaaattaacaaattaacaaattaacTCTTACTCTTAAGTAAGAGTATACAAAACAAATATGAATATGTCATTCTCCCGATATAAACTC----ATAGCCAAGG i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66755683 776 - 72422247 I e panPan2.chr7 108536864 0 - 162613886 C a score=453769.000000 s hg38.chrUn_KI270749v1 72015 45 + 158759 CCCTCAAGAT-AACATCTGGGTTCTTAGCTGCAATGAG--TCAAGCCT s panTro5.chr22 3659988 45 + 37823149 CCCTCAAGAT-AACATCTGGGTTGTTAGCTGCAATGAG--TCAAACCT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108536864 45 - 162613886 CCCTCAAGAT-AACATCTGGGTTCTTAGCTGCACTGAG--TCAAGTCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 146176 45 + 150013 CCCTCAAGAT-AACATCTGGGTTCTTAGCTGCAATGAG--TCAAGCCT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55787018 45 + 99891981 CCCTCAAGAT-AACATCTGGGTTCTTAGCTGCACTGAG--TAAAGCCT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133483107 45 - 185818997 CCCTCAAGAT-AACATCTGGGTTCTTAGCTGCGCTGAG--TCAAGCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67312793 45 + 192294377 CCCTCAAGAT-AACATCTGGGTTCTTAGCTGCGCTGAG--TCAAGCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2794711 45 + 3123512 CCCTCAAGAT-AACATCTGGGTTCTTAGCTGCGCTGAG--TCAAGCCT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2515136 45 + 10077455 CCCTCAAGAT-AACATCTGGGTTCTTAGCTGCACTTAG--TCAAGCCT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5720698 45 + 127223203 TCCTCAAGAT-AACATCTGGGTTCTTAGCTGCACTGAG--TCAAGCCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1188001 45 - 1799296 CCCTCAAGAT-AACATCTGGGTTCTTAGCTGCACTGAG--TGAAGCCT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1764874 45 + 6934359 CCCTCAAGAT-AACTTCTGGGTTCTTAGCTGCACTGAG--TCAAGCCT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108128027 45 - 128169293 CCCTCACAAT-AACATCTGGTTTCTTAGCTGCACTGAG--TCAAGCCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 745029 43 - 18371965 GCCTCACGAT-AACATCTGGTTTCTTAGCTGCACT--G--TTAAGGCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404708 45 + 3566421 CCCTCAGGAT-AACATCTGGTGTCTTAGCTGCACTGAG--TCAAGCCT i cebCap1.NW_016107540v1 C 0 N 0 s aotNan1.NW_018514471v1 1907119 45 - 9267652 CCCTCACGGT-AACATCTGGCTTCTTAGCTGCACTGAG--TCAAGCCT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51777135 48 - 55844845 GCTTCAAGATAAAAATCTGTGCTCTCAGCTGCCATATACTTCAAGCTT i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 66755683 776 - 72422247 I a score=450495.000000 s hg38.chrUn_KI270749v1 72060 59 + 158759 ACTTACA------TC---------TTTTTTTGTCTTTCGCTGCACATTTCCTATCTCATCACACTCCAGCAATG s panTro5.chr22 3660033 59 + 37823149 ACCTACA------TC---------TTTTTTTGTGTTTGGCTGCACATTTCCTATCACATCACACTCCAGCAATG i panTro5.chr22 C 0 C 0 s panPan2.chr7 108536909 59 - 162613886 ACTTACA------TC---------TTTTTTTGTCTTCTGCTGCACTGTTCCTTCCACATCACACTCCAGCAATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 146221 58 + 150013 ACTTACA------TC----------TTTTTTGTCTTCAGCTGCACTTTTCCTATCACATCACACTCCAGCAATG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55787063 59 + 99891981 ACTTGCA------TC---------TTTTTTTGCCTTCTGCTGCACTTTTCCTTCCACATCACAATCCAGCAATG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133483152 68 - 185818997 ACTAACA------TCTTTTTTTTTTTTTTTTGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCAGCAGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67312838 68 + 192294377 ACTTACA------TCTTTTTTTTTTTTTTTTGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCAGCAGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2794756 67 + 3123512 ACTTACA------TC-TTTTTTTTTTTTTTTGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCAGCAGTG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2515181 66 + 10077455 GCTTACA------TC--TTTTTTTTTTTTTTGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCAGTAGTG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5720743 67 + 127223203 GCTTACA------tt-tttttttttttttttGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCGGCAGTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1188046 73 - 1799296 GCTTACATCtttttt-tttttttttttttttGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCAGCAGTG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1764919 61 + 6934359 GCTTACA------TC-------TCTTTTTTTGTCTTCTGCTGCACTTTTTCTTCCACATCACACTCCAGCAGTG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108128072 58 - 128169293 GCTCACA------TC----------TTTTCTGCCTTCCGCTTCACTTTTCCTTCCACATCACACTCCAGCAATG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 745072 58 - 18371965 GCTTACA------TC----------TTTTTCACCTTCTGCTTCACTTTTCCTTCCAAGTCACACTCCAACAATG i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1907164 58 - 9267652 ACTCACA------TC----------GAGTTTGCCTTCTGCTTCACTTTTCCTTCCACATCACACTCCAGCAATG i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51777183 56 - 55844845 ACCTGCA------TC---------TTTTTCAGTCTCCCA---GACCCCTCTTTCCATATCATATTCTAGGAATG i canFam3.chr18 C 0 N 0 e ponAbe2.chrUn 66755683 776 - 72422247 I a score=94172.000000 s hg38.chrUn_KI270749v1 72119 11 + 158759 CCAAGCTGTGC s panTro5.chr22 3660092 11 + 37823149 CCAAGCTGTGC i panTro5.chr22 C 0 C 0 s panPan2.chr7 108536968 10 - 162613886 CCAAGCT-TGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 146279 11 + 150013 CCAAGCTGTGC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55787122 10 + 99891981 CCAAGCT-TAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 133483220 11 - 185818997 CCAAGCTGTGC i rheMac8.chr3 C 0 N 0 s macFas5.chr3 67312906 11 + 192294377 CCAAGCTGTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2794823 11 + 3123512 CCAAGCTGTGC i macNem1.NW_012011522v1 C 0 N 0 s cerAty1.NW_012000909v1 2515247 11 + 10077455 CCAAGCTGTGC i cerAty1.NW_012000909v1 C 0 N 0 s chlSab2.chr21 5720810 11 + 127223203 CCAAGCTGTGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1188119 11 - 1799296 CCAAGCTGTGC i manLeu1.NW_012105809v1 C 0 N 0 s colAng1.NW_012115910v1 1764980 11 + 6934359 CCAAGCTGTGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108128130 11 - 128169293 CCAAGCTGTGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 745130 11 - 18371965 TCAAGCTGTGC i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1907222 11 - 9267652 CCAAGCTGTGC i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 66755683 776 - 72422247 I a score=42555.000000 s hg38.chrUn_KI270749v1 72130 11 + 158759 CGGCCTTCTAC s panTro5.chr22 3660103 11 + 37823149 CGGCCTTCTAC i panTro5.chr22 C 0 C 0 s panPan2.chr7 108536978 11 - 162613886 GGGCCTTCTAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 146290 11 + 150013 GGGCCTTCTAC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55787132 11 + 99891981 GGGCCTTCTAC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 67312917 11 + 192294377 AGGCTCTCTAC i macFas5.chr3 C 0 C 0 s chlSab2.chr21 5720821 11 + 127223203 AGGCTTTCTAC i chlSab2.chr21 C 0 N 0 s colAng1.NW_012115910v1 1764991 11 + 6934359 AGGCTTTCTAC i colAng1.NW_012115910v1 C 0 N 0 s calJac3.chr8 108128141 11 - 128169293 AGTCCTTCTAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 745141 11 - 18371965 AGTCCTTCTAC i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1907233 11 - 9267652 AGTCCTTCTAC i aotNan1.NW_018514471v1 C 0 N 0 e ponAbe2.chrUn 66755683 776 - 72422247 I a score=32794.000000 s hg38.chrUn_KI270749v1 72141 17 + 158759 ACCAGATCCACTATTTT s panTro5.chr22 3660114 17 + 37823149 CCCATCTCCACTATTTT i panTro5.chr22 C 0 C 0 s panPan2.chr7 108536989 17 - 162613886 CCCACTTCCACTATTTT i panPan2.chr7 C 0 N 0 s gorGor5.CYUI01000341v1 146301 17 + 150013 CCCATCTCCACTATTTT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr17 55787143 17 + 99891981 TCCATTTCCACTATTTT i nomLeu3.chr17 C 0 N 0 s macFas5.chr3 67312928 17 + 192294377 CCCGTTTCCACTATTTT i macFas5.chr3 C 0 N 0 s calJac3.chr8 108128152 17 - 128169293 CCTTTTTCCACTATTTT i calJac3.chr8 C 0 N 0 s saiBol1.JH378145 745152 17 - 18371965 CCTAATTCCACTATTTT i saiBol1.JH378145 C 0 N 0 e ponAbe2.chrUn 66755683 776 - 72422247 I a score=255.000000 s hg38.chrUn_KI270749v1 72158 5 + 158759 G-CCCC s panTro5.chr22 3660131 6 + 37823149 GCCCCC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000341v1 146318 5 + 150013 -GCCCC i gorGor5.CYUI01000341v1 C 0 I 761 e ponAbe2.chrUn 66755683 776 - 72422247 I a score=1654.000000 s hg38.chrUn_KI270749v1 72163 24 + 158759 GCGTCGTCGCGGATTTTTGCCCCC s panTro5.chr22 3660137 24 + 37823149 CCGCCGCCGCGGCTTTTTGCCCCC i panTro5.chr22 C 0 I 28 e ponAbe2.chrUn 66755683 776 - 72422247 I e gorGor5.CYUI01000341v1 146323 761 + 150013 I a score=0.000000 s hg38.chrUn_KI270749v1 72187 6 + 158759 TCTCCA e ponAbe2.chrUn 66755683 776 - 72422247 I e gorGor5.CYUI01000341v1 146323 761 + 150013 I e panTro5.chr22 3660161 28 + 37823149 I a score=8765.000000 s hg38.chrUn_KI270749v1 72193 39 + 158759 CCGCGGCTTTTTGCCCCCCCGCCGCCACGGCTTTTTGCC s panTro5.chr22 3660189 39 + 37823149 CCGCGGCTTTTTGCCCCCCCGCCTCCGTGGCTTTTTGCC i panTro5.chr22 I 28 I 12 s ponAbe2.chrUn 66756459 37 - 72422247 ccgcggcTTTCTG--CCCCCGCCACCACGGCTTTTTGCC i ponAbe2.chrUn I 776 C 0 e gorGor5.CYUI01000341v1 146323 761 + 150013 I a score=300.000000 s hg38.chrUn_KI270749v1 72232 3 + 158759 GCC s ponAbe2.chrUn 66756496 3 - 72422247 GCC i ponAbe2.chrUn C 0 I 22 e gorGor5.CYUI01000341v1 146323 761 + 150013 I e panTro5.chr22 3660228 12 + 37823149 I a score=0.000000 s hg38.chrUn_KI270749v1 72235 147 + 158759 CGCCGCCACGGATTTTTCCCCACCGCGGTTTTTTGCCCCCCACGCCGCCTCGGGTTTATGCCTGCCGCGGCTTTTTGCCCCCCCACCGCCGCGCCTTTCTGAGCGCCATGGCTTTTTCACCTCGCCGCCGCGGCTTTTTGCCTGACC e ponAbe2.chrUn 66756499 22 - 72422247 I e gorGor5.CYUI01000341v1 146323 761 + 150013 I e panTro5.chr22 3660228 12 + 37823149 I a score=2379.000000 s hg38.chrUn_KI270749v1 72382 26 + 158759 CGGCTTTTTGCCCGCCGCGGCTTTTT s panTro5.chr22 3660240 26 + 37823149 CGGTTTTTTGCCCGCCGCGGCTTTTT i panTro5.chr22 I 12 I 24 e ponAbe2.chrUn 66756499 22 - 72422247 I e gorGor5.CYUI01000341v1 146323 761 + 150013 I a score=0.000000 s hg38.chrUn_KI270749v1 72408 21 + 158759 GCCCGCCGCGGTTTTTTGCAG e ponAbe2.chrUn 66756499 22 - 72422247 I e gorGor5.CYUI01000341v1 146323 761 + 150013 I e panTro5.chr22 3660266 24 + 37823149 I a score=2415.000000 s hg38.chrUn_KI270749v1 72429 26 + 158759 CCCCGCCGCCGCGGCTTTTTGCCTCC s ponAbe2.chrUn 66756521 26 - 72422247 CCCCGCCGCCGCGGCTTTTTGCTTCC i ponAbe2.chrUn I 22 I 99 e gorGor5.CYUI01000341v1 146323 761 + 150013 I e panTro5.chr22 3660266 24 + 37823149 I a score=0.000000 s hg38.chrUn_KI270749v1 72455 129 + 158759 CTGACGCCGCGGCTTTTTGCCGGCCGCGACTTTTTGCCCCCCAGCCGCCGCGGCTTTTTGCCCGACCCGGCTTTTTGCGCCCCCGCCGCAGAGGCTTTTTGCCCCCCCGCCGCCCCGGCTTTTTGTTCG e ponAbe2.chrUn 66756547 99 - 72422247 I e gorGor5.CYUI01000341v1 146323 761 + 150013 I e panTro5.chr22 3660266 24 + 37823149 I a score=6465.000000 s hg38.chrUn_KI270749v1 72584 22 + 158759 CCCGCCGCGGCTTTTTGCCCCC s panTro5.chr22 3660290 22 + 37823149 CCCGCCGCGGCTTTTTGCCCCC i panTro5.chr22 I 24 C 0 s gorGor5.CYUI01000341v1 147084 22 + 150013 CCCGCCGCGGCTTTTTGCCCCC i gorGor5.CYUI01000341v1 I 761 I 93 e ponAbe2.chrUn 66756547 99 - 72422247 I a score=-2209.000000 s hg38.chrUn_KI270749v1 72606 73 + 158759 ACCCCCTCGCTCCGGTGTCGCGGTTATTTGCCCGCCGCGGCTTTTTGCACCCCCCGGTGCCGCCCTTATTTGC s panTro5.chr22 3660312 3 + 37823149 AC----------------------------------------------------------------------C i panTro5.chr22 C 0 C 0 e ponAbe2.chrUn 66756547 99 - 72422247 I e gorGor5.CYUI01000341v1 147106 93 + 150013 I a score=7293.000000 s hg38.chrUn_KI270749v1 72679 27 + 158759 CCGCCGCGGCTTTTTGCCCCCCGCCGC s panTro5.chr22 3660315 27 + 37823149 CCGCCGCGGCTTTTGGCCCCCCGCCGC i panTro5.chr22 C 0 I 56 s gorGor5.CYUI01000341v1 147199 27 + 150013 CCGCCGCGGCTTTTTGCTCCCCGCCGC i gorGor5.CYUI01000341v1 I 93 I 344 e ponAbe2.chrUn 66756547 99 - 72422247 I a score=0.000000 s hg38.chrUn_KI270749v1 72706 75 + 158759 CGCGGGTTTATGCCCGCCGCGGGTTTTCGCTCCCCGCCGCCGCAGCTTTTTGCCCGCCGCAGCGTTTTGCCCTCC e ponAbe2.chrUn 66756547 99 - 72422247 I e gorGor5.CYUI01000341v1 147226 344 + 150013 I e panTro5.chr22 3660342 56 + 37823149 I a score=100.000000 s hg38.chrUn_KI270749v1 72781 1 + 158759 G s gorGor5.CYUI01000341v1 147570 1 + 150013 G i gorGor5.CYUI01000341v1 I 344 C 0 e ponAbe2.chrUn 66756547 99 - 72422247 I e panTro5.chr22 3660342 56 + 37823149 I a score=900.000000 s hg38.chrUn_KI270749v1 72782 3 + 158759 CCG s panTro5.chr22 3660398 3 + 37823149 CCG i panTro5.chr22 I 56 C 0 s gorGor5.CYUI01000341v1 147571 3 + 150013 CCG i gorGor5.CYUI01000341v1 C 0 C 0 e ponAbe2.chrUn 66756547 99 - 72422247 I a score=10137.000000 s hg38.chrUn_KI270749v1 72785 18 + 158759 CCGCGGCTTTTTGCCCCC s panTro5.chr22 3660401 18 + 37823149 CCGCGGCTTTTTGCCCCC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000341v1 147574 18 + 150013 CCGCGGCTTTTTGCCCCC i gorGor5.CYUI01000341v1 C 0 I 335 s ponAbe2.chrUn 66756646 18 - 72422247 CCGCGGCTTTTTGCTCCC i ponAbe2.chrUn I 99 C 0 a score=300.000000 s hg38.chrUn_KI270749v1 72803 1 + 158759 C s panTro5.chr22 3660419 1 + 37823149 C i panTro5.chr22 C 0 C 0 s ponAbe2.chrUn 66756664 1 - 72422247 C i ponAbe2.chrUn C 0 I 131 e gorGor5.CYUI01000341v1 147592 335 + 150013 I a score=1170.000000 s hg38.chrUn_KI270749v1 72804 17 + 158759 CACCATCGCGGCTTTTT s panTro5.chr22 3660420 17 + 37823149 CAACGCCGCGGCTTTTT i panTro5.chr22 C 0 I 49 e ponAbe2.chrUn 66756665 131 - 72422247 I e gorGor5.CYUI01000341v1 147592 335 + 150013 I a score=0.000000 s hg38.chrUn_KI270749v1 72821 5 + 158759 CCCCA e ponAbe2.chrUn 66756665 131 - 72422247 I e gorGor5.CYUI01000341v1 147592 335 + 150013 I e panTro5.chr22 3660437 49 + 37823149 I a score=3231.000000 s hg38.chrUn_KI270749v1 72826 39 + 158759 CCGCGGTTTTTTGCACCCCGCCGCCGCGGCTTTTTGCCC s gorGor5.CYUI01000341v1 147927 39 + 150013 CCGCGGCTTTTTGCTCCCCGCCGCCGGGGCTTTTTGCCC i gorGor5.CYUI01000341v1 I 335 I 82 e ponAbe2.chrUn 66756665 131 - 72422247 I e panTro5.chr22 3660437 49 + 37823149 I a score=0.000000 s hg38.chrUn_KI270749v1 72865 27 + 158759 TCTGACGCCGCGGCTTTTTACCCGACC e ponAbe2.chrUn 66756665 131 - 72422247 I e gorGor5.CYUI01000341v1 147966 82 + 150013 I e panTro5.chr22 3660437 49 + 37823149 I a score=151.000000 s hg38.chrUn_KI270749v1 72892 38 + 158759 CGGCTTTTTGCCCCGCCGCCGCCGAGGCTTTTTCATCT s panTro5.chr22 3660486 15 + 37823149 CGGCTTTTTGCCCCT----------------------- i panTro5.chr22 I 49 C 0 e ponAbe2.chrUn 66756665 131 - 72422247 I e gorGor5.CYUI01000341v1 147966 82 + 150013 I a score=775.000000 s hg38.chrUn_KI270749v1 72930 10 + 158759 CCGCCGCCGC s ponAbe2.chrUn 66756796 10 - 72422247 CCGCCGCCGG i ponAbe2.chrUn I 131 I 28 e gorGor5.CYUI01000341v1 147966 82 + 150013 I e panTro5.chr22 3660501 0 + 37823149 C a score=0.000000 s hg38.chrUn_KI270749v1 72940 27 + 158759 GGCTTTTTCCCGCCGCGGCTTTTTCAC e ponAbe2.chrUn 66756806 28 - 72422247 I e gorGor5.CYUI01000341v1 147966 82 + 150013 I e panTro5.chr22 3660501 0 + 37823149 C a score=200.000000 s hg38.chrUn_KI270749v1 72967 2 + 158759 CC s gorGor5.CYUI01000341v1 148048 2 + 150013 CC i gorGor5.CYUI01000341v1 I 82 C 0 e ponAbe2.chrUn 66756806 28 - 72422247 I e panTro5.chr22 3660501 0 + 37823149 C a score=4125.000000 s hg38.chrUn_KI270749v1 72969 8 + 158759 CCGCCGCC s panTro5.chr22 3660501 8 + 37823149 CCGCCGCC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000341v1 148050 8 + 150013 CCGCGGCC i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 66756834 8 - 72422247 CCGCCGCC i ponAbe2.chrUn I 28 I 320 a score=7227.000000 s hg38.chrUn_KI270749v1 72977 30 + 158759 GCAGCTTTTTGTCGCCGCGGATTTTTGCCC s panTro5.chr22 3660509 30 + 37823149 GCGGCTTTTTGTCACCGCGGATTTTTGCCC i panTro5.chr22 C 0 I 39 s gorGor5.CYUI01000341v1 148058 30 + 150013 GCAGCTTTTTGCCGCTGCGGCTTTTTGCCC i gorGor5.CYUI01000341v1 C 0 C 0 e ponAbe2.chrUn 66756842 320 - 72422247 I a score=400.000000 s hg38.chrUn_KI270749v1 73007 4 + 158759 CCCC s gorGor5.CYUI01000341v1 148088 4 + 150013 CCCC i gorGor5.CYUI01000341v1 C 0 n 0 e ponAbe2.chrUn 66756842 320 - 72422247 I e panTro5.chr22 3660539 39 + 37823149 I a score=0.000000 s hg38.chrUn_KI270749v1 73011 104 + 158759 ACCACCGCGGCTTTTTGCCCCCCCCACCGCGTCTTTTCGCGCGCCTCGGCTTCTTGCCCCCCCGCCGTCGCGGCTTTTTACCCCCTGCCGCCGTGGCCTTTTCC e ponAbe2.chrUn 66756842 320 - 72422247 I e gorGor5.CYUI01000341v1 148092 0 + 150013 n e panTro5.chr22 3660539 39 + 37823149 I a score=5459.000000 s hg38.chrUn_KI270749v1 73115 81 + 158759 CCGCCGCAGCTTTTTGCCCCCCCGCCGCCGCGGCTTTTTCCCCACCGCGGTTTTTTGCC-CCCCGCCGCCGCGGCTTTTTCC s panTro5.chr22 3660578 82 + 37823149 CCGCCGTGGCTTTTTGCGCCCCCGCCGCTGCGGCTTTTTGGCCGCCCCAGGTTTTTGCTACCCCGCCGCTGCGGCTTTTTCC i panTro5.chr22 I 39 C 0 e ponAbe2.chrUn 66756842 320 - 72422247 I e gorGor5.CYUI01000341v1 148092 0 + 150013 I a score=0.000000 s hg38.chrUn_KI270749v1 73196 217 + 158759 CCACCGGGGTTTTTTGCCGCCCCGCCTCCTCGGGTTTATGCCCGCCGCGGCTTTTTGCCCCCCGCCGCCGAGCCTTTCTGCCCGCCGCGGCTTGTTCCCCACGCCGCCGCGGCTTTTTGCCAGGCGCGACTTTTTGCACCCCCGCCGCCGCGGTCTTTTCCGCGCCGAGGCTTTTTGGCCCCTGCCGCCGCGGTCTTTCCCGCGCCGCGGCTTTTTG e ponAbe2.chrUn 66756842 320 - 72422247 I e gorGor5.CYUI01000341v1 148092 0 + 150013 I e panTro5.chr22 3660660 0 + 37823149 C a score=491.000000 s hg38.chrUn_KI270749v1 73413 5 + 158759 CCTCC s panTro5.chr22 3660660 5 + 37823149 CCTCC i panTro5.chr22 C 0 C 0 e ponAbe2.chrUn 66756842 320 - 72422247 I e gorGor5.CYUI01000341v1 148092 0 + 150013 I a score=1185.000000 s hg38.chrUn_KI270749v1 73418 37 + 158759 GCGGATTTTTGCCCGCCGCGGCTTCTTGCCCCCCCGC s panTro5.chr22 3660665 37 + 37823149 GCGGCTTTTTCCCCTCCGCGGCTTTTTGCCCCGCCGC i panTro5.chr22 C 0 N 0 s ponAbe2.chrUn 66757162 9 - 72422247 GCGCATTTT---------------------------- i ponAbe2.chrUn I 320 C 0 e gorGor5.CYUI01000341v1 148092 0 + 150013 I a score=3776.000000 s hg38.chrUn_KI270749v1 73455 100 + 158759 CGACGCCGCTTTTTGCCCGTCGCGGCTTATTGCCCCCCTGCCGCCACGGCTTTTTGCCCCTGCCGCCACGGCTTTTTGCCCCTGCCGCCTCGGCTTTTTG s ponAbe2.chrUn 66757171 62 - 72422247 --------------------------------------TGCCGCCGCGGCTTTTTGTCCCCGCCGCCGCGACTTTTTGCCCCCGCCGCCTAGGTTTTTTG i ponAbe2.chrUn C 0 C 0 e gorGor5.CYUI01000341v1 148092 0 + 150013 I a score=1800.000000 s hg38.chrUn_KI270749v1 73555 3 + 158759 CCC s gorGor5.CYUI01005671v1 20306 3 - 24701 CCC i gorGor5.CYUI01005671v1 I 2837 C 0 s ponAbe2.chrUn 66757233 3 - 72422247 CCC i ponAbe2.chrUn C 0 N 0 s macFas5.chr10 34744983 3 + 96509753 CCC i macFas5.chr10 N 0 C 0 a score=300.000000 s hg38.chrUn_KI270749v1 73558 1 + 158759 C s gorGor5.CYUI01005671v1 20309 1 - 24701 C i gorGor5.CYUI01005671v1 C 0 C 0 s macFas5.chr10 34744986 1 + 96509753 C i macFas5.chr10 C 0 C 0 a score=9572.000000 s hg38.chrUn_KI270749v1 73559 23 + 158759 ATGGCCATCCTCAGAAGCGTTGA s gorGor5.CYUI01005671v1 20310 22 - 24701 ATGGCCATCCTTAGAAGCGT-GA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66987993 22 - 115148730 ACAGCCATCCTCAGAAGCAT-GA i nomLeu3.chr7b N 0 C 0 s macFas5.chr10 34744987 22 + 96509753 ACGGCCATCCTCAGAAGCAT-GA i macFas5.chr10 C 0 C 0 a score=31379.000000 s hg38.chrUn_KI270749v1 73582 45 + 158759 GTGGAACAGAGTGAAGGGAAAGCTGTTTTCTTCTAAAGCTCAAAA s gorGor5.CYUI01005671v1 20332 45 - 24701 GTGGAACAGAGTGAAGGGAAAGCTGTTTTCTTCTAAAGCTCAAAA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988015 45 - 115148730 GTGGAACAGAGTGAAGGGAAAGCTGTTTTCTTCCAAAGATAAAAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745009 45 + 96509753 GTGGAACAGAGTGAAGGGAAAGTTGTTTTCTTCCAAAGATCAAAA i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 854 45 - 17224 GTAGAAAACAGTGAAGAAAACTTTGTTTTCTTCTTAAAGACAAAA i tarSyr2.ABRT02443347v1 N 0 I 100 a score=43065.000000 s hg38.chrUn_KI270749v1 73627 99 + 158759 ATCTTGAACTTTCAAATAGGGATAAGTGTTATTTTTCCTCCAAGCACACATTTGAGACATCTTCCATTTAGCGGATCTGATGATAAACCCACATTTTTT s gorGor5.CYUI01005671v1 20377 99 - 24701 ATCTTGAACTTTCAAATAGGGATAAGTGCTATTTTTGCTCGAAGCACACATTTGAGAAATCTTCCATTTAGCGGATCTGATGATAAACCCACATTTTTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988060 98 - 115148730 TTCTTGAACTTTCAAATAGGGATAAATGGTATttttgcttgaagaacacatttgagaaatcttccatttagcggatctgatgataaa-ccacacttttt i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745054 99 + 96509753 ATCTTGAACTTGCAAATAGAAGTAAATGTAATTTTTGCTCCAAGTACACATTTGAGAAGTCTTCCATTGGATGGACCTGATGATAAACCCACATTCTTT i macFas5.chr10 C 0 C 0 e tarSyr2.ABRT02443347v1 899 100 - 17224 I a score=1512.000000 s hg38.chrUn_KI270749v1 73726 3 + 158759 GTT s gorGor5.CYUI01005671v1 20476 3 - 24701 GTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988158 3 - 115148730 gtt i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745153 3 + 96509753 GTG i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 999 3 - 17224 GCT i tarSyr2.ABRT02443347v1 I 100 I 45 a score=9859.000000 s hg38.chrUn_KI270749v1 73729 38 + 158759 TGTTTTAATCTGAAAATGTATTTCTCTGGTTCTTGGA--C s gorGor5.CYUI01005671v1 20479 36 - 24701 T----TAATCTCAAAATGTATTTGTATGGTTCTTGGAAAT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988161 39 - 115148730 tgttttaatctgaaaatgtatttgtatgtttcttgga-aa i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745156 37 + 96509753 T--TTTAATCGGAAAATGTATTTATGTGATACTTGGA-AA i macFas5.chr10 C 0 C 0 e tarSyr2.ABRT02443347v1 1002 45 - 17224 I a score=-1294.000000 s hg38.chrUn_KI270749v1 73767 1 + 158759 -T s gorGor5.CYUI01005671v1 20515 1 - 24701 -T i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988200 1 - 115148730 -t i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745193 1 + 96509753 -T i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 1047 1 - 17224 A- i tarSyr2.ABRT02443347v1 I 45 I 61 a score=25336.000000 s hg38.chrUn_KI270749v1 73768 58 + 158759 --TTTTTTGCATATAAGATTATATTTTATCATCTTATTTCAAGTT-TTATTTACCATTTGA s gorGor5.CYUI01005671v1 20516 58 - 24701 --TTTTTTGCATATAAAATTACATTTTATCAGCTTATTTCAAGTT-TTATTTACCGTTTGA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988201 58 - 115148730 --ttttttgaatataaaattatattttatcagcttatttcaagtt-ttatttaccatttga i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745194 61 + 96509753 AATTTTTTGATTATAAAATTATATTTTAGCATCTTATTTCAAGTTGTTATTTACGATATGA i macFas5.chr10 C 0 C 0 e tarSyr2.ABRT02443347v1 1048 61 - 17224 I a score=-750.000000 s hg38.chrUn_KI270749v1 73826 2 + 158759 -TG s gorGor5.CYUI01005671v1 20574 2 - 24701 -TA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988259 2 - 115148730 -ta i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745255 2 + 96509753 -TA i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 1109 2 - 17224 TT- i tarSyr2.ABRT02443347v1 I 61 I 20 a score=7824.000000 s hg38.chrUn_KI270749v1 73828 20 + 158759 ATTACT-CTTAAAATGTCCTT s gorGor5.CYUI01005671v1 20576 20 - 24701 ATTACT-CTTAAAATGTCCTT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988261 20 - 115148730 attact-cctaaaatgtcatc i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745257 21 + 96509753 ATTACTCCCCAAAATGTCATT i macFas5.chr10 C 0 C 0 e tarSyr2.ABRT02443347v1 1111 20 - 17224 I a score=1422.000000 s hg38.chrUn_KI270749v1 73848 2 + 158759 GA s gorGor5.CYUI01005671v1 20596 2 - 24701 GA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988281 2 - 115148730 ga i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745278 2 + 96509753 GA i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 1131 2 - 17224 GG i tarSyr2.ABRT02443347v1 I 20 I 33 a score=10460.000000 s hg38.chrUn_KI270749v1 73850 27 + 158759 TT-----AAAGAATCATCTATTGCTCCAACTG s gorGor5.CYUI01005671v1 20598 27 - 24701 TT-----AAAGAATCATCTATGGCTCTAACTG i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988283 31 - 115148730 tt-aaagaaagaatcatctattgctccaacta i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745280 32 + 96509753 TTAAAAAAAAAAATCATCTGTTGCTCTAACTA i macFas5.chr10 C 0 C 0 e tarSyr2.ABRT02443347v1 1133 33 - 17224 I a score=4046.000000 s hg38.chrUn_KI270749v1 73877 10 + 158759 CTCTTTACTA s gorGor5.CYUI01005671v1 20625 10 - 24701 CTCTTTACTA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988314 10 - 115148730 tcctttacta i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745312 10 + 96509753 TCCTCCACTG i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 1166 10 - 17224 TTCTTGTTTG i tarSyr2.ABRT02443347v1 I 33 I 340 a score=162510.000000 s hg38.chrUn_KI270749v1 73887 341 + 158759 AAGGTAATTT-GTCTTTTCATCCTCATCAGGCTCCTTTTAAGCTCTCAAACTGACCTT-----ATTTTTTTTTACAGATTCAATGCATTAAGTCAatttattatttatgatgaatttatttatgtatttatttTCACTATCACAAGTAGAAAAAGCCTGTAAGTTGCTATGCCAAAAAGCTGCCTCTAGATGGCAAACAAACCCCACAATACACAAAAGAGAGCCAAATTCTTAGAAACCCTGGGAAAGGAAGAGGGCTACTGTCCCATTAACAACTTGGAGCCCTTAAGGCAAGAATGAGGTGGAACATCTGG---------GAGGAGACACCAGGGTGCGGAGTAGTGGGGAAC s gorGor5.CYUI01005671v1 20635 349 - 24701 AAGGTAATTTTGTCTTTTCAACCTCATCAGGCTCCTTTTAAGCTCTCAATCTGACTTT-------TTTTTTAAACAGATTCAATGCATTAAGTCAatttattatttatgatgaatttatttatgtatttatttTCGCTATCACAAGTAGAAAAAGCCTATAAGTTGCTATGCCAAAAACCTGCCTCTAGATGGCAAACAAACCCCACAATGCACAAAAGAGAGCCAAATTCTTAGAAACCCTGGGAAAGGAAGAGGGCTACTGTCCCATTAACAACTTGGAGTCCCTAAGGCAAGAATGAGGTGGAACATCTGGAACATCTGGGAGGAGACACCAGGGTGCGGAGTAGTGAGGAAC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988324 350 - 115148730 aaagtaattt-gtctttttaacctcatcaggctccttttaaACTCTCAAACTGACCTT-----ATTTTTTTTAACAGATTCAATGCATTAAGTCAATTTATTCTTCATGATGAATTTATTTATGTGTTTATTTTCGATATCACAAGTAGAAAAAGCCTGTAAGTTGCTATGCCAAAAACCTGCCTCTAGATGGCAAACAAACCCCACAATACACAAAAGAGAGCCAAGTTCTTAGAAACCCTGGGAAAGGAAGAGGGCTACTGTCCCATTAACAACTTGGAGCCCTTAAGGCAAGAATGAGGTGGAACATCTGGAACATCTGGGAGGAGACACCAGGGTGCGGAGTAGTGAGGAGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745322 354 + 96509753 AAAGTAATTT-CTCTATTTAACCTTATCAGACTCCTTTTAAGCTCTGAAACTCATCttttttttttcttttttactgatttgatacattaagtcaatttattatttatggcaaatttatttatgtaattatttTCGATATCACAAGTAGAAAAAGCCAGTAAGTTGCTATACCAAAAACCTGCCTCTA-ATGACAAACAAACCCCACAATACACAAAAGACAGCCAAGTTCTTAGACACCCTGGGAAAGGAAGAGGGCTACTGTCCCATTAACAAATTGGAGCTCTTAAGGCAAGAATGAGTTGGAACATCTGGAACATCTGAGAGGAGACAGCAGGCTGTGGAGTAGTGGGGAAC i macFas5.chr10 C 0 C 0 e tarSyr2.ABRT02443347v1 1176 340 - 17224 I a score=1000.000000 s hg38.chrUn_KI270749v1 74228 1 + 158759 C s gorGor5.CYUI01005671v1 20984 1 - 24701 C i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988674 1 - 115148730 C i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745676 1 + 96509753 C i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 1516 1 - 17224 C i tarSyr2.ABRT02443347v1 I 340 I 69 a score=33228.000000 s hg38.chrUn_KI270749v1 74229 63 + 158759 TGCTCTGTGCGCTGAGACTGAAAGCCCAGCCTTGCCTCTCACCGCTGCCTTGACTGTGTCCCG s gorGor5.CYUI01005671v1 20985 63 - 24701 TGCTCTGTGCTCTGAGAATGAAAGCCCAGCCTTGCCTCTCACCGCTGCCTTGACTGTGTCCCC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988675 63 - 115148730 TGCTCTGTGCTCTGAGACTGAAAGCCCAGCCTTGCCTCTCACCGCTGCCTGGACTGTGTCCCC i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745677 63 + 96509753 TGCTCTGTGCTCTGAGACTGAAAGCCCAGCCTTGCCTCTCACCGCTGCCTTGACTGTGTGCCC i macFas5.chr10 C 0 C 0 e tarSyr2.ABRT02443347v1 1517 69 - 17224 I a score=-1486.000000 s hg38.chrUn_KI270749v1 74292 3 + 158759 ATG- s gorGor5.CYUI01005671v1 21048 3 - 24701 ATC- i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988738 3 - 115148730 AGC- i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745740 3 + 96509753 ATC- i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 1586 3 - 17224 -TTG i tarSyr2.ABRT02443347v1 I 69 I 2924 a score=53438.000000 s hg38.chrUn_KI270749v1 74295 106 + 158759 TGCTGTGAAGTGAATGATGTCTTCTAAATTCATGCTGAGCCCTAATTGCTGAAAAGTGTAAGACATGCAATGGGGGGATTATGTGCATCTTCCCGACACCAACATG s gorGor5.CYUI01005671v1 21051 106 - 24701 TGCTGTGAAGTGAATGGTGTCTTCTAAATTCATGCTGAGCCCTAATTGCTGAAAAGTGTAAGACATGCAATGGGGGGATTATGTGCATCTTCCCGACACCAATATG i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988741 106 - 115148730 TGCTGTGAAGTGAATGGTGTCTTCTAAATTCATGCTGAGCCCTAATTGCTGAAAAGTATAAGACATGGAATGTGGGGATTATTTGCACCTTCCCGACACCAACATG i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745743 106 + 96509753 TGCTGTGAAGTGAATGGTGCCTTCTAAATTCATGCTGAGCCTGAATTGCTGAAAAGTGTATGACCTGGAATGTGGGGATTATGTGCATCTTCCCAACACCAACATG i macFas5.chr10 C 0 C 0 e tarSyr2.ABRT02443347v1 1589 2924 - 17224 I a score=910.000000 s hg38.chrUn_KI270749v1 74401 1 + 158759 A s gorGor5.CYUI01005671v1 21157 1 - 24701 A i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988847 1 - 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745849 1 + 96509753 A i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 4513 1 - 17224 A i tarSyr2.ABRT02443347v1 I 2924 I 527 a score=138749.000000 s hg38.chrUn_KI270749v1 74402 232 + 158759 TGCTCAGGAAGGAGACTTCTTGTTTTCTCTTAGGATTCT-TTTACTAACCAAGATTTTGCCTCTACTGCATATTTCCCTTTGCTGATTGTCCCTCCCTTTTGACAGAAGATGGCCCAGGGCATTCAGTACT--AAGTCTCAACCTCTTACCCAAAGCCCTCAGTCTAGTGTT---GCTC-TTTCTTTCATGCTATTTT-TGTTTGTTTCTTTTCTTGTAATCATCTTGGCAATAAAATAA s gorGor5.CYUI01005671v1 21158 231 - 24701 TGCTCAGGAAGGAGACTTCTTGTTTTCTCTTAGGATTCT-TTTACTAACCAAGATTTTGCCTCTACTGCATATTTCCCTTTGCTGATTGTCCCTCCCTTTTGACAGAAGATGGCCCAGGGCATTCACTACT--AAGTCTCAACCTCTTACC-AAAGCCCTCAGTCTAGTGTT---GCTG-TTTCCTTCATGCTATTTT-TGTTTGTTTCTTTTCTTGTAATCCTCTTGGCAATAAAATAA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66988848 232 - 115148730 TGCTCAGGAAGGAGGCTTCTTGATTTCTCTTAGGATTCT-TTTACTAACCAAGATTTTCCCTCTACTGCACATTTCCCTTTCCTGATTGTCCGTCTCTGTTGACAGAAGATGGCCCAGGGGATTCACTACT--GAGTCTCAACCTCTTACCCAAAGCCCTCAGTCTAGTGTT---GCTC-TTTCCTTCATGCTATTTT-TGTTTGTTTCTTTTCTTGTAATCATCTTGGCAATAAAATAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34745850 228 + 96509753 TGCTCAGGAAGGAGACTG-TTGCTTCCTGTTAGGATTCT-TTTGCTCACCAAGATTTTGCCTCTACTGCACATTTCTCTTTCCTGATTGTCCCTCTCTATTGACAGAAGATGGCCCAGGGGATTCACTACT--AAGTCTCAAGCTCTTACCCAAAGCCCTCAGTCTAGGGTT---GCTCTTTTCCTTCATGCTATTTT-TGTTTG----TTATCTTGTAATCGTCTTAGCAATAAAATAT i macFas5.chr10 C 0 I 309 s tarSyr2.ABRT02443347v1 5041 231 - 17224 TGCTCCAGAAGGAGACTT-CTCTTTCATCTTAGGCTTCTGGTTAGTAACCAAGATTTTGTCTTTAATGTACATCCCTTTTCCCTGATTATCTCTCTCCTCTGAAAGCTGATAGCCCATGTGTGTCATTAAGGAAAATCTCACCCTCTTACCCAATGACTTGAGtttagtgttttcgttt-ttacttccatgttattttgtgttttttgtttttgtt-------tttttGTGGTGACATAT i tarSyr2.ABRT02443347v1 I 527 C 0 a score=184405.000000 s hg38.chrUn_KI270749v1 74634 320 + 158759 TCAGTTT---TTTCTTTCTACCTATTAAAGATGTTACCTTAGTTAATTACAGTGGTTTCCTTCAGAATGATAAATGGTCTTTCAAAATGATGTAAAGA----GATCTAAATCCGTGTGCTCCAGAAGTTGAATGAAG-------ATCTGTCTAGCACGGGTGCCAGTGACTCTCCCAGAGTGCTCCATGCAGCTGGCCCCACAGAGTCCCTCTGTGCTGTCA------TATCACCCACTGCCTTCTGTGAATGAGATATTCTGATTAGAATCCTGGTGGATGCTATTTGAGCCAGTGCCCCCACAACT--CCTATGAAAGCTGAGGACCACAGGCCCCTGAA s gorGor5.CYUI01005671v1 21389 320 - 24701 TCACTTT---TTTCTTTCTACCTATTAAAGATGTTACCTTAGTTAATTACAGTGGTTTCCTTCAGAATGATAAATGGTCTTTCAAAATGATGTAAAGA----GATCTAAATCCGTGTGCTCCAGAAGTTGAATGAAG-------CTCTGTCTAGCACGGGTGCCAGTGAGTCTCCCAGAGTGCTCCATGCAGCTGGCCCCACAGAGTCCCTCTGTGCTGTCA------TATCACCCACTGCCTTCTGTGAATGAGATATTCTGATTAGAATCCTGGTGGATGCTATTTGAGCCAGTGCCCCCACAACT--CCTATGAAAGCCGAGGACCACAGGCCCCTGAA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66989080 323 - 115148730 TCACTTT---TTTCTTTCTACGTATTAAAGATGTTACCTTAGTTAATTACAGTGGTTTCCTTCAGAATGATATATGGTCCTTCAAAATGATGT--AGA----GATCTAAATCCGTGTGCTCCAGAAGTTGCATGAAG-------CTCTGTCTAGCATGAGTGCCAGTGACTCTCCCAGAGTGCTCCATGCAGCTGGCCCCACGGAGTCCCTCTGTGTTGGCAGTGGGCGACAACCCACTGCCTTCTGTGAATGAGAGATTCTGATTAGAATCCTGGTGGATCCACTTTGAGCCAGTGCCCGCGCAATT--CCCATGTAAGCTAAGGACCA-AGTCCCCTGAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34746387 320 + 96509753 TCACATT---TTCCTTCCTAGTTATTACATAAGTTATCATAGTTAATTACAATGGCTGCCTTCTGAATAATAAATAGTCCTTCAAAATGATGTTAAGA----GATCCGAATCCGTGTGCTTCAGAAGTTGCAAGAAG-------CTCTGTCTAGCCCAGGTGCCAGTGACTCTCCTGGAGTGCTCCATGCATCTGGCCCCACAGAGTCCCTCTGTGCTGTCG------TATCACCCACCGCCTTCTGTGAATGAGATATTCTGATAAGAATCCCGGTGGATGCTCTTTGAGCCAGTTTCCACACAAAT--CCCATGAAAGCTGAGGACCACAGGCCCCTGAA i macFas5.chr10 I 309 C 0 s tarSyr2.ABRT02443347v1 5272 323 - 17224 TAAATTTACCTTTGGTTCTGAGTTTTCCAAATGCTATTTTAATCAAC-----TGATCATCTTCAGAATAATCAACAGACTTGCAAAATTGTGTTAAAATTATGATTCAAATCCATGTGCTCAGGAAGTGGCATGATGAGCCACACCTTGTCTAGCAGAGGCACCAGTGCCTCTCTCAGAAT--------CTACTGGCCCAGCAGAATCACTCTCTGTTGGAA------TATTACCTATTGCCTTTTGTGAATCAGATTTTCTGATTAAATTCCTAGTGGTGTATATTTGAGTCAAGGGACACTCATTCTGTCCGAGAAAACTGAGGATCACAAGCCCTTTAA i tarSyr2.ABRT02443347v1 C 0 I 323 a score=79004.000000 s hg38.chrUn_KI270749v1 74954 129 + 158759 GACAATCACAGGTCTCTAGACTCACAGCTCATGACCGTCCTCTGCAGACACAGCTTCTCCCCGGATGGCTGAGGGTTGTCATTGGCTGTGTCCTTCCTTGTGCATGACAACAGGAGACATAGAAGGTC--T s gorGor5.CYUI01005671v1 21709 129 - 24701 GACAATCACAGGTCTGTAGACTCACAGCTCATGACCGTCCTCTGCAGACACAGCTTCTCCCCGGATGGCCGAGGTTTGTCATTGGCTGTGTCCTTCCTTGTGCATGACAACAGGAGACATAGAAGGTC--T i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66989403 129 - 115148730 GACAATCACAGGTCTCTAGACTCACAGCTCATGACTGTCCTCTGCAGACACAGCTTCTCCCCAGATGGCTGAGGGTTGTCATTGGCTGTGTCCTTCCTTGTGCATGACAGCAGGAGACATAGAAGGTC--T i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34746707 131 + 96509753 GACAATCACAGTTAGCCTGACCCATAGCTCATGATAGCCCTCTGCAGACACAGGTTCTCCCCAGATGGCTGAAGGTAGTCATTGGCTGTGTCCTTCCTTGTGCATGACAACAGGAGACAGAGCAGGTCTGT i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 5918 123 - 17224 GACAGTAAGAGATCTGAAGGATTATA------AATCTCCCTCCGTAAGGATAGCTTCTCTCTACATGGTTAAGTGCTGTCTTTGGCTATGTCATTTCTTGGGCATCATAATTGGGGACAGAGAAGATC--T i tarSyr2.ABRT02443347v1 I 323 I 38 a score=177362.000000 s hg38.chrUn_KI270749v1 75083 373 + 158759 GTAAGCAGCCCTGCAAGCCAGGTTCTGAGCAAGCCCTCCTGTGTGGGGCCCTCTTACCTGGACATAGGTGAgtaaaacaaaaatgaaactctaagctccctaaccaactgaatgaactcctcctctcagccaaggacacaccaaaatcaacctgaaatacaa-tgcagtccatgatcggaacggatgattggatatgcctgaacttaccctcttccctttaaaattcaggcacaactgaccagcttttaatatgaagacagagaccttgagactgacaaagaaaactctttatagcaataagataccaatgtgacagataccatgtcctaagagaaatcaaagtattttccccaagatattgttatttaatgtt s gorGor5.CYUI01005671v1 21838 371 - 24701 GTAAGCAGCCCTGCAAGCCAGGTTCTGAGCAAGCCCTCCT-TGTGGGGCCCTCTTACCTGGACATAGGTGtgtaaaccaaaaatgaaactctaagttccctaaccaactgagtgaactcctcctctcagccaaggacacaccaaaatcaacctgaaatacaa-tgcagtccatgatcggaacggatgattggatatgccttaacttaccctcttccctttgaaattcaggcacaactgaccagcttttaatatgaagacagagaccttgagactggcaaagaaaactccttatagcaataagataccaatgtgacagataccacgtcctaagagaaatcaaagtattttccccaagatattgttatttaatg-t i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66989532 372 - 115148730 GTAAGCAGCCCTGCAATCCAGGTTCTGAGCAAGCCCTCCTGTGTGGGGCCTTCTTACCTGGACATAGGTGtgtacaccaaaaatgaaactctaagctcccaaaccaactaaatgaactcctcctctcagccaaggacacaacaaaatcaacctgaaatacaa-tgcagtccatgatcagaaaggatgattgcatatgccttaacttaccctcttccctttaaaattcaggcaaaactgaccagcttttaatatgaagacagacaccttgagactgacaaagcaaactctttatggcaataagataccaacgtgacagataccatgtcctaagagaaatcaaagtattttctccaagatattgttatttaatg-t i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34746838 373 + 96509753 GTAAGCAGCCCTGCAAGCCAGGTTCTGTGCAAGCCCTCCTGTGTGAGTCCCTCTTACCTGGACACAGGTGtgtaaaccaaaaatgacactatatgctctctagccaactgcataaactcctcctctcagccaagaacacaccaaaatcaacctgaaatacaagtacaggccatgatgggaatggatgattgaatatgccttaatttacctaccaccctttacaattcagacacaactgaccagtttttgatattaagacagagaccttgagactgacaaaggaaactctttatagtagtaagataccaacatgacagataccaggctcgaggagaaatcaaggtattttctccaagatattgttatttgatg-t i macFas5.chr10 C 0 I 1 e tarSyr2.ABRT02443347v1 6041 38 - 17224 I a score=273.000000 s hg38.chrUn_KI270749v1 75456 1 + 158759 a s gorGor5.CYUI01005671v1 22209 1 - 24701 a i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66989904 1 - 115148730 a i nomLeu3.chr7b C 0 C 0 e tarSyr2.ABRT02443347v1 6041 38 - 17224 I e macFas5.chr10 34747211 1 + 96509753 I a score=254675.000000 s hg38.chrUn_KI270749v1 75457 522 + 158759 tttaaaaatgcctctgcaaagctggttcttgtgggaaaaatctacattctgtagagatt------cctttttaaatctctttcctgacccagagagatttaactaagagtttggcaccttttaagtctactaagaaacaattacaatctattctctctgaagcctgctacctggaggcttcatctgcatgatgcaaccttggctccaaaaccctttttctaaacccagaaactcccttgtgttgattacaggtcattagataaacgctttcaaccacctatgaaatctctgaatccacctatgacctggaagtccccaacatcccccctccttcgggctgtcctgcctttccatatcaaagcaatgtacagcttacacgtattgattgatatcttatgtctccctaaaacgtgtaaaaccaacctgtagcccgacaacctttgacacacgttctcaagacctcctgaggctgtttcactgatatttctttaactttgaccaaataaatttctaaactgattgagactt s gorGor5.CYUI01005671v1 22210 522 - 24701 tttaaaaatgcctctgcaaagctgattcttgttggaaaaatctacattctgtagagatt------cctttttaagtctctttcctgacccagacagatttaactaagagtttggcaccttttaagtctactaagaaacaattacaatctattctctctgaagcctgctacctggaggcttcatctgcatgatgcaaccttggctccaaaaccctttttctaaacccagaaactcccttgtgttgattacaggtcattagataaacgctttccaccacctatgaagtctctgaatccacctatgacctggaagtccccaacatcccccctccttcgggctgtcctgcctttccatatcaaagcaatgtacagcttacacgtattgattgatatcttatgtctccctaaaacgtgtaaaaccaacttgtagcccgacgacctttgacacacattctcaagacctcctgaggctgtttcactgatatttctttaactttgaccaaataaatttccaaactgattgagactt i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66989905 526 - 115148730 cttgaaaatgcctctgcaaagccggttcttgtggg-aaaatctacattctgtagagattcctacccctttttaagtctctttcctgacccagagagatttaactaagagtttggcaccttttaagtcagctaagaagcaattacagtctattctctctgaagcctgctacctggaggcttcatctgcatgatgcaaccttggctccaaaaccctttttctaaacccagaaactcccttgtgttgattacaggtcattagataaactctttcaaccccttatggaatctttgaatccacc-atgacctggaagtccccaacatcccccctccttcgggctgtcctgcctttctgtatcaaagcaatgtacagcttacacatattgattgatatcttatgtctccctaaaacgtgtaaaaccaacctgtagcccgaccaccttgggcacacgttctcaagacctcctgaggctgtttcactgatacgtctttaactgtgaccaaataaatttctaaattgattgagactt i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34747212 524 + 96509753 tttgaaaatgtctctgcaaagctgtttcttgtgggaaaaatccatattctgtagagattcctacccctttttaagtctctttccggacccagagagatttaacta--agtatggcacctttt-agtctgctaagaaacaattacaatctattctctctgaagcctgctacctgggggcttcatcttcatgatgaaaccttggctccacgaccctttttctaaacctagaaactcccttctgttgattacaggtcattagataaactctttcc-tcttttatgaaatctttgaatccacctatgacccggaagtccccaacacgccccctccttcgggctgttcagcctttccatagcaaagcaatgtacagcttacacatattgattgatatcttatgtctccctaagacatgtaaaaccaagctgtagcccgaccatcttgggcacacattcttaagaccttctgaggctatttcactgatatgtctttaactttgaccaaataaatttctaaaatgaatgtgactt i macFas5.chr10 I 1 C 0 e tarSyr2.ABRT02443347v1 6041 38 - 17224 I a score=17265.000000 s hg38.chrUn_KI270749v1 75979 32 + 158759 ttctcagatacttatttgttcataGGTATCAC s gorGor5.CYUI01005671v1 22732 32 - 24701 ttctcagatacttatttgtttataGATATCAC i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66990431 32 - 115148730 ttctcagggacttatttgtttataGGTGTCAC i nomLeu3.chr7b C 0 I 5598 s macFas5.chr10 34747736 32 + 96509753 gtctcagatacttGTTTATTTGTGGGTATCAC i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 6079 32 - 17224 TCCTCTGAGTCTTACCTGGACATGGATGGCAC i tarSyr2.ABRT02443347v1 I 38 C 0 a score=281611.000000 s hg38.chrUn_KI270749v1 76011 463 + 158759 TGGATACACTTAAGGAATTGAAGAGATTTATGACATTGAGAAAAGGAGGAAGCCAGGGTGTATGgagagagagagaga------g--------------agagagaTTGTGATGTATGTACAGGACTAACACTGAGACCTGGTTATGTAATGGTGCAGTACTGAGTATCATCCCCAAATAGTGAGGTTTCATTCCAAGAAGACTATGCATGTATCTCATTTGGGGAAACAGCTTTTGCAGGTGTAAATTAAGGAGCTTGAAACAGGGAGATATTCTTAGATTAATCAACTGGGACTTAAATGCAAACTCAAGTGTCCT-AAAAAAACCAAGAGGTAGAGAGACATTTAGCATAGACTGAAGTggagaaggcaatgtgaacacagagacagagattgcagtgatgtgtccacatcccgggagag--agaagccaccagaagctggaagagctaaatcagactgccccc-tagagcttcagaaggagcc s gorGor5.CYUI01005671v1 22764 472 - 24701 TGGATACACTTAAGGAATTGAAGAGATTTATGACATTGAGAAAAGGAGGAAGCCAGGGTGTGTGgagagagagagaga------gagaaagac------agagagaTTGTGATGTATGTACAGGACTAACACTGAGACCTGGTTATGTAATGGTGTAGTACTGAGTATCATCCCCAAATAGTGAGGTTTCATTCCAGGAAGActatgcatgtatctcatttgggaaaacagcttttgcaggtgtaaattaaggagcttgaaacagggagatattcttagattaatcaactgggacttaaatgcaaattcaagtgtcctaaaaaaaaacaagaggtagagagacatttagcatagactgaagtggagaaggcaatgtgaacacagagacagagattgcagtgatgtgtccacatcccgggagag--agaagccaccagaagctggaagagctaaatcagactgctccc-tagagcttcagaaggagcc i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66996061 477 - 115148730 TGGATTCACTTAAGGAAGTGAAGAGATTTATGACATTGAGAAAAGGAGGAAGCCAGGGTGTGTGgagagagaaagaga------gaaagagaaagagagagagagaTTGTGATGTATGTACAGGAGTAACACTGAGACCTGGTTATGTAATGGTGTAGTACTGAGTATCATCCCCAAATAGTGAGGTTTCACTCCAAGAAGACTATGCATGTATCTTATTTGGGAAAACGGCTTTTGCAGGTGTAAATTAAGAAGCTTGAAACAGGGAGATGGTCTTAGATTAATCAACTGAGACTTAAATGCATACTCAAGTGTCTT-AAAAAAAACAAGAGGTAGAGAGACATTTAGCATAGACTGAAGTggagaaggcaatgtgaacacagagacagagattgcagtgatgtgtccacatcctaggagag--agaagtcaccagaagctggaagagctaaatcagactgctctc-tagagcttctgaaggagcc i nomLeu3.chr7b I 5598 C 0 s macFas5.chr10 34747768 484 + 96509753 TGGACACACTTAAGGATGTGAAGAGATTTATGACAATGAGAAAAGGAGGAAGCCAAGATGTGTGgagagagagagagacagagtgagagagagagagagagagagagagagaTGTTTGTACAGGACTAACCCTGAGAAGTGTTTCTGTAATCATGTAGTACTGAGTATCATCCCCAAAGAGTGAGGTTTCATTCCAAGAAgaatatgcatgtattttatttgggaaaagggcttttgcaggtgtaaattaaggagcttgaaacaaggagatgatcttagattaatcaactgggccttaaatgcgaacacaagtgtcct-gagaaaaacaagaggtagagagacacttaccatagactgaagaggagaaggcaatgtgaacacagagacagagatcgcagtgatgtgtccacagccaaggagag-tggaagccaccagaagctggaagagttaaatcagactgctccc-tagagcttctgaaggagat i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 6111 440 - 17224 TGAACATACTTAGGAAATTGAAGTGATTTACATTATTGAGAAAAGGAGGGAGTGAA-------GGAGAAAGACAGAAA---------------AGACAGAGAAAGAATGTGATGTGAGTACAATACCGACATTGAGACTTGAATCTGTAATGGTTTAGTATTGagaatggctctcacgttatcatattttatttcattaaatctgtgaatgtacctttcaggaaaaaagagccttcccaggaataaattaag-atctggcaacaaggatattatcctggattaaacaggttggtcttaaatgcaatcacaagtgtcca-tagaaga--gagagacagagagagacttaacacagattgtagaggagaagacaat-------------------ttggagtgatgtgtccacagccaaggaatcctgtaacctgccagagaatttagaaggtagg--agaagactcccatagagtcCCTGGAAGACCC i tarSyr2.ABRT02443347v1 C 0 I 1360 a score=6387.000000 s hg38.chrUn_KI270749v1 76474 13 + 158759 agaactgatgact s gorGor5.CYUI01005671v1 23236 13 - 24701 agaactgatgact i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66996538 13 - 115148730 agaactgatgact i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34748252 13 + 96509753 agacctgacgact i macFas5.chr10 C 0 C 0 e tarSyr2.ABRT02443347v1 6551 1360 - 17224 I a score=17915.000000 s hg38.chrUn_KI270749v1 76487 29 + 158759 ccaagatcttagcccagtgaaactga---------tct s gorGor5.CYUI01005671v1 23249 29 - 24701 ccaagatcttagcccagtgaaactga---------tct i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66996551 38 - 115148730 ccaagatcttagcctagtgaaactgattctggacttct i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34748265 38 + 96509753 ccaagaccttataccagcgaaactgattctggacttct i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02443347v1 7911 38 - 17224 ccatggtcttagttcactgaatctgattcttaatttct i tarSyr2.ABRT02443347v1 I 1360 C 0 a score=2100.000000 s hg38.chrUn_KI270749v1 76516 1 + 158759 g s gorGor5.CYUI01005671v1 23278 1 - 24701 g i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66996589 1 - 115148730 g i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34748303 1 + 96509753 g i macFas5.chr10 C 0 C 0 s papAnu3.chr13 104617260 1 + 128036923 g i papAnu3.chr13 N 0 C 0 s nasLar1.chr10 30635213 1 - 86128551 g i nasLar1.chr10 N 0 C 0 s tarSyr2.ABRT02443347v1 7949 1 - 17224 g i tarSyr2.ABRT02443347v1 C 0 C 0 a score=8755.000000 s hg38.chrUn_KI270749v1 76517 5 + 158759 gactt s gorGor5.CYUI01005671v1 23279 5 - 24701 gactt i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66996590 5 - 115148730 gtctc i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34748304 5 + 96509753 gtctc i macFas5.chr10 C 0 C 0 s papAnu3.chr13 104617261 5 + 128036923 gtctc i papAnu3.chr13 C 0 C 0 s nasLar1.chr10 30635214 5 - 86128551 gtctc i nasLar1.chr10 C 0 C 0 s rhiRox1.KN299071v1 16534 5 + 199907 gtctc i rhiRox1.KN299071v1 N 0 C 0 s tarSyr2.ABRT02443347v1 7950 5 - 17224 gcctc i tarSyr2.ABRT02443347v1 C 0 C 0 a score=5164.000000 s hg38.chrUn_KI270749v1 76522 2 + 158759 ca s gorGor5.CYUI01005671v1 23284 2 - 24701 ct i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66996595 2 - 115148730 ca i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34748309 2 + 96509753 ca i macFas5.chr10 C 0 C 0 s papAnu3.chr13 104617266 2 + 128036923 ca i papAnu3.chr13 C 0 N 0 s nasLar1.chr10 30635219 2 - 86128551 ca i nasLar1.chr10 C 0 N 0 s rhiRox1.KN299071v1 16539 2 + 199907 ca i rhiRox1.KN299071v1 C 0 C 0 s rhiBie1.NW_016814605v1 124356 2 - 254590 ca i rhiBie1.NW_016814605v1 N 0 I 99320 s tarSyr2.ABRT02443347v1 7955 2 - 17224 ca i tarSyr2.ABRT02443347v1 C 0 C 0 a score=1500.000000 s hg38.chrUn_KI270749v1 76524 1 + 158759 g s gorGor5.CYUI01005671v1 23286 1 - 24701 g i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66996597 1 - 115148730 g i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34748311 1 + 96509753 g i macFas5.chr10 C 0 C 0 s rhiRox1.KN299071v1 16541 1 + 199907 g i rhiRox1.KN299071v1 C 0 N 0 s tarSyr2.ABRT02443347v1 7957 1 - 17224 g i tarSyr2.ABRT02443347v1 C 0 C 0 e rhiBie1.NW_016814605v1 124358 99320 - 254590 I a score=192382.000000 s hg38.chrUn_KI270749v1 76525 288 + 158759 aactatgagagattccattcctgctgtttgaagctaccacatttttgagaacttgttacagtagcccgaggacactaacacaAATGGGGCTCCGGGAAAATCCAGACTAAAGGTGTTGTGTTGGTTTGCAATCTCCTTGCTTAACTTTC-----------------TGATACTAGACATAAATAGATTGGTGAAAAATTTTGTGATT---GAAGAAATG-TACATGCAACCTACAGTGTACAGAGAAGCATCTGTTAGTTATAAGATAAATATTGAT-AATTTTAGTTGAAAATGACATATGACTGTCAA s gorGor5.CYUI01005671v1 23287 288 - 24701 aactatgagagattccattcctgttgtttgaagctaccacatttttgagaacttgttacagtagcccgaggacactaacacaAATGGGGCTCCGGGAAAATCCAGACTAAAGGTGTTGTGTTGGTTTGCAATCTCCTTGCTTAACTTTC-----------------TGATACTAGACATAAATAGATTGGTGAAAAATTTTGTGGTT---GAAGAAATG-TACATGAAACCTACAGTGTACAGAGAAGCATCTGTTAGTTATAAGATAAATATTGAT-AATTTTAGTCGAAAATGACATATGACTGTCAA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66996598 305 - 115148730 aactatgagagattccattcctgttgtttgaagctgctacgtttttgagaacttgttacagtagcccgaagacactaacacaAATGGGGCTCCGGGAAAATCCAGACTAAATGTGCTGTGTTGGTTTGCAATCTCTTTGCTTAAGTTTCTGCTTAACTTTTCTCTTTGCTATTTCTTAACAATAGATTGGTGAAAAATTTTGTGATT---GAAGAAATG-TACATGAAACTTGCAGTGTACAGAGAAGCATCTGTTAGTTATAAGATAAATATTGAT-AATTTTAGTTGAAAATGACATATGACTGTTAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34748312 288 + 96509753 aactatgagtgattccattcctgttgcttgaagctaccacattgttgagaacttgttacagtagcccgaggacactaacacaAATGGGGCTCCAGGAAAATCCAGACGAAAGGTGCTGTGTTGGTTTGCAATCTCCTTGCTTAACTTTC-----------------TGATATTAGACATAAATAGATTGGTGAAAAATTTTGTGATT---GAAGAAATG-CACATGAAACCTACAGCGTACAGAGAGGCAACTCTTAGTTGTAAGATAAATATTGAT-AATTTTAGATGAAAATGACATATGACTGGTaa i macFas5.chr10 C 0 I 971 s tarSyr2.ABRT02443347v1 7958 292 - 17224 aactgtgagagaatacatttctgttgttttaaactggcacatttctggaagtttgtcatagtagcccaaagaCAATTATGCAAACAGGGCTGAGGGAAAA-CCAGACTAAATGTGTGATGATCAGTTGTAATCTCCACATTCACCTGTC-----------------TAATGCTACACATAAATTAATTGGTGACAAATTTTTTGGTTTAGAAAAAAATACTGCATGAATCCCACAGTGTTTAGAGAGGCATCCATTACTTGTAGAATCAATACTGATAAATTTTAGTTAAAGATAACATCTGTCTAGTAA i tarSyr2.ABRT02443347v1 C 0 C 0 e rhiBie1.NW_016814605v1 124358 99320 - 254590 I a score=25143.000000 s hg38.chrUn_KI270749v1 76813 43 + 158759 TATCTCACATAAC------ATTCTGAGTTACTCAAGAATGCATAAAAGG s gorGor5.CYUI01005671v1 23575 43 - 24701 TATCTCACATAAC------ATTCTGAGTTACTCAAGAATGCACAAAAGG i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66996903 43 - 115148730 TATCTCACACAAC------ATTCTGAGTTACTCAAGAATTCATAAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34749571 43 + 96509753 TATCTCACATAAC------ATTCTGAGTTACTCAAGGATGCATAAAAGG i macFas5.chr10 I 971 C 0 s tarSyr2.ABRT02443347v1 8250 49 - 17224 TATATTTTACAACATATTTATTCTAAGATATTTAGTGGAGTAAAAAGAG i tarSyr2.ABRT02443347v1 C 0 C 0 e rhiBie1.NW_016814605v1 124358 99320 - 254590 I a score=1500.000000 s hg38.chrUn_KI270749v1 76856 1 + 158759 G s gorGor5.CYUI01005671v1 23618 1 - 24701 G i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66996946 1 - 115148730 G i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34749614 1 + 96509753 G i macFas5.chr10 C 0 C 0 s rhiBie1.NW_016814605v1 223678 1 - 254590 G i rhiBie1.NW_016814605v1 I 99320 C 0 s tarSyr2.ABRT02443347v1 8299 1 - 17224 G i tarSyr2.ABRT02443347v1 C 0 N 0 a score=110216.000000 s hg38.chrUn_KI270749v1 76857 133 + 158759 GCACTAGATACTCTTCTCATGTATGTGTGTGTGTCTGTCTATACATGTATGTACACTTCATGGTGCATCAGCTGGCGGAATCCTCAGGACACCCCTTCACATCCTCAGTGccccgtttcacacatgaggaaac s gorGor5.CYUI01005671v1 23619 133 - 24701 GCACTAGATACTCTTCTCATGTATGTGTGTGTGTCTGTCTATACATGTATGTACACTTCATGGTGCATCAGCTGGCGGAACCCTCAGGACACCCCTTCACATCCTCAGTGccccatttcacacatgaggaaac i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66996947 131 - 115148730 GCACTAGATACTCTTCTCATG--TGTATGTGTGTCTGTCTATACATGTATGTACACTTCATGGTGCATCAGCTGGCGGAACCATCAGGACACCCCTTCACATCCTCAGTGTcccatttcacacgtgaggaaac i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34749615 130 + 96509753 GCATTAGATACTCCTCGTGTG--TGTATGTGTGTCTGTCTCTACATGTATGTTCACTTCATGGTGTGTCAGCTGGTGGAACCCTCAGGAC-CCCTTTCATACCCTCAGTGccccattacacacaggaggaaac i macFas5.chr10 C 0 C 0 s rhiBie1.NW_016814605v1 223679 127 - 254590 GCACTAGATACTCTTCTCATG--TGTA----TGTCTGTCTACACATGTATGTTCACTTCATGGtgcatcagctcgtggaaccctcagtacaccccttcatatcctcaatgccccatttcacacatgaggcaac i rhiBie1.NW_016814605v1 C 0 N 0 s tarSyr2.KE939642v1 106403 105 + 636003 CCACTGGATACTCTTC-----------------TCTAACAAAAAATGT---TACAATTCATGGTACATCATGAGGTTATACCCAGAGAGCTCCCCTTGAtatttgca--------tttcacagatgaggaaac i tarSyr2.KE939642v1 N 0 C 0 a score=83771.000000 s hg38.chrUn_KI270749v1 76990 122 + 158759 tgttcat--gacagcacatggctgatttgcataaaagtcacttggtcagcagttgttgaagctgaacttggaatctaggtctgtctgaccttaactatgttccttccacagagccacattCATT s gorGor5.CYUI01005671v1 23752 122 - 24701 tgttcat--gacagcacatggctgatttacataaaagtcacttggtcagcagttgttgaagctgaacttggaatctaggtctgtctgaccttaactatgttccttccacagagccacgttCATT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66997078 122 - 115148730 tgttcat--gagagcacatggctaatttgcataaaagtcacttggtcagcagttgttgaagctgaacttggaatctacgtctgtctgaccttaactatgttccttccacagagccacattCATT i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34749745 122 + 96509753 tgttcat--gagagcacatggctgatttgcataaaagtcacttggtcagcagttgttgaagctgaacttggaatctaggtctgtctgaccacaactatgttccttccacagagccacattCATT i macFas5.chr10 C 0 C 0 s tarSyr2.KE939642v1 106508 120 + 636003 tgttcatcaggcagcacaag--tgatctt--tcaaagtcacaccatcagtgagtattagagctggattttggacctaggtctgtctgcccttaactatcttcctttcaTGTGGCCACTTTTACC i tarSyr2.KE939642v1 C 0 N 0 a score=306905.000000 s hg38.chrUn_KI270749v1 77112 637 + 158759 CCATAGAGGAACCCACCACCTATAAAACCAGGAAAGAGACAAAGCCAGAAGTGCAGGGTGGATTTCTTAACACAAGCTCACTGCGACCTCTAGTCCTCATCACGCTGACACTAAGCTTAAACCCAGACCCTTCTACAGTTTTGTCTACAAAGCACAATTTGCCCAAAGCCTTTACAAACACCAACAGCCTTTCTTTCAGATATGGCAGCAGGGTCACATCTTACACGGCCCTGACCACATTTTGTCTCCTCTGCCATCCCCATCTCTCTGACTCAGTCCTCGCTtgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcacaaggacaaaaaaaccagtcactgcatgttctcactcacaggtgggaattgaacaatgagaacacatggacagaggaaggggaacatcacacaccagggcctgtcatggggtggggtgaggggggagggatagcattaggaggtatacctaatgtaaatgacgagttaatgggtgcagcacaccaacatggcacatgtatacgtatgtaacaaaactgcacgttgtgcacatgtaccctagaacttaaagaacaataataaTAATAAT-AAA s gorGor5.CYUI01005671v1 23874 638 - 24701 CCATAGAGGAACCCACCACCTATAAAACCAGAAAAGAGACAAAGCCAGAAGTGCAGGGTGGATTTCTTAACACAAGCTCACTGCGACGTCTAGTCCTCATCACGCTGACACTAAGCTTAAAGCCAGACCCTTCTACAGTTTTGTCTACAAAGCACAATTTGCCCAAAGCCTTTACAAACACCAACAGCCTTTCTTTCAGATATGGCAGCAGGGTCACATCTTACACGGCCCTGACCACATTTTGTCTCCTCTGCCATCCCCATCTCTCTGACTCAGTCCTCGCTtgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaaccaatcactgcatgttctcactcacaggtgggaattgaacaatgagaacacatggacacaggaaggggaacatcacacaccagggcctgtcgtggggtggggggagggggcagggatagcattaggaggtacacctaatgtaaatgacgagttaatgggtgcagcacaccaacatgacacatgtatacatatgtaacaaacctgcaccttgagcacatgtaccctagaacttaaagaacaataataaTAATAATAAAA i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66997200 632 - 115148730 CCATAGAGGAACCCACCACCTATAAAACCAGAAAAGAGACAAAGCCAGAAGTGCAGGGTGGATTTCTTAACACAAGCTCACTGCAACCTCTAGTCCTCATCATGCTGACACTAAGCTTAAACCCAGACCCTTCTACAATTTTGTCTACAAAGCACAATTTGCTCAAAGCCTTTACAAACACCAAGAACCTTTCTTTCAGATGTGGCAGCAGGGTCACATCTTACATGGCCCTGACCACATTTTGTCTCCTCTGCCATTCCCATCTCTCTGACTCAGTCCTCGCTtgcagccataaaaaaggatgtgttcatgtcctttgtagggacatggatgaagctggaaaccatcattctctgtaaactattgcaaggac-aaaaaaccagtcactgcatgttctcactcatagttgggaattgaacgatgagaacacttggacacaggaaggggaacatcacacaccagggcctgtcgtggggtggggggaggggagacggatagctttaggaggtatacctaatgtaaatgatgagttaatgggtgcagcacacctacatggcacatgtatacatatgtaacaaacctgcacgttgtgcacatgtatcctagaacttaaagaacaataatagtaat-----aa i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34749867 628 + 96509753 CCATGGAGGAACCCACCGCCTATAAAACCAGAGAAGAGACAAAGCCAGAAATGCATGGTGGAGTTCTTAACACAAGCTCACTGCGAATTCTAGTTCCCATCACGCTGACACTAAGCTTGAACCCAGACCCTTCTACAGTTTGGTCTACAAAGCACAACTTGCTCAAAGCCTTTAAAAACACCAAGAACCTTTCCTTCAGATATGGCAGCAGAGTCACATCTTGCATGGCCCTGACCACATTTAGTCTCCTCTGCCACCCCCATCTCTCTGACTCAGTCCTTGCTtgcagccataaaaaagggtgagttcatgtcctttcttgggacatggatgaagctgaaatccatcattctcagcaaactatcgcaagaac-aaaaatccaaaaaccacatgttctcactcataggtgggaattgaacagtggaaacacttggacacaaggtggggaa-atcacacaccggggcctgttgtggggtagggagaggaggtagggatagcattaggagatatacctaatgtaaatgacaagttaatgggtaccgcacaccaacatggcacatgtatacatatgtaacaaacatgcacattgtgcacatgcaccctagaacttaaagcata--------tataaaaaaa i macFas5.chr10 C 0 C 0 a score=55019.000000 s hg38.chrUn_KI270749v1 77749 100 + 158759 AGAATGAGTCTTGTACATCTAATTTGCCCTACAAATGTTAAAACAGCAAACCCGCATCCCCTTCCTCTTCTCATGTGCTGTGAGGGATGACCTCCAGGCT s gorGor5.CYUI01005671v1 24512 97 - 24701 AGAATGGGTCTTGTACATCTAATTTGCCCTACAAATGTTAAAACAGCAAACCCGCATCCCCTTCCTCTT---ATGTGCTGTGAGGGATGACCTCCAGGCT i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 66997832 100 - 115148730 aaaaTGGGTCATGTACATCTAATTTGCCCTACGAATGTTAAAACAGCAAACCCGCATCCCCCTCCTCTTCTCATGTGCTGTGGGAGCTGACCTCCAGGCT i nomLeu3.chr7b C 0 C 0 s macFas5.chr10 34750495 100 + 96509753 TGATTGGGTCTTGTACATCTAATTTTCCCTATGAATGTTAAAACAACAAACCTACAGCCCTCTCCTCTGCTCATGTGCTGTGAGAGATGACTTCCAGGCT i macFas5.chr10 C 0 C 0 s tarSyr2.ABRT02220930v1 3462 84 - 4434 AGATTGTGTCTTACAAATCTATTTTGCCCTCCTATTATGAAA---------------TCCCATATTCTTCTCA-GTGTTGTGAGAGCTGACTCTGAAGCT i tarSyr2.ABRT02220930v1 N 0 C 0 a score=9035.000000 s hg38.chrUn_KI270749v1 77849 8 + 158759 CTCAGATA s gorGor5.CYUI01005671v1 24609 8 - 24701 CTCAGATA i gorGor5.CYUI01005671v1 C 0 N 0 s nomLeu3.chr7b 66997932 8 - 115148730 CTCAGATA i nomLeu3.chr7b C 0 N 0 s macFas5.chr10 34750595 8 + 96509753 CCCAGATA i macFas5.chr10 C 0 N 0 s tarSyr2.ABRT02220930v1 3546 8 - 4434 CTCAGACA i tarSyr2.ABRT02220930v1 C 0 C 0 s dasNov3.JH563077 1751783 8 - 2187301 CTCAGTTA i dasNov3.JH563077 N 0 C 0 a score=-1990.000000 s hg38.chrUn_KI270749v1 77857 9 + 158759 TTTCTGAGA----- s tarSyr2.ABRT02220930v1 3554 6 - 4434 T---CAAGA----- i tarSyr2.ABRT02220930v1 C 0 C 0 s dasNov3.JH563077 1751791 9 - 2187301 -----TATACATCA i dasNov3.JH563077 C 0 C 0 a score=-468.000000 s hg38.chrUn_KI270749v1 77866 3 + 158759 TAT-- s saiBol1.JH378125 27694151 3 + 27742158 TAT-- i saiBol1.JH378125 N 0 C 0 s tarSyr2.ABRT02220930v1 3560 3 - 4434 TAT-- i tarSyr2.ABRT02220930v1 C 0 N 0 s dasNov3.JH563077 1751800 3 - 2187301 --TCC i dasNov3.JH563077 C 0 C 0 a score=-180.000000 s hg38.chrUn_KI270749v1 77869 5 + 158759 TTCTC- s saiBol1.JH378125 27694154 5 + 27742158 TCCTC- i saiBol1.JH378125 C 0 I 3 s dasNov3.JH563077 1751803 5 - 2187301 -CTTCA i dasNov3.JH563077 C 0 C 0 a score=22037.000000 s hg38.chrUn_KI270749v1 77874 2 + 158759 AG s panTro5.chr3 201966141 2 - 202621043 AG i panTro5.chr3 N 0 C 0 s panPan2.chr3 204734186 2 - 205426864 AG i panPan2.chr3 N 0 C 0 s nomLeu3.chr21 67552216 2 + 86207423 AG i nomLeu3.chr21 N 0 C 0 s rheMac8.chr2 66029016 2 + 204787373 AG i rheMac8.chr2 N 0 C 0 s macFas5.chr2 60960860 2 - 192460366 AG i macFas5.chr2 N 0 C 0 s macNem1.NW_012018021v1 11073227 2 - 17224310 AG i macNem1.NW_012018021v1 N 0 C 0 s cerAty1.NW_012009469v1 17385039 2 - 41321030 AG i cerAty1.NW_012009469v1 N 0 C 0 s chlSab2.chr22 64458646 2 - 101219884 AG i chlSab2.chr22 N 0 C 0 s manLeu1.NW_012098965v1 840897 2 - 924385 AG i manLeu1.NW_012098965v1 N 0 C 0 s colAng1.NW_012114711v1 6684152 2 - 10587913 AG i colAng1.NW_012114711v1 N 0 C 0 s calJac3.chr15 46008313 2 - 98464013 AG i calJac3.chr15 N 0 C 0 s saiBol1.JH378125 27694162 2 + 27742158 AG i saiBol1.JH378125 I 3 C 0 s aotNan1.NW_018502033v1 3688219 2 + 4093027 AG i aotNan1.NW_018502033v1 N 0 C 0 s otoGar3.GL873534 11022738 2 + 30473821 AG i otoGar3.GL873534 N 0 C 0 s canFam3.chr20 16569024 2 + 58134056 AA i canFam3.chr20 N 0 C 0 s dasNov3.JH563077 1751808 2 - 2187301 AA i dasNov3.JH563077 C 0 C 0 a score=668033.000000 s hg38.chrUn_KI270749v1 77876 68 + 158759 TTGCTATTCTCATGGGCCAGGAGAAAACATCTTTT---------GTGAGGCTAGCT--CTCTTAT-ATCCTCATACTCTC s panTro5.chr3 201966143 68 - 202621043 TTGCTATTCTCATGGGCCAGGAGAAAACATCTTTT---------GTGAGGCTAGCT--TTCTTAT-ATCCTCATACTCTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734188 68 - 205426864 TTGCTATTCTCATGGGCCAGGAGAAAACATCTTTT---------GTGAGGCTAGCT--CTCTTAT-ATCCTCATACTCTC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552218 68 + 86207423 TTGCTATTCTCGTGGGCCAAGAGAAAACATCTTTT---------GTGAGGCTAGCT--CTCTTAT-AACCTCATACTCAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029018 68 + 204787373 TTACTATTCTCAAGGGCCAGGAGAAAACATCTTTT---------GTGAGGCTAGCT--CTCTTGT-CTCCTCATATTCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60960862 68 - 192460366 TTACTATTCTCAAGGGCCAGGAGAAAACATCTTTT---------GTGAGGCTAGCT--CTCTTGT-CTCCTCATATTCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073229 68 - 17224310 TTACTATTCTCAAGGGCCAGGAGAAAACATCTTTT---------GTGAGGCTAGCT--CTCTTGT-CTCCTCATATTCTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385041 68 - 41321030 TTGCTATTCTCAAGGGCCAGGAGAAAACATCTTTT---------GTGAGGCTAGCT--CTCTTGT-CTCCTCATATTCTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64458648 68 - 101219884 TTGCTATTCTCAAGGGCCAGGAGAAAACATCTTTT---------GTGAGGCTAGCT--CTCTTGT-CCCCTCATATTCTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 840899 68 - 924385 TTGCTATTCTCAAGGGCCAGGAGAAAACATCTTTT---------GTGAGGCTAGCT--CTCTTGT-CTCCTCATATTCTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684154 68 - 10587913 TTGCTATTCTCAAGGGCCAGGAGAAAACATCTTTT---------GTGAGGCTAGCT--CTCTTAT-CTCCTCATATTCTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008315 70 - 98464013 TTGCTATTCTCATGGGCCAGGAGAAAACATCTTTT---------GTGATGCTAGCTCTCTCTTAC-CTCTTTATATTCTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694164 70 + 27742158 TTGCTATTCTCATGGGCCAAGAGAAAACATCTTTT---------GTGATGCTAGCTTTCTCTTAC-CTCTTCGTATTCTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 231575 70 - 4835464 TTGCTATTCTCATGGGCCAGGAGAAAACATCTTTT---------CTGATGCTAGCTCCCTCTTAC-CTCTTCATATTCTC i cebCap1.NW_016107467v1 N 0 C 0 s aotNan1.NW_018502033v1 3688221 70 + 4093027 TTGCTATACTCATGGGCCAGGAGAAAACATCTTTT---------GTGATGCTAGCTCTCTCTTAC-CTCTTCATATTCTG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11022740 60 + 30473821 TGACTATTCCTCTGGGCC--------ACACTTTCT---------GTGATACTGACT--CTTTCAT-CGGCTCATACTCTA i otoGar3.GL873534 C 0 I 3 s canFam3.chr20 16569026 77 + 58134056 TAGCAATCCCCGTGGATCAACAGAACACTTTTTTTTTTTTTCTGGTGGGTTAAACT--ATTTTAT-GCTCTCATAATTTC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1751810 69 - 2187301 TGGCTATCCCCATGGGCCAGCAGAAAACATTTTTT---------ATTGGATCAGCT--CTCTTATGCCTCCCATATTCTC i dasNov3.JH563077 C 0 C 0 a score=39772.000000 s hg38.chrUn_KI270749v1 77944 3 + 158759 TCC s panTro5.chr3 201966211 3 - 202621043 TCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734256 3 - 205426864 TCC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552286 3 + 86207423 TCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029086 3 + 204787373 TCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60960930 3 - 192460366 TCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073297 3 - 17224310 TCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385109 3 - 41321030 TCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64458716 3 - 101219884 TCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 840967 3 - 924385 TCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684222 3 - 10587913 TCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008385 3 - 98464013 TCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694234 3 + 27742158 TCT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 231645 3 - 4835464 TCT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3688291 3 + 4093027 TCT i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 120224 3 + 958716 TCT i tarSyr2.KE939134v1 N 0 I 945 s otoGar3.GL873534 11022803 3 + 30473821 TCC i otoGar3.GL873534 I 3 C 0 s canFam3.chr20 16569103 3 + 58134056 TCC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1751879 3 - 2187301 TCT i dasNov3.JH563077 C 0 I 3 a score=98145.000000 s hg38.chrUn_KI270749v1 77947 11 + 158759 CCCACACAGCA s panTro5.chr3 201966214 11 - 202621043 CCCACATAGCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734259 11 - 205426864 CCCACATAGCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552289 11 + 86207423 CCCACATAGCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029089 11 + 204787373 CCCACATAGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60960933 11 - 192460366 CCCACATAGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073300 11 - 17224310 CCCACATAGGA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385112 11 - 41321030 GCCACATAGGA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64458719 11 - 101219884 CCCACATAGCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 840970 11 - 924385 CCCACATAGGA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684225 11 - 10587913 CCCACGTAGCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008388 11 - 98464013 CCCACATAGCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694237 11 + 27742158 CCCACATAGCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 231648 10 - 4835464 CCCACATAG-A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3688294 11 + 4093027 CCCACATAGCA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11022806 11 + 30473821 CCAACAGAGTA i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1751885 11 - 2187301 CCCACAGAATC i dasNov3.JH563077 I 3 C 0 e tarSyr2.KE939134v1 120227 945 + 958716 I e canFam3.chr20 16569106 0 + 58134056 C a score=13923.000000 s hg38.chrUn_KI270749v1 77958 1 + 158759 T s panTro5.chr3 201966225 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734270 1 - 205426864 T i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69623481 1 + 202140232 T i ponAbe2.chr3 N 0 I 191 s nomLeu3.chr21 67552300 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029100 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60960944 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073311 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385123 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64458730 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 840981 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46008399 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694248 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 231658 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3688305 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11022817 1 + 30473821 T i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16569106 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1751896 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 120227 945 + 958716 I e colAng1.NW_012114711v1 6684236 0 - 10587913 C a score=1367520.000000 s hg38.chrUn_KI270749v1 77959 127 + 158759 TTTGT----TTCTTTGTAAT-CC-TTTGCTGCTCCTGAGCTACAGGATCTAGAAAATAATTGGAAATTTAACAGTGAAATTAATTTCTTGCTAGCATTTGCCTTTATGAG--ACTGAAACAGTGTGTGCTTTCAT s panTro5.chr3 201966226 127 - 202621043 TTTGT----TTCTGTGTAAT-CC-TTTGCTGCTCCTGAGCTACAGGATCTAGAAAATAATTGGAAATTTAACAGTGAAATTAATTTCTTGCTAGCATTTGCCTTTATTAG--ACTGAAACAGTGTGTGCTTTCAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734271 127 - 205426864 TTTGT----TTCTTTGTAAT-CC-TTTGCTGCTCCTGAGCTACAGGATCTAGAAAATAATTGGAAATTTAACAGTGAAATTAATTTCTTGCTAGCATTTGCCTTTATTAG--ACTGAAACAGTGTGTGCTTTCAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552301 129 + 86207423 TTTGT----TTCTTTGTAAT-CC-TTTGCTGCTCCTGAGCTACAGGATCTAGAAAATAATTGGAAATTTAACAGTGAGATTAATTTCTTGCTAGCATTTGCCTTTATTAGAAACTGAAACAGTGTGTGCTTTCAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029101 127 + 204787373 TTTGT----TTCTTTGTAAC-CC-TTTGCTGCTCCTGAGCTAGAGGATCTAGAAAATAATTGGAAATTTAACAGTGAGGTTAATTTTTTGCTACCATTTGCCTTTATTAG--ACTGAAAGAGTGTGTGCTTTCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60960945 127 - 192460366 TTTGT----TTCTTTGTAAC-CC-TTTGCTGCTCCTGAGCTAGAGGATCTAGAAAATAATTGGAAATTTAACAGTGAGGTTAATTTTTTGCTACCATTTGCCTTTATTAG--ACTGAAAGAGTGTGTGCTTTCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073312 127 - 17224310 TTTGT----TTCTTTGTAAC-CC-TTTGCTGCTCCTGAGCTAGAGGATCTAGAAAATAATTGGAAATTTAACAGTGAGGTTAATTTTTTGCTACCATTTGCCTTTATTAG--ACTGAAAGAGTGTGTGCTTTCAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385124 127 - 41321030 TTTGT----TTCTTTGTAAC-CC-TTTGCTGCTCCTGAGCTAGAGGATCTAGAAAATAATTGGAAATTTAACAGTGAGGTTAATTTTTTGCTACCATTTGCCTTTATTAG--ACTGAAAGAGTGTGTGCTTTCAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64458731 127 - 101219884 TTTGT----TTCTTTGTAAC-CC-TTTGCTGCTCCTGAGCTAGAGGATCTAGCAAATAATTGGAAATTTAACAGTGAGGTTAATTTTTTGCTACCATTTGCCTTTATTAG--ACTGAAAGAGTGTGTGCTTTCAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 840982 127 - 924385 TTTGT----TTCTTTGTAAC-CC-TTTGCTGCTCCTGAGCTAGAGGATCTAGAAAATAATTGGAAATTTAACAGTGAGGTTAATTTTTTGCTACCATTTGCCTTTATTTG--ACTGAAAGAGTGTGTGCTTTCAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684236 127 - 10587913 TTTGT----TTCTTTGTAAC-CC-TTTGCTGCTCCTGAGCTAGAGGATCTACAAATTAATTGGAAATTTAACAGTGAGATTAATTTTTTGCTAGCATTTGCCTTTATTAG--ACTGAAAGAGTGTGTGCTTTCAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008400 127 - 98464013 TTTGT----TTCTTTGTAAC-CC-TTTGTTGTTCTTGAACTATAGGATCTAGAGAATAATTGGAATTTTAGTAGTGAGGTTAATTTCTTGCTAGCATTTGCCTTTATTAG--ACTGAAGAAGTGTGTGCTTTCAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694249 127 + 27742158 TTTGT----TTCTTTGTAAT-CC-TTTGTTGCTCTTGAGCTACGGGATCTAGAAAATAATTGGAATTTTAATAGTGAGATTAATTTCTTGCTAGCATTTGCCTTTATTAG--ACTGAAAAAGTGTGTGCTTTCAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 231659 126 - 4835464 TTTGT----TTCTTTGTAAC-AC-TTTGTTGCTCTTGAGCTATAGGATCTAGAAAAT-ACTGGAATTTTAATAATGAGATTAATTTCTTGCTAGCATTTGCCTTTATTGG--ACTGAAAAAGTGTGTGCTTTCAT i cebCap1.NW_016107467v1 C 0 I 296 s aotNan1.NW_018502033v1 3688306 127 + 4093027 TTTGT----TTCTTTGTAAC-CT-TTTGTTGCTCTTGAGCTACAGGATCTATAAAATAATTGGAATTTTAATAGTGAGATTAATTTCTTGCTAGCATTTGCCTTTATTAG--ACTGAAAAAGTGTGTGCTTTCAT i aotNan1.NW_018502033v1 C 0 I 201 s otoGar3.GL873534 11022819 128 + 30473821 TTTTT----TTCTTTTTAAT-CCTTTTACTGCTCTTAGATTAAAGGATCTAAAACATGATTGGGCTTTTAATATTGAGATTAACTTCTCATTAGCATTTGTCTTTCCTGG--ACTGACAGAGAATCTGTTTTCAT i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16569107 116 + 58134056 TCTGTAGAATTCTTTGTATCTCC-GTAGCTCCTCTCATGTTGAAAATTCTAAAAGATAATTGGACTTTTAATATTGAAATTAAATTTTTGCTA----------------G--CATGAAAGAGTGTCTGCTTTTAC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1751897 127 - 2187301 TTTGT----TTCTTTGTAAT-TC-CTTTTTGCCCTCGGGTTGGATTATTTAAAAGGTAAGTGGACCTTTAATATTGAAATTAACTTCCTGCCAGCATTTGTCCTTATTAG--ACTGAAAAAGTATCTGTTATCAT i dasNov3.JH563077 C 0 C 0 e ponAbe2.chr3 69623482 191 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I a score=21559.000000 s hg38.chrUn_KI270749v1 78086 3 + 158759 ATG- s panTro5.chr3 201966353 3 - 202621043 CTG- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734398 3 - 205426864 CTG- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552430 3 + 86207423 CTG- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029228 3 + 204787373 CTG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961072 3 - 192460366 CTG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073439 3 - 17224310 CTG- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385251 3 - 41321030 CTG- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64458858 3 - 101219884 CTG- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841109 3 - 924385 CTG- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684363 3 - 10587913 CTG- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008527 3 - 98464013 CTG- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694376 3 + 27742158 CTG- i saiBol1.JH378125 C 0 C 0 s otoGar3.GL873534 11022947 3 + 30473821 CTG- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569223 3 + 58134056 CTG- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752024 3 - 2187301 -TAG i dasNov3.JH563077 C 0 C 0 e ponAbe2.chr3 69623482 191 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I a score=-547.000000 s hg38.chrUn_KI270749v1 78089 2 + 158759 A-T s panTro5.chr3 201966356 2 - 202621043 A-T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734401 2 - 205426864 A-T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552433 2 + 86207423 A-T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029231 2 + 204787373 A-T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961075 2 - 192460366 A-T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073442 2 - 17224310 A-T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385254 2 - 41321030 A-T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64458861 2 - 101219884 A-T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841112 2 - 924385 A-T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684366 2 - 10587913 A-T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008530 1 - 98464013 A-- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694379 2 + 27742158 AA- i saiBol1.JH378125 C 0 I 3 s canFam3.chr20 16569226 2 + 58134056 A-T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752027 2 - 2187301 A-T i dasNov3.JH563077 C 0 C 0 e ponAbe2.chr3 69623482 191 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I a score=37383.000000 s hg38.chrUn_KI270749v1 78091 8 + 158759 --TGCAATAC s panTro5.chr3 201966358 8 - 202621043 --TGCAATAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734403 8 - 205426864 --TGCAATAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552435 8 + 86207423 --TGCAATAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029233 8 + 204787373 --TGCAATAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961077 8 - 192460366 --TGCAATAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073444 8 - 17224310 --TGCAATAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385256 8 - 41321030 --TGCAATAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64458863 8 - 101219884 --TGCAATAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841114 8 - 924385 --tgcaatac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684368 8 - 10587913 --TGCAATAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008531 5 - 98464013 -----AAAGC i calJac3.chr15 C 0 C 0 s canFam3.chr20 16569228 8 + 58134056 --TGCAAGAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752029 8 - 2187301 TGTATAAT-- i dasNov3.JH563077 C 0 C 0 e ponAbe2.chr3 69623482 191 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e saiBol1.JH378125 27694381 3 + 27742158 I a score=21996.000000 s hg38.chrUn_KI270749v1 78099 3 + 158759 ATG s panTro5.chr3 201966366 3 - 202621043 ATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734411 3 - 205426864 ATG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552443 3 + 86207423 ATG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029241 3 + 204787373 ATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961085 3 - 192460366 ATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073452 3 - 17224310 ATG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385264 3 - 41321030 ATG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64458871 3 - 101219884 ATG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841122 3 - 924385 atg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684376 3 - 10587913 ATG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008536 3 - 98464013 ATG i calJac3.chr15 C 0 C 0 s dasNov3.JH563077 1752037 3 - 2187301 ATG i dasNov3.JH563077 C 0 I 22 e ponAbe2.chr3 69623482 191 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e saiBol1.JH378125 27694381 3 + 27742158 I a score=103837.000000 s hg38.chrUn_KI270749v1 78102 24 + 158759 CACGTATGTGTATGTATACAATAC s panTro5.chr3 201966369 24 - 202621043 CACGTATGTGTATGTATACAATAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734414 24 - 205426864 CACGtatgtgtatgtatataatac i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552446 24 + 86207423 CACatatgtgtatgtatacaatac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029244 24 + 204787373 CATGTACGGgtatgtatacaatac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961088 24 - 192460366 CATGTACGGGtatgtatacaatac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073455 24 - 17224310 CATGTACGGGtatgtatacaatac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385267 24 - 41321030 CATGTACGGGtatgtatacaatac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64458874 24 - 101219884 CACATACGGGtatgtatacaatac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841125 24 - 924385 catgcacgggtatgtatacaatac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684379 24 - 10587913 CACGTATGGCTATGTATACAATAC i colAng1.NW_012114711v1 C 0 I 176 e ponAbe2.chr3 69623482 191 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C a score=4095.000000 s hg38.chrUn_KI270749v1 78126 1 + 158759 A s panTro5.chr3 201966393 1 - 202621043 A i panTro5.chr3 C 0 T 21 s panPan2.chr3 204734438 1 - 205426864 a i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552470 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029268 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961112 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073479 1 - 17224310 a i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385291 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64458898 1 - 101219884 a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841149 1 - 924385 a i manLeu1.NW_012098965v1 C 0 C 0 e ponAbe2.chr3 69623482 191 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I a score=3276.000000 s hg38.chrUn_KI270749v1 78127 1 + 158759 T s panPan2.chr3 204734439 1 - 205426864 t i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552471 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66029269 1 + 204787373 t i rheMac8.chr2 C 0 I 178 s macFas5.chr2 60961113 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073480 1 - 17224310 t i macNem1.NW_012018021v1 C 0 I 178 s cerAty1.NW_012009469v1 17385292 1 - 41321030 t i cerAty1.NW_012009469v1 C 0 I 230 s chlSab2.chr22 64458899 1 - 101219884 t i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841150 1 - 924385 t i manLeu1.NW_012098965v1 C 0 I 178 e ponAbe2.chr3 69623482 191 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e panTro5.chr3 201966394 21 - 202621043 T a score=4833.000000 s hg38.chrUn_KI270749v1 78128 7 + 158759 ACACATA s panPan2.chr3 204734440 7 - 205426864 gcacata i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552472 7 + 86207423 acacata i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60961114 7 - 192460366 gcatgta i macFas5.chr2 C 0 C 0 s chlSab2.chr22 64458900 7 - 101219884 gcacata i chlSab2.chr22 C 0 I 202 e ponAbe2.chr3 69623482 191 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e panTro5.chr3 201966394 21 - 202621043 T a score=-1720.000000 s hg38.chrUn_KI270749v1 78135 5 + 158759 ----CAACA s panPan2.chr3 204734447 4 - 205426864 ----taac- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552479 5 + 86207423 ----taaga i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60961121 6 - 192460366 caggta--- i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 69623482 191 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e panTro5.chr3 201966394 21 - 202621043 T a score=5251.000000 s hg38.chrUn_KI270749v1 78140 9 + 158759 TATATGTAT s panTro5.chr3 201966373 9 - 202621043 TATGTGTAT i panTro5.chr3 T 21 C 0 s panPan2.chr3 204734451 6 - 205426864 ---gtgtat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552484 9 + 86207423 tatatgtat i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60961127 9 - 192460366 tgtatgcat i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 69623482 191 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I a score=1500.000000 s hg38.chrUn_KI270749v1 78149 1 + 158759 G s panTro5.chr3 201966382 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734457 1 - 205426864 g i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69623673 1 + 202140232 g i ponAbe2.chr3 I 191 C 0 s nomLeu3.chr21 67552493 1 + 86207423 g i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60961136 1 - 192460366 g i macFas5.chr2 C 0 C 0 e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I a score=1320.000000 s hg38.chrUn_KI270749v1 78150 4 + 158759 TATA------ s panTro5.chr3 201966383 4 - 202621043 TATA------ i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734458 4 - 205426864 tata------ i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69623674 4 + 202140232 tata------ i ponAbe2.chr3 C 0 I 748 s nomLeu3.chr21 67552494 10 + 86207423 tatacatgca i nomLeu3.chr21 C 0 C 0 e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C a score=33270.000000 s hg38.chrUn_KI270749v1 78154 133 + 158759 GAATACGTACACATACAACATATGTATGTATAGAATACGTACA------CATACA-AC--ATATGTATGTA-----TAGAATACGTACACATACA-ACATATGTATGTA-TAGAATACGTACACATACAAC----ATGTATGTATAGAATACG s panTro5.chr3 201966387 137 - 202621043 CAATACATGCACATATAACATATGTATGTATACAATACATGCA------CATATA-AC--ATATGTATGTA-----TACAATACATGCACATATA-ACATATGTATGTA-TACAATACATGCACATATAACATATATGTATGTATACAATACA i panTro5.chr3 C 0 T 130 s panPan2.chr3 204734462 133 - 205426864 caatacatgcacatataac--atgtatgtatacaatacatgca------catata-acatatatgtatgta-----tacaatacatgcacatata-acata--tatgtg-tgcaatacatgcacatataac--atatgtatgtgtgcaataca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552504 135 + 86207423 taatatgtacatat-------atatgtatatacaatatataaattgcattatacatac--atatgtatataaaagttgcaatgtacacacatatgtatatatgtatgtattgcaatatacatatatattac---------tatattttatata i nomLeu3.chr21 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C a score=9505.000000 s hg38.chrUn_KI270749v1 78287 33 + 158759 TACACATACAAC--ATATGTATGTATAGAATACGT s panTro5.chr3 201966394 33 - 202621043 TGCACATATAAC--ATATGTATGTATACAATACAT i panTro5.chr3 T 130 C 0 s panPan2.chr3 204734595 35 - 205426864 cggacatataacatatatgtatgtatacaatacat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552639 31 + 86207423 tacatataaaac---tatgtatatatG-AAtatat i nomLeu3.chr21 C 0 I 125 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C a score=12937.000000 s hg38.chrUn_KI270749v1 78320 58 + 158759 ACACATACAAC--ATATGTATGTATAGAATACGTACACATATAAC--ATATGTATGTATACA s panTro5.chr3 201966427 58 - 202621043 GCACATATAAC--ATATGTATGTATACAATACATGCACATATAAC--ATATGTATGTATACA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204734630 62 - 205426864 gcacatataacatatatgtatgtatacaatacatgcacatataacatatatgtatgtataca i panPan2.chr3 C 0 I 285 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I a score=91.000000 s hg38.chrUn_KI270749v1 78378 1 + 158759 A s panTro5.chr3 201966485 1 - 202621043 A i panTro5.chr3 C 0 I 128 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=3065.000000 s hg38.chrUn_KI270749v1 78379 43 + 158759 TACGTACACATATAAGATGTATGTATACAATACGTACACATAT s panTro5.chr3 201966614 43 - 202621043 TACATGCACATATAACATCTATGTATACAATACATGCACATAT i panTro5.chr3 I 128 T 158 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=3036.000000 s hg38.chrUn_KI270749v1 78422 56 + 158759 AAG--------ATGTATACAATACGTACACATATAAC------ATGTATACAATACGTACACATATAACA s panTro5.chr3 201966499 70 - 202621043 AACATATATGTATGTATACAATACATGCACATATAACATATGTATGTGTGCAATACATGCACATATAACA i panTro5.chr3 T 158 I 88 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=0.000000 s hg38.chrUn_KI270749v1 78478 28 + 158759 TATGTATACAAGACGTACACATATAACA e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939134v1 120227 945 + 958716 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966569 88 - 202621043 I a score=389.000000 s hg38.chrUn_KI270749v1 78506 5 + 158759 -TATAT s nasLar1.chr3 49239792 5 + 179790006 -tgcat i nasLar1.chr3 N 0 C 0 s tarSyr2.KE939343v1 589454 6 - 1178645 TAATAT i tarSyr2.KE939343v1 n 945 I 19 e ponAbe2.chr3 69623678 748 + 202140232 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966569 88 - 202621043 I a score=1268.000000 s hg38.chrUn_KI270749v1 78511 19 + 158759 GTATGTATACAATACGTAC s nasLar1.chr3 49239797 19 + 179790006 atatatatgcaatacaTAC i nasLar1.chr3 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939343v1 589460 19 - 1178645 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966569 88 - 202621043 I a score=856.000000 s hg38.chrUn_KI270749v1 78530 7 + 158759 ACATATA s nasLar1.chr3 49239816 7 + 179790006 ACACAAC i nasLar1.chr3 C 0 C 0 s tarSyr2.KE939343v1 589479 7 - 1178645 ACATATA i tarSyr2.KE939343v1 I 19 I 16 e ponAbe2.chr3 69623678 748 + 202140232 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966569 88 - 202621043 I a score=3182.000000 s hg38.chrUn_KI270749v1 78537 15 + 158759 ACATGTATGTATACA s panTro5.chr3 201966657 15 - 202621043 ATATGTATGTATACA i panTro5.chr3 I 88 T 186 s nasLar1.chr3 49239823 15 + 179790006 ATGTGTATATATGCA i nasLar1.chr3 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939343v1 589486 16 - 1178645 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=91.000000 s hg38.chrUn_KI270749v1 78552 1 + 158759 A s nasLar1.chr3 49239838 1 + 179790006 A i nasLar1.chr3 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939343v1 589486 16 - 1178645 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966672 186 - 202621043 T a score=273.000000 s hg38.chrUn_KI270749v1 78553 1 + 158759 T s nasLar1.chr3 49239839 1 + 179790006 T i nasLar1.chr3 C 0 C 0 s tarSyr2.KE939343v1 589502 1 - 1178645 T i tarSyr2.KE939343v1 I 16 I 24 e ponAbe2.chr3 69623678 748 + 202140232 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966672 186 - 202621043 T a score=1343.000000 s hg38.chrUn_KI270749v1 78554 24 + 158759 GCATACACATATAACATGTATGTA s nasLar1.chr3 49239840 22 + 179790006 ACATACA--TATAACATGTGTGTA i nasLar1.chr3 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939343v1 589503 24 - 1178645 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966672 186 - 202621043 T a score=-1216.000000 s hg38.chrUn_KI270749v1 78578 7 + 158759 --TGCATAC s nasLar1.chr3 49239862 3 + 179790006 --T----AC i nasLar1.chr3 C 0 C 0 s tarSyr2.KE939343v1 589527 3 - 1178645 TGT------ i tarSyr2.KE939343v1 I 24 I 8 e ponAbe2.chr3 69623678 748 + 202140232 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966672 186 - 202621043 T a score=157.000000 s hg38.chrUn_KI270749v1 78585 8 + 158759 AAAACATA s nasLar1.chr3 49239865 8 + 179790006 GCAATACA i nasLar1.chr3 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939343v1 589530 8 - 1178645 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966672 186 - 202621043 T a score=1043.000000 s hg38.chrUn_KI270749v1 78593 29 + 158759 CACACATAACATGTATGTATGCATACAAA-- s nasLar1.chr3 49239873 27 + 179790006 TACATATAACACATGTGTAT--ATGCAAT-- i nasLar1.chr3 C 0 I 2 s tarSyr2.KE939343v1 589538 24 - 1178645 -------TACATATATGTATTTGTGCATTAC i tarSyr2.KE939343v1 I 8 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966672 186 - 202621043 T a score=60.000000 s hg38.chrUn_KI270749v1 78622 2 + 158759 AC s tarSyr2.KE939343v1 589562 2 - 1178645 AT i tarSyr2.KE939343v1 C 0 C 0 e nasLar1.chr3 49239900 2 + 179790006 I e ponAbe2.chr3 69623678 748 + 202140232 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966672 186 - 202621043 T a score=2212.000000 s hg38.chrUn_KI270749v1 78624 30 + 158759 ACACATATAACATGTATGTATGC-----------ATACAAA- s nasLar1.chr3 49239902 29 + 179790006 ATACATATAACATGTGTGTATAT-----------ATGTGA-- i nasLar1.chr3 I 2 C 0 s tarSyr2.KE939343v1 589564 41 - 1178645 ATACATATAATATGTATTTATGTAAAAGTCAACAATATAG-T i tarSyr2.KE939343v1 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966672 186 - 202621043 T a score=4800.000000 s hg38.chrUn_KI270749v1 78654 15 + 158759 TACATACACATATAA s panTro5.chr3 201966486 15 - 202621043 TACATGCACATATAA i panTro5.chr3 T 186 C 0 s nasLar1.chr3 49239931 11 + 179790006 ----TACACATATAA i nasLar1.chr3 C 0 C 0 s tarSyr2.KE939343v1 589605 15 - 1178645 GATATATAAATATAA i tarSyr2.KE939343v1 C 0 n 0 e ponAbe2.chr3 69623678 748 + 202140232 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=23119.000000 s hg38.chrUn_KI270749v1 78669 162 + 158759 CATGTATGTATGTATAAAATACATACACATATAACAT------GTATACA-ATACACACACATATAACATGTATGTATACAATACATACACATATAACATAT--ATGTATACAATACATACACAAATAACATATATGTATACAATACATACACATATAACATATATGTATG s panTro5.chr3 201966501 165 - 202621043 CATATATGTATGTATACAATACATGCACATATAACATATGTATGTGTGCA-ATACATGCACATATAACATGTATGTGTGCAATACATGCACATATAACATATGTATGTATACAATACATGCACATATAACATCTATGTATACAATACATGCACATATA-----TATGTATG i panTro5.chr3 C 0 C 0 s nasLar1.chr3 49239942 155 + 179790006 CGTGTGTATATGCA------ACACATACATATAACGT------GTGTATACACAAACATACATATAACGTGTGCGTATGGAACACAT--ACATATAACATATATGTGTGTGCAATACAT--ACATGTAACATATGTGCATATGCAATATATACATGTAACATGTGTGTGTA i nasLar1.chr3 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939343v1 589620 0 - 1178645 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=9070.000000 s hg38.chrUn_KI270749v1 78831 109 + 158759 TATACAAGCATAATATGTACATATGTGTATATACAATACATAAATTGCGTTATATATACATATGTATATAAAAATTGCAATGTACGCACATATGTATATATGTATGTAC s panTro5.chr3 201966666 109 - 202621043 TATACATGCATAATATGTACATATGTGTATATACAATATATAAATTGCATAATACATACATATGTATATAAAAATTGCAATGTATGCACATATGTATATATGTATGTAT i panTro5.chr3 C 0 C 0 e nasLar1.chr3 49240097 0 + 179790006 C e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939343v1 589620 0 - 1178645 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e calJac3.chr15 46008539 0 - 98464013 C e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=6687.000000 s hg38.chrUn_KI270749v1 78940 42 + 158759 TGCAATATACATATTGCAATATACATATATACAACATACACA s panTro5.chr3 201966775 42 - 202621043 TGCAATATACATATTGCAATATACATATCTACAATGTATACA i panTro5.chr3 C 0 C 0 s calJac3.chr15 46008539 42 - 98464013 TATAATATAGATATTTGTGtatatacatgtataatatataaa i calJac3.chr15 C 0 C 0 e nasLar1.chr3 49240097 0 + 179790006 C e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE939343v1 589620 0 - 1178645 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=82.000000 s hg38.chrUn_KI270749v1 78982 4 + 158759 CATA s panTro5.chr3 201966817 4 - 202621043 AATA i panTro5.chr3 C 0 C 0 s calJac3.chr15 46008581 4 - 98464013 tatt i calJac3.chr15 C 0 C 0 s tarSyr2.KE940204v1 2530300 4 - 2706325 CACG i tarSyr2.KE940204v1 n 0 n 0 e nasLar1.chr3 49240097 0 + 179790006 C e ponAbe2.chr3 69623678 748 + 202140232 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=3746.000000 s hg38.chrUn_KI270749v1 78986 17 + 158759 TGTATACATGCATGTAT s panTro5.chr3 201966821 17 - 202621043 TGTATACATGTATGTAT i panTro5.chr3 C 0 C 0 s calJac3.chr15 46008585 17 - 98464013 tgtgtatatacatgtat i calJac3.chr15 C 0 C 0 e nasLar1.chr3 49240097 0 + 179790006 C e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=4348.000000 s hg38.chrUn_KI270749v1 79003 21 + 158759 TGCAATATACACATATAT-TAC s panTro5.chr3 201966838 21 - 202621043 TGCAATATACACatatat-tac i panTro5.chr3 C 0 C 0 s nasLar1.chr3 49240097 21 + 179790006 TGCAATACATACATACAA-CAG i nasLar1.chr3 C 0 C 0 s calJac3.chr15 46008602 18 - 98464013 ---aatatatacatatttgta- i calJac3.chr15 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694381 3 + 27742158 I e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=-2116.000000 s hg38.chrUn_KI270749v1 79024 40 + 158759 CATATACAatatatatatt---atatatatt-tatataa--tatat s panTro5.chr3 201966859 43 - 202621043 tatatataatataaatata---ttatatattatatataacttatat i panTro5.chr3 C 0 C 0 s nasLar1.chr3 49240118 28 + 179790006 TTGAT------------TT---TTatacatt-gacctta--tatat i nasLar1.chr3 C 0 N 0 s calJac3.chr15 46008620 36 - 98464013 tatatacaatatatgaattgtaatatacata-tatat--------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694384 24 + 27742158 CATGTATAat------------atatacata-tttgt--------- i saiBol1.JH378125 I 3 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=8325.000000 s hg38.chrUn_KI270749v1 79064 59 + 158759 ataatata-tatttatataatatatataatatatatttatat-aatatatataatatatat s panTro5.chr3 201966902 58 - 202621043 ataatata-ta-atatatattatatatgttatatataaatat-tatatatatattatatat i panTro5.chr3 C 0 I 4 s calJac3.chr15 46008656 57 - 98464013 ---gtttgttacctgtat-ccatgtataatatatacatatttttgtatatacaatatataa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694408 48 + 27742158 ---gtcta-tacatgtataatata---------tacatatttgtatatatacaatatataa i saiBol1.JH378125 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I a score=192.000000 s hg38.chrUn_KI270749v1 79123 56 + 158759 ttatataatatatataatatatatttatataatatatataatatattatatattta s calJac3.chr15 46008713 35 - 98464013 at------tatacat-acatatGTTTATAATATAGTGCAa--------------tg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694456 40 + 27742158 at-tgtaatatacat-acatatgttttttacatgtataca--------------tg i saiBol1.JH378125 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e macFas5.chr2 60961137 0 - 192460366 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966960 4 - 202621043 I a score=7306.000000 s hg38.chrUn_KI270749v1 79179 120 + 158759 tataatatatatattatattatatatttatataatatatatattatattatatatttatat-aatatatata-ttata-ttatatatttatata-----atatatatattatattatatatttatata--- s macFas5.chr2 60961137 120 - 192460366 tgtaatatgtacata----tatgtgtatatacaatatataaattataatatacatacata--agtatataaaattgtaattacatacatatgtatat--atgtatgcattgcaatatacatatatatt--- i macFas5.chr2 C 0 C 0 s calJac3.chr15 46008748 109 - 98464013 tac-atacatacata----tatgtat---tactatacata---tataa-ctatgtgtatatGAAtgtattaggtt----ctctagagggacagaataggatatatata------tatatatatatgtggaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694496 103 + 27742158 tataatatatacata----tttgtgtatatacaatatataaattatac-atatgtttat---aatatatt------------tcaatgtacatacta--atatacata------catacatgtatgtatta i saiBol1.JH378125 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966960 4 - 202621043 I a score=-287.000000 s hg38.chrUn_KI270749v1 79299 1 + 158759 a s macFas5.chr2 60961257 1 - 192460366 a i macFas5.chr2 C 0 I 1 s rhiRox1.KN296641v1 1342349 1 - 1467263 g i rhiRox1.KN296641v1 N 0 I 11816 s calJac3.chr15 46008857 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694599 1 + 27742158 c i saiBol1.JH378125 C 0 C 0 e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966960 4 - 202621043 I a score=1903.000000 s hg38.chrUn_KI270749v1 79300 15 + 158759 tatatatatat----TTTT s macFas5.chr2 60961259 14 - 192460366 tatatatatat----TTT- i macFas5.chr2 I 1 C 0 s calJac3.chr15 46008858 15 - 98464013 tatatatatatatgt---- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694600 11 + 27742158 tatacatatat-------- i saiBol1.JH378125 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204734692 285 - 205426864 I e panTro5.chr3 201966960 4 - 202621043 I a score=11558.000000 s hg38.chrUn_KI270749v1 79315 67 + 158759 AAAACTATGTATATAT------GAAtgtattagtcagggttctccagagcgaaagcataggatatatattctc s panTro5.chr3 201966964 67 - 202621043 AAAACTATGTATATAT------GAAtgtattagtcagggttctccagagggaaagaataggatatatattctc i panTro5.chr3 I 4 C 0 s panPan2.chr3 204734977 67 - 205426864 aaaactatgtatagat------gaatgtattagtcagggttctccagagggaaagaataggatatattttctc i panPan2.chr3 I 285 C 0 s macFas5.chr2 60961273 17 - 192460366 ----------atatat------atatatatttg---------------------------------------- i macFas5.chr2 C 0 C 0 s calJac3.chr15 46008873 50 - 98464013 ggaaatatatatatatatgtggaaatatatata-----tatatatata--------------tatatat---- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694611 35 + 27742158 --aactatgtgtatat------gaatgtattag-----gttatctaga------------------------- i saiBol1.JH378125 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e colAng1.NW_012114711v1 6684403 176 - 10587913 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=910.000000 s hg38.chrUn_KI270749v1 79382 1 + 158759 a s panTro5.chr3 201967031 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735044 1 - 205426864 a i panPan2.chr3 C 0 C 0 s macFas5.chr2 60961290 1 - 192460366 a i macFas5.chr2 C 0 C 0 s colAng1.NW_012114711v1 6684579 1 - 10587913 a i colAng1.NW_012114711v1 I 176 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e aotNan1.NW_018502033v1 3688433 201 + 4093027 I e cebCap1.NW_016107467v1 231785 296 - 4835464 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e saiBol1.JH378125 27694646 0 + 27742158 C e calJac3.chr15 46008923 0 - 98464013 C e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=2552.000000 s hg38.chrUn_KI270749v1 79383 1 + 158759 g s panTro5.chr3 201967032 1 - 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735045 1 - 205426864 g i panPan2.chr3 C 0 C 0 s macFas5.chr2 60961291 1 - 192460366 a i macFas5.chr2 C 0 C 0 s colAng1.NW_012114711v1 6684580 1 - 10587913 g i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008923 1 - 98464013 g i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694646 1 + 27742158 g i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232081 1 - 4835464 g i cebCap1.NW_016107467v1 I 296 C 0 s aotNan1.NW_018502033v1 3688634 1 + 4093027 g i aotNan1.NW_018502033v1 I 201 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e manLeu1.NW_012098965v1 841151 178 - 924385 I e macNem1.NW_012018021v1 11073481 178 - 17224310 I e rheMac8.chr2 66029270 178 + 204787373 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=30261.000000 s hg38.chrUn_KI270749v1 79384 6 + 158759 ggagtt s panTro5.chr3 201967033 6 - 202621043 ggagtt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735046 6 - 205426864 ggagtt i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66029448 6 + 204787373 ggaatt i rheMac8.chr2 I 178 C 0 s macFas5.chr2 60961292 6 - 192460366 ggaatt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073659 6 - 17224310 ggaatt i macNem1.NW_012018021v1 I 178 C 0 s manLeu1.NW_012098965v1 841329 6 - 924385 ggaatt i manLeu1.NW_012098965v1 I 178 C 0 s colAng1.NW_012114711v1 6684581 6 - 10587913 ggaatt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008924 6 - 98464013 agagtt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694647 6 + 27742158 gaagtt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232082 6 - 4835464 ggagtt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3688635 6 + 4093027 ggagtt i aotNan1.NW_018502033v1 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e chlSab2.chr22 64458907 202 - 101219884 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=383261.000000 s hg38.chrUn_KI270749v1 79390 60 + 158759 tattaagtagtattaactcagatgatcacagggtcccacagtaggctgtctacaagctga s panTro5.chr3 201967039 60 - 202621043 tattaagtagtattaactcagacgatcacagggtcccacagtaggctgtctacaagctga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735052 60 - 205426864 tattaagtagtattaactcagacgatcacagggtcccacagtaggctgtctacaagctga i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66029454 60 + 204787373 tattaagtagtattaactcacactattgcagggtcccacagtaggctgtctacaagctga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961298 60 - 192460366 tattaagtagtattaactcacactattgcagggtcccacagtaggctgtctacaagctga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073665 60 - 17224310 tattaagtagtattaactcacactattgcagggtcccacagtaggctgtctacaagctga i macNem1.NW_012018021v1 C 0 C 0 s chlSab2.chr22 64459109 60 - 101219884 tattaagtagtattaactcacactattgcagggtcccacagtaggctgtctacaagctga i chlSab2.chr22 I 202 C 0 s manLeu1.NW_012098965v1 841335 60 - 924385 tattaagtagtattaactcacactattgcagggtcccacagtaggctgtctacaagctga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684587 60 - 10587913 tattaagtagtattagctcacactatcgcagggtcctacagtaggctgtctacaagctga i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008930 60 - 98464013 tattaagtagtattaactcacatgatcacagggtcccataataggctgtccgtaagctga i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694653 60 + 27742158 tattaagtagtattaactcacacggtcacagggtcccataataggctgtctgtaagctga i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232088 60 - 4835464 tactaagtagtattaactcacacgatcacagagtcccataataggctatctgtaagctga i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3688641 60 + 4093027 tattaagtagtattaactcacacgatcacagggtcccataatagtctgtctgtaagctga i aotNan1.NW_018502033v1 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e cerAty1.NW_012009469v1 17385293 230 - 41321030 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=2206828.000000 s hg38.chrUn_KI270749v1 79450 299 + 158759 ggagcaaggaaaccagtccgagtcccaaagctgaagaacttggagtccgatttt-----------------cagcatgggagacagatgtagaatgggagtctaagccagtctagccttttcacgtttttctgcctgctttatattctggccacactggcagctgattagattgtgcccacccacattgagggtgggtctgcctttcccagcccactgactcaaatgttaatct-ctttggcaacacccttacagacacacccaggatcaatactttgcatccttcaatccaatcaggttgacactcagtgttaaac s panTro5.chr3 201967099 299 - 202621043 ggagcaaggaaaccagtcccaggcccaaagctgaagaacctggagtccgatttt-----------------cagcatgggagacagatgtagaatgggaggctaagccagtctagccttttcacatttttctgcctgctttatattctggccacactggccgctgataagattgtgcccacccacactgagggtgggtctgcctttcccagcctactgactcaaatgttaatct-ctttggcaacaccctcacagacacacccaggatcaatactttgcatccttcaatccaatcaggttgacactcagtgttaaac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735112 299 - 205426864 ggagcaaggaaaccagtcccagtcccaaagctgaagaacttggagtccgatttt-----------------cagcatgggagacagatgcagaatgggaggctaagccagtctagccttttcatgtttttctgcctgctttatattctggccacactggcagctgattagattgtgcccacccacactgagggtgggtctgcctttcccagcccactgactcaaatgttaatct-ctttggcaacaccctcacagacacacccaggatcaatactttgcatccttcaatccaatcaggttgacactcagtgttaaac i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66029514 296 + 204787373 ggagcaaggaaaccagtctgagtcccaaagctgaagaatctggagtccgatttt-----------------cagcatgggagacagatgtaggctgggaggctaagccagtctagccttttcacgtttccctgcctgc----tattctggccacactggcagctgattagattgtgcccacccagattaagggtgggtctgcctttctcagtccgctgactcaaatgttaatctcctttggcaacaccctcacagacacatccagaatcaatacgttgcatccttcaatccaatcaggttgacactcagtgttaaac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961358 300 - 192460366 ggagcaaggaaaccagtctgagtcccaaagctgaagaatctggagtccgatttt-----------------cagcatgggagacagatgtaggctgggaggctaagccagtctagccttttcacgtttccctgcctgctttatattctggccacactggcagctgattagattgtgcccacccagattaagggtgggtctgcctttctcagtccactgactcaaatgttaatctcctttggcaacaccctcacagacacatccagaatcaatacgttgcatccttcaatccaatcaggttgacactcagtgttaaac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11073725 300 - 17224310 ggagcaaggaaaccagtctgagtcccaaagctgaagaatctggagtctgatttt-----------------cagcatgggagacagatgtaggctgggaggctaagccagtctagccttttcacgtttccctgcctgctttatattctggccacactggcagctgattagattgtgcccacccagattaagggtgggtctgcctttctcagtccgctgactcaaatgttaatctcctttggcaacaccctcacagacacatccagaatcaatacgttgcatccttcaatccaatcaggttgacactcagtgttaaac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385523 300 - 41321030 ggagcaaggaaaccagtctgagtcccaaagctgaagaatctggagtccgatttt-----------------cagcatgggagacagatgtaggctgggaggctaagccagtctagccttttcacgtttccctgcctgctttatattctggccacactggcagctgattagattgtgcccacccagattaagggtgggtctgcctttctcagtccactgactcaaatgttaatctcctttggcaacactctcacagacacatccaggatcaatacgttgcatccttcaatccaatcaggttgacactcagtgttaaac i cerAty1.NW_012009469v1 I 230 C 0 s chlSab2.chr22 64459169 300 - 101219884 ggagcaaggaaaccagtctgagtcccaaagctgaagaatctggagtccgatttt-----------------cagcatgggagagagatgtaggctgggaggctaagccagtctagccttttcacgtttctctgcctgctttatattccggccacactggcagctgattagattgtgcccacccagattaagggtgggtctgcctttctcagtccactgactcaaatgttaatctcctttggcaacaccctcacagacacatccaggatcaatactttgcatccttcaatccaatcaggttgacactcagtgttaaac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841395 300 - 924385 ggagcaaggaaaccagtctgagtcccaaagctgaagaatctggagtccgatttt-----------------cagcacgggagacagatgtaggctgggaggctaagccagtctagccttttcacgtttccctgcctgctttatattctggccacactggcagctgattagattgtgcccacccagattaagggtgggtctgcctttctcagtccactgactcaaatgttaatctcctttggcaacaccctcacagacacatccaggatcaatactttgaatccttcaatccaatcaggttgacactcagtgttaaac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684647 288 - 10587913 ggagcaaggaaaccagtctgagtcccaaagctgaaga------------atttt-----------------cagcatgggagacagatgtagactgggaggctaagccagtctagccttttcacatttctctgcctgctttatattctggccacactggcagctgattagattgtgcccacccagattaagggtgggtctgcctttctcagtccactgactcaaacgttaatctcctttggcaacaccctcacagacacatccaggatcaatactttgcatccttcaatccaatcaggttgacactcagtgttaaac i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46008990 316 - 98464013 gaagcaagaaaactagtctgagtcccaaagctaaagaacttggagtccgtttttccagagaaggaagcatccagcacaggagacagatggaggctgggaggctaagccagtctagccttttcaagtttttctgcctgctttatattttggccacactggcagctgattagattgtgccca-ccagtttaagggtggatctgcctttcctagcctgctgactcaaatattaatctcctttgacaacactcttgcaaacacacccaggaagaatactttgcatccttcaatccaatcgagttgacactcagtgttaatc i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27694713 316 + 27742158 gaagcaagaaaactagtctgagtcccaaagctgaagaacttggagtccatttttccagagaaggaagcatccagcacaggagacagatgtaggctgggaggctaagccagtctagccttttcacatttttctgcctgctttatattttggccacactggcagctgattagattgtgccca-ccagattaagaatcggtctgcctttcctagcctactgactcaaatattaatctcctttgacaacacttttgcaaacacacccaggatcaatactttgcatccttcaatccaatcaagttgacactcagtgttaatc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232148 315 - 4835464 gaagcaagaaaactagtcggagtcccaaagctgaagaacttggagtccatttttccagagaaggaagcatccagcacaggagacagatgta-gctgggaggctaagccagtctagccttttcacatttttctgcctgctttatattttggccacactggcagctgattacattgtgccca-ccagattaagggtgggtctgcctttcctagcctactgactcaaatattaatctcctttgacaacactcttgcaaacacacccaggatcaatactttgcatccttcaatccaatcaggttgacactcagtgtaaatc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3688701 306 + 4093027 gaagcaagaaaactag----------aatgctgaagaacttggagtccgtttttccagagaaggaagcttccagcacaggagacagatgtaggctgggaggctaagccagtctagccttttcacgtttttctgcctgctttatattttggccacactggcagctgattagattgtgccca-ccagattaagggtgggtctgcctttcctagcctattgactcaaatattaatctcctttgacaacactcttgcaaacacacccaggatcaatactttgcatccttcaatccaatcaagttgacactcagtgttaatg i aotNan1.NW_018502033v1 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11022950 0 + 30473821 C e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=222285.000000 s hg38.chrUn_KI270749v1 79749 31 + 158759 atcccaATGAATATATATTGCAAGAAGAAAT s panTro5.chr3 201967398 31 - 202621043 atcccaATGAATATATATGGCAAGAAGAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735411 31 - 205426864 atcccaatgaatatatatTGCAAGAAGAAAT i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66029810 31 + 204787373 atcccaACGAATATATATTGCAAGAAGAAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961658 31 - 192460366 atcccaACGAATATATATTGCAAGAAGAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074025 31 - 17224310 atcccaACGAATATATATTGCAAGAAGAAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385823 31 - 41321030 atcccaACGAATATATATTGCAAGAAGAAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459469 31 - 101219884 atcccaATGAATACATATTGCAAGAAGAAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841695 31 - 924385 atcccaACGAATATATATTGTAAGAAGAAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684935 31 - 10587913 atcccaATGAATATATATTGCAAGAAGAAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46009306 28 - 98464013 atcacaATGAATATATGTTCC---AAGAAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695029 31 + 27742158 atcacaATGAATATACATTCCAAGAAGAAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232463 31 - 4835464 atcacaATGAATATATATTCTAAGAAGAAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689007 31 + 4093027 accacaatgaatatatCTTCCAAGAAGAAAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11022950 31 + 30473821 ATTGCTATATATACATATTGTATATATCAAT i otoGar3.GL873534 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e canFam3.chr20 16569236 0 + 58134056 C e dasNov3.JH563077 1752040 22 - 2187301 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=97979.000000 s hg38.chrUn_KI270749v1 79780 16 + 158759 ATATGTGTATTTTT----------TC s panTro5.chr3 201967429 16 - 202621043 ACATGTGTATTTTT----------TC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735442 16 - 205426864 ACATGTGTATTTTT----------TC i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66029841 16 + 204787373 ACATGTGTATTTTT----------TC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961689 16 - 192460366 ACATGTGTATTTTT----------TC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074056 16 - 17224310 ACATGTGTATTTTT----------TC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385854 16 - 41321030 ATATGTGTATTTTT----------TC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459500 16 - 101219884 AGATGTGTATTTTT----------TC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841726 16 - 924385 ATATGTGTATTTTT----------TC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684966 16 - 10587913 ATATGTGTATTTTT----------TC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46009334 16 - 98464013 AAGTGTATATTCCT----------TC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695060 16 + 27742158 AAATATGTATTCCT----------TC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232494 15 - 4835464 AA-TGTGTATTCCT----------TC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689038 16 + 4093027 AAATGTGTATTCCT----------TC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11022981 16 + 30473821 ATGAATACATTGCT----------TT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569236 26 + 58134056 ATATTAGTAATATTAAAAACAACATT i canFam3.chr20 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e dasNov3.JH563077 1752040 22 - 2187301 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=598238.000000 s hg38.chrUn_KI270749v1 79796 74 + 158759 TTACTATATTACCATATGTCAACTATAAGAAAATAGTGTGGAAGAAGAGAAG-AAAAACCTTAATACACACATAA s panTro5.chr3 201967445 74 - 202621043 TTACTATATTACCATATGTCAACTATAAGAAAATAGTGTGGAAGAAGAGAAG-AAAAACCTTAATACACACATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735458 74 - 205426864 TTACTATATTACCATATGTCAACTATAAGAAAATAGTGTGGAAGAAGAGAAG-AAAAACCTTAATACACACATAA i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66029857 74 + 204787373 TTACTATATTACCATATGTCAACTATAAGAAAATAGTGTGGAAGAAGAGAAG-AAAAACCTTAATAAACACATAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961705 74 - 192460366 TTACTATATTACCATATGTCAACTATAAGAAAATAGTGTGGAAGAAGAGAAG-AAAAACCTTAATAAACACATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074072 74 - 17224310 TTACTATATTACCATATGTCAACTATAAGAAAATAGTGTGGAAGAAAAGAAG-AAAAACCTTAATAAACACATAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385870 74 - 41321030 TTACTATATTACCATATGTCAACTATAAGAAAATAGTGTGGAAGAAGAGAAG-AAAAACCTTAATAAACACATAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459516 74 - 101219884 TTACTATATTACCATATGTCAACTATAAGAAAATAGTGTGGAAGAAGAGAAG-AAAAACCTTAATAAACACATAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841742 74 - 924385 TTACTATATTACCATATGTCAACTATAAGAAAATAGTGTGGAAGAAGAGAAG-AAAAACCTTAATAAACACATAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6684982 74 - 10587913 TTACTATATTACCATATGTCAACTCTAAGAAAATAGTATGGAAGAAGAGAAG-AAAAACCTTAATAAACACATAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46009350 70 - 98464013 TTAACATATTACCACGTGTCAACTATAAGAAAATAACATGGAAGGTG-GAAGGAAAAAGCTTAAT----ACATAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695076 71 + 27742158 TTAATATATTACCATATGTCAACTATAAGAAAATAGCATGGATGGCGAGAAGAAAAAAGCTTAAT----ACATAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232509 71 - 4835464 TTAATATATTACCATATGTCAACTATAAGAAAATAGCATGGAAGGCGAGAAGAAAAAAGCTTAAT----ACATAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689054 71 + 4093027 TTAATATATTACCGTATGTCAACTATAAGAAAATGTCATGGAAGGCGAGAAGAAAAAAGCTTAAT----ACATAG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11022997 73 + 30473821 GTATTATAGCATCAGATATCGAT--TAAGAAAATAGTGTTGATAAAAAGGAGAAAAAATATGAATATAAATATAG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569262 69 + 58134056 GTATTATGTTATCAGATGTCAACTCTAGGAAAATGATGTGGAGGAGAAGGAG-AAAAAA-TTAAT----GCTCAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752062 72 - 2187301 TTGTTATGTTAGCAGGTGTCAACTCTAGGAAAATGTCAGGTTGGGGAAGAAG-CAAACATTTTAT--ACACATAG i dasNov3.JH563077 I 22 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=444868.000000 s hg38.chrUn_KI270749v1 79870 44 + 158759 GTAAAGCCAGAACCATCCTTGTAGAATTAGGATATATAATATAT s panTro5.chr3 201967519 44 - 202621043 GTAAAGCCAGAAACATCCTTGTAGAATTAGGATATATAATATAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735532 44 - 205426864 GTAAAGCCAGAAACATCCTTGTAGAATTAGGATATATAATATAT i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66029931 44 + 204787373 GTAACGCCAGAAACATCCTTGTAGAGTTAGGATATATAATATAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961779 44 - 192460366 GTAACGCCAGAAACATCCTTGTAGAGTTAGGATATATAATATAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074146 44 - 17224310 ATAACGCCAGAAACATCCTTGTAGAGTTAGGATATATAATATAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385944 44 - 41321030 GTAACGCCAGAAACATCCTTGTAGAGTTAGGATATATAATATAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459590 44 - 101219884 GTAACGCTAGAAACATCCTTGTAGAGTTAGGATATATAATATAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841816 44 - 924385 GTAACGCCAGAAACATCCTTGTAGAGTTAGAATATATAATATAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685056 44 - 10587913 GTAACGCCAGAAACATCCTTGTAGAACTAGGATACATAATATAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46009420 43 - 98464013 G-AAAACCAGAAACATCCTTGTAGAATTAGGATATACATTATAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695147 44 + 27742158 GAAAAACCAGAAACATCCTTGTAGAATTAGGATATAGATTATAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232580 44 - 4835464 GAAAAACCAGACACATTCTTGTAGAATTAGGATATACATTACAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689125 44 + 4093027 GAAAAACCAGAAACATCCTTGTAGAATTAGGATATATATTATAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1589981 44 - 9149476 GTAAAGCCAGAAACATCAGTGTAGAATTAGGATAAATAATATAT i micMur3.chr32 N 0 I 84 s otoGar3.GL873534 11023070 44 + 30473821 GTCAAGCCAGAAAAACCAGTGTAGAATTAGAATAGATAATATAT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569331 44 + 58134056 GTAAAATCAGAAACATCAGCATAAAATTATTATAGATAACATAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752134 44 - 2187301 CTAAAAGCAGAAAGATGAGTATAGAATTGTGACAGATAATATAT i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=83865.000000 s hg38.chrUn_KI270749v1 79914 11 + 158759 CTCTATGTTTT s panTro5.chr3 201967563 11 - 202621043 CTCTATGTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735576 11 - 205426864 CTCTATGTTTT i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66029975 11 + 204787373 CTCTGTGTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961823 11 - 192460366 CTCTGTGTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074190 11 - 17224310 CTCTGTGTTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17385988 11 - 41321030 CTCTGTGTTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459634 11 - 101219884 CTCTGTGTTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841860 11 - 924385 CTCTGTGTTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685100 11 - 10587913 CTCTATGTTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46009463 6 - 98464013 CTCTA-----T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695191 11 + 27742158 CTCTATATTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232624 11 - 4835464 CTCTCTATTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689169 11 + 4093027 CTCTGTATTTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11023114 9 + 30473821 --TTATCTATT i otoGar3.GL873534 C 0 I 3 s canFam3.chr20 16569375 11 + 58134056 CTCTATTTGCT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752178 11 - 2187301 CTATGTATTTT i dasNov3.JH563077 C 0 I 5 e micMur3.chr32 1590025 84 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69623678 748 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=110080.000000 s hg38.chrUn_KI270749v1 79925 16 + 158759 AATCTTGCTGTT--TTTT s panTro5.chr3 201967574 16 - 202621043 AATCTTGCTGTT--TTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735587 16 - 205426864 AATCTTGCTGTT--TTTT i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69624426 16 + 202140232 AATCTTGCTATT--GTTT i ponAbe2.chr3 I 748 I 190 s rheMac8.chr2 66029986 16 + 204787373 AATCTTGCTGTT--TCCC i rheMac8.chr2 C 0 I 9 s macFas5.chr2 60961834 16 - 192460366 AATCTTGCTGTT--TCCC i macFas5.chr2 C 0 I 9 s macNem1.NW_012018021v1 11074201 16 - 17224310 AATCTTGCTGTT--TCCC i macNem1.NW_012018021v1 C 0 I 9 s cerAty1.NW_012009469v1 17385999 16 - 41321030 AATCTTGCTGTT--TCCC i cerAty1.NW_012009469v1 C 0 I 10 s chlSab2.chr22 64459645 16 - 101219884 AATCTTGCTGTT--TTTT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 841871 16 - 924385 AATCTTGCTGTT--TCCC i manLeu1.NW_012098965v1 C 0 I 9 s colAng1.NW_012114711v1 6685111 16 - 10587913 AATCTTGCTGTT--TTTT i colAng1.NW_012114711v1 C 0 I 2 s calJac3.chr15 46009469 17 - 98464013 AATCTTGCTGAG-TTTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695202 16 + 27742158 AATCTTGCTGAG--TTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232635 16 - 4835464 AATCTTGCTGAG--TTTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689180 18 + 4093027 AATCTTGCTGAGTTTTCT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11023126 16 + 30473821 ATTTTTAATTTT--TCTC i otoGar3.GL873534 I 3 I 1 s canFam3.chr20 16569386 16 + 58134056 AATCTCCCTGAG--TTTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752194 15 - 2187301 ACTCTGAAAGTT--TTT- i dasNov3.JH563077 I 5 C 0 e micMur3.chr32 1590025 84 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=360393.000000 s hg38.chrUn_KI270749v1 79941 48 + 158759 GTTTTCCCACGGCCATGTTTCTAAATATGCCTTAACTAGGTACAG---TAC s panTro5.chr3 201967590 48 - 202621043 GTTTTCCCACAGCCATGTTTCTAAATATGCCTTAACTAGGTACAG---TAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735603 48 - 205426864 GTTTTCCCACAGCCATGTTTCTAAATATGCCTTAACTAGGTACAG---TAC i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030011 48 + 204787373 CCCCCGCCACAGCCATGCTTCTAAATATGCCTGAATTAGGTACAG---TAC i rheMac8.chr2 I 9 C 0 s macFas5.chr2 60961859 48 - 192460366 CCCCCGCCACAGCCATGCTTCTAAATATGCCTGAATTAGGTACAG---TAC i macFas5.chr2 I 9 C 0 s macNem1.NW_012018021v1 11074226 48 - 17224310 CCCCCGCCACAGCCATGCTTCTAAATATGCCTGAATTAGGTACAG---TAC i macNem1.NW_012018021v1 I 9 C 0 s cerAty1.NW_012009469v1 17386025 48 - 41321030 CCCCCGCCACAGCCATGCTTCTAAATATGCCTGAATTAGGTACAG---TAC i cerAty1.NW_012009469v1 I 10 C 0 s chlSab2.chr22 64459662 48 - 101219884 CCCCTCCCACAGCCATGCTTCTAAATATGCCTGAATTAGGTACAG---TAC i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 841896 48 - 924385 CCCCCGCCACAGCCATGCTTCTAAATATGCCTGAATTAGGTACAG---TAC i manLeu1.NW_012098965v1 I 9 C 0 s colAng1.NW_012114711v1 6685129 48 - 10587913 TTCTCCCCACAGCCATGCTTCTAAATATGCCTGAATTAGGTACAG---TAC i colAng1.NW_012114711v1 I 2 C 0 s calJac3.chr15 46009486 47 - 98464013 TTTTCCCCACAGCCATTCTTCTAAATATG-CTGAACTAAATAAAG---TAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695218 47 + 27742158 TTTCCCCCACAGCCATTCTTCTAAATATG-CTGAACTAAATACAG---TAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232651 47 - 4835464 TTTCCCCCACAGCCATTCTCCTAAATATG-CTGAACTAAATACAG---TAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689198 47 + 4093027 TTTTCCCCACAGCCATTCTTCTAAATATG-CTGAACTAAATACAA---TAC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11023143 51 + 30473821 GTTTTTTAATAGCCAAGCTTCCAAATACACTCGAACTGTGCAGAGACATAT i otoGar3.GL873534 I 1 I 2 s canFam3.chr20 16569402 47 + 58134056 -TTTTTTTTCAGCCAGCCTTCCAAATATACTTGAACTCTGTCTGC---TAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752209 41 - 2187301 -------CACAGTCAGGCTTCTGAATATACCTTAACTGTGTGCAG---AAT i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1590025 84 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624442 190 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=618665.000000 s hg38.chrUn_KI270749v1 79989 58 + 158759 AGACTTGGCAAAAACTCTTTCCAGT--------C--------AAGGTGCATACATAGGTAGAATTTTCTGTTTC s panTro5.chr3 201967638 58 - 202621043 AGACTTGGCAAAAACTGTTTCCAGT--------C--------AAGGTGCATACACAGGTAGAATTTTCTGTTTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735651 58 - 205426864 AGACTTGGCAAAAACTCTTTCCAGT--------C--------AAGGTGCATACACAGGTAGAATTTTCTGTTTC i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030059 58 + 204787373 GGACTTGGCAAAAACTCTTTCCAGT--------C--------AAGGTGCATACTTAGGTAGAATTTTCTGTTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961907 58 - 192460366 GGACTTGGCAAAAACTCTTTCCAGT--------C--------AAGGTGCATACTTAGGTAGAATTTTCTGTTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074274 58 - 17224310 GGACTTGGCAAAAACTCTTTCCAGT--------C--------AAGGTGCATACTTAGGTAGAATTTTCTGTTTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386073 58 - 41321030 GGACTTGGCAAAAACTCTTTCCAGT--------C--------AAGGTGCATACTTAGGTAGAATTTTCTGTTTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459710 58 - 101219884 GGACTTGGCAAAAACTCTTTCCAGT--------C--------AAGGTGCATATTTAGGTAGAATTTTCTGTTTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 841944 58 - 924385 GGACTTGGCAAAAACTCTTTCCAGT--------C--------AAGGTGCATACTTAGGTAGAATTTTCTGTTTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685177 58 - 10587913 GGACTTGGCAAAAACTCTCTCCAGT--------C--------AAGGTGCATACTTAGGTAGAATTTTCTGTTTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46009533 58 - 98464013 AGACCTGGCAAAAACTCTTTCCAGT--------C--------AAGGTGCACACCTAGGTAGAAGTTTCTGTTTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695265 58 + 27742158 AGACCTGGCAAAAACTCTTTCCAGT--------C--------AAGGTGCACACTTAGGTAGAAGTTTCTGTTTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232698 58 - 4835464 AGACCTGGCAAAAGCTCTTTCCAGT--------C--------AAGGTGCACACCTAGGTAGAAGTTTCTGTTTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689245 58 + 4093027 AGACCTGGCAAAAACTCTTTCCAGT--------C--------AAGGTGCACACCTAGGTAGAAGTTTCTGTTTC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1590109 58 - 9149476 AGACGTGGCAAAAACTCTTTCCAGC--------C--------AAGTCGCATGCCTAGGTAAAAATTTCTGTTTT i micMur3.chr32 I 84 C 0 s otoGar3.GL873534 11023196 58 + 30473821 AAAACTGGCAAAAACTCTTTTCAAT--------C--------AAGGTTCATGCCTAGGTAAAAAATTCTCTTTA i otoGar3.GL873534 I 2 I 528 s canFam3.chr20 16569449 65 + 58134056 AACCCTAGC-AGATCAGTCTCCAGTCAATTGTCC--------AAAGTGAAAACCTAGGCAGAAATTTCAGTTTC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752250 66 - 2187301 AAACCTGGCAAAAACACTTACTAGT--------CAGTATTTTAAGATACTTGCCTACATGGATATTTCTGTTTC i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624442 190 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=85088.000000 s hg38.chrUn_KI270749v1 80047 7 + 158759 AAGAATG s panTro5.chr3 201967696 7 - 202621043 AAGAATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735709 7 - 205426864 AAGAATG i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030117 7 + 204787373 AAGAGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961965 7 - 192460366 AAGAGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074332 7 - 17224310 AAGAGTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386131 7 - 41321030 AAGAGTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459768 7 - 101219884 AAAAGTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842002 7 - 924385 AAGAGTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685235 7 - 10587913 AAAAGTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46009591 7 - 98464013 AAGAATG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695323 7 + 27742158 AAGAATG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232756 7 - 4835464 AAGAATG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689303 7 + 4093027 AAGAATG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1590167 7 - 9149476 AAAAATG i micMur3.chr32 C 0 I 806 s otoGar3.GL873534 11023782 7 + 30473821 AAGAATG i otoGar3.GL873534 I 528 C 0 s canFam3.chr20 16569514 7 + 58134056 AAGAATG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752316 7 - 2187301 AAGAATG i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624442 190 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=65051.000000 s hg38.chrUn_KI270749v1 80054 8 + 158759 ATTGATAA s panTro5.chr3 201967703 8 - 202621043 ATTGATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735716 8 - 205426864 ATTGATAA i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030124 8 + 204787373 ATTGATAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961972 8 - 192460366 ATTGATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074339 8 - 17224310 ATTGATAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386138 8 - 41321030 ATTGATAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459775 8 - 101219884 ATTGATAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842009 8 - 924385 ATTGATAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685242 8 - 10587913 ATTGATAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46009598 8 - 98464013 ATTCATAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695330 8 + 27742158 ATTCATAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232763 8 - 4835464 ATTCAAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689310 8 + 4093027 ATTCATAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11023789 8 + 30473821 ATTCATGC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569521 8 + 58134056 ACTCATGC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752323 8 - 2187301 ATTCACAC i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624442 190 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=502077.000000 s hg38.chrUn_KI270749v1 80062 60 + 158759 ACAGATGGtgtatctgtcaagttt---ctccagagaaaaataaacaataaaaaatgtgtagac s panTro5.chr3 201967711 60 - 202621043 ACAGATGGtgtatccgtcaagatt---ctccagagaaaaataaacaataaaaaatgtgtagac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735724 60 - 205426864 ACAGATGGtgtatccgtcaagatt---ctccagagaaaaataaacaataaaaaatgtgtagac i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030132 60 + 204787373 ACAGATGGtgcatcagtcaagatt---ctccagagaaaaagaaacaattaaaaatgtgtagac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60961980 60 - 192460366 ACAGATGGtgcatcagtcaagatt---ctccagagaaaaagaaacaattaaaaatgtgtagac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074347 60 - 17224310 ACAGATGGtgcatcagtcaagatt---ctccagagaaaaagaaacaattaaaaatgtgtagac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386146 60 - 41321030 ACAGATGGtgcatcagtcaagatt---ctccagagaaaaagaaacaattaaaaatgtgtagac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459783 60 - 101219884 ACAGATGGtgtatcagtcaagatt---ctccagagaaaaagaaacaattaaaaatgtgtagac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842017 60 - 924385 ACAGATGGtgcatcagtcaagatt---ctccagggaaaaagaaacaattaaaaatgtgtagac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685250 60 - 10587913 ACAGATGGtgtatcagtcaagatt---ctccagagaaaaagaaacaagtaaaaatgtgtagac i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46009606 60 - 98464013 AGAGATGGtgtatcagtcaagact---ctccagagaaaaagaagcaataaaaaatgtgtagat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695338 60 + 27742158 AGAGATGGtgtatcagtcaagatt---ctccagagaaaaagaagcaataaaaaatgtgtagat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232771 59 - 4835464 AGAGATGGtgtatcagtcaagatt---ctccagagaaaaagaagcaat-aaaaatgtgtagat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689318 63 + 4093027 AGAGATGGtgtatcagtcaagattctcctccagagaaaaagaagcaataaaaaatgtgtagat i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11023797 57 + 30473821 AAGGAAGAtgtatcagtcataatt---ctccaaagaaacagaatcaat-aagaatgtatag-- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569529 57 + 58134056 ATATAAAGTAAattattcagggtt---ctccagaaaaatagaaacaacaatgtgtgtgtg--- i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624442 190 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e dasNov3.JH563077 1752331 0 - 2187301 C e nomLeu3.chr21 67552670 125 + 86207423 I a score=-4967.000000 s hg38.chrUn_KI270749v1 80122 4 + 158759 agat s panTro5.chr3 201967771 4 - 202621043 agat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735784 4 - 205426864 agat i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69624632 4 + 202140232 agac i ponAbe2.chr3 I 190 I 462 s rheMac8.chr2 66030192 2 + 204787373 ag-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962040 2 - 192460366 ag-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074407 2 - 17224310 ag-- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386206 2 - 41321030 ag-- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459843 2 - 101219884 ag-- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842077 2 - 924385 ag-- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685310 2 - 10587913 ag-- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46009666 2 - 98464013 ag-- i calJac3.chr15 C 0 I 2 s saiBol1.JH378125 27695398 2 + 27742158 ag-- i saiBol1.JH378125 C 0 I 2 s cebCap1.NW_016107467v1 232830 2 - 4835464 ag-- i cebCap1.NW_016107467v1 C 0 I 2 s aotNan1.NW_018502033v1 3689381 2 + 4093027 ag-- i aotNan1.NW_018502033v1 C 0 I 2 s canFam3.chr20 16569586 1 + 58134056 ---t i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11023854 0 + 30473821 C e dasNov3.JH563077 1752331 0 - 2187301 C e nomLeu3.chr21 67552670 125 + 86207423 I a score=248273.000000 s hg38.chrUn_KI270749v1 80126 59 + 158759 ggatgaatggatga-------------------------------------atg--------gatggaGaaagagacagagagagagagaaatagatttatttt s panTro5.chr3 201967775 55 - 202621043 ggatgaatggatga-------------------------------------atg--------gatggagaaagagacagagagaga----aatagatttatttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735788 55 - 205426864 ggatgaatggatga-------------------------------------atg--------gatggagaaagagacagagagaga----aatagatttatttt i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030194 53 + 204787373 ------atggatga-------------------------------------atg--------gatggagaaagaggcagagagaaagataaatagatttatttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962042 53 - 192460366 ------atggatga-------------------------------------atg--------gatggagaaagaggcagagagaaagataaatagatttatttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074409 53 - 17224310 ------atggatga-------------------------------------atg--------gatggagaaagaggcagagagaaagataaatagatttatttt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386208 53 - 41321030 ------atggatga-------------------------------------atg--------gatggagaaagaggcagagagaaagataaatagatttatttt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459845 53 - 101219884 ------atggatga-------------------------------------atg--------gatggagaaagagacagagagaaagataaatagatttatttt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842079 53 - 924385 ------atggatga-------------------------------------atg--------gatggagaaagaggcagagagaaagataaatagatttatttt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685312 53 - 10587913 ------atggatga-------------------------------------atg--------gatggagaaagagacagagagaaagataaattgatttatttt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46009670 43 - 98464013 ----GAGTGGATAA---------------------------------------------------------AGAGACAGAGAAAGAGATAAATAGATTTATTTT i calJac3.chr15 I 2 I 2967 s saiBol1.JH378125 27695402 92 + 27742158 ----GAATGGATAAAagagacagagacagagacagagatagacacacatacaga--------gagagagagagagagagagagagagagaaatagatttatttt i saiBol1.JH378125 I 2 C 0 s cebCap1.NW_016107467v1 232834 45 - 4835464 ----gaatggataa-------------------------------------------------------agagacagagagagagagagaaatagatttatttt i cebCap1.NW_016107467v1 I 2 C 0 s aotNan1.NW_018502033v1 3689385 51 + 4093027 ----gaatggataa-------------------------------------------------agagacagagagagagagagagaaataaatagatttatttt i aotNan1.NW_018502033v1 I 2 C 0 s otoGar3.GL873534 11023854 4 + 30473821 ----------------------------------------------------------------------------------------------------tttt i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569587 65 + 58134056 gtgtgtatgtatat-------------------------------------gtaatatatatagtggggggagagaaggtgagaggaagaaa--gactaatttt i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e dasNov3.JH563077 1752331 0 - 2187301 C e nomLeu3.chr21 67552670 125 + 86207423 I a score=1278807.000000 s hg38.chrUn_KI270749v1 80185 160 + 158759 -aagaaattggcttatgtgattgtagaggctaggaagtcc-aaaatctgcaggatagaccagcaagctggagacccaggaaagaatgaatgttgcagctcaagtct-aaggcagtctgctgcc-agattccctcttcctcaggagagaaagatgttaggagagg s panTro5.chr3 201967830 160 - 202621043 -aagaaattggcttatgtgattgtggaggctagtaagtcc-aaaatctgcaggatagaccagcaagctggagacccaggaaagaatgaatgttgcagctcaagtct-aaggcagtctgctgcc-agattccctcttcctcaggagagaaagatgttaggagagg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204735843 160 - 205426864 -aagaaattggcttatgtgattgtggaggctagtaagtcc-aaaatctgcaggatagaccagcaagcttgagacccagcaaagaatgaatgttgcagctcaagtct-aaggcagtctgctgcc-agattccctcttcctcaggagagaaagatgttaggagagg i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030247 160 + 204787373 -aagaaattggtttatgtgagtgcggaggctagtaagtcc-aaaatctgcgggatagaccagcaaaccggagacccagggaagaatgaatgttgcagctcaagtct-aaggcagtctgctgcc-agattccctcttcctcaggagagaaagatgttaggagagg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962095 160 - 192460366 -aagaaattggtttatgtgagtgcggaggctagtaagtcc-aaaatctgcaggatagaccagcaaaccggagacccagggaagaatgaatgttgcagctcaagtct-aaggcagtctgctgcc-agattccctcttcctcaggagagaaagatgttaggagagg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074462 160 - 17224310 -aagaaattggtttatgtgagtgcggaggctagtaagtcc-aaaatctgcaggatagaccagcaaaccggagacccagggaagaatgaatgttgcagctcaagtct-aaggcagtctgctgcc-agattccctcttcctcaggagagaaagatgttaggagagg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386261 160 - 41321030 -aagaaattggtttatgtgagtgcggaggctagtaagtcc-aaaatctgcaggatagaccagcaagccggagacccagggaagaatgaatgttgcagctcaagtct-aaggcagtctgctgcc-aaattccctcttcctcaggagagaaagatgttaggagagg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64459898 153 - 101219884 -aagaaactggtttatgtgagtgtggaggctagtaag--------tctgcaggatagaccagcaagctggagacccaggaaagaatgaatgttgcagctcaagtct-aaggcagtctgctgcc-agattccctcttcctcaggagagaaagatgttaggagagg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842132 160 - 924385 -aagaaattggtttatgtgagtgcggaggctagtaagtcc-aaaatctgcaggatagaccagcaagccggagacccagggaagaatgaatgttgcagctcaagtct-aaggcagtctgctgcc-agattccctcttcctcaggagagaaagatgttaggacagg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685365 160 - 10587913 -aagaaattggtttatgtgagtgtggaggctagtaagtcc-aaaatctgcaggatagaccaacaagctggagacctaggaaagaatgaaggttgcagctcaggtct-aaggtagtctgctgcc-agattccctcttcctcaggagagaaagattttaggagagg i colAng1.NW_012114711v1 C 0 I 30 s calJac3.chr15 46012680 159 - 98464013 -aagaaTttggcctatgtgattgtggaggccggcaagtcc-aaaatt-gcaggataggccagcaagctggagacccaggaaagaacagatgttgcagctcgagtct-aagagagtctgctgct-agatttcctcttcttcaggagagaaagttgtcaggagaga i calJac3.chr15 I 2967 C 0 s saiBol1.JH378125 27695494 159 + 27742158 -aagaatttggcctatgtgattgtggaggctggcaagtcc-aaaatt-gcaggctagaccagcaagctggagacccaggaaagaacagatgttgtagctcaaatct-aagagagtctgctgcc-agatttcctcttcctcaggagagaaagatgtcaggagaga i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 232879 148 - 4835464 -aagaatttggcctatgtgattgtggaggctggcaagtcc-aaaatc-acaggatagaccagcaagct---------ggaaagaacagatgttgcagctcgagcct---gacagtctgctgcc-atatttcctccttctcaggagagaaatatatcaggagaga i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689436 159 + 4093027 -aagaatttggcctatgtgattgtggaggctggcaagttc-aaaatc-gcaggatagaccagcaagctggagacccaggaaagaacagatgttgcagctcaagtct-aagagagtctgctgcc-agatttcctcttcctgaagagagaaagatgtcaggagaga i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11023858 142 + 30473821 -ggtaaatgggttcatgtgactgtggaagctgataagtcc-aaaatctgcaaggaaggccagcaatttggaaacccagggaggaatcaatgctgcagcttgtgt-t-cagaggctgtgctggt-ggaactcc-ctccctcagtagaca---------------- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569652 148 + 58134056 aaggaatttatgccatgtgattgtgaaggctgacaagtccaaaaatcttcagggtcagcaggcaggaagggcacctagggaagagttaatgttgtggctcaagtccaaagactgtcgtctgtcaaaatttcttcttcctctagagaga---------------- i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e dasNov3.JH563077 1752331 0 - 2187301 C e nomLeu3.chr21 67552670 125 + 86207423 I a score=54230.000000 s hg38.chrUn_KI270749v1 80345 9 + 158759 tcagtc---------ttt s panTro5.chr3 201967990 9 - 202621043 tcagtc---------ttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736003 9 - 205426864 tcagtc---------ttt i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030407 9 + 204787373 tcagtc---------ttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962255 9 - 192460366 tcagtc---------ttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074622 9 - 17224310 tcagtc---------ttt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386421 9 - 41321030 tcagtc---------ttt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460051 5 - 101219884 tc-------------ttt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842292 18 - 924385 tcagtctttttttttttt i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46012839 9 - 98464013 tcagcc---------tct i calJac3.chr15 C 0 I 10 s saiBol1.JH378125 27695653 9 + 27742158 tcaggc---------ttt i saiBol1.JH378125 C 0 I 10 s cebCap1.NW_016107467v1 233027 9 - 4835464 tcagcc---------ttt i cebCap1.NW_016107467v1 C 0 I 20 s aotNan1.NW_018502033v1 3689595 9 + 4093027 tcagcc---------ttt i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11024000 9 + 30473821 tcagcc---------ttt i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569800 9 + 58134056 tctgtc---------tct i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e dasNov3.JH563077 1752331 0 - 2187301 C e colAng1.NW_012114711v1 6685525 30 - 10587913 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=6910.000000 s hg38.chrUn_KI270749v1 80354 2 + 158759 cc s panTro5.chr3 201967999 2 - 202621043 cc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736012 2 - 205426864 cc i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030416 2 + 204787373 tt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962264 2 - 192460366 tt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074631 2 - 17224310 tt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386430 2 - 41321030 tt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460056 2 - 101219884 tt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842310 2 - 924385 tt i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46012858 2 - 98464013 ct i calJac3.chr15 I 10 C 0 s saiBol1.JH378125 27695672 2 + 27742158 tt i saiBol1.JH378125 I 10 C 0 s aotNan1.NW_018502033v1 3689604 2 + 4093027 tt i aotNan1.NW_018502033v1 C 0 I 18 s otoGar3.GL873534 11024009 2 + 30473821 tc i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569809 2 + 58134056 tt i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e cebCap1.NW_016107467v1 233036 20 - 4835464 I e dasNov3.JH563077 1752331 0 - 2187301 C e colAng1.NW_012114711v1 6685525 30 - 10587913 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=-7428.000000 s hg38.chrUn_KI270749v1 80356 11 + 158759 atccccccacc s panTro5.chr3 201968001 11 - 202621043 atccccccacc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736014 11 - 205426864 atccccccacc i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030418 11 + 204787373 ttttttttttt i rheMac8.chr2 C 0 I 4 s macFas5.chr2 60962266 11 - 192460366 ttttttttttt i macFas5.chr2 C 0 I 4 s macNem1.NW_012018021v1 11074633 10 - 17224310 tttttttttt- i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17386432 11 - 41321030 ttttttttttt i cerAty1.NW_012009469v1 C 0 I 2 s chlSab2.chr22 64460058 11 - 101219884 ttttttttttt i chlSab2.chr22 C 0 I 4 s manLeu1.NW_012098965v1 842312 11 - 924385 ttttttttttt i manLeu1.NW_012098965v1 C 0 I 4 s calJac3.chr15 46012860 8 - 98464013 gttccctc--- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695674 8 + 27742158 gttccctc--- i saiBol1.JH378125 C 0 C 0 s otoGar3.GL873534 11024011 7 + 30473821 attccac---- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569811 4 + 58134056 -ttct------ i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e aotNan1.NW_018502033v1 3689606 18 + 4093027 I e cebCap1.NW_016107467v1 233036 20 - 4835464 I e dasNov3.JH563077 1752331 0 - 2187301 C e colAng1.NW_012114711v1 6685525 30 - 10587913 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=2104.000000 s hg38.chrUn_KI270749v1 80367 1 + 158759 a s panTro5.chr3 201968012 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736025 1 - 205426864 a i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030433 1 + 204787373 g i rheMac8.chr2 I 4 C 0 s macFas5.chr2 60962281 1 - 192460366 g i macFas5.chr2 I 4 C 0 s macNem1.NW_012018021v1 11074645 1 - 17224310 g i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17386445 1 - 41321030 a i cerAty1.NW_012009469v1 I 2 C 0 s chlSab2.chr22 64460073 1 - 101219884 a i chlSab2.chr22 I 4 C 0 s manLeu1.NW_012098965v1 842327 1 - 924385 a i manLeu1.NW_012098965v1 I 4 C 0 s colAng1.NW_012114711v1 6685555 1 - 10587913 a i colAng1.NW_012114711v1 I 30 C 0 s canFam3.chr20 16569815 1 + 58134056 a i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11024018 0 + 30473821 C e aotNan1.NW_018502033v1 3689606 18 + 4093027 I e cebCap1.NW_016107467v1 233036 20 - 4835464 I e dasNov3.JH563077 1752331 0 - 2187301 C e saiBol1.JH378125 27695682 0 + 27742158 C e calJac3.chr15 46012868 0 - 98464013 C e nomLeu3.chr21 67552670 125 + 86207423 I a score=558350.000000 s hg38.chrUn_KI270749v1 80368 66 + 158759 ttaagggcttcacctgatgaaatgaggcccacctagattatggaggttaatctgcttcactcaaag s panTro5.chr3 201968013 66 - 202621043 ttaagggcttcacctgatgaaatgaggcccacctagattatggaggttaatctgcttcactcaaag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736026 66 - 205426864 ttaagggcttcacctgatgaaatgaggcccacctagattatggaggttaatctgcttcactcaaag i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030434 66 + 204787373 ttaaggtcttcccgtgatgaaatgaggcccacctagattatggaggttaatctgcttcactcaaag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962282 66 - 192460366 ttaaggtcttcccgtgatgaaatgaggcccacctagattatggaggttaatctgcttcactcaaag i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074646 66 - 17224310 ttaaggtcttcccgtgatgaaatgaggcccacctagattatggaggttaatctgcttcactcaaag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386446 66 - 41321030 ttaaggtcttcctgtgatgaaatgaggcccacctagattttggaggttaatctgcttcactcaaag i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460074 66 - 101219884 ttaagatcttcccgtgatgaaatgaggcccacctagattatggaggttaatctgcttcactcaaag i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842328 66 - 924385 ttaaggtcttcccgtgatgaaatgaggcccgcctagattatggaggttaatctgcttcactcaaag i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685556 66 - 10587913 ttaaggtcttcccgtgatgaaatgaggcccacctagattatggaggttaatctacttcactcaaag i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46012868 59 - 98464013 ttaaggccttca-------acatgaggcccactcagataatggaggttaatctgcttcactcaaag i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695682 66 + 27742158 ttaaggccttcaactgatgacatgaggcccaaccagattatggaggttaatctgctgcactcaaag i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233056 66 - 4835464 taaaggccttcaactgatgacatgaggcccacccagattatggaggttaatctgcttcactcaaag i cebCap1.NW_016107467v1 I 20 C 0 s aotNan1.NW_018502033v1 3689624 66 + 4093027 ttaaggccttcaactgaggacatgaggcccacccagattatggaggttaacctgcttcactcgaag i aotNan1.NW_018502033v1 I 18 C 0 s otoGar3.GL873534 11024018 61 + 30473821 ttaaggccttcagctgattagatgaggtccatgcaaattgtggagggtgatcagctttact----- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16569816 66 + 58134056 tttagggtttcaactgattgaatgagacccacctacattctggagcataatatgttttattcagag i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e dasNov3.JH563077 1752331 0 - 2187301 C e nomLeu3.chr21 67552670 125 + 86207423 I a score=6685.000000 s hg38.chrUn_KI270749v1 80434 1 + 158759 g s panTro5.chr3 201968079 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736092 1 - 205426864 t i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030500 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962348 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074712 1 - 17224310 t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386512 1 - 41321030 t i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460140 1 - 101219884 t i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842394 1 - 924385 t i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685622 1 - 10587913 t i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46012927 1 - 98464013 t i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695748 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233122 1 - 4835464 t i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689690 1 + 4093027 t i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16569882 1 + 58134056 t i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e otoGar3.GL873534 11024079 0 + 30473821 C e dasNov3.JH563077 1752331 0 - 2187301 C e nomLeu3.chr21 67552670 125 + 86207423 I a score=708191.000000 s hg38.chrUn_KI270749v1 80435 81 + 158759 ctactaatttacatgttaatatcatctt-aaaaattccttcacagcagaattcaaaatagtgtttgaccaaatatctggacc-------- s panTro5.chr3 201968080 81 - 202621043 ctactaatttacatgttaatatcatctt-aacaattccttcacagcagaattcaaaatagtgtttgaccaaatatctggacc-------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736093 81 - 205426864 ctactaatttacatgttaatatcatctt-aacaattccttcacagcagaattcaaaatagtgtttgaccaaatatctggacc-------- i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030501 80 + 204787373 ctactaatttacatgttaatatcatctt--aaaattccttcacagcagaattcaaaatagtgtttgaccaaatatctggacC-------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962349 80 - 192460366 ctactaatttacatgttaatatcatctt--aaaattccttcacagcagaattcaaaatagtgtttgaccaaatatctggACC-------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074713 80 - 17224310 ctactaatttacatgttaatatcatctt--aaaattccttcacagcagaattcaaaatagtgtttgaccaaatatctggacC-------- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386513 80 - 41321030 ctactaatttacatgttaatatcatctt--aaaattccttcacagcagaattcaaaatagtgtttgaccaaatatctggacC-------- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460141 81 - 101219884 ctactaatttacatgttaatatcatctt-aaaaattccttcacagcagaattcaaaatagtgtttgaccaaatatctggACC-------- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842395 80 - 924385 ctactaatttacatgttaatatcatctt--aaaattccttcacagcagaattcaaaatagtgtttgaccaaatatctggACC-------- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685623 81 - 10587913 ctactaatgtacatgttaatatcatctt-aaaaattccttcaccgcagaaatcaaaatagtgtttgaccaaatatctggacC-------- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46012928 81 - 98464013 ctcctaatttacatgttaatgtcatctt-aaaaattccttcacagcagaattcagaatagtgtttgaccaaatatctgtacc-------- i calJac3.chr15 C 0 I 3 s saiBol1.JH378125 27695749 81 + 27742158 ctcctaatttacatgttaatgtcatctt-aaaagttccttcacagcagaattcagaatagtgtttgaccaaatatttggacc-------- i saiBol1.JH378125 C 0 I 3 s cebCap1.NW_016107467v1 233123 81 - 4835464 ctactaatttacatgttaatgtcatctt-aaaaattccttcacagcagaattcagaatagtgtttgacaaaatatctggacc-------- i cebCap1.NW_016107467v1 C 0 I 3 s aotNan1.NW_018502033v1 3689691 81 + 4093027 ccactaatttacatgttaatgtcatctt-aaaaattccttcacatcagaattcagaatagtgtttgaccaaatatctggacc-------- i aotNan1.NW_018502033v1 C 0 I 3 s otoGar3.GL873534 11024079 79 + 30473821 --gttaatttaaacagtaatgtaatcta-aaaaatactttcctgacaacagtcagactagtatttgaccaactacgtgggta-------- i otoGar3.GL873534 C 0 I 16 s canFam3.chr20 16569883 90 + 58134056 ctagtgatttcaatgttaatgtcatctaaaaaaatactttctcagtaacattcaggctagtgtttgaccaagtatttggctactgtggcc i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e dasNov3.JH563077 1752331 0 - 2187301 C e nomLeu3.chr21 67552670 125 + 86207423 I a score=174903.000000 s hg38.chrUn_KI270749v1 80516 22 + 158759 --------ttaacatgtaaaattaataatt s panTro5.chr3 201968161 22 - 202621043 --------ttaacatgtaaaattaataatt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736174 22 - 205426864 --------ttaacatgtaaaattaataatt i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030581 22 + 204787373 --------TTAACATGTAAAATTATTAATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962429 22 - 192460366 --------TTAACATGTAAAATTATTAATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074793 22 - 17224310 --------TTAACATGTAAAATTATTAATT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386593 22 - 41321030 --------TTAACATGTAAAATTATTAATT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460222 22 - 101219884 --------TTAACATGTAAAATTATTAATT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842475 22 - 924385 --------TTAACATGTAAAATTATTAATT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685704 22 - 10587913 --------TTAATGTGTAAAATTATTAATT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013012 22 - 98464013 --------ttaacatgcaaaattaatgatc i calJac3.chr15 I 3 C 0 s saiBol1.JH378125 27695833 22 + 27742158 --------ttaacatgcaaaagtaattatc i saiBol1.JH378125 I 3 C 0 s cebCap1.NW_016107467v1 233207 22 - 4835464 --------ttaacatgcaaaattaattatc i cebCap1.NW_016107467v1 I 3 C 0 s aotNan1.NW_018502033v1 3689775 22 + 4093027 --------ttaacatgcaaaattaattatc i aotNan1.NW_018502033v1 I 3 C 0 s otoGar3.GL873534 11024174 22 + 30473821 --------ttaacatacaaaatcagtcatc i otoGar3.GL873534 I 16 C 0 s mm10.chr6 45718613 22 - 149736546 --------TTGATAAGTGAAAGTCACCAGC i mm10.chr6 N 0 C 0 s canFam3.chr20 16569973 28 + 58134056 tagacaagatgacatg--aaattaactatc i canFam3.chr20 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e dasNov3.JH563077 1752331 0 - 2187301 C e nomLeu3.chr21 67552670 125 + 86207423 I a score=259122.000000 s hg38.chrUn_KI270749v1 80538 26 + 158759 acaGAGGGACAGATTATGGA-AGACAA s panTro5.chr3 201968183 26 - 202621043 acaGAGGGACAGATTATGGA-AGACAA i panTro5.chr3 C 0 I 4 s panPan2.chr3 204736196 26 - 205426864 acaGAGGGACAGATTATGGA-AGACAA i panPan2.chr3 C 0 I 4 s rheMac8.chr2 66030603 26 + 204787373 ACAGAGGGACAGGTTATGGA-AGACAA i rheMac8.chr2 C 0 I 4 s macFas5.chr2 60962451 26 - 192460366 ACAGAGGGACAGGTTATGGA-AGACAA i macFas5.chr2 C 0 I 4 s macNem1.NW_012018021v1 11074815 26 - 17224310 ACAGAGGGACAGGTTATGGA-AGACAA i macNem1.NW_012018021v1 C 0 I 4 s cerAty1.NW_012009469v1 17386615 26 - 41321030 ACAGAGGGACAGGTTATGGA-AGACAA i cerAty1.NW_012009469v1 C 0 I 4 s chlSab2.chr22 64460244 26 - 101219884 ACAGAGGGACAGGTTATGGA-AGACAA i chlSab2.chr22 C 0 I 4 s manLeu1.NW_012098965v1 842497 26 - 924385 ACAGAGGGACAGGTTATGGA-AGACAA i manLeu1.NW_012098965v1 C 0 I 4 s colAng1.NW_012114711v1 6685726 26 - 10587913 ACAGAGGGACAAGTTATGGA-AGACAA i colAng1.NW_012114711v1 C 0 I 4 s calJac3.chr15 46013034 26 - 98464013 acaGAGAGATAGATTACAGA-AGACAA i calJac3.chr15 C 0 I 7 s saiBol1.JH378125 27695855 26 + 27742158 acaGAAGGATAGATTACAGA-AGACAA i saiBol1.JH378125 C 0 I 18 s cebCap1.NW_016107467v1 233229 26 - 4835464 acaGAGGGATAGATTACAGA-AGACAA i cebCap1.NW_016107467v1 C 0 I 12 s aotNan1.NW_018502033v1 3689797 26 + 4093027 acaAAGGGATAGATTACAGA-AGACAA i aotNan1.NW_018502033v1 C 0 I 11 s otoGar3.GL873534 11024196 26 + 30473821 acTGAACAATAGATTATAGA-CGGCAA i otoGar3.GL873534 C 0 I 12 s mm10.chr6 45718635 27 - 149736546 ACAGAAAGATATATCATGGATAGAAAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16570001 26 + 58134056 acaAAAGCATAGACTATAGA-TAGCAA i canFam3.chr20 C 0 I 8 s dasNov3.JH563077 1752331 26 - 2187301 ATAGAAGGGTAGATTATGGG-TGGGCA i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE940204v1 2530304 0 - 2706325 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=248.000000 s hg38.chrUn_KI270749v1 80564 1 + 158759 -C s panTro5.chr3 201968213 1 - 202621043 -C i panTro5.chr3 I 4 C 0 s panPan2.chr3 204736226 1 - 205426864 -C i panPan2.chr3 I 4 C 0 s rheMac8.chr2 66030633 1 + 204787373 -C i rheMac8.chr2 I 4 C 0 s macFas5.chr2 60962481 1 - 192460366 -C i macFas5.chr2 I 4 C 0 s macNem1.NW_012018021v1 11074845 1 - 17224310 -C i macNem1.NW_012018021v1 I 4 C 0 s cerAty1.NW_012009469v1 17386645 1 - 41321030 -C i cerAty1.NW_012009469v1 I 4 C 0 s chlSab2.chr22 64460274 1 - 101219884 -C i chlSab2.chr22 I 4 C 0 s manLeu1.NW_012098965v1 842527 1 - 924385 -C i manLeu1.NW_012098965v1 I 4 C 0 s colAng1.NW_012114711v1 6685756 1 - 10587913 -C i colAng1.NW_012114711v1 I 4 C 0 s tarSyr2.KE939134v1 121172 1 + 958716 -C i tarSyr2.KE939134v1 I 945 C 0 s mm10.chr6 45718662 1 - 149736546 -T i mm10.chr6 C 0 I 4 s canFam3.chr20 16570035 1 + 58134056 -C i canFam3.chr20 I 8 I 2 s dasNov3.JH563077 1752357 1 - 2187301 A- i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e otoGar3.GL873534 11024222 12 + 30473821 I e aotNan1.NW_018502033v1 3689823 11 + 4093027 I e cebCap1.NW_016107467v1 233255 12 - 4835464 I e saiBol1.JH378125 27695881 18 + 27742158 I e calJac3.chr15 46013060 7 - 98464013 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=-23671.000000 s hg38.chrUn_KI270749v1 80565 5 + 158759 ACATT s panTro5.chr3 201968214 5 - 202621043 AAATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736227 5 - 205426864 AAATT i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030634 5 + 204787373 GATTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962482 5 - 192460366 AATTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074846 4 - 17224310 AA-TT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386646 5 - 41321030 AATTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460275 5 - 101219884 AATTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842528 5 - 924385 AATTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685757 4 - 10587913 AA-TT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013067 3 - 98464013 AAT-- i calJac3.chr15 I 7 C 0 s aotNan1.NW_018502033v1 3689834 2 + 4093027 AA--- i aotNan1.NW_018502033v1 I 11 I 5 s tarSyr2.KE939134v1 121173 4 + 958716 -GTTT i tarSyr2.KE939134v1 C 0 I 1 s otoGar3.GL873534 11024234 2 + 30473821 AG--- i otoGar3.GL873534 I 12 C 0 s mm10.chr6 45718667 2 - 149736546 AA--- i mm10.chr6 I 4 I 5 s canFam3.chr20 16570038 3 + 58134056 AAT-- i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1752358 1 - 2187301 A---- i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e cebCap1.NW_016107467v1 233255 12 - 4835464 I e saiBol1.JH378125 27695881 18 + 27742158 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=9555.000000 s hg38.chrUn_KI270749v1 80570 1 + 158759 T s panTro5.chr3 201968219 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736232 1 - 205426864 T i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030639 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962487 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074850 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386651 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460280 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842533 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685761 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013070 1 - 98464013 T i calJac3.chr15 C 0 C 0 s cebCap1.NW_016107467v1 233267 1 - 4835464 T i cebCap1.NW_016107467v1 I 12 C 0 s tarSyr2.KE939134v1 121178 1 + 958716 T i tarSyr2.KE939134v1 I 1 I 961 s otoGar3.GL873534 11024236 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16570041 1 + 58134056 T i canFam3.chr20 C 0 C 0 e mm10.chr6 45718669 5 - 149736546 I e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e aotNan1.NW_018502033v1 3689836 5 + 4093027 I e dasNov3.JH563077 1752359 0 - 2187301 C e saiBol1.JH378125 27695881 18 + 27742158 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=8281.000000 s hg38.chrUn_KI270749v1 80571 1 + 158759 T s panTro5.chr3 201968220 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736233 1 - 205426864 T i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030640 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962488 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074851 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386652 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460281 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842534 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685762 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013071 1 - 98464013 T i calJac3.chr15 C 0 I 3 s cebCap1.NW_016107467v1 233268 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 I 3 s otoGar3.GL873534 11024237 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16570042 1 + 58134056 T i canFam3.chr20 C 0 I 3 e mm10.chr6 45718669 5 - 149736546 I e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE939134v1 121179 961 + 958716 I e aotNan1.NW_018502033v1 3689836 5 + 4093027 I e dasNov3.JH563077 1752359 0 - 2187301 C e saiBol1.JH378125 27695881 18 + 27742158 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=1310.000000 s hg38.chrUn_KI270749v1 80572 5 + 158759 TTTTT s panTro5.chr3 201968221 5 - 202621043 TTTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736234 5 - 205426864 TTTGT i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030641 2 + 204787373 TT--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962489 2 - 192460366 TT--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074852 2 - 17224310 TT--- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386653 2 - 41321030 TT--- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460282 2 - 101219884 TT--- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842535 2 - 924385 TT--- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685763 2 - 10587913 TT--- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013075 2 - 98464013 GT--- i calJac3.chr15 I 3 C 0 s saiBol1.JH378125 27695899 2 + 27742158 TT--- i saiBol1.JH378125 I 18 C 0 s cebCap1.NW_016107467v1 233272 2 - 4835464 TT--- i cebCap1.NW_016107467v1 I 3 C 0 s aotNan1.NW_018502033v1 3689841 2 + 4093027 TT--- i aotNan1.NW_018502033v1 I 5 C 0 s otoGar3.GL873534 11024238 2 + 30473821 TT--- i otoGar3.GL873534 C 0 I 3 s mm10.chr6 45718674 2 - 149736546 TT--- i mm10.chr6 I 5 C 0 s canFam3.chr20 16570046 2 + 58134056 TT--- i canFam3.chr20 I 3 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69624636 462 + 202140232 I e tarSyr2.KE939134v1 121179 961 + 958716 I e dasNov3.JH563077 1752359 0 - 2187301 C e nomLeu3.chr21 67552670 125 + 86207423 I a score=3545.000000 s hg38.chrUn_KI270749v1 80577 1 + 158759 T s ponAbe2.chr3 69625098 1 + 202140232 T i ponAbe2.chr3 I 462 I 168 s rheMac8.chr2 66030643 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962491 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074854 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386655 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460284 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842537 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685765 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013077 1 - 98464013 C i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695901 1 + 27742158 C i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233274 1 - 4835464 C i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689843 1 + 4093027 C i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11024243 1 + 30473821 C i otoGar3.GL873534 I 3 C 0 s mm10.chr6 45718676 1 - 149736546 T i mm10.chr6 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e tarSyr2.KE939134v1 121179 961 + 958716 I e canFam3.chr20 16570048 0 + 58134056 C e dasNov3.JH563077 1752359 0 - 2187301 C e nomLeu3.chr21 67552670 125 + 86207423 I e panPan2.chr3 204736239 0 - 205426864 C e panTro5.chr3 201968226 0 - 202621043 C a score=285494.000000 s hg38.chrUn_KI270749v1 80578 34 + 158759 ACCAGGTAAAGAATTAGA---TTCATTAATTTTAGGT s panTro5.chr3 201968226 34 - 202621043 ACCAGGTAAAGAATTAGA---TTCATTAATTTTAGGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736239 34 - 205426864 ACCAGGTAAAGAATTAGA---TTCATTAATTTTAGGT i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66030644 34 + 204787373 AGCAGGTAAAGAATTAGG---TTTATTAATTTTAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962492 34 - 192460366 AGCAGGTAAAGAATTAGG---TTTATTAATTTTAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074855 34 - 17224310 AGCAGGTAAAGAATTAGG---TTTATTAATTTTAGAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386656 34 - 41321030 AGCAGGTAAAGAATTAGG---TTTATTAATTTTAGAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460285 34 - 101219884 AGCAGGTAAAGAATTAGG---TTTATTAATTTTAGGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842538 34 - 924385 AGCAGGTAAAGAATTAGG---TTTATTAATTTTAGAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685766 34 - 10587913 AGCAGGTAAAGAATTAGG---TTTATTAATTTTAGGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013078 30 - 98464013 ACCAAAT----AATTAGG---TTCCTGAATTTTAGAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695902 34 + 27742158 GCCAAGTAAAGAATTAGG---TTTCTGAATTTTAGAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233275 34 - 4835464 ACCAAGTAAAGAATTAGG---TTTCTGAATTTTAGAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689844 34 + 4093027 ACTGAGTAAAGAGTTAGG---TTTCTGAATTTTGGAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11024244 34 + 30473821 ACTAAGTGAAGAATTAGG---TTTATAGATTTTTAAG i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45718677 30 - 149736546 ACCAAGTAAAG----ATG---TTTGTGGACTTTCGGT i mm10.chr6 C 0 C 0 s canFam3.chr20 16570048 34 + 58134056 ACAAAGTATAGAACTAGG---TTTGTGAATTTTAGGT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752359 33 - 2187301 ---AAGCAAAGAAATATTTTCTTCATGAGTTTAAGA- i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69625099 168 + 202140232 I e tarSyr2.KE939134v1 121179 961 + 958716 I e nomLeu3.chr21 67552670 125 + 86207423 I a score=147942.000000 s hg38.chrUn_KI270749v1 80612 16 + 158759 AAACTGA----AATTATCCT s panTro5.chr3 201968260 16 - 202621043 AAACTGA----AATTATCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736273 16 - 205426864 AAACTGA----AATTATCCT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552795 16 + 86207423 AAACTGA----AATCATCCT i nomLeu3.chr21 I 125 C 0 s rheMac8.chr2 66030678 16 + 204787373 AAACTGA----AATTATCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962526 16 - 192460366 AAACTGA----AATTATCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074889 16 - 17224310 AAACTGA----AATTATCCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386690 16 - 41321030 AAACTGA----AATTATCCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460319 16 - 101219884 AAACTGA----AATTATCCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842572 16 - 924385 AAACTGA----AATTATCCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685800 16 - 10587913 AAACTGA----AATTATCCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013108 16 - 98464013 AAACCAA----AATTATCCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695936 16 + 27742158 AAACCAA----AATTATCCT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233309 16 - 4835464 AAACCAA----AATTATCCT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689878 16 + 4093027 AAACCAA----AATTATCCT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11024279 16 + 30473821 AACTCAT----AATTATTCT i otoGar3.GL873534 I 1 I 1 s mm10.chr6 45718707 17 - 149736546 -AACTCACAGCAAATATG-- i mm10.chr6 C 0 C 0 s canFam3.chr20 16570082 16 + 58134056 AATCCAT----AGTTAGTAT i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1752392 16 - 2187301 AAGCCCA----AAGAACCTA i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69625099 168 + 202140232 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=122826.000000 s hg38.chrUn_KI270749v1 80628 8 + 158759 AAATTACT s panTro5.chr3 201968276 8 - 202621043 AAATTACT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736289 8 - 205426864 AAATTACT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552811 8 + 86207423 AAATTAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66030694 8 + 204787373 AAATTACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962542 8 - 192460366 AAATTACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074905 8 - 17224310 AAATTACT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386706 8 - 41321030 AAATTACT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460335 8 - 101219884 AAATTACT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842588 8 - 924385 AAATTACT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685816 8 - 10587913 AAATTACT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013124 6 - 98464013 --GTTACT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695952 8 + 27742158 AAGTTACT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233325 8 - 4835464 AAGTTACT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689894 8 + 4093027 AAGTTACT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 557579 8 + 2414909 AAATTATT i proCoq1.NW_012148064v1 N 0 C 0 s eulMac1.LGHX01002907v1 463794 8 - 469914 AAATTATT i eulMac1.LGHX01002907v1 N 0 C 0 s eulFla1.LGHW01002937v1 467048 8 - 473781 AAATTATT i eulFla1.LGHW01002937v1 N 0 C 0 s otoGar3.GL873534 11024296 8 + 30473821 GAATTATT i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45718724 8 - 149736546 AACTTATT i mm10.chr6 C 0 C 0 s canFam3.chr20 16570099 7 + 58134056 -AAATATT i canFam3.chr20 I 1 I 1 s dasNov3.JH563077 1752408 8 - 2187301 AAATTGTT i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1590174 806 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69625099 168 + 202140232 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=959310.000000 s hg38.chrUn_KI270749v1 80636 66 + 158759 TTTAATTCAAACCAAAACACAAGGAGAGATAATGTAGAATTGTCT-TGCAAACAGTGTCAAAATCAT s panTro5.chr3 201968284 66 - 202621043 TTTAATTCAAACCAAAAGACAAGGAGAGATAATGTAGAATTGTCT-TGCAAACAGTGTCAAAATCAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736297 66 - 205426864 TTTAATTCAAACCAAAAGACAAGGAGAGATAATGTAGAATTGTCT-TGCAAACAGTGTCAAAATCAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552819 66 + 86207423 TTTAATTCAAATCAAAAGAAAAGGAGAGATAATGTAGAATTGTCT-TGCAAACAGTGCCAAAATCAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66030702 61 + 204787373 TTTAATTCAAATCAAAAGACGAGGAGAGATAATGTAGAA-----T-TGTAAACAGCGTCAAAATCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962550 61 - 192460366 TTTAATTCAAATCAAAAGACGAGGAGAGATAATGTAGAA-----T-TGTAAACAGTGTCAAAATCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074913 61 - 17224310 TTTAATTCAAATCAAAAGACGAGGAGAGATAATGTAGAA-----T-TGTAAACAGTGTCAAAATCAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386714 61 - 41321030 TTTAATTCAAATCAAAAGACGAGGAGAGATAATGTAGAA-----T-TGTAAACAGTGTCAAAATCAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460343 61 - 101219884 TTTAATTCAAATCAAAAGATGAGGAGAGAGAATGTAGAA-----T-TGTAAACAGTGTCAAAATCAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842596 61 - 924385 TTTAATTCAAATCAAAAGACGAGGAGAGATAATGTAGAA-----T-TGTAAACAGTGTCAAAATCAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685824 66 - 10587913 TTTAATTCAAATCAAAAGACGAGGATAGACAATGTAGAATTGTCT-TGTAAACAGTGTCAAAATCAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013130 61 - 98464013 TTTAATT-----CAAAATAGAAGAAGAGATAAAGTAAACTTGTCT-TATAAACAGTGTCAAAATCAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27695960 61 + 27742158 TTTAATT-----CAAAAGAGAAAGAGAGATAAAGTAGAATTGTCT-TGTAAACAATGTCAAAATCAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233333 61 - 4835464 TTTAATT-----CAAAAGAGAAGGAGAGATAAAGTAGAATTGTCT-TGTAAACAATGTCAAAATCAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689902 61 + 4093027 TTTAATT-----CAAAAGAGAAGGAGAGATAAAGTAGAATTGTCT-TGTAAACAATGTCAAAATCAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1590980 66 - 9149476 TTTAATTAAAATTAAAACAGAAGGAAAGATAAAGTAGAATTGTCT-TATAAATAGTGGCAAAATCAT i micMur3.chr32 I 806 C 0 s proCoq1.NW_012148064v1 557587 66 + 2414909 TTTAATTAAAATTAAAACAGAAGGAAAGATAAAGTAGAATTGTCT-TATAAATAGTGGCAAAATCAT i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01002907v1 463802 66 - 469914 TTTAATTAAAATTAAAACAGAAGGAAATATAAAGTAGAATTGTCT-TATAAATAGTGGCAAAATCAT i eulMac1.LGHX01002907v1 C 0 N 0 s eulFla1.LGHW01002937v1 467056 66 - 473781 TTTAATTAAAATTAAAACAGAAGGAAATATAAAGTAGAATTGTCT-TATAAATAGTGGCAAAATCAT i eulFla1.LGHW01002937v1 C 0 N 0 s otoGar3.GL873534 11024304 66 + 30473821 TTTAATAAAAAGTAAGACAGAAGGAAAGATAAAGTGGAATCCTTT-TATAAATAGTGTCAAAATCAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45718732 66 - 149736546 CTTGGTTCAAATCAGAAGAGAAGGCAAAA-AAGGCAGAATCATTTCCACAAAGAGTGGTAACATCTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16570107 66 + 58134056 TTTAATTCAAATCAAAATAGAAGGAAATAGAAAATAAAATCATCT-TGTAAACAATGCCAAAACCAA i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1752416 65 - 2187301 TTTGATTCAACTCAAAAG-GAAGAAAAGATAAAGTAGATTCACCT-TGAAAATGGTGGCAAAATCAT i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69625099 168 + 202140232 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=315648.000000 s hg38.chrUn_KI270749v1 80702 20 + 158759 GCAAAACTGAGGAGACTCAA s panTro5.chr3 201968350 20 - 202621043 GCAAAACTGAGGAGACTCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736363 20 - 205426864 GCAAAACTGAGGAGACTCAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552885 20 + 86207423 GCAAAACCGAGGAGACTCAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66030763 20 + 204787373 GTAAAACTGAGGAGACTCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962611 20 - 192460366 GTAAAACTGAGGAGACTCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074974 20 - 17224310 GTAAAACTGAGGAGACTCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386775 20 - 41321030 GTAAAACTGAGGAGACTCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460404 20 - 101219884 GTAAAACTGAGGAGACTCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842657 20 - 924385 GTAAAACTGAGGAGACTCAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685890 20 - 10587913 GTAAAACTGAGGGGACTCAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013191 20 - 98464013 ATAAAACTGAGGAGACACAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696021 20 + 27742158 ATAAAACTAAAGAGACTCAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233394 20 - 4835464 ATAAAACTGAGGAGACTCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689963 20 + 4093027 ATAAAACTGAGGAGACTCAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1591046 20 - 9149476 TTAAAACTGAGGACACTCAA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 557653 20 + 2414909 TTAAAACTGAGGACACTCAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11024370 20 + 30473821 GTAAAACTTAGGAGACTCAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45718798 20 - 149736546 GTAAAACTGAGGATACTTAG i mm10.chr6 C 0 C 0 s canFam3.chr20 16570173 20 + 58134056 GTAAACCTGAAAAGACTCAG i canFam3.chr20 C 0 I 1328 s dasNov3.JH563077 1752481 20 - 2187301 GTAAAACTGAAGAGAAGCAA i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69625099 168 + 202140232 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=10430.000000 s hg38.chrUn_KI270749v1 80722 1 + 158759 G s panTro5.chr3 201968370 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736383 1 - 205426864 G i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552905 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66030783 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962631 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074994 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386795 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460424 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842677 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685910 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013211 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696041 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233414 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689983 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1591066 1 - 9149476 G i micMur3.chr32 C 0 I 48 s proCoq1.NW_012148064v1 557673 1 + 2414909 G i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11024390 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45718818 1 - 149736546 G i mm10.chr6 C 0 I 3 s canFam3.chr20 16571521 1 + 58134056 g i canFam3.chr20 I 1328 C 0 s dasNov3.JH563077 1752501 1 - 2187301 G i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69625099 168 + 202140232 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=33773.000000 s hg38.chrUn_KI270749v1 80723 13 + 158759 GAATT--AAAAAAAT s panTro5.chr3 201968371 13 - 202621043 GAATT--AAAAAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736384 13 - 205426864 GAATT--AAAAAAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552906 15 + 86207423 GAATTAAAAAAAAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66030784 13 + 204787373 GAATC--aaaaaaat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962632 13 - 192460366 GAATT--GAAAAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11074995 13 - 17224310 GAATT--AAAAAAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386796 13 - 41321030 GTATT--aaaaaaat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460425 13 - 101219884 GAATT--aaaaaaat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842678 13 - 924385 GAATT--aaaaaaat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685911 12 - 10587913 GAATT--aaaaaaa- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013212 13 - 98464013 AAATT--AAacacaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696042 13 + 27742158 AAATT--AAacacac i saiBol1.JH378125 C 0 I 36 s cebCap1.NW_016107467v1 233415 13 - 4835464 AAATT--AAacacac i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3689984 13 + 4093027 AAATT--AATcacac i aotNan1.NW_018502033v1 C 0 I 16 s proCoq1.NW_012148064v1 557674 2 + 2414909 ----------GA--- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11024391 5 + 30473821 -------AAAAA--- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45718822 12 - 149736546 AAAAT--AAAAACA- i mm10.chr6 I 3 C 0 s canFam3.chr20 16571522 9 + 58134056 gaatt--taaa---- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752502 3 - 2187301 GAA------------ i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1591067 48 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69625099 168 + 202140232 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=-44252.000000 s hg38.chrUn_KI270749v1 80736 8 + 158759 TTTAAAA-A s panTro5.chr3 201968384 8 - 202621043 TAAAAAA-A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736397 8 - 205426864 TAAAAAA-A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552921 8 + 86207423 TTTAAAA-A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66030797 9 + 204787373 taaaaaatt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60962645 9 - 192460366 TAAAAAATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075008 8 - 17224310 TAAAAAA-T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17386809 8 - 41321030 aaaaaaa-t i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460438 5 - 101219884 taaaa---- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 842691 8 - 924385 aaaaaaa-t i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6685923 7 - 10587913 -aaaaaa-c i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013225 6 - 98464013 -cacaca-- i calJac3.chr15 C 0 I 17 s cebCap1.NW_016107467v1 233428 3 - 4835464 ----aca-- i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3690013 7 + 4093027 acacaca-- i aotNan1.NW_018502033v1 I 16 I 1 s proCoq1.NW_012148064v1 557676 5 + 2414909 --AAAAA-- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11024396 5 + 30473821 --AAAAA-- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45718834 2 - 149736546 ----AC--- i mm10.chr6 C 0 C 0 s canFam3.chr20 16571531 7 + 58134056 ttaaaaA-- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752505 2 - 2187301 ---AA---- i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1591067 48 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69625099 168 + 202140232 I e tarSyr2.KE939134v1 121179 961 + 958716 I e saiBol1.JH378125 27696055 36 + 27742158 I a score=1779.000000 s hg38.chrUn_KI270749v1 80744 2 + 158759 AA s panTro5.chr3 201968392 2 - 202621043 AA i panTro5.chr3 C 0 I 1 s panPan2.chr3 204736405 2 - 205426864 AC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552929 2 + 86207423 GC i nomLeu3.chr21 C 0 I 1 s rheMac8.chr2 66030806 2 + 204787373 aa i rheMac8.chr2 C 0 I 6 s macFas5.chr2 60962654 2 - 192460366 TT i macFas5.chr2 C 0 I 6 s macNem1.NW_012018021v1 11075016 2 - 17224310 TT i macNem1.NW_012018021v1 C 0 I 6 s cerAty1.NW_012009469v1 17386817 2 - 41321030 aa i cerAty1.NW_012009469v1 C 0 I 6 s chlSab2.chr22 64460443 2 - 101219884 aa i chlSab2.chr22 C 0 I 6 s manLeu1.NW_012098965v1 842699 2 - 924385 aa i manLeu1.NW_012098965v1 C 0 I 6 s colAng1.NW_012114711v1 6685930 2 - 10587913 aa i colAng1.NW_012114711v1 C 0 I 2 s calJac3.chr15 46013248 2 - 98464013 ac i calJac3.chr15 I 17 C 0 s saiBol1.JH378125 27696091 2 + 27742158 at i saiBol1.JH378125 I 36 C 0 s cebCap1.NW_016107467v1 233432 2 - 4835464 ac i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3690021 2 + 4093027 ac i aotNan1.NW_018502033v1 I 1 C 0 s proCoq1.NW_012148064v1 557681 2 + 2414909 AA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11024401 2 + 30473821 AA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45718836 2 - 149736546 AA i mm10.chr6 C 0 C 0 s canFam3.chr20 16571538 2 + 58134056 AA i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1752507 2 - 2187301 AT i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1591067 48 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e ponAbe2.chr3 69625099 168 + 202140232 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=21021.000000 s hg38.chrUn_KI270749v1 80746 1 + 158759 A s panTro5.chr3 201968395 1 - 202621043 A i panTro5.chr3 I 1 C 0 s panPan2.chr3 204736407 1 - 205426864 A i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69625267 1 + 202140232 a i ponAbe2.chr3 I 168 I 3721 s nomLeu3.chr21 67552932 1 + 86207423 A i nomLeu3.chr21 I 1 C 0 s rheMac8.chr2 66030814 1 + 204787373 a i rheMac8.chr2 I 6 I 2 s macFas5.chr2 60962662 1 - 192460366 A i macFas5.chr2 I 6 I 2 s macNem1.NW_012018021v1 11075024 1 - 17224310 A i macNem1.NW_012018021v1 I 6 I 2 s cerAty1.NW_012009469v1 17386825 1 - 41321030 a i cerAty1.NW_012009469v1 I 6 I 2 s chlSab2.chr22 64460451 1 - 101219884 a i chlSab2.chr22 I 6 I 2 s manLeu1.NW_012098965v1 842707 1 - 924385 a i manLeu1.NW_012098965v1 I 6 I 2 s nasLar1.chr2 57693572 1 + 181502896 a i nasLar1.chr2 N 0 I 10567 s colAng1.NW_012114711v1 6685934 1 - 10587913 a i colAng1.NW_012114711v1 I 2 I 6 s rhiBie1.NW_016820128v1 1198160 1 - 2311269 a i rhiBie1.NW_016820128v1 N 0 I 10514 s calJac3.chr15 46013250 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696093 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233434 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3690023 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 557683 1 + 2414909 A i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11024403 1 + 30473821 A i otoGar3.GL873534 C 0 I 3 s mm10.chr6 45718838 1 - 149736546 A i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1752509 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1591067 48 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e tarSyr2.KE939134v1 121179 961 + 958716 I e canFam3.chr20 16571540 1 + 58134056 I a score=345808.000000 s hg38.chrUn_KI270749v1 80747 38 + 158759 TACTAGGCAAGAATTAGCAGTTTACTTTCTGGACTATG s panTro5.chr3 201968396 38 - 202621043 TACTAGGCAAGAATTAGCAGTTTACTTTCTGGACTATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736408 38 - 205426864 TACTAGGCAAGAATTAGCAGTTTACTTTCTGGACTATG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552933 38 + 86207423 TACTAGGCAAGAATTACCAGTTTACTTTCTGGACTATG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66030817 37 + 204787373 TACTGGACAAGAATTATCAGTTCAC-TTCTGGACTATG i rheMac8.chr2 I 2 C 0 s macFas5.chr2 60962665 37 - 192460366 TACTGGACAAGAATTATCAGTTCAC-TTCTGGACTATG i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11075027 37 - 17224310 TACTGGACAAGAATTATCAGTTCAC-TTCTGGACTATG i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17386828 37 - 41321030 TACTGGACAAGAATTACCAGTTCAC-TTCTGGACTATG i cerAty1.NW_012009469v1 I 2 C 0 s chlSab2.chr22 64460454 37 - 101219884 TATTGAACAAGAATTACCAGTTCAC-TTCTGGACTATG i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 842710 37 - 924385 TACTGGACAAGAATTACCAGTTCAC-TTCTGGACTATG i manLeu1.NW_012098965v1 I 2 C 0 s colAng1.NW_012114711v1 6685941 37 - 10587913 TACTGGGCAAGAATTACCAGTTCAC-TTCTGGACTATG i colAng1.NW_012114711v1 I 6 C 0 s calJac3.chr15 46013251 38 - 98464013 cacacGGCAAGAATTACCCATGTGCTTTCTAGATTATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696094 38 + 27742158 tacaTGGCAAGAATTACCAGTTTGCTTTCTGGACTATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233435 38 - 4835464 cacacGGCAAGAATTACCAGTTTGCTTTCTGGACTATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3690024 38 + 4093027 cacacGGCAAGAATTACCAGTTTGCTTTCTGGACTATA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 557684 35 + 2414909 CACTGGACAATAATTACTAGCTTGCTTTCTG---TATA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11024407 37 + 30473821 CACAGGACAATAATTAC-AACTTGCTTTCCAGGCCATA i otoGar3.GL873534 I 3 C 0 s mm10.chr6 45718839 35 - 149736546 CACT-GGTGATAATTAACATTT--CTTTCTAGATCCTA i mm10.chr6 C 0 C 0 s canFam3.chr20 16571541 23 + 58134056 TACTGG---------------CTACTTTCTAGATCGTA i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1752510 38 - 2187301 CACTGGGCAATAACTGCCAGTTTACTTCCTGGATCATA i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1591067 48 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=5499598.000000 s hg38.chrUn_KI270749v1 80785 350 + 158759 AGCCTAAACTTTCTTTCTTATCTATATAAATATTACCTAAATCTCCATT-TTTCTCTGCCTTAGCATTCTTAGACATAGTGTCACTGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGATAACATGAAT-CTCAAATATC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTGTATCCTCAGTGGGATTTTCTTT-CTGAAAAACGCTGAAAGTCTATTATAAAGTGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGTCCATAACTACCTAGTGATCCAATGCGAAGTATGGTGTTATTACAG-AAAACTCACATCCTCTTGC s panTro5.chr3 201968434 350 - 202621043 AGCCTAAACTTTCTTTCTTATCTATATAAATATTGCCTAAATCTCCATT-TTTCTCTGCCTTAGCATTCGTAGACACAGTGTCACTGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGATAACATGAAT-CTCAAATATC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTGTATCCTCAGTGAGATTTTCTTT-CTGAAAAACGCTGAAAGTCTATTATAAAGTGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGTCCATAACTACCTAGTGATCCAACGCGAAGTATAGTGTTATTACAG-AAAACTCACATCCTCTTGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736446 350 - 205426864 AGCCTAAACTTTCTTTCTTATCTATATAAATATTACCTAAATCTCCATT-TTTCTCTGCCTTAGCATTCGTAGACACAGTGTCACTGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGATAACATGAAT-CTCAAATATC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTGTATCCTCAGTGGGATTTTCTTT-CTGAAAAACGCTGAAAGTCTATTATAAAGTGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGTCCATAACTACCTAGTGATCCAACGCGAAGTATGGTGTTATTACAG-AAAACTCACATCCTCTTGC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67552971 350 + 86207423 AGCCTAAACTTTCTTTCTTATCTATATAAATATTACCTAAATCTCCATT-TTTCTCTGCCTTAGCATTCTTAGATATAGTGTCACTGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGATAACATGAAT-CTCAAATACC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATCAACTTTATATCCTCAGTGGAATTTTCTTT-CTGAAAAACACTGAAAGTCTATTATAAAGTGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTGGTCCATAACTACCTAGTGATCCAACACGAAGTATGATGTTATTACAG-AAAACTCACATCCTCTTGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66030854 350 + 204787373 AGCTTAAAATTTCTTTCTTCTCTGTATAAATATTACCTAAATCTCCATT-TTTCTCCACCTTAGCATTCTTAGACATAGTGTCACAGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGGTAACATGGAT-CTCAAATATC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTGTATCCTCAGTGGGATTTTCTTT-CTGAAAAACACTGAAAGTCTATTATAAAGCATGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATCCAACGTGAAGTGTGATGTTATTACAG-AAAATTCACATCCTCTTGT i rheMac8.chr2 C 0 I 3 s macFas5.chr2 60962702 350 - 192460366 AGCTTAAAATTTCTTTCTTCTCTGTATAAATATTACCTAAATCTCCATT-TTTCTCCACCTTAGCATTCTTAGACATAGTGTCACAGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGGTAACATGGAT-CTCAAATATC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTGTATCCTCAGTGGGATTTTCTTT-CTGAAAAACACTGAAAGTCTATTATAAAGCATGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATCCAACGTGAAGTGTGATGTTATTACAG-AAAATTCACATCCTCTTGT i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11075064 350 - 17224310 AGCTTAAAATTTCTTTCTTCTCTGTATAAATATTACCTAAATCTCCATT-TTTCTCCACCTTAGCATTCTTAGACATAGTGTCACAGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGGTAACATGGAT-CTCAAATATC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTGTATCCTCAGTGGGATTTTCTTT-CTGAAAAACACTGAAAGTCTATTATAAAGCATGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATCCAACGTGAAGTGTGATGTTATTACAG-AAAATTCACATCCTCTTGT i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17386865 350 - 41321030 AGCTTAAAATTTCTTTCTTCTCTGTATAAATATTACCTAAATCTCCATT-TTTCTCCACCTTAGCATTCTTAGACATAGTGTCACTGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGGTAACATGAAT-CTCAAATATC---AGCAGACTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTGTATCCTCAGTGGGATTTTCTTT-CTGAAAAACACTGAAAGTCTATTATAAAGCGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATCCAACGTGAAATGTGATGTTATTACAG-AAAATTCACATCCTCTTGC i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64460491 350 - 101219884 AGCTAAAAATTTCTTTCTTCTCTGTATAAATATTACCTAAATCTCCATT-TTTCTCCACCTTAGCATTCTTAGACATAGTGTCACTGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGATAACATGAAT-CTCAAATATC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTGTATCCTCGGTGGGATTTTCTTT-CTGGAAAACACTGAAAGTCTATTATAAAGCGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATCCAACGTGAAGTGTGATGTTATTACAG-AAAATTCACATCCTCTTGC i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 842747 350 - 924385 AGCTTAAAATTTCTTTCTTCTCTGTATAAATATTACCTAAATCTCCATT-TTTGTCCACCTTAGCATTCTTAGACATAGTGTCACTGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGGTAACATGAAT-CTCAAATATC---AGCAGACTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTGTATCCTCAGTGGGATTTTCTTT-CTGAAAAACACTGAAAGTCTATTATAAAGCGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATGCAACGTGAAGTGTGATGTTATTACAG-AAAATTCACATCCTCTTGC i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6685978 350 - 10587913 AGCTTAAAATTTCTTTCTTCTCTGTATAAATATTACCTAAATCTCCATT-TTTCTCTGCCTTAGCATTCTTAGACATAGTATCACTGTCACAT---------AGAGCAAAGCACTTTAAGTTTTCCTGCAGGTAACATGAAT-CTCAAATAGC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTGTATCCTCAGTGGGATTTTCTTT-CTGAAAAACACTGAAAGTCTATTATAAAGCGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATCCAACGTGAAGTGTGATGTTATTACAG-AAAATTCACATCCTCTTGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013289 349 - 98464013 AACTTAAACTTTCTTTCTTATTTGTGATAATATTACCTAAATCTCCA-T-TTTCTCTGCCTTAGCATTCTTAGACATAGTGTCACTGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGAAAACATGAAT-CTCAAATATC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTCTATCCTCAGTGGGATTTTCTTT-CTGAAAAACACTGAAAGTCTATTATAAAGCGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCCTAACTACCTAGTGATCCAATGTGAGGTATGATGTTATTACAG-AAAACTCACATCCTCTTGC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696132 345 + 27742158 AGCTTAA----CCTTTCTTATTTGTGATAATATTACCTAAATTTCCA-T-TCTCTCTGCCTTAGCATTCTTAGACATAGTGTCACTGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCGGAAAACATGAAT-CTCAAATATC---AGCAGAGTATCATCTTTATTGTGACGTGTTACAGTCA-AAGAAAAATATAAACTTTCTATCCTCAGTGGGATTTTCTTT-CTGAAAAACAATGAAAGTCTATTATAAAGCGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATCCAATGTGAGGTATGATGTTATTACAG-AAAACTCACATCCTCTTGC i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 233473 349 - 4835464 AGCTTAAACTTACATTCTTATTTGTGATAATATTACCTAAATCTCCA-T-TTTCTCTGCCCTAGCATTCTTAGACATAGTGTCACTGTCACAT---------AGAACAAAACGCTTTAAGTTTTCCTGCAGAAAACATGAAT-CTCAAATATC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTCTATCCTCCGTGGGATTTTCTTT-CTGAAAAACACTGAAAGTCTATTATAAAGCGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATCCAACGTGAGGTATGATGTTATTACAG-AAAACTCACATCCTCTTGC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3690062 349 + 4093027 AGCTTAAACTTTCTTTCTTATTTGTGATAATATTACCTAAATCTCCA-T-TTACTCTGCCTTAGCATTCTTAGACATAGTGTCACTGTCACAT---------AGAACAAAACACTTTAAGTTTTCCTGCAGAAAACATGAAT-CTCAAATATC---AGCAGAGTATCATCTTTATTGTGATGTGTTACAGTCA-AAGAAAAATATAAACTTTCTATCCTCAGTGGGATTTTCTTT-CTGAAAAATGCTGAAAGTCTATTATAAAGTGTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATCCAACGTGAGGTATGATGTTATTACAG-AAAACTCACATCCTCTTGC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1591115 358 - 9149476 AGCTTAAACTTTCTTTCATACTTGCACAAATGTTACCTAAATCTTAATT-TCTCTCTGCCTTGGCATTTCTAGACATAGTGTCACTGCCATATGAAAAAAAAAAAACAAAACACTTT--GTTTCCCTGCAGAAAACATGAAT-CCCAAATATC---AGCAGAATATCATCTTTATTGTGATGTGTTATAGTCA-AAGAAAAATATAAACTTTCTATCCTCCATGGGATTTTCTTC-CTGCAAAACACTGAAAGTCTATTATAAAGCTTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATCCAACGCAAGGTATGATGTTATTATAGAAAAACTCACATCCTCTTGC i micMur3.chr32 I 48 C 0 s proCoq1.NW_012148064v1 557719 347 + 2414909 AGCTTAAACTTTCTTTCATATTTGCATAAATGTCACCTAAATCTTAATT-TTCCTCTGCCTTAGCATCCCTAGACATAGTGTCACTGCCAT-----------GGAAGAAAACACTTT--GCTTTCCTGCAGAAAACGTGAAT-CCCAAATATC---AGCAGAATATCATCTTTATTGTGATGTGTTATAGTCA-AAGAAAAATATAAACTCTCTATCCTCTGTGAGATTTTCTTC-CTGAGAAACACTGAAAGTCTATTATAAAGCTTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTAGCCCATAACTACCTAGTGATCCAACGCAAGGTATGATGTTATTATAGAAAAACTCACATCCTCTTGC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11024444 348 + 30473821 AGCTTAAACTGTCTTTCATATTTGTATCAATGTTACGCAAATCCCAATG-TCCCCCTGCCTTAGCATTCTGAGTCTTAGTATCACCCACATAT---------AAAAGAAAATGCTTC--ATTTTTCTGCTGAAAACATGAATCCCCAAATATC---AGCAGAATATCATCTTTATTGTGATGTGCTATAGTCA-AAG-AAAATATAAACTTTCTATCCTCAGTGGGATTTTCTTC-CTGAAAAACACTGAAAGTCTATTATAGAGCTTGTCAT-AAAAATCTCTCCCTTAGCCCGAGATTAGCCCATAACTACCTAGTGATCCAGCACGAGGTATGAGGTTGTTATAG-AAAACTCACATCCTCTTGC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45718874 354 - 149736546 AGTTTCAATTTCCTTTATTCTTTGTGTAAATGTTGTCTGAGTGCCAA-T-TTCCCCTGCCTTTGCATTTCTAGACATAATGTCACTGTTATCA---------AGAACAAAACGCTTTAAGTCTTACCATACAAAACATGAAT-CTCAACTATCAAGAAAAAAAAATCATCCTTATTGTGATGTGTTACAGTCACAGGAAAAATATAAACTCTTTATCCTGGATTGCATTTTTTTTCCTGAGAAGCACTGAATGTCCATGATAAAACTTGTCGCAAAAAATCTTTCCCTCAGTCCTAGATTAGCACCTAACTACCTAGTGATCCAGCACAAGTCAGAATGTTATTATAG-AAAGCACACATTCTCTCC- i mm10.chr6 C 0 I 1 s canFam3.chr20 16571564 346 + 58134056 AGCTTAAAAAAT-TTTCCTATTTGTGTAAATATTGCTTAAATGCCAGTTGTCTCTTTGCCTTAACATTCATAGAC--AGTATCATTGTCATAC---------AGAACAAAACATTTAAAGTTTTCTTGCAGAAAACATGAAT-CTTAAATATC---AGCAGAATATCATTTTTATTGTGATGTGTTATAGTCAAAAGAAAAATACAAACTTTCTATACTCAGTGGGATTTTCTTC-CTGAAAAACACTGAAAGTCTATTATAAAGCTTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTATCCTATAACTACCTAGTGATCCAATGCGAGGTATGA---TATTATAG-AAAACTCACATCCTCCTGC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752548 345 - 2187301 GGCTTAAATTCTCTGTCCCATCTGTGTAAATATTACCTAAATACCACTC-TCTGCCTGCCTTAACATTTTTAGCGACAGTGTCACTGTCATAT---------AGAACAAAACATTT--AGTTTTCCTGCCCAAAACATGAAT-CTCAAATATC---GGCAGAATATC-TCTTTATTGTGA--TGTTATAGTCA-AAGAAAAATATAAACTTTCTTCCCATAGAGGGATTTTCTTC-CTGAAAAACACTGAGAGCCTATTATAAAGTTTGTCAT-AAAAATCTCTCCCTCAGCCCTAGATTATCCCACAACTATCTAGTGATCCAATGCGAGATATGATGTTATTATAG-AAGGCTCATGTCTTCTTGC i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=80186.000000 s hg38.chrUn_KI270749v1 81135 7 + 158759 AAAA--------------GAA s panTro5.chr3 201968784 7 - 202621043 AAAA--------------GAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736796 7 - 205426864 AAAA--------------GAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553321 7 + 86207423 AAAA--------------GAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031207 7 + 204787373 AAAA--------------AAA i rheMac8.chr2 I 3 C 0 s macFas5.chr2 60963054 7 - 192460366 AAAA--------------AAA i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11075416 7 - 17224310 AAAA--------------AAA i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17387218 7 - 41321030 AAAA--------------AAA i cerAty1.NW_012009469v1 I 3 C 0 s papAnu3.chr2 59523073 7 + 187378091 aaaa--------------aaa i papAnu3.chr2 N 0 I 10447 s chlSab2.chr22 64460842 7 - 101219884 AAAA--------------AAA i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 843100 7 - 924385 AAAA--------------AAA i manLeu1.NW_012098965v1 I 3 C 0 s colAng1.NW_012114711v1 6686328 7 - 10587913 AAAA--------------AAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013638 7 - 98464013 AAAA--------------AAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696478 7 + 27742158 AAAA--------------AAA i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 233822 7 - 4835464 AAAA--------------AAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3690411 7 + 4093027 AAAA--------------AAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1591473 21 - 9149476 aaaaaataaaaaaaaaagaaa i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 558066 8 + 2414909 AAAAA-------------AAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11024792 7 + 30473821 AAAA--------------AAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45719229 6 - 149736546 GAAA--------------AA- i mm10.chr6 I 1 C 0 s canFam3.chr20 16571910 6 + 58134056 AAAA--------------AA- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752893 6 - 2187301 AAAA--------------AA- i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=2509840.000000 s hg38.chrUn_KI270749v1 81142 154 + 158759 GAAATCTCAGTAAGACCTAAAGGAATAACAGGGGTCTTATTTCACATTTGTTCTTTTCTAGAAGAAGATGAGAGCTATCTTAGACTCATGCAGGTTCTCAAATATAAACCAATCTCTCAAAGAATTCCCAGCACTTCTGAGTGCAATATAACTT s panTro5.chr3 201968791 154 - 202621043 GAAATCTCAGTAAGACCTAAAGAAATAATAGGGGTCTTATTTCACATTTGTTCTTTTCTAGAAGAAGATGAGAGCCATCTTAGACTCATGCAGGTTCTCAAATATAAACCAATCTCTCAAAGAATTTCCAACACTTCTGAGTGCAATATAACTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736803 154 - 205426864 GAAATATCAGTAAGACCTAAAGAAATAATAGGGGTCTTATTTCATATTTGTTCTTTTCTAGAAGAAGATGAGAGCCATCTTAGACTCACGCAGGTTCTCAAATATAAACCAATCTCTCAAAGAATTTCCAACACTTCTGAGTGCAATATAACTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553328 153 + 86207423 GAAATATCAGTAAGACCTAAAGAAATAATAGAGGTCTTATTTCACATTTGTCCTTTTCTAGAAGAAGATGAGGGCCATCTTAGACTCATTCAGGTTCTCAAATATAAACCAATCTCTTACAGAATTTCCAACACTTCTGAGTG-AATATAACTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031214 154 + 204787373 GGAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTCTTTCACATTTGTTCTTTTCTAGAAGAAGATGAGGGCCATCTTAGACTCATTCAAGTTCTCAAATATAAACCAATCTCTCAAAGAATTTCCAACACTTCTGAGTGCAATGTAACTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60963061 154 - 192460366 GGAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTCTTTCACATTTGTTCTTTTCTAGAAGAAGATGAGGGCCATCTTAGACTCATTCAAGTTCTCAAATATAAACCAATCTCTCAAAGAATTTCCAACACTTCTGAGTGCAATGTAACTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075423 154 - 17224310 GGAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTCTTTCACATTTGTTCTTTTCTAGAAGAAGATGAGGGCCATCTTAGACTCATTCAAGTTCTCAAATATAAACCAATCTCTCAAAGAATTTCCAACACTTCTGAGTGCAATGTAACTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17387225 154 - 41321030 GGAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTATTTCACATCTGTTCTTTTCTAGAAGAAGATGAGGGCCATCTTAGACTCATTCAAGTTCTCAAATATAAACCAATCTCTCAAAGAATTTCCAACACTTCTGAGTGCAATGTAACTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64460849 154 - 101219884 GGAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTATTTCACATCTGTTCTTTTCTAGAAGAAGATGAGGGCCATCTTAGACTCATTCAAGTTCTCAAATATAAACCAATCTCTCAAAGAATTTCCAACACTTCTGAGTGCAATGTAACTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 843107 154 - 924385 GGAATCTCAGTAAGACCTAAAGAAATAATAGACGTCTTATTTCACATCTGTTCTTTTCTAGAAGAAGATGAGGGCCATCTTAGACTCATTCAAGTTCTCAAATATAAACCAATTTCTCAAAGAATTTCCAACACTTCTGAGTGCAACGTAACTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6686335 154 - 10587913 GGAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTATTTCACATTTGTTCTTTTCTAGAAGAAGATGAGGGCCATCTTAGACTCATTCAAGTTCTCAAATATAAACCAATCTCTCAAAGAATTTCCAACACTTCTGAATGCAATGTAACTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013645 154 - 98464013 GAAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTATTTCACATTTGTTCTTTTCTAGAAGAAGATAAGGTCCGTCTTAGACTCATTCAAGTTCTCAAATATAAACCAACCTCTCAAAGAATTTCCAACACTTCTGAGTGCAATATAACTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696485 154 + 27742158 GAAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTATTTCACATTTGTTCTTTTCTAGAAGAAGATAAGGTCCATCTTACACTCATTCAAGTTCTCAAATATGAACCAATCTCTCAAAGAATTTCCAACACTTCTGAGTGCAATATAACTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233829 154 - 4835464 GAAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTATTTCACATTTGTTCTTTTCTAGAAGAAGATAAGGTCCATCTTAGACTCATTCAAGTTCTCAAATATAAACCAATATCTCAAAGAATTTCCAACACTTCTGAGTGCAATATAATTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3690418 154 + 4093027 GAAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTATTTCACATTTGTTCTTTTCTAGAAGAAGATAAGGTCCATCTTAGACTCATTCAAGTTCTCAAATATAAACCAATCTCTCAAACAATTTCCAACACTTCTGAGTGCAGTATAACTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1591494 151 - 9149476 gaaaTCTCGGTAAGACCTAAAGAAATAATAGAGGTCTTATTTCACATTTTTCCTTTTCC---AGAAGATGAGAGCCACCTTAGACTCATTCAAGTTCTCGAATATAAACCAATTTGTCAAAGAATTTCCAACACTTTTGAGTGGAATATAGCTT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 558074 150 + 2414909 GAAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTATTTCACATTTTTCCTTTTCT---AGAAGATGAGGGCCATCTTAGACTCATTGAAGTTCTCAAATATAAACCAATTTGTCAAAGAATTTCCAACAC-TTTGAGTGGAATATAGCTT i proCoq1.NW_012148064v1 C 0 I 222 s otoGar3.GL873534 11024799 151 + 30473821 GAAATCTCAGTCAGACCCAAAGAAATAACAGAGGTCTTATTTCACATTTGTCCTTTTCT---AGAAGATGAGGGCCATCTTAGACTCATTCAAGTTCTCAACTATAAACCAATTTGTCAAAGAATTTTCAACAATTTTGAGGGGAATATAGCTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45719235 149 - 149736546 GAAATCTCAGTGAGACATAGA-AAATAATAGAGGTCGTATTTCACACTGGCTTCTTTCT---CCACAACGAGTGTCGTCTTAGACTTATTCAGGTTCTCAAATATGAAACAATTTATCAATGAAATTCCAATTATTTT-AGTAGAAAGTAGCAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16571916 154 + 58134056 GAAATCTCAGTAAGACCTAAAGAAATAATAGTGCTCTTATTTCATATTTGTCCTTTTCTAGAAGAAGATGAAGGCTATCTTAGACTCATTCAAGGTCTCAAATATAAACCAATTTGTCAAAGAATTTCTAACACTTCTAAGTGGAATGTAGCTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1752899 154 - 2187301 GAAATCTCAGTAAGACCTAAAGAAATAATAGAGGTCTTATTTCACATTTGTCCTTTTCTAGGAGAAGATGAGGGCCATCTTAGAATCATTCAAGTTCTCAAATATAAGCCAATTTGTCAAAGAATCTCCAACACTTCTGAGTGGAAAGTAGCTT i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=1214919.000000 s hg38.chrUn_KI270749v1 81296 110 + 158759 ACCGGTGTCACA-------------------------------------------------------------------CACACACTTCAATATTATA-T-----ATTTT---TAGGACCTC-TCCATAAAAGAACTCATCCTGATGCCT------TTTTACCATG---TTAATATTCAA--TATTGTTAACTCAGAA s panTro5.chr3 201968945 110 - 202621043 ACCTGTGTCACA-------------------------------------------------------------------CACACACTTCAATATTATA-T-----ATTTT---TAGGACCTC-TCCATAAAAGAACTCATCCTGATGCCT------TTTTACCATG---TTAGTATTCAA--TATTGTTAACTCAGAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204736957 110 - 205426864 ACCTGTGTCACA-------------------------------------------------------------------CACACACTTCAATATTATA-T-----ATTTT---TAGGACCTC-TCCATAAAAGAACTCATCCTGATGCCT------TTTTACCATG---TTAATATTCAG--TATTGTTAACTCAGAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553481 110 + 86207423 ACCTGTGTCACA-------------------------------------------------------------------CACACATTTCAATATTATC-T-----ATTTT---TAAGACCTC-TCCATAAAAGAACTCATCCTGATGCCT------TTTTACTGTG---TTAATATTCAA--TATTGTTAACTCAGAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031368 110 + 204787373 ACCTGTGTCACA-------------------------------------------------------------------CAGACACTTCAATATTATA-T-----ATTTT---TAGGACCTC-TCCATAAAAGAACTCATCCTGATGCCT------TTTTACTGTG---TTAATATTCAA--TATTATCAACTCTGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60963215 110 - 192460366 ACCTGTGTCACA-------------------------------------------------------------------CAGACACTTCAATATTATA-T-----ATTTT---TAGGACCTC-TCCATAAAAGAACTCATCCTGATGCCT------TTTTACTGTG---TTAATATTCAA--TATTATCAACTCTGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075577 110 - 17224310 ACCTGTGTCACA-------------------------------------------------------------------CAGACACTTCAATATTATA-T-----ATTTT---TAGGACCTC-TCCATAAAAGAACTCATCCTGATGCCT------TTTTACTGTG---TTAATATTCAA--TATTATCAACTCTGAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17387379 110 - 41321030 ACCTGTGTCACA-------------------------------------------------------------------CAGACACTTCAATATTATA-T-----ATTTT---TAGGACCTC-TCCATAGAAGAACTCATCCTGATGCCT------TTTTACTGTG---TTAATATTCAA--TATTATCAACTCTGAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64461003 110 - 101219884 GCCTGTGTCACA-------------------------------------------------------------------CAGACACTTCAATATTATA-T-----ATTTT---TAGGACCTC-TCCATAAAAGAACTCATCCTGATGCCT------TTTTACTATG---TTAATATTCAA--TATTATCAACTCAGAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 843261 110 - 924385 ACCTGTGTCACA-------------------------------------------------------------------CAGACACTTCAATATTATA-T-----ATTTT---TAGGACCTC-TCCATAGAAGAACTCATCCTGATGCCT------TTTTACTGTG---TTAATATTCAA--TATTATCAACTCTGAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6686489 110 - 10587913 ACCTGTGTCACA-------------------------------------------------------------------CAGACACTTCAATATTATA-T-----ATTTT---TAGGACCTC-TCCATAAAAGAACTCATCCTGATGCCT------TTTTACTGTG---TTAATATTCAA--TATTATCAACTCAGAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013799 114 - 98464013 ACCTGGGTCACA-------------------------------------------------------------------CAAACACTTCAGTATTATA-T-----ATTTT---TAGAACCTCTTTCATAAAAGAACTTATCCTCATGCCT------TTTTACCATGTTATTATTATTCAA--TATTGTCAACTCAAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696639 107 + 27742158 ACCTGGGTCACA-------------------------------------------------------------------CAAACACTTCAGTATTATA-T-----ATTTT---TAGGACCTC-TTCAAAAAAGAACTCATCCTGATGCCT------TTTTACCATG------TTATTCAA--TACTGTCAACTCAAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 233983 110 - 4835464 ACCTGGGTCACA-------------------------------------------------------------------CAAACACTTCAGTATTATA-T-----ATTTT---TAGGAACTC-TTCATAAAAGAACTCATCCTGATGCCT------TTTCACCATG---TTATTATTCAA--TGTTGTCAACTCAAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3690572 177 + 4093027 ACCTGGGTCACACAAACACTTCAGTATTATAGATTTTTAGGACCTCTTCATAAAAGAACTCATCCTGATGCCTTTTTACCAAACACTTCAGTATTATA-G-----ATTTT---TAGGACCTC-TTCATAAAAGAACTCATCCTGATGCCT------TTTTACCACG---TTATTATTCAA--TATTGTCAACTCAAAA i aotNan1.NW_018502033v1 C 0 I 2155 s micMur3.chr32 1591645 119 - 9149476 CTCTGGGTCACA-------------------------------------------------------------------CAAACACTTCAGTATTATA-T-----TTTTTTTGTTTGTCTTC-TCAATGAAAGAACTCACCCTGATGCTTTTATTTTTTTGCCATG---TTATTATTCAA--TATTGTCAATTCGGCA i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11024950 104 + 30473821 CTATGGGTCACC-------------------------------------------------------------------CAAACACTTTAGTATTATA-T-----ATTTTCT-CAGATACAC-TCCATAAAAGAACTCACTC--------------TTTTCTCGTG---TTATCATTCAA--TATTGTCAATTCGGCA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45719384 89 - 149736546 CTGTGGGTTACT-------------------------------------------------------------------CAAACACTTCAGAATTCTT-T-----TTTTCC--CAGAACTTC-TCAATTAAAAAGTGCTCTCTGACATAT------TTTTA--------TCATTCTCCA------------------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16572070 113 + 58134056 CTCTGGGTCACC-------------------------------------------------------------------CAAACACTTCAGTATTATA-TTTTCATTTTT---CGGAACCTC-TCAAT-AAAGAACTCAGCCTGATGCTC------TTTTACCATC---TTATTGTTCAA--TATTGTC-ACTCAGTA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1753053 111 - 2187301 CTTTGTATCACC-------------------------------------------------------------------CAGATACTTCACTATTATAGT-----TTCTT---CAATGCCTC-TTAATAAAGGGGCTCACCCTGATGCCT--------TTACCATC---TCATTATTCCAATGATTGTCAACTCGGAA i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 558224 222 + 2414909 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=594211.000000 s hg38.chrUn_KI270749v1 81406 55 + 158759 GTATTTGGTTTTATAGTAAAGTCTTGTCTGA--TTAATGAGGTAATTATTTACTTTT s panTro5.chr3 201969055 54 - 202621043 GTATTTGGTTTTATAGTAAAGTCTTGTCTGA--TTAATAAGGTAGTTATTTA-TTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204737067 54 - 205426864 GTATTTGGTTTTATAGTAAAGTCTTGTCTGA--TTAATAAGGTAGTTATTTA-TTTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553591 55 + 86207423 GTATTTGGTTTTATAGCAAAGTCTTGTCTGA--TTAATAAGGTAATTATTTACTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031478 55 + 204787373 GTATTTGATTTTATAGTAAAGTCTTGTCTGA--TTAATAAGGTAATTATTTACTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60963325 55 - 192460366 GTATTTGATTTTATAGTAAAGTCTTGTCTGA--TTAATAAGGTAATTATTTACTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075687 55 - 17224310 GTATTTGATTTTATAGTAAAGTCTTGTCTGA--TTAATAAGGTAATTATTTACTTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17387489 55 - 41321030 GTATTTGGTTTTATAGTAAAGTCTTGTCTGA--TTAATAAGGTAATTATTTACTTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64461113 55 - 101219884 GTATTTGGTTTTATAGTAAAGTCTTGTCTGA--TTAATAAGGTAATTATCTACTTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 843371 55 - 924385 GTATTTGGTTTTATAGTAAAGTCTTGTCTGA--TTAATAAGGTAATTATTTACTTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6686599 55 - 10587913 GTATTTGGTTTTATAATAAAGTCTTGTCTGA--TTAATAAGGTAATTATTTACTTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013913 55 - 98464013 GTATTTCATTTTGTAATAAAGTCTTGTCTGG--GTAATAAGGTATTTATCTACATTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696746 55 + 27742158 GTATTTCATTTTGTAATAAAGTCTTGTCTAG--GTAATAAGGTATTTATCTACATTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 234093 55 - 4835464 GTATTTCGTTTTGTAATAAAGTCTTGTCTGG--GTAATAAGATATTTATCTACATTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3692904 55 + 4093027 GTATTTCGTTTTGTAATAAAGTCTTGTCTAG--GTAATAAGGTATTTATCTACATTT i aotNan1.NW_018502033v1 I 2155 C 0 s micMur3.chr32 1591764 57 - 9149476 GTACTTGACATTATAGCAAAGTCTTGCCTGATATTAATAAGGCAATTATCTACTTTT i micMur3.chr32 C 0 I 51 s otoGar3.GL873534 11025054 57 + 30473821 ATGTTTGGCATTATAGCAAAGTCTTGTCTGATGTTAAGAAGGCAGTTATCTATGTTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45719473 39 - 149736546 ----------------TGGGGTCTTGACTAA--TTTGTATTGAAAGTATCTACACTT i mm10.chr6 C 0 I 2 s canFam3.chr20 16572183 55 + 58134056 ATATTTGCTGTTATAGAAAGTTCTAGTCTGG--TTAAAAAGGCAATTATTGACATTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1753164 40 - 2187301 ATTTTTGCTATGGCAG-----------------TTTATTAAGCAATTATTTATATAT i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 558224 222 + 2414909 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=436424.000000 s hg38.chrUn_KI270749v1 81461 49 + 158759 ATATACTT-AAAAATACTCTGACTTCTTTACTATCTTTAAAGG-TCAGAT-A s panTro5.chr3 201969109 50 - 202621043 ACATACTTAAAAAATATTCTGACTCCTTTACTATCTTTAAAGG-TCAGAT-A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204737121 50 - 205426864 ACATACTTAAAAAATATTCTGACTCCTTTACTATCTTTAAAGG-TCGGAT-A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553646 50 + 86207423 ATATACTTAAAAAATATTCTGACTTCTTTACTATCTTTAAAGG-TCAGAT-A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031533 50 + 204787373 ATATACTTAAAAAATATTCTGACTTCTTTACTATCTTTAAAGG-TAGGAT-G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60963380 50 - 192460366 ATATACTTAAAAAATATTCTGACTTCTTTACTATCTTTAAAGG-TAGGAT-G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075742 50 - 17224310 ATATACTTAAAAAATATTCTGACTTCTTTACTATCTTTAAAGG-TAGGAT-G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17387544 50 - 41321030 ATATACTTAAAACATATTCTGACTTCTTTACTATCTTTAAAGG-TAGGAT-G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64461168 50 - 101219884 ATATACTTAAAAAATATTCTGACTTCCTTACTATCTTTAAAGG-TAGGAT-G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 843426 50 - 924385 ATATACTTAAAACATATTCTGACTTCTTTACTATCTTTAAAGG-TAGGAT-G i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6686654 49 - 10587913 ATATACTTAAAA-ATATTCTGACTTCTTTACTATCTTTAAAGG-TAGGAT-G i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46013968 51 - 98464013 ATATACTTTCAAAATATTCTGACTGCTTTATTATCTTTAAAGG-CCAGATAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696801 50 + 27742158 ATATACTTTCAAAATATTCTGACTGCTTTATTATCTTTAAAGG-CAAGAT-A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 234148 41 - 4835464 ATATACTTTCAAAATATTCTGACTG---------CTTTAAAGT-CCAGAT-A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3692959 50 + 4093027 ATATACTTTCAAAATATTCTGACTGCTTTATTATCTTTAAAGG-CCAGAT-A i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11025111 49 + 30473821 ATATGCTTTTTAAATATTCTGGCTTACATATGTTCTTTAAGGG-CAGGGT-- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45719514 49 - 149736546 GTATAGTTTTCA-ATATTCAGGCTTGTTTATAAGGTTGGAATG-CAGGAT-G i mm10.chr6 I 2 C 0 s canFam3.chr20 16572238 48 + 58134056 ATATGATTTTTA-ACATTCTGACTTGCATACTGTATTTAAGGA-TTGGAT-- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1753204 47 - 2187301 --TTGTTTTTA--ACATTCTGATTTGTATACTCTCTTTCAAGGACTAGAT-A i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 558224 222 + 2414909 I e micMur3.chr32 1591821 51 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=632120.000000 s hg38.chrUn_KI270749v1 81510 43 + 158759 AAAATGCTGGAAATTTG-AAAATGTGGGTGGATATAATAAAGCA s panTro5.chr3 201969159 43 - 202621043 AAAATGCTGGAAATTTG-AAAATGTGGGTGGATATAATAAAGCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204737171 43 - 205426864 AAAATGCTGGAAATTTG-AAAATGTGGGTGGATATAATAAAGCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553696 43 + 86207423 AAAATGCTGGAAATTTG-AAAATGTGGGTGGATATAATAAAGCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031583 43 + 204787373 AAAATGCTGGAAATTTG-AAAATGTGTGTGAATATAATAAAGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60963430 43 - 192460366 AAAATGCTGGAAATTTG-AAAATGTGTGTGAATATAATAAAGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075792 43 - 17224310 AAAATGCTGGAAATTTG-AAAATGTGTGTGAATATAATAAAGCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17387594 43 - 41321030 AAAATGCTGGAAATTTG-AAAATGTGTGTGAATATAATAAAGCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64461218 43 - 101219884 AAAATGCTGGAAATTTG-AAAATGTGTGTGAATATAATAAAGCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 843476 43 - 924385 AAAATGCTGGAAATTTG-AAAATGTGTGTGAATATAATAAAGCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6686703 43 - 10587913 AAAATGCTGGAAGTTTG-AAAATGTGTGTGAATATAATACAGCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46014019 43 - 98464013 AAAATGCTTGAAATTTG-AAAATGTGGGTGGATGTAATAAAGTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696851 43 + 27742158 AAAATGCTTGAAATTTG-AAAATGTGGGTGGATATAATAAAGTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 234189 43 - 4835464 AAAATGCTTGAAATTTG-AAAATGTGGGTGGATATAATAAAGTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3693009 43 + 4093027 AAAATGCTTGAAATTTG-AAAATGTGAGTGGATATAATAAAATA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1591872 43 - 9149476 AAAGTGCTTGAAATTTG-AAAATGTCAATGGATATGATAAAGCA i micMur3.chr32 I 51 C 0 s proCoq1.NW_012148064v1 558446 43 + 2414909 AAAATGCTTGAAATTTG-AAAATGTGAATGGATATGATAAAGCA i proCoq1.NW_012148064v1 I 222 C 0 s otoGar3.GL873534 11025160 43 + 30473821 AAAATACTTGAAGTTTG-AAAATGTGAGAGGATATAATAAAGCA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45719563 41 - 149736546 AAAATACTTTGGTTTTA-CAAATGGGAGTGGAAATGAT--GGCA i mm10.chr6 C 0 I 2 s canFam3.chr20 16572286 42 + 58134056 AAAATGCTTGAAATTT--AACATGTGGGTGGATATGATAAAGCA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1753251 41 - 2187301 -AAATG--AGAAATTTGTACCATGTGGGCAAATATGATAAAGCA i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 121179 961 + 958716 I a score=72012.000000 s hg38.chrUn_KI270749v1 81553 5 + 158759 GGTTT- s panTro5.chr3 201969202 5 - 202621043 GGCTT- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204737214 5 - 205426864 GGCTT- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553739 5 + 86207423 GGTTT- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031626 5 + 204787373 GGTTT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60963473 5 - 192460366 GGTTT- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075835 5 - 17224310 GGTTT- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17387637 5 - 41321030 GGTTT- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64461261 5 - 101219884 GGTTT- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 843519 5 - 924385 GGTTT- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6686746 5 - 10587913 GGTTT- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46014062 5 - 98464013 AGTTT- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696894 5 + 27742158 GGTAT- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 234232 5 - 4835464 GGTTT- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3693052 5 + 4093027 GGTTT- i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 122140 4 + 958716 -ATTT- i tarSyr2.KE939134v1 I 961 I 10219 s micMur3.chr32 1591915 5 - 9149476 GGTTT- i micMur3.chr32 C 0 I 4156 s proCoq1.NW_012148064v1 558489 5 + 2414909 GGTTT- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11025203 5 + 30473821 GTTTT- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45719606 5 - 149736546 TGTTT- i mm10.chr6 I 2 C 0 s canFam3.chr20 16572328 5 + 58134056 GGTTT- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1753292 5 - 2187301 -GTTTT i dasNov3.JH563077 C 0 I 2390 e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I a score=13365.000000 s hg38.chrUn_KI270749v1 81558 1 + 158759 A s panTro5.chr3 201969207 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204737219 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553744 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031631 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60963478 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075840 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17387642 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64461266 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 843524 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6686751 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46014067 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696899 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 234237 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3693057 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 558494 1 + 2414909 A i proCoq1.NW_012148064v1 C 0 I 7689 s otoGar3.GL873534 11025208 1 + 30473821 G i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45719611 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16572333 1 + 58134056 A i canFam3.chr20 C 0 C 0 e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=21165.000000 s hg38.chrUn_KI270749v1 81559 3 + 158759 GGT s panTro5.chr3 201969208 3 - 202621043 GGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204737220 3 - 205426864 GGT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553745 3 + 86207423 GCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031632 3 + 204787373 GCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60963479 3 - 192460366 GCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075841 3 - 17224310 GCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17387643 3 - 41321030 GCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64461267 3 - 101219884 GCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 843525 3 - 924385 GCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6686752 3 - 10587913 GCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46014068 3 - 98464013 GCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696900 3 + 27742158 GCT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 234238 3 - 4835464 GCT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3693058 3 + 4093027 GCT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11025209 3 + 30473821 TTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45719612 3 - 149736546 AAT i mm10.chr6 C 0 I 6595 s canFam3.chr20 16572334 3 + 58134056 TCT i canFam3.chr20 C 0 C 0 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=36256.000000 s hg38.chrUn_KI270749v1 81562 3 + 158759 TTC s panTro5.chr3 201969211 3 - 202621043 TTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204737223 3 - 205426864 TTC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553748 3 + 86207423 TTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031635 3 + 204787373 TTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60963482 3 - 192460366 TTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075844 3 - 17224310 TTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17387646 3 - 41321030 TTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64461270 3 - 101219884 TTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 843528 3 - 924385 TTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6686755 3 - 10587913 TTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46014071 3 - 98464013 TTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696903 3 + 27742158 TTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 234241 3 - 4835464 TTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3693061 3 + 4093027 TTC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11025212 3 + 30473821 TTC i otoGar3.GL873534 C 0 I 6082 s canFam3.chr20 16572337 3 + 58134056 TTT i canFam3.chr20 C 0 C 0 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e mm10.chr6 45719615 6595 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=10920.000000 s hg38.chrUn_KI270749v1 81565 1 + 158759 T s panTro5.chr3 201969214 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204737226 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553751 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031638 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60963485 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075847 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17387649 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64461273 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 843531 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6686758 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46014074 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696906 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 234244 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3693064 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16572340 1 + 58134056 T i canFam3.chr20 C 0 I 4290 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e mm10.chr6 45719615 6595 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e otoGar3.GL873534 11025215 6082 + 30473821 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=6666671.000000 s hg38.chrUn_KI270749v1 81566 810 + 158759 GCACTATCCAGACAGGAGTCCACATGTGTTGCTCTGGGTTCCCATGGTAACTTAAATGGAAACTTTCACAATGTCGAgagtccttgatgtcctgcaaatgaaggagGAGGATGCCCTCTAGTTCCTAGTAGCTGGAACCTGC-TAGGTGGCACCAACCCTTCCAAATGGAACAGTACATCTATAAAAGGAAAACTGATGACATCTACATCCTAAATCTGAAGAGGACCTGGGAGAAGCTTCTGCTGACAGCTTATGCCATTGTTGCCCTTGAAAACTCTGCTGATGTCAATGTCAGGTCATCCAGGAATCCTGGCCAGTGGGCTGTGCTGAAGTTCGCTTCTGCCACTGGAGGTACTCCTATTGCTGGTCACTTCACT--------ACTGAAATCCTCACTAACCAGATCCAGGCAGCCTTCTGGAAGCCACGGCTTCTGGTTACTGATCTCAGGGCTGACCATCAGCCTCTCACGGAAGCATCTTTTGTTAAGCTGACTATCATTACTCTATGAAGCACATATTCTTCTCTGTGCTGTGTGGACATTTTCATCCCACGCAGCAAAAATGTAGCTCACTTAGTGGGTTTGATGTGGTGGATGAtggtatgagttggctgtgtccccacccaaatctcatgttgaattgtacttcccataatccacacatgtcatgggaggaacccagtgggagataattgaatt-ggggggaggtttcccatgtcttgttctcctgatagtgagtggtgcttttt----cc------------------ccttttgctcggcacttctccttgccgctgccatgtgaataaggatgtgcttacttcaccttc s panTro5.chr3 201969215 809 - 202621043 GCACTATCCAGACAGGAGTCCACATGTGTTGCTCTGGGTTCCCATGGTAACTTAAATGGAAACTTTCACAATGTCAGGAGTCCATGATGTCCTGCAAATGAATGAGGAGGATGCCCTCTAGTTCCTAGTAGCTGGAACCTGC-TAGGTGGCACCAACCCTTCCAAATGGAACAGTACATCTATAAAAGGAAAACTGACGGCATCTACATCCTAAATCTGAAGAGGACCCGGGAGAAGCTTCTGCTGACAGCTTATGCCATTGTTGCCCTTGAAAACCCTGCTGATGTCAATGTCAGGTCGTCCAGGAATCCTGGCCAGTGGGCTGTGCTGAAGTTCGCTGCTGCCACTGGAGCTACTCCTATTGCTGGTCACTTCACT--------ACTGAAATGCTCACTAACCAGATCCAGGCAGCCTTCTGGAAGCCACGGCTTCTGGTTACTGATCTCAGGGCTGACCATCAGCCTCTCACAGAAGCATCTTGTGTTAACCTGACTATCATTACTCTATGAAGCACATATTCTTCTCTGTGCTGTGTGGACATTTTCATCCCATGCAGCAAAAATGTAGCTCACTTAGTGGGTTTGATGTGGTGGATGCtgatatgagttggctgtgtccccacccaaatctcctgttgaattgtagttcccataacc--cacatgtcatgggaggaacccagtgggagataatcgaatcaggggggaggtttcccatgtcctgttctcctgatagtgagtggtgcttttt----cc------------------ccttttgctcggcacttctccttgctgctgccatgtgaataaggatgtgcttccttcaccttc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204737227 809 - 205426864 GCACTATCCAGACAGGAGTCCACATGTGTTGCTCTGGGTTCCCATGGTAACTTAAATGGAAACTTTCACAATGTCGGGAGTCCATGATGTCCTGCAAATGAATGAGGAGGATGCCCTCTAGTTCCTAGTAGCTGGAACCTGC-TAGGTGGCACCAACCCTTCCAAATGGAACAGTACATCTATAAAAGGAAAACTGACGGCATCTACATCCTAAATCTGAAGAGGACCTGGGAGAAGCTTCTGCTGACAGCTTATGCCATTGTTGCCCTTGAAAACCCTGCTGACGTCAATGTCAGGTCGTCCAGGAATCCTGGCCAGTGGGCTGTGCTGAAGTTCGCTGCTGCCACTGGAGCTACTCCTATTGCTGGTCACTTCACT--------ACTGAAATGCTCACTAACCAGATCCAGGCAGCCTTCTGGAAGCCACGGCTTCTGGTTACTGATCTCAGGGCTGACCATCAGCCTCTCACAGAAACATCTTGTGTTAACCTGACTATCATTACTCTATGAAGCACATATTCTTCTCTGTGCTGTGTGGACATTTTCATCCCATGCAGCAAAAATGTAGCTCACTTAGTGGGTTTGATGTGGTGGATGCtgatatgagttggctgtgtccccacccaaatctcctgttgaattgtagttcccataacc--cacatgtcatgggaggaacccagtgggagataattgaatcaggggggaggtttcccatgtcctgttctcctgatagtgagtggtgcttttt----cc------------------ccttttgctcggcacttctccttgcggctgccatgtgaataaggatgtgcttccttcaccttc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67553752 803 + 86207423 GCACTATCCAGACAGGAGTCCACATGTGTGGCTCTGTGTTCCCACGGTAACTTAAATGGAAACTTTCCCAATGTCGggagtccttgatgtcctgcaaatgaaggagGAGGATGCCCTCTAGTTCCTTGCAGCTGGAACCTGC-TAGGTGGCACCAACCCTTCCAAATGGAACAGTACATCTATAAAAGGAAAACTGATGGCATCCACATCCTAAATCTGAAGAGGACCTGGGAGAAGCTTCTGCTGACAGCTTATGCCATTGTTGCCCTTGAAAACCCTGCTGATGTCAATGTCGGGTCGTCCAGGAATCCTGGCCAGTGGGATGTGCTGAAGTTCGCTGCTGCCACTGGAGCTACTCCTATTGCTGGTCACTTCGCT--------TCT-AAATCCTCACTAACCAGATCCAGGCAGCCTTCTGGAAGCCACAGCTTCTGGTTACTGATCTCGGGGCTGACCACCAGCCTCTCACAGAAGCATCTTGTGTTAACCTGACTATCATTACTCTATGAAACACATATTCTTCTCTGTGCTGTGTGGACATTTTCATCCCACACAGCAAAAATGTAGCTCACTTAGTGGGTTTGATGTGGTGGATGCtgatatgagttgg------ccccacccaaatctcatgttgaattgtagttcccataatccccacatgtcatgggaggaacccagtgggaggtaattgaatc-ggggggaggtttcccacgtcctgttctcctgatagtgagtggtgtttttt----cc------------------ccttttgctcggcacttctccttgctgctgccatgtgaataaggatgtgcttgcttccccttc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66031639 810 + 204787373 GCACTATCCAGACAGGGTTCCACATGTGTTGTTCTGGGTTCCCATGGTAACTTAAATGGAAACTTTCAGAATGTCTggagtccttgatgtcctgcaaatgaaggagGAGGATGTCCTCTAGTTTCTTGTAGCAGGAACCTGCTTAGGTGGCACCAACCCTTCCAAATGGAACAGTACATCTATAAAAGGAAAACTGAGGGCATGTACATCCTAAATCTGAAGAGGACCTGGGAGAAACTTCTGCTGACAGCTTATTCCATTGTTGCCCTTCAAAACCCTGCTGATGTCAATGTCAGATCGTCCAGGAATCTTGGCCAGTGGGCTGTGCTGAAGTTCGCTGCTGCCACTGAAGCCACTCCTATTGCTGGTCACTTCACT--------ACTGAAATCCTCACTAACCAGATCCAGGCAGCCTTCTGGGAGCC-CGGCTTCTGGTTACTGCTCTCAGGGCTGACAACCAGCCTCTCACAGAAGCATCTTGTGTTAACCTGACTACCCTTACTTTGTGAAACACATATTCTTCTCTGTGCTTTGTGGATGTTTTCCTCCCACACAGTAAAAAGGTAGCTCACTTAGTGGGTTTGATGTGGTGGATGCtgatatgagatggctgtgtccccacccaaatgtcatgttgaattgtagttcccataatccccacatgtcgt-ggaggaacccagtgggagataattgaatt-ggggggaggtttctcacatcctgttctcctgatagtcagtggtgcttttt---ccc------------------ccttttgctctgctcttctccttgcggctgccatgtgaataaggatgtgcttgcttccccttc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60963486 810 - 192460366 GCACTATCCAGACAGGGTTCCACATGTGTTGTTCTGGGTTCCCATGGTAACTTAAATGGAAACTTTCAGAATGTCTggagtccttgatgtcctgcaaatgaaggagGAGGATGTCCTCTCGTTTCTTGTAGCAGGAACCTGCTTAGGTGGCACCAACCCTTCCAAATGGAACAGTACATCTATAAAAGGAAAACTGAGGGCATGTACATCCTAAATCTGAAGAGGACCTGGGAGAAACTTCTGCTGACAGCTTATTCCATTGTCGCCCTTCAAAACCCTGCTGATGTCAATGTCAGATCGTCCAGGAATCTTGGCCAGTGGGCTGTGCTGAAGTTCGCTGCTGCCACTGAAGCCACTCCTATTGCTGGTCACTTCACT--------ACTGAAATCCTCACTAACCAGATCCAGGCAGCCTTCTGGGAGCC-CGGCTTCTGGTTACTGCTCTCAGGGCTGACAACCAGCCTCTCACAGAAGCATCTTGTGTTAACCTGACTACCCTTACTTTGTGAAACACATATTCTTCTCTGTGCTTTGTGGATGTTTTCCTCCCACACAGTAAAAAGGTAGCTCACTTAGTGGGTTTGATGTGGTGGATGCtgatatgagatggctgtgtccccacccaaatgtcatgttgaattgtagttcccataatccccacatgtcgt-ggaggaacccagtgggagataattgaatt-ggggggaggtttctcacatcctgttctcctgatagtcagtggtgcttttt---ccc------------------ccttttgctctgctcttctccttgcggctgccatgtgaataaggatgtgcttgcttccccttc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11075848 810 - 17224310 GCACTATCCAGACAGGGTTCCACATGTGTTGTTCTGGGTTCCCATGGTAACTTAAATGGAAACTTTCAGAATGTCTggagtccttgatgtcctgcaaatgaaggagGAGGATGTCCTCTAGTTTCTTGTAGCAGGAACCTGCTTAGGTGGCACCAACCCTTCCAAATGGAACAGTACATCTATAAAAGGAAAACTGAGGGCATGTACATCCTAAATCTGAAGAGGACCTGGGAGAAACTTCTGCTGACAGCTTATTCCATTGTTGCCCTTCAAAACCCTGCTGATGTCAATGTCAGATCGTCCAGGAATCTTGGCCAGTGGGCTGTGCTGAAGTTCGCTGCTGCCACTGAAGCCACTCCTATTGCTGGTCACTTCACT--------ACTGAAATCCTCACTAACCAGATCCAGGCAGCCTTCTGGGAGCC-CGGCCTCTGGTTACTGCTCTCAGGGCTGACAACCAGCCTCTCACAGAAGCATCTTGTGTTAACCTGACTACCCTTACTTTGTGAAACACATATTCTTCTCTGTGCTTTGTGGATGTTTTCCTCCCACACAGTAAAAAGGTAGCTCACTTAGTGGGTTTGATGTGGTGGATGCtgatatgagatggctgtgtccccacccaaatgtcatgttaaattgtagttcccataatccccacatgtcgt-ggaggaacccagtgggagataattgaatt-ggggggaggtttctcacatcctgttctcctgagagtcagtggtgcttttt---ccc------------------ccttttgctctgctcttctccttgcggctgccatgtgaataaggatgtgcttgcttccccttc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17387650 811 - 41321030 GCACTATTCAGACAGGGTTCCACATGTGTTGTTCTGGGTTTCCATGGTAACTTAAATGGAAACTTTCACAATGTCTggagtccttgatgtcctgcaaatgaaggagGAGGATGTCCTCTAGTTTCTTGTAGCAGGAACCTGCTTAGGTGGCACCAACCCTTCCAAATGGAACAGTACATCTATGAAAGGAAAACTGAGGGCATGTACATCCTAAATCTGAAGAGGACCTGGGAGAAACTTCTGCTGACAGCTTATTCCATTGTTGCCCTTGAAAACCCTGCTGATGTCAATGTCAGGTCGTCCAGGAATCCTGGCCAGTGGGCTGTGCTGAAGTTTGCTGCTGCTACTGAAGCCACTCCTATTGCTGGTGACTTCACT--------ACTGAAATCCTCACTAACCAGATCCAGGCAGCCTTCTGGGAGCC-CGGCTTCTGGTTACTGCTCTCAGGGCTGACAACCAGCCTCTCACAGAAGCATCTTGTGTTAACCTGACTACCCTTACTTTGTGAAACACATATTCTTCTCTGTGCTGTGTGGACGTTTTCCTCCCACACAGTAAAAAGGTAGCTCACTTAGTGGGTTTGATGTGGTGGATGCtgatatgagatggctgtgtccccacccaaatgtcatgttgaattatagttcccataatccccacatgtcgt-ggaggaacccagtgggagataattgaactgggggggaggtttctcatatcctgttctcctgatagtcagtggtgcttttt---ccc------------------ccttttgctctgctcttctccttgcagctgccatgtgaataaggatgtgcttgcttccccttc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64461274 810 - 101219884 GCACTATCCAGACAGGGTTCCACATGTGTTGTTCCGGGTTCCCATGGTAACTTAAATGGAAACTTTCACAATGTCTggagtccttgatgtcctgcaaatgaaggagGAGGATGTCCTCTAGTTTCTTGTAGCAGGAACCTGCTTAGGTGGCACCAACCCTTCCAAATGGAACAGTACATCTATAAAAGGAAAACTGAGGGCATGTACATCCTAAATCTGAAGAGGACCTGGGAGAAACTTCTGCTGACAGCTTATTCCATTGTTGCCCTTGAAAACCCTGCTGATGTCAATGTCAGATCGTCCAGGAATCCTGGCCAGTGAGCTGTGCTGAAGTTTGCTGCTGCCACTGAAGCCACTCCTATTGCTGGTCACTTCACT--------ACTGAAATCCTCACTAACCAGATCCAGGCAGTCTTCTGGGAGCC-CGGCTTCCGGTTACTGCTCTCAGGGCTGACAACCAGCCTCTCACAGAAGCATCTTGTGTTAACCTGACTACCCTTACTCGGTGAAACACATATTCTTCTCTGTGCTGTGTGGACGTTTTCCTCCCACACAGTAAAAAGGTAGCTCACTTAGTGGGTTTGATGTGGTGGATGCtgatatgagatggctatgtccccacccaaatgtcatgttgaattgtagttcccataatccccacatgtcgt-ggaggaacccagtgggagataattgaatt-ggggggaggtttctcacatcctgttctcctgatagtcagtggtgcttttt---ccc------------------ccttttgctcagctcttctccttgctgctgccatgtgaataaggatgtacttgcttccccttc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 843532 810 - 924385 GCACTATCCAGACAGGGTTCCACATGTGTTGTTCTGGGTTTCCATGGTAACTTAAATGGAAACTTTCACAATGTCTggagtccttgatgtcctgcaaatgaaggagGAGGATGTCCTCTAGTTTCTTGTAGCAGGAACCTGCTTAGGTGGCACCAACCCTTCTAAATGGAACAGTACATCTATAAAAGGAAAACTGAGGGCATGTACATCCTAAATCTGAAGAGGACCTGGGAGAAACTTCTGCTGACAGCTTATTCCATTGTTGCCCTTGAAAACCCTGCTGATGTCAATGTCAGATCGGCCAGGAATCCTGGCCAGTGGGCTGTGCTGAAGTTCGCTGCTGCCACTGAAGCCACTTCTATTGCTGGTCACTTCACT--------ACTGAAATCCTCACTAACCAGATCCAGGCAGCCTTCTGGGAGCC-CGGCTTCTGGTTACTGCTCTCAGGGCTGACAACCAGCCTCTCACAGAAGCATCTTGTGTTAACCTGACTACCCTTACTTTGTGAAACACATATTCTTCTCTGTGCTGTGTGGACGTTTTCCTCCCACACAGTAAAAAGGTAGCTCACTTAGTGGGTTTGATGTGGTGGATGAtgatatgagatggctgtgtccccacccaaatgtcatgttgaattgtagttcccataatccccacatgtcgt-ggaggaacccagtgggagataattgaatt-ggggggaggtttctcacatcctgttctcctgatagtcagtggtgcttttt---ccc------------------ccttttgctctgctcttctccttgcggctgccatgtgaataaggatgtgcttgcttccccttc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6686759 810 - 10587913 GCACTATCCAGACAGGGGTCCACATGTGTTGTTCTGGGTTCCCATGGTAACTTAAATAGAAACTTTCACAATGTCTGGAGTCCTTAATGTCCTGTAAATGAAGGAGGAGGATGTCCTCTAGTTCCTTGTAGCAGGAACTTGCTTAGGTGGCACCAACCCTTCCAAATGAAACAGTATATCTATAAAAGGAAAACTGAGGGCATGTACATCCTAAATCTGAAGAGGACCTGGGAGAAACTTCCGCTGACAGCTTATGCCATTGTTGCCCTTGAAAACCCTGCTGATGTCAATGTCAGATCGTCCAAGAATCCTGGCCAGTGGACTGTGCTGAAGTTTGCTGCTGCCACTGAAGCCACTCCTCTTGCTGGTCCCTTCACT--------ACTGAAATCCTCACTAACCACATCCAGGCAGCCTTCTGGGAGCC-CGGCTTCTGGTTACTGATCTCAGGGCTGACAACCAGTCTCTCACAGAAGCATCTTGTGTTAACCTGACTACCCTTACTCTGTGAAACACATATTCTTCTCTGTGCTGTGTGGACATTTTCCTCCCACACAGTAAAAAGGTAGCTCACTTAGTGAGTTTGATGTGGTGGATGCtgatatgagatggctgtgtccccacccaaatgtcatgttgaattgtagttcccataatccccacatgtcgt-ggaggaacccaatgggagataattgaatt-ggggggaggtttctcacatcctgttctcccgatagtcagtggtgcttttt---ccc------------------ccttttcctcgactcttctccttgctgctgccatgtgaataaggatgtgcttgcttccccttc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46014075 827 - 98464013 GCACTACCCAGAGAGGGGTCTACATGTATTGTTCTGGGTTCCCATGGTAACTTAAATGGAAACTCTCACAATGTCCGTAGCCCTTAATGTCATGCAAATGAAGGAAGAGGATGTCCTCTAGTTCCTTGAAGCAGGAATCTGCTTAGGTGGCACTGACCCTTCCAAATAAAACAGTACATCTATAAAAGGAAAACTGATGACATTCACATCCTTAATCTGAAGAGGACCTGGGAGAAGCTTCTGCTGACAGCTCATGCCATTGTTGCCCTTGAAAAGCCAGCTGATGTCAGTTTCCAGTTCTCCAGGAATCCTGGCTAGTGGACTGTACTGAAGTTTGCTGCTGCCACTGGAGCTGTTCCTATTGCTGGTCACTTCACTAGCCAGCCACTGAAACCCTCACTAACCAGATCCAGGCAAACTTCTCTGAGCCATGGTTTCCGGTTACTGATCCCAGGGCTGACCAACAGCCTCTCACAGAAGCATCTTGTGTTAACTTGACTATCATTACTCTGTGGAACAC--ATTCTTCTCTATGCTGTGTGAACATTTTCATTTCACACAGCAAAAAGGATGCTCACTTAGTGAGTTT---------GATGCtgatatgagttggctgtgtcccctcccaaatctcatgctgaactgtagttcccataatccccaaatgtcatgggaagaacccagtgggagataattaaatc-atggaaaggtttcccgcatcctgttctcctgatagtgagtggtgcttcccaccctcccccccccctccccgcggccttttgctcagcactt---cttgctgctgccgtgtgaataaggatatgtttgcttccccttt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27696907 808 + 27742158 GCACTACCCAGAGAAGGGTCTACATTTATTGTTCTGGGTTCCCATGGTAACTTAAATGGAAACTCTCACAATGTCCGTAGCCCTTAATGTCATGCAAATGAAGGAAGAGGATGTCCTCTAGTTCCTTGAAGCAGGAATCTGCTTAGGTGGCACCAACCCTTCCAAATAAAACAGTACATCTATAAAAGGAAAACTGATGGCATTCACATCCTTAATCTGAAGAGGACCTGGGAGAAGCTTCTGCTGACAGCTCATGCCATTGTTGCCCTTGAAAAGCCAGCTGATGTCTGTTTCAGATTCTCCAGGAATCCTGGCCAGGGGGTTTT-CTGAAGTTTGCTCCTGCCACTGGAGCTACTCCTATTGCTGGTCACTTCACTAGCCAGCCACTGAAACCCTCGCTAACCAGATCCAGGCAGCCTTCTGTGAGCCATGGTTTCTGGTTACTGATCCCAGGGCTGACCAACAGCCTCTCACAGAAGCCTCTTGTGTTAACCTGACTATCATGACTCTGTGGAACAC--ATTCTTCTCTGTGCTGTGTGGACATTTTCATCCCACACAGCAAAAAGGACGCTGACTCAGTGAGGTC---------GATGCtgataggagttggctgtgtcccctcccaaatctcatattgaactgtagtttccgtaatccccaaatgtcatgggaacaaccctgcgggagataattgaatc-atgggaaagtttcccacgtcctgttctcctaatagtgagtggtgctttttttcccc------------------ccttttgctcagcactt---cttgctgctgccatgtgaataaaaacatgtttgcttctccttc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 234245 806 - 4835464 GCACTACCCAGGGA-GGATCTACATGTATTGTTCTGAGTTCCCATGGTAACTTAAATGGAAACTCTCACAATGTCCGTAGTCCTTAATGTCATGCAAATGAAGGAAGAGGATGTCCTCTACTTCATTGAAGCAGCAATCTGCTTAGGTGGCACCAACCCTTCCAAATAAAACAGTACATCTATAAAAGGAAAACTGATGGCATTCACATCCTTAATCTGAAGAGGACCTGGGAGAAGCTTCTGCTGATAGCTCATGCCATTGTTGCCCTTGAAAAGCCAGCTGATATCGGTTTCAGATTCTCCAGGAATACTGGCCAGTGGGCTGTGTTGAAGTTTGCTGCTGCCACTGGAGCTACTCCTATTGCTGGTCACTTCACTAGCCAGCCACTGAAACCCTCACTAACCAGATCCAGACAGCCTTCTGTGAGCCACGGTTTCTGTCTACTGATCACAGGGCTGACCAACAGCCTCTCACAGAAGCATCCTGTGTTAACCTGACTATCATTACTCTGTGAAACAC--ATTCTTCTCTGTGCTGTGTGGACATTTTCATCCCACATAGCAAAAAGGACGCTCACTTAGTAAGTTT---------GATGCtgatatgagttggctgtgtcccctctcaaatctcatgttgaactatagttctcataatccccaaatgtcatgggaagaacccagtgggagataattgaatc-atgggaaggcttcccacatcctgtt---ctgatagtgagtggtgcttttttttccc-----------------accttttgctcagcgctt---cttgctgctgccatgtgaataaggacatgtttgcttccccttc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3693065 809 + 4093027 GCACTACCCAGAGAGGGGTCTACATGTATTGTTCTGGGTTCCCATGGTAAGTTAAATGGAAACTCTCACAATGTCCATAGCCCTTAATGTCATGCAAATGAAGGAAGAGGATGCCCTCTAGTTCCTTGAAGCAGGAATCTGCTTAGGTGGCATCAACCCTTCCAAATAAAACAGTACATCTATAAAAGGAAAACTGATGGCATTCACATCCTTAATCTGAAGAGGACCTGGGAGAAGCTTCTGCTGACAGCTCATGCCATTGTTGCCCTTGAAAAGCCAGCTGATGTTGCCTTCAGATTCTTCAGGAATCCCGGCCAGTGGGCTGTGCTGAAGTTTGCTGCTGCCACTGGAGCTACTCCTATTGCTGGTCACTTCACTAGCCAGCCACTGAAACCCTCACTAACCAGATCCAGGCAGCCTTCTGTGAGCCATGGTTTCTGGTTACTGATCCCAGGGCTGACCGACAGCCTCTCACAGAAGCATCTTGTGTTAACCTGACTATCATTACTCTGTGGAACAC--ATTCTTCTCTGTGCTATGTGGACATTTTCATCCCACACAGCAAAAAGGAAGCTCACTGAGTGAGTTT---------GATGCtgatatgaattggctgtgtcccctcccaaatctcatgttgaactgtagttcccataatccccaaatgtcatgggaagaacccagtgggagataactgaatc-atgggaaggtttcccacatcctgttctcctgatagtgagtggtgctcttttttcct------------------tcttttgctcagcactt---cttgctgctgccatgtgagtaaggacatgtttgcttccccttc i aotNan1.NW_018502033v1 C 0 C 0 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e mm10.chr6 45719615 6595 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e otoGar3.GL873534 11025215 6082 + 30473821 I e canFam3.chr20 16572341 4290 + 58134056 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=198463.000000 s hg38.chrUn_KI270749v1 82376 21 + 158759 tgccatgattgtaagtttcct--- s panTro5.chr3 201970024 21 - 202621043 tgccatgattgtaagtttcct--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738036 21 - 205426864 tgccatgattgtaagtttcct--- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554555 21 + 86207423 tgccatgattgtaagtttcct--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66032449 21 + 204787373 tgccatgactgtaagtttcct--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60964296 21 - 192460366 tgccatgactgtaagtttcct--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11076658 21 - 17224310 tgccatgactgtaagtttcct--- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17388461 21 - 41321030 tgccatgactgtaagtttcct--- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64462084 21 - 101219884 tgccatgactgtaagtttcct--- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 844342 21 - 924385 tgccatgactgtaagtttcct--- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6687569 21 - 10587913 tgccatgattgtaagtttcct--- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46014902 21 - 98464013 taccataattgttagtttcct--- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27697715 21 + 27742158 tgccatgattgtaagtttcct--- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 235051 21 - 4835464 tgccatgattgtaagtttcct--- i cebCap1.NW_016107467v1 C 0 I 1406 s aotNan1.NW_018502033v1 3693874 21 + 4093027 tgccatgattgtaagtttcct--- i aotNan1.NW_018502033v1 C 0 I 1363 s otoGar3.GL873534 11031297 24 + 30473821 TGCCTTaattataaatcatttatt i otoGar3.GL873534 I 6082 C 0 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e mm10.chr6 45719615 6595 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e canFam3.chr20 16572341 4290 + 58134056 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=83389.000000 s hg38.chrUn_KI270749v1 82397 13 + 158759 gag------gcctccccag s panTro5.chr3 201970045 13 - 202621043 gag------gcctccccag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738057 13 - 205426864 gag------gcctccccag i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554576 13 + 86207423 gag------gcctccccag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66032470 13 + 204787373 gag------gcctccccag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60964317 13 - 192460366 gag------gcctccccag i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11076679 13 - 17224310 gag------gcctccctag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17388482 13 - 41321030 gag------gcctccccag i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64462105 13 - 101219884 gag------gcctccccag i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 844363 13 - 924385 gag------gcctccccag i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6687590 13 - 10587913 gag------gcctccccag i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46014923 13 - 98464013 ctg------gcctacccag i calJac3.chr15 C 0 I 1662 s saiBol1.JH378125 27697736 13 + 27742158 ctg------gcctacccag i saiBol1.JH378125 C 0 I 1344 s otoGar3.GL873534 11031321 19 + 30473821 gaggatctagtactcccag i otoGar3.GL873534 C 0 C 0 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e mm10.chr6 45719615 6595 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e aotNan1.NW_018502033v1 3693895 1363 + 4093027 I e cebCap1.NW_016107467v1 235072 1406 - 4835464 I e canFam3.chr20 16572341 4290 + 58134056 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=175304.000000 s hg38.chrUn_KI270749v1 82410 36 + 158759 tcatgccaaacagttagttaattaaacctctttctt s panTro5.chr3 201970058 36 - 202621043 tcatgccaaacagttagttaattaaacctctttctt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738070 36 - 205426864 tcatgccaaacagttagtttattaaacctctttctt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554589 36 + 86207423 tcatgccaaacagttagttaattaaacctctttctt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66032483 36 + 204787373 ccatgccaaacagttagttaattagacctctttctt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60964330 36 - 192460366 ccatgccaaacagttagttaattagacctctttctt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11076692 36 - 17224310 ccatgccaaacagttagttaattagacctctttctt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17388495 36 - 41321030 tcatgccaaacagttagttaattagacctctttctt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64462118 36 - 101219884 tcatgccaaacagttagttaattagacctctttctt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 844376 36 - 924385 tcatgccaaacagttagttaattagacctctttctt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6687603 36 - 10587913 tcatgccaaacagtaagttcattaaacctctttctt i colAng1.NW_012114711v1 C 0 C 0 s otoGar3.GL873534 11031340 36 + 30473821 gtattttgataagctctttacgtatatatctctttt i otoGar3.GL873534 C 0 C 0 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e mm10.chr6 45719615 6595 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e aotNan1.NW_018502033v1 3693895 1363 + 4093027 I e cebCap1.NW_016107467v1 235072 1406 - 4835464 I e canFam3.chr20 16572341 4290 + 58134056 I e dasNov3.JH563077 1753297 2390 - 2187301 I e saiBol1.JH378125 27697749 1344 + 27742158 I e calJac3.chr15 46014936 1662 - 98464013 I a score=159976.000000 s hg38.chrUn_KI270749v1 82446 34 + 158759 tatgaatca--------cccagtct-----------tgcgcttgtctttatta s panTro5.chr3 201970094 34 - 202621043 tatgaatta--------cccagtct-----------tgcacatgtctttatta i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738106 34 - 205426864 tatgaatta--------cccagtct-----------tgcacatgtctttatta i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554625 34 + 86207423 tataaatta--------cccagtct-----------tgggcatgtctttatta i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66032519 34 + 204787373 tataaatta--------cccagtct-----------tgggcatgtctttatta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60964366 34 - 192460366 tataaatta--------cccagtct-----------tgggcatgtctttatta i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11076728 34 - 17224310 tataaatta--------cccagtct-----------tgggcatgtctttatta i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17388531 34 - 41321030 tataaatta--------cccagtct-----------tgggcatgtctttatta i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64462154 34 - 101219884 tataaatta--------cccagtct-----------tgggcatgtctttatta i chlSab2.chr22 C 0 I 8783 s manLeu1.NW_012098965v1 844412 34 - 924385 tataaatta--------cccagtct-----------ttggcatgtctttatta i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6687639 34 - 10587913 tataaatta--------cccagtct-----------tgggcatgtctttatta i colAng1.NW_012114711v1 C 0 C 0 s otoGar3.GL873534 11031376 53 + 30473821 tattaatcaactctcccccaaatctctccagttcaatgttctcatccccagta i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45726210 34 - 149736546 TATATCTCT--------CCCAGACT-----------TGAGATTAGTATTCTAA i mm10.chr6 I 6595 C 0 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e aotNan1.NW_018502033v1 3693895 1363 + 4093027 I e cebCap1.NW_016107467v1 235072 1406 - 4835464 I e canFam3.chr20 16572341 4290 + 58134056 I e dasNov3.JH563077 1753297 2390 - 2187301 I e saiBol1.JH378125 27697749 1344 + 27742158 I e calJac3.chr15 46014936 1662 - 98464013 I a score=11852.000000 s hg38.chrUn_KI270749v1 82480 3 + 158759 gca s panTro5.chr3 201970128 3 - 202621043 gca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738140 3 - 205426864 gca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554659 3 + 86207423 gca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66032553 3 + 204787373 gca i rheMac8.chr2 C 0 I 8768 s macFas5.chr2 60964400 3 - 192460366 gca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11076762 3 - 17224310 gca i macNem1.NW_012018021v1 C 0 I 8362 s cerAty1.NW_012009469v1 17388565 3 - 41321030 gca i cerAty1.NW_012009469v1 C 0 I 8747 s manLeu1.NW_012098965v1 844446 3 - 924385 gca i manLeu1.NW_012098965v1 C 0 I 8815 s colAng1.NW_012114711v1 6687673 3 - 10587913 gca i colAng1.NW_012114711v1 C 0 I 9031 s otoGar3.GL873534 11031429 1 + 30473821 --a i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45726244 3 - 149736546 TCT i mm10.chr6 C 0 C 0 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e aotNan1.NW_018502033v1 3693895 1363 + 4093027 I e cebCap1.NW_016107467v1 235072 1406 - 4835464 I e canFam3.chr20 16572341 4290 + 58134056 I e dasNov3.JH563077 1753297 2390 - 2187301 I e saiBol1.JH378125 27697749 1344 + 27742158 I e calJac3.chr15 46014936 1662 - 98464013 I e chlSab2.chr22 64462188 8783 - 101219884 I a score=3140.000000 s hg38.chrUn_KI270749v1 82483 4 + 158759 ctgt s panTro5.chr3 201970131 4 - 202621043 ctgt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738143 4 - 205426864 ctgt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554662 4 + 86207423 ctgt i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60964403 4 - 192460366 gcgt i macFas5.chr2 C 0 I 8763 s otoGar3.GL873534 11031430 2 + 30473821 --ga i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45726247 4 - 149736546 CCGT i mm10.chr6 C 0 C 0 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1342350 11816 - 1467263 I e papAnu3.chr2 59523080 10447 + 187378091 I e nasLar1.chr2 57693573 10567 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1198161 10514 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e manLeu1.NW_012098965v1 844449 8815 - 924385 I e macNem1.NW_012018021v1 11076765 8362 - 17224310 I e rheMac8.chr2 66032556 8768 + 204787373 I e aotNan1.NW_018502033v1 3693895 1363 + 4093027 I e cebCap1.NW_016107467v1 235072 1406 - 4835464 I e canFam3.chr20 16572341 4290 + 58134056 I e dasNov3.JH563077 1753297 2390 - 2187301 I e saiBol1.JH378125 27697749 1344 + 27742158 I e calJac3.chr15 46014936 1662 - 98464013 I e colAng1.NW_012114711v1 6687676 9031 - 10587913 I e chlSab2.chr22 64462188 8783 - 101219884 I e cerAty1.NW_012009469v1 17388568 8747 - 41321030 I a score=39881.000000 s hg38.chrUn_KI270749v1 82487 3 + 158759 -gag s panTro5.chr3 201970135 3 - 202621043 -gag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738147 3 - 205426864 -gag i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554666 3 + 86207423 -gag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041324 3 + 204787373 -gag i rheMac8.chr2 I 8768 C 0 s macFas5.chr2 60973170 3 - 192460366 -gag i macFas5.chr2 I 8763 C 0 s macNem1.NW_012018021v1 11085127 3 - 17224310 -gag i macNem1.NW_012018021v1 I 8362 C 0 s cerAty1.NW_012009469v1 17397315 3 - 41321030 -gag i cerAty1.NW_012009469v1 I 8747 C 0 s papAnu3.chr2 59533527 3 + 187378091 -gag i papAnu3.chr2 I 10447 C 0 s chlSab2.chr22 64470971 3 - 101219884 -gag i chlSab2.chr22 I 8783 C 0 s manLeu1.NW_012098965v1 853264 3 - 924385 -gag i manLeu1.NW_012098965v1 I 8815 C 0 s nasLar1.chr2 57704140 3 + 181502896 -gag i nasLar1.chr2 I 10567 I 4297 s colAng1.NW_012114711v1 6696707 3 - 10587913 -gag i colAng1.NW_012114711v1 I 9031 C 0 s rhiRox1.KN296641v1 1354166 3 - 1467263 -gag i rhiRox1.KN296641v1 I 11816 I 2724 s rhiBie1.NW_016820128v1 1208675 3 - 2311269 -gag i rhiBie1.NW_016820128v1 I 10514 I 1565 s calJac3.chr15 46016598 3 - 98464013 -gag i calJac3.chr15 I 1662 C 0 s saiBol1.JH378125 27699093 3 + 27742158 -gag i saiBol1.JH378125 I 1344 C 0 s aotNan1.NW_018502033v1 3695258 3 + 4093027 -gag i aotNan1.NW_018502033v1 I 1363 C 0 s otoGar3.GL873534 11031432 3 + 30473821 -gag i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45726251 1 - 149736546 T--- i mm10.chr6 C 0 C 0 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e micMur3.chr32 1591920 4156 - 9149476 I e ponAbe2.chr3 69625268 3721 + 202140232 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e cebCap1.NW_016107467v1 235072 1406 - 4835464 I e canFam3.chr20 16572341 4290 + 58134056 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=26478.000000 s hg38.chrUn_KI270749v1 82490 3 + 158759 GAG s panTro5.chr3 201970138 3 - 202621043 gaG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738150 3 - 205426864 GAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554669 3 + 86207423 GAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041327 3 + 204787373 aag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973173 3 - 192460366 aag i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085130 3 - 17224310 aag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397318 3 - 41321030 aag i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59533530 3 + 187378091 aag i papAnu3.chr2 C 0 I 2660 s chlSab2.chr22 64470974 3 - 101219884 aag i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853267 3 - 924385 aag i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6696710 3 - 10587913 gag i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016601 3 - 98464013 gag i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699096 3 + 27742158 gag i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3695261 3 + 4093027 gag i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11031435 3 + 30473821 gag i otoGar3.GL873534 C 0 I 3 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e mm10.chr6 45726252 0 - 149736546 C e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e cebCap1.NW_016107467v1 235072 1406 - 4835464 I e canFam3.chr20 16572341 4290 + 58134056 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=8666.000000 s hg38.chrUn_KI270749v1 82493 1 + 158759 C s panTro5.chr3 201970141 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738153 1 - 205426864 C i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554672 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041330 1 + 204787373 c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973176 1 - 192460366 c i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085133 1 - 17224310 c i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397321 1 - 41321030 c i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64470977 1 - 101219884 c i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853270 1 - 924385 c i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6696713 1 - 10587913 c i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016604 1 - 98464013 c i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699099 1 + 27742158 c i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3695264 1 + 4093027 c i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45726252 1 - 149736546 T i mm10.chr6 C 0 C 0 e proCoq1.NW_012148064v1 558495 7689 + 2414909 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e otoGar3.GL873534 11031438 3 + 30473821 I e cebCap1.NW_016107467v1 235072 1406 - 4835464 I e canFam3.chr20 16572341 4290 + 58134056 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=54977.000000 s hg38.chrUn_KI270749v1 82494 5 + 158759 AGAGT s panTro5.chr3 201970142 5 - 202621043 AGAGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738154 5 - 205426864 AGAGT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554673 5 + 86207423 AGAGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041331 5 + 204787373 agagt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973177 5 - 192460366 agagt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085134 5 - 17224310 agagt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397322 5 - 41321030 agagt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64470978 5 - 101219884 agagt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853271 5 - 924385 agagt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6696714 5 - 10587913 agagt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016605 5 - 98464013 agaat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699100 5 + 27742158 agagt i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3695265 5 + 4093027 agagt i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 566184 5 + 2414909 agagt i proCoq1.NW_012148064v1 I 7689 C 0 s otoGar3.GL873534 11031441 5 + 30473821 aaact i otoGar3.GL873534 I 3 C 0 s mm10.chr6 45726253 5 - 149736546 AGAAT i mm10.chr6 C 0 C 0 e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e cebCap1.NW_016107467v1 235072 1406 - 4835464 I e canFam3.chr20 16572341 4290 + 58134056 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=414904.000000 s hg38.chrUn_KI270749v1 82499 39 + 158759 TGCTTGAACATCTATGAtaacttgccacagctctagtta s panTro5.chr3 201970147 39 - 202621043 TGCTTGAACATCTATGAtaacttgccacagctctagtta i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738159 39 - 205426864 TGCTTGAACATCTATGAtaacttgccacagctctagtta i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554678 39 + 86207423 TGCTTGAACATCTATGAtaacttgccacagctctagtta i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041336 39 + 204787373 tgcttgaacatctatgataacttgccacagctctagtta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973182 39 - 192460366 tgcttgaacatctatgataacttgccacagctctagtta i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085139 39 - 17224310 tgcttgaacatctatgataacttgccacagctctagtta i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397327 39 - 41321030 tgcttgaacatctgtgataacttgtcacagctctagtta i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64470983 39 - 101219884 tgcttgaacatctatgataacttgccacagctctggtta i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853276 39 - 924385 tgcttgaacatctatgataacttgtcacagctctagtta i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6696719 39 - 10587913 tgcttgaacatctatgataacttgccacagctctagtta i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016610 39 - 98464013 agcttgaacatctatgataacttgccacagctctagtta i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699105 39 + 27742158 ggcatgaacatctatgataacttgccacagctctagtta i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3695270 39 + 4093027 agcttgaacatctatgataacttgccacagctctagtta i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 566189 39 + 2414909 tgcttgaatatctatggtaacttgtcacagctctggtaa i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11031446 38 + 30473821 tgattgaacagctatggtaac-tgccacagctctagaaa i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45726258 22 - 149736546 TGATTGAGCTCCTCTATTTA-----------------TA i mm10.chr6 C 0 C 0 s canFam3.chr20 16576631 39 + 58134056 tgtgtgaccatttgtggccacctgccacagctctggtaa i canFam3.chr20 I 4290 C 0 e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e cebCap1.NW_016107467v1 235072 1406 - 4835464 I e dasNov3.JH563077 1753297 2390 - 2187301 I a score=157717.000000 s hg38.chrUn_KI270749v1 82538 15 + 158759 agggcaaattcagaa s panTro5.chr3 201970186 15 - 202621043 agggcaaattcagaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738198 15 - 205426864 agggcaaattcagaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554717 15 + 86207423 agggcaaattcagaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041375 15 + 204787373 agggcaaattcagaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973221 15 - 192460366 aggacaaattcagaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085178 15 - 17224310 agggcaaattcagaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397366 15 - 41321030 agggcaaattcagaa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471022 15 - 101219884 agggcaaattcagaa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853315 15 - 924385 agggcaaattcagaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6696758 15 - 10587913 agggcaaattcagaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016649 15 - 98464013 agagcaaattcagaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699144 15 + 27742158 acggcaaattcagaa i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3695309 15 + 4093027 aaggcaaattcagaa i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 566228 15 + 2414909 ggggcaaaaccagaa i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11031484 15 + 30473821 aaggcaaaacaaaaa i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45726280 13 - 149736546 AATGCAAAGTGAA-- i mm10.chr6 C 0 C 0 s canFam3.chr20 16576670 15 + 58134056 aggacacaaccagaa i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1755687 15 - 2187301 AGAATAAAACTGAAA i dasNov3.JH563077 I 2390 C 0 e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e cebCap1.NW_016107467v1 235072 1406 - 4835464 I a score=686018.000000 s hg38.chrUn_KI270749v1 82553 56 + 158759 ttcaa-agccaggaggagtccaaggcca------aaggccactttcatgaccattatAATTCT s panTro5.chr3 201970201 56 - 202621043 ttcaa-agccgggaggagtccaaggcca------aaggccactttcatgaccattatAATTCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738213 56 - 205426864 ttcaa-agccaggaggagtccaaggcca------aaggccactttcatgaccattatAATTCT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554732 56 + 86207423 ttcaa-agccaggaggagtccaaggtca------aaggccactttcatgaccattatAATTCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041390 56 + 204787373 ttcaa-agccaggaggagtccaaggccA------AAGGCCACCTTCATGACCATTATAATTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973236 56 - 192460366 ttcaa-agccaggaggagtccaaggcca------aaggccaccttcatgaccattatAATTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085193 56 - 17224310 ttcaa-agccaggaggagtccaaggccA------AAGGCCACCTTCATGACCATTATAATTCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397381 56 - 41321030 ttcaa-aaccaggaggagtccaaggccA------AAGGCCACCTTCATGACCATTATAATTCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471037 56 - 101219884 ttcaa-agccaggaggagtccaaggcca------aaggccaccttcatgaccattatAATTCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853330 56 - 924385 ttcaa-agccaggaggagtccaaggccA------AAGGCCACCTTCATGACCATTATAATTCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6696773 56 - 10587913 ttcaa-agccaggaggagtccaaggccA------AAGGCCACCTTCATGACCATTATAATTCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016664 56 - 98464013 ttcga-agccaggaggcatctgtggcca------aaggccaccttcatgaccattatAATTCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699159 56 + 27742158 ttcaa-agccaggaggcatctgtggcca------aaggccaccttcacgaccattatAATTCT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 236478 56 - 4835464 TTCAA-AGCCAGGAGGCATCTGTGGCCA------AAGGCAACCTTCATGACCATTATAATTCT i cebCap1.NW_016107467v1 I 1406 C 0 s aotNan1.NW_018502033v1 3695324 56 + 4093027 ttcac-agccaggaggcatctgtggcca------aaggccaccttcatgaccattatAATTCT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 566243 56 + 2414909 cttaa-actcagggggagcccaaggcca------aaggccACCTTCATAACTATTATGATTCT i proCoq1.NW_012148064v1 C 0 I 56 s otoGar3.GL873534 11031499 62 + 30473821 tttaa-actcaggggaagtccaaggccaaaagccaaagccacgttagtacccattatgACTTT i otoGar3.GL873534 C 0 I 7 s mm10.chr6 45726293 56 - 149736546 TGCAG-ATTTAGGAAAAGTTCAAGGTCA------ACGTCATCTTTTATGATCATAAAAATACC i mm10.chr6 C 0 I 6 s canFam3.chr20 16576685 54 + 58134056 ttcaa-acccaggaagAGTCCAAAA--A------AAGGCCACATTTAAAACCATTATAATCTT i canFam3.chr20 C 0 I 7 s dasNov3.JH563077 1755702 57 - 2187301 TTCAATACCCAAGTGGACTCTGAGACCT------ATGGTCACCCGTTTAATCTCCCCTACTTC i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=506933.000000 s hg38.chrUn_KI270749v1 82609 48 + 158759 CCACTCCCAGGCAGTAAGGACAGATATAGAAATTATCCATTGAAAGTT--- s panTro5.chr3 201970257 48 - 202621043 CCACTCCCAGGCAGTATGGACAGATATAGAAATTATCCATTGAAAGTT--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738269 48 - 205426864 CCACTCCCAGGCAGTATGGACAGATATAGAAATTATCCATTGAAAGTT--- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554788 48 + 86207423 CCACTCCCAGGCAGTATGGACAGATATAGAAATTATCCATTGAAAGTT--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041446 48 + 204787373 CCACTCCCAGGCAGTATGGACAGATATAGAAATTATCCACTGAAAGTT--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973292 48 - 192460366 CCACTCCCAGGCAGTATGGACAGATATAGAAATTATCCACTGAAAGTT--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085249 48 - 17224310 CCACTCCCAGGCAGTATGGACAGATATAGAAATTATCCACTGAAAGTT--- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397437 48 - 41321030 CCACTCCCAGGCAGTATGGACAGATATAGAAATTATCCACTGAAAGTT--- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471093 48 - 101219884 CCACTCCCAGGCAGTATGGACAGATATAGAAATTATCCAGTGAAAGTT--- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853386 48 - 924385 CCACTCCCAGGCAGTATGGACAGATATAGAAATTATCCACTGAAAGTT--- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6696829 48 - 10587913 CCACTCCCAGACAGTATGGACAGATATAGAAATTATCCACTGAAAGTT--- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016720 48 - 98464013 CCACCCCCAGGCAGTATAGACAGATATAGAAATTATCCATTAAAAGTT--- i calJac3.chr15 C 0 I 2 s saiBol1.JH378125 27699215 48 + 27742158 CCACCCTCAGGTAGTATGGACAGATATAGACCTTATCCATTAAAAGTT--- i saiBol1.JH378125 C 0 I 2 s cebCap1.NW_016107467v1 236534 48 - 4835464 CCACCCCCAGGCAGTATGGACAGATATAGAAATTATCCATTAAAAGTT--- i cebCap1.NW_016107467v1 C 0 I 2 s aotNan1.NW_018502033v1 3695380 48 + 4093027 CCACCCCCAGGCAGTATGGACAGATATAGAAATTATCCATTAAAAGTT--- i aotNan1.NW_018502033v1 C 0 I 2 s otoGar3.GL873534 11031568 48 + 30473821 CCACCTTCAGCTAATAAGGTCATATAGAGAATGTATCCTTTTAAAAAT--- i otoGar3.GL873534 I 7 I 3 s mm10.chr6 45726355 34 - 149736546 CAACCCTTAGGTAACATA---AGACA-AAAAGGTATCC------------- i mm10.chr6 I 6 C 0 s canFam3.chr20 16576746 44 + 58134056 CTACTCCTCCGCAGTGTGAACAGACATAGA----GTCCTTTATAAGTA--- i canFam3.chr20 I 7 I 3 s dasNov3.JH563077 1755759 51 - 2187301 CTGTCCCCACACAGTATGGAGAGACATAGAAAGAATCCTTTAGATATAAGA i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 566299 56 + 2414909 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=906096.000000 s hg38.chrUn_KI270749v1 82657 81 + 158759 TATGGAGTCAGAGAAATTTCATGAATTTTACAGTTTTTTTTTT-ATTTAGTAAC-TAGCAGGATTTTGTTAAGATTAATAATT s panTro5.chr3 201970305 82 - 202621043 TATGGAGTCAGAGAAATTTCATGAATTTTACAGTTTTTTTTTTAATTTAGTAAC-TAGCAGGATTTTGTTAAgattaataatt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738317 80 - 205426864 TATGGAGTCAGAGAAATTTCATGAATTTTACAGTTTTTTTTT--ATTTAGTAAC-TAGCAGGATTTTGTTAAgattaataatt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554836 82 + 86207423 TATGGAGCCAGAGAAATTTCATGAATTTTACAGTTTTTATTTT-ATTTAGTAACTTGGCAGGATTTTGTTAAGATTAATAATT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041494 78 + 204787373 TATGGAGCCAGATAAATTTCATGAATTTTACAGTTTTTATTTT-ATTTAGTAAC-TAGCAGGATTTTG---Agattaataatt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973340 78 - 192460366 TATGGAGCCAGATAAATTTCATGAATTTTACAGTTTTTATTTT-ATTTAGTAAC-TAGCAGGATTTTG---AGATTAATAATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085297 78 - 17224310 TATGGAGCCAGATAAATTTCATGAATTTTACAGTTTTTATTTT-ATTTAGTAAC-TAGCAGGATTTTG---Agattaataatt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397485 78 - 41321030 TATGGAGCCAGATAAATTTCATGAATTTTACAGTTTTTATTTT-ATTTAGTAAC-TAGCAGGATTTTG---Agattaataatt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471141 78 - 101219884 TATGGAGCCAGATAAATTTCATGAATTTTACAGTTTTTATTTT-ATTTAGTAGC-TAGCAGGATTTTG---AGATTAATAATT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853434 78 - 924385 TATGGAGCCAGATAAATTTCATGAATTTTACAGTTTTTATTTT-ATTTAGTAAC-TAGCAGGATTTTG---AGATGAATAATT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6696877 78 - 10587913 TATGGAGCCAGATAAATTTCATGAATTCTACAGTTTTTATTTT-ATTTAGTAAC-TAGCAGAATTTCG---AGATTAATAATT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016770 81 - 98464013 TATAGAGCCAGAAAAATTTCATGAATTTTACAGTTTTTATTTT-GTTTAGTAAC-TAGCAGGATTGTGTTTAGATAAATAATG i calJac3.chr15 I 2 C 0 s saiBol1.JH378125 27699265 81 + 27742158 TATGGAGCCAGAGAAATTTCATGAATTTTATAGTTGTTATTTT-ATTTAGTAAC-TAGcaggattgtgttgagataaataatg i saiBol1.JH378125 I 2 C 0 s cebCap1.NW_016107467v1 236584 81 - 4835464 TATGGAGCCAGAGAAATTTCATGAATTTTATAGTTTTTATTTT-ATTTAGTAAC-TAGCAGGATTGTGTTGAGATAAATAATA i cebCap1.NW_016107467v1 I 2 C 0 s aotNan1.NW_018502033v1 3695430 79 + 4093027 TATGGAGCCAGAGAAATTTCATGAATTTT--AGTTTTTATTTT-ATTTAGTAAC-TAGCAGGATTGTGTTGAGATAAATATTG i aotNan1.NW_018502033v1 I 2 C 0 s proCoq1.NW_012148064v1 566355 81 + 2414909 TATGGAGTCAGAGAAACTTCTTGGATTACTTAGGTTTTATTTT-ATTTGATAAC-TAGCAAGATTATGTTAAGATTAATAATT i proCoq1.NW_012148064v1 I 56 I 681 s otoGar3.GL873534 11031619 79 + 30473821 TATGGAATCAG-GAAAGTTCATGGATTACCTAGG-TTTGTTTT-ATTTAGTAAC-TAGCAGGATTGTGTTGAGATTCACCATT i otoGar3.GL873534 I 3 C 0 s mm10.chr6 45726389 66 - 149736546 --------CAGTGAACTATCA-GAAGCAACCAGGGTT-------ATTTAGTAAC-TAGCATGCTTGTGCTAAGATTAGTAATT i mm10.chr6 C 0 C 0 s canFam3.chr20 16576793 81 + 58134056 TCGGGAGCCAGAGAAACTTCACAGATTGCTCAGGTTTTATTTT-GTTTAGCATC-Tagcagcactgtgttgaagttaaaattt i canFam3.chr20 I 3 I 1 s dasNov3.JH563077 1755810 81 - 2187301 CCTGGATCCAGAGAACATCCATGAATGACCCAGGTTTCACTTT-ATTTAGTAAC-TGGCAGGATTGTGTTGATGCTACTAACT i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=121904.000000 s hg38.chrUn_KI270749v1 82738 9 + 158759 TGGGCTCCA s panTro5.chr3 201970387 9 - 202621043 tgggctcca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738397 9 - 205426864 tgggctcca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554918 9 + 86207423 TGGGCTCCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041572 9 + 204787373 tgggctcca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973418 9 - 192460366 TGGGCTCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085375 9 - 17224310 tgggctcca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397563 9 - 41321030 tgggctcca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471219 9 - 101219884 TGGGCTCCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853512 9 - 924385 TGGGCTCCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6696955 9 - 10587913 TGGGCTGCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016851 9 - 98464013 TGGGCTCCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699346 9 + 27742158 tgggctcca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 236665 9 - 4835464 TGGGCTCCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3695509 9 + 4093027 TGGGCTCCA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11031698 9 + 30473821 TGTGCTCTA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45726455 9 - 149736546 TAAATACCA i mm10.chr6 C 0 I 1001 s canFam3.chr20 16576875 9 + 58134056 tgggctcta i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1755891 9 - 2187301 TGggctcta i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 566436 681 + 2414909 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=268756.000000 s hg38.chrUn_KI270749v1 82747 24 + 158759 GAGCCAACTTTACTGGGTTCAA-----------AT s panTro5.chr3 201970396 24 - 202621043 gagccaactttcctgggttcaa-----------at i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738406 24 - 205426864 gagccaactttcctgggttcaa-----------at i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554927 24 + 86207423 GAGCAAACTTTCTTGGGTTCAA-----------AT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041581 24 + 204787373 gagtcaacttgcctgggttcaa-----------at i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973427 24 - 192460366 GAGTCAACTTGCCTGGGTTCAA-----------AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085384 24 - 17224310 gagtcaacttgcctgggttcaa-----------at i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397572 24 - 41321030 gagtcaacttgcctgggttcaa-----------at i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471228 24 - 101219884 GAGTCAACTTGCCTGGGTTCAA-----------AT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853521 24 - 924385 GAGTCAACTTGCCTGGGTTCAA-----------AT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6696964 24 - 10587913 GAGTCAACTTGCCTGGGTTCAA-----------AT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016860 24 - 98464013 GAGTCAACTTGCCTGAGTTCAA-----------AT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699355 24 + 27742158 gagccaacttgcctgggttcaa-----------at i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 236674 24 - 4835464 GAGCCAACTTGCCAGGGTTCAA-----------AT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3695518 24 + 4093027 GAGCCAACTTACCTGGATTCAA-----------AT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11031707 35 + 30473821 GAGCCAATTTGCCCAAGTTCAAATTCTAGGTCCAT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16576884 24 + 58134056 gagtcagcttgcctgggtttaa-----------at i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1755900 24 - 2187301 gagccagcttcccagagtttca-----------at i dasNov3.JH563077 C 0 I 3776 e proCoq1.NW_012148064v1 566436 681 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=110865.000000 s hg38.chrUn_KI270749v1 82771 12 + 158759 AC-----------ACTTATTAAA s panTro5.chr3 201970420 12 - 202621043 AC-----------ACTTATTAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738430 12 - 205426864 AC-----------ACTTATTAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554951 12 + 86207423 AC-----------ACTTAGTAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041605 12 + 204787373 AC-----------ACTTATTAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973451 12 - 192460366 AC-----------ACTTATTAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085408 12 - 17224310 AC-----------ACTTATTAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397596 12 - 41321030 AC-----------ACTTATTAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471252 12 - 101219884 AC-----------ACTTATTAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853545 12 - 924385 AC-----------ACTTATTAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6696988 12 - 10587913 AC-----------ACTTATTAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016884 12 - 98464013 AC-----------ACTTACTAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699379 12 + 27742158 AC-----------ACTTACTAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 236698 12 - 4835464 AC-----------AGTTACTAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3695542 12 + 4093027 AC-----------ATTTACTGAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11031742 12 + 30473821 CC-----------ACATATTAAA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16576908 23 + 58134056 tcctgatccctcaacttattaga i canFam3.chr20 C 0 C 0 e proCoq1.NW_012148064v1 566436 681 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e dasNov3.JH563077 1755924 3776 - 2187301 I a score=1187054.000000 s hg38.chrUn_KI270749v1 82783 150 + 158759 AATAAATGAGGttatacattactg--agtggtaatgtaaattgacaaaattttcctgagtaaaatgtggtaaattgcatcaaaagctttaaacatgttaaaaaca-ttgtcccagaaattttacttat--ag----tttcatttaaagaaaatttctat- s panTro5.chr3 201970432 150 - 202621043 AATAAATGAGGttatacattactg--agtggtaatgtaaattgacaaaactttcctgagtaaaatgtggtaaaatgcatcaaaagctttaaacatgttaaaaaca-ttgtcccaggaattttacttat--ag----tttcatttaaagaaaatttctat- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738442 150 - 205426864 AATAAATGAGGttatacattactg--agtggtaatgtaaattgacaaaactttcctgagaaaaatgtggtaaaatgcatcaaaagctttaaacatgttaaaaaca-ttgtcccaggaattttacttat--ag----tttcatttaaagaaaatttctat- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67554963 154 + 86207423 AATAAATGAGGTTATACcgtacagctagtggtaatgtaaattgacaaaactttcctgagtaaaatgtggtaaaatgcatcaaaagctttaaacatgttaaaacca-ctgtcccaggaattttacttatagag----tttcatttaaagaaaatttctat- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041617 154 + 204787373 AATAAATGAgggtatgctatacagctagtggtaatgtaaattgacaaaactttcctgaataaaatgtggcaacatgcatcaaaagctttaaacatgttaaaacca-ttgtcccaggaattttacttatagag----tttcatttaaagaaaatttattt- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973463 154 - 192460366 AATAAATGAGGGTATGCtatacagctagtggtaatgtaaattgacaaaactttcctgaataaaatgtggcaacatgcatcaaaagctttaaacatgttgaaacca-ttgtcccaggaattttacttatagag----tttcatttaaagaaaatttattt- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085420 154 - 17224310 AATAAATGAgggtatgctatacagctagtggtaatgtaaattgacaaaactttcctgaataaaatgtggcaacatgcatcaaaagctttaaacatgttaaaacca-ttgtcccaggaattttacttatagag----tttcatttaaagaaaatttattt- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397608 154 - 41321030 AATAAATGAgggtatgctatacagctagtggtaatgtaaattgacaaaactttcctgaataaaatgtggcaacatgcatcaaaagctttaaacatgttaaaacca-ctgtcccaggaattttacttatagag----tttcatttaaagaaaatttattt- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471264 154 - 101219884 AATAAATGAGGGTATGCtatacagctagtggtaatgtaaaatgacaaaactttcctgaataaaatgtggcaacatgcatcaaaagctttaaacatgttaaaacca-ttgtcccaggaattttacttgtagag----tttcatttaaagaaaatttattt- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853557 154 - 924385 AATAAATGAgggtatgctatacagctagtggtaatgtaaattgacaaaactttcctgaataaaatgtggcaacatgcatcaaaagctttaaacatgttaaaacca-ttgtcccaggaattttacttatagag----tttcatttaaagaaaatttattt- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6697000 154 - 10587913 AATAAATGAgggcatactgtacagctagtggtaatgtaaattgacaaaactttcctgaataaaatgtggcaaaatgcatcaaaagctttaaacatgttaaaacca-ttgtcccaggaattttacttatagag----tttcatttaaagaaaatgtattt- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46016896 146 - 98464013 AGTAAATGAGGGTATACTGcactgctagtggtaatgtaaactgacaacacttc-----------tagagtaaaatgcatcaaaagctttaaacatattaaaacca-ttgg-caaggaattttacttacagagattccttcatttaaataaaatatttat- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699391 146 + 27742158 AGTAAATGAGGATATACTGTactgctagtggtaatgtaaattgacaacacttc-----------tagagtaaagtgcatcaaaagctttaaacatattaaaacca-ttgg-ccaggaattttatttatagagattcattcatttaaataaaatgtttat- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 236710 146 - 4835464 AGTAAATGGGGGTATACTGTactgctagtggtaatgtaaattgacaacaattc-----------tagagtaaaatgtatcaaaagctttaaacatattaaaacca-ttgg-ccaggaattttacttatagagattcattcctttaaagaaaatatttat- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3695554 146 + 4093027 AGTAAATGAGGGTATACTGTactgctagtggtaatgtaaattgacaacacttc-----------tagagtaaaatgcatcaaaagctttaaacatcttaaaacca-ttgg-ccaggaattttacttatagagattcattcatttaaagaaaatatttat- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11031754 155 + 30473821 CATAAATTAGGATACACTGTGctgttagtggtaatgtaatttgataaaa-tttctagaggaaaatgtggcaaagtgcatcaaaagctttaagcagttgaatagcatttggccgaggaattccacttttaggt----attcctgttcaagaaatttccata i otoGar3.GL873534 C 0 C 0 e proCoq1.NW_012148064v1 566436 681 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e canFam3.chr20 16576931 0 + 58134056 C e dasNov3.JH563077 1755924 3776 - 2187301 I a score=2431145.000000 s hg38.chrUn_KI270749v1 82933 218 + 158759 aatgtacacaataattaattacaaatgcatttaatttcattgttgtt-ttgaaacaacctaagtgtacaacaata-ggggattgattaaatgagtaataggaacttcatataTCACAGGGGAATGCCTCCTTCCTCACCTTTGTTTTGTGGCATCCTCCGCAGTCTGCCTGGCTTCCTTTTCCACCACTTCCTCATCCCCAGAGCAGAGGACCACCAGCT s panTro5.chr3 201970582 218 - 202621043 aatgtacacaataattaattacaaatgcatttaatttcattgttgtt-ttgaaacaacctaagtgtacaacaata-ggggattgattaaatgagtaataggaacttcatataTCACAGGGGAATGCCTCCTTCCTCACCTTTGTTTTGTGGCATCCTCCGCAGTCTGCCTGGCTTCCTTTTCCACCACTTCCTCATCCCCAGAGCAGAGGACCACCAGCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738592 218 - 205426864 aatgtacacaataattaattacaaatgcatttaatttcattgttgtt-ttgaaacaacctaagtgtacaacaata-ggggattgattaaatgagtaataggaacttcatataTCACAGGGGAATGCCTCCTTCCTCACCTTTGTTTTGTGGCATCCTCCGCAGTCTGCCTGGCTTCCTTTTCCACCACTTCCTCATCCCCAGAGCAGAGGACCACCAGCT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67555117 218 + 86207423 aatgtacacaataattaattacaaacgcatttaatttcattgttgtt-ttgaaacaacctaagagtacaacaata-ggggattgactaaatgagtaatagGAACTTCACATATCACAGGGGAATGCCTCCTTCCTCACTTCTGTTTTGTGGCATTCTCCACAGTCTGCCTGGCTTCCTTTTCCACCACTTCCTCATCCCCAGAGCAGAGGACCAGCAGCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041771 218 + 204787373 aatgtacacaataattaattacaaaggcatttaatttcattgttgct-ttgaaagaacctaagcgcacaacaata-ggggattgattaaatgagtaataggaaattcacataTCACAGGGGAATGCCTCCTTCCTCACCTTTGTTTTGTAGCATTTTCCACAGTCTGCCTGGCTTCCTTTTCCACCACTTCCTCATCCTTAGAGCAGAGGACAGCCAGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973617 218 - 192460366 aatgtacacaataattaattacaaaggcatttaatttcattgttgct-ttgaaagaacctaagtgcacaacaata-ggggattgattaaatgagtaataggaaattcacataTCACAGGGGAATGCCTCCTTCCTCACCTTTGTTTTGTAGCATTTTCCACAGTCTGCCTGGCTTCCTTTTCCACCACTTCCTCATCCTTAGAGCAGAGGACAGCCAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085574 218 - 17224310 aatgtacacaataattaattacaaaggcatttaatttcattgttgct-ttgaaagaacctaagtgcacaacaata-ggggattgattaaatgagtaataggaaattcacataTCACAGGGGAATGCCTCCTTCCTCACCTTTGTTTTGTAGCATTTTCCACAGTCTGCCTGGCTTCCTTTTCCACCACTTCCTCATCCTTAGAGCAGAGGACAGCCAGGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397762 218 - 41321030 aatgtacacaataattaattacaaaggcatttaatttcattgttgct-ttgaaagaacctaagtgcacaacaata-ggggattgattaaatgagtaataggaaattcacataTCACAGGGGAATGCCTCCTTCCTCACCTTTGTTTTGTGGCATTTTTCACAGTCTGCCTGGCTTCCTTTTCCACCACTTCCTCATCCTTAGAGCAGAGAACAGCCAGCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471418 218 - 101219884 aatgtacacaataattaattacaaaggcatttaatttcattgttgct-ttgaaagaacctaagtgctcaacaata-agggattgattaaatgagtaataggaaatccacataTCACAGGGGAATGCCTCCTTCCTCACCTTTGTTTTGTAGCATTTTCCACAGTCTGCCTGGCTTCCTTTTCCACCACTTCCTCATCCTTAGAGCAGAGGACAGCCAGGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853711 218 - 924385 aatgtacacaataattaattacaaaggcatttaatttcattgttgct-ttgaaagaacctaagtgcacaacaata-ggggattgattaaatgagtaataggaaattcacataTCACAGGGGAATGCCTCCTTCCTCACCTTTGTTTTGTGGCATTTTTCACAGTCTGCCTGGCTTCCTTTTCCATCACTTCCTCATCCTTAGAGCAGAAGACAGCCAGCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6697154 219 - 10587913 aatgtacacaataattaattacaaaggcatttaatttcattgttgctaatgaaagaacctaagtgcacaacaata-ggggatcgattaaatgaggaataggaaattcacataTCACAGGGGAATGCCTCCTTCCTCACCTTTGTTTTGTGGCATTTTCCACAGTCTGCTTGGCTTCCTTTTCCACCATTTCCTCATCCTTAGAGCAGAGGACAGCCAGCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46017042 207 - 98464013 aatgtatacaataattaa-cacaaaggtgtttaattccaatgttgtc-tggaaacaacctatgtgtacaacaata-ggggattggttaaataagtaatagGAACTTCACATATCACAAGGGAGTGCCTCCTTCCTCACC-----TTTGTGGCATTTTCCACAATCTGCCTGGCTTCC-TTTCCACCCCTTCCTCATCCCCAGAGCAGAG----ACCAGAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699537 208 + 27742158 aatgtatagaataattaa-caaaaaggtgtttaattccaacgtggtt-tggaaacaatctatgtgtacaacaatagggggattggttaaataagtaatagAAACTTCACATATCACAAGGGAGTGCCTCCTTCCTCATC-----TTTGTGGCATTTTCCACAATCTGCCTGGCTTCC-TTTCCACCCCTTCCTCATCCCCAGAGCAGAG----ACCAGAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 236856 207 - 4835464 aatgtatacagtcattaa-cacaaaggtgtttaattccaatgttgtt-tggaaacaaccaatgtgtacaaccata-ggggattggttaaataagcaatagaaacttcacatatcacaagggagtgcCTCCTTCCTCACC-----TTTGTGGCATTTTCCACAATCTGCCTGGCTTCC-TTTCCACCCCTTCCTCATCCCCAGAGCAGAG----ACCAGAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3695700 207 + 4093027 aatgtatacaataattaa-cacaaaggtgtttaattccagcgttgtt-tggaaacaacctatgtgtacaacaata-ggggattggttaaataagtaataggaacttcacatatcacaagggagtgcCTCCTTCTTCACC-----TTTGCGGCATTTTCCACAATCTGCCTGGCTTCC-TTTCCACCCCTTCCTCATCCCCAGAGCAGAG----ACCAGAT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 567117 215 + 2414909 aatgtacacaaaaattaatcacaatcgtgtttaattttaatgctgtt-tggaaacaacctaaatgtacaacaata-gtgaattggttaaatgagcaataggaccttcataGGACACAGGGGAATGCCTCTTCTCTTACCTCTGTTTTGTGGGTTTTTCTACAATCTTCTTGGCTTCTTTTCCTACCTCTTCCTCCTCCCCAGAGTTGGGGGCCAGTG--- i proCoq1.NW_012148064v1 I 681 C 0 s eulMac1.LGHX01000499v1 42 215 + 631505 aatgtacacaaaaattaattacaatcatgtttaattgcaatgttgtt-tgggaacaacctaaatgtacaacaaga-gagaactggttaaatgaacaataggaccttcaAAAGACACAGGGGACTGGCTCTTCTCTCACCTCTGATTTGTGGGTTTTTCTACAATCCTCCTGGCTTCTTTTCCCACCTCTTCTTCCTCCCCAGAGTTGGAGGCCAGTG--- i eulMac1.LGHX01000499v1 N 0 I 95 s eulFla1.LGHW01000501v1 89 215 + 635616 aatgtacacaaaaattaattacaatcatgtttaattgcaatgttgtt-tgggaacaacctaaatgtacaacaaga-gagaactggttaaatgagcaataggaccttcaAAAGACACAGGGCACTGGCTCTTCTCTCACCTCTGATTTGTGGGTTTTTCTACAATCCTCCTGGCTTCTTTTCCCACCTCTTCTTCCTCCCCAGAGTTGGAGGCCAGTG--- i eulFla1.LGHW01000501v1 N 0 I 95 s otoGar3.GL873534 11031909 209 + 30473821 aatgtatgcaaagattaattataatcaggtttaatttcaatgttgtt-tggaaatgacttaaatgtccagcaata-gagaattgcttaaatgatcaataggaccttcgtaggacaaaggagAATGCCTCTTCCTTCACC-CTATCTTGTAGGTTTTTCTATAATCCCCCTGGCTTCTTTTCCCACCTCATCCTCCTCCTCAGAGTTTGAGAC-------- i otoGar3.GL873534 C 0 C 0 e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e canFam3.chr20 16576931 0 + 58134056 C e dasNov3.JH563077 1755924 3776 - 2187301 I a score=671576.000000 s hg38.chrUn_KI270749v1 83151 67 + 158759 TTACAGTGGTTGGTG-TGTTACAGGTATTGGGTAGACATGATCAAAGTTTCTCTGCTTGGAGAAGTTG s panTro5.chr3 201970800 67 - 202621043 TTACAGAGGTTGGTG-TGTTACAGGTATTGGGTAGACATGATCAAAGTTCCTCTGCTTGGAGAAGTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738810 67 - 205426864 TTACAGAGGTTGGTG-TGTTACAGGTATTGGGTAGACATGATCAAAGTTCCTCTGCTTGGAGAAGTTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67555335 67 + 86207423 TTACAGTGGTTGGTG-GGTTACAGCTATTGGGTAGACATGATCAAAGTTTCTCTGCTTGGACAAGTTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66041989 67 + 204787373 TTACAGTGGTCGGTG-GGTTACAGGTATTGCGTAGACATGATCAAAGTTCCTCTGCTTGGAGAAGTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973835 67 - 192460366 TTACAGTGGTCGGTG-GGTTACAGGTATTGCGTAGACATGATCAAAGTTCCTCTGCTTGGAGAAGTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085792 67 - 17224310 TTACAGTGGTCGGTG-GGTTACAGGTATTGCGTAGACATGATCAAAGTTCCTCTGCTTGGAGAAGTTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17397980 67 - 41321030 TTACAGTGGTTGGTG-GGTTACAGATATTGGTTAGACATGATCAAAGTTCCTCTGCTTGGAGAAGTTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471636 67 - 101219884 TTACAGTGGTCGGTG-GGTTACAGGTATTGGGTAGACATGATCAAAGTTCCTCTGCTTGGAGAAGGTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853929 67 - 924385 TTACAGTGGTTGGTG-GGTTACAGATATTGGTTAGACATGATCAAAGTTCCTCTGCTTGGAGAAGTTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6697373 67 - 10587913 TCACAGTGGTCGGTG-GGTTACAGGTATTGGGTAGACATGATCAAAGTTCCTCTGCTTGGAGAAGTTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46017249 64 - 98464013 TTACAGTGGTTGGTG-GATTACAGGCATTGTGTAGACATGATCAAAGACTCTCTGCT---TGAAGTTG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699745 67 + 27742158 TGACAGTGGTTGGTG-GGTTACAGGCATTGTGTAGACATGATCAAAGGCTCTCTGCTTGATGAAGTTG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 237063 67 - 4835464 TTACAGTGGTTGGTG-GGTTACAGGCATTGTGTAGACATGATCAAAGATTCTCTGATTGATGAAGTTG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3695907 67 + 4093027 TTACAGTGGTTGGTG-AGTTACAGGCGTTGTGTAGACATGATTAAAGGCTCTCTGCTTGATGAAGTTG i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 567332 67 + 2414909 TTACAGTGGTTGGTG-GGCTACAGGCATTGGGTAGAGATGATCAAAGGCCATCTGCTTGGAGAAGTTG i proCoq1.NW_012148064v1 C 0 I 493 s otoGar3.GL873534 11032118 58 + 30473821 ----------TAGTGTAGTTATAGGCATTGAGTGGAGATGATCAAAGGCCCTCAGCTTGGAGAAGTTG i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 304 95 + 635616 I e eulMac1.LGHX01000499v1 257 95 + 631505 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e canFam3.chr20 16576931 0 + 58134056 C e dasNov3.JH563077 1755924 3776 - 2187301 I a score=233132.000000 s hg38.chrUn_KI270749v1 83218 28 + 158759 CTTCTTTTCTTCTTTCCTCTAGCCAGGG s panTro5.chr3 201970867 28 - 202621043 CTTCTTTTCCTCCTTCCTCTAGCCAGGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738877 28 - 205426864 CTTCTTTTCCTCCTTCCTCTAGCCAGGG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67555402 28 + 86207423 CTTCTTTTCTTCCTTCCTCTAGCCAGGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042056 28 + 204787373 CTTCTTTCCTTCCTTCTTCTATCCAGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973902 28 - 192460366 CTTCTTTCCTTCCTTCTTCTATCCAGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085859 28 - 17224310 TTTCTTTCCTTCCTTCTTCTATCCAGGG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17398047 28 - 41321030 CTTCTTTCCTTCCTTCCTCTATCCAGGG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471703 28 - 101219884 CTTCTTTCCTTCCGTCCTCTATCCAGGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 853996 28 - 924385 CTTCTTTCCTTCCTTCCTCTATCCAGGG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6697440 28 - 10587913 CTTCTTTTCTTCCTTCCTCTATCCAAGG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46017313 28 - 98464013 CTTCTTTTCTTCATTCCTTTCGCCAGGG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699812 28 + 27742158 CTTCTTTTCTTCATTCCTTTTGCCAGGG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 237130 28 - 4835464 CTTCTTTTCTCCATTCCTTTCGCCAGGG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3695974 28 + 4093027 CTTCTTTTCTTCATTCCTTTCACCAGGG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11032176 28 + 30473821 TTCCCTACATCCAATCCTCTAGCCAGAG i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 304 95 + 635616 I e eulMac1.LGHX01000499v1 257 95 + 631505 I e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e canFam3.chr20 16576931 0 + 58134056 C e dasNov3.JH563077 1755924 3776 - 2187301 I a score=30303.000000 s hg38.chrUn_KI270749v1 83246 3 + 158759 CCA s panTro5.chr3 201970895 3 - 202621043 CCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738905 3 - 205426864 CCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67555430 3 + 86207423 CCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042084 3 + 204787373 TCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973930 3 - 192460366 TCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085887 3 - 17224310 TCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17398075 3 - 41321030 TCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471731 3 - 101219884 TCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 854024 3 - 924385 TCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6697468 3 - 10587913 TCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46017341 3 - 98464013 TCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699840 3 + 27742158 TCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 237158 3 - 4835464 TCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3696002 3 + 4093027 TAA i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 352 3 + 631505 CCA i eulMac1.LGHX01000499v1 I 95 I 283 s eulFla1.LGHW01000501v1 399 3 + 635616 CCA i eulFla1.LGHW01000501v1 I 95 I 283 s otoGar3.GL873534 11032204 3 + 30473821 CCA i otoGar3.GL873534 C 0 C 0 e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e canFam3.chr20 16576931 0 + 58134056 C e dasNov3.JH563077 1755924 3776 - 2187301 I a score=2425402.000000 s hg38.chrUn_KI270749v1 83249 263 + 158759 GTGCAGTGCAGGG---------ATTTCCTGCTCCCTGGCTTTAAGCTTTCCCTGAAGTGG-GTTCTTCTCACAGCTCAACAAACTTCCAAgggatgcagtgagcaagccaattgtttctctcattgtaagctgtgcctgccaattgtgccttaattaggaat-agggtgatattctggttctccacttgctgtctatttttcaattgaattggg---tagaaaagacaggtgctacttactgag--------tgctctcaaagaccctcaaAAACACTGAGGAGA s panTro5.chr3 201970898 263 - 202621043 GTGCAGGGCAGGG---------ATTTCCTGCTCCCTGGCTTTAAGCTTTCCCTGAAGTGG-GTTCTTCTCACAGCTCAACAAACTTCCAAgggatgcagtgagcaagccaattttttctctcattgtaagctgtgcctgccaattgtgccttaattaggaat-agggtgatattctggttctccacttgctgtctatttttcaattgaattggg---tagaaaagacaggtgctacttactgag--------cgctctcaaagaccctcaaAAACACTGAGGAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204738908 263 - 205426864 GTGCAGGGCAGGG---------ATTTCCTGCTCCCTGGCTTTAAGCTTTCCCTGAAGTGG-GTTCTTCTCACAGCTCAACAAACTTCCAAgggatgcagtgagcaagccaattttttctctcattgtaagctgtgcctgccaattgtgccttaattaggaat-agggtgatattctggttctccacttgctgtctatttttcaattgaattggg---tagaaaagacaggtgctacttactgag--------cgctctcaaagaccctcaaAAACACTGAGGAGA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67555433 263 + 86207423 GTGCAGGGCAGGG---------ATTTCCTGCTGCCTGGCTTTAAGCTTTCCCTGAAGTGG-GTTCTTCTCACAGCTCAACAAACTTCCAAgggatgcagtgagcaagcccactttttctctcattgtaagctgtgcctgccaattgtgccttaattaggaat-aggttgatattctggttctccacttgctgtctatttttcaattgaattggg---tagaaaagacaggtgctacctactgag--------tgctctcaaaGACCCTCAGAAATACTGAGGAGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042087 264 + 204787373 GTGCAGGGCAGGG---------ATTGCCTGCTCCCTGGCTTTAAGCTTTCCCCGAAGTGGTTTTTTTCTCACAGCTCAACAAACTTCCAAGGGAGGCAGTGAGCAAGCCCATTTTTTCTCTCATTGTAAGCTGTGCCTGACAATTGTgcattaattaggaat-agggtaataatctgtttctccacttgctgtctatttttcaattgaattggg---tagaaaagacaggtgctacttattgag--------cactctcaaagaccctcaaAAACACTGAGGAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60973933 263 - 192460366 GTGCAGGGCAGGG---------ATTGCCTGCTCCCTGGCTTTAAGCTTTCCCCGAAGTGG-TTTTTTCTCACAGCTCAACAAACTTCCAAGGGAGGCAGTGAGCAAGCCCATTTTTTCTCTCATTGTAAGCTGTGCCTGACAATTGTgcattaattaggaat-agggtaataatctgtttctccacttgctgtctatttttcaattgaattggg---tagaaaagacaggtgctacttattgag--------cactctcaaagaccctcaaAAACACTGAGGAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11085890 263 - 17224310 GTGCAGGGCAGGG---------ATTGCCTGCTCCCTGGCTTTAAGCTTTCCCCGAAGTGG-TTTTTTCTCACAGCTCAACAAACTTCCAAGGGAGGCAGTGAGCAAGCCCATTTTTTCTCTCATTGTAAGCTGTGCCTGACAATTGTgcattaattaggaat-agggtaataatctgtttctccacttgctgtctatttttcaattgaattggg---tagaaaagacaggtgctacttattgag--------cactctcaaagaccctcaaAAACACTGAGGAGA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17398078 263 - 41321030 GTGCAGGGCAGGG---------ATTGCCTGCTCCCTGGCTTTAAGCTTTCCCCCAAGTGG-GTTCTTCTCACAGCTCAACAAACTTCCAAgggatgcagtgagcaagcccattttttctctcattgtaagctgtgcctgacaattgtgcattaattaggaat-agggtaataatctggttctccacttgctgtctatttttcaattgaattggg---tagaaaagacaggtgctacttattgag--------cactctcaaagaccctcaaAAACACTGAGGAga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471734 263 - 101219884 GTGCAGGGCAGGG---------ATTGCCTGCTCCCTGGCTTTAAGCTTTCCCCAAAGTGG-GTTCTTCTCACAGCTCAACAAACTTCCAAGGGAGGCAGTGAGCAAGCCCATTTTTTCTCTCATTGTAAGCTGTGCCTGACAATTGTgcattaattaggaat-agggtaataatctggttctccacttgctgtctatttttcaattgaattggg---tagaaaagacaggtgctacttattgag--------cgctctcaaagaccctcaaAAACACTGAGGAGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 854027 263 - 924385 GTGCAGGGCAGGG---------ATTGCCTGCTCCCTGGCTTTAAGCTTTCCCCCAAGTGG-GTTCTTCTCACAGCTCAACAAACTTCCAAgggatgcagtgagcaagcccattttttctctcattgtaagctgtgcctgacaattgtgcattaattaggaat-agggtaataatctggttctccacttgctgtctatttttcaattgaattggg---tagaaaagacaggtgctacttattgag--------tgctctcaaagaccctcaaAAACACTGAGGAGA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6697471 263 - 10587913 GTGCAGGGCAGGG---------ATTGCCTGCTCCCTGGCTGTAAGCTTTCCCCGAAGTGG-GTTCTTCTCACAGCTCAACAAACTTCCAAGGGATGGAGTGAGCAAGCCCATTTTTTCTCTCATTGTAAGCTGTGCCTGACAATTGTgcattaattaggaat-agggtaataatctggttctccacttgctgtctatttttcaattgaattggg---tagaaaagacaggtgctgcttattgag--------ccctctcaaagaccctcaaAAACACTGAGGAGA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46017344 259 - 98464013 ATGCAGGGCAGAG---------ACTGCCTGCTCTGTGGCTTTAAGCTTTCCCTGAAGTGA-GTTCTTCTCACAGCTCAACAAACTTCCAAGGGATGCAGTTAGCAAGCTCATCTTTTCTCTCACTGTAAGCTGTGCCTTACAAGTGTGCCTTAATTACaa-----ggtgctattccggttctctgcttgctgtctatttttcaattgagttggg---tggaaaagacaggtgctacttattgag--------tgctctccaagatcctcaaAAACACTGAGTAGA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27699843 263 + 27742158 ATGCAGGGCAGAG---------ACTGCCTGCTCTGTGGCTTTAAGCTTTCCCTGAAGTGG-GCTCTTCTCATAGCTCAACAAACTTCCAAgggatgcagttagcaagcccatcttttctctcattgtaagctgtgccttccaagtgtgccataattaggagt-tgggtgctattccagttctccgcttgctgtctatttttcaattgagttggg---tggaaaagacaggtgctacttattgag--------tgctctcaaagatcctcaaAAACACTGAGGAga i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 237161 263 - 4835464 ATGCAGGGCAGAG---------ATTGCCTGCTCTGTGGCTTTAAGCTTTCCCTGAAGTGG-GTTCTTCTCACAGCTCAACAAACTTCCAAgggatgcagttagcaagcccatcttttctctcattgtaagctgtgccttccaagtgtgccttaattaggagt-tgggtgctattccggttctttgcttgctgtctattttccaactgagttgtg---cggaaaagacaggtgctacttattgag--------tgctctcaaagatcctcaaAAACACTGAGTAGA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3696005 263 + 4093027 ATGCAGGACAGAG---------ATTGCCTGCTCTGTGACTTTATGCTTTCCCTGAAGTGG-GTTATTCTCACAGCTCAACAAACTTCCAAgggatgcagttagcaagcccatcttttctctcattgtaagctgtgccttccaagtgtgccttaattaggagt-tgggtgctattccggttctccgcttgcagtctatttttcaattgagttggg---tggaaaagacaggtgctacttattgag--------tgctctcaaagatcctcaaAAACACTGagtaga i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11032207 282 + 30473821 ATGTGAAGCCGAGGCCTAGTGAATCGTTTGCTCTTTTGACCTAAACTTTCTCTGAAGTGC-GTTCTTAGGACACCTCAGCAGACTTCCAAGGTTCATGGTTAGCAAGCCC--TCTGTCTCTCATTGTGAACGATGCCTTTCAATCATGTAATAATTAGGAATGAGGATAAGATTTTAGTTCCCCATCTGCTAGCTATCCCCTAATTGAGTTGGGATAAGGAGGAGACCCATGTGACTTATTGAACTCCCCTTCTCTCTCAAAGACCCTCAGAAATAGGGAGTAGA i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 402 283 + 635616 I e eulMac1.LGHX01000499v1 355 283 + 631505 I e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e canFam3.chr20 16576931 0 + 58134056 C e dasNov3.JH563077 1755924 3776 - 2187301 I a score=2019678.000000 s hg38.chrUn_KI270749v1 83512 247 + 158759 ATATTATAGCCATCATATCCATATAGACATATGAAAAATAACATACTTATGGTTGGAAAAGATCATGACATTTTAAGGCAAAAAAGCAGGTTACACAAAAATGTGTAATACACAGTTAAGAAAACTGGGGGGATAGCAATACATTGTGTTTATTTTTCTCTTGCTTATTCTGCATTCTCTAAAT-TTTTCTACAAATATTTGTGTTGTtaaaaataagaataaaaacctatatttaacaaaacaatac s panTro5.chr3 201971161 235 - 202621043 ATATTATAGCCATTAAAACT-----GACATATGAAAAATAACATACTTATGGTTGGAAAAGGTCATGACATTTTAAAGCAAAAAAGCAGGTTACACAAAAATGCATAATACACAGTTAAGAAAACTGGGGGGATAGCAA-------TGTTTATTTTTCTCTTGCTTATTCTGCATTCTCTAAAT-TTTTCTACAAATATTTGTGTTGTtaaaaataagaataaaaatctatatttaacaaaacaatac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739171 235 - 205426864 ATATTATAGCCATTAAAACT-----GACATATGAAAAATAACATACTTATGGTTGGAAAAGGTCATGACATTTTAAAGCAAAAAAGCAGGTTACACAAAAATGCGTAATACACAGTTAAGAAAACTGGGGGGATAGCAA-------TGTTTATTTTTCTCTTGCTTATTCTGCATTCTCTAAAT-TTTTCTACAAATATTTGTGTTGTTAAAAATAAGAATAAAAATCTGTATTTAACAAAACAATAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67555696 242 + 86207423 ATATTATAGCCATTAAAACT-----GACATATGAAAAATAACATACTTATGGTTGGAAAAGGTCATGACATTTTAAAGCAAAAAAGCAGGTTACACAAAAATATGTAATACATAGTTCAGAAAACTAGGGGGATAGCAATACATTGTGTTTATTTTTCTCTTGCTTATTCTGCATTCTCCAAAT-TTTTCTACAAATATCTGTGTTGTTAAAAATAAGAATAAAAATCTATATTTAACAAAACAATAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042351 236 + 204787373 ATATTATAACCATTAAAACT-----GACATATAAAA------ATACTTATGGCTGGAAAAGGTCATGACATTTTAAAGCAAAAAAGCAGGTTACACAAAAATATGTAATACATAGTTAAGAAAACTGGGGGGATAGCAATACATTGTGTTTATTTTTCTCTAGCTTATTCTGCATTCTCTAAAT-TTTTCTACAAATATTTATATTGTTAAAAATAAGAATAAAAATCTATATTTAACAAAACAATAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60974196 236 - 192460366 ATATTATAACCATTAAAACT-----GACATATAAAA------ATACTTATGGCTGGAAAAGGTCATGACATTTTAAAGCAAAAAAGCAGGTTACACAAAAATATGTAATACATAGTTAAGAAAACTGGGGGGATAGCAATACATTGTGTTTATTTTTCTCTAGCTTATTCTGCATTCTCTAAAT-TTTTCTACAAATATTTATATTGTtaaaaataagaataaaaatctatatttaacaaaacaatac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11086153 236 - 17224310 ATATTATAACCATTAAAACT-----GACATATAAAA------ATACTTATGGCTGGAAAAGGTCATGACATTTTAAAGCAAAAAAGCAGGTTACACAAAAATATGTAATACATAGTTAAGAAAACTGGGGGTATAGCAATACATTGTGTTTATTTTTCTCTAGCTTATTCTGCATTCTCTAAAT-TTTTCTACAAATATTTATATTGTtaaaaataagaataaaaatctatatttaacaaaacaatac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17398341 236 - 41321030 atattataaccattaaaact-----gacatataaaa------atacttatggctggaaaaggtcatgacattttaaagcaaaaaagcaggttacacaaaaatatgtaatacacagtTAAGAAAACTGGGGGGATAGCAATACATTGTGTTTATTTTTCTCTTGCTTATTCTGCATTCTCTAAAT-TTTTCTACAAATATTTATATTGTtaaaaataagaataaaaatctatatttaacaaaacaatac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64471997 236 - 101219884 ATATTATAACCATTAAAACT-----GACATATGAAA------ATACTTATGGCTGGAAAAGGTCATGACATTTTAAAGCCAAAAAGCAGGTTACACAAAAATATGTAATACACAGTTAAGAAAACTGGGAGGATAGCAATACATTGTGTTTATTTTTCTCTTGCTTATTCTGCATTCTCTAAAT-TTTTCTACAAATATTTATATTGTTAAAAATAAGAAGAAAAATCTATATTTAACAAAACAATAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 854290 236 - 924385 ATATTATAACCATTAAAACT-----GACATATGAAA------ATACTTATGGCTGGAAAAGGTCATGACATTTTAAAGCAAAAAAGCAGGTTACACAAAAATATGTAATACACAGTTAAGAAAACTGGGGGGATAGCAATACATTGTGTTTATTTTTCTCTTGCTTATTCTGCATTCTCTAAAT-TTTTCTACAAATATTTATATTGTtaaaaataagaataaaaatctatatttaacaaaacaatac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6697734 236 - 10587913 ATATTATAACCATTAAAACT-----GACATAGGAAA------ATACTTATGGCTGGAAAAGGTCATGACATTTTAAAGCAAAAAAGCAAGTTACACAAAAATATGTAATACATAGTTAAGAAAACTGGGGGGATAGCAATACATTGTGTTTATTTTTCTCTTGCTTATTCTGCATTCTCTAAAT-TTTTCTACAAATATTTATATTGTTAAAAATAAGAATAAAAATCTATATTTAACAAAACAGTAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46017603 237 - 98464013 ATATTAAAGCCATTAAAACT-----GACATCGGAAA------ATACTTATGGTTGGAAAAAGTCATGACATTTTGAAGCAAAAAAGCAGGTTAAACAAAAATATGTAATACATAGCTAAGAAAACTGGGGGAATAGCAATATATTGTGTTTATTTTCCTCTTGCTTATTCTGGATTCTCTAAATGTTTTCTACACATATTTGTGTTGTTAAAACTAAGAATAAAAATCTATATTTAACAAAACAATAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700106 237 + 27742158 atattatagccattaaaact-----gacatcggaaa------atacttatggttggaaaaagtcatgacattttgaagcaaaaaagcaggttaaacaaaaatatgtaatacaTAGCTAAGAAAACTGGGGGAATAGCAATATATTGTGTTTATTTTCCTCTTGCTTATTCTGCATTCTCTAAATGTTTTCTGCACATATTTGTGTTGTTAAAACTAAAAATAAGAATCTATATTTAACAAAACAATAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 237424 237 - 4835464 ATATTATAGCCATTAAAACT-----GACATCGGAAA------ATACTTATGGTTGGAAAAAGTCATGACATTTTGAAGCAAAAAAGCAGGTTAAATAAAAATATGTAATACGTAGCTAAGAAAACTGGGGGAATAGCAATATATTGTGTTTATTTTCCTCTTGCTTATTCTGCATTCTCTAAATGTTTTCTAAACATATTTGTGTTGTTAAAACTAAGAATAAAAATCTGTCTTTAACAAAACAATAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3696268 237 + 4093027 atattacagccattaaaact-----gatattagaaa------atacttatggctggaaaaagtcatgacattttgaagcaaaaaagcaggttaaacaaaaatatgtaATACGTAGCTAAGAAAACTGGGGGAATAGCAATATATTGTGTTTATTTTCCTCTTGTTTATTCTGCATTCTCTAAATGTTTTCTACACGTATTTGTGTTGTTAAAACTAAGAATAAAAATCTATATTTAACAAAACAATAC i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 402 283 + 635616 I e eulMac1.LGHX01000499v1 355 283 + 631505 I e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e otoGar3.GL873534 11032489 0 + 30473821 C e canFam3.chr20 16576931 0 + 58134056 C e dasNov3.JH563077 1755924 3776 - 2187301 I a score=1408353.000000 s hg38.chrUn_KI270749v1 83759 169 + 158759 aataaaGGAGGAGAGTTTATTTAACTT-TATGAGTCTCAG-TTTTCTCCTCCCCTAAAATCCAA-----AATAACCCTCTTTGGGTTTTTGCAAAGACTTCATTGACTGATCTATGAAAAAGGGCTTGCAATTGTGTGCGTCATAGGTAGTG--------------------ATCTGTTTTAAACTT--TCAGTCTCA s panTro5.chr3 201971396 169 - 202621043 aataaaGGAGGAGAGTTTATTTAACTT-TATGAGTCTCAG-TTTTCTCCTCCCCTAAAATCCAA-----AATAACCCTCTTTGGGTTTTTGCAAAGACTTCATTGACTGATCTATGAAAAAGGGCTTGCAATTGTGTGCGTCATAGGTAGTG--------------------ATCTGTTTTAAACTT--TCAGTCTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739406 169 - 205426864 AATAAAGGAGGAGAGTTTATTTAACTT-TATGAGTCTCAG-TTTTCTCCTCCCCTAAAATCCAA-----AATAACCCTCTTTGGGTTTTTGCAAAGACTTCATTGACTGATCTATGAAAAAGGGCTTGCAATTGTGTGCATCATAGGTAGTG--------------------ATCTGTTTTAAACTT--TCAGTCTCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67555938 169 + 86207423 AATAAAGGAGGAGAGTTTATTTAACTT-TATGAGTCTCAG-TTTTCTCCTCCCCTAAAATCCAA-----AACAACCCTCTTTGGGTTTTTGCAAAGACTTCATTGACTGATCTATGAAAAAGGGCTTGCAATTGTGTGCGTCATAGGTAGTG--------------------ATCTGTTTTAAACTT--TCAGTGTCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042587 169 + 204787373 AATAAAGGCGGAGAGTttatttaactt-tatgagtctcag-ttttttcctcccctaaaatccaa-----aataaccctctttgggtttttgtgaagacttcattgactgatctatgaaaaaaggtttgcaATTGTGTGCGTCATAGGAGGTG--------------------ATCTGTTTTGAACAT--GGAGTCTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60974432 169 - 192460366 aataaaGGCGGAGAGTTTATTTAACTT-TATGAGTCTCAG-TTTTTTCCTCCCCTAAAATCCAA-----AATAACCCTCTTTGGGTTTTTGTGAAGACTTCATTGACTGATCTATGAAAAAAGGTTTGCAATTGTGTGCGTCATAGGAGGTG--------------------ATCTGTTTTGAACAT--GGAGTCTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11086389 169 - 17224310 aataaaGGCGGAGAGTttatttaactt-tatgagtctcag-ttttttcctcccctaaaatccaa-----aataaccctctttgggtttttgtgaagacttcattgactgatctatgaaaaaaggtttgcaattgtgtgcgtcataggaggtg--------------------atcTGTTTTGAACAT--GGAGTCTCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17398577 171 - 41321030 aataaaGGAGGAGAGTttatttaactt-tatgagtctcag-tttttccctcctctaaaatccaa-----aataaccctctttgggtttttgtgaagacttcattgacagatctatgaaaaaaggtttgcaATTGTGTGCATCATAGGAGGTG--------------------ACCTGTTTTGAACATTGAGAGTCTCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64472233 171 - 101219884 AATAAAGGAGGAGAGTTTATTTAACTT-TATGAGTCTCAG-TTTTTCCCTCCCCTAAAATCCAA-----AATAACCCTCTTTGGGTTTTTGTGAAGACTTCATTGACAGATCTATGAAAAAAGGTTTGCAATTGTGTGCGTCATAGGAGGTG--------------------ATCTGTTTTGAACATTGAGAGTCTCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 854526 171 - 924385 aataaaGGAGGAGAGTttatttaacct-tatgagtctcag-tttttccctcctctaaaatccaa-----agtaaccctctttgggtttttgtgaagacttcattgacagatctatgaaaaaaggtttgcaATTGTGTGCGTCATAGGAGGTG--------------------ACCTGTTTTGAACATTGAGAGTCTCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6697970 170 - 10587913 AATAAAGGAGGAGAGCTTATTTAACTT-TATGAGTCTCAGTTTTTTTCCTCCCCTAAAATCCAA-----AGTAACCTTCTTTGGGTTTTTGTGAAGACTTCATTGACTGATCTATGAAAAAAGGTTTGCGATTGTGTGCGTCATAGCAGGTG--------------------ATCTGTTTTGAACAT--TGAGTCTCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46017840 167 - 98464013 AATAAAAGAGAAGGGTTTA-TTAACTT-AAtgagtctcag-ttttct-ctcctgtaaaatccaa-----aataaccctctttggatttttgtgaagatttcattcactgattcatgaaaaagggcttgcaATTTTGTGCATCATAGGTAGTG--------------------ATCTGTTTTAAACTT--TGACTCTCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700343 167 + 27742158 AATATAAGAGAAGagttta-ttaactt-tatgagtctcag-ttttct-ctcctgcaaaattcaa-----aataaccctctttggatttttgtgaagatttcattcactgattcatgaaaaggagcttgcaattgtgtgcatcataggtagta--------------------atctgttttaaactt--tgactctca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 237661 167 - 4835464 AATAAAAGAGAAGaattta-ttaactt-tatgagtctcag-ttttct-ctcctgtaaaatccaa-----aataaccctctttgggtttttgtgaagatttcattcactgattcatgaaaaagggcttgcaattgtgtgcatcatagGTAGTG--------------------ACCTGTTTTAAACTT--TGACTCTGA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3696505 165 + 4093027 AATAAAAGAGAAGAGTTTA-TTAACTT-TATGAGTCT--G-TTTTCT-CTCCTGTAAAATCCAA-----AATAACCCTCTTTGTATTTTTATGAAGATTTCATTCACTGATTCATGAAAAAGGGCTTGCAGTTGTATGCATCATAGGTAGTT--------------------ATCTGTTTTAAACTT--TGACTCTCA i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16576931 192 + 58134056 aataaactgggggaa-ttatttaacctatgtgggcttcat-ttttct-cctctgtaaaatgtaaacaatagaaatcctcactgaattattttgaggactttattgattgatttatgaaaa-gggctcagaatagtgtatggtatgtatagtgatctacaaattttaactattatCTGTTTTACATTT--TGGCTCTCA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 402 283 + 635616 I e eulMac1.LGHX01000499v1 355 283 + 631505 I e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e otoGar3.GL873534 11032489 0 + 30473821 C e dasNov3.JH563077 1755924 3776 - 2187301 I a score=905070.000000 s hg38.chrUn_KI270749v1 83928 136 + 158759 TTTTATAACTATAATTTTGATA---CCTTCCCA----ACTTGGC-----CTAGTTATAGTGTAAAAACTATAGATTCCTTTTCA---------TTAATTTTAGTAGTCACTACCACTTTAGTATCAATTATA----------------CAAGTGCAAAACAAAAACAAAAAAT s panTro5.chr3 201971565 136 - 202621043 TTTTATAACTATAATTTTGATA---CCTTCCCA----ATTTGGC-----CTAGTTATAGTGTAAAAACTATAGATTCCTTTTCA---------TTAATTTTAGTAGTCACTACCACTTTAGTATCAATTGTC----------------CAAGTGCAAAACAAAAACAAAAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739575 136 - 205426864 TTTTATAACTATAATTTTGATA---CCTTCCCA----ATTTGGC-----CTAGTTATAGTGTAAAAACTATAGATTCCTTTTCA---------TTAATTTTAGTAGTCACTACCACTTTAGTATCAATTATC----------------CAAGTGCAAAACAAAAACAAAAAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556107 136 + 86207423 TTCTATAACTATAATTTTGATA---CCTTCCCA----ATTTGGC-----CTAGTTATAGTGTAAAAACTACAGATTTCTTTTCA---------TTAATTTTAGTAGTCACTACCACTTTAGTATCAATTATC----------------CAAGTGCAAAACAAAAACAAAAAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042756 94 + 204787373 TTTTATAACTATAATTTCGATA------------------------------------------------------CCTTCCCA---------TTAACTTTGGTAGTCACTACCACTTTAGTGTCAATTATC----------------TAAGTGCAAAACAAAGCCAAAAAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60974601 94 - 192460366 TTTTATAACTATAATTTCGATA------------------------------------------------------CCTTCCCA---------TTAACTTTGGTAGTCACTACCACTTTAGTGTCAATTATC----------------TAAGTGCAAAACAAAGCCAAAAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11086558 94 - 17224310 TTTTATAACTATAATTTCGATA------------------------------------------------------CCTTCCCA---------TTAACTTTGGTAGTCACTACCACTTTAGTGTCAATTATC----------------TAAGTGCAAAACAAAACCAAAAAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17398748 136 - 41321030 TTTTATAACTGTAATTTCGATA---CTTTCTCA----ATTTGGC-----TTAGTTATCATGTAAAAACTATAGATTCCTTTTCA---------TTAACTTTGGTCGTCACTACCACTTTAGTGTCAATTATC----------------TAAGTGCAAAACAAAGCCAAAAAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64472404 136 - 101219884 TTTTATAACTATAATTTCGATA---CTTTCCCA----ATTTGGC-----TTAGTTATAGTGTAAAAACTATAGATTCCTTTTCA---------TTAACTTTGGTAGTCACTACCACTTTAGTGTCAATTATC----------------TAAGTGCAAAACAAAGCCAAAAAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 854697 136 - 924385 TTTTATAACTGTAATTTCGATA---CTTTCCCA----ATTTGGC-----TTAGTTATCGTGTAAAAACTATAGATTCCTTTTCA---------TTAACTTTGGTAGTCACTACCACTTTAGTGTCAATTATC----------------TAAGTGCAAAACAAAGCCAAAAAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6698140 136 - 10587913 TTTTATAACTATAATTTCGATA---CCTTCCCA----ATTTGGC-----CTAGTTATAGTGTAGAAACTATAGATTCCTTTTCA---------TTAATTTTGGTAGTCACTACCACTTTAGTGTCAATTATC----------------TAAGTGCAAAACAAAGCCAAAAAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018007 118 - 98464013 TTTTATATCTATAATTTTGATA---CCTTCCCA----ATTTGGC-----C----TATAGTGTAGAAACTATAGATTCCTTTTCA---------TTAATTTTAGTAGTTACTATG-CTTTAG-------TACC----------------CAAGTACAAAAC------AAAAAAT i calJac3.chr15 C 0 I 5 s saiBol1.JH378125 27700510 131 + 27742158 ttTTATATCTGTAATTTTGATA---CCTTCCCA----ATTTGGC-----CTAGTTATAGTGTATAAACTATGGATTCCTTTTCA---------TTAATTTTAGTAGTTACTATGACTTTAGTATCAATTATC----------------TAAGTACAAAACA-----AAAAAAT i saiBol1.JH378125 C 0 I 5 s cebCap1.NW_016107467v1 237828 130 - 4835464 TTTTATATCTATAATTTTGATA---TCTTCCCA----ATTTGGC-----CTAGTTATAATGTAGAAACTATAGATTTCTTTTCA---------TTAATTTTAGTAGTTACTACAGCTTTAATATCAAATGTC----------------CAAGTACAAAAC------AAAAAAT i cebCap1.NW_016107467v1 C 0 I 5 s aotNan1.NW_018502033v1 3696670 130 + 4093027 TTTTATATCTGTAATTTTGATA---CCTTCCCA----ATTTGGC-----CTAGTTATAGTGTAGAAACTATAGATTCCTTTTCA---------TTAATTTCAGTAGTTACTACCACTTTAGTATCAATTATC----------------CAAGTACAAAAC------AAAAAAT i aotNan1.NW_018502033v1 C 0 I 5 s canFam3.chr20 16577123 155 + 58134056 TT-TGCAACTATAACTCTGGTA---TCTTCCCT----ACTTGGCTATTTCTATCATCTGTGCAAAACCAGTAACTCCCTTTTCA---------TTAGTTTTAGTATACACTACTACTTTACTACCAATTAACAATGTCCACAAAAGAGAAAATGCCAAACATGATTAAAGAC- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1759700 159 - 2187301 TCCTATAATTA-GATTTCTATATGACCTTTCCATCCTGCTTAGT-----CTAATTTGAGCTCCAGGAATATTTATTCACATATAACTGCATATTTAATTTT--------CAACAACTTTACTATCAATTCTCTATGTGTGCAAAGGAGAAAATGCAAAACATGAATAAAGACC i dasNov3.JH563077 I 3776 I 4 e eulFla1.LGHW01000501v1 402 283 + 635616 I e eulMac1.LGHX01000499v1 355 283 + 631505 I e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1208678 1565 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e otoGar3.GL873534 11032489 0 + 30473821 C a score=57493.000000 s hg38.chrUn_KI270749v1 84064 5 + 158759 CGTTA s panTro5.chr3 201971701 5 - 202621043 CGTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739711 5 - 205426864 CGTTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556243 5 + 86207423 CTTTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042850 5 + 204787373 CTTTA i rheMac8.chr2 C 0 I 5 s macFas5.chr2 60974695 5 - 192460366 CTTTA i macFas5.chr2 C 0 I 5 s macNem1.NW_012018021v1 11086652 5 - 17224310 CTTTA i macNem1.NW_012018021v1 C 0 I 5 s cerAty1.NW_012009469v1 17398884 5 - 41321030 CTTTA i cerAty1.NW_012009469v1 C 0 I 5 s chlSab2.chr22 64472540 5 - 101219884 CTTTA i chlSab2.chr22 C 0 I 5 s manLeu1.NW_012098965v1 854833 5 - 924385 CTTTA i manLeu1.NW_012098965v1 C 0 I 5 s colAng1.NW_012114711v1 6698276 5 - 10587913 CTTTA i colAng1.NW_012114711v1 C 0 I 5 s rhiBie1.NW_016820128v1 1210243 5 - 2311269 CTTTA i rhiBie1.NW_016820128v1 I 1565 I 178 s calJac3.chr15 46018130 5 - 98464013 CTTTA i calJac3.chr15 I 5 C 0 s saiBol1.JH378125 27700646 5 + 27742158 CTTTA i saiBol1.JH378125 I 5 C 0 s cebCap1.NW_016107467v1 237963 5 - 4835464 CTTTA i cebCap1.NW_016107467v1 I 5 C 0 s aotNan1.NW_018502033v1 3696805 5 + 4093027 TTTTA i aotNan1.NW_018502033v1 I 5 C 0 s canFam3.chr20 16577278 5 + 58134056 CTTTG i canFam3.chr20 C 0 I 13 s dasNov3.JH563077 1759863 5 - 2187301 CTTTA i dasNov3.JH563077 I 4 C 0 e eulFla1.LGHW01000501v1 402 283 + 635616 I e eulMac1.LGHX01000499v1 355 283 + 631505 I e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e otoGar3.GL873534 11032489 0 + 30473821 C a score=776706.000000 s hg38.chrUn_KI270749v1 84069 84 + 158759 --------TTCAATTGCCTGCTGCCAATATTGG-TGAGATATTTGA--------CCTCTAGGCTCAAGTATGATT-TTGTTTCATAACA---ACAGTATTCAAA--A s panTro5.chr3 201971706 84 - 202621043 --------TTCAATTGCCTGCTGCCAATATTGG-TGAGATATCTGA--------CCTCTAGGCTCAAGTATGATT-TTGTTTCATAACA---ACAGTATTCAAA--A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739716 84 - 205426864 --------TTCAATTGCCTGCTGCCAATATTGG-TGAGATATCTGA--------CCTCTAGGCTCAAGTATGATT-TTGTTTCATAACA---ACAGTATTCAAA--A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556248 84 + 86207423 --------TTCCATTGCTTGCTGCCAATATTGC-TGAGATATTTGA--------CCTCTAGGCTCAACTATGATT-TTGTTTCATAACA---ACAGTATTCAAA--A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042860 83 + 204787373 --------TTCCATTGCTTGCTGCCAATATTGG-TGAGATATTTGA--------CCTCTAGGTTCAAGTATGATT-TTGTTTCATAACA---CTAGTATTC-AA--A i rheMac8.chr2 I 5 C 0 s macFas5.chr2 60974705 84 - 192460366 --------TTCCATTGCTTGCTGCCAATATTGG-TGAGATATTTGA--------CCTCTAGGTTCAAGTATGATT-TTGTTTCATAACA---ATAGTATTCAAA--A i macFas5.chr2 I 5 C 0 s macNem1.NW_012018021v1 11086662 84 - 17224310 --------TTCCATTGCTTGCTGCCAATATTGG-TGAGATATTTGA--------CCTCTAGGTTCAAGTATGATT-TTGTTTCATAACA---ATAGTATTCAAA--A i macNem1.NW_012018021v1 I 5 C 0 s cerAty1.NW_012009469v1 17398894 84 - 41321030 --------TTCCACTGCTTGCTGCCAATATTGG-TGAGATATTTGA--------CCTCTAGGTTCAAGTATAATT-TTGTTTCATAACA---ATAGTATTCAAA--A i cerAty1.NW_012009469v1 I 5 C 0 s chlSab2.chr22 64472550 84 - 101219884 --------TTCCATTGCTTGCTGCCAATATTGG-TGAGATATTTTA--------CCTCTAGGCTCAAGTATAATT-TTGTTTCATAACA---ATAGTATTCAAA--A i chlSab2.chr22 I 5 C 0 s manLeu1.NW_012098965v1 854843 84 - 924385 --------TTCCATTGCTTGCTGCCAATATTGG-TGAGATATTTGA--------CCTCTAGGTTCAAGTATAATT-TTGTTCCATAACA---ATAGTATTCAAA--A i manLeu1.NW_012098965v1 I 5 C 0 s colAng1.NW_012114711v1 6698286 84 - 10587913 --------TTCCATTGCTTGCTGCCAATATTGG-TGAGATATTTGA--------CCTCTAGGCTCAAGTATGATT-TTGTTTCATAACA---ATAGTATTCAAA--A i colAng1.NW_012114711v1 I 5 C 0 s calJac3.chr15 46018135 83 - 98464013 --------TTCCATTGTTTGTTGCCAATATTGG-TGAGATATTTGA--------CCTCTAGGCCCAAGTATGATT-TTGTTTCATGACA---ATAGTATTCAAA--- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700651 83 + 27742158 --------TTCCATTGTTTGTCGCCAATATTGG-TGAGATATTTGA--------CCTCTAGGCCCAAGTATGATT-TTGTTTCATGACA---ATAGTATTCAAA--- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 237968 84 - 4835464 --------TTCCATTGTTTGTTGCCAATATTGG-TGAGATATTTGA--------CCTCTAGGCCCAAGTATGATT-TTGTTTCATGACA---ATAGCATTCAAAA-- i cebCap1.NW_016107467v1 C 0 I 21 s aotNan1.NW_018502033v1 3696810 84 + 4093027 --------TTCCATTGTTTGTTGCCAATATTGG-TGAGATATTTGA--------CCTCTAGGCCCAAGTATGATT-TTGTTTCATGACA---ATAGTATTCAAA-A- i aotNan1.NW_018502033v1 C 0 I 21 s canFam3.chr20 16577296 80 + 58134056 --------TTCCATTGCTTGCTGCTAACCTTG-----GATATTTGA--------CTTCTACACCC-AGTATGATTGTTTTCTCACAGAA---ATACCATTCAAA--A i canFam3.chr20 I 13 I 2 s dasNov3.JH563077 1759868 105 - 2187301 TTCCATGACTCCATACTTTGTCACCAATGCTGGATGAGATACGTAATCATCATGCCTTCATGCCCAACTTTGACTCTTGTTTTCTGGCAGAGGTAATATTTGAA--A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 402 283 + 635616 I e eulMac1.LGHX01000499v1 355 283 + 631505 I e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210248 178 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e otoGar3.GL873534 11032489 0 + 30473821 C a score=138926.000000 s hg38.chrUn_KI270749v1 84153 23 + 158759 ATGTTCAAGATGTAGCTGGCATT s panTro5.chr3 201971790 23 - 202621043 ATGTTCAAGATGTAGCTGGCATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739800 23 - 205426864 ATGTTCAAGATGTAGCTGGCATT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556332 23 + 86207423 ATGTTCAAGATGAAGCTGGCATT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042943 23 + 204787373 GTGTTCAAGATGAAGCTGGTATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60974789 23 - 192460366 GTGTTCAAGATGAAGCTGGTATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11086746 23 - 17224310 GTGTTCAAGATGAAGCTGGTATT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17398978 23 - 41321030 GTGTTCAAGATGAAGCTGGTATT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64472634 23 - 101219884 GTGTTCAAGATGAATCTGGTATT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 854927 23 - 924385 GTGTTCAAGATGAAGCTGGTATT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6698370 23 - 10587913 GTGTTCAAGATGAAGCTGGTATT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018218 22 - 98464013 ATGTTCAAGATGAAGATTTTAG- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700734 22 + 27742158 ATGTTCAAGATGAATATTTTAG- i saiBol1.JH378125 C 0 C 0 s canFam3.chr20 16577378 23 + 58134056 ATGTTTAAGTTGAAGCGTGCTTT i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1759973 23 - 2187301 ATGTTTAAGACAAATATGTAATT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 402 283 + 635616 I e eulMac1.LGHX01000499v1 355 283 + 631505 I e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210248 178 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e otoGar3.GL873534 11032489 0 + 30473821 C e aotNan1.NW_018502033v1 3696894 21 + 4093027 I e cebCap1.NW_016107467v1 238052 21 - 4835464 I a score=127713.000000 s hg38.chrUn_KI270749v1 84176 15 + 158759 ATAAA-----ATTTTAGATG s panTro5.chr3 201971813 15 - 202621043 ATAAA-----ATTTTAGATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739823 15 - 205426864 ATAAA-----ATTTTAGATG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556355 15 + 86207423 ATAAA-----ATTTTAGATG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042966 15 + 204787373 ATAAA-----ATTTTAGACG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60974812 15 - 192460366 ATAAA-----ATTTTAGACG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11086769 15 - 17224310 ATAAA-----ATTTTAGACG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399001 15 - 41321030 ATAAA-----ATTTTAGACG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64472657 15 - 101219884 ATAAA-----GTTTTAGACG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 854950 15 - 924385 ATAAA-----ATTTTAGATG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6698393 15 - 10587913 ATAAA-----ATTTTAGACG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018240 15 - 98464013 ATTAA-----ATTTTAGATC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700756 15 + 27742158 ATTAA-----ATTTTAGATC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238073 15 - 4835464 ATTAA-----ATTTTAGATC i cebCap1.NW_016107467v1 I 21 C 0 s aotNan1.NW_018502033v1 3696915 15 + 4093027 ATTAA-----ATTTTAGATC i aotNan1.NW_018502033v1 I 21 C 0 s canFam3.chr20 16577401 20 + 58134056 GTAAAAGTTTATTTTAGGTA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1759996 20 - 2187301 GTAAATATTTATTTTAAATT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 402 283 + 635616 I e eulMac1.LGHX01000499v1 355 283 + 631505 I e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1591920 4156 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210248 178 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e otoGar3.GL873534 11032489 0 + 30473821 C a score=249725.000000 s hg38.chrUn_KI270749v1 84191 17 + 158759 ATTTTCTTCCATAAGCC s panTro5.chr3 201971828 17 - 202621043 ATTTTCTTTCATAAGCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739838 17 - 205426864 ATTTTCTTTCATAAGCC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556370 17 + 86207423 ATTTTCTTCCATAAGCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042981 17 + 204787373 ATTTTCTTCCATAATCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60974827 17 - 192460366 ATTTTCTTCCATAAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11086784 17 - 17224310 ATTTTCTTCCATAAGCC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399016 17 - 41321030 ATTTTCTTCCATAAGCC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64472672 17 - 101219884 ATTTTCTTTCATAAGCC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 854965 17 - 924385 ATTTTCTTCCATAAGCC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6698408 17 - 10587913 ATTTTGTTCCGTAAGCC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018255 17 - 98464013 ATTTTCTTCCGTAAGTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700771 17 + 27742158 ATTTTCTTCCGTAAGTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238088 17 - 4835464 ATTTTCTTCCATAAGTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3696930 17 + 4093027 ATTTTCTTCTGTAAGTC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596076 17 - 9149476 ATTTTCTTCCATAACCC i micMur3.chr32 I 4156 C 0 s eulMac1.LGHX01000499v1 638 17 + 631505 ATTTTCTTCCATAACCC i eulMac1.LGHX01000499v1 I 283 C 0 s eulFla1.LGHW01000501v1 685 17 + 635616 ATTTTCTTCCATAACCC i eulFla1.LGHW01000501v1 I 283 C 0 s otoGar3.GL873534 11032489 17 + 30473821 ATTTTCTTCCCTAAGCA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16577421 17 + 58134056 ACTGTTTTCCTTAATCC i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1760016 17 - 2187301 ACTGTCTTCTTTAGGCT i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210248 178 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=14972.000000 s hg38.chrUn_KI270749v1 84208 1 + 158759 A s panTro5.chr3 201971845 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739855 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556387 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042998 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60974844 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11086801 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399033 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64472689 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 854982 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6698425 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018272 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700788 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238105 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3696947 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596093 1 - 9149476 A i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 655 1 + 631505 A i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 702 1 + 635616 A i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11032506 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1760033 1 - 2187301 G i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210248 178 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e canFam3.chr20 16577438 1 + 58134056 I a score=551107.000000 s hg38.chrUn_KI270749v1 84209 35 + 158759 AAGGTAAATTAAGATTTCTTTCCTCTTCATAAAGG s panTro5.chr3 201971846 35 - 202621043 AAGGTAAATTAAGATTTCTTTCCTCTTCATAAAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739856 35 - 205426864 AAGGTAAATTAAGATTTCTTTCCTCTTCATAAAGG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556388 35 + 86207423 AAGGTAAATTAAGATTTCTTTCTTCTTCATAAAGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66042999 35 + 204787373 AAGGTAAATTAAAATTTCTTTCCTCTTCATAACGG i rheMac8.chr2 C 0 I 2 s macFas5.chr2 60974845 35 - 192460366 AAGGTAAATTAAAATTTCTTTCCTCTTCATAAAGG i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11086802 35 - 17224310 AAGGTAAATTAAAATTTCTTTCCTCTTCATAAAGG i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17399034 35 - 41321030 AAGGTAAATTAATATTTCTTTCCTCTTCATAAAGG i cerAty1.NW_012009469v1 C 0 I 2 s chlSab2.chr22 64472690 35 - 101219884 AAGGTAAATTAAGATTTCTTTCCTCTTCATAAAGG i chlSab2.chr22 C 0 I 2 s manLeu1.NW_012098965v1 854983 35 - 924385 AAGGTAAATTAATATTTCTTTCCTCTTCATAAAGG i manLeu1.NW_012098965v1 C 0 I 2 s colAng1.NW_012114711v1 6698426 35 - 10587913 AAGGTAAATTAAGATTTCTTTCCTCTTCATAAAGG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018273 35 - 98464013 AAGGGAAATCAAGATTTCTTTCCTCTTCATAAAGG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700789 35 + 27742158 AAGGGAAATCAAGATTTATTTTCTCTTTATAAAGG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238106 35 - 4835464 AAGGGACATCAAGATTTCTTTCCTCTTCATAAAGA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3696948 35 + 4093027 AAGGGAAATCAAGATTTCTTTCCTCTTCATAAAGG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596094 35 - 9149476 AAGGGATACCAAGATTTCTTTCCTTTTCATAAAGG i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 656 35 + 631505 AAGGGACATCAAGATTTCTTGCCTTTTCATAGAGG i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 703 35 + 635616 AAGGGACATCAAGATTTCTTGCCTTTTCATAGAGG i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11032507 35 + 30473821 AAGAGAAATCAAGATTTATTTCCTTTTCAAAAAGG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16577439 35 + 58134056 AAGGGAAATTAAGATTTCTTTCCTCTTCATAAAGG i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1760034 35 - 2187301 AAGAGAAATCAAGAATTCTTTCTGATTCATAAAGA i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210248 178 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=21021.000000 s hg38.chrUn_KI270749v1 84244 1 + 158759 A s panTro5.chr3 201971881 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739891 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556423 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043036 1 + 204787373 A i rheMac8.chr2 I 2 C 0 s macFas5.chr2 60974882 1 - 192460366 A i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11086839 1 - 17224310 A i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17399071 1 - 41321030 A i cerAty1.NW_012009469v1 I 2 C 0 s chlSab2.chr22 64472727 1 - 101219884 A i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 855020 1 - 924385 A i manLeu1.NW_012098965v1 I 2 C 0 s colAng1.NW_012114711v1 6698461 1 - 10587913 A i colAng1.NW_012114711v1 C 0 I 3 s rhiBie1.NW_016820128v1 1210426 1 - 2311269 A i rhiBie1.NW_016820128v1 I 178 I 225 s calJac3.chr15 46018308 1 - 98464013 A i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27700824 1 + 27742158 A i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 238141 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3696983 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 I 1 s micMur3.chr32 1596129 1 - 9149476 A i micMur3.chr32 C 0 I 1 s eulMac1.LGHX01000499v1 691 1 + 631505 A i eulMac1.LGHX01000499v1 C 0 I 1 s eulFla1.LGHW01000501v1 738 1 + 635616 A i eulFla1.LGHW01000501v1 C 0 I 1 s otoGar3.GL873534 11032542 1 + 30473821 A i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16577474 1 + 58134056 A i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1760069 1 - 2187301 A i dasNov3.JH563077 C 0 I 1 e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=54716.000000 s hg38.chrUn_KI270749v1 84245 5 + 158759 AAAAA s panTro5.chr3 201971882 5 - 202621043 AAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739892 5 - 205426864 AAAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556424 5 + 86207423 AAAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043037 5 + 204787373 AAAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60974883 5 - 192460366 AAAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11086840 5 - 17224310 AAAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399072 5 - 41321030 AAAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64472728 5 - 101219884 AAAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855021 5 - 924385 AAAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6698465 5 - 10587913 AAAAA i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46018310 4 - 98464013 -AAAA i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27700826 5 + 27742158 AAAAA i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 238143 5 - 4835464 AAAAA i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3696985 5 + 4093027 AAAAA i aotNan1.NW_018502033v1 I 1 C 0 s micMur3.chr32 1596131 4 - 9149476 AAAA- i micMur3.chr32 I 1 I 117 s eulMac1.LGHX01000499v1 693 4 + 631505 AAAA- i eulMac1.LGHX01000499v1 I 1 I 2692 s eulFla1.LGHW01000501v1 740 4 + 635616 AAAA- i eulFla1.LGHW01000501v1 I 1 I 2905 s otoGar3.GL873534 11032544 4 + 30473821 AAAA- i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16577476 5 + 58134056 AAGAA i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1760071 5 - 2187301 AAAAA i dasNov3.JH563077 I 1 C 0 e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210427 225 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=344155.000000 s hg38.chrUn_KI270749v1 84250 36 + 158759 CCTATTTTCAGAGTTAATAT-------GACAGTGGCTATGGCT------ s panTro5.chr3 201971887 36 - 202621043 CCTATTTTCAGAGTTAATAT-------GACAGTGGCTATGGCT------ i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739897 36 - 205426864 CCTATTTTCAGAGTTAATAT-------GACAGTGGCTATGGCT------ i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556429 36 + 86207423 CCTATTTTCAGAGTCAATAT-------GACAGTGGCTATGGCT------ i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043042 35 + 204787373 CCTGTTTTCAGAGTTAATAT-------GACAGTGG-TATGGTT------ i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60974888 35 - 192460366 CCTGTTTTCAGAGTTAATAT-------GACAGTGG-TATGGTT------ i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11086845 35 - 17224310 CCTGTTTTCAGAGTTAATAT-------GACAGTGG-TATGGTT------ i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399077 35 - 41321030 CCTGTTTTCAGAGTTAATAT-------GACAGTGG-TATGGTT------ i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64472733 35 - 101219884 CCTGTTTTCAGAGTTAATAT-------GACAGTGG-TATGGTT------ i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855026 35 - 924385 CCTGTTTTCAGAGTTAATAT-------GACAGTGG-TATGGTT------ i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6698470 35 - 10587913 CCTGTTTTCAGAGTTAATAT-------GACAGTGG-TATGGTT------ i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018314 36 - 98464013 CTTATTTTCAGAATTAATAT-------GACAGGGGCTATGGTT------ i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700831 36 + 27742158 CTTATTTTCAGAATTAATAT-------GACAGGGGCTATGGTT------ i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238148 36 - 4835464 CTTATTTTCAGAGTTAATAT-------GACAGGGGCTATGGTT------ i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3696990 36 + 4093027 CTTATTTTCAGAGTTAATAT-------GACAGGGGCTATGGTT------ i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11032548 35 + 30473821 -ACCTTTTAGGAGTTAGTAC-------AACAGTGGCTATAGTT------ i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16577481 36 + 58134056 CTTATTTTAGAAATTGATAT-------GAGTGTGGCTATGGCA------ i canFam3.chr20 C 0 I 293 s dasNov3.JH563077 1760076 49 - 2187301 TCTATTTTAGGAGTAGATATTAAAAGCAACTATGGCTATAGCTATGGCT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1596135 117 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210427 225 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=717446.000000 s hg38.chrUn_KI270749v1 84286 92 + 158759 ATAGCTTTCTTTTACTTCAAG------------------------AAAAAAAAGTAGAGAATGGTATGGTGTATTTGGTAT------AAATAAAGGAAACATGAGGATGAGA-C-AGAAAACAC s panTro5.chr3 201971923 89 - 202621043 ATAGCTTTCTTTTACTTC---------------------------AAAAAAAAGTAGAGAATGGTATGGTGTATTTGGTAT------AAATAAAGGAAACATGAGGATGAGA-C-AGAAAACAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204739933 89 - 205426864 ATAGCTTTCTTTTACTTC---------------------------AAAAAAAAGTAGAGAATGGTATGGTGTATTTGGTAT------AAATAAAGGAAACATGAGGATGAGA-C-AGAAAACAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556465 91 + 86207423 ATAGCTTTCTTTTACTTCAA-------------------------AAAAAAAAGTAGAGAATGGTATGGTGTATTTGGTGT------AAATAAAGGAAACATGAGGATGAGA-C-AGAAAACAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043077 84 + 204787373 ATAGCTTTCTTTTACTTC---------------------------AAAAAAAAGTAGAGAATGGTATGGTGTATTTAA---------GTAGAAAGGAAACATGAGGATGAGA-C-AGATTAC-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60974923 83 - 192460366 ATAGCTTTCTTTTACTTC----------------------------AAAAAAAGTAGAGAATGGTATGGTGTATTTAA---------GTAGAAAGGAAACATGAGGATGAGA-C-AGATTAC-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11086880 84 - 17224310 ATAGCTTTCTTTTACTTC---------------------------AAAAAAAAGTAGAGAATGGTATGGTGTATTTAA---------GTAGAAAGGAAACATGAGGATGAGA-C-AGATTAC-- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399112 85 - 41321030 ATAGCTTTCTTTTACTTCA--------------------------AAAAAAAAGTAGAGAATAGTATGGTGTATTTAA---------GTAGAAAGGAAACATGAGGATGAGA-C-AGATTAC-- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64472768 84 - 101219884 ATAGCTTTCTTTTACTTC---------------------------AAAAAAAAGTAGAGAAGGGTATGGTGTATTTAA---------GTAGAAAGGAAACATGAGGATGAGA-C-CGATTAC-- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855061 83 - 924385 ATAGCTTTCTTTTACTTC----------------------------AAAAAAAGTAGAGAATGGTATGGTGTATTTAA---------GTAGAAAGGAAACATGAGGATGAGA-C-AGATTAC-- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6698505 84 - 10587913 ATAGCTTTCTTTTACTTC---------------------------AAAAAAAAGTCAAGAATGGTATAATGTATTTAA---------GTAGAAAGGAAACATGAGGACGAGA-C-AGATTAC-- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018350 94 - 98464013 ATAGCTTTCTTTTACTTC----------------------------AAAAAAAGTAGAGAATGGTACTGCATATTTGGTATATTTAAGTAGCAAGGAAACATGAGGATGAGA-C-AGAAAACAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700867 94 + 27742158 ATAGCTTTCTTTTACTTC----------------------------AAAAAAGGTAGAGAATGGTACGGTATATTTGGTATATTTAAGTAGCAAGGAAACATGAGAATGAGA-C-AGAAAACAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238184 95 - 4835464 CTAGCTTTATTTTACTTC---------------------------AAAAAAAAGTAGAGAATGGTACAGTATATTTGGTATATTTAAGTAGCAAGGAAACATGAGAATGAGA-C-AGAAAACAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697026 92 + 4093027 ATAGCTTTCTTTTACTTC----------------------------AAAAAAAGTAGAGAATGGTATGGTATATTTGGTATATTTAAGTAGCAAGGAAACATGAGGATGAGA-C---AAAACAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11032583 83 + 30473821 ATGGCTTTCCTTTTTTTC----------------------------AAGAAAAGTAGAGACGGGTATGGTTATATTGA---------ATTAGAAGGGGACATGTGGATGAGA-C-CAGAAAC-- i otoGar3.GL873534 C 0 I 3 s canFam3.chr20 16577810 114 + 58134056 ataaatttctgttgtttataagccacccagcctatgattttttTTAAAGGAAGACAGAGAATGGTATGGGATATTTAT---------GTGGAAAAGGAACATGAGATTGAGA-CTAGAAAACAT i canFam3.chr20 I 293 I 1 s dasNov3.JH563077 1760125 85 - 2187301 ATGGCTTTCTAGTAATTG----------------------------AAGAAAATTAGAGAAGGCTATGGTAT-TTTAG---------ATGGATAGGAAACATGATGATATGATC-AGAAAATAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 567399 493 + 2414909 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1596135 117 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210427 225 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=-2125.000000 s hg38.chrUn_KI270749v1 84378 1 + 158759 -G s panTro5.chr3 201972012 1 - 202621043 -G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740022 1 - 205426864 -G i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556556 1 + 86207423 -G i nomLeu3.chr21 C 0 C 0 s calJac3.chr15 46018444 1 - 98464013 -G i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700961 1 + 27742158 -G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238279 1 - 4835464 -G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697118 1 + 4093027 -C i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 567892 1 + 2414909 -G i proCoq1.NW_012148064v1 I 493 C 0 s otoGar3.GL873534 11032669 1 + 30473821 -G i otoGar3.GL873534 I 3 C 0 s dasNov3.JH563077 1760210 1 - 2187301 C- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e mm10.chr6 45726464 1001 - 149736546 I e micMur3.chr32 1596135 117 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210427 225 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I e manLeu1.NW_012098965v1 855144 0 - 924385 C e macNem1.NW_012018021v1 11086964 0 - 17224310 C e rheMac8.chr2 66043161 0 + 204787373 C e canFam3.chr20 16577924 1 + 58134056 I e colAng1.NW_012114711v1 6698589 0 - 10587913 C e chlSab2.chr22 64472852 0 - 101219884 C e cerAty1.NW_012009469v1 17399197 0 - 41321030 C e macFas5.chr2 60975006 0 - 192460366 C a score=135189.000000 s hg38.chrUn_KI270749v1 84379 13 + 158759 TTCAAGAAGAAGT s panTro5.chr3 201972013 13 - 202621043 TTCAAGAAGAAGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740023 13 - 205426864 TTCAAGAAGAAGT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556557 13 + 86207423 TTCAAGAAGAAGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043161 13 + 204787373 TTCAAAAAGAAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975006 13 - 192460366 TTCAAAAAGAAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11086964 13 - 17224310 TTCAAAAAGAAGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399197 13 - 41321030 TTCAAAAAGAAGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64472852 13 - 101219884 TTCAAAAAGAAGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855144 13 - 924385 TTCAAAAAGAAGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6698589 13 - 10587913 TTCAAAAAGAAGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018445 13 - 98464013 TTGAAGGAGAAAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700962 13 + 27742158 TTGAAGGAGAAAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238280 13 - 4835464 TTGAAGGAGAAAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697119 13 + 4093027 TTGAAGGAGAAAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596252 13 - 9149476 TTCAAGAAGCAGC i micMur3.chr32 I 117 C 0 s proCoq1.NW_012148064v1 567893 13 + 2414909 TTTAAGAAGAGGG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11032670 13 + 30473821 TTCAAGAAGAAGC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16577925 12 + 58134056 -TTGAAGAGAAGT i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1760211 10 - 2187301 CTCAAGAAGT--- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e mm10.chr6 45726464 1001 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210427 225 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=1152941.000000 s hg38.chrUn_KI270749v1 84392 88 + 158759 AATCTTCTCCCCTTTGACAGCCAAAACACAGGTACATTTTTAGCCTCATTTGGTTTCTAAGACAGTTCTTTTTAAACGAAGAAAAAAA s panTro5.chr3 201972026 88 - 202621043 AATCTTCTCCCCTTTGACAGCCAAAACACAGGTACATTTTTAGCCTCATTTGGTTTCTAAGACAGTTCTTTTTAAACAAAGAAAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740036 88 - 205426864 AATCTTCTCCCCTTTGACAGCCAAAACACAGGTACATTTTTAGCCTCATTTGGTTTCTAAGACAGTTCTTTTTAAACAAAGAAAAAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556570 88 + 86207423 AATCTTCTCCCTTTTGACAGCCAAAACACAGGTATATTTTTAGCCTCATTTGGTTTCTAAGACAGTTCTTTTTAAACAAAGAAAAAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043174 84 + 204787373 AA---TCTCCCCATTGACAGTC-AAACACAGATAAATTTTTAGCCTCATTTGGTTTCTAAGACAGTTCTTTTTAAACAAAGAAAAAAA i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60975019 84 - 192460366 AA---TCTCCCCATTGACAGTC-AAACACAGATAAATTTTTAGCCTCATTTGGTTTCTAAGACAGTTCTTTTTAAACAAAGAAAAAAA i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11086977 84 - 17224310 AA---TCTCCCCATTGACAGTC-AAACACAGATAAATTTTTAGCCTCATTTGGTTTCTAAGACAGTTCTTTTTAAACAAAGAAAAAAA i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17399210 85 - 41321030 AA---TCTCCCCATTGACAGTCAAAACACAGATAAATTTTTAGCCTCATTTGGTTTCTAAGACAGTTCTTTTTAAACAAAGAAAAAAA i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64472865 85 - 101219884 AA---TCTCCCCATTGACAGTCAAAACACAGATAAATTTTTAGCCTCATTTGGTTTCTAAGACAGTTCTTTTTAAACAAAGAAAAAAA i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 855157 85 - 924385 AA---TCTCCCCATTGACAGTCAAAACACAGATAAATTTTTAGCCTCATTTGGTTTCTAAGACAGTTCTTTTTAAACAAAGAAAAAAA i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6698602 88 - 10587913 AATCTTCTCCCCATTGATAGCCAAAACACAGATAAATTTTTACCCTCATTTGGTTTCTAAGACAGTTCTTTTAAAACAAAGAAAAAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018458 87 - 98464013 AAACTTCTCCCCTTTGACAGCC-AAACACAGATAAATTTTTAGCCTCATTTGGTTTTGAGGACAATTCTTTTTAAACAAAGAAAAAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27700975 88 + 27742158 AAACTTTTCCCCTTTGACAGTCAAAACACAGATAAATTTTTAGCCTCATTTGGTTTTGAAGACAATTCTTTTTAAATAAAGAAAAAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238293 87 - 4835464 AAACTTCTCCCCTTTGACAGCCAAAACGCAGATAAATTTTTAGCCTCATTTGGTTTTGAAGACAATTCTTTGTAAACAAAG-AAAAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697132 88 + 4093027 AACCTTATCCCCTTTAACAGCCAAAACACAGATAAATTTTTAGCCTTATTTGGTTTTGAAGACAATTCTTTTTAAACAAAGAAAAAAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596265 88 - 9149476 AACCTCTTCCCCTTTGACAGACAAAACACAAATAAATTTTTAGCCCCATTTGGTTTCTAACACAGTTCTTTTGGAACAAACGGAAAAA i micMur3.chr32 C 0 I 1 s proCoq1.NW_012148064v1 567906 88 + 2414909 AACCTCCTCCCCTTTGACAGCCAAAACACAAATAAATTTTTAGCCCCATTTGGTTTCTAAGACAGTTCTTTTTGAACAAAGGGAAAAA i proCoq1.NW_012148064v1 C 0 I 1 s otoGar3.GL873534 11032683 88 + 30473821 AATCGCCTCCCCTTTCACAGCCAAAACCCAAACAGATTTTCAGGCCCTGTTGCTTCCTAAGACAGTTCTTTTTGAACGAACCAAAAAA i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45727465 87 - 149736546 AATCTCTTCCCTTTAAGCAACCATAACTTAAATA-ATTTTCAGCTCCATTTGGTTACCAAGAAAGTTAATTTTGAACAAATTAGGGAA i mm10.chr6 I 1001 I 2 s canFam3.chr20 16577937 87 + 58134056 ATTCTCCTCCCCTTTGACAGCCAAAATGCAAATAGATTTT-AGCCTGATCTGATTTCTAAGACAGTTCTTTTTGAATAAAGGGGGAAA i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1760221 66 - 2187301 ATTCTCCTCTCCATTGACAGCC----------------------CCATTTTGATTTCTAAGCCAGTTCTTTTTCAACCAAGGGGAAAA i dasNov3.JH563077 C 0 I 1 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69625268 3721 + 202140232 I e rhiBie1.NW_016820128v1 1210427 225 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=20339.000000 s hg38.chrUn_KI270749v1 84480 1 + 158759 A s panTro5.chr3 201972114 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740124 1 - 205426864 A i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69628989 1 + 202140232 A i ponAbe2.chr3 I 3721 I 556 s nomLeu3.chr21 67556658 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043259 1 + 204787373 A i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60975104 1 - 192460366 A i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11087062 1 - 17224310 A i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17399296 1 - 41321030 A i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64472951 1 - 101219884 A i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 855243 1 - 924385 A i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6698690 1 - 10587913 A i colAng1.NW_012114711v1 C 0 I 1 s rhiBie1.NW_016820128v1 1210652 1 - 2311269 A i rhiBie1.NW_016820128v1 I 225 I 2317 s calJac3.chr15 46018545 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701063 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238380 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697220 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596354 1 - 9149476 A i micMur3.chr32 I 1 I 1 s proCoq1.NW_012148064v1 567995 1 + 2414909 A i proCoq1.NW_012148064v1 I 1 C 0 s otoGar3.GL873534 11032772 1 + 30473821 G i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45727554 1 - 149736546 A i mm10.chr6 I 2 C 0 s canFam3.chr20 16578025 1 + 58134056 A i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1760288 1 - 2187301 A i dasNov3.JH563077 I 1 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=6480453.000000 s hg38.chrUn_KI270749v1 84481 432 + 158759 TCATGTTTTGCACCCTCAGTCTCTTCAATGCATGGTAAATCAGTAGCAAAGTAATGATGAATG-TGGAAATTAATCA-----AAAGCAAAACTATAGTTTTTA--C----ACGTTTCTTAGTGAATTAATGATTTCCCTTTATTACAGTAAATGTGTCAAGACCATAAAATGTGAACAAAAATTTAAAGTGTAAGATTAAATGCTGTTGAAACTTCGCCTGACCCTTATTAATGCAACACTGTGCTTAAGCAGAAACCTGGAA--TAGAAATAGAAATTATAAGAAAGTGTTACAGCCAGAAATTTTCCAGTAAAAGCCT---AA--AAAAAATGAAGTAAGTGACAATAGCTTT-AAAAGATAAGTCAGGGGAAGAGCCATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATGGTACCTATAAAGAATCAAAT----GTAACTGAGAAA s panTro5.chr3 201972115 434 - 202621043 TCATGTTTTGCACCCTCAGTCTCTTCAATGCATGGTAAATTAGTAGCAAAGTAATGGTGAATG-CGGAAATTAATCA-----AAAGCAAAACTATAGTTTTTA--C----ACGTTTCTTAGTGAATTAATGATTTCCCTTTATTACAGTAAATGTGTCAAGACCATAAAATGTGAACAAAAATTTAAAGTGTAAGATTAAATGCTGTTGAAACTTTGCCTGACCCTTATTAATGCAACACTGTGCTTAAGCAGAAACCTGGAA--TAGAAATAGAAATTATAAGAAAGTGTTACAGCCAGAAATTTTCCAGTAAAGGCCTAA-AA--AAAAAATGAAGTAAATGATAATAGCTTT-AAAAGATAAGTCAGGGGAAGAGCCATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATGGTACCTATAAAGAATCAAAT----GTAACTGAGAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740125 434 - 205426864 TCATGTTTTGCACCCTCAGTCTCTTCAATGCATGGTAAATTAGTAGCAAAGTAATGGTGAATG-CGGAAATTAATCA-----AAAGCAAAACTATAGTTTTTA--C----ACGTTTCTTAGTGAATTAATGATTTCCCTTTATTACAGTAAATGTGTCAAGACCATAAAATGTGAACAAAAATTTAAAGTGTAAGATTAAATGCTGTTGAAACTTTGCCTGACCCTTATTAATGCAACACTGTGCTTAAGCAGAAATCTGGAA--TAGAAATAGAAATTATAAGAAAGTGTTACAGCCAGAAATTTTCCAGTAAAGGCCTAA-AA--AAAAAATGAAGTAAATGATAATAGCTTT-AAAAGATAAGTCAGGGGAAGAGCCATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATGGTACCTATAAAGAATCAAAT----GTAACTGAGAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67556659 439 + 86207423 TCATGTTTTGCACCCTCACTCTCTTCAATGCTTAGTAAATTAGTAGCAAAGTAATGATGAATG-TGGAAATTAATCA-----AAAGCAAGACTATAGTTATTA--CATATATGTTTCTTAGTGAATTAATGATTTCCCTTTTTTACAGTAAATGTATCAACACCATAAAACGTGAACAAAAATTTAAAGTGTAAGATTAAATGCTGTTGAAACTTTGCCTGACCCTTATTAATGCAACACTGTGCTTAAGCAGAAACCTGGAA--CAGAAATAGAAATTATAAGAAAGTGTTACAGCCAGAAATTTTCCAGTAAAGGCCTAAGAA--AAAAAATGAAGTAAATGATAATAGCTTT-AAAAGATAAGTCAGGGGAAGAGACATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATGGTACCTATAAAGAATCAAAT----GTAACTGAGAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043260 436 + 204787373 TCATGTTTTGCACCCTCATTCTCTTGAACACATGGTAAATTAGTAGCAAAGTAATGATGAATG-TGGAAGTTAATCA-----AAAGCAAAACTATAGTTTCCA--CACATATGTTTCTTAGGGAATTAATGATTTCCCTTTATTACAGTAAATGTGTCAAGACCATAAAATGTGAACAAAAATTTAAAGTGTAAGATTAAATGCTGTTGAAACTTTGCCTGACCCTTATTAATGCAACACTGTGTTTAAGCAGAAACCTGGGA--TAGAAATAGAAATTGTAAGAAAGTGCTACAGCCAGAAATTTTCCAGTAAAGGCCTA--AG--GAAAAATGAAGTAAATGATAATAGCCTT-AAAAGAGAAGTCAGGGGAAGAGACATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATAGTA-CTATAAAGAATCAAAT----GTAACTGAGAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975105 436 - 192460366 TCATGTTTTGCACCCTCATTCTCTTGAACACATGGTAAATTAGTAGCAAAGTAATGATGAATG-TGGAAGTTAATCA-----AAAGCAAAACTATAGTTTCCA--CACATATGTTTCTTAGGGAATTAATGATTTCCCTTTATTACAGTAAATGTGTCAAGACCATAAAATGTGAACAAAAATTTAAAGTGTAAGATTAAATGCTGTTGAAACTTTGCCTGACCCTTATTAATGCAACACTGTGTTTAAGCAGAAACCTGGGA--TAGAAATAGAAATTGTAAGAAAGTGCTACAGCCAGAAATTTTCCAGTAAAGGCCTA--AG--AAAAAATGAAGTAAATGATAATAGCCTT-AAAAGAGAAGTCAGGGGAAGAGACATCA-CAACTCAATTTTAAACAAGGCCAGGGGCAGAAAATAGTA-CTATAAAGAATCAAAT----GTAACTGAGAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087063 436 - 17224310 TCATGTTTTGCACCCTCATTCTCTTGAACACATGGTAAATTAGTAGCAAAGTAATGATGAATG-TGGAAGTTAATCA-----AAAGCAAAACTATAGTTTCCA--CACATATGTTTCTTAGGGAATTAATGATTTCCCTTTATTACAGTAAATGTGTCAAGACCATAAAATGTGAACAAAAATTTAAAGTGTAAGATTAAATGCTGTTGAAACTTTGCCTGACCCTTATTAATGCAACACTGTGTTTAAGCAGAAACCTGGGA--TAGAAATAGAAATTATAAGAAAGTGCTACAGCCAGAAATTTTCCAGTAAAGGCCTA--AG--AAAAAATGAAGTAAATGATAATAGCCTT-AAAAGAGAAGTCAGGGGAAGAGACATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATAGTA-CTATAAAGAATCAAAT----GTAACTGAGAGA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399297 436 - 41321030 TCATGTTTTGCACCCTCATTCTCTTGAACACATGGTAAATTAGTAGCAAAGTAATGATGAATG-TGGAAGTTAATCA-----AAAGCAAAACTATAGTTTCCA--CACATATGTTTCTTAGGGAATTAATGATTTCCCTTTATTACAGTAAATGTGTCAAGACCATAAAATGTGAACAAAAATTTAAAGTGTAAGATTAAATGCTGTTGAAACTTTGCCTGACCCTTATTAATGCAACACTGTGTTTAAGCAGAAACCTGGGA--TGGAAATAGAAATTATAAGAAAGTGCTACAGCCAGAAATTTTCCAGTAAAGGCCTA--AG--AAAAAATGAAGTAAATGATAATAGCCTT-AAAAGAGAAGTCAGGGGAAGAGACATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATAGTA-CTATAAAGAATCAAAT----GTAACTGAGAGA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64472952 436 - 101219884 TCATGTTTTGCACCCTCCTTCTCTTGAACACATGGTAAATTAGTAGCAAAGTAATGATGAATG-TAGAAGTTAATCA-----AAAGCAAAACTATAGTTTCCA--CACATATGTTTCTTAGGGAATTAATGATTTCCCTTTATTACAGTAAATGTGTCAAGACCATAAAATGTGAACAAAAATTTAAAGTGTAAGATTAAATGCTGTTGAAACTTTGCCTGACCCTTATTAATGCAACACTGTGTTTAAGCAGAAACCTGGGA--TAGAAATAGAAATTATAAGAAAGTGCTATAGCCAGAAATTTTCCGGTAAAGGCCTA--AG--AAAAAATGAAGTAAATGATAATAGCCTT-AAAAGAGAAGTCAGGGGAAGAGACATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATAGTA-CTATAAAGAATCAAAT----GTAACTGAGAGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855244 436 - 924385 TCATGTTTTGCACCCTCATTCTCTTGAACACATGGTAAATTAGTAGCAAAGTAATGATGAATG-TGGAAGTTAATCA-----AAAGCAAAACTATAGTTTCCA--CACATATGTTTCTTAGGGAATTAATGATTTCCCTTTATTACAGTAAATGTGTCAAGACCATAAAATGTGAACAAAAATTTAAAGTGTAAGATTAAATGCTGTTGAAACTTTGCCTGACCCTTATTAATGCAACACTGTGTTTAAGCAGAAACCTGGGA--TAGAAATAGAAATTATAAGAAAGTGCTACAGCCAGAAATTTTCCAGTAAAGGCCTA--AG--AAAAAATGAAGTAAATGATAATAGCCTT-AAAAGAGAAGTCAGGGGAAGAGACATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATAGTA-CTATAAAGAATCAAAT----GTAACTGAGAGA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6698692 441 - 10587913 TCATGTTTTGCACCCTCATTCTCTTGAATGCATGGTAAATTAGTAGCAAAGTAATGACGAATG-TGGAAATTAATCAAAAGCAAAGCAAAACTGTAGTTTCCA--CACATATGTTTCTTAGAGAATTAATGATTTCCCTTTATTACAGTAAATGTGTCAAGACCATAAAATGTGAACAAAAATTTAAAGTGTAAGATTAAATGCTGTTGAAACTTTGCCTGACCCTTATTAATGCAACACTGTGTTTAAGCAGAAACCTGGGA--TAGAAATAGAAATTATAAGAAAGTGCTACAGCCAGAAATTTTCCCGTAAAGGCCTA--AG--AAAAAATGAAGTAAATGATAATAGCTTT-AAAAGAGAAGTCAAGGGAAGAGACATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATGGCA-CTATAAAGAATCAAAT----GTAACTGAGAGA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46018546 429 - 98464013 TAACGTTTTGCATCCTCATTCTCTTGAATGCATAGTAAATTAGCAGCAAAGTAATAATGAATG-TGGATATTTATCA-----AAAGCAAAAC--TAGTTTCCA--CAC----GTTTCTTAGTGAATTAATGATTTCCCTTTATTACAGTAAGTATGTCAAGACCATAAAATGTGAAGAATAATTTAAAGTATAAGATTAAATGTCATTGAAACTTTGCCCGACCCTTATTAATGCAGCACTGTGCTTAAGCAAAAACCTGAGA--TAGAAGTAGAAATTATAAGAAAGTGTTACAGCCAGAAATTTTCCAGGAAAGGCCAA--AGA-AAAAAATGAAGTAAATGATAATAGCTTT-AAAAGAGAAGTCAGGGGAAGAGA---CA-CAGTTCAATTTTAAACAAGGCCAGGGGCAGAAAATGGTACCTATGAAGAATCAAAT----GTAACTGAGAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701064 426 + 27742158 TAATGTTTTGCATCCTCATTCTCTTGAATGCTTAGTAAATTAGCAGCAAAGTAATGATGAATG-TGGATATTTATCA-----AAAGCAAAACTATAGTTTTCATGCAT----GTTTCTTTATGAATTAATGGTTTCACTTTATTAC----AGTGTGTCAAGACCATAAAATGTGAAGAATAATTTAAAG----AGATTAAATACTGTTGAAACTTTGCCCGACCCTTATTAATGCAACACTGTGCTTAAGCAGAAACCTGAGA--TAGAAATAGAAATTATAAGAAAGTGTTACAGCCAGAAATTTTTCATG-AAGACCAA--AG--AAAAAATGAAGTAAATGACAATAGCTTT-AAAAGAGAAGTCAGGGGAAGAGACATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATGGTACCTATGAAGAATCAAAT----GTAACTGAGAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238381 432 - 4835464 TAATGTTTTGCATCCTCATTCTCTTGAATGCATAGTAAATTAGCAGCAAAGTAATGATGAATG-TGGATATTTATCA-----AAAGGAAAACTATGGTTTTCA--CAC----GTTTCTTAGTGAATTAATGATTTCACTTTATTACAGTAAGTGTGTCAAGACCGTAAAATGTGAAGAATGA-ATAAAGTATAAGATTAAATGCTGTTGAAACTTTGCCCGACCCTTATTAATGCAACACTGTGCTTAAGCAGAAACCTGAGA--TAGAAATAGAAATTATAAGAAAGGGTTACAGCCAGAAATTTTCCAGGAAAGGCCAA--AG--AAAAAATGAAGTAAATGACAATAGCTTT-AAAAGAGAAGTCAGGGGAAGAGACATCA-CAATTCAATTTTAAACAAGGCCAGGGACAGAAAATGGTACCTATGAAGAATCAAAT----GTAACTGAGAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697221 437 + 4093027 TAATGTTTTGCATCCTCATTCTCTTGAATGCATAGTAAATTAGCAGCAAAGTAATGATGAATG-TGTATATTTATCA-----AAAGCAAAACTATAGTTTTCA--CACATATGTTTCTTAGTGAATTAATGATTTCCCTTTATTACAGTAAGTGTGTGAAGGCCATAAAATATGAAGAATAATTTAAAGTATAAGATTAAATGCTGTTGAAACTTTGCCTGACCCTTATTAATGCAACACTGTGCTTAAGCAGAAACCTGAGA--TAGAAATAGAAATTATAAGAAAGTGTTACAGCCAGAAATTTTCCAGGAAAGGCCAA--AG--AAGAAATGAAGTAAATGATAATAGCTTT-AAAAGAGAAGTCAGGGGAAGAGGCATCA-CAATTCAATTTTAAACAAGGCCAGGGGCAGAAAATGGTACCTATGAAGAATCAAAT----GTAACTGAGAAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596356 439 - 9149476 TTATGCTTTGCACCTTCATTCTCTTGAATGCATAGTAAATCAATAGCAAAGCAGTGATGAATA-TGGAAATTAATCA-----AAAA-GAAACTATAGTTTTCA--CACATATATTTCTAAGTGAATTAATGATTTCCCTCTATTACAGTAAATGTGTCAAGACCGTAAAAAGTGAGGAATAATTAAAACTGTAAGATTAAATGCTGTTGAAACTTTGCCCAGCCCTTATTAATGCAACACTGTGCTAAAGCAGAAATCTAGGA--TAGAAATAGAAATTATAAGAAAGTGTTACAGCCAGAAATTTTCAAATAAAGGCCTATGAA--AAAAAATGAACTAAATGATAAGAGCTTA-AAAAGAGAAGTCAGAGGAAGAGACATAGGCAATTCAATTTTAAACATGGCCAGGGGCCGGAAATGGTACACATAAAAAATCAAAT----GTAACTGAGAAA i micMur3.chr32 I 1 C 0 s proCoq1.NW_012148064v1 567996 439 + 2414909 TCATGTTTTGCACCCTCATTCTCTTGAATGCATAGTAAATCAACAGCAAAGCAGTGATGAATA-TGGAAATTAATCA-----AAAA-GAAAGTATGGTTTTCA--CACATGTATTTCTAAGTGAATTAATGATTTCCCTCTATTACGGTAAATGTGTCAAAACCATAAAAAGCGAGGAATAATTAAAACTGTAAGATTAAATGCTGTTGAAACTTTGCCCAGCCCTTATTAATGCAACACTGTGCTCAAGCTGAAACCTAGGA--TAGAAATAGAAATTACAAGAAAGTGTTACAGCCAGAAATTTTCAAATAAAGGTCTAAGAA--AAAAAATGAACTAAATGATAAGAGCTTA-AAAAGAGAAGTCAGAGGAAGAGACATAAGCAATTCAATTTTAAACATGGCCAGGGGCAGGAAATGGTACACACAAAGAATCAAAT----GTAACTGAGAAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11032773 438 + 30473821 TTATATTTTGCACCTTTATGCTTTTGAATGCATAGTAAATTAACAGCAAAGCAATGATGAATA-TGGAAATTAATCA-----AAAG-AAAACTATAGTTTTCA--CACATATATTTCTAAGTGAATTAATGATTTTCCCCTATTACCGTAAATGTATCAAGACCATAAAATGTGAGGAATAATTAAAACTGGAAGATTAAATGTTGCTGAAACTTTGCCCAGCCCTTATTAATGCAACACTGTGCTTAAGCAGAAGCCTGGAA--TAGAAATAGGAATTACCAGAAAGTGTTATAACCAGAAATTTTAAAATAAAGTTCTAAGAA--AAAAAATGAACCAAATGATAAGAGCTTA-AAAAGAGACGTCAGGGGAAGAGACACAAGCAAGGCAATTTTAAACATGGCCAGGAGCGAGAAATGATACACAC-AAGAGTCAAAC----GTAACTTAGAAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45727555 426 - 149736546 TCACATTCTGAACTCTTATTCTCTTGAATGCATAGTAAATTAATACAGCAATAAAGATGAATA-TGGAAATTAATCA-----AACA-AAAACTGTAGTTTTCA--CACACATATTTCTATGTGAATTAATGATTTCCCTTTATTATAGTAAATGTGTCACGACTGTAAAGTGTGAGGAATAATTAAAAATGTAAGCTTAAAAGC--TTGAAACTTTGCCCAGCCCATATTAATGAAGCGCTGTGCTGAAGCAGAAACC-AGGA--TACAAATA-AAATGATGAGGAAGTGTCATCAGCAGAAATTTTCAAAACAAGTCTAA--Ga--aaaaaaaaatatatat-ataataGCTTT-AAAAGAGAAGTCATGGAAGAGGCCCGAG-GCATTCAATTTTAAACACAGCCCATGGCAGAA-----TACACATGGAGAATCCAGT----GTAGATATGAAA i mm10.chr6 C 0 I 277 s canFam3.chr20 16578026 439 + 58134056 TCTTGTTCTTTATCCTCATTTTCTTGAATGCATAGTAAATTAAGAGCAAAGTA---ATGAATA-TGGAAATTAATCA-----AATGCAAAACTATAGTTTTCA--CACACATATTTCTAAGTGAATTAATGATATCCCTTTATTACAGTAAATGTGTCAAGACAGTAAAATGTGAAGAATAATTAAAAATGTAAGATTAAATGCTGTTGAAACTTTGCCCAG-CCTTATTAATGCAATGCTAAGCTTGAGCAAAAACCTGGGA--TAGAAATAGAAATTATAAGAAAGTGTTACAGCCAGAAATTTTCAAATAAGTGTCTA--AG--GAAAAATGAACCAAATGATAATAACTTTAAAAAGAGAAGTCAAGGGAAGATACACAAGCAATTCAATTTCAAACATGGCCAAGGGCAGAGGATGTACAATATAAAGAATTGAGTGTAGGTAACTAAGAAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1760289 438 - 2187301 TCATGTTCTGCATCCTCATTCTCTTGAATGCACAGCAAATTAACAGCAAAGTAATGATGAATATTTGAAACTAATCA-----AAAGGAAAGCTACAGTTTTCA--CAC--ATATTTCTAGATGAATTAATGATTTCCCTTTATTATAGTAAATCTGTCAAGACAGTAAAATGTTAGGAATAATTAAAAATGTAAGATTAAATACTGTTGAAACTTTGCCCAGCCCTTGTTAATGCAACACTGTGCTTAAGCAGAAACGTGAAGCCTAGAAATAGATATTTTAAGAAAGTGT--CAGCCAGATG-TTTCAAATAAAATACTA--AGGCAAATAAATAAACAAAAGATAATAGCTTT-AAAACAGAAGTCAAGGGAAAGGACATGAGCAATTAAATTTTAAACATGGCCAGCAGCAGAAACTGGTATACACAAAGAATCAAAT----GCAACCAAGAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69628990 556 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=225593.000000 s hg38.chrUn_KI270749v1 84913 17 + 158759 AACAATCTTG-TAATAAG s panTro5.chr3 201972549 17 - 202621043 AATAATCTTG-TAATAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740559 17 - 205426864 AATAATCTTG-TAATAAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557098 17 + 86207423 AATAATCTTG-TAATAAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043696 17 + 204787373 AATAATCTTG-TAATAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975541 17 - 192460366 AATAATCTTG-TAATAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087499 17 - 17224310 AATAATCTTG-TAATAAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399733 17 - 41321030 AATAATCTTG-TAATAAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473388 17 - 101219884 AATAATCTTG-TAATAAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855680 17 - 924385 AATAATCTTG-TAATAAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699133 17 - 10587913 AATAATCTTG-TAATAAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018975 17 - 98464013 AATAATCTTG-TAGTTAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701490 17 + 27742158 AATAATCTTG-TAGTTAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238813 17 - 4835464 AATAATCTTG-TAGTTAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697658 17 + 4093027 AATAGTCTTG-TAGTTAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596795 18 - 9149476 AATAATCTTGATAATAAG i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 568435 18 + 2414909 AATAATCTTGGTAATAAG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033211 18 + 30473821 AATAATCTTGGTAATAAG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16578465 18 + 58134056 AATAATCTTGGTAATAAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1760727 18 - 2187301 AACCATCTTGGTTGTAAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e mm10.chr6 45727981 277 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69628990 556 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 122144 10219 + 958716 I a score=265411.000000 s hg38.chrUn_KI270749v1 84930 16 + 158759 TCAAAGAGTGGTTTTG s panTro5.chr3 201972566 16 - 202621043 TCAAAGAGTGGTTTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740576 16 - 205426864 TCAAAGAGTGGTTTTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557115 16 + 86207423 TCAAAGAGTGGTTTTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043713 16 + 204787373 TCAAAGAGTGGTTTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975558 16 - 192460366 TCAAAGAGTGGTTTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087516 16 - 17224310 TCAAAGAGTGGTTTTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399750 16 - 41321030 TCAAAGAGTGGTTTTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473405 16 - 101219884 TCAAAGAGTGGTTTTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855697 16 - 924385 TCAAAGAGTGGTTTTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699150 16 - 10587913 TCAAAGAGTGGTTTTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46018992 16 - 98464013 TCAAAGGCTGGTTTTG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701507 16 + 27742158 TCAAAGACTGGTTTTG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238830 16 - 4835464 TCAAAGTCTGGTTTTG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697675 16 + 4093027 TCAAAGGCTGGTTTTG i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 132363 16 + 958716 TCAAAGGGTGGTTTTG i tarSyr2.KE939134v1 I 10219 I 913 s micMur3.chr32 1596813 16 - 9149476 TCAAAGGGTGGTTTTG i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 568453 16 + 2414909 TCAAAGGGTGGTTTTA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033229 16 + 30473821 TCAAAAGGTGATTTCG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16578483 16 + 58134056 TCAAAGAATGGCTTTG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1760745 16 - 2187301 TCACAGGGTGATTTTG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e mm10.chr6 45727981 277 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69628990 556 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I a score=353913.000000 s hg38.chrUn_KI270749v1 84946 23 + 158759 AAGGAGAAGATTCAATAATCCAG s panTro5.chr3 201972582 23 - 202621043 AAGGAGAAGATTCAATAATCCAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740592 23 - 205426864 AAGGAGAAGATTCAATAATCCAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557131 23 + 86207423 AAGGAGAAGATTCAATAATCCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043729 23 + 204787373 AAGGAGAAGATTCAATAATCCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975574 23 - 192460366 AAGGAGAAGATTCAATAATCCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087532 23 - 17224310 AAGGAGAAGATTCAATAATCCAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399766 23 - 41321030 AAGGAGAAGATTCAATAATCCAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473421 23 - 101219884 AAGGAGAAGATTCAATAATCCAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855713 23 - 924385 AAGGAGAAGATTCAATAATCCAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699166 23 - 10587913 AAGGAGAAGATTCAATAATCCAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019008 23 - 98464013 AAGGAGAAGATTCAATAATCCAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701523 23 + 27742158 AAGGAGAAGATTCAATAATCCAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238846 23 - 4835464 AAGGAGAAGATTCAATAATCCAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697691 23 + 4093027 AAGGAGAAGATTCAATAATCCAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596829 23 - 9149476 AAGGAGAGGATTCAATAATCTAG i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 568469 23 + 2414909 AAGCAGAGGATTCAATAATCTAG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033245 23 + 30473821 AAGGAGACAATTCAATAATCTAG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16578499 23 + 58134056 AAAGAGAAGATTCAATAGTCTAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1760761 23 - 2187301 AAGGAGTGGAGTCCATAGTCCAG i dasNov3.JH563077 C 0 I 2886 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e mm10.chr6 45727981 277 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69628990 556 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=827973.000000 s hg38.chrUn_KI270749v1 84969 64 + 158759 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAA------CGCTCTGCTTGAGCAAAAG s panTro5.chr3 201972605 63 - 202621043 TTGTTAGCTCTCAGCAGGAATCCATTAAA---GGAGACATGCACTAAA------CGCTCTGCTTGAGC-AAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740615 63 - 205426864 TTGTTAGCTCTCAGCAGGAATCCATTAAA---GGAGACATGCACTAAA------CGCTCTGCTTGAGC-AAAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557154 64 + 86207423 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAA------CTCTCTGCTTGAGCAGAAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043752 64 + 204787373 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAA------CTTTCTGCTTGAGCAAAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975597 64 - 192460366 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAA------CTTTCTGCTTGAGCAAAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087555 64 - 17224310 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAA------CTTTCTGCTTGAGCAAAAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399789 64 - 41321030 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAA------CTTTTTGCTTGAGCAAAAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473444 64 - 101219884 TTGTTAGCTCTTAGCAGGTATCCATTAAA---GGAGACATGTACTAAA------CTTTCTGCTTGAGCAAAAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855736 64 - 924385 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAA------CTTTCTGCTTGAGCAAAAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699189 64 - 10587913 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAA------CTTTCTGCTTGAGCAAAAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019031 64 - 98464013 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAG------CTTTCTGCTTGAGCAAAAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701546 64 + 27742158 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAG------CTTTCTGCTTGAGCAATAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238869 63 - 4835464 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAG------CTTTCTGCTTGAGCAA-AG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697714 64 + 4093027 TTGTTAGCTCTTAGCAGGAATCCATTAAA---GGAGACATGCACTAAA------CTTTCTGCTTAAGCAAGAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596852 57 - 9149476 TTGTTAGCTCTCAGCACAGATCCATTAAG---GAAGACGTGCACTAAG-------------CTTGGGGAAACG i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 568492 64 + 2414909 TTGTTAGCTCTCAGCACAGATCCATTAAG---GAAGACGTGCACTAAG------CTTTCTACTTGTGCAAAAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033268 73 + 30473821 TTGTTAGCTCTCAGCCCAGATCCATTAAGGAAGAAGATGTGCTCTAAACTTAAGCTTTCTGCCTCGGCAGAAG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16578522 64 + 58134056 TAGCTAGCTTTTGGCATTGTTCCGTAGAG---GAAGACATGCACTAAG------TTTTCTGCATGGGCAAAAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763670 64 - 2187301 TGGTTAATTCTTGATGCAAATCCATACAG---GGACAGATAGGCTTAG------CTTTCTACATCGGCAAAAA i dasNov3.JH563077 I 2886 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e mm10.chr6 45727981 277 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69628990 556 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=19110.000000 s hg38.chrUn_KI270749v1 85033 1 + 158759 T s panTro5.chr3 201972668 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740678 1 - 205426864 T i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69629546 1 + 202140232 T i ponAbe2.chr3 I 556 I 5297 s nomLeu3.chr21 67557218 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043816 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975661 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087619 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399853 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473508 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855800 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699253 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019095 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701610 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238932 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697778 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596909 1 - 9149476 T i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 568556 1 + 2414909 T i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033341 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16578586 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763734 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e mm10.chr6 45727981 277 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=290955.000000 s hg38.chrUn_KI270749v1 85034 20 + 158759 ATGTTTCTTAAGGTAGAAAA s panTro5.chr3 201972669 20 - 202621043 ATGCTTCTTAAGGTAGAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740679 20 - 205426864 ATGCTTCTTAAGGTAGAAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557219 20 + 86207423 ATGTTTCTTAAGGCAGAAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043817 20 + 204787373 ATGTTTCTTAAGGTAGAAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975662 20 - 192460366 ATGTTTCTTAAGGTAGAAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087620 20 - 17224310 ATGTTTCTTAAGGTAGAAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399854 20 - 41321030 ATGTTTCTTAAGGTAGAAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473509 20 - 101219884 ATGTTTCTTAAGGTAGAAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855801 20 - 924385 ATGTTTCTTAAGGTAGAAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699254 20 - 10587913 ATGTTTCTTAAGGTAGAAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019096 20 - 98464013 ATGTTTCTTAAGGTAGAAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701611 20 + 27742158 ATGTTTCTTAAGGTAGAAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238933 20 - 4835464 ACATTTCTTAAGGTAGAAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697779 20 + 4093027 ATGTTTCTTAAGGTAGAAAC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1596910 20 - 9149476 GTGTTTCTTAAGGTAGAAAA i micMur3.chr32 C 0 I 128 s proCoq1.NW_012148064v1 568557 20 + 2414909 ATGTTTCTTAAGGTAGAAAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033342 15 + 30473821 ATG-----CAAGGTAGAAAA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16578587 19 + 58134056 ATGTTTC-TAAGGAAGAGAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763735 20 - 2187301 ATACTTCTTAAGGTGAAAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e mm10.chr6 45727981 277 - 149736546 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=242471.000000 s hg38.chrUn_KI270749v1 85054 24 + 158759 GTTAGAAACAGTGCAAATGCTTTG s panTro5.chr3 201972689 24 - 202621043 GTTAGAAACAGCGCAAATGCTTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740699 24 - 205426864 GTTAGAAACAGTGCAAATGCTTTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557239 24 + 86207423 GTTAGAAACAGTGCAAATGCTTTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043837 24 + 204787373 GTTAGAAACAGTGCAAATGCTTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975682 24 - 192460366 GTTAGAAACAGTGCAAATGCTTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087640 24 - 17224310 GTTAGAAACAGTGCAAATGCTTTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399874 24 - 41321030 GTTAGAAACAGTGCAAATGCTTTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473529 24 - 101219884 GTTAGAAACAGTGCAAATGCTTTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855821 24 - 924385 GTTAGAAACAGTGCAAATGCTTTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699274 24 - 10587913 GTTAGAAACAGTGCAAATGCTTTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019116 24 - 98464013 GTTAGAAACAGTGCAAATGCTTTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701631 24 + 27742158 GTTAGAAACAGTCCAAATGCTTTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238953 24 - 4835464 GTTAGAAACAGTGCAAATGCTTTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697799 24 + 4093027 GTTAGAAACAGTGCAAATGCTTTC i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 568577 18 + 2414909 ------GCCAGTCCACATGCTTTG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033357 5 + 30473821 ------GACAG------------- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16578606 18 + 58134056 ------GGCAGTCCAAATGTTTTG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763755 18 - 2187301 ------GCCAGTCGAAATGTGTTC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e mm10.chr6 45727981 277 - 149736546 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=768250.000000 s hg38.chrUn_KI270749v1 85078 74 + 158759 ACTAAATGAACTGATCGCATTGGTCAAACA----AGAACGTTTTGGAAAACTA---TACATACTT------CTTCAAAATAGAAAAG s panTro5.chr3 201972713 74 - 202621043 ACTAAATGAACTGATCGCAATGGTCAAACA----AGAACGTTTTGGAAAACTA---TACATACTT------TTTCAAAATGGAAAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740723 74 - 205426864 ACTAAATGAACTGATCGCATTGGTCAAACA----AGAACGTTTTGGAAAACTA---TACATACTT------CTTCAAAATGGAAAAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557263 74 + 86207423 ACTAAATGAACTGACCGCATTGGTCAAACA----AGAACGTTTTGGAAAACTA---TACTTACTT------CTTCAAAATGGAAAAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043861 70 + 204787373 ACTAAATGAACTGATTGGATTGGTCAAGCA----AGAACATTTTGGAAAACTA-------TACTT------CTTCAAAATGGAAAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975706 70 - 192460366 ACTAAATGAACTGATTGGATTGGTCAAGCA----AGAACATTTTGGAAAACTA-------TACTT------CTTCAAAATGGAAAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087664 70 - 17224310 ACTAAATGAACTGATTGGATTGGTCAAGCA----AGAACATTTTGGAAAACTA-------TACTT------CTTCAAAATGGAAAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399898 70 - 41321030 ACTAAATGAACTGATTGGATTGGTGAAGCA----AGAACATTTTGGAAAACTA-------TACTT------CTTCAAAATGGAAAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473553 70 - 101219884 ACTAAATGAACTGATTGGATTGGTCAAGCA----AGAACATTTTGGAAAACTA-------TACTT------CTTCAAAATGGAAAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855845 70 - 924385 ACTAAATGAACTGATTGGATTGGTCAAGCA----AGAACATTTTGGAAAACTA-------TACTT------CTTCAAAATGGAAAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699298 70 - 10587913 ACTAAATGAACTGATTGGATTGGTCAAGCA----AGAACATTTTGGAAAACTA-------TACTT------CTTCAAAATGGAAAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019140 70 - 98464013 ACTAAATGAACTGACTGCATTGGTCAAACA----AGAACATTTTGGAAAACTA-------TACTT------CTTCAAAATGGTAAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701655 70 + 27742158 ACTAAATGAACTGACTGCATTGGTCAAACA----AGAACATTTTGGAAAAGTA-------TACTT------CTTTAAAGTGGTAAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 238977 70 - 4835464 ACCGAGTGAACTGACTACATTGGTCAAACA----AGAACATTTTGGAAAAGTA-------TGCTT------CTTCAAAATGGTAAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697823 70 + 4093027 ACTAAATCAACTGACTGCATTGGTCAAACA----AGAACATTTTGGAAAACTA-------TACGT------CTTCAAAATGGCAAAA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 568595 74 + 2414909 ACTAAATGTACTGGTTGCATCGGGCCAAGC----ATATCATTTTGGAAAACTG---TATCCACTT------CTCCAAAATGGAAAAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033362 68 + 30473821 -------GAACTGATGGCATTGGCCAAACC----AGATCGTTTTGGAAACGTG--TTACTTATTT------CTCCAAAATGGAAAAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45728258 77 - 149736546 acagaataagggagTTACATTGGTCAAAGA----AGATCATAGTGGGAAAAAAATCTGTCTACTC------TTCTAGAACAAGAAAC i mm10.chr6 I 277 C 0 s canFam3.chr20 16578624 73 + 58134056 AATGAATGAATTGCTTATCGTGGTCAAATC----GAATCATTCTGGAAAACTG---TACCAACCC------CTCCAAAAATGGAAA- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763773 80 - 2187301 ACTAAAATCACTGGTTATTTCAGTGAAAGAGGATGGATCATTTTAGAAAATTG-------TACTTTACCACTACCAAATTGGGAAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59533533 2660 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=182053.000000 s hg38.chrUn_KI270749v1 85152 14 + 158759 GGGAGTAGGGCTAT s panTro5.chr3 201972787 14 - 202621043 GGGAGTAGGGCTAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740797 14 - 205426864 GGGAGTAGGGCTAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557337 14 + 86207423 GGGAGTAGGACTAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043931 14 + 204787373 GGGAGTAGGGCTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975776 14 - 192460366 GGGAGTAGGGCTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087734 14 - 17224310 GGGAGTAGGGCTAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399968 14 - 41321030 GGGAGTAGGGCTAT i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59536193 14 + 187378091 GAGGGTACGAGTGT i papAnu3.chr2 I 2660 I 903 s chlSab2.chr22 64473623 14 - 101219884 GGGAGTAGGGCTAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855915 14 - 924385 GGGAGTAGGGCTAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699368 14 - 10587913 GGGAGTAGGGCTAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019210 14 - 98464013 GCGAGTAGGGCTAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701725 14 + 27742158 ACGAGTAGGGCTAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239047 14 - 4835464 GCGAGTAGGGCTAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697893 14 + 4093027 GCGAGTAGAGCTAT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 568669 14 + 2414909 GCAAGTAAAGTTAT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033430 14 + 30473821 GCAAATAGGGTTAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45728335 14 - 149736546 GTGAATAGGGCTAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16578697 14 + 58134056 CAGATTAGGGCTAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763853 14 - 2187301 GAGAGAGTGATCAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=214091.000000 s hg38.chrUn_KI270749v1 85166 16 + 158759 TCAGGGAACCAATGAC s panTro5.chr3 201972801 16 - 202621043 TCAGGGAACCAATGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740811 16 - 205426864 TCAGGGAACCAATGAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557351 16 + 86207423 TCAGGGAACCAATGAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043945 16 + 204787373 TCAGGGAGCCAATGAC i rheMac8.chr2 C 0 I 5 s macFas5.chr2 60975790 16 - 192460366 TCAGGGAGCCAATGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087748 16 - 17224310 TCAGGGAGCCAATGAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399982 16 - 41321030 TCAGGGAGCCAATGAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473637 16 - 101219884 TCAGGGGGCCAATGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855929 16 - 924385 TCAGGGAGCCAATGAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699382 16 - 10587913 TCAGGGAGCCAATGAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019224 16 - 98464013 TGAGGGAACCAATGAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701739 16 + 27742158 TGAGGGAACCAATGTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239061 16 - 4835464 TGAGGGAACCAATGAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697907 16 + 4093027 TGAGGGAACCAATGAC i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 568683 16 + 2414909 TCAGGGAACCAATGAC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033444 16 + 30473821 TCAGGCAACAAATGAC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45728349 15 - 149736546 -AAAGGGATCAATAAC i mm10.chr6 C 0 C 0 s canFam3.chr20 16578711 16 + 58134056 TCAGAGAACCAATGAC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763867 16 - 2187301 TGGGAGAAAAAATGAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=15793.000000 s hg38.chrUn_KI270749v1 85182 2 + 158759 TC s panTro5.chr3 201972817 2 - 202621043 TC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740827 2 - 205426864 TC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557367 2 + 86207423 TC i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60975806 2 - 192460366 CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087764 2 - 17224310 CC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17399998 2 - 41321030 CC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473653 2 - 101219884 GC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855945 2 - 924385 CC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699398 2 - 10587913 CC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019240 2 - 98464013 TC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701755 2 + 27742158 TC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239077 2 - 4835464 TC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697923 2 + 4093027 TC i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 568699 2 + 2414909 TC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033460 2 + 30473821 TC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45728364 2 - 149736546 TT i mm10.chr6 C 0 C 0 s canFam3.chr20 16578727 2 + 58134056 TT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763883 2 - 2187301 CC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e rheMac8.chr2 66043961 5 + 204787373 I a score=1277.000000 s hg38.chrUn_KI270749v1 85184 3 + 158759 AAA s macNem1.NW_012018021v1 11087766 3 - 17224310 AAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400000 3 - 41321030 AAG i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 855947 3 - 924385 AAG i manLeu1.NW_012098965v1 C 0 C 0 s cebCap1.NW_016107467v1 239079 3 - 4835464 AAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697925 3 + 4093027 AAA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 568701 2 + 2414909 -AA i proCoq1.NW_012148064v1 C 0 I 1 s otoGar3.GL873534 11033462 2 + 30473821 -AT i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45728366 2 - 149736546 AA- i mm10.chr6 C 0 C 0 s canFam3.chr20 16578729 3 + 58134056 GAC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763885 3 - 2187301 AAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e rheMac8.chr2 66043961 5 + 204787373 I e saiBol1.JH378125 27701757 0 + 27742158 C e calJac3.chr15 46019242 0 - 98464013 C e colAng1.NW_012114711v1 6699400 0 - 10587913 C e chlSab2.chr22 64473655 0 - 101219884 C e macFas5.chr2 60975808 0 - 192460366 C e nomLeu3.chr21 67557369 0 + 86207423 C e panPan2.chr3 204740829 0 - 205426864 C e panTro5.chr3 201972819 0 - 202621043 C a score=2548.000000 s hg38.chrUn_KI270749v1 85187 1 + 158759 A s cebCap1.NW_016107467v1 239082 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 I 7 s aotNan1.NW_018502033v1 3697928 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 I 7 s proCoq1.NW_012148064v1 568704 1 + 2414909 A i proCoq1.NW_012148064v1 I 1 C 0 s otoGar3.GL873534 11033465 1 + 30473821 A i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45728368 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16578732 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763888 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e manLeu1.NW_012098965v1 855950 0 - 924385 C e macNem1.NW_012018021v1 11087769 0 - 17224310 C e rheMac8.chr2 66043961 5 + 204787373 I e saiBol1.JH378125 27701757 0 + 27742158 C e calJac3.chr15 46019242 0 - 98464013 C e colAng1.NW_012114711v1 6699400 0 - 10587913 C e chlSab2.chr22 64473655 0 - 101219884 C e cerAty1.NW_012009469v1 17400003 0 - 41321030 C e macFas5.chr2 60975808 0 - 192460366 C e nomLeu3.chr21 67557369 0 + 86207423 C e panPan2.chr3 204740829 0 - 205426864 C e panTro5.chr3 201972819 0 - 202621043 C a score=7725.000000 s hg38.chrUn_KI270749v1 85188 10 + 158759 ATTCCTATGG s proCoq1.NW_012148064v1 568705 10 + 2414909 ATTTCTATGG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11033466 10 + 30473821 ATTTGTATGG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45728369 10 - 149736546 ATTCCCATAG i mm10.chr6 C 0 C 0 s canFam3.chr20 16578733 10 + 58134056 TTTCCTGTGG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763889 10 - 2187301 CTCCCTATGG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e manLeu1.NW_012098965v1 855950 0 - 924385 C e macNem1.NW_012018021v1 11087769 0 - 17224310 C e rheMac8.chr2 66043961 5 + 204787373 I e aotNan1.NW_018502033v1 3697929 7 + 4093027 I e cebCap1.NW_016107467v1 239083 7 - 4835464 I e saiBol1.JH378125 27701757 0 + 27742158 C e calJac3.chr15 46019242 0 - 98464013 C e colAng1.NW_012114711v1 6699400 0 - 10587913 C e chlSab2.chr22 64473655 0 - 101219884 C e cerAty1.NW_012009469v1 17400003 0 - 41321030 C e macFas5.chr2 60975808 0 - 192460366 C e nomLeu3.chr21 67557369 0 + 86207423 C e panPan2.chr3 204740829 0 - 205426864 C e panTro5.chr3 201972819 0 - 202621043 C a score=910.000000 s hg38.chrUn_KI270749v1 85198 1 + 158759 a s proCoq1.NW_012148064v1 568715 1 + 2414909 A i proCoq1.NW_012148064v1 C 0 I 187 s otoGar3.GL873534 11033476 1 + 30473821 A i otoGar3.GL873534 C 0 I 30 s mm10.chr6 45728379 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16578743 1 + 58134056 A i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e manLeu1.NW_012098965v1 855950 0 - 924385 C e macNem1.NW_012018021v1 11087769 0 - 17224310 C e rheMac8.chr2 66043961 5 + 204787373 I e aotNan1.NW_018502033v1 3697929 7 + 4093027 I e cebCap1.NW_016107467v1 239083 7 - 4835464 I e dasNov3.JH563077 1763899 0 - 2187301 C e saiBol1.JH378125 27701757 0 + 27742158 C e calJac3.chr15 46019242 0 - 98464013 C e colAng1.NW_012114711v1 6699400 0 - 10587913 C e chlSab2.chr22 64473655 0 - 101219884 C e cerAty1.NW_012009469v1 17400003 0 - 41321030 C e macFas5.chr2 60975808 0 - 192460366 C e nomLeu3.chr21 67557369 0 + 86207423 C e panPan2.chr3 204740829 0 - 205426864 C e panTro5.chr3 201972819 0 - 202621043 C a score=372.000000 s hg38.chrUn_KI270749v1 85199 3 + 158759 cat s mm10.chr6 45728380 2 - 149736546 -AT i mm10.chr6 C 0 C 0 s canFam3.chr20 16578744 3 + 58134056 AAT i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e otoGar3.GL873534 11033477 30 + 30473821 I e manLeu1.NW_012098965v1 855950 0 - 924385 C e macNem1.NW_012018021v1 11087769 0 - 17224310 C e rheMac8.chr2 66043961 5 + 204787373 I e aotNan1.NW_018502033v1 3697929 7 + 4093027 I e cebCap1.NW_016107467v1 239083 7 - 4835464 I e dasNov3.JH563077 1763899 0 - 2187301 C e saiBol1.JH378125 27701757 0 + 27742158 C e calJac3.chr15 46019242 0 - 98464013 C e colAng1.NW_012114711v1 6699400 0 - 10587913 C e chlSab2.chr22 64473655 0 - 101219884 C e cerAty1.NW_012009469v1 17400003 0 - 41321030 C e macFas5.chr2 60975808 0 - 192460366 C e nomLeu3.chr21 67557369 0 + 86207423 C e panPan2.chr3 204740829 0 - 205426864 C e panTro5.chr3 201972819 0 - 202621043 C a score=273.000000 s hg38.chrUn_KI270749v1 85202 3 + 158759 ata s mm10.chr6 45728382 3 - 149736546 ATa i mm10.chr6 C 0 I 1119 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e otoGar3.GL873534 11033477 30 + 30473821 I e manLeu1.NW_012098965v1 855950 0 - 924385 C e macNem1.NW_012018021v1 11087769 0 - 17224310 C e rheMac8.chr2 66043961 5 + 204787373 I e aotNan1.NW_018502033v1 3697929 7 + 4093027 I e cebCap1.NW_016107467v1 239083 7 - 4835464 I e canFam3.chr20 16578747 0 + 58134056 C e dasNov3.JH563077 1763899 0 - 2187301 C e saiBol1.JH378125 27701757 0 + 27742158 C e calJac3.chr15 46019242 0 - 98464013 C e colAng1.NW_012114711v1 6699400 0 - 10587913 C e chlSab2.chr22 64473655 0 - 101219884 C e cerAty1.NW_012009469v1 17400003 0 - 41321030 C e macFas5.chr2 60975808 0 - 192460366 C e nomLeu3.chr21 67557369 0 + 86207423 C e panPan2.chr3 204740829 0 - 205426864 C e panTro5.chr3 201972819 0 - 202621043 C a score=0.000000 s hg38.chrUn_KI270749v1 85205 342 + 158759 caccatggaatactatgcagccataaaaaatgatgagttcatatcctttgtagggacatggatgaaattggaaaacatcattctcagtaaactatcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaattgaacaatgagatcacatggacacaggaaggggaatatcacactctggggactgtggtggggtcgggggaggggggagggatagcattgggagatatacctaatgctagatgacacattagtgggtgcagcgcaccagcatggcacatgtatacatatgtaactaacctgcacaatgtgcacatgtaccctaaaact e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e mm10.chr6 45728385 1119 - 149736546 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e otoGar3.GL873534 11033477 30 + 30473821 I e manLeu1.NW_012098965v1 855950 0 - 924385 C e macNem1.NW_012018021v1 11087769 0 - 17224310 C e rheMac8.chr2 66043961 5 + 204787373 I e aotNan1.NW_018502033v1 3697929 7 + 4093027 I e cebCap1.NW_016107467v1 239083 7 - 4835464 I e canFam3.chr20 16578747 0 + 58134056 C e dasNov3.JH563077 1763899 0 - 2187301 C e saiBol1.JH378125 27701757 0 + 27742158 C e calJac3.chr15 46019242 0 - 98464013 C e colAng1.NW_012114711v1 6699400 0 - 10587913 C e chlSab2.chr22 64473655 0 - 101219884 C e cerAty1.NW_012009469v1 17400003 0 - 41321030 C e macFas5.chr2 60975808 0 - 192460366 C e nomLeu3.chr21 67557369 0 + 86207423 C e panPan2.chr3 204740829 0 - 205426864 C e panTro5.chr3 201972819 0 - 202621043 C a score=1061.000000 s hg38.chrUn_KI270749v1 85547 37 + 158759 tagagtat--aataaaaaaaaaaaaaGAATAAAAAAAAA s mm10.chr6 45729504 39 - 149736546 taggatatggagtataaaaaataaattaattaaaaatta i mm10.chr6 I 1119 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e otoGar3.GL873534 11033477 30 + 30473821 I e manLeu1.NW_012098965v1 855950 0 - 924385 C e macNem1.NW_012018021v1 11087769 0 - 17224310 C e rheMac8.chr2 66043961 5 + 204787373 I e aotNan1.NW_018502033v1 3697929 7 + 4093027 I e cebCap1.NW_016107467v1 239083 7 - 4835464 I e canFam3.chr20 16578747 0 + 58134056 C e dasNov3.JH563077 1763899 0 - 2187301 C e saiBol1.JH378125 27701757 0 + 27742158 C e calJac3.chr15 46019242 0 - 98464013 C e colAng1.NW_012114711v1 6699400 0 - 10587913 C e chlSab2.chr22 64473655 0 - 101219884 C e cerAty1.NW_012009469v1 17400003 0 - 41321030 C e macFas5.chr2 60975808 0 - 192460366 C e nomLeu3.chr21 67557369 0 + 86207423 C e panPan2.chr3 204740829 0 - 205426864 C e panTro5.chr3 201972819 0 - 202621043 C a score=6228.000000 s hg38.chrUn_KI270749v1 85584 3 + 158759 AAA- s panTro5.chr3 201972819 3 - 202621043 AAA- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740829 3 - 205426864 AAA- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557369 3 + 86207423 AAA- i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60975808 3 - 192460366 AAG- i macFas5.chr2 C 0 C 0 s chlSab2.chr22 64473655 3 - 101219884 AAA- i chlSab2.chr22 C 0 C 0 s colAng1.NW_012114711v1 6699400 3 - 10587913 AAA- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019242 3 - 98464013 AAA- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701757 3 + 27742158 AAA- i saiBol1.JH378125 C 0 C 0 s mm10.chr6 45729543 3 - 149736546 -aat i mm10.chr6 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e micMur3.chr32 1596930 128 - 9149476 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e otoGar3.GL873534 11033477 30 + 30473821 I e manLeu1.NW_012098965v1 855950 0 - 924385 C e macNem1.NW_012018021v1 11087769 0 - 17224310 C e rheMac8.chr2 66043961 5 + 204787373 I e aotNan1.NW_018502033v1 3697929 7 + 4093027 I e cebCap1.NW_016107467v1 239083 7 - 4835464 I e canFam3.chr20 16578747 0 + 58134056 C e dasNov3.JH563077 1763899 0 - 2187301 C e cerAty1.NW_012009469v1 17400003 0 - 41321030 C a score=47536.000000 s hg38.chrUn_KI270749v1 85587 8 + 158759 AATTCCTA s panTro5.chr3 201972822 8 - 202621043 AATTCCTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740832 8 - 205426864 AATTCCTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557372 8 + 86207423 AATTCCTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043966 8 + 204787373 AATTTCTG i rheMac8.chr2 I 5 C 0 s macFas5.chr2 60975811 8 - 192460366 AATTTCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087769 8 - 17224310 AATTTCTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400003 8 - 41321030 AATTCCTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473658 8 - 101219884 AATTCCTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855950 8 - 924385 AATTCCTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699403 8 - 10587913 AATTCCTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019245 8 - 98464013 ACTTCCTG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701760 8 + 27742158 ACTTTCTG i saiBol1.JH378125 C 0 C 0 s micMur3.chr32 1597058 8 - 9149476 AATTTCTA i micMur3.chr32 I 128 C 0 s mm10.chr6 45729546 3 - 149736546 aat----- i mm10.chr6 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e otoGar3.GL873534 11033477 30 + 30473821 I e aotNan1.NW_018502033v1 3697929 7 + 4093027 I e cebCap1.NW_016107467v1 239083 7 - 4835464 I e canFam3.chr20 16578747 0 + 58134056 C e dasNov3.JH563077 1763899 0 - 2187301 C a score=34920.000000 s hg38.chrUn_KI270749v1 85595 3 + 158759 TGG s panTro5.chr3 201972830 3 - 202621043 TGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740840 3 - 205426864 TGG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557380 3 + 86207423 TGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043974 3 + 204787373 TGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975819 3 - 192460366 TGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087777 3 - 17224310 TGG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400011 3 - 41321030 TGG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473666 3 - 101219884 TGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855958 3 - 924385 TGG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699411 3 - 10587913 TGG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019253 3 - 98464013 TGG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701768 3 + 27742158 TGG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239090 3 - 4835464 TGG i cebCap1.NW_016107467v1 I 7 C 0 s aotNan1.NW_018502033v1 3697936 3 + 4093027 TGG i aotNan1.NW_018502033v1 I 7 C 0 s micMur3.chr32 1597066 3 - 9149476 TGG i micMur3.chr32 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e mm10.chr6 45729549 0 - 149736546 C e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e otoGar3.GL873534 11033477 30 + 30473821 I e canFam3.chr20 16578747 0 + 58134056 C e dasNov3.JH563077 1763899 0 - 2187301 C a score=63427.000000 s hg38.chrUn_KI270749v1 85598 5 + 158759 AAAAT s panTro5.chr3 201972833 5 - 202621043 AAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740843 5 - 205426864 AAAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557383 5 + 86207423 AAAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043977 5 + 204787373 AAAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975822 5 - 192460366 AAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087780 5 - 17224310 AAAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400014 5 - 41321030 AAAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473669 5 - 101219884 AAAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855961 5 - 924385 AAAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699414 5 - 10587913 AAAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019256 5 - 98464013 AAAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701771 5 + 27742158 AAAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239093 5 - 4835464 AAAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697939 5 + 4093027 AAAAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1597069 5 - 9149476 AAAAT i micMur3.chr32 C 0 C 0 s mm10.chr6 45729549 3 - 149736546 --aat i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1763899 5 - 2187301 AAAAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e otoGar3.GL873534 11033477 30 + 30473821 I e canFam3.chr20 16578747 0 + 58134056 C a score=241551.000000 s hg38.chrUn_KI270749v1 85603 23 + 158759 AAGTGTGCTTAATTTTA-TTTTTT s panTro5.chr3 201972838 23 - 202621043 AAGTGTGCTTAATTTTA-TTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740848 23 - 205426864 AAGTGTGCTTAATTTTA-TTTTTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557388 24 + 86207423 AAGTGTGCTTAATTTTATTTTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66043982 23 + 204787373 AAGTGTGCTTAATTTTA-TTTTTT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60975827 23 - 192460366 AAGTGTGCTTAATTTTA-TTTTTT i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11087785 23 - 17224310 AAGTGTGCTTAATTTTA-TTATTT i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17400019 23 - 41321030 AAGTGTGCTTAATTTTA-TTTTTT i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64473674 23 - 101219884 AAGTGTGCTTAATTTTA-TTTTTT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 855966 23 - 924385 AAGTGTGCTTAATTTTA-TTATTT i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6699419 23 - 10587913 AAGTGTGCTTAATTTTA-TTTTTT i colAng1.NW_012114711v1 C 0 I 2 s calJac3.chr15 46019261 23 - 98464013 AAGTGTGCttaatttta-tttttt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701776 23 + 27742158 AAGTGTGCttaatttta-tttttt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239098 23 - 4835464 AAGTGTGCTTAATTTTA-TTTTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697944 23 + 4093027 AAGTGTGCTTAATTTTA-TTTTTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1597074 23 - 9149476 AAGTGTGCTTAAGTTCA-CTTtta i micMur3.chr32 C 0 C 0 s mm10.chr6 45729552 2 - 149736546 aa---------------------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16578747 23 + 58134056 AGGTGTGCCTACATCCA-TTTTTG i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1763904 23 - 2187301 AACTATGCTTAAATGAA-TTTTTG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e rhiRox1.KN296641v1 1354169 2724 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e otoGar3.GL873534 11033477 30 + 30473821 I a score=17290.000000 s hg38.chrUn_KI270749v1 85626 1 + 158759 A s panTro5.chr3 201972861 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740871 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557412 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044006 1 + 204787373 A i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60975851 1 - 192460366 A i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11087809 1 - 17224310 A i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17400043 1 - 41321030 A i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64473698 1 - 101219884 A i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 855990 1 - 924385 A i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6699444 1 - 10587913 A i colAng1.NW_012114711v1 I 2 C 0 s rhiRox1.KN296641v1 1356893 1 - 1467263 A i rhiRox1.KN296641v1 I 2724 I 1574 s calJac3.chr15 46019284 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701799 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239121 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697967 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1597097 1 - 9149476 a i micMur3.chr32 C 0 C 0 s mm10.chr6 45729554 1 - 149736546 a i mm10.chr6 C 0 C 0 s canFam3.chr20 16578772 1 + 58134056 A i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1763927 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e otoGar3.GL873534 11033477 30 + 30473821 I a score=15561.000000 s hg38.chrUn_KI270749v1 85627 1 + 158759 A s panTro5.chr3 201972862 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740872 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557413 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044007 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975852 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087810 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400044 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473699 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855991 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699445 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019285 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701800 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239122 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697968 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1597098 1 - 9149476 a i micMur3.chr32 C 0 I 2 s mm10.chr6 45729555 1 - 149736546 a i mm10.chr6 C 0 C 0 s canFam3.chr20 16578773 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763928 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e otoGar3.GL873534 11033477 30 + 30473821 I a score=1424479.000000 s hg38.chrUn_KI270749v1 85628 127 + 158759 --ATGTATTTTTAGTCCCA---GTATGAGCAAGGCTCTACAATAGATTCTGCAGAATAAAAAAGTA--------GAA--AACA-----AGTGGGCCCTCTTGTTGAAGAGTTCATTGCCTAGTACAAGGTG-TGAAGATGCCTGGAAG s panTro5.chr3 201972863 127 - 202621043 --AGGTATTTTTAGTccca---gtatgagcaaggctctacaatagattctggagaataaaaaagta--------gaa--aaca-----agtgggccctcttgttgaagagttcattgcctagtACAAGGTG-TGAAGATGCCTGGAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204740873 127 - 205426864 --AGGTATTTTTAGTccca---gtatgagcaaggctctacaatagattctggagaataaaaaagta--------gaa--aaca-----agtgggccctcttgttgaagagttcattgcctagtACAAGGTG-TGAAGATGCCTGGAAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557414 127 + 86207423 --ATGTATTTTTAGTCCCA---GTATGAGCAAGGCTCTACAACAGATTCTGCAGAATATAAAAGTA--------GAA--AACA-----AGCGGGCCCTCCTGTCGAAGAGTTCGTTGCCTAGTACAAGGTG-TGAAGATGCCTGGAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044008 127 + 204787373 --TTGTATTTTTAGTCCCA---GTATGAGCAAGACTCTACAATAGATTCTGGAGAATATCAAAGTG--------GAA--AACA-----AGTGGGCCCTCCTGTTGAAGAGTTCATTGCCTAGTACAAGGTG-TGAAGATGCCTGGAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975853 127 - 192460366 --TTGTATTTTTAGTCCCA---GTATGAGCAAGACTCTACAATAGATTCTGGAGAATATCAAAGTG--------GAA--AACA-----AGTGGGCCCTCCTGTTGAAGAGTTCATTGCCTAGTACAAGGTG-TGAAGATGCCTGGAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087811 127 - 17224310 --TTGTATTTTTAGTCCCA---GTATGAGCAAGACTCTACAATAGATTCTGGAGAATATCAAAGTG--------GAA--AACA-----AGTGGGCCCTCCTGTTGAAGAGTTCATTGCCTAGTACAAGGTG-TGAAGATGCCTGGAAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400045 127 - 41321030 --ATGTATTTTTAGTCCCA---GTATGAGCAAACCTCTACAATAGATTCTGGAGAATATCAAAGTG--------GAA--AACA-----AGTGGGCCCTCCTGTTGAAGAGTTCATTGCCTAGTACAAGGTG-TGAAGATGCCTGGAAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473700 127 - 101219884 --ATGTATTTTTAGTCCCA---GTATGAGCAAACCTCTACAATAGATTCTGGAGAATATCAAAGTG--------GAA--AACA-----AGTGGGCTCTTCTGTTGAAGAGTTCATTGCCTAGAACAAGGTG-TGAAGATGCCTGGAAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 855992 127 - 924385 --ATGTATTTTTAGTCCCA---GTATGAGCAAACCTCTACAATAGATTCTGGAGAATATCAAAGTG--------GAA--AACA-----AGTGGGCCCTCCTGTTGAAGAGTTCATTGCCTGGTACAAGGTG-TGAAGATGCCTGGAAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699446 127 - 10587913 --ATGTATTTTTAGTCCCA---GTATGAGCAAGCCTCTACAATAGATTCTGTAGAATATCAAAGTG--------GAA--AACA-----AGTGGGCCCTCCTGTTGAAGAGTTCATTGCCTAGTACAAGGTG-TGAAGATGCCTGGAAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019286 127 - 98464013 --atgtatttttaGTCCCA---ATATGAGCAAGGATGCACAATAGATTCTGCAAAATGTAAAAGTA--------AAA--AACA-----AGTGGGCTGTCCTGTTGAAGAATTCATTGCCTAGTACAAGGTG-TGAAGATGCCTGGAAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701801 127 + 27742158 --atgtatttttaGTCCCA---ATATGAGCAAGGCTGTACAATAGATTCTGCAAAATGTAAAAGTA--------AAA--AACA-----AGTGGGCCCTCTTGCTGAAGAATTCATTGCCTAGTACAAGGTG-TGAAGATGCCAAGAAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239123 127 - 4835464 --ATGTATTTTTAGTCCCA---ATATGAGCAAGGCTGTACAATAGATTCTGCAAAATGTAAAAGTA--------AAA--AACA-----AGTGGGCCCTCCTGTTGAAGAATTCATTGCCTAGTACAAGGTG-TGAAGATGCCTGGAAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3697969 127 + 4093027 --ATGTATTTTTAGTCCCA---ATATGAGCAAGGCTGTACAATAGATTCTGCAAAATGTAAAAGTA--------AAA--AACA-----AGTGGGCCCTCCTGTTGAAGAATTCATTGCCTAGTACAAGGTG-TGAAGATGCCTGAAAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1597101 127 - 9149476 --atgtatttttagtccca---ggatgagcaaggcactacagtagatcctgcagaatataaagata--------gaa--aaca-----tgtgggccctccagttgaggagttcatagcttagtACAAGGTG-TTAAGGGGCACAGAGA i micMur3.chr32 I 2 C 0 s otoGar3.GL873534 11033507 126 + 30473821 --ATGTACTTTTAGCCCCA---GCTCGAGCAAGGCAC------AGATCCTGTAGAATATACAAATAGAAATGTGGAA--AACA-----TGT-GGTCCTCCAGTTCAGAAGCTCACAGCTCAGGACAAG--G-ATGAGGTGCCCCAAGA i otoGar3.GL873534 I 30 C 0 s mm10.chr6 45729556 121 - 149736546 --atattttttCAGGCCTA---TTGTGAACAAAAGCAGATGATAGATCTCACAGA-------------------CAA--AATACTTGCTGTAAGCTCTCCCAACCAGAAATACACGGGAGAGTATAAACTG-TGAGAAGGCACAGAAC i mm10.chr6 C 0 C 0 s canFam3.chr20 16578774 126 + 58134056 --ATATATGTTTAATCCCACTTGCATGGGGA--TTTATATGCTAGATTCTAGAGAGTATAAACAT---------TAA--AACA-----CAGAGGCTCTTTCCTTGAGGACTTCACTGCCTAGTAC-Aggtg-taaaggagcacagaga i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1763929 127 - 2187301 AAATTTATGTTTCATTCCA---GTACAAGCAAGAC-ATAGACTAGAGGCTGGAGAATATAAAATTA--------GAAGGGAAA-----ATTAGGTCCTTTCCTTGAAGAGTTCACAGCTGAGGACAAGTTGCTGAAGGAGCACA---- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 568716 187 + 2414909 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=1743131.000000 s hg38.chrUn_KI270749v1 85755 139 + 158759 AGGGAGGAACCAGCTCTACCTAGAAGTTAGAAAACTTTTCCTAGCTAAGGGTGTGAGATAAGAAGACAAGTTTTAAGTAGAAGGGTTTCCAGGCTGAGAGTCTAACATAGGC-AAGACATGGAGTCATGTTCTAGGCAGG-------- s panTro5.chr3 201972990 139 - 202621043 AGGGAGGAACCAGCTCTACCTAGAAGTTAGAAAACTTTTCCTAGCTAAGGGTGTGAGATAAGAAGACAAGTTTTAAGTAGAAGGGTTTCCAGGCTGAGAGTCTAACATAGGC-AAGACATGGAGTCATGTTCTAGGCAGG-------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204741000 139 - 205426864 AGGGAGGAACCAGCTCTACCTAGAAGTTAGAAAACTTTTCCTAGCTAAGGGTGTGAGATAAGAAGACAAGTTTTAAGTAGAAGGGTTTCCAGGCTGAGAGTCTAACAGAGGC-AAGACATGGAGTCATGTTCTAGGCAGG-------- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557541 139 + 86207423 AGGGAGGAACCAGCTCTACCTAGAAGTTAGACAACTTTTCCTAGCTAAGGGTGTGGGATAAGAAGACAAGTTTTAAGCAGAAGGGTTTCCAGGCTGAGATTCTAACACAGGC-AAGACACGGAGTCATGTTCTAGGCAGG-------- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044135 139 + 204787373 AGAGAGGAACCAGTTCTACCTAGAGGTAAGAAAACTTTTCATAGCTAAGGGTGTGGGATAAGAAGACAAGTTTTACGTAGAAGGTTTTCCAGCCTGAGAGTCGAACTTAGGC-AAGACACGGAGTCATGTTCTAGGCAGG-------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60975980 139 - 192460366 AGAGAGGAACCAGTTCTACCTAGAGGTAAGAAAACTTTTCATAGCTAAGGGTGTGGGATAAGAAGACAAGTTTTACGTAGAAGGTTTTCCAGCCTGAGAGTCGAACTTAGGC-AAGACACGGAGTCATGTTCTAGGCAGG-------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11087938 139 - 17224310 AGAGAGGAACCAGCTCTACCTAGAGGTAAGAAAACTTTTCATAGCTAAGGGTGTGGGATAAGAAGACAAGTTTTACGTAGAAGGTTTTCCAGCCTGAGAGTCGAACTTAGGC-AAGACACGGAGTCATGTTCTAGGCAGG-------- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400172 139 - 41321030 AGAGAGGAACCAGCTCTACCTAGAGGTAAGAAAACTTTTCATAGCTAAGGGTATGGGATAAGAAGACAAGTTTTAAGTAGAAGGTTTTCCAGGCTGAGAGTCGAACTTAGGC-AAGACACAGAGTCATGTTCTAGGCAGG-------- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473827 139 - 101219884 AGAGACCAACCAGCTCTACCTAGAGGTAAGAAAACTTTTCATAGCTAAGGGTGTGGGATAAGAAGACAAGTTTTAAGTAGAAGCTTTTCCAGGCTGAGAGTTGAACTTAGGC-AAGACACAGAGTCATGTTCTAGGCAGG-------- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856119 139 - 924385 AGAGAGGAACCAGCTCTACCTAGAGGTAAGAAAACTTTTCATAGCTAAGGGTGTGGGATAAGAAGACAAGTTTTAAGTAGAAGGTTTTCCAGGCTGAGAGTCGAACTTAGGC-AAGACACGGAGTCATGTTCTAGGCAGG-------- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699573 139 - 10587913 AGAGAGGAACCAGCTCTACCTAGAGGTAAGAAAACTTTTCATAGCTAAGGGTATGGGATAAGAAGACAAGTTTTAAGTAGAAGCTTTTCCAGGCTAAGAGTCGAACGTAGGC-AAGACACGGAGTCATGTTCTAGGCAGG-------- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019413 139 - 98464013 AGGGAGGAACCAGCTCTACCTAGAAGTTAGTAAACTTTTCGTAGCTAAGGGTGTGGGATAAGAAGACAAGTTTTAAGCAGAAGCGTTTCCAGACTGAGAGGCTAGCATAGGC-AGGACATGGAGTCATGCTCTAGGCAGG-------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27701928 139 + 27742158 AGGGAGTAACCAGCTCTACCTAGAAGTTACAAAACTTTTCATAGCTAAGGGTGTGGGATAAGAAGACAAGTTTTAAGCAGAAGAGTTTCCAGCCTGAGAGGCTAGCATAGGC-AAGACATGGAGTCATGCTCTAGGCAGG-------- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239250 138 - 4835464 AGGGAGGAATCAGAACTAGCTAGAAGATAGAAAATTTTTTATAGCGAAGGGTGTGGGATAAGAAGACAAGTTTTAAGCAGAAGGGTTT-CAGGCTGAGAGGCTAGCATAGGC-AAGACATGGAGTCATGCTCTAGGCAGG-------- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3698096 139 + 4093027 ACGGAGGAAACAGCTCTACCTAGAAGTTAGTAAACTTTTCATAGCTAAGGGTGTGGGATTAGAAGATAAGTTTTAAGCAGAAGGGTTTCCAGGCTGAGAGGCTAGCATAGGC-AAGACATGGAGTCATGCTCTAGGCAGG-------- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1597228 140 - 9149476 AGGGAGAAACCAGTTCTACTTAGAAGTGAGAAAACTCTTCCTAGCTATGGGTATGGGACAAGAAGACAAGCATTAAGTAAAAGCGTTTGCAGGCTGAGAGGCTAGCATAAGCAAAGAAACAGAATCATGTTCTAGGCAGG-------- i micMur3.chr32 C 0 I 724 s proCoq1.NW_012148064v1 568903 140 + 2414909 AGGGAGAAACCAGTTCTACCTAGAAGTGAGAAAAGTCTTCCTAGCTAAGCGTATGGGATAAGAAGACAAGTATTAAGTAAAAGGGTTTGCAGGCCAAGAGGCTATCATAAGCAAAGACACAGAATCATGTTCTAGGCAGG-------- i proCoq1.NW_012148064v1 I 187 I 9 s otoGar3.GL873534 11033633 135 + 30473821 AAGGAGAATCCAGGTCTACCTAGAAGTGAGCAAACGCCTCACA-----GAGTGTGGCATAAGAAGACAAGTACTAAGTAaaaggggttccaggcggagagggtagcaaaggcaaagacaaggaatcgtgttctaggcggg-------- i otoGar3.GL873534 C 0 I 8 s mm10.chr6 45729677 121 - 149736546 AGGGAAGGATCTTCTCAGACTAAAAGTTA-TAATCTCTGGAGAGCTAAGGGTTTGAGGTAAAAG--------TTAAGTTAAAATGTTT-TAGTTATACTGATCCGGATAGGCAAAGACACA---------TTTAGGCTAA-------- i mm10.chr6 C 0 I 4 s canFam3.chr20 16578900 136 + 58134056 agggaggacccagcattccttggaagttagaaaagtcttcctagctgagggtgtaagataagacaacaagaattaggtaaaagggtttccaggcagagaggcaagca-aggcagagacacagagatatac---aggtagg-------- i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1764056 143 - 2187301 AAGAGAGAACAAACTGTGTCTGGAAGGTA-CAAAGTCTTCAGGGTTAAGAGGGTAAGGTTAGAAGAAAAGTGTTAAATAaagggtttttcaggcagagtggctaggacagtcaaagaca----gtcatgtttgtgccaggaactaaag i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=2228517.000000 s hg38.chrUn_KI270749v1 85894 198 + 158759 CTGAT------------TAT------ATATTCCTGATTAACCTGCAATATAAGA-AGTCATTGAGAAAATGATTGAAAATATAACAGGCCAGAAATGCAGGTGAGAGTCAGGTAATTAAAAACTTTGATGTCCTGGTAAGAAATTTGTACTTAAACCTACACTAGTTGCAATCCACT---------TATGC-AGGGAAATGGAATA---TGTTCAGCATCATGG-----T-TT--AAA s panTro5.chr3 201973129 198 - 202621043 CTGAT------------TAT------ATATTCCTGATTAACCTGCAATATAAGA-AGTCATTgagaaagtgattgaaaatataacaggccagaaatgcaggtgagagtcaggtaattaaaaactttgatgtcctgctaagaaatttgtacttaaacctacaccagttgcaatccact---------tatgc-agggaaatggaata---tgttcagcaccatgg-----t-tt--taa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204741139 198 - 205426864 CTGAT------------TAT------ATATTCCTGATTAACCTGCAATATAAGA-AGTCATTGAGAAAGTGATTGAAAATATAACAGGCCAGAAATGCAGGTGAGAGTCAGGTAATTAAAAACTTTGATGTCCTGCTAAGAAATTTGTACTTAAACCTACACCAGTTGCAATCCACT---------TATGC-AGGGAAATGGAATA---TGTTCAGCACCATGG-----T-TT--AAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557680 198 + 86207423 CTGAT------------TAT------ATATTCCTGATTAACCTGCAATATAAGA-AGTCATTGAGAAAGTGATTGAAAATATAACAGGCCAGACATGCAGGTGAAGGTCAGGTAATTAAAAACTTTGATGTCATGCTAAGAAATTTCTACTTAAACCTACACTACTTGCAATCCTCT---------TATGC-AGGGAAATGGGCCA---TGTTCAGCATCATGG-----T-TT--AAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044274 198 + 204787373 CTGAT------------TAT------ATATTTCAGATTAACCTGCAATATGAGA-AGTCAGTGAGAAAGTGATTGAAAATAGAACAGGCCAGCAATGCAGGTGAGGGTCAGGTAATTAAAAATGTTGATACCATGCTAAGAAATTTCTACTTAAGCCTACACTAGTTGCAATCTACT---------TATGC-AGGGGAATGGAATA---TGTTCAGCATCATGG-----T-TT--ATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976119 198 - 192460366 CTGAT------------TAT------ATATTTCAGATTAACCTGCAATATGAGA-AGTCAGTGAGAAAGTGATTGAAAATAGAACAGGCCAGCAATGCAGGTGAGGGTCAGGTAATTAAAAATGTTGATACCATGCTAAGAAATTTCTACTTAAGCCTACACTAGTTGCAATCTACT---------TATGC-AGGGGAATGGAATA---TGTTCAGCATCATGG-----T-TT--ATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088077 198 - 17224310 CTGAT------------TAT------ATATTTCAGATTAACCTGCAATATAAGA-AGTCAGTGAGAAAGTGATTGAAAATAGAACAGGCCAGCAATGCAGGTGAGGGTCAGGTAATTAAAAATGTTGATACCATGCTAAGAAATTTCTACTTAAGCCTACACTAGTTGCAATCTACT---------TATGC-AGGGAAATGGAATA---TGTTCAGCATCATGG-----T-TT--ATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400311 198 - 41321030 CTGAT------------TAT------ATATTCCAGATTAACCTGCAATATAAGA-AGTCAGTGAGAAAGTGATTGAAAATAGAATAGGCCAGCAATGCAGGTGAGGGTCAGGTAATTAAAAATGTTGATACCATGCTAAGAAATTTCTACTTAAACCTACTCTAGTTGCAATCTACT---------TCTGC-AGGGGAATGGAATA---TGTTCAGCATCATGG-----T-TT--ATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64473966 198 - 101219884 CTGAT------------TAT------ATATTTCAGATTAATCTGCAATATAAGA-AGTCAGTGAGAAAGTGATTGAAAATAGAACAGGCCAGCAATGCAGGTGAGGGTCAGGTAATTAAAAATGTTGATACCATGCTAAGAAATTTCTACGTAAACCTACACTAGTTGCAATCTACT---------TATGC-AGGGGAATGGAATA---TGTTCAGCATCATGG-----T-TT--ATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856258 198 - 924385 CTGAT------------TAT------ATATTCCAGATTAACCTGCAATATAAGA-AGTCAGTGAGAAAGTGATTGAAAATAGAATAGGCCAGCAATGCAGGTGAGGGTCAGGTAATTAAAAATGTTGATACCATGCTAAGAAATTTCTACTTAAACCTACACTAGTTGCAATCTACT---------TATGC-AGGGGAATGGAATA---TGTTCAGCATCATGG-----T-TT--ATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699712 198 - 10587913 CTGAT------------TAT------ATATTCCAGATTAACCTGCAATATAAGA-AGTCAGTGAGAAAGTGATTGAAAATAGAACAGGCCAGCAATGCAGGTGAGGGTCAGGTAATTAAAAATGTTGATGCCATGCTAAGAAATTTCTACTTAAACCTACACTAGTTGCAATCCACT---------TATGC-AGGGGAATGGATTA---TGTTCAGCATCATGG-----T-TT--ATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019552 192 - 98464013 CTGGT------------TAT------GTATTCCTGATTAACCTGCAATGTAAGA-AATCATTGAGAAAGTGGTTGAAAAAAGAACAGGCCAGAAATGCAGGTGAGGGTCAGGTAATTAAAAACTTAGATGTCATGCT---GAATTTCTCCTTAAACTTACACAAGTTGCAATCCACT---------TATGC------AATAGAATA---TGTTCAGCATGATGG-----T-TTTAAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702067 192 + 27742158 CTAAT------------TAT------GTATTCCTGATTAACCTGCAATGTAAGA-AGTCATTGAGAAAGTGGTTGAAAATAGAACAAGCAGGAAATGCAGGTGAGGGTCAGGTAATTAAAAACTTTGATGTCATGCT---GAATTTCTACTTAAACCTACACAAGTTGCAATCCACT---------TATAA------AATGGAATA---TGCTCAGCCTGATAG-----T-TTTAAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239388 193 - 4835464 CTGAT------------TAT------GTATTCCTGATTAACCTGCAATGTAAGA-AGTCATTGAGAAAGTGGTTGAAAATAGAACAGGCCAGAAATGCAGGTGAGGGTCAGGTAATTAAAAATGTTGATGTCATGCT---GAATTTCTACTTAAACCTACACAAGTTGCAATCCACT---------TATGC------AATAGAATA---TGTTCAGCATGATGG-----TATTAAAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3698235 192 + 4093027 CTGAT------------TAT------GTATTCCTGATTAAACCGCAATGTAAGA-AGTCATTGAGAAAGTGGTTGAAAATAGAACAGGCTGGAAATGCAGGAGAGGGTCAGGTAATTAAAAACTTTGATGTCATGCT---GAATTTCCACCTAGACCTACACAAGTTACAATCCACT---------TATGC------AATAGAATA---TGTTCAGCATGATGG-----T-TTTAAAA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 569052 204 + 2414909 CTCAT------------TGC------GCATTCCTGATTAACCAgaagtataacg-agctaccaggaaagtggttgaaaatagaacaggccagaaatgca---aagggtcaggtaattaagaactttgatgtcatgataaaggatttatacttaaacctacccgtgttgggatacactgaggagttgtatgc-agaagaatgaaata---tgttcagcattgtgg-----t-tt--aaa i proCoq1.NW_012148064v1 I 9 C 0 s otoGar3.GL873534 11033776 204 + 30473821 gttaa------------tgc------atcttcctgattagcttgagatataagg-aaccactggaaaagtggttgcaaacagaacaggcctaaaatgca---aagggtcgggtaattaaggactttcatgtcatgctaaaaaatgtatacttcaacctacacctgttgggatccaccaaggagttgtttgc-aggagaatgaaata---tgttcagtattgtgt-----t-tt--aaa i otoGar3.GL873534 I 8 C 0 s mm10.chr6 45729802 204 - 149736546 CAAAC------------TTCCAGGTGATATTCCTGGTTGACCTAAATTGTCAGG-AACAACCAGGAAAGTCTTTGAAATTG----AGAGCAGAAACTCA-------GTAAGGTAATTAAAAGCCTTGGTGTCACGCTCTGGAGTTTTTACTTAAGTCTACACATGTTATGATCCCCA-AGGAGTTACATGCCAGAGCAGTAGAATA---TGTTCAACACCATGG-----T-TTTAGAA i mm10.chr6 I 4 C 0 s canFam3.chr20 16579037 225 + 58134056 tggatctacaaaaatgatac------ctattcctgattaacctgaaatacaaggtggcaactgggaaagtggttaaaaatacaataggccagaaatgcaggagagaatcagataattaaggacatggatatcatgctaaggagtttttacttcaacctatgtatgttggaatctactgaagagttatgagc-aggagaatgGAATA---TGTACAGCATCATGAAttttt-tt--aaa i canFam3.chr20 I 1 I 152 s dasNov3.JH563077 1764199 207 - 2187301 ctaat------------ta-------gtattcctgattaacctgaaatataagt-agcaacgagggaagcagttgaaaataaaataggtcaaaaaagcaggaaagggtcagaaaattaagcac-ttgatgccttgttagggaatttgtacttaaccctacacatgttgggatccactgaagagttttaaac-agagcaatagaataatttattcagcattgtta-----t-tt--ta- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=152432.000000 s hg38.chrUn_KI270749v1 86092 13 + 158759 AAAGGT-------------------------------------------------------TACTCTG s panTro5.chr3 201973327 13 - 202621043 aaaggt-------------------------------------------------------tactctg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204741337 13 - 205426864 AAAGGT-------------------------------------------------------TACTCTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557878 13 + 86207423 AAAGGT-------------------------------------------------------TACTCTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044472 13 + 204787373 AAAGGT-------------------------------------------------------TACTCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976317 13 - 192460366 AAAGGT-------------------------------------------------------TACTCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088275 13 - 17224310 AAAGGT-------------------------------------------------------TACTCTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400509 13 - 41321030 AAAGGT-------------------------------------------------------TACTCTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474164 13 - 101219884 AAAGGT-------------------------------------------------------TACTCTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856456 13 - 924385 AAAGGT-------------------------------------------------------TACTCTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699910 13 - 10587913 AAAGGT-------------------------------------------------------TACTCCG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019744 13 - 98464013 AAAGGT-------------------------------------------------------TACTCTG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702259 13 + 27742158 AAAGTT-------------------------------------------------------TCCTCTG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239581 13 - 4835464 AAAGGT-------------------------------------------------------TTCTCTG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3698427 13 + 4093027 AAAGGT-------------------------------------------------------TACTCTG i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 569256 13 + 2414909 aaaggt-------------------------------------------------------tactctg i proCoq1.NW_012148064v1 C 0 I 1383 s otoGar3.GL873534 11033980 13 + 30473821 aatggt-------------------------------------------------------tattctg i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45730006 13 - 149736546 AAGGGT-------------------------------------------------------TATGCAG i mm10.chr6 C 0 C 0 s canFam3.chr20 16579414 68 + 58134056 aaaggcaggcgccaaaccgctgctccacccagggatTACCGCATCATGATTTTTTTAAAGGTACTGTG i canFam3.chr20 I 152 C 0 s dasNov3.JH563077 1764406 13 - 2187301 aaaggt-------------------------------------------------------tactctg i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=974063.000000 s hg38.chrUn_KI270749v1 86105 95 + 158759 ATATCAGTGAAAagtgagacagcctattgtaatgttgaaaagctcatgcttta-gagagaggcagatctggatccaaatcatagccttaatttaaa s panTro5.chr3 201973340 95 - 202621043 ATATCAGTGAAAagtgagacagcctattgtaatgttgaaaagctcatgcttta-gagagaggcagatctggatccaaatcatagccttaatttaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204741350 95 - 205426864 ATATCAGTGAAAagtgagacagcctattgtaatgttgaaaagctcatgcttta-gagagaggcagatctggatccaaatcatagccttaatttaaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557891 95 + 86207423 ATATCAATGAAGagtgagacagcctattgtaatgttgaaaagctcatacttta-gagagaggcagatctggatccaaatcatagccttaatttaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044485 95 + 204787373 ATATCAATGAAGagggagacagcctattgtaatgttgaaaaactcatgctcta-gaaacaggcagatctggaaccaaatcatagccttaatttaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976330 95 - 192460366 ATATCAATGAAGagggagacagcctattgtaatgttgaaaaactcatgctcta-gaaacaggcagatctggaaccaaatcatagccttaatttaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088288 95 - 17224310 ATATCAATGAAGagggagacagcctattctaatgttgaaaaactcatgctcta-gaaacaggcagatctggatctaaatcatagccttaatttaaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400522 95 - 41321030 ATATCAATGAAGagggagacagcctattgtaatgttgaaaaactcatgctcta-gaaacaggcagatttggatccaaatcatagccttaatttaaa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474177 95 - 101219884 ATATCAATGAAGagggagacagcctattgtaatgttgaaaaactcatgctcta-gaaacaggcagatctggatccaaatcatagccttaatttaaa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856469 95 - 924385 ATATCAATGAAGagggagacagcctattgtaatgttgaaaaactcatgctcta-gaaacaggcagatctggatccaaatcatagccttaatttaaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6699923 95 - 10587913 ATATCAATGAAGagggagacagcctattgtaatgttgaaaaactcatgctcta-gagacaggcagatctggatccaaatcatagccttaatttaaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019757 95 - 98464013 GTATCAGTGAAAaaaaagacggcctattgtaatgttgaagagctcatgcttta-gagacaagcagagctgggtctaaatcttacccttaatttaaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702272 95 + 27742158 ATGTCAGTGAAAGgagagacagcctattgtaatgttgaagagctcatgtttta-gagacaggcagagctggatctaaatcttacccttaatttaaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 239594 95 - 4835464 ATATCAGTGAAAAGAGAAACAGCCTATTGTAATGTTGAAGAGTTCATGCTTTA-GAGACAGACAGAGCTGGATCTAAATCTTACCCTTAATTTAAA i cebCap1.NW_016107467v1 C 0 I 336 s aotNan1.NW_018502033v1 3698440 94 + 4093027 ATATCAGTGAAAagagagacagccta-tataatgttgaagagctcatgcttta-gagacaggcagagctggatctaaatcttacccttaatttaaa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11033993 96 + 30473821 gTAATAAGGAAGAGGGAGGCAGCTTATGGTAATGCTTAAGCACTCATGGTTTAGGAGACAGGCAGAACTGGATCAAAATCCCAGGCTTAATTTAAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45730019 44 - 149736546 ------------------AGAGTTATGTCTAATGT--------TCGTGTTTTT-AAA--AAGCAAA-CAGGATC---------------------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16579482 95 + 58134056 ACAACAATGCAGACAGTGgggacatctagtaatggtcaagagctcatgctcta-aagaaagacagaactgaatccaaactacagccttactttaaa i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1764419 95 - 2187301 gTAATACTGCAGAGGGAGGAGTTTCatagtaatgtttaagacttcctgcttta-gaaacagatttaactggatccaaaccatagctctaacttaaa i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I a score=584699.000000 s hg38.chrUn_KI270749v1 86200 61 + 158759 cctttaagccctaagc------------------agccttcagttttttcatacttaaaagttggataatagtatctat s panTro5.chr3 201973435 61 - 202621043 cctttaagccctgagc------------------agccttcagttttttcatacttaaaagttggataatagtatctat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204741445 61 - 205426864 cctttaagccctgagc------------------agccttcagttttttcatacttaaaagttggataatagtatctat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67557986 61 + 86207423 cctttaagccctaagc------------------agccttcagttttttcacacttaaaagttggataatagtatgtat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044580 61 + 204787373 cctttcagccctaagc------------------agccgtcagttttttcatacttaaaagttggataatagtatccat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976425 61 - 192460366 cctttcagccctaagc------------------agccgtcagttttttcatacttaaaagttggataatagtatccat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088383 61 - 17224310 cctttcagccctaagc------------------agccgtcagttttttcatacttaaaagttggataatagtatccat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400617 61 - 41321030 cctttcagccctaagc------------------agccttcagttttttcatacttaaaagttggataatagtatccat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474272 61 - 101219884 cctttcagccctaagc------------------agccttcagttttttcatacttaaaagttggataatagtatccat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856564 61 - 924385 cctttcagccctaagc------------------agccttcagttttttcatacttaaaagttggataatagtatccat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700018 61 - 10587913 cctttcagccctaagc------------------agccttcagttttttcatacttaaaagttggataatagtatccat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019852 61 - 98464013 actgtaagccctaagc------------------agccttcagatttctcatacttaaaagctggataatagtatctat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702367 61 + 27742158 actgtaagccctaagc------------------agccttcagttttctcatacttaaaagctggataatagtatctat i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3698534 61 + 4093027 actgtaagccctaagc------------------agccttcagttttctcatacttaaaagctggataatagtatctat i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11034089 48 + 30473821 ATTGTAAACCCTAAGT------------------AGCACTGGGTTTTTTCATGTGCAAA-------------CTTCTAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45730063 57 - 149736546 ----TAAGCCCTACAC------------------AGCCTTCTGTTATCTCATGGGCAAGCATCAAATAGCAGTATGCAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16579577 60 + 58134056 actgtaaaccctaagc------------------aaccttcagtgtgcttgtg-tgaaaagtcagataattatagccat i canFam3.chr20 C 0 I 488 s dasNov3.JH563077 1764514 79 - 2187301 actctaaactccaagcaagttactttatttctttagcattcagttttcttatatgcaaaagttggataatcatttctat i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e cebCap1.NW_016107467v1 239689 336 - 4835464 I a score=13600.000000 s hg38.chrUn_KI270749v1 86261 1 + 158759 g s panTro5.chr3 201973496 1 - 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chr3 204741506 1 - 205426864 g i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67558047 1 + 86207423 g i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044641 1 + 204787373 g i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976486 1 - 192460366 g i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088444 1 - 17224310 g i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400678 1 - 41321030 g i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474333 1 - 101219884 g i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856625 1 - 924385 g i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700079 1 - 10587913 g i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019913 1 - 98464013 g i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702428 1 + 27742158 g i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3698595 1 + 4093027 g i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11034137 1 + 30473821 G i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45730120 1 - 149736546 G i mm10.chr6 C 0 I 681 s dasNov3.JH563077 1764593 1 - 2187301 g i dasNov3.JH563077 C 0 I 184 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e cebCap1.NW_016107467v1 239689 336 - 4835464 I e canFam3.chr20 16579637 488 + 58134056 I a score=58732.000000 s hg38.chrUn_KI270749v1 86262 8 + 158759 cttggagt s panTro5.chr3 201973497 8 - 202621043 cttgcagT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204741507 8 - 205426864 cttgcagT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67558048 8 + 86207423 cttggagT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044642 8 + 204787373 cttggagT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976487 8 - 192460366 cttggagT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088445 8 - 17224310 cttggagT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400679 8 - 41321030 cttggagT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474334 8 - 101219884 cttggagT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856626 8 - 924385 cttggagT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700080 8 - 10587913 cttggagT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019914 8 - 98464013 tttggagg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702429 8 + 27742158 tttggagg i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3698596 8 + 4093027 tttggagg i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11034138 8 + 30473821 CTTAGGGT i otoGar3.GL873534 C 0 I 234 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 132379 913 + 958716 I e cebCap1.NW_016107467v1 239689 336 - 4835464 I e canFam3.chr20 16579637 488 + 58134056 I e dasNov3.JH563077 1764594 184 - 2187301 I a score=119727.000000 s hg38.chrUn_KI270749v1 86270 26 + 158759 acg-ggggg-------taagggagacggtatgaa s panTro5.chr3 201973505 33 - 202621043 GGG-GGGGGGGGGCGGTAAGGGAGACGGTATGAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204741515 28 - 205426864 AGC-GGGGG-----GGTAAGGGAGACGGTATGAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67558056 26 + 86207423 AGG-AGGGG-------TAAgggagactgtaagag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044650 26 + 204787373 AGG-GGAGG-------TAAGGTAGAGGGTACGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976495 26 - 192460366 AGG-GGAGG-------TAAGGTAGAGGGTACGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088453 26 - 17224310 AGG-GGAGG-------TAAGGTAGAGGGTACGAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400687 26 - 41321030 AGG-GGAGG-------TAAGGTAGAGGGTACGAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474342 26 - 101219884 AGG-GGAGG-------TAAGGTAGAGGGTACGAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856634 26 - 924385 AGG-GGAGG-------TGAGGTAGAGGGTACGAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700088 26 - 10587913 ACG-GGAGG-------TAAGGGAGAGGGTATGAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019922 26 - 98464013 AGC-GGAGT-------TAAAAAGGAGGGTAAGAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702437 27 + 27742158 ggcgggggt-------taaGAGGAAGGGTAAGAG i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3698604 27 + 4093027 ggcgggggt-------taagagggaGGGTAAGAG i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 133292 26 + 958716 tcg-aggtt-------taaacgcaatagtataaa i tarSyr2.KE939134v1 I 913 I 141 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e otoGar3.GL873534 11034146 234 + 30473821 I e cebCap1.NW_016107467v1 239689 336 - 4835464 I e canFam3.chr20 16579637 488 + 58134056 I e dasNov3.JH563077 1764594 184 - 2187301 I a score=25662.000000 s hg38.chrUn_KI270749v1 86296 3 + 158759 tgt s panTro5.chr3 201973538 3 - 202621043 TGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204741543 3 - 205426864 TGT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67558082 3 + 86207423 tgt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044676 3 + 204787373 TGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976521 3 - 192460366 TGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088479 3 - 17224310 TGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400713 3 - 41321030 TGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474368 3 - 101219884 TGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856660 3 - 924385 TGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700114 3 - 10587913 TGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019948 3 - 98464013 TGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702464 3 + 27742158 TGT i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3698631 3 + 4093027 TGT i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133318 141 + 958716 I e otoGar3.GL873534 11034146 234 + 30473821 I e cebCap1.NW_016107467v1 239689 336 - 4835464 I e canFam3.chr20 16579637 488 + 58134056 I e dasNov3.JH563077 1764594 184 - 2187301 I a score=1129158.000000 s hg38.chrUn_KI270749v1 86299 2186 + 158759 taagagactaatgagacagaaagttaacaaggatatccaggaattgaactcagctctgaaccaagcagacctaatagacatctacagaactctcca-cccaaatcaacagaatatacattcttctcagcaccacatcgcacttattccaaaattgaccacatagttggaagtaaaacattcctcagcaaatgtaaaagaacagaaattataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactcactcaaaactgctcaactacatggaaactgaaaaacctgctcctgaatgactactgggtacataacaaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacatactagaatctctgggacatatttaaagaagtgtgtagagggaaatgtatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacagttaaaagaactagagaagcaagagtaaacacattcaaaagctagcagaaggcaagaaataactaagagcagaacggaaggagatagagacacaaaaaaacccttcaaaaaa--tcaatgaatccaggagctggttttttgaaaagatcaacaaaattgatagaccactagcaagactaataaagaagaagagagagaagaatcaaatagacgcaataaaaaatgataaaggggacatcaccaccaatcccgcagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatctagaagaaatggataaattcctggaaacgtacaccctcccaagactaaaccaggaagaagttgaatccctggatagacctacaaaaggctctgaaattggggcaataattaatagcctaccaaccaaaaaaagtccaggaccagacggattcacagctgaattctaccagaggtacaaggaggagctggtaccattccttctgaaactattccaatcaatagaaggagagggaatcctcccggactcattttatgaggccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagagaattttagaccaatatccctgatgaacatcgatgcaaaa-tcctcaataaaatactggcaaaccaaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcattcctgggatgcaaggctgggtcaacatacgcaaatcaataaacataatccagcatataaatagaaccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaaaaaggcttcatgctaaaaactctcaataaattaggtattaatgggacgtaattcgaaatagtaagagctatttatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcaatcccggtgaaaactggcacaagacagggatgccctctctcaccactcctattctacatagtgttggaagttctggccaggacaatcaggcaggagaaagacataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgactgtatatttagaaaaccgcattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagtatttttatacaccaataacaaac----tgatagccaaagcataagtgaacacccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaagccacaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcatgaaaatggccatactgcccaaggtaatttgtaggttcaatgccatcccctttcaagctaccaatgactttcttcacagaattggaaaaaactactttaaag-ttcatatggaaccaaaaaagagcccacattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagtaacca s panTro5.chr3 201973541 2180 - 202621043 TAAGagactaatgagacagaaagttaacaaggatatccaggaattggactcagctctgaaccaagcagacctaatagacatctacagaactctcca-cccaaatcaacagaatatacattcttctcagcaccacatcgcacttattccaaaattgaccacatagttggaagtaaaacattcctcagcaaatgtaaaagaacagaaattataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaatctcactcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacacaacatactagaatctctgggacatatttaaagcagtgtgtagggggaaatgtatagcactaaatgcccacaatagaaagcaggaaagatctaaaattgacaccctaacatcacagttaaaagaactagagaagcaagagtaaacacattccaaagctaggagaaggcaagaaataactaagagcagaacggaaggagatagagacacaaaaaaacccttcaaaaaaaatcaatgaatccaggagctggttttttgaaaagatcaacaaaattgatagaccactagcaagaccaataaagaagaaaagagagaagaatcaaata---------aaaaatgataaaggggacatcaccaccgatcccatagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatctagaagaaatggataaattcctggaaacatacaccctcccaagactaaaccaggaagaagttgaatccctgaatagacctataacaggctctgaaattggggcaataattaatagcctaccaaccaaaaaaagtccaggaccagacggattcacagttgaattctaccagagatacaaggaggagctggtaccattccttctgaaactattccaatcaacagaaggagagggaatcctcccggactcattttatgaggccagcatcatcctgatatcaaagcctggcaaagacacaacagaaaaagagaattttagaccaatatccttgatgaacatcgatgcaaaaatcctcaataaaatactggcaaaccaaatccagcagcacatcaaaaagcttatccaccatgatcaagtgcgcttcatccctgggatgcaaggctggttcaacacatgtaaatcaataaacataatccagcatataaatagaaccaaagacaaaaaccacatgattatctcaatagacgcagaaaaggcctttgacaaaattcaacaacgcttcatgctaaaaactctcaataaattaggtattcatgggaagtaactcaaaatagtaagagctatttatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcaatcccggtgaaaactggcacaagacagggatgccctctctcaccactcctattctacatagtgttggaagttctggccagggcaatcaggcaggagaaagacataaagggaattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtgtatttagaaaaccgcattgtctcagcccaaaatctccttaagctgataagcaagttcaggaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagtatttttatacgccaataacagacaatctgagagccaaagcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagagatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaagccacaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcatgaaaacggccatactacccaaggtaatttgcaggttcaatgccatcccctt-caagctaccaatgactttcttcatagaattggaaaaaactactttaaag-ttcatatggaaccaaaaaagagcccacattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgactt---actatactacaaggcaatagtaacca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204741546 2180 - 205426864 TAAGagactaatgagacagaaagttaacaaggatatccaggaattgaactcagctctgaaccaagcagacctaatagacatctacagaactctcca-cccaaatcaacagaatatacattcttctcagcaccacatcgcacttattccaaaattgaccacatagttggaagtaaaacattcctcagcaaatgtaaaagaacagaaattataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactcactcaaaactgctcaactacatggaaactgaacaacctgctcctgaatgactactgggtacataacaaaatgaaggcagaaataaagatgttctttgaaatcaacgagaacaaagacacaacatactagaatctctgggacatatttaaagcagtgtgtagggggaaatgtatagcactaaatgcccacaatagaaagcaggaaagatctaaaattgacaccctaacatcacagttaaaagaactagagaagcaagagtaaacacattccaaagctaggagaaggcaagaaataactaagagcagaacggaaggagatagagacaccaaaaaacccttcaaaaaaaatcaatgaatccaggagctggttttttgaaaagatcaacaaaattgatagaccactagcaagaccaataaagaagaaaagagagaagaatcaaata---------aaaaatgataaaggggacatcaccaccgatcccatagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatctagaagaaatggataaattcctggaaacatacaccctcccaagactaaaccaggaagaaggtgaatccctgaatagacctataacaggctctgaaattggggcaataattaatagcctaccaaccaaaaaaagtccaggaccagacggattcacagttgaattctaccagagatacaaggaggagctggtaccattccttctgaaactattccaatcaacagaaggagagggaatcctcccggactcattttatgaggccagcatcatcctgatatcaaagcctggcaaagacacaacagaaaaagagaattttagaccaatatccttgatgaacatcgatgcaaaaatcctcaataaaatactggcaaaccaaatccagcagcacatcaaaaagcttatccaccatgatcaagtgcgcttcatccctgggatgcaaggctggttcaacacatgtaaatcaataaacataatccagcatataaatagaaccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaacgcttcatgctaaaaactctcaataaattaggtattgatgggaagtaactcaaaatagtaagagctatttatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcaatcccggtgaaaactggcacaagacagggatgccctctctcaccactcctattctacatagtgttggaagttctggccagggcaatcaggcaggagaaagacataaagggaattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtgtatttagaaaaccgcattgtctcagcccaaaatctccttaagctgataagcaagttcaggaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagtatttttatacgccaataacagacaatctgagagtcaaagcatgagtgaactcccattcacacttgcttcaaagagaataaaatacctaggaatccaacttacaagagatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaagccacaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcatgaaaacggccatactacccaaggtaatttgcaggttcaatgccatcccctt-caagctaccaatgactttcttcatagaattggaaaaaactactttaaag-ttcatatggaaccaaaaaagagcccacattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgactt---actatactacaaggcaatagtaacca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67558085 2170 + 86207423 taagacactaatgagacagaaagttaacaaggatatccaggaattgaactcagctctgcaccaagcagacctaatagacatctacataactctccaccccaaatcaacagaatatacattcttctcagcaccacatcacacttattccaaaattgaccacatagttggaagtaaaacattcctcagcaaatgtaaaagaacagaaattataacaaactgtctctgggaccacagtgcaatcaaact--------------agaaactcactcaaaaccgctcaactatatggaaactgaacaacatgctcctgaatgactactgggtacataacgaaatgaaggcagaaatgaagatcttctttgaaaccaatgagaacaaagacacaacataccagaatctctgggacacattcaaagcagtgtgtagagggaagtgtatagcactaaatgcccacaacagaaagcaggaaagatctaaaattgacaccctaacatcacagttaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagagcagaatggaaggagatagagacac-aacaaacccttcaaaaaa--ttaatgaatccaggagctggttttttgaaaagatcaacaaaattgatagactgctagcaagactaataaagaagaaaagagagaagaatcaaatagacacaataaaaaatgataaaggggatatcaccacagatcccacagaaatacaaactaccatcagagaatactataaacacctctacacaaataaactagaaaatctagaagaaatggataaatttctggaaacatacaacccctcaagactaaaccaggaagaagttgaatccctaaatagacctataacaggctctg-aattgaggcaataattaatagcctaccaaccaaaaaaagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggagctggtaccattccttctgaaactgttccaatcaatagaaagagagggaatcctccctgactcattttatgaggccagcatcatcctgataccaaagcctggcagaggcacaataaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaaccaaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaacatacacaaatcaataaacataataaagcatataaacagaaccaaagacaaaaaccacatgagtatctcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtattgatggaacttatcacaaaataataagagctatttatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcaatccctgtgaaaactggaacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctgtccagcgcaatcaggcaggagaaaaaaataaaaggtattcagttaggaaaagaggaagtcaaattgt-cctgtttgcagatgacatgattgtatatttagaaaactgcactgtctcagcccaaaatatccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagtatttttatacaccaataacagacaaacagagagccaaagcatgagcgaacgcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaacaaaataaaagaagccacaaacatatggaagaacattccatgctcatggataggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttgtagattcaatgccatcccctt-caagctaccaatgactttcttcacagaattggaaaaaactactttaaagtttcatatggaacc-aaaaagagtccacattgccaatcatttcctacgccaaa--gacaaagctggaggcatca-gctacctgaccttcaagtatactac-aggctatagtaacca i nomLeu3.chr21 C 0 M 878 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133318 141 + 958716 I e otoGar3.GL873534 11034146 234 + 30473821 I e manLeu1.NW_012098965v1 856663 0 - 924385 C e macNem1.NW_012018021v1 11088482 0 - 17224310 C e rheMac8.chr2 66044679 0 + 204787373 C e aotNan1.NW_018502033v1 3698634 0 + 4093027 C e cebCap1.NW_016107467v1 239689 336 - 4835464 I e canFam3.chr20 16579637 488 + 58134056 I e dasNov3.JH563077 1764594 184 - 2187301 I e saiBol1.JH378125 27702467 0 + 27742158 C e calJac3.chr15 46019951 0 - 98464013 C e colAng1.NW_012114711v1 6700117 0 - 10587913 C e chlSab2.chr22 64474371 0 - 101219884 C e cerAty1.NW_012009469v1 17400716 0 - 41321030 C e macFas5.chr2 60976524 0 - 192460366 C a score=249870.000000 s hg38.chrUn_KI270749v1 88485 909 + 158759 aaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaacagagccctcagaaataataccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaaggtggattaaagacttacatgttagacctaaaaccacaaaaaccctagaagaaaacctaggcaataccattcaggacataggaatgggcaaggacttcatgcctaaaacaccaaaagcaatggcaacaaaagccaaaatttacaaataggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagcaaacaggcaacctacagaatgggagaaaatttttgcaatctactcatctgacaaagggctaatatccagaatctacaaagaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggtgaaggctatgaatagacacttctcaaaagaagacatttatgcagccaacagacatatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaataagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaagaggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccattgtggaagacagtgtggcgattcctcaaggatctagaactagaaataccatttgacccatccatcccattactgggtatatacccaaaggattataaatcatact s panTro5.chr3 201975721 909 - 202621043 aaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataataccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagtcatatgtagaaagctgaaactggatcccttccttacaccttacacaaaaattaattcaagatggattaaagacttacatgctagacctaaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggaatggacaaggacttcatgcctaaaacaccaaaagcaatggcaacaaaagccaaaattgaaaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagcgaacaggcaacctacagaatgggagaacatttttgcaatctactcatctgtcaaagggctaatatccagaatctacaaagaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggtgaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacatatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaataagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaagaggtgctagagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccattgtggaagacagtgtggcgattcctcagggatctagaactagaaataccatttgacccagccatccctttactgggtatatacccaaaggattataaatcatact i panTro5.chr3 C 0 C 0 s panPan2.chr3 204743726 908 - 205426864 aaacagcatagtactggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataataccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttacacaaaaattaattcaagatggattaaagacttacatgctagacctaaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggaatgggcaaggacttcatgcctaaaacaccaaaagcaatggcaacaaaagccaaaattgaaaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagcgaacaggcaacctacagaatgggagaacatttttgcaatctactcatctgacaaagggctaatatccagaatctacaaagaactcaaacaaatttacaag-aaaaaacaaacaaccccatcaaaaagtgggtgaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacatatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaataagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaagaggtgctagagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccattgtggaagacagtgtggcgattcctcagggatctagaactagaaataccatttgacccagccatccctttactgggtatatacccaaaggattataaatcatact i panPan2.chr3 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133318 141 + 958716 I e otoGar3.GL873534 11034146 234 + 30473821 I e manLeu1.NW_012098965v1 856663 0 - 924385 C e macNem1.NW_012018021v1 11088482 0 - 17224310 C e rheMac8.chr2 66044679 0 + 204787373 C e aotNan1.NW_018502033v1 3698634 0 + 4093027 C e cebCap1.NW_016107467v1 239689 336 - 4835464 I e canFam3.chr20 16579637 488 + 58134056 I e dasNov3.JH563077 1764594 184 - 2187301 I e saiBol1.JH378125 27702467 0 + 27742158 C e calJac3.chr15 46019951 0 - 98464013 C e colAng1.NW_012114711v1 6700117 0 - 10587913 C e chlSab2.chr22 64474371 0 - 101219884 C e cerAty1.NW_012009469v1 17400716 0 - 41321030 C e macFas5.chr2 60976524 0 - 192460366 C e nomLeu3.chr21 67560255 878 + 86207423 M a score=230228.000000 s hg38.chrUn_KI270749v1 89394 442 + 158759 gctataaaggcacatgcacatgtatgtttattcacaatagcaaagacttggaaccaacccaaatgtccatcaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggatgagttcatgtcctttgtaggaacatggatgaagctggaaaccatcattctgagcaaactatcgcaagaacaaaaaacaaaacactgcatgttctcactcataggtgggaattgaacaataagaacacttagacacaggaaggggaacatcacacactgggatctgtagttgagtcagaggaggggggagggagagtattaggagaaatatctaatataaatgacgagttaatgggtgcagcacacgaacatggtacatttatacatatgtaacaaacctgcacgtggtgcacatgtaccct s panTro5.chr3 201976630 442 - 202621043 gctataaaggcacatgcacacgtatgtttattcacaatagcaaagacttggaaccaacccaaatgtccatcaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcacaggaacaaaaaacgaaacactgcatgttctcactcataggtgggaattgaacaataagaacacttggacacaggaaggggaacatcacacactggggtctgtagtggggtcggaggaggggggagggaaagcattaggagaaatatctaatataaatgacgagttaatgggtgcagcacaccaacatggtacatttatacatatgtaacaaacctgcacgttgtgcacatgtaccct i panTro5.chr3 C 0 C 0 s panPan2.chr3 204744634 442 - 205426864 gctataaaggcacatgcacacgtatgtttattcacaatagcaaagacttggaaccaacccaaatgtccatcaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcacaggaacaaaaaacgaaacactgcatgttctcactcataggtgggaattgaacaataagaacacttggacacaggaaggggaacatcacacactggggtctgtagtggggtcggaggaggggggagggaaagcgttaggagaaatatctaatataaatgacgagttaatgggtgcagcacaccaacatggtacatttatacatatgtaacaaacctgcacgttgtgcacatgtaccct i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561133 440 + 86207423 gctataaaggcacatgcacacgtatgtttattcacaatagcaaagacttggaaccaacccaaatgtccatcaacgatagactgga-taagaaaatgtggcacatatacaccatggaatactatgccgccgtaaaaaa-gatgagttcatgtcctttgtagggacatggatgaagctggaaatcatcattctcatcaaactatcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaactgaacaatgagaacacttggacacaggaaggagaacatcacacactggggcctgtagtggggtagggggaggggggagggatagcattaggagatacacgtaatgtaaatgacgagttaatgggtgcagcacaccaacatggtacatgtatacatatgtaacaaatctgcacattgtgcacatgtaccct i nomLeu3.chr21 M 878 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133318 141 + 958716 I e otoGar3.GL873534 11034146 234 + 30473821 I e manLeu1.NW_012098965v1 856663 0 - 924385 C e macNem1.NW_012018021v1 11088482 0 - 17224310 C e rheMac8.chr2 66044679 0 + 204787373 C e aotNan1.NW_018502033v1 3698634 0 + 4093027 C e cebCap1.NW_016107467v1 239689 336 - 4835464 I e canFam3.chr20 16579637 488 + 58134056 I e dasNov3.JH563077 1764594 184 - 2187301 I e saiBol1.JH378125 27702467 0 + 27742158 C e calJac3.chr15 46019951 0 - 98464013 C e colAng1.NW_012114711v1 6700117 0 - 10587913 C e chlSab2.chr22 64474371 0 - 101219884 C e cerAty1.NW_012009469v1 17400716 0 - 41321030 C e macFas5.chr2 60976524 0 - 192460366 C a score=13810.000000 s hg38.chrUn_KI270749v1 89836 22 + 158759 agaacttaaagtataataataa s panTro5.chr3 201977072 22 - 202621043 agaacttaaagtataataataa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745076 22 - 205426864 agaacttaaagtataataataa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561573 22 + 86207423 aaaacttaaagtataataataa i nomLeu3.chr21 C 0 C 0 s tarSyr2.KE939134v1 133459 22 + 958716 AGGAGTTGAAGGGTAAGGGTGG i tarSyr2.KE939134v1 I 141 I 891 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e otoGar3.GL873534 11034146 234 + 30473821 I e manLeu1.NW_012098965v1 856663 0 - 924385 C e macNem1.NW_012018021v1 11088482 0 - 17224310 C e rheMac8.chr2 66044679 0 + 204787373 C e aotNan1.NW_018502033v1 3698634 0 + 4093027 C e cebCap1.NW_016107467v1 239689 336 - 4835464 I e canFam3.chr20 16579637 488 + 58134056 I e dasNov3.JH563077 1764594 184 - 2187301 I e saiBol1.JH378125 27702467 0 + 27742158 C e calJac3.chr15 46019951 0 - 98464013 C e colAng1.NW_012114711v1 6700117 0 - 10587913 C e chlSab2.chr22 64474371 0 - 101219884 C e cerAty1.NW_012009469v1 17400716 0 - 41321030 C e macFas5.chr2 60976524 0 - 192460366 C a score=3630.000000 s hg38.chrUn_KI270749v1 89858 9 + 158759 TAATAATAA s panTro5.chr3 201977094 9 - 202621043 TAATAATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745098 9 - 205426864 TAATAATAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561595 9 + 86207423 TAATATAAA i nomLeu3.chr21 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I e otoGar3.GL873534 11034146 234 + 30473821 I e manLeu1.NW_012098965v1 856663 0 - 924385 C e macNem1.NW_012018021v1 11088482 0 - 17224310 C e rheMac8.chr2 66044679 0 + 204787373 C e aotNan1.NW_018502033v1 3698634 0 + 4093027 C e cebCap1.NW_016107467v1 239689 336 - 4835464 I e canFam3.chr20 16579637 488 + 58134056 I e dasNov3.JH563077 1764594 184 - 2187301 I e saiBol1.JH378125 27702467 0 + 27742158 C e calJac3.chr15 46019951 0 - 98464013 C e colAng1.NW_012114711v1 6700117 0 - 10587913 C e chlSab2.chr22 64474371 0 - 101219884 C e cerAty1.NW_012009469v1 17400716 0 - 41321030 C e macFas5.chr2 60976524 0 - 192460366 C a score=123794.000000 s hg38.chrUn_KI270749v1 89867 15 + 158759 TAA---GAGACTAATGAA s panTro5.chr3 201977103 18 - 202621043 TAAAAAGAGACTAATGAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745107 15 - 205426864 AAA---GAGACTAATGAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561604 15 + 86207423 AAA---GAGACTAATGAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044679 15 + 204787373 TAA---GAGACAAATGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976524 15 - 192460366 TAA---GAGACAAATGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088482 15 - 17224310 TAA---GAGACAAATGAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400716 15 - 41321030 TAA---GAGACGAATGAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474371 15 - 101219884 TAA---GAGACTAATGAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856663 15 - 924385 TAA---GAGACTAATGAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700117 15 - 10587913 TAA---GAGACTAATGAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019951 15 - 98464013 TAA---GAGACCAATGAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702467 15 + 27742158 TAA---GAGACTAATGAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240025 15 - 4835464 TAA---GAGACTAATGAA i cebCap1.NW_016107467v1 I 336 C 0 s aotNan1.NW_018502033v1 3698634 15 + 4093027 TAA---GAGACTAATGAA i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I e otoGar3.GL873534 11034146 234 + 30473821 I e canFam3.chr20 16579637 488 + 58134056 I e dasNov3.JH563077 1764594 184 - 2187301 I a score=148540.000000 s hg38.chrUn_KI270749v1 89882 15 + 158759 AGGACTCAGGAATCA s panTro5.chr3 201977121 15 - 202621043 AGGACTCAGGAATCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745122 15 - 205426864 AGGACTCAGGAATCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561619 15 + 86207423 AGGACTCAGGAATCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044694 15 + 204787373 AGGACTCAGGAATTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976539 15 - 192460366 AGGACTCAGGAATTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088497 15 - 17224310 AGGACTCAGGAATTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400731 15 - 41321030 AGGACTCAGGAATTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474386 15 - 101219884 AGGACTCAGGAATTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856678 15 - 924385 AGGACTCAGGAATTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700132 15 - 10587913 AGGACTCAGGAATTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019966 15 - 98464013 AGGACTCAGGAATTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702482 15 + 27742158 AGGGCTCAGGAATTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240040 15 - 4835464 AGGACTCAGGAATTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3698649 15 + 4093027 AGGACTCAGGAATTA i aotNan1.NW_018502033v1 C 0 C 0 s dasNov3.JH563077 1764778 15 - 2187301 AAGACTAAGGTGGCA i dasNov3.JH563077 I 184 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I e otoGar3.GL873534 11034146 234 + 30473821 I e canFam3.chr20 16579637 488 + 58134056 I a score=415902.000000 s hg38.chrUn_KI270749v1 89897 48 + 158759 GAAATGGAGAAAG---GGTAAACCTATCCAAGAAACTC-AAAAGAAAATAAA s panTro5.chr3 201977136 48 - 202621043 GAAATGGAGAAAG---GGTAAACCTATTCAAGAAACTC-AAAAGAAAATAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745137 48 - 205426864 GAAATGGAGAAAG---GGTAAACCTATTCAAGAAACTC-AAAAGAAAATAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561634 48 + 86207423 GAAATGGAGAAAG---GGTAAACCTATTCAAGAAACTC-AAAAGAAAATAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044709 48 + 204787373 GAAATAGAGAAAA---GGTAAACCTATTCAAGAAACTC-AAAAGAAAATAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976554 48 - 192460366 GAAATAGAGAAAA---GGTAAACCTATTCAAGAAACTC-AAAAGAAAATAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088512 48 - 17224310 GAAATAGAGAAAA---GGTAAACCTATTCAAGAAACTC-AAAAGAAAATAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400746 48 - 41321030 GAAATAGAGAAAA---GGTAAACCTATTCAAGAAACTC-AAAAGAAAATAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474401 48 - 101219884 GAAATAGAGAAGA---GGTAAACCTACTCAAGAAACTC-AAAAGAAAATAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856693 48 - 924385 GAAATAGAGAAAA---GGTAAACCTATTCAAGAAACTC-AAAAGAAAATAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700147 48 - 10587913 GAAATGGAGAAAA---GGTAAACCTATTCAAGAAACTC-AAAAGAAAATAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46019981 47 - 98464013 GAAATGGAGAAAG---GGTAAACCTATTCAGTAAACTT--AAATAGAGCAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702497 47 + 27742158 GAAATGGAGAAAG---GGTAAACCTATTCAGTAAACTT--AAATAGAATAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240055 47 - 4835464 GAAATGGAGAAAG---AGTAAACCTATCCAGTAAACTT--AAATAGAATAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3698664 47 + 4093027 GAAATGGAGAAAG---GGTAAACCTATTCAGTAAACTT--AAATAGAATAAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11034380 47 + 30473821 GACAGGGAGAAAG---TGTGGACCTATTCAGGAAATTA--AAAAAAAAAAGA i otoGar3.GL873534 I 234 C 0 s dasNov3.JH563077 1764793 52 - 2187301 CCAGTGTATGAAGCATTGTGGACTTTTCCAGAGAACTTTTTTAAAAGATAGA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I e canFam3.chr20 16579637 488 + 58134056 I a score=500793.000000 s hg38.chrUn_KI270749v1 89945 47 + 158759 ATCCAGGACTTTCTGAGTGGTATGAGGTGGAAAAGCTGGGGAAAATG s panTro5.chr3 201977184 47 - 202621043 ATCCAGGACTTTCTGAGTGGTATGAGGTGGAAAAGCTGGGGAAAATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745185 47 - 205426864 ATCCAGGACTTTCTGAGTGGTATGAGGTGGAAAAGCTGGGGAAAATG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561682 47 + 86207423 ATCCAAGACTTTCTGAGTGGTATGAGGTGGAAAAAGTGGGGAAAATG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044757 47 + 204787373 ATCAAGGACTTTCTGAGTGGTATGAGGTGGAAAAGGTGGGGAAAATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976602 47 - 192460366 ATCAAGGACTTTCTGAGTGGTATGAGGTGGAAAAGGTGGGGAAAATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088560 47 - 17224310 ATCAAGGACTTTCTGAGTGGTATGAGGTGGAAAAGGTGGGGAAAATG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400794 47 - 41321030 ATCAAGGACTTTCTGAGTGGTATGAGGTGGAAAAGGTGGGGAAAATG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474449 47 - 101219884 ATCAAGGACTTTCTGAGTGGTATGAGGTGGAAAAGGTGGGGAAAATG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856741 47 - 924385 ATCAAGGACTTTCTGAGTGGTATGAGGTGGAAAAGGTGGGGAAAATG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700195 47 - 10587913 ATCAAGGACTTTCTGAGTGGTATGAGGTGGAAAAGGTGGGGAAAACG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46020028 47 - 98464013 ATCAAGGACTTTCTCAGTGGTATGAGGTGAAAATGGTGGGGAAAATG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702544 47 + 27742158 ATCAAGGACTTTCTCAGTGGTATGAGGTGAAAACAGTGGGGAAAATG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240102 47 - 4835464 ATCAAGGACTTTCTCAGTGGTATGAGGCGAAAATGGTGGGGAAAATG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3698711 47 + 4093027 ATCAAGGACTTTCTCAGTGGTATGAGGTGAAAACGGTGGGGAAAATG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11034427 44 + 30473821 ATCACGGATTTTCTGAGAGATGTGAGG-GATAAAAGTGGGGAACA-- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16580125 35 + 58134056 ACCTAGGACCTTCTGAGTTATATGAGGTGGAAAAG------------ i canFam3.chr20 I 488 C 0 s dasNov3.JH563077 1764845 44 - 2187301 ATCAAGGACTTTCTGAGTGATACGAGCTGGGAAAGGGAGTAAAA--- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e micMur3.chr32 1597368 724 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I a score=1051941.000000 s hg38.chrUn_KI270749v1 89992 97 + 158759 GAAGATGAAACTGAGCTTTCTGTTGTT-GG-GGAT--GGAGAAAGATGGTGTATCATTCTCTTGGCCACAGAGACTGGTAGCATTTGGAATCAGAAAGGTT s panTro5.chr3 201977231 97 - 202621043 GAAGATGAAACTGAGCTTTCTGTTGTT-GG-GGAT--GGAGAAAGATGGTGTATCATTCTCTTGGCCACAGAGACTGGTAGCATTTGGAATCAGAAAGGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745232 97 - 205426864 GAAGATGAAACTGAGCTTTCTGTTGTT-GG-GGAT--GGAGAAAGATGGTGTATCATTCTCTTGGCCACAGAGACTGGTAGCATTTGGAATCAGAAAGGTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561729 97 + 86207423 GAAGATGAAACTGAGCTTTCTGTTGTT-GG-GGAT--GGAGAAAGACGGTGTGTCATTCTCTTGGCCACAGAGACTGGTAGCATTTGGAATCAGAAAGGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044804 93 + 204787373 GAAGATGAAACTGAGCTTTCTGTTGTT-GG-GGAG--GGAGGAAGATGGTGTATTACTCTCTTGACCACAGAGACT----GCATTTGGAATCAGAAAGTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976649 93 - 192460366 GAAGATGAAACTGAGCTTTCTGTTGTT-GG-GGAG--GGAGGAAGATGGTGTATTACTCTCTTGACCACAGAGACT----GCATTTGGAATCAGAAAGTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088607 93 - 17224310 GAAGATGAAACTGAGCTTTCTGTTGTT-GG-GGAG--GGAGGAAGATGGTGTATTACTCTCTTGACCACAGAGACT----GCATTTGGAATCAGAAAGTCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400841 93 - 41321030 GAAGATGAAACTGAGCTTTCTGTTGTT-GG-GGAG--GGAGGAAGATGGTGTATTACTCTTTTGACCACAGAGACT----GCATTTGGAATCAGAAAGGCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474496 93 - 101219884 GAAGATGAAACTGAGCTTTCTGTTGTT-GG-GGAG--GGAGGAAGATGGTGTATTACTCTCTTGACCACAGAGACT----GCATTTGGAATCAGAAAGGCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856788 93 - 924385 GAAGATGAAACTGAGCTTTCTGTTGCT-GG-GGAG--GGAGGAAGATGGTGTATTACTCTTTTGACCACAGAGACT----GCATTTGGAATCAGAAAGGCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700242 93 - 10587913 GAAGATGAAGCTGAGCTTTCTATTGTT-GG-GGAT--GGAGGAAGATGGTGTATTACTCTCTTGGCCACAGAGACT----GCATTTGGAATCAGAAAGGCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46020075 97 - 98464013 GAAGATAAAACTGAGTTTTCTGGTGTT-GA-GGAT--GGAGGAAGATGGTGTATTATTTTCTTGGCCACAAAGATTGGTAGCATTTGGAGTCAGAAAGGGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702591 97 + 27742158 GAACATAAAACTGAGTTTTCTGGTGTT-GT-GGAA--GGAGGAAGATGGTGTATTATTCTCTTGGCCACAGAGATTGGTAGCATTTGGAGTCAGAAAAGGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240149 97 - 4835464 GAATATGAAACTGAGTTTTCTGGTGTT-GT-GGAT--GGAGGAAGATGGTGTATTATTCTCTTGGCCACGGAGATTGGTAGCGTTTGGAGTCAGAAAGGGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3698758 97 + 4093027 GAAGATAAAACTGAGTTTTCTGGTTTT-GT-GGAT--GGAGGAGGATGGTGTAGTATTCTCTTGGCCACAGAGATTGGTAGCATTTGGAGTCAGAAAGGAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1598092 98 - 9149476 GAAGATGAAACTGATCTTTCTGGTGTT-GA-GGGAG-GGAGGAAGATCGTGTATGGCTCCCTTGACCACTGAGGTTGGGAGCAATTGGAGCCAGAAAGGCT i micMur3.chr32 I 724 C 0 s otoGar3.GL873534 11034471 98 + 30473821 -GAGACAAAACTGACCTTTCTGGTGTT-AG-GGGAATGGAGGAAGGTGGGGTGTGGCTTTCGTGGCCATTGAGGTTGGCAGCAGTTGGAGCCAGAAAGACT i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16580160 93 + 58134056 -AAGGTGAAAGTGAGATTTCTGGTGTT-GGCAGAT--GAAGGAAAATGGTGGATGGCTCTCTTAGCCCCTGAGATTCAAAACAATTGGAGTCAGAAA---- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1764889 96 - 2187301 GGAGATAAAAC--AGGTTTCTGGGGTCAGG-AGAG--GGAGGAATATGGTGTATGGCTGTTTTGAACATAAAGACTGGAAGCAGTTAGAGACAGAAATGTG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 697 2692 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I a score=29291.000000 s hg38.chrUn_KI270749v1 90089 3 + 158759 AAT s panTro5.chr3 201977328 3 - 202621043 AAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745329 3 - 205426864 AAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561826 3 + 86207423 AAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044897 3 + 204787373 AAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976742 3 - 192460366 AAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088700 3 - 17224310 AAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400934 3 - 41321030 AAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474589 3 - 101219884 AAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856881 3 - 924385 AAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700335 3 - 10587913 AAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46020172 3 - 98464013 AAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702688 3 + 27742158 AAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240246 3 - 4835464 AAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3698855 3 + 4093027 AAC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1598190 3 - 9149476 AAT i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 3389 3 + 631505 AAT i eulMac1.LGHX01000499v1 I 2692 I 121 s otoGar3.GL873534 11034570 2 + 30473821 AG- i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16580253 1 + 58134056 --T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1764985 3 - 2187301 CAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I a score=423195.000000 s hg38.chrUn_KI270749v1 90092 36 + 158759 GGAAGAGAAATTAGAACTTTCAAACCAAAATTTAAC s panTro5.chr3 201977331 36 - 202621043 GGAAGAGAAATTAGAACTTTCAGACCAAAATTTAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745332 36 - 205426864 GGAAGAGAAATTAGAACTTTCAAACCAAAATTTAAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561829 36 + 86207423 GGAAGAGAaattagaactttcaaatcaaaatttaac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044900 36 + 204787373 GGAAGAGAAATTAGAACTTTCAAATCAAACCTTAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976745 36 - 192460366 GGAAGAGAAATTAGAACTTTCAAATCAAACCTTAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088703 36 - 17224310 GGAAGAGAAATTAGAACTTTCAAATCAAACCTTAAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400937 36 - 41321030 GGAAGAGAAATTAGAACTTTCAAATCAAACCTTAAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474592 36 - 101219884 GGAAGAGAAATTAGAACTTTCAAATCAAACCTTAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856884 36 - 924385 GGAAGAGAAATTAGAACTTTCAAATCAAACCTTAAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700338 36 - 10587913 GGAAGAGAAATTAGAACTTCCAAATCAAACTTTAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46020175 36 - 98464013 GGAAGATAAATTAGAACTTTAAAATCAAAATTTAAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702691 36 + 27742158 GGAAGAGAAATTAAAACTTTCAAATCAAAATTTAAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240249 36 - 4835464 GGAAGAGAAATTAGAACTTTCAAATCAAAATTTAAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3698858 36 + 4093027 GGAAGAGAAATTAGAACTTTCAAATCAAAATTTAAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1598193 36 - 9149476 GGGAGAGGAATTAGAACTTCCAAATCAACATTTAAC i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11034572 36 + 30473821 GGGAGAGAAATGAGAACTGTCATATCCACATACAAC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16580254 36 + 58134056 GGAAGAGAAATTAGAATTTGCAAGTCATTCTTATGC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1764988 33 - 2187301 GGGACAGAA---AGAATTTGCAAATCAACATTTAGC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 3392 121 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730121 681 - 149736546 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I a score=420062.000000 s hg38.chrUn_KI270749v1 90128 37 + 158759 TAT-AAAATGTGACTATGTCTCTGGGAGAGGAGACATG s panTro5.chr3 201977367 37 - 202621043 TAT-AAAATGTGACTGTGTCTTTGGGAGAGGAGACATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745368 37 - 205426864 TAT-AAAATGTGACTATGTCTTTGGGAGAGGAGACATG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561865 36 + 86207423 tat-aaaatgtgactctgtctctgggacagg-gacatg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044936 37 + 204787373 TAT-AAAATGTGACTATGTCTCTGGGAGAGGAAACATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976781 37 - 192460366 TAT-AAAATGTGACTATGTCTCTGGGAGAGGAAACATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088739 37 - 17224310 TAT-AAAATGTGACTATGTCTCTGGGAGAGGAAACATG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17400973 37 - 41321030 TAT-AAAATGTGACTACGTCTCTGGGAGAGGAAACATG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474628 37 - 101219884 TAT-AAAATGTGACTACGTCTCTGGGAGAGGAAACATG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856920 37 - 924385 TAT-AAAATGTGACTACGTCTCTGGGAGAGGAAACATG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700374 37 - 10587913 TAT-AAAATGTGACTATGTCTCTGGGAGAGGAGACATG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46020211 37 - 98464013 TAT-AAAATGCAACTATGTCTCTGGGAGAGGAGACATG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702727 37 + 27742158 TAT-AAAATGCAACTATGTCTCTAGGAGAGGAGACATG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240285 37 - 4835464 TAT-AAAATGCGACTATGTCTCTGGGAGAGGAGACATG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3698894 36 + 4093027 -AT-AAAATGCGACTATGTCTCTGGGAGAGGAGACATG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1598229 38 - 9149476 CACAAAAATGTGACTCTGTCTAAAGGAGAGAAGACATG i micMur3.chr32 C 0 I 78 s otoGar3.GL873534 11034608 30 + 30473821 C---AAGATG-----CTGTCTACAGGAGTGAAGATGTG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45730802 37 - 149736546 tgt-aaaatataaataaaTCCTTTAAAAAGAAGAAAGA i mm10.chr6 I 681 C 0 s canFam3.chr20 16580290 37 + 58134056 CAT-AAAATGTGACTTTGTCTACGAGAGGGGAGACATG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1765021 32 - 2187301 TAT-TAAAAGTAC-----TCTAAGGGAGAGGAGATGTA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 3392 121 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I a score=513869.000000 s hg38.chrUn_KI270749v1 90165 65 + 158759 TATTTCAGAGACATCA--------------------------------TGTCTGCATTCTATATTCCACGTTCTTCCT-CAAACATAAAT----ATAGAGAA s panTro5.chr3 201977404 65 - 202621043 TATTTCAGAGACATCA--------------------------------TGTCTGCATTCTATATTCCACGTTCTTCCC-CAAACATAAAT----ATAGAGAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745405 65 - 205426864 TATTTCAGAGACATCA--------------------------------TGTCTGCATTCTATATTCCACGTTCTTCCC-CAAACATAAAT----ATAGAGAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561901 65 + 86207423 tattccagagacatca--------------------------------tgtctgcattctatatTCCACGTTCTTCCC-CAAACATAAAT----ACAGAGAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66044973 97 + 204787373 TATTTCAGAGACATAATGTCTACATTCTATATTATTTCAGAGACATCCTGTCTGCATTCTATATTCCATGTTTTTCTC-AAAACATAAAT----ATAGAGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976818 97 - 192460366 TATTTCAGAGACATAATGTCTACATTCTATATTATTTCAGAGACATCCTGTCTGCATTCTATATTCCATGTTTTTCTC-AAAACATAAAT----ATAGAGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088776 97 - 17224310 TATTTCAGAGACATAATGTCTACATTCTATATTATTTCAGAGACATCCTGTCTGCATTCTATATTCCATGTTTTTCTC-AAAACATAAAT----ATAGAGAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17401010 97 - 41321030 TATTTCAGAGACATAATGTCTACATTCTATATTATTTCAGAGACATCCTGTCTGCATTCTATATTCCATGTTTTTCTC-AAAACATAAAT----ATAGAGAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474665 97 - 101219884 TATTTCAGAGACATAATGTCTACATTCTATATTATTTCAGAGACATCCTGTCTGCATTCTATATTCCATGTTTTTCTC-AAAACATAAAT----ATAGAGAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 856957 97 - 924385 TATTTCAGAGACATAATGTCTACATTCTATATTATTTCAGAGACATCCTGTCTGCATTCTATATTCCATGTTTTTCTC-AAAACATAAAT----ATAGAGAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700411 97 - 10587913 TATTTCAGAGACATAATGTCTACATTCTATATTATTTCAGAGACATTCTGTCTGCATTCTATATTCCATGTTTTTCTC-AAAACATAAAT----ATAGAGAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46020248 60 - 98464013 TCTTTCAGAGACA-----------------------------------TGTCTACATTCTATATTCCATGTT--CCCC-CCAACAGAAAT----ATAGAGAA i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27702764 61 + 27742158 TATTTCAGAGACA-----------------------------------TGTCTACATTCTGTATTTCATGTTC-CCCC-CCAACAGAAAT----ATAGAGAA i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 240322 66 - 4835464 TATTTCAGAGACA-----------------------------------TGTCTACATTCTATATTCCATGTTC-CCCCACCAACAGAAATACCAACAGAGAA i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3698930 61 + 4093027 TATTTCAGAGACA-----------------------------------TGTCTACATTCTATATTCCATGTTC-CCCC-CCAACAGAAAT----ATACAGAA i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11034638 55 + 30473821 TATCTCTAAGAGA-----------------------------------TTTTAACATTCTACA-------TCTTCCTT-TAAACAGAAAA----ATAGAGAA i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45730839 44 - 149736546 ----------------------------------------------------TATATTTTGATTTCTACATTG-TAGC-CAATCAGATAC----AGAAAAGA i mm10.chr6 C 0 I 1 s canFam3.chr20 16580327 58 + 58134056 TATTTCTGAGAGG---------------------------------------TCCTTTATACACTCCACATTCTTCCC-CAAACAGACAT----GTAGAGAA i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1765053 58 - 2187301 TATATCTGAG--------------------------------------TGATTGC-TTGTACGTTCCACATTCTTAAC-CAAACAGGAAT----GTGTGGAA i dasNov3.JH563077 C 0 I 1 e eulFla1.LGHW01000501v1 744 2905 + 635616 I e eulMac1.LGHX01000499v1 3392 121 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e micMur3.chr32 1598267 78 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I a score=294691.000000 s hg38.chrUn_KI270749v1 90230 23 + 158759 AAAAATG-AAAGATGTA-AA---AAATC s panTro5.chr3 201977469 23 - 202621043 AAAAATG-AAAGATGTG-AA---AAATC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745470 23 - 205426864 AAAAATG-AAAGATGTG-AA---AAATC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561966 23 + 86207423 AAAAATG-AAAGATGTG-AA---AAATC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045070 23 + 204787373 AAAAATG-AAAGATGTG-AA---AAATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976915 23 - 192460366 AAAAATG-AAAGATGTG-AA---AAATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088873 23 - 17224310 AAAAATG-AAAGATGTG-AA---AAATC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17401107 23 - 41321030 AAAAATG-AAAGATGTG-AA---AAATC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474762 23 - 101219884 AAAAATG-AAAGATGTG-AA---AAATC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857054 23 - 924385 AAAAATG-AAAGATGTG-AA---AAATC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700508 21 - 10587913 AAACATG-AAAG--GTG-AA---AAATC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46020309 25 - 98464013 AAAAATGAAAAAATGTGAAA---AAATC i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27702826 23 + 27742158 AAAAATG-AAAAATGTG-AA---AAATC i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 240389 23 - 4835464 AAAAATG-AAAAATGTG-AA---GAATC i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3698992 23 + 4093027 AAAAATG-AAAAATGTG-AA---AAATC i aotNan1.NW_018502033v1 I 1 C 0 s eulMac1.LGHX01000499v1 3513 23 + 631505 AAAAATG-AGAGATGTA-AA---AAAAT i eulMac1.LGHX01000499v1 I 121 I 489 s eulFla1.LGHW01000501v1 3649 23 + 635616 AAAAATG-AGAGATGTA-AA---AAAAT i eulFla1.LGHW01000501v1 I 2905 I 489 s otoGar3.GL873534 11034694 26 + 30473821 AAACATG-AGAGACGTA-AAAATAAAAT i otoGar3.GL873534 I 1 I 1 s mm10.chr6 45730884 20 - 149736546 AAAAAAA-TAAGATGTG-GA---AA--- i mm10.chr6 I 1 C 0 s canFam3.chr20 16580386 23 + 58134056 AAAAATG-AGACATGTG-GA---AAAAT i canFam3.chr20 I 1 I 1 s dasNov3.JH563077 1765112 23 - 2187301 AAAAACT-GGAGACATA-GA---AAATC i dasNov3.JH563077 I 1 C 0 e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e micMur3.chr32 1598267 78 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I a score=13923.000000 s hg38.chrUn_KI270749v1 90253 1 + 158759 A s panTro5.chr3 201977492 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745493 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561989 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045093 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976938 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088896 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17401130 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474785 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857077 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700529 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46020334 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702849 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240412 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699015 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11034721 1 + 30473821 A i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16580410 1 + 58134056 A i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1765135 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 3672 489 + 635616 I e eulMac1.LGHX01000499v1 3536 489 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e mm10.chr6 45730904 0 - 149736546 C e micMur3.chr32 1598267 78 - 9149476 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I a score=3146462.000000 s hg38.chrUn_KI270749v1 90254 228 + 158759 CATACAGAGATAATAAATGTGCATTTTAAAACACAGTGAATTGATGCTTGAAGGATTATGATAACTAAAAATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACTATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-TTT--TTGACTTCTTTAAGATTCTGGAAAACATAAAACACGGTTATGAGTAATT---------------------ATG-T-TT-TTCAATTTGCTT s panTro5.chr3 201977493 228 - 202621043 CATACAGAGATAATAAATGTGCATTTTAAAACACAGTGAATTGATGCTTGAAGGATTATGATAACTAAAAATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACTATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-TTT--TTGACTTCTTTAAGATTCTGGAAAACATAAAACACGGTTATGAGTAATT---------------------ATG-T-TT-TTCAATTTGCTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745494 228 - 205426864 CATACAGAGATAATAAATGTGCATTTTAAAACACAGTGAATTGATGCTTGAAGGATTATGATAACTAAAAATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACTATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-TTT--TTGACTTCTTTAAGATTCTGGAAAACATAAAACACGGTTATGAGTAACT---------------------ATG-T-TT-TTCAATTTGCTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67561990 228 + 86207423 CATACAGAAATAACAAATGTGCATTTTAAAACATAGTGAATTGATGCTTGAAGGATTATGATAACTAAAAATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACTATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-TGT--TTAACTTCTTTAAGATTTTGGAAAACATAAACCACAGTTATGAGTAATT---------------------ATG-T-TT-TTCAATTTGCTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045094 228 + 204787373 CATACAGAGATAATAAATGTGCATTTTAAAACATAGTGAATTGATCCTTGAAGGATTGTGATAACTAAACATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACTATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-TTT--TTGACTACTTTAAGATTCTGGAAAACATAAAACACTGTTATGAGTAATT---------------------ATG-T-TT-TTCAATTTGCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60976939 228 - 192460366 CATACAGAGATAATAAATGTGCATTTTAAAACATAGTGAATTGATCCTTGAAGGATTGTGATAACTAAACATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACTATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-TTT--TTGACTACTTTAAGATTCTGGAAAACATAAAACACTGTTATGAGTAATT---------------------ATG-T-TT-TTCAATTTGCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11088897 228 - 17224310 CATACAGAGATAATAAATGTGCATTTTAAAACATAGTGAATTGATCCTTGAAGGATTGTGATAACTAAACATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACTATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-TTT--TTGACTACTTTAAGATTCTGGAAAACATAAAACACGGTTATGAGTAATT---------------------ATG-T-TT-TTCAATTTGCTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17401131 228 - 41321030 CATACAGAGATAATAAATGTGCATTTTAAAACATAGTGAATTGATCCTTGAAGGATTGTGATAACTAAACATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACTATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-TTT--TTGACTACTTTAAGATTCTGGAAAACATAAAACATGGTTATGAGTAATT---------------------ATG-T-TT-TTCAATTTGCTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64474786 228 - 101219884 CATACAGAGATAATAAATGTGCATTTTAAAACATAGTGAATTGATCCTTGAAGGATTGTGATAACTAAACATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACTATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-TTT--TTGACTACTTTAAGATTCTGGAAAACATAAGACACGGTTATGAGTAATT---------------------ATG-T-TT-TTCAATTTGCTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857078 228 - 924385 CATACAGAGACAATAAATGTGCATTTTAAAACATAGTGAATTGATCCTTGAAGGATTGTGATAACTAAACATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACTATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-TTT--TTGACTACTTTAAGATTCTGGAAAACATAAAACACGGTTATGAGTAATT---------------------ATG-T-TT-TTCAATTTGCTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700530 228 - 10587913 CATACAGAGATAATAAATGTGCATTTTAAAACATAGTGAATTGATCCTTGAAGGATTGTGATAACTAAAAATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACTATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-TTT--TTGACTACTTTAAGATTCTGGAAAACATAAAACACAGTTATGAGTAATT---------------------ATG-T-TT-TTCAATTTGCTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46020335 229 - 98464013 CATACAGCTATAGTAAATGTGCATTTTAAAACATCGTGAATTGATGCTTGAAGGATTATGATGACTAAAAATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTCAGTATACCATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-CTT--TGGATTACTTTAAAAGTCTGGAAAACATAAAACACAGCTCAAAGTAATT---------------------ATG-TATC-TTCAATTTGCTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27702850 229 + 27742158 CATACAGCTATAGTAAATGTGCATTTTAAAATGTAGTGAATTGATGCTTGAAGGATTATGATGACTAAAAATGATTTATAAAGAAATTCAGAAATCTTATTTACTTTTCAATATACCATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-CTT--TGGATTACTTTAAAATTCTAGAAAACATAAAACACAGCTAAAAGTAATT---------------------ATG-TGTC-TTCAATTTGCTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240413 229 - 4835464 CATACAGCTATGGTAAATGTGCATGTTAAAACATAGTGAATTGATGCTTGAAGGATTATGATGACTAAAAATGATTTATAAAGAAATTCAAAAATCCTATTTACTTTTCAATACACCATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-CTT--TGGATTACTTTAAAATTCTGGAAAACATAAAACACGGCTAAAAGTAATT---------------------ATG-TATC-TTCAATTTGCTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699016 229 + 4093027 CATACTGCTATAGTGAATGCGCATTTTAAAACATAGTGAATTGATGCTTGAAGGATTATGATGACTAAAAATGATTTATAAAGAAATTCAAAAATCGTATTTACTTTTCAATATACCATTAATAATGCAATA-TTT-CTCCATGCTTGATTTCACTGATA-CTT--TGGATTACTTTAAAATTCTGGAAAACATAAAACACAGCTAAAAGTAATT---------------------ATG-TATC-TTCAATTTACTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1598345 231 - 9149476 CATACAGAAATAATAAATGTGCATTTTAAAATATAGTGAATTGACGCTTGAAGGATAATGTTGACTAAAAATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTAAATACACTATTAATAATGTGATATTTT-CTTCATGCTTGATTTTACTGATATTTT--TTGACTACTTTAAAATTCCAAGAAATATAAAACACAGTCATGAGTAATT---------------------ATG-A-TTCTTTAATTTGCTT i micMur3.chr32 I 78 C 0 s otoGar3.GL873534 11034722 230 + 30473821 CATACAGAAATAATAAATGTGCATTTTAAAATATAGTGAATTGATGCTTGAAGGATTATGTTGACTAAAAATGATTTATAAAGAAATTCAAAAATCTTATTTACTTTTAGATATACTATTAATAATGCAATGTTTT-CTCCATGCTTGATTTTAGTGATATTTT--TTGACTACTTCAAAATTTGGGGAAATATAAAACACAGTTATGAGTAATT---------------------ATG-A-AT-TTTATTTTGTTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45730904 235 - 149736546 --TGAAGAGAAAATGAGTGTAAATTTTAAAGTATAGCAAATACATGCTTGTAGGATTATGTTGACTAGAAATGGTTTATGTAGACTTTTAGAAAT----TTTAATTTCCAATATGGCACCattaataaaata-tttaattcatattt-attttaCTTATG-CTT--TTAA-----TGAAAATTTCAGTAACAGTAAGACATAGTTATGCATAACTTAAAAATAACCTTAATTAAGGTTA-T-TT-TTCA---TGCTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16580411 227 + 58134056 --CACAGAGATAATGAATGTGCATTTTAAAATACAGTGAATTGATGCTTGAAAGATTATGTTGACTAAAAATGATTTATAAAGACATTCA-AGATCTTATTTACTTTTAAATATACTATTAATAATGCAATATTTT-CTCCATGCTTGATTTCACTGATATTTT--TTGACTATTTTAAAATTC-GAGGAACACAAAACACAGTTATGGGTAATT---------------------ATGAT-TC-TTCAATTTGCTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1765136 230 - 2187301 CATAGAAAGATAATGAATGTGCATTTTAAAATACAGTGAACTGATGCTTGAAGGATTATGTTGACTAAAAGTGATTGATAAAGACATTCA-AAATCTTATTTACTTTTAAATATACTATTAATAATGCAATATTTT-CTCCATGCTTGATTTCACTGATA-TTTTCTTGACTAC-TTAAAATTCTAAGAAACATAAAGCACAGTTATGGGTAATT---------------------ATGAT-TC-TTCAATTTGCTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 3672 489 + 635616 I e eulMac1.LGHX01000499v1 3536 489 + 631505 I e proCoq1.NW_012148064v1 569269 1383 + 2414909 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I a score=2220924.000000 s hg38.chrUn_KI270749v1 90482 158 + 158759 ATCTGTACACACAAATA------ATGGTTCTTTCAAGGATCTATAAACAATCTAGTCTCAAGTACAAATGGGTTTAAATGTAACATGT-TAATTTGCTAAAATTCTACA---TTTCCCAAGAAAATAACAGTTTTAGCATTTTTACCAAGTGGC-----TTTTTT---A-TTTTTT-T s panTro5.chr3 201977721 159 - 202621043 ATCTGTACACACAAATA------ATGGTTCTTTCAAGCATCTATAAACAATCCAGTCTCAAGTACAAATGGATTTAAATGTAACATGT-TAATTTGCTAAAATTCTACAACATTTCCCAAGAAAATAA--GTTTTAGCATTTTTACCAAGTGGC-----TTTTTT---A-TTTTTT-T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745722 159 - 205426864 ATCTGTACACACAAATA------ATGGTTCTTTCAAGCATCTATAAACAATCCAGTCTCAAGTACAAATGGATTTAAATGTAACATGT-TAATTTGCTAAAATTCTACAACATTTCCCAAGAAAATAA--GTTTTAGCATTTTTACCAAGTGGC-----TTTTTT---A-TTTTTT-T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562218 161 + 86207423 ATCTGTACACACAAATA------ATGATTCTTTCAAGCATCTATAAACAATCCAGTCTCAAGTACAAATGGGTTTAAATGTAACATGT-TAATTTGCTAAAATCCTACAACATTTCCCAAGAAAATAACAGTTTTAGCATTTCTACTAGGTGGC-----TTTTTT---A-TTTTTT-T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045322 166 + 204787373 ATCTGTACACACAAATAAAAAATATGGTTCTTTCAAGCATCTATAAACAATCCAGTCTCAAGTACAAATGGGCTTCAATGTAACATGT-TAATTTGCTAAAATTCTACAACATTTCCCAAGAAAATAACAGTTTTAGCATTTTTACTAGGTGGC-----TTTTTT---A-TTTTTT-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977167 166 - 192460366 ATCTGTACACACAAATAAAAAATATGGTTCTTTCAAGCATCTATAAACAATCCAGTCTCAAGTACAAATGGGCTTCAATGTAACATGT-TAATTTGCTAAAATTCTACAACATTTCCCAAGAAAATAACAGTTTTAGCATTTTTACTAGGTGGC-----TTTTTT---A-TTTTTT-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089125 166 - 17224310 ATCTGTACACACAAATAAAAAATATGGTTCTTTCAAGCATCTATAAACAATCCAGTCTCAAGTACAAATGGGCTTCAATGTAACATGT-TAATTTGCTAAAATTCTACAACATTTCCCAAGAAAATAACAGTTTTAGCATTTTTACTAGGTGGC-----TTTTTT---A-TTTTTT-- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17401359 166 - 41321030 ATCTGTACACACAAATAAAAAATATGGTTCTTTCAAGCATCTATAAACAATCCAGTCTCAAGTACAAATGGGCTTCAATGTAACATGT-TAATTTGCTAAAATTCTACAACATTTCCCAAGAAAATAACAGTTTTAGCATTTTTACTAGGTGGC-----TTTTTA---A-TTTTTT-- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475014 166 - 101219884 ATCTGTACACACAAAT-AAAAATATGGTTCTTTCAAGCATCTATAAACAATCCAGTCTCAAGTACAAATGGGCTTCAATGTAACATGT-TAATTTGCTAAAATTCTACAACATTTCCCAAGAAAATAACAGTTTTAGCATTTTTACTAGGTGGC-----TTTTTT---ATTTTTTT-- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857306 166 - 924385 ATCTGTACACACAAATAAAAAATATGGTTCTTTCAAGCATCTATAAACAATCCAGTCTCAAGTACAAATGGGCTTCAATGTAACATGT-TAATTTGCTAAAATTCTACAACATTTCCCAAGAAAATAACAGTTTTAGCATTTTTACTAGGTGGC-----TTTTTT---A-TTTTTT-- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6700758 167 - 10587913 ATCTGTACACACAAATAAAAAATATGGTTCTTTCAAGCATCTATAAACAATCCAGTCTCAAGTACAAATGGGCTTCAATGTAACATGT-TAATCTGCTAAAATTCTACAACATTTCCCAAGGAAATAACAGTTTTAGCATTTTTACTAGGTGGT-----TTTTTT---A-TTTTTTT- i colAng1.NW_012114711v1 C 0 I 169 s calJac3.chr15 46020564 161 - 98464013 ATCTCTACACACAAATA------ATGGTTCTTTCAAGCACCTAAAAACAATCCAGTCTCAAGTACAAATGAGTTTAAATATAACATGT-TAATTTGCTAAAATTCTACAACATTTCTCAAGAAAATAACAG-TTTAGCATTTTTACTAGGTTGC-----TTTTTTAA-C-TTTTTT-- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703079 161 + 27742158 ATCTCTACACACAAATA------ATGGTTCTTTCAAGCACCTAAAAACAATTCAGTCTCAAGTACAAATGAGTTTAAATATAACATGT-TAATTTGGTAAAATTCTACAACATTTCTCAAGAAAATAACAG-TTTAGCATTTTTACTAGGTTGC-----TTTTTTTA-T-TTTTTT-- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240642 160 - 4835464 ATCTCTACACACAAATA------ATGGCTCTTTCAAGCACCTAAAAACAATCC-GTCTCAAGTACAAATGAGTTTAAATATAACATGT-TAATTTGCTAAAATTCTACAACATTTCTCAAGAAAATAACAG-TTTAACATTTTTACTATGTTGC-----CTTTTTTA-T-TTTTTT-- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699245 161 + 4093027 ATCTCTACACACTAATA------ATGGTTCTTTCAAGCACCTAAAAACAATGCAGTCTCAAGTATAAATGAGTTTAAATATAACATGT-TAATTTGCTAAAATTCTACAACATTTCTCAAGAAAATAACAG-TTTAGCATTTTT-CTAGGTTGC-----TTTTTTTATT-TTTTTT-- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1598576 160 - 9149476 ATCTCTACACACAAATA------ATGGTTCTTTCAAGCATCTATAAACAATTCAGTCTCAAGCACAAATGGGTTTAAATGTAACATATTTAATTTTCTAAAATTCTACAATATTTCCCAAGAAAGTAACAGTTTTAGCATTTTTACTAGGTGGC------TTTTT---T-TCCTCC-- i micMur3.chr32 C 0 I 2 s proCoq1.NW_012148064v1 570652 160 + 2414909 ATCTCTACACACAAATA------ATGGTTCTTTCAAGCATCTATAAACAATTCAGTCTCAAGTACAAATGGGTTTAAATGTAACATGTTTAATTTTCTAAAATTCTACAATA-TTCCCAAGAAAGTAACAGTTTTAGCATTTTTACGAGGTGGC-----TTTTTT---T-TTTTTC-- i proCoq1.NW_012148064v1 I 1383 I 2 s otoGar3.GL873534 11034952 166 + 30473821 ATCTCTACACACAAATA------ATGCCTCTTTCAAGCATCTACAAACAATTCAGCCTTAAGTAAAAATGGATTTAAATGCAACATGTATAATTTTCTAAAATTCTACCAGATTTCCCGAGAAAATAGCAGTTTTAGCATTTTTACTGGGTGGGTTGTGTTTTTT---T-TTTTTC-- i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45731139 149 - 149736546 ATCTCTATACATGAAAG------ATGGCTCCTTTAAGTCATCATTAGCAGGCCACTCTGGAGTCTGAACAGGCTTAAATATACTGTGTTTAAATTGCTAAGATTCTGCA---TTCCTCAAGAAAGCAAAAGTTCTAGCATTTGTA----GTAGT-----TTTTTT---C-C------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16580638 161 + 58134056 ATCTCAACACACAAATG------ATAGTCCTTTCAAGCATCTATAAACAATTCAGTCTCAACTATGAATGGGTTTAAATGTAATATATTTAATTTGCTAAAATTTTACAACATTTCCCAAGAAAATAACAGTTTTAGCATTTTTACTAGACAAG-----TTTTCT---C-CCCTGT-- i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1765366 154 - 2187301 ATCTCTACACACAAATG------ATGGTTCTTTCAAGCATCTATAAACAATCCTGATGCAAGTACAAATGGCTTCAAATGGAATGT-T-TAATTTGCTAAAATTCTACA--TTTCCAAAAGAAAATAACAGTTTTAGCATTTTTACTAGGTGCC-----TTTTTT---T-TTC----- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 3672 489 + 635616 I e eulMac1.LGHX01000499v1 3536 489 + 631505 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I a score=5907.000000 s hg38.chrUn_KI270749v1 90640 1 + 158759 C s panTro5.chr3 201977880 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745881 1 - 205426864 C i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562379 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045488 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977333 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089291 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17401525 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475180 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857472 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46020725 1 - 98464013 C i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703240 1 + 27742158 C i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240802 1 - 4835464 C i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699406 1 + 4093027 C i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1598738 1 - 9149476 C i micMur3.chr32 I 2 C 0 s proCoq1.NW_012148064v1 570814 1 + 2414909 C i proCoq1.NW_012148064v1 I 2 C 0 s otoGar3.GL873534 11035120 1 + 30473821 C i otoGar3.GL873534 I 2 C 0 s mm10.chr6 45731288 1 - 149736546 C i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1765520 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 3672 489 + 635616 I e eulMac1.LGHX01000499v1 3536 489 + 631505 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I e canFam3.chr20 16580799 1 + 58134056 I e colAng1.NW_012114711v1 6700925 169 - 10587913 I a score=1741053.000000 s hg38.chrUn_KI270749v1 90641 95 + 158759 ACTGCACTTAAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA s panTro5.chr3 201977881 95 - 202621043 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745882 95 - 205426864 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562380 95 + 86207423 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045489 95 + 204787373 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977334 95 - 192460366 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089292 95 - 17224310 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17401526 95 - 41321030 ACTGCACTTTAGAAGTCAGCCCTGCGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475181 95 - 101219884 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857473 95 - 924385 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701094 95 - 10587913 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTTGCTGATTTGACCCAA i colAng1.NW_012114711v1 I 169 C 0 s calJac3.chr15 46020726 95 - 98464013 ATTGCACTTTAGAAGTCAGCCCTGTGCAGTTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGTTGATTTGACCCAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703241 95 + 27742158 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTCTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGTTGATTTGACCCAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240803 93 - 4835464 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACT--AGAGAGTACATGTGGTTGATTTGACCCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699407 95 + 4093027 ACTGCACTTTAGAAGTCAGCCCTATGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGTTGATTTGACCCAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1598739 95 - 9149476 ATTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 570815 95 + 2414909 ACTGCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11035121 95 + 30473821 TTTGCACTTTAGAAGTCAGCTCTGTGCAGTTTAATCTTTAAAAGAACACT-TCTGCTGATAAACTACAGAGAATACATGTGGCCAATTTGACCCAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731289 96 - 149736546 ATTGCACTTTAGAAGTTAGTCCTATGCAGTTTAATCTTTTAGAGAATCCTGTTTGCTGATTAACTACAGAGAATGCATGTTGCTGATTTGACCCAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16580800 92 + 58134056 ---GCACTTTAGAAGTCAGCCCTGTGCAATTTAATCTTTCAAAGAATCCT-TCTACTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCCAA i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1765521 95 - 2187301 ATTGCACTTTTGAAGTCAACCCTGTGCAATTTAATCTTTCAAAGAATCAT-TCTGCTGATAAACTACAGAGAGTACATGTGGCTGATTTGACCAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 3672 489 + 635616 I e eulMac1.LGHX01000499v1 3536 489 + 631505 I e rhiRox1.KN296641v1 1356894 1574 - 1467263 I e papAnu3.chr2 59536207 903 + 187378091 I e nasLar1.chr2 57704143 4297 + 181502896 I e ponAbe2.chr3 69629547 5297 + 202140232 I e rhiBie1.NW_016820128v1 1210653 2317 - 2311269 I e tarSyr2.KE939134v1 133481 891 + 958716 I a score=36946.000000 s hg38.chrUn_KI270749v1 90736 1 + 158759 A s panTro5.chr3 201977976 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745977 1 - 205426864 A i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69634844 1 + 202140232 A i ponAbe2.chr3 I 5297 I 387 s nomLeu3.chr21 67562475 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045584 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977429 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089387 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17401621 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59537110 1 + 187378091 A i papAnu3.chr2 I 903 I 386 s chlSab2.chr22 64475276 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857568 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57708440 1 + 181502896 A i nasLar1.chr2 I 4297 I 377 s colAng1.NW_012114711v1 6701189 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1358468 1 - 1467263 A i rhiRox1.KN296641v1 I 1574 I 371 s rhiBie1.NW_016820128v1 1212970 1 - 2311269 A i rhiBie1.NW_016820128v1 I 2317 I 371 s calJac3.chr15 46020821 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703336 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240896 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699502 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 134372 1 + 958716 A i tarSyr2.KE939134v1 I 891 I 388 s micMur3.chr32 1598834 1 - 9149476 A i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 570910 1 + 2414909 A i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 4025 1 + 631505 A i eulMac1.LGHX01000499v1 I 489 I 1956 s eulFla1.LGHW01000501v1 4161 1 + 635616 A i eulFla1.LGHW01000501v1 I 489 I 1956 s otoGar3.GL873534 11035216 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731385 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16580892 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1765616 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 a score=5836891.000000 s hg38.chrUn_KI270749v1 90737 371 + 158759 TCTTTCAGTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGATTTTTCCTGAAGGATAAAAATAATAATGGTGTTTGACTCAC-TTTTATACCTGGGAGCAGAAGATGTCCTTGCCAAATATCTTTTTGGAAGAGCTCTAG-TTGGACAGACACTTCCAAAAGATAAGCAAAGCATG-AAAGATATGAAC---ATCGGACAAAACGAAAGGAAATGAAAGCATTTCCTAAAGCATTTAAAATGATGACAT----AAAAAAGTTTG--TTTA-----TATTTATCAAACATAAGTT---GGGTGACTTTTTAAAAATGGAAAGATGAACTTCAGGATATTTATTACCAAGCTGGTCCAGACAGCT------------TG s panTro5.chr3 201977977 371 - 202621043 CCTTTCAGTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTGAAGGATAAAAATAATAATGGTGTTTGACTCAC-TTTTATACCTGGGAGCAGAAGATGTCCTTGCCAAATATCTTTTTGGAAGAGCTCTAG-TTGGACAGACACTTCCAAAAGATAAGCAAAGCATG-AAAGATATGAAC---ATCGGACAAAACGAAAGGAAATGAAAGCATTTCCTAAAGCATTTAAAATGATGACAT----AAAAAAGTTTG--TTTA-----TACTTATCAAACATAAGTT---GGGTGACTTTTTAAAAATGGAAAGATGAACTTCAGAATATTTATTACCAAGCTGGTCCAGACAGCT------------TG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204745978 371 - 205426864 CCTTTCAGTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATTAGGATTTTCACAGAAGGTTTTTCCTGAAGGATAAAAATAATAATGGTGTTTGACTCAC-TTTTATACCTGGGAGCAGAAGATGCCCTTGCCAAATATCTTTTTGGAAGAGCTCTAG-TTGGACAGACACTTCCAAAAGATAAGCAAAGCATG-AAAGATATGAAC---ATCGGACAAAACGAAAGGAAATGAAAGCATTTCCTAAAGCATTTAAAATGATGACGT----AAAAAAGTTTG--TTTA-----TATTTATCAAACATAAGTT---GGGTGACTTCTTAAAAATGGAAAGATGAACTTCAGGATATTTATTACCAAGCTGGTCCAGACAGCT------------TG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562476 371 + 86207423 CCTTTCAGTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTGAAGGGTAAAAATAATAATGGTGTTTGACTCAC-TTATATACCTGGGAGCAGAAGATGTCCTTGCCAAATATCTTTTTGGCAGAGCTCTAG-TTGGACAGACACTTCCAAAAGATAAGCAAAGCATG-AAAGATATGAAC---ATCGGACAAAACGAAAGCAAATGAAAGCATTTCCTAAAGAATTTAAAATGATGACCT----AAAAAAGTTTG--TTTG-----TATTTATCAAACATAAGTT---AGGTGACTTTTTAAAAATGGAAAGATGAACTTCAGGATATTTATTACCAAGCTGGTCCAGACAGCT------------TG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045585 371 + 204787373 CCTTTCAGTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTGAAGGGTAAAAATAATAATGGTGTTTGACTCAC-TTTCATACCTGGGAGCCGAAGATGTCCTTGCCAAATATCTTCTTGGCAGAGCTCTAG-TTGGACAGACACTTCCAAGAGATAAGCAAAGCATG-AAAGATAGGAAC---ATCGGACAAAATGAAAGGAAATGAAAGCATTTCCTAAAGCATTTAAAATGATGACAT----AAAAAAGTTTG--TTTA-----TATTTATCAAGCATGAGTT---AGGTGACTTTTTAAAAATGTAAAGATGAACTTCAGGATATTTATTACCAAGCTGGTCCAGACAGTT------------TG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977430 371 - 192460366 CCTTTCAGTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTGAAGGGTAAAAATAATAATGGTGTTTGACTCAC-TTTCATACCTGGGAGCCGAAGATGTCCTTGCCAAATATCTTCTTGGCAGAGCTCTAG-TTGGACAGACACTTCCAAGAGATAAGCAAAGCATG-AAAGATAGGAAC---ATCGGACAAAATGAAAGGAAATGAAAGCATTTCCTAAAGCATTTAAAATGATGACAT----AAAAAAGTTTG--TTTA-----TATTTATCAAGCATGAGTT---AGGTGACTTTTTAAAAATGTAAAGATGAACTTCAGGATATTTATTACCAAGCTGGTCCAGACAGTT------------TG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089388 371 - 17224310 CCTTTCAGTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTGAAGGGTAAAAATAATAATGGTGTTTGACTCAC-TTTCATACCTGGGAGCCGAAGATGTCCTTGCCAAATATCTTCTTGGCAGAGCTCTAG-TTGGACAGACACTTCCAAGAGATAAGCAAAGCATG-AAAGATAGGAAC---ATCGGACAAAATGAAAGGAAATGAAAGCATTTCCTAAAGCATTTAAAATGATGACAT----AAAAAAGTTTG--TTTA-----TATTTATCTAGCATGAGTT---AGGTGACTTTTTAAAAATGTAAAGATGAACTTCAGGATATTTATTACCAAGCTGGTCCAGACAGTT------------TG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17401622 370 - 41321030 CCTTTCAGTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTGAAGGGTAAAAATAATAATGGTGTTTGACTCAC-TTTCATACCTGGGAGCCGAAGATGTCCTTGCCAAATATCTTCTTGGCAGAGCTCTAG-TTGGACAGACACTTCCAAGAGATAAGCAAAGCATG-AAAGATAGGAAC---ATCGGATAAAATGAAAGGAAA-GGAAGCATTTCCTAAAGCATTTAAAATGATGACAT----AAAAAAGTTTG--TTTA-----TATTTATCAAGCATGAGTG---AGGTGACTTTTTAAAAATGTAAAGGTGAACTTCAGGATATTTATTACCAAGCTGGCCCAGACAGTT------------TG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475277 371 - 101219884 CCTTTCAGTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTGAAGGGTAAAAATAATAATGGTGTTTGACTCAC-TTTCATACCTGGGAGCTGAAGATGTCCTTGCCAAATATCTTCTTGGCAGAGCTCTAG-TTGGACAGACACTTCCAAGAGATAAGCAAAGCATG-AAAGATAGGAAC---ATCGGACAAAATGAAAGGAAATGAAAGCATTTCCTAAAGCATTTAAAATGATGACAT----AAAAAAGTTTG--TTTA-----TATTTATCAAGCATGAGTT---AGGTGACTTTTTAAAAATGTAAAGGTGAACTTCAGGATATTTATTACCAAGCTGGTCCAGACAGTT------------TG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857569 370 - 924385 CCTTTCAGTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTGAAGGGTAAAAATAATAATGGTGTTTGACTCAC-TTTCATACCTGGGAGCCGAAGATGTTCTTGCCAAATATCTTCTTGGCAGAGCTCTAA-TTGGACAGACACTTCCATGAGATAAGCAAAGCATG-AAAGATAGGAAC---ATCGGACAAAATGAAAGGAAA-GGAAGCATTTCCTAAAGCATTTTAAATGATGACAT----AAAAAAGTTTG--TTTA-----TATTTATCAAGCATGAATT---AGGTGACTTTTTAAAAATGTAAAGGTGAACTTCAGGATATTTATTACCAAGCTGGTCCAGACAGTT------------TG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701190 371 - 10587913 CCTTTCAGTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTTCTGAAGGGTAAAAATAATAATGGTGTTTGACTCAC-TTTCATACCTGGGAGCTGAAGATGTCCTTGCCAAATATCTTCTTGGCAGGGCTCTAG-TTGGACAGACACTTCCAAGAGATAAGCAAAGCATG-AAAGATAGGAAC---ATCGGACAAAATGAAAGGAAATGAAAGCATTTCCTAAAGCATTTAAAAGGATGACAT----AAAAAAGTTTG--TTTA-----TATTTATCAAACATAAGTT---AGGTGACTTTTTAAAAATGTAAGGATGAACTTCAGGATATTTATTACCAAGCTGGACCAGACAGTT------------TG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46020822 365 - 98464013 CC-----GTTAATAAATATGAGACAGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGTTTTTTCCTGAAGGGTGAAAATAATAATGGCGTTTGACTCAC-TTTTATACCTGGGAGCAGAAGATGTCCTTGCCAAATATCTTCTTGGCAGAGCTCTAG-TTGGACAGACACTTCCAAAAGATAAGCAAAGCATG-AAAGATATGAAC---ATCGGAC-AAATGAAAGGAAATGAAAACATTTCCTAAAGCATTTAAAATGATAACGT----AAAAATGTTTG--TTTA-----TATTTATCAAACGTAAGTT---AGGTGACTTTTTAAAAATGGAAAGATGAACTTCGGGATATTTATTACCAAGCTGGCCCAGACAGCT------------TG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703337 365 + 27742158 CCGTTCAGTTAATAAATATGAGACGGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTGAAGGGTGAAAATAATAATGGCGTTTGACTCAC-TTTTATACCTGGGAGCAGGAGATGTCCTTGCCAAATATCTTCTCCGCAGAGCTCTAG-TTGGACAGACACTTCCAAAAGATAAGCAAAGCACG-AAAGATACGAAC---ATCGGAT-AAAT-----GAAATGAAAGCATTTCCTAAAGCATTTAAATTGATAACAT----AAAAATGTTTG--TTTA-----TATTTATCAAACGTAAGTT---AGGTGACTTTTTAAAAATGGAAAGATGAATTTCGGGATATTTTTTACCAAGCTGGCCCAGACAGCT------------TG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 240897 369 - 4835464 CCGTTCAGTTAATAAATATGAGACGGAATCTTATAAAA-GGAATTGCAATCAGGATTTTCACAGAAGGATTTTACTGAAGGGTGAAAATAATAATGGCGTTTGACTCAC--TTTATACCTGGGAGCAGAAGATGTCCTTGCCAAATATCTTCTTGGCAGAGCTCTAG-TTGGACAGACACTTCCAAAAGATAAGCAAAGCatg-aaagatatgaac---atcggac-aaatgaaaggaaatgaaaGCATTTCCTAAAGCATTTAAAATGATAACAT----AAAAATGTTTG--TTTG-----TATTTATCAAATGTAAGTT---AGGTGACTTTTTAAAAATGGAAAGATGAACTTCAGGATATTTATTACCAAGCTGGCCCAGACAGCT------------TG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699503 370 + 4093027 CCATTCAGTTAATAAATATGAGACGGAATCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTGAACGGTGAAAATAATAATGGCATTTGACTCAC-TTTTATACCTGGGAGCAGAAGATGTCCTTGCCAAATATTTTCTTGGCAGAGCTCTAG-TTGGACAGACACTTCCAAAAGATAAGCAAAGCATG-AAAGATGCGAAC---ATAGGAC-AAATGAAAGGAAATGAAAGCATTTCCTAAAGCATTTAAAATGATAACGT----AAAAATGTTTG--TTTA-----TATTTATCAAATGTAAGTT---AGGTGACTTTTTAAAAATGGAAAGATGAACTTTGGGATATTTATTACCAAACTGGCCCAGACAGCT------------TG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1598835 368 - 9149476 CCTTTCAGTTAATAAATATGAGAGGGAGTCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTAAAGGGTAAAAATAATAATGGCGTTCGACTCAC-TTTTATACCTGGGAGCAAAAGGTGTCCTTGCGGAATATCTTCTGGGCAGAGCTCTAG-TTGGACATACACTTCCAAAAGATAAGCAAAGCATG-AAAGATATGAGC---ATTGGACA-----AAATGAAATAAAAGCATTTCCTAAAGCATTTAAAATGACAGCAT----AAAAAAGTTTG--TTTA-----TATTTATCAAACATAAGTT---AGGTGACTTTTTAAAAATGGAAGGATGAACTTCAGGATATTTATCACCAAGATGGCCCAGACAGtt----------catc i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 570911 371 + 2414909 CCTTTCAGTTAATAAATATGAGAGGGAGTCTTATAAAA-GGAAACGCAATCAGGATTTTCACAGAAGGTTTTTCCTAAAGGGTAAAAATAATAATGGCGTTTGACTCAC-TTTTATATCTAGGAGCAAAAGATGTCCTTGCCGAATATGTTCTGGGCAGAGCTCTAG-TTGGACAGACACTTCCAAAAGATAAGCAAAGCATG-AAAGATGTGAGC---ATTGGACAAAATGAAATGAAATAAAAGCATTTACTAAAGCATTTAAAATAACAACAT----AAAAAAGTTTG--TTTA-----TATTTATCAAACATAAGTT---AGGTGACTTTTTAAAAATGGAAGGATGAACTTCAGGATATTCATCACCAAGAACGTCCAGACAGCT------------tt i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11035217 392 + 30473821 CCTTTCAGTTAATAAATATGAGAGGAAGTCGTTTAAAA-GGAAATGCAATCAGGATTTTCACAGAAGG-TTTTCCTAAAGGGTAAAAATAATAATGACATTAGACTCACGTTTTATACCTGAGAGCAGAAGATGTCCTTGCCAAATATCTTCTTGGCAGAGCTGTAG-TTGGACAGACACTTCCAAAAGATAAGCAAAGCATGAAAAGATATGAGC---ACTGGACAAAATGAAATGAAATTAAAGTATTTCCTACAGCATTTAAAATGACAACAT----AAAAAAGTTTG--TTTATACTGTATTTATCAAACATAAGTCATAAGGTGACTTTTTAAAAATGGAAAGATGAACCTCAGGATATTTGTTACCAAAGTGTTCCAGACAGCAACCAACCAACcttc i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731386 367 - 149736546 CTTTTCCATTAATAAATATAAGAGGGAATTTTATAAAATGGAAAATCAATTGAGATTCTCACAGAAGGTTTTTCCTGGAGGGTAAGAATAAAAATGGCCTTTGACTTTC-TTTTACACCTAGGGGCAGAAGATGTCCTTGTCAAATATCTT-TCCGCAGAGCTGTAG-TTGGACAGACACTTCCCAAAGATAAGGAAAGTATAAAAAGATAGGAAT---ATTGGACAAAATAAAACGAGGAAAACTCATTTCCAACCACATTTTGAAtaacaatgc----agaaaagtttg-----------tatttatcacacataattt---aagtgagttttt-aaggcagaaagataaacttcaggatatctcctgcCTACATGGTCCAAAGGGCT------------TT i mm10.chr6 C 0 C 0 s canFam3.chr20 16580893 364 + 58134056 CCTTTCAGTTAATAAATATGAGAGGGAGTCTTATAAAA-GGAAATGCAATCAGGATTTTCACAGAAGGTTTTTCCTGAAGGGTAAAAATAATAGTGGTATTTGACTCAG-TTTTATACCTGGGAGCAGAAGATGTCCTTGCAAGACATCTT---GGCAGAGCTCTAG-TTGGACAGACAATCCCAAAAGATAAGCAAAGCATG-AAAGATATGAACAATACTGAACAAAATCAAATGAAATAAAAGCATTTTCCAAAGCATTTAAACTGACAGCAT--AAAAAAAAGTTTA--TTTA-----CATTTATAAAACATAAGTT---AAGTGACATTTTAAAAATAGAAAGATGGACTTCAAGATGTGT-----CAAATTGGT----ACAGTT------------TT i canFam3.chr20 C 0 I 3 s dasNov3.JH563077 1765617 376 - 2187301 CCTTTCAGTTAATAAATATGAAAGGGAGTCTTACAAAA-GGAAAGGCAATCAGGATTCTCACAGAAGGTTTTTCCTGAAGGGTAAAAATAATAGCAGCGTTTCCCTTGC-TTTTATACCTGTTAGCAGAAGATGTCCTTGCAAAATATCATTTTGGTAGAGCTCTAGTTTGGACAAACACTTCCAAAAGATAAGCAAAGCATG-AAAGATATGAAT---AAC--ACGAGACAAAATGAAATATGAGTATTTTCAAAAGCATTTAAATTGACAACATTTTTTTAAAAGTTGGTTTTTG-----CATTTATCATATCTAAGTT---AGGTGGCTTTTTAAAAATTGAAAGATGAACTTCAGGATGTTTACTGCTACGATAGCTCGGACAGCC------------tt i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e rhiRox1.KN296641v1 1358469 371 - 1467263 I e papAnu3.chr2 59537111 386 + 187378091 I e nasLar1.chr2 57708441 377 + 181502896 I e ponAbe2.chr3 69634845 387 + 202140232 I e rhiBie1.NW_016820128v1 1212971 371 - 2311269 I e tarSyr2.KE939134v1 134373 388 + 958716 I a score=119668.000000 s hg38.chrUn_KI270749v1 91108 7 + 158759 cattcat s panTro5.chr3 201978348 7 - 202621043 cattcat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746349 7 - 205426864 cattcat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562847 7 + 86207423 cattcat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045956 7 + 204787373 cattcat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977801 7 - 192460366 cattcat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089759 7 - 17224310 cattcat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17401992 7 - 41321030 cattcat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475648 7 - 101219884 cattcat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857939 7 - 924385 cattcat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701561 7 - 10587913 CGttcat i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1358840 7 - 1467263 cattcat i rhiRox1.KN296641v1 I 371 C 0 s rhiBie1.NW_016820128v1 1213342 7 - 2311269 cattcat i rhiBie1.NW_016820128v1 I 371 C 0 s calJac3.chr15 46021187 7 - 98464013 CCttcat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703702 7 + 27742158 cattcat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 241266 7 - 4835464 cattcat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699873 7 + 4093027 cattcat i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1599203 7 - 9149476 catttat i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 571282 7 + 2414909 cattcat i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11035609 7 + 30473821 cttcctt i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731753 7 - 149736546 CATTTGC i mm10.chr6 C 0 C 0 s canFam3.chr20 16581260 7 + 58134056 AATTTAA i canFam3.chr20 I 3 C 0 s dasNov3.JH563077 1765993 7 - 2187301 tatttat i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e papAnu3.chr2 59537111 386 + 187378091 I e nasLar1.chr2 57708441 377 + 181502896 I e ponAbe2.chr3 69634845 387 + 202140232 I e tarSyr2.KE939134v1 134373 388 + 958716 I a score=125765.000000 s hg38.chrUn_KI270749v1 91115 9 + 158759 tcatttact s panTro5.chr3 201978355 9 - 202621043 tcatttact i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746356 9 - 205426864 tcatttact i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562854 9 + 86207423 tcatttact i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045963 9 + 204787373 tcatttatt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977808 9 - 192460366 tcatttatt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089766 9 - 17224310 tcatttatt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17401999 9 - 41321030 tcatttatt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475655 9 - 101219884 tcatttatt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857946 9 - 924385 tcatttatt i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57708818 9 + 181502896 acatttact i nasLar1.chr2 I 377 C 0 s colAng1.NW_012114711v1 6701568 9 - 10587913 tcatttact i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1358847 9 - 1467263 acatttact i rhiRox1.KN296641v1 C 0 C 0 s rhiBie1.NW_016820128v1 1213349 9 - 2311269 acatttact i rhiBie1.NW_016820128v1 C 0 C 0 s calJac3.chr15 46021194 9 - 98464013 tcatatact i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703709 9 + 27742158 acatatact i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 241273 9 - 4835464 acatatact i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699880 9 + 4093027 tcatatact i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1599210 9 - 9149476 tcattcatt i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 571289 9 + 2414909 tcattcatt i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11035616 9 + 30473821 tcttccttt i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731760 7 - 149736546 --ACTTTGT i mm10.chr6 C 0 I 2 s canFam3.chr20 16581267 9 + 58134056 TTAGTTAAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1766000 9 - 2187301 ttatttatt i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e papAnu3.chr2 59537111 386 + 187378091 I e ponAbe2.chr3 69634845 387 + 202140232 I e tarSyr2.KE939134v1 134373 388 + 958716 I a score=23434.000000 s hg38.chrUn_KI270749v1 91124 1 + 158759 c s panTro5.chr3 201978364 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746365 1 - 205426864 c i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69635232 1 + 202140232 c i ponAbe2.chr3 I 387 C 0 s nomLeu3.chr21 67562863 1 + 86207423 c i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045972 1 + 204787373 c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977817 1 - 192460366 c i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089775 1 - 17224310 c i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402008 1 - 41321030 c i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59537497 1 + 187378091 c i papAnu3.chr2 I 386 C 0 s chlSab2.chr22 64475664 1 - 101219884 c i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857955 1 - 924385 c i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57708827 1 + 181502896 c i nasLar1.chr2 C 0 C 0 s colAng1.NW_012114711v1 6701577 1 - 10587913 c i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1358856 1 - 1467263 c i rhiRox1.KN296641v1 C 0 C 0 s rhiBie1.NW_016820128v1 1213358 1 - 2311269 c i rhiBie1.NW_016820128v1 C 0 C 0 s calJac3.chr15 46021203 1 - 98464013 c i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703718 1 + 27742158 c i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 241282 1 - 4835464 c i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699889 1 + 4093027 c i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1599219 1 - 9149476 c i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 571298 1 + 2414909 c i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11035625 1 + 30473821 c i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731769 1 - 149736546 T i mm10.chr6 I 2 C 0 s canFam3.chr20 16581276 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1766009 1 - 2187301 t i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e tarSyr2.KE939134v1 134373 388 + 958716 I a score=68940.000000 s hg38.chrUn_KI270749v1 91125 3 + 158759 gtt s panTro5.chr3 201978365 3 - 202621043 gtt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746366 3 - 205426864 gtt i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69635233 3 + 202140232 gtt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21 67562864 3 + 86207423 gtt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045973 3 + 204787373 gtt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977818 3 - 192460366 gtt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089776 3 - 17224310 gtt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402009 3 - 41321030 gtt i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59537498 3 + 187378091 gtt i papAnu3.chr2 C 0 C 0 s chlSab2.chr22 64475665 3 - 101219884 gtt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857956 3 - 924385 gtt i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57708828 3 + 181502896 gtt i nasLar1.chr2 C 0 C 0 s colAng1.NW_012114711v1 6701578 3 - 10587913 gtt i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1358857 3 - 1467263 gtt i rhiRox1.KN296641v1 C 0 I 449 s rhiBie1.NW_016820128v1 1213359 3 - 2311269 gtt i rhiBie1.NW_016820128v1 C 0 I 449 s calJac3.chr15 46021204 3 - 98464013 att i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703719 3 + 27742158 att i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 241283 3 - 4835464 gtt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699890 3 + 4093027 att i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 134761 3 + 958716 ATT i tarSyr2.KE939134v1 I 388 I 1 s micMur3.chr32 1599220 3 - 9149476 att i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 571299 3 + 2414909 att i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11035626 3 + 30473821 tct i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731770 3 - 149736546 ATT i mm10.chr6 C 0 C 0 s canFam3.chr20 16581277 2 + 58134056 -TT i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1766010 3 - 2187301 att i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I a score=141363.000000 s hg38.chrUn_KI270749v1 91128 7 + 158759 cattcat s panTro5.chr3 201978368 7 - 202621043 cattcat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746369 7 - 205426864 cattcat i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69635236 7 + 202140232 cattcat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21 67562867 7 + 86207423 cattcat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045976 7 + 204787373 cattcat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977821 7 - 192460366 cattcat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089779 7 - 17224310 cattcat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402012 7 - 41321030 cattcat i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59537501 7 + 187378091 cattcat i papAnu3.chr2 C 0 C 0 s chlSab2.chr22 64475668 7 - 101219884 cattcat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857959 7 - 924385 cattcat i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57708831 7 + 181502896 cattcat i nasLar1.chr2 C 0 I 442 s colAng1.NW_012114711v1 6701581 7 - 10587913 cattcat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46021207 7 - 98464013 cattcat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703722 7 + 27742158 cattcat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 241286 7 - 4835464 cattcat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699893 7 + 4093027 cattcat i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 134765 7 + 958716 CATTCTT i tarSyr2.KE939134v1 I 1 I 11 s micMur3.chr32 1599223 7 - 9149476 catccat i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 571302 7 + 2414909 tgttcat i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11035629 7 + 30473821 ctttcat i otoGar3.GL873534 C 0 I 284 s mm10.chr6 45731773 7 - 149736546 TGTTTGT i mm10.chr6 C 0 I 1 s canFam3.chr20 16581280 1 + 58134056 ------T i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1766013 7 - 2187301 tacttat i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I a score=107472.000000 s hg38.chrUn_KI270749v1 91135 5 + 158759 tcatt s panTro5.chr3 201978375 5 - 202621043 tcatt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746376 5 - 205426864 tcatt i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69635243 5 + 202140232 tcatt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21 67562874 5 + 86207423 tcatt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045983 5 + 204787373 tcatt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977828 5 - 192460366 tcatt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089786 5 - 17224310 tcatt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402019 5 - 41321030 tcatt i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59537508 5 + 187378091 tcatt i papAnu3.chr2 C 0 C 0 s chlSab2.chr22 64475675 5 - 101219884 tcatt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857966 5 - 924385 tcatt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701588 5 - 10587913 tcatt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46021214 5 - 98464013 tcatt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703729 5 + 27742158 tcatt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 241293 5 - 4835464 tcatt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699900 5 + 4093027 tcatt i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 134783 5 + 958716 TCAAT i tarSyr2.KE939134v1 I 11 I 1443 s micMur3.chr32 1599230 5 - 9149476 tcatt i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 571309 5 + 2414909 tcatt i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11035920 5 + 30473821 TCATT i otoGar3.GL873534 I 284 C 0 s mm10.chr6 45731781 5 - 149736546 TTCTT i mm10.chr6 I 1 C 0 s canFam3.chr20 16581281 5 + 58134056 TTACT i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1766020 5 - 2187301 ttatt i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e nasLar1.chr2 57708838 442 + 181502896 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I a score=55434.000000 s hg38.chrUn_KI270749v1 91140 4 + 158759 tatt s panTro5.chr3 201978380 4 - 202621043 TACT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746381 4 - 205426864 TACT i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69635248 4 + 202140232 tatt i ponAbe2.chr3 C 0 I 434 s nomLeu3.chr21 67562879 4 + 86207423 tatt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045988 4 + 204787373 tatt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977833 4 - 192460366 tatt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089791 4 - 17224310 tatt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402024 4 - 41321030 tatt i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59537513 4 + 187378091 tatt i papAnu3.chr2 C 0 I 434 s chlSab2.chr22 64475680 4 - 101219884 tatt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857971 4 - 924385 tatt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701593 4 - 10587913 tatt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46021219 4 - 98464013 tatC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703734 4 + 27742158 tatC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 241298 4 - 4835464 tatt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699905 4 + 4093027 tatC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1599235 4 - 9149476 tatt i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 571314 4 + 2414909 tatt i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11035925 4 + 30473821 TATT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731786 4 - 149736546 TACT i mm10.chr6 C 0 I 6 s canFam3.chr20 16581288 2 + 58134056 AA-- i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1766025 4 - 2187301 tatG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e nasLar1.chr2 57708838 442 + 181502896 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 134788 1443 + 958716 I a score=13976.000000 s hg38.chrUn_KI270749v1 91144 2 + 158759 GT- s panTro5.chr3 201978384 2 - 202621043 GT- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746385 2 - 205426864 GT- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562883 2 + 86207423 GT- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045992 2 + 204787373 tt- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977837 2 - 192460366 tt- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089795 2 - 17224310 GT- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402028 2 - 41321030 GT- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475684 2 - 101219884 GT- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857975 2 - 924385 GT- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701597 2 - 10587913 GT- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46021223 2 - 98464013 AT- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703738 2 + 27742158 GT- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 241302 2 - 4835464 GT- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699909 2 + 4093027 TT- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1599239 2 - 9149476 GT- i micMur3.chr32 C 0 I 1562 s proCoq1.NW_012148064v1 571318 2 + 2414909 GT- i proCoq1.NW_012148064v1 C 0 I 1511 s otoGar3.GL873534 11035929 2 + 30473821 GT- i otoGar3.GL873534 C 0 I 22 s mm10.chr6 45731796 2 - 149736546 GT- i mm10.chr6 I 6 I 5 s canFam3.chr20 16581290 2 + 58134056 AT- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1766029 2 - 2187301 -TT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 134788 1443 + 958716 I a score=280279.000000 s hg38.chrUn_KI270749v1 91146 32 + 158759 TTTA--GTTACTAC-TTACGAGG-TGAGTCTA-AAAT s panTro5.chr3 201978386 32 - 202621043 TTTA--GTTACTAC-TTACGAGG-TGAGTCTA-AAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746387 32 - 205426864 TTTA--GTTACTAC-TTACGAGG-TGAGTCTA-AAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562885 32 + 86207423 TTTT--GTTACTAC-TTAGGAGG-TGAGTCTA-AAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66045994 32 + 204787373 ttta--gttattAC-TTAGGAAG-TGAGTCTA-AAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977839 32 - 192460366 ttta--gttattAC-TTAGGAAG-TGAGTCTA-AAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089797 32 - 17224310 TTTA--GTTATTAC-TTAGGAGG-TGAGTCTA-AAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402030 32 - 41321030 TTTA--GTTATTAC-TTAGGAGG-TGAGTCTA-AAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475686 32 - 101219884 TTTA--GTTATTAC-TTAGGAGG-TGAGTCTA-AAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 857977 32 - 924385 TTTA--GTTATTAC-TTAGGAGG-TGAGTCTA-AAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701599 28 - 10587913 TTTA--GTTATTAC-TTAGGAGG-TGAGTCTA----- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46021225 32 - 98464013 TTTA--GTTCCTAC-TTAGGAGG-TGATTCTG-AAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703740 32 + 27742158 TTTA--GTTACTAC-TTAGGAGG-TGATTCTG-AAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 241304 32 - 4835464 TTTA--GTTACTAC-CTAGGATG-TGATTCTG-AAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699911 32 + 4093027 TTTA--GTTACCAC-TTAAGAGG-TGATTCTG-AAAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11035953 33 + 30473821 TTTA--TCTCTTTTATTAGGAGG-TGAGCCTA-AAAT i otoGar3.GL873534 I 22 C 0 s mm10.chr6 45731803 36 - 149736546 TTTATCATTTTTAG-CCAGGAGGCTAGGTCTAAAAAT i mm10.chr6 I 5 C 0 s canFam3.chr20 16581292 32 + 58134056 TCTA--ATT-TTAC-CGAGTAGGATGAATCTC-AAAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1766031 26 - 2187301 --------CTTTAC-TGGCtatg-gcagtttg-agat i dasNov3.JH563077 C 0 I 1975 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e proCoq1.NW_012148064v1 571320 1511 + 2414909 I e micMur3.chr32 1599241 1562 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 134788 1443 + 958716 I a score=513837.000000 s hg38.chrUn_KI270749v1 91178 48 + 158759 AAGGACAAGGCACCATAATATTTTCGAGCAAATATTCTCTAGTTTACT s panTro5.chr3 201978418 48 - 202621043 AAGGACAAGTCACCATAATATTTTCAAGGAAATATTCTCTAGTTTACT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746419 48 - 205426864 AAGGACAAGTCACCATAATATTTTCAAGGAAATATTCTCTAGTTTACT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562917 48 + 86207423 AAAGACAAGTCACCATAATATTTTCAAGCAAATATTCTCTAGTTTACT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046026 48 + 204787373 AAGGATAAGTCACCATAATATTTTTAAGCAAATATTCTCTAGTTTACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977871 48 - 192460366 AAGGATAAGTCACCATAATATTTTTAAGCAAATATTCTCTAGTTTACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089829 48 - 17224310 AAGGATAAGTCACCATAATATTTTTAAGCAAATATTCTCTAGTTTACT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402062 48 - 41321030 AAGGATAAGTCACCATAATATTTTTAAGCAAATATTCTCTAGTTTACT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475718 48 - 101219884 AAGGATAAGTCACCATAATATTTTTAAGCAAATATTCTCTAGTTTACT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858009 48 - 924385 AAGGATAAGTCACCATAATATTTTTAAGCAAATATTTTCTAGTTTACT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701627 48 - 10587913 AAGGATAAGTCACCATAATATTTTTAAGCAAATATTCTCTAGTTTACT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46021257 48 - 98464013 AAGGATAAGTCTCCATAATATTTTTAAGCAAATATTCTCTTATTTACT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703772 48 + 27742158 AAGATTAAGTCTCCATAATATTTTTAAGCAAATATTCTCTCGTTTACT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 241336 48 - 4835464 AAGGATAAGCCTCCATAATATTTTTAAGCAAATATTCTCTCGTATACT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3699943 48 + 4093027 AAGGATAACTCTCCATAATATTTTTAAGCAAATATTCTCTTGTTTACT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11035986 48 + 30473821 AAAGATGTGTCTCCATGATACAGATAAAGAAATATTCTCTAATTTACT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731839 48 - 149736546 AAAGATTGTTCCCCATGATATATTTAAGAAAATGTGGTTTAATTTGCT i mm10.chr6 C 0 C 0 s canFam3.chr20 16581324 48 + 58134056 AAAGACAAATCTCCATTATATACTTAATTAAATGCACTCAAATTTACT i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e proCoq1.NW_012148064v1 571320 1511 + 2414909 I e micMur3.chr32 1599241 1562 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 134788 1443 + 958716 I e dasNov3.JH563077 1766057 1975 - 2187301 I a score=58941.000000 s hg38.chrUn_KI270749v1 91226 5 + 158759 GTATG s panTro5.chr3 201978466 5 - 202621043 GTATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746467 5 - 205426864 GTATG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562965 5 + 86207423 GCATG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046074 5 + 204787373 GTATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977919 5 - 192460366 GTATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089877 5 - 17224310 GTATG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402110 5 - 41321030 GTATG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475766 5 - 101219884 GTATG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858057 5 - 924385 GTATG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701675 5 - 10587913 GTATG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46021305 5 - 98464013 GTATG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703820 5 + 27742158 GTATG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 241384 5 - 4835464 GTATG i cebCap1.NW_016107467v1 C 0 I 2605 s aotNan1.NW_018502033v1 3699991 5 + 4093027 GTATG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11036034 5 + 30473821 GTGTG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731887 5 - 149736546 GCCCG i mm10.chr6 C 0 C 0 s canFam3.chr20 16581372 5 + 58134056 CTATG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768032 5 - 2187301 GTTTA i dasNov3.JH563077 I 1975 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e proCoq1.NW_012148064v1 571320 1511 + 2414909 I e micMur3.chr32 1599241 1562 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 134788 1443 + 958716 I a score=54070.000000 s hg38.chrUn_KI270749v1 91231 5 + 158759 CATTA s panTro5.chr3 201978471 5 - 202621043 CATTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746472 5 - 205426864 CATTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562970 5 + 86207423 CATTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046079 5 + 204787373 CATTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977924 5 - 192460366 CATTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089882 5 - 17224310 CATTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402115 5 - 41321030 CATTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475771 5 - 101219884 CATTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858062 5 - 924385 CATTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701680 5 - 10587913 CACTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46021310 5 - 98464013 CATCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703825 5 + 27742158 CATCA i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3699996 5 + 4093027 CATCA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11036039 5 + 30473821 TATTA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731892 5 - 149736546 CATTA i mm10.chr6 C 0 C 0 s canFam3.chr20 16581377 5 + 58134056 CACTA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768037 5 - 2187301 CAGTG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e proCoq1.NW_012148064v1 571320 1511 + 2414909 I e micMur3.chr32 1599241 1562 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 134788 1443 + 958716 I e cebCap1.NW_016107467v1 241389 2605 - 4835464 I a score=11709.000000 s hg38.chrUn_KI270749v1 91236 1 + 158759 T s panTro5.chr3 201978476 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746477 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562975 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046084 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977929 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089887 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402120 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475776 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858067 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701685 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46021315 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27703830 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3700001 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 136231 1 + 958716 A i tarSyr2.KE939134v1 I 1443 C 0 s otoGar3.GL873534 11036044 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45731897 1 - 149736546 T i mm10.chr6 C 0 I 4586 s canFam3.chr20 16581382 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768042 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e proCoq1.NW_012148064v1 571320 1511 + 2414909 I e micMur3.chr32 1599241 1562 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e cebCap1.NW_016107467v1 241389 2605 - 4835464 I a score=43146.000000 s hg38.chrUn_KI270749v1 91237 3 + 158759 TTG s panTro5.chr3 201978477 3 - 202621043 TTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746478 3 - 205426864 TTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562976 3 + 86207423 TTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046085 3 + 204787373 TTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977930 3 - 192460366 TTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089888 3 - 17224310 TTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402121 3 - 41321030 TTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475777 3 - 101219884 TTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858068 3 - 924385 TTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701686 3 - 10587913 TTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46021316 3 - 98464013 TTG i calJac3.chr15 C 0 I 2750 s saiBol1.JH378125 27703831 3 + 27742158 TTG i saiBol1.JH378125 C 0 I 2760 s aotNan1.NW_018502033v1 3700002 3 + 4093027 TTG i aotNan1.NW_018502033v1 C 0 I 2646 s tarSyr2.KE939134v1 136232 3 + 958716 TTG i tarSyr2.KE939134v1 C 0 C 0 s otoGar3.GL873534 11036045 3 + 30473821 TTG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16581383 3 + 58134056 TTG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768043 3 - 2187301 TTG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e proCoq1.NW_012148064v1 571320 1511 + 2414909 I e mm10.chr6 45731898 4586 - 149736546 I e micMur3.chr32 1599241 1562 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e cebCap1.NW_016107467v1 241389 2605 - 4835464 I a score=15158.000000 s hg38.chrUn_KI270749v1 91240 2 + 158759 -GC s panTro5.chr3 201978480 2 - 202621043 -GC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746481 2 - 205426864 -GC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562979 2 + 86207423 -GC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046088 2 + 204787373 -GC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977933 2 - 192460366 -GC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089891 2 - 17224310 -GC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402124 2 - 41321030 -GC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475780 2 - 101219884 -GC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858071 2 - 924385 -GC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701689 2 - 10587913 -AC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024069 2 - 98464013 -AC i calJac3.chr15 I 2750 C 0 s saiBol1.JH378125 27706594 2 + 27742158 -GC i saiBol1.JH378125 I 2760 C 0 s cebCap1.NW_016107467v1 243994 2 - 4835464 -GC i cebCap1.NW_016107467v1 I 2605 C 0 s tarSyr2.KE939134v1 136235 2 + 958716 -GC i tarSyr2.KE939134v1 C 0 I 602 s otoGar3.GL873534 11036048 2 + 30473821 -GC i otoGar3.GL873534 C 0 I 1753 s canFam3.chr20 16581386 2 + 58134056 -AC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768046 2 - 2187301 GG- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e proCoq1.NW_012148064v1 571320 1511 + 2414909 I e mm10.chr6 45731898 4586 - 149736546 I e micMur3.chr32 1599241 1562 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e aotNan1.NW_018502033v1 3700005 2646 + 4093027 I a score=25976.000000 s hg38.chrUn_KI270749v1 91242 2 + 158759 CT s panTro5.chr3 201978482 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746483 2 - 205426864 CT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562981 2 + 86207423 CT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046090 2 + 204787373 CT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977935 2 - 192460366 CT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089893 2 - 17224310 CT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402126 2 - 41321030 CT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475782 2 - 101219884 CT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858073 2 - 924385 CT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701691 2 - 10587913 CT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024071 2 - 98464013 CT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706596 2 + 27742158 CT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 243996 2 - 4835464 CT i cebCap1.NW_016107467v1 C 0 C 0 s otoGar3.GL873534 11037803 2 + 30473821 CT i otoGar3.GL873534 I 1753 C 0 s canFam3.chr20 16581388 2 + 58134056 CT i canFam3.chr20 C 0 I 1519 s dasNov3.JH563077 1768048 2 - 2187301 CT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e proCoq1.NW_012148064v1 571320 1511 + 2414909 I e mm10.chr6 45731898 4586 - 149736546 I e micMur3.chr32 1599241 1562 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e aotNan1.NW_018502033v1 3700005 2646 + 4093027 I a score=12690.000000 s hg38.chrUn_KI270749v1 91244 2 + 158759 -AC s panTro5.chr3 201978484 2 - 202621043 -AC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746485 2 - 205426864 -AC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562983 2 + 86207423 -AC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046092 2 + 204787373 -AC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977937 2 - 192460366 -AC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089895 2 - 17224310 -AC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402128 2 - 41321030 -AC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475784 2 - 101219884 -AC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858075 2 - 924385 -AC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701693 2 - 10587913 -AC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024073 2 - 98464013 -AC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706598 2 + 27742158 -AC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 243998 2 - 4835464 -AC i cebCap1.NW_016107467v1 C 0 C 0 s otoGar3.GL873534 11037805 2 + 30473821 -AC i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1768050 2 - 2187301 GG- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e proCoq1.NW_012148064v1 571320 1511 + 2414909 I e mm10.chr6 45731898 4586 - 149736546 I e micMur3.chr32 1599241 1562 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e aotNan1.NW_018502033v1 3700005 2646 + 4093027 I e canFam3.chr20 16581390 1519 + 58134056 I a score=172609.000000 s hg38.chrUn_KI270749v1 91246 17 + 158759 TAAAATTAGCTTGCAAT s panTro5.chr3 201978486 17 - 202621043 TAAAATTAGCTTACAGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746487 17 - 205426864 TAAAATTAGCTTGCAGT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67562985 17 + 86207423 TAAAATTAGCTTGCAGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046094 17 + 204787373 TAAAATTAGCTTGCAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977939 17 - 192460366 TAAAATTAGCTTGCAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089897 17 - 17224310 TAAAATTAGCTTGCAGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402130 17 - 41321030 TAAAATTAGCTTGCAGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475786 17 - 101219884 TAAAATTAGCTTGCAGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858077 17 - 924385 TGAAATTAGCTTGCAGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701695 17 - 10587913 TAAAATTAGCTTGCAGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024075 17 - 98464013 TAAAATTAGCTTGCTGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706600 17 + 27742158 TAAAATTAGCTTGCTGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244000 17 - 4835464 TAAAATTAGCTTACTGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3702651 17 + 4093027 TAAAATTAGCTTGCTGC i aotNan1.NW_018502033v1 I 2646 C 0 s otoGar3.GL873534 11037807 17 + 30473821 TGAAATTATCTTGCTTT i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16582909 17 + 58134056 TAGAGTTCTCTTGCTAA i canFam3.chr20 I 1519 C 0 s dasNov3.JH563077 1768052 17 - 2187301 TAGAGATTTCTTGTTGA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e proCoq1.NW_012148064v1 571320 1511 + 2414909 I e mm10.chr6 45731898 4586 - 149736546 I e micMur3.chr32 1599241 1562 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=219185.000000 s hg38.chrUn_KI270749v1 91263 13 + 158759 AACTCATCCAAAC s panTro5.chr3 201978503 13 - 202621043 AACTCATCCAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746504 13 - 205426864 AACTCATCCAAAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563002 13 + 86207423 AACTCATCCAAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046111 13 + 204787373 AACTCATCCAAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977956 13 - 192460366 AACTCATCCAAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089914 13 - 17224310 AACTCATCCAAAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402147 13 - 41321030 AACTCATCCAAAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475803 13 - 101219884 AACTCATCCAAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858094 13 - 924385 AACTCATCCAAAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701712 13 - 10587913 AACTCATCCAAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024092 13 - 98464013 AACTCATCCAAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706617 13 + 27742158 AACTCATCCAAAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244017 13 - 4835464 AACTCATCCAAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3702668 13 + 4093027 AACTCATCCAAAC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1600803 13 - 9149476 AACTCATGCAAAC i micMur3.chr32 I 1562 C 0 s proCoq1.NW_012148064v1 572831 13 + 2414909 AACTCATCCAAAC i proCoq1.NW_012148064v1 I 1511 C 0 s otoGar3.GL873534 11037825 13 + 30473821 AACTCATCCAAAC i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16582926 13 + 58134056 AACTCCTCCAAAC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768069 13 - 2187301 AACTCCTCTAAAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e mm10.chr6 45731898 4586 - 149736546 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=360023.000000 s hg38.chrUn_KI270749v1 91276 25 + 158759 ACAGCCTTACTAGCTCCATGATTGT s panTro5.chr3 201978516 25 - 202621043 ACAGCCTTACTAGCTCCATGATTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746517 25 - 205426864 ACAGCCTTACTAGCTCCATGATTGT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563015 25 + 86207423 ATAGCCTTACTAGCTCCATGATTGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046124 25 + 204787373 ACAGCCTCACTAGCTCCATGATTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977969 25 - 192460366 ACAGCCTCACTAGCTCCATGATTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089927 25 - 17224310 ACAGCCTCACTAGCTCCATGATTGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402160 25 - 41321030 ACAGTCTTACTAGCTCCATGATTGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475816 25 - 101219884 ACAGTCTTACTAGCTCCATGATTGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858107 25 - 924385 ACAGTCTTACTAGCTCCATGATTGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701725 25 - 10587913 ACAGCCTTACTAGCTCCATGATTGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024105 25 - 98464013 AAAGCCTTACTAGCTCTATGATTGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706630 25 + 27742158 AAAGACTTACTAGCTCTATAATTGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244030 25 - 4835464 AAAGCCTTACTAGCTTAATGATTGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3702681 25 + 4093027 AAAGCCTTACTAGCTCTATGATTGT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1600816 25 - 9149476 ACAGCCTTAATAGCTCCATGATTGT i micMur3.chr32 C 0 I 588 s proCoq1.NW_012148064v1 572844 25 + 2414909 ACAACCTTAATAGCTCCATGATTGT i proCoq1.NW_012148064v1 C 0 I 2 s otoGar3.GL873534 11037838 25 + 30473821 ATGGCCTTAATAGCTACATGACTGT i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45736484 25 - 149736546 ACATCCTTATTGGCTCCCCAACTGT i mm10.chr6 I 4586 I 5 s canFam3.chr20 16582939 25 + 58134056 CTACTCCTACTAGCTCCATTGTTGT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768082 25 - 2187301 CTTGCCTTACTATCTCCATCATCAT i dasNov3.JH563077 C 0 I 620 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=9418.000000 s hg38.chrUn_KI270749v1 91301 1 + 158759 --T s panTro5.chr3 201978541 1 - 202621043 --T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746542 1 - 205426864 --T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563040 1 + 86207423 --T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046149 1 + 204787373 --T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60977994 1 - 192460366 --T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089952 1 - 17224310 --T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402185 1 - 41321030 --T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475841 1 - 101219884 --T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858132 1 - 924385 --T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701750 1 - 10587913 --T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024130 1 - 98464013 --T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706655 1 + 27742158 --T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244055 1 - 4835464 --T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3702706 1 + 4093027 --T i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 572871 1 + 2414909 --T i proCoq1.NW_012148064v1 I 2 C 0 s otoGar3.GL873534 11037865 1 + 30473821 --T i otoGar3.GL873534 I 2 C 0 s canFam3.chr20 16582964 3 + 58134056 GTG i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e mm10.chr6 45736509 5 - 149736546 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e dasNov3.JH563077 1768107 620 - 2187301 I a score=101926.000000 s hg38.chrUn_KI270749v1 91302 8 + 158759 TAGTGgaa s panTro5.chr3 201978542 8 - 202621043 TAGTGGAA i panTro5.chr3 C 0 I 11 s panPan2.chr3 204746543 8 - 205426864 TAGTGGAA i panPan2.chr3 C 0 I 11 s nomLeu3.chr21 67563041 8 + 86207423 TAGTGGAA i nomLeu3.chr21 C 0 I 11 s rheMac8.chr2 66046150 8 + 204787373 TAGTGGAA i rheMac8.chr2 C 0 I 11 s macFas5.chr2 60977995 8 - 192460366 TAGTGGAA i macFas5.chr2 C 0 I 11 s macNem1.NW_012018021v1 11089953 8 - 17224310 TAGTGGAA i macNem1.NW_012018021v1 C 0 I 11 s cerAty1.NW_012009469v1 17402186 8 - 41321030 TAGTGGAA i cerAty1.NW_012009469v1 C 0 I 11 s chlSab2.chr22 64475842 8 - 101219884 TAGTGGAA i chlSab2.chr22 C 0 I 11 s manLeu1.NW_012098965v1 858133 8 - 924385 TAGTGGAA i manLeu1.NW_012098965v1 C 0 I 11 s colAng1.NW_012114711v1 6701751 8 - 10587913 TAGTGGAA i colAng1.NW_012114711v1 C 0 I 11 s calJac3.chr15 46024131 8 - 98464013 TAGTGAAA i calJac3.chr15 C 0 I 11 s saiBol1.JH378125 27706656 8 + 27742158 TAGTGGAA i saiBol1.JH378125 C 0 I 11 s cebCap1.NW_016107467v1 244056 8 - 4835464 TAGTGGAA i cebCap1.NW_016107467v1 C 0 I 11 s aotNan1.NW_018502033v1 3702707 8 + 4093027 TAGTGGAA i aotNan1.NW_018502033v1 C 0 I 11 s proCoq1.NW_012148064v1 572872 8 + 2414909 TTGTGGAA i proCoq1.NW_012148064v1 C 0 I 12 s otoGar3.GL873534 11037866 8 + 30473821 TTGTGGAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45736514 8 - 149736546 TTATAGAA i mm10.chr6 I 5 I 2 s canFam3.chr20 16582967 6 + 58134056 TTGTGG-- i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1768727 8 - 2187301 TGATGCAA i dasNov3.JH563077 I 620 C 0 e eulFla1.LGHW01000501v1 4162 1956 + 635616 I e eulMac1.LGHX01000499v1 4026 1956 + 631505 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=14275.000000 s hg38.chrUn_KI270749v1 91310 1 + 158759 c s panTro5.chr3 201978561 1 - 202621043 c i panTro5.chr3 I 11 C 0 s panPan2.chr3 204746562 1 - 205426864 c i panPan2.chr3 I 11 C 0 s nomLeu3.chr21 67563060 1 + 86207423 c i nomLeu3.chr21 I 11 C 0 s rheMac8.chr2 66046169 1 + 204787373 c i rheMac8.chr2 I 11 C 0 s macFas5.chr2 60978014 1 - 192460366 C i macFas5.chr2 I 11 C 0 s macNem1.NW_012018021v1 11089972 1 - 17224310 c i macNem1.NW_012018021v1 I 11 C 0 s cerAty1.NW_012009469v1 17402205 1 - 41321030 c i cerAty1.NW_012009469v1 I 11 C 0 s chlSab2.chr22 64475861 1 - 101219884 c i chlSab2.chr22 I 11 C 0 s manLeu1.NW_012098965v1 858152 1 - 924385 c i manLeu1.NW_012098965v1 I 11 C 0 s colAng1.NW_012114711v1 6701770 1 - 10587913 C i colAng1.NW_012114711v1 I 11 C 0 s calJac3.chr15 46024150 1 - 98464013 C i calJac3.chr15 I 11 C 0 s saiBol1.JH378125 27706675 1 + 27742158 C i saiBol1.JH378125 I 11 C 0 s cebCap1.NW_016107467v1 244075 1 - 4835464 C i cebCap1.NW_016107467v1 I 11 C 0 s aotNan1.NW_018502033v1 3702726 1 + 4093027 C i aotNan1.NW_018502033v1 I 11 C 0 s proCoq1.NW_012148064v1 572892 1 + 2414909 c i proCoq1.NW_012148064v1 I 12 C 0 s eulMac1.LGHX01000499v1 5982 1 + 631505 C i eulMac1.LGHX01000499v1 I 1956 I 230 s eulFla1.LGHW01000501v1 6118 1 + 635616 C i eulFla1.LGHW01000501v1 I 1956 I 1525 s otoGar3.GL873534 11037874 1 + 30473821 T i otoGar3.GL873534 C 0 I 12 s dasNov3.JH563077 1768735 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45736522 2 - 149736546 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e canFam3.chr20 16582973 1 + 58134056 I a score=1269418.000000 s hg38.chrUn_KI270749v1 91311 118 + 158759 atg------ggagtatgatgtaaaatgggctatatccttgttatctcatgagcaccactctggcacagg---cttctaccagcaagggtatccc---agtagcagcagacaggcatgaagtttttcatga s panTro5.chr3 201978562 117 - 202621043 atg------ggagta-gatgtaaaatgggctatatccttgatacctcatgagcaccactctggcacagg---cttctaccagcaagggtatccc---agtagcagcagacaggcatgaagtttttcatga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746563 117 - 205426864 atg------ggagta-gatgtaaaatgggctatatccttgatacctcatgagcaccactctggcacagg---cttctaccagcaagggtatccc---agtagcagcagacaggcatgaagtttttcatga i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563061 118 + 86207423 atg------ggagtatgatgtaaaaagggctatatccttgatacctcatgagcaccactctggcacagg---cttccaacagcaagggtatccc---agtagcgacagacaggcatGAAGTTTTTCATGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046170 118 + 204787373 atg------ggagtatgatgtaaaatgggctatatcctcgatatctcatgagcaccactctggcacagg---cttccaccagcaagggtatcct---agtagcagcaaacaggcatgaagtttttcatta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978015 118 - 192460366 ATG------GGAGTATGATGTAAAATGGGCTATATCCTCGATATCTCATGAGCACCACTCTGGCACAGG---CTTCCACCAGCAAGGGTATCCT---AGTAGCAGCAAACAGGCATGAAGTTTTTCATTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11089973 118 - 17224310 atg------ggagtatgatgtaaaatgggctatatcctcgatatctcatgagcaccactctggcacagg---cttccaccagcaagggtatcct---agtagcagcaaacaggcatGAAGTTTTTCATTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402206 117 - 41321030 atg------ggagtatgatgtaaaatgggctatattcttggtatctcatgagcaccactctggcacggg---cttccaccagcaagggtatcct---agtagcagcagacaggcatgaag-ttttcatta i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475862 118 - 101219884 atg------ggagtatgatgtaaaatgggctatatcctcggcatctcatgagcaccactctggcacagg---cttccaccagcaagggtatcct---agtagcagcagacaggcatGAAGTTTTTCATTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858153 117 - 924385 atg------ggagtatgatgtaaaatggactatattctcggtatctcatgagtaccactctggcacggg---cttccaccagcaagggtatcct---agtagcagcagacaggcatgaag-ttttcatta i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701771 117 - 10587913 ATG------GGAGTATGATGTAAAATGGGCTATATCATCGATATCTCATGAGCACCACTCTGGCACTGG---CTTCCaccagcaagggtatcct---agtagcagcagacaggcatg-agtttttcatta i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024151 121 - 98464013 ATG------GTAGTATGAGCTAAAATGGGCTATATCTGCAATATCTTATGAGCATCACTCTGACATGGGCTTCTTCCaccagcaagggtaatcc---agcagcagcagacaggcatgaagtttttcatca i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706676 121 + 27742158 ATG------GTAGTATGAGCTAAAATGAGCTATATCAGCAATACCTTATGAGCATCACTCTGACATGAGCTTCTTCCaccagcaaggttatctc---agcagcagcagacaggcatgaagttttccatca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244076 124 - 4835464 ATG------GTAGTATGAGCTAAAATGACCTATATCAGCAATACCTTATAAGCATCACTCTGACATGAGCTTCTTCCACCAGCAAGTATATCTCAGAAGCAGCAGCAGACAGGCATAAAGTTTTTCATCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3702727 121 + 4093027 ATG------GTAGTATGAGCTAAAATGGGCTATATCTGCAATACCTTATGAGCATCACTCTGACATGGGCTTCTTCCACCAGCAAAGGTAACCC---AGCAGCATCAGACAGGCATGAAGTTTTTCATCA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 572893 118 + 2414909 atg------gaagtatgatttaaattgggctatgtcctggacacctcatgggtactactctggcagagt---attcaaccagaagggatatccc---agtagcagtagacaagcatgaagttttttatga i proCoq1.NW_012148064v1 C 0 I 285 s otoGar3.GL873534 11037887 117 + 30473821 GTG------GAAGTGTGATCTGAATTGGGCTG-ATCCCAGCCACCTCACGGGTACCACTCTGgcagagg---cttcaaccaggaagggtatccc---agtcacagtaaataagcacgaactctttcatga i otoGar3.GL873534 I 12 C 0 s mm10.chr6 45736524 114 - 149736546 ATGGGCAATGGGGAGTGCCCTAAAATAAACTGACTACCTGAGATCCTATAAACAGCATTCTGGCAGGAG---TTTTAATTTGCCAG-ATATCCC---TTTCCTAATATTCA---------TTTTTTTTAA i mm10.chr6 I 2 I 3 s canFam3.chr20 16582974 114 + 58134056 GTA------AGGGTAGAACATA----GGACCCCATTACTGATGCTTTATGGacaccagtctgactgggg---cttcaaccagcaagagtaaccc---cggagcagtagacaagtgtgaagctttatatga i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1768736 107 - 2187301 ATG------GTAGT--GACCTAAAATAGGCTATTTCACTGGTGTTTCATGGGCACCACTctgtcagggt---cttcaaccagcaagggcatctc------------agacaagcatgaagttttttatgg i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 5983 230 + 631505 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=1134292.000000 s hg38.chrUn_KI270749v1 91429 110 + 158759 tgtgcatctgacagtgataccatgtgatattgataagcaatggc-aTTGGCA-----TCTGGAATCT---GTCTCACTGGGTTTGGCAGAAGGACCTAGAGACAGTATTAGATTTTTTT s panTro5.chr3 201978679 110 - 202621043 tgtgcatctgacagtgataccatgtgatattgataagcaatggc-aTTGGCA-----TCTGGAATCT---GTCTCACTGGGTTTGGCAGAAGGACCTAGAGACAGTATTAGATTTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746680 110 - 205426864 tgtgcatctgacagtgataccatgtgatattgataagcaatggc-aTTGGCA-----TCTGGAATCT---GTCTCACTGGGTTTGGCAGAAGGACCTAGAGACAGTATTAGATTTTTTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563179 110 + 86207423 TGTGCATCTGACAATGATACCATGTGATATTGATAAGCTATGGC-ATTGGCA-----TCCGGAATCT---GTCTCACTGGGTTTGGCAGAAGGACCTAGAGACAGTATTAGATTTTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046288 110 + 204787373 tgcacatctgacagtgataccatgtgatatcaataagcaatggc-aCTGGCA-----TCCGAAATCT---GTCTCACTGGGTTTGGCAGAAGGACCTAGAGACAGTATTAGATTTGTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978133 110 - 192460366 TGCACATCTGACAGTGATACCATGTGATATCAATAAGCAATGGC-ACTGGCA-----TCCGAAATCT---GTCTCACTGGGTTTGGCAGAAGGACCTAGAGACAGTATTAGATTTGTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11090091 110 - 17224310 TGCACATCTGACAGTGATACCATGTGATATCAATAAGCAATGGC-ACTGGCA-----TCCGAAATCT---GTCTCACTGGGTTTGGCAGAAGGACCTAGAGACAGTATTAGATTTGTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402323 110 - 41321030 tgcacatctgacagtgataccatgtaatatcaataagcaatggc-aTTGGCA-----TCCGAAATCT---GTCTCACTGGGTTTGGCAGAAGGACCTAGAGACAGTATTAGATTTGTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64475980 110 - 101219884 TGCACATCTGACAGTGATACCATGTGATATCAATAAGCAATGGC-ATTGGCA-----TCTGAAATCT---GTCTCACTGGGTTCGGCAGAAGGACCTAGAGATAGTATTAGATTTGTCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858270 110 - 924385 tgcacgtctgacagtgataccatgtgatatcaataagcaatggc-aTTGGCA-----TCCGAAATCT---GTCTCACTGGGTTTGGCAGAAGGACCTAGAGACAGTATTAGATTTGTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701888 110 - 10587913 tgcacatctgacagtgataccatgtgatatcaataagcaatggc-aTTGGCA-----TCCGAAATCT---GTCTCACTGGGTTTGGAAGAAGGACCTAGAGACAGTATTAGATTTTTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024272 109 - 98464013 tgaacatctgacagtgataccatgtgatattgataaggaatggc-aTTGGCA-----TCTGGAATCT---GTCTCACTGGGTTTGACAGAAGGACCTAGAGACAGTATTAGA-TTTTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706797 109 + 27742158 tgagcatctgacagtgataccatgtgatattgataaggaatggc-aTTGGCA-----TCTGGAATCT---GTCTCACTGGGTTTGAAAGAAGGACCTAGAGACA-TACTAGATTTTTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244200 110 - 4835464 TGTGCATCTGACAGTGATACCACGTGATATTGATAAGGAATGGC-ATTGGCA-----TCTGGAAACT---GTCTCACTGGGTTTGACAGAAGGACCTGGAGACAGTATTAGATTTTTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3702848 110 + 4093027 TGAGCATCTAACAGTGATACCATGTGATATTGATAAGGAATGGC-ATTGGCA-----TCTGGAATCT---GTCTCACTGGGTTTGACAGAAGGACCTAGAGACAGTATTAGATTTATTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11038004 110 + 30473821 ccagcctctgacagtaactcagtgtgacactgagaagcaatggc-aTTGGCA-----TTCGAAATCT---GAGTCTCTATATCTGGCAGGAGGGCAGAGAGACAGTACTAAATGTTTTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45736641 100 - 149736546 CGTTAACCTTAAGGCAATGCCATTCAATA---AGGAACAATAAC-ATTGATC-----TCCAGAGAAT---AATAAACTGCGCTGTTCAGAA-------CACACGTTACTAGATTTCGTT i mm10.chr6 I 3 I 1 s canFam3.chr20 16583088 114 + 58134056 ccagcctttgtcagtaaaactgcttga-attgagaaggaatggc-attggtgca--ctgttgagactcaggtctttctgtgtttggCAGAAGGGCAGAGAAACAATACCAGATTCTTT- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768843 109 - 2187301 -acaggttcaacagctacactatgtgatgttaagagaaagtggcaattggtgcactcttcagactcc-agatctttctgcatttggCAGA--------GAGACAGTATGAGATTTTTTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 5983 230 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=314540.000000 s hg38.chrUn_KI270749v1 91539 28 + 158759 CCCAAAAGAGAAAATGGGGTT--TTCCAAT s panTro5.chr3 201978789 28 - 202621043 CCCAGAAGAGAAAATGGGGTT--TTCCAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746790 28 - 205426864 CCCAGAAGAGAAAATGGGGTT--TTCCAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563289 28 + 86207423 CCCAGAAGAGAAAATGGGGTG--TTCCCAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046398 28 + 204787373 CCCAGAAGAGAAAATGGGGTG--TTCCAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978243 28 - 192460366 CCCAGAAGAGAAAATGGGGTG--TTCCAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11090201 28 - 17224310 CCCAGAAGAGAAAATGGGGTG--TTCCAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402433 28 - 41321030 CCCAGAAGAGAAAATGCGGTA--TTCCAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64476090 28 - 101219884 CCCAGAAGAGAAAATGAAGTG--TTCCAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858380 28 - 924385 CCCAGAAGAGAAAATGCGGTG--TTCCAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6701998 28 - 10587913 CCCAGAAGAGAAAATGGGATG--TTCCAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024381 28 - 98464013 CCCAAAAGAAAAAATGGGGTG--TTCCAGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706906 28 + 27742158 CCCAGAAGAGAAAATGGGGTG--TTCCAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244310 28 - 4835464 CCCAGAAGAGAAAATGGGGTG--TTCCAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3702958 28 + 4093027 CCCAGAACAGAAAATGGGGTG--TTCCAAT i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 6213 28 + 631505 CCTAGCAGGGCAGATGAGATG--TACCAAT i eulMac1.LGHX01000499v1 I 230 I 1267 s otoGar3.GL873534 11038114 28 + 30473821 CTTAGCAGGGCAGATTGGATG--TACCAAT i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45736742 27 - 149736546 CCTGGCAAAGCATATTAAATGACTTTT--- i mm10.chr6 I 1 C 0 s canFam3.chr20 16583202 28 + 58134056 CCTAGCAGAACAGATACGGTA--ATCTAAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768952 27 - 2187301 -CTAGCAGGACACATGGGGTG--GTCCAAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1358860 449 - 1467263 I e papAnu3.chr2 59537517 434 + 187378091 I e nasLar1.chr2 57708838 442 + 181502896 I e ponAbe2.chr3 69635252 434 + 202140232 I e rhiBie1.NW_016820128v1 1213362 449 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=25300.000000 s hg38.chrUn_KI270749v1 91567 1 + 158759 G s panTro5.chr3 201978817 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746818 1 - 205426864 G i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69635686 1 + 202140232 G i ponAbe2.chr3 I 434 I 16 s nomLeu3.chr21 67563317 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046426 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978271 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11090229 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402461 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59537951 1 + 187378091 G i papAnu3.chr2 I 434 I 66 s chlSab2.chr22 64476118 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858408 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57709280 1 + 181502896 G i nasLar1.chr2 I 442 I 107 s colAng1.NW_012114711v1 6702026 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1359309 1 - 1467263 G i rhiRox1.KN296641v1 I 449 I 113 s rhiBie1.NW_016820128v1 1213811 1 - 2311269 G i rhiBie1.NW_016820128v1 I 449 I 132 s calJac3.chr15 46024409 1 - 98464013 G i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706934 1 + 27742158 G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244338 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3702986 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45736769 1 - 149736546 G i mm10.chr6 C 0 C 0 s canFam3.chr20 16583230 1 + 58134056 G i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768979 1 - 2187301 G i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e micMur3.chr32 1600841 588 - 9149476 I e tarSyr2.KE939134v1 136237 602 + 958716 I e otoGar3.GL873534 11038142 1 + 30473821 I a score=110908.000000 s hg38.chrUn_KI270749v1 91568 13 + 158759 ATTAATTG-AAAAA s panTro5.chr3 201978818 13 - 202621043 ATTAATTG-AAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746819 13 - 205426864 ATTAATTG-AAAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563318 13 + 86207423 ATtaattg-aataa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046427 13 + 204787373 AATAATTG-GAAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978272 13 - 192460366 AATAATTG-GAAAA i macFas5.chr2 C 0 I 190 s macNem1.NW_012018021v1 11090230 13 - 17224310 AATAATTG-GAAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402462 13 - 41321030 ATTAATTG-AAAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64476119 13 - 101219884 ATTAATTG-AAAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858409 13 - 924385 ATTAATTG-AAAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6702027 13 - 10587913 ATTAATTG-AAAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024410 14 - 98464013 ATTAATTGAAAAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706935 12 + 27742158 ATTAATTG--AAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244339 13 - 4835464 ATTAATTG-AAAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3702987 13 + 4093027 ATAAATTG-AAAAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11038143 7 + 30473821 ATTAACC------- i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45736770 13 - 149736546 ACTAATAG-AAAAG i mm10.chr6 C 0 C 0 s canFam3.chr20 16583231 13 + 58134056 ATTAACTG-AAAAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768980 13 - 2187301 GTTACCTG-AGACA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1359310 113 - 1467263 I e papAnu3.chr2 59537952 66 + 187378091 I e nasLar1.chr2 57709281 107 + 181502896 I e ponAbe2.chr3 69635687 16 + 202140232 I e rhiBie1.NW_016820128v1 1213812 132 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=16670.000000 s hg38.chrUn_KI270749v1 91581 1 + 158759 A s panTro5.chr3 201978831 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746832 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563331 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046440 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978475 1 - 192460366 a i macFas5.chr2 I 190 C 0 s macNem1.NW_012018021v1 11090243 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402475 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64476132 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858422 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57709388 1 + 181502896 a i nasLar1.chr2 I 107 C 0 s colAng1.NW_012114711v1 6702040 1 - 10587913 a i colAng1.NW_012114711v1 C 0 I 103 s rhiRox1.KN296641v1 1359423 1 - 1467263 a i rhiRox1.KN296641v1 I 113 C 0 s calJac3.chr15 46024424 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706947 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244352 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703000 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11038150 1 + 30473821 a i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45736783 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16583244 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768993 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e micMur3.chr32 1600841 588 - 9149476 I e papAnu3.chr2 59537952 66 + 187378091 I e ponAbe2.chr3 69635687 16 + 202140232 I e rhiBie1.NW_016820128v1 1213812 132 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=4928.000000 s hg38.chrUn_KI270749v1 91582 1 + 158759 A s panTro5.chr3 201978832 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746833 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563332 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046441 1 + 204787373 a i rheMac8.chr2 C 0 I 209 s macFas5.chr2 60978476 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11090244 1 - 17224310 a i macNem1.NW_012018021v1 C 0 I 219 s cerAty1.NW_012009469v1 17402476 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 I 128 s chlSab2.chr22 64476133 1 - 101219884 A i chlSab2.chr22 C 0 I 187 s manLeu1.NW_012098965v1 858423 1 - 924385 a i manLeu1.NW_012098965v1 C 0 I 486 s nasLar1.chr2 57709389 1 + 181502896 t i nasLar1.chr2 C 0 C 0 s rhiRox1.KN296641v1 1359424 1 - 1467263 a i rhiRox1.KN296641v1 C 0 C 0 s otoGar3.GL873534 11038151 1 + 30473821 a i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45736784 1 - 149736546 A i mm10.chr6 C 0 I 1 s canFam3.chr20 16583245 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768994 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e micMur3.chr32 1600841 588 - 9149476 I e papAnu3.chr2 59537952 66 + 187378091 I e ponAbe2.chr3 69635687 16 + 202140232 I e rhiBie1.NW_016820128v1 1213812 132 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e aotNan1.NW_018502033v1 3703001 0 + 4093027 C e cebCap1.NW_016107467v1 244353 0 - 4835464 C e saiBol1.JH378125 27706948 0 + 27742158 C e calJac3.chr15 46024425 0 - 98464013 C e colAng1.NW_012114711v1 6702041 103 - 10587913 I a score=4095.000000 s hg38.chrUn_KI270749v1 91583 1 + 158759 A s panTro5.chr3 201978833 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746834 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563333 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60978477 1 - 192460366 a i macFas5.chr2 C 0 C 0 s papAnu3.chr2 59538018 1 + 187378091 a i papAnu3.chr2 I 66 C 0 s nasLar1.chr2 57709390 1 + 181502896 a i nasLar1.chr2 C 0 C 0 s rhiRox1.KN296641v1 1359425 1 - 1467263 a i rhiRox1.KN296641v1 C 0 C 0 s otoGar3.GL873534 11038152 1 + 30473821 a i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16583246 1 + 58134056 A i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e mm10.chr6 45736785 1 - 149736546 I e micMur3.chr32 1600841 588 - 9149476 I e ponAbe2.chr3 69635687 16 + 202140232 I e rhiBie1.NW_016820128v1 1213812 132 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e manLeu1.NW_012098965v1 858424 486 - 924385 I e macNem1.NW_012018021v1 11090245 219 - 17224310 I e rheMac8.chr2 66046442 209 + 204787373 I e aotNan1.NW_018502033v1 3703001 0 + 4093027 C e cebCap1.NW_016107467v1 244353 0 - 4835464 C e dasNov3.JH563077 1768995 0 - 2187301 C e saiBol1.JH378125 27706948 0 + 27742158 C e calJac3.chr15 46024425 0 - 98464013 C e colAng1.NW_012114711v1 6702041 103 - 10587913 I e chlSab2.chr22 64476134 187 - 101219884 I e cerAty1.NW_012009469v1 17402477 128 - 41321030 I a score=-987.000000 s hg38.chrUn_KI270749v1 91584 1 + 158759 A s panTro5.chr3 201978834 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746835 1 - 205426864 T i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69635703 1 + 202140232 a i ponAbe2.chr3 I 16 I 2616 s nomLeu3.chr21 67563334 1 + 86207423 a i nomLeu3.chr21 C 0 I 8 s macFas5.chr2 60978478 1 - 192460366 a i macFas5.chr2 C 0 C 0 s papAnu3.chr2 59538019 1 + 187378091 a i papAnu3.chr2 C 0 C 0 s nasLar1.chr2 57709391 1 + 181502896 t i nasLar1.chr2 C 0 C 0 s rhiRox1.KN296641v1 1359426 1 - 1467263 t i rhiRox1.KN296641v1 C 0 C 0 s otoGar3.GL873534 11038153 1 + 30473821 a i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16583247 1 + 58134056 A i canFam3.chr20 C 0 I 1 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e mm10.chr6 45736785 1 - 149736546 I e micMur3.chr32 1600841 588 - 9149476 I e rhiBie1.NW_016820128v1 1213812 132 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e manLeu1.NW_012098965v1 858424 486 - 924385 I e macNem1.NW_012018021v1 11090245 219 - 17224310 I e rheMac8.chr2 66046442 209 + 204787373 I e aotNan1.NW_018502033v1 3703001 0 + 4093027 C e cebCap1.NW_016107467v1 244353 0 - 4835464 C e dasNov3.JH563077 1768995 0 - 2187301 C e saiBol1.JH378125 27706948 0 + 27742158 C e calJac3.chr15 46024425 0 - 98464013 C e colAng1.NW_012114711v1 6702041 103 - 10587913 I e chlSab2.chr22 64476134 187 - 101219884 I e cerAty1.NW_012009469v1 17402477 128 - 41321030 I a score=-124.000000 s hg38.chrUn_KI270749v1 91585 2 + 158759 AT s panTro5.chr3 201978835 2 - 202621043 AC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746836 2 - 205426864 AC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563343 2 + 86207423 at i nomLeu3.chr21 I 8 C 0 s macFas5.chr2 60978479 2 - 192460366 at i macFas5.chr2 C 0 C 0 s papAnu3.chr2 59538020 2 + 187378091 tt i papAnu3.chr2 C 0 C 0 s nasLar1.chr2 57709392 2 + 181502896 at i nasLar1.chr2 C 0 C 0 s rhiRox1.KN296641v1 1359427 2 - 1467263 at i rhiRox1.KN296641v1 C 0 C 0 s otoGar3.GL873534 11038154 2 + 30473821 at i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16583249 1 + 58134056 A- i canFam3.chr20 I 1 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e mm10.chr6 45736785 1 - 149736546 I e micMur3.chr32 1600841 588 - 9149476 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213812 132 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e manLeu1.NW_012098965v1 858424 486 - 924385 I e macNem1.NW_012018021v1 11090245 219 - 17224310 I e rheMac8.chr2 66046442 209 + 204787373 I e aotNan1.NW_018502033v1 3703001 0 + 4093027 C e cebCap1.NW_016107467v1 244353 0 - 4835464 C e dasNov3.JH563077 1768995 0 - 2187301 C e saiBol1.JH378125 27706948 0 + 27742158 C e calJac3.chr15 46024425 0 - 98464013 C e colAng1.NW_012114711v1 6702041 103 - 10587913 I e chlSab2.chr22 64476134 187 - 101219884 I e cerAty1.NW_012009469v1 17402477 128 - 41321030 I a score=24539.000000 s hg38.chrUn_KI270749v1 91587 7 + 158759 ATATATA s panTro5.chr3 201978837 7 - 202621043 ATATATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746838 7 - 205426864 ATATATA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563345 7 + 86207423 atatata i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60978481 7 - 192460366 atatata i macFas5.chr2 C 0 C 0 s papAnu3.chr2 59538022 7 + 187378091 acatata i papAnu3.chr2 C 0 C 0 s nasLar1.chr2 57709394 7 + 181502896 aaataca i nasLar1.chr2 C 0 I 8924 s colAng1.NW_012114711v1 6702144 7 - 10587913 atatata i colAng1.NW_012114711v1 I 103 C 0 s rhiRox1.KN296641v1 1359429 7 - 1467263 atatata i rhiRox1.KN296641v1 C 0 C 0 s calJac3.chr15 46024425 5 - 98464013 --CTATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706948 5 + 27742158 --CTATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244353 5 - 4835464 --CTATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703001 5 + 4093027 --CTATA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11038156 5 + 30473821 --atata i otoGar3.GL873534 C 0 I 2 s canFam3.chr20 16583250 2 + 58134056 ----AC- i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e mm10.chr6 45736785 1 - 149736546 I e micMur3.chr32 1600841 588 - 9149476 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213812 132 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e manLeu1.NW_012098965v1 858424 486 - 924385 I e macNem1.NW_012018021v1 11090245 219 - 17224310 I e rheMac8.chr2 66046442 209 + 204787373 I e dasNov3.JH563077 1768995 0 - 2187301 C e chlSab2.chr22 64476134 187 - 101219884 I e cerAty1.NW_012009469v1 17402477 128 - 41321030 I a score=10295.000000 s hg38.chrUn_KI270749v1 91594 2 + 158759 TA s panTro5.chr3 201978844 2 - 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746845 2 - 205426864 TA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563352 2 + 86207423 ta i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60978488 2 - 192460366 tT i macFas5.chr2 C 0 C 0 s papAnu3.chr2 59538029 2 + 187378091 tg i papAnu3.chr2 C 0 C 0 s colAng1.NW_012114711v1 6702151 2 - 10587913 ta i colAng1.NW_012114711v1 C 0 I 4 s rhiRox1.KN296641v1 1359436 2 - 1467263 ta i rhiRox1.KN296641v1 C 0 I 2178 s calJac3.chr15 46024430 2 - 98464013 TA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706953 2 + 27742158 TA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244358 2 - 4835464 TA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703006 2 + 4093027 TA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11038163 2 + 30473821 ta i otoGar3.GL873534 I 2 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e mm10.chr6 45736785 1 - 149736546 I e micMur3.chr32 1600841 588 - 9149476 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213812 132 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e manLeu1.NW_012098965v1 858424 486 - 924385 I e macNem1.NW_012018021v1 11090245 219 - 17224310 I e rheMac8.chr2 66046442 209 + 204787373 I e canFam3.chr20 16583252 0 + 58134056 C e dasNov3.JH563077 1768995 0 - 2187301 C e chlSab2.chr22 64476134 187 - 101219884 I e cerAty1.NW_012009469v1 17402477 128 - 41321030 I a score=6863.000000 s hg38.chrUn_KI270749v1 91596 4 + 158759 CAAT s panTro5.chr3 201978846 4 - 202621043 CAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746847 4 - 205426864 CAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563354 4 + 86207423 tatt i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60978490 1 - 192460366 ---T i macFas5.chr2 C 0 I 2 s papAnu3.chr2 59538031 1 + 187378091 ---t i papAnu3.chr2 C 0 I 2674 s calJac3.chr15 46024432 4 - 98464013 TAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706955 4 + 27742158 TAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244360 4 - 4835464 TAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703008 4 + 4093027 TAAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11038165 3 + 30473821 -aat i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45736786 1 - 149736546 ---T i mm10.chr6 I 1 C 0 s canFam3.chr20 16583252 4 + 58134056 CCAC i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213812 132 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e manLeu1.NW_012098965v1 858424 486 - 924385 I e macNem1.NW_012018021v1 11090245 219 - 17224310 I e rheMac8.chr2 66046442 209 + 204787373 I e dasNov3.JH563077 1768995 0 - 2187301 C e colAng1.NW_012114711v1 6702153 4 - 10587913 I e chlSab2.chr22 64476134 187 - 101219884 I e cerAty1.NW_012009469v1 17402477 128 - 41321030 I a score=12954.000000 s hg38.chrUn_KI270749v1 91600 5 + 158759 GAAAC s panTro5.chr3 201978850 5 - 202621043 AAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746851 5 - 205426864 AAAAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563358 5 + 86207423 aaAAC i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60978493 3 - 192460366 AAA-- i macFas5.chr2 I 2 C 0 s colAng1.NW_012114711v1 6702157 3 - 10587913 AAA-- i colAng1.NW_012114711v1 I 4 I 2 s calJac3.chr15 46024436 5 - 98464013 AAAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706959 5 + 27742158 AAAAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244364 5 - 4835464 AAAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703012 5 + 4093027 AAAAC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11038168 5 + 30473821 aaaaC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45736787 5 - 149736546 AAAAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16583256 5 + 58134056 TAAAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768995 1 - 2187301 ----T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213812 132 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I e manLeu1.NW_012098965v1 858424 486 - 924385 I e macNem1.NW_012018021v1 11090245 219 - 17224310 I e rheMac8.chr2 66046442 209 + 204787373 I e chlSab2.chr22 64476134 187 - 101219884 I e cerAty1.NW_012009469v1 17402477 128 - 41321030 I a score=53814.000000 s hg38.chrUn_KI270749v1 91605 5 + 158759 AAAAC s panTro5.chr3 201978855 5 - 202621043 AAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746856 5 - 205426864 AAAAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563363 5 + 86207423 AAAAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046651 5 + 204787373 AAAAG i rheMac8.chr2 I 209 C 0 s macFas5.chr2 60978496 5 - 192460366 AAAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11090464 5 - 17224310 AAAAG i macNem1.NW_012018021v1 I 219 C 0 s cerAty1.NW_012009469v1 17402605 5 - 41321030 AAAAG i cerAty1.NW_012009469v1 I 128 C 0 s chlSab2.chr22 64476321 5 - 101219884 AAAAG i chlSab2.chr22 I 187 C 0 s colAng1.NW_012114711v1 6702162 5 - 10587913 AAAAG i colAng1.NW_012114711v1 I 2 C 0 s rhiBie1.NW_016820128v1 1213944 5 - 2311269 AAAAG i rhiBie1.NW_016820128v1 I 132 I 2802 s calJac3.chr15 46024441 5 - 98464013 CAAAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706964 5 + 27742158 AAAAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244369 5 - 4835464 AAAAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703017 5 + 4093027 AAAAG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11038173 5 + 30473821 AAAAC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45736792 4 - 149736546 -AAAT i mm10.chr6 C 0 I 1 s canFam3.chr20 16583261 5 + 58134056 AAAAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1768996 5 - 2187301 AAAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e tarSyr2.KE939134v1 136237 602 + 958716 I e manLeu1.NW_012098965v1 858424 486 - 924385 I a score=442736.000000 s hg38.chrUn_KI270749v1 91610 53 + 158759 AGGAGTGACCAGGTACACATCCTATGTTGGCAGAA------CAGGTGAAAG-TGGTTTGG s panTro5.chr3 201978860 53 - 202621043 AGGAGTGACCAGGTACACATCCTATGTTGGTAGAA------CAGGTGAACG-TGGTTTGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746861 53 - 205426864 AGGAGTGACCAGGTACACATCCTATGTTGGTAGAA------CAGGTGAACG-TGGTTTGG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563368 53 + 86207423 AGGAGTGAGCAGGTATACATCCTACATTGGTAGAA------GAGGTCAAAG-TGGTTTGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046656 53 + 204787373 AGGACTGACCAGCTACCCATCCGACGTTGGTAGAA------CAGGTCAAAG-TGGTTTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978501 53 - 192460366 AGGACTGACCAGCTACCCATCCGACGTTGGTAGCA------CAGGTCAAAG-TGGTTTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11090469 53 - 17224310 AGGACTGACCAGCTACCCATCCGACGTTGGTAGAA------CAGGTCAAAG-TGGTTTGG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402610 53 - 41321030 AGGACTGACCAGCTACCCATCCGACGTTGGTAGAA------CAGGTCAAAG-TGGTTTGG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64476326 53 - 101219884 AGGACTGACCAACTACCCATCCAACGTTGGTAGAA------CAGGTCAAAG-TGGTTTGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858910 53 - 924385 AGGACTGACCAGCTACCCATCCGACGTTGGTAGAA------CAGGTCAAAG-TGGTTTGG i manLeu1.NW_012098965v1 I 486 C 0 s colAng1.NW_012114711v1 6702167 53 - 10587913 AGGACTGACCAGCTACACATCCGACATTGGTAGAA------CAGGTCAAAG-TGGTTTGG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024446 50 - 98464013 AGAAGTGACCAG---CAAATCCTACACTGGTAGAA------CAGGTTAAAG-TGGTTTGG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27706969 50 + 27742158 AGAAGTGACCAA---CACATCCTACACTGGTAGAA------CAAGTTAAAG-TGGTTTGG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244374 50 - 4835464 AGAAGTGACCAA---CACATCCTACATTGGTAGAA------CACGTTAAAG-TGGTTTGG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703022 50 + 4093027 AGAAGTGACCAG---CATATCCTACATTGGTAGAA------CAGGTTAAAG-TGGTTTGG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11038178 51 + 30473821 AGAAATAACCACATACACATCATACATTGGT-GAA------TGGTTCAAAA--AAATTGG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45736797 60 - 149736546 AGAAATGATCTTAGGAGCAGTCTACATTGAAAAAACTTTTCCAAATAAAAGATAATTTAG i mm10.chr6 I 1 C 0 s canFam3.chr20 16583266 53 + 58134056 ATAAGTGACTATTTATACATCCTGCATTAGTGGAA------CATATCAAAA-TGGTTCTG i canFam3.chr20 C 0 I 498 s dasNov3.JH563077 1769001 40 - 2187301 AGAAGTGACC-----TTCACT--------GTGAAT------CAGGTCATAA-TGCTTACA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=649400.000000 s hg38.chrUn_KI270749v1 91663 68 + 158759 TGTATTTCAAtt----------ttaccaaaatgggaacaggctgactatattattttctatt--------tttttt-tctacttaat s panTro5.chr3 201978913 67 - 202621043 TGTATTTCAAtt----------ttaccaaaatgggaacaggctgactatattattttctatt--------tttttt--ctacttaat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746914 67 - 205426864 TGTATTTCAAtt----------ttaccaaaatgggaacaggctgactatattattttctatt--------tttttt--ctacttaat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563421 68 + 86207423 TGTATTTCAAtt----------ttaccaaaatgggaacaggctgactatattattttctatg--------tttttt-tctacttaat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046709 68 + 204787373 TGTTTTTCAAtt----------ttaccaaaatgggaacaggctgactatattattttctatg--------cttttt-tctacttaat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978554 68 - 192460366 TGTTTTTCAAtt----------ttaccaaaatgggaacaggctgactatattattttctatg--------cttttt-tctacttaat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11090522 68 - 17224310 TGTTTTTCAAtt----------ttaccaaaatgggaacaggctgactatattattttctatg--------tttttt-tctacttaat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402663 68 - 41321030 TGTTTTTCAAtt----------ttaccaaaatgggaacaggctgactatattattttctatg--------tttttt-tctacttaat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64476379 68 - 101219884 TGTATTTCAAtt----------ttaccaaaatgggaaaaggctgactatattattttctatg--------tttttt-tctacttaat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 858963 68 - 924385 TGTTTTTCAAtt----------ttaccaaaatgggagcaggctgactatattattttctatg--------tttttt-tctacttaat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6702220 68 - 10587913 tgtatttgaatt----------ttacaaaaatgggaacaggctgactatattattttctatg--------tttttt-tctacttact i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024496 68 - 98464013 TGTATTTCAAtt----------ttaccaaaattggaacacactgactatattattttctttg--------tttttt-tccacttaat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27707019 74 + 27742158 TGTATTTCAAtt----------ttaccaaaatgggaacacgctgactatattattttctttgtgttt--ttttttt-tccacttaat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244424 76 - 4835464 TGTATTTCAATT----------TTACCAAAATGGGAACACGCTGACTGTAttattttctttgttttttgttttttt-tCCACTTAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703072 75 + 4093027 TGTATTTCAATT----------TTACCAAAATGGGAATACGCTGACTATAttattttctttgtttttt-ttttttt-tCCACTTAAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11038229 68 + 30473821 TATATTTAAATT----------TCACAAAAATGGGAGCATATTAACTATAATATTTTCTACC--------TTTTCT-CCCACTGAAC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45736857 19 - 149736546 TGCATTTAAATT---------------------------------CTATATC----------------------------------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16583817 81 + 58134056 tatctttcaattaaaaaaAAAATCACCAAGATGGAAACA--CTGATTATACTATTTTTTATATTCTT---TTTTTT-TCCACTTAAT i canFam3.chr20 I 498 C 0 s dasNov3.JH563077 1769041 68 - 2187301 TTTATTTAAATT----------TCCCCAA-ATGTAAAGATGTACACTATAATATTTTCTACC--------TTTTTTGTTCACTTAAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 573011 285 + 2414909 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=915435.000000 s hg38.chrUn_KI270749v1 91731 87 + 158759 acatcatgagcatcttcccatgtcTGTGTCTATT-ATGGTGTGCTCA-TTTTTAAGGGCAAGGAACTTC-TTTTTGGTCCAAGCTTC-TTT s panTro5.chr3 201978980 84 - 202621043 acatcatgagcatcttcccatgtcTGTGTCTATT-ATGGTATGCTCA-TTTTTAAGGGCAAGGAACTTC-TTTTTGGTCCAGGCTT----T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204746981 84 - 205426864 acatcatgagcatcttcccatgtcTGTGTCTATT-ATGGTATGCTCA-TTTTTAAGGGCAAGGAACTTC-TTTTTGGTCCAGGCTT----T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563489 87 + 86207423 acatcatgagcatcttcccatgtcTGTGTCTACT-ATGGTATGCTCA-TTTTTAACGGCAAGGAACTTC-TTTTTGGTCCAGGCTTC-TTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046777 87 + 204787373 acatcatgagcatcttcccatgtcTGTGTCTATC-ATGGTATGGTCA-TTTTTAATGGCAAGGAACTTC-TTTTTAGTCCAGGCTTC-TTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978622 87 - 192460366 acatcatgagcatcttcccatgtcTGTGTCTATC-ATGGTATGGTCA-TTTTTAATGGCAAGGAACTTC-TTTTTAGTCCAGGCTTC-TTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11090590 87 - 17224310 acatcatgagcatcttcccatgtcTGTGTCTATC-ATGGTATGGTCA-TTTTTAATGGCAAGGAACTTC-TTTTTAGTCCACGCTTC-TTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402731 87 - 41321030 acatcatgagcatcttcccatgtcTGTGTCTATC-ATGGTATGGTCA-TTTTTAATGGCAAGGAACTTC-TTTTTAGTCCAGGCTTC-TTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64476447 86 - 101219884 acatcatgagcatcttcccatgtcTGTGTCTATC-ATGGTATGGTCA--TTTTAATGGCAAGGAACTTC-TTTTTAGTCCAGGCTTC-TCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 859031 87 - 924385 acatcatgaacatcttcccatgtcTGTGTCTATC-ATGGTATGGTCA-TTTTTAATGGCAAGGAACTTG-TTTTTAGTCCAGGCTTC-TTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6702288 86 - 10587913 acatcatgagcatcttcccatgtcTGTATCTATC-ATGGTATGGTCA-TTTTTAATGGCAAGGAACTTC--TTTTAGTCCAGGCTTC-TTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024564 89 - 98464013 acattatgagcatcttcccacatctgcatctattcatgatatggtca-tttttaatgTCAAGGAACTTC-TTTTTAATAAAGGCATCTTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27707093 89 + 27742158 acattatgagcatcttcccacatctgcatctattcatgatatggtca-tttttaatggcAAGGAACTTC-TTTTTAATACAGGCTTCTTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244500 89 - 4835464 ACATTATGAGCATCTTCCCACACCTGCATCTATTGATGATATGGTCA-TTTTTAGTGTCAAGGAACTTC-TTTTTCATACAGGCTTCTTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703147 89 + 4093027 ACATTATGAGCATCTTCCCACATCTGCATCTATTCATGATATGGTCA-TTTTTAATGGCAAGGAACTTC-TTTTTAATATAGGCTTCTTTT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 573296 88 + 2414909 ACATCATGAGCATCTTCCCCTGTCTCCATCTTTTCATAGCATGCTCA-TTTTTAATGGCAAGAAACTTC-TTTTTAGTCCAGGCTCC-TTT i proCoq1.NW_012148064v1 I 285 I 1 s otoGar3.GL873534 11038297 72 + 30473821 ACATCAGGAGCATCTTTGCATATCTCTATCCTTTCACAGCAC------------------AGAAACTACTTTTTTAGTCCAGGCTCC-TTT i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45736876 49 - 149736546 --------------------------TATCTATA--------------TATTTAATGGTGAGTAACTTA-TTTATAAACCAGATTTC-ATT i mm10.chr6 C 0 C 0 s canFam3.chr20 16583898 88 + 58134056 ACATCATCAGCAT-TTTCTATGTCTCTATCCTTT-CACACATACTCATTTTTTAATGACAAGGAACTTTTTTTTTAGTCCAGATTTC-CTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1769109 87 - 2187301 ACATCATGAGCATGTTCCCATCTCTCTATCTTTT-CACACATACTCA-TTTTTGATGACAAGGAACATC-TTTTTAGTTCAGGCTTC-TTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 136237 602 + 958716 I a score=12521.000000 s hg38.chrUn_KI270749v1 91818 1 + 158759 T s panTro5.chr3 201979064 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204747065 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563576 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046864 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978709 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11090677 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402818 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64476533 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 859118 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6702374 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024653 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27707182 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244589 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703236 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 136839 1 + 958716 C i tarSyr2.KE939134v1 I 602 I 475 s proCoq1.NW_012148064v1 573385 1 + 2414909 A i proCoq1.NW_012148064v1 I 1 C 0 s otoGar3.GL873534 11038370 1 + 30473821 T i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45736925 1 - 149736546 T i mm10.chr6 C 0 C 0 s canFam3.chr20 16583986 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1769196 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I a score=403387.000000 s hg38.chrUn_KI270749v1 91819 37 + 158759 -TCTTCTAAAGTTCAATATTATGCTGCCATTCCACCAA s panTro5.chr3 201979065 36 - 202621043 -TCTTCTGAAGTTCAATATTA-GCTGTCATTCCACCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204747066 37 - 205426864 -TCTTCTGAAGTTCAATATTATGCTGCCATTCCACCAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563577 37 + 86207423 -TCTTCTAAAGTTCAATATTATGCTGCCATTCCATCAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046865 37 + 204787373 -TCTTCTAAAGTTCAATATTATGCTGCCGTTACATCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978710 37 - 192460366 -TCTTCTAAAGTTCAATATTATGCTGCCGTTACATCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11090678 37 - 17224310 -TCTTCTAAAGTTCAATATTATGCTGCCGTTACATCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402819 37 - 41321030 -TCTTCTAAAGTTCAATATTATGCTGCCATTACATCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64476534 37 - 101219884 -TCTTCTAAAGTTCAATATTATGCTGCCATTACATCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 859119 37 - 924385 -TCTTCTAAAGTTCAATATTATGCTGCCATTACATCAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6702375 37 - 10587913 -TCTTCTAAAGTTCAATATTATGCTACCATTACATCAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024654 37 - 98464013 -TCTTCTAAAGTTCAGTATTATGCTGCCATTCCATCAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27707183 37 + 27742158 -TCTTCTAAAGTTCAATATTATGCTGCCATTCCATCAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244590 37 - 4835464 -TCTTCTGAAGTTCAATATTAGGCTGCCATTCCATCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703237 36 + 4093027 -TCTT-TAAAGCTCAAAATTATGCTGCCATTCCATCAA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 573386 37 + 2414909 -CCTTCTAAAGCTTAATACTGTGCTGCCATACCATCCA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11038371 26 + 30473821 -CCTTTGAAAGCTTAATTTTGTGCTGC----------- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45736926 28 - 149736546 -----TCAAAG---AATTTTAAATTG--ATAGCATTGA i mm10.chr6 C 0 C 0 s canFam3.chr20 16583987 37 + 58134056 -TCCTCTAAACCTTAATATGGTGCTGCCATACCATCCA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1769197 38 - 2187301 TCCTTCTAAACCTTAATAATGTGCTACCATACCATCCA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e micMur3.chr32 1600841 588 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 136840 475 + 958716 I a score=6703364.000000 s hg38.chrUn_KI270749v1 91856 433 + 158759 GGCTTTATGG-AAGATAATTTCCGTTAATTTGACAGGTCATTGTCTTGTCAGTTTCAGATAATTAAGGATAAGCCATTAGTTCCTGTACCTATTGTGTAATCTCTTTTGTCTCATCAGG-TTTGTGAATTTTGCAGTGCTTGCCAATCTACAGTTAGCTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTTGGTGT-----------------GTTCTCTTTc---------tctttctctaaaggattccattttccaaaacaccataagcaaataaattggcatgtggaactttctgcagccatataatagtcaaacacactt-aaccgtgtatatttagctcccagcaaaattgtctaattttgcatttgctagctagccagtaaactccaggt-------------------------------------------------------------ttcttgcatcagagggggatgctaacccacagattttacagttcagaagt-----------attattagtaaataccctca s panTro5.chr3 201979101 432 - 202621043 GGCTTTATGG-AAGATAATTTCCATTAATTTGACAGGTCATTGTCTTGTCAGTTTCAGATAATTAAGGACTAGCCATTAGTTCCTGTACCTATTGTGTAATCTCTTTTGTCTCATCAGG-TTTGTGAATTTTGCAGTGCTTGCCAATCTACAGTTAGCTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTTGGTGT-----------------GTTCTctttc----------ctttctctaaaggattccattttccaaaacaccataagcaaataaattggcatgtggaactttctgcagccatataatagtcaaacacactt-aaccgtgtatatttagctcccagcaaaattgtctaattttgcatttgctagctagccagtaaactccaggt-------------------------------------------------------------ttcttgcatcagagggggatgctaacccacagattttacagttcagaagt-----------attattagtaaataccctca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204747103 431 - 205426864 GGCTTTATGG-AAGATAATTTCCATTAATTTGACAGGTCATTGTCTTGTCAGTTTCAGATAATTAAGGACTAGCCATTAGTTCCTGTACCTATTGTGTAATCTCTTTTGTCTCATCAGG-TTTGTGAATTTTGCAGTGCTTGCCAATCTACAGTTAGCTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTTGGTGT-----------------GTTCTctttc----------ctttctctaaaggattccattttccaaaacaccataagcaaataaattggcatgtggaactttctgcagccatataatagtcaaacacactt-aaccgtgtatatttagctcccagcaaaattgtctaattttgcatttgctagctagccagtaaactccagg--------------------------------------------------------------ttcttgcatcagagggggatgctaacccacagattttacagttcagaagt-----------attattagtaaataccctca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67563614 433 + 86207423 GGCTTTATGG-AAGATAATTTCCATTAATTTGACACGTCATTGTCTTGTCAGTTTCAGATAATTAAGGACTAGCCATTAGTTCCTGTACCTATTGTGTAATCTCTTTTGTCTCATCAGG-TTTGTGAATTTTGCAGTGCTTGCCAATCTACAGTTAGCTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTTGGTGT-----------------GTTCTCTTTC---------TCTTTCTCTAAAGGATTCCATTTTCCAAAACACCATAAGCAAATAAATTGGCATGTGGAACTTTCTGCAGCCACATAATAGTGAAACACACTT-AACCGTGTATATTTAGCTCCCAGCAAAATTGTCTAATTTTGCATTTGCTAGCTAGCCAGTAAACTCCAGGT-------------------------------------------------------------TTCTTGCATCAGAGGGGGATGCTCACCCACAGATTTTACAGTTCAGAAGT-----------ATTGTTAGTATATACCCTCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66046902 438 + 204787373 GGCTTTATGG-AAGATAATTTCCATTAATTTGACAGATCATTGTCTTGTCAGCTTCGGATAATTAAGGACTAGCCATTAGTCCCTGTACCTATTGTGTAATCTCTTTTGCCTCATCAGG-TTTGTGAATTTTGCAGTGCTTGCCAATCTACAGTTAGCTTAATTAAAATCAATGGAG-----------------------TCGAAA-------GTTGGTGT-----------------GTTCTCTTTc---------tctttctctgaaggattccattttccaaaacaccataagcaaataaattggcatgtggaactttcttcagccgtatagtagtcaaacacactt-aaccgtgtatatttaactcccagcaaaattatcccattttgcatttgctagctagccagtaaactccagtt-------------------------------------------------------------ttcttgcatcagaggaggatgctcacccatagattttacag-tcagaagt-----agtccaattgctagtaaataccctca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60978747 438 - 192460366 GGCTTTATGG-AAGATAATTTCCATTAATTTGACAGATCATTGTCTTGTCAGCTTCGGATAATTAAGGACTAGCCATTAGTCCCTGTACCTATTGTGTAATCTCTTTTGCCTCATCAGG-TTTGTGAATTTTGCAGTGCTTGCCAATCTACAGTTAGCTTAATTAAAAACAATGGAG-----------------------TCGAAA-------GTTGGTGT-----------------GTTCTCTTTc---------tctttctctaaaggattccattttccaaaacaccataagcaaataaattggcatgtggaactttcttcagccgtatagtagtcaaacacactt-aaccgtgtatatttaactcccagcaaaattatcccattttgcatttgctagctagccagtaaactccagtt-------------------------------------------------------------ttcttgcatcagaggaggatgctcacccatagattttacag-tcagaagt-----agtccaattgctagtaaataccctca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11090715 438 - 17224310 GGCTTTATGG-AAGATAATTTCCATTAATTTGACAGGTCATTGTCTTGTCAGCTTCGGATAATTAAGGACTAGCCATTAGTCCTTGTACCTATTGTGTAATCTCTTTTGCCTCATCAGG-TTTGTGAATTTTGCAGTGCTTGCCAATCTACAGTTAGCTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTTGGTGT-----------------GTTCTCTTTc---------tctttctctaaaggattccattttccaaaacaccataagcaaataaattggcatgtggaactttcttcagccatatagtagtcaaacacactt-aaccgtgtatatttaactcccagcaaaattatcccattttgcatttgctagctagccagtaaactccagtt-------------------------------------------------------------ttcttgcatcagaggaggatgctcacccacagattttacag-tcagaagt-----agtccgattgctagtaaataccctca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17402856 438 - 41321030 GGCTTTATGG-AAGATAATTTCCATTAATTTGACAGGTCATTGTCTTGTCAGCTTCGGATAATTAAGGACTAGCCATTAGTCCCTGTACCTATTGTGTAATCTCTTTTGCCTCATCAGG-TTTGTGAATTTTGCAGTGCTTGCCAATCTACAGTTAGCTTAATTAAAATCAATGGAG-----------------------TCGAAA-------GTTGGTGT-----------------GTTCTCTTTc---------tctttctctaaaggattccattttccaaaacaccataagcaaataaattggcatgtggaactttcttcagccatatagtagtcaaacacactt-aaccgtgtatatttaactcccagcaaaattatctcattttgcatttgctagctagccagtaaactccagtt-------------------------------------------------------------ttcttgcatcagaggaggatgctcacccacagattttagag-tcagaagt-----agtccaattgctagtaagtaccctca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64476571 438 - 101219884 GGCTTTATGG-AAGATAATTTCCATTTATTTGACAGGTCATTGTCTTGTCAGCTTTGGATAATTAAGGACTAGCCATTAGTCCCTGTACCTATTGTATAATCTCTTTTGCCTCATCAGG-TTTGTGAATTTTGCAGTGCTTGCCAATCTACAGTTAGCTTAATTAAAATCAATGGAG-----------------------TCGAAA-------GTTGGTGT-----------------GTTCTCTTTc---------tctttctctaaaggattccgttttccaaaacaccataagcaaataaattggcatgtggaactttcttcagccatatagtagtcaaacacactt-aaccatgtatatttaactcccagcaaaattatctcattttgcatttgctagctagccagtaaactccagtt-------------------------------------------------------------ttcttgcatcagaggaggatgctcacccacagattttacag-tcagaagt-----agtccaattgctagtaaataccctca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 859156 438 - 924385 GGCTTTATGG-AAGATAATTTCCATTAATTTGACAGGTCATTGTCTTGTCAGCTTTGGATAATTAAGGACTAGCCATTAGTCCCTGTACCTATTGTGTAATCTCTTTTGCCTCATCAGG-TTTGTGAATTTTGCAGTGCTTGCCAATCTACAGTTAGCTTAATTAAAATCAATGGAG-----------------------TCGAAA-------GTTGGTGT-----------------GTTCTCTTTc---------tctttctctaaaggattccattttccaaaacaccataagcaaataaattggcatgtggaactttcttcagccatgtagtagtcaaacacactt-aaccgtgtatatttaactcccagcaaaattatctcattttgcatttgctagctagccagtaaactccagtt-------------------------------------------------------------ttcttgcatcagaggaggatgctcacccacagattttagag-tcagaagt-----agcccaattgctagtaaataccctca i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6702412 438 - 10587913 GGCTTTATGG-AAGATAATTTCCATTAATTTGACAGGTCATTGTCTTGTCAGCTTCAGATAATTAAGGACTAGCCATTAGTCCCTGTACCTATTGTGTAATCTCTTTTGCCTCATCAGG-TTTGTGAATTTTGCAGTGCTTGCCAATCTACAGTTAGCTTAATTAAAATCAATGGAG-----------------------TCGAAA-------GTTGGTGT-----------------GTTCTCTTTC---------CCtttctctaaaggattccgttttccaaaacaccgtaagcaaataaattggcatgtggaactttctgcagccatatagtagtcaaacacactt-gaccgtgtatatttaactcccagcaaaattgtctcattttgcatttgctagctagccagtaaactccagtt-------------------------------------------------------------ttcttgcatcagagggggatgctcacccacagattttacag-tcagaagt-----agtccaattgctagtaaataccctca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46024691 437 - 98464013 GGCTTTACAG-AAAATTATTTCCATTCATTTGACACGTCATTGTCTTGTCAGTTTCAGATAATTAAGGGCTAGCCATTGGTCCCTGGACCTATTGTGTAATCTCTTTTGTCTAGTCAGG-TTTGTGCATTTTGCAGTGCATGCTGATTTACAGTTAGTTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTCAGTGT-----------------GTTCTCTTTC---------TCTTTCTCTAAAGGATTCCATTTTCCAAAACACCGTAAGCAAATAAATTGGCATGTGGAACTTTCTGCAGCCGTATAATAGTCAAACACAATT-AAATG-GTATATTTAGCTCCCAGCAAAATTGCCTAATTTTGCATTTGCTAGCTAGCAAGTAAACTCCAGTT-------------------------------------------------------------TTCTTGCATCAGAGGGAGATGCTCACCCACAGATTTTGCAC-TCAGAAGT-----AGTCCAATTACGAGTAAATACCCTCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27707220 437 + 27742158 GGCTTTACGG-AAAATGATTTCCATTCATTTGACAGGTCATTGTCTTGTCAATTTCAGATAATTAAGGGCTAGCCATTGGTCCCTGTACCTATTGTGTAATCTCTTTTGTCTAGTCAGG-TTTGTGCATTTTGCAGTGCATGCCAATCTACAGTTAGTTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTCAGTGT-----------------GCTCTCTTTC---------CCTTCCTCTAAAGGATTCCATTTTCCAAAACACCATAAGCAAATAAATTGGCATGTGGAACTTTCTGCAGCCGTATAATAGTCAAACACACTT-AAATG-GTATATTTAGCTCCCAGCAAAATTGCCTAATTTTGCATTTGCTAGCTAGCAAATAAACTCCAGTT-------------------------------------------------------------TTCTTGCATCAGAGGGGGATGCTCACCCACAGATTTTGTAC-TCAGAAGT-----AGTCCCATTACTAGTAAATACCCTCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 244627 437 - 4835464 GGCTTTACGG-AAAATGATTCCCATTCATTTGACAGGTCATTGTCTTGTCAGTTTCAGATAATTAAGGGCTAGCCATTGGTCCCTGGACCTATTGTGTAACCTCTTTTGCCTAGTCAGG-TTTGTGCATTTTGCAGTGCATGCCAATCTACAGTTAGTTTAATTAAAATCAATGGAG-----------------------TTGGAA-------GTCAGTGT-----------------GTTCTCTTTc---------tctttctctaaagaatctcattttccaaaacaccgtaagcaaataaattggcatgtggaactttctgcagccgtataatagtcaaacatactt-aaatg-gtatatttagctcccagcaaaattgcctaattttgcatttgctagctagcaagtaaactccagtt-------------------------------------------------------------ttcttgcatcagagggggatgctcacccacagattctgcac-tcagaagt-----agtccaattactagtaaataccctca i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703273 438 + 4093027 GGCTTTATGG-AAAATGATTTCCATTCATTTGACAGGTCATTGTCTTGTCAGTTTCAGATAATTAAGGGCTAGCCATTGGTCCTTGGACCTATTGTGTAATCCCTTTTGTCTAGTCAGGATTTGTGCATTTTGCAGTGCATGCCAATCTACAGTTAGTTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTCAGTGT-----------------GTTCTCTTTc---------tctttctctaaaggattccattttccaaaacaccataagcaaataaattggcatgtggaactttctgcagccgtataatagtcaaacacactt-aaatg-gtatatttagctcccagcaaaattgcctaattttgcatttgctagctagcaagtaaactccagtt-------------------------------------------------------------ttcttgcctcagagggggatgctcacccacagattttgtac-ttagaagt-----agtccaattactagtaaataccctca i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1601429 439 - 9149476 GGCTTTATGG-AAAATAATTTCCATTAACGTGACAGGTCATTGTCTTGTCGGTTACAGATAATTAAGGACTAGCCATTGGTCCCTGTACCTATTGTGTTATCTCTTTTGTCTCATTGGG-TGCATGAATTTTGCAGCGCTTGCCAGCCTATGGTTGGCTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTCTGTGT-----------------GTTCTCTTTc---------tctctctctaaaggattccattttcctaaacaccataagcaaataaactggcatgtggaactttctgcagctgtataatagtcacacacacttaaaccgtatatatttagctcccagcaaaattgcctaattttacatttgctagctagccagtaaactccaggt-------------------------------------------------------------ttcttccattggagggggatgctcacccacagattttacac-ttaaaagt-----agtccaattactagtaaatatcctca i micMur3.chr32 I 588 C 0 s proCoq1.NW_012148064v1 573423 438 + 2414909 GGCTTTATGG-AAAATAATTTCCATTAACGTGACAGGTCATTGTCTTGTCAGTTACAGATAATTAAGGACTAGCCATTAGTCCCTGTACCTATTGTGTTATCTCTTTTGTCTCATTGGG-TGCATGAATTTTGCAGCGCTTGCCAGTCTATGGTTAGCTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTCTGTGT-----------------GTTCTCTTTc---------tctctctctaaaggattccgttttccaaaacaccataagcaaataaactggcatgtggaactttctgcagctgtataataatcacatacactt-aaccgtatatatttagctcccagcaaaattgactaattttacatttgctagctagccagtaaactccaagt-------------------------------------------------------------ttcttccattggagggggatgctcacccacagattttacac-ttaaaagt-----agtcccattgctagtaaatatcctca i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11038397 435 + 30473821 ---TTTATGG-AAAATAAGTTCCATTAACTTGACAGGTCATTGTCTTGTTGGTTTCAGATAATTAAGGACCAGCCATTGGTCCCTGTACCCATTGTGTTATCTCTTCTGTCTCACTGGG-TTCCTGGATTCTGCAGTGCTTGCCAGTCTATGGTTAGCTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTCTGTGC-----------------GTTCTCTTTC---------TCTCTCTCTAAAGGATTCCATTTTCCAAAACACCGTAAGCAAATAAACTGGCGTGTGGAACTTTCTGCAGCTGTATAGTAGTCACACACATTT-AACAGTATATATTTAGCTCCCAGCAAAATTGCCTAATTTTACATTTGCTAGCTAGCCAGTAAATTCCAGGT-------------------------------------------------------------TTCTTCCATTGGAGGGGGATGCTCATCCACAGACTTTGTAC-TTAGAAGA-----AGTCTAATTACTAGTAAATACCTTCA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45736954 516 - 149736546 AGCATTATGGAAAAATAATTTGTATTAACCTGACAG------GCCTTGTCAATTTCAGGTAATGAAATACCAGACATTGGTTTCTGGCCCTACTTTATAATGGCTTTTATCTCATCAGG-GTCAAGAATT-TGCAGTGTTTGCCAGTCTATGGTTAGCTTAATTAAAATCAATGATG-----------------------CAAAAA-------GCCACCCCTCCTTACTCTCTCCCTGGCTCCCTTCCACTCTCCCATCTTTTCCTCTTGGATTCCA-TTTCCAACCCCCCATACGCAAATGCACATGCATGTCAAAGATTCT------GTATAATAGTGACATTCACTT-AACTGTATATCTTTAGCTCCCAGCTAAATTGGTTAATTTTGCATTTGCCAGATAACTGAGATATCCAGGATTTTGTTTCATTTTTGTTTTGTTTTTTGAGGATTTTTTTTTTCTTGGGGGGGTGAGGGGAGATTTTTGTATTGGAAGGTGATGTTCTCCCACAGATATTACA--CAAGAAGCAGTCGAGTCCAATTACAACTGAATATCCACA i mm10.chr6 C 0 C 0 s canFam3.chr20 16584024 438 + 58134056 GGCTTCATAA-AAAATAATTTCCATTAACTTGACAGGTCATTGTCTTATCAATTTCAGGTAATTAAGGACTAACCATTGGTCTCTGTATCTCTTGTGTCATCTCTTTTGTCTCATCCAA-TTCATGAATTTTGCAGTGTTTGCCAGACTATGGTAGGCTTAATTAAAATCAATGGAG-----------------------TTGAAA-------GTCTGTGC-----------------TTTCTCTTTC---------TCTCTCTCTAAAGGATTCCATTTTCCAAAACACCATAAGCAAATAAACTGGCATGTGGATCTTTCTGTAGCTGTGTAATAGTCACCCACACTT-AACTGTATATATTTAGCTGCCAGCAAAATTGCCTAATTTTGCATTTGCTAGCTAGCCAGCAAACTCCAGGT-------------------------------------------------------------TTTTTCCATCAGAGGAGGAAGCTCACCCACGGATTTTGCAC-ATAGAAGT-----AGTCCAATTACTAGGAACTACCCTCA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1769235 455 - 2187301 GGATTTATGG-GAAATAACTTAAACAAACTTGACAGGTCACTGTCTTGTCACTTTCAGATAATTAAGGATTAGCCATTGGTCCCTGTACCTATTGTGCAATTACTTTGGTCTCATT-GG-TTCATGAACGTTGCCATTTTTGCCA-----------GCTTATTTAAAATCAATGGAAAGAAAGAAAAAAAAGAGTTAAATTTAAAAAAGAAATATCTTTGT-----------------GTTCTCTTTC---------TCTCTCTCTGAAGGATTCCATTTTCCAAAACACCATAAGCAATTAAACTGGCATGCGGAACTTT-TATAGTTGTATAATACTCACACATACTT-AACCGTATATATTTAGCTCCCAGCAAAATGGCCTGATTTTGTATTTGCTAGCTAGCCAGCAAACTCCAGGT-------------------------------------------------------------TTCCGTCATTAGAGGGGAATGCTCACCCACGGATTTTGCAC-TTAGAATT-----GGTCCAATTCCTAGTAACTATCCTCC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 136840 475 + 958716 I a score=44121.000000 s hg38.chrUn_KI270749v1 92289 2 + 158759 ac s panTro5.chr3 201979533 2 - 202621043 ac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204747534 2 - 205426864 ac i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564047 2 + 86207423 AC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66047340 2 + 204787373 ac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979185 2 - 192460366 ac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091153 2 - 17224310 ac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17403294 2 - 41321030 ac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477009 2 - 101219884 ac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 859594 2 - 924385 ac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6702850 2 - 10587913 ac i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025128 2 - 98464013 AC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27707657 2 + 27742158 AC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245064 2 - 4835464 ac i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703711 2 + 4093027 ac i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 137315 2 + 958716 ac i tarSyr2.KE939134v1 I 475 I 11259 s micMur3.chr32 1601868 2 - 9149476 ac i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 573861 2 + 2414909 ac i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11038832 2 + 30473821 AC i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45737470 2 - 149736546 AC i mm10.chr6 C 0 C 0 s canFam3.chr20 16584462 2 + 58134056 AC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1769690 2 - 2187301 AC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I a score=3559017.000000 s hg38.chrUn_KI270749v1 92291 245 + 158759 aaaaggctcagaaagtgaaatcagttccaatgctatcatctt-tcctcaagctgagctacagtgttcaattctccaAATGTGAGGTAGCTGGCAAA------GACGTTG---CT------GTTGTTTTCTGGATTTAAGCTGGGAAGATAGTAACTGGAGCCTAGGAGAAGAATTTTC-----------AACTAATGAAGTGTT--GTTA--ATATAAGACTTTCAAAAATACTAATCACAACATTTCTGTAATTTGCAACTAGCATCAATTGA-TA s panTro5.chr3 201979535 245 - 202621043 aaaaggctcagaaagtgaaatcagttccaatgctatcatctt-tcctcaagctgagctacggtgttcaattctccaAATGTGAGGTAGCTGGCAAA------GACGTTG---CT------GTTGTTTTCTGGATTTAAGCTGGGAAGATAGTAACTGGAGCCTAGGAGAAGAATTTTC-----------AACTAACGAAGTGTT--GTTA--ATATAAGACTTTCAAAAATACTAATCACAACATTTCTGTAATTTGCAACTAGCATCAATTGA-TA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204747536 245 - 205426864 aaaaggctcagaaagtgaaatcagttccaatgctatcatctt-tcctcaagctgagctacggtgttcaattctccaAATGTGAGGTAGCTGGCAAA------GACGTTG---CT------GTTGTTTTCTGGATTTAAGCTGGGAAGATAGTAACTGGAGCCTAGGAGAAGAATTTTC-----------AACTAACGAAGTGTT--GTTA--ATATAAGACTTTCAAAAATACTAATCACAACATTTCTGTAATTTGCAACTAGCATCAATTGA-TA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564049 256 + 86207423 AAAAGGCTCAGAAAGTGAAATCAGTTCCAATGCTATCATCTT-TCCTCAAGCTGAGCTACAGTGTTCAATTCTCCAAATGTGAGGTAGCTGGCAAA------AACGTTG---CT------GTTGTTTTCTGGATTTAAGCTGGGAAGATAGTAACTGGAGCCTAGGAGAAGAAttttctttttttttttttttattGAAGTGTT--GTTC--ATATAAGACTTTCGAAAATACTAATCACAACATTTCTGTAATTTGCAACTAGCATCAATTGA-TA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66047342 245 + 204787373 aaaagactcagaaagtgaaatcagtgccaatgctattttctt-ccctcAAGCTGAGCTACAGCGTTCAATTCTCCAAATGTGAAGTAGCTGGCAAA------TATGTTG---CT------GTTGTTTTCTGAATTTAAGCTGGGAAGATAGTAACTAGAGCCTAGGAGAAGAATTTTC-----------AACTAATGAAGTGTT--GTTA--GTATAAGACTTTCAAAAATACTAATCCCAACATTTCTGTGATTTGCAGCTGGCATCAATTGA-CA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979187 245 - 192460366 aaaagactcagaaagtgaaatcagtgccaatgctattttctt-ccctcAAGCTGAGCTACAGCGTTCAATTCTCCAAATGTGAAGTAGCTGGCAAA------TATGTTG---CT------GTTGTTTTCTGAATTTAAGCTGGGAAGATAGTAACTAGAGCCTAGGAGAAGAATTTTC-----------AACTAATGAAGTGTT--GTTA--GTATAAGACTTTCAAAAATACTAATCCCAACATTTCTGTGATTTGCAGCTGGCATCAATTGA-CA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091155 245 - 17224310 aaaagactcagaaagtgaaatcagtgccaatgctattatctt-ccctcaagctgagctacagcgttcaattctccaAATGTGAAGTAGCTGGCAAA------TATGTTG---CT------GTTGTTTTCTGAATTTAAGCTGGGAAGATAGTAACTAGAGCCTAGGAGAAGAATTTTC-----------AACTAATGAAGTGTT--GTTA--GTATAAGACTTTCAAAAATACTAATCCCAACATTTCTGTGATTTGCAGCTGGCATCAATTGA-CA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17403296 245 - 41321030 aaaagactcagaaagtgaaatcagtgccaatgctattatctt-ccctcaagctgagctacagcgttcaattctccaAATGTGAAGTAGCTGGCAAA------TATGTTG---CT------GTTGTTTTCTGAATTTAAGCTGGGAAGATAGTAACTAGAGCCTAGGAGAAGAATTTTC-----------AACTAATGAAGTGTT--GTTA--GTATAAGACTTTCAAAAATACTAATCCCAACATTTCTGTGATTTGCAGCTGGCATCAATTAA-CA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477011 245 - 101219884 aaaagactcagaaagtgaaatcagtgccaatgctattatctt-ccctcaagctgggctacagtgttcaattctccaAATGTGAAGTAGTTGGCAAA------GATGTTG---CT------GTTGTTTTCTGGATTTAAGCTGGGAAGATAGTAACTAGAGCCTAGGAGAAGAATTTTC-----------AACTAATGAAGTGTT--GTTA--GTGTAAGACTTTCAAAAATACTAATCCCAACATTTCTGTGATTTGCAACTGGCATCAATCGA-CA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 859596 245 - 924385 aaaagactcagaaagtgaaatcagtgccaatgctattatctt-ccctcaagctgagctatagcgttcaattctccaAATGTGAAGTAGCTGGCAAA------TATGTTG---CT------GTTGTTTTCTGAATTTAAGCTGGGAAGATAGTAACTAGAGCCTAGGAGAAGAATTTTC-----------AACTAATGAAGTGTT--GTTA--GTATAAGACTTTCAAAAATACTAATCCCAACATTTCTGTGATTTGCAGCTGGCATCAATTGA-CA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6702852 245 - 10587913 aaaagactcagaaagtgaaatcagtgccaatgctattatctt-ccctcaagctgagctacagtgttcaattctccaAATGTGAAGTAGCTGGCAAA------GATGTTG---CT------GTTGTTTTCTGGATTTAAGCTGGGAAGATGGTAACTAGAGCCTAGGAGAAGAATATTC-----------AACTAATGAAGTGTT--GTTA--GTATAAGACTTTCAAAAATACTAATCCCAACATTTCTGTGATTTGCAACTGGCATCAATTGA-CA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025130 245 - 98464013 AAAAGGCTCAGAAAGTAAAATCAGTGCCAATGCCATCATCTT-CCCTCAAGCTAAGCTACAGTGTTCAATTCTCCAAATGTGAAGTAGCTGGCAAA------GATGTTG---CT------GTTGTTTTCTGGATTTAAACTGGGAAGATAGTAACTGGAGTCTAGGAGAAGAATTTTC-----------AACTAATGAAGTGTT--GTTA--ATATAAGACTTTCAAAAAGACTAATCACAACATTTCTGTGATTTGCAACTAGCTTCAACTGA-TA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27707659 246 + 27742158 AAAAGGCTCAGAAAGTAAAATCAGTGCCAGTGCCATCATCTT-CCCTCAAGCTAAGCTACAGTATTCAATTCTCCAAATGTGAAGTAGCTGGCAAA------GATGTTG---CT------GTTATTTTCTGGATTTAAACCGGGAAGATAGTAACTGGAGCCTAGGAGAAGAATTTTC-----------AACTAATGAAGTGTT--GTTA--ATATAAGACTTTCAAAAAGACTAATCACAACATTTCTGTGATTTGCAACTAGCTTCAACTGATTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245066 245 - 4835464 aaaaggctcagaaagtaaaatcagtgccaatgccatcatctt-ccctcaagctaagctacagtattcaattctccaAATGTGAAGTAGCTGGCAAA------GATGTTG---CT------GTTGTTTTCTGGATTTTAACCGGGAAGATAGTAACTGGAGCCTAGGAGAAGAATTTTC-----------AACTAATGAAGTATT--GTTA--ATATAAGACTTTCAAAAAGACTAATCACAACATTTCTGTGATTTGCAACTAGCTTCAACTGA-TA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703713 245 + 4093027 aagaggctcagaaagtaaaatcagtgccaatgccatcatctt-ccctcaagctaagctacagtgttcaattctccaAATGTGAAGTAGCTGGCAAA------GGTGTTG---CT------GTTGTTTTCTGGATTTAAACCGGAAAGATAGTAACTGGAGACTAGGAGAAGAATTTTC-----------AACTAATGAAGTGTT--GTTA--ATATAAGACTTTCAAAAAGACTAATCACAACATTTCTGTGATTTGCAACTAGCTTCAACTGA-TA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1601870 250 - 9149476 aaaaggcttagaaaatgaaatcagtgccaatgctatcaccttccccccaagctgagttacagtgtgtaattctccaAATGTGAAGTAACTGGCAAA------GCTGCTG---CT------GTTGTGTTCTGGATTTAAACTGGGAAGATAGTAACTGGAACCTAAGGAAATAATTTTC-----------AACTAATGAAGTGTTAAATTAATATATAAGACTTTCAAAGAGCCCAATCTCAACATTTTTGTGATTTGCAACTAGAATCAACTGA-TA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 573863 254 + 2414909 aaaaggcttagaaaatgaaatcagtgccaatgctatcacctt-cccccaagctgagttacagtgtgcaattctccaAATGTGATGTAGCTGGCAAAGATGTTGCTGCTG---TT------GTTGTTTTCTGGATTTAAACTGGAAAGATACTAACTGGAACCTAAGGAAAGAATTTTC-----------AACTAATGAAGTGTTAAATTAATATGTAAGACTTTC-AAGAGCCCAATCGCAACATTTCTGTGATTTGCAACTAGAATCAACTGA-TA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11038835 252 + 30473821 AAAAGGCTCAGAAAA-GAAATCAGTGCCAATGCTATCTCTTT-CCTCCAAGCTGAGTTACGGTGTGCAAGTCTCCAAATGCGAAGTAGCTGGCAGAGATCTTGTTGCTG---CT------GTTGTTTTCTGGATTTAGACTGGGAAGTTTGTAGCTGGAACCTAGCAAAATAATTTTC-----------AACTAATGAGGTATTAAATTA--ATGGGAGACTTTCAAAGAGCTCAAACGCAACATTTCCGTGATTTGCAGATAACACCGATTGA-TA i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45737472 243 - 149736546 AACAGGCTTCAAACATGAATCC--TGCCAAAGGTATCA-CTT-CCCCCAAGCTGAGTTGCAGAGCTTGCATCTCCAAATGTGAAGTGGTTGGCAAA------AGGGCTGTGCCT------GTTGTTTTCTGGATTTAAGCTAAATGAAAAAT--CTGGAACTAGAGAAAAGAACTTCC-----------AAGCAATGAAGCAAG--GATA--ACAAAAGACTGCCAAGAGGACTAACTGCAAAAATCCTGTGATTTCCAACCCTTATCTGCTGA-TG i mm10.chr6 C 0 C 0 s canFam3.chr20 16584464 246 + 58134056 AAAAGGCTTAGAAAATGAA-TCAGT-CCAATGCTGTCACCTT-CCCCCAAGCTGAGTTATAGTGTTCAGTTCTCCAAATGTGAAGTAGCTGGCAAA------GATGCTG---TTACTCTGGTTGTTTTCTAGATTTAAACTGGGAAGGTGGTAGCTGGAACCCAGGGGAAAAAATTCC-----------AACTAATGAAGTGTTAAATTA--ATATAAGACTTTCAAAGGCAccaatcacaacatttctataattggca-ctgg----aattga-ta i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1769692 241 - 2187301 AAAAGTCTTAGTAAAT-AACTCAGTGCCAATGCTACCACTGT-CCCCCAAGCTGAGTTACCATGCTCAATTCTCCAAATGTGAAGTAGTCAGCAAA------AATGTTG---TTCATGTTCTTGTTTCCTAGAGTTAAACTGGGAAGG------CTGGAACCAAGGGAAAGAA-TTTC-----------AACTCATCAAGTGTTGAATTA--ATCTAAAACTTTCATAAGGAC---TCACCACATTTCTGTGATTT-Taactggcactaattga-ta i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I a score=1870199.000000 s hg38.chrUn_KI270749v1 92536 150 + 158759 TATCTTTGA-TTTTCTCTATAA---AAACAAAGACTGAACTGGCCAGATTAGCAACTCAGAGTTATGCTGATCTTCCA-GGCTGGAGGCCTCGCCCAAGATAACATCATGAA-CAT-TTTATAC-CTCCTACAGAATAACA-GTATACTTACAATCTGC s panTro5.chr3 201979780 148 - 202621043 TATCTTTGA-TTTTCTCTATAA---AAACA--GACTGAACTGGCCAGATTAGCAACTCAGAGTTATGCTGATCTTCCA-GGCTGGAGGCCTCGCCCAAGATAACATCATGAA-CAT-TTTATAC-CTCCTACAGAATAACA-GTATACTTGCAATCTGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204747781 148 - 205426864 TATCTTTGA-TTTTCTCTATAA---AAACA--GACTGAACTGGCCAGATTAGCAACTCAGAGTTATGCTGATCTTCCA-GGCTGGAGGCCTCGCCCAAGATAACATCATGAA-CAT-TTTATAC-CTCCTACAGAATAACA-GTATACTTGCAATCTGC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564305 150 + 86207423 TATCTTTGA-TTTTCTCTATAA---AAACAAAGACTGAACTGGCCAGATTAGCAACTCAGAGTTATGCTGATCTTCCA-GGCTGGAGGCCTTGCCGAACATAACATCATGAA-CAT-TTTATAC-CTCCTACAGAACAACA-GTATACTTGCAATCTGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66047587 150 + 204787373 TATCTTTGA-TTTTCTCTATAA---AAACAAAGACTGAACTGGCCAAATTAGCAGCTCAGGGTTATGCTGATCTTCCA-GGCTGGAGGCCTTGTCCAAGATAACATCATGAA-CAT-TTTCTAC-CTCCTACAGAACAATA-GTACACTTGCAATCTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979432 150 - 192460366 TATCTTTGA-TTTTCTCTATAA---AAACAAAGACTGAACTGGCCAAATTAGCAGCTCAGGGTTATGCTGATCTTCCA-GGCTGGAGGCCTTGTCCAAGATAACATCATGAA-CAT-TTTCTAC-CTCCTACAGAACAATA-GTACACTTGCAATCTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091400 150 - 17224310 TATCTTTGA-TTTTCTCTATAA---AAACAAAGACTGAACTGGCCAAATTAGCAGCTCAGGGTTATGCTGATCTTCCA-GGCTGGAGGCCTTGTCCAAGATAACATCATGAA-CAT-TTTCTAC-CTCCTACAGAACAATA-GTACACTTGCAATCTGC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17403541 150 - 41321030 TATCTTTGA-TTTTCTCTATAA---AAACAAAGACTGAACTGGCCAAATTAGCAGCTCAGGGTTATGCTGATCTTCCA-GGCTGGAGGCCTTGTCCAAGATAACATCATGAA-CAT-TTTCTAC-CTCCTACAGAACAATA-GTACACTTGCAATCTGC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477256 142 - 101219884 TATGTTTGA-TTTTCTCTATAA---AAACAAAGACTGAACTGGCCAAATTAGCAGCTCAGGGTTATGCTGATCTT---------GAGGCCTTGTCCAAGATAACATCACGAA-CAT-TTTCTAC-CTCCCACAGAACAATA-GTACTCTTGCAATCTGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 859841 150 - 924385 TATCTTTGA-TTTTCTCTATAA---AAACAAAGACTGAACTGGCCAAATTAGCAGCTCAGGGTTATGCTGATCTTCCA-GGCTGGAGGCCTTGTCCAAGATAACATCATGAA-CAT-TTTCTAC-CTCCTACAGAACAATA-GTACACTTGCAATCTGC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703097 150 - 10587913 TATCTTTGA-TTTTCTCTATAA---AAACAAAGACTGAACTGGCCAAATTAGCAGCTCAGAGTTATGTTGATCTTCCA-GGCTGGAAGCCTTGTCCAAGATAACATCATGAA-CAT-TTTCTAC-CTCCTACAGAACAATA-GTACACTTGCAATCTGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025375 149 - 98464013 TCTTTTTTA-TTTTCTCTATAA---AAACAAAGACTGAACTGACCAAATTAGCACCACAGAGTT-TGCTGATCTTCAA-GGCAGGAGGCCTTGCCCAAGATAACATTATGAA-CAT-TTTCTAC-CTCCTACAGAACAAGA-GTACACTTGCAATCTGC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27707905 149 + 27742158 TCTCTTTGA-TTTTCTCTATAG---AAGCAAAGACTGAACTGACCAAATTAGCAGCTCAGAGTT-TGCTGATCTTCAA-GGCAGGAGGCCTTGCCCAGGATAACATTATGAA-CAT-TTTCTAC-CTCCTACAGAACAAGA-GTACACTTGCAATATGC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245311 149 - 4835464 TCTCTTTGA-TTTTCTCTATAA---AAACAAAGACTGAACTGACCAAATTAGCATCTCAGAGTT-TGCTAATCTTCAA-GGCAGGAGGCCTTGCCCAGGATAACATTATGAA-CAT-TTTCTAC-CTCCTACAGAACAAGA-GTACACTTGCAATCTGC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3703958 149 + 4093027 TCTCTTTGA-TTTTATCTATAA---AAACAAAGACTGAACTGACCAAATTAGCAGCTCAGAGTT-TGCTGATCTTCAA-GGCAGGAGGCCTTGCCCAAGATAACATTATGAA-CAT-TTTCTAC-CTCCTACAGAACAAGA-GTACACTTGCAATCTGC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1602120 144 - 9149476 TCCCTTTGA-TTTTCT---------GAACAAAGACTGAACTGGCAAAATTAGCAGCTCAGAAGTATGCTGATCTTCCA-GGCTGGAGGCCTTGCCCAAGTTAATGTCATGAG-CAT-TTTCCAC-CTCCTACAGAACAACA-GTATGCTTGCAATCTGC i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 574117 153 + 2414909 TCCCTTTGA-TTTTCTCCACAAAGACAACAAAGACTGAACTGGGAAAATTAGCAGCTCAGAGGCACGCTGATCTTCCA-GGCTGGGGGCCTTGCCTAAGATAAGGTCATGAG-CAT-TTTCCAC-CTCCTACAGAACAACA-GTATGCTTGCAATCTGC i proCoq1.NW_012148064v1 C 0 M 9350 s mm10.chr6 45737715 147 - 149736546 CCCCTTTGATTTTTCTCTGCCATG-AGATATAG---GAGCTGAATACAT----ATGTTAGAGGGATGTCTACCTTTGA-GGCTAGAAATATTGACTAAGTAAATGTCTTGAG-CAG-TTTCCAC-TTCCTGCACAACAGCATGTGCCCATGTAATCTAC i mm10.chr6 C 0 C 0 s canFam3.chr20 16584710 156 + 58134056 tccctttgatttttctccacaaagaggatgaagaccgaactggcaAAATTTGCAGCTCAGATTTATGCTGTCCTTCCAGGGATGGAAGCCTTGCCTAAGACAATGTCACGAG-CAT-TTTTGCCTTTCCAACAGAAAATCA-GTATGCTTGCAATCTGC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1769933 155 - 2187301 tccctttgg-ttttccccaaaaataggacaaagattgaacaggcaAAATTAACATTTCAGATTTATTCTGCCTTTCTG-TGCTGGAGGCCTTGCAGAAGATAATGTCATAAAGCATGCTTCTAT-CTCCTACAGAGTAACA-GTTCGCTTGCAATCTGG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11039087 0 + 30473821 C a score=38076.000000 s hg38.chrUn_KI270749v1 92686 7 + 158759 CAGACTC s panTro5.chr3 201979928 7 - 202621043 CAGACTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204747929 7 - 205426864 CAGACTC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564455 7 + 86207423 CAGACTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66047737 6 + 204787373 CAGAC-A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979582 6 - 192460366 CAGAC-A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091550 6 - 17224310 CAGAC-A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17403691 6 - 41321030 CAGAC-A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477398 6 - 101219884 CAGAC-A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 859991 6 - 924385 CAGAC-A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703247 6 - 10587913 CAGAC-A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025524 7 - 98464013 CAGACTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708054 7 + 27742158 CAGACTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245460 7 - 4835464 CAGGCTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704107 7 + 4093027 CAGACTA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1602264 7 - 9149476 CAGACTG i micMur3.chr32 C 0 C 0 s mm10.chr6 45737862 6 - 149736546 CGGAT-G i mm10.chr6 C 0 I 1 s canFam3.chr20 16584866 7 + 58134056 CAGACTG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1770088 7 - 2187301 CAGCCTA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11039087 0 + 30473821 C a score=339838.000000 s hg38.chrUn_KI270749v1 92693 28 + 158759 TATGACTGAAATGCAGAAACAATAAAAC s panTro5.chr3 201979935 28 - 202621043 TAAGACTGAAATGCAGAAACAATAAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204747936 28 - 205426864 TAAGACTGAAATGCAGAAACAATAAAAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564462 28 + 86207423 TATGATTGAAATGCAGAAACAATAAAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66047743 28 + 204787373 TAGGACTGAAATGCAGAAACATTAAAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979588 28 - 192460366 TATGACTGAAATGCAGAAACATTAAAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091556 28 - 17224310 TATGACTGAAATGCAGAAACATTAAAAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17403697 28 - 41321030 TATGACTGAAATGCAGAAACATTAAAAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477404 28 - 101219884 TATGACTGAAATGCAGAAACAATAAAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 859997 28 - 924385 TATGACTGAAATGCAGAAACATTAAAAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703253 28 - 10587913 TATGACTGAAATGCAGAAACAATAAAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025531 28 - 98464013 TAAGACTGAAATGCAGAAATGATAAAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708061 28 + 27742158 TAATATTGAAATGCAGAAGTGATAAAAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245467 28 - 4835464 TAAGACTGAAATGCAGAAATGATAAAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704114 28 + 4093027 TAAGACTGAAATGCAGAAATGATAAAAC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1602271 28 - 9149476 CATGAGCAAAATGCAGCAACTTTAAAAC i micMur3.chr32 C 0 I 64 s otoGar3.GL873534 11039087 28 + 30473821 TCTGATGGAAATGAAGAAACTTTAAAAC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45737869 28 - 149736546 AGAAAATTAAGTGCAGAAACATTAAAAT i mm10.chr6 I 1 C 0 s canFam3.chr20 16584873 28 + 58134056 TAAAACTAAAATACAGAAACTTGAAAAC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1770095 27 - 2187301 -CAGTTTGAAATACAGAAACATTGAAAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I a score=32040.000000 s hg38.chrUn_KI270749v1 92721 3 + 158759 AAT s panTro5.chr3 201979963 3 - 202621043 AAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204747964 3 - 205426864 AAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564490 3 + 86207423 AAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66047771 3 + 204787373 AAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979616 3 - 192460366 AAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091584 3 - 17224310 AAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17403725 3 - 41321030 AAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477432 3 - 101219884 GAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860025 3 - 924385 AAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703281 3 - 10587913 AAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025559 3 - 98464013 AAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708089 3 + 27742158 AAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245495 3 - 4835464 AAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704142 3 + 4093027 AAT i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45737897 3 - 149736546 AAT i mm10.chr6 C 0 I 922 s canFam3.chr20 16584901 3 + 58134056 AAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1770122 3 - 2187301 AGT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e micMur3.chr32 1602299 64 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11039115 0 + 30473821 C a score=555252.000000 s hg38.chrUn_KI270749v1 92724 58 + 158759 AATTAGTAACTCTGATTTTGCCACACGCCTGGGCAGCTCAAATTT-CTTGACGGTTATG s panTro5.chr3 201979966 58 - 202621043 AATTAGTAACTCTGATTTTGCCACACGCCTGGGCAGCTTAAATTT-CTTGATGGTTATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204747967 58 - 205426864 AATTAGTAACTCTGATTTTGCCACACGCCTGGGCAGCTTAAATTT-CTTGATGGTTATG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564493 58 + 86207423 AATTAGTAACTCTGATTTTGCCACACGCCTGGGCAGCTCAAATTT-CTTGACGGTCATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66047774 57 + 204787373 AATTAGTAACTCTGATTTTACTA-ATGCCTGGGCAGCTCAAATTT-CTTGACAGTTATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979619 57 - 192460366 AATTAGTAACTCTGATTTTACTA-ATGCCTGGGCAGCTCAAATTT-CTTGACAGTTATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091587 57 - 17224310 AATTAGTAACTCTGATTTTACTA-ATGCCTGGGCAGCTCAAATTT-CTTGACAGTTATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17403728 57 - 41321030 AATTAGTAACTCTGATTTTACTA-ATGCCTGGGCAGCTCAAATTT-CTTGACAGTTATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477435 57 - 101219884 AATTAGTAACTCTGATTTTACTA-ATGCCTGGGCAGCTCAAATTT-CTTGACAGTTATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860028 57 - 924385 AATTAGTAACTCTGATTTTACTA-ATGCCTGGGCAGCTCAAATTT-CTTGACAGTTATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703284 57 - 10587913 AATTAGTAACTTTGATTTTACTA-ATGCCTAGGCAGCTCAAATTT-CTTGACAGTTATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025562 58 - 98464013 AATTAGTAACTCTGATCTTGCCACACTCCTGAGCAACTTAAATTT-CTTGAAGGTTATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708092 58 + 27742158 AATTAGTAACTCTGATCTTGCCACACTCCTGAGCAACTTAAATTT-CTTGAAGATTAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245498 58 - 4835464 AATTAGTAACTCTGATCTTGCCACATTCCTGAGCAACTTAAATTT-CTTGAAGGTTATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704145 58 + 4093027 AATTAGTAACTCTGATCTTGCCATGCTCCTGAGCAACTTAAATTT-CTTGAAAGTTATA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11039115 56 + 30473821 AATTGGTAAC--TGATTTTGCCACATACCAGAGCAACCCAAATTT-CTTGAGGCTGATA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16584904 59 + 58134056 AATTGCAAGCTCTGATTTTGCCACACTCCAGGCCAACCCCAGTTTCCTTGAAGCCTATA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1770125 58 - 2187301 GATTGCTAACTCTGATTTTTCCATACTCCAGGACAATGCCAGTTT-TCTCAAGGGTTTG i dasNov3.JH563077 C 0 I 478 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45737900 922 - 149736546 I e micMur3.chr32 1602299 64 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I a score=54458.000000 s hg38.chrUn_KI270749v1 92782 5 + 158759 ACCCT s panTro5.chr3 201980024 5 - 202621043 ACCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748025 5 - 205426864 ACCCT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564551 5 + 86207423 ACCCT i nomLeu3.chr21 C 0 I 1 s rheMac8.chr2 66047831 5 + 204787373 ACCCT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60979676 5 - 192460366 ACCCT i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11091644 5 - 17224310 ACCCT i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17403785 5 - 41321030 ACCCT i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64477492 5 - 101219884 ACCCT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 860085 5 - 924385 ACCCT i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6703341 5 - 10587913 ACCCT i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46025620 5 - 98464013 ACCCT i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27708150 5 + 27742158 ACCCT i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 245556 5 - 4835464 ATCCT i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3704203 5 + 4093027 ACCCT i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11039171 5 + 30473821 ACTGT i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16584963 5 + 58134056 ACACt i canFam3.chr20 C 0 I 1 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45737900 922 - 149736546 I e micMur3.chr32 1602299 64 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e dasNov3.JH563077 1770183 478 - 2187301 I a score=487211.000000 s hg38.chrUn_KI270749v1 92787 43 + 158759 AAACATCTGCTTGAACTAATATATACTT-T--GTTATGCAAATCTA s panTro5.chr3 201980029 43 - 202621043 AAACATCTGCTTGAACTAATATATACCT-T--GTTATGCATATCTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748030 43 - 205426864 AAACATCTGCTTGAACTAATATATACCT-T--GTTATGCATATCTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564557 43 + 86207423 AAATATCCGCTTGAACTAATATATACTT-T--GTTATGCATATCTA i nomLeu3.chr21 I 1 C 0 s rheMac8.chr2 66047837 43 + 204787373 AAATATCTACTTGAACTAATATATACTT-T--GTTATGCATATCTA i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60979682 43 - 192460366 AAATATCTACTTGAACTAATATATACTT-T--GTTATGCATATCTA i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11091650 43 - 17224310 AAATATCTACTTGAACTAATATATACTT-T--GTTATGCATATCTA i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17403791 43 - 41321030 AAATATCTGCTTGAACTAATATATACTT-T--GTTACGCATATCTA i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64477498 43 - 101219884 AAATATCTGCTTGAACTAATATATACTT-T--GCTATGCATATATA i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 860091 43 - 924385 AAATATCTGCTTGAACTAATATATACTT-T--GTTACGCATATCTA i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6703347 43 - 10587913 AAATATCTGCTTGAACTAATATATACTT-T--GTTATGCATGTCTA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46025626 43 - 98464013 AAATATCTACTTGAAGTAATACACACTT-A--GTTATGCATATCTA i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27708156 43 + 27742158 AAATATCTACTTGAAGTAATATATACTT-C--GTTATGCATGTCTA i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 245562 43 - 4835464 AAATATTTACTTGAAGTAATACACACTT-T--GTTATGCATATCTA i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3704209 43 + 4093027 AAATATCTACTTAAAGTAATACACACTT-T--GTTATGCATATCTA i aotNan1.NW_018502033v1 I 1 C 0 s micMur3.chr32 1602363 41 - 9149476 AAATATCTACTTGAGCTTATAAATACT-----ATTATGCATATTTA i micMur3.chr32 I 64 C 0 s otoGar3.GL873534 11039177 41 + 30473821 AAATATCTACTTGAGCTTACAGATATT-----ATTATGCATATTTA i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16584969 44 + 58134056 aaatatctatttgaatttataaatatttaa--gttatacatatgta i canFam3.chr20 I 1 I 1 s dasNov3.JH563077 1770661 45 - 2187301 AAATATCTACTTGAACCTATAAATACTT-TAAATTATGTGTAGTTA i dasNov3.JH563077 I 478 C 0 e eulFla1.LGHW01000501v1 6119 1525 + 635616 I e eulMac1.LGHX01000499v1 6241 1267 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45737900 922 - 149736546 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I a score=364769.000000 s hg38.chrUn_KI270749v1 92830 28 + 158759 TTTAAAAC--ATA-TTTC--AATAAA-CATGCAT s panTro5.chr3 201980072 28 - 202621043 TTTAAAAC--ATA-TTTC--AATAAA-CATGCAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748073 28 - 205426864 TTTAAAAC--ATA-TTTC--AATAAA-CATGCAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564600 28 + 86207423 TTTAAAAC--ATA-TTTT--GATAAA-CATGCAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66047880 28 + 204787373 TTTAAAAC--ATA-TTTT--GATAAA-CATGTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979725 28 - 192460366 TTTAAAAC--ATA-TTTT--GATAAA-CATGTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091693 28 - 17224310 TTTAAAAC--ATA-TTTT--GATAAA-CCTGTAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17403834 28 - 41321030 TTTAAAAC--ATA-TTTT--GATAAA-CATGTAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477541 28 - 101219884 TTTAAAAC--ATA-TTTT--GATAAA-CATGTAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860134 28 - 924385 TTTAAAAC--ATA-TTTT--GATAAA-CATGTAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703390 28 - 10587913 TTTAAAAC--ATA-TTTT--GATAAA-CATGTAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025669 28 - 98464013 TTTAAAAC--ATA-TTTT--GATAAA-TATGCAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708199 29 + 27742158 TTTAAAAC--ATATTTTT--GATAAA-TGTCTAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245605 28 - 4835464 TTTAAAAC--ATA-TTTT--GATAAA-TGTGTAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704252 28 + 4093027 TTTAAAAC--ATA-TTTT--GATAAA-TGTGTAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1602404 28 - 9149476 TTTTAAAC--ATA-GTTT--AATAAA-CATGTGT i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 7508 28 + 631505 TTTTAAGC--ATA-GTTC--AATAAA-TATGTGT i eulMac1.LGHX01000499v1 I 1267 I 686 s eulFla1.LGHW01000501v1 7644 28 + 635616 TTTTAAGC--ATA-GTTC--AATAAA-TATGTGT i eulFla1.LGHW01000501v1 I 1525 I 686 s otoGar3.GL873534 11039218 28 + 30473821 TTGAAAAT--ATA-TTTC--AATAAG-CATATCT i otoGar3.GL873534 C 0 I 2 s canFam3.chr20 16585014 27 + 58134056 tttaaaac--ata-tattaCAATAAA----GCAT i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1770706 31 - 2187301 TATAAAACAGATA-TGTC--aataaaatatatat i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45737900 922 - 149736546 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I a score=172262.000000 s hg38.chrUn_KI270749v1 92858 17 + 158759 AG--TGAAATATATTATTG s panTro5.chr3 201980100 17 - 202621043 AG--TGAAATATATTATTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748101 17 - 205426864 AG--TGAAATATATTATTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564628 17 + 86207423 AG--TGAAATATATTACTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66047908 17 + 204787373 AG--TGAAATATATTATTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979753 17 - 192460366 AG--TGAAATATATTATTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091721 17 - 17224310 AG--TGAAATATATTATTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17403862 17 - 41321030 AG--TGAAATATATTATTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477569 17 - 101219884 AG--TGAAATATATCATTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860162 17 - 924385 AG--TGAAATATATTATTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703418 17 - 10587913 AG--TGAAATATATTATTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025697 17 - 98464013 AG--TGAAATAGATTATTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708228 17 + 27742158 AG--TGAAATAGACTATTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245633 17 - 4835464 AG--TGAAATAGATTATTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704280 17 + 4093027 AG--TGAAATAGATTATTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1602432 18 - 9149476 ATA-TGAAATAGATTGCTA i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11039248 17 + 30473821 AT--TGAGATAGATTGTTG i otoGar3.GL873534 I 2 C 0 s canFam3.chr20 16585041 16 + 58134056 --GTTGAAATAGATTATT- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1770737 17 - 2187301 at--taaaatagaatttta i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 7672 686 + 635616 I e eulMac1.LGHX01000499v1 7536 686 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45737900 922 - 149736546 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I a score=2085299.000000 s hg38.chrUn_KI270749v1 92875 191 + 158759 TCTGTGGTAAAAGGGAAATCCCAATATATTAATGAT----------------GTAATGAACTGTAAAAA-TAATCAATATTGGTTTTTCTGCA-TGTTGACCAATGTATGAACCTATGTTTTA----TCTTCATTCTCATTCTTTCAG---AATAAAAAGCAACATCTATTTAGTACATGCAAATAACTTGTGGGAGTTTTCAAGAATATACAAAT s panTro5.chr3 201980117 191 - 202621043 TCTGTAGTAAAAGGGAAATCCCAATATGTTAATGAT----------------GTAATGAACTGTAAAAA-TAATCAATATTGGTTTTTCTGCA-TGTTGACCAATGTATGAACCTATGTTTTA----TCTTCATTCTCATTCTTTCAG---AATAAAAAGCAACATCTATTTAGTACATGCAAATAACTTGTGGGAGTTTTCAAGAATATACAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748118 191 - 205426864 TCTGTAGTAAAAGGGAAATCCCAATATGTTAATGAT----------------GTAATGAACTGTAAAAA-TAATCAATATTGGTTTTTCTGCA-TGTTGACCAATGTATGAACCTATGTTTTA----TCTTCATTCTCATTCTTTCAG---AATAAAAAGCAACATCTATTTAGTACACGCAAATAACTTGTGGGAGTTTTCAAGAATATACAAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564645 191 + 86207423 TCTGTACTAAAAGGGAAATCCCAATATGTTAATGAT----------------GTAATGAACTGTAAAAA-TAATCAATATTGGTTTTTCTGCA-TGTTGACCAATGTATGAACCTATGTTTTA----TCTTCATTCTCATTCTTTCAG---AATAAAAAGCAACATCTATTTAGTACATGCAAATAACTTGTGGGAGTTTTCAAGAATATACAAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66047925 192 + 204787373 TCTGTAATAAAAGGGAAATCCCAATATGTTAACGAT----------------GTAATGAACTGTAAAAAGTGATCAATATTGTTTTTTCTGCA-TGTTGACCAATGTATGGACCTATTTTTTA----TCTTCATTCTCATTCTTTCAG---AATAAAAAGCAACATCTATTTAGTACAAGCAAATAACTTGTGGGAGTTTTCAAGAATATACAAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979770 192 - 192460366 TCTGTAATAAAAGGGAAATCCCAATATGTTAACGAT----------------GTAATGAACTGTAAAAAGTGATCAATATTGTTTTTTCTGCA-TGTTGACCAATGTATGGACCTATTTTTTA----TCTTCATTCTCATTCTTTCAG---AATAAAAAGCAACATCTATTTAGTACAAGCAAATAACTTGTGGGAGTTTTCAAGAATATACAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091738 192 - 17224310 TCTGTAATAAAAGGGAAATCCCAATATGTTAACGAT----------------GTAATGAACTGTAAAAAGTGATCAATATTGTTTTTTCTGCA-TGTTGACCAATGTATGGACCTATTTTTTA----TCTTCATTCTCATTCTTTCAG---AATAAAAAGCAACATCTATTTAGTACATGCAAATAACTTGTGGGAGTTTTCAAGAATATACAAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17403879 192 - 41321030 TCTGTAATAAAAGGGAAATCCCAATATGTTAACGGT----------------GTAATGAACTGTAAAAAGTGATCAATATTGTTTTTTCTGCA-TGTTGACCAATGTATGGACCTATTTTTTA----TCTTCATTCTCATTCTTTCAG---AATAAAAAGCAACATCTATTTGGTACATGCAAATAACTTGTGGGAGTTTTCAAGAATATACAAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477586 192 - 101219884 TCTGTAGTAAAAGGGTAATCCCAATATGTTAATGAT----------------GTAACGAACTGTAAAAAGTGATCAATATTGGTTTTTCTGCA-TGTTGACCAATGTATGGACCTATTTTTTA----TCTTCATTCTCATTCTTTCAG---AATAAAAAGCAGCATTTATTTAGTACATGCAAATAACTTGTGGGAGTTTTCAAGAATATACAAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860179 192 - 924385 TCTGTAATAAAAGGGAAATCCCAATATGTTAACGGT----------------GTAATGAACTGTAAAAAGTGATCAATATTGTTTTTTCTGCA-TGTTGACCAATGTATGGACCTATTTTTTC----TCTTCATTCTCATTCTTTCAG---AATAAAAAGCAACATCTATTTAGTACATGCAAATAACTTGTGGGAGTTTTCAAGAATATACAAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703435 192 - 10587913 TCTGTAGTAAAAGAGAAATCCTAATATGTTAACGAT----------------GTAATGAACTGCAAAAAGTGATCAATATTGGTTTTTCTGCA-TGTTGACCAATGTATGGACCTATTTTTTA----TCTTCATTCTCATTCTTTCAG---AATAAAAAGCAACATGTATTTAGTACATGCAAATAACTTGTGGGAGTTTTCAAGAATATACAAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025714 204 - 98464013 TCTGTAGTAAAGGGAAA----TAATATGTTAATGATTAATGTTAATAATATGTTAATGAAGCATAAAAAGCGTTCAATATAGGTTTTTCTTCA-TATTGAGTAATGTGTGGACCTATTTCTCA----TCTTCATTCTCATTCTTTTAC---AATAAAAAGCAACATCTATTTAGTACAGGCAAATAACTTGTGAGAGTTTTCAAGAATATACAAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708245 188 + 27742158 TGTGTAGTAAAGGGAAA----TAATATGTTAATGAT----------------GTAATGAAGCATGAACAGTGTTCAAGATAGGTTTTTCTTCA-TATTGAGTAATGTGTGGACCAATTTCTCG----TCTTCATTCTTATTCTTTCAC---AATAAAAAGCAACATCTATTTAGTACAGGCAAGTAACTTGTGGGAGTTTTCAAGAATATAGAAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245650 188 - 4835464 TCTGCAGTAAAGGGAAA----TAATATGTTAATGAT----------------GTAATGAAGCATAAAAAGTGTTCAATATAGATTTTTCTTCA-TATTGAGTAATGTGTGAACCTATTTCCCA----ACTTCATTCTCATTCTTTCAC---AATGAAAAAGAACATCTATTTAGTACAGGCAAATAACTTGTGGGAGTTTTCAAGGATATACAAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704297 188 + 4093027 TCTGTAGTAAAGGGAAA----TAATATGTTAATGAT----------------GTAATGAAGCGTAAAAAGTGTTAAATATAGGTTTTTCTTCA-TATTGAGTAATGTGTGGACCTATTTCTCA----TCCTCATTCTCATTCTTTCAC---AATAAAAAGCAACACCTATTTAGTACAGGCAAATAACTTGTGAGAGTTTTCAAGAATATACAAAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1602450 179 - 9149476 TCTGTAGTAAAAGGGAGAACCCAATATGTTAATGAT----------------GAAAGGTAATGTAAAAAATGGTCACTATTAGTTTTTATGCA-TGTTGAGCAATACTCA-----------------TCTTCATCTTCATCCTTTCAA---AAGAAAAAGTGACATCTATTTAGTACATGCAAAGAACTTGTGGGAATGTTCAAGAATATATGAAT i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11039265 188 + 30473821 TATTTAGGAAAAGGGAGAACCCAATGTGTTAATGAT----------------GTAATAAAATGCAGAGCATGATCACAATTAGTTTTTATGCA-TGTTGAGCCACACACACACCTATTTCCTTC---TCTTTATCCTCATCTTTT-------AAAAAAAGCAACATCTGTTCAGTACATAC-AAGAACTTGTGGaaattttcaataataaataaat i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45738822 184 - 149736546 TGTGTATTAAAAAGAAA-TACCAACATTTTAATGAT----------------GAAATAAAATTCAACA--TAATCACTA---GATTTTATGCA-TGTTAAAC-ATTCATCTAAACACTTCTCA----GATGAGCCCATATCCTTTCACAT-AACTAAATGCAACATGCATTTGTAACATGCCAAGAACTTG---GAATTTTCTAGAATGCACATAT i mm10.chr6 I 922 I 1502 s canFam3.chr20 16585057 175 + 58134056 --TGTAGTAGAGGGGAAATCCTAATATGTTAATGAC-------------------ATGAGATGTAAAAA-TGATCACTATTAGTTTTTATGCA-TTTTGAGCAACACATGCCCCTGTTT---A----TATTCACCTTAATTCTTTCAG---AAAAAACA--------TATTCAATACATTCAAAGAACTCATGTGAATTTTCCAGAATACATGGAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1770754 173 - 2187301 tCTGTAGTAAAAGGGAA--CTCAGTAAGTTACTGAA----------------AGAACAAAATGCATAAAATGGTCACTATTCGTTTTTCTGCATTTTTGAGTAACACA---GCTTTTTTCTTCCTCTTCTTCATTTTCATCCTCTCATACAAAATAAAAGGAACATCTATTCAGAATCTACAAAAAA----------------------TATGGAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 7672 686 + 635616 I e eulMac1.LGHX01000499v1 7536 686 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I a score=85794.000000 s hg38.chrUn_KI270749v1 93066 8 + 158759 CAAATTAA s panTro5.chr3 201980308 8 - 202621043 CAAATTAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748309 8 - 205426864 CAAATTAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564836 8 + 86207423 CAAATTAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66048117 8 + 204787373 GAAATTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979962 8 - 192460366 GAAATTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091930 8 - 17224310 GAAATTAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404071 8 - 41321030 GAAATTAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477778 8 - 101219884 GAAATTAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860371 8 - 924385 GAAATTAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703627 8 - 10587913 GAAATTAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025918 8 - 98464013 CAAATTAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708433 8 + 27742158 CAAATTAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245838 8 - 4835464 CAAATTAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704485 8 + 4093027 CAAATTAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1602629 8 - 9149476 TAAATTAA i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11039453 8 + 30473821 taaattaa i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16585232 8 + 58134056 CATAGTAA i canFam3.chr20 C 0 I 4188 s dasNov3.JH563077 1770927 7 - 2187301 -CAAGTAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 7672 686 + 635616 I e eulMac1.LGHX01000499v1 7536 686 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45739006 1502 - 149736546 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I a score=2507089.000000 s hg38.chrUn_KI270749v1 93074 237 + 158759 TTTAGAAGCATATCAGACACCCTACC-----TATGCAAATGGTATT--ATTTTGTTA--ATCTAGTTCTAAACTATATGTTTAACATCATTATACTTCAGGATTATTTTGAATCCTTTTATTTATCAATAA-----TAAAACTTTCTAAGAT--TTTAAATATAAAAT-----ACAAAGCTACCATCTTGAAGTTGTATTTCCTTTA-TTACATGATAATTAGTTGCATAATTAA-AACATG-T--GTGGTCAAAGGTCAGAT s panTro5.chr3 201980316 237 - 202621043 TTTAGAAGCATATCAGACACCCTACC-----TATGCAAATGGTATT--ATTTTGTTA--ATCTAGTTCTAAACTATATGTTTAACATCATTATACTTCAGGATTATTTTGAATCCTTTTATTTATCAATAA-----TAAAACTTTCTAAGAT--TTTAAATATAAAAT-----ACAAAGCTACCATCTTGAAGTTGTATTTCCTTTA-TTACATGATAATTAGTTGCATAATTAA-AACATG-T--GAGGTCAAAGGTCAGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748317 237 - 205426864 TTTAGAAGCATATCAGACACCCTACC-----TATGCAAATGGTATT--ATTTTGTTA--ATCTAGTTCTAAACTATATGTTTAACATCATTATACTTCAGGATTATTTTGAATCCTTTTATTTATCAATAA-----TAAAACTTTCTAAGAT--TTTAAATATAAAAT-----ACAAAGCTACCATCTTGAAGTTGTATTTCCTTTA-TTACATGATAATTAGTTGCATAATTAA-AACATG-T--GAGGTCAAAGGTCAGAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67564844 239 + 86207423 TTTAGAAGCATATCAGAAACCTTACC-----TATGCAAATGGTATTACATTTTGTTA--ATCTAGTTCTAAACTATATGTTTAACATCATTATACTTCAGGATTATTTTGAATCCTTTTATTTATCAATAA-----TAAAACTTCCTAAGAT--TTTAAATATAAAAT-----ACAAAGCTATCATTTTGAAGTTGTATTTCCTTTA-CTACATGATAATTAGTTGCATAATTAA-AACATG-T--GGGGTCAAAGGTCAGAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66048125 239 + 204787373 TTTAGAAACATATCAGACACCCTACC-----TATGCAAATGGTATTACATTGTGTTA--ATCTAGTTCTAAATTATGTGTTTAACATCATTCTACTTCAGAATTATTTTGAATCTTTTTATTTATCAATAA-----TAAAACTTTCTAAGAT--TTTAAATATAAAAT-----ACAAAGCTGCCATTTTGAAGTTGTATTTCCATTA-TTACATGATAATTAGTTGTATAATTAA-AACATG-T--GGGGTCAAAGGTCAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60979970 239 - 192460366 TTTAGAAACATATCAGACACCCTACC-----TATGCAAATGGTATTACATTGTGTTA--ATCTAGTTCTAAATTATGTGTTTAACATCATTCTACTTCAGAATTATTTTGAATCTTTTTATTTATCAATAA-----TAAAACTTTCTAAGAT--TTTAAATATAAAAT-----ACAAAGCTGCCATTTTGAAGTTGTATTTCCATTA-TTACATGATAATTAGTTGTATAATTAA-AACATG-T--GGGGTCAAAGGTCAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11091938 239 - 17224310 TTTAGAAACATATCAGACACCCTACC-----TATGCAAATGGTATTACATTGTGTTA--ATCTAGTTCTAAATTATGTGTTTAACATCATTCTACTTCAGAATTATTTTGAGTCTTTTTATTTATCAATAA-----TAAAACTTTCTAAGAT--TTTAAATATAAAAT-----ACAAAGCTGCCATTTTGAAGTTGTATTTCCATTA-TTACATGATAATTAGTTGTATAATTAA-AACATG-T--GGGGTCAAAGGTCAGAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404079 239 - 41321030 TTTAGAAGCATATCAGACACCCTACC-----TATGCAAATGGTATTACATTGTGTTA--ATCTAGTTCTAAATTATGTGTTTAACATCATTCTACTTCAGAATTATTTTGAATCTTTTTATTTATCAATAA-----TAAAACTTTCTAAGAT--TTTAAATATAAAAT-----ACAAAGCTGCCATTCTGAAGTTGTATTTCCATTA-TTACATGATAATTAGTTGTATAATTAA-AATATG-T--GGGGTCAAAGGTCAGAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64477786 239 - 101219884 TTTAGAAGTATATCAGACACCCTACC-----TATACAAATGGCATTACATTGTGTTA--ATCTAGTTCTAAATTATGTGTTTAACACCATTCTACTTCAGAATTATTTTGAATCTTTTTATTTATCAATAA-----TAAAACTTTCTAAGAT--TTTAAATATAAAAT-----ACAAAGCTACCATTTTGAAGTTGTATTTCCATTA-TTACATGATAATTAGTTGTATAATTAA-AACATG-T--GGGTTCAAAGGTCAGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860379 239 - 924385 TTTAGAAGCATATCAGACACCCTACC-----TATGCAAATGGTATTACATTGTGTTA--ATCTAGTTCTAAATTATGTGTTTAACATCATTCTACTTCAGAATTATTTTGAATCTTTTTATTTATCAGTAA-----TAAAACTTTCTAAGAT--TTTAAATATAAAAT-----ACAAAGCTGCCATTCTGAAGTTGTATTTTCATTA-TTACATGATAATTAGTTGTATAATTAA-AACATG-T--GGGGTCAAAGGTCAGAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703635 239 - 10587913 TTTAGAAGCATATCAGACACCCTACC-----TATATAAATGGTATTACATTGTGTTA--ATCTAGTTCTAAATTACGTGTTTAACATCATTCTACTTCAGAATTATTTTGAATCTTTTTATTTATCAATAA-----TAAAACTTTCTAAGAT--TTTAAATATAAAAT-----ACAAAGCTACCATTTTGAAGTTGTATTTCCATTA-TTACATGATAATTAGTTGTATAATTAA-AGCATG-T--GGGATCAAAGGTCAGAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46025926 238 - 98464013 TTTAGAAGCATATCAGATATTCTACC-----TATACAAATGGTATTACATTTTGTTA--ATCTAGTTCTAAATTATGTGTTTAAAATATTTCTAAATCAGGATTATTGGGGATGTTTTTATTTTTCAATCA-----TAAAACTTTCTAAGAA--TTTAAATATAAAAT-----ACAAAGGTACCATTTTGAAGTTTCATTTCCTTTA-TTACATAATAATTAGTTGTACAATTAC-AATATG-T--GTG-TCAAAAGTCAGAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708441 238 + 27742158 TTTAGAAGCATATCAGATATTCTACC-----TATACAAATGATATTACATTTTGTTA--ATCTAATTCTAAATTATATGTTTAATATCATTCTACATCAGGATTATTGGGGATATTTTTATTTTTCAATCA-----TAAAACTTTCTAAAAG--TTTAAACATAAAAT-----ACAAAGCTACCATTTTGAAGTTGCATTTCCTTTA-TTACATAATAATTAGATGTATAATTAA-AATATG-T--GGG-TCAAAGGTCAGAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 245846 238 - 4835464 TTTAGAAGCATATCAGACATTCTACC-----TATACAAATGGTATTACATTTTGTTA--ATCTAGTTCTAAATTGTATGTTTAACATCATTCTTCATCAGGATTATTGGGGATATTTTTATTTTTCAATCA-----TAAAACTTTCTAAAAG--TTTAAATAGAAAAT-----ACAAAGCTACCATTTTGAAGTTGCACTTCCTTTA-TTACATGGTAATTAGTTGTATAATTAA-AATATG-T--GGG-TCAAAGATCAGAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704493 238 + 4093027 TTTAGAAGCATATCAGAAATTCTACC-----TATACAAATGGTATTACATTTTGTTA--ATCTAGTTCTAAATTATATGTTTAATATCATTCTACATCAGGATTTTTGGGGATGTTTTCATTTTTCAATCA-----TAAAACTTTCTAAGAG--TTTAAATATAAAAT-----ACAAAGCTACCATTTTGAAGTTGCATTTCCTTTA-TTACATGATAATTAGTTGTATAATTAA-AATATG-T--GGG-TCAAAGTTCAGAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1602637 246 - 9149476 TTTAGGAGCATATCAGACTTCCTACA-----TACAGAGATGACATTACATTTTGTGG--CTTCAGTTCTAAATTGTATGTCTAACATCATTCTACTTTAGCACTATTAGGGATGTTTTTATTTCTCAATAA-----TAAAACTTTCTAAGAG--TTTGAATGTAAAATATAATACGAAGCTGTCATTTTATAGTTGTATCTCTTTTACTTACATGATAATCAGTTCTATAATTAA-AATATGAT--GAGGTCAAAGGTCAGAT i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11039461 234 + 30473821 tttaGGAGCATTTTGGATATCCTGC-------------CTGGTATTACATTCCGCGGGACCTTA-TTTTAAATTTTTTGTCTAACATTATTCTACTTTAGAACTGTTGAGCACGTTTTCATTTTTCAATAA-----TGAAACTTTCTGAGAG--TTTGAATATAAAATA----ATGAGGCTACCATTTTGAAATTGCATCTCCTATG-TTACATAATAATTAGTTGTATAATTAA-AACATGTT--GAGGTCAAAGGTGAGAT i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1770934 241 - 2187301 CTCAGAAGCCTATCGGACATCCTGCCATTAGGAAGTAGGAGATACTACATTCTGATG--CTCTAGTTCTAAATTATATGCCTAATAGTA-----------GAATATTAGGAATGTTTTTATTTTCCAATAATAAAGTAAAACTTTCAAAGATAGTTTAAACATAAAGT-----AATAATGTGCCACTTTGAAGCT--ATCTCTTTTG-CTATATTTACATTAGTTGAGCAATTAACAATATG-TTGGAGATCAAAGTTCATAT i dasNov3.JH563077 C 0 I 502 e eulFla1.LGHW01000501v1 7672 686 + 635616 I e eulMac1.LGHX01000499v1 7536 686 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45739006 1502 - 149736546 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I a score=42320.000000 s hg38.chrUn_KI270749v1 93311 4 + 158759 ATTA s panTro5.chr3 201980553 4 - 202621043 ATTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748554 4 - 205426864 ATTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565083 4 + 86207423 ATTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66048364 4 + 204787373 ATTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980209 4 - 192460366 ATTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092177 4 - 17224310 ATTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404318 4 - 41321030 ATTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478025 4 - 101219884 ATTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860618 4 - 924385 ATTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703874 4 - 10587913 ATTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46026164 4 - 98464013 ACTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708679 4 + 27742158 ATTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246084 4 - 4835464 ATTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704731 4 + 4093027 ATTA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1602883 4 - 9149476 ATTA i micMur3.chr32 C 0 I 299 s otoGar3.GL873534 11039695 4 + 30473821 GTGA i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 7672 686 + 635616 I e eulMac1.LGHX01000499v1 7536 686 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45739006 1502 - 149736546 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1771175 502 - 2187301 I a score=364068.000000 s hg38.chrUn_KI270749v1 93315 42 + 158759 CAATCCAAGGGATATCACAAAG---------------------------GATATTGTA--TTTTTTGCCCC s panTro5.chr3 201980557 42 - 202621043 CAATCCAAGGGATATCACAAAG---------------------------GATATTGTA--TTTTTTGCCCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748558 42 - 205426864 CAATCCAAGGGATATCACAAAG---------------------------GATATTGTA--TTTTTTGCCCC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565087 42 + 86207423 CAATCCAAGGGATATCACAAAG---------------------------GATATTGTA--TTTTTTGCCCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66048368 41 + 204787373 CAATCCAAGGGATATCACAAAG---------------------------GATATTGTA---TTTTTACTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980213 41 - 192460366 CAATCCAAGGGATATCACAAAG---------------------------GATATTGTA---TTTTTACTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092181 41 - 17224310 CAATCCAAGGGATATCACAAAG---------------------------GATATTGTA---TTTTTACTCC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404322 41 - 41321030 CAATCCAAGGGATATCACAAAG---------------------------GATATTGta---tttttactcc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478029 41 - 101219884 CAATCCAAGGGATATCACAAAG---------------------------GATATTGTA---TTTTTACTCC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860622 41 - 924385 CAATCCAAGGGATATCACAAAG---------------------------GATATTGTA---TTTTTACTCC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703878 41 - 10587913 CAATCCAAGGGATATCACAAAG---------------------------GATATTGTA---TTTTTACTCC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46026168 42 - 98464013 CAATCCAAGGGATATCACAAAG---------------------------GATATTGCA--TTTTTTGCCCC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708683 44 + 27742158 CAATCCAAGGGGTATCACAAAG---------------------------GATATTGCATTTTTTTTGCCCC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246088 42 - 4835464 CAATCCAAGGGATATCACAAAA---------------------------GATATTGGA--Ttttttgccct i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704735 42 + 4093027 CAATCGAAGGGATATCACAAAG---------------------------GATATTGCA--TTTTTTGCCCC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11039699 67 + 30473821 CAACCCAAGTGATATTACACAGGTGGAATACAAAATTTTAATTAATATAGATATTGTG----TTTTCCCCT i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 7672 686 + 635616 I e eulMac1.LGHX01000499v1 7536 686 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45739006 1502 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1771175 502 - 2187301 I a score=832325.000000 s hg38.chrUn_KI270749v1 93357 81 + 158759 AAATACGTATA---TTA--ACAGCAATGGCTGTTACACAGAACATTAAACTAA--GAGTCAAATGGAAACTGGAATAACATTTGTTGC s panTro5.chr3 201980599 83 - 202621043 AAATACGTATA---TTA--ACAGCAATGGCTGTTACACAGAACATTAAGCTAAAAGAGTCAAATGGAAACTggaataacatttgttgc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748600 83 - 205426864 AAATACGTATA---TTA--ACAGCAATGGCTGTTACACAGAACATTAAGCTAAAAGAGTCAAATGGAAACTggaataacatttgttgc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565129 83 + 86207423 AAATATGTGTA---TTA--ACAGCAATGGCTGTTACAGAGAACATTAAGCTAAAAGAGCCAAATGGAAACTGGAATAACATTTGTTGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66048409 83 + 204787373 AAATATGTATA---TTA--ACAGCTATGGCTGTTACACAGAACATTAAGCTAAAAGAGTCcaatggaaattggaataacatttgttgc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980254 83 - 192460366 AAATATGTATA---TTA--ACAGCTATGGCTGTTACACAGAACATTAAGCTAAAAGAGTCCAATGGAAATTGGAATAACATTTGTTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092222 83 - 17224310 AAATATGTATA---TTA--ACAGCTATGGCTGTTACACAGAACATTAAGCTAAAAGAGTCcaatggaaattggaataacatttgttgc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404363 83 - 41321030 aaatatgtata---tta--acagctatggttgttacacagaacattaagctaaaagagtcaaatggaaattggaataacatttgttgc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478070 83 - 101219884 AAATATGTATA---TTA--ACAGCTATGACTGTTACACAGAACATTAAGCTAAAAGAGTCAAATGGAAATTGGAATAACATTTGTTGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860663 83 - 924385 AAATATGTATA---TTA--ACAGCTATGGTTGTTACACAGAACATTAAGCTAAAAGAGTCAAATGGAAATTggaataacatttgttgc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6703919 83 - 10587913 AAATATGTATA---TTA--ACAGCTATGGCTGTTACACAGAACATTAAGCTAAAAGAGTCAAATGGAAATTGGAATAACATTTGTTGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46026210 83 - 98464013 AAATATGTGTA---CTA--ACAGCAATGTCTGTTACACAGAACCTTAAGTTAAAAGAGTCAAATGGAAACTGGCATAACATTTGTTGC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708727 83 + 27742158 AAATATGTGTA---CTA--ACAGCAATGTCTGTAACACAGAACATTAAGTTAAAAGAGTCAAATGGAAACTGGCATAACATTTGTTGC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246130 83 - 4835464 aaatatgtgta---cta--accgcaatgtctgttacacagaacattaagttaaaagagtcaaatggaaactggcataacatttgttgc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704777 83 + 4093027 AAATACGTGTA---CTA--ACAGCAAAGTCTGTTACACAGAACATTACGTTAAAAGAGTCAAATGGAAACTggcataacatttgttgc i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11039766 86 + 30473821 AAAGATACACATTTTTA--ACATAAATGCCTGCTACATAGAACATTAAACTGAAACAGTTAAATGGAGCTTGGAACAATATTTGTTGC i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1771677 82 - 2187301 AAAGATGTATA---TTGTTACATCAATGTCTGTTACACAGAACATTGAGCTGAGTTTGTCAAATGAAGACTGGAGTAACACTTAC--- i dasNov3.JH563077 I 502 C 0 e eulFla1.LGHW01000501v1 7672 686 + 635616 I e eulMac1.LGHX01000499v1 7536 686 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45739006 1502 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I a score=834967.000000 s hg38.chrUn_KI270749v1 93438 86 + 158759 AAATAATAGGTATAGTGAAATTTCAAGATGATTCTGAAAATATTTTATTTATCTGAACTTATGATAA---CATATCTGAGTGAATAACT s panTro5.chr3 201980682 86 - 202621043 aaataataggtatagtgaaatttcaagatgattctgaaaatattttatttatctgaacttatgataa---catatctgagtgaataact i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748683 86 - 205426864 aaataataggtatagtgaaatttcaagatgattctgaaaatattttatttatctgaacttatgataa---catatctgagtgaataact i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565212 86 + 86207423 AAATAATAGGTATAGTGAAATTTCAAGATGATTCTGAAAATATTTTTTTTATCTAAACTTACAATAA---CAAATCTTAGTGAATAACT i nomLeu3.chr21 C 0 I 2 s rheMac8.chr2 66048492 86 + 204787373 aaataagaggtatagtgaaatttcaagatgattctgaaaatattttatttatctggacttatgataa---caaatcttagagaataact i rheMac8.chr2 C 0 I 2 s macFas5.chr2 60980337 86 - 192460366 AAATAAGAGGTATAGTGAAATTTCAAGATGATTCTGAAAATATTTTATTTATCTGGACTTATGATAA---CAAATCTTAGAGAATAACT i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11092305 86 - 17224310 aaataagaggtatagtgaaatttcaagatgattctgaaaatattttatttatctgaacttatgataa---caaatcttagagaataact i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17404446 86 - 41321030 aaataagaggtatagtgaaatttcaagatgattctgaaaatattttatttatctggacttatgataa---caaatcttagagaataact i cerAty1.NW_012009469v1 C 0 I 2 s chlSab2.chr22 64478153 86 - 101219884 AAATAAGAGGTATAGTGAAATTTCAAGATGATTCTGAAAATATTTTATTTATCTGGACTTATGATAA---CAAATCTTAGAGAATAACT i chlSab2.chr22 C 0 I 2 s manLeu1.NW_012098965v1 860746 86 - 924385 aaataagaggtatagtgaaatttcaagatgattctgaaaatattttatttatctggacttatgataa---caaatcttagagaataact i manLeu1.NW_012098965v1 C 0 I 2 s colAng1.NW_012114711v1 6704002 86 - 10587913 AAATAAGAAATATAGTGAAATTTCAAGATGATTCTGAAAATATTTTATTTATCTGGACTTATGATAA---CAAATCTTAGAGAATAACT i colAng1.NW_012114711v1 C 0 I 2 s calJac3.chr15 46026293 86 - 98464013 AAATAAGAGGCATAGTGAAATTTCAAGATGATTCTGAAAATATTTTATTTATCTTAACTTATAAGAA---GAAATCTTAATGAATAATT i calJac3.chr15 C 0 I 2 s saiBol1.JH378125 27708810 86 + 27742158 AAATAAGAGGCATAGTGAAATTTCAAGATGATTCTGAAAATATTTTATTTATCCGAACTTACAAGAA---GAAATCTTAATGAATAATT i saiBol1.JH378125 C 0 I 2 s cebCap1.NW_016107467v1 246213 81 - 4835464 aaataagaggcatagtgaaatttcaagatgattctgaaaa-----tatttatctgaacttacaagaa---gaaatcttaatgaataatt i cebCap1.NW_016107467v1 C 0 I 2 s aotNan1.NW_018502033v1 3704860 86 + 4093027 aaataagaggcatagtgaaatttcaagatgattctgaaaatattttatttatctgaacttacaagaa---gaaattttaatgaataatt i aotNan1.NW_018502033v1 C 0 I 2 s otoGar3.GL873534 11039852 84 + 30473821 AGGTAAGAGAGGTAGGGAACTTCCAAGATGGTTGTGAAAATATTTTACTTATCCAAA--TATGAGAA---CAAATCTTCCCAAATCATT i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45740508 78 - 149736546 AAAGAAAAGGAAAAGGAAAACTTCAGGGTCATTATGAACATGTGCTATTTATAAAAACTCATAAT-----------TTTGTACACAACT i mm10.chr6 I 1502 I 2 s dasNov3.JH563077 1771759 82 - 2187301 AGGTAAGAGATAT-----ACTTTCAAGTTGGCTGTGGGAAT-TCTTTTTTACCAGAATTTATGAGAATTTTATATCTTA-TGAGTAATT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 7672 686 + 635616 I e eulMac1.LGHX01000499v1 7536 686 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I a score=156049.000000 s hg38.chrUn_KI270749v1 93524 10 + 158759 --GAGAGTGCAT s panTro5.chr3 201980768 10 - 202621043 --gagagtgcac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748769 10 - 205426864 --gagagtgcac i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565300 10 + 86207423 --GAGAGTGCAC i nomLeu3.chr21 I 2 C 0 s rheMac8.chr2 66048580 10 + 204787373 --gagagtgcac i rheMac8.chr2 I 2 C 0 s macFas5.chr2 60980425 10 - 192460366 --GAGAGTGCAC i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11092393 10 - 17224310 --gagagtgcac i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17404534 10 - 41321030 --gagagtgcac i cerAty1.NW_012009469v1 I 2 C 0 s chlSab2.chr22 64478241 10 - 101219884 --GAGAGTGCAC i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 860834 10 - 924385 --gagagtgcac i manLeu1.NW_012098965v1 I 2 C 0 s colAng1.NW_012114711v1 6704090 10 - 10587913 --GAGAGTGCAC i colAng1.NW_012114711v1 I 2 C 0 s calJac3.chr15 46026381 10 - 98464013 --GAGAGTGCAC i calJac3.chr15 I 2 C 0 s saiBol1.JH378125 27708898 10 + 27742158 --GAGAGTGCAC i saiBol1.JH378125 I 2 C 0 s cebCap1.NW_016107467v1 246296 10 - 4835464 --gagagtgcac i cebCap1.NW_016107467v1 I 2 C 0 s aotNan1.NW_018502033v1 3704948 10 + 4093027 --gagagtgcac i aotNan1.NW_018502033v1 I 2 C 0 s eulMac1.LGHX01000499v1 8222 10 + 631505 --GAGAGTGCAC i eulMac1.LGHX01000499v1 I 686 I 7164 s eulFla1.LGHW01000501v1 8358 10 + 635616 --GAGAGTGCAC i eulFla1.LGHW01000501v1 I 686 I 7164 s otoGar3.GL873534 11039938 10 + 30473821 --GAAAGTGCAC i otoGar3.GL873534 I 2 C 0 s mm10.chr6 45740588 10 - 149736546 --AACAGTGAAG i mm10.chr6 I 2 C 0 s dasNov3.JH563077 1771841 12 - 2187301 AAGACAGTACAC i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I a score=295461.000000 s hg38.chrUn_KI270749v1 93534 28 + 158759 TCAAGGAAGTAAATAGCTCTATT-AAAAC s panTro5.chr3 201980778 28 - 202621043 tcaaggaagtaaatagctctatt-aaaac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748779 28 - 205426864 tcaaggaagtaaatagctctatt-aaaac i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565310 28 + 86207423 TCAAGGAAGTAAATAGCTCTATT-AAAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66048590 29 + 204787373 tcaaggaagtaaatagctctattaaaaac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980435 29 - 192460366 TCAAGGAAGTAAATAGCTCTATTAAAAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092403 29 - 17224310 tcaaggaagtaaatagctctattaaaaac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404544 28 - 41321030 tccaggaagtaaatagctctatt-aaaac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478251 28 - 101219884 TCAAGGAAGTAAATAGCTCTATT-AAAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860844 28 - 924385 tcaaggaagtaaatggctctatt-aaaac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704100 28 - 10587913 TCAAGGAAGTAAATAGCGCTATT-AAAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46026391 28 - 98464013 TCAAGGAATTAAATAGCTCTATT-AAAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708908 28 + 27742158 TCAAAGAATTAAATAGCTCTATT-AAAAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246306 28 - 4835464 tcaaggaattaaatagctctatt-aaaac i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704958 28 + 4093027 tcaaggaattaaatagctctatt-aaaac i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11039948 25 + 30473821 ---AGGAAGTAAATGGCTCTACT-CAAAC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45740598 27 - 149736546 -TCAGAAAACAAGGAGGCCTGCT-CAGAC i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1771853 28 - 2187301 TCCAAGCAATAAATAGCTTTACT-CAAAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1359438 2178 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I a score=47124.000000 s hg38.chrUn_KI270749v1 93562 4 + 158759 AGTC s panTro5.chr3 201980806 4 - 202621043 agta i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748807 4 - 205426864 agta i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565338 4 + 86207423 AGTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66048619 4 + 204787373 agta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980464 4 - 192460366 AGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092432 4 - 17224310 agta i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404572 4 - 41321030 agta i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478279 4 - 101219884 AGTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860872 4 - 924385 agta i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704128 4 - 10587913 AGta i colAng1.NW_012114711v1 C 0 I 209 s rhiRox1.KN296641v1 1361616 4 - 1467263 aGTA i rhiRox1.KN296641v1 I 2178 C 0 s calJac3.chr15 46026419 4 - 98464013 AGCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708936 4 + 27742158 AGTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246334 4 - 4835464 agta i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704986 4 + 4093027 agta i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11039973 4 + 30473821 AATA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45740625 4 - 149736546 AGCA i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1771881 2 - 2187301 --TG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e micMur3.chr32 1602887 299 - 9149476 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I a score=53003.000000 s hg38.chrUn_KI270749v1 93566 5 + 158759 ACCTG s panTro5.chr3 201980810 5 - 202621043 acctg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748811 5 - 205426864 acctg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565342 5 + 86207423 ACCTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66048623 5 + 204787373 acctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980468 5 - 192460366 ACCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092436 5 - 17224310 acctg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404576 5 - 41321030 acctg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478283 5 - 101219884 GCCTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860876 5 - 924385 acctg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704341 5 - 10587913 ACCTG i colAng1.NW_012114711v1 I 209 C 0 s rhiRox1.KN296641v1 1361620 5 - 1467263 ACCTG i rhiRox1.KN296641v1 C 0 I 637 s calJac3.chr15 46026423 5 - 98464013 ACCTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708940 5 + 27742158 ACCTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246338 5 - 4835464 actta i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704990 5 + 4093027 accta i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11039977 5 + 30473821 GCCCA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45740629 5 - 149736546 GTCTA i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1771883 5 - 2187301 GTCCA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e micMur3.chr32 1602887 299 - 9149476 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I a score=1052793.000000 s hg38.chrUn_KI270749v1 93571 105 + 158759 ATGATGAAGACTCAAC------AAATGAAGACAGTGATATCCATGGATGCCTTTCAG-ACACTGTGTTATTCTTTGGTGGTGACTCCATTATTCTTTATGAATAATACAATT s panTro5.chr3 201980815 105 - 202621043 atgatgaagactcaac------aaatgaagacagtgatatctgtggatgcctttcag-accctgtgttattctttggtggtgactccattattctttatgaataatacaatt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748816 105 - 205426864 atgatgaagactcaac------aaatgaagacagtgacatctgtggatgcctttcag-acactgtgttattctttggtggtgactccattattctttatgaataatacaatt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565347 105 + 86207423 ATGACGAAGACTCAAC------AAATGAAGACAGTGATATCCGTGGATGCCTTTCAG-ACACTGTGTTATTCTTTGGTGGTGACTCCACTATTCTTTATGAATAACACAATT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66048628 105 + 204787373 atgatgaagactcaac------aaatgaagacaatgatatccgtggatgcttttcag-acactctgttattctttggtggtgactccactattctttatgaataatacaatt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980473 105 - 192460366 ATGATGAAGACTCAAC------AAATGAAGACAATGATATCCGTGGATGCTTTTCAG-ACACTCTGTTATTCTTTGGTGGTGACTCCACTATTCTTTATGAATAATACAATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092441 105 - 17224310 atgatgaagactcaac------aaatgaagacaatgatatccgtggatgcttttcag-acactctgttattctttggtggtgactccactattctttatgaataatacaatt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404581 105 - 41321030 atgatgaagactcaac------aaatgaagacaatgatatctgtggatgcctttcag-acactctgttattctttggtggtgactccactattctttatgaataatacaatt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478288 105 - 101219884 ATGATGAAGACTCAAC------AAATGAAGACAATGATATCCGTGGATGCTTTTCAG-ACACACTGTTCTTCTTTGGGGGTGACTCCACTATTCTTTATGAATAATACAATT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860881 105 - 924385 atgatgaagactcaac------aaatgaagacaatgatatctgtggatgcctttcag-acactctgttattctttggtggtgactccactattctttatgaataatacaatt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704346 111 - 10587913 ATGATGAAGACTCAACAAATGAaaatgaagacagtgatatccgtggatgctttgcag-acactctgttatactttgggggtgactccactattctttatgaataatacaatt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46026428 103 - 98464013 ATGATGAAGAGGTAAC------AAATGAAGACAGTGATAACTGTGGATGCTTTTCCA-ACAC--TGTTATTCCTTGGTGGTGACTACACTAATCATTATCAATAATACAATT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27708945 105 + 27742158 ATAATGAAGAGTCAAC------AAATGAAGTCATTGATAACTGTGGATGCTTTTCAG-ACACTGTGTTATTCCTTGGTGGTGACTACACTATTCTTTATCAGTAATACAATT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246343 105 - 4835464 atgatgaagggtcaac------aaatgaagacagtgataactgtggatgcttttcag-acactgtgttattccttggtggtgactacactattctttatcaataatacaatt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3704995 105 + 4093027 atgaggaagagtcaac------aaatgaagacagtgataactgtggatgcttttcag-acactgtgttattccttggtcgtgactacactattctttatcaataatacaatt i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11039982 89 + 30473821 ATAATGGAGGGTAAAC------AAACAAGGACCGAGACAATTGTGAATGCTTTTTAA-ACATT---TTATGCTATTGAGGTGAAGAGACTATTATTT-------------TT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45740634 98 - 149736546 ATAATGAAAGATCAAC------ACCCAAGGACAATGGTGGCCATGTATGCTTTCCAG-ACACTAT-------CATGTTAGGCACGCCACTATTTCTTAGCAATAATGAAATT i mm10.chr6 C 0 I 10290 s dasNov3.JH563077 1771888 106 - 2187301 TTGATGAAGAGTCAAA------AAATGAAGATAGTAATAACTTTGGATGCTTTTCAGAACACTGTCCTGCTCTCTGGTAGTGATTTCAATATTATTTATCAATAACACAGTG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1361625 637 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I a score=124624.000000 s hg38.chrUn_KI270749v1 93676 11 + 158759 AGTGCAATTTT s panTro5.chr3 201980920 11 - 202621043 agtgcaatttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748921 11 - 205426864 agtgcaatttt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565452 11 + 86207423 AATGCAATTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66048733 11 + 204787373 agtgcaatttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980578 11 - 192460366 AGTGCAATTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092546 11 - 17224310 agtgcattttt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404686 11 - 41321030 agtgcaatttt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478393 11 - 101219884 AGCGCAATTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860986 11 - 924385 agtgcaatttt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704457 11 - 10587913 agtgcaatttt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46026531 11 - 98464013 AGTGCAATTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27709050 11 + 27742158 AGTGCAATTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246448 11 - 4835464 agtgcaatttt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3705100 11 + 4093027 agtgcaatttt i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11040071 11 + 30473821 AATGCAGTTTT i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1771994 11 - 2187301 GGTACAATTTT i dasNov3.JH563077 C 0 I 9386 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1361625 637 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I a score=2539839.000000 s hg38.chrUn_KI270749v1 93687 276 + 158759 GAGTCTTTCCATCCTTGCCAATTATCCTAACACTGGAAAATTTTCTGTTTAACACAAAaatactaagaactcatttgagagtatcttcactgagtggtttatcaagcactggaatagctccagacttaggagttaaatacttcccaagagaattcagtccactctaatatcacttcggtgt--------tagaaaaaatacccttgcactgacttgaaaattatatccatagatcttttatccatgacacctggggtcacaaag-aaaaaAtatttttcttattc s panTro5.chr3 201980931 276 - 202621043 gagtccttccatccctgccaattatcctaacactggaaaattttctgtttaacacaaaaatactaagaacTCATTTGAgagtatcttcactgagtggtttatcaagcactggaatagctccagaattaggagttaaatacttcccaagagaattcagtccactctaatatcacttcggtgt--------tagaaaaaatacccttgcactgacttgaaaattatatccatagatcttttatccatgacacctggggtcacaaag-aaaaaAtatttttcttattc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204748932 275 - 205426864 gagtccttccatccctgccaattatcctaacactggaaaattttctgtttaacacaaaaatactaagaacTCATTTGAgagtatcttcactgagtggtttatcaagcactggaatagctccagaattaggagttaaatacttcccaagagaattcagtccactctaatatcacttcggtgt--------tagaaaaaatacccttgcactgacttgaaaattatatccatagatcttttatccatGACACCTGGGGTCACaaag--aaaaatatttttcttattc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565463 277 + 86207423 GAGTCCTTCCGTCCCTGCCAATTATCCTAACACTGGAAAATTTTCTGTTTAACACAAAAATATTAAGAACTCATTTGGGAGTATCTTCACTGagtggtttatcaagcactggaatagctccagaagtaggagctaaatacttcccaagagaattcagtccactctagtatcacttcggtgt--------tagaaaaaatacctttgcacagacttgaaaattatatccatagatcttttatccatgacacctggggtcacagagaaaaaAAtatttttcttattc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66048744 276 + 204787373 gagtcctttcatccctgccaattatcctaatattggaaaattttctgtttaacacaaaaatattaagaacTCATTTGAgagtatcttcactgagtggtttatcaagcactagaatagctccagaagtaggagttaaatacttcccaagagaattcagtccattctaatatcatttcagtgt--------tagaaaaaacacccttgcactgacttgaaaattatattcctagatcttttatccaGGACACTTGGGGTCACAGAG-AAAAAAtatttgtcttattc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980589 276 - 192460366 GAGTCCTTTCATCCCTGCCAATTATCCTAATATTGGAAAATTTTCTGTTTAACACAAAAATATTaagaactcatttgagagtatcttcactgagtggtttatcaagcactagaatagctccagaagtaggagttaaatacttcccaagagaattcagtccactctaatatcatttcagtgt--------tagaaaaaacacccttgcactgacttgaaaattatattcctagatcttttatccaGGACACTTGGGGTCACAGAG-AAAAAAtatttgtcttattc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092557 276 - 17224310 gagtcctttcatccctgccaattatcctaatattggaaaattttctgtttaacacaaaaatattaagaacTCATTTGAgagtatcttcactgagtggtttatcaagcactagaatagctccagaagtaggagttaaatacttcccaagagaattcagtccactctaatatcatttcagtgt--------tagaaaaaacacccttgcactgacttgaaaattatattcctagatcttttatccaGGACACTTGGGGTCACAGAG-AAAAAAtatttgtcttattc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404697 276 - 41321030 gagtcctttcatccctgccaactatcctaatattggaaaattttctgtttaacacaaaaatattaagaacTCATTTGAGAGTATCTTCACTGagtggtttatcaagcactagaatagctccagaagtagtagttaaatacttcccaagagaattcagtccactctaatatcatttccgttt--------tagaaaaaacacccttgcactgacttgaaaattatgctcctagatcttttatccaGGACACTTGGGGTCACAGAG-AAAAAAtatttgtcttattc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478404 276 - 101219884 GAGTCCTTCCATCCCTGCCAATTATCCTAATACTGGAAAATTTTCTGTTTAACACAAAAATATTaagaacttatttgagagtatcttcactgagtggtttatcaagcactggaatagcttcagaagtaggagttaaatacttcccaagagaattcagtccactctaatatcatttcggtgt--------tagaaaaaacacccttgtactgacttgaaaattatattcctagatcttttatccaGGACACTTGGGGTCACAGAG-AAAAAAtatttgtcttattc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 860997 276 - 924385 tagtcctttcatccctGCCAACTATCCTAATATTGGAAAATTTTCTGTTTAACACAAAAATATTaagaactcatttgagagtatcttcactgagtggtttatcaagcactagaatagctccagaagtagtagttaaatacttcccaagagaattcagtccactctaatatcatttcagttt--------tagaaaaaacacccttgcactgacttgaaaattatattcctagatcttttatccaGGACACTTGGGGTCACAGAA-AAAAAAAatttgtcttattc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704468 277 - 10587913 gagtccttccatccttgccaattatcctaatattggaaaattttctgtttaacacaaaaatattaagaacTCATTTGAgagtatcttcactgagtggtttatcaagcactggaatagctccagaagtaggagttaaatacttcccaagagaattcagtccactctaatatcattttggtgt--------tagaaaaaaaacccttgcactgacttgaaaattgtattcctagatcttttatccaGGACACCTGGGGTCACAGAGAAAAAAAtatttgtcttattc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46026542 273 - 98464013 GAGTCCTTCCATCCCTGCCAATTATCCAAATATTGGATTTTTTTCTGTTTAACATATAAATATTAAGAACTTATCTGAGAGTATCTTCACTGagtggtttatcaagtacatgaatagcttcacaagtaggagctaaatacttccc---agaattcattttactctaatatcatttcagtgt--------tagagaaaacacccttacactgacttgaaaattatatctttagatctttcatccatgacccctggggtcacagag-aaaaaAtatttctattattc i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27709061 276 + 27742158 GAGTCCTTCCATCCCTGCCAATGATCCAAATATTGGATTCTTTTCTGTTTAACATATAAATATTaagaacttatttgagaatatcttcactgagtggtttatcaagtacttgaatagctccacaagtaggagctaaatacttcccaagagaattcattccactctaatattatttcagtgt--------tagaaaaaatacccttacactgacttgaaaattatatctttagatctttcatccatgactcctggGGTCACAGGC-AAAAAAtatttctattattc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246459 276 - 4835464 gagtccttcgatccctGCCAATTATCCAAATATTGGATTCTTTTCTGTTTAACATATAAATATTaagaacttatttgagagcatcttcactgagtggtttatcaagtacttgaatagctccacgagtaggagctaaatatttcccaagagaattcattccactctaatatcatttcagtgt--------tagaaaaaatacccttacactgacttgaaaattatatctttagatctttcatccatgacccctggggtcacagag-aaaaaAtatttctattattc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3705111 276 + 4093027 gagtccttccatccctGCCAATTATCCAAATATTGGATTCTTTTCTGTTTAGCATATAAATATTAAGAACTTATTTGAGAGTATCTtcactgagtagtttatcaagtacttgactagctccacaagtaggagctaaatacttcccaagagaattcattccactctaatatcatttcagtgt--------tagaaaaaacacccttacactgacttgaaaattatatctttagatctttcatccatgacccctggggtcacagag-aaaaaAtatttctattattc i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11040082 280 + 30473821 T-GTCTTTTCATCTCTGTTGATTATCCTAATATTCGAAAATTTGCTTTTTAATGTAAAAATGTTAAAAATGCATGTAAAAGTGTCTTCA-TGAGTGGTTTGTCAAAtgctggaatagcttcaaaagtaggatccaaatatttcctaagatatttcattgtactctgataccatttgattgtcacacacacacaaaaaaaagccttataacaacttgaaatttatagccttgggtctttcatccctaacctctggg--cacatag-aaaaaatatatgtctatttc i otoGar3.GL873534 C 0 I 7224 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1361625 637 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=747017.000000 s hg38.chrUn_KI270749v1 93963 103 + 158759 ttaattgatatacaaatagaagtgtgctcaaaatagtagcaacaatgtatttcattacatatgcttttatatataatatatatata-aatttcatata---tattac s panTro5.chr3 201981207 103 - 202621043 ttaattgatctacaaatagaagtgtgctcaaaatagtagcaacaatgtatttcattacatatgcttttatatataatatatatata-aatttcatata---tattac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204749207 103 - 205426864 ttaattgatctacaaatagaagtgtgctcaaaatagtagcaacaatgtatttcattacatatgctcttatatataatatatatata-aatttcatata---tattac i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565740 103 + 86207423 ttaactgatctacaaatagaagtgtgctcaaaacagtagcaacaatgtatttcattacatatgcttttatatataatatatataaa-aatttcatata---tattag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049020 103 + 204787373 ttaatcggtctacaaatagaagtgtgctcaaaatagtagcaacaatatatttcattacatatgcttttatatataatatatat----aatttcatatatAATATTAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980865 103 - 192460366 ttaatcgatctacaaatagaagtgtgctcaaaatagtagcaacaatatatttcattacatatgcttttatatataatatatat----aatttcatatatAATATTAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092833 103 - 17224310 ttaatcgatctacaaatagaagtgtgctcaaaatagtagcaacaatatatttcattacatatgcttttatatataatatatat----aatttcatatatAATATTAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17404973 103 - 41321030 ttaatcgatctacaaatagaagtgtgctcaaaatagtagcaacaatatatttcattacatatgctttcatatataatatatat----aatttcatatatAATATTAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478680 104 - 101219884 ttaattgatctacaaatagaagtgtgctcaaaatagtagcaacaatatatttcattacatatgcttttatatataatatatata---attttcatataCAATATTAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 861273 107 - 924385 ttaattgatctacaaatagaagtgtgctcaaaatagtagcaacaatatatttcattacatatgcttttacatattttatatatatataatttcatatatAATATTAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704745 106 - 10587913 ttaattgatctaaaaatagaagtgtgctcaaaatagtagcaacaatatatttcattacatatgcttttatatataatatatatata-tttttcatatatAGTATTAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46026815 102 - 98464013 ttaattgatctacaaataacagttttctcaaaatagtagcaacaatatatttcattacatgtg-ttttatataatacatatataaa-aatctcatata---tacAAC i calJac3.chr15 C 0 I 7 s saiBol1.JH378125 27709337 102 + 27742158 ttaattgatctgcaaacaacagttttctcaaaatagtagcaacagtgtatttcattatgtgtg-ttttatataatacatatataAA-AAGTGCATACA---TATAAC i saiBol1.JH378125 C 0 I 7 s cebCap1.NW_016107467v1 246735 102 - 4835464 ttaattgatctacaaataacagctttctcaaaatagtagcaacaaggtatttcattacatgtg-ttttatataatatatatataAA-AATctcataca---tataac i cebCap1.NW_016107467v1 C 0 I 36 s aotNan1.NW_018502033v1 3705387 102 + 4093027 ttaattgatctacaaataacagttttctcagaatagtagcaacaatgtatttcattacatgtg-ttttatataatacatatataaa-aatctcataca---tatttc i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1361625 637 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=57967.000000 s hg38.chrUn_KI270749v1 94066 7 + 158759 atataTA s panTro5.chr3 201981310 7 - 202621043 atataTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204749310 7 - 205426864 atataTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565843 7 + 86207423 atataTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049123 7 + 204787373 ATATATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980968 7 - 192460366 ATATATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092936 7 - 17224310 ATATATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405076 7 - 41321030 ATATATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478784 7 - 101219884 ATATATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 861380 7 - 924385 ATATATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704851 7 - 10587913 ATATATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46026924 7 - 98464013 atatata i calJac3.chr15 I 7 C 0 s saiBol1.JH378125 27709446 7 + 27742158 ATATATA i saiBol1.JH378125 I 7 C 0 s aotNan1.NW_018502033v1 3705489 7 + 4093027 atatata i aotNan1.NW_018502033v1 C 0 I 32 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1361625 637 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e cebCap1.NW_016107467v1 246837 36 - 4835464 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=81937.000000 s hg38.chrUn_KI270749v1 94073 20 + 158759 CA--TTTTATTACACATGTGAT s panTro5.chr3 201981317 20 - 202621043 CA--TTTTATTACATATGTGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204749317 20 - 205426864 CA--TTTTATTACATATGTGAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565850 19 + 86207423 T---TTTTATTAGATATGTGAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049130 22 + 204787373 AAATTTTTATTACATATATGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980975 22 - 192460366 AAATTTTTATTACATATATGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092943 20 - 17224310 AAATTTTTATTAC--ATATGAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405083 22 - 41321030 AAATTTTTATTACATATATGAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478791 22 - 101219884 AAATTTTTATTACATATATGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 861387 22 - 924385 AAATTTTTATTACACATATGAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704858 22 - 10587913 AAATTTTTATTACATATATGAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46026931 20 - 98464013 --aatagtattacatatgtaag i calJac3.chr15 C 0 I 2 s saiBol1.JH378125 27709453 20 + 27742158 --AATAGTATTACATATGTAAG i saiBol1.JH378125 C 0 I 2 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1361625 637 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e aotNan1.NW_018502033v1 3705496 32 + 4093027 I e cebCap1.NW_016107467v1 246837 36 - 4835464 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=820055.000000 s hg38.chrUn_KI270749v1 94093 109 + 158759 TATGTAATAAAATATATTGATGCTACTATTATGTTATTTtatgagtgcttatatataagcacttatatatgcttatatattag----tgaatgatagcaatgataaaagtgac s panTro5.chr3 201981337 106 - 202621043 TATGTAATAAAATATATTGATGCTA---TTATGTTATTTtatgagtgcttatatataagcacttatatatgcttatatattag----tgaatgatagcaatgataaaagtgac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204749337 106 - 205426864 TATGTAATAAAATATATTGATGCTA---TTATGTTATTTtatgagtgcttatatataagcacttatatatgcttatatattag----tgaatgatagcaatgataaaagtgac i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565869 109 + 86207423 TATGTAATAAATTATATTGATGCTACTATTATGTTATTTTTTGAGTGCTTACATAAAAGCActtatatatgcttatatattag----tgaatgacagcaatgataaaagtgac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049152 109 + 204787373 TATGTAACAAAGTATATTGATGCTACTATTATGTTATTTtatgagtgcttatatataagcacttatatatgcttacatattag----tgaatgatagcaatgataaaagtgac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60980997 109 - 192460366 TATGTAACAAAGTATATTGATGCTACTATTATGTTATTTtatgagtgcttatatataagcacttatatatgcttacatattag----tgaatgatagcaatgataaaaatgac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11092963 109 - 17224310 TATGTAACAAAGTATATTGATGCTACTATTATGTTATTTtatgagtgcttatatataagcacttatatgtgcttacatattag----tgaatgatagcaatgataaaagtgac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405105 109 - 41321030 TATGTAACAAAGTATATTGATGCTACTATTATGTTATTTtatgagtgcttatatataaacacttatatatgcttatatattag----tgaatgatagcaatgataaaagtgac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478813 109 - 101219884 TATATAACAAAGTATATTGATGCAACTATTATGTTATTTtatgagtgcttatatataagcacttatatatgcttacatattag----tgaatgatagcaatgataaaagtgac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 861409 109 - 924385 TATGTAACAAAGTATATTGATGCTACTATTATGTCATTTtatgagtgcttatatataagcacttatatatgcttacatattag----tgaatgatagcaatgataaaagtgac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704880 104 - 10587913 TATGTAACAAGATATATTGATGCTACTATT-----ATTTtatgagtgcttgtatataagcacttgtatatgcttacatattag----tgaatgatagcaacgataaaagtgac i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46026953 105 - 98464013 tatgtaattaaatatattgctgctactat--tgttA---TATAAATGCTtatatataagtacttgtatatacttatatattagtgaatgaatgat---aatgataaaagtgac i calJac3.chr15 I 2 C 0 s saiBol1.JH378125 27709475 110 + 27742158 TATGTAATTACATATATTGCTGCTACTAttatgtta---tatgaatgcttatagataagtacttatatatgattacatattagtgaatgaatgataacaatgataaaagtgac i saiBol1.JH378125 I 2 C 0 s cebCap1.NW_016107467v1 246873 105 - 4835464 tatgtaattaaatatattgctgctactat-----ta---tttGAATGCTtatatataagtacttatatatgcttatatattactgaatgaatgataaaaatgataaaagtgac i cebCap1.NW_016107467v1 I 36 C 0 s aotNan1.NW_018502033v1 3705528 106 + 4093027 TATGTAAGTAAATATATTGCTGCTACTAttatgtta---tatgaatgcttatatataagtacttatatatgcttata----agtgaatgaatgataacaatgataaaagtgac i aotNan1.NW_018502033v1 I 32 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1361625 637 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69635704 2616 + 202140232 I e rhiBie1.NW_016820128v1 1213949 2802 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=43146.000000 s hg38.chrUn_KI270749v1 94202 3 + 158759 aag s panTro5.chr3 201981443 3 - 202621043 aag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204749443 3 - 205426864 aag i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69638320 3 + 202140232 aag i ponAbe2.chr3 I 2616 I 626 s nomLeu3.chr21 67565978 3 + 86207423 aag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049261 3 + 204787373 aag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60981106 3 - 192460366 aag i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11093072 3 - 17224310 aag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405214 3 - 41321030 aag i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478922 3 - 101219884 aag i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 861518 3 - 924385 aag i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704984 3 - 10587913 aag i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1362262 3 - 1467263 aag i rhiRox1.KN296641v1 I 637 I 2676 s rhiBie1.NW_016820128v1 1216751 3 - 2311269 aag i rhiBie1.NW_016820128v1 I 2802 I 2375 s calJac3.chr15 46027058 3 - 98464013 aag i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27709585 3 + 27742158 aag i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246978 3 - 4835464 aag i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3705634 3 + 4093027 aag i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=4682.000000 s hg38.chrUn_KI270749v1 94205 1 + 158759 g s panTro5.chr3 201981446 1 - 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chr3 204749446 1 - 205426864 g i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565981 1 + 86207423 g i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049264 1 + 204787373 g i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60981109 1 - 192460366 g i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11093075 1 - 17224310 g i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405217 1 - 41321030 g i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478925 1 - 101219884 g i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 861521 1 - 924385 g i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704987 1 - 10587913 g i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46027061 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27709588 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246981 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3705637 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e papAnu3.chr2 59538032 2674 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638323 626 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=32955.000000 s hg38.chrUn_KI270749v1 94206 3 + 158759 agg s panTro5.chr3 201981447 3 - 202621043 agg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204749447 3 - 205426864 agg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565982 3 + 86207423 agg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049265 3 + 204787373 agg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60981110 3 - 192460366 agg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11093076 3 - 17224310 agg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405218 3 - 41321030 agg i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59540706 3 + 187378091 aga i papAnu3.chr2 I 2674 I 633 s chlSab2.chr22 64478926 3 - 101219884 agg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 861522 3 - 924385 agg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704988 3 - 10587913 agg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46027062 3 - 98464013 agg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27709589 3 + 27742158 agg i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246982 3 - 4835464 agg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3705638 3 + 4093027 agg i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638323 626 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=1414757.000000 s hg38.chrUn_KI270749v1 94209 170 + 158759 gaagaattatgattattttattattttaaggtactcacacactacctgtgaagtggtataatgttgtttgaacatggattttaattagttataaatgtatcttggaaactctagtgcaaccactgagaaatgt-aaaaaagaagcataactgataggctaataataaggga s panTro5.chr3 201981450 170 - 202621043 gaagaattatgattattttattattttaaggtactcacacactacctgtgaagtggtataatgttgtttgaacatggattttaattagttataaatgtatcttggaaactctagtgcaaccactgagaaatgt-aaaaaagaagcataactgatatgctaataataaggga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204749450 170 - 205426864 gaagaattatgattattttattattttaaggtactcacacactacctgtgaagtggtataatgttgtttgaacatggattttaattagttataaatgtatcttggaaactctagtgcaaccactgagaaatgt-aaaaaagaagcataactgatatgctaataataaggga i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67565985 169 + 86207423 gaagaattatgattattttattattacaaggtactcatatgctacctgtgaagtggtaaaatgttgtttgaacatggattttaattagttataaatgtatcttggaaactctagtgcaaccactgagaaatgt--aaaaagaagcataactgatatgctaataataaggga i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049268 171 + 204787373 gaagaattatgattattttattattataaggtactcacacactacctgtggagtggtataatgttgtttgactatggattttaattagttataaatgtatattggaaactctggtgcaaccactgagaaatgtaaaaaaggaagcatacttgatatgctaataataaagga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60981113 171 - 192460366 gaagaattatgattattttattattataaggtactcacacactacctgtggagtggtataatgttgtttgactatggattttaattagttataaatgtatattggaaactctggtgcaaccactgagaaatgtaaaaaaggaagcatacttgatatgctaataataaagga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11093079 171 - 17224310 gaagaattatgattattttattattataaggtactcacacactacctgtggagtggtataatgttgtttgactatggattttaattagttataaatgtatattggaaactctggtgcaaccactgagaaatgtaaaaaaggaagcatacttgatatgctaataataaagga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405221 171 - 41321030 aaagaattatgattattttattattataaggtactcacacactacctgtggagtggtataatgttgtttgactatggattttaattagttataaatgtatataggaaactctggtgcaaccactgagaaatgtgaaaaaggaagcatacttgatatgctaataataaagga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64478929 171 - 101219884 gaagaattatgattattttattattataagatactcacacactacctgtgaagtggtataatgttgtttgaatatggattttcattagttataaatgtatattggaaactctggtgcaactactgagaaatgtgaaaaaggaagcatacttgatatgctaataaTaaagga i chlSab2.chr22 C 0 I 788 s manLeu1.NW_012098965v1 861525 171 - 924385 gaagaattatgattattttattattataaggtactcacacactacctgtgaagtggtataatgttgttttactatggattttaattagttataaatgtatattggaaactctggtgcaaccactgagaaatgtgaaaaaggaagcatacttgatatgctaataataaagga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6704991 171 - 10587913 gaagaattatgattattttattattataaggtactcacacactacctgtgaagtggtataatgttgtttgaatatggattttaattagttataaatgtacattggaaactctagtgcaaccactgagaaatgtgaaaaaggaagcatacttgatatgctaataatgaagga i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46027065 168 - 98464013 gaagaattaggattattttattattataacatactcata--ctacctgtgaagtcgtatagtgttgtttgaacatgga-tttaattagttataaatttatattggaaactcaggtgcaaccactgagaaatacaaaagaagaagcataattgatatgctaatactatagga i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27709592 168 + 27742158 gaagaattaggattattttattattataacgtactcata--ctacctgtgaagtggtatagtgttgtttgaacatgga-tttaattagttataaatttatattggaaactctggtgcaaccactgagaaatgtaaaagaagaagcataattgatatgctaatactaaagga i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 246985 168 - 4835464 aaagaattaggattattttattattataaggtactcata--ctacctgtgaagtggtatagtgttgtttgaacaagga-tttaattagttataaatttatattggaaactctggtgcaaccactgagaaatgtaaaagaagaagcataactgatatgccaatattaaagga i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3705641 168 + 4093027 gaagaattaggattattttattattataaggtactcata--ctacctgtgaagtggtatagtgttgtttgaacatgga-tttaattagtaataaatttatattggaaactcaggtgcaaccactgagaaatgtaaaagaagaagcataattgatatgctaatactaaagga i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e papAnu3.chr2 59540709 633 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638323 626 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=3160875.000000 s hg38.chrUn_KI270749v1 94379 453 + 158759 gagaaaatggaatcatactaaatgctcaattaaagccatgaaaggcagtaaaatagtggaagacaaactaagaacaaagaaaaagggaaacaaatataaaactaacaaatatgataggtattaattcaactaaatcattagttactttaaccatcaatgttctaaatatatcagt---taaaaggcaaagattgtagaaatggatt----taaaaaaaccttcccaattgtatgttgcc-tacaagaaacatgcattaactataagagcacatactgaaagatatactatgctgatgctaatttttaaaatgggaacagctatattaattttaaacagactagacttcagagcaaagaaagttatcagggctaaagatgggtattacataatgataaaggggtcagttccttataaagacatgacaatcctta----------atgtatagatgcctaacaatggagcatc s panTro5.chr3 201981620 453 - 202621043 gagaaaatggaatcatacaaaatgctcaattaaagccaggaaaggcagtaaaatagtggaagacaaactaagaacaaagaaaaagggaaacaaatataaaactaacaaatatgataggtattaattcaactaaatcattagttactttaaacatcaatgttctaaatatatcagt---taaaaggcaaagattgtaaaaatggatt----taaaaaaaccttcccaattgtatgttgcc-tacaagaaacatgcattaactataagagcacatactgaaagatatactatgctgatgctaatttttaaaatgggaacagctatattaattttaaacagactagacttcagagcaaagaaagttatcagggctaaagatgggtattacataatgataaaggggtcagttccttataaagacatgacaatcctta----------atgtatagatgcttaacaatggagcatc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204749620 453 - 205426864 gagaaaatggaatcatacaaaatgctcaattaaagccaggaaaggcagtaaaatagtggaagacaaactaagaacaaagaaaaagggaaacaaatataaaactaacaaatatgataggtattaattcaactaaatcattagttactttaaacatcaatgttctaaatatatcagt---taaaaggcaaagattgtaaaaatggatt----taaaaaaaccttcccaattgtatgttgcc-tacaagaaacatgcattaactataagagcacatactgaaagatctactatgctgatgctaatttttaaaatgggaacagctatattaattttaaacagactagacttcagagcaaagaaagttatcagggctaaagatgggtattacataatgataaaggggtcagttccttataaagacatgacaatcctta----------atgtatagatgcttaacaatggagcatc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67566154 452 + 86207423 gagaaaatggaatcaaacaaaa-gctcaagtaaagccacaaaaggcagtaaaatagtggaagacaaactaagaacaaagaaaaagggaaacaaatataaaactaacaaatatgataggtattaattcaactatatcattagttactttaaacatcaatgttctaaatatatcagt---taaaaggcaaagattgtaaaaatggatt----taaaaaaacattcccaattgtacgttgcc-tacaagaaacatgcattaactgtaagagcacatactgaaagatacactatgctgatgctaatttttaaaatgggaatagctatatttattttaaacagactagacttcagagcaaagaaagttgtcagggctaaagatgggtattacataatgacaaaggggtcaattccttataaagacataacaatcctta----------atgtatagatgtctgacaatggagcatc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049439 456 + 204787373 gcaaagatggaatcatacaaaatgctcaattaaagccacaaaaggcagtaaaatagtggaagacaaactaaaaacaaagaaaaagtgaaacaaatatgaaactaacaaatgtggtaggcattaattcaactaaatcattagttacttcaaacatcaatagtctaaatatatcagt---taaaagacaaagattgtcaaaatggatt--aaaaaaaaaaccttcccaaatgtatgttgccttacaagaaacatgcattaactaccaaagcacatacagaaagatatactatgctgatgctaatttttaaaatgggaatagctatattaattttaaacagactagacttcagagcaaagaaagttatcagggctaaagatgggcatttcataatgattaaggggtcaattccttaaaaagacatgacaatcctta----------atgtatatatgtctgataatggagcatc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60981284 456 - 192460366 gcaaagatggaatcatacaaaatgctcaattaaagccacaaaaggcagtaaaatagtggaagacaaactaaaaacaaagaaaaagtgaaacaaatatgaaactaacaaatgtggtaggcattaattcaactaaatcattagttacttcaaacatcaatagtctaaatatatcagt---taaaagacaaagattgtcaaaatggatt--aaaaaaaaaaccttcccaaatgtatgttgccttacaagaaacatgcattaactaccaaagcacatacagaaagatatactatgctgatgctaatttttaaaatgggaatagctatattaattttaaacagactagacttcagagcaaagaaagttatcagggctaaagatgggcatttcataatgattaaggggtcaattccttaaaaagacatgacaatcctta----------atgtatatatgtctgataatggagcatc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11093250 453 - 17224310 gcaaagatggaatcatacaaaatgctcaattaaagccacaaaaggcagtaaaatagtggaagacaaactaaaaacaaagaaaaagtgaaacaaatatgaaactaacaaatgtggtaggcattaattcaactaaatcattagttacttcaaacatcaatagtctaaatatatcagt---taaaagacaaagattgtcaaaatggatt--aaaaaaaaaaccttcccaaatgtatgttgccttacaagaaacatgcattaactaccaaagcacatacagaaagatatactatgctaatgctaatttttaaaatgggaatagctatattaattttaaacagactagacttcagagcaaagaaagtt---agggctaaagatgggcatttcataatgattaaggggtcaattccttaaaaagacatgacaatcctta----------atgtatatatgtctgataatggagcatc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405392 455 - 41321030 gcaaagatggaatcatacaaaatgctcaattaaagccac-aaaggcagtaaaatagtggaagacaaactaaaaacaaagaaaaagtgaaacaaatatgaaactaacaaatgtggtaggcattaatacaactaaatcattagttacttcaaacatcaatagtctaaatatatcagt---taaaagacaaagattgtcaaaatggatt--aaaaaaaaaaccttcccaaatgtatgttgccttacaagaaacatgcattaactaccaaagcacatacagaaagatatactatgctgatgctaatttttaaaatgggaatagctatattaattttaaacagactagacttcagagcaaagaaagttatcagggctaaagatgggcatttcataatgattaaggggtcaattccttaaaaagacatgacaatcctta----------atgtatgtatgtctgaaaatggagcatc i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 861696 455 - 924385 acaaagatggaatcatacaaaatgctcaattaaagccacaaaaggcagtaaaatagtggaagacaaactaaaaacaaagaaaaagtgaaaaaaatatgaaactaacaaatatggtaggcattaattcaactaaatcattagttacttcaaacatcagtagtctaaatatatcagt---taaaagacaaagattgtcaaaatggatt--aaaaaaaaaaacttcccccatgtatgttgccttacaagaaacatgcattaactaccaaagcacatacagaaagatatactatgctgatgctaatttttaaaatgggaatagctatattaattttaaacagactagacttcagagcaaagaaagttatcagggctaaagatgggcatttcataatgattaaggggtcaattcctt-aaaagacatgacaatcctta----------atgtatacatgtctgataatggagcatc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6705162 450 - 10587913 gcaaagatgaaattatacaaaatgctcaattaaagccacaaaaagcagtaaaatagtggaagacaagctaaaaacaaagaaaaagggaaacaaatatgaaactaacaaatatggtaggcattcattcaactaaatcattagttacttcaaacgtcaatagtctaaatatatcatt---taaaag--aaagattgtcaaaatgg-----aaaaaaaaaaacttcccaaatgtatgttgcc-tacaagaaacatgcattgactataaaagcacatacagaaagatatactatgctgatgctaatttttaaaatgggaatagctatattaattttaaacagactagatttcagagcaaagaaagttatcagggctaaagatgggcatttcataatgattaaggggtcaattccttagaaagacatgacaatcctta----------atgtatatatgtctgataatggagcatc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46027233 453 - 98464013 gagaaaatgaaacgataccaaatgctcagttaaagccatgaaaggcagtaaaatggtggaagacaaaataagaacaaagagaaaggaaaacaaatataaaactaaca-----aatagatgtt-----aactatatcattagttactttaaacatcagtgacctaaatatataaatatataaaaggcaaagattgtcaaaatgtattt-aaaaaaaaaaacctcctaaatgtatgttggc-aacaaaaaccacacattaactataaagacacatatataaagatatactatgctgatgctaatttttaaagtgggaatagctatattaatttcaaacagactagacttcagagcaaagaaagttatcagggctaaagatggacattacataatgataaaggggtcaattccttaaagagacataacaattctta------atatatatatatatgtctaacaatggagcatc i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27709760 455 + 27742158 gagaaaatgaaatcatacaaaatgctcagttaaagccgtgaaaggcagtaaaatggtggaagacaaaataagaacaaaaagaaaggaaaacaaatataaaactaaaaaatacaataggtgttaactcaactatatcattagttactttaaacatcagtggcctaaatatatcagt---taaaaggcaaagattgtcaaaatgtattt--tttaaaaaaaccttccaaatgtatgttggc-tacaaaactcacacattaactataaagacacatacaaaaagatatactatgctgatgctaatttttaaagtgggaatagctattttaatatcaaacagactagacttcagagcaaagaaagttatcagggctaaagatggatattacataatgataaaggggtcaagtccttaaaaagacataacaatcctta----------acatacatatgtttaacaatggagcatc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 247153 467 - 4835464 gagaaaatgaaatcgtacaaaatgctcaattaaagccatgaaaggcagtaaaatggtggaagacaaaataagaataaagagaaaggaaaacaaatataaaactaacaaatataatagatgttaactcaactatatgattagttactttaaacatcagtggcctaaatgtatcagt---taaaaggcaaagattgtcaaaatgtatttaaaaaaaaaaagcctcccaaatgtatgttggc-tacaaaaaccacacattaactataaagacacatacaaaaagatatactatgctgatgctaatttttaaagtggtaatagctatattaatttcaaacagactagacttcagagcaaagaaagttatcagggctaaagatggacattacataatgataaaggggtcaattccttaaaatgacataacaatcctttatatatatatatatatatatatctaacaatggagcatc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3705809 457 + 4093027 gagaaaatgaaataatacaaaatgcttaattaaagccatgaaaggcagtaaaatggtggaagacaaaacaagaacaaagagaaaggaaaacaaatataaaactaacaaatataatagatgttaactcaactatatcattagttactttaaacatcagtggcctaagaatatcagt---taaaaggcaaagattgtcaaaatgtatttaaaaaaaaaaaacctaccaaatgtatgctggc-tacagaaaccacacattaactataaagacacatatgtaaagatatactacgctgatgctaatttttaaagtgggaatagctatattaattttaaacagactagacttcagagcaaagacagttatctgggctaaagatggacattacgtaatgataaaggggtcaattccttaaaaagacataacaatcctta----------atatatatatgtctaataatggagcatc i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e papAnu3.chr2 59540709 633 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638323 626 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=9555.000000 s hg38.chrUn_KI270749v1 94832 1 + 158759 a s panTro5.chr3 201982073 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204750073 1 - 205426864 a i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69638949 1 + 202140232 a i ponAbe2.chr3 I 626 I 1844 s nomLeu3.chr21 67566606 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049895 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60981740 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11093703 1 - 17224310 a i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405847 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 862151 1 - 924385 a i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6705612 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46027686 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27710215 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 247620 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3706266 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e papAnu3.chr2 59540709 633 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=33124.000000 s hg38.chrUn_KI270749v1 94833 4 + 158759 aaaa s panTro5.chr3 201982074 4 - 202621043 aaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204750074 4 - 205426864 aaaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67566607 4 + 86207423 aaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049896 4 + 204787373 aaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60981741 4 - 192460366 aaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11093704 4 - 17224310 aaaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405848 4 - 41321030 aaaa i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 862152 4 - 924385 aaaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6705613 4 - 10587913 aaaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46027687 4 - 98464013 aaaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27710216 4 + 27742158 aaaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 247621 4 - 4835464 aaaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3706267 4 + 4093027 aaaa i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e papAnu3.chr2 59540709 633 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=7847.000000 s hg38.chrUn_KI270749v1 94837 1 + 158759 a s panTro5.chr3 201982078 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204750078 1 - 205426864 a i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67566611 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049900 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60981745 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11093708 1 - 17224310 a i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405852 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59541342 1 + 187378091 a i papAnu3.chr2 I 633 I 1849 s manLeu1.NW_012098965v1 862156 1 - 924385 a i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6705617 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46027691 1 - 98464013 g i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27710220 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 247625 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3706271 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=2849744.000000 s hg38.chrUn_KI270749v1 94838 400 + 158759 catgaggcaacatctaagagaactgcaaggagaaaaacatgagtccac------tatcatagttggtgacttcaacacccctctatcaaaaatggacatatcaagcaga-cagaaaaaagagtaaacacagcaccatcaattaactggatataattgacatctactgactgtcttatgattaaagaacacactattaaagaacacgtggatgaaagaagaaatcttaacaacaacaaaataagtattttgaactaaatgaaaatgaaaatacaacttacaaagtttgtgggatgtgtcgaaagcagtgcttagagagaaatttatagcgttgaatacatgtattagaaaagaaatatttaaaattaatcacctTatctataacaaactcacagccaacattatactt s panTro5.chr3 201982079 400 - 202621043 catgaggcaacatctaatagaactgcaaggagaaaaacatgagtccac------tatcatagttgatgacttcaacacccctctatcaaaaatggacatatcaagcaga-cagaaaaaagagtaaatacagcaccgtcaattaactggatataattgacatctactgactgtcttatgattaaagaacacactattaaagaacacgtggattaaagaagaaatctcaacaacaacaaaataagtattttgaactaaatgaaaatgaaaatacaacttacaaagtttgtgggatgtgctgaaagcagtgcttagagagaaatttatagcattgaatacatttattagaaaagaaatatttaaaattaatcacctTatctataacaaactcacagccaacattatactt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204750079 400 - 205426864 catgaggcaacatctaatagaactgcaaggagaaaaacatgagtccac------tatcatagttggtgacttcaacacccctctatcaaaaatggacatatcaagcaga-cagaaaaaagagtaaatacagcaccgtcaattaactggatataattgacatctactgactGTCTTAagattaaagaacacactattaaagaacacgtggattaaagaagaaatctcaacaacaacaaaataagtattttgaactaaatgaaaatgaaaatacaacttacaaagtttgtgggatgtgctgaaagcagtgcttagagagaaatttatagcattgaatacatttattagaaaagaaatatttaaaattaatcacctTatctataacaaactcacaacgaacattatactt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67566612 395 + 86207423 catgaggcaacatctaatagaactgcaaggagaaaaacatgagtccac------tatcatagttgatgacttcaacacccctctatcaaaaatggacatatcaagcagaccagaaaaaagagtaaacacagcatcatcaattaactggatataattgacatctactgactgttttatgattaaacaacacaatattaaagaggacacggattaaagaagaaatctcaacaacaacaaaataagtatttttaac------aaaatgaaaatacaacttacaaagtttgtgggatgtgttgaaagcagtgcttagagagaaatttatagcattgaatacatttattagaaaagaaatatttaaaattaatcacctTatctaaaacgaactcatagccaacattatactt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66049901 399 + 204787373 cgtgaggcaacatctaatagaactgcaagaagtaaaacatgagtccac------tctcatagtcgttgacttcaacatccctctatcaaaaatggacatatcaagcagg-cagaaaaaagaataaacacaacaccatcaattaactggatataattgacatatattgactgttttatgattaaacaacacactattaaagtagacgtgaattaaagaagaaatcccaaaaacaacaaaataagtattttgaactaaatgaaaatt-aaatacaacttacaaagtttgtgggatgtgttgaaaacagtgcttagagagaaattcatagcattgaatacatttattagaaaagaaaaatttaaaattgattacctTatctataacaaactcacagccaacattatactt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60981746 399 - 192460366 cgtgaggcaacatctaatagaactgcaagaagtaaaacatgagtccac------tctcatagttgttgacttcaacatccctctatcaaaaatggacatatcaagcagg-cagaaaaaagaataaacacaacaccatcaattaactggatataattgacatatattgactgttttatgatgaaacaacacactattaaagtagacgtgaattaaagaagaaatcccaaaaacaacaaaataagtattttgaactaaatgaaaatt-aaatacaacttacaaagtttgtgggatgtgttgaaaacagtgcttagagagaaattcatagcattgaatacatttattagaaaagaaaaatttaaaattgattacctTatctataacaaactcacagccaacattatacct i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11093709 399 - 17224310 cgtgaggcaacatctaatagaactgcaagaagtaaaacatgagtccac------tctcatagttgttgacttcaacatccctctatcaaaaatggacatatcaagcagg-cagaaaaaagaataaacacagcaccatcaattaactggatacaattgacatatattgactgttttatgattaaacaacacactattaaagtagacgtgaattaaagaagaaatcccaaaaacaacaaaataagtattttgaactaaatgaaaatt-aaatacaacttacaaagtttgtgggatgtgtcgaaaacagtgcttagagagaaattcatagcattgaatacatttattagaaaagaaaaatttaaaattgattacctTatctgtaacaaactcacagccaacattatactt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17405853 399 - 41321030 cgtgaggcaacatctaatagaactgcaagaagtaaaacatgagtccac------tctcatagttgttgacttcaacatcccactatcaaaaatggacatatcaagcagg-cagaaaaaagaataaacacagcaccatcaattaactggatataattgacatatattgactgttttatgattaaacaacacactattaaagtagatgtgaattaaagaagaaatcccaaaaacaacaaaataagtattttgaactaaatgaaaatt-aaatacaacttacaaagtttgtgggatgtgtcgaaaacagtgcttagagagaaattcatagcattgaatacatttattagaaaagaaaaatttaaaattgattacctTatctataacaaactcacagccaacattatactt i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 862157 399 - 924385 catgaggcaacatctaatagaacttcaagaagtaaaacatgagtccac------tatcatagttgttgacttcaacatccctctatcaaaaatggacatatcaagcagg-cataaaaaagaataaacacagcaccatcaattaactggatataattgacacatattgactgttttatgattaaacaacacactattaaagtagacgtgaattaaagaagaaatcccaaaaacaacaaaataagtattttgaactaaatgaaaatt-aaatacaacttacaaagtttgtgggatgtgttgaaaacagtgcttagagagaaattcatagcattgaatacatttattagaaaagaaaaatttaaaattgattacctTatctataacaaactcacagccaacattatactt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6705618 399 - 10587913 tgtgaggcaacatctaatagaactgcaagaagtaaaacctgagtccac------tatcatagttgttgacttcaacgtccctctatcaaaaatggacatatcaagcagg-cagaaaagagaataaacacagcaccatcaattaactggatataactgacatatattgactgttttatgattaaacaacacgctattaaggtagacatgaattaaagaagaaatgccaacaacaataaaataagtattttgaactaaatgaaaatt-aaatacaacttacaaagtttgtgggatgtgtcgaaagcagtgcttagagagaaatttatagcattgaatacatttattagaaaagaaagatttaaaattgattacctTTtctatgacaaactcacagccaacattatactt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46027692 399 - 98464013 catgaggcaacatcttatataacatcaaggagaaagacatgagtccac------tatcatagttggagacttcagcacacctctgtcaacaatgtacatataaagcaag-aagaaaaaagagtaaacacagcaccatcaattacctggatataattgacatctattgactgtttcatgattaaacaacacattattaaacaagacatggattaaaaaagaaatctcaacaacaacaaaataagtattttgaactaaatgaaaatgaaaatacaacttacaaagtttgtgggatgtgtcgaaagcagtgcttagagagaaatttacagcattgaatacatttattac-agagaaaaatttaaaattaatcaCTTTatctataacaaactcacagccaacattatactt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27710221 400 + 27742158 catgaggcaacatctcataaaacatcgaggagaaagacatgagtccactacaggtatcacagttggagacttcaacacacctctatcaacaatgtacatat-cagaaag-aagaagaaagaataaacacagctccatcaattacctgtatataattgacatctattgactgtttcctgattaaacaacaCATGATtaaagaagacatggattaaagaagaaatctcaacaacaacaaaataagtattttgaactaaatgaaaatgaaaatacaacttacaaagtttgtgggatgtgttgaaggcagagcttagagagaaatttacagcattgaatacatttattag-agagaaaaatttaaaattaatcaCtt----tatggcaaactcacagccaacattatactt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 247626 394 - 4835464 catgaggcaacatctcgtataacatcaaggagaaagacatgagtccac------tatcatagttggagacttcaacacacctctatcaacaatgtacatatcaagcaag-aagaaaaaagagtaaacacagcaccatcaattacctggatataattgacatctattgactgtttcatgattaaacaacacattattaaagaagacatggattaaagaacaaatctcaataacaacaaaataagtattttgaactaaatgaaaatgaaaatacaacttacaaagtttgtgggatgtgttgaa---agagcttagagagaaatgtacagcattgaatacatttattag-agagaaaaatttaaaattaatcaCTTTatctgtgacaaact--cagccgacattatactt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3706272 399 + 4093027 catgaggcaacatctcatataacatcaaggagaaagacatgagtccac------tatcatagttggagacttcaacacacctctatcaacaatgtacatatcaagcagg-aagaaaaaagagtaaacacagcaccatcaattacctggatataattgacatctattgactgtttcatgattaaacaacacattattaaagaagacatggattaaagaagaaatctcaacaacaacaaaataagtattttgaactaaatgaaaatgaaaatacaacttacaaagtttgtgggatgtgttgaaagcagtgcttagagagaaatttacattattgaatacatttattag-agagaaaaatttaaaattaatcaCTTcatctatgacaaactcacagccaacattatactt i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e papAnu3.chr2 59541343 1849 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11040362 7224 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=4720018.000000 s hg38.chrUn_KI270749v1 95238 612 + 158759 aatggggaaaagttgaaagcattccccgtgagaactggaataagacaaagatgcccactttcaccacttgtattcagcatagtactggaagtcctagccagagcaatcagacaaaagaa--aaataaagggcatccaaatcagtaaaaaggaagtcaaagtgttcttgtttgctgatgatatgatcttatacctagaaaaccttaaagactcatccaaaatgcttctaaaactggtaaatgaattcagtaaagtttcaggatacaaaattaatgtatgcaaatcagtagcgctgatatacaccaacagcaaccaagctgagaatcaaatcaagaactcaacccctttaacaatagctgcaaaatgccacaaaaat---ataacaacaa-aaaaatttagtaatatacttaaccaagaaggtgatagacctctataag----gaaaactgcaaaacactgctgacagaaatcatagacaacacaaacaaatggaaatacataccacgctcatggatgggtagaatcaatattgtgaaaatgaccatactgccaaaagcaatccacaaatttaatgcaattcccatcaaaataccaccatcattcttcacagaattagaaaaaa s panTro5.chr3 201982479 612 - 202621043 aatggggaaaagttgaaagcattccccgtgagaactggaataagacaaagatgcccactttcaccacttgtattcaacatagtactggaagtcctagccagagcaatcagacagaagaa--aaataaagggcatccaaatcagtaaaaaggaagtcaaagtgttcttgtttgctgatgatatgatcttacacctagaaaaccttaaagactcatccaaaatgcttctaaaactggtaaatgaattcagtaaagtttcaggatacaaaattaatgtatgcaaatcagtagcgctgaaatacaccaacagcaaccaagctgagaatcaaatcaagaactcaacccctttaacaatagctgcaaaatgccacaaaaat---ataacatcaa-aaaaaattagtaatatacttaaccaagaaggtgatagacctctataag----gaaaactgcaaaacactgctgacagaaatcatagacaacacaaacaaatggaaatacataccacgctcatggatgggtagaatcaatattgtgaaaataaccatactgccgaaagcaatccacaaatttagcgcaattcccatcaaaataccaccatcattcttcacagaattagaaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204750479 612 - 205426864 aatggggaaaagttgaaagcattccccgtgagaactggaataagacaaagatgcccactttcactacttgtattcaacatagtactggaagtcctagccagagcaatcagacaaaagaa--aaataaagggcatccaaatcagtaaaaaggaagtcaaagtgttcttgtttgctgatgatatgatcttatacctagaaaaccttaaagactcatccaaaatgcttctaaaactggtaaatgaattcagtaaagtttcaggatacaaaattaatgtacgcaaatcagtagcgctgatatacaccaacagcaaccaagctgagaatcaaatcaagaactcaacccctttaacaatagctgcaaaatgccacaaaaat---ataataacaa-aaaaatttagtaatatacttaaccatgaaggtgacagacctctataag----gaaaactgcaaaacactgctgacagaaatcatagacaacacaaacaaatggaaatacataccatgctcatggatgggtagaattaatattgtgaaaatgaccatactgccaaaagcaatccacaaatttaatgcaattcccatcaaaataccaccgtcattcttcacagaattagaaaaaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67567007 608 + 86207423 aatggcgaaaagttgaaagcattccccgtgagaactggaataagacaaagatgcccactttcaccacttgtattcaacatagtactggaagtcctagccagagcagtcagacaaaagaaagaaataaagggcatccaaatcagtaaaaaggaaatcaaaatgttcctgtttgctgatgatatgatcttatacctagacaaccttaaagactcatccaaaatgcttctaaaactggtaaatgaattcagtaaagtttcaggatacaaaattaatgtaggcaaatcagtagcgctgatatacaccaacagcaaccaagctgagaatcaaatcaagaactcaacccctttaacaatagctgcaaaatgccacaaaaat---atgacaacaa-aa-----tagtaatatacttaaccaagaaggtgaaagacctctataag----gaaaactacaaaacactgctgacagaaatcatagacaacacaaa-aaatggaaacacataccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgccaaaagcaatccacaaatttaatgcaattcccatcaagataccaccattattcttcacagaattagaaaaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66050300 613 + 204787373 aatgaggaaaagttgaaagcattccctgtgagaactgggataagacaaggacgcccactttcacaacttgtatttaacatagtactggaagtcctagccagagcagtcagataaaagtaagaaataaagggaatccaaattagtaaaaaggaagtcaaagtattcctgtttgctgatgatatgatctcatacttagaaaaccttaaagactcatccaaaatgcttctaaaactggtaaatgaattcagtaaagtttcaggatacaaaattaatgtacacaaataagtagcactgatatacaccaacagcaaccaagctgagaatcaaatcaagaactcaacccctttaacaataactgcaaaaccccacaaaaat---ataacaacaa-aaaaacttactaatatacttaaccaagaaggtgaaagacctctataag----gaaaactacaaaacactgctgacagaaattattgacaacacaaacaaatggaaacatataccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgcc-aaagcaatccacaaatttaatgcaattttcatcaaaataccaccatcattcttcacagaattagaaaaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60982145 613 - 192460366 aatgaggaaaagttgaaagcattccctgtgagaactgggataagacaaggatgcccactttcacaacttgtatttaacatagtactggaagtcctagccagagcagtcagacaaaagtaagaaataaagggaatccaaattagtaaaaaggaagtcaaagtattcctgtttgctgatgatatgatctcatacttagaaaaccttaaagactcatccaaaatgcttctaaaactggtaaatgaattcagtaaagtttcaggatacaaaattaatgtacacaaataagtagcactgatatacaccaacagcaaccaagctgagaatcaaatcaagaactcaacccctttaacaataactgcaaaaccccacaaaaat---ataacaacaa-aaaaacttactaatatacttaaccaagaaggtgaaagacctctataag----gaaaactacaaaacactgctgacagaaattattgacaacacaaacaaatggaaacatataccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgcc-aaagcaatccacaaatttaatgcaattttcatcaaaataccaccatcattcttcacagaattagaaaaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11094108 613 - 17224310 aatgaggaaaagttgaaagcattccctgtgagaactggaataagacaaggacgcccactttcacaacttgtatttaacatagtactggaagtcctagccagagcagtcagacaaaagtaagaaataaagggaatccaaattagtaaaaaggaagtcaaagtattcctgtttgctgatgatatgatctcatacttagaaaaccttaaagactcatccaaaatgcttctaaaactggtaaatgaattcagtaaagtttcaggatacaaaattaatgtacacaaataagtagcactgatatacaccaacagcaaccaagctgagaatcaaatcaagaactcaacccctttaacaataactgcaaaaccccacaaaaat---ataacaacaa-aaaaacttactaatatacttaaccaagaaggtgaaagacctctataag----gaaaactacaaaacactgctgacagaaattattgacaacacaaacaaatggaaacatataccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgcc-aaagcaatccacaaatttaatgcaattttcatcaaaataccaccatcattcttcacagaattagaaaaaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17406252 613 - 41321030 aatgaggaaaagttgaaagcattccccgagagaactggaataagacaaggacgcctactttcaccacttgtatttaacatagtactggaagtcctagccagagcagtcagacaaaagaaagaaataaagggaatccaaatcagtaaaaaggaagtcaaagtattcctgtttgctgatgatatgatctcatacttagaaaaccttaaagactcatccaaaatgcttctaaaactggtaaatgaattcagtaaagtttcaggatacaaaattaatgtacacaaataagtagcactgatatacaccaacagcaaccaagctgagaatcaaatcaagaactcaacccctttaacaataactgcaaaaccccacaaaaat---ataacaacaa-aaaaacttactaatatacttaaccaagaaggtgaaagacctctataag----gaaaactacaaaacactgctgagagaaattatcgacaacacaaacaaatggaaacatataccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgcc-aaagcaatccacaaatttaatgcaattttcatcaaaataccaccatcattcttcacagaattaggaaaaa i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 862556 613 - 924385 aatgaggaaaagttgaaagcattccccatgagaactggaataagacaaggacgcccactttcaccacttgtatttaacatagtactggaagtcctagccagagcagtcagacaaaagaaagaaataaagggaatccaaatcagtaaaaaggaagtcaaagtattcctgtttgctgatgatatgatctcatacttagaaaaccttaaagactcatccaaaatgcttctaaaactggtaaatgaattcagtaaagtttcaggatacaaaattaatgtacacaaataagtagcactgagatacaccaacagcaaccaagctgagaatcaaatcaagaactcaacccctttaacaatagctgcaaaaccccacaaaaat---ataacaacaa-aaaaacttactaatatacttaaccaagaaggtgaaagacctctataag----gaaaactacaaaacactgctgacagaaattatcgacaacacaaacaaatggaaacatataccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgcc-aaagcaatccacaaatttaatgcaattttcatcaaaataccaccatcattcttcacagaattagaaaaaa i manLeu1.NW_012098965v1 C 0 I 286 s colAng1.NW_012114711v1 6706017 613 - 10587913 aatgaggaaacgttgaaagcattccccatgagaactggaataagacaaggacgcccactttcaccgcttgtatttaacatagtactggaaatcctagccagagcagtcagacaaaagaaagaaataaagggaatccaaatcagtaaaaaggaagtcaaagtattcctgtttgctgatgatatgatctcatacttagaaaaccttaaagactcatccaaaatgcttctaaaactggtaaatgaattcagtaaagtttcaggatacaaaattaatgtacacaaataagtagcactgatatacaccaacagcaaccaagctgagaatcaaatcaagaactcaacctctttaacaatagctgcaaaaccccacaaaaat---ataacaacaa-aaaaacttagtaatatacttaaccaagaaggtgaaagacctctataag----gaaaactacaaaacactgctgacagaaatcatagacaacacaaacaaatggaaacatataccatgctcatggatgggtagaatcaatattgtgaaaatgaccacagtgcc-aaagcaatccacaaatttaatgcaattttcatcaaaacaccactatcattcttcacagaattagaaaaaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46028091 608 - 98464013 aatgggtaaaagttgaaagcattccctgtgagacctggaactggacaaagacgcccactttcaccacttctattcaacatagtactggaagtcctagtcaaagcaattaggcaagagaaagaaataaagggcatctaaatcagtaaaaaggaagtcaaagtgttgctgtttgctggtgatttga----aaacctaaaaaaccctaaagaattatccaaaaagcttctaaaactggtgaatgaattcagtaaagtttcagaatacaaaattcatgtatgcaaattagtagtgctgctatatgccaacagcaaacaagctgagaatc-aatcaagaactcaaccccttttataatagctgcaaaaaac--aaaaaat---acaacaacagcaaaagctaagtaaaatacttaaccaaggaggtgaaagacctctatagg----gaaaactacgacatgctactgacagaaatcataaacaacacaaacaaatggaaacacatgccattctcatggatggatagagtcattattgtgaaaacaaccatactgccaaaagcaatccacaaatttaatgtaattcagatcaaaataccactatcattcttcacagaactagaaaaaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27710621 611 + 27742158 aatgggtaaaagttgaaagcattccctgtgagacctggaataggacaaggatgcccactttcaccacttctattcaacatggtactggaagtcctagccaaagcaatcagagaagagaaagaaagaaagggcatctaaatcaataaaaaggaagtcaaagtgttgctgtttgctggtgatttga----aaacctagaaaactctaaagacttatccaaaaatcttctaaaactggtgaatgaattcagtaaggtttcaggacacaaaattcatgtaggcaaattagtagtgctgctatacaccaacagcaaacaagctgagaatc-aatcaagaactcaaccccttttataatagctgcaaaaaac--aaacaatacaacaacaacagcaaaaactaagtaatatacttaaccaaggaggtgaaagacctctatagg----gaaaattacaaaatgctactgacagaaatcataaacaacacaaacaaatgaaaacacataccatgctcgtggatggatagagtcaatattgtgaaaatgaccatactgccaacagcaatccacaaatttaatgtaattcagatcaaaataccactaccattcttcacagaaataggaaaaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 248020 608 - 4835464 aatgggtaaaagttgaaagcattccctgtgagacctggaacaggacaaggatgcccactttcatcacttctattcaacttagtactggaagtcctagccaaagcaatcagacaagagaaagaaagaaagggcatctaaatcagcaacaaggaagtcaaagtgttgctttttgctggtgatttga----aaacctagaaaaccctaaagacttatccaaaaagcttctaaaactggtaaatgaattcagtaaagtttcaggatacaaaattcatgtacgcaaattagtagtgctgctatacaccaacagcaaacaagctgagaacc-aatcaagaactcaaccccttttataacagctgcaaaaaac--aataaat---acaacaacagcaaaaactaagtaatatacttaaccaaggaggtgaaagacctctatagg----gaaaactacaaaatgctactgacagaaatcataaacaacacaaacaaatggaaacacatgccatgctcatggatggacagagtcaatattgtgaaaataaccacactgccaaaagaaatccacaaatttaatgtgattcagatcaaaataccactatcattcttcacagaactagaaaaaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3706671 604 + 4093027 aatgggtaaaagttgaaagcattccctgtgagacctggaacacaacaaggatgcccactttcaccacttctattcaacatagtactggaagtcctagccaaagcaatcaggcaaaagaaagaaataaagggcatctaaatcagtaaaaaggaaatcaaagtgttgctgtttgctggcgatttga----aaacctagaaaaccctaaagatttatctgaaaagcttctaaaactggtgaatgaattcagtaaagtttcaggatacaaaattcatgtacgcaaattagtagtgcttctatacgccaaaagcaaacaagttgagaatc-aatcaagaactcaaccccttttataatagttgcaaaaaac--aaaaaat---acaacaacagcaaaaactaagtaatatacttaaccaaggacctgaaagacctctatagg----gaaaactacaaaatgctactgacagaaatcataaacaacacaaacaaatggaaacacataccatgctcatggatg----gagtcaatattgtgaaaatgaccatactgccaaaagcaatccacaaatttaatgtaatttggatcaaaataccactatcattcttcacagaactagaaaaaa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11047586 586 + 30473821 aagaagaagaagaaaaaaacattcccactgata-----------aaaaggatagccattgtcaccacttctacaaaacataatgctggaaatcccagccagagcaaatcggcaagagaaagaaattaagaatatccaaatgaggaaagaagagatcaaactatcactttttgcagatgccatgatcttattcctagaaaacctcaatgattccaccaagagaatcctaaaaa-gatgaataaattcagcaaagtcttaggttacaaaagcagtgtccacaagtcagtagcattcctatacaacaatgagagttaatttgagatccaaatcaaagtctcaataccatttacaattgcta-------cctagaaaat---a----------aaatacttagggatatacttaaccaag--ggtgaaagatttccacaaatctttcaaattccaaaacactgaggagagaaatcacagatgatataaacaagtgaaaa-acataacctgctcatggatcggtaggatcgacatcgctaaaatgtccatactatc-caagtgatttacagagtcagttcaatccccatccaaataccaaggctatagttcatagatctagaataaa i otoGar3.GL873534 I 7224 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e papAnu3.chr2 59541343 1849 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=531666.000000 s hg38.chrUn_KI270749v1 95850 98 + 158759 caatcctaaaattcatatggaacc-------------aaaaaaagcccacagggccaaagcaagactaagg-aaaaagaacaaatctggagacattacattacct--------a--------------------atttca s panTro5.chr3 201983091 97 - 202621043 caatcctaaaattcatatggaacc-------------aaaaaaagcccacagggccaaagcaagactaagg-aaaaagaacaaatctggagac-ttacattacct--------a--------------------atttca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204751091 118 - 205426864 caatcctaaaattcatatggaacc-------------aaaaaaagcccacagggccaaagcaagactaagg-aaaaagaacaaatctggagacattacattacct--------aactatactatcaaactatacatttca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67567615 99 + 86207423 caatcgtaaaattcatacggaacca------------aaaaaaagcccacagggccaaagcaagactaagg-aaaaagaacaaatctggagacattacattacct--------a--------------------atttca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66050913 99 + 204787373 caatcctaaaattcatatggaaccaaaaaaa------aaaaaaagcccacatggccaaagc------aaag-aaaaagaaaaaatctggaggcattacattacct--------a--------------------agttca i rheMac8.chr2 C 0 I 20 s macFas5.chr2 60982758 108 - 192460366 caatcctaaaattcatatggaaccaaaaaaa-----aaaaaaaagcccacatggccaaagc------aaag-aaaaagaaaaaatctggaggcattacattacctaagttcaga--------------------agttca i macFas5.chr2 C 0 I 8 s macNem1.NW_012018021v1 11094721 88 - 17224310 caatcctaaaattcatatgg-----------------aaaaaaagcccacatggccaaagc------aaag-aaaaagaaaaaatctggaggcattacattacct--------a--------------------agttca i macNem1.NW_012018021v1 C 0 I 8 s cerAty1.NW_012009469v1 17406865 105 - 41321030 caatcctaaaattcatatggaaccaaaaaaaaaaaaaaaaaagggcccacatggccaaagc------aaag-aaaaagaaaaaatctggaggcattacattacct--------a--------------------agttca i cerAty1.NW_012009469v1 C 0 I 1 s colAng1.NW_012114711v1 6706630 100 - 10587913 caatcctaaaattcatatggaaccaaaaaaa-----aaaaaaaaaatcacatggccaaaac------aagg-aaaaagaaaaaatctagaggcattacattacct--------a--------------------agttca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46028699 98 - 98464013 caattctaaaactcatacggaacca------------aaaaggagcccacatgaccaaagcaagtctaag--gaaaagaacaaatctggaggcattacattaccc--------a--------------------acttca i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27711232 100 + 27742158 caatcctaaaactcatgtgtaacca------------aaaagcagctcacatagccaaagcaagcctaaggagaaaagaacaaatctggaggcattacattacct--------a--------------------acttca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 248628 99 - 4835464 caattctaaaactcatatggaacca------------aaaaggagcacacatggccaaagcaaacctaagg-aaaaagaacaaatctggatgcattacattacct--------a--------------------acttca i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3707275 99 + 4093027 caattctaaaactcatatggaacca------------aaaagaagcccacatggccaaagcaagcctaagg-aaaaagaacaaatctggaggcattacattacct--------a--------------------acttca i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11048172 99 + 30473821 taactctatgcttcttgtggaaaca------------aggtagagcctgaacagctaaagcaatgttaagg-tgaaggaaaaaattgggaggcatcatattaaaa--------a--------------------atttta i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e papAnu3.chr2 59541343 1849 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e manLeu1.NW_012098965v1 863169 286 - 924385 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=8735.000000 s hg38.chrUn_KI270749v1 95948 4 + 158759 aact s panTro5.chr3 201983188 4 - 202621043 aact i panTro5.chr3 C 0 C 0 s panPan2.chr3 204751209 4 - 205426864 aact i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67567714 4 + 86207423 aact i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60982874 4 - 192460366 gatg i macFas5.chr2 I 8 C 0 s macNem1.NW_012018021v1 11094817 4 - 17224310 gatg i macNem1.NW_012018021v1 I 8 C 0 s cerAty1.NW_012009469v1 17406971 3 - 41321030 -aag i cerAty1.NW_012009469v1 I 1 I 8 s colAng1.NW_012114711v1 6706730 4 - 10587913 gatg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46028797 4 - 98464013 aact i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27711332 4 + 27742158 aact i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 248727 4 - 4835464 aatt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3707374 4 + 4093027 aact i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11048271 4 + 30473821 agct i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e papAnu3.chr2 59541343 1849 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e manLeu1.NW_012098965v1 863169 286 - 924385 I e rheMac8.chr2 66051012 20 + 204787373 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=123248.000000 s hg38.chrUn_KI270749v1 95952 27 + 158759 atactatcaggccatagtc-------------------------------------accaaaat s panTro5.chr3 201983192 27 - 202621043 atactatcaggccatagtc-------------------------------------accaaaac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204751213 26 - 205426864 acactatcaggccatagtc-------------------------------------acc-aaac i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67567718 27 + 86207423 atactatcaggccatagtc-------------------------------------accaaaac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66051032 27 + 204787373 atactatcaggccatagtc-------------------------------------aaaaaaaa i rheMac8.chr2 I 20 I 4 s macFas5.chr2 60982878 27 - 192460366 atactatcaggccatagtc-------------------------------------aaaaaaaa i macFas5.chr2 C 0 I 4 s macNem1.NW_012018021v1 11094821 64 - 17224310 atactatcaggccatagttaaaaaaaaaaaaaaaaaaaagaaaagaaagaaagaaaaaaaaaaa i macNem1.NW_012018021v1 C 0 I 4 s cerAty1.NW_012009469v1 17406982 40 - 41321030 atagtatcaggccatagtcaaaaaaaaaaaaa------------------------aaaaaaaa i cerAty1.NW_012009469v1 I 8 I 4 s colAng1.NW_012114711v1 6706734 46 - 10587913 atactatcaggccatagtcaaaaaaaacaaaaacaaaa------------------acaaaaac i colAng1.NW_012114711v1 C 0 I 5 s calJac3.chr15 46028801 27 - 98464013 atactataaggccatagtc-------------------------------------accaaaat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27711336 27 + 27742158 atactataaggccatagtc-------------------------------------atcaaaat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 248731 27 - 4835464 ataccataaggccatagtc-------------------------------------accaaaat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3707378 27 + 4093027 ttactataaggccgtagtc-------------------------------------accaaaat i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11048275 27 + 30473821 gtactgcaaggctatagaa-------------------------------------aataaaac i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e papAnu3.chr2 59541343 1849 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e manLeu1.NW_012098965v1 863169 286 - 924385 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=3240802.000000 s hg38.chrUn_KI270749v1 95979 438 + 158759 ggcatggtactggtataaaaacaggcatatagaccaatggaacagaac------------agagaacccagaaataaacccaaatac-ttacagtcaactgatctttgacaaagcaaacaaaaacataaaatagggaaaggaacc--------ctattcaacaaatggttgccgggataattggcaagccacatgcagaagaatgaaac-tgaatcctcacctctcaccttataaaaaaatcaaattaagatggatcaaagatttaaatctaagacttgaaaccat-aaaaattctagaagataacattggaaaaacccttctagacattgacttaagaaaacacttcatgaccaagaacccaaaagcaaacacaacaaaaacaaagatgaatagatgggaattgattaaactaaaaagcttctgc-acagcagaagaaatgatcagcagagtaaacaggca---- s panTro5.chr3 201983219 438 - 202621043 ggcatggtactggtataaaaacaggcatatagaccaatggaacagaat------------agagaacccagaaataaacccaaatac-ttacagtcaactgatctttgacaaagcaaacaaaaacataaaatagggaaaggaacc--------ctattcaacaaatggttgccgggataattggcaagccacatgtagaagaatgaaac-tgaatcctcacctctcaccttataaaaaaatcaaattaagatggatcaaagatttaaatctaagacttgaaaccat-aaaaattctagaagataacattggaaaaacccttctagacattgacttaagaaaacacttcatgaccaagaacccaaaaccaaacacaacaaaaacaaagatgaatagatgggaattgattaaactaaaaagtttctgc-acagcagaagaaatgatcagcagagtaaacaggca---- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204751239 438 - 205426864 ggcatggtactggtataaaaacaggcctatagaccaatggaacagaac------------agagaacccagaaataaacccaaatac-ttacagtcaactgatctttgacaaatcaaacaaaaacataaaatagggaaaggaacc--------ctattcaacaaatggttgctgggataattggcaagccacatgtagaagaatgaaac-tgaatcctcacctctcaccttataaaaaaatcaagttaagatggatcaaagatttaaatccaagacttgaaaccat-aaaaattctagaagataacattggaaaaacccttctagacattgacttaagaaaacacttcatgaccaagaacccaaaagcaaacacaacaaaaacaacgatgaatagatgggaattgattaaactaaaaagcttctgc-acagcagaagaaatgatcagcagagtaaacaggca---- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67567745 438 + 86207423 ggcatggtagtggtataaaaacaggcatatagaccaatggaacagaat------------agagaacacagaaataaacccaaatac-ttacagtcaactgatctttgacaaagcaaacaaaaacataaaatggggaaaggaacc--------ctattcaacaaatggttgccgggataattggcaagccacatgtagaagaatgaaac-tgaatcctcacctctcaccttataaaaaaatcaaattaagatggatcaaagatttaaatctaagacttgaaaccat-aaaaattctagaagataacattggaaaaacctttctagacattagcttaaggaaagacttcatgaccaagaacccaaaagcaaacacaacaaaaacaaagatgaatagatgggaattgattaaactaaaaagcttctgc-acagcagaagaaatgatcagcagagtaaacaggca---- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66051063 433 + 204787373 ggcatggtactggtataaaaacaggcatatagaccaatggaacagaat------------agagaacccagaaatgaaaccaaatac-ttacagtcaactgatctttgacaaagcaaacagaaacataaaatggggaagggaaca--------ctattcaacaaatggtt-ctggggtagttgacaagccacatgtagaagaatgaaac-tgaatcctcacctctcaccttatccaaaaataaaattaagatggatcaaagacttaaatctaagacttgaaaccat-aaaaattctagaagataacattggaaaaactcttatagatattggcttaagcaaagacttcatgaacaagaatccaaaaggaaacacaacaaaaacaaagatgaatagatgggacttgattaaactaaaaagcttctgc-acagccaaataaatgattagcagagtaaaca-------- i rheMac8.chr2 I 4 C 0 s macFas5.chr2 60982909 433 - 192460366 ggcatggtactggtataaaaacaggcatatagaccaatggaacagaat------------agagaacccagaaatgaaaccaaatac-ttacagtcaactgatctttgacaaagcaaacagaaacataaaatggggaagggaaca--------ctattcaacaaatggtt-ctggggtagttgacaagccacatgtagaagaatgaaac-tgaatcctcacctctcaccttatccaaaaataaaattaagatggatcaaagacttaaatctaagacttgaaaccat-aaaaattctagaagataacattggaaaaactcttatagatattggcttaagcaaagacttcatgaacaagaatccaaaaggaaacacaacaaaaacaaagatgaatagatgggacttgattaaactaaaaagcttctgc-acagccaaataaatgattagcagagtaaaca-------- i macFas5.chr2 I 4 C 0 s macNem1.NW_012018021v1 11094889 412 - 17224310 ggcatggtactggtataaaaacaggcatatagaccaatggaacagaat------------agagaacccagaaatgaaaccacatac-tt---------------------aagcaaacagaaacataaaatggggaagggaaca--------ctattcaacaaatggtt-ctggggtagttgacaagccacatgtagaagaatgaaac-tgaatcctcacctctcaccttatccaaaaataaaattaagatggatcaaagacttaaatctaagacttgaaactat-aaaaattctagaagataacattggaaaaactcttatagatattggcttaagcaaagacttcatgaccaagaatccaaaaggaaacacaacaaaaacaaagatgaatagatgggacttgattaaactgaaaagcttctgc-acagccaaataaatgattagcagagtaaaca-------- i macNem1.NW_012018021v1 I 4 C 0 s cerAty1.NW_012009469v1 17407026 433 - 41321030 ggcatggtactggtataaaaacaggcatatagaccaatggaacagaat------------agagaacccagaaatgaaaccaaatac-ttacagtcaactgatctttgacaaagcaaacagaaacataaaatggggaagggaaca--------ctattcaacaaatggtt-ctggggtagttgacaagccacatgtagaagaatgaaac-tgaatcctcacctctcaccttatccaaaaataaaattaagatggatcaaagacttaaatctaagactggaaaccat-aaaaattctagaagataacattggaaaaactcttatagatattggcttaagcaaagacttcatgaccaagaatccaaaagtaaacacaacaaaaacaaagatgaatagatgggacttgattaaactaaaaagcttctgc-acagccaaagaaatgattagcagagtaaaca-------- i cerAty1.NW_012009469v1 I 4 C 0 s manLeu1.NW_012098965v1 863455 430 - 924385 ggcatggtactggtataaaaacaggcatatagaccaatggaacagaat------------agagaacccagaaatgaaaccaaatac-ttacagtcaactgatctt---caaagcaaacagaaacataaaatggggaagggaaca--------ctgttcaacaaatggtt-ctagggtagttgacaagccacatgtagaagaatgaaac-tgaatcctcacctctcaccttatccaaaaataaaattaagatggatcaaagacttaaatctaagacttgaaaccat-aaaaattctagaagataacattggaaaaactcttatagatattggcttaagcaaagacttcatgaccaagaacccaaaagtaaacacaacaaaaacaaagatgaatagatgggacttgattaaactaaatagcttctgc-acagccaaagaaatgattagcagagtaaaca-------- i manLeu1.NW_012098965v1 I 286 C 0 s colAng1.NW_012114711v1 6706785 433 - 10587913 ggcatggtactggtataaaaacaggcatatagaccaatggaacagaat------------agagaacgcagaaataaaaccaaatac-ttacagtcaactgatctttgacaaagcaaacagaaacgtaaaatggggaagggaaca--------ctattcaacaaatggtt-ctgggatagttgacaagccacatgtagaagactggaac-tgaatcctcacctctcaccttatacaaaaataaaattaagatggatcaaagacttaaatctaagacctgaaaccat-aaaaattctagaagataacattggaaaaacccttctagacattggcttaagcaaagacttcatgaccaagaacccaaaggtaaacacaacaaaaacaaagatgaatagataggacttgattaaactaaaaagcttctgc-acagccaaagaaatgattagcagagtaaaca-------- i colAng1.NW_012114711v1 I 5 C 0 s calJac3.chr15 46028828 429 - 98464013 ggcatggtactggtataaaaacaggcatatagacaaatggaactgaat------------agagaacccagaaataaagccaaatac-ttataatcaactgatccttgacaaagcaaacaaaaatgtaaaatggtaaaagaaaac--------ttattcaacaaatggtg-ctgggataattggcaagtcacatgtagaagaa--aaac-tgaat-ctcatctctcactttatacaaaaatcaaatcaagattaattaaagacttaaatctaatacctgaaactat-aaacattctagaacaaaacattgggaaaatccttctagacattgacttgggcaaagactttatgaccaagaacccaaa-gcaaacacaacaaaaaccaagataaatagatgggacttaattaaactgaaaagcttctgc-acagcagaagaaatgatcagtagagtaaata-------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27711363 430 + 27742158 ggcatggtactggtataaaaacaggcatatagaccaatggatcagcat------------agagaacccagaaataaagccaaatac-ttaaaatcaatagatccttgacaaagcaaacaaaaatgtaaaatggtgaaagaaaac--------atattcaacaaatggtg-ctgggataattgacaagtcacatgtagaagaa--aaac-tgaatcctcatctctcactttatacaaaaatcaaatcaagatgaatcaaagacttaaatctaatacctgaaaccat-aaacattctagaagaaaacattgggaaaatccttctagacattgacttgggcaaagactttatgaccaataacccaaa-gcaaacacaacaaaaaccaagataaatagatgggacttaattaaactaaaaagcttctgc-acagcagaagaaatgatcagcagagtaaaaa-------- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 248758 416 - 4835464 ggcatggtactagtgtaaaaacaggcatacagaccaatggaacagaat------------agagaacccagaaataaagccaaatac-ttacaatcaactgatccttgacaaagcaaacaaaaatgtaaaatggtgaaagaaaac--------ttattcaata---------------aattggcaagtcatgtgtagaagaa--aaac-tgaatcctcatctctcactttatacaaaaatcaaatcaagatgaatcaaagacttaaatctaatacacgaaaccat-aaacattctagaagaaaacattgggaaaatccttctagacactgatgtgggcaaagactttatgaccaagagcccaaa-gcaaacacaacaaaaaccaagataaatagatgggacttaattaaactaaaaagcttctgc-acagcagaagaaatgatcagcagagtaaaca-------- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3707405 430 + 4093027 ggcatggtactcgtataaaaacaggcctatagaccaatggaacagaat------------agagaacccagaaataaagccaaatac-ttacaatcaactgatctttgacaaagcaaacaaaaatgcaaaatggtgaaagaaaac--------ttattcaacaaatggtg-ctgggataattggcaagtcacatgtagaagaa--aaac-tgaatcctcatctctcactttatacaaaaatcaaatcaagatgaatcaaagacttaaatctaatacctgaaaccat-aaacattctagaagaaaacattgggaaaatccttctagacattgacttgggcaaagactttatggccaagaacccaaa-gcaaacacaacaaaaaccaagataaataggtgggacttaattaaactaaaaagcttctgc-acagcagaagaaatgatcagcagagtaaaca-------- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11048302 457 + 30473821 accatattattggcacaaaaa---atacagagatcaatagaacaaaacaacaacaacaaaaaaaaccccagatttaaaaccacctacattgcagccatctgatctttaacaaagcagacaataacatactctggggaatagaatccccagattctattcaataaataatg-ctggaaaaattgaatgcccatgcgcagaagaatgaaacaaaaatccttatctctcatcacttagaaaagttaattcaatatagat-gaagacttaaatgtaagacataaaactgtaaaaaaatctagatgaaaagatttgaaaaaaatttatagatatcagcctatgcaaagaatttatgaagaagaccccaatgacaatcataacaacaacaaaagcaaataaatgggacaaaacaggaacaaagaagtctggcaacaaaaagaaaaataataaacatagtagata----ataa i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1362265 2676 - 1467263 I e papAnu3.chr2 59541343 1849 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=40926.000000 s hg38.chrUn_KI270749v1 96417 6 + 158759 acccac- s panTro5.chr3 201983657 6 - 202621043 acccac- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204751677 6 - 205426864 acccac- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568183 6 + 86207423 acccac- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66051496 6 + 204787373 actcat- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983342 6 - 192460366 actcat- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095301 6 - 17224310 actcat- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17407459 6 - 41321030 actcat- i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 863885 6 - 924385 acccat- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707218 6 - 10587913 actcat- i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1364941 6 - 1467263 actcat- i rhiRox1.KN296641v1 I 2676 C 0 s calJac3.chr15 46029257 6 - 98464013 acccac- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27711793 6 + 27742158 acccac- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 249174 6 - 4835464 acccat- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3707835 6 + 4093027 acccat- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11048759 6 + 30473821 -tccaac i otoGar3.GL873534 C 0 I 97 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e papAnu3.chr2 59541343 1849 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=474860.000000 s hg38.chrUn_KI270749v1 96423 57 + 158759 agagtgggagaaaatattcacaacctgtgcaacagtcaaaggactaatattcagaat s panTro5.chr3 201983663 57 - 202621043 agagtgggagaaaatattcacaacctgtgcatcagtcaaaggactaatattcagaat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204751683 57 - 205426864 agagtgggagaaaatattcacaacctgtgcatcagtcaaaagactaatattcagaat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568189 57 + 86207423 agagtgggggaaaatactcacaacctgtacatcagtcaaaggactaatattcagaat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66051502 57 + 204787373 aggatcagagaaaatattcacaacctgtacatcagtcataggactaatattcagaat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983348 57 - 192460366 aggatcagagaaaatattcacaacctgtacatcagtcataggactaatattcagaat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095307 57 - 17224310 aggatcagagaaaatattcacaacctgtacatcagtcataggactaatattcagaat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17407465 57 - 41321030 agggtcagagaaaatattcacaacctgtacatcagtcataggactaatattcagaat i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 863891 57 - 924385 agggtcagagaaaatattcacaacctgtacatcagtcataggactaatattcagaat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707224 57 - 10587913 agggttggagaaaatattcacaacgtgtacatcagtcagaggactaatattcagaat i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1364947 57 - 1467263 agggtcggagaaaatattcacaacctgtacatcagtcaaaggactaatattcagaat i rhiRox1.KN296641v1 C 0 C 0 s calJac3.chr15 46029263 54 - 98464013 agattaggagaaaatatttataacctgtacatcagtcaaagg---aatattcagaat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27711799 57 + 27742158 agattaggagaaaatattcataacctatacatcagtcaaaggactaatattcagaat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 249180 57 - 4835464 agattcggagaaaatattcataacctgtacatcagtcaaaggactaatattcagaat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3707841 57 + 4093027 agattaggagaaaatattcataacctgtacatcagtcaaaggactaatattcagaat i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e papAnu3.chr2 59541343 1849 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11048765 97 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=297235.000000 s hg38.chrUn_KI270749v1 96480 37 + 158759 ctacaaggcactcaagcaaatcagcaagaaaaaa-acc s panTro5.chr3 201983720 37 - 202621043 ctacaaggaactcaagcaaatcagcaagaaaaaa-acc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204751740 37 - 205426864 ctacaaggaactcaagcaaatcagcaagaaaaaa-acc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568246 37 + 86207423 ctacaaggaactcaagcaaatcagcaagaaaaaa-acc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66051559 37 + 204787373 ctacaaggaactcaagcaaatcagcaagtaaaaa-acc i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60983405 37 - 192460366 ctacaaggaactcaagcaaatcagcaagtaaaaa-acc i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11095364 37 - 17224310 ctacaaggaactcaagcaaatcagcaagtaagaa-acc i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17407522 37 - 41321030 ctacaaggaactcaagaaaatcagcaagtaaaaa-acc i cerAty1.NW_012009469v1 C 0 I 1 s manLeu1.NW_012098965v1 863948 37 - 924385 ctacaaggaactcaagaaaatcagcaagtaaaaa-acc i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6707281 37 - 10587913 ctacaaggaactcaagcaaatcagcaagaaaaaa-aac i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1365004 37 - 1467263 ctacaaggaattcaagcaaatcagcaagaaaaaa-aaa i rhiRox1.KN296641v1 C 0 I 163 s calJac3.chr15 46029317 36 - 98464013 ctacaaggaactcatgcaaatcagcaagaaaaaa-ac- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27711856 34 + 27742158 ctacaaggaactcgtgcaaatcagcaagaaaaaa---- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 249237 37 - 4835464 ctacaaggaactcatgcaaatcagcaagaaaaaaaac- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3707898 36 + 4093027 ctacaaggaactcatgcaaatcagcaagaaaaaa-ac- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11048862 30 + 30473821 ctacaagaaacacatatta------aagataaag-ac- i otoGar3.GL873534 I 97 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e papAnu3.chr2 59541343 1849 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=1090593.000000 s hg38.chrUn_KI270749v1 96517 160 + 158759 aaacgactgcatcaaaa------agtgggctaaggacatgaatagataattctcaaaagaagatatacaaatggtcaacaaacacat-gaaaaatgctcaacatcaccgattatcagggaaatgcaa---atcagaatcacaatgcgataccacc--------------tcacttctgcaagaa s panTro5.chr3 201983757 160 - 202621043 aaacgattgcatcaaaa------agtgggctaaggacatgaatagataattctcaaaagaagatatacaaatggtcaacaaacacat-gaaaaatgctcaacatcaccgattatcagggaaatgcaa---atcagaatcacaatgcgataccacc--------------tcacttctgcaagaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204751777 160 - 205426864 aaacgattgcatgaaaa------agtggcctaaggacatgaatagataattctcaaaagaagatatacaaatggtcaacaaacacat-gaaaaatgctcaacatcaccgattatcagggaaatgcaa---atcagaatcacaatgcgataccacc--------------tcacttctgcaagaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568283 160 + 86207423 aaacgattgcatcaata------agtgggctaaggacatgaatagataattctcaaaagaagatatacaaatggtcaacaaacacat-gaaaaatgctcaacatcaccaattatcagggaaatgcaa---accagaatcacaatgtgataccacc--------------tcacttctgcaagaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66051597 160 + 204787373 aaacaatttcatcaaaa------agtgggataaggacattaacagataattctcaaaagatgatatacaaatggccaataaacatat-gaaaaatgctcaacatcactgattatcaggtaaatgcga---atcaaaatcacaatgtgataccatc--------------tcacctctgcaagaa i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60983443 160 - 192460366 aaacaatttcatcaaaa------agtgggataaggacattaatagataattctcaaaagatgatatacaaatggccaataaacatat-gaaaaatgctcaacatcactgattatcaggtaaatgcga---atcaaaatcacaatgtgataccatc--------------tcacctctgcaagaa i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11095402 160 - 17224310 aaacaatttcatcaaaa------agtgggataaggacattaatagataattctcaaaagatgatatacaaatggccaataaacatat-gaaaaatgctcaacatcactgattatcaggtaaatgtga---atcaaaatcacaatgtgataccatc--------------tcacctctgcaagaa i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17407560 160 - 41321030 aaacaatttcatcaaaa------agtgggataaggacattaatagataattctcagaagaagatatacaaatggccaataaacatat-gaaaaatgctcaacatcactgattatcaggtaaatgcaa---atcaaaatcacaatgtgataccatc--------------tcacttctgcaagaa i cerAty1.NW_012009469v1 I 1 C 0 s manLeu1.NW_012098965v1 863986 160 - 924385 aaacaatttcatcaaaa------agtgggataaggagattaatagataattctcagaagaagatatacaaatggccaataaacatat-gaaaaatgctcaacatcactgattatcaggtaaatgcaa---atcaaaatcacaatgtgatatcatc--------------tcacttctgcaagaa i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6707319 160 - 10587913 aaacaatttcatcaaaa------agtgggataacgacattaatagataattctcaatagaagatatgcaaatggccaataaacatat-gaaaaatgctcaacatcactgattatcaggtaaatgcaa---atcaaaatcacaatgtgataccata--------------tcacttctgcaagaa i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46029353 159 - 98464013 aaacaatttcatcaaaa------agtgggctaaggacatgaatatataattctcaaaagtagatttacaaatggccaacaaacatg--aaaaaatgctcaacatcaaagattatcaggaaaatgcaa---atcaaaaccacaatatgatacaaac--------------tcactacagcatgaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27711890 161 + 27742158 aaacaatttcatcaaaa------agtgggctaaggacatgaatatataattctcaaaagtagatttacaaatggccaacaaacatattaaaaaatgctcaacatcactgattatcaggaaagtgcaa---atgaaaaccacagtgtgataccaac--------------tcactacagcaagaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 249274 160 - 4835464 aaacagtttcatcaaac------agtgggctaa-gacatgaatatataatacccaaaagtagatttacaaatggccaacaaacataaaaaaaaatgctcaacatgactgattatcaggaaaatgcaa---atcaaaaccacagtgtgataccaac--------------tcactacagcaagaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3707934 161 + 4093027 aaacaatttcatcaaaa------agtgaactaaggacatgaatatataattctcaaaagtagatttacaaatggccaacaaacatatgaaaaaatgctcaacatcgctgattatcaggaaaatgcaa---atcaaaaccacagtgtgataccaac--------------tcactacaacaagaa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11048892 166 + 30473821 --acgtatagattaaaagtaactggtggt---------tagatataccatgctcatgttaatttttaaaaaggg--agtaggtatat----taattttagacagaatagacta-cagatcaaaggaagttatcaaggttaaaaaggaatattacataatgataaaagagtcagttctcatagaa i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365041 163 - 1467263 I e papAnu3.chr2 59541343 1849 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69638950 1844 + 202140232 I e rhiBie1.NW_016820128v1 1216754 2375 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=10424.000000 s hg38.chrUn_KI270749v1 96677 1 + 158759 t s panTro5.chr3 201983917 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204751937 1 - 205426864 t i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69640794 1 + 202140232 t i ponAbe2.chr3 I 1844 I 335 s nomLeu3.chr21 67568443 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66051757 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983603 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095562 1 - 17224310 t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17407720 1 - 41321030 t i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 864146 1 - 924385 t i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707479 1 - 10587913 t i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1219129 1 - 2311269 t i rhiBie1.NW_016820128v1 I 2375 I 3937 s calJac3.chr15 46029512 1 - 98464013 t i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712051 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 249434 1 - 4835464 t i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3708095 1 + 4093027 t i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11049058 1 + 30473821 c i otoGar3.GL873534 C 0 I 7 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365041 163 - 1467263 I e papAnu3.chr2 59541343 1849 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=12376.000000 s hg38.chrUn_KI270749v1 96678 1 + 158759 t s panTro5.chr3 201983918 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204751938 1 - 205426864 t i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568444 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66051758 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983604 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095563 1 - 17224310 t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17407721 1 - 41321030 t i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59543192 1 + 187378091 t i papAnu3.chr2 I 1849 I 337 s manLeu1.NW_012098965v1 864147 1 - 924385 t i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707480 1 - 10587913 t i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1365204 1 - 1467263 t i rhiRox1.KN296641v1 I 163 I 338 s calJac3.chr15 46029513 1 - 98464013 t i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712052 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 249435 1 - 4835464 t i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3708096 1 + 4093027 t i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11049066 1 + 30473821 t i otoGar3.GL873534 I 7 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69640795 335 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=1724142.000000 s hg38.chrUn_KI270749v1 96679 265 + 158759 gtcgttatc-aaaaaatcaaaaaaa-t----------agatattggcatggatctgatgaaaagggaacacttttacattgttagtggggatgtaaactagt--acaaccactgtgggaaactgtgtg----gagattccttaaagaattgaaagtagatctatcatttgattcagcaatcctactcctgg------gtaactacccataggtaaataagtcattattc-aaaaaagatacttgtacacacatgtttatagcagcacaattcacaatt------gcaaacatatgg s panTro5.chr3 201983919 266 - 202621043 gtcataatc-aaaaaataaaaaaaaat----------agatatcggcatggatctgatgaaaagggaacacttttacactgttagtggggatgtaaactagt--acaaccactatgggaaactgtgtg----gagattccttaaagaattgaaagtagatctatcatttgattcggcaatcctactcctgg------gtacctgcccataggtaaataagtcattattc-aaaaaagatacttgtacacacatgtttatagcagcacaattcacaatt------gcaaacatatgg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204751939 267 - 205426864 gtcataatc-aaaaaaataaaaaaaat----------agatattggcatggatctgatgaaaagggaacacttttacactgttagtggggatgtaaactagt--acaaccactatgggaaactgtgtg----gagattccttaaagaattgaaagtagatctatcatttgattcagcaatcctgctcctgg------gtatctacccataggtaaataagtcattattcaaaaaaaggtacttgtacacacatgtttatagcagcacaattcacaatt------gcaaacatatgg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568445 263 + 86207423 gtcataatc-aaaaaatcaaaaaaa-t----------agatatcggcatggatctgatgaaaagggaacacttttacaccgttagtggggatgtaaactagt--acaaccactatgggaaactgtgta----gagattccttaaagaattaaaagtagatctatcatttgattcagcaatcctactcctgg------gtatctacccagaggtaaataagtcattattc-aaaaaagatacttggagacac--gtttatagcagcacaattcacaatt------gcaaacatatgg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66051759 264 + 204787373 gtcataatc-aaaaaaataaaaaa--t----------atacattggcatggatctgacgaaaaaggaatgcttttacgctgttggtgggaatgtaaactagt--acaaccactatgggaaactgtgtg----gagattccttaaagaattaaaagtagatctataatttgattcagcaatcctacacctag------gtatctacccagaggtaaataagtcattattc-ataaaagatacttgtacacacatgtttatagcagcacaattcacaatt------gcaaacatatgg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983605 264 - 192460366 gtcataatc-aaaaaaataaaaaa--t----------atacattggcatggatctgacgaaaaaggaatgcttttacgctgttggtgggaatgtaaactagt--acaaccactatgggaaactgtgtg----gagattccttaaagaattaaaagtagatctataatttgattcagcaatcctacacctag------gtatctacccagaggtaaataagtcattattc-ataaaagatacttgtacacacatgtttatagcagcacaattcacaatt------gcaaacatatgg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095564 265 - 17224310 gtcataatcaaaaaaaataaaaaa--t----------atacattggcatggatctgacgaaaaaggaatgcttttacgctgttggtgggaatgtaaactagt--acaaccactatgggaaactgtgtg----gagattccttaaagaattaaaagtagatctataatttgattcagcaatcctacacctag------gtatctacccagaggtaaataagtcattattc-ataaaagatacttgtacatacatgtttatagcagcacaattcacaatt------gcaaacatatgg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17407722 264 - 41321030 gtcataatc-aaaaaaataaaaaa--t----------atatattggcatggatctgacgaaaaaggaacgcttttacgctgttggtgggaatgtaaactagt--acaaccactatgggaaactgtgtg----gagattccttaaagaattaaaagtagatctataatttgattcagcaatcctacacctag------gtatctacccagaggtaaataagtcatttttc-ataaaagatacttgtacacacacgtttatagcagcacaattcacaatt------gcaaacatatgg i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 864148 264 - 924385 gtcataatc-aaaaaaataaaaaa--t----------atatattggcatggatctgacgaaaaaggaacgcttttacactgttggtgggaatgtaaactagt--acaaccactatgggaaactgtgtg----gagattccttaaagaattgaaagtagatctataatttgattcaacaatcctacacctag------gtatctacccagaggtaaataagtcattattc-ataaaagatacttgtacacacacgtttatagcagcacaattcacaatt------gcgaacatatgg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707481 264 - 10587913 gtcataatc-aaaaaaataaaaaa--t----------atatattggcattgatctgatgaaaaaggaatgcttttacactgttggtgagaatgtaaactagt--acaaccactatgggaaactgtgtg----gagattccttaaagaattaaaagtagatctataatttgattcagcaatcctacacctag------gtatctacccagaggtaaataagtcattattc-ataaaagatacttgtacacacatgtttatagcagcacaattcacaatt------gcaaacatatgg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46029514 266 - 98464013 aacataata-aaaaaataaataaa--t------aaatagatgttggcatggatgtgaggaacagggaacacttttacactgttggtgagaatgtaaactagt--acaaccactgtgggaaactttgtg----gatattccttaaataattaaaagtagatctattatttgattcagcaatccttcttctggattcttctatctaacccagtgtaaagaagtcattatat-aaaaa--------gtacacacatctttatagcagcacagttcacaatt------gcaaacataggg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712053 264 + 27742158 atcataatc-aaaaaataaaaaaa--ttttaaaaaatagatgttggcatggatgtgaggaaaagggagcacgtttacaacgttgatgagaacgtaaact--t--acaaccactatgggaaactttgtg----gatattccttaaataattaaaagtagatctgttatttgattcagcaatccttcttctgg------ttatctatcccaatgtaaagaagtcattatac-aaaaa--------gtacacacatctttatagcagcacagttcacaatt------gcaaacatatgg i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 249436 263 - 4835464 atcataatc-aaaataaataataa--t---aaaaaatagatgttggcatggatgtgaggaaaagggaacacttttacactgttgatgagaatgtaaactagc--acaaccactatgggaaactttgtg----gatattccttaaataattaaaattagatctattatttgattcagcaatccatcttctgg------gtgtctaccccaatgtaaagaagtcattatac-aaaag--------gcacacacatctttatagcagcacagttcacaatt------gcaaacatatgg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3708097 264 + 4093027 atcataatc-aaaaaataaaaaaa--t--aaaaaaatagatgttggcacgaatgtgaggaaaagggaacacttttgcactgttggtgagaatgtaaactagt--atgaccactatgggaaactttgtg----gctattccttaaataattaaaagtagatctattatttgattcagcaatccttcttctgg------gtatctaccccaatgtaaagaagtcattatac-aaaaa--------gtacacacatctttataacagcacagttcacaatt------gcaaacatatag i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11049067 224 + 30473821 gtggctaac-aacagagcatcaga-------------agacatgaggcaaaatctaatagaa-------------------ctgatagggaaatagaggaatagacaatcgtagcggaaaatctcttgatcagaaattacagctgcaatcggcaaaatatccataa---aacatagcaat----------a------tcaattaattggatataattga-----tatac-aga----------gtggccacaaatttat----gtgcaatttaaagtttgtgtgaagaacatatag i otoGar3.GL873534 C 0 I 134 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365205 338 - 1467263 I e papAnu3.chr2 59543193 337 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69640795 335 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=196709.000000 s hg38.chrUn_KI270749v1 96944 25 + 158759 aaccagcccaaatgccatcaatcaa s panTro5.chr3 201984185 25 - 202621043 aaccagcccaaatgccatcaatcaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752206 25 - 205426864 aaccagcccaaatgccatcaatcaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568708 25 + 86207423 aaccagcccaaatgccatcaatcaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052023 25 + 204787373 aaccagcccaaatgtcatcaatcaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983869 25 - 192460366 aaccagcccaaatgtcatcaatcaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095829 25 - 17224310 aaccagcccaaatgtcatcaatcaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17407986 25 - 41321030 aaccagcccaaatgtcatcaatcaa i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 864412 25 - 924385 aaccagcccaaatgtcatcaatcaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707745 25 - 10587913 aaccagcccaaatgtcatcaatcaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46029780 25 - 98464013 aaccagcccaaatgctgtcaatcaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712317 25 + 27742158 aaccagcccaaatgctgtcaatcaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 249699 25 - 4835464 aaccagcccaaatgctgtcaatcaa i cebCap1.NW_016107467v1 C 0 I 484 s aotNan1.NW_018502033v1 3708361 25 + 4093027 aaccagcccaaatgctgtaaatcaa i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365205 338 - 1467263 I e papAnu3.chr2 59543193 337 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69640795 335 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=53787.000000 s hg38.chrUn_KI270749v1 96969 9 + 158759 cagtggata s panTro5.chr3 201984210 9 - 202621043 cagtggata i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752231 9 - 205426864 cggcggata i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568733 9 + 86207423 cagtggata i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052048 9 + 204787373 cagtggata i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983894 9 - 192460366 cagtggata i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095854 9 - 17224310 cagtggata i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408011 9 - 41321030 cagtggata i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 864437 9 - 924385 cagtggata i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707770 9 - 10587913 cagtggata i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46029805 9 - 98464013 tggtgaata i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712342 9 + 27742158 tggtagata i saiBol1.JH378125 C 0 C 0 s aotNan1.NW_018502033v1 3708386 9 + 4093027 tggtggata i aotNan1.NW_018502033v1 C 0 I 443 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365205 338 - 1467263 I e papAnu3.chr2 59543193 337 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69640795 335 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e cebCap1.NW_016107467v1 249724 484 - 4835464 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=118142.000000 s hg38.chrUn_KI270749v1 96978 38 + 158759 aagaaaatgtgatatagatatatgtgtgta----------------tatatata------- s panTro5.chr3 201984219 38 - 202621043 aagaaaatgtgatatcgatatatgtgtgta----------------tatatata------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752240 38 - 205426864 aagaaaatgtgatatagatatatgtgtgta----------------tatatata------- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568742 38 + 86207423 aagaaaatgtgatatagatatatgtgtgta----------------tatatata------- i nomLeu3.chr21 C 0 I 9 s rheMac8.chr2 66052057 38 + 204787373 aagaaaatgtgatatagatatgtgtgtgtg----------------tgtgtgtg------- i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60983903 38 - 192460366 aagaaaatgtgatatagatatgtgtgtgtg----------------tgtgtgta------- i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11095863 38 - 17224310 aagaaaatgtgatatagatatgtgtgtgtg----------------tgtgtata------- i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17408020 38 - 41321030 aagaaaatgtgatatagatatgtgtgtgtg----------------tgtgtgtg------- i cerAty1.NW_012009469v1 C 0 I 1 s manLeu1.NW_012098965v1 864446 38 - 924385 aagaaaatgtgatatagatatgtgtgtgtg----------------tgtatata------- i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6707779 38 - 10587913 aagaaaatgtgatatagatatgtgtgtgtg----------------tgtgtgtg------- i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46029814 51 - 98464013 ----------Catatctacatatatatatatctctctacatatatatatacacacactttg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712351 19 + 27742158 ----------cata--------------------------------tatatacacactttg i saiBol1.JH378125 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365205 338 - 1467263 I e papAnu3.chr2 59543193 337 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69640795 335 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e aotNan1.NW_018502033v1 3708395 443 + 4093027 I e cebCap1.NW_016107467v1 249724 484 - 4835464 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=-13394.000000 s hg38.chrUn_KI270749v1 97016 2 + 158759 -aa s panTro5.chr3 201984257 2 - 202621043 -aa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752278 2 - 205426864 -aa i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69641130 2 + 202140232 -aa i ponAbe2.chr3 I 335 C 0 s nomLeu3.chr21 67568789 2 + 86207423 -aa i nomLeu3.chr21 I 9 C 0 s rheMac8.chr2 66052096 1 + 204787373 -a- i rheMac8.chr2 I 1 I 15 s macFas5.chr2 60983942 1 - 192460366 -a- i macFas5.chr2 I 1 I 15 s macNem1.NW_012018021v1 11095902 1 - 17224310 -a- i macNem1.NW_012018021v1 I 1 I 39 s cerAty1.NW_012009469v1 17408059 1 - 41321030 -g- i cerAty1.NW_012009469v1 I 1 I 21 s manLeu1.NW_012098965v1 864485 1 - 924385 -g- i manLeu1.NW_012098965v1 I 1 I 1061 s colAng1.NW_012114711v1 6707818 1 - 10587913 -g- i colAng1.NW_012114711v1 I 1 I 23 s calJac3.chr15 46029865 2 - 98464013 aa- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712370 2 + 27742158 aa- i saiBol1.JH378125 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365205 338 - 1467263 I e papAnu3.chr2 59543193 337 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e aotNan1.NW_018502033v1 3708395 443 + 4093027 I e cebCap1.NW_016107467v1 249724 484 - 4835464 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=2711.000000 s hg38.chrUn_KI270749v1 97018 3 + 158759 ata s panTro5.chr3 201984259 3 - 202621043 ata i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752280 3 - 205426864 ata i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69641132 2 + 202140232 at- i ponAbe2.chr3 C 0 I 3523 s nomLeu3.chr21 67568791 3 + 86207423 ata i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052112 3 + 204787373 gtg i rheMac8.chr2 I 15 C 0 s macFas5.chr2 60983958 3 - 192460366 gtg i macFas5.chr2 I 15 C 0 s cerAty1.NW_012009469v1 17408081 3 - 41321030 gtg i cerAty1.NW_012009469v1 I 21 C 0 s calJac3.chr15 46029867 3 - 98464013 atg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712372 3 + 27742158 atG i saiBol1.JH378125 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365205 338 - 1467263 I e papAnu3.chr2 59543193 337 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e manLeu1.NW_012098965v1 864486 1061 - 924385 I e macNem1.NW_012018021v1 11095903 39 - 17224310 I e aotNan1.NW_018502033v1 3708395 443 + 4093027 I e cebCap1.NW_016107467v1 249724 484 - 4835464 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e colAng1.NW_012114711v1 6707819 23 - 10587913 I e chlSab2.chr22 64479100 788 - 101219884 I a score=10971.000000 s hg38.chrUn_KI270749v1 97021 4 + 158759 tata s panTro5.chr3 201984262 4 - 202621043 tata i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752283 4 - 205426864 tata i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568794 4 + 86207423 tata i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052115 4 + 204787373 tgta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983961 4 - 192460366 tgta i macFas5.chr2 C 0 C 0 s cerAty1.NW_012009469v1 17408084 4 - 41321030 tgtg i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59543530 4 + 187378091 tata i papAnu3.chr2 I 337 C 0 s calJac3.chr15 46029870 4 - 98464013 tatg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712375 4 + 27742158 TGTG i saiBol1.JH378125 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365205 338 - 1467263 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e manLeu1.NW_012098965v1 864486 1061 - 924385 I e macNem1.NW_012018021v1 11095903 39 - 17224310 I e aotNan1.NW_018502033v1 3708395 443 + 4093027 I e cebCap1.NW_016107467v1 249724 484 - 4835464 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e colAng1.NW_012114711v1 6707819 23 - 10587913 I e chlSab2.chr22 64479100 788 - 101219884 I a score=23634.000000 s hg38.chrUn_KI270749v1 97025 9 + 158759 tatatatat s panTro5.chr3 201984266 9 - 202621043 tatatatat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752287 4 - 205426864 tata----- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568798 9 + 86207423 tatatatat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052119 9 + 204787373 tatatatat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983965 9 - 192460366 tatatatat i macFas5.chr2 C 0 C 0 s cerAty1.NW_012009469v1 17408088 9 - 41321030 tatatatat i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59543534 9 + 187378091 tgtgtgtgt i papAnu3.chr2 C 0 C 0 s rhiRox1.KN296641v1 1365543 9 - 1467263 tgtgtgtgt i rhiRox1.KN296641v1 I 338 I 3267 s calJac3.chr15 46029874 9 - 98464013 tgtatataa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712379 9 + 27742158 TGTATATAT i saiBol1.JH378125 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e manLeu1.NW_012098965v1 864486 1061 - 924385 I e macNem1.NW_012018021v1 11095903 39 - 17224310 I e aotNan1.NW_018502033v1 3708395 443 + 4093027 I e cebCap1.NW_016107467v1 249724 484 - 4835464 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e colAng1.NW_012114711v1 6707819 23 - 10587913 I e chlSab2.chr22 64479100 788 - 101219884 I a score=2300.000000 s hg38.chrUn_KI270749v1 97034 1 + 158759 a s panTro5.chr3 201984275 1 - 202621043 a i panTro5.chr3 C 0 C 0 s nomLeu3.chr21 67568807 1 + 86207423 a i nomLeu3.chr21 C 0 I 3 s rheMac8.chr2 66052128 1 + 204787373 a i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60983974 1 - 192460366 a i macFas5.chr2 C 0 I 1 s cerAty1.NW_012009469v1 17408097 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 I 1 s papAnu3.chr2 59543543 1 + 187378091 g i papAnu3.chr2 C 0 I 27 s calJac3.chr15 46029883 1 - 98464013 a i calJac3.chr15 C 0 I 19 s saiBol1.JH378125 27712388 1 + 27742158 A i saiBol1.JH378125 C 0 I 15 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e manLeu1.NW_012098965v1 864486 1061 - 924385 I e macNem1.NW_012018021v1 11095903 39 - 17224310 I e aotNan1.NW_018502033v1 3708395 443 + 4093027 I e cebCap1.NW_016107467v1 249724 484 - 4835464 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e colAng1.NW_012114711v1 6707819 23 - 10587913 I e chlSab2.chr22 64479100 788 - 101219884 I e panPan2.chr3 204752291 0 - 205426864 C a score=8745.000000 s hg38.chrUn_KI270749v1 97035 2 + 158759 at s rheMac8.chr2 66052130 2 + 204787373 at i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60983976 2 - 192460366 at i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11095942 2 - 17224310 gt i macNem1.NW_012018021v1 I 39 C 0 s cerAty1.NW_012009469v1 17408099 2 - 41321030 at i cerAty1.NW_012009469v1 I 1 C 0 s papAnu3.chr2 59543571 2 + 187378091 gt i papAnu3.chr2 I 27 C 0 s manLeu1.NW_012098965v1 865547 2 - 924385 gt i manLeu1.NW_012098965v1 I 1061 C 0 s colAng1.NW_012114711v1 6707842 2 - 10587913 at i colAng1.NW_012114711v1 I 23 C 0 s calJac3.chr15 46029903 2 - 98464013 at i calJac3.chr15 I 19 C 0 s saiBol1.JH378125 27712404 2 + 27742158 at i saiBol1.JH378125 I 15 C 0 s cebCap1.NW_016107467v1 250208 2 - 4835464 AT i cebCap1.NW_016107467v1 I 484 C 0 s aotNan1.NW_018502033v1 3708838 2 + 4093027 at i aotNan1.NW_018502033v1 I 443 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I e nomLeu3.chr21 67568808 3 + 86207423 I e panPan2.chr3 204752291 0 - 205426864 C e panTro5.chr3 201984276 0 - 202621043 C a score=11521.000000 s hg38.chrUn_KI270749v1 97037 2 + 158759 at s nomLeu3.chr21 67568811 2 + 86207423 at i nomLeu3.chr21 I 3 C 0 s rheMac8.chr2 66052132 2 + 204787373 at i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983978 2 - 192460366 at i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095944 2 - 17224310 at i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408101 2 - 41321030 at i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59543573 2 + 187378091 gt i papAnu3.chr2 C 0 I 3273 s manLeu1.NW_012098965v1 865549 2 - 924385 gt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707844 2 - 10587913 at i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46029905 2 - 98464013 at i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712406 2 + 27742158 at i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 250210 2 - 4835464 AT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3708840 2 + 4093027 at i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I e panPan2.chr3 204752291 0 - 205426864 C e panTro5.chr3 201984276 0 - 202621043 C a score=74928.000000 s hg38.chrUn_KI270749v1 97039 17 + 158759 atatatatatatataaa s panTro5.chr3 201984276 8 - 202621043 ---------tatatata i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752291 8 - 205426864 ---------tatataaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568813 17 + 86207423 atatatatatatataaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052134 17 + 204787373 atatatatatatatgaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983980 17 - 192460366 atatatatatatatgaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095946 17 - 17224310 atatatatatatatgaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408103 17 - 41321030 atatatatatatatata i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 865551 17 - 924385 gtgtgtgtgtatatata i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707846 17 - 10587913 atatatatatatatata i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46029907 17 - 98464013 atatatatatatatagt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27712408 17 + 27742158 atatatatatacatata i saiBol1.JH378125 C 0 I 400 s cebCap1.NW_016107467v1 250212 17 - 4835464 ATGTAtatatacacact i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3708842 17 + 4093027 atgtatatatacacact i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=25662.000000 s hg38.chrUn_KI270749v1 97056 3 + 158759 atg s panTro5.chr3 201984284 3 - 202621043 atg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752299 3 - 205426864 atg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568830 3 + 86207423 atg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052151 3 + 204787373 atg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60983997 3 - 192460366 atg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095963 3 - 17224310 atg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408120 3 - 41321030 atg i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 865568 3 - 924385 atg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707863 3 - 10587913 atg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46029924 3 - 98464013 atg i calJac3.chr15 C 0 I 10983 s saiBol1.JH378125 27712825 3 + 27742158 atg i saiBol1.JH378125 I 400 C 0 s cebCap1.NW_016107467v1 250229 3 - 4835464 atg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3708859 3 + 4093027 atg i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e chlSab2.chr22 64479100 788 - 101219884 I a score=115716.000000 s hg38.chrUn_KI270749v1 97059 17 + 158759 aaatactactcagccat s panTro5.chr3 201984287 17 - 202621043 aaatactactcagccat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752302 17 - 205426864 aaatattactcagccat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568833 17 + 86207423 aaatactactcagccat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052154 17 + 204787373 aaatactactcagccat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984000 17 - 192460366 aaatactactcagccat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095966 17 - 17224310 aaatactactcagccat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408123 17 - 41321030 aaatactactcagccat i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 865571 17 - 924385 aaatactactcagccat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707866 17 - 10587913 aaatactactcagccat i colAng1.NW_012114711v1 C 0 C 0 s saiBol1.JH378125 27712828 17 + 27742158 aaatactactcagctgt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 250232 17 - 4835464 aaatactactcagctgt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3708862 17 + 4093027 aaatactactcagctgt i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e otoGar3.GL873534 11049291 134 + 30473821 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e calJac3.chr15 46029927 10983 - 98464013 I e chlSab2.chr22 64479100 788 - 101219884 I a score=1694855.000000 s hg38.chrUn_KI270749v1 97076 286 + 158759 acaaaggaacaa-aataatgaca-tttgagcaacct---tggaattggataccattattctaagtgaagcaactcaggaatggaaaaccaaacatcatatgttcttactcataagtgggagctaagctatga---tgatgcaaaggcataagaatgatataatagactttggggattttgggggaaagggtgggaggaggttgagggataaaacactacatagatattgggtacagtgtacgctgcttgggtgatcggttcaccaaaatctcagaaatcgcaaataaagaattt s panTro5.chr3 201984304 286 - 202621043 acaaaggaacaa-aataatgaca-tttgagcaacct---tggaattggataccattattctaagtgaagcaactcaggaatggaaaaccaaacatcatatgttctcactcataagtgggagctaagctatga---tgatgcaaaggcataagaatgatataatagactttggggattttgggggaaagggtgggaggaggttgagggataaaacactacatagatattgggtacagtgtacgctgcttgggtgatgggttcaccaaaatctcagaaatcgccaataaagaattt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752319 286 - 205426864 acaaaggaacaa-aataatgaca-tttgagcaacct---tggaattggataccattattctaagtgaagcaactcaggaatggaaaaccaaacatcatatgttctcactcataagtgggagctaagctatga---tgatgcaaaggcataagaatgatataatagactttggggattttgggggaaagggtgggaggaggttgagggataaaacactacatagatattgggtacagtgtacgctgcttgggtgatgggttcaccaaaatctcagaaatctccaataaagaattt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67568850 285 + 86207423 acaaaggaacaa-aataatgaca-tttgagcaacct---tggaattggataccattattctaagtgaagcaactcaggaatggaaaaccaaacatcatatgttctcactcataagtaggagctaagctatga---ggatgcaaaggcataagaatgatacaatagactttgggga-tttggggggaagggtgggaggaggttgagggataaagcactacatagatgttgggtacagtgtacactgcttgggtgatgggctcaccaaaatctcagaaatcaccactaaagaattt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052171 289 + 204787373 agaaaggaacaa-aataatgacattttgagcaacctggatggaattggagaccattattctaagtgaagccactcaggaatggaaaaccaaacatcatatattctcactcataagtgggagctaagctatga---ggatgcaaagacataagaatgatataataaactttgggga-tttgggggaaagagtggaaggagggtgaggacgaaaacactacatagacattgggtacagtgtacacttcttgggtgatgagtgcaccaaaatctcagaaatcacaattaaagaatta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984017 289 - 192460366 agaaaggaacaa-aataatgacattttgagcaacctggatagaattggagaccattattctaagtgaagccactcaggaatggaaaaccaaacatcacatattctcactcataagtgggagctaagctatga---ggatgcaaagacataagaatgatataataaactttgggga-tttgggggaaagagtggaaggagggtgaggacgaaaacactacatagacattgggtacagtgtacacttcttgggtgatgagtgcaccaaaatctcagaaatcacaattaaagaatta i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11095983 289 - 17224310 agaaaggaacaa-aataatgacattttgagcaacctggatggaactggagaccattattctaagtgaagcaactcaggaatggaaaaccaaacatcacatattctcactcataagtgggagctaagctatga---ggatgcaaagacataagaatgatataataaactttgggga-tttgggggaaagagtggaaggagggtgaggacgaaaacactacatagacattgggtacagtgtacacttcttgggtgatgagtgcaccaaaatctcagaaatcacaattaaagaatta i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408140 289 - 41321030 agaaaggaacaa-aataatgacattttgagcaacctggatggaattggagaccattattctaagtgaagccactcaggaatggaaaaccaaacatcacatattctcactcataagtgggagctaagctatga---ggatgcaaagacataagaatgatataataaactttgggga-tttggaggaaagagtggaaggagggtgaggacgaaaacactacatagacattgggtacagtgtacacttcttgggtgatgagtgcaccaaaatctcagaaatcacaattaaagaatta i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 865588 289 - 924385 agaaaggaacaa-aataatggcattttgagcaacctggatggaattggagaccattactctaagtgaagccactcaggaatggaaaaccaaacatcacatattctcacttataagtgggagctaagctatga---ggatgcaaagacgtaagaatgatataataaactttgggga-tttgggggaaagagtggaaggagggtgaggacgaaaacactacatagacattgggtacagtgtacacttcttgggtgatgagtgcaccaaaatctcagaaatcacaattaaagaatta i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6707883 289 - 10587913 aaaaaggaacaa-aataatgacattttgagcaacctggatggaattggagaccattattctaagtgaagccactcaggaatggaaaaccaaacatcacatattctcattcataagtgggagctaagctatga---ggatgcaaagacataagaatgatataataaactttgtgga-tttggggaaaagagtggaaggagggtgaggatgaaaacactacatagacgttgggtacagtgtacactgcttgggtgatgagtgcaccaaaatctcagaaatcaccactaaagaatta i colAng1.NW_012114711v1 C 0 C 0 s saiBol1.JH378125 27712845 283 + 27742158 aaaaaggaacaa-aataatgacg-tttga-ccatctggatggaattggagatcattattctaagtgaagcaactcaggaatggaaaagcaaacatcgtatgttctcactcataagtgagaggtaagctatga---ggatgcataggcataagaatgatatcatgaactct-gggacttggaggaaaagggtgaga----ggtgagggacaaaacatcacatagaccttgggtacagtgtaaactgctcaggcgatgggcacaccaaaatctccaaaatcaccagtaaagaattt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 250249 288 - 4835464 aaaaaggagcaa-aataatgaca-tttga-ccatctggatggaattgaagatcattattctaagtgaagcaactcaggaatggaaaagcaaacattgtatgttctcactcataagtgagagctaagctatga---ggatgcataggtataggaatgatataatggactctggggacttggaggaaaagggtgagaggagggtgagggacaaaacattacatagacattgggtacagtgtacactgcccgggtgatgggcacaccaaaatctcaaaaatcaccagtaaagaattt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3708879 288 + 4093027 aaaaaggaacaa-aataatgaca-tttga-ctatctggatggaattggagaacattattctaagtgaagcaactcaggaatggaaaagcaaacatcgtatgttctcactcataagtgagagttaagctatga---ggatgcataggcataagaatgatataacgaactctggggacttagaggaaaagggtgagaggagggtgagggacaaaacattacatagacattgggtacagtgtacactgctcgggtgatgggtacactaaaatctcaaaaatcaccagtaaagaattt i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11049425 224 + 30473821 ataacagaacgataactagaaaaccctaaaacactt---tgtgattcaatacta-----cacaatgaaataacacatgggtcaaaaataaa------------tttttttaaaagaaagaaata--ttttgaattaaatgaaaaga---aagtacaacttacaaaa----------tgtgtgggatgccttgaaagcagtgt-------------ttacagggagatt---tatagcactaactgcat----------------atagtattagaaa---caaaaaaaagatct i otoGar3.GL873534 I 134 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e calJac3.chr15 46029927 10983 - 98464013 I e chlSab2.chr22 64479100 788 - 101219884 I a score=342217.000000 s hg38.chrUn_KI270749v1 97362 51 + 158759 attcatgtagccaaacaccacctgtttcccaaaaacttattaaatt---taaaa s panTro5.chr3 201984590 51 - 202621043 attcatgtagccaaacaccacctgtttcccaaaaacttattaaaat---taaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752605 51 - 205426864 attcatgtagccaaacaccacctgtttcccaaaaacttattacaat---taaaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569135 51 + 86207423 attcatgtagccaaataccacctgtttccaaaaaacttattaaaat---ttaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052460 51 + 204787373 attcatgtagccaaacaccacctgtttcccaaaaacttattaaaat---agaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984306 51 - 192460366 attcatgtagccaaacaccacctgtttcccaaaaacttattaaaat---agaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096272 50 - 17224310 attcatgtagccaaacaccacctgtttcccaaaaacttattaaaat---a-aaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408429 51 - 41321030 attcatgtagccaaacaccacctgtttcccaaaaacttattaaaat---taaaa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64479888 54 - 101219884 attcatgtagccaaacaccacctgtttcccaaaaacttattaaaataaaaaaaA i chlSab2.chr22 I 788 C 0 s manLeu1.NW_012098965v1 865877 53 - 924385 attcatgtagccaaacaccacctgtttcccaaaaacttattaaaat-aaaaaaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708172 49 - 10587913 attcatgtagccaaacaccacctgtttcccaaaaacttattaaaat-----aaa i colAng1.NW_012114711v1 C 0 C 0 s saiBol1.JH378125 27713128 51 + 27742158 attcatgtaaccaaacactacctgtttcccaaaaatctatcaaaat---ttaaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 250537 51 - 4835464 attcatgtaaccaaataacacctgtttcccaaaaatctatcaaaat---ttaaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709167 51 + 4093027 attcacctaaccaaacaccacctgtttcccaaaaatttatcaaaat---taaaa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11049649 31 + 30473821 ------ataatcaattacc-taagtttccc-------ctttagaa--------- i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 137317 11259 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e calJac3.chr15 46029927 10983 - 98464013 I a score=10920.000000 s hg38.chrUn_KI270749v1 97413 1 + 158759 a s panTro5.chr3 201984641 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752656 1 - 205426864 a i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569186 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052511 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984357 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096322 1 - 17224310 a i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408480 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64479942 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 865930 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708221 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s saiBol1.JH378125 27713179 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 250588 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709218 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 148576 1 + 958716 a i tarSyr2.KE939134v1 I 11259 I 16285 s otoGar3.GL873534 11049680 1 + 30473821 a i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e calJac3.chr15 46029927 10983 - 98464013 I a score=173728.000000 s hg38.chrUn_KI270749v1 97414 34 + 158759 aAAT--TAATc-accttagaaaagtagaacaaaagca s panTro5.chr3 201984642 33 - 202621043 aa-t--taatc-accttagaaaactagaacaaaagca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752657 33 - 205426864 aa-t--taatc-accttagaaaactagaacaaaagca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569187 33 + 86207423 aa-T--TAATc-accttagaaaactagaacaaaagca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052512 30 + 204787373 aA------GTc-accttagaaaactagaacaaaagca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984358 30 - 192460366 aA------GTc-accttagaaaactagaacaaaagca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096323 30 - 17224310 aa------GTc-accttagaaaactagaacaaaagca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408481 30 - 41321030 aA------GTc-accttagaaaactagaacaaaagca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64479943 30 - 101219884 AA------ATc-accttagaaaactagaacaaaagca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 865931 30 - 924385 AA------GTc-accttagaaaactagaacaaaagca i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708222 30 - 10587913 aa------aTc-accttagaaaactggaacaaaagca i colAng1.NW_012114711v1 C 0 C 0 s saiBol1.JH378125 27713180 36 + 27742158 aa-TAATAATCTTccttagaaaactagagcaaaagca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 250589 36 - 4835464 aa-TAATAATCTTccttagaaaactagagcaaaagca i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709219 36 + 4093027 aA-TAATAATCTTccttagaaaactagagcaaaagca i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11049681 20 + 30473821 --------------actagaaaaacaa---aagagca i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e mm10.chr6 45740732 10290 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e calJac3.chr15 46029927 10983 - 98464013 I a score=435265.000000 s hg38.chrUn_KI270749v1 97448 47 + 158759 aattaaatccaaagtaagcataggaaaataaattaaaattagagtag s panTro5.chr3 201984675 47 - 202621043 aattaaatccaaagtaagcataggaaaataaattaaaattagagtag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752690 47 - 205426864 aattaaatccaaagtaagcataggaaaataaattaaaattagagtag i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569220 47 + 86207423 aattaaatccaaagtaagcataggaaaataaattaacattagagtag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052542 47 + 204787373 aatcaaatccaaaataagcagaggaaaataaattaaaattagagtag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984388 47 - 192460366 aatcaaatccaaaataagcagaggaaaataaattaaaattagagtag i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096353 47 - 17224310 aattaaatccaaaataagcagaggaaaataaattaaaattagagtag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408511 47 - 41321030 aattaaatccaaaataagcagaggaaaataaattaaaattagagtag i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64479973 47 - 101219884 aattaaatccaaagtaagcagaggaaaataaattaaaattagagtag i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 865961 47 - 924385 aattaaatccaaaataagcagaggaaaataaattaaaattagagtag i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708252 47 - 10587913 aattaaattcaaagtaagcagaggaaaataaattaaaattagagtaa i colAng1.NW_012114711v1 C 0 C 0 s saiBol1.JH378125 27713216 47 + 27742158 aattaaatccaaaggaagcagagggaaataaattaaaattagagcag i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 250625 47 - 4835464 aattaaatccaaaggaagcagagggaaataaattaaaattagagcag i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709255 47 + 4093027 aattaaatccaaaggaagcagagggaaatatattaaaattagagcag i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11049701 44 + 30473821 aattaaatccaaagtaaatggaggaaaataa---agaattagagcag i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45751022 47 - 149736546 aattaagtctaaagcaatcagaagaaaataaataaaaatcagaccaa i mm10.chr6 I 10290 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I e calJac3.chr15 46029927 10983 - 98464013 I a score=1511521.000000 s hg38.chrUn_KI270749v1 97495 188 + 158759 aaataaatgaaa-taaaaatgggaaa---------tcaat-----agag-aaatcaacaaaaccagaagatgatt------ttttgaaaag---ttcaa--tt-aaa--aaaaag---cctctgg---ccagg---ttaactacgaaaTC----AGCTATTCA-----ACATTATTCA-----------CACAA---ACGAAAATAA-----CTTAAAAT--GGTATATTT---AAAATATAACTGCGGTGTACAAAGGC s panTro5.chr3 201984722 188 - 202621043 aaataaatgaaa-taaaaatgggaaa---------tcaat-----agag-aaatcaacaaaaccagaagatgatt------ttttgaaaag---ttcaa--tt-aaa--aaaaag---cctctgg---ccagg---ttaactacgaaaTC----AGATATTCA-----ACATTATTCA-----------CACAA---ACGAAAATAA-----CTTAAAAT--GGTATATTT---AAAATATAACTGCGGTGTACAAAGGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752737 187 - 205426864 aaataaatgaaa-taaaaatgggaaa---------tcaat-----agag-aaatcaacaaaaccagaagatgatt------tttttaaaag---ttcaa--tt--ta--aaaaag---cctctgg---ccagg---ttaactacgaaaTC----AGATATTCA-----ACATTATTCA-----------CACAA---ACGAAAATAA-----CTTAAAAT--GGTATATTT---AAAATATAACTGTGGTGTACAAAGGC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569267 189 + 86207423 aaataaatgaaa-taaaaataggaaa---------tcaat-----agag-aaatcaacaaaaccagaagatgatt------ttttgaaaag---ttcaa--ttaaaa--aaaaag---cctctag---ccagg---ttaattaagaaaTC----AGATATTCA-----ACATTATTCA-----------CACAA---ACGAAAATAA-----CTTAAAAT--GGTATATTT---AAAATATAACTGCAGTGTACAAAGGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052589 190 + 204787373 aaataaatgaaa-taaaaataggaaa---------tcaat-----agag-acctcaacaaaaccagaagatgatt------ctttgaaagg---tcaaa--ta-aaattgataag---catctag---ccagg---ttaactaagaaaTC----AGGTATTCA-----ACATTATTCA-----------CACAA---ACGAAAATAA-----CTTAAAGT--GGTATATTT---AAAATATAATTGCAGTGTACAAAGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984435 190 - 192460366 aaataaatgaaa-taaaaataggaaa---------tcaat-----agag-acctcaacaaaaccagaagatgatt------ctttgaaagg---tcaaa--ta-aaattgataag---catctag---ccagg---ttaactaagaaaTC----AGGTATTCA-----ACATTATTCA-----------CACAA---ACGAAAATAA-----CTTAAAGT--GGTATATTT---AAAATATAATTGCAGTGTACAAAGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096400 190 - 17224310 aaataaatgaaa-taaaaataggaaa---------tcaat-----agag-acctcaacaaaaccagaagatgatt------ctttgaaagg---tcaaa--ta-aaattgataag---catctag---ccagg---ttaactaagaaaTC----AGGTATTCA-----ACATTATTCA-----------CACAA---ACGAAAATAA-----CTTAAAGT--GGTATATTT---AAAATATAATTGCAGTGTACAAAGGC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408558 190 - 41321030 aaataaatgaaa-taaaaataggaaa---------tcaat-----agag-acctcaacaaaaccagaagatgatt------ctttgaaagg---tcaaa--ta-acattgataag---catctag---ccagg---ttaactaagaaaTC----AGGTATTCA-----ACATCATTCA-----------CACAA---ACCAAAATAA-----CTTAAAGT--GGTATATTT---AAAATATAACTGCAGTGTACAAAGGC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64480020 190 - 101219884 aaataaatgaaa-taaaaataggaaa---------tcaat-----aaag-acctcaacaaaaccagaagatgatt------ctttgaaaca---ttaaa--ta-aaattgataag---catctag---ccagg---ttaactaagaaaTC----AGGTATTCA-----ACATTATTCA-----------CACAA---ATGAAAATAA-----CTTAAAAT--GGTATATTT---AAAATATAACTGCAGTGTACAAAGGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 866008 190 - 924385 aaataaatgaaa-taaaaataggaaa---------tcaat-----agag-acctcaacaaaaccagaagatgatt------ctttgaaagg---ttaaa--ta-aaattgataag---catctag---ccagg---ttaactaagaaaTC----AGGTATTCA-----ACATTATTCA-----------CACAA---ACGAAAATAA-----CTTAAAGT--GGTATATTT---AAAATATAACTGCAGTGTACAAAGGC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708299 190 - 10587913 aaataaatgaaa-taaaaatagaaaa---------tcaat-----agag-acctcgataaaaccagaagatgatt------ctttgaaaca---ttaaa--ta-aaattgataag---catctag---ccagg---ttaactaagaaaTC----AGGTATTCA-----ACATTATTCA-----------CACAA---ACGAAAATAA-----CTTAAAAT--GGTATATTG---AAAATATAACTGCAGTGTACAAAGGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46040910 244 - 98464013 AAGAAAATAAAA-TGAAAACAAAAAATAGGGGGACCCAGGTAGGAGGAA-AATTTAACAAAAACGGAAAAAAATTAATTTCTTTTGAAAAAGGTTTCAAATAA-AAATTGAAAAAGGCCCTCTAAAGCCCAAGTTTTTACTAAAGAAATCCCGAGAAAATTCAAACATATATCCCCCA-----------CAAAACACAAAAAAGGTATA--CTTTAAAATTGGatatattttaaaatatatattGGCACAGTGTAACAAA i calJac3.chr15 I 10983 C 0 s saiBol1.JH378125 27713263 190 + 27742158 gaataaatgaaa-taaaaataggaaa---------ccagt-----agag-aaatcaacaaaaccagaagacgatt------ctttgaaaag---ttcag--ta-aaattgaaaag---cctctag---ccaag---ttaactaagaaaTC----AGATATTCA-----ATATTATTCA-----------CAAAA---ACAAAAAGTA-----CTTAAAAT--GGTATATTT---AAAATATAATTGCAATGTGCAAAATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 250672 190 - 4835464 aaataaatgaaa-taaaaatgggaaa---------ccagt-----agag-aaattaacaaaaccagaagatgatt------ctttgaaaag---ttcaa--ta-aaattgaaaag---cctctag---ccaag---ttaactaagaaaTC----AGATATTCA-----ACATTATTCA-----------CCCAA---ACAAAAAGTA-----CTTAAAAT--GGTATATTG---AAAAGATAATTGCAGTGTACAAAAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709302 190 + 4093027 aaataaatgaaa-taaaaataggaaa---------ccagt-----agag-aaatcgacaaaaccagaagatgatt------ctttgaaaag---ttcaa--ta-aaattgaaaag---cctctag---ccaag---ttaactaagaaaTC----AGATATTCA-----ACATTATTCA-----------CACAA---ACAAAAAGTA-----CTTAAAAT--GGTATATTT---AAAATATAATTGTAGTGTACAAAAGC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11049745 188 + 30473821 atatcaataaaattttaaaaaggaca---------tcaat-----agcg-aaaatcaatgagccaaaggttgatt------ctttgcaaaa---gtcaa--ta-aaattgataaa---cgtctag---ccagg---ttacctaagaCATT----AGACATTCA-----GCATTATTCA-----------CTC-----ACAAAAAGAG-----CTTAAAGT--GGTATATTT---AGAAAAGAATTATCATGTACAAGGG- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45751069 206 - 149736546 aatttaatgtgactgaaaacatgaaa---------tcaat-----ggaataaaagaccaccaccaagagctggtt------ctttgaaata---gtctg--tg-gaatttacata---c-tctag---ccata---ttagctaacaaGTC----AAACCTT-A-----ATATTAGTCACTAACCAAAAGCAAAC---ATAAAAATAAAAGTCCCTACAAT--GTCATATTT---ACAACCCAAATGAATTGTGCAATGAT i mm10.chr6 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 574270 9350 + 2414909 M e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=632951.000000 s hg38.chrUn_KI270749v1 97683 73 + 158759 ATTGCAGTA---------TACAAATATATTG---CAGGTAAAAATCACAATA-TTTAAAATA-TTTACCAAAGCCTACTTGACTGTG s panTro5.chr3 201984910 73 - 202621043 ATTGTAGTA---------TACAAATGTATTG---CAGGTAAAAATCACAATA-TTTAAAATA-TTTACCAAAGCCTACTTGACTGTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752924 73 - 205426864 ATTGCAGTA---------TACAAATACATTA---AAGGTAAAAATCACAATA-TTTAAAATA-TTTACCAAAGCCTGATTGACTGTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569456 73 + 86207423 ATTGCAGTA---------TACAAATATATTG---CAAGTAAAAATCACAATA-TTTAAAATA-TTTACCAAAACCTACTTGACTGTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052779 73 + 204787373 ATTGCAGTA---------TACAAATATATTG---CAGGTAAAAATCACAATA-TTTAAAAGA-TTTACCAAAACCTGCTTGACTGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984625 73 - 192460366 ATTGCAGTA---------TACAAATATATTG---CAGGTAAAAATCACAATA-TTTAAAAGA-TTTACCAAAACCTGCTTGACTGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096590 73 - 17224310 ATTGCAGTA---------TACAAATATATTG---CAGGTAAAAATCACAATA-TTTAAAAGA-TTTACCAAAACCTGCTTGACTGTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408748 73 - 41321030 ATTGCAGTA---------TACAAATATATTG---CAAGTAAAAATCACAATA-TTTAAAAGA-TTTACCAAAACCTGCTTGACTGTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64480210 71 - 101219884 ATTGCAATA---------TACAAATATATTG---CAGGTAAAAATCACAATA-TTT--AAGA-TTTACCAAAACCTACTTGACTGTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 866198 73 - 924385 ATTGCAGTA---------TACAAATATATTG---CAGGTAAAAATCACAATA-TTTAAAAGA-TTTACCAAAACCTGCTTGACTGTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708489 73 - 10587913 ATTGCAGTA---------TACAAATATATTG---CAGGTAAAAATCACAATA-TTTAAAAGA-TTTACCAAAATCTACTTGACTGTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46041154 86 - 98464013 AGCCCATTGGCAGGTGGTCAAAAAGAAAATGGCAAAGGTAAAAACCACACCATTTTATTATATTTTACCAAA-TCTCGTTGCCTGTG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27713453 72 + 27742158 ATTGCAGTG---------TACAAAGATATTG---CAGGTAAAAATCACAATA-TTTAAGATA-TTTACCAAA-CCTACTTGCCTGTG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 250862 72 - 4835464 ATTGCAGTG---------TACAAAGATATCA---CAGGTAAAAATCACAATA-TTTAAAATA-TTTACCAAA-CCTACTTGCCTGTG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709492 69 + 4093027 ATTGCAGTG---------TACAAAGATGTTG---CAGGTAAAAATCACA----TTTAAAATA-TTTACCAAA-CCTACTTGCCTGTG i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 583929 73 + 2414909 ATTACAGTG---------TACAATTTTATTG---CAGGTAAAAATTACAATA-TTTAAAATA-TTTCCCGATACGTACTTGCCTGTG i proCoq1.NW_012148064v1 M 9350 C 0 s otoGar3.GL873534 11049933 56 + 30473821 --------------------------TATCA---AAGGTAAAAATGATGATA-TCTAAAATA-TCTACCAGTATGTACTCGCCTGTG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45751275 56 - 149736546 --------------------------AACAG---CTGGAGAAAATCCCAGCA-TTTAAAATA-TTCATCAGTTCATGCTTGTGTATG i mm10.chr6 C 0 I 1791 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=674852.000000 s hg38.chrUn_KI270749v1 97756 79 + 158759 TAGACACTGCCTCACTTCAGCAAG-TTTTTTAAAATAATGACTATACTAAATT-AACTGCCTGAATTCAAACCTATTCTTT s panTro5.chr3 201984983 79 - 202621043 TAGACACTGCCTCACTTCAGCAAG-TTTTTTAAAATAATGACTATACTAAATT-ATCTGCCTGAATTCAAACCTATTCTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204752997 79 - 205426864 TAGACACTGCCTCACTTCAGTAAG-TTTTTTAAAATAATGACTATACTAAATT-ATCTGCCTGAATTCAAACCAATTCTTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569529 79 + 86207423 TAGATACTGCCTCACTTCAGCAAG-TTTTTTAAAATAATGACTATACTAAAAT-ATCTGTCTGAATTCAAATCTATTCTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052852 78 + 204787373 TAGACACTGCCTCACTTCAGCAAG-TTTTTT-TTATAATGACTATACTAAATT-ATCTGCCTGAACGCAAACTTATTCTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984698 78 - 192460366 TAGACACTGCCTCACTTCAGCAAG-TTTTTT-TTATAATGACTATACTAAATT-ATCTGCCTGAACGCAAACTTATTCTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096663 78 - 17224310 TAGACACTGCCTCACTTCAGCAAG-TTTTTT-TTATAATGACTATACTAAATT-ATCTGCCTGAACGCAAACTTATTCTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408821 78 - 41321030 TAGACACTGCCTCACTTCAGCAAG-TTTTTT-TTATAATGACTATACTAAATT-ATCTGCCTGAATGCAAACTTTTTCTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64480281 75 - 101219884 TAGACACTGCCGCACTTCAGCAAG-TTTTTT----AAATGACTATACTAAATT-ATCTGCCTGAATGAGAACCTATTCTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 866271 78 - 924385 TAGACACTGCCTCACTTCAGCAAG-TTTTTT-TTATAATGACTATACTAAATT-ATCTGCCTGAATGCAAACTTATTCTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708562 78 - 10587913 TAGACACTGCCTCACTTCAGCAAG-TTTTTT-TTATAATGACTATACTAAATT-ATCTGCCTGAATGCAAACCTATTCTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46041240 75 - 98464013 TATACCCTGCCCTACTTCAGCAAG--TTCTT---ATAATGACTCTGCTACATT-CTTTGCCTGACTTCAAACCTATTCTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27713525 76 + 27742158 TATAACCTGCCTTACTTCAGCAAG-TTTTTT---ATAATGACTCTACTGTGTT-TTTTGCCTGAATTCAAACCTATTCTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 250934 77 - 4835464 TATACCCTGCCTTACTTCAGCCAGTTTTTTT---ATAATGACTCTACTACATT-CTTTGCCTGAATTCAAACCTATTCTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709561 76 + 4093027 TATACCCTGCCTTACTTCAGCAAG-TTTTTT---ATAATGACTCTACTACATT-CTTTGCCTGAATTCAAACCTATTCTTT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 584002 77 + 2414909 TACGCCCTGCctcacttcagcagg-ttcttt---ataatgactaaactaaactcctctgcctgcattcaaacctcttcctt i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11049989 77 + 30473821 TCAACCCAGCCTCACCTCAGCTAG-TTCTAT---ATAATGACTCAGTTAAACTCCTACGCCTGCCTTCAAACCTCTTCTTT i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e mm10.chr6 45751331 1791 - 149736546 I e micMur3.chr32 1602887 299 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=284313.000000 s hg38.chrUn_KI270749v1 97835 27 + 158759 TTCTTTAGATGAAATTTTTAATTCAAA s panTro5.chr3 201985062 27 - 202621043 TTCTTTAGGTGAAATTTTTAATTCAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204753076 27 - 205426864 TTCTTTAGGTGAAATTTTTAATTCAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569608 27 + 86207423 TTCTTTAGGTGAAATTTTTTATTCAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052930 27 + 204787373 TTCTTTAGGTGAAATTTTTGATTCAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984776 27 - 192460366 TTCTTTAGGTGAAATTTTTGATTCAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096741 27 - 17224310 TTCTTTAGGTGAAATTTTTGATTCAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408899 27 - 41321030 TTCTTTAGGTGAAATTTTTGATTCAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64480356 27 - 101219884 TTCTTTAGGTGAAATTTTTTATTCAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 866349 27 - 924385 TTCTTTAGGTGAAATTTTTGATTCAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708640 27 - 10587913 TCCTTTAGGTGAAATTTTTGATTCAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46041315 25 - 98464013 T--TTTAGGTTAAATTTTTGATTCAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27713601 25 + 27742158 T--TTTAGGTGAAATTTTTTATTCAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 251011 25 - 4835464 T--TTTAGGTGAAATTTTTGATTCAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709637 25 + 4093027 T--TTTAGGTGAAATTTTTGATTCAAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1603186 27 - 9149476 TTCTTTAGGTGAAATTTTGAATTCAAA i micMur3.chr32 I 299 C 0 s proCoq1.NW_012148064v1 584079 25 + 2414909 --cttTAGGCAAAATTTTGAATTCAAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11050066 25 + 30473821 --TTTCCAGTGAAATTCTGAGTTTGAA i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e mm10.chr6 45751331 1791 - 149736546 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=310134.000000 s hg38.chrUn_KI270749v1 97862 22 + 158759 TTTCTGAAATCCAATAATGTCA s panTro5.chr3 201985089 22 - 202621043 TTTCTGAAATCCAATAATGTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204753103 22 - 205426864 TTTCTGAAATCCAACAATGTCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569635 22 + 86207423 TTTCTGAAATCCAATAATGTCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052957 22 + 204787373 TTTCTGAAATCCAATAATGTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984803 22 - 192460366 TTTCTGAAATCCAATAATGTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096768 22 - 17224310 TTTCTGAAATCCAATAATGTCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408926 22 - 41321030 TTTCTGAAATCCAATAATGTCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64480383 22 - 101219884 TTTCTGAAATCCAATAATGTCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 866376 22 - 924385 TTTCTGAAATCCAATAATGTCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708667 22 - 10587913 TTTCTGAAATCCAATAATGTCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46041340 22 - 98464013 TTTCTGAAATGCAATAATGTCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27713626 22 + 27742158 TTTCTGAAATGCAATAATGTCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 251036 22 - 4835464 TTTCTGAAATGCAATAATGTCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709662 22 + 4093027 TTTCTAAAATGCTATAATGTCA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1603213 22 - 9149476 TTTCTGAAATCCAATAATGTCA i micMur3.chr32 C 0 I 145 s proCoq1.NW_012148064v1 584104 22 + 2414909 TTTCTAAAATCCAATAATGTCA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11050091 22 + 30473821 TTTCTGAAATTTGATAATGTCA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45753122 22 - 149736546 TTTCTAAACTTCAGCAATGTCA i mm10.chr6 I 1791 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=1155895.000000 s hg38.chrUn_KI270749v1 97884 119 + 158759 CCTAGGCCAATAATAGATCAATCATGGTGCCTGTCAGGTTCTTTCTGAGCCCTGTTAGCAGCTCATTTAAGTGTC-----------ATCCATTAATACACACTGCCTTGACACCTCCACTGTATTTTTTG s panTro5.chr3 201985111 119 - 202621043 CCTAGGCCAATAATAGATCAATCATGGTGCCTGTCAGGTTCTTTCTGAGCCCTGTTAGCAGCTCATTTAAGTGTC-----------ATCCACTAATACACACTGCCTTGACACCTCCAATGTATTTTTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204753125 119 - 205426864 CCTAGGCCAATAATAGATCAATCATGGTGCCTGTCAGGTTCTTTCGGAGCCCTGTTAGCAGCTCATTTAAGTGTC-----------ATCCATTAATACACACTGCCTTGACACCTCCAATGTATTTTTTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569657 119 + 86207423 CCTAGGCCAATAATAGATCAATCATGGTGCCTGTCAGGTTCTTTCTGAGCCCTGTTAGCAGCTCATTTAGGTGTC-----------ATCCATTAATACACAGTGCCTTGACACCTCCAATGTATTTTTTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66052979 118 + 204787373 CCTAGGCCAATAATAGATCAATCATGGTGCCTGTCAGGTTCTTTCTAAGCCCCGTTAGC-GCTCTTTTAGGTGTC-----------ATCCATTAATAGACACTGCCTTGACACCTCCAATGTATTTTTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984825 118 - 192460366 CCTAGGCCAATAATAGATCAATCATGGTGCCTGTCAGGTTCTTTCTAAGCCCTGTTAGC-GCTCTTTTAGGTGTC-----------ATCCATTAATAGACACTGCCTTGACACCTCCAATGTATTTTTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096790 118 - 17224310 CCTAGGCCAATAATAGATCAATCATGGTGCCTGTCAGGTTCTTTCTAAGCCCTGTCAGT-GCTCTTTTAGGTGTC-----------ATCCATTAATAGACACTGCCTTGACACCTCCAATGTATTTTTTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17408948 118 - 41321030 CGTAGGCCAATAATAGATCAATCATGGTGCCTGTCAGGTTCTTTCTGAGCCCTGTTAGC-GCTCTTTTAGGTGTC-----------ATCCATTAATAGACACTGCCTTGACACCTCCAATGTATTTTTTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64480405 119 - 101219884 CCTAGGCCAATAATAGATCAATCATGGTGCCTGTCAGGTTCTTTCTGAGCCCTGTTAGCAGCTCTTTTAGGTGTC-----------ATCCATTAATAGACACTGCCTTGACACCTCCAATATATTTTTTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 866398 118 - 924385 CCTAGGCCAATAATAGATCAATCATGGTGCCTGTCAGGTTCTTTCTGAGCCCTGTTAGC-GCTCTTTTAGGTGTC-----------ATCCATTAATAGACACTGCCTTGACACCTCCAATGTATTTTTTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708689 118 - 10587913 CCTAGGCCAATAATAGATCAATCATGATGCCTGTCAGGTTCTTTCTGAGCCCTGTTAGC-GCTCTTTTAGGTGTC-----------ATCCATTAGTAGACATTGCCTTGACACCTCCAATGTATTTTTTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46041362 119 - 98464013 CCTAGGCCAATAATAGATCAATTATGGTGCCTGTGAGGTTCTTTCTAAGCCCTGTTAGCCGCTCATTTAGGTGTC-----------TTCCATTAATACACACTGCCTTGACACCTCTAAGGTATTTTTTG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27713648 119 + 27742158 ACTAGGCCAATAATAGATCGATTATGGTGCCTGCAGGGTTCTTTCTAAGCCTTGTTAGCCACTCATTTAGGTGTC-----------TTCCATTAATACACACAGCCTTGACACCTCTAAGGTATTTTTTG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 251058 119 - 4835464 CCTAGGCCAATAATAGATCAATTATGCTGCCTGTGGGGTTCTTTCTAAGCCCTGTTAGCCACTCATTTAGGTGTC-----------TTCCATTAATGCACACTGCCTTGACACCTCTAAGGTATTTTATG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709684 119 + 4093027 CCTAGGCCAATAATAGATCAATTATGGTGCCTGTGGGGTTCTTTCTAAGCCCCGTTAGCCGCTTATTTAGGTGTG-----------TTCTATTAATACACACTGCCTTGACACCTCTAAGGTATTTTTTG i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 584126 120 + 2414909 ----------TCATAGATCAATTGTGGTGTCTGCTGTGTTCTCTCTGTGCCCTGTTAACAGCTCATATATGTGTCATTCATCAGTAATCCATCAATACACACTGCCTTGACTTCTTCAATGAATTTTTTG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11050113 116 + 30473821 ----------TCTCAGTTCAGTCGTGGTGCCTCCTGGGT----TCTGTGCCCTGTTAACACGTCTTTTATGTGTCTTTCATCAGTAATCCATAAATATGCACAGTCCTGACTCCTTCCATAAAGTTTTGG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45753144 104 - 149736546 ----------CCACAGATGAAAACTGA-ACCTGTT--GTTCTTCCTGAAGCTTCATAGTATCCCGTTTACATATT-----------ATTCATGACTATGC--CATCTTGATCTCCTCCACCTGTATTTTG i mm10.chr6 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e micMur3.chr32 1603235 145 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e canFam3.chr20 16585240 4188 + 58134056 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=136878.000000 s hg38.chrUn_KI270749v1 98003 15 + 158759 TTAGA---TTAGTTTTCC s panTro5.chr3 201985230 15 - 202621043 TTAGA---TTAGTTTTCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204753244 15 - 205426864 TTAGA---TTAGTTTTCC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569776 15 + 86207423 TTAGA---TTAGTTTTCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66053097 15 + 204787373 TCAGA---TTAGTTTTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984943 15 - 192460366 TCAGA---TTAGTTTTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096908 15 - 17224310 TCAGA---TTAGTTTTCC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17409066 15 - 41321030 TCAGA---TTAGTTTTCC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64480524 15 - 101219884 TTAGA---CTAGTTTTCC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 866516 15 - 924385 TTAGA---TTAGTTTTCC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708807 15 - 10587913 TTAGA---TTAGTTTTCC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46041481 15 - 98464013 TTAGA---TTAGTTTTCC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27713767 15 + 27742158 TTAGA---TTAGTTTTCC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 251177 15 - 4835464 TTAGA---TTAGTTTTCC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709803 15 + 4093027 TTAGA---TTAGTTTTCT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 584246 14 + 2414909 TTAG----TTAATTGTCA i proCoq1.NW_012148064v1 C 0 I 4 s otoGar3.GL873534 11050229 14 + 30473821 TTAG----CTAATTGGCT i otoGar3.GL873534 C 0 I 4 s mm10.chr6 45753248 17 - 149736546 CTAAA-AGTTAACTATTA i mm10.chr6 C 0 C 0 s canFam3.chr20 16589428 15 + 58134056 tTAGATAATTGGCTT--- i canFam3.chr20 I 4188 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e micMur3.chr32 1603235 145 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=1237443.000000 s hg38.chrUn_KI270749v1 98018 92 + 158759 CATGCATTGGGTCCATTATCAATCCTTAATAATGAGAA--AAACATGAAATTTAAAATTTAAAATTATCTTTCAAATATTGG--AAGAGGAAAGGA s panTro5.chr3 201985245 92 - 202621043 CATGCATTGGGTCCATTATCAATCCTTAATAATGAGAA--AAACATGAAATTTAAAATTTAAAATTATCTTTCAAACATTGG--AAGAGGAAAGGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204753259 92 - 205426864 CATGCATTGGGTCCATTATCAATCCTTAATAATGAGAA--AAACATGAAATTTAAAATTTAAAATTATCTTTCAAACACTGG--AAGAGGAAAGGA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569791 92 + 86207423 CATGCGTTGGGTCCATTATTAATCCTTAATAACGAGAA--AAACATGAAATTTAAAATTTAAATCTATCTTTCAAACATTGG--AAGAGGAAAGGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66053112 87 + 204787373 CATGCATTGGGTCCATTATCAATCCttaataatgagaa--aaacattaaatttaaaatttaaattTATCTTTTAAACATTGG--A-----AAAGGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60984958 87 - 192460366 CATGCATTGGGTCCATTATCAATCCTTAATAATGAGAa--aaacattaaatttaaaatttaaatttatcttttaaacattGG--A-----AAAGGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11096923 87 - 17224310 CATGCATTGGGTCCATTATCAATCCTTAATAATGAGAa--aaacatgaaatttaaaatttaaatttatcttttaaacattGG--A-----AAAGGA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17409081 87 - 41321030 CATGCATTGGGTCCATTATCAATCCTTAATAATGAGAa--aaacataaaatttaaaatttaaatttatcttttaaacattGG--A-----AAAGGA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64480539 92 - 101219884 CATGCATTGGGTCCATTATCAATCCTTAATAATGAGAA--AAACATGAAATTTAAAATTTAAACGTATCTTTCAAACATTGG--AAGAGGAAAGGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 866531 87 - 924385 CATGCATTGGGTCCATTATCAATCCTTAATAATGAGAA--AAACATGAAATTTAAAATTTAAATTTATCTTTCAAACATTGG--A-----AAAGGA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708822 92 - 10587913 CATGCATTGGGTCCATTATCAATCCTTAATAATGAGAA--AAACATGAAATTTAAAATTTAAATTTATCTTTCAAACATTGG--AAGAGGAAAGGA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46041496 92 - 98464013 CATGCATTGTGTCCATTATCAATTCTTAACAATGAGAA--AAACGTGaaatataaaatttaaatttatCTTTCAAACTTTGG--AAGAGGAAAGGA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27713782 92 + 27742158 CATGCATTGTGTCTGTTATCAATCCTTAACAATGAGAA--AAACATGaaatttaaaatttaaatttatCTTTCAAACTTTGG--AAGAGGAAAGGA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 251192 92 - 4835464 CATGCATTGTGTCCATTATCAATCCCTAACAATGAGAa--aaacatgaaatttaaaatttaaatttatctttcaaactttGG--AAGAGGAAAGGA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709818 91 + 4093027 CATGCATTGTGTCCATTATCAATCCTTAACAATGAGAa--aaacatgaaatttaaaatttaaatttatctttcaaactttGG--AAGAGGAAA-GA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1603380 92 - 9149476 CATGCATTATGTCCATTATCAATCCTTAATAATGAGGA--AAACATGGGATTTAGAATTTAAATTTATCTTTCAAACATTGG--AAAGGAAAAGGA i micMur3.chr32 I 145 C 0 s proCoq1.NW_012148064v1 584264 92 + 2414909 CATGCATTATGTCCATTGTCAATCCATAATAATGAGGA--AAACATGGGGTTTAGAATTTAAATTTATCTTTCAAATGTTGG--AAAAGAAAAGAA i proCoq1.NW_012148064v1 I 4 C 0 s otoGar3.GL873534 11050247 94 + 30473821 CATGTATTATGTCCACTATCAATCTTTAATAATGAGAA--AAACATGGGATTTAAAATTTAAATGTATCTTTCAAACACTGGAAAAAGAAAAAGGA i otoGar3.GL873534 I 4 C 0 s mm10.chr6 45753265 94 - 149736546 TATGCATCTGACCAAATACTAATCCTGAATAATGAGAAACAGACACCAAATTTAAATTTTAAATTGATCTTTCATTCATTGG--TAGAATAAAGGG i mm10.chr6 C 0 C 0 s canFam3.chr20 16589443 92 + 58134056 CACGTGTTGTGTACAATATCAATCCTTAATAATGAGTA--ACACATGGAATGTAAATTTTACATTTATCTTCTATACATTGG--AAGGGAAAAGGA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e dasNov3.JH563077 1772005 9386 - 2187301 I a score=1272418.000000 s hg38.chrUn_KI270749v1 98110 97 + 158759 TGGTTTTAATTCCCCAGGTCGTTAAATGAGTAATGAAGCAAGTTTTACATTCTAACCG-TGAGACAT----ATTAGCTGTTAATTTGAAAAGGAAACATTTA s panTro5.chr3 201985337 97 - 202621043 TGGTTTTAATTCCCCAGGTCGTTAAATGAGTAATGAAGCAAGTTTTACATTTTAACCG-TGAGACAT----ATTAGCTGTTCATTTGAAAAGGAAACATTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204753351 97 - 205426864 TGGTTTTAATTCCCCAGGTCGTTAAATGAGTAATGAAGCAAGTTTTACATTCTAACCG-TGAGACAT----ATTAGCTGTTCATTTGAAAAGGAAACATTTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569883 97 + 86207423 TGGTTTTAATTCCCCAGGTCGTTAAATGAGTAATGAAGCAAGTTTTACATTCTAATCC-TGAGACAT----ATTAGCTGTTCATTTGAAAAGGAAACATTTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66053199 88 + 204787373 TGG-TTTAATTCCCTAGGTCGTTAAATG--------ACCAGGTTTTACATTCTAACAG-TGAGATAT----ATTAGCTGTTCATTTGAAAAGGAAACATTTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985045 88 - 192460366 TGG-TTTAATTCCCTAGGTCGTTAAATG--------ACCAGGTTTTACATTCTAACAG-TGAGATAT----ATTAGCTGTTCATTTGAAAAGGAAACATTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097010 89 - 17224310 TGG-TTTAATTCCCTAGGTCGTTAAATG--------ACCAGGTTTTACATTCTAACAGTTGAGATAT----ATTAGCTGTTCATTTGAAAAGGAAACATTTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17409168 88 - 41321030 TGG-TTTAATTCCCTAGGTCGTTAAATG--------ACCAGGTTTTACATTCTAACAG-TGAGATAT----ATTAGCTGTTCATTTGAAAAGGAAACATTTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64480631 88 - 101219884 TGG-TTTAATTCCCTAGGTCGTTAAATG--------ACCAGGTTTTACATTCTAACAG-TGAGATAT----ATTAGCTGTTCATTTGAAAATGAAACATTTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 866618 88 - 924385 TGG-TTAAATTCCCTAGGTCGTTAAATG--------ACCAGGTTTTACATTCTAACAG-TGAGATAT----ATTAGCTGTTCATTTGAAAAGGAAACAGTTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6708914 89 - 10587913 TGGTTTTAATTCCCCAAGTCGTTAAATG--------ACCAGGTTTTACATTCTAACAG-TGAGACAT----ATTAACTGTTCATTTGAAAAGGAAACATTCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46041588 97 - 98464013 TGGTTTTAATTCCCCAGGTCGTTAAATGAGTAATAAAGCAGGTTTTACATTCTAACTG-TGAGGCAT----ATTAGCTGTTCATTTGAAAAGGAAACACTTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27713874 97 + 27742158 TGGTTTTAATTCCCCTGGTCATTAAATGAGTAATGAAGCAGGTTTTACATTCTAACTG-TGAGGCAT----ATTAGCTGTTCATTTGAAAAGGAACTATTTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 251284 96 - 4835464 TGGTTTTAATTTCCCAGGTCGTTAAATGAGTAATGAAGCAGGTTTTACATTCTAACTG-TGAGGCAT----ATTAGCTGTTCATTTG-AAAGGAAACATTTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3709909 97 + 4093027 TGGTTTTAATTCCCCAGGTCGTTAAATGAGTAATGAAGCAGGTTTTACATTCTAACTG-TGAGGCAT----ATTAGCTGTTCATTTGAAAAGGAAACATTTA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1603472 97 - 9149476 TGGTTTTAATTCCCTGGGTTGTTAAATGAGTAATGAAGCAGGTTTTGCATTCTAACGG-TGAGGCAT----ATTAGTCGTTCATTTGAAATGGAAACATTTA i micMur3.chr32 C 0 I 507 s proCoq1.NW_012148064v1 584356 97 + 2414909 TGGGTTTAATTCCCCAGGTTGTGTAATGAGTAATGAAGCAGGTTTTGCATCCTAATCG-TGAGGCGT----ATTAATTGTTCATTTGAAAGGGAAACATTTA i proCoq1.NW_012148064v1 C 0 I 493 s otoGar3.GL873534 11050341 97 + 30473821 TGGTTTCAATTCCCCAGGTTATTAAATGAGTAATGAGGCAGGTTTTGCATTCTGACTG-TGAGGCCT----ATTAGTTGTTCATTTGAAAGGGAAACACTTC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45753359 97 - 149736546 TGGTTTTAATCCCCCAAGTCATTAAACAAGTAATAAGGAAGGTTTTAGAGTCTAACCA-TGAGATAT----ATTAGCTGCTTGTTTGAAAGAGAAACAGTTA i mm10.chr6 C 0 C 0 s canFam3.chr20 16589535 97 + 58134056 TTATTTTAATTCCTAAAGTCTCTTCTTA----ATGAAGCAAGTTTTACATTCTAACCA-TGAGGAATATTAATTAGCTGTTCATTTGAAAAGAGAACACTTA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1781391 101 - 2187301 tgctttcagcagcctagcaaactaaaacaGTAATGTAGCAGGTTTTACATTCTAAGTA-GGAGGCATATTAATTAGCTGTTCATTTGAAAAGAGAATTTTTA i dasNov3.JH563077 I 9386 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=3205534.000000 s hg38.chrUn_KI270749v1 98207 313 + 158759 GTTTC-----CAGTCTTTGGGGACCTCACTGCAAAC------TTTTATTTAC-AAAGCTAGTTG-CACGTGTCTATTATTGTGCATCGTTTTT-GAGCTTTTGCATTATATTT-----TGCATCACCA--CAGTTA-AGGG-----------TAAAATAACAGGACTATGGCATCTGTGTTTAGATTT-AGATAGACAAATGGGGAAATAGTGCAGAGAAAAGCCAACTAAAGAAATTT-TAATTGTTCCTTGTATA------AAG-CCCCAGTTTACAGAAAGGTTGAACCAATTCATTTCTGCAGCTTACATATCTAAATCTGTGACCA--TGTAGCATATGAAACAAATAGGGT s panTro5.chr3 201985434 313 - 202621043 GTTTC-----CAGTCTTTGGGGACCTCACTGCAAAC------TTTTATTTAC-AAAGTTAGTTG-CACATGTCTATTATTGTGCATTGTTTTT-GAGCTTTTGCATTATATTT-----TGCATCACCA--CAGTTA-AGGG-----------TAAAATAACAGGACTATGGCATCTGTGTTTAGATTT-AGATAGACAAATGGGGAAATAGTGCAGAGAAAAGCCAACTAAAGAAATTT-TAATTGTTCCTTGTATA------AAT-CCCCAGTTTACAGAAAGGTTGAACCAATTCATTTCTGCAGGTTACATATCTAAATTTGTGACCA--TGTAGCATATGAAACAAATAGGGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204753448 313 - 205426864 GTTTC-----CAGTCTTTGGGGACCTCACTGCAAAC------TTTTATTTAC-AAAGCTAGTTG-CACGTGTCTATTATTGTGCATCGTTTTT-GAGCTTTTGCATTATATTT-----TGCATCACCA--CAGTTA-AGGG-----------TAAAATAACAGGACTATGGCATCTGTGTTTAGATTT-AGATAGACAAATGGGGAAATAGTGCAGAGAAAAGCCAACTAAAGAAATTT-TAATTGTTCCTTGTATA------AAG-CCCCAGTTTACAGAAAGGTTGAACCAATTCATTTCTGCAGCTTACATATCTAAATTTGTGACCA--TGTAGCATATGAAACAAATAGGGT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67569980 313 + 86207423 GTTTC-----CAATCTTTGGGGACCTCATTGCAAAC------TTTTATTTAC-AAAGCTAGTTG-TACATGTCTATTATTGTGCATCATTTTT-GAGCTTTTGCATTATATTT-----CACATCACCA--CAGTTA-AGGG-----------TAAAATAATAGGACTATGGCATCTGTGTTTCCATTT-AGATAAACAAATGGGGAAATAGTGCAGAGAAAAGCCAACTAAAGAAATTT-TAATTGTTCCTTGTATA------AAG-CCCCAGTTTACAGAAAGGTTGAACCAATTCATTTCTGCAGCTTACATATCTAAATTTGTGACCA--TGTAGCATATGAAACAAATATGGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66053287 314 + 204787373 GTTTC-----CAGTCTTTAGGGACCTCATTGCAAAC------TTTTATTTAC-AAAGCCAGTTG-TACATGTCCATTATTGTGTATCATTTTT-GAACTTTTGCATTATATTT-----CGTATCACCA--CAGTTA-AGGG-----------TAAAATAACAAGACTATGGCATCTGTGTTTTGATTT-AGATAAACAAATAGGGAAATAGTGCAGAGAAAAGCCAACTAAAGAAATTT-TAATTGTT-CTTGTATA------AAG-CCCCAGTTTACAAACAGGTTGAACCAATTCATTTCTGCAGCTTACATATCTAAATTTGTGACCACCTGTAACATATGAAACAAATATGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985133 314 - 192460366 GTTTC-----CAGTCTTTAGGGACCTCATTGCAAAC------TTTTATTTAC-AAAGCCAGTTG-TACATGTCCATTATTGTGTATCATTTTT-GAACTTTTGCATTATATTT-----CGTATCACCA--CAGTTA-AGGG-----------TAAAATAACAAGACTATGGCATCTGTGTTTTGATTT-AGATAAACAAATAGGGAAATAGTGCAGAGAAAAGCCAACTAAAGAAATTT-TAATTGTT-CTTGTATA------AAG-CCCCAGTTTACAAACAGGTTGAACCAATTCATTTCTGCAGCTTACATATCTAAATTTGTGACCACCTGTAACATATGAAACAAATATGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097099 314 - 17224310 GTTTC-----CAGTCTTTAGGGACCTCAATGCAAAC------TTTTATTTAC-AAAGCCAGTTG-TACATGTCCATTATTGTGTATCATTTTT-GAACTTTTGCATTATATTT-----CGTATAACCA--CAGTTA-AGGG-----------TAAAATAACAAGACTATGGCATCTGTGTTTTGATTT-AGATAAACAAATGGGGAAATAGTGCAGAGAAAAGCCAACTAAAGAAATTT-TAATTGTT-CTTGTATA------AAG-CCCCAGTTTACAAACAGGTTGAACCAATTCATTTCTGCAGCTTACATATCTAAATTTGTGACCACCTGTAACATATGAAACAAATATGAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17409256 314 - 41321030 GTTTC-----CAGTCTTTAGGGACCTCATTGCAAAC------TTTTATTTAC-AAAGCCAGTTG-TACATGTCCATTATTGTGTATCATTTTT-GAACTTTTGCATTATATTT-----CGTATCACCA--CAGTTA-AGGG-----------TAAAATGACAAGACTATGGCATCTGTGTTTTGATTT-AGATAAACAAATGGGGAAATAGTGCAGAGAAAAGCCAACCAAAGAAATTT-TAATTGTT-CTTGTATA------AAG-CCCCAGTTTACAAACAGGTTGAACCAATTCATTTCTGCAGCTTACATATCTAAATTTGTGACCACCTGTAACATATGAAACAAATATGGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64480719 314 - 101219884 GTTTC-----CAGTCTTTAGGGACCTCATTGCAAAC------TTTTATTCAC-AAAGCCAGTTG-TACATGTCCATTATTGTGTATCATTTTT-GAACTTTTGCATTATATTT-----CGTATCACCA--CAGTTA-AGGG-----------TAAAATAACAAGACTATGGCATCTGTGTTTTGATTT-AGATAAACAAATGGGGAAATAGTGCAGAGAAAAGCCAACTAAAGAAATTG-TAATTGTT-CTTGTATA------AAG-CTCCAGTTTACAAACAGGTTGAACCAATTCATTTCTGCAGCTTACATATCTAAATTTGTGACCACATGTAACATATGAAACAAATATGGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 866706 314 - 924385 GTTTC-----CAGTCTTTAGGGACCTCATTGCAAAC------TTTTATTTAC-AAAGCCAGTTG-TACATGTCCATTATTGTGTATCATTTTT-GAACTTTTGCATTATATTT-----CGTATCACCA--CAGTTA-AGGG-----------TAAAATAACAAGACTATGGCATCTGTGTTTTTATTT-AGATAAACAAATGGGGAAATAGTGCACAGAAAAGCCAATTAAAGAAATTT-TAATTGTT-CTTGTATA------AAG-CCCCAGTTTACAAACAGGTTGAACCAATTCATTTCTGCAGCTTACATATCTAAATTTGTGACCACCTGTAACATATGAAACAAATATGGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709003 315 - 10587913 GTTTC-----CAGTCTTTGGGGACCTCATTGCAAAC------TTTTATTTAC-AAAGCCAGTTG-TACAGGTCCATTATTGTGCATTATTTTT-GAACTTTTGCATTATATTT-----CGTATCACCA--CAGTTA-AGAG-----------TAAAATAACAAGACTATGGCATCTGTGTTTTGATTT-AGATAAACAAATGGAGAAATAGTGCAGAGAAAAGCCAACTAAAGAAATTT-TAATTGTT-CTTGTACA------AAGCCCCCAGTTTACAAACAGGTTGAACCAATTCATTTCTGCAGCTTACATATCTAAATTTGTGGCCACATGTAACATATGAAACAAATATGGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46041685 320 - 98464013 GTGTCAAACACAATCTTTGGGGACCTCATTGCAAAC------TTTGATTTAC-AAAGCCAGTTG-TACGTGTCTCTTATTGTGCATGGTTTTT-GATCTTTGGCATTATATTT-----CACATCACCA--CAGTTA-AGGG-----------CAAAATAATAGGACCATGGCATCTGTGTTTTGATTT-AGATAAACAAATGGGAAAATACAGCAGAGAAAAGCCAACTAAAGGAAATT-TAATTGTGCCTTGTATA------AAG-CCCCACTTTACAGAAAGGTTGAATCAATTCATTTCTGAAGCTTACTTGTCTAAATTTGTGACCACATGTAACATATGAAACAAATATGGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27713971 320 + 27742158 GTGGCAAACACAATCTTTGGGGACCTCATTGCAAAC------TTTTATTTAC-AAAGCCAGTTG-TATGTGTCTCTTATTGTGCACGGCTTTT-GATCTTTGGCATTATATTT-----CACATCACCA--CAGTTA-AGGG-----------TAAAATAATAGGACCGTGGCATCTGTGTTTTGATTT-AGATAAACAAATGGGAAAATACAGCAGAGAAAAGTCAACTATAGGAAGTT-TAATTGTGCCTTGTATA------AAG-CTCCACTTTACAGAAAGGTTGAATCAATTCATTTCTGCAGCTTACATGTCTAAATTTGTGACCATATGTAATGTATGAAACAAATATGAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 251380 320 - 4835464 GTGGCAAACACAATCTTTGGGGACCTCATTGCAAAC------TTTTATTTAC-AAAGCCAGTTG-CATGTGTCTCTTATTGTGAATGGTTTTT-GATCTTTGGCATTACATTT-----CACATCACCA--CAGTTA-AGAG-----------TAAAATAATAGGACCGTGGCATCTGTGCTTTGATTT-AGATAAACAAACGGGGAAATACAGCAGAGAAAAGCCAACTAAAGGAAGTT-TAATTGTGCCTTGTATA------AAG-CTCCGCTTTACAGAAAGGTTGAATCAATTCATTTCTGCAGCTTACATATCTAAATTTGTGACCACATGTAACGTATGAAACAAATACGGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3710006 320 + 4093027 GTGGCAAACACAATCTTTGGGAACCTCATTGCAAAC------TTTTATTTAC-AAAGCCAGTTG-TATGTGTCTCTTATTGTGCATGGTTTTT-TATCTTTGGCATTATATTT-----CACATCACCA--CAGTTA-AGGG-----------TAAAAAAATAGGACCGTGGCATCTGTGTTTTGATTT-AGATAAGCAAATGGGGAAATACAGCAGAGAAAAGCCAACTAAAGGAAGTT-TAATTGTGCCTTGTATA------AAG-CCCCACTTTACAAAAAGGTTGAATCAATTCATTTCTGCAGCTTACATTTCTAAATTTGTGACCACATGTAATGTATGAAACAAATATGGT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11050438 329 + 30473821 ATGGCACGTACAGTCTTTGGGGAGCTCATTTCAAAC------TTTTATTTACAAAAACTCGTTA-TATGGCTCCATTGTTGAGCATCATTTTTCGAGTTTTCACATTTTATTT-----AACTCCAGCA--CAGTGG-GGGGGGGCGGGGAGTGAGAATAATAGGAACGCGATCTCTGTCTTTTGATTA-AAATAGAC--ATGGAGAAACACGCTTGGGAAGACCCAGC--AAAGAAGTT-TAACTGTGCTTCCTCTA------AAC-CCCCATTTTATAGGATGGTTAGGCAGATGCCTTCCTGCAGCTTATATATTCCAAACTGCAACCACATGTAGCATATAGAACAAATACGGC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45753456 302 - 149736546 ------ATGACAGATTT----AATCACTTTTTTAACTTTTATTTTTATTTTC-AAACCC----------TGTATATTATCATAAGttattttt-a---tttaacattatatttaattGTATGTTCCCAACAAGCTA-AAGG--------AATTAAGATAACAAGATTTTGATATCAGAATTTTAATTTGAAATAAACACATGAGGAAAT---GAAGAGAAAAATCAGCAAAGTGAATTTGTAACTGCTTCTCCTGAA------GGT------------GAATGTGTTTGACTACATTCTTATTGTAGCTTGCATAATAGAATCTATAAACACATGTAACAAAATATACAAAGGAGAC i mm10.chr6 C 0 I 549 s canFam3.chr20 16589632 305 + 58134056 ATAGCAACTACAATCCTTGGGGAGC--------ATC------TTT--------CAAGTCAGTTGTTAAGTGTGTATTACTGCGCATTATTTTTTCAGATTTTACATTATATTT-----AACACCAACA--TCATTA-AGGG----------GTAATATAACAAGACTGTGACAACC-CGTGTTGATTA-AAACAAACACATGAGGAAATATAGTAGAGAAAAACAGGCAAAGTGAAGTT-T-ATTGTTCCTCTTATA------AAG--ACCACTTTATAGGATGGTCAGATTATTTTCTATCTGCAGTTTATATAGTGAAATATGTGACCACATGTAGCATGTGAAATAAATATGGT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1781492 316 - 2187301 ATTGCAAATACAA---------ACCTCGTTTTACCC------TTTTACTTAC-AAAACCAGTTG-TGTATGTATATTATTGTGTATTATCTTTCGAGATTTTACATTATGTAT-----AGCATCAGCA--CAATTACAGGG-----------TGAAATAACAGGACTGTGCCATCTGTGTTTTGATTC-AAATAAGCACATGGGGAAGGAG---AAAAAAAAATCAGTCAAGTGAAGCA-TAATTGTGCCTCTTGTACTTCTGAAA-ATCCAAGTTATAAGATGGTTGGACTAATTCCTTTCTGAAGCCTATCTATTTAAATTTGTGATGGCATGTACCATGTGAAACAAAAAAGGC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 584453 493 + 2414909 I e micMur3.chr32 1603569 507 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=1628213.000000 s hg38.chrUn_KI270749v1 98520 164 + 158759 ATCCCTATTAATCA-CTGAGTTGTCAATATGAACA-T-AAAGATTGGTGTGAATTCAGTGTCCTGCACAAAAGTCTTCAGTTAAAACAGAAGAGATATTATGGTGATGGATTCCCCAGGATGTTCAACAAACAGAGAAGAGGCCAAAGCACGTTGTCTCAATCTTTC s panTro5.chr3 201985747 164 - 202621043 ATCCCTATTAATCA-CTGAGTTGTCAATATGAACA-T-AAAGATTGGTGCGAATTCAGTGTCCTGCACAAAAGTCTTCAGTTGAAACAGAAGAGATATTATGGTGGTGGATTCCCCAGGATGTTCAACAAACAGAGAAGAGGCCAAAGCATGTTGTCTCAATCTTTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204753761 164 - 205426864 ATCCCTATTAATCA-CTGAGTTGTCAATATGAACA-T-AAAGATTGGTGCGAATTCAGTGTCCTGCACAAAAGTCTTCAGTTAAAACAGAAGAGATATTATGGTGGTGGATTCTCCAGGATGTTCAACAAACAGAGAAGAGGCCAAAGCATGTTGTCTCAATCTTTC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570293 164 + 86207423 ATCCCTATTAATCA-CTGAGTTGTCAATATGAATA-T-AAAGATTGGTGCGAATTCAGTGTCCTGCACTAAAGTCTTCAGTTAAAACAGAAGAGATATTACGGTGGTGGATTCCCCAGGATGTTCAACAAACAGAGAAGAGGCCAAAGCATCTTGTCTCAATCTTTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66053601 165 + 204787373 ATCCCTATTAATCATCTGAGTTGTAAATATGAACT-T-AAGGATTGGTGCAAATTCAGTGTCCTGCACAAAAGTCTTCATTTAAAACAGAAGAGAGATTATGGTGGTGAATTCCCCAGGATGTTCAACAAACAGAGAAGAGGCCAAAGCATCTTGTCTCAGTCTTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985447 165 - 192460366 ATCCCTATTAATCATCTGAGTTGTAAATATGAACT-T-AAGGATTGGTGCAAATTCAGTGTCCTGCACAAAAGTCTTCATTTAAAACAGAAGAGAGATTATGGTGGTGAATTCCCCAGGATGTTCAACAAACAGAGAAGAGGCCAAAGCATCTTGTCTCAGTCTTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097413 165 - 17224310 ATCCCTATTAATCATCTGAGTTGTAAATATGAACT-T-AAGGATTGGTGCAAATTCAGTGTCCTGCACAAAAGTCTTCATTTAAAACAGAAGAGAGATTATGGTGGTGAATTCCCCAGGATGTTCAACAAACAGAGAAGAGGCCAAAGCATCTTGTCTCAGTCTTTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17409570 165 - 41321030 GTCCCTATTAATCATCTGAGTTGCAAATATGAACT-T-AAGGATTGGTACAAATTCAGTGTCCTGCACAAAAGTCTTCATTTAAAACAGAAGAGAGATTATGGTGGTGAATTCCCCAGGATGTTCAACAAACAGAGAAGAGGCCAAAGCATCTTGTCTCAGTCTTTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481033 165 - 101219884 ATCCCTATTAATCATCTGAGTTGTAAATATGAACT-T-AAGGATTGGTGCAAATTCAGTGTCCTGCACAAAAGTCTTCATTTAAAACAGAGGAGAGATTATGGTGGTGAATTTCCCAGGATGTTCAACAAACAGAGAAGAGGCCAAAGTATCTTGTCTCAGTCTTTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867020 165 - 924385 ATCCCTATTAATCATCTGAGTTGTAAATATGAACT-T-AAGGATTGGTGCAAATTCAGTGTCCTGCACAAAAGTCTTCATTTAAAACAGAAGAGAGATTATGGTGGTGAATTCCCCAGGATGTTCAACAAACAGAGAAGAGGCCAAAGCATCTTGTCTCAGTCTTTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709318 154 - 10587913 ATCCCTGTTAATCATCTGAGTTGTAAATATGAACT-T-CAGGATTGGTGCAAATTCAGTGTCCTGCACAAAAGTCTTCATTTAAAACAGAAGAGAGATTATGGTGGTGAATTCCCCAGGATGTTCAACAAACAG-----------AAGCATCTTGTCTCAGTCTTTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042005 162 - 98464013 ATCCCTATTAATCATCTGGGCTGTCAATATGAACA-T-AAAGATTGGTGTGAATTCAGTGTTCTGCACAAAAGTCTCCATTTAAAACAGAAGAGATACTATGGTGTTAGATTTCCTCTGATGGTCAACAAACAG--AAGAGACCAAAGCATCTTGCCTC-ATCATCC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27714291 163 + 27742158 ATCCCTATTAATCATCTGGGCTGTCAATATGAACA-T-AAAGATTGGTGTGAATTCAGTGTTCTGCACAAAAGTCTCCATTTAAAACAGAAGAGATACTATGTTGGTAGATTTCCTATGATGTTCAACAAACAG--AAGAAGCCAAAGCATCTTGTCTCAATCAATC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 251700 162 - 4835464 ATCCCTATTAATCATCTGGGCTGTCAATATGAACA---AAAGACTGGTGTGAATTCAGTGTTCTGCCCAAAAGTTGCCATTTAAAACAGAAGAGATACTATGGTGGTAGATTTCCTATGATGTTCAACAAACAG--AAGAAGCCAAAGCATCTTGTTTCAATCATTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3710326 163 + 4093027 ATCCCTATTAATCATCTGGGCTGTCAATATGAACA-T-AAAGATTGGTGTGAATTCAATGTTCTTCACAAGAGTCTCCATTTAAAACAGAAGAGATACTATGGTGGTAGATTTCCTATGATGTTCAACAAACAG--AAGAGGCCAAAGCATCTTGTCTCAATCATTC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11050767 161 + 30473821 ACTACTATTAATCATTTGAGCTGTCAACATGAACA-GAAAGGATTGATGTGGATTCGGGGTCCAGCACAAAACTCTCCACTTCAAATAGACGAGAGACTGTGGTGGTGGATGACTGCTGAC-----CCCGACAGAGGAGAGACCAAAGCACCTTGTTCCGATCTTTC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16589937 164 + 58134056 ATCCCTAATGATCATCCAAGTTGTCAGAACGAACAGT-AAAAGTTGATATAGCCTCAGTGTCCTCCAGAAAAGTCCGTACTTAACACAGAATAGATATTATGGTAGTGGAAGCCCCC-AACACTCAACCAACAGAGGACAGCCCAAAATATCCTTTCCTAACCTTC- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1781808 166 - 2187301 ATATCTGATGATCATTTGAGTTGTCAATATGAACAGT-ACAGATTGGTGCAGCTTCAGTATCCTGCAAAAGAGTTCCTGCTTAAAAGAAAGGGGACACTATAGTGTTGGATATCCTCTGACACTCAGCAAACAAAAGACACACCAAAGCATAGTGATCAAAACTTTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 584453 493 + 2414909 I e mm10.chr6 45753758 549 - 149736546 I e micMur3.chr32 1603569 507 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=28529.000000 s hg38.chrUn_KI270749v1 98684 3 + 158759 TTC s panTro5.chr3 201985911 3 - 202621043 TTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204753925 3 - 205426864 TTC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570457 3 + 86207423 TTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66053766 3 + 204787373 TTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985612 3 - 192460366 TTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097578 3 - 17224310 TTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17409735 3 - 41321030 TTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481198 3 - 101219884 TTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867185 3 - 924385 TTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709472 3 - 10587913 GTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042167 3 - 98464013 TTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27714454 3 + 27742158 TTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 251862 3 - 4835464 TTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3710489 3 + 4093027 TTC i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16590101 3 + 58134056 GTC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1781974 3 - 2187301 CCC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 584453 493 + 2414909 I e mm10.chr6 45753758 549 - 149736546 I e micMur3.chr32 1603569 507 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e otoGar3.GL873534 11050928 0 + 30473821 C a score=75555.000000 s hg38.chrUn_KI270749v1 98687 7 + 158759 Ttgtttt s panTro5.chr3 201985914 7 - 202621043 Ttgtttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204753928 7 - 205426864 Ttgtttt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570460 7 + 86207423 Ttgtttt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66053769 7 + 204787373 Ttgtttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985615 7 - 192460366 Ttgtttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097581 7 - 17224310 Ttgtttt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17409738 7 - 41321030 Ttgtttt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481201 7 - 101219884 Ttgtttt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867188 7 - 924385 Ttgtttt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709475 7 - 10587913 Ttgtttt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042170 7 - 98464013 Ttgtttt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27714457 7 + 27742158 Ttgtttt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 251865 7 - 4835464 Ttgtttt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3710492 7 + 4093027 Ttgtttt i aotNan1.NW_018502033v1 C 0 C 0 s dasNov3.JH563077 1781977 7 - 2187301 TTATTTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 584453 493 + 2414909 I e mm10.chr6 45753758 549 - 149736546 I e micMur3.chr32 1603569 507 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e otoGar3.GL873534 11050928 0 + 30473821 C e canFam3.chr20 16590104 0 + 58134056 C a score=1124293.000000 s hg38.chrUn_KI270749v1 98694 132 + 158759 agtccattctcacactgctaaacgatactacccaagactggataatttacaaagaaaagaggtttaattgactcacagttccacatggctggggaggcctcaggaaacttacaatcatggcagaaggagaaa s panTro5.chr3 201985921 128 - 202621043 agtccattctcacactgctaaacgatactacccaagactggataatttacaaagaaaagaggtttaattgactcacagttccacatggctggggaggcctcaggaaacttacaatcatggcaggag----aa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204753935 131 - 205426864 agtccattctcacactgctaaacgatactacccaagactggataatttacaaagaaaagaggtttaattgactcacagttccacatggctggggaggcctcaggaaacttacaatcatggcagaaggag-aa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570467 131 + 86207423 agtgcattctcacactgctaaacgatactacccaagactgcataatttataaagaaaagaggtttaattgactcacagttccacatggctggggaggcctcaggaaacttacagtcatggcagaaggag-aa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66053776 130 + 204787373 agttcattcttacactgctaaacagcactacccaagactgggtaatttataaagaaaagaggtttaattgactcacagttccacatggct-aggaggcctcaggaaacttacaatcatggcagaaggag-aa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985622 130 - 192460366 agttcattcttacactgctaaacagcactacccaagactgggtaatttataaagaaaagaggtttaattgactcacagttccacatggct-aggaggcctcaggaaacttacaatcatggcagaaggag-aa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097588 130 - 17224310 agttcattcttacactgctaaacagcactacccaagactgggtaatttataaagaaaagaggtttaattgactcacagttccacatggct-aggaggcctcaggaaacttacaatcatggcagaaggag-aa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17409745 130 - 41321030 agttcattcttacactgctaaacagcactacccaagactgggtaatttataaagaaaagaggtttaattgactcacagttccacatggct-aggaggcctcaggaaacttacaatcatggcagaaggag-aa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481208 130 - 101219884 aattcattcttacactgctaaacagcactacccaagactggataatttataaagaaaagaggtttaattgactcacagttccacatggct-aggaggcctcaggaaacttacaatcatggcagaaggag-aa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867195 130 - 924385 agttcattcttacactgctaaacagcactacccaagactgggtaatttataaagaaaagaggtttaattgactcacagttccacatggct-aggaggcctcaggaaacttacaatcatggcagaaggag-aa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709482 130 - 10587913 aattcattcttacactgctaaacagcactacccaagactggataatttataaagaaaagaggtttaattgactcacagttccacatggct-aggaggcctcaggaaacttacaatcatggcagaaggag-aa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042177 131 - 98464013 agtccattctcagagtgctaaacgatactgcccaagactgagtaatttatacagaaaagaggtttaattgactcacagtttcacatggctggggaggcctcaggaaacttacaatcatggcagaaggaa-aa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27714464 131 + 27742158 agtccattctcagactgctaaacgatactaccaaagactgggtaatttatacagaaaagagatttaattgattcacagtttcacatggctggggaggcctcgggaaacttacaatcatggcagaaggaa-aa i saiBol1.JH378125 C 0 I 300 s cebCap1.NW_016107467v1 251872 129 - 4835464 agtccattctcagactgctaaacgatactacccaagactgggtaatttatacaggaaagagatttaattgact--cagtttcacatggctgaggaggcctcggggaacttacaatcatggcagaaggaa-aa i cebCap1.NW_016107467v1 C 0 I 309 s aotNan1.NW_018502033v1 3710499 131 + 4093027 agtccattctcagactgctaaacaatactacccaagactgagtaatttatacagaaaagaggtttaattgactcacagtgtcacatggctggggaggcctcaggaaacttacaatcatggcagaaggaa-aa i aotNan1.NW_018502033v1 C 0 I 300 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 584453 493 + 2414909 I e mm10.chr6 45753758 549 - 149736546 I e micMur3.chr32 1603569 507 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e otoGar3.GL873534 11050928 0 + 30473821 C e canFam3.chr20 16590104 0 + 58134056 C e dasNov3.JH563077 1781984 0 - 2187301 C a score=10500.000000 s hg38.chrUn_KI270749v1 98826 1 + 158759 g s panTro5.chr3 201986049 1 - 202621043 g i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754066 1 - 205426864 g i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570598 1 + 86207423 g i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66053906 1 + 204787373 g i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985752 1 - 192460366 g i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097718 1 - 17224310 g i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17409875 1 - 41321030 g i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481338 1 - 101219884 g i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867325 1 - 924385 g i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709612 1 - 10587913 g i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042308 1 - 98464013 g i calJac3.chr15 C 0 I 300 s saiBol1.JH378125 27714895 1 + 27742158 g i saiBol1.JH378125 I 300 C 0 s cebCap1.NW_016107467v1 252310 1 - 4835464 g i cebCap1.NW_016107467v1 I 309 C 0 s aotNan1.NW_018502033v1 3710930 1 + 4093027 g i aotNan1.NW_018502033v1 I 300 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 584453 493 + 2414909 I e mm10.chr6 45753758 549 - 149736546 I e micMur3.chr32 1603569 507 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e otoGar3.GL873534 11050928 0 + 30473821 C e canFam3.chr20 16590104 0 + 58134056 C e dasNov3.JH563077 1781984 0 - 2187301 C a score=1815284.000000 s hg38.chrUn_KI270749v1 98827 228 + 158759 caagcacatcttacatggtggcaggtgagggaacatgagcaaaagcagggaaaactgccttataaagccatcagatctcatgataattcactcactat-cacgagaacagcataggggaaaccacctctacgatccaatcgtctcccatcagattcctccatccacacgtgaggaataccggtattacaattcaagaggaggtttgggtggggacacagccaaaAAGTA s panTro5.chr3 201986050 227 - 202621043 caagcacatcttacatggtggcaggtgagggaacatgagcaaaagcagggaaaactgccttataaagctatcagatctcatgataattcactcactat-cacgagaacagcataggggaaa-cacctctacgatccaatcgtctcccatcagattcctccaaccacacgtgaggattaccggtattacaattcaagaggaggtttgggtggggacacagccaaaAAGTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754067 228 - 205426864 caagcacatcttacatggtggcaggtgagggaacatgagcaaaagcagggaaaactgccttataaagccatcagatctcatgataattcactcactat-cacgagaacagcataggggaaaccacctctacgatccaatcgtctcccatcagattcctccaaccacacgtgaggattaccggtattataattcaagaggaggtttgggtggggacacagccaaaAAGTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570599 228 + 86207423 caagcacatcttacatggtggcaggtgagataacatgagcaggagcagggaaaactgccttataaagccatcagatctcatgacaattcactcactat-cacgagaacagcataagggaaatcacctctacgatccaatcatctcctatcagattcctccatccacacatggggattaccggtattacaattcaagaggaggtttgggtggggacacagccaaaaagta i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66053907 227 + 204787373 caagcacatcttacaaggtagcaggtgcgagaacatgagcaagagcagggaaaactgccttttaaaaccatcagatctcatgataattcactcactatccacgagaacagcataggggaaac--cctctacaatccaatcatctcccaccagattcctccattaaaacgtggggattaccagtaccacaattcaagaggaggtttgggtggggacacagccaaacagta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985753 227 - 192460366 caagcacatcttacaaggtagcaggtgcgagaacatgagcaagagcagggaaaactgccttttaaaaccatcagatctcatgataattcactcactatccacgagaacagcataggggaaac--cctctacaatccaatcatctcccaccagattcctccattaaaacgtggggattaccagtaccacaattcaagaggaggtttgggtggggacacagccaaacagta i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097719 227 - 17224310 caagcacatcttacaaggtagcacgtgcgagaacatgagcaagagcagggaaaactgccttttaaaaccatcagatctcatgataattcactcactatccatgagaacagcataggggaaac--cctctacaatccaatcatctcccaccagattcctccattaaaacgtggggattaccagtaccacaatccaagaggcggtttgggtggggacacagccaaacagta i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17409876 227 - 41321030 caagcacgtcttacaaggtagcaggtgcgagaacatgagcaagagcagggaaaactgccttttaaaaccatcagatctcacgataattcactcactatccacgagaacagcataggggaaac--cctctacaatccaatcatctcccaccagattcctccattaaaacatggggattaccagtatcacaattcaagaggaggtttgggtagggacacagccaaaccgta i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481339 227 - 101219884 caagcacgtcttacaaggtagcaggtgcgagaatatgagcaagagcagggaaaactgccttttaaaaccatcagatctcacgataattcactcactatccatgagaacagcataggggaaac--cctctacgatccaatcatctcccaccagattcctacattaaaatatggggattaccagtatcacaattcaagaggaggtttgggtggggacacagccaaacagta i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867326 227 - 924385 caagcacgtcttacaaggtagcaggtgcgagaacatgagcaagagcagggaaaactgccttttaaaaccatcagatctcacgataattcactcactatccacgagaacagcataggggaaac--cctctacaatccaatcatctcccaccagattcctccattaaaacatggggattaccagtatcacaattcaagaggaggtttgggtggggacacagccaaacagta i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709613 228 - 10587913 caagcacatcttacatgatggcaggtgcgagaacatgagcaagagcagggaaaactgccttttaaaaccatcagatctcacgataattcactcactat-catgagaacagcataggggaaactacctctacgatccaatcatctcccaccagattcctccattaaaacatggggattaccagtatcacaattcaagaagaggtttggctggggacacagccaaacagtg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042609 225 - 98464013 caagcacatcttacaaggtagtaggtgagagaacatgagcaagagccaggaaaactgccttataaaaccatcagatctcacggtaattcactt---at-cataagaacggtataggggaaaccacctctatgttccaatcatcatccactggggtcctcgatcaacacatggagattacaggtattacaattcaagaggggatttgggaggggacacagccaaacagta i calJac3.chr15 I 300 C 0 s saiBol1.JH378125 27714896 228 + 27742158 caagcacatcttacaaggtgataggtgagagaacatgagcaagagccaggaaaactgccttataaaaccatcagatctcacgataattcacttaccat-cacaagaacggcataggggaaaccacctctatgatccaacgatcgcccactggggtcctcgatcaacacatggggattacaggtattacaattcaagaggagatttgggtggggacacagccaaacagta i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252311 218 - 4835464 caagcacatcttacaatgtggtaggtgagagaacatgagcaagagccaggaaaactgccttataaaaccattagatctcacgctaattcacttaccat-cacaagaacggcataggggaaaccacctccatga----------gcccactggggtcctcgatcaacacatggggactacaggtattacaattcaagaggagatctgggtgggggcacagccaaacagta i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3710931 228 + 4093027 caagcacatcttacaagatggtaggtgagagaacatgagcaagagccaggaaaactggcttataaaaccatcagttctcacgataattcacttaccat-cacaagaacggcataggggaaaccaccactatgatccaatcatcgcccactggggtcctccatcaacacatggggattacaggtattacaattcaagaggagatttgggtggggacacagccaaacagta i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 584453 493 + 2414909 I e mm10.chr6 45753758 549 - 149736546 I e micMur3.chr32 1603569 507 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e otoGar3.GL873534 11050928 0 + 30473821 C e canFam3.chr20 16590104 0 + 58134056 C e dasNov3.JH563077 1781984 0 - 2187301 C a score=54321.000000 s hg38.chrUn_KI270749v1 99055 7 + 158759 ACACTTT s panTro5.chr3 201986277 7 - 202621043 ACACTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754295 7 - 205426864 ACACTTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570827 7 + 86207423 tcaCTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054134 7 + 204787373 tcaCCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985980 7 - 192460366 tcaCCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097946 7 - 17224310 tcaCCTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410103 7 - 41321030 tcaCCTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481566 7 - 101219884 tcaCCTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867553 7 - 924385 tcaCCTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709841 7 - 10587913 tcaCCTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042834 7 - 98464013 tcaCCTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27715124 7 + 27742158 tcaCCTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252529 7 - 4835464 tcaCCTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3711159 7 + 4093027 tcaCCTC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11050928 5 + 30473821 --ACCTT i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 584453 493 + 2414909 I e mm10.chr6 45753758 549 - 149736546 I e micMur3.chr32 1603569 507 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e canFam3.chr20 16590104 0 + 58134056 C e dasNov3.JH563077 1781984 0 - 2187301 C a score=30708.000000 s hg38.chrUn_KI270749v1 99062 3 + 158759 TTA s panTro5.chr3 201986284 3 - 202621043 TTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754302 3 - 205426864 TTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570834 3 + 86207423 TTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054141 3 + 204787373 TTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985987 3 - 192460366 TTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097953 3 - 17224310 TTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410110 3 - 41321030 TTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481573 3 - 101219884 TTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867560 3 - 924385 TTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709848 3 - 10587913 TTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042841 3 - 98464013 TTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27715131 3 + 27742158 TTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252536 3 - 4835464 TTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3711166 3 + 4093027 TTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11050933 3 + 30473821 TTT i otoGar3.GL873534 C 0 I 2 s canFam3.chr20 16590104 3 + 58134056 tta i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e proCoq1.NW_012148064v1 584453 493 + 2414909 I e mm10.chr6 45753758 549 - 149736546 I e micMur3.chr32 1603569 507 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e dasNov3.JH563077 1781984 0 - 2187301 C a score=47447.000000 s hg38.chrUn_KI270749v1 99065 4 + 158759 TTTA s panTro5.chr3 201986287 4 - 202621043 TTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754305 4 - 205426864 TTTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570837 4 + 86207423 TTTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054144 4 + 204787373 TTTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985990 4 - 192460366 TTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097956 4 - 17224310 TTTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410113 4 - 41321030 TTTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481576 4 - 101219884 TTTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867563 4 - 924385 TTTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709851 4 - 10587913 TTTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042844 4 - 98464013 TTTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27715134 4 + 27742158 TTTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252539 4 - 4835464 TTTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3711169 4 + 4093027 TTTA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 584946 4 + 2414909 TTTA i proCoq1.NW_012148064v1 I 493 C 0 s otoGar3.GL873534 11050938 1 + 30473821 ---G i otoGar3.GL873534 I 2 C 0 s canFam3.chr20 16590107 4 + 58134056 ttta i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e mm10.chr6 45753758 549 - 149736546 I e micMur3.chr32 1603569 507 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e dasNov3.JH563077 1781984 0 - 2187301 C a score=134597.000000 s hg38.chrUn_KI270749v1 99069 12 + 158759 TTACAATTTTAT s panTro5.chr3 201986291 12 - 202621043 TTACAATTTTAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754309 12 - 205426864 TTACAATTTTAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570841 12 + 86207423 TTACAATTTTAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054148 12 + 204787373 TTACAATTTTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60985994 12 - 192460366 TTACAATTTTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097960 12 - 17224310 TTACAATTTTGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410117 12 - 41321030 TTATAATTTTGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481580 12 - 101219884 TTACAATTTTGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867567 12 - 924385 TTACAATTTTGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709855 12 - 10587913 TTACAATTTTGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042848 12 - 98464013 TTACAATATTAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27715138 12 + 27742158 TTACAATTTTGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252543 12 - 4835464 TTACAATTTTAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3711173 12 + 4093027 TTACAATTTTAT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 584950 12 + 2414909 TTATAATTTTGT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11050939 11 + 30473821 TTAT-ATCTGAT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16590111 12 + 58134056 ttatattttaat i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1781984 12 - 2187301 TCATAACTTGAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e mm10.chr6 45753758 549 - 149736546 I e micMur3.chr32 1603569 507 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=300384.000000 s hg38.chrUn_KI270749v1 99081 22 + 158759 ATCATCCCTAGAAAATTGTTCC s panTro5.chr3 201986303 22 - 202621043 ATCATCCCTAGCAAATTGTTCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754321 22 - 205426864 ATCATCCCTAGCAAATTGTTCC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570853 22 + 86207423 ATCGTCCCTGGCAAATTGTTCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054160 22 + 204787373 ATCATCCCTAGCAAATTGTTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986006 22 - 192460366 ATCATCCCTAGCAAATTGTTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097972 22 - 17224310 ATCATCCCTAGCAAATTGTTCC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410129 22 - 41321030 ATCATCCCTAGCAAATTGTTCC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481592 22 - 101219884 ATCATCCCTAGCAAATTGTTCC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867579 22 - 924385 ATCATCCCTAGCAAATTGTTCC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709867 22 - 10587913 ATCATCCCTAGCAAATTGTTCC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042860 22 - 98464013 AACATCCTTACCAAAATGTTTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27715150 22 + 27742158 ATCATCCTTACCAAAATGTTTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252555 22 - 4835464 ATCATCCTTACCAAAATGTTTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3711185 22 + 4093027 ATCAACCTTACCAAAATGTTTC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1604076 22 - 9149476 atcattcctagcaaaatgttcc i micMur3.chr32 I 507 C 0 s proCoq1.NW_012148064v1 584962 22 + 2414909 ATCATTCCTAGCAAAATGTTCC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11050950 22 + 30473821 TTCACTCCAAGCAAAATGTTCC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16590123 22 + 58134056 atCATTCTTAGCAAAATGTTCC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1781996 22 - 2187301 ATCTTCCCTAACAAAATGTTCC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e mm10.chr6 45753758 549 - 149736546 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=534249.000000 s hg38.chrUn_KI270749v1 99103 39 + 158759 AAATTCTTGCCCATCCTCCATCAATAT------------------------CTAAAATTGCAC s panTro5.chr3 201986325 39 - 202621043 AAATTCTTGCCCATCCTCCATCAATAT------------------------CTAAAATTGCAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754343 39 - 205426864 AAATTCTTGCCCATCCTCCATCAATAT------------------------CTAAAATTGCAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67570875 39 + 86207423 AAATTCTTGCCCATCCTCCATCAATGT------------------------CTAAAATTGCAC i nomLeu3.chr21 C 0 M 374 s rheMac8.chr2 66054182 39 + 204787373 AAATTCTTGCCCATCCCCCATCAATGT------------------------CTAAAATTGCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986028 39 - 192460366 AAATTCTTGCCCATCCCCCATCAATGT------------------------CTAAAATTGCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11097994 39 - 17224310 AAATTCTTGCCCATCCCCCATCAATGT------------------------CTAAAATTGCAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410151 39 - 41321030 AAATTCTTGCCCATCCCCCATCAATGT------------------------CTAAAATTGCAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481614 39 - 101219884 AAATTCTTGCCCATCCCCCATCAATGT------------------------CTAAAATTGTGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867601 39 - 924385 AAATTCTTGCCCATCCCCCATCGATGT------------------------CTAAAATTGCAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709889 39 - 10587913 AAATTCTTGCCCATCCCCCATCAATGT------------------------CTAAAATTGCAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042882 39 - 98464013 AAATTCTTCCCCATCCTCCATCAGTGT------------------------CTAAAATTGTAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27715172 39 + 27742158 AAATTCTTGCCCATCCTCCATCAGTGT------------------------CTAAAATTGCAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252577 39 - 4835464 AAATTCTTGCCCATCCTCCATCAGTGT------------------------CTAAAATTGCAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3711207 39 + 4093027 AAATTCTTGCCCATCCTCCATCAGTGT------------------------CTAAAATTGCAC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1604098 39 - 9149476 atgTTCCTGCCAATCCTCCATTGATGT------------------------CTAAAATTGCAC i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 584984 39 + 2414909 ACGTTCCTGCCAATCCTCCATCAAAGT------------------------CTAAAATTGCAC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11050972 39 + 30473821 ACCTTCCTGCCAGTCCTCCATCAATTT------------------------CTAAAATTGCAC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45754307 63 - 149736546 ggattctGACACTACCTTCACCAAAATGTCTCCAAGTAACACCAACCTATACTGAATGCGCAA i mm10.chr6 I 549 I 2 s canFam3.chr20 16590145 39 + 58134056 AAGTTCTTGCCAAGCCCCCACCAATTT------------------------CTGAAATTGCAC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782018 37 - 2187301 AAGTTCTTGCCA--TCTTCAACAATGT------------------------TGAAAACTGTAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=1174979.000000 s hg38.chrUn_KI270749v1 99142 104 + 158759 TTGTAATTGAGAA--------------------------------TACTTGCTAAGGTTTTACTTGTACTTGCATATAGAATGGACTCAAGATATGAACGCTGTTTGTCACGATTTCATAAATGAAGACAAAACAG s panTro5.chr3 201986364 104 - 202621043 TTGTAATTGAGAA--------------------------------TACTTGCTAAGGTTTTACTTGTACTTGCATATAGAATGGACTCAAGATATCAACGCTGTTTGTCACGATTTCATAAATGAAGACAAAACAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754382 104 - 205426864 TTGTAATTGAGAA--------------------------------TACTTGCTAAGGTTTTACTTGTACTTGCGTATAGAATGGACTCAAGATATGAACGCTGTTTGTCACGATTTCATAAATGAAGACAAAACAG i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66054221 104 + 204787373 TTGTAACTGAGAA--------------------------------TACTTGCTAAAGTTTTACTTATACTTGCATATAGAATGGACTCAAGATATGAGCACTGTTCGTCACAATTTTATAAATGAAGGCAAAACAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986067 104 - 192460366 TTGTAACTGAGAA--------------------------------TACTTGCTAAAGTTTTACTTATACTTGCATATAGAATGGACTCAAGATATGAGCACTGTTCGTCACAATTTTATAAATGAAGACAAAACAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098033 104 - 17224310 TTGTAACTGACAA--------------------------------TACTTGCTAAAGTTTTACTTATACTTGCATATAGAATGGACTCAAGATATGAGCACTGTTCGTCACAATTTTATAAACGAAGACAAAACAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410190 104 - 41321030 TTGTAACTGAGAA--------------------------------TACTTGCTAAGGTTTTACTTACACTTGCATATAGAATGGACTCAAGATATGAGCACTGTTCGTCACAATTTTATAAATGAAGACAAAACAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481653 104 - 101219884 TTGTAACTGAGAA--------------------------------TACTTGCTAAGGTTTTACTTATACTTGCATATAGAATGGACTCAAGATATGAGCACTGTTTGTCACAATTTTATAAATGAAGACAAAACAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867640 104 - 924385 TTGTAACTGAGAA--------------------------------TACTTGCTAAGGTTTTACTTATACTTGCATATAGAATGGACTCAAGATATGAGCACTGTTTGTCACAATTTTATAAATGAAGACAAAACAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6709928 104 - 10587913 TTGTAACTGAAAA--------------------------------TACTTGCTAAGGTTTTACTTATACTTGCATATAGAATGGACTCAAGATATGAGCACTGTTTGTCACAATTTTATAAATGAAGACAAAACAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46042921 89 - 98464013 TT----CTGAGAA--------------------------------TATTTGCTA-----------GTACTTGCATATAGAATGGACTCAAAATGTGAGCACTGTTTGTCACAGTATTCTAAATGAAGACAAAATAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27715211 104 + 27742158 TTGTAACTGAGAA--------------------------------TATTTGCTAAGGTTTTACTGGTACTTGCATATAGAATGGACTCAAAATGTGAGCACTCTTTGTCACAGTATTATAAATGAAGACAAAATAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252616 104 - 4835464 TTGTAACTGAGAG--------------------------------TATTTGCTAAGGTTTTACTGGTACTTGCATATAGAATGGACTCAAAATGTGGGCACTGTTTGTCACAGTATAATAAATGAAGACAAAATAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3711246 104 + 4093027 TTGCAACTGAGAA--------------------------------TATTTACTAAGGTTTTACTGGTACTTGCATATAGAATGGACTCAAAATGTGAGCACTGTTTGTCACAGTATTATAAATGAAGACAAAATAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1604137 104 - 9149476 TTGTAATTGAAAA--------------------------------TATTTGCTGAGGTGTTCCTTGCACTTGCACGTAGAATGAGCTCAAGAGGTGAGCACTGGCTGTCACCATTTTATGAATGAGGACAAAATAG i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 585023 120 + 2414909 TTGTAATTGAAAATATTTGCTAAGGTA----------------CCTATTTGCTAAGGTGTTCCTTGTACTTGCACGTAGAATGAACTGAAGGAGTGAGCACTGGTTGTCACCATTTTATGAATGAGGACAAAATAG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051011 104 + 30473821 TTGCAATTGAGAA--------------------------------TATTTGCTAAGGCTTAATATGCACTCACATGTGGAATGGACTGGAGAGGTGAGCGCTGCTTGTCACCGTTTTATAAATGAGGACAAAATAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45754372 92 - 149736546 CTGTATCTAAGAG--------------------------------CATTTGCTCAAGTTTTCCTGGCATTTGCCTATACAGCAGATTCAATGTACCACCGAT-----------TTTTATGAACGAAGAC-TACTAG i mm10.chr6 I 2 C 0 s canFam3.chr20 16590184 135 + 58134056 TTATAATTGAGAATGTTTGCAAAAACAAAACAAAACAAAAAAGAATGTTTGCTACAGTTTGACTAGCATCTGCACATAGAATGGACTCAAGATGCCAGTATTGTCTGTTACCATTCT-TGAATGCAGACAAAATCA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782055 83 - 2187301 TTG----TGAAAG--------------------------------GACTTGCTAAGGGTTTTCTGACACTTACACATAGAATAGACTCAAGATGCCAGGACTGC-----------------ACGAAAACAAAATAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e nomLeu3.chr21 67570914 374 + 86207423 M a score=117776.000000 s hg38.chrUn_KI270749v1 99246 10 + 158759 GTATTAAATA s panTro5.chr3 201986468 10 - 202621043 GTATTAAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754486 10 - 205426864 GTATTAAATA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67571288 10 + 86207423 GTATTAAATA i nomLeu3.chr21 M 374 C 0 s rheMac8.chr2 66054325 10 + 204787373 GTATTGAATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986171 10 - 192460366 GTATTGAATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098137 10 - 17224310 GTATTGAATC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410294 10 - 41321030 GTATTGAATC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481757 10 - 101219884 GTATTGAATC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867744 10 - 924385 GTATTGAATC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710032 10 - 10587913 GTATTGAATC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46043010 10 - 98464013 ATATTAAATt i calJac3.chr15 C 0 I 665 s saiBol1.JH378125 27715315 10 + 27742158 ATGTTAAATC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252720 10 - 4835464 ATATTAAATC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3711350 10 + 4093027 ATATTAAATC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1604241 10 - 9149476 ATTTTAAATC i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 585143 10 + 2414909 ATTTTAAATC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051115 10 + 30473821 ATTTTAAATC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45754464 10 - 149736546 ACATTACCTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16590319 10 + 58134056 ATTTTAAATC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782138 10 - 2187301 ATTTTAAATA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=1766999.000000 s hg38.chrUn_KI270749v1 99256 127 + 158759 TTCACCCTGTTTTCTGGATGCTCAGTTTCATAATAAATGCCTGCCTTGGTTCATGCATCAGTactgtttccacttggcttccttggacatcactttctcttaacttttctcctacctctctggccct s panTro5.chr3 201986478 127 - 202621043 TTCACCCTGTTTTCTGGATGCTCAGTTTCATAATAAATGCCTGCCTTGGTTCATGCATCAGTactgtttccacttggcttccttggacatcactttctcttaacttttctcctacctctctggccct i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754496 127 - 205426864 TTCACCCTGTTTTCTGGATGCTCAGTTTCATAATAAATGCCTGCCTTGGTTCATGCATCAGTactgtttccacttgacttccttggacatcactttctcttaacttttctcctacctctctggccct i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67571298 127 + 86207423 TTCACCCTGTTTTCTGGATGCTCAGTTTCATAATAAATGCCTGCCTTGGTTCATGCATCAGTactgtttccacttggcttccttggacatcgctttctcttaacttttctcctacctctctggccct i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054335 127 + 204787373 TTCACCCTGTTTTCTGGATGCCCAGTTTCATGATAAATGCCTGCCTTGGTTCATGCATCAGTactatttccacttggcttccttggacatcactttcgcttaatttttctcctacctccctagtcct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986181 127 - 192460366 TTCACCCTGTTTTCTGGATGCCCAGTTTCATGATAAATGCCTGCCTTGGTTCATGCATCAGTactatttccacttggcttccttggacatcactttcgcttaatttttctcctacctccctagtcct i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098147 127 - 17224310 TTCACCCTGTTTTCTGGATGCCCAGTTTCATGATAAATGCCTGCTTTGGTTCATGCATCAGTactatttccacttggcttccttggacatcacttttgcttaatttttctcctacctccctagtcct i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410304 127 - 41321030 TTCACCCTGTTTTCTGGATGCCCAGTTTCATGATAAATGCCTGCCTTGGTTCATGCATCAGTactatttccacttggcttccttggacatcactttcgcttaatttctctcctacctccctagtcct i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481767 127 - 101219884 TTCACCCTGTTTTCTGGATGCCCAGTTTCATGATAAATGCCTGCCTTGGTTCATGCATCAGTactatttccacttggcttccttggacaccatttttgcttaatttttctcctacctccctagtcct i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867754 127 - 924385 TTCACCCTGTTTTCTGGATGCCCAGTTTCATGATAAATGTCTGCCTTGGTTCATGCATCAGTactatttccacttggcttccttggacatcactttcgcttaatttttctcctacctccctagtcct i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710042 127 - 10587913 TTCACCCTGTTTTCTGGATGCCCAGTTTCATAATAAATGCCTGCCTTGGTTCATGCATCAGTactgtttccacttggcttccttggacatcactttcacttgatttttctcctacctccctggtcct i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46043685 127 - 98464013 TTTATCCTGTTTTCTGGATGCTCAGTTTCATAATAAATGCCTGCCTTGGTTCATGCATCAGTacagcttccacttcgcttccttggacatcactttctcttaatttttatcctgcctctctggcccc i calJac3.chr15 I 665 C 0 s saiBol1.JH378125 27715325 127 + 27742158 TTCATCCTGTTTTCTGGATGCTCAGTTTAATAATAAATGCCTGCCTTGGTTCATGCATCAGTactgcttccacttggtttccttggacatcactttctcttaatttttatcctgcctctctggcccc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252730 126 - 4835464 TTCATCCTGTTTTCTGGATGCTCAGTTTCATAATAAATGTCTGCCTTGGTTCACGCATCAGTactgcttccacttggcttcgttggacatcactttctgttcatttttatcctgcctctctggtcc- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3711360 127 + 4093027 TTCACCCTGTTTTCTGGATGCTCGGTTTcataatgaatccctgccttggttcatgcatcagtactgcttccactcggcttccttggacatcactttctcttaatttttatcctgcctctctggcccc i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1604251 127 - 9149476 TTCACACTGTTTTCTGGGTGGTCAGTTTCGTGATAAATGCCTGTCTTGATTCATGCATCagcactacttccatttggcttacttggctgtcactctctctaaaatttcctcctacctctctggccct i micMur3.chr32 C 0 I 18 s proCoq1.NW_012148064v1 585153 127 + 2414909 TTCACACTGTTTTCTGGGTGGTCAGTTTTGTGATAAATGCCTGTCTTGATTCATGCGTCAGTactactttcattcagcttacttggctgtcactctctcttaaatttcctcctacctctctggacct i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051125 125 + 30473821 TGCACACGGTTTTCCAAGTGCTCGGTGTCATGATAAATACCAGCCCTAATTCATGCATCAGTactgtttccatttggattatctgaatgtca--ctctcttaatttatctcctacctctctggcccc i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45754474 123 - 149736546 TTTATGCTGTTTTCCTGGTGCTCAGTGTGCTAATGAATGGCAGTTTTGGTTCTGGAGTCAGTCCTGCTGGCTCATGGCATCCAGAGAAATCAGT----CCTAGATGCTCTCTCACCTCTCTAGCTCT i mm10.chr6 C 0 C 0 s canFam3.chr20 16590329 124 + 58134056 TTCACA--GTTTTCTGGGTATTC-GTCTCATAATGATTGCCAGTCTTGGTTCATGCACCATTactatttctacttggcttctgtgaccatcattctctcttagtttttctttgacctctttggcgct i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782148 118 - 2187301 ACCACACTGTTTTCCGGGTGCCCACTTTCACAATCAATGCAGGTTTT-ATTCATG--------TCAtttttacttggcttccttggacatcaatctctgatgattttccccctacctctccagcact i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=94580.000000 s hg38.chrUn_KI270749v1 99383 7 + 158759 tttctct s panTro5.chr3 201986605 7 - 202621043 tttctct i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754623 7 - 205426864 tttctct i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67571425 7 + 86207423 tttctct i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054462 7 + 204787373 tttctct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986308 7 - 192460366 tttctct i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098274 7 - 17224310 tttctct i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410431 7 - 41321030 tttctct i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481894 7 - 101219884 tttctct i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867881 7 - 924385 tttctct i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710169 7 - 10587913 tttctct i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46043812 7 - 98464013 tttctct i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27715452 7 + 27742158 tttctct i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252856 2 - 4835464 -----ct i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3711487 7 + 4093027 tttctct i aotNan1.NW_018502033v1 C 0 I 910 s proCoq1.NW_012148064v1 585280 7 + 2414909 tttctct i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051251 7 + 30473821 tttctct i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45754597 1 - 149736546 ------T i mm10.chr6 C 0 C 0 s canFam3.chr20 16590453 7 + 58134056 tttctct i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782266 7 - 2187301 ttccttt i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e micMur3.chr32 1604378 18 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=257445.000000 s hg38.chrUn_KI270749v1 99390 30 + 158759 tgaacagtcttgataatcctaccttatctc s panTro5.chr3 201986612 30 - 202621043 tgaacactcttgataatcctaccttatctc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754630 30 - 205426864 tgaacactcttgataatcctaccttatctc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67571432 30 + 86207423 tgaacactcttgataatcctaccttatctc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054469 30 + 204787373 tgaacactcttgataatcctactttatatc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986315 30 - 192460366 tgaacactcttgataatcctactttatatc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098281 30 - 17224310 tgaacactcttgataatcctactttatatc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410438 30 - 41321030 tgaacactcttgataatcctactttatatc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481901 30 - 101219884 tgaacactcttgataatcctaccttatatc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867888 30 - 924385 tgaacactcttgataatcctactttatatc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710176 30 - 10587913 tgaacactcttgataatcctaccttatccc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46043819 30 - 98464013 tgaacactcttgccaatcctaccttatctc i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27715459 30 + 27742158 tgaacactcttgcctatcctaccttatctc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252858 30 - 4835464 tgaacactcttgccaatcctaccttatctc i cebCap1.NW_016107467v1 C 0 C 0 s proCoq1.NW_012148064v1 585287 20 + 2414909 tgaacacccttgcacatcct---------- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051258 20 + 30473821 agaacagccttgtaggtcct---------- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45754598 29 - 149736546 TGCACATCTTTGCTGAATACATCACATTT- i mm10.chr6 C 0 C 0 s canFam3.chr20 16590460 30 + 58134056 tgaacacccttgctggccccaaatcatttt i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782273 30 - 2187301 agattgtccttactgatctcacctcatttt i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e micMur3.chr32 1604378 18 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e aotNan1.NW_018502033v1 3711494 910 + 4093027 I a score=2424509.000000 s hg38.chrUn_KI270749v1 99420 217 + 158759 cctgccctcttaaaatgtaagtgccttaagctcttggtatttctcctccccatttgtgc----------tttagtaa----------ctcagtattttctagaggctggcagcatccaca--tatatctccagataagacctctgctagaaaagctacactcatac----at--atttacccctttgctttctccatttggatgttg----aataaccatgtagaa--aataacaagtccaaaac-tcaggt s panTro5.chr3 201986642 217 - 202621043 cctgccctcttaaaatgtaagtgcctcaagctcttggtatttctcttccccgtttgtgc----------tttagtaa----------ctcagtattttctagaggctggcagcatccaca--tatatctccagatgagacctctgctagaaaagctagactcatac----at--atttacccttttgctttctccatttggatgttg----aataaccatgtagaa--aataacaagtccaaaac-tcaggt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754660 216 - 205426864 cctgccctctt-aaatgtaagtgcctcaagctcttggtatttctcttccccgtttgtgc----------tttagtaa----------ctcagtattttctagaggctggcagcatccaca--tatatctccagataagacctctgctagaaaagctagactcataa----at--atttacccctttgctttctccatttggatgttg----aataaccatgtagaa--aataacaagtccaaaac-tcaggt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67571462 218 + 86207423 cctgccctcttaaaatgtaagtgccccaagctcttgctatttctcttccccttttgtgc----------tttagtaa----------ctcagtattttctagaggctggcagcatccaca--tatatctccagataagacctctgctagaaaagctagactcatac----ata-atttacctcttcgctttctccatttggatgttg----aataaccacgtagaa--aataacaagtccaaaac-tcaggt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054499 216 + 204787373 cctgtcatcttaaaatgtaagtgccccaagctcttggtatttctcttctccttttgtgc----------tttagtaa----------ctcagtattttctagaggctggcagcatccaca--tatatctccagataagacctctgctagaaaagctagactcatac----ct--atttgcctctttgc-ttctctatttggatgttg----aataaccgtgtagaa--aataacaagaccaaaac-ccaggt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986345 216 - 192460366 cctgtcatcttaaaatgtaagtgccccaagctcttggtatttctcttctccttttgtgc----------tttagtaa----------ctcagtattttctagaggctggcagcatccaca--tatatctccagataacacttctgctagaaaagctagactcatac----ct--atttacctctttgc-ttctctatttggatgttg----aataaccgtgtagaa--aataacaagaccaaaac-ccaggt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098311 216 - 17224310 cctgtcatcttaaaatgtaaatgccccaagctcttggtatttctcttctccttttgtgc----------tttagtaa----------ctcagtattttctagaggctggcagcatccaca--tatatctccagataagacctctgctagaaaagctagactcatac----ct--atttacctctttgc-ttctctatttggatgttg----aataaccgtgtagaa--aataacaagaccaaaac-ccaggt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410468 216 - 41321030 cctgtcatcttaaaatgtaagtgccccaagctcttggtatttctcttctccttttgtgc----------tttagtaa----------ctcagtattttctagaggctggcagcatccaca--tatatctccagataagacctctgctagaaaagctagactcatac----ct--atttacctctttgc-ttctctatttggatgttg----aataaccgtgtagaa--aataacaagatcaaaac-ccaggt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64481931 217 - 101219884 cctgtcatcttaaaatgtaagtgccccaagctcttggtatttctcttctccttttgtgc----------tttagtaa----------ctcagtgttttctaaaggctggcagcatccaca--tatatctccagataagacttctgctagaaaagctagactcatac----at--atttacctctttgctttctctatttggatgttg----aataaccatgtaaaa--aataacaagaccaaaac-ccaggt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 867918 216 - 924385 cctgtcatcttaaaatttaagtgccccaagctcttggtatttctcttctccttttgtgc----------tttagtaa----------ctcagtattttctagaggctggcagcatccaca--tatatctccagataagacctctgctagaaaagctagactcatac----ct--atttacctctttgc-ttctctatttggatgttg----aataaccgtgtagaa--aataacaagaccaaaac-ccaggt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710206 217 - 10587913 cctgtcatcttaaaatgtaagtgccccaagctcttggtatttctcttctccttttgtgc----------tttagtaa----------ctcagtattttctagaggctggcagcatccaca--tatatctccagataagacctctgctagaaaagctagactcatac----at--atttacctctttgctttctctatttggatgttg----aataaccatgtagaa--aataacaagaccaaaac-ccaggt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46043849 221 - 98464013 cctgccctcttaaaatgtaagtgccccaagctcttggtatttgtctcctccttttgtgc----------tttaataa----------ctcggtattttctagaggttggcagcatccaca--tatatctctagataggacctctgctagaaaagctagactcatac----at--acttatctctttactttctgaatttggacattggctaaacaaacatgtagaa--aataacaagtccataac-tcaggt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27715489 214 + 27742158 cctgccctcttaaaatttaagtgccccaagctcttggtatttgtctcctc---ttgtgc----------tttaataa----------ctcagtattttctagaggttggcagcatccaca--tctatctccagataggacctctgctagaaaagctagactcatac----at--acttatctctttgctttttcaattttgacattg----aataaatgtgcagaa--aataacaagtccataac-tgaggt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 252888 215 - 4835464 cctgccctcttaaaatgtaagtgccccaagctcttggtatttgtctcctccttttgtgc----------tttaataa------------tggtattttctagaggttggcagcatctaca--tatatctccagataggacctctgctagaaaatctagactcatat----at--acttatctctttactttctcaatttggacgttg----aataaacatgtagaa--aataacaagtccataac-tcaggt i cebCap1.NW_016107467v1 C 0 C 0 s micMur3.chr32 1604396 219 - 9149476 cctgccctcttaagatgtaagtgctccaagtactggatcttcctcttttccctttatgc----------tttaatga----------ctcaatcttttctaggtgtggacagtgtgtaca--tacatctccagattggacctcttctaggaaagctagcctcatac----at--atctacctccttgctttctctgtttggatgttg----gatacacatgtaaaaatattagcaagtccaacac-tcaggt i micMur3.chr32 I 18 C 0 s proCoq1.NW_012148064v1 585307 214 + 2414909 ---ggcctcttaaaatgtaagcgctccaagtactggatcttcctcttttccttttatgc----------tttaatga----------ctcaatcttttctagatgtggacagtgtctaca--tacatctccagataggatctcttctaggaaagctagactcatac----at--atctacctccttgctttctctatttggatgttg----gatacacatgtaaaa--attagcaagtccaaaac-tcaggt i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051278 213 + 30473821 ---gccttcttaaaatgtgagggttttaagttcttgatcttcctcctcttcctttgtac----------tttaatga----------ctcaatattttccagatgtgtatag-gcttaca--tatatgtccagaaaggacctcttcttggaaagctatactcacat----at--atctaccttttggcttt-tttatttggatgtta----aatacacatgtaaaa--cttaacgtatctaaaacttcagat i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45754627 207 - 149736546 TTGGACCCCATCAAATGTGGGCACTCTAA-TACTAGGTCCGTGTGCTTTCCAATTCTGC----------TTTTAT--------------CTACTTTTTGTCTAGGCCAGCAACTTCCACT--TAGGACTCTACATACGATTCTAAATATGAAAATTA--TTCATAC----AT--TTTCCTAACTTTTG-TTTTCTGTTTGGATGTGA----AGTAG-CATGCA-AG--CTTAATGAACTCAAAAT-CCAGGT i mm10.chr6 C 0 I 2272 s canFam3.chr20 16590490 230 + 58134056 gctgccttcttaaaattgaagtggct-aagctcagggtcatccttttcttcctctgtgc----------tttcatcaagtttcctggctcaatgttttctatacactggcaactctcacatttatatctccagataggacctcttctaggaatgctaggttcatac----atgcatctatctccttgttttctcctctttgatgttg----aacagacatgtaaaa--cttaacaaatcccaaac-tcaggt i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782303 224 - 2187301 tctgtcctcttaagattgaagagttccaagttcttggtcttcctctc-----tttgtactcgcaccatgtttcaggg----------tttgatattttccatacactggcaattcccacatttctatctccagataggac-tctcattgaaatacaaatcccatacgcatat--atatgtatgcttgctttctcttcttggatgttg----aataaacatgtgaaa--gtta---agaccaaaac-tcccat i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e aotNan1.NW_018502033v1 3711494 910 + 4093027 I a score=792550.000000 s hg38.chrUn_KI270749v1 99637 68 + 158759 cctgatttttcaccttcaaatcagcatctctcatattttt--ccaac---tca---gtaaatgacagctacattct s panTro5.chr3 201986859 68 - 202621043 cctgatttttcaccttcaaatcagcatctctcatattttt--ccaac---tca---gtaaatcacagctacattct i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754876 68 - 205426864 cctgatttttcaccttcaaatcagcatctctcatattttt--ccaac---tca---gtacatcacagctacattct i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67571680 68 + 86207423 cctgatttttcaccttcaaatcagcatctctcatattttt--ccaac---tca---gtaaatgacagccacattct i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054715 68 + 204787373 cctgatttttcaccttcaaatcagcatctcttatattttt--ccaac---cca---gtaaatgacagctacactct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986561 68 - 192460366 cctgatttttcaccttcaaatcagcatctcttatattttt--ccaac---cca---gtaaatgacagctacactct i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098527 68 - 17224310 cctgatttttcaccttcaaatcagcatctcttatattttt--ccaac---cca---gtaaatgacagctacactct i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410684 68 - 41321030 cctgatttttcaccttcaaatcagcatctcttatattttt--ccaac---cca---gtaaaggacagctacactct i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482148 68 - 101219884 cctgatttttcaccttcaaatcagcatctcttatattttt--ccaac---cca---gtaaatgacagctacactct i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868134 68 - 924385 cctgatttttcaccttcaaatcagcatctcttatattttt--ccaac---cca---gtaaatgacagctacactct i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710423 68 - 10587913 cctgatttttcaccttcaaatcagcatctctcatattttt--ccaac---cca---gtaaatgacagctacattct i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044070 68 - 98464013 cctgatttttcaccttcaaatcagcatctttcatattttt--ccaac---tca---gtaaatgacagctacattct i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27715703 68 + 27742158 cctgatttttcaccttcaaatcagcatctttcatattttt--tcaac---tca---gttaatgacagcaacattct i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 253103 68 - 4835464 cctgatttttcaccttcgaatcagcatctttcatattttt--ccagc---tca---gtacatgacagctacattct i cebCap1.NW_016107467v1 C 0 I 342 s micMur3.chr32 1604615 71 - 9149476 cctgattttttagtttcaaattagcaactctcatattttt--cccac---tacttggtaaatgacaagtacactct i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 585521 71 + 2414909 cctgattttttagcttcaaattagcaactcctatattttt--cccac---tacttggtaaatgacaactacactct i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051491 70 + 30473821 cctgatttttcagcttcaaattaacaaccgtcatagtttc--cctac---tcctt-ataaatgacagctacctttt i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16590720 70 + 58134056 cgtgatttttcaccttgaaatcagccaatcccaaattctt--ccaacaagtca---gtaaataagagctacctgt- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782527 70 - 2187301 cctgatttttctcctgtaaactagctcctcctatattcttccccaat---gtg---gaaaatgacagcaatatcct i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e mm10.chr6 45754834 2272 - 149736546 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e aotNan1.NW_018502033v1 3711494 910 + 4093027 I a score=65796.000000 s hg38.chrUn_KI270749v1 99705 8 + 158759 tccacatg s panTro5.chr3 201986927 8 - 202621043 gccacatg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754944 8 - 205426864 gccacatg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67571748 8 + 86207423 gccacatg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054783 8 + 204787373 gcctcatg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986629 8 - 192460366 gcctcatg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098595 8 - 17224310 gcctcatg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410752 8 - 41321030 gcctcatg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482216 8 - 101219884 gcctcatg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868202 8 - 924385 gcctcatg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710491 8 - 10587913 gccacatg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044138 8 - 98464013 gcccgatg i calJac3.chr15 C 0 I 303 s saiBol1.JH378125 27715771 8 + 27742158 gcccaatg i saiBol1.JH378125 C 0 I 303 s micMur3.chr32 1604686 8 - 9149476 gccagata i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 585592 8 + 2414909 gctagata i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051561 8 + 30473821 gccagaca i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16590790 8 + 58134056 gtcagatg i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782597 8 - 2187301 gccagatg i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e mm10.chr6 45754834 2272 - 149736546 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e aotNan1.NW_018502033v1 3711494 910 + 4093027 I e cebCap1.NW_016107467v1 253171 342 - 4835464 I a score=263943.000000 s hg38.chrUn_KI270749v1 99713 30 + 158759 -----ctaaaaactcttggaga-cattgtcattcga s panTro5.chr3 201986935 30 - 202621043 -----ctaaaaactcttggaga-catcttcattcaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754952 30 - 205426864 -----ctaaaaactcttggaga-catcttcattcaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67571756 30 + 86207423 -----ctaaaaactcttggaga-catcttcattcaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054791 30 + 204787373 -----ctaaaaaatcttggaga-catcttcattcaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986637 30 - 192460366 -----ctaaaaaatcttggaga-catcttcattcaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098603 30 - 17224310 -----ctaaaaaatcttggaga-catcttcattcaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410760 30 - 41321030 -----ctaaaaaatcttggaga-catcttcattcaa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482224 30 - 101219884 -----ctaaaaaatcttggaga-catcttcattcaa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868210 30 - 924385 -----ctaaaaaatcttggaga-catcttcattcaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710499 30 - 10587913 -----ctaaaaaatcttggaga-catcttcattcaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044449 31 - 98464013 -----ccaaaaaatcttggagattatctttattcat i calJac3.chr15 I 303 C 0 s saiBol1.JH378125 27716082 31 + 27742158 -----ccaaaaaatcttggagattatcttcgttcat i saiBol1.JH378125 I 303 C 0 s micMur3.chr32 1604694 30 - 9149476 -----atcaaaaatcttggcgg-catctttgttcaa i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 585600 30 + 2414909 -----atcaaaaatcttggtgg-catctttgttcga i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051569 28 + 30473821 -----ctc-aatatcgtggcag-cacctttattta- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16590798 30 + 58134056 -----ctcaaaaatcttggaga-cacttttacagaa i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782605 35 - 2187301 ctcaggttaaaaatcttggaaa-gcattttattcag i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e mm10.chr6 45754834 2272 - 149736546 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e aotNan1.NW_018502033v1 3711494 910 + 4093027 I e cebCap1.NW_016107467v1 253171 342 - 4835464 I a score=2489446.000000 s hg38.chrUn_KI270749v1 99743 236 + 158759 ccctttgtcttgtat---------------------tctac-atctag-------------------------------------------------------------------------------------------tttatcaggtaaagcagttacctgtaccttcaaaatacagttaaacaaaatcctaccc--tttttcttggtcct----ccctgctatgattctggtccaacccactaaactcttttgtctggattattaaaatagtctccctgattcctttttgccacccacaaagccagagaaatcctgttaaaacacaagattaatgctgcataattccttttc s panTro5.chr3 201986965 236 - 202621043 ccctttgtcttgtat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tttgtcaggtaaagcagttacctgtaccttcaaaatacagttaaacaaaatcctaccc--tttttcttggtcct----ccctgctatgattctggtccaacccactaaactcttttgtctagattattaaaatagtctccctgattcctttttgccacccacaaagccagagaaatcctgttaaaacacaagattaatgctgcataattccttttc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204754982 236 - 205426864 ccctttgtcttgtat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tttatcaggtaaagcagttacctgtaccttcaaaatacagttaaacaaaatcctaccc--tttttcttggtcct----ccctgctatgattctggtccaacccactaaactcttttgtctggattattaaaatagtctccctgattcctttttgccacccacaaagccagagaaatcctgttaaaacacaagattaatgctgcataattccttttc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67571786 236 + 86207423 ccctttgtcttgtat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tttatcaggtaaagcagttacctgtaccttcaaaatacagttaaacaaaatcctaccc--tttttctttgtcct----tcctgctatgattctggtccaacccactaaactcttttgtctggtttattaaaatagtctccctgattcctttttgccacccacaaagccagagaaatcctgttaaaacacaagattaatgttgtataattccttttc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66054821 237 + 204787373 ccttttgtcttgtat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tttatcaggtaaagcagttacctgtaccttcagagtacagttaaacaaaatcctaccc-ttttttcttggtcct----ccctgctatgattctagtccaacccactaaactcttttgcctggattattaaaatactctccctgattcctttttgctgcctacaaagccagagaaatcctgttaaaacacaagattaatgttgtataattccttttc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986667 236 - 192460366 ccttttgtcttgtat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tttatcaggtaaagcagttacctgtaccttcagagtacagttaaacaaaatcctaccc--tttttcttggtcct----ccctgctatgattctagtccaacccactaaactcttttgcctggattattaaaatactctccctgattcctttttgctgcctacaaagccagagaaatcctgttaaaacacaagattaatgttgtataattccttttc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098633 236 - 17224310 ccttttgtcttgtat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tttatcaggtaaagcagttacctgtaccttcagagtacagttaaacaaaatcctaccc--tttttcttggtcct----ccctgctatgattctagtccaacccactaaactcttttgcctggattattaaaatactctccctgattcctttttgctgcctacaaagccagagaaatcctgttaaaacacaagattaatgttgtataattccttttc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17410790 236 - 41321030 ccttttgtcttgtat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tttatcaggtaaagcagttacctgtaccttcagagtacagttaaacaaaatcctaccc--tttttcttggtcct----ccctgctatgatactagtccaacccactaaactcttttgcctggattattaaaatactctccctgattcctttttgctgcctacaaagccagagaaatcctgttaaaacacaagattaatgttgtataattccttttc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482254 236 - 101219884 ccttttgtcttgtat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tttatcaggtaaagcagttacctgtaccttcagagtacagttaaacaaaatcctaccc--tttttcttggtcct----ccctgctatgattctggtccaacccactaaactcttttgcctggattattaaaatagtctccctgattcctttttgctgcctacaaagcctgagaaatcctgttaaaacacaagattaatgttgtataattccttttc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868240 236 - 924385 ccttttgtcttgtat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tttatcaggtaaagcagttacctgtaccttcagagtacagttaaacaaaatcctaccc--tttttcttggtctt----ccctgctatgattctagtccaacccactaaactcttttgcctggattattaaaatactctccctgattcctttttgctgcctacaaagccagagaaatcctgttaaaacacaagattaatgttgtataattccttttc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710529 327 - 10587913 ccttttgtcttgtag---------------------tctac-atctaattgactacaggtaaagcagttacctgtaccttcagagtTAAGCAGTTACCTGTACCTTCAGAGGTACAGCAGGCAAAGCAGTTTTACCTGCTTGatcaggtaaagcagttacctgtaccttcagagtacagttaaacaaaatcctaccc--tttttcttggtcct----ccctgctatgattctggtccaacccactaaactcttttgcctggattattaaaatagtctccctgattcctttttgctgcctacaaagccagagaaatcctgttaaaacacaagattaatgttgtataattccttttc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044480 219 - 98464013 cccttttccttatat---------------------tctac-atgtaa-------------------------------------------------------------------------------------------tctctcaggtaaagcaattacctctactttcaaagtacagttaaacaaaattctaccc--cttttcttggtcct----ccctgatatgattctggtccagcccactaaactcttttg-----------aaaatagtctccctgattcctttttgcctcctataaagccagagaaatcct------acacaagattaatgttgtataattccttttt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716113 219 + 27742158 ccctttgccttatat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tctatcaggaaaagcagttacctctactttcgaagtagagttaaacaaaatcctaccc--cttttcttggtcct----ccctgctatgattctggtccaacccactaaactcgtttg-----------aaaatagtctccctgattcctttttgcctcctataaagccagagaaatcct------acacaagattaatgttgtgtaattccttttc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 253513 219 - 4835464 ccctttgccttatat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tctatcaggtaaagcagttacctctactttcaaagtacagttaaacaaaatccttctc--cttttcttggtcct----ccctgctatgattctggtccaacccactaAACTATTTTG-----------AAAATAGTCTCCCCGATTCCTTTTTACCTCCTATAAAGCCAGAGAAATCCT------ACACAAGATTAATGTTGAATAATTCCTTTTC i cebCap1.NW_016107467v1 I 342 C 0 s aotNan1.NW_018502033v1 3712404 219 + 4093027 ccctttgccttatat---------------------tctac-atctaa-------------------------------------------------------------------------------------------tctctcaggtaaagcagttacctctactttcaaagtacagttaagcaaaatcctaccc--cttttcttggtcct----ccctgctatgattctggtccaacccactaaactcttttt-----------aaaatagtctccctgattcctttttgcctcctataaagccagagaaatcct------acacaagattaatgttgtataattccttttc i aotNan1.NW_018502033v1 I 910 C 0 s micMur3.chr32 1604724 236 - 9149476 ccctttatcctatat---------------------cccgc-atctaa-------------------------------------------------------------------------------------------tctgttgggtaaagctgttgcctgtacatacaaaatacagtgaaacagagtcacaccc--cttctcctagccct----aactgctatcactgtgctccagatcactcacttattttgcctggattgttagaatagtttccctgactctcttttgcttcccacaaagacagagaaatcctgttaaaacacaagatagatattatatcattcccttgc i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 585630 235 + 2414909 ccctttattgtatac---------------------cctac-atctaa-------------------------------------------------------------------------------------------tctgttgggtaaagatgttgcctgtacatacaaagtacagttaaacaga-tcctaccc--cttctcctggccct----aactgctatcactgtgctccaaaccactaacttcttttgcctggattattaaaatagtttccctgattctcttttgccacccacacaggcagagaaatcctgttaaaacacaagactgatattatatcattcccttgc i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051597 149 + 30473821 -tctttatctcacat---------------------cctacaatctaa-------------------------------------------------------------------------------------------tctatcaggtaaagctatcacctggacataccaagtacagttaaacagaatcctgccc--cctctcctgagcctttacagctgcgattattgtggtc-------------------------------------------------------------------------------------------caagATTCGTAGTATATCATTCACTTCC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16590828 249 + 58134056 tcatttatcttatatcttataccctacaacctataccctac-aaccag-------------------------------------------------------------------------------------------tctatgaggtaaagctttttttttttttttgccaataccttcaaat-------tacttggcttctcaaaaccct----tgacactaccattctgatctaagccactaacatcttttgccttgaaaattaaagcaatccccttgattccctcttgcccctcacagagccagagacatcctgttaaaacacaaa--taatgttgtatca-tcttttgc i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782640 141 - 2187301 --------------------------------------------------------------------------------------------------------------------------------------------acatcagataaagttgatgtccctatcttcaaaatacttgtaagcataatc---tac--ctattccttatact----cattg--accatcatggaataagccactaa-tgcctttgcctggattattaaaatagtctccctggtttcctcttc-------------------------------------------------------------- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e mm10.chr6 45754834 2272 - 149736546 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=864194.000000 s hg38.chrUn_KI270749v1 99979 82 + 158759 tcaaaatac--------tttaAAGAGTGCTGAtttcagttacctggatatgtgtaagacacaattccaaaacagactggc--ttaaaaa-----aat- s panTro5.chr3 201987201 82 - 202621043 tcaaaaTAA--------TTTAAAGAGTGCTGAtttcagttacctggatatgtgtaagacacaattccaaaacagactggc--ttaaaaa-----aat- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755218 82 - 205426864 tcaaaatac--------tttaAAGAGTGCTGAtttcagttacctggatatgtgtaagacacaattccaaaacagactggc--ttaaaaa-----aat- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572022 82 + 86207423 tcaaaatac--------tttaAAGAGTGCTGAtttcagttacctggatatgtgtaagacacaattccaaaacagactggc--ttaaaaa-----aat- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055058 82 + 204787373 tcaaaatac--------ttaaaagactgctgatttcaGTTCCCTGGATAtgtgtaagacacaattccaaaacagactgga--ttaaaaa-----aat- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986903 82 - 192460366 tcaaaatac--------ttaaaagactgctgatttcaGTTCCCTGGATAtgtgtaagacacaattccaaaacagactgga--ttaaaaa-----aat- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098869 82 - 17224310 tcaaaatac--------ttaaaagactgctgatttcaGTTCCCTGGATAtgtgtaagacacaattccaaaacagactgga--ttaaaaa-----aat- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411026 82 - 41321030 tcaaaatac--------ttaaaagactgctgatttcaGTTCCCTGGATAtgtgtaagacacaattccaaaacagactgga--ttaaaaa-----aat- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482490 82 - 101219884 tcaaaatac--------ttaaaagactgctgatttcaGTTCCCTGGATAtgtgtaagacacaattccaaaacagactgga--ttaaaaa-----aat- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868476 82 - 924385 tcaaaatac--------ttaaaagactgctgatttcaGTTCCCTGGATAtgtgtaagacacaattccaaaacagactgga--ttaaaaa-----aat- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710856 82 - 10587913 tcaaaatac--------ttaaaagactgctgatttcaGTTCCCTGGATAtgtgtaagacacaattccaaaacagactgga--ttaaaaa-----aat- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044699 92 - 98464013 tcaaaatactTAAAAGATTAAAAGACTACTGAtttcagtcacatagatttgtgtaagacacaattccaatacagactgcctaaaaaaaa-----tat- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716332 90 + 27742158 tcaaaatactTAAAACGTTAAAAGATTGCTGAtttcagttatctagatatatgtaagacacaattctaatacagactgcc--aaaaaaa-----aac- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 253732 90 - 4835464 TCAAAATACTTAAAAGATTAAAAGACTACTGATTTCAGTTACCTAGGTATGTGTAAGACACAATTCCAATACAGACTGCC--TAAAAAA-----TAT- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3712623 91 + 4093027 tcaaaatactTAAAAGATTAAAAGACTACTGAtttcagttacctagatatgtacaagacacaattccaatgcagactgcct-gaaaaaa-----aat- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1604960 82 - 9149476 tcaaaatac--------ttaaaaggctactgatttcagttatctagtaatgtctagcaccatattccaagacagaaaggc--ttaaaaa-----aat- i micMur3.chr32 C 0 I 5 s proCoq1.NW_012148064v1 585865 82 + 2414909 tcaaaaTGA--------TTAAAAGGCTACTGACTTAAgttatctagtaatgtctgacacaatattccaagatagagaggc--ttaaaaa-----aat- i proCoq1.NW_012148064v1 C 0 I 5 s otoGar3.GL873534 11051746 78 + 30473821 ACAAAA-AC--------TTAAAATTCTACTAATTTCAGTTACCTAAGAAAGTGTAATACAAAATGCCAAAACAG---GCT--TTAAAAA-----AGT- i otoGar3.GL873534 C 0 I 10 s canFam3.chr20 16591077 80 + 58134056 tcaaaatac--------ttaaaaggctactcatttcaatt--------atatgtaacaaataattcccaaacagtgAGAC--TTAAAAAACAATAATC i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 8368 7164 + 635616 I e eulMac1.LGHX01000499v1 8232 7164 + 631505 I e mm10.chr6 45754834 2272 - 149736546 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e dasNov3.JH563077 1782781 0 - 2187301 C a score=17290.000000 s hg38.chrUn_KI270749v1 100061 1 + 158759 a s panTro5.chr3 201987283 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755300 1 - 205426864 a i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572104 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055140 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986985 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098951 1 - 17224310 a i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411108 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482572 1 - 101219884 a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868558 1 - 924385 a i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710938 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044791 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716422 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 253822 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3712714 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1605047 1 - 9149476 a i micMur3.chr32 I 5 C 0 s proCoq1.NW_012148064v1 585952 1 + 2414909 a i proCoq1.NW_012148064v1 I 5 C 0 s eulMac1.LGHX01000499v1 15396 1 + 631505 a i eulMac1.LGHX01000499v1 I 7164 I 11 s eulFla1.LGHW01000501v1 15532 1 + 635616 a i eulFla1.LGHW01000501v1 I 7164 I 11 s canFam3.chr20 16591157 1 + 58134056 A i canFam3.chr20 C 0 C 0 e mm10.chr6 45754834 2272 - 149736546 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e otoGar3.GL873534 11051824 10 + 30473821 I e dasNov3.JH563077 1782781 0 - 2187301 C a score=85520.000000 s hg38.chrUn_KI270749v1 100062 7 + 158759 tg-tatca s panTro5.chr3 201987284 7 - 202621043 tg-tatca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755301 7 - 205426864 tg-tatca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572105 8 + 86207423 tgttatta i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055141 7 + 204787373 tg-tatta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986986 7 - 192460366 tg-tatta i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098952 7 - 17224310 tg-tatta i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411109 7 - 41321030 tg-tatta i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482573 7 - 101219884 tg-tatta i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868559 7 - 924385 tg-tatta i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710939 7 - 10587913 tg-tatta i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044792 7 - 98464013 tg-tatta i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716423 7 + 27742158 tg-tatta i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 253823 7 - 4835464 TG-TATTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3712715 7 + 4093027 tg-tatta i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1605048 7 - 9149476 tg-tatta i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 585953 7 + 2414909 tg-tatta i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051834 7 + 30473821 TA-AATCA i otoGar3.GL873534 I 10 C 0 s canFam3.chr20 16591158 7 + 58134056 TT-TATTA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 15533 11 + 635616 I e eulMac1.LGHX01000499v1 15397 11 + 631505 I e mm10.chr6 45754834 2272 - 149736546 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e dasNov3.JH563077 1782781 0 - 2187301 C a score=6760.000000 s hg38.chrUn_KI270749v1 100069 1 + 158759 c s panTro5.chr3 201987291 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755308 1 - 205426864 c i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572113 1 + 86207423 c i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055148 1 + 204787373 c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986993 1 - 192460366 c i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098959 1 - 17224310 c i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411116 1 - 41321030 c i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482580 1 - 101219884 c i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868566 1 - 924385 c i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710946 1 - 10587913 c i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044799 1 - 98464013 c i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716430 1 + 27742158 c i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 253830 1 - 4835464 C i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3712722 1 + 4093027 t i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1605055 1 - 9149476 a i micMur3.chr32 C 0 I 1 s proCoq1.NW_012148064v1 585960 1 + 2414909 t i proCoq1.NW_012148064v1 C 0 I 1 s eulMac1.LGHX01000499v1 15408 1 + 631505 t i eulMac1.LGHX01000499v1 I 11 I 100 s eulFla1.LGHW01000501v1 15544 1 + 635616 t i eulFla1.LGHW01000501v1 I 11 I 100 s otoGar3.GL873534 11051841 1 + 30473821 T i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16591165 1 + 58134056 C i canFam3.chr20 C 0 C 0 e mm10.chr6 45754834 2272 - 149736546 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e dasNov3.JH563077 1782781 0 - 2187301 C a score=835441.000000 s hg38.chrUn_KI270749v1 100070 73 + 158759 tccg-ctcaaggtcctgggaaccaactagactcagctgggttgttttggtttgggatctgtcatgtgattgtag s panTro5.chr3 201987292 73 - 202621043 tctg-ctcaaggtcctgggaaccaactagactcagctgggttgttttggtttgggatctgtcatgtgattgtag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755309 73 - 205426864 tcca-ctcaaggtcctgggaaccaactagactcagctgggttgttttggtttgggatctgtcatgtgattgtag i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572114 73 + 86207423 tccc-ctcaaggtcctgggaaccaactagactcagctgggttgttttggtttgggatctgtcatgtgattgtag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055149 74 + 204787373 tccctctcaaggtcctgggaatcaactaggctcagctggattgttttggttcaggatctgtcatgtgactgtag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60986994 74 - 192460366 tccctctcaaggtcctgggaatcaactaggctcagctggattgttttggttcaggatctgtcatgtgactgtag i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11098960 74 - 17224310 tccctctcaaggtcctgggaatcaactaggctcagctggattgttttggttcaggatctgtcatgtgactgtag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411117 74 - 41321030 tccctctcaaggtcctgggaatcaactaggctcagctggatacttttggttcaggatctgtcatgttactgtag i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482581 74 - 101219884 tccctctcaaggtcctgggaatcaactaggctcagctggattgttttggtttgggatctgtcatgtgactgtag i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868567 74 - 924385 tccctctcaaggtcctgggaatcaactaggctcagctggattgttttggttcaggatctgtcatgtgactgtag i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6710947 74 - 10587913 tccctttcaaggtcctgggaatcaactaggctcagctggattattttggtttgggatctgtcatgtgactgtag i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044800 74 - 98464013 tcactctcagggtcctgggaaccaacttgactcagctgggttggtttggtttgggatctgtcatgtgattatag i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716431 74 + 27742158 tccctttcaaggtcctgggaaccaactggactcagatgggttggtttggtttaggatctgtcatgtgattgtag i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 253831 74 - 4835464 TCCCTCTCAAGGTCCTGGGAACCAACTGGACTCAGATGGGTTGGTTTGGTTTGGGATCTGTAATGTGATTATAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3712723 74 + 4093027 tccctctcaaggtcctgggaaccaactggactcagctgggttggtttggtttgggatctgtcatgtgattgtag i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1605057 73 - 9149476 -ccccatcaaggtcctgggaacctactaggctcagccaggttgttttgttttggggtctctcatgtgattgtag i micMur3.chr32 I 1 I 1059 s proCoq1.NW_012148064v1 585962 73 + 2414909 -tcccttcgagatcttgggaaactactaggctcagctaggttcttcggttttggggtctctcgtgtgactgtag i proCoq1.NW_012148064v1 I 1 C 0 s otoGar3.GL873534 11051843 71 + 30473821 -CCCCATTAAAGTCCT--GAACCTACTGGGCCCAGCTAGGTTGCTTTGTTTGGGGGCCTCTCACGTGATTGTGG i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16591166 59 + 58134056 TGCTTCTCAACATCATGGGAAACA--------------GGTTGTTTTGTCTTGGGAATTCCCATATGA-TGCAG i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 15545 100 + 635616 I e eulMac1.LGHX01000499v1 15409 100 + 631505 I e mm10.chr6 45754834 2272 - 149736546 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e dasNov3.JH563077 1782781 0 - 2187301 C a score=37698.000000 s hg38.chrUn_KI270749v1 100143 3 + 158759 tca s panTro5.chr3 201987365 3 - 202621043 tca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755382 3 - 205426864 tca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572187 3 + 86207423 tca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055223 3 + 204787373 tca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987068 3 - 192460366 tca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099034 3 - 17224310 tca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411191 3 - 41321030 tca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482655 3 - 101219884 tca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868641 3 - 924385 tca i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711021 3 - 10587913 tca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044874 3 - 98464013 tca i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716505 3 + 27742158 tca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 253905 3 - 4835464 TCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3712797 3 + 4093027 tca i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586035 3 + 2414909 gca i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051914 3 + 30473821 TCA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16591225 3 + 58134056 CCA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 15545 100 + 635616 I e eulMac1.LGHX01000499v1 15409 100 + 631505 I e mm10.chr6 45754834 2272 - 149736546 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e dasNov3.JH563077 1782781 0 - 2187301 C a score=303154.000000 s hg38.chrUn_KI270749v1 100146 25 + 158759 gatggaggttgaggctgaggtcatc s panTro5.chr3 201987368 25 - 202621043 gatggaggttgaggctgaagtcatc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755385 25 - 205426864 gatggaggttgaggctgaagtcatc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572190 25 + 86207423 catggaggttgaggctgaagtcatc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055226 25 + 204787373 gatggaggtcgaggctgaagtcatc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987071 25 - 192460366 gatggaggtcgaggctgaagtcatc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099037 25 - 17224310 gatggaggtcgaggctgaagtcatc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411194 25 - 41321030 gatggaggtcgaggctgaagtcatc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482658 25 - 101219884 gatggaggtcgaggctgaagtcatc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868644 25 - 924385 gatggaggtcgaggctgaagtcatc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711024 25 - 10587913 gatggaggtcgaggctgaagtcatc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044877 25 - 98464013 gatggaggttgagactgaagtcatc i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716508 25 + 27742158 aatggaggttgaggctgaaggcatc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 253908 25 - 4835464 GATGGAGGTTgaggccgaagtcatc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3712800 25 + 4093027 gatggaggttgaggctgaagtcatc i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586038 25 + 2414909 gatggaggctggggctgaagtcatc i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11051917 24 + 30473821 GATGGAggct-gtgctggagtcact i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16591228 24 + 58134056 GAT-gaggttggaactcatgtcacc i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782781 17 - 2187301 GATgg--------gctgaagtcatt i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 15545 100 + 635616 I e eulMac1.LGHX01000499v1 15409 100 + 631505 I e mm10.chr6 45754834 2272 - 149736546 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=1111360.000000 s hg38.chrUn_KI270749v1 100171 79 + 158759 tttatgccttccacaatcacaggttt-------------tcatgacacaactacgtgaaggctggaacaattgggatttatctggcatctcc s panTro5.chr3 201987393 79 - 202621043 tttatgccttccacaatcacaggttt-------------gcatgacacaactacgtgaaggctggaacagctgggatttatctggcatctcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755410 79 - 205426864 tttatgccttccacaatcacaggttt-------------gcatgacacaactatgtgaaggctggaacagctgggatttatctggcatctcc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572215 92 + 86207423 tttatgccttccacaatcacaggtttggtgcctgagctggcatgacacaactacgtgaaggctggaacagctgggatttatctggcatctcc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055251 92 + 204787373 ttgatgtcttccacaatcacaggtttggtgcctgagctggcatgacacaactacgtgaaagttggaacagctgggatttatctggcatctcc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987096 92 - 192460366 ttgatgtcttctacaatcacaggtttggtgcctgagctggcatgacacaactacgtgaaagttggaacagctgggatttatctggcatctcc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099062 92 - 17224310 ttgatgtcttccacaatcacaggtttggtgcctgagctggcatgacacaactacgtgaaagttggaacagctgggatttatctggcatctcc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411219 92 - 41321030 ttgatgtcttccacaatcacaggtttggtgcctgagctggcatgacacaactacgtgaaagttggaacagctgggatttatctggcatctcc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482683 92 - 101219884 ttgatgtcttccacaatcacaggtttgatgcctggactggcatgacacaactacgtgaaggttggaacaactgggatttatctggcatctcc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868669 92 - 924385 ctgatgtcttccacaatcacaggtttggtgcctgagctggcatgacacaactaggtgaaagttggaacagctgggatttatctggcatctcc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711049 92 - 10587913 ttgatgtcttccacaatcacaggtttggtgcctgagctggcatgacacaactacgtgaaagttgaaacagctgggttttatttggcatctcc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044902 89 - 98464013 tt--tgcctttcacaatcacaggtttggtgcctgagctagcatagtacaactacgtgaaggctg-aacatctgggatttatctggcatctcc i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27716533 89 + 27742158 tt--tgcctttcacaatcacaggtttggtgcctgagctggcataatacaactatgtgaaagctg-aacatctggaatttatctggcatctcc i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 253933 89 - 4835464 tt--tgcctttcacaatcacaggtttggtgcctgagctggcataatacaactatgtgaaggctg-aacatctgggatttatctggcatctcc i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3712825 89 + 4093027 tt--tgcctttcacaatcacaggtttggtacctgagctgccctgatacaactatgtgaaggctg-aacatctgggatttatctggcatctcc i aotNan1.NW_018502033v1 C 0 I 1 s proCoq1.NW_012148064v1 586063 91 + 2414909 atgaagccttccttgctcacgggtttggtgcctgagct-gcatgacacaaatactcaaaggctggaacagctgggattcttccagcgtctcc i proCoq1.NW_012148064v1 C 0 I 136 s eulMac1.LGHX01000499v1 15509 92 + 631505 ctgaagccttccttgctcacgggtttggtgcctgagctggcatgacacaaatacctggaggctggaacagctggggttcttccagcatctcc i eulMac1.LGHX01000499v1 I 100 C 0 s eulFla1.LGHW01000501v1 15645 92 + 635616 ctgaagccttccttgctcacgggtttggtgcctgagctggcatgacacaaatacctggaggctggaacagctggggttcttccagcatctcc i eulFla1.LGHW01000501v1 I 100 C 0 s otoGar3.GL873534 11051941 82 + 30473821 gtgacaccttcctcactcaca-----gatgcctgagctggcatg-----aatgcctgcaggatggaacaactggggttcttgcagcatttcc i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16591252 91 + 58134056 ttgaagtcttcctcattcacagatctgatgcctgagctgagctaacaaaaatacctggagactggaacagctgaggctcattagaagtttc- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782798 92 - 2187301 tggaagccttcctcactcacaggtttagtgacatggctgggatgaaacaaatggctagaggcttgaacagcagaggctcctcagacatctct i dasNov3.JH563077 C 0 I 2 e mm10.chr6 45754834 2272 - 149736546 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=11422.000000 s hg38.chrUn_KI270749v1 100250 1 + 158759 t s panTro5.chr3 201987472 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755489 1 - 205426864 t i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572307 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055343 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987188 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099154 1 - 17224310 t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411311 1 - 41321030 t i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482775 1 - 101219884 t i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868761 1 - 924385 t i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711141 1 - 10587913 t i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044992 1 - 98464013 t i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27716623 1 + 27742158 t i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 254023 1 - 4835464 t i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3712915 1 + 4093027 t i aotNan1.NW_018502033v1 I 1 C 0 s eulMac1.LGHX01000499v1 15601 1 + 631505 c i eulMac1.LGHX01000499v1 C 0 I 144 s eulFla1.LGHW01000501v1 15737 1 + 635616 c i eulFla1.LGHW01000501v1 C 0 I 144 s otoGar3.GL873534 11052024 1 + 30473821 t i otoGar3.GL873534 I 1 C 0 s dasNov3.JH563077 1782892 1 - 2187301 t i dasNov3.JH563077 I 2 C 0 e proCoq1.NW_012148064v1 586154 136 + 2414909 I e mm10.chr6 45754834 2272 - 149736546 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I e canFam3.chr20 16591343 0 + 58134056 C a score=597227.000000 s hg38.chrUn_KI270749v1 100251 62 + 158759 gtcctac-ttgtgagatttttcaatgtggtttctccaa--ttcagtggcctcaaggtagccatat s panTro5.chr3 201987473 62 - 202621043 gtcctac-ttgtgagatttttcaatgtggtttctccaa--ttcagtggcctcaaggtagccatat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755490 62 - 205426864 gtcctac-ttgtgagatttttcaatgtggtttctccaa--ttcagtggcctcaaggtagccatat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572308 62 + 86207423 gtcttac-ttgtgagatttttcaatgtggtttctccaa--ttcagcggcctcaaggtggccatat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055344 62 + 204787373 gtcttac-ttgtgagatttttcaatgtgctttctccaa--ttcagcagcctcaaggtagccatat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987189 62 - 192460366 gtcttac-ttgtgagatttttcaatgtgctttctccaa--ttcagcagcctcaaggtagccatat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099155 62 - 17224310 gtcttac-ttgtgagatttttcaatgtgctttctccaa--ttcagcagcctcaaggtagccatat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411312 62 - 41321030 gtcttac-ttgtgagatttttcaatgtgctttctccaa--ttcagtagcctcaaggtagccatat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482776 62 - 101219884 gtcttac-ctgtgagatttttcaatgtactttctccaa--ttcagcggcctcaaggtagccatat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868762 62 - 924385 gtcttac-ttgtgagatttttcaatgtgctttctccaa--ttcagtagcctcaaggtagccatat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711142 62 - 10587913 gtcctac-ttgtgagatttttcagtgtgctttctccaa--ttcagcagcgtcaaggtagccatat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46044993 58 - 98464013 gcctt-----gtgagatttttcactgtgttttctccaa--tacaccagcctcaaaatagtcatat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716624 62 + 27742158 gccttac-tcatgagatttttcaatgtgttttctccaa--tacaccagcctcaaggtagtcatat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254024 62 - 4835464 gccttac-tcgtgagatttttcagtgtgttttctccaa--tacaccagcctcaaggtagtcatat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3712916 62 + 4093027 gccttac-ttgtgagatttttcagtgtgttttctccaa--tacaccagcctcaagatagtcatat i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11052025 64 + 30473821 gtttcac-ttaggatatctttccccacagtcgatccaaagtacaactacttcaaagtagttggac i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16591343 61 + 58134056 -tcttac-ttattagatctttccaagtggcttttctaa--tacagcgacctcgggttagtcagat i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782893 62 - 2187301 atctcacatcatgagagctttccttctg-tctttctag--catggtagcctcagggtagtcaaat i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 15738 144 + 635616 I e eulMac1.LGHX01000499v1 15602 144 + 631505 I e proCoq1.NW_012148064v1 586154 136 + 2414909 I e mm10.chr6 45754834 2272 - 149736546 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1365552 3267 - 1467263 I e papAnu3.chr2 59543575 3273 + 187378091 I e nasLar1.chr2 57709401 8924 + 181502896 I e ponAbe2.chr3 69641134 3523 + 202140232 I e rhiBie1.NW_016820128v1 1219130 3937 - 2311269 I e tarSyr2.KE939134v1 148577 16285 + 958716 I a score=25116.000000 s hg38.chrUn_KI270749v1 100313 1 + 158759 t s panTro5.chr3 201987535 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755552 1 - 205426864 t i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69644657 1 + 202140232 t i ponAbe2.chr3 I 3523 I 1379 s nomLeu3.chr21 67572370 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055406 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987251 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099217 1 - 17224310 t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411374 1 - 41321030 t i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59546848 1 + 187378091 t i papAnu3.chr2 I 3273 I 1388 s chlSab2.chr22 64482838 1 - 101219884 t i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868824 1 - 924385 t i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57718325 1 + 181502896 t i nasLar1.chr2 I 8924 I 1387 s colAng1.NW_012114711v1 6711204 1 - 10587913 t i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1368819 1 - 1467263 t i rhiRox1.KN296641v1 I 3267 I 1387 s rhiBie1.NW_016820128v1 1223067 1 - 2311269 t i rhiBie1.NW_016820128v1 I 3937 I 1387 s calJac3.chr15 46045051 1 - 98464013 t i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716686 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254086 1 - 4835464 t i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3712978 1 + 4093027 t i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 164862 1 + 958716 t i tarSyr2.KE939134v1 I 16285 I 1325 s otoGar3.GL873534 11052089 1 + 30473821 t i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16591404 1 + 58134056 t i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782955 1 - 2187301 t i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 15738 144 + 635616 I e eulMac1.LGHX01000499v1 15602 144 + 631505 I e proCoq1.NW_012148064v1 586154 136 + 2414909 I e mm10.chr6 45754834 2272 - 149736546 I e micMur3.chr32 1605130 1059 - 9149476 I a score=654848.000000 s hg38.chrUn_KI270749v1 100314 69 + 158759 acttacatggtagttggttttctctagagggaggatacaaagaaaac--ggtggaagttgtatg---ctttttt s panTro5.chr3 201987536 69 - 202621043 acttacatggtagttggttttctctagagggaggatacaaagaaaac--agtggaagttgtatt---ttttttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755553 69 - 205426864 acttacatggtagttggttttctctagagggaggacacaaagaaaac--agtggaagttgtatg---ctttttt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572371 69 + 86207423 acttatatggtagttggttttctctagagggaggatacaaagaaaac--agtggaagttgtatg---ctttttt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055407 68 + 204787373 acttatatggtagttggttttctctagagggaggaaacaaagaaaac--agtggaagttgtatg----tttttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987252 68 - 192460366 acttatatggtagttggttttctctagagggaggaaacaaagaaaac--agtggaagttgtatg----tttttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099218 68 - 17224310 acttatacggtagttggttttctctagagggaggaaacaaagaaaac--agtggaagttgtatg----tttttt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411375 68 - 41321030 acttatatggtagttggttttctctagagggaggatacaaagaaaac--agtggaagttgtatg----tttttt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482839 68 - 101219884 acttatatggtagttgattttctctagagggaggatacaaagaaaac--ggtagaagttgtatg----tttttt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868825 68 - 924385 acttatatggtagttggttttctctggagggaggatacaaagaaaac--agtggaagttgtatg----tttttt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711205 68 - 10587913 acttgtaaggtagttggttttctctagagggaggatacaaagaaaac--agtggaagttgtacg----cttttt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045052 68 - 98464013 acttatatggttgctgaatttctctaaagggaagataccaagcaaac--agtggaagttgtctg----cctttt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716687 68 + 27742158 acttatatggtagctgaatttctctaaagggaggataccaagcaaac--agtggaagttgtatg----cctttt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254087 68 - 4835464 acttatatggtagctgaatttctctaaagggaggataccaagcaaac--agtggaagctgtatg----cctttt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3712979 68 + 4093027 acttatatagtagctgaatttctctaaagggaggataccaagctaac--agtggaagttgtatg----cctttt i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11052090 68 + 30473821 cctcccctggtagttggctgtctatagagtgaggttcccaagagaac--attgaaagttgcata----cccttt i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16591405 68 + 58134056 tcttacatggcagttggctttctctaccatgtagttcccaagagaat--ggtggaagttgcatg----actttt i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1782956 71 - 2187301 tctaatgtggtagttgg--ttacctagtgtgaagatcccaacagaatcaagtggaagttttattaaaacgttt- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 15738 144 + 635616 I e eulMac1.LGHX01000499v1 15602 144 + 631505 I e proCoq1.NW_012148064v1 586154 136 + 2414909 I e mm10.chr6 45754834 2272 - 149736546 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I a score=1323594.000000 s hg38.chrUn_KI270749v1 100383 106 + 158759 attaactagccttagaagttgcatagcatcatttctaccatagtacatgtgtagaagaagtcataagtccagccaaaatgaagtcaagatgtagagacacctctca s panTro5.chr3 201987605 106 - 202621043 attaactagccttagaggtcacatagcatcatttctaccatagtacatgtgtagaagaagtcataagtccagccaaaatgaaggcaagatgtagagacacctctca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755622 106 - 205426864 attaactagccttagaggtcgcatagcatcatttctaccatagtacatgtgtagaagaagtcataagtccagccaaaatgaaggcaagatgtagagacacctctca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572440 106 + 86207423 attaactagccttagaggtcacataggatcattttcaccctagtacatgcgtaaaaggagaggtaagtccagccaaaatgaaggcaagatgtagagacacctctca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055475 106 + 204787373 attaactagccttagaggtcgcgtagcatcatttctaccatagtacatgtgtaaaagaagtcataagtccagccaaaatgaaggcaagatgtagagacacctctca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987320 106 - 192460366 attaactagccttagaggtcgtgtagcatcatttctaccatagtacatgtgtaaaagaagtcataagtccagccaaaatgaaggcaagatgtagagacacctctca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099286 106 - 17224310 attaactagccttagaggtcacgtagcatcatttctaccatagtacatgtgtaaaagaagtcataagtccagccaaaatgaaggcaagatgtagagacacctctca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411443 106 - 41321030 attaactagccttagaggtcacgtagcatcatttctaccatagtacatgtgtaaaagaagtcataagtccagccaaaatgaaggcaagatgtagagacacctctca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64482907 106 - 101219884 attaactagcctcagaggtcacatagcatcatttctaccatagtacatgtgtaaaagaagtcataagtccagccaaaatgaaggcaagatgtagagacacctctca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868893 106 - 924385 attaactagccttagaggtcatgtagcatcatttctaccatagtacatgtgtaaaagaagtcataagtccagccaaaatgaaggcaagatgtagagacacctctca i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711273 106 - 10587913 attaactagccttagaggtaacatagcatcatttctaccatagtacatgtgtaaaagaagtcataagtccagccaaaatgaaggcaagatgtagagacaccactca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045120 93 - 98464013 -tgaactagcct-----------tagcatcatttctaccatattacatgtgtcaga-aagtcataagacaagccaaaatgaaggcaagatgtacagccacctctca i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716755 94 + 27742158 atgaactagcct-----------tagcatcatttctaccatattacatgtgtcaga-aagtcataaaacaagccaaagtgaaagcaagatgtacagccacctctca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254155 94 - 4835464 atgaactagcct-----------tagcatcatttctaccatattacatgtgtcaga-aagtcataagacaagctaaagtgaaggcaagatgtacagccacctctca i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713047 94 + 4093027 atgaactagcct-----------tagcatcatttctaccatattacatgtgtcaga-aagtcataagacaagccaaaatgaaggtaagatgtacagctacctctca i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586290 106 + 2414909 atgaactagccttagaagtcacatagcgtcatttccaacatactacattcgtcagagaagtcagaagcccagccaaattcaaggcaagatggaaagtcgcctctga i proCoq1.NW_012148064v1 I 136 C 0 s eulMac1.LGHX01000499v1 15746 106 + 631505 atgaactagccttggaagtcacatagcatcattttcaacatactacattcgtcagagaagtcagaagcccagccaaattcaaggcaagatggagattcgcctctca i eulMac1.LGHX01000499v1 I 144 C 0 s eulFla1.LGHW01000501v1 15882 106 + 635616 atgaactagccttggaagtcacatagcatcattttcaacatactacattcgtcagagaagtcagaagcccagccaaattcaaggcaagatggagattcgcctctca i eulFla1.LGHW01000501v1 I 144 C 0 s otoGar3.GL873534 11052158 106 + 30473821 atgatctagcattgaaagtcacacagcatcatttccaatatattacatttgccaaagacaccagaagcccaaccaagttcatggcaagatggagagtgtcctttca i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16591473 106 + 58134056 gtgacttagtttcagaagtgacacagcatcattcccaccaaattgcattgatcgaagaagacagaagtccggccaagttcagagtgagatggagcgccatccctcA i canFam3.chr20 C 0 I 13 s dasNov3.JH563077 1783027 99 - 2187301 atgaactagccttggaagttacatagcatcatttctaccatattctcttggtcaaagaagtcagaggggcagatatattca----aatacatgaagcctctcc--- i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45754834 2272 - 149736546 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I a score=1892266.000000 s hg38.chrUn_KI270749v1 100489 158 + 158759 atgggaagaaatctaaagaatatgccacag-ttttttaaaactaccCTACACTTcatctcaattaaagcaaaagccaaaattttctcaatggtctgcaaTGGGAAA-TTGTAGcaaatttgaccactgcttg-c--------tttttaaaatcaagttggattagaaca s panTro5.chr3 201987711 159 - 202621043 atgggaagaaatctaaagaatatgccacggtttttttaaaactaccCTACACTTcatctcaattaaagcaaaagccaaaattttctcaatggtctgcaaggGGAAA-TTGTAGcaaatttgaccactgcttg-c--------tttttaaaatcaagttggattagaaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755728 159 - 205426864 atgggaagaaatctaaagaatatgccacagtttttttaaaactaccCTACACTTcatctcaattaaagcaaaagccaaaattttctcaatggtctgcaaTGGGAAA-TTGTAGcaaatttgaccactgcttg-c--------tttttaaaatcaagttggattagaaca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572546 159 + 86207423 atgggaagaaatctaaagaacatgtggcagtttttttaaaactaccCTACACTTcatctcaattaaagcaaaagccaaaattttctcaatgatctgcaaTGGAAAA-TTGTAGcaaatttgaccactgcttg-c--------tttttaaaatcaagttggattagaaca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055581 158 + 204787373 atgggaagaatgctaaagaatacatggcag-ttttttaaaactaccCTActcttcatctcagttaaagcaaaagccaaaattttatcaatggtctgcaaTGGGAAA-TTGTAGCAAATCTGACCACTGCTTG-C--------TTTTAAAAATCAAGTTGGATTACAACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987426 158 - 192460366 atgggaagaatgctaaagaatacatggcag-ttttttaaaactaccCTActcttcatctcagttaaagcaaaagccaaaattttatcaatggtctgcaaTGGGAAA-TTGTAGcaaatctgaccactgcttg-c--------ttttaaaaatcaagttggattacaaca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099392 158 - 17224310 atgggaagaatgctaaagaatacatggcag-ttttttaaaactaccCTActcttcatctcagttaaagcaaaagccaaaattttatcaatggtctgcaaTGGGAAA-TTGTAGCAAATCTGACCACTGCTTG-C--------TTTTAAaaatcaagttggattacaaca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411549 158 - 41321030 atgggaagaatgctaaagaatacatggcag-ttttttaaaactaccCTActcttcatctcagttaaagcaaaagccaaaattttatcaatggtctgcaaTGGGAAA-TTGTAGCAAATTTGACCACTGCTTG-C--------TTTTAAaaatcaagttggattacaaca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483013 158 - 101219884 atgggaagaatgctaaagaatacatggaag-ttttttaaaaCTACCCTActcttcatctcagttaaagcaaaagccaaaattttatcaatgctctgcaaTGGGAAA-TTGTAGcaaatttgaccactgcttg-c--------ttttaaaaatcaagttggattacaaca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 868999 158 - 924385 atgggaagaatgctaaagaatacatggcag-ttttttaaaactaccCTActcttcatctcagttaaagcaaaagccaaaattttatcaatggtctgcaaTGGGAAA-TTGTAGCAAATTTGACCACTGCTTG-C--------TTTTAAaaatcaagttggattacaaca i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711379 158 - 10587913 atgggaagaatgctaaagaatacatggaag-ttttttaaaaCTACCCTACTcttcctctcagttaaagtaaaagccaaaattttatcaatggtctgcaaTAGGAAA-TTGTAGCAAATTTGACCACTGCTTG-C--------TTTTAAaaatcaagttggattagaaca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045213 160 - 98464013 atgggaagaatgctaaagattacatggcag-ttttttaaaaCTATCCAActcttcatctcaattaaagcaaaagccaaaattttctccatggtctgcaaTGGGAAATTTGTAGcaaatttgaccattgcttg-c-------tctttttgaatcaagttggattagaaca i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27716849 166 + 27742158 atgggaagaatgctaaatattacatggcag-ttttttaaaactaccCAActcttcatctcaattaaagcaaaagccaaaattttctccatggtctgcaaTGAGAAA-TTGTAGCAAATTTGACCATTGCTTG-CTTTTTTTtttttttgaatcaagttggattagaaca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254249 159 - 4835464 atgggaagaatgctaaagattacatggcag-ttttttaaaactaccCAACTCTTCATCTCAATTAAAGCAATAGCCAAAATTTTCTCCATGGTCTGCAATGGGAAA-TTGTTGcaaatttgaccattgcttg-c-------tttttctgaatcaagttggattagaaca i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713141 159 + 4093027 atgggaagaatgctaaagattacatggcag-ttttttaaaaCTACCCAActcttcatctcaattaaagcaaaagccaaaattttctccatggtctgcaaTGAGAAA-TTGTAGcaaatttgaccattgcttg-c-------tttttttgaatcaagttggattagaaca i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586396 154 + 2414909 gtggaaagaatatcaaagaatatgtggcaa-tttttaaaaattgtcaAACTATTcatatcaattaaagtaaaagccaaaattttcccagtggtctacCATGGAGTG-----AGcaaatttgaccagggcctg-c--------tttttcaaatcaagttatattagaaca i proCoq1.NW_012148064v1 C 0 I 2 s eulMac1.LGHX01000499v1 15852 149 + 631505 gtggaaagaatatcaaagaatatgtggcaa-tttttaaaaactgccaAACTATTCATCTCAATTAAGG-----GCCAAAATGTTCCCAGTGGTCTACCATGGAACT-----AGTAGatttggccagtgcctg-c--------tttatcaaatcaagttatattagtaca i eulMac1.LGHX01000499v1 C 0 I 167 s eulFla1.LGHW01000501v1 15988 149 + 635616 gtggaaagaatatcaaagaatatgtggcaa-tttttaaaaactgccaAACTATTCATCTCAATTAAGG-----GCCAAAATGTTCCCAGTGGTCTACCATGGAACT-----AGTAGatttggccagtgcctg-c--------tttatcaaatcaagttatattagtaca i eulFla1.LGHW01000501v1 C 0 I 228 s otoGar3.GL873534 11052264 150 + 30473821 aaggaaagaatgtctaagagtacgtggcaa-tttttttaaactgccaAACTACTCATCTCAATTAAAA-----GCCAAAATTTTCCTGATGGTCTACAATGGAATG-----AGcaaatttgaccagtgcctgtt--------tttttcaaatcaaattatattagaaca i otoGar3.GL873534 C 0 I 2 s dasNov3.JH563077 1783126 145 - 2187301 aaggaagaaatgtcaaagaatgtgtgacaa-tttttttaaa-TAGTCAGCAATT-ATctca---aagttaatagccaaaatttttccagtggtctacagaagggtc-----tgcaAATTTgcccactg-----t--------ttttgcaaaaagagttttattagaaca i dasNov3.JH563077 C 0 I 2 e mm10.chr6 45754834 2272 - 149736546 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I e canFam3.chr20 16591579 13 + 58134056 I a score=195399.000000 s hg38.chrUn_KI270749v1 100647 25 + 158759 gtcacatgtattggtttacata----cat s panTro5.chr3 201987870 25 - 202621043 gtcacatgtattggtttacata----caa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755887 25 - 205426864 gtcacatgtattggtttacata----caa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572705 25 + 86207423 gtcacatttattggtttacata----caa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055739 25 + 204787373 GTCACATTTGTTGGTTTACATA----CAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987584 25 - 192460366 gtcacatttgttggtttacata----caa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099550 25 - 17224310 gtcacatttgttggtttacata----caa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411707 25 - 41321030 gtcacatttgttggtttacata----caa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483171 25 - 101219884 gccacatttgttggtttacata----caa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869157 25 - 924385 gtcacatttgttggtttacata----caa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711537 25 - 10587913 gtcgtatttgttggtttacata----caa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045373 25 - 98464013 gtggcatttattagttcccata----cta i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717015 25 + 27742158 gtggcatttattagtttgcata----cta i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254408 25 - 4835464 gtgacatttattagtttccata----cta i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713300 25 + 4093027 gtggcatttattagttcccata----cta i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586552 29 + 2414909 gtcacattcatttgtttacttactgtctg i proCoq1.NW_012148064v1 I 2 C 0 s otoGar3.GL873534 11052416 29 + 30473821 gtcccattcatttattaactttctgtcta i otoGar3.GL873534 I 2 C 0 s dasNov3.JH563077 1783273 23 - 2187301 atctctttcattagatcatgta----t-- i dasNov3.JH563077 I 2 C 0 e eulFla1.LGHW01000501v1 16137 228 + 635616 I e eulMac1.LGHX01000499v1 16001 167 + 631505 I e mm10.chr6 45754834 2272 - 149736546 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I e canFam3.chr20 16591579 13 + 58134056 I a score=153358.000000 s hg38.chrUn_KI270749v1 100672 15 + 158759 ------tgatggcttttgtat s panTro5.chr3 201987895 15 - 202621043 ------tgatggcttttgtat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755912 15 - 205426864 ------tgatggcttttgtat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572730 15 + 86207423 ------tgatggcttttgtat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055764 15 + 204787373 ------TAATGTGCTTTGTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987609 15 - 192460366 ------tgatgtcttttgtat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099575 15 - 17224310 ------tgatgtcttttgtat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411732 15 - 41321030 ------tgatgtcttttgtat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483196 15 - 101219884 ------tgatgtcttttgtat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869182 15 - 924385 ------tgatgtcttttgtat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711562 15 - 10587913 ------tgatgtcttttgtat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045398 15 - 98464013 ------tgatggcttttgtat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717040 15 + 27742158 ------tgatggcttttgtat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254433 15 - 4835464 ------tgatggcttttgtat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713325 15 + 4093027 ------tgatggcttttgtat i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586581 15 + 2414909 ------tgattgctttttcac i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11052445 15 + 30473821 ------tgattgtttatccac i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16591592 15 + 58134056 ------TCATGACTTTTGTAG i canFam3.chr20 I 13 C 0 s dasNov3.JH563077 1783296 21 - 2187301 tgtctatggctaatttcacac i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 16137 228 + 635616 I e eulMac1.LGHX01000499v1 16001 167 + 631505 I e mm10.chr6 45754834 2272 - 149736546 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I a score=78960.000000 s hg38.chrUn_KI270749v1 100687 6 + 158759 tataat s panTro5.chr3 201987910 6 - 202621043 tataat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755927 6 - 205426864 tataat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572745 6 + 86207423 tataat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055779 6 + 204787373 TATAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987624 6 - 192460366 tataac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099590 6 - 17224310 tataat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411747 6 - 41321030 tataat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483211 6 - 101219884 tataat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869197 6 - 924385 tataat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711577 6 - 10587913 tataat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045413 6 - 98464013 tataat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717055 6 + 27742158 tataat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254448 6 - 4835464 tataat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713340 6 + 4093027 tataat i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586596 6 + 2414909 tacaat i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11052460 6 + 30473821 tgcagt i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45757106 6 - 149736546 TGTGAC i mm10.chr6 I 2272 C 0 s canFam3.chr20 16591607 6 + 58134056 TGCAAT i canFam3.chr20 C 0 I 12 s dasNov3.JH563077 1783317 6 - 2187301 tgtaat i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 16137 228 + 635616 I e eulMac1.LGHX01000499v1 16001 167 + 631505 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I a score=1137510.000000 s hg38.chrUn_KI270749v1 100693 119 + 158759 gccaaagttgagtagttgtga-cagagataatgtggcc-tgcaaagctgaacctgtttataatctggccccttagaaggcaagtttactaacccctgGT-CTGCA----GTTTTGAACACACACAC s panTro5.chr3 201987916 119 - 202621043 gccaaagttgagtagttgtga-cagagatgatgtggcc-tgcaaagctgaacctgtttataatctggtcccttagaaggcaagtttactaacccctgGT-CTGCA----GTTTTGAACACACACAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204755933 119 - 205426864 gccgaagttgagtagttgtga-cagagatcatgtggcc-tgcaaagttgaacctgtttataatctggccccttagaaggcaagtttactaacccctgGT-CTGCA----GTTTTGAACACACACAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572751 119 + 86207423 gccaaagttgagtagttgtga-cagagataatgtggcc-tgcaaagctgaacctgcttataatctggccctttagaagacaagtttactaacccctgGT-CTACA----GCCTTGAACACacacac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055785 119 + 204787373 GCCaaaggtgagtccttgtga-cagagacagtgtggcc-tgcaaagctgaacctgtttataatctggctctttaggagacaagtttactaacccctgGT-CTGCA----GTCTTGCACACACACAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987630 119 - 192460366 gccaaaggtgagtcgttgtga-cagagacagtgtggcc-tgcaaagctgaacctgtttataatctggctctttaggagacaagtttactaacccctgGT-CTGCA----GTCTTGCACAcacacat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099596 119 - 17224310 gccaaaggtgagtccttgtga-cagagacagtgtggcc-tgcaaagctgaacctgtttataatctggctctttaggagacaagtttactaacccctgGT-CTGCA----GTCTTGCACACACACAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411753 119 - 41321030 gccaaaggtgagtcgttgtga-cagagacagtgtggcc-tacaaagctgaacgtgtttataatctggctctttaggagacaagtttactaacccctgGT-CTGCA----GTCTTGCACACACACAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483217 119 - 101219884 gccaacggtgagtccttgtga-cagagacagtgtggcc-tgcaaagctgaatctgtttataatctggctctttaggagacaagtttactaacccctgGT-CTGCA----GTCTTGCACAcacacat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869203 119 - 924385 gccaaaggtgagtcgttgtga-cagagacagtgtggcc-tacaaagctgaacgtgtttataatctggctctttaggagacaagtttactaacccctgGT-CTGCA----GTCTTGCACACACACAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711583 119 - 10587913 gccaaaggggagtcgttgtga-cagagacagtgtggcC-TGCAAAGCTGAACCTGTTTATAATCTGGCTCTTTAGGAGACAAGTTTActaacccctggt-ctgca----gtcttgcacacacaccc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045419 115 - 98464013 accaaagttgagtagttgtga-cagagagagtctggcc-tgcaaagctgaacctgtttataacctgaccttttagaagataagtttactaatccctgCT-CTGCA----GTGTTGAACACA----T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717061 115 + 27742158 cccaaagttgagtcgttgtga-cagagatagtctggcc-tgcaaagctgaacctgtttataatctgaccttttagaagataagtttactgacgcctgCT-CTGCA----GTATTGAACACA----T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254454 115 - 4835464 cccaaaattgagtagttgtga-cagagatagtctggcc-tgcaaagctgaacctgtttataatctgaccttttagaatataagtttactaacccctgCT-CTGCA----GTATTGAACACA----T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713346 112 + 4093027 cccaaagttgagta---gtga-cagagataatctggca-tgcaaagttgaacctgtttataatctgaccttttagaagataagtttactaatccccgCT-CTGCG----GTATTGAACACA----T i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586602 115 + 2414909 gccagagttgagtaactgtgg-cagagatagtgtgggc-cacaaagctgaaagtgttcacaaattgaccctttagagaacaagtttgctgactcctggt-ctgca----atactcaacacaa---- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11052466 119 + 30473821 gccagagtcgagtagttgaga-gggagatagtgtggtc-cccaaaactgaaactagttacaatttagctctttagaaaataactttgttgactcctgGT-CTGCACCACCTGCTCAacacca---- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45757112 122 - 149736546 TCTAGAGTTAAGTATACAGGAGTGGAAAAAATATGGCTGTTAAAAATTCAATTTTTTAAAAATATGTCTCTTAGGTACACAACTGTAATGCTCTTCAATCCTCCA----ATATCTGACATCTGTTT i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1783323 110 - 2187301 gccaaaactgagtcatttt---cagagactgtatagcc-tgcaaaactgaaattatt-actatctg-tcctttacagaaaaagtttactgacccctgGC-TGATA----ATATC-AACACAG---- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 16137 228 + 635616 I e eulMac1.LGHX01000499v1 16001 167 + 631505 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I e canFam3.chr20 16591613 12 + 58134056 I a score=255881.000000 s hg38.chrUn_KI270749v1 100812 25 + 158759 Cctgctcccctatttgctctgtg-aa s panTro5.chr3 201988035 25 - 202621043 Cctgctcccctatttgctctctg-aa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756052 25 - 205426864 Cctgctcccctatttgctctctg-aa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572870 25 + 86207423 tctgctcccctatttgctctctg-aa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055904 26 + 204787373 Cctgctcccctatttgctctctgaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987749 26 - 192460366 cctgctcccctatttgctctctgaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099715 26 - 17224310 Cctgctcccctatttgctctctgaaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411872 26 - 41321030 Cctgctcccctatttgctctctgaaa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483336 25 - 101219884 cctgctcccctatttgctctctg-aa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869322 26 - 924385 Cctgctcccctatttgctctctgaaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711702 25 - 10587913 cttgctcccctatttgctctctg-aa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045534 25 - 98464013 Cctgctcctccatttgctctgtg-aa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717176 25 + 27742158 Cctgctcctctatttgctctgtg-aa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254569 25 - 4835464 Cctgctcctctatttgctctgtg-aa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713458 25 + 4093027 Cctgctcctctatttgctctgtg-aa i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586717 23 + 2414909 cctgcccccttgtttccgc--cg-aa i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 16168 23 + 631505 cctgcccctctgtttcctc--tg-aa i eulMac1.LGHX01000499v1 I 167 C 0 s otoGar3.GL873534 11052585 24 + 30473821 cctgctcccctgtttcctct-ct-ga i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45757234 25 - 149736546 CTTCACAATCTATTTTCTTTCAG-AG i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1783433 25 - 2187301 TATGAAAccctgtttcctttcca-ac i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 16137 228 + 635616 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I e canFam3.chr20 16591613 12 + 58134056 I a score=355362.000000 s hg38.chrUn_KI270749v1 100837 30 + 158759 ttcatctctctagtactctgttcctcact-g s panTro5.chr3 201988060 30 - 202621043 tttatatctctagtactctgttcctcact-g i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756077 30 - 205426864 ttcatctctctagtactctgttcctcgct-g i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572895 30 + 86207423 ttcatctctctagtactctgttcctcact-g i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055930 30 + 204787373 ttcatctctctaatactctgttcctcact-g i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987775 30 - 192460366 ttcatctctctaatactctgttcctcact-g i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099741 30 - 17224310 ttcatctctctaatactctgttcctcact-g i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411898 30 - 41321030 ttcatctctctaatactctgttcctcact-g i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483361 30 - 101219884 ttaatctctctaatactgtgttcctcact-g i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869348 30 - 924385 ttcatctctctaatactctgttcctcact-g i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711727 30 - 10587913 ttcatctctctaatactctgttcctcact-g i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045559 29 - 98464013 ttcatctctctagta--ctgtttgtcactgg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717201 31 + 27742158 ttcatctctctagtcctctgttcatcactgg i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254594 31 - 4835464 ttcatctctctagtactctgttcatcaccgg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713483 31 + 4093027 ttcatctctctagtactctgttcatcactgg i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586740 28 + 2414909 tcca--tctctagtactctcctcctcacg-g i proCoq1.NW_012148064v1 C 0 I 10 s eulMac1.LGHX01000499v1 16191 28 + 631505 tcca--tctccagtactcttctcctcact-g i eulMac1.LGHX01000499v1 C 0 I 10 s otoGar3.GL873534 11052609 28 + 30473821 tcta--tctcctgtcctcttctcctcact-g i otoGar3.GL873534 C 0 I 4 s mm10.chr6 45757259 30 - 149736546 TCCATTTGCCCAGCCTTCTATTTCTGACT-g i mm10.chr6 C 0 I 1 s canFam3.chr20 16591625 30 + 58134056 TCCAACTCTCTAGTACTCTTTTCCTCACT-G i canFam3.chr20 I 12 I 1 s dasNov3.JH563077 1783458 29 - 2187301 tccatctcccaagtactctcttcatcata-- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 16137 228 + 635616 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I a score=67131.000000 s hg38.chrUn_KI270749v1 100867 8 + 158759 tatag-ttt--- s panTro5.chr3 201988090 8 - 202621043 tatag-ttt--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756107 8 - 205426864 tatag-ttt--- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572925 8 + 86207423 tatag-ttt--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055960 8 + 204787373 tatag-ttt--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987805 8 - 192460366 tatag-ttt--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099771 8 - 17224310 tatag-ttt--- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411928 8 - 41321030 tatag-ttt--- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483391 8 - 101219884 tgtag-ttt--- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869378 8 - 924385 tatag-ttt--- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711757 8 - 10587913 tatag-ttt--- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045588 9 - 98464013 tatagtttt--- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717232 9 + 27742158 tatagtttt--- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254625 9 - 4835464 tatagtttt--- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713514 9 + 4093027 tatagtttt--- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11052641 8 + 30473821 cacag-ttt--- i otoGar3.GL873534 I 4 I 1 s mm10.chr6 45757290 8 - 149736546 cacag-ttt--- i mm10.chr6 I 1 C 0 s canFam3.chr20 16591656 8 + 58134056 TATGC-TTT--- i canFam3.chr20 I 1 I 1 s dasNov3.JH563077 1783487 11 - 2187301 tataa-tgcttc i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 16137 228 + 635616 I e eulMac1.LGHX01000499v1 16219 10 + 631505 I e proCoq1.NW_012148064v1 586768 10 + 2414909 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I a score=95086.000000 s hg38.chrUn_KI270749v1 100875 8 + 158759 agcatatg s panTro5.chr3 201988098 8 - 202621043 agcatatg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756115 8 - 205426864 agcatatg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572933 8 + 86207423 agcatatg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055968 8 + 204787373 agcatata i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987813 8 - 192460366 agcatata i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099779 8 - 17224310 agcatata i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411936 8 - 41321030 agcatata i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483399 8 - 101219884 agcatatg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869386 8 - 924385 agcatata i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711765 8 - 10587913 agcatatg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045597 8 - 98464013 agcacaca i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717241 8 + 27742158 agcacatg i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254634 8 - 4835464 agcacatg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713523 8 + 4093027 agcacatg i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586778 8 + 2414909 agcaaact i proCoq1.NW_012148064v1 I 10 C 0 s eulMac1.LGHX01000499v1 16229 8 + 631505 agcacacc i eulMac1.LGHX01000499v1 I 10 I 814 s eulFla1.LGHW01000501v1 16365 8 + 635616 agcacacc i eulFla1.LGHW01000501v1 I 228 I 814 s otoGar3.GL873534 11052650 8 + 30473821 agcacacc i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45757298 7 - 149736546 -ccagatg i mm10.chr6 C 0 I 2 s canFam3.chr20 16591665 8 + 58134056 AACCTAct i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1783498 8 - 2187301 agcaaact i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I a score=2057818.000000 s hg38.chrUn_KI270749v1 100883 165 + 158759 tgccaccttgctgttccctctgcctagcatgcttttccttcagatatccagctagctcatttctgcatctctttcatgcatttgctcaaatttcatcttttcagtgagtctttttctgaatgctcaatttaaaattcacccc-----tatttcct-aaaactccttc---------tctg s panTro5.chr3 201988106 163 - 202621043 tgccaccttgctgttccctctgcctagcatgcttttccttcagatatccagctagctcatttctgca--tctttcatgcatttgctcaaatttcatcttttcagtgagtctttttctgaatgctcaatttaaaattcacccc-----tatttccc-aaaactccttc---------tctc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756123 165 - 205426864 tgccaccttgctgttccctctgcctagcatgcttttccttcagatatccagctagctcatttctgcatctctttcatgcatttgctcaaatttcatcttctcagtgagtctttttctgaacgctcaatttaaaattcacccc-----tacttccc-aaaactccttc---------tctg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67572941 166 + 86207423 tgccaccttgccgtttcctctgcctagcatgcttttccttcagatatccagctagctcatttctgcatctctttcatgcatttgctcaaatttcaccttttcagtgagtctttttctgaatgctcgatttaaaattcacccc-----tatttcccaaaaactccttc---------tctg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66055976 166 + 204787373 tgccaccttgctgttccctctgcctagcatgctcttccttcagatatccagctagctcgcttctgcatctctttcatgtatttgctcaaatttcaccttttcagtgagtctttttctgaatgctcaatttaaaattcacccc-----tatttcccaaaaactcctta---------tctg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987821 166 - 192460366 tgccaccttgctgttccctctgcctagcatgctcttccttcagatatccagctagctcgcttctgcatctctttcatgtatttgctcaaatttcaccttttcagtgagtctttttctgaatgctcaatttaaaattcacccc-----tatttcccaaaaactcctta---------tctg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099787 166 - 17224310 tgccaccttgctgttccctctgcctagcatgctcttccttcagatatccagctagctcgcttctgcatctctttcatgtatttgctcaaatttcaccttttcagtgagtctttttctgaatgctcaatttaaaattcacccc-----tatttcccaaaaactcctta---------tctg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17411944 166 - 41321030 tgccaccttgctgttccctctgcctagcatgctcttccttcagatatccagctagctctcttctgcatctctttcatatatttgctcaaatttcaccttttcagtgagtctttttctgaatgctcaatttaaaattcacccc-----tatttcccaaaaactcctta---------tctg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483407 166 - 101219884 tgccaccttgctgttccctctgcctagcatgctcttccttcagatatccagctagctcacttctgcatctctttcatgtatttgctcaaatttcaccttttcagtgagtctttttctgaatgttcaatttaaaattcacccc-----tatttcccaaaaactcccta---------tctg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869394 166 - 924385 tgccaccttgctgttccctctgcctagcatgctcttccttcagatatccagctagctcgcttctgcatctctttcatgtatttgctcaaatttcaccttttcagtgagtctttttctgaatgctcaatttaaaattcacccc-----tatatcccaaaaactcctta---------tctg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711773 166 - 10587913 tgccaccttgctgttccctctgcctagcatgctcttccttcagatatccagctagctcacttctgcatctctttcatgtatttgctcaaatttcaccttttcagtgaggctttttctgaatgctcaatttaaaattcacccc-----tatttccccaaaactcctta---------tctg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045605 165 - 98464013 tgccatcttgctgttccctctgcctagcatgttcttccttcagaaatccagctagctcatttacgcattcctttcatgtatttgctcaagtttcaccatttcaatgagtctttttctgaatgctcaatttaagattcacctc-----tatttccc-aaaactcctta---------tttg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717249 165 + 27742158 taccaccttgccgttccctctgcctagcatgctcttccctcagatatccagctagctcatttatgcatctctttcatgcatatgctcaaatttcaccatttcaatgagtctttttctgaatgctcaatttgagattcatctt-----tatttccc-aaaactcctta---------tttg i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254642 163 - 4835464 tgccaccttgctgttccctctgcctagcatgtttttccttcagatatccagctagctcatttatgcatctctttcatgtatatgctca--tttcaccatttcaacgagtctttttctgaatgctcaatttaagattcatctc-----tatttccc-aaaactcctta---------tttg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713531 165 + 4093027 tgccaccttgctcttccctctgcctagcatgttcttccttcagatatccagctagcttatttatgcatctctttcatgtatttgctcaaatttcaccatttcaatgagtctttttctgaatgctcaatttaagattcacctc-----tatttctc-aaaactcctta---------tttg i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586786 164 + 2414909 tgccacctcgctgttccctccacctggaatgctcttccttcagaaa-ccagttggctcatttccaaacccctttggtgtatttactcaaatttcaccttttcagtaagtctttatatgaatgctcaatttaaaattgacccc-----tattcccc-aaaatttctca---------tctg i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11052658 148 + 30473821 tgccaccttgctggtccctctacctggaatgctcttccttcaga----cattcagctc---------------------atttacccaaatttctccttttcagtaattctttatctgaat-ttcaatttaaaattcatccc-----tattctcc-caaatttcttatcgtcctcctctg i otoGar3.GL873534 C 0 I 426 s mm10.chr6 45757307 163 - 149736546 tgtctccttgcttttaactctacaggggatgatccttacttggatgcataactggatcact----catcactctcaggtattt-ttcaagtttt-tcttttaaataagtcttcattggagtactcag-ttaaactccacatccagtttatttttt-ctaagctttca---------acta i mm10.chr6 I 2 C 0 s canFam3.chr20 16591673 165 + 58134056 tggtaccttgctgttcccgccacctggaatgttcttccttcagatatccaactggctcatttcttctcttctttcatgcatttgttcaagtgtcagccttctagcaagttctcatctgaatactcaatgtaaaattcatctc-----tattctca-aaaattcctta---------tctg i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1783506 161 - 2187301 ggacaccttgctgttccctgtacctggaatgctcgaccttcagatatcaaacctgctcattcattcacctctttc----atttgctcaaatttcagcttttcactgcagcctttcctgaagattcaatttaaaattcacccc-----tctttccc-tcaactcctta---------tctg i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 16373 814 + 635616 I e eulMac1.LGHX01000499v1 16237 814 + 631505 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I a score=256734.000000 s hg38.chrUn_KI270749v1 101048 22 + 158759 ccttctctgagtgatttccccc s panTro5.chr3 201988269 22 - 202621043 ccttctctgagtgatttccccc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756288 22 - 205426864 ccttctctgagagatttccccc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67573107 20 + 86207423 cct--tctgagtgatttcctcc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66056142 22 + 204787373 ccttctctgagtgatttccccc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60987987 22 - 192460366 ccttctctgagtgatttccccc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099953 22 - 17224310 ccttctctgagtgatttccccc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17412110 22 - 41321030 ccttctctgagtgatttctccc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483573 22 - 101219884 ccttctctgagtgatttccccc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869560 22 - 924385 ccttctctgagtgatttccccc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711939 19 - 10587913 ccttctctgat---tttccccc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045770 22 - 98464013 ccttctctgagtgatttcctcc i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717414 22 + 27742158 ccttctctgggtgatttcctcc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254805 22 - 4835464 ccttctctgagtgatttcctcc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713696 22 + 4093027 ctttctctgagtgatttcctcc i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 586950 22 + 2414909 ccttctctgagttatttccccc i proCoq1.NW_012148064v1 C 0 C 0 s mm10.chr6 45757470 22 - 149736546 cccttgcaacgttattttctcc i mm10.chr6 C 0 C 0 s canFam3.chr20 16591838 22 + 58134056 ctttctctgagttattttcctc i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1783667 22 - 2187301 cctgctctgaggttttgcctcc i dasNov3.JH563077 C 0 I 5 e eulFla1.LGHW01000501v1 16373 814 + 635616 I e eulMac1.LGHX01000499v1 16237 814 + 631505 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I e otoGar3.GL873534 11052806 426 + 30473821 I a score=9557.000000 s hg38.chrUn_KI270749v1 101070 1 + 158759 a s panTro5.chr3 201988291 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756310 1 - 205426864 c i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67573127 1 + 86207423 c i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66056164 1 + 204787373 c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60988009 1 - 192460366 c i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099975 1 - 17224310 c i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17412132 1 - 41321030 c i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483595 1 - 101219884 c i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869582 1 - 924385 c i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711958 1 - 10587913 c i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045792 1 - 98464013 c i calJac3.chr15 C 0 I 5 s saiBol1.JH378125 27717436 1 + 27742158 c i saiBol1.JH378125 C 0 I 5 s cebCap1.NW_016107467v1 254827 1 - 4835464 c i cebCap1.NW_016107467v1 C 0 I 5 s aotNan1.NW_018502033v1 3713718 1 + 4093027 c i aotNan1.NW_018502033v1 C 0 I 5 s mm10.chr6 45757492 1 - 149736546 t i mm10.chr6 C 0 I 5 s canFam3.chr20 16591860 1 + 58134056 c i canFam3.chr20 C 0 I 5 s dasNov3.JH563077 1783694 1 - 2187301 c i dasNov3.JH563077 I 5 C 0 e eulFla1.LGHW01000501v1 16373 814 + 635616 I e eulMac1.LGHX01000499v1 16237 814 + 631505 I e proCoq1.NW_012148064v1 586972 0 + 2414909 C e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I e otoGar3.GL873534 11052806 426 + 30473821 I a score=892838.000000 s hg38.chrUn_KI270749v1 101071 87 + 158759 acttataa----tattctcatatgctattgatttaacttatttattttatttatagtc-tattttc--c-tcattaaaatgcaagctccattaca s panTro5.chr3 201988292 87 - 202621043 acttataa----tattctcatatgctattgatttaacttatttattttatttatagtc-tatttta--c-tcattaaaatgcaagctccattaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756311 87 - 205426864 acttataa----tattctcatatgctattgatttaacttatttattttatttatagtc-tattttc--c-tcattaaaatgcaagctccattaca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67573128 87 + 86207423 acttataa----tattctcatgtgctattgatttaacttatttatttcatttatagtc-tattttc--c-tcattaaaatgcaagctccattaca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66056165 87 + 204787373 acttacaa----tattctcatgtgctatagatttaacttattcatattacttatagtc-tattttc--c-tcattaaaatgcaagctccattaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60988010 87 - 192460366 atttacaa----tattctcatgtgctatagatttaacttattcatattacttatagtc-tattttc--c-tcattaaaatgcaagctccattaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11099976 87 - 17224310 acttacaa----tattctcatgtgctatagatttaacttattcatattacttatagtc-tattttc--c-tcattaaaatgcaagctccattaaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17412133 87 - 41321030 acttacaa----tattctcatgtgctatagatttaacttattcattttacttatagtc-tattttc--c-tcattaaaatgcaagctccattaaa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483596 87 - 101219884 acttacaa----tattcccatgtgctatagatttaacttattcattttacttatagtc-tattttc--c-tcattaaaatgcaagctccattaca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869583 87 - 924385 atttacaa----tattctcatgtgctatagatttaacttattcattttacttatagtc-tattttc--c-tcattaaaacgcaagctccattaaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6711959 87 - 10587913 acttacaa----tagtctcatgtgctatagatttaatttattgattttacttatagtc-tattttc--c-tcattaaaatgcaagctccattaca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045798 87 - 98464013 acttaaaa----tattctcatgcgctatagatttaacttatttattttatttatagtc-tgttttc--c-tcattaaaatataagctccattaca i calJac3.chr15 I 5 C 0 s saiBol1.JH378125 27717442 87 + 27742158 acttaaaa----tattctcatgtgctatagatttaacttatttattttgtttatagtc-tgttttc--c-tcattaaaatataagctcctttaca i saiBol1.JH378125 I 5 C 0 s cebCap1.NW_016107467v1 254833 87 - 4835464 atttgaaa----tattctcatgtgctatagatttaacttatttattttatttatagtc-tgttttc--c-tcattaaaatataagctccattgca i cebCap1.NW_016107467v1 I 5 C 0 s aotNan1.NW_018502033v1 3713724 87 + 4093027 acttaaaa----tattctcatgtgctatagatttaacttatttattttatttatagtc-tgttttc--c-tcattaaaatataagctgcattaca i aotNan1.NW_018502033v1 I 5 C 0 s proCoq1.NW_012148064v1 586972 88 + 2414909 ---tatagtatttattctcataag-tggagatttaacttatttgttttatttttagtc-tgctttc--cttcattaaaatgtgagcatcattagg i proCoq1.NW_012148064v1 C 0 C 0 s mm10.chr6 45757498 74 - 149736546 atttgtat----cattctctcatggtataaaatga----gtttatcttatttttggca-ggtctca--c-caaccaaatcata-------ttg-- i mm10.chr6 I 5 C 0 s canFam3.chr20 16591866 89 + 58134056 acttacaa----tattttcatgtgctataaaattaacagattcattttatttatggtg-tgtctgtaat-ccaccaacacttgagctccattagg i canFam3.chr20 I 5 C 0 s dasNov3.JH563077 1783695 67 - 2187301 acttataa----tgttctcatgcactattaaattaacttatttattttatgtatggtcatgaatcc--c-ccat--------------------- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 16373 814 + 635616 I e eulMac1.LGHX01000499v1 16237 814 + 631505 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I e otoGar3.GL873534 11052806 426 + 30473821 I a score=40051.000000 s hg38.chrUn_KI270749v1 101158 4 + 158759 tcag s panTro5.chr3 201988379 4 - 202621043 tcag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756398 4 - 205426864 tcag i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67573215 4 + 86207423 tcag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66056252 4 + 204787373 tcat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60988097 4 - 192460366 tcat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11100063 4 - 17224310 tcat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17412220 4 - 41321030 tcac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483683 4 - 101219884 tcac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869670 4 - 924385 tcac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6712046 4 - 10587913 tcac i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045885 4 - 98464013 tcgc i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717529 4 + 27742158 tcac i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254920 4 - 4835464 tcac i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713811 4 + 4093027 tcac i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 587060 4 + 2414909 tcat i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11053232 4 + 30473821 tcat i otoGar3.GL873534 I 426 C 0 s mm10.chr6 45757572 4 - 149736546 ttat i mm10.chr6 C 0 C 0 s canFam3.chr20 16591955 4 + 58134056 tcat i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 16373 814 + 635616 I e eulMac1.LGHX01000499v1 16237 814 + 631505 I e micMur3.chr32 1605130 1059 - 9149476 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I e dasNov3.JH563077 1783762 0 - 2187301 C a score=1590579.000000 s hg38.chrUn_KI270749v1 101162 121 + 158759 ggattgttgtttgttttgttctctgatgcatcccagagcctacaacagtgctgacatgtaataggtcctcaataaaca-------------------tttgttgaat---ggaCAGAGGCATGCATGCAGTGACTAATGAAA--T s panTro5.chr3 201988383 121 - 202621043 ggattgtagtttgttttgttctctgatgcatcccagagcctacaacaatgctgacatgtaataggtcctcaataaaca-------------------tttgttgaat---ggaCAGAGGCATACATGCAGTGACTAATGAAA--T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756402 121 - 205426864 ggattgttgtttgttttgttctctgatgcatgccagagcctacaacagtgctgactcgtaataggtcctcaataaaca-------------------tttgttgaat---ggaCAGAGGCACGCATGCAGTGACTAATGAAA--T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67573219 121 + 86207423 ggattgttgtctgttttgttctctgatgcatcccagagcctacaacagtgctgacacgtaataggtcctcaataaaca-------------------tttgttgaac---ggaCAGAGGCATGCATGCAGTGACTAATGAAA--T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66056256 122 + 204787373 ggattgttgtctattttgttctctgatgcatcccagagcctacaacagtgctggcatgcagtaggtcctcaataaatat------------------tttgttgaat---gaaCAGAGGCATGCATGCAGTGACTaatgaaa--t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60988101 122 - 192460366 ggattgttgtctattttgttctctgatgcatcccagagcctacaacagtgctggcatgcagtaggtcctcaataaatat------------------tttgttgaat---gaaCAGAGGCATGCATGCAGTGACTAATGAAA--T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11100067 122 - 17224310 ggattgttgtctattttgtcctctgatgcatcccagagcctacaacagtgctggcatgcagtaggtcctcaataaatat------------------tttgttgaat---gaaCAGAGGCATGCATGCAGTGACTAATGAAA--T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17412224 122 - 41321030 gggttgttgtctattttgttctctgatgcatcccagagcctacaacagtgctggcatgcagtaggtcctcaataaatat------------------tttgttaaat---gaaCAGAGGCATGCATGCAGTGACTAATGAAA--T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483687 121 - 101219884 ggattgttgtctgttttgttttctgatgcatcccagagcctacaacagtgctgacatgcagtaggtcctcaataaata-------------------tttgttgaat---gaaCAGAGGCATCCATGCAGTGACTAATGAAA--T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869674 122 - 924385 gggttgttgtctattttgttctctgatgcatcccagagcctacaacagtgctggcatgcagtaggtcctcaataaatat------------------tttgttgaat---gaaCAGAGGCATGCATGCAGTGACTAATGAAA--T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6712050 122 - 10587913 ggattgttgtctgttttgttctctgatgcatgccagagcctacaacagtgctggcatgcagtaggtcctcaataaatat------------------tttgttgaat---gaaCAGAGGCATGCATGCAGTGACTAATGAAA--T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46045889 121 - 98464013 acactgtggtctgttttgttctctgatgcatcccagagcctacaacagtgctggcacttaacaggtcctcaataaaca-------------------tttgttgagt---gaaCAGAGGCACGCATGCGGGGACTAATAAAA--T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717533 121 + 27742158 agattgtggtctgttttgttctctgatgcatcccagagcctacaacagtgctggcacttgataggtcctcaataaacg-------------------tttgttgaat---gaaCAGAGGCATGCATGCAGGGACTAATAAAA--T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 254924 121 - 4835464 agatggtggtctgttttgttctctgatgcatccgagagcctacaacagtgctggcacttaataggtcctcaataaaca-------------------tttgttgaat---gaaCAGAGGCATGCATGCAGGGACTAATGAAA--T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713815 121 + 4093027 agattgtggtctgttttgttctctgatgcatcccagagcctacaacagtgctggcacttaataggtcctcaataaaca-------------------tttgttgaat---gaatAGAGGCATGCATGCAGGGACTAATGAAA--T i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1606189 124 - 9149476 ggatttttgtctgttttgatcacttatgtatcccagagcctgcaacagtgccagcacatagtaggtactcaataaata-------------------tttgctgaataatgaatGAAGGCATGCATGCAGTGACTAATGGAC--G i micMur3.chr32 I 1059 C 0 s proCoq1.NW_012148064v1 587064 114 + 2414909 ggatttttgtctattt----------tgtatcccagagcctacaacagtgccagcacataataggtcctcaataaata-------------------tttgttgaataacgaatgaaGGCATGCATGCAGTGACTAATGGAA--T i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11053236 126 + 30473821 agatgttggtctaacttgttcacttacatatcccagagcctacaacagtgactgcacagaataggtcctcaacacaca-------------------tgtgttgaataatgaatGAAGGCAAGTCTGTGGTGATGAATGGAATGT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45757576 98 - 149736546 ggatttttggctcttatgtccactggtatgtccTAGAAACTCCAACAG----------------------AAAAGACA--------------------CTGTAAAGT---GGACAAAGGTGTGGTCATAAGACCCAATGGAG--A i mm10.chr6 C 0 C 0 s canFam3.chr20 16591959 140 + 58134056 ggatttttgttttttgtgttcactgatgcatcccagagtctacaaaagtgtaagcacatgataggtcctcaataaatatttggtgaaaaaaaaaatATTTGGTGAAT---GAATGGAGACATGAGTGTAGTCACTGATGGAA--C i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1783762 119 - 2187301 gggttttcatttgtgttgt-cattgctaaatcccagagcctacaacagtgccagcacataataggtcctcaa-aaata-------------------tttactgaat---gaacaaaGAAATGAATGCAGTTACTGATGGAA--T i dasNov3.JH563077 C 0 I 207 e eulFla1.LGHW01000501v1 16373 814 + 635616 I e eulMac1.LGHX01000499v1 16237 814 + 631505 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I a score=6392916.000000 s hg38.chrUn_KI270749v1 101283 416 + 158759 AACAC---------------------------------------------------------------------AAAATAAAT-----ATGTAAAATTCATAGGCAATATTATAAAATGAAATGTGTTGGCTGCTTGGGGTTATATAAGTGGAACATAGAAGTCAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTGATGTTAGTATTGACTCCCTTTT-CCCCACGATGAATGATGTTCTGAAGATCTTGATGCTAACATTAGTTTAAGCTCATTCAATACTGTCATAGGAGAGAG-AAAATCATTTGAGATCTTTGATATTAATATTCCAATCCCTCAC-CTCTGT--CTGTTTGAACTCATCAATCACTTTGGGAATAAA------------------------------------ACTGGAATAGTGTACAAATTC-----------------------------------------------------------ATGTTGAGGTGAGGGGTTTTAATATAGAAGATA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCAG----AATAAAA------TGATGAAACCAGA-AGGAGAGAGAAAC s panTro5.chr3 201988504 416 - 202621043 AACAC---------------------------------------------------------------------AAAATAAAT-----ATGTAAAATTCATAGGCAATATTATAAAATGAAATGTATTGGCTGTTTGGGGTTATATAAGTGGAACACAGAAGAGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCCCACGATGAATGATGTTTTGAAGATCTTGATGCTAACATTAGTTTAAGCTCATTCAATACTGTCATAGGAGAGAG-AAAATCGTTTGAGATCTTTGATATTAATATTCCAATCCCTCAC-CTCTCT--CTGTTTGAACTCATCAATCACTTTGGGAATAAA------------------------------------ACTGGAATAGTGTACAAATTC-----------------------------------------------------------ATGTTGAGGTGAGGGGTTTTAATATAGAAGATA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCAG----AATAAAA------TGATGAAATCAGA-AGGAGAGAGAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756523 417 - 205426864 AACAC---------------------------------------------------------------------AAAATAAAT-----ATGTAAAATTCATAGGCAATATTATAAAATGAAATGTATTGGCTGTTTGGGGTTATATAAGTGGAACATAGAAGTGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCCCACGATGAATGATGTTTTGAAGATCTTGATGCTAACATTAGTTTAAGCTCATTCAATACTGTCATAGGAGAGAGAAAAATCGTTTGAGATCTTTGACATTAATATTCCAATCCCTCAC-CTCTGT--CTGTTTGAACTCATCAATCACTTTGGGAATAAA------------------------------------ACTGGAATAGTGTACAAATTC-----------------------------------------------------------ATGTTGAGGTGAGGGGTTTTAATATAGAAGATA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCAG----AATAAAA------TGATGAAACCAGA-AGGAGAGAGAAAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67573340 417 + 86207423 AACGC---------------------------------------------------------------------AAAATAAAT-----ATGTCAAATTCATAGGCAATATTATAAAATGAAATGTATTGGCTGTTTGGTGTTATGTAAGTGGAACACAGAAGTGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCCCAAGATGAATGATGTTTTGAAGATCTTGATGCTAACATTAGTTTAAGCTCATTCAATACTGTCATAGGAGAGAG-AAAATCATTTGAGATCTTTGATATTAATATTCCAATCCCTCAC-CTCTGT--CTGTTTGAACTCATCAATCACTTTGGGAATAAA------------------------------------ACTGGAATCGTGTACAAATTC-----------------------------------------------------------TTGTTGAGGTGAGGGGTTTTAATATAGAAGAGATTTTTTTTCTTTCC---CTTGAT-----------GTCTCAG----AATAAAA------TGATGAAACCAGA-AGGAGAGAGAAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66056378 416 + 204787373 aacac---------------------------------------------------------------------aaaacaaat-----aagtgaaattcataggcaatattataaaataaaatTTATTAGCTGTTTTGAGTTATATAAGTAGAACATAGAAGTGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCCCACGATGAATGATGTTTTGAAGATCTCGATGCTAACATTAGTTTAAACTCATTCAATACTGTCATAGGAGAGAG-AAAATCGTTTGAGATCTTTGATGTTAATATTCCAATCCCTCAC-CTCTGT--CTGTTTGGACTCATCAATCACTTTGGGAATAAA------------------------------------ACTGGAATAGTGTGCAAATTC-----------------------------------------------------------ATGATGAGGTGAGGGGTTTTAATATAGAAGGTA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCAG----AATAAAA------TGATGAAACTAGA-ACAAGAGAGAAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60988223 416 - 192460366 AACAC---------------------------------------------------------------------AAAACGAAT-----AAGTGAAATTCATAGGCAATATTATAAAATAAAATTTATTAGCTGTTTTGAGTTATATAAGTAGAACATAGAAGTGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCCCACGATGAATGATGTTTTGAAGATCTCGATGCTAACATTAGTTTAAACTCATTCAATACTGTCATAGGAGAGAG-AAAATCGTTTGAGATCTTTGATGTTAATATTCCAATCCCTCAC-CTCTGT--CTGTTTGGACTCATCAATCACTTTGGGAATAAA------------------------------------ACTGGAATAGTGTGCAAATTC-----------------------------------------------------------ATGATGAGGTGAGGGGTTTTAATATAGAAGATA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCAG----AATAAAA------TGATGAAACTAGA-ACAAGAGAGAAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11100189 416 - 17224310 AACAC---------------------------------------------------------------------AAAACGAAT-----AAGTGAAATTCATAGGCAATATTATAAAATAAAATTTATTAGCTGTTTTGAGTTATATAAGTAGAACATAGAAGTGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCCCACGATGAATGATGTTTTGAAGATCTCGATGCTAACATTAGTTTAAACTCATTCAATACTGTCATAGGAGAGAG-AAAATCGTTTGAGATCTTTGATGTTAATATTCCAATCCCTCAC-CTCTGT--CTGTTTGGACTCATCAATCACTTTGGGAATAAA------------------------------------ACTGGAATAGTGTGCAAATTC-----------------------------------------------------------ATGATGAGGTGAGGGGTTTTAATATAGAAGATA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCAG----AATAAAA------TGATGAAACTAGA-ACAAGAGAGAAAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17412346 416 - 41321030 AACAC---------------------------------------------------------------------AAAACGAAT-----ATGTGAAATTCATAGGCAATATTATAAAATAAAATTTATTAGCTGTCTTGAGTTATATAAGTAGAACATAGAAGTGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCCCACGATGAATGATGTTTTGAAGATCTCGATGCTAACATTAGTTTAAACTCATTCAATACTGTCATAGGAGAGAG-AAAATCGTTTGAGATCTTTGATGTTAATATTCCAATCCCTCAC-CTCTGT--CTGTTTGGACTCATCAATCACTTTGGGAATAAA------------------------------------ACTGGAATAGGGTGCAAATTC-----------------------------------------------------------ATGATGAGGTGAGGGGTTTTAATATAGAAGATA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCAG----AATAAAA------TGATGAAACTAGA-ACAAGAGAGAAAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64483808 416 - 101219884 AACAC---------------------------------------------------------------------AAAACGAAT-----GTGTGAAATTCATAGGCAATATTATAAAATAAAATTTATTAGCTGTTTTGAGTTATATAAGTAGAACATAGAAGTGAATT-AAAGCTTTAAGTAAGAGAGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCCCACGATGAATGATGTTTTGAAGATCTCGATGCTAACATTAGTTTAAACTCATTCAATACTGTCATAGGAGAGAG-AAAATCGTTTGAGATCTTTGATGTTAATATTCCAATCCCTCAC-CTCTGT--CTGTTTGAACTCATCAATCACTTTGGGAATAAA------------------------------------ACTGGAATAGTATACAAATTC-----------------------------------------------------------ATGATGAGGTGAGGGGTTTTAATATAGAAGATA-TTTTCTTCTTTCC---TTTGAT-----------GTCTCAG----AATAAAA------TGATGAAACCAGA-ACAAGAGAGAAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 869796 416 - 924385 AACAC---------------------------------------------------------------------AAAACTAAT-----ATGTGAAATTCATAGGCAATATTATAAAATAAAATTTATTAGCTGTTTTGAGTTATATAAGTAGAACATAGAAGTGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCCCACGATGAATGATGTTTTGAAGATCTCGATGGTAACATTAGTTTAAACTCATTCAATACTGTCATAGGAGAGAG-AAAATCGTTTGAGATCTTTGATGTTAATATTCTAATCCCTCAC-CTCTGT--CTGTTTGGACTCATCAATCACTTTGGGAATAAA------------------------------------ACTGGAATAGTGTGCAAATTC-----------------------------------------------------------ATGATGAGGTGAGGGGTTTTAATATAGAAGATA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCAG----AATAAAA------TGATGAAACTAGA-ACAAGAGAGAAAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6712172 416 - 10587913 AATAC---------------------------------------------------------------------AAAACGAAT-----ATGTGAAATTCACAGGCAATATTATAAAATAAAATTTATTAGCTGTTTTGAATTATATAAGTAGAACATAGAAGTGAATT-AAAGCTTTAGGTAAGAGGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCCCACGATGAATGATGTTTTGAAGATCTCGATGCTAACATTAGTTTAAACTCATTCAATACCGTCATAGAAGAGAG-AAAATCGTTTGAGATCTTTGATGTTAATATTCCAATCCCTCAC-CTCTGT--CTGTTTGAACTCATCAATCACTTTGGGAATAAA------------------------------------ACTGGAATAGTGTACAAATTC-----------------------------------------------------------ATGATGAGGTGAGGGGTTTTAATACAGAAGATA-TTTTCTTCTTTCC---CTTGAT-----------GTCTTAG----AATAAAA------TGATGAAACCAGA-ACAAAAGAGAAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46046010 416 - 98464013 AACAC---------------------------------------------------------------------AAAATAAAT-----TTGTAAAATTCATATTCAATATTATAAAATGAAATGTATTAGCTGTTTGGGGTTATATAAGTTGAACACAGAAGTGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCCGATGTTAGTATTGATTCCTTTTT-CCCCACGATGAATGATGTTTTGAAGATCTTGATGCTAACATTAGTTTAAGCTCATTCAGTACTGTCATAGGAGAGAG-AAAATCGTTTGAGATCTTTGATATTAATATTCTAATCCCTCAC-TTCTGT--CTGTTTGAACTCATCCATCACGTTGGGAATAAA------------------------------------ACTGGAACAGTGTACAAATTC-----------------------------------------------------------ATGATGAGGTGAGGAGTTTTAATATAGAAGATA-TTTTCTTCTTTTC---CTTGAT-----------GTCTATG----AATAAAA------TGATGAAGCCAGA-AGGAGAAAGAAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27717654 416 + 27742158 AACAC---------------------------------------------------------------------AAAACGAAT-----ATGtaaaatttatattcaatattataaaataaaatGTATTAGCTGTTTGGGGTTATTTAAGTTGAACATAGAAGTGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTGATGTTAGTACTGATTCCCTTTT-CCCCACGATGAATGATGTTTTGAAGATCTTGGTGCTAACATTAGTTTAAGCTCTTTCAATACTGTCATAGGAGAGAG-AAAATCGTTTGAGATCTTTGATATTAATATTCTAATCCCTTAC-TTCTGT--CTGTTTGAACTCATTCATCACGTTGGGAATAAA------------------------------------ACTGGAATAGTGTCCAAATTC-----------------------------------------------------------ATGATGAGGTGAGGAGTTTTAATATAGAAGATA-TTTTCTTCTTTCC---CTTAAT-----------GTCTCTG----AATAAAA------TGATGAAGCCAGA-AGGATAAAGAAAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 255045 416 - 4835464 AACAC---------------------------------------------------------------------AAAATGAAT-----ATGTAAAATTCATATTCAATATTATAAAATGAAATTTATTAGCTTTTTGGGGTTATATAAATTGAACATAGAAATGAATT-AAAGCTTTAAGTAAGAGGAAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCCCACGATGAATGATGTTTTGAAGATCTTGATGCTAACATTAGTTTAAGCTCATTCAGTACTGTCATAGGAGAGAG-AAAATCGTTTGAGATCTTTGATATTAATATTCTAATCCCTCAC-TTCTGT--CTGTTTGAACTCATTCATCACATTGGGAATAAA------------------------------------ACTGGAATAGTGTACAAATTC-----------------------------------------------------------ATGATGAGGTAAGGAGTTTTAATACAGAAGACA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCTG----AATAAAA------TGATGAAGCCAGA-AGGAGAAAGAAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3713936 412 + 4093027 AACAC---------------------------------------------------------------------AAAATGAAT-----ATGTAAAATTCATATTCAATATTATAAAATGAAATTTATTAGCTGTTTGGGGTCATATAAGTTGAACATAGAAGCGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CCACACGATGAATGATGTTTTGAAGATCTTGATGCTAACATTAGTTTAAGCTCATTCAATACTGTCACAGGAGAAAG-AAAATCGTTTGAGATCTTTGATATTAATATTCTAATCCCTCAC-TTCTGT--CTGTTTGAACTCATCCATCACGTTGGGAATAAA------------------------------------ACTGGAATAGTGTACAAATTC-----------------------------------------------------------ATGATGAGGTGAGGAGTTTTAATATAGAAGATA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCTG----AATAAAA------TGATGAAGCCAGA-AGG----AGAAAC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1606313 417 - 9149476 AATAC---------------------------------------------------------------------AAGAGGAAT-----ATGTAAAATTCATAGGTAATATTATGAAATGAAATTTATTAGCTGCTTGGGGTTACACAAGTTGTACATAGAAGTGAATT-AAAGCTTTAAGTGAGAAGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CTCCACGATGAATGATGTTTTGAAGATCTTGCTGCTAACATTAGTTTAAGCTCATTCAATACTGTCATAGGAGGGAG-AAAATCATTGGAGATCTCAGATATTAATATTCTGATCCCTCAC-CTCTGT--CTGTTTGAACTCATCCATCACTCTGAGAATAAA------------------------------------ACTGGGATAGTGTACAAATTC-----------------------------------------------------------ATGACGAGGTGAGAGGTTTTAATATAGGAGATA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCAG----AGTCAAA------TGATGAAGCCAGGAGGGGGGGAGGAAC i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 587178 417 + 2414909 AATAC---------------------------------------------------------------------AAGATGAAT-----ATGTAAAATTCATATGCAATATTATGAAATGAAATTTATTAGCTGCTTGGGGTTACACAGGTTGTATATAGAAGTGAATT-AAAGCTTTAAGTGAGAAGGAAGATCCTGATGTTAGTATTGATTCCCTTTT-CTCCACGATGAATGATGTCTTGAAGATCTTGCTGCT-ACATTAGTTTAAGCTCATTCAATACTGTCATAGGCGGGAG-AAAATCATTTGAGATCTCAGATATTAATATTCTGATCCCTCAC-CTCTGTCCCTGTTTGAACTCATCCATCACTCTGAGAATAAA------------------------------------ACTGGGATAGTGTACAAATTC-----------------------------------------------------------ATGATGAGGTGAGGGGGTTTAATATAGGAGACA-TTTTCTTCTTTTC---CTTGAT-----------GTCTCAG----AGTCAAA------TGACGAAGCCAGG-TGGGGAGAGGAAC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11053362 415 + 30473821 AATCC---------------------------------------------------------------------AAGATGAAC-----ATGTAAAATTCATAGGCAATAGTATTCAGTGAAATTTATTAGCTGTTTGGAGTTATATGAGTTGTACATAGAAGTGAATT-AAAGCTTTAAGTGAGAAGGAAGATCCTGAT-TTAGCATTGATTCCCTTTTCCCCCACGATGAATGATGTTTTGAAGATCTGGCTGCTAACATTAGTTTAAGCTCATTCAATACTGTCATAGGAGGGAG-AAAATCGTTTGAGATCTCAGATATTAATATTCCGATCTCTCAC-CTCTGT--CTGTTTGAACTCATCAATCACTGTGAGAATAAA------------------------------------ACTGGGATAGTGTACAAATTC-----------------------------------------------------------ATGATGAAGTG-GGGGTTTTCATATGGAAGATA-TTTTCTTCTTTCC---CTTGAT-----------GTCTCAG----AGTAAAA------TCATGAAGCCGGA-AGGGGAGAGCAAC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45757674 498 - 149736546 AGTAT---------------------------------------------------------------------ATGATAAATCTAAAAAAGAAAAATTATAGGTGAAGTCATAAG--GAAATTTATTAGTTGATCAGGATTACACTACTTGTATATAGAAGTGAATT-AAAGTTCTA----AGAAAGAAGATATTGATGTTCATATTGATTCTCTTT--CTTCAGGATGAATTATGTTTTGAAGATTCTGATGCTAACATTAGTTTGAGCTCATTCAATATTGTCAGAGTAGGAAG-AAAATCATTTGAGATCTCAGATATTAATATTCCATTCCCTAAT-GTCTGC--CTCTTTGAACTCATCCATCACCTTGGGAATAAATTCACGAAGTATAAGGGCAGGAAAATATCTGGTGTCATTGCAATATAGT-CATATTCATTTATTTTCGTACTAAGTATGATCACATATGCTATGTGCCTTAATATATACTATTCTTATTATAAACTGAAAAGTTTTAATACAGAAGACT-GTTG------------TTTGAT-----------ATCTTTA----AGTAAAT------TAATGGAACCAGA-AT-AGAGAAAAGT i mm10.chr6 C 0 I 1 s canFam3.chr20 16592099 421 + 58134056 AATAG---------------------------------------------------------------------AAGATGAAT-----ATGTAAAATTCATAGACAATGTTATTAAATAAAATTTGTTAGCTATTT-GAGCTCTGTAAGTTGTACACAGAAGGGAATT-AAAGCTTTAAGTAAGAGGGAAGATCCTAATGTTAGTATTGATTCCCTTTT-CTCCACAATGAATGATATTTTGAAGATCTTGATGCTAACATTAGTTTAAGCTCATTCAATACTGTCGTAAGAGGGAG-AAAATCGTTTGAGACCTCATATATTAATATTCCAATCCTTCACTTTCTGT--CTGTTTGAACTCATCCATCACTTTGGAAGTAAA------------------------------------ACTGGAATAGTGTACAAATTC-----------------------------------------------------------ATGATGAGGTCAGGGGTTTTAATATAAAAGGCA--TTTCTTCTTTCC---AGTGAT-----------GTCTCAG----AGTAATGAAGTCCTGATGAAGCCAGG-AGGGGAGAGGAAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1784088 502 - 2187301 aacacagagagcagatagcaagcaaggggcaaggggggggggaggataaataaataaaaataaatctttttaaaaaaaTGAAT-----CTGTAAAATTCATAGGAAATATTATAAAATTAAATGTATTAGCTGATTGCTATTATGCAAGTTGTATATAGAAGGGAATTAAAAGCTTTAAGTAACAGGGAAGATCCTGATGTTAGTATTGATTCTCCTTT-CCTCAGGATGAATGATGTTTTGAAAATCTGGATGCTAACATTAGTTTAAGCTCATTCAATACTGTCACAGGAGGGAG-AAAATCATTTGAGACCTCGGATTTTAATATTCCAATCCCTCACAATTGGC--CTGTTTGAACTCATCCATCACTTTGGGAATAAA------------------------------------ACCAGAATAGTGTACACATTC-----------------------------------------------------------ATGATGAAGTGAGTAGTTTCAACATGCAAGACA-TTTTCCTGTTTCTAAACTTGATTATTTTCCCTAGTTTTTATTCTACTGAAA------TGATGAAGCCAGG-AATGAAGAAC--- i dasNov3.JH563077 I 207 C 0 e eulFla1.LGHW01000501v1 16373 814 + 635616 I e eulMac1.LGHX01000499v1 16237 814 + 631505 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e ponAbe2.chr3 69644658 1379 + 202140232 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e tarSyr2.KE939134v1 164863 1325 + 958716 I a score=23023.000000 s hg38.chrUn_KI270749v1 101699 1 + 158759 T s panTro5.chr3 201988920 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756940 1 - 205426864 T i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69646037 1 + 202140232 T i ponAbe2.chr3 I 1379 C 0 s rheMac8.chr2 66056794 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60988639 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11100605 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17412762 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484224 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870212 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6712588 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46046426 1 - 98464013 T i calJac3.chr15 C 0 I 2 s saiBol1.JH378125 27718070 1 + 27742158 T i saiBol1.JH378125 C 0 I 2 s cebCap1.NW_016107467v1 255461 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 I 2 s aotNan1.NW_018502033v1 3714348 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 I 2 s tarSyr2.KE939134v1 166188 1 + 958716 T i tarSyr2.KE939134v1 I 1325 C 0 s micMur3.chr32 1606730 1 - 9149476 T i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 587595 1 + 2414909 T i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 17051 1 + 631505 T i eulMac1.LGHX01000499v1 I 814 C 0 s eulFla1.LGHW01000501v1 17187 1 + 635616 T i eulFla1.LGHW01000501v1 I 814 C 0 s otoGar3.GL873534 11053777 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16592520 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1784590 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45758172 1 - 149736546 I e rhiRox1.KN296641v1 1368820 1387 - 1467263 I e papAnu3.chr2 59546849 1388 + 187378091 I e nasLar1.chr2 57718326 1387 + 181502896 I e rhiBie1.NW_016820128v1 1223068 1387 - 2311269 I e nomLeu3.chr21 67573757 0 + 86207423 C a score=22380.000000 s hg38.chrUn_KI270749v1 101700 1 + 158759 T s panTro5.chr3 201988921 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756941 1 - 205426864 T i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69646038 1 + 202140232 T i ponAbe2.chr3 C 0 I 343 s nomLeu3.chr21 67573757 1 + 86207423 T i nomLeu3.chr21 C 0 I 1 s rheMac8.chr2 66056795 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60988640 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11100606 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17412763 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59548237 1 + 187378091 T i papAnu3.chr2 I 1388 C 0 s chlSab2.chr22 64484225 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870213 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57719713 1 + 181502896 T i nasLar1.chr2 I 1387 C 0 s colAng1.NW_012114711v1 6712589 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1370207 1 - 1467263 T i rhiRox1.KN296641v1 I 1387 C 0 s rhiBie1.NW_016820128v1 1224455 1 - 2311269 T i rhiBie1.NW_016820128v1 I 1387 C 0 s tarSyr2.KE939134v1 166189 1 + 958716 T i tarSyr2.KE939134v1 C 0 I 1077 s micMur3.chr32 1606731 1 - 9149476 T i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 587596 1 + 2414909 G i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 17052 1 + 631505 T i eulMac1.LGHX01000499v1 C 0 I 631 s eulFla1.LGHW01000501v1 17188 1 + 635616 T i eulFla1.LGHW01000501v1 C 0 I 5258 s otoGar3.GL873534 11053778 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45758173 1 - 149736546 T i mm10.chr6 I 1 C 0 s canFam3.chr20 16592521 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1784591 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e aotNan1.NW_018502033v1 3714349 2 + 4093027 I e cebCap1.NW_016107467v1 255462 2 - 4835464 I e saiBol1.JH378125 27718071 2 + 27742158 I e calJac3.chr15 46046427 2 - 98464013 I a score=19110.000000 s hg38.chrUn_KI270749v1 101701 1 + 158759 T s panTro5.chr3 201988922 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756942 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67573759 1 + 86207423 T i nomLeu3.chr21 I 1 C 0 s rheMac8.chr2 66056796 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60988641 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11100607 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17412764 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59548238 1 + 187378091 T i papAnu3.chr2 C 0 I 3327 s chlSab2.chr22 64484226 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870214 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57719714 1 + 181502896 T i nasLar1.chr2 C 0 I 3329 s colAng1.NW_012114711v1 6712590 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1370208 1 - 1467263 T i rhiRox1.KN296641v1 C 0 I 2302 s rhiBie1.NW_016820128v1 1224456 1 - 2311269 T i rhiBie1.NW_016820128v1 C 0 I 2302 s micMur3.chr32 1606732 1 - 9149476 T i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 587597 1 + 2414909 T i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11053779 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45758174 1 - 149736546 T i mm10.chr6 C 0 C 0 s canFam3.chr20 16592522 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1784592 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17053 631 + 631505 I e ponAbe2.chr3 69646039 343 + 202140232 I e tarSyr2.KE939134v1 166190 1077 + 958716 I e aotNan1.NW_018502033v1 3714349 2 + 4093027 I e cebCap1.NW_016107467v1 255462 2 - 4835464 I e saiBol1.JH378125 27718071 2 + 27742158 I e calJac3.chr15 46046427 2 - 98464013 I a score=3437844.000000 s hg38.chrUn_KI270749v1 101702 287 + 158759 GATTTTTGTATTTCAAATTTCT-ATTATTTATTATTTaagagtatatg------------------atttggagtcaggataaaattgagtcctcacctcaactctgtaatttcacagctatttgttcttag-aaaaattcctcaatgtttcagatcctcaagt-tctttctcgttgagaaaatgaagacggtaatatccatctcatgcaattttaggaaaattaaataaagttagatattttgaaaaatgtactaaatttagaatagtac----ctg----------------------------------------------------gtacacaTCTTCTCAGTAATGATAAACA-GAATAT s panTro5.chr3 201988923 287 - 202621043 GATTTTTGTATTTCAAATTTCT-ATTATTTATTATTTaagagtatatg------------------atttggagtcagggtaaaattgagtcctcacctcaactctgtaatttcacagctatttgttcttag-aaaaattcctcaatgtttcagatcctcaagt-tctttctcgttgagaaaatgaagacggtaatatccatctcatgcaattttaggaaaattaaataaagttagatattttgaaaagtgtactaaatttagaatagtac----ctg----------------------------------------------------gtacataTCTTCTCAGTAATGATAAACA-GAATAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204756943 287 - 205426864 GATTTTTGTATTTCAAATTTCT-ATTATTTATTATTTaagagtatatg------------------atttggagtcagggtaaaattgagtcctcacctcaactctgtaatttcacagctatttgttcttag-aaaaattcctcagtgtttcagatcctcaagt-tctttctcgttgagaaaatgaagacggtaatatccatctcatgcaattttaggaaaattaaataaagttagatattttgaaaaatgtactaaatttagaatagtac----ctg----------------------------------------------------gtacataTCTTCTCAGTAATGATAAACA-GAATAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67573760 286 + 86207423 GATTTTTATATTTCAAATTTCT-ATAATTTATTATTTaagagtatatg------------------atttggagtcagggtaaaattgagtcctcacctcaactctgtaatttcacagctatttgttcttag-aaaaattcctcaatgtttcagatcctcaagt-tctttctcgttgagaaaatgaagacagtaatatccacctcatgcaattttaggaaaattaaataaagttagata-tttgaaaaatgtactatatttagaatagtac----ctg----------------------------------------------------gtacataTCTTCTCAGTAATGATAAACA-GAATAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66056797 283 + 204787373 GATTTTTGTATTTCAAATTTCT-ATTATTTATTATTTaagagtatatg------------------atttggagtcagggtaaaattgagtccacacctcaactctgtaatttcacagctatttgttcttag-aaaaattcctcagtgttttagatcctcaagt-tctttctctctgagaaaatgaagacagtaatatccatgtcatgcaattttaggaaaactaaatgaagttagat--tttgaaaactgtactatatttagaatagaac----ctg----------------------------------------------------gtacatatcttctcagtaatgat-agcA-GAATA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60988642 283 - 192460366 GATTTTTGTATTTCAAATTTCT-ATTATTTATTATTTaagagtatatg------------------atttggagtcagggtaaaattgagtccacacctcaactctgtaatttcacagctatttgttcttag-aaaaattcctcagtgttttagatcctcaagt-tctttctcactgagaaaatgaagacagtaatatccatgtcatgcaattttaggaaaactaaatgaagttagat--tttgaaaaatgtactatatttagaatagaac----ctg----------------------------------------------------gtacataTCTTCTCAGTAATGAT-AACA-GAATA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11100608 283 - 17224310 GATTTTTGTATTTCAAATTTCT-ATTATTTATTATTTaagagtatatg------------------atttggagtcagggtaaaattgagtccacacctcaactctgtaatttcacagctatttgttcttag-aaacattcctcagtgttttagatcctcaagt-tctttctcactgagaaaatgaagacagtaatatccatgtcatgcaattttaggaaaactaaatgaagttagat--tttgaaaaatgtactatatttagaatagaac----ctg----------------------------------------------------gtacataTCTTCTCAGCAATGAT-AACA-GAATA- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17412765 284 - 41321030 GATTTTTGTATTTCAAATTTCT-ATTATTTATTATTTaagagtatatg------------------atttggagtcagggtaaaattgagtccacacctcaactctgtaatttcacagctatttgttcttag-aaaaattcctcagtgtttcagatcctcaagt-tctttctcactgagaaaatgaagacagtaatatccatgtcatgcaattttaggaaaactaaatgaagttagat--tttgaaaaatgtactatatttagaatagaac----ctg----------------------------------------------------gtacataTCTTCTCAGTAATGATAAACA-GAATA- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484227 284 - 101219884 GATTTTTGTATTGCAAATTTCT-ATTATTTATTATTTaagagtatgtg------------------atttggagtcagggtaaaattgagtccacacctcaactctgtaatttcacagctatttgttcttag-aaaaattcctcagtgtttcagatcctcaagt-tctttctcactgagaaaatgaagacagtaatatccatgtcatgcaattttaggaaaactaaaagaagttagat--tttgaaaaatgtactatatttagaatagaac----ctg----------------------------------------------------gcacataTCTTCTCAGTAATGATAAACA-GAATA- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870215 284 - 924385 GATTTTTGTATTTCAAATTTCT-ATTATTTATTATTTaagagtatatg------------------atttggagtcaggataaaattgagtccacacctcaactctgtaatttcacagctatttgttcttag-aaaaattcctcagtgtttcagatcctcaagt-tctttctcactgagaaaatgaagacagtaatatccatgtcatgcaattttaggaaaactaaatgaagttagat--tttgaaaaatgtactatatttagaatagaac----ctg----------------------------------------------------gtacataTCTTCTCAGTAATGATAAACA-GAATA- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6712591 284 - 10587913 GATTTTTGTATTTCAAATTTCT-ACTATTTATTATTTaagagtatatg------------------atttggagtcagggtaaaatttagtccacacctcaactctgtagtttcacagcaatttattcttag-aaaaattcctcagtgtttcagatcctcaagt-tctttctcactgagaaaatgaagacagtaatatccatgtcacgcaattttaggaaaactaaatgaagttagat--tttgaaaaatgtactatatttagaatagaac----ctg----------------------------------------------------gtacataTCTTCTCAGTAATGATAAACA-GAATA- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46046429 321 - 98464013 -TATTTTGTATTTCAAATTTCT-ATTATTTATTATTTaagagtatatg------------------atttggagtcagaataaaattgagtccacacttcaactctgtaatttcatagctgtttgttcttag-aaaaattccttaatgtttcagatattcaaat-tctttctcattgataaaatgaagacagtaaca----------------TTAGGAAAAATAACTGAAGTTAGATATTTTGATAAATGTACTATATGTAAAATAATAT----CTGAGTACTGAGTACAGTATGTTCTCGGTAATGAATACATATGTTACTGTAATGAGTACATATGTTCTCAGTAATAATAAACA-GAATA- i calJac3.chr15 I 2 I 1 s saiBol1.JH378125 27718073 322 + 27742158 TTTTTTTGTATTTCAAATTTCT-ATTATTTATTATTTaagagtatatg------------------atttggagtcagagtaaaattgagtccacatttcaactatgtaatttcatagctgtttgttcttag-aaaaatttcttaatgtttcagatattcaaat-tctttctcattgatcaaatgaagacagtaata----------------TTAGGAAAAATAAATGAAGTTAGATATTTTGATAAATGTACTCTATGTAGAATAGTAC----TTGAGTACTGAGTACAGTATGTTCTCGGTAATGAGTACATATGTTACTGTAATGAGTACATATGTTCTCAGTAATGATAAACA-GAATA- i saiBol1.JH378125 I 2 I 1 s cebCap1.NW_016107467v1 255464 321 - 4835464 -TTTTTTGTATTTCAAATTTAT-ATTATTTATTATTTaagagtatatg------------------atttggagtcagagtaaaattgagtccacacttcaactgtgtaatttcatagctgtttgttcttag-aaaaattccttaatgcttcagatattcaaat-tctttctcattgataaaatgaagacagtaata----------------TTAGGAAAAATAAATGAAGTTAGATATTTTGATAAATGTACTATATGTAGAATACTAC----CTAAGTACTGAGTACAGTATGTTCTCGGTAATTAGTACATATGTTACTGTAATGAGTACATATGTTCTCAGTAATGATAAACA-GAATA- i cebCap1.NW_016107467v1 I 2 I 1 s aotNan1.NW_018502033v1 3714351 322 + 4093027 TTTTTTTGTATTTCAAATTTCT-ATTATTTATTATTTaagagtgtatg------------------atttggagtcagagtaaaattgagtccacacttcaactctttaatttcacagctgtttgttcttag-aaaaattccttaatatttcagatattcaaat-tcattctcattgataaaatgaagacagtgatG----------------TTAGGAAAAATAAATGAAGTTAGATATTTTGACAAATGTACTATATGTAGAATagtac----ctgagtactgagtacagtatgttctcggtaatgagtacATATGTTACTGTAATGCGTACATATGTTCTCAGTAACGATAAACA-GAATA- i aotNan1.NW_018502033v1 I 2 I 1 s micMur3.chr32 1606733 290 - 9149476 GATTTTTGGATTTCAAATTTCT-ATTATTTATTATttaagagtgtgca------------------atttggagtcaggataaaaatgaatccacatcccaactctgtagttttataactatgtgttcttaa-aaaaattccttaatgtttcagatcctcacat-tttatgccattggaaaaatagagacagtaatatctatctcatgccatattaggggaattaagcaaaattagatattatgataaatgtactatatttataatagtacatttctg----------------------------------------------------gttgctatgtgctcactaatgttAAACA-GAATA- i micMur3.chr32 C 0 I 1 s proCoq1.NW_012148064v1 587598 289 + 2414909 GATTTTTGTATTTCAGATTTCC-ATTATTTATTATTTaagagtatgtg------------------atttggagtcaggataaaaatgaatccacatctcaactc-gtaattgtatagctatgtgtccttag-caaaattccttaatgtttcagatcctcaaat-tttatcccattggaaaaatagagccaataatatctatctcatgcaatattagaggaattaagtaagattagatattatgataaatgtactatatttagaatagtacatttctg----------------------------------------------------gttcatatgtgctcactaatgataAACA-GAATA- i proCoq1.NW_012148064v1 C 0 I 1 s otoGar3.GL873534 11053780 271 + 30473821 GATTTTTATATTTCAAATTTC----TATTTATTATTTAAGagcatgtgatttggagccagggtaaaatttggagccagggtaaaattgagtccatatctcaactctttacttttataactatgtgtcctcag-aaaaattccttactgtttcagattttcaaat-gttatctatgtgaatcagtagaaacggtagtatctatctc---ctacagtagggtaattaagtaaaatcaga-----------------gatatctagaataagac----ctg----------------------------------------------------gtacataCATGTCCAATAAT-----------ATA- i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45758175 224 - 149736546 GATTTTTGTATTTCTAGTTTCC-ACTATT-------------------------------------A----GAGTCAGTGCAAAACTGAG--------------------TTTAACAGT------------G-GAAAAGTCTGTAATGTTTTGCAACCTCATTTGTTTTTCTCATTAAGGAAATAAAGAC--CAAATTCCA--TCATGAAATCTTGGAGTAATTAAAT---TCTACACTATATGGAAAATGTATACTAGTTAAATTGTTGT----CTG----------------------------------------------------TTTC-TAT-TGCTCACTAATGGCAAAAATGAATA- i mm10.chr6 C 0 I 52 s canFam3.chr20 16592523 285 + 58134056 GATATTTGTATTTCAAATTTCTAATTATTTCTTATTTTagggtgtgtg------------------attttgtgccaggataaaactaagtccacatttcaactctataatctc-tagctatgcgtctttggaaaaaattccttaatgtttctgatcttcaaatttcactctcatcacgaaaataaagacagtaatatctacctcatacaatattgggaggattaaataaaattagatattatgataaa--tactatatttaaaatagcac----ctg----------------------------------------------------gtacataagtg-tcaataatagtaAACA-GAATT- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1784593 273 - 2187301 GATTTTTGTATTTCAAATTTCT-ATTATTTAATATTTGagattacgtg------------------attcagaatcagaataaaattaagtccaaatctcttctctgtaattt-----------gtctttgg-aaaaattccttaatatttttgatcttgaagt-attttctcatcattaaaatagagacagcaatatctacctcaaactgcttaggg--aattaaataaaattggatattaagacaaatgtactatgtttgctatactgc----ttg----------------------------------------------------gtacatgggtactcaataatggtaAACA-GAATA- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17053 631 + 631505 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646039 343 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 166190 1077 + 958716 I a score=35800.000000 s hg38.chrUn_KI270749v1 101989 2 + 158759 TT s panTro5.chr3 201989210 2 - 202621043 TT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757230 2 - 205426864 TT i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69646382 2 + 202140232 TT i ponAbe2.chr3 I 343 I 3071 s nomLeu3.chr21 67574046 2 + 86207423 TT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057080 2 + 204787373 TT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60988925 2 - 192460366 TT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11100891 2 - 17224310 TT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413049 2 - 41321030 TT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484511 2 - 101219884 TT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870499 2 - 924385 TT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6712875 2 - 10587913 TT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46046751 2 - 98464013 TT i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27718396 2 + 27742158 TT i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 255786 2 - 4835464 TT i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3714674 2 + 4093027 TT i aotNan1.NW_018502033v1 I 1 C 0 s micMur3.chr32 1607024 2 - 9149476 TT i micMur3.chr32 I 1 C 0 s proCoq1.NW_012148064v1 587888 2 + 2414909 TT i proCoq1.NW_012148064v1 I 1 C 0 s otoGar3.GL873534 11054052 2 + 30473821 TT i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16592808 1 + 58134056 -T i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1784866 2 - 2187301 TT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17053 631 + 631505 I e mm10.chr6 45758399 52 - 149736546 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 166190 1077 + 958716 I a score=988182.000000 s hg38.chrUn_KI270749v1 101991 79 + 158759 TCCCACATCTATTTTCAATAATAATGACCATA-ATAGACAGAAATTTTTCATTTACTTGCAGTG------ACCTTAAAAAACTAAA s panTro5.chr3 201989212 79 - 202621043 TCCCACATCTATTTTCAATAGTAATGACCATA-ATAGACAGAAATTTTTCATTTACTTGCAATG------ACCTTAAAAAACTAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757232 79 - 205426864 TCCCACATCTATTTTCAATAGTAATGACCATA-ATAGACAGAAATTTTTCATTTACTTGCAATG------ACCTTAAAAAACTAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574048 78 + 86207423 TCCTACATCTATTTTCAATAGTAATGACCACA-ATAGACAGAAATTTTTCAGTTACTTGCAATG------ACCTT-AAAAACTAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057082 79 + 204787373 TCCCACATCTATTTTCAATAGTAATGACCACA-ACAGACAGAAGTTTTTCACTTACTTGGTATG------ACCTTAAAAAACGAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60988927 79 - 192460366 TCCCACATCTATTTTCAATAGTAATGACCACA-ACAGACAGAAGTTTTTCACTTACTTGGTATG------ACCTTAAAAAACTAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11100893 79 - 17224310 TCCCACATCTATTTTCAATAGTAATGACCATA-ACAGACAGAAGTTTTTCACTTACTTGGTATG------ACCTTAAAAAACTAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413051 79 - 41321030 TCCCACATCTGTTTTCAATAGTAATGACCATA-ACAGACAGAAGTTTTTCATTTACTTGGTATG------ACCTTAAAAAACTAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484513 79 - 101219884 TCCCATATCTATTTTCAATAGTAATGACCATA-ACAGACAGAAGTTTTTCATTTACTTGGTATG------ACCTTAAAAAACTAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870501 79 - 924385 TCCCACATCTATTTTCAATAGTAATGACCATA-ACAGACAGAAGTTTTTCATTTACTTGGTATG------ACCTTAAAAAACTACA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6712877 79 - 10587913 TCCCACATCTATTTTCAATAGTAACGACCATA-ATAGACAGAAGTTTTTCATTTACTTGGTATG------ACCTTAAAAAACTAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46046753 79 - 98464013 TCTCACATCTATTTTCAATAGTCATGACCATA-ATAGATAAAAGTTTTTCATTTATTTGGAATG------ACCTTAAAAAACTAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27718398 79 + 27742158 TCCCACATCCATTTTCAATAGTAATGACCATA-ATAGACAAAAGTTTTTCATTTACTTGCAATG------ACCTTAAAAAACTAAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 255788 79 - 4835464 TCCCACATCCATTTTCAATAGTAATGACCATA-GTAGACAAAAGTATTTCATTTACTTACAATG------ACCTTAAAAAACTAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3714676 78 + 4093027 TCCCACATCTATTTTCAATAGTAATGACCATA-ATAGATAAAA-TTTTTCATTTACTTAGAATG------ACCTTAAAAAACTAAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1607026 79 - 9149476 TCCCACATCTATTTTTGGTGGTAATGACCATA-ATAGAGAGAAGTTTCTAATTTACTTAGAATG------ACCTTAAACAACTAAA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 587890 79 + 2414909 TCCCACATCTATTTTCAATAGTAATGACCATA-ATAGAGAGAAGTTTCTAATTTACTTGGAACG------ACCTTAAAAAACTAAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11054054 68 + 30473821 TCTCACA-----------TAGTAATGACCACA-ATGGGGAGAAGATTCCAGCTTACGTGGAATG------ACCTTTATGAACTAAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45758451 70 - 149736546 TTCTACA-----TTTCTACAACTATAGTCATA-GTAGATA----TTTCTAATCTACTAGAAATG------GCATTAAAAAgataaa i mm10.chr6 I 52 I 1069 s canFam3.chr20 16592810 77 + 58134056 TCCTACATTTACTT------GCAATGAACTTATAAAGAAAAAA---TGTAATCTACGTGGAATATGTAATAAATGAAATAAATGAA i canFam3.chr20 I 1 I 2 s dasNov3.JH563077 1784868 76 - 2187301 TCCCACATCCATTTTGAAAACTAATGACCACA-ATA---AAGAGTGTTTAATTTATGTAGAATG------ACAGATAATGTCTAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17053 631 + 631505 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 166190 1077 + 958716 I a score=246500.000000 s hg38.chrUn_KI270749v1 102070 22 + 158759 TTCAACATAATGCCACCTCTAG s panTro5.chr3 201989291 22 - 202621043 TTCAACATAATGCCACCTCTAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757311 22 - 205426864 TTCAACATAATGCCACCTCTGG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574126 22 + 86207423 TTCACCATAATGCCACCACTAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057161 22 + 204787373 TTCAACATAATGCCACCTCTAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989006 22 - 192460366 TTCAACATAATGCCACCTCTAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11100972 22 - 17224310 TTCAACATAATGCCACCTCTAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413130 22 - 41321030 TTCAACATAATGCCACCTCTAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484592 22 - 101219884 TTCAACATAATGCCACCTCTAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870580 22 - 924385 TTCAACATAATGCCACCTCTAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6712956 22 - 10587913 TTCAACATAATGCCACCTCTAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46046832 22 - 98464013 CTCAACATAATGCGACTTCTAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27718477 22 + 27742158 TTCAATGTAATGCGACTTCTAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 255867 22 - 4835464 TTCAATATAATGCAACTTTTAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3714754 22 + 4093027 TTCAACATAATGCGACTTCTAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1607105 18 - 9149476 TTCAACACAAC----CTTCTAG i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 587969 18 + 2414909 TTCAACATAAC----CTTCCAT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11054122 18 + 30473821 TTCATCATACT----CTTCTAG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16592889 22 + 58134056 TTGAATGTGATATCCTTTCCAG i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1784944 22 - 2187301 TTCAACATGATATCCTTTCTAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17053 631 + 631505 I e mm10.chr6 45758521 1069 - 149736546 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 166190 1077 + 958716 I a score=2081552.000000 s hg38.chrUn_KI270749v1 102092 169 + 158759 AAAGAAGTCCATTAATAGTGGACAAATGTCTACAAAATATAACTTACATAAAAAGAAGTAAGAGATAATAAAACAAATGGGGTGAAACACCAAGACAGTTAAAAGTATTTGTCTT-------------TATGACT----------TGCCCATTTGAGC-AGAAATTCTTTTCTGGATGTCAGAATGTAAGGAA s panTro5.chr3 201989313 169 - 202621043 AAAGAAGTCCATTAATAGTGGACAAATGTCTACTAAATATAACTTACATAAAAAGAAGTAAGAGATAATAAAACAAATGGGGTGAAACACCAAGACAGTTAAAAGTATTTGTCTT-------------TATGACT----------TGCCCATTTGAGC-AGAAATTCTTTTCTGGATGTCAGAATGTAAGGAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757333 169 - 205426864 AAAGAAGTCCATTAATAGTGGACAAATGTCTACTAAATATAACTTACATAAAAAGAAGTAAGAGATAATAAAACAAATGGGGTGAAACACCAAGACAGTTAAAAGTATTTGTCTT-------------TATGACT----------TGCCCATTTGAGC-AGAAATTCTTTTCTGGATGTCAGAATGTAAGGAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574148 170 + 86207423 AAAGAAGTCCGTTAATAGTGGACAAATGTCTACTACGTGTAACTTACATAAAAAGCAGTAAGAGATAATAAAACAAATGGGGTGAAACACCAAGACAGTTAAAAGTATTTGTCTT-------------TATGACT----------TGCCCATTTGAGCAAGAAATTCTTTTCTGGATGTCAGAATGTAAGGAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057183 169 + 204787373 AAAGAAGTACATTCATAGTGGACAAATGTCTACTAAGTATAACTGACATAAAAGGCAGTAAGAGATAACAAAACAAATGGGGTGAAACACCAAGACAGTTAAAA-TATTTGTCTT-------------TATGACT----------TGCCTATTTGAGCAAGAAATTATTTTCTGGATGTCAGTATGTAAGGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989028 169 - 192460366 AAAGAAGTACATTAATAGTGGACAAATGTCTACTAAGTATAACTGACATAAAAGGCAGTAAGAGATAATAAAACAAATGGGGTGAAACACCAAGACAGTTAAAA-TATTTGTCTT-------------TATGACT----------TGCCTATTTGAGCAAGAAATTATTTTCTGGATGTCAGTATGTAAGGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11100994 169 - 17224310 AAAGAAGTACATTAATAGTGGACAAATGTCTACTAAGTATAACTGACATAAAAGGCAGTAAGAGATAATAAAACAAATGGGGTAAAACACCAAGACAGTTAAAA-TATTTGTCTT-------------TATGACT----------TGCCTATTTGAGCAAGAAATTATTTTCTGGATGTCAGTATGTAAGGAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413152 170 - 41321030 AAACAAGTACATTAATAGTGGACAAATGTCTACTAAGTATAACTGACATAAAAGGCAGTAAGAGATAATAAAACAAATGGGGTGAAACATCAAGACAGTTAAAAGTATTTGTCTT-------------TATGACT----------TGCCTATTTGAGCAAGAAATTATTTTCTGGATGTCAGTATGTAAGGAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484614 170 - 101219884 AAAGAAGTACATTAATAGTGGACAAATGTCTACTAAGTATAACTGACATAAAAAGCAATAAGAGATAATAAAACAAATGGGGTGAAACACCAAGACAGTTAAAAGTATTTGTCTT-------------TATGACT----------TGCCTATTTGAGCAAGAAATTATTTTCTGGATGTCTGTATGTAAGGAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870602 170 - 924385 AAAGAAGTACATTAATAGTGGACAAATGTCTACTAAGTATAACTGACATAAAAGGCAGTAAGAGATAATAAAACAAATGGGGTGAAACATCAAGACAGTTAAAAGTATTTGTCTT-------------TATGACT----------TGCCTATTTGAGCAAGAAATTATTTTCTGGATGTCAGTATGTAAGGAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6712978 170 - 10587913 AAAGAAGTATATTAATAGTGGACAAATGTCTACTAAGTATAACTGACATAAAAGGCAGTAAGAGAGAATGAAACAAATGGGGTGAAACACCAAGACGGTTAAAAGTATTTGTCTT-------------TATGACT----------TGCCTATTTGAACAAGGAATTATTTTCTGGATGTCAGTATGTAAGGAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46046854 167 - 98464013 AAAACAGTCCGTTAATAGTGGACAAATGTCTGCTAAGTATAACTTACATAAAA-GCAGTAAGAGACAATAAAACAAATGGAGTGAAACACCAAGACAGTTAAAACTATTTGTCTT-------------TATGACT----------TGCCCATCTGATCAAGAGAT--TCTTCTGGGTGTCAGAACGTTTGGAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27718499 167 + 27742158 AAAACAGTCCATTAATAGTGGACACATGTCTGCTAAGTATAACTTACATAAAA-GCAGTAAGAGACAATAAAACAAGTGGAGTGAAACACCAAGACAGTTAAAACTATTTGTCTT-------------TATGACT----------TGCCCATCTGAGCAAGAAAT--TCTTCTGGGTGTCAGAACGTATGGAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 255889 167 - 4835464 AAAACAGTCTGTTAATAGTGGACAAATGTCTACTAAGCATAACTTACATAAAA-GCAGTAAGAGATAATAAAACAAATGGAGTGAAACACCAAGACAGTTAAAACTATTTGTCTT-------------TATGACT----------TGCCCATGTGAGCAAGAAAT--TCTTCTGTGTGTCAGAACGTATGGAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3714776 167 + 4093027 AAAACAGTCCGTTAATAGTGGAGAAATGTCTACTAAGTATAACTTACGTAAAA-GCAGTAAGAGATAATAAAACAAATGGAGTGAAACACCAACACAGTTAAAACTATTTGTCTT-------------TATGACT----------TGCCCATCTGAGCAAGAAAT--TCTTCTGGGCGTCAGAACGTATGGAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1607123 181 - 9149476 AATGAAGTCCATTAAAAGTGGACAAGTGTCTATGAAGCATAACTCACATAGAAAGAAGTAAGAGATAATAAAACAAATGGGGCAGAACACTGTGATAGTTAAATGCATTTGTCTTCTTAGGT--TGGCTACAACT----------TGCCCATTTGAGCAAGAAATTCCTTTCTGGATATCACAATGTAAAGGA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 587987 181 + 2414909 TATGAAGTCCATTAAAAGTGGACAAGTGTCTATTAAGCATAATGCACATAGAAAGAAGTAAGAGATAATAAAACAAATGGGGTGAAACACTGAGACAGTGAAAAGCATTTGTCTTCTTACGT--CGGCTACAACT----------TGCCCATCCGAGCAAGAATTTCTTCTCTGGATGTCAGAATGTAAGGAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11054140 180 + 30473821 AAAGAAGTCCATTAAAAGTGGACAGGTGTGTACTAAGCACAACTTCCATAGAAAAAAGTAAGAGGTAATGAAACAAATGGGGTGAAACACTGAGAGAGTTACA-GTATTTGTCTTCTTATGT--TGGAAACAACT----------TGCCTTTTTGAGCAAGAAATTCTTCTCAGAATGTCAGAATATAAGAAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45759590 172 - 149736546 AGAAAAGTCTCTTAGAAACAGGCAAGTGTCAGTTAACAATATCCTGCAAAGAA--CAGCAAGAGACTAT-----AAATGGGGTGAAGCAGTGA-ACAGTTAAATATATCTGTCTT-------------TCTGTGTTAGATTCCACTGCACATTTGGGCAAGAAAGTCTTCTCCAAATGTCAGAATATGAAGAA i mm10.chr6 I 1069 C 0 s canFam3.chr20 16592911 141 + 58134056 AATGAAGCCCACTT----------------------------------------GCAATAAGAAATAATAAAACAGTTAAAATGAGACACTA--ACAGTGAAACATATTTTTCTTCCTATATAGGGGACACAACT----------TGCTCACTTGAGCATGCAATTCTTCTCAATAACTTAGACTATAAAGAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1784966 179 - 2187301 AGGTTAATCCATTAATACCTGGCAAGTGTTCATTAAGCATAA--TACACAGAAGGCAGAGAGACATAATGAAACAGATTGGGTAAAATACTGAAACAGTTGAACATATTTTTCTTCCTATTATTAGA-CAAAACT----------TGCTCATTTGAGC-AGAACCTCCTCTCTAAAAATCAAAACATAAGGAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17053 631 + 631505 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 166190 1077 + 958716 I a score=14094.000000 s hg38.chrUn_KI270749v1 102261 1 + 158759 A s panTro5.chr3 201989482 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757502 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574318 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057352 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989197 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101163 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413322 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484784 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870772 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713148 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047021 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27718666 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256056 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3714943 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 167267 1 + 958716 A i tarSyr2.KE939134v1 I 1077 I 585 s micMur3.chr32 1607304 1 - 9149476 G i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 588168 1 + 2414909 G i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11054320 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45759762 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16593052 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1785145 1 - 2187301 g i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17053 631 + 631505 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I a score=26391.000000 s hg38.chrUn_KI270749v1 102262 2 + 158759 GT s panTro5.chr3 201989483 2 - 202621043 GT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757503 2 - 205426864 GT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574319 2 + 86207423 GT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057353 2 + 204787373 GT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989198 2 - 192460366 GT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101164 2 - 17224310 GT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413323 2 - 41321030 GT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484785 2 - 101219884 GT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870773 2 - 924385 GT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713149 2 - 10587913 GT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047022 2 - 98464013 GT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27718667 2 + 27742158 GT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256057 2 - 4835464 GT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3714944 2 + 4093027 GT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1607305 2 - 9149476 GT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 588169 2 + 2414909 GT i proCoq1.NW_012148064v1 C 0 C 0 s mm10.chr6 45759763 2 - 149736546 GT i mm10.chr6 C 0 I 656 s canFam3.chr20 16593053 2 + 58134056 GT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1785146 1 - 2187301 g- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17053 631 + 631505 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I e otoGar3.GL873534 11054321 0 + 30473821 C a score=334880.000000 s hg38.chrUn_KI270749v1 102264 32 + 158759 TTAGATGAAAAATTTCAGTGGTTCAATTAGTT s panTro5.chr3 201989485 32 - 202621043 TTAGATGAAAAATTTCAGTGGTTCAATTAGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757505 32 - 205426864 TTAGATGAAAAATTTCAGTGGTTCAATTAGTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574321 32 + 86207423 TTAGATGAAAAATTTCAGTGGTTCAATTAGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057355 31 + 204787373 TTAGATGAACATTTTCAGTGGTTCAA-TAGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989200 31 - 192460366 TTAGATGAAAATTTTCAGTGGTTCAA-TAGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101166 31 - 17224310 TTAGATGAAAATTTTCAGTGGTTCAA-TAGTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413325 31 - 41321030 TTAGATGAAAATTTTCAGTGGTTCAA-TAGTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484787 31 - 101219884 TTAGATGAAAATTTTCAGTGGTTCAA-TAGTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870775 31 - 924385 TTAGATGAAAATTTTCAGTGGTTCAA-TAGTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713151 32 - 10587913 TTAGATGAAAATTTTCAGTGGTTCAATTAGTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047024 32 - 98464013 TTAGATGAAAATTTTCAGTGGTTTAATTTGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27718669 32 + 27742158 TTAGATTCAAATTTTCAGTGGTTCAGTTTGTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256059 32 - 4835464 TTAGATTAAAATTTTCAGTGGTTCAGTTTGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3714946 32 + 4093027 TTAAATGAAAATTTTCAGTGGTTCAATTTGTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1607307 31 - 9149476 TTAGACGAAAATTTTCAG-AGTTCTCTTGCCT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 588171 32 + 2414909 TTAGGTGAAAATTTTCAGCGGTTCTCTTGGCT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11054321 32 + 30473821 TTACATGGGAATTTTCAGAAGTTCGCTCGGCT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16593055 32 + 58134056 TTGGATCAAATTTTTCAGAAATTCAATTGGCT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1785147 23 - 2187301 --aaatggat-------gtggctcaaccaatt i dasNov3.JH563077 C 0 I 985 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17053 631 + 631505 I e mm10.chr6 45759765 656 - 149736546 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I a score=281139.000000 s hg38.chrUn_KI270749v1 102296 22 + 158759 ATAGATTCAGAGTTTTTGTTTA s panTro5.chr3 201989517 22 - 202621043 ATAGATTCAGAGCTTTTGTTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757537 22 - 205426864 ATAGATTCAGAGCTTTTGTTTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574353 22 + 86207423 ATAGAATCAGAGCTTTTGTTTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057386 22 + 204787373 ATAGATTCAGAGCTTTTGTTTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989231 22 - 192460366 ATAGATTCAGAGCTTTTGTTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101197 22 - 17224310 ATAGATTCAGAGCTTTTGTTTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413356 22 - 41321030 ATAGATTCAGAGCTTTTGTTTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484818 22 - 101219884 ATAGATTCAGAGCTTTTGTTTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870806 22 - 924385 ATAGATTCAGAGCTTTTGTTTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713183 22 - 10587913 ATAGATTCAGAGCTtttgttta i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047056 21 - 98464013 ATAGATTCAAAGCTTTTG-TTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27718701 22 + 27742158 ATAGATTCAGAGCTTTTGTTTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256091 22 - 4835464 ATAGATTCAGAGCTtttgttta i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3714978 22 + 4093027 ATAGATTCAGAGCTTTTGTTTA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1607338 22 - 9149476 ATAGATTCAGAGCTTTTGTTTA i micMur3.chr32 C 0 I 173 s proCoq1.NW_012148064v1 588203 22 + 2414909 ATAGATTCAGAGCTTTTGTTTA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11054353 14 + 30473821 ATGGATTCACAGCC-------- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16593087 21 + 58134056 ACAGCCTCAG-GCTTTTATTTA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17053 631 + 631505 I e mm10.chr6 45759765 656 - 149736546 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I e dasNov3.JH563077 1785170 985 - 2187301 I a score=42831.000000 s hg38.chrUn_KI270749v1 102318 3 + 158759 TTT s panTro5.chr3 201989539 3 - 202621043 TTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757559 3 - 205426864 TTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574375 3 + 86207423 TTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057408 3 + 204787373 TTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989253 3 - 192460366 TTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101219 3 - 17224310 TTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413378 3 - 41321030 TTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484840 3 - 101219884 TTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870828 3 - 924385 TTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713205 3 - 10587913 ttt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047077 3 - 98464013 TTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27718723 3 + 27742158 ATT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256113 3 - 4835464 ttt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715000 3 + 4093027 TTT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 588225 3 + 2414909 TTT i proCoq1.NW_012148064v1 C 0 I 1453 s eulMac1.LGHX01000499v1 17684 3 + 631505 TTT i eulMac1.LGHX01000499v1 I 631 I 347 s otoGar3.GL873534 11054367 3 + 30473821 TTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16593108 3 + 58134056 TTT i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e mm10.chr6 45759765 656 - 149736546 I e micMur3.chr32 1607360 173 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I e dasNov3.JH563077 1785170 985 - 2187301 I a score=1458219.000000 s hg38.chrUn_KI270749v1 102321 166 + 158759 GTTTTGTGCTCAGTTGGTTCTTGT-GTTTGTAGACATCTCTCACATTAC--------AAAAATAATAACAGAGAGAAAAGACTATGTTCTTCAAAACAAAAAGCTACTCAGTAGTGACTAGCACAGAAACCAAATCTCATGGATTATTTAAattcaatcaaatgttgttt-attga-------- s panTro5.chr3 201989542 166 - 202621043 GTTTTGTGCTCAGTTGGTTCTTGT-GTTTGTAGACATCTCTCACATTAC--------AAAAATAATAACAGAGAGAAAAGACTATGTTCTTCAAAACAAAAAGCTACTCAGTAGTGAGTGGCACAGAAACCAAATCTCATGGATTATTTAAattcagtcaaatgttgttt-attga-------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757562 166 - 205426864 GTTTTGTGCTCAGTTGGTTCTTGT-GTTTGTAGACATCTCTCACATTAC--------AAAAATAATAACAGAGAGAAAAGACTATGTTCTTCAAAACAAAAAGCTACTCAGTAGTGAGTGACACAGAAACCAAATCTCATGGATTATTTAAATTCAGTCAAATGTTGTTT-ATTGA-------- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574378 166 + 86207423 GTTTTGTGCTCAGTTGGTTCTTGT-GTTTGTAGACATCTCTCATATTAC--------AAAAATAATAACAGAGGGAAAAGACTATGTTCTTCAAAACAAAAAGCTACTCAGCAGTGAGTGGCACAGAAACCAAATCTCATGGATTATTTAAattcagtcaaatgttattt-attga-------- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057411 161 + 204787373 GTTTTGTGCTCAGTTTGTTCTTGT-GTTTGTAGACATCTCTCACATTAC--------AAAAAGAATAACAGAGAGAAAATACTATGTTCTTCAGAACAAAAAGCTAGTCGGTAGTGAGTGGCAC------CAAATCTCATGGGTTATTTAAATTCAATCGAATGTTATTTAATTGA-------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989256 161 - 192460366 GTTTTGTGCTCAGTTTGTTCTTGT-GTTTGTAGACATCTCTCACATTAC--------AAAAAGAATAACAGAGAGAAAATACTATGTTCTTCAGAACAAAAAGCTAGTCGGTAGTGAGTGGCAC------CAAATCTCATGGGTTATTTAAATTCAATCGAATGTTATTTAATTGA-------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101222 161 - 17224310 GTTTTGTGCTCAGTTTGTTCTTGT-GTTTGTAGACATCTCTCACATTAC--------AAAAAGAATAACAGAGAGAAAATACTATGTTCTTCAGAACAAAAAGCTAGTCGGTAGTGAGTGGCAC------CAAATCTCATGGGTTATTTAAATTCAATCGAATGTTATTTAATTGA-------- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413381 167 - 41321030 GTTTTGTGCTCAGTTTGTTCTTGT-GTTTGTAGACATCTCTCACATTAC--------AAAAAGAATAACAGAGAGAAAATACTATGTTCTTCAAAACAAAAAGCTACTCAGTAGTGAGTGGCACAGAAATCAAATCTCATGGATTATTTAAATTCAATCGAATGTTATTTAATTGA-------- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64484843 167 - 101219884 GTTTTGTGCTCAGTTTGTTCTTGT-ATTTGTAGACATCTCTCACATTAC--------AAAAATAATAACAGAGAGAAAATACTGTGTTCTTCAAAACAAAAAGGTAGTCGGTAGTGAGTGGCACAGAAACCAAATCTCATGGATTATTTAAATTCAATCGAATGTTATTTAATTGA-------- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870831 167 - 924385 GTTTTGTGCTCAGTTTGTTCTTGT-GTTTGTAGACATCTCTCACATTAC--------AAAAAGAATAACAGAGAGAAAATACTATGTTCTTCAAAACAAAAAGCTACTCGGTAGTGAGTGGCACAGAAACCAAATCTCATGGATTATTTAAATTCAATCGAATGTTATTTAATTGA-------- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713208 166 - 10587913 g-tttgtgctcagtttgttcttgt-gtttgtAGACATCTCTCACATTAC--------AAAAAGAATAACAGAGAGAAAATACTATGTTCTTCAAAGCAAAAAGCTACTTGGTAGTGAGTGGCACAGAAACCAAATCTCATGGATTATTTAAATTCAATCAAATGTTATTTAATTGA-------- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047080 162 - 98464013 GTTTTGTGCTCAGTGCATTCTTGT-GTTTGTACATGTCTCTTACATTAC--------AGAAAT----ACAGAGAGAAAAGACTATGTTTTTCGAAACAAAAAGCCACTCAGTAGTGAGTGGCACAGAAACCAAATCTCATGGATTATTTCAattcaatcaaatgttattt-attga-------- i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27718726 157 + 27742158 GTTTTGTGCTCAGTTTGTTCTTGT-GTTTGTAGATATCTC-----TTAC--------AGAAAT----ACAGAGAGAAAAGACTATGTTTTTCAAAACAAAAAGCTACTCAGTAGTGAGTGGCACAGAAACCAAATCTCATGGATTATTTCAattcaatcaaatgttattt-attga-------- i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 256116 162 - 4835464 gttttgtgctcagtttgttcctgt-gtttgtAGATGTCTCTTGCGTTAC--------AGAAAT----ACAGAGAGAAAAGAACATGTTTTTCAAAACAAAAAGCTACTCAGTAGTGAGTGGCACAGAAACTAAATCTCATGGATTATttcagttcaatcaaatgttattt-attga-------- i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3715003 162 + 4093027 GTTTTGTGCTCAGTTTGTTCTTGT-GTTTGTAGATGTCTCTTACATTAC--------AGAAAT----ACAGAGAGAAAGGACTATGTTTTTCAAAACAAAAAGTTACTCAGTAATAAGTGGCAAAGAAACCAAATCTCATAGATTATTtcaattcaatcaaatgttattt-attga-------- i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11054370 175 + 30473821 GTTTTGTGCTTGCTGGGTTCTTGT-GTTTATAAAAGTCTCTTCTGTTACTGACGTAAGGAAATAGTGCCAGAAAGGAAATGTTATAGACTCCCAAGCAAAGAGCTACTGAGTACCGAGTTGCATAGAAAGCGAATCTCAGAAGTTATTTTAATTAAACCAACTGTTATAttattga-------- i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16593111 158 + 58134056 GTCTCATGCTTGCTTTGATTTTGTCTTTTTTTAAAGTCTCTTATATAAC--------AGAAATAGTACCAGAGAAAAGGGGTTATGCACTTCAG-TCAAAAACTCAGATATTATT---------------TCAatttatttgtttatttatttttta-agatttttattt-atttatttattta i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17687 347 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e mm10.chr6 45759765 656 - 149736546 I e micMur3.chr32 1607360 173 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I e dasNov3.JH563077 1785170 985 - 2187301 I a score=246062.000000 s hg38.chrUn_KI270749v1 102487 22 + 158759 --------------------tatcacttatgtgccagatatt s panTro5.chr3 201989708 22 - 202621043 --------------------tatcacttatgtgtcagatatt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757728 22 - 205426864 --------------------TATCACTTATGTGTCAGATATT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574544 22 + 86207423 --------------------tatcacttatgtgtcagatatt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057572 22 + 204787373 --------------------TATCAGTTATGTGTCAGATATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989417 22 - 192460366 --------------------TATCAGTTATGTGTCAGATATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101383 22 - 17224310 --------------------TATCAGTTATGTGTCAGATATT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413548 22 - 41321030 --------------------TATCAGTTATGTGTCAGATATT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485010 22 - 101219884 --------------------TATCAGTTATGTGTCAGATATT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 870998 22 - 924385 --------------------TATCAGTTATGTGTCAGATATT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713374 22 - 10587913 --------------------TATCAGTTATGTGTCAGATATT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047243 22 - 98464013 --------------------tatcagttatttgtcaaatatt i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27718884 22 + 27742158 --------------------tatcggttatgtgtcagatatt i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 256279 22 - 4835464 --------------------tatcagttatgtgtcagatagt i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3715166 21 + 4093027 --------------------tatcagttatgtgt-agatatt i aotNan1.NW_018502033v1 I 1 C 0 s micMur3.chr32 1607533 22 - 9149476 --------------------TAACAGTGATGTGTCAGATATT i micMur3.chr32 I 173 C 0 s otoGar3.GL873534 11054546 22 + 30473821 --------------------tatcggttatgtgtcagatatt i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16593269 42 + 58134056 ttttatttatttaatcaacttacatattaagtgtcagatatt i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17687 347 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e mm10.chr6 45759765 656 - 149736546 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I e dasNov3.JH563077 1785170 985 - 2187301 I a score=1830429.000000 s hg38.chrUn_KI270749v1 102509 159 + 158759 atgggaagcattgaagataaaatagtacataaaatacacTTCTGTCTTTCTTAAAGTTCAATGATTTGTTGCCTAACTTTGAGAAATACTA-CCCTTCACCACagaataacaattcacatcagcataactaggtcttggagaagtactgcaataaagaaa s panTro5.chr3 201989730 159 - 202621043 atgggaagcattgaagataaaatagtacataaaatacacTTCTGTCTTTCTTAAAGTTCAATGATTTGTTGCCtaactttgagaaatacta-cccttcaccacagaataacaattcacatcagcataactaggtcttggagaagtactgcaataaagaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757750 159 - 205426864 ATGGGAAGCATTGAGGATAAAATAGTACATAAAATACACTTCTGTCTTTCTTAAAGTTCAATGATTTGTTGACTAACTTTGAGAAATATTA-CCCTTCACCACagaataacaattcacatcagcataactaggtcttggagaagtactgcaataaagaaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574566 159 + 86207423 atgggaggcattgaggatgaaatagtacataaaatacacTTCTGTCTTTCTTAAAGTTCAATGATTTGCTGCCTAACTTTGAGAAATACTA-CCCTTCACCACAAAATAacaattcacatcagcataactaggtcttggagaagtactgcaataaagaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057594 159 + 204787373 ATGGGCGGCATTGAGGATAAAATAATATATGAAACACACTTCTGTCTTTTTTAAAGTTCAATGATTTGTTGCCtaactttgagaaatacta-cccttcaccacagaatcacaattcacatcagtgtaactatgtctcggagaagtactgcaataaaggaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989439 159 - 192460366 ATGGGCGGCATTGAGGATAAAATAATATATGAAACACACTTCTGTCTTTTTTAAAGTTCAATGATTTGTTGCCTAACTTTGAGAAATACTA-CCCTTCACCACagaatcacaattcacatcagtgtaactatgtctcggagaagtactgcaataaaggaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101405 159 - 17224310 ATGGGCGGCATTGAGGATAAAATAATATATGAAACACACTTCTGTCTTTTTTAAAGTTCAATGATTTGTTGCCtaactttgagaaatacta-cccttcaccacagaatcacaattcacatcagtgtaactatgtcttggagaagtactgcaataaaggaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413570 159 - 41321030 ATAGGCGGCATTGAGGATAAAATAATACATGAAACACACTTCTGTCTTTTTTAAAGTTTAATGATTTATTGCCtaactttgagaaatacta-cccttcaccacagaatcacaattcacatcagcgtaactatgtctcggagaagtactgcaataaaggaa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485032 159 - 101219884 ATGGGCGGCATTGAGGATAAAATAATACATGAAACACACTTCTGTCTTTTTTAAAGTTCAATGATTTATTGCCTAACTTTGAGAAATACTA-CCCTTCACCACagaatcacaattcacatcagtgtgactatgtctcggagaagtactgcaataaaggaa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871020 159 - 924385 ATGGGCGGCATTGAGGATAAAATAATACATGAAACACACTTCTGTCTTTTTTAAAGTTCAATGATTTATTGCCtaactttgagaaatacta-cccttcaccacagaatcacaattcacatcagcgtaactatgtctcggagaagtactgcaataaaggaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713396 159 - 10587913 ATGGGCGGCATTGAGGATAAAATAATACATGAAACACACTTCTGTCTTTTTTAAAGTTCAATGATTTGTTGCCTAACTTTGAGAAATACTA-CCCTTCACCACAGAATCACAATTCACATCAGCGTAACTATGTCTTGGAGAAGTACTGCAATAAAGGAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047265 154 - 98464013 atgggcagcattgaggataaagtaatacataaaacacacttctgtctttcttaaagttcaatgATTTGCTGCCTAACTTTGAGAAATACTA-CCCTTCACCACagaataacaattcccattcgcataacta-gtctcagagaagcattgcaat----aaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27718906 156 + 27742158 atgggcagcactgaggataaagtaatacgtaaaacacacttccgtctttcttaaagtttaGTGATTTGCTGCCTAACTTTGAGAAATACTA-CACTTCACCACAG--TAacaattcccattagcataacta-gtctcagagaagcactgcaataaagaaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256301 158 - 4835464 atgggcaacatcggggataaagtaatacataaaacacacttccgtctttcttaaagttcaATGATTTGCTGCCtaactttgagaaatacta-cccttcaccacagaataacaattcccattagcataacta-gtctcagagaagcactgcaataaagaaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715187 158 + 4093027 ataggcggcattgaggataaagtaatacataaaacacacttctgtcttTCTTAAAGTTCAATGATTTGCTGCCtaactttgagaaatacta-cccttcaccacagaataacaattcccactagcataacta-gtctcagagaagcactgcaataaagaaa i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1607555 159 - 9149476 ATGAGAAGCATAGAGGATAAAATGATAGATAAAGCACATCTCTGTCTTTCCTGAAGTTCAGTACTTTGCTGCCtaactttaggaaatgcta-ccctttaccaaagaatcacaactcacatcagcgtaaataacgctctgagaagtactgcaataaagaaa i micMur3.chr32 C 0 I 1 s otoGar3.GL873534 11054568 149 + 30473821 ttgaaaggcactgaggacaaaatgataccttaaatacatttctgtcttgcataaag--------tttgctacctaacttgggaatagacTc-ccctttaccaaagactcacaactcccatcagcctgtgtaaggctctaaca--tcttacaatgaagaaa i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16593311 158 + 58134056 ataggagacactgaagataaaatggggaatagaacacacttccgtctctcccaaagttcaTTGGTTTGCTGCTTAACTTTAGAGAATACAATTCCTTGACCAAAGTGGcacaatgtacatcaatat--tcaacactctgagaagtcctgcaataaagaag i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1786155 159 - 2187301 ATGGGAAGCACTGGCAATAAAATAACTAAGAAAACACATTTTCATCTTGCCAGAAGTTTATTGGATGGCTGCCTCACAttgagaaatactg-ccttttattggagaattacaatgcacatcagcttatctaaggctctgagaagttctgcaataaagaaa i dasNov3.JH563077 I 985 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 17687 347 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e mm10.chr6 45759765 656 - 149736546 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I a score=19000.000000 s hg38.chrUn_KI270749v1 102668 1 + 158759 c s panTro5.chr3 201989889 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757909 1 - 205426864 c i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574725 1 + 86207423 c i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057753 1 + 204787373 c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989598 1 - 192460366 c i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101564 1 - 17224310 c i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413729 1 - 41321030 c i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485191 1 - 101219884 c i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871179 1 - 924385 c i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713555 1 - 10587913 C i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047419 1 - 98464013 c i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719062 1 + 27742158 c i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256459 1 - 4835464 c i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715345 1 + 4093027 c i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1607715 1 - 9149476 c i micMur3.chr32 I 1 C 0 s eulMac1.LGHX01000499v1 18034 1 + 631505 c i eulMac1.LGHX01000499v1 I 347 I 4276 s otoGar3.GL873534 11054717 1 + 30473821 c i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16593470 1 + 58134056 c i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1786314 1 - 2187301 c i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e mm10.chr6 45759765 656 - 149736546 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I a score=1222164.000000 s hg38.chrUn_KI270749v1 102669 108 + 158759 -tgtgtaacttccttatcactgagtgtctcaaacttatttg---aGGAGAGTGCTTCTTTGTGTAACATCCACAACTAATATGCTATCTAACACATTCATGTCCAAT--TTCAT s panTro5.chr3 201989890 108 - 202621043 -tgtgtaacttccttatcactgagtgtctcaaacttatttg---aGGAGAGTGCTTCTTTGTGTAACATCCACAACTAATATGCTATCTAACACATTCGTGTCCAAT--TTCAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204757910 108 - 205426864 -tgtgtaacttccttatcactgagtgtctcaaacttatttg---aGGAGAGTGCTTCTTTGTGTAACATCCACAACTAATATGCTATCTAACACATTCGTGTCCAAT--TTCAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574726 105 + 86207423 -tgtgtaacttccttatcactgagtgtctcaaacttattt------gaGATTGCTTCTTTGTGTAACATCCACAACTAATATGCTATCTAACACATTCATGTCCAAT--TTCAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057754 108 + 204787373 -tgtgtaacttccttatcactcagtgtctcaaacttatttg---aggagactgcttctttgtgtaacatccaCAACTAATATGCTATCTAACACATTCATGTCCAAT--TTCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989599 108 - 192460366 -tgtgtaacttccttatcactcagtgtctcaaacttatttg---aggagactgcttctttgtgtaacatccaCAACTAATATGCTATCTAACACATTCATGTCCAAT--TTCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101565 108 - 17224310 -tgtgtaacttccttatcactcagtgtctcaaacttatttg---aggagactgcttctttgtgtaacatccaCAACTAATATGCTATCTAACACATTCATGTCCAAT--TTCAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413730 108 - 41321030 -tgtgtaacttccttatcactcagtgtctcatacttatttg---aggagactgcttctttgtgtaacatccaCAACTAATATGCTATCTAACACAATCATGTCCAAT--TTCAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485192 108 - 101219884 -tgtgtaacttccttatcactcagtgtctcaaacttatttg---aggagactgcttctttgtgtaacatccaCAACTAATATGCTATCTAACACATTCATGTCCAAT--TTCAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871180 108 - 924385 -tgtgtaacttccttatcactcagtgtctcatacttatttg---aggagactgcttctttgtgtaacatccaCAACTAATATGCTATCTAACACATTCATGTCCAAT--TTCAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713556 108 - 10587913 -TGTGTAACGTCCTTATCACTCAGTGTCTCAAACATATTTG---AGGCGACTGCTTCTTTGTGTAACATCCACAAGTAATACGCTACCTAACACATTCATGTCCAAT--TTCAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047420 108 - 98464013 -tatttaacttacttatcactgagtgactcaaacttatttg---agaagattgcttctttgtgtaacatctaCAACTAATACGCGACCTAACACATTCATGTCCAAT--TTCAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719063 108 + 27742158 -tatttaacttacttatcactgagtgactcaaacttatttg---aGAAGATTGCTTCTTTGTGTAACATGTACAACTAATATACTACCTAACACGTTCATGTCCAGT--TTCAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256460 108 - 4835464 -tatttaacttacttatcactgagtgactcaaacttatttg---aGAAGATTGCTTCTTTGTGTAACATGTGCAAGTAATACGCTACCTAATGCATTCATGTCCAAT--TTCAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715346 108 + 4093027 -tatttaacttacttatcactgagtgactcaaactcatttg---agaagattgcttctttgtgtaacatctacaattaatatgctacCTAACACATTCATGTCCGAT--TTCAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1607716 105 - 9149476 -tgtttaacttccttatta---tgcttctcaaacatatttg---atgagactcttcctttgtgtaacatctatAATTAATATGGCACCTAACATATTCATGTCCAAT--TTCAT i micMur3.chr32 C 0 I 268 s otoGar3.GL873534 11054719 105 + 30473821 -tgtttaacttccttatta---ggcctctcaaacatatttg---atgagactccttcttcgggtaacatctaCAACTAATACGGAACCTAACACATTCACGTCCAGT--TTCAC i otoGar3.GL873534 I 1 I 19 s canFam3.chr20 16593471 100 + 58134056 -tatttgacttcctaatcactgagta--tcaaacctacttggcaatgagactcttcctttgtctaacatctaCAACTGATGTGC-----------TTCATGTTCATTCATTCAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1786315 107 - 2187301 ctatttttcttgatt-tcactgtgtctctccaatttatttt---acaatgatac-cctttATGTAAGCTTTACAACTTATGTGCTATCTAAGCTATTCCTGTCTCAT--TTTAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e mm10.chr6 45759765 656 - 149736546 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I a score=84254.000000 s hg38.chrUn_KI270749v1 102777 8 + 158759 CATATCCT s panTro5.chr3 201989998 8 - 202621043 CATATCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758018 8 - 205426864 CATATCCT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574831 8 + 86207423 CATATCCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057862 8 + 204787373 TGTATCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989707 8 - 192460366 TGTATCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101673 8 - 17224310 TGTATCCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413838 8 - 41321030 TGTATCCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485300 8 - 101219884 TGTATCCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871288 8 - 924385 TGTATCCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713664 8 - 10587913 TGTATCCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047528 8 - 98464013 TGGGTCCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719171 8 + 27742158 TGTATCCT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256568 8 - 4835464 TGTATCCT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715454 8 + 4093027 TGTATCCT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11054843 8 + 30473821 TTAATCCT i otoGar3.GL873534 I 19 I 175 s canFam3.chr20 16593571 8 + 58134056 TTTATCCT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1786422 8 - 2187301 TTTATCCT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e mm10.chr6 45759765 656 - 149736546 I e micMur3.chr32 1607821 268 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I a score=21877.000000 s hg38.chrUn_KI270749v1 102785 2 + 158759 AT s panTro5.chr3 201990006 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758026 2 - 205426864 AT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574839 2 + 86207423 AT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057870 2 + 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989715 2 - 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101681 2 - 17224310 AT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413846 2 - 41321030 AT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485308 2 - 101219884 AT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871296 2 - 924385 AT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713672 2 - 10587913 AT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047536 2 - 98464013 AT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719179 2 + 27742158 AT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256576 2 - 4835464 GT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715462 2 + 4093027 AT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11055026 2 + 30473821 AT i otoGar3.GL873534 I 175 C 0 s canFam3.chr20 16593579 2 + 58134056 AC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1786430 2 - 2187301 AC i dasNov3.JH563077 C 0 I 4731 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e mm10.chr6 45759765 656 - 149736546 I e micMur3.chr32 1607821 268 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I a score=48028.000000 s hg38.chrUn_KI270749v1 102787 4 + 158759 CTCC s panTro5.chr3 201990008 4 - 202621043 CTCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758028 4 - 205426864 CTCC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574841 4 + 86207423 CTGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057872 4 + 204787373 CTCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989717 4 - 192460366 CTCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101683 4 - 17224310 CTCC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413848 4 - 41321030 CTCC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485310 4 - 101219884 CTCC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871298 4 - 924385 CTCC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713674 4 - 10587913 CTCC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047538 4 - 98464013 CTCC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719181 4 + 27742158 CTCC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256578 4 - 4835464 CTCC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715464 4 + 4093027 CTCC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11055028 4 + 30473821 TTCC i otoGar3.GL873534 C 0 I 61 s canFam3.chr20 16593581 4 + 58134056 ATCC i canFam3.chr20 C 0 I 233 s dasNov3.JH563077 1791163 4 - 2187301 CTCT i dasNov3.JH563077 I 4731 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e mm10.chr6 45759765 656 - 149736546 I e micMur3.chr32 1607821 268 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I a score=917789.000000 s hg38.chrUn_KI270749v1 102791 68 + 158759 ACTGATTAGAGATCCTTCAAGTAACCCTGAGGTTATGTGCTTTACGTATTTGGCTTCTGACTAAGCAT s panTro5.chr3 201990012 68 - 202621043 ACTGATTAGAGATCCTTCAAGTAACCCTGAGGTTATGTGCTTTACGTATTTGGCTTCTGACTAAGCGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758032 68 - 205426864 ACTGATTAGAGATCCTTCAAGTAACCCTGAGGTTATGTGCTTTACGTATTTGGCTTCTGACTAAGCAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574845 68 + 86207423 ACTGATTAGAGATCCTTCAAGTAACTCTGAGGTTATGTGCTTTATGTATTTGGCTTCTGACTAAGCAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057876 68 + 204787373 ACTGATTAGAGATCCTTCAagtaaccctgaggttatttgctttatatatttggcttctgactaagcat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989721 68 - 192460366 ACTGATTAGAGATCCTTCAagtaaccctgaggttatttgctttatatatttggcttctgactaagcat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101687 68 - 17224310 ACTGATTAGAGATCCTTCAagtaaccctgaggttatttgctttatatatttggcttctgactaagcat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413852 68 - 41321030 ACTGATTAGAGATCCTTCAagtaaccctgaggttatttgctttatatatttggcttctgactaagcat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485314 68 - 101219884 ACTGATTAGAGATCCTTCAagtaaccctgaggttatttgctttatatatttggcttctgactaagcat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871302 68 - 924385 ACTGATTAGAGATCCTTCAagtaaccctgaggttatttgctttatatatttggcttctgactaagcat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713678 68 - 10587913 ACTGATTAGAGATCCTTCAagtaaccctgaggttatttgctttatatatttggcttctgactaagcat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047542 68 - 98464013 ACTGATTAGAGAGACTTCAAGTAACCCTGAGGTTATGTGCTTTATGTACTTGGCTTCTGACTAAGCAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719185 68 + 27742158 ACTGATTAGAGAGACTTCAAGTAACGCTGAGGTTATGTGCTTTATGTATCTGGCTTCTGACTAAGCAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256582 66 - 4835464 ACTGATT--AGAGACTTCAAGTAACTCTGAGGTTATGTGCTTTATGTATTTGGCTTCTGACTAAGCAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715468 68 + 4093027 ATTGATTAAAGAGACTTCAAGTAACCCTGAGGTTATGTGCTTTATGTACTTGGCTTCTGACTAAGCAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1608089 68 - 9149476 ACTGATTAGAGCTTTTTCAAGTAACCCTGAAGTTGTGTGCTTTATGTATTTGTCTTCTAACTAAACAT i micMur3.chr32 I 268 I 171 s otoGar3.GL873534 11055093 68 + 30473821 AGTGATTAGAGCTTTTTCAAGCAACCCTGAGGTGATGCGCTTTCCCTGTTTGGCTTCTGACTAAGCAT i otoGar3.GL873534 I 61 C 0 s mm10.chr6 45760421 60 - 149736546 ACTGTTAAGAAATTCTTGATGTAATTCTGAGGTTATTTG--------ATGTGCTTTATGAATAAGCAA i mm10.chr6 I 656 C 0 s canFam3.chr20 16593818 68 + 58134056 ACTGATTAGAGCTCCTCCAAGTAACCCTAAACttacctgctttacatatctggcttctaagtaagcag i canFam3.chr20 I 233 C 0 s dasNov3.JH563077 1791167 68 - 2187301 ATTTTTTGGAGCTCCTTCAGATAACTCTGAGATTCTGTGCTTTACATATTTGGGTTCTGAGTAACTAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I a score=936096.000000 s hg38.chrUn_KI270749v1 102859 91 + 158759 TGATTTAGAGATCAGTTTTCTC--AGCAAAACTGACTTTG-AAAACCACAAGCA-AGAACTATAACCTTTGATCTTCAC-AGGCATATGTTGAGGG s panTro5.chr3 201990080 90 - 202621043 TGACTTACAGATCAGTTTTCTC--AGCAAAACTGACTTTG-AAAACCACAAGCA-AGAACTATAACCTTTGATCTTCAC-AGGCATATG-TGAGGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758100 90 - 205426864 TGATTTAGAGATCAGTTTTCTC--AGCAAAACTGACTTTG-AAAACCACAAGCA-AGAACTATAACCTTTGATCTTCAC-AGGCATATG-TGAGGG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67574913 90 + 86207423 TGATTTAGAGATCAGTTTTCTC--AGCAAAACTGACTTTG-AAAACCACAAGCA-AGAACTATAACCTTTGATCTTCAC-AGGCATATG-TGAGGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66057944 89 + 204787373 tgatttaga-atcagttttctc--aacaaaactgactttg-aaaaccacAAGCA-ACAACTATCACCTTTGATCTTCAC-AGGCATATG-TGAGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989789 89 - 192460366 tgatttaga-atcagttttctc--aacaaaactgactttg-aaaaccacAAGCA-ACAACTATCACCTTTGATCTTCAC-AGGCATATG-TGAGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101755 89 - 17224310 tgatttaga-atcagttttctc--aacaaaactgactttg-aaaaccacAAGCA-ACAACTATCACCTTTGATCTTCAC-AGGCATATG-TGAGGG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17413920 90 - 41321030 tgatttagagatcagttttctc--aacaaaactgactttg-aaaaccacAAGCA-AGAACTATCACCTTTGATCTTCAC-AGGCATATG-TGAGGG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485382 90 - 101219884 tgatttagagatcagttttctc--aacaaaactgactttg-aaaaccacAAGCA-AGAACTATCACCTGTGATCTTCAC-AGGCATATG-TGAGGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871370 90 - 924385 tgatttagagatcagttttctc--aacaaaactgactttg-aaaaccacAAGCA-AGAACTATCACCTTTGATCTTCAC-AGGCATATG-TGAGGG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713746 90 - 10587913 tgatttagagatcagttttctc--aacaaaactgactttg-aaaaccacAAGCA-AGAGCTATCACCTTTGATCTTCAC-AGGCATATG-TGAGGG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047610 90 - 98464013 GGATTTAGAGATCAGTTTTCTC--AACAAAAATGACTTTG-AAAACCACAAGCA-AGAATTATAACCTTTGATCTTCAC-AGGCATATA-TGaggg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719253 90 + 27742158 GGATTTAGAGATCAGTTTTCTC--AACAAAAATGACTTTG-AAAACCACAAGCA-AGAATTATAACCTCTGATCTTCAC-AGGCATATG-TGAGGG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256648 90 - 4835464 GGATTTAGAGATCAGTTTTCTC--AACAAAAATGACTTTG-AAAACCACAAGCA-AGAATTATAACCTTTGATCTTCAC-AGGCATATG-TGAGGG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715536 90 + 4093027 GGATTTAGAGATCAGTTTTCTC--AACAAAAATGACTTTG-AAAACCACAAGCA-AGAATTATAACCTTTGATCTTCAC-AGGCATATG-TGAGGG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11055161 84 + 30473821 TGATTTAAAGAATGGGTTTCTC--AGCAGAAATAATGTTGAAAAACTACAAGC--------GCATCCTCTGATCTTCAC-AGGACACCG-AGAAGG i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45760481 93 - 149736546 TGATTTAAAGACTGAAAATCTCAGAATAAAAAGGATTTTG-AATAACAAAACCACATAATAAAATCCTTGGATCCTCATAAGACCTATG-GAAGA- i mm10.chr6 C 0 I 1 s canFam3.chr20 16593886 89 + 58134056 tgatttaaagaatgagtgtctg----ccaaaatgactttg-aaaaccacAAGCA-TGTATTTTATCCTTTGAACTGCATGAAATGCATG-TGAGAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1791235 88 - 2187301 TGATTTAAAAAATGTGTTGTTC--AGCCAAAATGACTTT--AAAACCACCAGAA-TATATTACCTCTTTTGAA-GTAAC-ATGGATATG-TTAAGC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e micMur3.chr32 1608157 171 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167268 585 + 958716 I a score=11879.000000 s hg38.chrUn_KI270749v1 102950 2 + 158759 AA s panTro5.chr3 201990170 2 - 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758190 2 - 205426864 AA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575003 2 + 86207423 AA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058033 2 + 204787373 AA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989878 2 - 192460366 AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101844 2 - 17224310 AA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414010 2 - 41321030 AA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485472 2 - 101219884 AA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871460 2 - 924385 AA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713836 2 - 10587913 AA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047700 2 - 98464013 ag i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719343 2 + 27742158 AG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256738 2 - 4835464 AG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715626 2 + 4093027 AG i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 167853 2 + 958716 AG i tarSyr2.KE939134v1 I 585 I 3892 s otoGar3.GL873534 11055246 2 + 30473821 GG i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45760575 1 - 149736546 A- i mm10.chr6 I 1 I 1 s canFam3.chr20 16593975 2 + 58134056 AG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1791323 2 - 2187301 AG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e micMur3.chr32 1608157 171 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I a score=293733.000000 s hg38.chrUn_KI270749v1 102952 23 + 158759 ACAAATGACTGGCATGAGGTTGT s panTro5.chr3 201990172 23 - 202621043 AGAAATGACTGGCATGAGGTTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758192 23 - 205426864 ACAAATGACTGGCATGAGGTTGT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575005 23 + 86207423 ACAAATGACTGGCATGAGGTTGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058035 23 + 204787373 ATAAATGACTGGCATGAGGTTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989880 23 - 192460366 ATAAATGACTGGCATGAGGTTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101846 23 - 17224310 GTAAATGACTGGCATGAGGTTGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414012 23 - 41321030 ATAAATGACTGTCATGAGGTTGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485474 23 - 101219884 ATAAATGACTGGCATGAGGTTGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871462 23 - 924385 ATAAATGACTGTCATGAGGTTGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713838 23 - 10587913 ACAAATGACTGGCATGAGGTTGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047702 23 - 98464013 acaaatgactggcatgaggttgt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719345 23 + 27742158 ACAAATGACTGGCATGAGGTTGC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256740 23 - 4835464 ACAAATGACTGGCATGAGGTTGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715628 23 + 4093027 ACAAATGACTGGCATGAGGTTGT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11055248 23 + 30473821 ACAAATGATTGGCAGGAAGTCAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45760577 22 - 149736546 ACATA-GACTGGAATGAGGTTGT i mm10.chr6 I 1 I 1097 s canFam3.chr20 16593977 23 + 58134056 GCAAATGACTGGCATGGGATCAC i canFam3.chr20 C 0 I 8 s dasNov3.JH563077 1791325 23 - 2187301 ACAAATGATTGGCATCAGATCAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e micMur3.chr32 1608157 171 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=54318.000000 s hg38.chrUn_KI270749v1 102975 5 + 158759 GCAGC s panTro5.chr3 201990195 5 - 202621043 GCAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758215 5 - 205426864 GCAGC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575028 5 + 86207423 GCAGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058058 5 + 204787373 GCAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989903 5 - 192460366 GCAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101869 5 - 17224310 GCAGC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414035 5 - 41321030 GCAGC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485497 5 - 101219884 GCAGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871485 5 - 924385 GCAGC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713861 5 - 10587913 GCAGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047725 5 - 98464013 gcagc i calJac3.chr15 C 0 I 7 s saiBol1.JH378125 27719368 5 + 27742158 GCAGC i saiBol1.JH378125 C 0 I 7 s cebCap1.NW_016107467v1 256763 5 - 4835464 GCAGC i cebCap1.NW_016107467v1 C 0 I 7 s aotNan1.NW_018502033v1 3715651 5 + 4093027 GCAGC i aotNan1.NW_018502033v1 C 0 I 7 s otoGar3.GL873534 11055271 5 + 30473821 GCAGC i otoGar3.GL873534 C 0 I 7 s canFam3.chr20 16594008 4 + 58134056 AAAG- i canFam3.chr20 I 8 C 0 s dasNov3.JH563077 1791348 5 - 2187301 GTACC i dasNov3.JH563077 C 0 I 7 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e mm10.chr6 45760599 1097 - 149736546 I e micMur3.chr32 1608157 171 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=337561.000000 s hg38.chrUn_KI270749v1 102980 34 + 158759 TGGTGAATTTGAAACTCAACCATATGAGTAAAAA s panTro5.chr3 201990200 34 - 202621043 TGGTGAATTTGAAACTTAACCATATGAGTAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758220 34 - 205426864 TGGTGAATTTGAAACTCAACCATATGAGTAAAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575033 34 + 86207423 TGGTGAATTTGAAACTCAACCATATGAGTAAAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058063 34 + 204787373 TGGTGAATTTGAGACTCAACCATATGAGTAAAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989908 34 - 192460366 TGGTGAATTTGAGACTCAACCATATGAGTAAAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101874 34 - 17224310 TGGTGAATTTGAGACTCAACCATATGAGTAAAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414040 34 - 41321030 TGGTGAATTTAAGACTCAACCATATGAGTAAAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485502 34 - 101219884 TGGTGAATTTGAGACTCAACCATATGAGTAAAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871490 34 - 924385 TGGTGAATTTGAGACTCAACCATATGAGTAAAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713866 34 - 10587913 TGGTGAATTTGAGACTCAACCATATGAGTAAAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047737 34 - 98464013 tggtgaatttaagactgaacccTGTGGGTAAAAA i calJac3.chr15 I 7 C 0 s saiBol1.JH378125 27719380 34 + 27742158 TGGTGAATCTGAAACTGAACCCTGTGGGTGAAAA i saiBol1.JH378125 I 7 C 0 s cebCap1.NW_016107467v1 256775 34 - 4835464 TGGTGAATTTGAAACTGAACCCTGTGCGTAGAAA i cebCap1.NW_016107467v1 I 7 C 0 s aotNan1.NW_018502033v1 3715663 34 + 4093027 TGGTGAATTTGAAACTGAATCCTGTGGGTAAAAA i aotNan1.NW_018502033v1 I 7 C 0 s otoGar3.GL873534 11055283 33 + 30473821 CGGCAGACTCGGAAGTCAGCTCTGTGGACGAAG- i otoGar3.GL873534 I 7 C 0 s mm10.chr6 45761696 28 - 149736546 TGTTCAACTTGAGACTCAA------GTCTGAAAA i mm10.chr6 I 1097 I 3 s canFam3.chr20 16594012 33 + 58134056 TGGTGGATTTGGAACTCAACCCTATGAAAAAAA- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1791360 33 - 2187301 TGGTATATTTATAACTAAATGCCATGGATGAAG- i dasNov3.JH563077 I 7 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e micMur3.chr32 1608157 171 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=1653777.000000 s hg38.chrUn_KI270749v1 103014 152 + 158759 CAATTTGAGTAAGACACAATGAATTTAGACTTCATTTATTCTCATTTTGAAATAATTTGCAAAAGTGTTAGGC-----TAAGGATTTATATTTTCATTACCTATGAGGAAATAAAG-CAAACAAATTTGGACCAAAACT----------ACAAAAACTAAAGAATTCA s panTro5.chr3 201990234 152 - 202621043 CAATTTGagtaagacacaatgaatttagacttcatgtattctcattttgaaataatttgcaaaagtgttaggc-----taaggatttacattttcattacctatgaggaaaTAAAG-CAAGCAAATTTGGACCAAAACT----------ACAAAAACTAAAGAATTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758254 152 - 205426864 CAATTTGagtaagacacaatgaatttaaacttcatttattctcattttgaaataatttgcaaaagtgttaggc-----taaggatttatattttcattacctatgaggaaaTAAAG-CAAGCAAATTTGGACCAAAACT----------ACAAAAACTAAAGAATTCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575067 150 + 86207423 CAATTTGGGTAAG--ACAatgaatttagacttcatttattctcattttgaaataatttgcaaaagtgttaggc-----taaggatttatattttcattacctatgaggaaaTAAAG-CAAGCAAATTCGGACCAAAACT----------ACAAAAACCAAAGAATTCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058097 152 + 204787373 CAATTTGagtaaaacacaatgaatttagacttcatttattctcattttgaaataatttgcaaaagtgttagac-----tagggatttatattttcactacctatgaggaaaTAAAG-CAAGCAAATTTGGACCGAAACT----------ACAAAAACCAAAGGATTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60989942 152 - 192460366 CAATTTGagtaaaacacaatgaatttagacttcatttattctcattttgaaataatttgcaaaagtgttagac-----tagggatttatattttcactacctatgaggaaaTAAAG-CAAGCAAATTTGGACCGAAACT----------ACAAAAACCAAAGGATTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11101908 152 - 17224310 CAATTTGagtaaaacacaatgaatttagacttcatttattctcattttgaaataatttgcaaaagtgttagac-----tagggatttatattttcactacctatgaggaaaTAAAG-CAAGCAAATTTGGACCGAAACT----------ACAAAAACCAAAGGATTCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414074 149 - 41321030 CAATTTGagtaaaacacaatgaatttagacttcatttattctcattttgaaataatttgcaaaagtgttagac-----taaggatttata---tcactacctatgaggaaaTAAAG-CAAGCAAATTTCAACCGAAACT----------ACAAAAACCAAAGGATTCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485536 152 - 101219884 CAATTGGagtaaaacacaatgaatttagacttcatttattctcattctgaaataatttgcaaaagtgttagac-----taaggatttatattttcactacctatgaggaaaTAAAG-CAAGCAAATTTGGACCGAAACT----------ACAAAAACCAAAGGATTCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871524 147 - 924385 CAATTTGAGTAAAACACAATGAATTTAGACTTCATTTATTCTCATTTTGAAATAATTTGCAAAAGTGTAAGAC-----TAAGGATTTATA---TCACTACCTATGAGGAAATAAAG-CAAGCAAATTTGGACCG--ACT----------ACAAAAACCAAAGGATTCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6713900 152 - 10587913 CAATTTcagtaaaacacaatgaatttagacttcatttattctcagtttgaaataatttgcaaaagtgttagac-----taaggatttatattttcattacctatgaggaaaTAAAG-CAAGCAAATTTGGACCAAAACT----------ACAAAAACTAAAGGATTCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047771 145 - 98464013 CAATT-GATTAACACACAATGAAATTAGATTTCACTCATTATAATTTTGAAATAATTTGCAAAAGTGCTAGGC-----TAAGGATTTATATTTTTATTACCTATGAGAAAATAAAG-TAAGCAAATTTGGACCAAAACT----------ACAAAAACTAAAG------ i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719414 139 + 27742158 CA-----ATTAAGACACAATGAAATTTGATTTTACTTATTTTAATTTTGAAATAATTTGCCAAAGAGCTAGGC-----TAGGGATT--TTTTTTTATTACCTATGAGAAAATAAAG-CAAGCAAATTTGGACCAAAACT----------ACAAAAACTAAAG------ i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256809 145 - 4835464 CAATT-GATTAAGACACAATGAAATTAGATTTAACTTATTTTAATTTTGAAATAATTTGTAAAAGTGCTAGGC-----CAGGGGTTTATATTTTTATTACCTATGAGAAAATAAAG-CAAGCAAATTTGGACCAAAACT----------ACAAAAACTAAAG------ i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715697 145 + 4093027 CAATT-GATTAAGACAAAATGAAATTAGATTTCACTTATTTTAATTTTGAAATAATTTGCAAAAGTGCTAGGC-----TAAGGATTTATATTTTTATTACCTATGAGAAAATAAAG-CAAGCAAATTTGGACCAAAACT----------ACAAAAACTAAAG------ i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1608328 154 - 9149476 CAATTTGAATAAGACAcattgatttcagactccattcatcctaattttgaaataattcctgaaagtgctaggc---acttcagatttatatttgtattacctatgagaaaaTAACT-CAAGCAAAGTTGAACCAAAACT----------ACAAAAATTAAAGGATTCA i micMur3.chr32 I 171 I 447 s otoGar3.GL873534 11055316 157 + 30473821 CCATTTGAATAAGATGCATTGATTTCCGACTCCATTCAACCTTATTTTGAAATAATTCCCTAAAGTGCTAGGCTAGGCTAAAGATTCATATGGGTATTACTGATGAGAAAAGAAAG-CAAGCAAAGTTCAACAAAAATG----------GCAATTATTAAAGTATTCA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45761727 145 - 149736546 CATAAGGAGTAGGACATATC---CTTAGGCTC----TATTCCAGTTCAGAAATAAGTTTTCAAAGATGTAGGT-----TAGCAATTAAGATTTCCATCAGTGATGAAAAAATAAAT-CAAGTGAGTTTGAACTGAAAAC----------ATGAAAACTAAAAGGTTAA i mm10.chr6 I 3 C 0 s canFam3.chr20 16594045 149 + 58134056 CAACGTAAGAAAGACAAACTGAACCCAGATAT--TTTATTCCACCTTTGAAATAATTTCCCAAAGTGCTAGGCTAAA-TAAAGATTTATATTTGTATTATCTATAAGAAAGTAAAGAAAAGCAAATTTGAAGTGAAATT----------TCA------AAACGTTTCA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1791393 157 - 2187301 CAATGCAAGTAATACACAATGAATTGAGACTCCTTTGATACTAATTCTGAAATAATGTTTACAAATGCTATTT-----TGAGAATTTATATTTGTATTACCTAC-----AATAAAG-GAAGCAAATTTTAAGTGAAATTTCTTGTTCACATAAAACTTAAGGGATTCA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=544295.000000 s hg38.chrUn_KI270749v1 103166 55 + 158759 AAGTATCATCAAGTGCTTTAAAAGTCACATTTTCAGTATTCTCATCATCACACAA s panTro5.chr3 201990386 55 - 202621043 AAGTATCATCAAGTGCTTTAAAAGTCACATTTTCAGTATTCTCATCATCACACAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758406 55 - 205426864 AAGTATCATCAAGTGCTTTAAAAGTCACATTTTCAGTATTCTCATCATCACACAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575217 55 + 86207423 AAGTATCATCAAGTGCTTTAAAAGTCACATTTTCAGTATTCTCATCATCACACAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058249 55 + 204787373 AATTATCATCAAGTGCTTTAAAAGTCACATTTTCAGTATCCTCATCATCCAACAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990094 55 - 192460366 AATTATCATCAAGTGCTTTAAAAGTCACATTTTCAGTATCCTCATCATCCAACAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102060 55 - 17224310 AATTATCATCAAGTGCTTTAAAAGTCACATTTTCAGTATCCTCATCATCCAACAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414223 55 - 41321030 AATTATCATCAAGTGCTTTAAAAGTCACATTTTCAGTATCCTCATCATCCAACAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485688 55 - 101219884 AATTATCATCGAGTGCTTTAAAAGTCACATTTTCAGTATCCTCATCATCCAACAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871671 55 - 924385 AATTATCATCAAGTGCTTTAAAAGTCACATTTTCAGTATCCTCATCATCCAACAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714052 55 - 10587913 AATTATCATCAAGTGCTTTAAAAGTCACATTTTCAGTATCCTCATCATCAAACAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047916 42 - 98464013 ------------GTTCTTT-AAAGTCACATTTTTAATATTGTCATCATCACACAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719553 43 + 27742158 ------------CTTCTTTAAAAGTCACATTTCCAATATTCTCATCATCCCACAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256954 43 - 4835464 ------------GTTCTTTAAAAGTCACATTTTCAATATTCTCATCATCACACAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715842 43 + 4093027 ------------GTTCTTTAAAAGTCACATTTTCAATATTCTCATCATCACACAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11055473 55 + 30473821 AATTACTTTCAAGTGCCTTAAAAGTTACATTAATAGTAATCTCAATTTCACACAC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45761872 54 - 149736546 AGTTATTTTCAAGTATTTTAAAAGTCCCATTCCCAACACTCTCATCTTCCTAAC- i mm10.chr6 C 0 C 0 s canFam3.chr20 16594194 55 + 58134056 AATTATTTTCAAGTATTTTAAACATTATATTTCCAGTACTCTCATCTTCATACAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1791550 54 - 2187301 AATTATT-CCAAGTGCTTTGCAAGTCACATCTCCATTACTCTCATCTGCACACAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 588228 1453 + 2414909 I e micMur3.chr32 1608482 447 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=986341.000000 s hg38.chrUn_KI270749v1 103221 79 + 158759 ACACTTAAATTGAAATGACAAATT-----ATTCAGTATGGCTGGTCAGAAGAGAGATTTGACTCAGAGAC-ATTTGTTACTAGTT s panTro5.chr3 201990441 79 - 202621043 ACACTTAAATTGAAATGACAGATT-----ATTCAGTATGGCTGGTCAGAAGAGAGATTTGACTCAGAGAC-ATTTGTTACTAGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758461 84 - 205426864 ACACTTAAATTGAAATGACAAATTATCTCATTCAGTATGGCTGGTCAGAAGAGAGATTTGACTCAGAGAC-ATTTGTTACTAGTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575272 84 + 86207423 ACACTTAAATTGAAATGACAAATTATCTCATTCAGTATGGCTGGTCAGAAGAGAGATTTGACTCCGAGAC-ATTTGTTACTAGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058304 84 + 204787373 ACACTTAAATTGAAATGACAAATGATCTCATTCAGTATGGCTCATCAGAAGAGAGGTTTGACTCAGAGAC-ATTTGTTACTAGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990149 84 - 192460366 ACACTTAAATTGAAATGACAAATGATCTCATTCAGTATGGCTCATCAGAAGAGAGGTTTGACTCAGAGAC-ATTTGTTACTAGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102115 84 - 17224310 ACACTTAAATTGAAATGACAAATGATCTCATTCAGTATGGCTCATCAGAAGAGAGGTTTGACTCAGAGAC-ATTTGTTACTAGTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414278 84 - 41321030 ACACTTAAATTGAAATGACAAATGATCTCATTCAGTATGGCTCATCAGAAGAGAGGTTTGACTCAGAGAC-ATTTGTTACTAGTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485743 84 - 101219884 ACACTTAAATAGAAATGACGAATGATCTCATTCAGTATGGCTCGTCAGAAGAGAGGTTGGACTCAGAGAC-ATTTGTTACTAGTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871726 84 - 924385 ACACTTAAATTGAAATGACAAATGATCTCATTCAGTATGGCTCATCAGAAGAGAGGTTTGACTCAGAGAC-ATTTGTTACTAGTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714107 84 - 10587913 ACACTTAAATTGAAATGACAAATGACCTCATTCAGTATGGCTCATCAGAAGAGAGGTTTGACTCAGAGAC-ATTTGTTACTAGTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46047958 84 - 98464013 ACACTTAAATTGAAATTACAAATTTTCTCATTCAGCATGGCTGGTCAGAAGAGAGATTTGACTAAGAGGC-ATTTGTTAGTTGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719596 84 + 27742158 ACACTTAAATTGAAATGACAAATTATCTCATTCAGTATGGCTGGTCAGAAGAGAGATTTGACTAAGAGAC-ATTTGTTAGTAGTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 256997 69 - 4835464 ACACTTAAATTGAAATTACAAATTATCTCATTCAGTATGGCTCATCAGAAGAGAG----------------ATTTGTTAGTAGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715885 84 + 4093027 ACACTTAAATAGAAATTACAAATTATCTCATTCAGTATGTCTGGTCAGAAGAGAGATTTTACTAAGAGAC-ATTTGTTAGTAGTT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 589681 82 + 2414909 ACACTTAAATTAAAATTACAAATTATCTCATTCAGTAAGGCTAGTCAGAAGAGCAACT--ACTCAGAGAC-ATTTGTTAGCAGTT i proCoq1.NW_012148064v1 I 1453 C 0 s otoGar3.GL873534 11055528 83 + 30473821 ACCCTTAAATTGAAATTACAAATCATCTCATTCAGTACGGCTAGTCAGAAGAGCAAGT--ACTCAGAGACTGTTTGTTAGCAATT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45761926 79 - 149736546 ACAATTAAGTAGAAATTACAAAGTATCTAGTTCAGAAAGGGTTGTTGAGACAAACAACTGA-----AGAC-ATTCTCTAGTAGCT i mm10.chr6 C 0 C 0 s canFam3.chr20 16594249 84 + 58134056 ACAATTAAACTGATTTTACAAATTATCCCCTTCAGTAAGGCTATTCAGAAAAGATAACCTATTCAGAAAC-ATTTGTTAGCATGT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1791604 83 - 2187301 ATGATTCAATTGAAAGTATAAATCATCCCATTCAGAAAGGCTGGTCAGAAGAGA-ATTCTACACAGAGAC-ATTCATAAGCAGGT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e micMur3.chr32 1608482 447 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=4063298.000000 s hg38.chrUn_KI270749v1 103300 322 + 158759 GTTATCTGTTATTATAGGAATTGCCATAATGAGACAAGCTCACTCATCATGGATTTCTATTGGTAAGAAGAAAAA-TAA---GGGATTTTTGTGAGAAGACAATGCTG--TCCTTT---TAAT----GTTAGCATCAAAAGGTCCAGGATGAAACTTAATTATTTTTATCTTTTCATACA-ACCATTTAGAGAGTTATCATGAATGAG-CTGCC---TTTTGAGGAGGGATCCCATTTTATAATCTAGTTAGCTTCTTTTCCCAAGAAATT-----GATTGACCTAAGTGCCATACTATTTTGAGATGATCAATTTGGATTGGAAATTTTTA-GAAACATGTTATT s panTro5.chr3 201990520 321 - 202621043 GTTATCTGTTATT-TAGGAATTGCCATAATGAGACAAGCTCACTCATCATGGATTTCTACTGGTAAGAAGAAAAA-TAA---GGGATTTTTGTGAGAAGACAATGCTG--TCCTTT---TAAT----GTTAGCATCAAAAGGTCCAGGATGAAACTTAATTATTTTTATCTTTTCATACA-ACCATTTAGAGAGTTATCATGAATGAG-CTGCC---TTTTGAGGAGGGATCCCATTTTATAATCTAGTTAGCTTCTTTTCCCAAGAAATT-----GATCGACCTAAGTGCCATACTATTTTGAGATGATCAATTTGGATTGGAAATTTTTA-GAAACATGTTATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758545 322 - 205426864 GTTATCTGTAATTATAGGAATTGCCACAATGAGACAAGCTCACTCATCATGGATTTCTATTGGTAAGAAGAAAAA-TAA---GGGATTTTTGTGAGAAGACAATGCTG--TCCTTT---TAAT----GTTAGCATCAAAAGGTCCAGGAAGAAACTTAATTATTTTTATCTTTTCATACA-ACCATTTAGAGAGTTATCATGAATGAG-TTGCC---TTTTGAGGAGGGATCCTATTTTATAATCTAGTTAGCTTCTTTTCCCAAGAAATT-----GATTGACCTAAGTGCCATACTATTTTGAGATGATCAATTTGGATTGGAAATTTTTA-GAAACATGTTATT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575356 322 + 86207423 GTTATCTATTATTATAGGAATTGCCATAATGAGACAAGCTCACTCATCATGGATTTCTATTGGTAAGAAGAAAAA-TAA---GGGATTTTTGTGAGAAGACAATGCTG--TCCTTT---TAAT----GTTAGCATCAAAAGGTCCAGGATGAAACTTAATTATTTTTATCTTTTCATACA-ATCATTTAGAGAGTTATCACGAATGAG-CTGCC---TTTTGAGGAGGGATCCCATTTTATAATCTAGTTAGCTTCTTTCCCCAAGAAATT-----GATTGACCTAAGTGCCATACTATTTTGAGATGATCAATTTGGTTTGGAAATTTTTA-GAAACATGTTATT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058388 321 + 204787373 GTTATCTCTTATTATAGGAATTGCCATAATGAGACAAGCTCACACATCGTGGATTTCTATCAGTAAGAAGAAAAA-TA----GGGATTTTTGTGAGAAGACAATGCCG--TCCTTT---TAAT----GTTAGCATCAAAAGGTCCAGGATAAAACTTAATTATTTTTATCTTTGCATACA-ACCAGTTAGCGAGTTGTCATGAACGAG-CTGCC---TTTTGAGGAGGGATCCCACTTTATAATCTAGTTAGCTTTTTTACCCAAGAAATT-----GATTGACCTAAGTGCCATACTATTTTGAGATGATCAATTTGGATTGGAAATTTTTA-GAAACATGTTATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990233 321 - 192460366 GTTATCTCTTATTATAGGAATTGCCATAATGAGACAAGCTCACACATCGTGGATTTCTATCAGTAAGAAGAAAAA-TA----GGGATTTTTGTGAGAAGACAATGCCG--TCCTTT---TAAT----GTTAGCATCAAAAGGTCCAGGATAAAACTTAATTATTTTTATCTTTGCATACA-ACCAGTTAGCGAGTTGTCATGAACGAG-CTGCC---TTTTGAGGAGGGATCCCACTTTATAATCTAGTTAGCTTTTTTACCCAAGAAATT-----GATTGACCTAAGTGCCATACTATTTTGAGATGATCAATTTGGATTGGAAATTTTTA-GAAACATGTTATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102199 321 - 17224310 GTTATCTCTTATTATAGGAATTGCCATAATGAGACAAGCTCACACATCATGGATTTCTATCAGTAAAAAGAAAAA-TA----GGGATTTTTGTGAGAAGACAATGCCG--TCCTTT---TAAT----GTTAGCATCAAAAGGTCCAGGATAAAACTTAATTATTTTTATCTTTGCATACA-ACCAGTTAGCGAGTTGTCATGAACGAG-CTGCC---TTTTGAGGAGGGATCCCACTTTATAATCTAGTTAGCTTTTTTACCCAAGAAATT-----GATTGACCTAAGTGCCATACTATTTTGAGATGATCAATTTGGATTGGAAATTTTTA-GAAACATGTTATT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414362 319 - 41321030 GTTATCTCTTATTATAGGAATTGCCATAATGAGACAAGCTCACACATCGTGGATTTCTATCAGTAAGAAGAAAAA-TA----GGGATTTTTGTGAGAAGACAATGCCG--TCCTTT---TAAT----GTTAGCATCAAAAGGTCCAGGATAAAACTTAATTATTTTTATCTTTGCATACA-ACCAGTTAGCGAGTTGTCATGAACGAG-CTGCC---TTTTGAGGAGGGATCCCACTTTATAATCTAGTTAGCTTTTTTCCCCAAGAAATT-----GATTGACCTAAGTGCCATACTATTTTGAGATGATCAATTTGGATTGGAAATTTTTA-GAAAC--GTTATT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64485827 323 - 101219884 GTTATCTCTTATTATAGGAATTGCCATAATGAGACAAGCTCACACATCATGGATTTCTATCAGTAAGAAGAAAAA-TAA--GGGATTTTTTGTGAGAAGACAATGCCG--TCCTTT---TAAT----GTTAGCATCAAAAGGTCCAGGATGAAACTTAATTATTTTTATCTTTGCGTACA-ACCAGTTAGCGAGTTATCATGAACGAG-CTGCC---TTTTGAGGAGGGATCCCACTTTATAATCTAGTTAGCTTTTTTCCCCAAGAAATT-----GATTGACCTAAGTGCCATACTATTTTGAGATGATCAATTTGGATTGGAAATTTTTA-GAAACATGTTATT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 871810 317 - 924385 GTTATCTCTTATTATAGGAATTGCCATAATGAGACAAGCTCACACATCGTGGATTTCTATCAGTAAGAAGAAAAA-------GGGATTTTTGTGAGAAGACAATGCCG--TCCTTT---TAAT----GTTAGCATCAAAAGGTCCAGGATAAAACTTAATTATTTTTATCTTTGCATACA-ACCAGTTAGCGAGTTGTCATGAACGAG-CTGCC---TTTTGAGGAGGGATCCCACTTTATAATCTAGTTAGCTTTTTTCCCCAAGAAATT-----GATTGACCTAAGTGCCATACTATTTTGAGATGATCAATTTGGATTGGAAATTTTTA-GAAAC--GTTATT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714191 322 - 10587913 ATTATCTGTTATTATAGGAATTGCCATAATGAGACAAGCTCACACATCATGGATTTCTATCAGTAAGAAAAAAAA-TAA---GGGATTTTTGTGAGAAGATAATGCTG--TCCTTT---TAAT----ATTAGCATCAAAAGGTCCAGTATGAAACTTAATTATTTTTATCTTTTCATACA-ACCAGTTAGCGAGTTATCATGAACGAG-CTGCC---TTTTGAGGAGGAATCCCACTTTATAATCTAGTTAGCTTTTTTTCCCAAGAAATT-----GATTGACCTAAGTGCCAAACTATTTTGAGATGATCAATTTGGATTGGAAATTTTTA-GAAACATGTTATT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46048042 325 - 98464013 GCTATCTGCTATTACAGTAATTGCCGTAATGAGAAAAGCTCACTCATCTTGGATTTCTATCAGAAAGAAGAAAAA-TAAAAAAAAATTTGTGTAAAAAGACAATACTG--TCCTTT---TAAT----GTTAGCATCAGAAGGTTCAGGGTGAAACCTAATTATTTTTATCTTTTCATACA-ACCATTTAGAGAGTTAACATCAATGAG-CTGCC---TTTTGATGAGCTATCCTATTTTATAATCTTTTTAGCTTCTTTTCCCAAGAAATT-----TATTGACCTAAGTGCTGTACTATTTTGAGATAATCAATTTGGAATGAAAATTTTTA-TAAACATGTTATT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719680 319 + 27742158 GCTATCTGCTATTACAGTAATTACCATAATAAGACAAGCTCACTCATCATGGATTTCTATTAGAAAGAAG-------AAAAAAAAAATTGTGTGAAAAGACAATACTG--TCCTTC---TAAT----GTTAGCATCAGAAGGTACAGGGTGAAACCTAATTATTTTTATCTTTTCATACA-ACCATTTAGAGAGTTAACCTCAATGAG-CTGCC---TTTTGATAAGCTATCCTATTTTATAATCTTGTTAGCTTCTTTTCCCAAGAAATT-----TATTGACCTAAGTGCCATACTATTTTGAGATAATCAATTTGGAATGAAAATTTTTA-TAGACATGTTATT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257066 324 - 4835464 GCTATCTGCTATTACAGTAATTGCCATAATGAGACAAGCTCACTTATTGTGGATTTCTATCAGAAAGAAGAAAAA-TAAAAAAAATTTTGTGTGAAAAGACAATACTG--TCCTTT---TAAT----GTTAGCATCAGAAGGTCCA-GGTGAAACCTAATTATTTTTATCTTTTCATACA-ACCTTTTAGAGAGTTAACATCAATGAG-CTGCC---TTTTGATGAGCTATCCTATTTTACAATCTTGTTAGCTTCTTTTCCCAAGAAATT-----TATTGACCTAAGTGCCATACTATTTTGAGATAATCAATTTGGAATGAAAATTTTTA-TAAACATGTTATT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3715969 326 + 4093027 GCTATCTGCTATTACAGTAATTGCCATAATGAGACAAGCTCACTTATCATGGATTTCTATCAGAAAGAAGAAAAATTAAAAAAAATTTTGTGTGAAAAGACAATACTG--TCCTTT---TAAT----GTTAGCATCAGAAGGTCCAGGGTGAAACCTAATTATTTTTATGTTTCCATACA-ACCATTTAGAGAGTTAACATCAATGAG-CTGCC---TTTTGATGAGCTATCCTATTTTATAATCTTGTTAGCTTCTTTTCCCAAGAAATT-----TATTGACCTAAGTGCCGTACTATTTTGAGATAATCAATTTGGAATGAAAATTTTTA-TAAACAAGTTATT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1608929 321 - 9149476 GTTATATGTTATTACAAGAATTGCTTTAATGAGAAAAGTTAATTTATCATGGATTTCTACCAGTAAGAAGAATAA-TAA---GGGAATTTTATTAGATGACAATGTTG--CTCTTT---AGAT----GTTAGCATCAAAAAGTCAAGGATGAGCCTAAATTATTTCTATCTTTTCAAAAA-ACCAGTTAGACAACTGCCATCAATGGG-TTGGC---TTTTAATAAAGTATTCCATTCTACAATCTAGTTATCTTCTTTTCCTGAGAGATT-----GACTGGCTGAAGTGTCATACTACTTAGAGATGATCAA-TTGAAATGGAAATTTTTA-GAAACATATTATT i micMur3.chr32 I 447 I 443 s proCoq1.NW_012148064v1 589763 310 + 2414909 -----CTGTTATTCTAAGAATTGCTTTAATGAGAAAAGTTAATTTATCATGGATTTCTACCAGTAAGAATAATAA-TAA---GGAATTTTTATTAGAAGACAATGTTG--TCCTTT---TGAT----GTTAGCATTGAAAAGTCAAGGATGAACCTTAATTATTTCTATCTTTTCATACA-ACCATTTAGGCA------ATCAATAGG-TTGGC---TTTTGATAAGATATTCCATTCTATAATCTAGTTATCTTCTTTTCCTGAGAAATT-----GACTGGCTGAAGTGCCATACTACTTTGAGATGATCAA-TTGAAATGGAAATTTTTA-GAAACATATTATT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11055611 316 + 30473821 GTTACATGTCATTG-AAGATTTGCCTTCATGAGAAAAGCTAATTTATGATGGACTTCTACCAGTAAGAATAATAA-TGA---GGGATTTTTGTTAAAAGACAATGGGG--TTCCTT---TGAT----GTTAGCATCAGAAAGTCAAAGATGAACCTTAATTCTTTCTATCTTTTCATACA----ATTTAGGCAACTC--ATCCATGGG-TTGGC---TTTTGATGAAGTATTACATTTTACAATCTAGTTATCTTCTTTTCCTGAGAAATT-----GACTGGCCTAAGTGCCATGCTACTCTGAGATGGTCAATTTGAAATGGAAATTTTTA-GAAATGTATTATT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45762005 328 - 149736546 TTTATATATTATTA-GAGAGTTGTCTTAATGAGACCAGATCCTTCAGCATAGATTGCCATAAACGCGAAGAATAA-TAC-----AGTTTTTTTCAGAGAACAATGTTAATGCATTT---GAAT----GTTTCTAGCACAATGTCAGTGATGAATCTTAAATATTTGTACCTTCCCATGTG--CTATATAGAGAACTACTGTCAAAGAG-ATAATAAGACTTGATGAAGAATCCTCTTTTATAATCTACCTCTCCCCTTTCCTCTAAAAGCTTGACAGACTAATCTATGTACCATATGACCTT-ACAAGATCAATTTGAAAGGAAAACATTTGTTAGAATTGTTATT i mm10.chr6 C 0 C 0 s canFam3.chr20 16594333 321 + 58134056 GTTGTATGTTATTATAACAACTGCCTTAATGAGACAGGTTCATTCAATACACATTTCTATCAGTAAGAAGAATAA-TA----GGGTTTTCTGTTGGAAGACAATGTTG--TCCTTT--CTGAT----ATTATCATCCAGAGGTCAAGGATGAAAC--AAATATTTCTGTCTTCCTATATA-ACACTCTAGGAAGCTATCATCAATCAGTTTGCT---TTTTGAAGAGATATCCCATTTTATAACCTAGTCATTTCCTTTCCCTGAGAAATT-----GAACTATTTAAGCGTCATACCACTTTGAGATAATTAGTTTGTGATGAAAATTTTTA-GAAGTATATTGTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1791687 313 - 2187301 GTTATATGCTATTATTAGAAATGCCTTAATGAGGCAAGCTCATTCAATATGAATTCCCATCAGTAAGGAGAATAA-------AGG----------GAAAACAATATCA--TCTCTTCTCTGATGTTAGTTAGCATTGGGAGGTCAAGGACTAACATTAGATATTTCT--CTTTCCATAAAAACCCTTTGGGAAGCTATCTTTCATCAGTTTGCT---ATCTGAGTAGGTA-CCCATTTTGTAATCTAGTTATCTTTTCT--CTGAGAAATT-----GAATTATTCAAATGCATTACTCCTTTAAGATAATCATTTGGGGGTAGAAATTTTCA-GTATTATAGAATT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=121640.000000 s hg38.chrUn_KI270749v1 103622 11 + 158759 TCTAATTTCTT s panTro5.chr3 201990841 11 - 202621043 TCTAATTTCTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758867 11 - 205426864 TCTAATTTCTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575678 11 + 86207423 TCTAATTTCTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058709 11 + 204787373 TCCAATTTCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990554 11 - 192460366 TCCAATTTCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102520 11 - 17224310 TCCAATTTCTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414681 11 - 41321030 TCCAATTTCTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486150 11 - 101219884 TCCAATTTCTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872127 11 - 924385 TCCAATTTCTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714513 11 - 10587913 TCTAATTTCTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46048367 11 - 98464013 TTTAATTTCCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27719999 11 + 27742158 TCTACTTTCCT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257390 11 - 4835464 TCTAATTTCCT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716295 11 + 4093027 TCTAATTTCCT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 590073 11 + 2414909 CATAATTTCTT i proCoq1.NW_012148064v1 C 0 I 96 s otoGar3.GL873534 11055927 11 + 30473821 CGTAATTCTTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45762333 11 - 149736546 CATAAGTCCTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16594654 11 + 58134056 CATAGCTCATT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1792000 11 - 2187301 CATAATTCCTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e micMur3.chr32 1609250 443 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=751226.000000 s hg38.chrUn_KI270749v1 103633 79 + 158759 GCTCCTTTCTCAGGTAGAAGCAGAATAGTAGCTcacttgcataatgcttggcacatgatttgtgctcaata-atggAGAG s panTro5.chr3 201990852 79 - 202621043 GCTCCTTTCTCAGGTAGAAGCAGAATAGTAGCTcacttgcataatgcttggcacatgatttgtgctcaata-atggAGAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758878 79 - 205426864 GCTCCTTTCTCAGGTAGAAGCAGAATAGTAGCTcacttgcataatgcttggcacatgatttgtgctcaata-atggAGAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575689 79 + 86207423 GCTCCTTTCTCAGGTAGAAGCAGAATAGTGGATCACTTCCATAATGCTTGGCACATGATTTGTGCTCAATA-ATGGAGAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058720 79 + 204787373 GCTCCTTTCTCAGGTAGAAGCAGAATAGTAGATCCCTCGCATAATGTTTGGCACATAATTTGTGCTCAATT-ATGGAGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990565 79 - 192460366 GCTCCTTTCTCAGGTAGAAGCAGAATAGTAGATCCCTCGCATAATGTTTGGCACATAATTTGTGCTCAATT-ATGGAGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102531 79 - 17224310 GCTCCTTTCTCAGGTAGAAGCAGAATAGTAGATCCCTCGCATAATGTTTGGCACATAATTTGTGCTCAATT-ATGGAGAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414692 79 - 41321030 GCTCCTTTCTCAGGTAGAAGCAGAGCAGTAGATCACTCGCATAATGTTTGGCACATAATTTGTGCTCAATT-ATGGAGAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486161 79 - 101219884 GCTCCTTTCTCAGGTAGAAGCAGAATAGTAGATCCCTCGCATAATGTTTGGCACATAATTTGTGCTCAATT-ATGGAGAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872138 79 - 924385 GCTCCTTTCTCAGGTAGAAGCAGAGCAGTAGATCACTCGCATAATGTTTGGCACATAATTTGTGCTCAATT-ATGGAGAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714524 79 - 10587913 GCTCCTTCCTCAGGTAGAGGCAGAATAGTAGATCACTCGCATCATGTTTGGCACGTAATTTGTGCTCAATT-ATGGAGAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46048378 79 - 98464013 GCTCCTTTCTCAGATAGAAGCAGAATGGTAGATCACTTGCGTAATGCTTGGCACATGATCTGTACTCAATA-ATGGAGAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720010 79 + 27742158 GCTCCTTTCTCAGATAGAAGCAGAATAGTAGATCACTTGTATGATGCTTGGCACATGATCTGTGCTCAATA-ATGGAGAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257401 79 - 4835464 GCTCCCTTCTCAGATAAAAGCAGAATAgtagatcacttgtataatgcttggcacatgatctgtgctcaata-aTGGAGAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716306 79 + 4093027 GCTCCTTTCTTAGATAGAAGCAGAACAGTAGATCACTTGCATAATGCTTGGCACGTGATCTGTGCTCAATA-ATGGAGAG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11055938 57 + 30473821 ----------------------GAATAGTATGCCACTTTCAAAATGCCAGGCACATGGT-TATGCTTTTTATACAAAGGT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45762344 64 - 149736546 ----ATTCCTCA--CAGAAGCAACAAAGTATATCATTTACATAATTGTTGGTATGTAGT---------AGG-TTAGAGAG i mm10.chr6 C 0 I 43 s canFam3.chr20 16594665 76 + 58134056 GTTCCTTTCTCACATAGAAGCACTAGAGTATATCACTGACATA---TCTGGCATTGGAATTGTACTCGTTA-TATGGGAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1792011 49 - 2187301 GCTC----------TAGAGATATTGTAGTGGATCACTAAC---------------------GTGCTCAATAGATAGAGTG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 590084 96 + 2414909 I e micMur3.chr32 1609250 443 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=489550.000000 s hg38.chrUn_KI270749v1 103712 50 + 158759 TTGCCATTACCATTATTAATAAAAATGCATATAAAACATATAATAATATA s panTro5.chr3 201990931 50 - 202621043 TTGTCATTACCATTATTAATAAAAATGCATATAAAACATATAATAATATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204758957 50 - 205426864 TTGCCATTACCATTATTAATAAAAATGCATATAAAACATATAATAATATA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575768 50 + 86207423 TTGCCATTACTATTATTAATAAAAATGCATATAAAACACATAACAATATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058799 50 + 204787373 TTGTCATtactattattaataaaaatgcatataaaatatataataataTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990644 50 - 192460366 TTGTCATtactattattaataaaaatgcatataaaatatataataataTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102610 50 - 17224310 TTGTCATtactattattaataaaaatgcatataaaatatataataataTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414771 50 - 41321030 TTGTCATtactattattaataaaaatgcatataaaatatataataatata i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486240 50 - 101219884 TTGTCATTACTATTATTAATAAAAATGCATATAAAACATATAATAATATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872217 50 - 924385 TTGTCATtactattattaataaaaatgcatataaaatatataataataTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714603 50 - 10587913 TTGTCATTACTATTATTAATAAAAATGCATATAAAACATATAATAATATG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46048457 50 - 98464013 TTGCCATTAATATTATCAATAAAAGTACACATAAATCATATAATAATATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720089 50 + 27742158 TTGCCACtaatattattaataaaaatacatatgaatcatataataatata i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257480 50 - 4835464 TTGCCATTAATATTATTAATAAAAATACACATAAATCATGTAATAATATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716385 49 + 4093027 TTGCCATTAATTTTATTAATAAAAAAACACATAAATCA-ATAATAATATA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11055995 50 + 30473821 TTGCCATTATAGTTTTTAATAATAACACACAGAAAATATATAGTGACAAA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16594741 48 + 58134056 TTGGTTTTACTATtaataatacacataataataataataataataata-- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1792060 47 - 2187301 ---tttttaatattattaataatatggtatataatatatataGTAATCTa i dasNov3.JH563077 C 0 I 2785 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 590084 96 + 2414909 I e mm10.chr6 45762408 43 - 149736546 I e micMur3.chr32 1609250 443 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=35384.000000 s hg38.chrUn_KI270749v1 103762 5 + 158759 TTGTT s panTro5.chr3 201990981 5 - 202621043 TTGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759007 5 - 205426864 TTGTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575818 5 + 86207423 TTGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058849 5 + 204787373 TTGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990694 5 - 192460366 TTGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102660 5 - 17224310 TTGTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414821 5 - 41321030 ttgtt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486290 5 - 101219884 TTGTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872267 5 - 924385 TTGTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714653 5 - 10587913 CTGTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46048507 5 - 98464013 TTCTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720139 5 + 27742158 ttCTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257530 5 - 4835464 TTGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716434 5 + 4093027 TTGTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11056045 5 + 30473821 GAGTA i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 590084 96 + 2414909 I e mm10.chr6 45762408 43 - 149736546 I e micMur3.chr32 1609250 443 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I e canFam3.chr20 16594789 0 + 58134056 C e dasNov3.JH563077 1792107 2785 - 2187301 I a score=171081.000000 s hg38.chrUn_KI270749v1 103767 18 + 158759 ATTATACACAAAGAG-------CGT s panTro5.chr3 201990986 18 - 202621043 ATTATATACAAAGAG-------CAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759012 18 - 205426864 ATTATACACAAAGAG-------CAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575823 18 + 86207423 ATTATACACAAAGAG-------TAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058854 18 + 204787373 ATTATACACAAAGAG-------TAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990699 18 - 192460366 ATTATACACAAAGAG-------TAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102665 18 - 17224310 ATTATACACAAAGAG-------TAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414826 18 - 41321030 attatacataaagag-------tat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486295 18 - 101219884 ATTATACACAAAGAG-------TAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872272 18 - 924385 ATTATACACGAAGAG-------TAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714658 17 - 10587913 ATTATACA-AAAGAG-------TAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46048512 18 - 98464013 ATTACGCACAAAGAG-------TAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720144 18 + 27742158 ATTACGCACAAAGAG-------TAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257535 18 - 4835464 ATCATGCACAAACAA-------TAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716439 18 + 4093027 ATTACGCACAAAGAC-------TAT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 590180 18 + 2414909 attataTACAAAGAG-------CAT i proCoq1.NW_012148064v1 I 96 C 0 s otoGar3.GL873534 11056050 25 + 30473821 TATATATACAAAGAGTACCTATTAC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16594789 18 + 58134056 ataataTTCAAAGAG-------TAT i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45762408 43 - 149736546 I e micMur3.chr32 1609250 443 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I e dasNov3.JH563077 1792107 2785 - 2187301 I a score=667360.000000 s hg38.chrUn_KI270749v1 103785 55 + 158759 ACTAGATACCATGCCTCCGGATAGAAG-----TAGTATTTCTTTCTTAGCATCCAAACTT s panTro5.chr3 201991004 55 - 202621043 ACTAGATACCATGCCTCCGGATAGAAG-----TAGTATTTCTTTCTTAGCATCCAAACTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759030 55 - 205426864 ACTAGATACCATGCCTCCGGATAGAAG-----TAGCATTTCTTTCTTAGCATCCAAACTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575841 55 + 86207423 ACTAGATACCATGCCTCCGGATAGAAG-----TAGTATTTCTTTCTTAGCATCCAAACTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058872 55 + 204787373 ACTAGATACCATGCCTTCGGATAGAAG-----TAGTATTTCTTTCTTAGCATCCCAACTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990717 55 - 192460366 ACTAGATACCATGCCTTCGGATAGAAG-----TAGTATTTCTTTCTTAGCATCCCAACTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102683 55 - 17224310 ACTAGATACCATGCCTTCGGATAGAAG-----TAGTATTTCTTTCTTAGCATCCCAACTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414844 60 - 41321030 actagataCCATGCCTCCGGATAGAAGTAGTATAGTATTTCTTTCTTAGCATCCTAACTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486313 55 - 101219884 ACTAGATACCATGCCTCCGAATAGAAG-----TAGTATTTCTTTCTTAGCATCCCAACTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872290 55 - 924385 ACTAGATACCATGCCTCCGGATAGAAG-----TAGTATTTCTTTCTTAGCATCCCAACTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714675 55 - 10587913 ACTAGATACCATGCCTCCGGATAGAAG-----TAGTATTTCTTTCTTAGCATCCCAAATT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46048530 55 - 98464013 ACTAGATACCATGCCTCCAGATATAAG-----TAGTACTTCTTTTGTAGCATCTCAACTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720162 55 + 27742158 ACTAGATACCATGCCTCCAGATGTAAG-----TAGTACTTCTTTTGTAGCATCTCAACTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257553 55 - 4835464 ACTAGATACCATGCCTGCAGATATAAG-----TAGTACTTCTTTTGTAGCATCTCAACTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716457 55 + 4093027 ACTAGATACCATGCCTCCAGATATAAG-----TAGTACTTCTTTTGTAGCATCTCAACTT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 590198 55 + 2414909 ACTAGATACCATGCCTCCAAATAAAag-----aagccctcctttcttcaagttccaattt i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11056075 55 + 30473821 AATAGATACCATGCCTCTGGAATGAAG-----TAGCACTCCTTCCCTGGTGTCTCCATTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16594807 55 + 58134056 GCTAGATACCATGACTCTGGATAGAGT-----TAGTATTTctttcttagtgctccaactt i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1794892 55 - 2187301 ACTAGGAATCATGCCTCTGGATAGAAT-----TAGGAGTTCTTTCTTAGTGCCCCAAATT i dasNov3.JH563077 I 2785 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45762408 43 - 149736546 I e micMur3.chr32 1609250 443 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=1863898.000000 s hg38.chrUn_KI270749v1 103840 166 + 158759 GTACATTGTACCTTTTTTTGCCTTATTACCTATAATACTTTTTAAATTttgtgtgtttacttttctgtctc-acagaataccat------aagcattccttgtg-gataaaaatgttatcttttatctctgtatccttaactatattctacaaatgtttgctgtaagaattaaC s panTro5.chr3 201991059 166 - 202621043 GTACATTGTACCTTTTTCTGCCTTATTACCTATAATACTTTTTAAATTttgtgtgtttacttttctgtctc-acagaatacaat------aagcattccttgtg-aataaaaatgttatcttttatctctgtatccttaactatattctacaaatgtttgctgtaagaattaaC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759085 166 - 205426864 GTACATTGTACCTTTTTCTGCCTTATTACCTGTAATACTTTTTAAATGttgtgtgtttacttttctgtctc-acagaatacaat------aaacattccttgtg-gataaaaatgttatcttttatctctgtatccttaactatattctacaaatgtttgctgtaagaattaaC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67575896 166 + 86207423 GTACATTGTACCTTTTTCTGCCTTATTACCTATAATACTTTTTAAATGttgtgtgtttacttttctgtctc-acagaatacaat------aagcattccttgtg-gataaaaatgttatcttttatctctgtatccttaactatattctacaaatgtttgctgtaagaattaaC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66058927 166 + 204787373 GTACATTGTACCTTTTTGTGCCTTATTAcctataatactttttaaattttgtgtgtttacttttctgcctc-ccagaatacaat------aagcattccttgtg-ggtaaaaatactgtcttttatctctgtatccttaactataccctgcaaatgtttgcTGTaagaattaac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990772 166 - 192460366 GTACATTGTACCTTTTTGTGCCTTATTACCTATAATACTTTTTAAATTttgtgtgtttacttttctgcctc-ccagaatacaat------aagcattccttgtg-ggtaaaaatactgtcttttatctctgtatccttaactataccctgcaaatGTTTGCTGTaagaattaac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102738 166 - 17224310 GTACATTGTACCTTTTTGTGCCTTATTAcctataatactttttaaattttgtgtgtttacttttctgcttc-ccagaatacaat------aagcattccttgtg-ggtaaaaatactgtcttttatctctgtatccttaactataccctgcaaatgtttgcTGTaagaattaac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17414904 166 - 41321030 GTACATTGTACCTTTTTGTGCCTTATTAcctataatactttttaaattttgtgtgtttacttttctgcctc-ccagaatacaat------aagcattccttgtg-ggtaaaaatactgtcttttatctctgtatccttaacTATACCCTACAAATGTTTGCTGTAACaattaac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486368 164 - 101219884 GTACGTTGTACCTTTTTGTGCCTTATTACCTATAATACTTTTTAaa--ttgtgtgtttacttttctgtctc-ccagaatacaat------aagcattccttgtg-ggtaaaaatactgtcttttatctctgtatccttaacTATATCCTACAAATGTTTGTTGTaagaattaac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872345 166 - 924385 GTACATTGTACCTTTTTGTGCCTTATTAcctataatactttttaaattttgtgtgtttacttttctgcctc-ccagaatacaat------aaacatttcttgtg-ggtaaaaatactgtcttttatctctgtatccttaactataccctacaaatgtttgctgtaagaattaaC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714730 163 - 10587913 GTACATTGTACCTTTTTGTGCCTTATTAcctataatactttttaaattttgtgtgtttacttttctgtctc-ccag---acaat------aagcattccttgtg-ggtaaaaatactgtcttttatctctgtatccttaactatatcctacaaatgtttgctgtacgaattaaC i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46048585 166 - 98464013 GTACATTGTATCTTTTTCTGCCTTATTACCTGTAATATTTTTTAAATTAtgtgtgtttactttgctttctc-ctggaatacaat------aagcattcattgtg-ggtaaaaatgttatcttttatctctgtatccttaactatattctacaaatgtttgctgtaagaattaaC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720217 164 + 27742158 GTACATTGTATCTTTTTCTGCCTTATTACCTGTAATATTTTTTAaat--tttgtgtttacttttctatctc-ccggaatacaat------aagcattcattgtg-ggtaaaaatgttattttttatctctgtatccttaactatattctacaaatgtttgctgtaagaattaaC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257608 164 - 4835464 GTACATTGTATCTTTTTCTGCCTTATTACCTGTAATATTTTTAAaat--tttgtgtttacttttctatctc-ccagaatacaat------aagcattcattgtg-ggtaaaaatgtcatcttttatctctgtattcttaactatattctacaaatgtttgctgtaagaattaaC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716512 165 + 4093027 GTACACTGTATCTTTTTCTGCCTTATTACCTGTAATTTTTTTTAATTt-tgtgtgtttacttttctatctc-ctggaataaaat------aagcattcattgtg-ggtaaaaatgttatcttttgtctctgtgtccttaactatattctacaaatgtttgctgtaagaattaaC i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 590253 163 + 2414909 gtacactgtactttcttctgtctgattacctataatactttattacttttatttgttcacttctctgtgtc-ccag-atccaat--------gtgttccttgtg-agtaaaaatgctatcttttatctctatatccttagctacactcaataaatatttcctgtaaggattaat i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11056130 152 + 30473821 GTA-----------CTTCTGTTTCATTACCTGTAATACTTTATTATTTGTATTTGTTCACTTCTCTGACTC-CCAG-ATACAAT--------GTGTTCCTTGGG-AGTAAAAATGCCATTTGTGATCACTATATCCTTAGCTACATTCGATAAATATTTACTATAAGGATTAAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45762451 111 - 149736546 GTACATGATAGCTTTTTA---------------AAAACT----GAACATAGTGTCAGTTCCTCTATATTTTACTATAGTTCCAT------AGCAATGCCTAGTT---TAAAAA-----------------------------------GAGAAAAATAAACTTCAACCAGTAAT i mm10.chr6 I 43 C 0 s canFam3.chr20 16594862 170 + 58134056 acacagtatatatttttctgttatattacctacaatatcttattacttttgtgtgcttactt--ctgtctc-ccagattgtaatcataacagggatttcttcta-ggcagatatacaatctttgatctctgtgtccttaaacacactcgataaatgtttgctgtaaaaattaat i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1794947 167 - 2187301 GTACACTGTAAATTTTTCTGTCATATTCCCTGTAACACTTTCATTATTTTATGTATCCTTTTTTCTGACTT-CCTGATTACAAT------AAGGTTTTCTTGGGGGGCATAAACATTATTTGTTATCTCTATTTCTCTAACTGTACTCAATAAATGTTTATTATAAGAATTAGT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e micMur3.chr32 1609250 443 - 9149476 I e rhiRox1.KN296641v1 1370209 2302 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1224457 2302 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=12291.000000 s hg38.chrUn_KI270749v1 104006 1 + 158759 A s panTro5.chr3 201991225 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759251 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576062 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059093 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990938 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102904 1 - 17224310 a i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415070 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486532 1 - 101219884 a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872511 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714894 1 - 10587913 A i colAng1.NW_012114711v1 I 1 C 0 s rhiRox1.KN296641v1 1372511 1 - 1467263 A i rhiRox1.KN296641v1 I 2302 I 954 s rhiBie1.NW_016820128v1 1226759 1 - 2311269 A i rhiBie1.NW_016820128v1 I 2302 I 954 s calJac3.chr15 46048751 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720381 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257772 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716677 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 590416 1 + 2414909 G i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11056282 1 + 30473821 G i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45762562 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16595032 1 + 58134056 g i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795114 1 - 2187301 G i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e micMur3.chr32 1609250 443 - 9149476 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=130792.000000 s hg38.chrUn_KI270749v1 104007 13 + 158759 AAAACAAATAAAT s panTro5.chr3 201991226 13 - 202621043 AAAACAAATAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759252 13 - 205426864 AAAACAAATAAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576063 13 + 86207423 AAAATAAATAAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059094 13 + 204787373 aaaataaataaat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990939 13 - 192460366 aaaataaataaat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102905 13 - 17224310 aaaataaataaat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415071 13 - 41321030 aaaaaaaataaat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486533 13 - 101219884 aaaataaataaat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872512 13 - 924385 Aaaataaataaat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714895 13 - 10587913 AAAATAAATAAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46048752 13 - 98464013 AAAATAAATAAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720382 13 + 27742158 AAAATAAATAAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257773 13 - 4835464 AAAATAAATAAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716678 9 + 4093027 A----AAATAAAT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 590417 13 + 2414909 AAAATAAATGAAT i proCoq1.NW_012148064v1 C 0 I 220 s otoGar3.GL873534 11056283 9 + 30473821 AAAATAAAT---- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45762563 12 - 149736546 AAGAGAGAAGAG- i mm10.chr6 C 0 C 0 s canFam3.chr20 16595033 8 + 58134056 aaAAGAAA----- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795115 13 - 2187301 AAAAGAAATAAAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e micMur3.chr32 1609250 443 - 9149476 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=483041.000000 s hg38.chrUn_KI270749v1 104020 51 + 158759 AAATTGT-------TAAACTACATTTGT------TTTCTTT-AAACATAGCA-TCTGTGTGAAGAA s panTro5.chr3 201991239 48 - 202621043 AAATTGT-------TAAACTACAT---T------TTTTTTT-AAAGATAGCA-TCTGTGTGAAGAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759265 51 - 205426864 AAATTGT-------TAAACTACATTTGT------TTTTTTT-AAAGATAGCA-TCTGTGTGAAGAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576076 53 + 86207423 AAATTCT-------TAAACTACATTTGT----TATTTTTTT-AAAGACAGCA-TCTGTGTGAAGAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059107 53 + 204787373 aaatagt-------taaaCTACATTTGT----TACTTCTTT-AAAGAGAGCA-TCTGTGTGAAGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60990952 53 - 192460366 aaatagt-------taaaCTACATTTGT----TACTTCTTT-AAAGATAGCA-TCTGTGTGAAGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102918 53 - 17224310 aaatagt-------taaaCTACATTTGT----TACTTCTTT-AAAGATAGCA-TCTGTGTGAACAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415084 53 - 41321030 aaatagt-------taaaCTACATTTGT----TACTTCTTT-AAAGATAGCA-TCTGTGTGAAGAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486546 53 - 101219884 aaatTGT-------TAAACTACATTTGT----TACTTTTTT-AAAGATAGCA-TCTGTGTGAAGAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872525 53 - 924385 aaatagt-------taaaCTACATTTGT----TACTTCTTT-AAAGATAGCA-TCTGTGTGAAGAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6714908 53 - 10587913 AAATTGT-------TAAACTACATTTGT----TACTTTTTT-AAAGATAGCA-TCTGTGTGAAGAA i colAng1.NW_012114711v1 C 0 I 792 s calJac3.chr15 46048765 53 - 98464013 AAATTGT-------TAAACAACATTTGT----TATATTTTT-AAAGAAAGCA-TCTGTGTAAAGAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720395 53 + 27742158 AAATTGT-------TAAACAACATTTGT----TATTTTTTT-AAAGATAACA-TCTGTGTAAAGAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257786 52 - 4835464 AAATTGT-------TAAACAACATTTGT----TATTTTTTT-AAAGATAGCA-TC-GTGTAAAGAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716687 53 + 4093027 AAATTGT-------TAAACAACATTTGT----TATTTTTTT-AAAGATAGCA-TCTGTATAAAGAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11056292 53 + 30473821 GAATCAT-------TAAGCCACATTTGC----TGTTGTTTT-TAAGATAGCA-CCTGCATGAATAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45762575 65 - 149736546 AGATGGTCCTGCACTAAACATTAgcagtggcttgcctctgt-aaacttagcattctagaggaagag i mm10.chr6 C 0 C 0 s canFam3.chr20 16595041 42 + 58134056 ----TGT-------TA------ATTTGT----T-CTTTTTT-TAAGGTAGCA-TCTGAATGAATAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795128 54 - 2187301 TAATGCA-------TAGACTACATCTAT----TCTTTTTTTCTATGGTAGAC-TCAGAATTAAGAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 590430 220 + 2414909 I e micMur3.chr32 1609250 443 - 9149476 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=1458726.000000 s hg38.chrUn_KI270749v1 104071 189 + 158759 ACTACTGAATTCAATATGCATAGTGTTTAAATGATGTTGCAACATGGCCAGCTT-GG-AGTCCTCATagcgtgtcgagttctgaatattcacacatcttacagggcatctagtttt-ccccagagc------aagcactccaagcaataggaaatgggagcagac--tctgcttaaa-------atataaactttcagctgtcacca s panTro5.chr3 201991287 189 - 202621043 CCAACTGAATTCAATATGCATAGTGTTTAAATGATGTTGCAACATGGCCAGCTT-GG-AGTCCTCATagcgtgtcgagttccgaatattcacacatcttacagggcatctagtttt-ccccagagc------aagcactccaagcaataggaaatgggagcagac--tctgcttaaa-------atgtaaactttcagctgtcacca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759316 183 - 205426864 CCTACTGAATTCA------ATAGTGTTTAAATGATGTTGCAACATGGCCAGCTT-GG-AGTCCTCATagcgtgtggagttccgaatattcacacatcttacagggcatctagtttt-ccccagagc------aagcactccaagcaataggaaatgggagcagac--tctgcttaaa-------atgtaagctttcagctgtcacca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576129 189 + 86207423 CCTACTCAATTCAATATGCATAGTGTTTAAATGATGTTGCAACATGGCCAgctt-gg-agtcctcatagcgtgtcaagttctgaatattcacacatcttacagggcatctagtttt-ccccagagc------aagcattccaagcaataggaaatgggagcagac--tctgcttaaa-------atgtaaactttcagctgtcacca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059160 189 + 204787373 CCTACTCAATTCAATATGCATAGTGTTTAAATGATGTTGCAAcatgtccagctt-gg-agtccttataacgtgtcgacttccaaatattcacacatcttacagggcagctagtttg-ccccagagc------aagcatttcaagccataggaaatgggagcaggc--tattctaaaa-------atgtaaactttaagctggcacca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991005 189 - 192460366 CCTACTCAATTCAATATGCATAGTGTTTAAATGATGTTGCAAcatgtccagctt-gg-agtccttataacgtgtcgacttccaaatattcacacatcttacagggcagctagtttg-ccccagagc------aagcatttcaagccataggaaatgggagcaggc--tattctaaaa-------atgtaaactttaagctggcacca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11102971 189 - 17224310 CCTACTCAATTCAATATGCATAGTGTTTAAATGATGTTGCAAcatgtccagctt-gg-agtccttataacgtgtggacttccaaatattcacacatcttacagggcagctagtttg-ccccagagc------aagcatttcaagccacaggaaatgggagcaggc--tcttctaaaa-------atgtaaactttaagcaggcacca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415137 189 - 41321030 CCTACTCAATTCAATATGCCTAGTGTTTAAATGATGTTGCAAcatgtccagctt-gg-agtccttataacgtgtcgacttccaaatattcacacatcttacagggcagctagtttg-ccccagagc------aagcatttcaagacataggaaatgggagcaggc--tcttctaaaa-------atgtaaactttaagctggcacca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486599 189 - 101219884 CCTACTCAATTCAATATGCATAGTGTTTAAATGATGTTGCAACATGTCCAGCTT-GG-AGTCCTTATaacgtgtcgacttccgaatattcacacatcttacagggcagctagtatt-ccccagagc------aagcatttcaagcaataggaaatgggagcagac--tcttctaaaa-------atgtaaactttaagctggcacca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872578 189 - 924385 CCTACTCAATTCAATATGCATAGTGTTTAAATGATGTTGCAAcatgtccagctt-gg-agtccttataacgtgtcgacttccaaatattcacacatcttacagggcagctagtttt-ccccagagc------aagcatttcaagccataggaaatgggagcagac--tcttctaaaa-------atgtaaactttaagctggcacca i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46048818 189 - 98464013 CCTACTCAATTCAGAGTGCGTAGTGTTTAAATGATGTTGCAGAATGGCCAGCTT-GA-Agtctttgtagcctgccaacttcagaatattcgcccgtcttacatggctactggtttt-ccctagtgc------aagcattctgagcaataggaaatgggagcagac--tgttcttaaa-------atgtaaacgttcagctggcacta i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720448 188 + 27742158 CCTACTCAATTCAGAGTGCATAGTGTTTAAATGATGTTGCAACATGGCCAGCTT-GG-AGTCTtc-tagcatgccaacttcagaatattcgcacgtcttacatagctactggtttt-ccccagtgc------aagcattctgagcaataggaaatgggagcagac--tgttcttaaa-------atgtaaactttcagctggcactg i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 257838 190 - 4835464 CCTACCCAATTCAGAGTGCATAGTGTTTAAATGATGTTGCAACATGGCCAGCTT-GG-AGTCTTCATAGCATGCCAACTTCAGAATATTCGCATGTCTTACACGGCTACTGGTTTT-CCCCAGTGC------AAGCATTCTGAGCAATAGGAAATGGGAGCAGTC-TTGTTCTCAAA-------ATGTAAACTTTCAGCGGGCACTG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716740 189 + 4093027 CCTACTCAATTCAGAGTGCATAGTGTTTAAATGATGTTGCAGCATGGCCAGCTT-GG-Agtctttgtagcatgccaacttcagaatattcgcacgtcttacacggctactggtttt-ccccagtgc------aagcattctgagcaataggaaatgggagcagac--tgttcttaaa-------atgtaaactttcagctggcacta i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11056345 189 + 30473821 TTTACTCAATTCAAAATGCACAAGGATTACATGATGTAGGGAGGTGGCCAGTTT-GA-GAACCTCATGgcatgctgacttcagatca-----atgtctaacctggcggctgcttttaccccagagc------aagcgttccaaatagctggaaa-gggtgcag----tcctcttgaaccaacttgtctagactttcaagagggacag i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45762640 83 - 149736546 -----------------gcatggtactta--------------------------------------------------------------------------ggcagtcgagact-atccaaggctatgtaaggcactccgggc---------------cagcc--tgcattacag-------a-atgagctttgacct------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16595083 152 + 58134056 CCTACTCAATTTAAAATGCATAATGTTTAAGCACTATATAAAAACAGCtagatt-ggccttcctcatagcttggtgactttaaggtattt--acttctta------aattgaatca-ccttagagc------aagcattccaagcaag-------------------tcctttcaga-------a-------------ctggcacag i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795182 192 - 2187301 CCTACTCAATGCAAAATGCACAGTGTTTAACTGCTTTAAAAACCTAGCTAActtagg-cttcctcatagcatggtaaccttagagtattcacacttcttacatggcagcaggctta-ccccaaagt------agacattccaagcaagagaaaatggaagctgacagttctcttaaa-------atctagacatggaactagcacca i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 590430 220 + 2414909 I e micMur3.chr32 1609250 443 - 9149476 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I e colAng1.NW_012114711v1 6714961 792 - 10587913 I a score=26996.000000 s hg38.chrUn_KI270749v1 104260 2 + 158759 tg s panTro5.chr3 201991476 2 - 202621043 tg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759499 2 - 205426864 tg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576318 2 + 86207423 tg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059349 2 + 204787373 tg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991194 2 - 192460366 tg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103160 2 - 17224310 tg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415326 2 - 41321030 tg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486788 2 - 101219884 tg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872767 2 - 924385 tg i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46049007 2 - 98464013 tg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720636 2 + 27742158 tg i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258028 2 - 4835464 TG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3716929 2 + 4093027 tg i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 590650 2 + 2414909 tg i proCoq1.NW_012148064v1 I 220 C 0 s otoGar3.GL873534 11056534 2 + 30473821 tg i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16595235 2 + 58134056 tg i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795374 2 - 2187301 ta i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45762723 0 - 149736546 C e micMur3.chr32 1609250 443 - 9149476 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I e colAng1.NW_012114711v1 6714961 792 - 10587913 I a score=985382.000000 s hg38.chrUn_KI270749v1 104262 80 + 158759 tcatttctaccacattttactgatgaagcagtcacagagctaacccaggttcaaagagagaagcaataaaccccatcttt s panTro5.chr3 201991478 80 - 202621043 tcatttctaccacattttactgatgaagcagtcacagagctaacccaggttcaaagagagaagcaataaaccccatcttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759501 80 - 205426864 tcatttctaccacattttactgatgaagcagtcacagagctaacccaggttcaaagagagaagcaataaaccccatcttt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576320 80 + 86207423 tcatttctaccacattttactgatgaagcagtcacagagctaacccaggttcaaagagagaagcaataaaccccatcttt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059351 80 + 204787373 tcatttctaccacattttactggtgaagcagtcacagagctaacccaggtccaaagagagaagcaataaatcccatcttt i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60991196 80 - 192460366 tcatttctaccacattttactggtgaagcagtcacagagctaacccaggtccaaagagagaagcaataaatcccatcttt i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11103162 80 - 17224310 tcatttctaccacattttactggtgaagcagtcacagagctaacccaggttcaaagagagaagcaataaatcccatcttt i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17415328 80 - 41321030 tcatttctcccacattttactggtgaagcagtcacagagctaactcaggttcaaagagagaagcaataattcccatcttt i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64486790 80 - 101219884 tcatttctaccacattttactggtgaagcagtcacagagctaacccaggttcaaagagagaagcaataaatcccatcttt i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 872769 80 - 924385 tcatttctaccacattttactggtgaagcagtcacagagctaacccaggttcaaagacagaaacaataaattccatcttt i manLeu1.NW_012098965v1 C 0 I 1 s calJac3.chr15 46049009 80 - 98464013 tcatttgtaccacattttactggtgaagcagtcacaggactaacccaagttcaaagagagaagcaataaaccccatcttt i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27720638 80 + 27742158 tcatttctaccacattttaccggtgaagcagtcacaggacaaacccaagttcaaagacagaagcaataaactccatcttt i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 258030 80 - 4835464 TCATTTCTACCACATTTTACTGGTGAGACAGTTACAGGACTAACTCAAGTTCAAAGAGAGAAGCAATAAACCCCATCTTT i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3716931 80 + 4093027 tcatttctaccacattttactggtgaagcagtcacaggactaatccaagttcaaagagagaagcaataaaccccatcttt i aotNan1.NW_018502033v1 C 0 I 1 s micMur3.chr32 1609693 80 - 9149476 tcatttctaccacattttagtggataaggagtcacaggactagtccaggttcaaagagaaaagaaataaactccatcttt i micMur3.chr32 I 443 C 0 s proCoq1.NW_012148064v1 590652 80 + 2414909 tcatttctaccgcattttactggataagcagtcacaggactaacccaggttcaaagagagaagaaataaactccatcttt i proCoq1.NW_012148064v1 C 0 I 78 s otoGar3.GL873534 11056536 78 + 30473821 tcatttctaccacattttactggttaagaagacacaggattaatacaggttcagagacagaagaaataaactc--tcttt i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45762723 35 - 149736546 --------------------------cacaaaCCTATAACTAACT--------------AAATCAAGAAA-----TATTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16595237 80 + 58134056 tcacttctactatattatactggttacaaagccacaaggccaactcaaattcaagaagagaagaaataaagtacatcttt i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795376 78 - 2187301 tcaattctacctc-ctttattggctaagcagttacagggccagcccaagttcaaagacag-ggaaatgaactccactttt i dasNov3.JH563077 C 0 I 1 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I e colAng1.NW_012114711v1 6714961 792 - 10587913 I a score=13365.000000 s hg38.chrUn_KI270749v1 104342 1 + 158759 t s panTro5.chr3 201991558 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759581 1 - 205426864 t i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576400 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059432 1 + 204787373 t i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60991277 1 - 192460366 t i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11103243 1 - 17224310 t i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17415409 1 - 41321030 t i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64486871 1 - 101219884 t i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 872850 1 - 924385 t i manLeu1.NW_012098965v1 I 1 C 0 s calJac3.chr15 46049090 1 - 98464013 t i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27720719 1 + 27742158 t i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 258111 1 - 4835464 T i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3717012 1 + 4093027 t i aotNan1.NW_018502033v1 I 1 C 0 s micMur3.chr32 1609773 1 - 9149476 t i micMur3.chr32 C 0 I 77 s otoGar3.GL873534 11056615 1 + 30473821 t i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45762758 1 - 149736546 T i mm10.chr6 C 0 C 0 s canFam3.chr20 16595317 1 + 58134056 c i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795455 1 - 2187301 t i dasNov3.JH563077 I 1 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 590732 78 + 2414909 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I e colAng1.NW_012114711v1 6714961 792 - 10587913 I a score=17335.000000 s hg38.chrUn_KI270749v1 104343 2 + 158759 at s panTro5.chr3 201991559 2 - 202621043 at i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759582 2 - 205426864 at i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576401 2 + 86207423 at i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059433 2 + 204787373 at i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991278 2 - 192460366 at i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103244 2 - 17224310 at i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415410 2 - 41321030 at i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486872 2 - 101219884 at i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872851 2 - 924385 at i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46049091 2 - 98464013 at i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720720 2 + 27742158 at i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258112 2 - 4835464 AT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717013 2 + 4093027 at i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11056616 2 + 30473821 gc i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16595318 1 + 58134056 -c i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795456 2 - 2187301 at i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 590732 78 + 2414909 I e mm10.chr6 45762759 0 - 149736546 C e micMur3.chr32 1609774 77 - 9149476 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I e colAng1.NW_012114711v1 6714961 792 - 10587913 I a score=785442.000000 s hg38.chrUn_KI270749v1 104345 75 + 158759 gcagaaag--t-gagaaagacattgcagtcatcattaattacccacaGACCATTTAATCTATGTCCTCATTAATGACA s panTro5.chr3 201991561 75 - 202621043 gcagaaag--t-gagaaagacattgcagtcatcattaattacccacaGACCATTTAATCTATATCCTCATTAATGATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759584 75 - 205426864 gcagaaag--t-gagaaagacattgcagtcatcattaattacccacaGACCATTTAATCTATATCCTCATTAATGACA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576403 75 + 86207423 gcagaaag--t-gagaaagacattgcagtcgtcactaattacccacaGACCATTTAATCTATATCTTCATTAATGATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059435 71 + 204787373 gcaggaag--t-gagaaagacattgttgtcgtcattaattacccacaGAC----TAATCTGTATCCTCATTAATGACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991280 71 - 192460366 gcaggaag--t-gagaaagacatcgttgtcgtcattaattacccacaGAC----TAATCTGTATCCTCATTAATGACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103246 71 - 17224310 gcagaaag--t-gagaaagacatcgttgtcgtcattaattacccacaGAC----TAATCTGTATCCTCATTAATGACA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415412 75 - 41321030 gcagaaag--t-gagaaagacatcgctgtcgtcattaattacccacaGACCATTTAATCTGTATCCTCATTAATGACA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486874 75 - 101219884 gcaaaaag--t-gagaaagacatcgctgtcgtcattaattacccacaGACCATTTAATCTGTATCCTCATTAATGACA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872853 75 - 924385 gcagaaag--t-gagaaaggcatcgctgtcgtcattaattacccacaGACCATTTAATCTGTATCCTCATTAATGACA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 3872165 75 + 10587913 GCAGAAAG--T-GAGAAAGATGTTGCTGTCGTCATTAATTACCCACAGACCATTTGATCTGTATCCTCATTAATGACA i colAng1.NW_012114711v1 n 792 C 0 s calJac3.chr15 46049093 75 - 98464013 gcagaaag--t-gagaaagaagttgctgtcgtcattagttacccacaGACCATCTAATCTGTATCCTCATTAATGACA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720722 75 + 27742158 gcagaaag--t-gagaaaaaagttgctgtcatcgttagttacccacaGACCATTTGATCTGTATCCTCATTAATGACA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258114 75 - 4835464 GCAGAAAG--T-GAGAAAGAAGTTGCTGTCGTCGTTAGTTACCCACAGACCATTTAATCTGTATCCTCATTAATGACA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717015 75 + 4093027 gcagaaag--t-gagaaagaagttgctgtcatcgttagttacccacaGACCATTTAATCTGTATCTTCATTAATGACA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11056618 75 + 30473821 acagaaag--t-gagaaagaagttgctgccatcaataatttctcacaGACAAATTAATCTGTACCCAGCCTAAAAGCG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45762759 62 - 149736546 -------------AAAATAAAATTGCAACTGTCACTCATTTGCCACAAACAACT---CCTGTTTCCTCACTGGTGAGT i mm10.chr6 C 0 C 0 s canFam3.chr20 16595319 73 + 58134056 acagaaagaat-aagaaggaagttgctgccatcattagtttcccaca----ATTTAATCTGTACCCCTATCAAGGACA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795458 75 - 2187301 gcaaagag--taggaaaagtagttgcagccatTACTAATTGCCCACAGACAATTTATCCTGTACTTCCATTAGTAAT- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 590732 78 + 2414909 I e micMur3.chr32 1609774 77 - 9149476 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=6040530.000000 s hg38.chrUn_KI270749v1 104420 455 + 158759 TTTTCTCAGCTTGACATACTCTTGGCTTTGACAATTAACAAAAACAGAAGAAATAGAAG-AAAAAAACCAATATGGTATGCAGTAC------------TCATAATTACATTTTCATTTGTGTTGCTATCCTTGAT-----------TACT-----ATACATATAAGAAATTATCTCTCAAGGAAATAAATGATCCTTGT-ATTGCTTCTGGAGATGAAAATCAATGAGTTTACCTTTTGCTAC-AAATATAGCCACTC---TTTTTTTT------TCTTGTAGAC-ATTAAACACCAATTTGTGGAGACAGTTTTGCATATACAAAGG-AATCTGAGCAGCATACCT--GACTCAATATTAATAAATGAAGTTGAAATAGGACCTGTGATTGGTCTGTGATGACAGAAAGCAAATAGCTTTTCCTCCTGATACAACTA-AAAGATTACTTTGCTAAGCATTTATTTCAAGGATTGGCAAAGAAT-GTGTTATAACACACGT s panTro5.chr3 201991636 456 - 202621043 TTTTCTCAGCTTGACATACTCTTGGCTTTGACAATTAACAAAAACAGAAGAAATAGAAGAAAAAAAACCAATATGGTATGCAGTAC------------TCATAATTACATTTTCATTTGTGTTGCTATCCTTGAT-----------TACT-----ATACATATAAGAAATTATCTCTCAAGGAAATAAATCATCCTTGT-ATTGCTTCTGGAGATGAAAATCAATGAGTTTACCTTTTGCTAC-AAATATAGCCACTC---TTTTTTTT------TCTTGTAGAC-ATTAAACACCAATTTGTGGAGACAGTTTTGCATATACAAAGG-AATCTGAGCAGCATACCT--GACTCAATATTAATAAATTAAGTTGAAATAGGACCTGTGATTGGTCTATGATGACAGAAAGCAAATAGCTTTTCCTCCTGATACAACTA-AAAGATTACCTTGCTAAGCATTTATTTCAAGGATTGGCAAAGAAT-GTGTTATAACACAGGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204759659 469 - 205426864 TTTTCTCAGCTTGACATACTCTTGGCTTTGACAATTAACAAAAACAGAAGAAATAGAAG-AAAAAAACCAATATGGTATGCAGTAC------------TCATAATTACATTTTCATTTGTGTTGCTATCCTTGATAGTAATCAAGATACTATCAAATACATACAAGAAATTATCTCTCAAGGAAATAAATCATCCTTGT-ATTGCTTCTGGAGATGAAAATCAGTGAGTTTACCTTTTGCTAC-AAATATAGCCACTC-----CTTTTT------TCTTGTAGAC-ATTAAACACCAATTTGTGGAGACAGTTTTGCATATACAAAGG-AATCTGAGCAGCATACCT--GACTCAATATTAATAAATGAAGTTGAAATAGGACCTGTGATTGGTCTGTGATGACAGAAAGCAAATAGCTTTTCCTCCTGATACAACTA-AAAGATTACCTTGCTAAGCATTTATTTCAAGGATTGGCAAAGAAT-GTGTTATAACACAGGT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576478 453 + 86207423 TTTTCTTAGCTTGATGTACTCTTGGCTTTGACAATTAACAAAAACAGAAGAAACAGAAG--AAAAAACCAATATGGTATGCAGTAC------------TCATAATTACATTTTCATTTGTGTTGTTATCCTTGAT-----------TACT-----ATACATATAAGAAATTATCTCTCAAGGAAGTAAATAATCCTTGT-ATTGTTTCTGGAGATGAAAATCAATGAGTTTACCTTTTGCTAC-AAATATAGCCACTC--TTTTTTTCT------TCTTGTAGAC-ATTAAACACCAATTTGTGCAGACGGTTTTGC--ATACAAAGG-AATCTGAGCAGCATACCT--GACTCAATATTAATAAATGAAGTTGAAATAGGACCTGTGATTGGTCTGTGATGACAGAAAGCAAATAGCTTTTCCTCCTGATACAACTA-AAAGATTACCTTGCTAAGCATTTATTTCAAGTATTGGCAAAGAAT-GTGTTATAACACAGGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059506 454 + 204787373 TTTGTTTAGCTTGATATACTCTTGGCTTTGACAATTAACAAAAATAGAAGAAATAGAAG-GAAAAAAACAATATGGCATGCAGTAG------------TCATAATTACATTTTCATTTGTGTTGCTATCCTTGAT-----------TACT-----ATACATATAAGAAATTATCTGTCAAGGAAATAAATCATCCTTGT-ATTGTTTCCAGAGATGAAAATCAATGAGTTTACCTTTAGCTAC-AAATATAGCCACTC-TTTTTTTTTT------TCCTGTAGAC-ATTAAACATCAATTTGTGGAGACAGTTTTGT--AAACAAAGG-AATCTGAGCAG-ATACCT--GACTCAATATTAATAAATGAAGTTGACATAAGACCTGTGATTGGTCTGTGATGACAGAAAGCAAATAGCTTTTCCTCCTGATACAACTA-AAAGATTACCTTGCTAAGCATTTATTTCAAGGATTGGCAAAGAAT-GTGTTATAACACAGGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991351 453 - 192460366 TTTGTTTAGCTTGATATACTCTTGGCTTTGACAATTAACAAAAATAGAAGAAATAGAAG-GAAAAAAACAATATGGCATGCAGTAG------------TCATAATTACATTTTCATTTGTGTTGCTATCCTTGAT-----------TACT-----ATACATATAAGAAATTATCTGTCAAGGAAATAAATCATCCTTGT-ATTGTTTCCAGAGATGAAAATCAATGAGTTTACCTTTAGCTAC-AAATATAGCCACTC--TTTTTTTTT------TCCTGTAGAC-ATTAAACATCAATTTGTGGAGACAGTTTTGT--AAACAAAGG-AATCTGAGCAG-ATACCT--GACTCAATATTAATAAATGAAGTTGAAATAAGACCTGTGATTGGTCTGTGATGACAGAAAGCAAATAGCTTTTCCTCCTGATACAACTA-AAAGATTACCTTGCTAAGCATTTATTTCAAGGATTGGCAAAGAAT-GTGTTATAACACAGGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103317 452 - 17224310 TTTGTTTAGCTTGATATACTCTTGGCTTTGACAATTAACAAAAATAGAAGAAATAGAAG-GAAAAAAACAATATGGCATGCAGTAG------------TCATAATTACATTTTCATTTGTGTTGCTATCCTTGAT-----------TACT-----ATACATATAAGAAATTATCTGTCAAGGAAATAAATCATCCTTGT-ATTGTTTCCAGAGATGAAAATCAATGAGTTTACCTTTAGCTAC-AAATATAGCCACTC---TTTTTTTT------TCCTGTAGAC-ATTAAACATCAATTTGTGGAGACAGTTTTGT--AAACAAAGG-AATCTGAGCAG-ATACCT--GACTCAATATTAATAAATGAAGTTGAAATAAGACCTGTGATTGGTCTGTGGTGACAGAAAGCAAATAGCTTTTCCTCCTGATACAACTA-AAAGATTACCTTGCTAAGCATTTATTTCAAGGATTGGCAAAGAAT-GTGTTATAACACAGGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415487 452 - 41321030 TTTTTTTAGCTTGATATACTCTTGGCTTTGACAATTAACAAAAATAGAAGAAATAGAAG-GAAAAAAACAATATGGCATGCAGTAG------------TCATAATTACATTTTCATTTGTGTTGCTATCCTTGAT-----------TACT-----ATACATATAAGAAATTATCTGTCAAGGAAATAAATCATCCTTGT-ATTGTTTCCAGAGATGAAAATCAATGAGTTTACCTTTAGCTAC-AAATATAGCCACTC---TTTTTTTT------TCCTGTAGAC-ATTAAACATCAATTTGTGGAGACAGTTTTTT--AAACAAAGG-AATCTGAGCAG-ATACCT--GACTCAATATTAATAAATGAAGTTGAAATAAGACCTGTGATTGGTCTGTGATGACAGAAAGCAAATAGCTTTTCCTCCTGATACAACTA-AAAGATTACATTGCTAAGCATTTATTTCAAGGATTGGCAAAGAAT-GTGCTATAACACAGGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64486949 452 - 101219884 TTTTTTTAGCTTGATATACTCTTGGCTTTGACAATTAACCAAAATAGAAGAAATAGAAG-GAAAAAAACAATACGGCATGCAGTAG------------TCATAATTACATTTTCATTTGTGTTGTTATCCTTGAT-----------TACT-----ATACATATAAGAAATTATCTCTCAAGGAAATAAATCATCCTTGT-ATTGTTTCCAGAGATGAAAATCAATGAGTTTACCTTTAGCTAC-AAATATAGCCACTC---TTTTTTTT------TCCTGTAGAC-ATTAAACATCAATTTGTGGAGACAGTTTTGT--AAACAAAGG-AATCTGAGCAG-ATACCT--GACTCAATATTAATAAATGAAGTTGAAATAAGACCTGTGATTGGTCTGTCATGACAGAAAGCAAATAGTTTTTCCTCCTGATACAACTA-AAAGATTACCTTGCTAAGCATTTATTTCAAGGATTGGCAAAGAAT-GTGTTATAACACAGGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 872928 452 - 924385 TTTTTTTAGCTTGATATACTCTTGGCTTTGACAATTAACAAAAATAGAAGAAATAGAAG-GAAAAAACCAATATGGCATGCAGTAG------------TCATAATTACATTTTCATTTGTGTTGCTATCCTTGAT-----------TACT-----ATACATATAAGAAATTATCTGTCAAGGAAATAAATCATCCTTGT-ATTGTTTCCAGAGATGAAAATCAATGAGTTTACCTTTAGCTAC-AAATATAGCCACTC---TTTTTTTT------TTTTGTAGAC-ATTAAACATCAATTTGTGGAGACAGTTTTGT--AAACAAAGG-AATCTGAGCAG-ATACCT--GACTCAATATTAATAAATGAAGTTGAAGTAAGACCTGTGATTGGTCTGTGATGACAGAAAGCAAATAGCTTTTCCTCCTGATACAACTA-AAAGATTACCTTGCTAAGCATTTATTTCAAGGATTGGCAAAGAAT-GTGTTATAACACAGGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 3872240 452 + 10587913 TTTTTTTAGCTTGATATACTCTTGGCTTTGACAATTAACAAAAATGGAAGAAATAGAAG-GAAAAAAACAATATGGCATTCAGTAG------------TCATAATTATATTTTCATTTGGGTTGCTATCCTTGAT-----------TACT-----ATAAATATAAGAAATTATCTCTCAAGGAAATAAAGCATCCTTGT-ATTGTTTCCAGAGATGAAAATTAATGAGTTTACCTTTAGCTAC-AGATATAGCCACTC---TTTTTATT------TTCTGTAGAC-ATTAAACATCAATTTGTGGAGACAGTTTTGT--AAACAAAGG-AATCTGAGCAG-ATACCT--GACTCAATATTAATAAATGAAGTTGAAATAGGACCCGTGATTGGTCTGTGATGACAGAAAGCAAATAGCTTTTCCTCCTGATACAACTA-AAAGATTACCTTGCTAAGCATTTATTTCAAGGATTGGCAAAGAAT-GTGTTATAACACAGGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46049168 453 - 98464013 TTTCCTTAGCTTGACACACTCTTTGTTTTGACGATTAACAAAAGCAGAAAAAATCGGAA-AAAAAACCGAATACCATATGCAGTAG------------TCATAATTACATTTTCACATGTGTTGCTACCCTTGAT-----------TACT-----ATACATATAAGAAGTTATCTCTCAAAGAAATAAATCATCCTTGTAATTGCTTTTGGAGATGAAAATCAATGAGTTTACCTTTAGCTAC-AAATACAGCCACTCTTTTTTTTTTT------TCTTGTAGAC----AAACACCAATTTGTGGGGTCAGTTTTGC--ATACAGAGG-AATCTGAGCAGCATACCT--GACTCAA-ATTAATAAATGAAGTTAAAATAGGATCTGTGACTGGTCTGTGATGACAGAAAGCAAATAGTTTTTCCTCCCAATACAACTA-AAAGATTACCTTGCTAAGCAGTTATTTCAAGGATTGGGAAAAAAT-GTGTTATAATACAGGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27720797 447 + 27742158 TTTCCTTAGGCTGACACACTCTTTGTTTTGACAATTAACAAAAACAGAAAAAATAGGAA-AAAAA----AATATGATATGCAGTAG------------TCATAATTACATTTTCACATGTGTTGCTATCCTTGAT-----------TACT-----CTACATATAAGAAGTTATCTCTCAAGGAAATAAATCATCCTTGTAATTGTTTTCGGAGATGAAAATCAATGAGTTTACCTTTAGCTAC-AAATACAGCCACTC-TTCTTTTTTT------TCTCGTAGAC----AAACACCAATTTGTGGAGTCAGTTTTGC--ATACAGAGG-AATCTGAGCAGCATACCT--GACTCAA-ATTAATAAATGAAGTTAAAATAGGATCTGTGATTGGTCTGTGATGACAGAAAGCAAACAGTTTTTCCTCCCAATACAACT--AAATATTACCTTGCTAAGCAGTTATTTCAAGGATTGGGAAAGAAT-GTGTTATAATACAGGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258189 447 - 4835464 TTTCCTTAGCTTGACACACTCTTTGTTTTGACAATTAACAAAAACAGAAGAAATAGGAA-AAAAA----AATACTGTATGCAGTAG------------TCATAATTACATTTTCACATGTGTTGCTATCCTTAAT-----------TACT-----ATGCATATAAGAAGTTATCTCTCAAGGAAATAAATCATCCTTGTAATTGTTTTCGGAGATGAAAATCAATGAGTTTACCTTTAGCTAC-AAATACAGCCACTC--TTTTTCTTT------TCTTGTAAAC----AAACACCAATTTGTGAAGTCAGTTTTGC--ATACAGAGG-AATCTGAGCAGCATACCT--GACTCAA-ATTAATAAATGAAGTTAAAATAGGATCTGTGATTGGTCTGTGATGACAGAAAGCAAATAGTTTTTCCTCCCAATACAACAT-AAAGATTACCTTGCTAAGCAGTTATTTCAAGGATTGGGAAAGAAT-GTGTTATAATACAGGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717090 448 + 4093027 TTTCCTTAGCTTGACACAGTCTTTGTTTTGACAATTAACAAAAACAGAAGAAAAAAAAC-AAAACC---AATACGGTATGCAGTAG------------TCATAATTACATTTTCACATGTGTTGTTATCCTGGAT-----------TACT-----ATACATATAAGAAGTTATCTCTCAAGGAAATAAATCATCCTCGTAATTGTTTTCGGAGATGAAAATCAATGAGTTTACCTTTAGCTAC-AAATACAGCCACTC--TTTTTTTTT------TCTTGTAGAC----AAACACCAATTTGTGGAGTCAGTTTTGC--ATACAGAGG-AATCTGAGCAGCATACCT--GACTCAA-ATTAATAAATGAAGTTAAAATAGAATCTGTGATTGGTCTGTGATGACAGAAAGCAAATAGTTTTTCCTCGCAATACAACTA-AAAGATTACCTTGCTAAGCAGTTATTTCAAGGATTGGGAAAGAAT-GTGTTATAATACAGGT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1609851 451 - 9149476 TTTTCTCACTTTGATATACTGTTTGATTTGACAATTAATGTAAACCAAAGAAAAAGAAG-AAAAAAA--TATATAGTCCTGAGTAG------------TCATAATTATATTTTCATTTGTGTCCCTATCCTTGAT-----------TACT-----ATACATGTAAGAAACAATCTCTCAAGGAAATAAATCATT-TTGTAATTATTTTCTGACATGAAAATCAATGAGTTTACCTTTAGCTACAAAATGCATCCACCT-----TTTTTT------TCTTGTAGACAATTAAACACCAATTTGTGGAGATAGGTTTGC--ATACAGAGG-CATCTGAGCAGCATCCAT--GACTCAATATTAGTAAGTGAAGTTGGAATAGGACATGTGATTGGTCT-TAATGACAGAAAGCAGATAGCTTCCCCTCCGAGTGCAACTG-AAAGATTAGCTTGCTAAGCATTTATTTCAAGGATTGGGGAAGAATGGTGTTATAACATAAAT i micMur3.chr32 I 77 C 0 s proCoq1.NW_012148064v1 590810 450 + 2414909 TTTTCTCACTTTGATATACTGTTCGATTTGATAATTAATATAAACCAAAGAAAAAGAAG-AAAAAA----ATACAGTACTCAGTAG------------TCATAATTACATTTTCATTTGTGTCCCTATCCTTGAT-----------TACT-----ATACATGTAAGAAACAATCTCTCAAGGAAATAAATCATTCCTGTAATTATTTTCTGACATGAAAATCAATGAGTTTACTTTTAGCTACAAAATACATCCACC------TTTTTT------TCTTGTAGACAATTAAACACCAATTTGTGGAGACAGATTTGC--ATACAAAGG-CATCTGAGCAACATCCAT--GACTCAATATTAATAAGTGAAGTTGGAAGAGGACCTGTGTTTCGTCTGTGATAACAGAAAGCAGATAGCTTCTCCTCCTAGTGCAACTG-AAAAGTTAGCTTGCTAAGCATTTATTTCAAGGATTGGGAAAGAATGGTGTTATAACATAGAT i proCoq1.NW_012148064v1 I 78 C 0 s otoGar3.GL873534 11056693 447 + 30473821 -GCTCTCAGTTCAATGTACTGTTTGATTGGACAATTAATAAAAACAAAAGAAAATGAAG-AAAAAA----ATACAGTTCACAGTAG------------TCATAATTGCA--TTCATTTGTGTCCCTATCCTTGAT-----------TACT-----ATACATGTAAGAAACACTCTCTCAAGGAAATAAATCATTCCTGTAATTATTTTCTGACATGAGAATCAATGAGTTTACCTTCAGCTACAAAATACATTCGCT------TTTTTT------TCTGCTAGAAAATTAAACACCAATTTGTGGAGATGGATTTGC--ATACAAAGGAAATCTGAGCAGCATTTGT--GACTCAA-AATAATAAATGAAATTGGAGTAGGACCAGTGATTGTGCTGTGATGACAGAAAGCAGATAGCTTCTCCTTCTAGTACAACTG-AAAGATTACCTTGCTAAGCATATATTTCAAACATCGGGAAGGAATGGTGTTACAACGTAGCT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45762821 439 - 149736546 TTTTCATAGTTAGGAGTAGT-----TTTTGAC----ACCACAGACAAAAGAAGAAAAGG-ACA-----CGACTCAGCATGGAGTAG------------TGATAATTACATTTTCATTTGTGTGTCTGCCCTTCAT-----------TACC-----ATACATATAAGAAACAATCTATCAAAAAATCAAACCATCCCTATAATTGTTTTCTGAGGTGAAAATCGATGTGTTTACTTTTTGCTTC-AAA---ATCCTCAC--------TTTAAAAAATCTTATAGACAATTAAACACCAATTTATGGAGAAAGCTTTGT--ATATAAAAG-ACTAC-AGTAA-ACACCTAGGAGTCAATATTAAGACATGAAACAGAAAT-GGGTCTCTGATTGGCCTCTGGTGATGCAAAGCAGACA-CATGTCTTCTATGTTCAACCACAAAAATAACCTTACTAAATATTTATTTCAAGAATTATCAAACAATGGGATAATAGGATAGGT i mm10.chr6 C 0 C 0 s canFam3.chr20 16595392 453 + 58134056 TTGCTCCCATTTGACATAATGTTTGATCTGACAATTAATAAAATCA--------------AAATTGCACAATACACCACACAGTAGTAacaattacatttacaattacatttacaTTTGTGTCTTTGTTCTCTAT-----------TACT-----CTACAAATAAGAAACAATTTATCAAGGAAACAAACCATCTCTATAATTGTTTTCTGAGATGAGAATCAATGAGTTTACCATTGGCTAC-AAA-ATACATAATC---TTTTTTTA------ATATATAGACAATTAAACACTAATTTTTGGAGACAAAATTGC--AGACAAAGG-ATTCTGAGCTACATCCAT--GACTCAATATTAATAAATGAAGTTGGAATAAGACCTGTGATTGGTCTATGATGACAGAAAGCAGATAGCTACTTCTCCTAGTAAAACT--GAAGAATACCTAACTAAGCATTCATTTCAAGGACTGGGAAGGAATTTTGTTATAACATAGGT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795533 437 - 2187301 TTTTCCCAGTTTAGCATAATACTGCATTTGACAATTTA-AAAAAGAAAAGAAAAGGAAA---------TAATAGAGTATACAGTAG------------TCCT-ATTA-ATTGTCATTTGTGTTCCAGTTCTTGAT-----------TACT-----ATACATTCAA-------TCTATAAAGGAAATAAAACATCCCTGTAATTGTTTCCTAAGGTGAGAATCAGTGCGTTTATCTTTAGGTACAAAATACACCCACCT---TGTTTTTT------TCTTGTAGAC-AATAAACACTAATTTGTGGACACAAATTGGT--AGACAAAGG-AATCTGAATGGCATCCAT--GACTCAACATTAATAAATGAAGTTGGAATAGAATGTATGAGTGGT-TGTGATGACAGGAAACAGATAGCTACCCCTTCTAGTACAAATG-AAAGATTACCTTGCTAAGCATTTATTTAAAGGACTGAGAATGAATGGCATTATAAAATAGGT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 167855 3892 + 958716 I a score=20349.000000 s hg38.chrUn_KI270749v1 104875 1 + 158759 C s panTro5.chr3 201992092 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760128 1 - 205426864 C i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576931 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059960 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991804 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103769 1 - 17224310 C i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415939 1 - 41321030 C i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487401 1 - 101219884 C i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873380 1 - 924385 C i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 3872692 1 + 10587913 C i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46049621 1 - 98464013 C i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721244 1 + 27742158 C i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258636 1 - 4835464 C i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717538 1 + 4093027 C i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 171747 1 + 958716 C i tarSyr2.KE939134v1 I 3892 I 151 s micMur3.chr32 1610302 1 - 9149476 C i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 591260 1 + 2414909 C i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11057140 1 + 30473821 C i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45763260 1 - 149736546 T i mm10.chr6 C 0 C 0 s canFam3.chr20 16595845 1 + 58134056 C i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795970 1 - 2187301 C i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I a score=510324.000000 s hg38.chrUn_KI270749v1 104876 39 + 158759 TGTAGGCATAATGGAAGA--AATGCCTTGAG-CGTCATTCAA s panTro5.chr3 201992093 39 - 202621043 TGTAGGCATAATGGAAGA--AATGCCTTGAG-CGTCATTCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760129 39 - 205426864 TGTAGGCATAATGGAAGA--AATGCCTTGAG-CGTCGTTCAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576932 39 + 86207423 TTTAGGCATAATGGAAGA--AATGCCTTGAG-CATCATTCAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66059961 39 + 204787373 TGTATGCATAATGGAATA--AACGCCTTGAG-TGTCATTCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991805 39 - 192460366 TGTATGCATAATGGAATA--AACGCCTTGAG-TGTCATTCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103770 39 - 17224310 TGTATGCATAATGGAATA--AACGCCTTGAG-TGTCATTCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415940 39 - 41321030 TGTATGCATAATGGAATA--AACGCCTTGAG-TGTCATTCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487402 39 - 101219884 TGTATGCATAATGGATTA--AACGCCTTGAG-TGTCATTCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873381 39 - 924385 TGTATGCATAATGGAATA--AACACCTTGAG-TGTCATTCAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 3872693 39 + 10587913 TGTATGCGTAACGGAACA--AACACCTTGAG-TGTCATTCAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46049622 39 - 98464013 TTTATGGGTAATGGAATA--AATGCCTTGAG-CATCATTCAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721245 39 + 27742158 TGTATGCATAATGGAATA--AATGCCTTGAG-CATCATTCAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258637 39 - 4835464 TGTATGCATAGTGGAATA--AATGCCTTGAG-CATCATTCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717539 39 + 4093027 TGTATGCATAATGGAATA--AATGCCTTGAG-CGTCATTCAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610303 39 - 9149476 TGTATGCATAAGGGAATA--CATGCTTTGAA-CCTCATTCAA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 591261 39 + 2414909 TGTATGCATAACGGAATA--AATGCTTTGAA-CCTCATTCAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11057141 39 + 30473821 TGTCTGTATAAGGGACTA--TATGCCTTGAA-CCTCATTTAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45763261 41 - 149736546 TGCATGCATAAAAAGACAGTACCTCCTCCAC-CATCTTTCCA i mm10.chr6 C 0 C 0 s canFam3.chr20 16595846 39 + 58134056 TGTATGTATAATGAAATA--TATGCCTTGAA-TACTCTTGAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1795971 41 - 2187301 TGTGTGCAAAATGGAAAAA-AATGCCTTGAATCCTCATTCAA i dasNov3.JH563077 C 0 I 9391 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I a score=54159.000000 s hg38.chrUn_KI270749v1 104915 4 + 158759 AGGA--- s panTro5.chr3 201992132 4 - 202621043 AGGA--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760168 4 - 205426864 AGGA--- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576971 4 + 86207423 AGGA--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060000 4 + 204787373 AGGA--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991844 4 - 192460366 AGGA--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103809 4 - 17224310 AGGA--- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415979 4 - 41321030 AGGA--- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487441 4 - 101219884 AGGA--- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873420 4 - 924385 AGGA--- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 3872732 4 + 10587913 AGGA--- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46049661 4 - 98464013 AGGA--- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721284 4 + 27742158 AGGA--- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258676 4 - 4835464 AGGA--- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717578 4 + 4093027 AGGA--- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610342 4 - 9149476 AGGA--- i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 591300 4 + 2414909 AGGA--- i proCoq1.NW_012148064v1 C 0 I 379 s otoGar3.GL873534 11057180 4 + 30473821 AGGA--- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45763302 4 - 149736546 AAGA--- i mm10.chr6 C 0 I 3 s canFam3.chr20 16595885 7 + 58134056 ACAAAGA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I e dasNov3.JH563077 1796012 9391 - 2187301 I a score=109934.000000 s hg38.chrUn_KI270749v1 104919 10 + 158759 AGGATAGA--GA s panTro5.chr3 201992136 10 - 202621043 AGGATAGA--GA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760172 10 - 205426864 AGGATAGA--GA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576975 10 + 86207423 AGGATAGA--GA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060004 10 + 204787373 AGGATAGA--GA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991848 10 - 192460366 AGGATAGA--GA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103813 10 - 17224310 AGGATAGA--GA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415983 10 - 41321030 AAGATAGA--GA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487445 10 - 101219884 AGGATAGA--GA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873424 10 - 924385 AAGATAGA--GA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 3872736 10 + 10587913 AGGATAGA--GA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46049665 10 - 98464013 GGGTTAGA--GA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721288 11 + 27742158 AGGATAGA-GGA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258680 10 - 4835464 GGGATAGA--GA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717582 10 + 4093027 GGGATAGA--GA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610346 10 - 9149476 GGGATAGA--GA i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11057184 10 + 30473821 GGGATAAA--TA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45763309 10 - 149736546 GGAGCAGA--CA i mm10.chr6 I 3 C 0 s canFam3.chr20 16595892 12 + 58134056 AGGATAAATGGA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I e dasNov3.JH563077 1796012 9391 - 2187301 I a score=44682.000000 s hg38.chrUn_KI270749v1 104929 4 + 158759 AAAA s panTro5.chr3 201992146 4 - 202621043 AAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760182 4 - 205426864 AAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576985 4 + 86207423 AAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060014 4 + 204787373 AAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991858 4 - 192460366 AAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103823 4 - 17224310 AAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415993 4 - 41321030 AAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487455 4 - 101219884 AAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873434 4 - 924385 AAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 3872746 4 + 10587913 AAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46049675 4 - 98464013 AAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721299 4 + 27742158 AAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258690 4 - 4835464 AAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717592 4 + 4093027 AAAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610356 4 - 9149476 AAAA i micMur3.chr32 C 0 I 55 s otoGar3.GL873534 11057194 4 + 30473821 AAGA i otoGar3.GL873534 C 0 I 3 s mm10.chr6 45763319 3 - 149736546 ATA- i mm10.chr6 C 0 I 2 s canFam3.chr20 16595904 4 + 58134056 GAAA i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1805403 4 - 2187301 AGAA i dasNov3.JH563077 I 9391 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I a score=1800.000000 s hg38.chrUn_KI270749v1 104933 7 + 158759 --ATATA--TA s panTro5.chr3 201992150 7 - 202621043 --AAATA--TA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760186 7 - 205426864 --ATATA--TA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576989 7 + 86207423 --ATATA--TA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060018 5 + 204787373 --TCATA---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991862 5 - 192460366 --TCATA---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103827 5 - 17224310 --TCATA---- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17415997 5 - 41321030 --TCATA---- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487459 5 - 101219884 --TCATA---- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873438 5 - 924385 --TCATA---- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 3872750 7 + 10587913 --ACAtata-- i colAng1.NW_012114711v1 C 0 n 0 s calJac3.chr15 46049679 7 - 98464013 --ACATA--TA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721303 7 + 27742158 --ACATA--TA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258694 7 - 4835464 --ACATA--TA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717596 7 + 4093027 --ACATA--TA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11057201 5 + 30473821 --ACATA---- i otoGar3.GL873534 I 3 I 90 s mm10.chr6 45763324 5 - 149736546 --ACATA---- i mm10.chr6 I 2 C 0 s canFam3.chr20 16595910 5 + 58134056 --GTACA---- i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1805407 7 - 2187301 ATATATA---- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I a score=67029.000000 s hg38.chrUn_KI270749v1 104940 9 + 158759 TAGAATCAA s panTro5.chr3 201992157 9 - 202621043 TAGAATCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760193 9 - 205426864 TAGAATCAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67576996 9 + 86207423 TAGAACCAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060023 9 + 204787373 TAGAATCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991867 9 - 192460366 TAGAATCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103832 9 - 17224310 TAGAATCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416002 9 - 41321030 TAGAATCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487464 9 - 101219884 TAGAATCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873443 9 - 924385 TAGAATCAA i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46049686 9 - 98464013 TAGAATCAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721310 9 + 27742158 TGGAATCAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258701 9 - 4835464 TAGAATCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717603 9 + 4093027 TAGAATCAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11057296 9 + 30473821 ccgagtcaa i otoGar3.GL873534 I 90 I 125 s mm10.chr6 45763329 8 - 149736546 CAGGTGTA- i mm10.chr6 C 0 C 0 s canFam3.chr20 16595915 9 + 58134056 TAAAGGGAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1805414 7 - 2187301 AAGAATA-- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=45778.000000 s hg38.chrUn_KI270749v1 104949 4 + 158759 TGTA s panTro5.chr3 201992166 4 - 202621043 TGTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760202 4 - 205426864 TGTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577005 4 + 86207423 TACA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060032 4 + 204787373 TATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991876 4 - 192460366 TATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103841 4 - 17224310 TATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416011 4 - 41321030 TATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487473 4 - 101219884 TATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873452 4 - 924385 TATA i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46049695 4 - 98464013 TATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721319 4 + 27742158 TATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258710 4 - 4835464 TATA i cebCap1.NW_016107467v1 C 0 I 46 s aotNan1.NW_018502033v1 3717612 4 + 4093027 TATA i aotNan1.NW_018502033v1 C 0 I 48 s otoGar3.GL873534 11057430 4 + 30473821 tgta i otoGar3.GL873534 I 125 C 0 s mm10.chr6 45763337 4 - 149736546 TGTA i mm10.chr6 C 0 C 0 s canFam3.chr20 16595924 4 + 58134056 TATA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1805421 4 - 2187301 TATA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=38775.000000 s hg38.chrUn_KI270749v1 104953 4 + 158759 TTTT s panTro5.chr3 201992170 4 - 202621043 TTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760206 4 - 205426864 TTTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577009 4 + 86207423 TTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060036 4 + 204787373 TTTT i rheMac8.chr2 C 0 I 63 s macFas5.chr2 60991880 4 - 192460366 TTTT i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11103845 4 - 17224310 TTTT i macNem1.NW_012018021v1 C 0 I 63 s cerAty1.NW_012009469v1 17416015 4 - 41321030 TTTT i cerAty1.NW_012009469v1 C 0 I 63 s chlSab2.chr22 64487477 4 - 101219884 TTTT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 873456 4 - 924385 TTTT i manLeu1.NW_012098965v1 C 0 I 63 s calJac3.chr15 46049699 4 - 98464013 TTTT i calJac3.chr15 C 0 I 4 s saiBol1.JH378125 27721323 4 + 27742158 TTTT i saiBol1.JH378125 C 0 I 4 s otoGar3.GL873534 11057434 4 + 30473821 ctgt i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45763341 4 - 149736546 TTTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16595928 4 + 58134056 TTTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1805425 4 - 2187301 TTTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I e aotNan1.NW_018502033v1 3717616 48 + 4093027 I e cebCap1.NW_016107467v1 258714 46 - 4835464 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=736.000000 s hg38.chrUn_KI270749v1 104957 4 + 158759 AATG s panTro5.chr3 201992174 4 - 202621043 AACA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760210 4 - 205426864 AACA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577013 4 + 86207423 AACA i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60991885 4 - 192460366 AATA i macFas5.chr2 I 1 C 0 s chlSab2.chr22 64487482 4 - 101219884 AATA i chlSab2.chr22 I 1 C 0 s calJac3.chr15 46049707 3 - 98464013 aat- i calJac3.chr15 I 4 C 0 s saiBol1.JH378125 27721331 4 + 27742158 AGta i saiBol1.JH378125 I 4 C 0 s otoGar3.GL873534 11057438 4 + 30473821 gatg i otoGar3.GL873534 C 0 I 27 s mm10.chr6 45763345 4 - 149736546 AAGA i mm10.chr6 C 0 C 0 s canFam3.chr20 16595932 1 + 58134056 -A-- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1805429 4 - 2187301 AATG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1372512 954 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1226760 954 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I e manLeu1.NW_012098965v1 873460 63 - 924385 I e macNem1.NW_012018021v1 11103849 63 - 17224310 I e rheMac8.chr2 66060040 63 + 204787373 I e aotNan1.NW_018502033v1 3717616 48 + 4093027 I e cebCap1.NW_016107467v1 258714 46 - 4835464 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I e cerAty1.NW_012009469v1 17416019 63 - 41321030 I a score=16371.000000 s hg38.chrUn_KI270749v1 104961 4 + 158759 GTAA s panTro5.chr3 201992178 4 - 202621043 GTAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760214 4 - 205426864 GTAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577017 4 + 86207423 GTAA i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60991889 4 - 192460366 GTAA i macFas5.chr2 C 0 I 25 s chlSab2.chr22 64487486 4 - 101219884 GTAA i chlSab2.chr22 C 0 I 25 s rhiRox1.KN296641v1 1373466 4 - 1467263 GTAA i rhiRox1.KN296641v1 I 954 I 71 s rhiBie1.NW_016820128v1 1227714 4 - 2311269 GTAA i rhiBie1.NW_016820128v1 I 954 I 36 s calJac3.chr15 46049710 2 - 98464013 --aa i calJac3.chr15 C 0 I 2 s saiBol1.JH378125 27721335 2 + 27742158 --aa i saiBol1.JH378125 C 0 I 2 s otoGar3.GL873534 11057469 4 + 30473821 gtga i otoGar3.GL873534 I 27 C 0 s mm10.chr6 45763349 4 - 149736546 TTAA i mm10.chr6 C 0 I 5 s dasNov3.JH563077 1805433 4 - 2187301 CTAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e micMur3.chr32 1610360 55 - 9149476 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e tarSyr2.KE939134v1 171748 151 + 958716 I e manLeu1.NW_012098965v1 873460 63 - 924385 I e macNem1.NW_012018021v1 11103849 63 - 17224310 I e rheMac8.chr2 66060040 63 + 204787373 I e aotNan1.NW_018502033v1 3717616 48 + 4093027 I e cebCap1.NW_016107467v1 258714 46 - 4835464 I e canFam3.chr20 16595933 0 + 58134056 C e colAng1.NW_012114711v1 3872757 0 + 10587913 I e cerAty1.NW_012009469v1 17416019 63 - 41321030 I a score=-6348.000000 s hg38.chrUn_KI270749v1 104965 4 + 158759 CA-------------------GT s panTro5.chr3 201992182 4 - 202621043 CA-------------------GT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760218 4 - 205426864 CA-------------------GT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577021 23 + 86207423 AATATattgttaaattttaatat i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60991918 4 - 192460366 CA-------------------AT i macFas5.chr2 I 25 C 0 s chlSab2.chr22 64487515 4 - 101219884 CA-------------------AT i chlSab2.chr22 I 25 C 0 s calJac3.chr15 46049714 4 - 98464013 ta-------------------ta i calJac3.chr15 I 2 C 0 s saiBol1.JH378125 27721339 4 + 27742158 ta-------------------aa i saiBol1.JH378125 I 2 C 0 s otoGar3.GL873534 11057473 4 + 30473821 ca-------------------ct i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45763358 4 - 149736546 CA-------------------AA i mm10.chr6 I 5 C 0 s dasNov3.JH563077 1805437 4 - 2187301 AA-------------------GT i dasNov3.JH563077 C 0 I 9810 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1373470 71 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1227718 36 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I e manLeu1.NW_012098965v1 873460 63 - 924385 I e macNem1.NW_012018021v1 11103849 63 - 17224310 I e rheMac8.chr2 66060040 63 + 204787373 I e aotNan1.NW_018502033v1 3717616 48 + 4093027 I e cebCap1.NW_016107467v1 258714 46 - 4835464 I e canFam3.chr20 16595933 0 + 58134056 C e colAng1.NW_012114711v1 3872757 0 + 10587913 I e cerAty1.NW_012009469v1 17416019 63 - 41321030 I a score=6076.000000 s hg38.chrUn_KI270749v1 104969 7 + 158759 CTTTTAA s panTro5.chr3 201992186 7 - 202621043 CTTTTAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760222 7 - 205426864 CTTTTAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577044 7 + 86207423 cttttaa i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60991922 5 - 192460366 C--TTAA i macFas5.chr2 C 0 C 0 s chlSab2.chr22 64487519 7 - 101219884 CTGTTAA i chlSab2.chr22 C 0 C 0 s calJac3.chr15 46049718 7 - 98464013 tttttat i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27721343 7 + 27742158 ttgttat i saiBol1.JH378125 C 0 I 1 s otoGar3.GL873534 11057477 7 + 30473821 ctgtctc i otoGar3.GL873534 C 0 I 8 s mm10.chr6 45763362 7 - 149736546 CTTGtac i mm10.chr6 C 0 C 0 s canFam3.chr20 16595933 2 + 58134056 -----AA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1373470 71 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1227718 36 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I e manLeu1.NW_012098965v1 873460 63 - 924385 I e macNem1.NW_012018021v1 11103849 63 - 17224310 I e rheMac8.chr2 66060040 63 + 204787373 I e aotNan1.NW_018502033v1 3717616 48 + 4093027 I e cebCap1.NW_016107467v1 258714 46 - 4835464 I e dasNov3.JH563077 1805441 9810 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I e cerAty1.NW_012009469v1 17416019 63 - 41321030 I a score=3276.000000 s hg38.chrUn_KI270749v1 104976 1 + 158759 T s panTro5.chr3 201992193 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760229 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577051 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60991927 1 - 192460366 T i macFas5.chr2 C 0 I 1 s chlSab2.chr22 64487526 1 - 101219884 T i chlSab2.chr22 C 0 I 1 s rhiBie1.NW_016820128v1 1227754 1 - 2311269 T i rhiBie1.NW_016820128v1 I 36 I 34 s mm10.chr6 45763369 1 - 149736546 t i mm10.chr6 C 0 C 0 s canFam3.chr20 16595935 1 + 58134056 T i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1373470 71 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e tarSyr2.KE939134v1 171748 151 + 958716 I e otoGar3.GL873534 11057484 8 + 30473821 I e manLeu1.NW_012098965v1 873460 63 - 924385 I e macNem1.NW_012018021v1 11103849 63 - 17224310 I e rheMac8.chr2 66060040 63 + 204787373 I e aotNan1.NW_018502033v1 3717616 48 + 4093027 I e cebCap1.NW_016107467v1 258714 46 - 4835464 I e dasNov3.JH563077 1805441 9810 - 2187301 I e saiBol1.JH378125 27721350 1 + 27742158 I e calJac3.chr15 46049725 1 - 98464013 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I e cerAty1.NW_012009469v1 17416019 63 - 41321030 I a score=-2316.000000 s hg38.chrUn_KI270749v1 104977 1 + 158759 G s panTro5.chr3 201992194 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760230 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577052 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60991929 1 - 192460366 T i macFas5.chr2 I 1 C 0 s chlSab2.chr22 64487528 1 - 101219884 T i chlSab2.chr22 I 1 C 0 s calJac3.chr15 46049726 1 - 98464013 t i calJac3.chr15 I 1 I 13 s saiBol1.JH378125 27721351 1 + 27742158 t i saiBol1.JH378125 I 1 I 11 s otoGar3.GL873534 11057492 1 + 30473821 a i otoGar3.GL873534 I 8 C 0 s mm10.chr6 45763370 1 - 149736546 g i mm10.chr6 C 0 C 0 s canFam3.chr20 16595936 1 + 58134056 G i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1373470 71 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1227755 34 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I e manLeu1.NW_012098965v1 873460 63 - 924385 I e macNem1.NW_012018021v1 11103849 63 - 17224310 I e rheMac8.chr2 66060040 63 + 204787373 I e aotNan1.NW_018502033v1 3717616 48 + 4093027 I e cebCap1.NW_016107467v1 258714 46 - 4835464 I e dasNov3.JH563077 1805441 9810 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I e cerAty1.NW_012009469v1 17416019 63 - 41321030 I a score=4664.000000 s hg38.chrUn_KI270749v1 104978 1 + 158759 T s panTro5.chr3 201992195 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760231 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577053 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60991930 1 - 192460366 T i macFas5.chr2 C 0 C 0 s chlSab2.chr22 64487529 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s calJac3.chr15 46049740 1 - 98464013 t i calJac3.chr15 I 13 C 0 s cebCap1.NW_016107467v1 258760 1 - 4835464 T i cebCap1.NW_016107467v1 I 46 C 0 s aotNan1.NW_018502033v1 3717664 1 + 4093027 T i aotNan1.NW_018502033v1 I 48 C 0 s otoGar3.GL873534 11057493 1 + 30473821 t i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45763371 1 - 149736546 t i mm10.chr6 C 0 I 4676 s canFam3.chr20 16595937 1 + 58134056 C i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1373470 71 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1227755 34 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I e manLeu1.NW_012098965v1 873460 63 - 924385 I e macNem1.NW_012018021v1 11103849 63 - 17224310 I e rheMac8.chr2 66060040 63 + 204787373 I e dasNov3.JH563077 1805441 9810 - 2187301 I e saiBol1.JH378125 27721352 11 + 27742158 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I e cerAty1.NW_012009469v1 17416019 63 - 41321030 I a score=1599.000000 s hg38.chrUn_KI270749v1 104979 20 + 158759 TTATTAAA----------------AATAAAATG-----------TTT s panTro5.chr3 201992196 20 - 202621043 TTATTAAA----------------AATAAAATA-----------TTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760232 20 - 205426864 TTATTAAA----------------AATAAAATA-----------TTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577054 19 + 86207423 ttattaaa----------------aataaaata------------tt i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60991931 16 - 192460366 TTATTAAA----------------ATAAAATT--------------- i macFas5.chr2 C 0 C 0 s chlSab2.chr22 64487530 16 - 101219884 TTATTAAA----------------ATAAAAAT--------------- i chlSab2.chr22 C 0 C 0 s calJac3.chr15 46049741 19 - 98464013 ttattaaa----------------a-taaaata-----------ttt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721363 6 + 27742158 -----------------------------aata-----------tt- i saiBol1.JH378125 I 11 C 0 s cebCap1.NW_016107467v1 258761 19 - 4835464 TTATTAAA----------------A-TAAAATA-----------TTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717665 19 + 4093027 TTATTAAC----------------A-TAAAATA-----------TTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11057494 47 + 30473821 taattaaattaattttGTAAGAAGAAAAAAATAGAATAAATATGTTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16595938 13 + 58134056 ----TGAA----------------AACATGGCA-------------- i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1373470 71 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1227755 34 - 2311269 I e tarSyr2.KE939134v1 171748 151 + 958716 I e manLeu1.NW_012098965v1 873460 63 - 924385 I e macNem1.NW_012018021v1 11103849 63 - 17224310 I e rheMac8.chr2 66060040 63 + 204787373 I e dasNov3.JH563077 1805441 9810 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I e cerAty1.NW_012009469v1 17416019 63 - 41321030 I a score=6319.000000 s hg38.chrUn_KI270749v1 104999 4 + 158759 TAAT s panTro5.chr3 201992216 4 - 202621043 TAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760252 4 - 205426864 TAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577073 4 + 86207423 taat i nomLeu3.chr21 C 0 C 0 s calJac3.chr15 46049760 4 - 98464013 taaa i calJac3.chr15 C 0 C 0 s cebCap1.NW_016107467v1 258780 4 - 4835464 TAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717684 4 + 4093027 TAAA i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 171899 4 + 958716 taac i tarSyr2.KE939134v1 I 151 C 0 s otoGar3.GL873534 11057541 4 + 30473821 TATG i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1373470 71 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1227755 34 - 2311269 I e manLeu1.NW_012098965v1 873460 63 - 924385 I e macNem1.NW_012018021v1 11103849 63 - 17224310 I e rheMac8.chr2 66060040 63 + 204787373 I e canFam3.chr20 16595951 0 + 58134056 C e dasNov3.JH563077 1805441 9810 - 2187301 I e saiBol1.JH378125 27721369 0 + 27742158 C e colAng1.NW_012114711v1 3872757 0 + 10587913 I e chlSab2.chr22 64487546 0 - 101219884 C e cerAty1.NW_012009469v1 17416019 63 - 41321030 I e macFas5.chr2 60991947 0 - 192460366 C a score=20719.000000 s hg38.chrUn_KI270749v1 105003 4 + 158759 TTTA s panTro5.chr3 201992220 4 - 202621043 TTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760256 4 - 205426864 TTTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577077 4 + 86207423 ttta i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060103 4 + 204787373 TTTT i rheMac8.chr2 I 63 C 0 s macFas5.chr2 60991947 4 - 192460366 TTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103912 4 - 17224310 TTTA i macNem1.NW_012018021v1 I 63 C 0 s cerAty1.NW_012009469v1 17416082 4 - 41321030 TTTT i cerAty1.NW_012009469v1 I 63 C 0 s chlSab2.chr22 64487546 4 - 101219884 TTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873523 4 - 924385 TTTA i manLeu1.NW_012098965v1 I 63 C 0 s calJac3.chr15 46049764 4 - 98464013 ttta i calJac3.chr15 C 0 C 0 s cebCap1.NW_016107467v1 258784 4 - 4835464 TTTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717688 4 + 4093027 TTTA i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 171903 4 + 958716 agta i tarSyr2.KE939134v1 C 0 I 2391 s otoGar3.GL873534 11057545 3 + 30473821 -GTA i otoGar3.GL873534 C 0 I 2 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1373470 71 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1227755 34 - 2311269 I e canFam3.chr20 16595951 0 + 58134056 C e dasNov3.JH563077 1805441 9810 - 2187301 I e saiBol1.JH378125 27721369 0 + 27742158 C e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=65114.000000 s hg38.chrUn_KI270749v1 105007 11 + 158759 AAAAATC-AATC s panTro5.chr3 201992224 11 - 202621043 AAAAATC-AATC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760260 11 - 205426864 AAAAATC-AATC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577081 11 + 86207423 aaaaatc-aatc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060107 11 + 204787373 AAAAATC-AATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991951 11 - 192460366 AAAAATC-AATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103916 11 - 17224310 AAAAATC-AATC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416086 11 - 41321030 AAAAATT-AATC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487550 11 - 101219884 AAAAATC-AATC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873527 11 - 924385 AAAAATC-AATC i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46049768 10 - 98464013 aaaaat--aatc i calJac3.chr15 C 0 C 0 s cebCap1.NW_016107467v1 258788 10 - 4835464 AAAAAT--AATC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717692 10 + 4093027 AAAAAT--AGTC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11057550 12 + 30473821 AATAGTCTAATC i otoGar3.GL873534 I 2 C 0 s canFam3.chr20 16595951 5 + 58134056 ------C-AATC i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1373470 71 - 1467263 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e rhiBie1.NW_016820128v1 1227755 34 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1805441 9810 - 2187301 I e saiBol1.JH378125 27721369 0 + 27742158 C e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=15978.000000 s hg38.chrUn_KI270749v1 105018 3 + 158759 TTT s panTro5.chr3 201992235 1 - 202621043 T-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760271 3 - 205426864 TTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577092 3 + 86207423 ttt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060118 3 + 204787373 TTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991962 3 - 192460366 TTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103927 3 - 17224310 TTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416097 3 - 41321030 TTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487561 3 - 101219884 TTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873538 3 - 924385 TTT i manLeu1.NW_012098965v1 C 0 C 0 s rhiRox1.KN296641v1 1373541 3 - 1467263 TTT i rhiRox1.KN296641v1 I 71 C 0 s rhiBie1.NW_016820128v1 1227789 3 - 2311269 TTT i rhiBie1.NW_016820128v1 I 34 C 0 s calJac3.chr15 46049778 3 - 98464013 ttt i calJac3.chr15 C 0 C 0 s cebCap1.NW_016107467v1 258798 3 - 4835464 TTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717702 3 + 4093027 TTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11057562 3 + 30473821 TTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16595956 1 + 58134056 T-- i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610360 55 - 9149476 I e papAnu3.chr2 59548239 3327 + 187378091 I e nasLar1.chr2 57719715 3329 + 181502896 I e ponAbe2.chr3 69646384 3071 + 202140232 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1805441 9810 - 2187301 I e saiBol1.JH378125 27721369 0 + 27742158 C e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=4241.000000 s hg38.chrUn_KI270749v1 105021 1 + 158759 T s panPan2.chr3 204760274 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577095 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060121 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991965 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103930 1 - 17224310 C i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416100 1 - 41321030 C i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59551566 1 + 187378091 C i papAnu3.chr2 I 3327 C 0 s chlSab2.chr22 64487564 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873541 1 - 924385 C i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57723044 1 + 181502896 C i nasLar1.chr2 I 3329 C 0 s rhiRox1.KN296641v1 1373544 1 - 1467263 C i rhiRox1.KN296641v1 C 0 C 0 s rhiBie1.NW_016820128v1 1227792 1 - 2311269 C i rhiBie1.NW_016820128v1 C 0 C 0 s calJac3.chr15 46049781 1 - 98464013 c i calJac3.chr15 C 0 C 0 s cebCap1.NW_016107467v1 258801 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717705 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11057565 1 + 30473821 T i otoGar3.GL873534 C 0 I 2 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610360 55 - 9149476 I e ponAbe2.chr3 69646384 3071 + 202140232 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e canFam3.chr20 16595957 0 + 58134056 C e dasNov3.JH563077 1805441 9810 - 2187301 I e saiBol1.JH378125 27721369 0 + 27742158 C e colAng1.NW_012114711v1 3872757 0 + 10587913 I e panTro5.chr3 201992236 0 - 202621043 C a score=34916.000000 s hg38.chrUn_KI270749v1 105022 3 + 158759 AA--T s panTro5.chr3 201992236 1 - 202621043 ----T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760275 3 - 205426864 AA--T i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69649455 3 + 202140232 aa--t i ponAbe2.chr3 I 3071 C 0 s nomLeu3.chr21 67577096 3 + 86207423 aa--t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060122 3 + 204787373 AA--T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991966 3 - 192460366 AA--T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103931 3 - 17224310 AA--T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416101 3 - 41321030 AA--T i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59551567 3 + 187378091 AA--T i papAnu3.chr2 C 0 C 0 s chlSab2.chr22 64487565 5 - 101219884 AATTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873542 3 - 924385 AA--T i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57723045 3 + 181502896 AA--T i nasLar1.chr2 C 0 C 0 s rhiRox1.KN296641v1 1373545 3 - 1467263 AA--T i rhiRox1.KN296641v1 C 0 I 39 s rhiBie1.NW_016820128v1 1227793 3 - 2311269 AA--T i rhiBie1.NW_016820128v1 C 0 I 39 s calJac3.chr15 46049782 3 - 98464013 aa--t i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721369 3 + 27742158 aa--t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258802 3 - 4835464 AA--T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717706 3 + 4093027 GA--T i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11057568 3 + 30473821 AA--C i otoGar3.GL873534 I 2 I 2 s canFam3.chr20 16595957 1 + 58134056 ----T i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610360 55 - 9149476 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1805441 9810 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=13923.000000 s hg38.chrUn_KI270749v1 105025 1 + 158759 T s panTro5.chr3 201992237 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760278 1 - 205426864 T i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69649458 1 + 202140232 t i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21 67577099 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060125 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991969 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103934 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416104 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59551570 1 + 187378091 T i papAnu3.chr2 C 0 C 0 s chlSab2.chr22 64487570 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873545 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57723048 1 + 181502896 T i nasLar1.chr2 C 0 C 0 s calJac3.chr15 46049785 1 - 98464013 t i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721372 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258805 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717709 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16595958 1 + 58134056 T i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591304 379 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610360 55 - 9149476 I e rhiRox1.KN296641v1 1373548 39 - 1467263 I e rhiBie1.NW_016820128v1 1227796 39 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e otoGar3.GL873534 11057571 2 + 30473821 I e dasNov3.JH563077 1805441 9810 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=19110.000000 s hg38.chrUn_KI270749v1 105026 1 + 158759 T s panTro5.chr3 201992238 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760279 1 - 205426864 T i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69649459 1 + 202140232 t i ponAbe2.chr3 C 0 I 2333 s nomLeu3.chr21 67577100 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060126 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991970 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103935 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416105 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59551571 1 + 187378091 T i papAnu3.chr2 C 0 C 0 s chlSab2.chr22 64487571 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873546 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57723049 1 + 181502896 T i nasLar1.chr2 C 0 C 0 s calJac3.chr15 46049786 1 - 98464013 t i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721373 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258806 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717710 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610415 1 - 9149476 T i micMur3.chr32 I 55 C 0 s proCoq1.NW_012148064v1 591683 1 + 2414909 T i proCoq1.NW_012148064v1 I 379 C 0 s otoGar3.GL873534 11057573 1 + 30473821 T i otoGar3.GL873534 I 2 C 0 s canFam3.chr20 16595959 1 + 58134056 T i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1373548 39 - 1467263 I e rhiBie1.NW_016820128v1 1227796 39 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1805441 9810 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=11095.000000 s hg38.chrUn_KI270749v1 105027 1 + 158759 T s panTro5.chr3 201992239 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760280 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577101 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060127 1 + 204787373 T i rheMac8.chr2 C 0 I 2 s macFas5.chr2 60991971 1 - 192460366 T i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11103936 1 - 17224310 T i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17416106 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 I 2 s papAnu3.chr2 59551572 1 + 187378091 T i papAnu3.chr2 C 0 I 2415 s chlSab2.chr22 64487572 1 - 101219884 T i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 873547 1 - 924385 T i manLeu1.NW_012098965v1 C 0 I 1 s nasLar1.chr2 57723050 1 + 181502896 T i nasLar1.chr2 C 0 I 2409 s calJac3.chr15 46049787 1 - 98464013 c i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721374 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258807 1 - 4835464 C i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717711 1 + 4093027 C i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610416 1 - 9149476 T i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 591684 1 + 2414909 T i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11057574 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16595960 1 + 58134056 T i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1373548 39 - 1467263 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227796 39 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1805441 9810 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=268395.000000 s hg38.chrUn_KI270749v1 105028 24 + 158759 TTATTAAAATAGAAATTA--------------------TAAGTC s panTro5.chr3 201992240 24 - 202621043 TTATTAAAATAGAAATTA--------------------TAAGTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760281 24 - 205426864 TTATTAAAATAGAAATTA--------------------TAAGTC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577102 24 + 86207423 ttattAAAATAGAAATTA--------------------TAAGTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060130 24 + 204787373 TTATTAAAGTAGAAATTA--------------------TAAGTC i rheMac8.chr2 I 2 C 0 s macFas5.chr2 60991974 24 - 192460366 TTATTAAAGTAGAAATTA--------------------TAAGTC i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11103939 24 - 17224310 TTATTAAAGTAGAAATTA--------------------TAAGTC i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17416109 24 - 41321030 TTATTAAAGTAGAAATTA--------------------TAAGTC i cerAty1.NW_012009469v1 I 2 C 0 s chlSab2.chr22 64487574 24 - 101219884 TTATTAAAGTAGAAATTA--------------------TAAGTC i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 873549 24 - 924385 TTATTAAAGTAGAAATTA--------------------TAAGTC i manLeu1.NW_012098965v1 I 1 C 0 s calJac3.chr15 46049788 24 - 98464013 ttattaaaataGAAATTG--------------------TAAGTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721375 24 + 27742158 ttattaaaataaaatatt--------------------ttaatC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258808 24 - 4835464 TTATTAAAATAGAAATTG--------------------TAAGTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717712 24 + 4093027 TTATTAAAATAGAAATTG--------------------TAAGTC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610417 24 - 9149476 TTATTAAAATAGAAATTA--------------------TAAGTC i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 591685 24 + 2414909 TTATTAAAATAGAAATTA--------------------TAAGTC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11057575 24 + 30473821 TTATAAAAATAGAAACTG--------------------TATGTC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16595961 44 + 58134056 TTATTAAGATAGAAATTAAAATAAAGCATTATGTTCTGTAAACA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1373548 39 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227796 39 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1805441 9810 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=136925.000000 s hg38.chrUn_KI270749v1 105052 10 + 158759 AAAAGTAGTG s panTro5.chr3 201992264 10 - 202621043 AAAAGTAGTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760305 10 - 205426864 AAAAGTAGTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577126 10 + 86207423 AAAAGTAGTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060154 10 + 204787373 AAAAGTGGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60991998 10 - 192460366 AAAAGTGGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103963 10 - 17224310 AAAAGTGGTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416133 10 - 41321030 AAAAGTGGTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487598 10 - 101219884 AAAAGTGGTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873573 10 - 924385 AAAAGTGGTG i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46049812 10 - 98464013 AGAAGTGGTG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721399 10 + 27742158 AGAAGTGGCG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258832 10 - 4835464 AAAAGTGGCG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717736 10 + 4093027 AAAAGTGGTG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610441 10 - 9149476 AAAAGTGGTG i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 591709 10 + 2414909 AAAAGTAATG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11057599 10 + 30473821 AAAAGTGGTG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596005 10 + 58134056 AAAAGTAGTG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1815251 10 - 2187301 aaaaGAGGTG i dasNov3.JH563077 I 9810 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1373548 39 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227796 39 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=99633.000000 s hg38.chrUn_KI270749v1 105062 6 + 158759 ATGGAC s panTro5.chr3 201992274 6 - 202621043 ATGGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760315 6 - 205426864 ATGGAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577136 6 + 86207423 ATGGAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060164 6 + 204787373 ATGGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992008 6 - 192460366 ATGGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103973 6 - 17224310 ATGGAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416143 6 - 41321030 ATGGAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487608 6 - 101219884 ATGGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873583 6 - 924385 ATGGAT i manLeu1.NW_012098965v1 C 0 C 0 s rhiRox1.KN296641v1 1373587 6 - 1467263 ATGGAT i rhiRox1.KN296641v1 I 39 I 122 s rhiBie1.NW_016820128v1 1227835 6 - 2311269 ATGGAT i rhiBie1.NW_016820128v1 I 39 I 122 s calJac3.chr15 46049822 6 - 98464013 ATGGAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721409 6 + 27742158 ATGGAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258842 6 - 4835464 ATGGAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717746 6 + 4093027 ATGGAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610451 6 - 9149476 ATGGAT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 591719 6 + 2414909 ATGGAT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11057609 6 + 30473821 ATGGAT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596015 4 + 58134056 --GAAA i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1815261 6 - 2187301 GTGGGT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=189895.000000 s hg38.chrUn_KI270749v1 105068 17 + 158759 ---ACATTATTTAGCAGAAA s panTro5.chr3 201992280 17 - 202621043 ---ACATTATTTAGCAGAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760321 17 - 205426864 ---ACATTATTTAGCAGAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577142 17 + 86207423 ---ACATTATTTAGCAGAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060170 17 + 204787373 ---ACATTATTTAGCAGAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992014 17 - 192460366 ---ACATTATTTAGCAGAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103979 17 - 17224310 ---ACATTATTTAGCAGAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416149 17 - 41321030 ---ACATTATTTAGCAGAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487614 17 - 101219884 ---ACATTATTTAGCAGAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873589 17 - 924385 ---ACATTATTTAGCTGAAA i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46049828 17 - 98464013 ---AAATTACTTAGCAGAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721415 17 + 27742158 ---AAATCACTTAGCAGAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258848 17 - 4835464 ---AAATTACTTAGCAGAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717752 17 + 4093027 ---AAATTACTTAGCAGAAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610457 17 - 9149476 ---AAATCATTGAGAAGAAA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 591725 17 + 2414909 ---AAATCATTTAGAAGAAA i proCoq1.NW_012148064v1 C 0 I 225 s otoGar3.GL873534 11057615 17 + 30473821 ---AAATCAGTTCGTAGAAA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596021 17 + 58134056 ---AAATTATTTATCAGAAA i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1815267 20 - 2187301 ACTAAATCACTTAACAGAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1373593 122 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227841 122 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=710813.000000 s hg38.chrUn_KI270749v1 105085 74 + 158759 ATTCTTCAGAGACCACAGG--AAAATCCAGG---------TTGTTGGAGGGTTAATGTTGAGAAGTAAGAAAGGACAGAACAG-TG s panTro5.chr3 201992297 74 - 202621043 ATTCTTCAGAGACCACAGG--AAAATCCAGG---------TTGTTGGAGGGTTAATGTTGAGAAGTAAGAAAGGACAGAGCAG-TG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760338 74 - 205426864 ATTCTTCAGAGACCACAGG--AAAATCCAGG---------TTGTTGGAGGGTTAATGTTGAGAAGTAAGAAAGGACGGAGCAG-TG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577159 74 + 86207423 ATCCTTCAGAGACCACAGG--AAAATACAGG---------TTGCTGGAGGGTTAATGTTGAGAAGTAAGAAAGGAGGGAGCAG-TG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060187 74 + 204787373 ATCCTTCAGAGACCACAGG--AAAATCCAGG---------TTGTTGGAGGCTTACTGCTGAGAAGTAAGAAAGGAGGGAGCAG-TG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992031 74 - 192460366 ATCCTTCAGAGACCACAGG--AAAATCCAGG---------TTGTTGGAGGCTTACTGCTGAGAAGTAAGAAAGGAGGGAGCAG-TG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11103996 74 - 17224310 ATCCTTCAGAGACCACAGG--AAAATCCAGG---------TTGTTGGAGGCTTACTGCTGAGAAGTAAGAAAGAAGGGAGCAG-TG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416166 74 - 41321030 ATCCTTCAGAGACCACAGG--AAAATCCAGG---------TTGTTGGAGGCTTAATGCTGAGAAGTAAGAAAGGAGGGAGCAG-TG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487631 74 - 101219884 ATCCTTCAGAGACCACAGG--AAAATCCAGG---------TTGTTGGAGGCTTAATGCTGAGAAGTAAGAAAGGAGGGAGCAG-TG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873606 74 - 924385 ATCCTTCAGAGACCACAGG--AAAATCCAGG---------TTGTTGGAGGCTTAATGCTGAGAAGTAAGAAAGGAGGGAGCAG-TG i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46049845 74 - 98464013 ATCCTTCAGAGACCACAAG--AAAATCCAAG---------TTATTGGATGGTTAAGGATGAAAAGTAAGAAAGGAGCAATCAG-TG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721432 74 + 27742158 ATCCTTCAGAGACCACAAG--AAAATCCAAG---------TTATTGGATGATTAAGGATGAAAAGTAAGAAAGGAGCAATCAG-TG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258865 74 - 4835464 ATCCTTCAGAGACCACAAG--AAAATCCAAG---------TTATTGGATGATTAAGGATGAAAAGTAAGAAAGGAGCAATCAG-TG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717769 74 + 4093027 ATCCTTCAGAGACCACAAG--AAAATCCAAG---------TTATTGGATGGTTAAGGATGAAAAGTAAGAAAAGAGCAATCAG-TG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610474 74 - 9149476 ACTCTTAGAAGACCACAAG--AAAAACCAAG---------TTGTTTCAGGGTCAAAGTTGAGAAGCAGAAAAGGAGAGAGCAG-TG i micMur3.chr32 C 0 I 237 s otoGar3.GL873534 11057632 76 + 30473821 ACCCTTAAAAGACAATAGGAAAAAAACAAAG---------CTGTTTGAGGGTTAAAGTTCAGACACAAGAAAGGAGAGAGCAG-TG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596038 75 + 58134056 GACCCGAAGAGACCACGAG--ACAATTCAAG---------TTCTTTGAGGGATAAGGTTGAAAAGAAAAACATGAAAAATGAGATG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1815287 83 - 2187301 AACCTTGAGAAGCAACAAA--AAAATCCAAGTTTATTTTATTATTTGAGGGGCAAGGCTGAGAAGAGGAAGAGAAGATAGTAG-TG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591742 225 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1373593 122 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227841 122 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=157307.000000 s hg38.chrUn_KI270749v1 105159 22 + 158759 --AAT-ACAT-CAATTTAACCGTAGG s panTro5.chr3 201992371 22 - 202621043 --AAT-ACAT-CAATTTAACCATAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760412 22 - 205426864 --AAT-ACAT-CAATTTAACCATAGG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577233 22 + 86207423 --AGC-ACAT-CAATTTAACCATAGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060261 22 + 204787373 --AGT-ACAT-CAATTTAACCACAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992105 22 - 192460366 --AGT-ACAT-CAATTTAACCACAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104070 22 - 17224310 --AGT-ACAT-CAATTTAACCACAGG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416240 22 - 41321030 --AGT-ACAT-CAATTTAACTGTAGG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487705 22 - 101219884 --AGT-ACAT-CAATGTAACCGAAGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873680 22 - 924385 --AGT-ACAT-CAATTTAACTGTAGG i manLeu1.NW_012098965v1 C 0 I 1 s calJac3.chr15 46049919 22 - 98464013 --AGT-ACAT-CAGTTTAACCATAGG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721506 22 + 27742158 --AAT-ATGT-CAGTTTAACCATAGG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258939 22 - 4835464 --AGT-ATGT-CAGTTTAACCATAGG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717843 22 + 4093027 --AGT-ATGT-CAGTTTAACCATAGG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11057708 23 + 30473821 --TGT-ACCTGTAATAGAACTCTAGT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596113 22 + 58134056 --AGT-ACTT-TAATAGACCCTTAGG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1815370 24 - 2187301 AGAGTAATTT-TAAAAGAACCACAG- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591742 225 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610548 237 - 9149476 I e rhiRox1.KN296641v1 1373593 122 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227841 122 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=13410.000000 s hg38.chrUn_KI270749v1 105181 2 + 158759 AA s panTro5.chr3 201992393 2 - 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760434 1 - 205426864 -A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577255 1 + 86207423 -A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060283 2 + 204787373 AA i rheMac8.chr2 C 0 I 4 s macFas5.chr2 60992127 2 - 192460366 AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104092 2 - 17224310 AA i macNem1.NW_012018021v1 C 0 I 4 s cerAty1.NW_012009469v1 17416262 2 - 41321030 AA i cerAty1.NW_012009469v1 C 0 I 2 s chlSab2.chr22 64487727 2 - 101219884 AA i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 873703 2 - 924385 AA i manLeu1.NW_012098965v1 I 1 I 1 s rhiRox1.KN296641v1 1373715 2 - 1467263 AA i rhiRox1.KN296641v1 I 122 C 0 s rhiBie1.NW_016820128v1 1227963 2 - 2311269 AA i rhiBie1.NW_016820128v1 I 122 C 0 s calJac3.chr15 46049941 2 - 98464013 GA i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27721528 2 + 27742158 GG i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 258961 2 - 4835464 GG i cebCap1.NW_016107467v1 C 0 I 2 s aotNan1.NW_018502033v1 3717865 2 + 4093027 GG i aotNan1.NW_018502033v1 C 0 I 4 s otoGar3.GL873534 11057731 2 + 30473821 AA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596135 2 + 58134056 AA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1815394 1 - 2187301 -A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591742 225 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610548 237 - 9149476 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=9090.000000 s hg38.chrUn_KI270749v1 105183 1 + 158759 A s panTro5.chr3 201992395 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760435 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577256 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s cerAty1.NW_012009469v1 17416266 1 - 41321030 A i cerAty1.NW_012009469v1 I 2 C 0 s chlSab2.chr22 64487730 1 - 101219884 A i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 873706 1 - 924385 A i manLeu1.NW_012098965v1 I 1 C 0 s rhiRox1.KN296641v1 1373717 1 - 1467263 A i rhiRox1.KN296641v1 C 0 I 849 s rhiBie1.NW_016820128v1 1227965 1 - 2311269 A i rhiBie1.NW_016820128v1 C 0 I 848 s calJac3.chr15 46049944 1 - 98464013 A i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27721531 1 + 27742158 G i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 258965 1 - 4835464 A i cebCap1.NW_016107467v1 I 2 C 0 s aotNan1.NW_018502033v1 3717871 1 + 4093027 A i aotNan1.NW_018502033v1 I 4 C 0 s otoGar3.GL873534 11057733 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596137 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1815395 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591742 225 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610548 237 - 9149476 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e macNem1.NW_012018021v1 11104094 4 - 17224310 I e rheMac8.chr2 66060285 4 + 204787373 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I e macFas5.chr2 60992129 0 - 192460366 C a score=83871.000000 s hg38.chrUn_KI270749v1 105184 18 + 158759 AAAAATGTTTACTGCTGA s panTro5.chr3 201992396 18 - 202621043 AAAAATGTTTACTGCTGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760436 18 - 205426864 AAAAATGTTTACTGCTGA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577257 18 + 86207423 AAAAATGTTTACTGCTGA i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60992129 4 - 192460366 -----TGGT--------- i macFas5.chr2 C 0 C 0 s cerAty1.NW_012009469v1 17416267 18 - 41321030 AAAAATGTTTACTACTGA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487731 18 - 101219884 AAAAATGTTTACTGCTGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873707 18 - 924385 AAAAATGTTTACTACTGA i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46049945 18 - 98464013 AAAAATGTTTACTGCCGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721532 18 + 27742158 AAAAATGTTTACTGCCGA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258966 18 - 4835464 AAAAATGTTTACTGCTGA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717872 18 + 4093027 AAAAATGTTTACTACCAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11057734 14 + 30473821 ----ATGCATTTTGGTAA i otoGar3.GL873534 C 0 I 4 s canFam3.chr20 16596138 15 + 58134056 ---CACATTTACTGGTAA i canFam3.chr20 C 0 I 4 s dasNov3.JH563077 1815396 18 - 2187301 AAAATTGCTTGCTCATAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591742 225 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610548 237 - 9149476 I e rhiRox1.KN296641v1 1373718 849 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227966 848 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e macNem1.NW_012018021v1 11104094 4 - 17224310 I e rheMac8.chr2 66060285 4 + 204787373 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=926183.000000 s hg38.chrUn_KI270749v1 105202 120 + 158759 -----TGAATTAACTTGGAGGCCCTCTATCTAGAAGAGGGGC------ATTTT-----------------------------------TTCCTTGCCTAATAAAAGGGAGTTTATAAAACTTATAGCATCATTGTAATTGAGAA----ATG----TATTTTGAAAAATGGAACA s panTro5.chr3 201992414 120 - 202621043 -----TGAATTAACTTGGAGGCCCTCTATCTAGAAGAGGGGC------ATTTT-----------------------------------TTCCTTGCCTAATAAAAGGGAGTTTATAAAACTTATAGCATCATTGTAATTGAGAA----ATG----TATTTTGAAAAATGGAACA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760454 120 - 205426864 -----TGAATTAACTTGGAGGCCCTCTATCTAGAAGAGGGGC------ATTTT-----------------------------------TTCCTTGCCTAATAAAAGGGAGTTTATAAAACTTATAGCATCATTGTAATTGAGAA----ATG----TATTTTGAAAAATGGAACA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577275 120 + 86207423 -----TGAATTAACTTGGAGGCCCTCTATCTAGAAGATAGGC------ATTTT-----------------------------------TTCCTTGCCTAATAAAAGGGAGTTTATAAAACTGATGGCATCATTGTAATTGAGAA----ATG----TATTTTGAAAAATGGAACA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060289 120 + 204787373 -----TGAATTAACTTGGAGGCCCTTTATCTAGAAGAGAGGT------GTTTT-----------------------------------TTCCTTGCTTAATAAAAGGAAGTTTATAAAACTTACAGCATCATTGTAATTGAGAA----ATT----TATTTTGAAAAATGCATCA i rheMac8.chr2 I 4 C 0 s macFas5.chr2 60992133 120 - 192460366 -----TGAATTAACTTGGAGGCCCTTTATCTAGAAGAGAGGT------GTTTT-----------------------------------TTCCTTGCTTAATAAAAGGAAGTTTATAAAACTTACAGCATCATTGTAATTGAGAA----ATT----TATTTTGAAAAATGCATCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104098 120 - 17224310 -----TGAATTAACTTGGAGGCCCTTTATCTAGAAGAGAGGT------GTTTT-----------------------------------TTCCTTGCTTAATAAAAGGAAGTTTATAAAACTTACAGCATCATTGTAATTGAGAA----ATG----TATTTCGAAAAATGCATCA i macNem1.NW_012018021v1 I 4 C 0 s cerAty1.NW_012009469v1 17416285 120 - 41321030 -----TGAATTAACTTGGAGGCCCTTTATCTAGAAGAGAGGC------CTTTT-----------------------------------TTCCTTGCTTAGTAAAAGGAAGTTTATAAAACTTACAGCATCATTGTAATTGAGAA----ACG----TATTTTGAAAAATGCATCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487749 120 - 101219884 -----TGAATTAACTTGGAGGCCCTTTATCTAGAAGAGAGGC------GTTTT-----------------------------------TTCCTTGCTTAATAAAAGGAAGTTTATAAAACTTACAGCATCATTGTAATTGAGAA----ATG----TATTTTGAAAAATGCATCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873725 120 - 924385 -----TGAATTAACTTGGAGGCCCTTTATCTAGAAGAGAGGC------CTTTT-----------------------------------TTCCTTGCTTAATAAAAGGAAGTTTATAAAACTTACAGCATCATTGTAATTGAGAA----ATG----TATTTTGAAAAATGCATCA i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46049963 122 - 98464013 -----TGAATTAACTTGGAAACCCTCTGTCAAGAAGAGAGGG----TTTATGT-----------------------------------TTCCTTGCCTAATAAAAGGAAGTTTATAGAACTTATAGCACCACTGTAATTAAGAA----GAG----TATTTTGAAAAATGCATCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721550 124 + 27742158 -----TGAATTAACTTAGAAACCCTCTATCAAGAAGAGAGGG--TTTTTTTTT-----------------------------------TTCCTTGCTTAATCAAAGGAAGTTTACAGAACTTATAGCACCACTGTAATTAAGAA----GAG----TATTTTGAAAAATGCATCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 258984 126 - 4835464 -----TGAATTAACTTAGAAACCTTCTATCAAGAAGAGAGGGTTTTTTTTTTT-----------------------------------TTCCTTGCCTAATCAAAGGAAGTTTACAGAACTTATAGCACCACTGTAATTAAGAA----GAG----TATTTTGAAAACTGCATCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3717890 123 + 4093027 -----TGAATTAACTTGGAAACCCTCTACCAAGAAGAGAGGG---TTTTTTTT-----------------------------------TTCCTTGCCTAATAAAAGGAAGTTTATAGAACTTATAGCACCACTGTAATTAAGAA----GAG----TATTTTGAAAAATGCATCA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11057752 83 + 30473821 -----TGAGTTAATCTGGAGGACCTTGACCCAGAAGAGAGGG------GCTT----------------------------------------TTGTTTCCTAAGGGCAAG------GAACTTATGGCACCACTGCAGTCA---------------------------------- i otoGar3.GL873534 I 4 C 0 s canFam3.chr20 16596157 159 + 58134056 -----TAAGTAAAAAATGAGATTCTCTACCTTAAGTAAAAGA------ATTTTAAACTAATATTACAGTGTATGTTAACTAGaatttaattttttttaaaaaaaGGAGACTTTATAGAACTTCTGGTACCACTGTAGTTAAAAAAAGTAAG----TATTCTAAAATATATATCT i canFam3.chr20 I 4 C 0 s dasNov3.JH563077 1815414 126 - 2187301 TAGGAGAGTTTAACTAGGAAGTCCTCCACCTAGAAGAGAGGC------TTTTT-----------------------------------TTC---AACTAAAGAAAACAAGTTTATAAAATTCATTGCACCACTCTAGTTAAGAA----AAGAAATTATTCTGAAATATACACTA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 591742 225 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610548 237 - 9149476 I e rhiRox1.KN296641v1 1373718 849 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227966 848 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=47309.000000 s hg38.chrUn_KI270749v1 105322 4 + 158759 GAAT s panTro5.chr3 201992534 4 - 202621043 GAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760574 4 - 205426864 GAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577395 4 + 86207423 GAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060409 4 + 204787373 GAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992253 4 - 192460366 GAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104218 4 - 17224310 GAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416405 4 - 41321030 GAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487869 4 - 101219884 GAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873845 4 - 924385 GAAT i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46050085 4 - 98464013 AAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721674 4 + 27742158 GAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 259110 4 - 4835464 GAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718013 4 + 4093027 GAAT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 591967 4 + 2414909 GAAT i proCoq1.NW_012148064v1 I 225 C 0 s otoGar3.GL873534 11057835 4 + 30473821 GAAT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596316 4 + 58134056 GAGT i canFam3.chr20 C 0 I 274 s dasNov3.JH563077 1815540 4 - 2187301 AAAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610548 237 - 9149476 I e rhiRox1.KN296641v1 1373718 849 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227966 848 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=683829.000000 s hg38.chrUn_KI270749v1 105326 75 + 158759 AATAGGTTTTTCATAGATTAAAATAAACCA-CAGTGTTTAAATATTACATGTATTTATGTAGTTTTAAAGACATGG s panTro5.chr3 201992538 75 - 202621043 AATAGGTTTTTCATAGATTAGAATAAACCA-CAGTGTTTAAATATTACATGTGTTTATGTAGTTTTAAAGACATGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760578 75 - 205426864 AATAGGTTTTTCATAGATTAGAATAAACCA-CAGTGTTTAAATATTACATGTGTTTATGTAGTTTTAAAGACATGG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577399 75 + 86207423 AATAGGTTTTTCATAGATTAGAATAAACCA-CAGTGTTTAAATATTACATGTGTTTATGTAGTTTTAAAGACATGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060413 75 + 204787373 AATAGGTTTTTCTTAGATGAAACTAAACCA-CAGTGTTTAAATATTACATGTGTTTATGTAGTTTTAAAGTCATGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992257 75 - 192460366 AATAGGTTTTTCTTAGATGAAACTAAACCA-CAGTGTTTAAATATTACATGTGTTTATGTAGTTTTAAAGTCATGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104222 75 - 17224310 AATAGGTTTTTCTTAGATGAAACTAAACCA-CAGTGTTTAAATATTACATGTGTTTATGTAGTTTTAAAGTCATGG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416409 75 - 41321030 AATAGGTTTTCCTTAGATGAGACTAAACCA-CAGTGTTTAAATATTACATGTGTTTATGTAGTTTTAAAGTCATGG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487873 75 - 101219884 AATAGGTTTTTCTTAGATGAGACTAAACCA-CAGTGTTTAAATATTACATGTGTTTATGTAGTTTTAAAGTCATGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873849 75 - 924385 AATAGGTTTTTCTTAGATGAGACTAAACCA-CAGTGTTTAAATATTACATGTGTTTATGTAGTTTTAAAGTCATGG i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46050089 75 - 98464013 AATAGGCTTTTCAAAAATTAGAATAAACCA-CAATGTTTAAATATTACATGTGTTTGTATAGTTTCAAAGACCTTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721678 75 + 27742158 AACAGGCTTTTCAAAGATTAGAATAAACCA-CAATGTTTAAATATTACATATGTTTATATAGTTTCAAAGACATTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 259114 75 - 4835464 AACAGGCTTTTCAAAGATTAGAATAAACCA-CAATGTTTAAATATTACATATGTTTCTATAGTTTCAAAGACATTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718017 75 + 4093027 AATAGGCTTTTCAAAGATTAGAATAAACCA-CAATGTTGAAATATTACATGTGTTTATATAGTTTCAAAGACATTC i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 591971 76 + 2414909 AACAGGTTTGTCACAGATTAAAATACACTACCAGTGTTTGAATATTACGTGTGTTTATGTAGTGTCAAAGACATGA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11057839 76 + 30473821 AATAGGTTTGTCATAGATGAAAGTAAACCACCAGTGTTTGAATATTACACGTGTCTTTGCTGTGTCAAGGAAATGG i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1815544 73 - 2187301 GATTTGTTTTCTATGGATTAAATGATATCACCAATGTTTGAATATTACAGGTGTCTGTGAGGTTTCAAAGGCA--- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610548 237 - 9149476 I e rhiRox1.KN296641v1 1373718 849 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227966 848 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e canFam3.chr20 16596320 274 + 58134056 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=1401091.000000 s hg38.chrUn_KI270749v1 105401 129 + 158759 AAAAAGTGCATAGCAAAATTAAAGTTGACATAGAAACTATACTTTACAGATCAAACTTAGACCAACTAGAATAGAAG-GGCAAGGAGAGTCTGCAATGAGTTGATTAGCTCTGCTGCAGGAAATTGACCA s panTro5.chr3 201992613 129 - 202621043 AAAAAGTGCATAGCAAAATTAAAGTTGACATAGAAACTATACTTTACAGATCAAACTTAGACCAACTAGAATAGAAA-GGCAAGGAGAGTCTGCAATGAGTTGATTAGCTCTACTGCAGGAAATTGACCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760653 129 - 205426864 AAAAAGTGCATAGCAAAATTAAAGTTGACATAGAAACTATACTTTACAGATCAAACTTAGACCAACTAGAATAGAAA-GGCAAGGAGAGTCTGCAATGAGTTGATTAGCTCTGCTGCAGGAAATTGACCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577474 129 + 86207423 AAAAAGTGCACAGCAAAATTAAAGTTGACATAGAAACGATACTTAACAGATCAAACTTAGACCAACTAGAATAGAAA-GGCAAGGAGAGTCTGCAATGAGTTGATTAGCTCTGCTGCAGGAAATTGACCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060488 129 + 204787373 AAAAAGTGCAGAGCAAAATTAAAGTTGACATAGAAACTGTACTTTACAGATCAAACTTAGACCAACTAGAACAGAAA-GGCAAGGAGAGTCTGCAATGAGTTGATTAGCTCTGCTGCAGGAAACTGACCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992332 129 - 192460366 AAAAAGTGCAGAGCAAAATTAAAGTTGACATAGAAACTATACTTTACAGATCAAACTTAGACCAACTAGAACAGAAA-GGCAAGGAGAGTCTGCAATGAGTTGATTAGCTCTGCTGCAGGAAACTGACCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104297 129 - 17224310 AAAAAGTGCACAGCAAAATTAAAGTTGACATAGAAACTATACTTTACAGATCAAACTTAGACCAACTAGAACAGAAA-GGCAAGGAGAGTCTGCAATGAGTTGATTAGCTCTGCTGCAGGAAACTGACCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416484 129 - 41321030 AAAAAGTGCATAGCAAAATTAAAGTTGACATAGAAACTATACTTTACAGATCAAACTTAGACCAACTAGAACAGAAA-GGCAAGGAGAGTCTGCAATGAGTTGATTAGCTCTGCTGCAGGAAACTGACCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64487948 129 - 101219884 AAAAAGTGCATAGCAAAATTAAAGTTGACATAGAAACTATACTTTACAGATCAAACTTAGACCAACTAGAACAGAAA-GGCAAGGAGAGTCTGCAATGAGTTGATTAGCTCTGCTGCAGGAAACTGACCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 873924 129 - 924385 AAAAAGTGCATAGCAAAATTAAAGTTGACATAGAAACTATACTTTACAGATCAAACTTAGACCAACTAGAACAGAAA-GGCAAGGAGAGTCTGCAATGAGTTGATTAGCTCTGCTGCAGGAAACTGACCA i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46050164 129 - 98464013 AAAAAGAGCATAGGAAAATTAAAATTGACATAGAAAGTACACTTTACAGATCAAACTTAGACCTACTACAATAGAAA-GGCAAGGAGAGCCTGCAGTTAGTTGATTAGCTCTGCTATAGGAAATTGATCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721753 129 + 27742158 AAAAAGACCATAGTAGAATTAAAGTTGACGTAGAAAGTACACTTTACAGAACAAACTTAGACCTACTAGAATAGAAA-GGCAAGGAGAGTCTGCAATTAGTTGATTAGCTCTGCTACAGGAAATTAATCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 259189 129 - 4835464 AGAAAGAGCATAGCAAAATTAAAGTTGACATAGAAAGTACACTTTACAGATCAAACTTAGACCTACTAGAATAGAAA-GGCAAGGAGAGTCTGCAATTAGTTGATTAGCTCTGCTACAGGAAATTGATCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718092 129 + 4093027 AAAAAGAGCATAGGAAAATTAAAGTTGACATAGAAAGTACACTTTACAGATCAAACTTAGACCTACTAGAATAGAAA-GGCAAGGAGAGTTTGCAATTAGTTGATTAGCTCTGCTACAGGAAATTGATAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610785 129 - 9149476 AAAAAGTGCATGACAAAATTATAGTTGATATAGAAACGATGTTTTGCAGATCAAACTCAGATCAACTAGAAAGAGAA-GCCAAGCAGAGTCTGGAATGAGTCTGTCAGCTCTGCTGCAAGAAATAGACCA i micMur3.chr32 I 237 C 0 s proCoq1.NW_012148064v1 592047 129 + 2414909 AAAAAGTGCATGGCAAAATCATAGTTGATATAGAAACTATGCTTTGCAGATCAAACTCAGATCAACTAGAAAGGGAA-GCCAAGGAGCCTCTGGAATGAGTCCATCAGCTCTGCTGCAAGAAATTGACCA i proCoq1.NW_012148064v1 C 0 I 628 s otoGar3.GL873534 11057915 130 + 30473821 GAAACGTGTGGGGCAAAATGATAGCAGATGTAGAAACGACGCTTTTTAGACTAAACTCAGACCAACTAGAAAGGGAAGGCCAGGGACAGTCTAGAATGAGCTGATCAGCTTCACTGTGGAAAATTAACCC i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1815617 117 - 2187301 ------------GTAAAATTATAGTTGATGTGGTAACTCTGCTTTAAAAATCAAACATTGGCCAATTAGAAAAGGAA-ACCAAAGAGAATTTTCAATTAGTCTATTTACTCTCCTAGAAGATATCAACCA i dasNov3.JH563077 C 0 I 2 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1373718 849 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227966 848 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e canFam3.chr20 16596320 274 + 58134056 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=329471.000000 s hg38.chrUn_KI270749v1 105530 41 + 158759 ACTGCAAGTGAACTACTGGG-GGGATCGACGTTTTATGTGGA s panTro5.chr3 201992742 41 - 202621043 ACTGCAAGTGAACTACTGGG-GGGATCGACGTTTTATGTGGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760782 41 - 205426864 ACTGCAATTGAACTACTGGG-GGGATTGACGTTTTATGTGGA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577603 41 + 86207423 ACTGCAAGTGAACTACTGGG-GGGATCGACGTTTTATGTGGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060617 41 + 204787373 ACTGCAAGTGAACTACTGGG-GGGATAGATGTTTTATGTAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992461 41 - 192460366 ACTGCAAGTGAACTACTGGG-GGGATAGATGTTTTATGTAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104426 41 - 17224310 ACTGCAAGTGAACTACTGGG-GGGATAGATGTTTTATGTAGA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416613 41 - 41321030 ACTGCAAGTGAACTACTAGG-GGGATAGATGTTTTATGTAGA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488077 41 - 101219884 ACTGCAAGTGAACTACTGGG-GGGATCAACGTTTTATGTAGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874053 41 - 924385 ACTGCAAGTGAACTACTGGG-GGGATAGACGTTTTATGTAGA i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46050293 42 - 98464013 ACTGCATGTGAACTGCTGGTCAGGATCAACGTTTTATGTGAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721882 41 + 27742158 ACTGCATGTGAA-TACTGGTCAGGATCAATGTTTTATGTGAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 259318 42 - 4835464 ACTGCATGTGAACTACTGGTCAGGATCAACGTTTTATGTGAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718221 42 + 4093027 ACTGCATGTGAACTACTGGTCAGGATCAATGTTTTATGTGAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610914 39 - 9149476 GTTGGACATGAACTGCTGGT---GATCAAAGATTTATGTGGA i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11058045 39 + 30473821 GATGGATGAGAACTGCTGGT---GGTCACAGTTTCATGTGGG i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1815736 39 - 2187301 AGTGGATGTGAACTACTGAG---GATCAAAGCTTTATGAAga i dasNov3.JH563077 I 2 I 573 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1373718 849 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227966 848 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e canFam3.chr20 16596320 274 + 58134056 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=42795.000000 s hg38.chrUn_KI270749v1 105571 4 + 158759 TCTT s panTro5.chr3 201992783 4 - 202621043 TCTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760823 4 - 205426864 TCTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577644 4 + 86207423 TCTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060658 4 + 204787373 TCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992502 4 - 192460366 TCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104467 4 - 17224310 TCTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416654 4 - 41321030 TCTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488118 4 - 101219884 TCTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874094 4 - 924385 TCTT i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46050335 4 - 98464013 TCTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721923 4 + 27742158 TCTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 259360 4 - 4835464 TCTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718263 4 + 4093027 TCTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610953 4 - 9149476 TCTT i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11058084 4 + 30473821 TTTT i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1373718 849 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227966 848 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e canFam3.chr20 16596320 274 + 58134056 I e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=331577.000000 s hg38.chrUn_KI270749v1 105575 32 + 158759 TGTGAAGCACAAAACAAGATCAGCAAATCATa s panTro5.chr3 201992787 32 - 202621043 TGTGAAGCACAAAACAAGATCAGCAAATCATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760827 32 - 205426864 TGTGAAGCACAAAACAAGATCAGCAAATCATA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577648 32 + 86207423 TGTGAAGCACAAAACAAGATCAGCAAATCATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060662 32 + 204787373 TGTGAAGCACAAAACAAGATCAGCAAATCATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992506 32 - 192460366 TGTGAAGCACAAAACAAGATCAGCAAATCATa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104471 32 - 17224310 TGTGAAGCACAAAACAAGATCAGCAAATCATa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416658 32 - 41321030 TGTGAAGCACAAAACAAGATCAGCAAATTGTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488122 32 - 101219884 TGTGAAGCACAAAACAAGATCAGCAAATCATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874098 32 - 924385 TGTGAAGCACAAAACAAGATCAGCAAATCATa i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46050339 30 - 98464013 TGTGAAGCACAAAACAAAATCAGTAAATCA-- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721927 32 + 27742158 TGTGCAGCACAAAACAAAATCAGTAAATCATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 259364 32 - 4835464 TGCGAAGCACAAAACAAAATCAGTAAATCATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718267 32 + 4093027 TGTGAAGCACAAAACAAAATCAGTAAATCATA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1610957 32 - 9149476 TGTGAACCACAAAACAGGATCAGTGAATCATA i micMur3.chr32 C 0 I 484 s otoGar3.GL873534 11058088 32 + 30473821 CATGAAGCACAAATCAGAATCGGGTTATCCTC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596594 32 + 58134056 TATGAAGCACAAAACACAATCAGTGAATCATA i canFam3.chr20 I 274 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1373718 849 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227966 848 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=54368.000000 s hg38.chrUn_KI270749v1 105607 11 + 158759 aagaaacaaat s panTro5.chr3 201992819 11 - 202621043 AAGAAACAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760859 11 - 205426864 AAGAAACAAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577680 11 + 86207423 AAGAAACAAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060694 11 + 204787373 AAGAAACAACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992538 11 - 192460366 aagaaacaact i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104503 11 - 17224310 aagaaacaact i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416690 11 - 41321030 AAGAAACAACT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488154 11 - 101219884 AAGAAACAACT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874130 11 - 924385 aagaaacaact i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46050369 8 - 98464013 ---GAAACAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721959 11 + 27742158 CAGAAAGAAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 259396 11 - 4835464 CAGAAACAAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718299 11 + 4093027 CAGAAACAAAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11058120 11 + 30473821 TAGGAGTCAGC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596626 11 + 58134056 ATGAACCAGGC i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610989 484 - 9149476 I e rhiRox1.KN296641v1 1373718 849 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227966 848 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=2804811.000000 s hg38.chrUn_KI270749v1 105618 345 + 158759 aatgaaagctgacttagttggttcaggctgctataacacatt-------actgggtggcttaaacaacagaaatgtatttcttacagttctggaggctgaaagtctgaaagcagggtgtcagcctggttaggttctgatgatcaccttcttccatggcttcctcacatggtggaaaaagataaagaggaagcacactctatcctgtgtcttcttat-aagggcactaataccactaatgagtgctccactctcatgacctaattacctgtaaagga-tct--acctccaaatgacatcacattgggaatcaggctttaacatataaatgttgggggcatacaagcattcagttcat s panTro5.chr3 201992830 345 - 202621043 AATGAAAGCtgacttagttggttcaggctgctataacaaatt-------actgggtggcttaaacaacagaaacgtatttcttacagttctggaggctgaaattctgaaagcagggtgtcagcatgcttaggttctgatgaacaccttcttccatggcttcctcacatggtggaaaaagataaagaggaagcacactctatcctgtgtcttcttat-aagggcactaataccactaatgagtgctccactctcatgacctaattacctgtaaagga-tct--acctccaaatgccatcacattgggaatcaggctttaacatataaatgttgggggcatacaagcattcagttcat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204760870 345 - 205426864 AATGAAAGCtgacttagttggttcaggctgctataacgaatt-------actgggtggcttaaacaacagaaatgtatttcttacagttctggaggctgaaattctgaaagcagggtgtcagcatggttaggttctgatgaacaccttcttccatggcttcctcacatggtggaaaaagataaagaggaagcacactctatcctgtgtcttcttat-aagggcactaataccactaatgagtgctccactctcatgacctaattacctgtaaagga-tct--acctccaaatgccatcacattgggaatcaggctttaacatataaatgttgggggcatacaagcattcagttcat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67577691 345 + 86207423 AATGAAAGCtgacttagttggttcaggctgctataacaaatt-------actgggtggcttaaacaacagaaatgtatttcttaaagttctggaggctgaaattctgaaagcagggtgtcagcatggttaggttctgatgatcaccttcttccatggcttcctcagatggtggaaaaagataaagaggaagcaaactctatcctgtgtcttcttat-aagatcactaataccactaatgagtgctccactttcatgacctaattacctgcaaagga-tct--acttccaaatgccatcgcattgggaattaggctttaacatataaatgttgggggcatacaagcattcagttcat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66060705 345 + 204787373 AATGAAAGCtgacttagttggttcaggctgctataacaaatt-------actgggtggcttaaacaacagaaacgtatttcttacagttctggaggctgaaattctgaaagcagggtgtcagcatggttaggttttgatgatcaacttcttccacggctccctcacatggtggaaaaagagaaagaggaagcaaactctatcctgtgtcttcttat-aagggcactaataccattaatgagtgctgcactctcatgacctaattacctccaaagga-cct--acctccaaataccatcacattgggaattaggctttaacatataaatgttggggggattcaagcattcagttcat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60992549 345 - 192460366 aatgaaagctgacttagttggttcaggctgctataacaaatt-------actgggtggcttaaacaacagaaacgtatttcttacagttctggaggctgaaattctgaaagcagggtgtcagcatggttaggttttgatgatcaacttcttccacggctccctcacatggtggaaaaagagaaagaggaagcaaactctatcctgtgtcttcttat-aagggcactaataccattaatgagtgctgcactctcatgacctaattacctccaaagga-cct--acctccaaataccatcacattgggaattaggctttaacatataaatgttggggggattcaagcattcagttcat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104514 345 - 17224310 aatgaaagctgacttagttggttcaggctgctataacaaatt-------actgggtggcttaaacaacagaaacgtatttcttacagttctggaggctgaaattctgaaagcagggtgtcagcatggttaggttttgatgatcaacttcttccacggctccctcacatggtggaaaaagagaaagaggaagcaaactctatcctgtgtcttcttat-aagggcactaataccattaatgagtgctgcactctcatgacctaattacctccaaagga-cct--acctacaaataccatcacattgggaattaggctttaacatataaatgttggggggattcaagcattcagttcat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17416701 345 - 41321030 AATGAAAGCtgacttagttggttcaggctgctataacaaatt-------actgggtggcttaaacaacagaaacgtatttcttacagttctggaggctgaaattctgaaagcagggtgtcagcatggttaggttttgatgatcaacttcttccacggctccttcacatggtggaaaaagagaaagaggaagcaaactctatcctgtgtcttcttat-aagggcactaataccattaatgagtgctgcactctcatgacctaattacctccaaagga-cct--acctccaaataccatcacattgggaattaggctttaacatataaatgttggggggattcaagcattcagttcat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488165 346 - 101219884 AATGAAAGCtgacttagttggttcaggctgctataacaaatt-------actgggtggcttaaacaacagaaacgtatttcttacagttctggaggctgaaattctgaaagcagggtgccagcatggttaggttttgatgatcaccttcttccacggctccctcacatggtggaaaaagagaaagaggaagcaaactctatcctgtgtcttcttat-aagggcactaataccattaatgagtgctgcactctcatggcctaattacctccaaaggaccct--acctccaaatatcatcacattgggagttaggctttaacatataaatgttggggggattcaagcatttagttcat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874141 345 - 924385 aatgaaagctgacttagttggttcaggctgctataacaaatt-------actgggtggcttaaacaacagaaacgtatttcttacagttctggaggctgaaattctgaaagcagggtgtcagcatggttaggttttgatgatcaacttcttccacggctccctcacatggtggaaaaagagaaagaggaagcaaactctatcctgtgtcttcttat-aagggcactaataccattaatgagtgctgcactctcatgacctaattacctccaaagga-cct--acctccaaataccatcacactgggaattaggctttaacagataaatgttgaggggattcaagcattcagttcat i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46050377 345 - 98464013 AATGAAGGCtgacttagttggttcaggctgctataacaaatt-------actgggtggcttaaacaccagaaatgtatttcttacacttctagaggctgaaattctgaaagcaggctgtcagcatggttgcgttctgatgatcaccttctttcatggcttcctcacatggtggaaaaagagaaagaggaagcaaactctatcatgtattttcttat-aagggggctaataccattaataagtgccccactctcatgacctaactacctccaaagga-tct--aactccaaatgtcatcatataggggattaggctttaacatataaatatcaggggggtacaagcatttagttcat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27721970 345 + 27742158 AATGAAGGCtgacttagttggttcaggctgctataacaaatt-------actgggtggcttaaacaccagaaatgtatttcttacagttctagaggctgaaattctgaaagcaggctgttagcattattgcattctaatgatcaccttcttccatggcttcctcacatggtggaaaaagacaaagaggaagcaaactctatcctgtgttttctttt-aaggaggctaataccattaataagtgccccactctcatgacctaattacctccaaagga-tct--aactccaaatgtcatcatattggggattaggctttaacatataaatatcagggggatacaaacattcagttcat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 259407 340 - 4835464 AATGAAGGCtgacttagttggttcaggctgctataacaagtt-------actgggtggcttcaataccagaaatgtatt-----cagttctagaggctgaaattctgaaagcaggctgtcagcattgttgcgttctgatgatcaccttcttccatggcttccttacatggtggaaaaagacaaagaggaagcaaactctatcctgtgttttcttgt-aagggagctaataccattaataagtgccccactcccatgacctaattacctccaaagga-tca--aactccaaatgtcatcatatcggggattaggctttaacatataaatatcagggggatacaagcattcagttcat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718310 344 + 4093027 AATGAAGGCtgacttagttggttcaggctgctataacaaatt-------aatgggtagcttaaacaccagaaatgtatttctta-agttctagaggctgaaattctgaaagcaggctgtcagcatggttgcattctgatgatcaccttcttccatggcttcgtcacatggtggaaaaagagaaagaggaagcaaactctatcctatgttttcttat-aagggggctaataccattaataagtgccccactctcatgacctaattacctctaaagga-tct--aactccaaatgtcatcatatcagggattaggctttaacatataaatatcagggggatacaagcattcagttcat i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11058131 353 + 30473821 CATGAAAGCCgccttcatcagattggaatgctgtaacaaattaccatgcaccgagtggcttgaaccatatggatttattactcacagt--tggaggccagaagtctgaacctcgggttctagcatagttgggttttgaaggggactttcttccttggtttcctcatgtgggggagatagaggaagaggaagcaagctctctcctggaacttcttataaaggacactaatcctgttcccgagggctgcaccctcatggccaaattacccccctaata-cctccacctccaaatactatcacactggagattcagcttcaacataggaattttgaggggacatgaacattcggtccac i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610989 484 - 9149476 I e rhiRox1.KN296641v1 1373718 849 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227966 848 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e canFam3.chr20 16596637 0 + 58134056 C e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=501246.000000 s hg38.chrUn_KI270749v1 105963 67 + 158759 aatgaaagcaaaagaaacattgaaagaaaTC-AGCA--T------TTTCTTATTCTTCTATCGCTTAGCCTAAAAA- s panTro5.chr3 201993175 67 - 202621043 aATGAAAGCAAAAGAAACACTGAAAGGAATC-AGCA--T------TTTCTTATTCTTCTATTGCTTAGCCTAAAAA- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761215 67 - 205426864 TATGAAAGCAAAAGAAACATTGAAAGGAATC-AGCA--T------TTTCTTATTCTTCTATCGCTTAGCCTAAAAA- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578036 67 + 86207423 aATGAAAGCAGAAGAAACATTGAAAGGAATC-AGCA--T------TTTCTTATTCTTCTATCTCTTAGCCTAAAAA- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061050 67 + 204787373 aAAGAAAGCAGAAGAAACATTGAAAGAAATC-AGCA--T------TTTCTTTTTCTTCTATCGCGTAGGCTAAAGA- i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60992894 67 - 192460366 aaagaaagcagaagaaacattgaaagaaaTC-AGCA--T------TTTCTTTTTCTTCTATCGCGTAGGCTAAAGA- i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11104859 67 - 17224310 aaagaaagcagaagaaacattgaaagaaaTC-AGCA--T------TTTCTTTTTCTTCTATCGCGTAGGCTAAAGA- i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17417046 67 - 41321030 TAAGAAAGCAGAAGAAACATTGAAAGAAATC-AGCA--T------TTTCTTTTTCTTCTATCACGTAGCCTAAAGA- i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64488511 67 - 101219884 aAAGAAAGCAGAAGAAACATTGAAAGGAATC-AGCA--T------TTTCTTTTTCTTCTATCACATAGCCTAAAAA- i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 874486 67 - 924385 aaagaaagcagaagaaacattgaaagaaaTC-AGCA--T------TTTCTTTTTCTTCTAGCACGTAGCCTAAAGA- i manLeu1.NW_012098965v1 C 0 I 1 s calJac3.chr15 46050722 69 - 98464013 aATGAAAGCAGAAGAAACATTGAAAGGAGTC-AGCAAAT------TTTCTTATTCTTCTATCTCTTAGCCTACAAA- i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27722315 69 + 27742158 aATGAAAGCAGAAGAAATGTTGAAAGGAGTC-AGCAAGT------TTTCTTATTCTTCTATCTCTTAGCCTCCAAA- i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 259747 69 - 4835464 aATGAAAGCAGAAGAAACATTGAAAGGAGTC-AGCAAAT------TTTCTTATTCTTCTATCTCTTAGCCTACAAA- i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3718654 62 + 4093027 aATGAAAGCAGAAGAAATATTGAAAGAAGTC-AGCAAAT------TTTCTTAT-------TCTCTTAGCCTACAAA- i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11058484 73 + 30473821 aacaAAAGCAGAAGAGACATTGAAAAGAATC-AACA--TTCAGTATTTATTTATTTTGCAGCCCTTAGCCTGTAAG- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596637 66 + 58134056 AATGAAAGCAGAGGAGATATTGGACAAAGCCAAGTA--T------TTACTTAT---TCTATTCCTTAGCCTGTGAGG i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610989 484 - 9149476 I e rhiRox1.KN296641v1 1373718 849 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1227966 848 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=11662.000000 s hg38.chrUn_KI270749v1 106030 1 + 158759 G s panTro5.chr3 201993242 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761282 1 - 205426864 G i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578103 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061118 1 + 204787373 G i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60992962 1 - 192460366 G i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11104927 1 - 17224310 G i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17417114 1 - 41321030 G i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64488579 1 - 101219884 G i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 874554 1 - 924385 G i manLeu1.NW_012098965v1 I 1 C 0 s rhiRox1.KN296641v1 1374567 1 - 1467263 G i rhiRox1.KN296641v1 I 849 I 186 s rhiBie1.NW_016820128v1 1228814 1 - 2311269 G i rhiBie1.NW_016820128v1 I 848 I 186 s calJac3.chr15 46050792 1 - 98464013 G i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27722385 1 + 27742158 G i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 259817 1 - 4835464 G i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3718717 1 + 4093027 T i aotNan1.NW_018502033v1 I 1 C 0 s otoGar3.GL873534 11058557 1 + 30473821 G i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16596703 1 + 58134056 G i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610989 484 - 9149476 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=247577.000000 s hg38.chrUn_KI270749v1 106031 33 + 158759 TAGGCTTGATTTTAAATACCAGAAAGCAACCAA s panTro5.chr3 201993243 33 - 202621043 TAGGCTTGATTTTAAATACCAGAAAGCAACCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761283 33 - 205426864 TAGGCTTGATTTTAAATACCAGAAAGCAACCAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578104 33 + 86207423 TAGGCTTGATTTTAAATACCAGAAAACAACGAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061119 33 + 204787373 TAGGATTGACTTTAAATACCAGAAAGCAACCAC i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60992963 33 - 192460366 TAGGATTGACTTTAAATACCAGAAAGCAACCAC i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11104928 33 - 17224310 TAGGATTGACTTTAAATACCAGAAAGCAACCAC i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17417115 33 - 41321030 TAGGATTGACTTTAAATACCAGAAAGCAACCAC i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64488580 33 - 101219884 TAGGATTGACTTTAAATACCAGAAAGCAACCAC i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 874555 33 - 924385 TAGGATTGACTTTAAATACCAGAAAGCAACCAC i manLeu1.NW_012098965v1 C 0 I 1 s calJac3.chr15 46050793 33 - 98464013 TAAAATTGTTTTTAAATACCAGAAAGCAACCAC i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27722386 33 + 27742158 TAAAATTGTTTTTAAATACCAGAAAGCAACCAC i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 259818 33 - 4835464 TAAAATTGTTTTTAAATACCAGAAAGCAACCAC i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3718718 33 + 4093027 TAAAATTGTTTTTAAATACCAGAAAGCAACCAC i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11058559 33 + 30473821 GGGAACTGACAGTTAGAAGCAAAAAGCAAACTC i otoGar3.GL873534 I 1 I 1 s canFam3.chr20 16596704 28 + 58134056 TGAGACTAAT----AGTAACAGAAAACAAACA- i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1610989 484 - 9149476 I e rhiRox1.KN296641v1 1374568 186 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1228815 186 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=308103.000000 s hg38.chrUn_KI270749v1 106064 34 + 158759 CTATTTATGCTTCAAAGTTATTTATAGTTTCAGG s panTro5.chr3 201993276 34 - 202621043 CTATTTATGCTTCAAAGTTATTTATAGTTTCAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761316 34 - 205426864 CTATTTATGCTTCAAAGTTATTTATAGTTTCAGG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578137 34 + 86207423 CTATTTATGCTTCAAAGTTATTTATAGTTTCAGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061153 34 + 204787373 CTATTTATACTTCACATTTATTTATAGCTGCAGG i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60992997 34 - 192460366 CTATTTATACTTCACATTTATTTATAGCTGCAGG i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11104962 34 - 17224310 CTATTTATACTTCACATTTATTTATAGCTGCAGG i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17417149 34 - 41321030 CTATTTATACTTCACATTTATTTATAGCTGCAGG i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64488614 30 - 101219884 C----TATACTTCAAAGTTATTTATAGCTGCAGG i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 874589 34 - 924385 CTATTTATACTTCACATTTATTTATAGCTGCAGG i manLeu1.NW_012098965v1 I 1 C 0 s calJac3.chr15 46050827 34 - 98464013 CTATTTATACTTCAAAGTTATTTATAGTTTCAGA i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27722420 34 + 27742158 CTATTAATACTTCAAAGTTATTTATAGTTTCAGA i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 259852 34 - 4835464 CTATTTATACTTCAAAGTTATTTATAGTTTCAAT i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3718752 34 + 4093027 CTATTTATACTTCAAAGTTATTTATAGTTTCAGA i aotNan1.NW_018502033v1 I 1 C 0 s micMur3.chr32 1611473 34 - 9149476 CTATTTATACTTGGAAGTTATTTATAGTTTCAGG i micMur3.chr32 I 484 I 40 s otoGar3.GL873534 11058593 33 + 30473821 CTATTTATACTT-GCAGTTTCTTATGGCTTCAGG i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16596732 33 + 58134056 CTATTTATA-TGCAAAGTTATTAATAGTTTCAAG i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1374568 186 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1228815 186 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=33929.000000 s hg38.chrUn_KI270749v1 106098 6 + 158759 TACGTG s panTro5.chr3 201993310 6 - 202621043 TACGTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761350 6 - 205426864 TACGTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578171 6 + 86207423 TACGTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061187 6 + 204787373 TATGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60993031 6 - 192460366 TATGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11104996 6 - 17224310 TATGTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17417183 6 - 41321030 TATGTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488644 6 - 101219884 TATGTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874623 6 - 924385 TATGTC i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46050861 6 - 98464013 TATGAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722454 6 + 27742158 TATGAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 259886 6 - 4835464 TATGAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718786 6 + 4093027 TATGAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11058626 6 + 30473821 CATGTA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16596765 6 + 58134056 TATGTA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374568 186 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1228815 186 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=851843.000000 s hg38.chrUn_KI270749v1 106104 112 + 158759 TGTagtcatgcatcacttaatgacagggaaatgttctgagaaatgagtccttaggtgattt----gttgtgtcaacatcatagaatgtacttatgctctatgtatacctgcatgat s panTro5.chr3 201993316 112 - 202621043 TGTagtcacgcatcacttaatgacagggaaatgttctgagaaatgagtccttaggtgattt----gttgtgtgagcatcatagaatgtacttatgctctatgtatacctgcatgat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761356 112 - 205426864 TGTagtcatgcatcacttaatgacagggaaatgttctgagaaatgagtccttaggtgatct----gttgtgtgaacatcatagaatgtacttatgctctatgtatacctgcatgat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578177 112 + 86207423 TATagtcatgcatcacttaacgacagggaaatgttctgagaaacgagtccttaggtgattt----gttgtgtgaacatcatagaatgtacttatgctctatgtatacctgcatgat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061193 111 + 204787373 TGTagtcacgcatcccttaacgacaggaaaatgttctgagaaatgagt-cttaggtgattt----gttgtgtggacatcatagaatgtacttatgccctatgtatacctgcatgat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60993037 111 - 192460366 TGTagtcacgcatcccttaacgacaggaaaatgttctgagaaatgagt-cttaggtgattt----gttgtgtggacatcatagaatgtacttatgctctatgtatacctgcatgat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11105002 111 - 17224310 TGTagtcatgcatcccttaacgacaggaaaatgttctgagaaatgagt-cttaggtgattt----gttgtgtggacatcatagaatgtacttatgctctatgtatacctgcatgat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17417189 111 - 41321030 TGTagtcatgcatcacttaacgacaggaaaatgttctgagaaatgagt-cttaggtgattt----gttgtgtggacatcatagaatgtacttatgctctatgtatacctgcatgat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488650 111 - 101219884 TGTagtcatgcatcacttaacaacaggaaaatgttctgagaaatgagt-cttaggtgattt----gttgtgtggacatcatagaatgtacttatgctctatgtatacctgcatgac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874629 111 - 924385 TGTagtcatgcatcacttaacgacaggaaaatgttctgagaaatgagt-cttaggtgattt----gttgtgtggacatcatagaatgtacttatgctctatgtatacctgcatgat i manLeu1.NW_012098965v1 C 0 C 0 s calJac3.chr15 46050867 112 - 98464013 TGTagtcttgcattacttagcaacagggaaatgttctgagaaatgaatccttgggtgattt----gttgtgggaacatcatagaatgtacttacactctctgtataccagcatgat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722460 112 + 27742158 TGTagtcttgcattacttagcaacagggaaatgttctgagaaatgaatccttaggtgattt----gttgtgggaacatcatagagtgtacttacactctctgtataccagcatgat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 259892 112 - 4835464 TGTagtcttgcattacttagcaacagggaaatgttctgagaaatgagtccttaggtgattt----gttgtgggaacatcatagaatgtacttacactctctgtacaccagcatgat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718792 112 + 4093027 TGTagtcttgcatcacttagcaacagggaaatgttctgagaaatgaatccttaggtgattt----gttgtgggaacatcatagaaagtacttacactctctgtataccagcatgat i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11058632 108 + 30473821 GGcagccgtgtggtgctt-ttgacagggatacactgtgagaaacgcattatttgatggcttcgtcattatacacacaccatggagtgtacttacac-------aaatctggatggt i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374568 186 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1228815 186 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e canFam3.chr20 16596771 0 + 58134056 C e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=10424.000000 s hg38.chrUn_KI270749v1 106216 1 + 158759 a s panTro5.chr3 201993428 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761468 1 - 205426864 a i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578289 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061304 1 + 204787373 a i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60993148 1 - 192460366 a i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11105113 1 - 17224310 a i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17417300 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64488761 1 - 101219884 a i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 874740 1 - 924385 a i manLeu1.NW_012098965v1 C 0 I 1 s rhiRox1.KN296641v1 1374754 1 - 1467263 a i rhiRox1.KN296641v1 I 186 I 151 s rhiBie1.NW_016820128v1 1229001 1 - 2311269 a i rhiBie1.NW_016820128v1 I 186 I 151 s calJac3.chr15 46050979 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722572 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260004 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718904 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11058740 1 + 30473821 g i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e canFam3.chr20 16596771 0 + 58134056 C e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=145876.000000 s hg38.chrUn_KI270749v1 106217 18 + 158759 tagcctactacacaccta s panTro5.chr3 201993429 18 - 202621043 tagcctactacacaccta i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761469 18 - 205426864 tagcctactacacaccta i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578290 18 + 86207423 tagcctactacacaccta i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061306 18 + 204787373 cagcctaccacacaccta i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60993150 18 - 192460366 cagcctaccacacaccta i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11105115 18 - 17224310 cagcctaccacacaccta i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17417302 18 - 41321030 cagcctaccacacaccta i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64488763 18 - 101219884 cagcctaccacacaccta i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 874742 18 - 924385 cagcctacaacacaccta i manLeu1.NW_012098965v1 I 1 C 0 s calJac3.chr15 46050980 18 - 98464013 taatctattacacaccta i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722573 18 + 27742158 taacctattacacaccta i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260005 18 - 4835464 taacctattacacaccta i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718905 18 + 4093027 taacctattacacaccta i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11058741 18 + 30473821 tggcctattacacacctc i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374755 151 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229002 151 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e canFam3.chr20 16596771 0 + 58134056 C e dasNov3.JH563077 1815775 573 - 2187301 I e colAng1.NW_012114711v1 3872757 0 + 10587913 I a score=693745.000000 s hg38.chrUn_KI270749v1 106235 80 + 158759 ggctatgtggtatagagcctattgctcttcacttttaagcctgtatagcttgtgattg-ttccaaatgctgcaggcaattg s panTro5.chr3 201993447 81 - 202621043 ggctatgtggtatagagcctattgctcttcgcttttaagcctgtatagctcgtgattgctccccaatactgcaggcaattg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761487 80 - 205426864 ggctatgtggtatagagcctattgctcttcgcttttaagcctgtatagcttgtgattg-ttcccaatactgcaggcaattg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578308 79 + 86207423 ggctatgtggtatagagcctattgctcttggc-tttaagcctgtatggcttgtgattg-ttccaaatactgcaggcaattg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061324 79 + 204787373 ggttatatggtatagagcctattgctcttggc-tttaagcctgtatagcttgtgattg-ttccaaatacggcagccaattg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60993168 79 - 192460366 ggttatatggtatagagcctattgctcttggc-tttaagcctgtatagcttgtgattg-ttccaaatacggcagccaattg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11105133 79 - 17224310 ggttatatggtatagagcctattgctcttggc-tttaagcctgtatagcttgtgattg-ttccaaatacggcagccaattg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17417320 79 - 41321030 ggttatatggtatagagcctattgctcttggc-tttaagcctgtatagcttgtgattg-ttccaaatacggcagccaattg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488781 79 - 101219884 ggctatatggtatagagcctattgctcttggc-tttaagcctgtatagcttgtgattg-ttccaaatacggcagccaattg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874760 79 - 924385 ggttatatggtatagagcctattgctcttggc-tttaagcctgtatagcttgtgattg-ttccaaatacggcagccaattg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6715753 79 - 10587913 ggctatatggtatagagcctactgttctaggc-tttaagcctgtatagcttgtgatta-ttccaaacacggcaggcaattg i colAng1.NW_012114711v1 I 792 C 0 s calJac3.chr15 46050998 79 - 98464013 ggctatatggtatagagtctattgctcttggc-tgcaaacctgtacagcttgtgattg-ttccaaatactgtaggcaattg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722591 79 + 27742158 ggctatatgatatagagtctgttgctcttggc-tgcaaacctgtacagcttgtgattg-ttccaaatactgtaggcaattg i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260023 79 - 4835464 ggctatatggtatagagtctattgcttttggc-tgcaaacctgtacagcttgtgattg-ttccaaatactgtaggcaattg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3718923 79 + 4093027 ggctatatggtatagagtctattgctcttggc-tgcaaacctgtacaacttgtgattg-ttccaaatactgtaggcaattg i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11058759 77 + 30473821 cgctgtacagtgt--agcctgttgctctaggc-tgcaattctgtataacatcttactg-ttttgaacactgcagaccagtg i otoGar3.GL873534 C 0 I 397 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374755 151 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229002 151 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e canFam3.chr20 16596771 0 + 58134056 C e dasNov3.JH563077 1815775 573 - 2187301 I a score=397177.000000 s hg38.chrUn_KI270749v1 106315 53 + 158759 taacacaacggtaagtatttatgtatataaacatgtcaaaataaaaaatgtac s panTro5.chr3 201993528 53 - 202621043 taacacaatggtaagtatttatgtatataaacatgtcaaaataaaaaatgtat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761567 53 - 205426864 taacacaatggtaagtatttatgtatataaacatgtcaaaataaaaaatgtat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578387 53 + 86207423 taacacaacggtaagtatttatgtatataaacatgtcaaaataaaaaatgtac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061403 52 + 204787373 taacacaatggtaagtatttatgtatataaacatgtcaaaat-aaaaatgtac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60993247 52 - 192460366 taacacaatggtaagtatttatgtatataaacatgtcaaaat-aaaaatgtac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11105212 52 - 17224310 taacacaatggtaattatttatgtatataaacatgtcaaaat-aaaaatgtac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17417399 52 - 41321030 taacacaatggtaagtatttatgtatataaacatgtcaaaat-aaaaatgtac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488860 53 - 101219884 taatacaacggtaagtatttatgtatataaacatgtcaaaataaaaaatgtac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874839 52 - 924385 taacacaatggtaagtatttatgtatataaacatgtgaaaat-aaaaatgtac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6715832 53 - 10587913 taacacaacggtaagtatttatgtatataaacatgtcaaaataaaaaatgtac i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46051077 49 - 98464013 taacacaacagtaagcatttg-gtatctaaacatgttaaaataaaaa---tac i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722670 52 + 27742158 taacacaacagcaagcatttg-gtatctaaacgtgtcaaaataaaaaaggtac i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260102 52 - 4835464 taacacaacagtaagcatttg-atatctaaacatgtcaaaataaaaaaggtat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719002 52 + 4093027 taacacaacagtaagcatttg-gtatctaaacatgtcaaaataaaaaaggtac i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374755 151 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229002 151 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e otoGar3.GL873534 11058836 397 + 30473821 I e canFam3.chr20 16596771 0 + 58134056 C e dasNov3.JH563077 1815775 573 - 2187301 I a score=68407.000000 s hg38.chrUn_KI270749v1 106368 6 + 158759 agcagt s panTro5.chr3 201993581 6 - 202621043 aggaat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761620 6 - 205426864 agtaat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578440 6 + 86207423 agtaat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061455 6 + 204787373 agtaat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60993299 6 - 192460366 agtaat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11105264 6 - 17224310 agtaat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17417451 6 - 41321030 agtaat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488913 6 - 101219884 agtaat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874891 6 - 924385 agtaat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6715885 6 - 10587913 agtaat i colAng1.NW_012114711v1 C 0 I 6 s rhiRox1.KN296641v1 1374906 6 - 1467263 agtaat i rhiRox1.KN296641v1 I 151 I 606 s rhiBie1.NW_016820128v1 1229153 6 - 2311269 agtaat i rhiBie1.NW_016820128v1 I 151 I 606 s calJac3.chr15 46051126 6 - 98464013 agtaat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722722 6 + 27742158 agtaat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260154 6 - 4835464 agtaat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719054 6 + 4093027 agtaat i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e otoGar3.GL873534 11058836 397 + 30473821 I e canFam3.chr20 16596771 0 + 58134056 C e dasNov3.JH563077 1815775 573 - 2187301 I a score=681873.000000 s hg38.chrUn_KI270749v1 106374 79 + 158759 aatatgatattacatccttatggaaccaccatggtatatgcagaccactattgaactaa--attattatataatgaatgac s panTro5.chr3 201993587 79 - 202621043 aatatgatattacatccttatggaaccaccatggtatatgcagaccattattgaactaa--attattatataatgaatgac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761626 79 - 205426864 aatatgatattacatccttatggaaccaccatggtatatgcagaccattattgaactaa--attattatataatgaatgac i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578446 79 + 86207423 aatatgatattaccttcttatggaaccaccatggtatatgcagaccattattgaactaa--attattatataatgaatgac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061461 79 + 204787373 aatatgatatttcattcttatgggaccaccatggtatatgcagaccattattgaactga--attattatataatgaatgac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60993305 79 - 192460366 aatatgatatttcattcttatgggaccaccatggtatatgcagaccattattgaactga--attattatataatgaatgac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11105270 79 - 17224310 aatatgatatttcattcttatgggaccaccatggtatatgcagaccattattgaactga--attattatataatgaatgac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17417457 79 - 41321030 aatatgatatttcattcttatgggaccaccatggtatatgcagaccattattgaactga--attattatataatgaatgac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488919 79 - 101219884 aatatggtattacattcttatgggaccaccatggtacatgcagaccattattgaactga--attattatataatgaatgac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874897 79 - 924385 aatatgatatttcattcttatgggaccaccatggtatatgcagaccattattgaactga--attattatataatgaatgac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6715897 79 - 10587913 aatatgatattacattcttatgggaccactatggtatgtgcagaccattattgaactga--attattatataatgaatgac i colAng1.NW_012114711v1 I 6 C 0 s calJac3.chr15 46051132 81 - 98464013 aatatggtattacattcttatgagaccaccatggtatatgcagaccattattgaactaaatattgttatataatgaatgac i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722728 81 + 27742158 aatatggtattacattgttatgagaccaccatggtatatgcagacgattaatgaactaaatattgttatataatgaatgac i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260160 79 - 4835464 aatatggtattacattcttatgagaccaccgtggtatatgcagaccattattgaactaaatattgttatataatgaatg-- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719060 81 + 4093027 aatatggtattacattcttatgagaccaccatggtatatgcagaccattattgaactaaatattgttatataatgaatgac i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374912 606 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229159 606 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e otoGar3.GL873534 11058836 397 + 30473821 I e canFam3.chr20 16596771 0 + 58134056 C e dasNov3.JH563077 1815775 573 - 2187301 I a score=238382.000000 s hg38.chrUn_KI270749v1 106453 27 + 158759 tgTATGCATATTTATGTATTAACACAC s panTro5.chr3 201993666 27 - 202621043 tgTATGCATATTTATGTATTAACACAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761705 27 - 205426864 tgTATGCATATTTATGTATTAACACAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578525 27 + 86207423 tgTATGCATATTTATGTATTAACACAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061540 24 + 204787373 --tATGCATATTTATGTA-TAGCACAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60993384 25 - 192460366 --tATGCATATTTATGTATTAGCACAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11105349 25 - 17224310 --tATGAATATTTATGTATTAGCACAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17417536 25 - 41321030 --tATGCATATTTATGTATTAGCACAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64488998 25 - 101219884 --tATGCATATTTACGTATTAGCACAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 874976 25 - 924385 --tATGCATATTTATGTATTAGCACAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6715976 25 - 10587913 --tATGCATATTTATGTATTAACACAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46051213 25 - 98464013 --tATGCATATTTATGTATTAAAACAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722809 27 + 27742158 tgTATGCATATTTATGTATTAAAACAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260239 25 - 4835464 --TATGCATATTTATGTGTTAAAACAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719141 27 + 4093027 tATATGCATATTTATGTATTAAAACAC i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16596771 27 + 58134056 TGTATGCGTATTTATGTATTCATACAC i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374912 606 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229159 606 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e otoGar3.GL873534 11058836 397 + 30473821 I e dasNov3.JH563077 1815775 573 - 2187301 I a score=652483.000000 s hg38.chrUn_KI270749v1 106480 67 + 158759 TAGCTATGCGTTTGTACAGATTG--GCATTCAGTAAATTTTGTATGCTTTTTTCTGgggtttggcaaac s panTro5.chr3 201993693 67 - 202621043 TAGCTATGCGTTTGTACAGATTG--GCATTCAGTAAATTTTGTATGCTTTTTTCTGgggtttggcaaac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761732 67 - 205426864 TAGCTATGCGTTTGTACAGATTG--GCATTCAGTAAATTTTGTATGCTTTTTTCTGgggtttggcaaac i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578552 67 + 86207423 TAGCTATGCGTTTGTACAGATTG--GCATTCAGTAAATTTTGTATGCTTTTTTCTGgggtttggcaaac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061564 67 + 204787373 TAGCTATGCATTTGTACAGATTG--GCCTTCGGTAAATTTTAAACGTTTTTTTCTGGGGTTTGGCAAAC i rheMac8.chr2 C 0 I 36 s macFas5.chr2 60993409 67 - 192460366 TAGCTATGCATTTGTACAGATTG--GCCTTCGGTAAATTTTAAACGTTTTTTTCTGGGGTTTGGCAAAC i macFas5.chr2 C 0 I 19 s macNem1.NW_012018021v1 11105374 67 - 17224310 TAGCTATGCATTTGTACAGATTG--GCCTTCGGTAAATTTTAAACGTTTTTTTCTGGGGTTTGGCAAAC i macNem1.NW_012018021v1 C 0 I 36 s cerAty1.NW_012009469v1 17417561 67 - 41321030 TAGCTATGCATTTGTACAGATTG--GCCTTCGGTAAATTTTAAACGCTTTTTTCTGGGGTTTGGCAAAC i cerAty1.NW_012009469v1 C 0 I 36 s chlSab2.chr22 64489023 67 - 101219884 TAGCTATGCATTTGTACAGATTG--GCCTTCAGTAACTTTTACACGCTTTTTTCTGGGGTTTGGCAAAT i chlSab2.chr22 C 0 I 36 s manLeu1.NW_012098965v1 875001 67 - 924385 TAGCTATGCATTTGTACAGATTG--GCCTTCGGTAAATTTTAAACGCTTTTTTCTGGGGTTTGGCAAAG i manLeu1.NW_012098965v1 C 0 I 36 s colAng1.NW_012114711v1 6716001 67 - 10587913 TAGCTATGCATTTGTACAGATTG--GCCTTCAGTAAATTGTATACACTTTTTTCTGGGGTTTGGAAAAC i colAng1.NW_012114711v1 C 0 I 36 s calJac3.chr15 46051238 67 - 98464013 TAGCTATACATTTATATATATTG--GCATTCAGTAAATTTTATTTGCTTTTTTCTGgggtttggcaaac i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722836 67 + 27742158 TAGATATACATTTATACAGATTG--GCATTCAGCAAATTTTATTTGCTTTTTTCTTgggtttggcaaac i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260264 67 - 4835464 TAGCTATACATTTGTACAGATTG--GCATTCAGCAAATTTTATTTGCTTTTTTCTGgggcttggcaaac i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719168 67 + 4093027 TAGCTATACATTTATACAGATTG--GTATTCAGTAAATTTTATTTGCTTTTTTCTGAggtttggcaaac i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16596798 63 + 58134056 ----TATGCACTGGCATATATTG--ATATTCAGTTAAATTTATATACTTTATTCTagggattggcaatc i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1816348 69 - 2187301 TAGGTATGTATTTATGCATATTTACACATTCAGTAAATTTTATATATTTTCTTCcaggggttggcaaac i dasNov3.JH563077 I 573 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374912 606 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229159 606 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e otoGar3.GL873534 11058836 397 + 30473821 I a score=22550.000000 s hg38.chrUn_KI270749v1 106547 6 + 158759 tatggc s panTro5.chr3 201993760 6 - 202621043 tatggc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761799 6 - 205426864 tatggc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578619 6 + 86207423 tatggc i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 60993495 6 - 192460366 Tttggc i macFas5.chr2 I 19 I 11 s calJac3.chr15 46051305 6 - 98464013 tatggc i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722903 6 + 27742158 tacggc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260331 6 - 4835464 tatggc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719235 6 + 4093027 tatggc i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16596861 6 + 58134056 tatgac i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1816417 6 - 2187301 tacatc i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374912 606 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229159 606 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e otoGar3.GL873534 11058836 397 + 30473821 I e manLeu1.NW_012098965v1 875068 36 - 924385 I e macNem1.NW_012018021v1 11105441 36 - 17224310 I e rheMac8.chr2 66061631 36 + 204787373 I e colAng1.NW_012114711v1 6716068 36 - 10587913 I e chlSab2.chr22 64489090 36 - 101219884 I e cerAty1.NW_012009469v1 17417628 36 - 41321030 I a score=36441.000000 s hg38.chrUn_KI270749v1 106553 5 + 158759 cctca- s panTro5.chr3 201993766 5 - 202621043 cctca- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761805 5 - 205426864 cctca- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578625 5 + 86207423 cctca- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061667 5 + 204787373 cctca- i rheMac8.chr2 I 36 C 0 s macFas5.chr2 60993512 5 - 192460366 cctca- i macFas5.chr2 I 11 C 0 s macNem1.NW_012018021v1 11105477 5 - 17224310 cctca- i macNem1.NW_012018021v1 I 36 C 0 s cerAty1.NW_012009469v1 17417664 5 - 41321030 cctca- i cerAty1.NW_012009469v1 I 36 C 0 s chlSab2.chr22 64489126 5 - 101219884 tctca- i chlSab2.chr22 I 36 C 0 s manLeu1.NW_012098965v1 875104 5 - 924385 cctca- i manLeu1.NW_012098965v1 I 36 C 0 s colAng1.NW_012114711v1 6716104 5 - 10587913 cctca- i colAng1.NW_012114711v1 I 36 C 0 s calJac3.chr15 46051311 5 - 98464013 cctca- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722909 5 + 27742158 cctca- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260337 5 - 4835464 cctca- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719241 5 + 4093027 cctca- i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16596867 2 + 58134056 -ct--- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1816423 3 - 2187301 ---tat i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374912 606 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229159 606 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e otoGar3.GL873534 11058836 397 + 30473821 I a score=2362477.000000 s hg38.chrUn_KI270749v1 106558 240 + 158759 aattaaatcaaacccacctcc-gt----------------------------attcacagctaaagttttattggaacaaaaccacattcattcgttgatgtactgtct--g-gttacttttatgttacaatggcagagt-taagtggt---tatggcagagaacataatgtcctcaaagcccaaaac--atagactatctggccctttacagaaagagttgatcaacttttgGTTTATTCCATAGAGCAAATATGGGACTCTCTACAAATCCCAATT s panTro5.chr3 201993771 239 - 202621043 aattaaatcaaacccacctcc-at----------------------------attcacagctaaagttttattggaacaaaaccacattcattcattgatgtactgtct--g-gttgcttttatgttacaatggcagagt-taagtggt---tatggcagagaacataatgtcctcaaagcccaaaac--gt-gactatctggccctttacagaaagagttgatcaacttttgGTTTATTCCATAGAGCAAATATGGGACTCTCAACAAATCCCaatt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204761810 239 - 205426864 aattaaatcaaacccacctcc-at----------------------------attcacagctaaagttttattggaacaaaaccacattcattcattgatgtactgtct--g-gttgcttttatgttacaatggcagagt-taagtggt---tatggcagagaacataatgtcctcaaagcccaaaac--gt-gactatctggccctttacagaaagagttgatcaacttttgGTTTATTCCATAGAGCAAATATGGGACTCTCAACAAATCCCAATT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578630 235 + 86207423 aattaaatcaaacccacctac-at----------------------------attcacagctaaagttttactggaacaaaaccacattcattcattga-----tgtct--g-gttgcttttatgttacaatggcagagt-taagtagt---tatggcagagaacataatgtcctcaaagcccaaaac--atagactatctggccctttacagaaagaggtgatcaacttttgGTTTATTCCATAGAGCAAATATGGGACTCTCAACAAATCCCAATT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061672 238 + 204787373 aattaaaccaaaccaacctcc-ac----------------------------tttcacagctaaagttttgttggaacaaaaccacattcattcattgatgtactgtct--g-gttgcttttgtgttacaatggcagagt-taagtagt---tatcacagtgaacataatgtcctcaaggcctaaaac--a--gactatctgatccttcacagaaagagttgatcaacttttgGTTTATTCCATAGAGCAAATATGGGACTCTCAACAAATCCCAATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60993517 238 - 192460366 aattaaaccaaaccaacctcc-ac----------------------------tttcacagctaaagttttgttggaacaaaaccacattcattcattgatgtactgtct--g-gttgcttttgtgttacaatggcagagt-taagtagt---tatgacagtgaacataatgtcctcaaggcctaaaac--a--gactatctgatccttcacagaaagagttgatcaacttttgGTTTATTCCATAGAGCAAATATGGGACTCTCAACAAATCCCAATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11105482 238 - 17224310 aattaaaccaaaccaacctcc-ac----------------------------tttcacagctaaagttttgttggaacaaaaccacattcattcattgatgtactgtct--g-gttgcttttgtgttacaatggcagagt-taagtagt---tatgacagtgaacataatgtcctcaaggcctaaaac--a--gactatctgatccttcacagaaagagttgatcaacttttgGTTTATTCCATAGAGCAAATATGGGACTCTCAACAAATCCCAATT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17417669 238 - 41321030 aattaaaccaaaccaacctcc-ac----------------------------tttcacagctaaagttttgttggaacaaaaccacaatcattcattgatgtactgtct--g-gttgcttttgtgttacaatggcagaat-taagtagt---tatgacactgaacataatgtcctcaaggcctaaaac--g--gactatctgatccttcacagaaagagttgatcaacttttgGTTTATTCCATAGAGCAAATATGGGACTCTCAACAAATCCCAATT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489131 238 - 101219884 aattaaaccaaaccaacctcc-ac----------------------------tttcacagctaaagttttgttggaacaaaaccacattcattcattgacgtaccgtct--g-gttgcttttgtgttacaatggcagagt-taagtagt---tatgacagtgaacataatgtcctcaaggcctaaaac--a--gactatctgatccttcacagaaagagttgatcaacttttgGTTTATTCCATAGAGCAAATATGGGACTCTCAACAAATCCCAATT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875109 238 - 924385 aattaaaccaaaccaacctcc-ac----------------------------tttcacagctaaagttttgttggaacaaaaccacattcattcattgatgtactgtct--g-gttgcttttgtgttacaatggcatagt-taagtagt---tatgacagtgaacataatgtcttcaaggcctaaaac--a--gactatctgatccttcacagaaagagttgatcaacttttgGTTTATTCCATAGAGCAAATATGGGACTCTCAACAAATCCCAATT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716109 240 - 10587913 aattaaaccaaaccaacctct-ac----------------------------tttcacagccaaagttttatttgaacaaaaccacattcattcattgatgtactgtct--g-gttgcttttgtgttacaatggcagagt-taagtagt---tatgatagtgaccataatgtcctcaaggcctaaaacata--gactatctgacccttcacagaaagagttgatcaacttttgGTTTATTCCATAGAGCAAATATGGGACTCTCAACAAATGGCAATT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46051316 235 - 98464013 agtt-----aaacccacctcc-at----------------------------tttcacagctacggtattattagaacaaaaccacattcatttgttgatgtattctct--g-gctgtgtctgtgttacaatggcagagt-taagtagt---taaggcagagaacataatgtcctcaaagcctaaaac--atggactatctggccctttacagaaagaatttatcaacttttgGGTTATCCCATATAGCAAATATGGGGCTCTCAACAAATCCAAGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27722914 235 + 27742158 agtt-----aaacccaccttc-at----------------------------tttcacagctatagtattattagaacaaaaccatattcatttgttgatgtattgtct--g-gcttcatttgtgttacaatgtcagagt-taagtagt---tatggcagagaacataatatcctcaaagcctaaaac--atggactatctggccctttatagaaagagtttatcaacttttgGTTTATCCCATAAAGCAAATATAGGGCTCTCAACAAATCCCAATT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260342 235 - 4835464 agtt-----aaacccacctcc-at----------------------------tttcacagctatagtattattagaacaaaaccatattcatttgctgatgtattgtct--g-gctgcgtttgtgttacaatggcagagt-taggtagt---tatggcagagaacataatgccctcaaagcctaaaac--atggactatctggtcctttacagaaagagtttatcaacttttgGTTTATCCCATAGAGCAAATATGGGGCTCTCAACAAATCTCAATT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719246 234 + 4093027 agtt-----aaatccatctcc-at----------------------------tttcacagctgcagtattattagaacaaaaccacattcatttgttgatgtattgtct--g-gctgcatttgtgttacaatagcagagt-taagtagt---tatggcagagaacataatgtcctcaaagcctaaaac--atggactatctggccctttacagaaagagttcatcaac-TTTGGTTTATCCCATAGAGCAAATATGGGGCTCTCAACAAATCCCAATT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11059233 263 + 30473821 AATTACAACACAGCTGTCTTT-GTGTTATGATACATAATACAAATTCACCCATttcacaaataacgttttattggaaca---------ctattaatttatataccatcc--a-gctgcttttatattacaaccacagagtacatatattctctgtgacagagaatgtaacatgctcaaaacctaaaat--atagatggtctggctctttccagaaaaagtttagcaagctctAGTTTATTCCATGGAGTAAATATGAGACTCTCAACAAAGCCCAATT i otoGar3.GL873534 I 397 I 141 s canFam3.chr20 16596869 240 + 58134056 -atcaaatccaatccacctcctgt----------------------------tttcacaaatgaagttttattagaacacaatcacactcactaatttatgtattgtctacg-gttgcttgtgtgctacaactgcagaat-taagtagt---tgtgacagagaatataacacaatcaaaa-ctaaaat--acagaccatgtgcccctttatagaaacagtttattgacccctgATTGAT-CCAAAGACTAAATATGGGACTCTCAGTATATCCTAGTA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1816426 230 - 2187301 aggcaaattcaagccacctcc-ta----------------------------ctttttttaaatagttttattggaaca-------actcattcacttatatattgtct--atgctattttcatactataatgtcagagt-taagtagt---tctga---ggatcatatgaccctcaaaacctaaaat--acatgttatctgaccctttatagaaaaagatggtctattcctgGTTTATTCAATAATCTGAATTTGGGATTGTCAAGAGATCCTAAT- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374912 606 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229159 606 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I a score=309126.000000 s hg38.chrUn_KI270749v1 106798 38 + 158759 AGCACCTat----------aac------tacaataatagtaataatt-----------------------acagtag s panTro5.chr3 201994010 38 - 202621043 agtacctat----------aac------tacaataatagtaataatt-----------------------acaatag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762049 38 - 205426864 AGTACCTat----------aac------tacaataatagtaatagtt-----------------------acaatag i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578865 38 + 86207423 AGTACCCAT----------AAC------TACAATAATAGTAATAACT-----------------------ACAATAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061910 38 + 204787373 AGTATCTAT----------AAC------TAAAATAATAGTAATAACT-----------------------ACaataa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60993755 38 - 192460366 AGTATCTAT----------AAC------TAAAATAATAGTAATAACC-----------------------ACAATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11105720 38 - 17224310 AGTATCTAT----------AAC------TAAAATAATAGTAATAACT-----------------------ACaataa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17417907 38 - 41321030 AGTATCTAT----------AAC------TAAAATAATAGTAATAACT-----------------------ACaataa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489369 38 - 101219884 AGTATCTAT----------AAC------TAAAATAATAGTAATAACT-----------------------ACAATAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875347 38 - 924385 AGTATCTAA----------AAC------TAAAATAATAGTAATAACT-----------------------ACaataa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716349 38 - 10587913 AGTATCTat----------aac------taaaataatagtaataact-----------------------acaataa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46051551 38 - 98464013 AATGCCTAT----------AAC------TACAGTAGTAGTAATAACT-----------------------ACaataa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723149 38 + 27742158 AATACCCAT----------AAC------TACAGTAGTAGTAATAACT-----------------------ACAATAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260577 38 - 4835464 AATACCCAT----------AGC------TACAGTAGTAGTAATAACT-----------------------ACaataa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719480 38 + 4093027 AATACCCAT----------AAC------TAAAGTAGTAGTAATAACT-----------------------ACaataa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11059637 77 + 30473821 AGCACCTATTTTACCCGGGAACTTCATGTACAAGAATAGTAATGATTGTTATCAGTTATTAAGTACATACATAGTAA i otoGar3.GL873534 I 141 I 29 s canFam3.chr20 16597109 17 + 58134056 AGTAACTGT----------ATC------CACAA-------------------------------------------- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1816656 30 - 2187301 ---ACTTAT----------AAC------TGCAATAGTaataataatt-----------------------ac----- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592176 628 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611507 40 - 9149476 I e rhiRox1.KN296641v1 1374912 606 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229159 606 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I a score=815594.000000 s hg38.chrUn_KI270749v1 106836 72 + 158759 tagtaataatTGTTATCAGTTATTAAATGCATAC---------------------------------------------------------------------------TTTGTGCC-AAAATTAGACTAAG---------------------------CTGAAAGAGCAGGGTC s panTro5.chr3 201994048 72 - 202621043 tagtaataatTGTTATCAGGTATTAAATGCATAC---------------------------------------------------------------------------TTTGTGCC-AAAATTAGACTAAG---------------------------CTGAAAGAGCAGGGTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762087 72 - 205426864 tagtaataatTGTTATCAGTTATTAAATGCATAC---------------------------------------------------------------------------TTTGTGCC-AAAATTAGACTAAG---------------------------CTGAAAGAGCAGGGTC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578903 72 + 86207423 TAGTAACAATTgttatcagttattaaatgcacac---------------------------------------------------------------------------tttgtgcc-aaaattatactaag---------------------------cTGAAAGAGCAGGGTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66061948 72 + 204787373 tagtaacaatagttatcagttattaaatgcatac---------------------------------------------------------------------------tttgtgcc-aatattatactaag---------------------------cTGAAAGAGCAGTGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60993793 72 - 192460366 TAGTAACAATAGTTATCAGTTATTAAATGCATAC---------------------------------------------------------------------------TTTGTGCC-AATATTATACTAAG---------------------------CTGAAAGAGCAGTGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11105758 72 - 17224310 tagtaacaatagttatcagttattaaatgcatat---------------------------------------------------------------------------tttgtgcc-aatattatactaag---------------------------cTGAAAGAGCAGTGTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17417945 72 - 41321030 tagtaacaatagttatcagttattaaatgcatac---------------------------------------------------------------------------tttgtgcc-aatattatactaag---------------------------cTGAAAGAGCAGTGTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489407 72 - 101219884 TAGTAATAATAGTTATCAGTGATAAAATGCATAC---------------------------------------------------------------------------TTTGTGCC-AATATTATACTAAG---------------------------CTGAAAGAGCAGTGTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875385 72 - 924385 tagaaacaatagttatcagttattaaatgcatac---------------------------------------------------------------------------tttgtgcc-aatattatactaag---------------------------cTGAAAGAGCAATGTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716387 72 - 10587913 taGTaatgataattatcagttattaaatgcatac---------------------------------------------------------------------------tttgtgcc-aatattatactaag---------------------------cTGAAAGAGCAGGGTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46051589 72 - 98464013 tagaaataatttttaccagttattaaatgcatac---------------------------------------------------------------------------tttgtgcc-caaattatactaag---------------------------cTGAAAGAGCGGTGTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723187 72 + 27742158 TAGAAATAATTTTTACCAGTTATTAAACGCATAC---------------------------------------------------------------------------TTTGTGCT-AAAATTATACAAAG---------------------------CTGAAAGAGCAGTGTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260615 72 - 4835464 tagaaataatttttaccagttattaaatgcatac---------------------------------------------------------------------------tttgtacc-aaaattatactaag---------------------------cTGAAAGAGCAGTGTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719518 72 + 4093027 tagaaataatttttaccagttattacatgcatac---------------------------------------------------------------------------tttgtgcc-aaaattatactaag---------------------------cTGAAAGAGCAGTGTC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1611547 73 - 9149476 TAGTAATAATTGTCATCAATTATTAAGTGCATAG---------------------------------------------------------------------------TTTGTACCCCAAATTATGCTAAG---------------------------CTAGAAGGGCAGGGCC i micMur3.chr32 I 40 C 0 s proCoq1.NW_012148064v1 592804 73 + 2414909 TAGTAATAGCTATTATCAATTATTAAGTGCATAC---------------------------------------------------------------------------TTTGCACCCAAAATTACACTAAG---------------------------CTGGAAGGGCAGGGCC i proCoq1.NW_012148064v1 I 628 C 0 s otoGar3.GL873534 11059743 148 + 30473821 TAGTAATAATTGTTATCAGTTATTAAGTACATACATAGTAATAATTGTTATTGGTTATTAAGTACATATGTAGTAATGATTGTTATCAGTTATTAAGTACATAAAACATTTTGTGCCTAAAATTATGCTAAG---------------------------CTGGACGGGAAGGATC i otoGar3.GL873534 I 29 C 0 s canFam3.chr20 16597126 73 + 58134056 TAGTAGTAATTTCTATAATTTATTGAACTCATAG---------------------------------------------------------------------------TTTTTGGTAAAAATCATGCTTAG---------------------------CTGGAAGGGCAGCATC i canFam3.chr20 C 0 I 522 s dasNov3.JH563077 1816686 84 - 2187301 ----------------tatttattgaatgcatac---------------------------------------------------------------------------tatgcccaagaaactttactaagAAGTTCTTCTGAATTTAATCCTGTGACATGGAAGGACAGTGTC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1374912 606 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229159 606 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I a score=477343.000000 s hg38.chrUn_KI270749v1 106908 39 + 158759 CTATGATTTATAGCCTCATCCAAATCAC-ATGAAAT--GAGG s panTro5.chr3 201994120 39 - 202621043 CTATGATTTATAGCCTCATCAAAATCAC-ATGAAAT--GAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762159 39 - 205426864 CTATGATTTATAGCCTCATCAAAATCAC-ATGAAAT--GAGG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67578975 39 + 86207423 CTATGATTTATAGCCTCATCAAAATCAC-ATGAAAT--GAGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062020 39 + 204787373 CTATGATTTATAGCCTCATCAAAATCAC-ATGAAAT--GAGG i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60993865 39 - 192460366 CTATGATTTATAGCCTCATCAAAATCAC-ATGAAAT--GAGG i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11105830 39 - 17224310 CTATGATTTATAGCCTCATCAAAATCAC-ATGAAAT--GAGG i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17418017 39 - 41321030 CTATGATGTATAGCCTCATCAAAATCAC-ATGAAAT--GAGG i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64489479 39 - 101219884 CTATGATTTATAGCCTCATCAAAATCAC-ATGAAAT--GAGG i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 875457 39 - 924385 CTATGATTTATAGCCTCATCAAAATCAC-ATGAAAT--GAGG i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6716459 39 - 10587913 CTATGATTTATAGCCTCATCAAAATCAC-ATGAAAT--TAGG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46051661 38 - 98464013 CTATAATTTATAGCCTCATCAACATCAC-ATAAAAT--GAA- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723259 38 + 27742158 CTATAATTTATAGTCTCATCAAAATCAC-ATGAAAT--GAA- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260687 38 - 4835464 CTATAATTTATAGTCTCATCAAAATTAC-ATGAAAT--GAA- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719590 38 + 4093027 CTATAATTTATAGCCTCATCAAAATCAC-GTGAAAT--GAA- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1611620 39 - 9149476 TTGTGATTTAGAGCCTCATCTGAATCAT-ATGGAATGGGA-- i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 592877 39 + 2414909 TTGTGATTTACAGCCTCATCTGAATCAC-ACGGAATGGGA-- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11059891 37 + 30473821 ATGTGATTCATAGCCTCATCTGAATCAC-ACGGAAT--GA-- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16597721 39 + 58134056 CTATGATTGGCAGCCTCATCAGAATCAC-ATAGAAT--GGGA i canFam3.chr20 I 522 C 0 s dasNov3.JH563077 1816770 40 - 2187301 CTATGAGTAGCAGCCTCATTAGAATCACAATGGAAT--GGGA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1374912 606 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229159 606 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I a score=21021.000000 s hg38.chrUn_KI270749v1 106947 1 + 158759 A s panTro5.chr3 201994159 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762198 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579014 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062060 1 + 204787373 A i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60993905 1 - 192460366 A i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11105870 1 - 17224310 A i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17418057 1 - 41321030 A i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64489519 1 - 101219884 A i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 875497 1 - 924385 A i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6716498 1 - 10587913 A i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1375518 1 - 1467263 A i rhiRox1.KN296641v1 I 606 I 378 s rhiBie1.NW_016820128v1 1229765 1 - 2311269 A i rhiBie1.NW_016820128v1 I 606 I 378 s calJac3.chr15 46051699 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723297 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260725 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719628 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1611659 1 - 9149476 A i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 592916 1 + 2414909 A i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11059928 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16597760 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1816810 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e tarSyr2.KE939134v1 171907 2391 + 958716 I a score=169251.000000 s hg38.chrUn_KI270749v1 106948 13 + 158759 AAGAATAGT----TAGA s panTro5.chr3 201994160 13 - 202621043 AAGAATAGT----TAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762199 13 - 205426864 AAGAATAGT----TAGA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579015 13 + 86207423 AAGAATAGT----TAGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062061 13 + 204787373 AAAAATAGT----TAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60993906 13 - 192460366 AAAAATAGT----TAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11105871 13 - 17224310 AAAAATAGT----TAGA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418058 13 - 41321030 AAAAATAGT----TAGA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489520 13 - 101219884 AAAAATAGT----TAGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875498 13 - 924385 AAAAATAGT----TAGA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716500 13 - 10587913 AAAAATAGT----TAGA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46051700 13 - 98464013 AAGAATGGT----TAGA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723298 13 + 27742158 AAGAATGGT----TAGA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 260726 13 - 4835464 AAGAATGGT----TAGA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719629 13 + 4093027 AAAAATGGT----TAGA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1611660 13 - 9149476 AGGAATAGT----TAGA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 592917 13 + 2414909 AGGAATAGT----TAGA i proCoq1.NW_012148064v1 C 0 I 867 s otoGar3.GL873534 11059929 13 + 30473821 CAGAGTTAT----TAGA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16597761 13 + 58134056 AGGAATGGT----TAGC i canFam3.chr20 C 0 I 4 s dasNov3.JH563077 1816811 17 - 2187301 AAACATAGTAATGCAGA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1375519 378 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229766 378 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I a score=2300258.000000 s hg38.chrUn_KI270749v1 106961 209 + 158759 AAATAGAATGCCTGTTGTTCAGAAG---AAA--AAAAGATCAATATCTACCATACTATTAATAAATACAAATGTTAGC----CTGT-------------------CATGACTTGTTCTAATGAATGCCTAACCTCATTC-AATATATGAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTATTTTTTCAGAGGCAAGCATTTG-TTGATAATATGCTAAACTTAGTT s panTro5.chr3 201994173 209 - 202621043 AAATAGAACGCCTGTTGTTCAGAAG---AAA--AAAAGATCAATATCTACCATACTATTAATAAATACAAATGTTAGC----CTGT-------------------CATGACTTGTTCTAATGAATGCCTAACCTCATCC-AATATATGAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTATTTTTTCAGAGGCAAGCATTTG-TTGATAATATGCTAAACTTAGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762212 209 - 205426864 AAATAGAACGCCTGTTGTTCAGAAG---AAA--AAAAGATCAATATCTACCATACTATTAATAAATACAAATGTTAGC----CTGT-------------------CATGACTTGTTCTAATGAATGCCTAACCTCATCC-AATATATGAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTATTTTTTCAGAGGCAAGCATTTG-TTGATAATATGCTAAACTTAGTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579028 209 + 86207423 AAATAGAATGCCTGTTGTTCAGAAG---AAA--AAAAGATCAATATCTACTGTACTATTAATAAATACAAATGTTAGC----CTGT-------------------CATGACTTGTTCTAATGAATGCCTAACCTCATTC-AATATATGAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTATTTTTTCAGAGGTAAGCATTTG-TTGATAATATGCTAAACTCAGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062074 208 + 204787373 AAATAGAATGCCTGTTGTTCAGGAG---AAA--AAAAGATCAATATCTACTATACTATTAATAAATACAAATTTTAGC----CTGT-------------------CATAACTTGTTCTAATGAATGCCTAACCTCATTC-AATATACGAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTA-TTTTTCAGAGGTAAGCATTTG-TTGATAATATCCTAAACTTAGTT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60993919 208 - 192460366 AAATAGAATGCCTGTTGTTCAGGAG---AAA--AAAAGATCAATATCTACTATACTATTAATAAATACAAATTTTAGC----CTGT-------------------CATAACTTGTTCTAATGAATGCCTAACCTCATTC-AATATACGAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTA-TTTTTCAGAGGTAAGCATTTG-TTGATAATATCCTAAACTTAGTT i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11105884 208 - 17224310 AAATAGAATGCCTGTTGTTCAGGAG---AAA--AAAAGATCAATATCTACTATACTATTAATAAATACAAATTTTAGC----CTGT-------------------CATAACTTGTTCTAATGAATGCCTAACCTCATTC-AATATACGAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTA-TTTTTCAGAGGTAAGCATTTG-TTGATAATATCCTAAACTTAGTT i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17418071 209 - 41321030 AAATAGAATGCCTGTTGTTCAGGAG--AAAA--AAAAGATCAATATCTACTATATTATTAATAAATACAAATTTTAGC----CTGT-------------------CATAACTTGTTCTAATGAATGCCTAACCTCATTC-AATATACGAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTA-TTTTTCAGAGGTAAGCATTTG-TTGATAATATCCTAAACTTAGTT i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64489533 208 - 101219884 AAATAGAATGCCTGTTGTTCAGAAG---AAA--AAAAGATCAATATCTACTATACTATTAATAAATACAAATGTTAGC----CTGT-------------------CATAACTTGTTCTAATGAATGCCTAACCTCATTC-AATATATGAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTA-TTTTTCAGAGGTAAGCATTTG-TTGATAATATCCTAAACTTAGTT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 875511 208 - 924385 AAATAGAATGCCTGTTGTTCAGGAG---AAA--AAAAGATCAATATCTACTATACTATTAATAAATACAAATTTTAGC----CTGT-------------------CATAACTTGTTCTAATGAATGCCTAACCTCATTC-AATATACGAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTA-TTTTTCAGAGGTAAGCATTTG-TTGATAATATCCTAAACTTAGTT i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6716513 208 - 10587913 AAATAGAATACCTGTTGTTCAGAAG---AAA--AAAGAATCAATATCTACTATACTATTAATAAATACAAATGTTAGC----CTGT-------------------CATAACTTATTCTAACGAATGCCTAACCTCATTC-AATATATGAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTA-TTTTTCAGAGGTAAACATTTG-TTGGTAATATCCAAAACTTAGTT i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46051713 209 - 98464013 AAATAGAATGCCTGTTGTTCAGAAG----AA--AAAAAATCAGTATCTACTATACTATTAATAAATACAAATGTTAGC----CTGT-------------------CATGATGTGTTCTAATGAATACCCAATCTCATTC-AATATATAAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTATTTTTTCAGAGATAAGCATTTGTTTGATAATATGCTAAACTTAGTT i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27723311 210 + 27742158 AAATAGAATGCCTATTGTTGAGAAG---AAA--AAAAAATCACTATCTACTATACTATTAATAAATACAAATGTTAGC----CTGT-------------------CATGACGTGTTCTAATGAATACAAAATATCATTC-AATATATAAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTATTTTTTCGGAGATAAGCATTTGTTTGATAATATGCTAAACTTAGTT i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 260739 210 - 4835464 AAATAGAATGCCTGTTTTTCAGAAG---AAA--AAAACATCAATATCTACTATACTATTAATAAACACAAATGTTAGC----CTGT-------------------CATGACGTGTTCTGATGAATACCCAACCTCATTC-AATATATAAAATTAAATGGGATAAAGACTCATTAATACAAGAA--GTGATTAGTTTTTTTTCAGAGATAAGCATTTGTTTGATAATATGTTAAACTTTGTT i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3719642 209 + 4093027 AAATAGAATGCCTGTTGTTCAGAAG----AA--AAAAAACCAATATCTACTATATTATTAATAAATACAAATGTTAGC----CTGT-------------------CATGACGTGTTCTAATGAATACCCAACCTTATTC-AATATATAAAATTAAATTGGATAAAGTCTCATTAATACAAGAA--GTGATTAGTATTTTTTCAGAGATAAACAATTGTTTGATAATATGCTAAACTTAGTT i aotNan1.NW_018502033v1 C 0 I 1 s micMur3.chr32 1611673 218 - 9149476 GGATAAAACTCTGGTTGTTCAAAAG---AAAATAAAGGGTAAATATCCACTATACTATTAATAAACAAAAATGTTAGTGAGCCTGC-------------------CATGACTTGTTCTAATGAATACCTGACCTCATTC-AATATATAAAATGAAATTGGATAATAACTCATTAATCCAAAAAAAATGACTAGTTTTCTTCCAGAGGTAAACACTGGTTTGATAATATTCTAAAGTTAGGT i micMur3.chr32 C 0 I 83 s otoGar3.GL873534 11059942 155 + 30473821 GGACAAATTCTGTTTTATTTAAA----------AAATAGTAAAAATCCACCATACTATTAATAAATGAAAATGTTAGT----CTGC-------------------TATGACTGGCTCTAATGAATATCAAACTTCATTC-AATATATGAAATAAATTTGGATAATATCTCATCAGTGCAAAAA-----------------------GTGAAT----------------------------- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16597778 196 + 58134056 GGATAGAATGAGAGTTATTAAAA-----AAA--AAATTGTGAATATCCAC--TACTATCAATATATAAAAATGTTAGC----CTGC-------------------AAGGACTTATTCTAATGGATACCTAATCTCACTC-AACATACCAAATGAAACTGGGTAATACCTCACTAATATAAGAA--ATAATCAGTGTTGCTGCAGAGGTAAATATTTCTTTGATGGTGTGCT---------- i canFam3.chr20 I 4 C 0 s dasNov3.JH563077 1816828 230 - 2187301 GGACAGAATGCTGGTTGTACAAAAGGGAAAA--GAACGGCAAATATCCAGTACAATATCAATAAATAAAAATGTTAAT----TTATTGATAAAGTGTTAATTTCCCATGACTTGTTCTCATGGATAACTAACCTCATTCTGATATACAAAATGACATTTGGTAAGATCTCATTAGTATAAGAA--ATGACTAGGGCTGTTTCAATAGTAAACATATGCATGATAGTCTGCTGCAGTTA--- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 17189 5258 + 635616 I e eulMac1.LGHX01000499v1 18035 4276 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1375519 378 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229766 378 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I a score=710489.000000 s hg38.chrUn_KI270749v1 107170 87 + 158759 TGATTCTAG---GA----------GGGGAGCCTCTATG--TTGTATTTCCTATTCTTTGTAACAATGAACTAAATAA--------ACAAAACTCTATT----TCAAATCAATAG s panTro5.chr3 201994382 87 - 202621043 TGATTCTAG---GA----------GGGGAGCCTCTATG--TTGTGTTTCCTATTCTTTGTAACAATGAAATAAATAA--------ACAAAACTCTATT----TCAAATCAATAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762421 87 - 205426864 TGATTCTAG---GA----------GGGGAGCCTCTATG--TTGTGTTTCCTATTCTTTGTAACAATGAAATAAATAA--------ACAAAATTCTATT----TCAAATCAATAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579237 79 + 86207423 TGATTCTAG---GA----------GGGGAGCCTCTATG--TTGTATTTCCTATTCTTTGTAACAATGAAATAAATAA--------ACAAAACTCTAGT----TC--------AG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062283 79 + 204787373 TGATTCTAG---GA----------GGGGAGCCTCTGTG--TTGTATTTCCTATTCTTTGTAACAATGAAATAAATAA--------ACAAAACTCGATT----TC--------AG i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60994128 79 - 192460366 TGATTCTAG---GA----------GGGGAGCCTCTGTG--TTGTATTTCCTATTCTTTGTAACAATGAAATAAATAA--------ACAAAACTCGATT----TC--------AG i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11106093 79 - 17224310 TGATTCTAG---GA----------GGGGAGCCTCTGTG--TTGTATTTCCTATTCTTTGTAACAATGAAATAAATAA--------ACAAAACTCGATT----TC--------AG i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17418281 79 - 41321030 TGATTCTAG---GA----------GGGGAGCCTCTGTG--TTGTATTTCCTATTCTTTGTAACAATGAAATAAATAA--------ATAAAACTCGATT----TC--------AG i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64489742 79 - 101219884 TGATTCTAG---GA----------GGAGAGCCTCTGTG--TTGTATTTCCTATTCTTTGTGACAATGAAATAAATAA--------ACAAAACTCGATT----TC--------AG i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 875720 79 - 924385 TGATTCTAG---GA----------GGGGAGCCTCTGTG--TTGTATTTCTTATTCTTTGTAACAATGAAATAAATAA--------ACAAAACTCGATT----TC--------AG i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6716722 79 - 10587913 TGATTTGAG---GA----------GGAGAGCCTCTGTG--TTGTATTTCCTATTCTTTGTAACAATGAAATAAATAA--------ACAAAACTCGATT----TC--------AG i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46051923 81 - 98464013 TAATTCTAG---GA----------GAAGACCCTCTGTGTTATATATTTCTTATTCTTTGTAACAATGAAATGAATAA--------ACAAAACTCCATT----TG--------AG i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27723522 79 + 27742158 TAATTCTAG---GA----------GGGTAGCCTCTGTG--GTACATTTCCTATTCGTTGTAACAATGAAATGAATAA--------ACAAAACTCCATT----TG--------AG i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 260950 79 - 4835464 TAATTCTAC---AA----------AGGGAGCCTCTGTG--TTACATTTCCTATTCTTTGTAACAATGAAATGAATAA--------ACAAAACTCCATT----TG--------AG i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3719852 79 + 4093027 TAATTCTAG---CA----------GGGGAGCCTCTGTG--TTATATTTCCTATTCTTGGTAACAATGAAATGAATAA--------ACAAAACTCCTTT----TA--------AG i aotNan1.NW_018502033v1 I 1 C 0 s eulMac1.LGHX01000499v1 22311 78 + 631505 TGGTTTTAGACTGA----------GGGGAACCTGCATG--TTATATTCCCTAGGTTTTGTAGCAATGAAATGAATCA--------ATGGAACTTTACA---------------- i eulMac1.LGHX01000499v1 I 4276 C 0 s eulFla1.LGHW01000501v1 22447 78 + 635616 TGGTTTTAGACTGA----------GGGGAACCTGCATG--TTATATTCCCTAGGTTTTGTAGCAATGAAATGAATCA--------ATGGAACTTTACA---------------- i eulFla1.LGHW01000501v1 I 5258 C 0 s otoGar3.GL873534 11060097 33 + 30473821 -------------------------------------------------------------GCAAAGAAATGAATCC--------ATGGAACTTTATTTCCA------------ i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16597974 70 + 58134056 ------------GA----------AGGGAACCTCTGTA--TTTTATTTCCAGCCTTTTGCGACAATCAAATGAACAA--------ACAGGACCTTATT----TG--------AA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1817058 85 - 2187301 TAACTGCAG---AAAAAAGGGGTGGGGGGTCTTCTGTT--TTATACCTTCTGGCCTTCATAAAAATCAAATGAATGGGACTTTGCACATA------------------------ i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1611891 83 - 9149476 I e rhiRox1.KN296641v1 1375519 378 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229766 378 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I a score=1094296.000000 s hg38.chrUn_KI270749v1 107257 76 + 158759 TAATGCCAAATCAAACTGCGTAGTCTCCAGATTGGGATGCATACAAAAATGATCTGCTGTGGtagaaat--------------------------aatttat s panTro5.chr3 201994469 76 - 202621043 TAATACCAAATCAAACTGCGAAgtctccagattgggatgcatacaaaaatgatctgctgtggcagaaat--------------------------aatttat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762508 76 - 205426864 TAATGCCAAATCAAACTGCGAAgtctccagattgggatgcatacaaaaatgatctgctgtggcagaaat--------------------------aatttat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579316 76 + 86207423 TAATGCCAAATCAAACTGTgtagtctccagattgggatgcatacaaaaatgatctgctgtggtagaaat--------------------------aatttat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062362 76 + 204787373 TAGTGCCAAATCAAACTGTGTAGTCTCCAAATTGGGATGCATACAAAAATGATCTGCTGTGGTAGAAAT--------------------------AATTTAT i rheMac8.chr2 C 0 I 4 s macFas5.chr2 60994207 76 - 192460366 TAGTGCCAAATCAAACTGTGTAGTCTCCAAATTGGGATGCATACAAAAATGATCTGCTGTGGTAGAAAT--------------------------AATTTAT i macFas5.chr2 C 0 I 3 s macNem1.NW_012018021v1 11106172 76 - 17224310 TAGTGCCAAATCAAACTGTGTAGTCTCCAAATTGGGATGCATACAAAAATGATCTGCTGTGGTAGAAAT--------------------------AATTTAT i macNem1.NW_012018021v1 C 0 I 4 s cerAty1.NW_012009469v1 17418360 76 - 41321030 TAGTGCCAAATCAAACTGTGTAGTCTCCAAATTGGGATGCATACAAAAATGATCTGCTGTGGTAGAAAT--------------------------AATTTAT i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64489821 76 - 101219884 TAGTGCCAAATCAAACTGTGTAGTCTCCAAATTGGGATGCATACAAAAATGATCTGCTGTGGTAGAAAT--------------------------AATTTAT i chlSab2.chr22 C 0 I 2 s manLeu1.NW_012098965v1 875799 76 - 924385 TAGTGCCAAATCAAACTGTGTAGTCTCCAAATTGGGATGCATACAAAAATGATCTGCTGTGGTAGAAAT--------------------------AATTTAT i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6716801 76 - 10587913 TAATGCCAAATCAAACTGTGTAGTCTCCAAATTGGGATGCATACAAAAATGATCTGCTGCGGTAGAAAT--------------------------AACTTAT i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46052004 76 - 98464013 TAATGCCAAATCAAACTCTGTAGTATCCAAATTGGGATGCATACAAAAATGATCTGCTATGGTAGAAAT--------------------------AACTCAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723601 76 + 27742158 TAATGCCAAATCAAACTCTGTAGTATCCAAATTGGGATTCATACAAAAATCATCTGCTGTGGtagaaat--------------------------aactcat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261029 74 - 4835464 TAATGCCAAATCAAACTCTGTAGTATCCAAATTGGGATGCATACAAGAATGATCTGCTGTGGTAGAAAT--------------------------GACTC-- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719931 76 + 4093027 TAATGCCAAATCAAACTCTGTAGTATCCAAATTGGGATGCATACAAAAATGATCTGCTCTGGTAGAAAT--------------------------AACTCAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1611974 76 - 9149476 TAATGCCAAATCAAATTCTGTGGTCTCTAAATTGGGATGCATACAAAAATGATCCACTGTGGTAGAAAT--------------------------CACTTCT i micMur3.chr32 I 83 C 0 s eulMac1.LGHX01000499v1 22389 76 + 631505 TAATGCCAGATCAAATTCTgtggtctctaaactgggatgcatacaaaaatgatccactgtggtagaaat--------------------------cacttct i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 22525 76 + 635616 TAATGCCAGATCAAATTCTgtggtctctaaactgggatgcatacaaaaatgatccactgtggtagaaat--------------------------cacttct i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11060130 76 + 30473821 TAATTCCAGATCAAATTCTATTGTCTCCAAATTGGGATGTAAACAAAAATGATCCACTCTGGTGGAAAT--------------------------CTCTTAT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598044 100 + 58134056 TAATACCAGATAAAACTCAGT-GTCTCTAAA-TGTGATACACATGaagatgatccacaggcgtggaaattccatattaaaaattctgtttatatctatttat i canFam3.chr20 C 0 I 5 s dasNov3.JH563077 1817143 72 - 2187301 ----GCTGGATCAAACACAGTGGTCTCCAAATTGAGATGGACATAAAATGGATCTACTAAAGTGGAAAT--------------------------TTAATAT i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1375519 378 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1229766 378 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I a score=3250.000000 s hg38.chrUn_KI270749v1 107333 1 + 158759 t s panTro5.chr3 201994545 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762584 1 - 205426864 t i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579392 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s colAng1.NW_012114711v1 6716878 1 - 10587913 C i colAng1.NW_012114711v1 I 1 C 0 s rhiRox1.KN296641v1 1375897 1 - 1467263 C i rhiRox1.KN296641v1 I 378 I 79 s rhiBie1.NW_016820128v1 1230144 1 - 2311269 C i rhiBie1.NW_016820128v1 I 378 I 81 s calJac3.chr15 46052080 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723677 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261103 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720007 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612050 1 - 9149476 G i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 22465 1 + 631505 t i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 22601 1 + 635616 t i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11060206 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598149 1 + 58134056 c i canFam3.chr20 I 5 C 0 s dasNov3.JH563077 1817215 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e tarSyr2.KE939134v1 171907 2391 + 958716 I e manLeu1.NW_012098965v1 875875 3 - 924385 I e macNem1.NW_012018021v1 11106248 4 - 17224310 I e rheMac8.chr2 66062438 4 + 204787373 I e chlSab2.chr22 64489897 2 - 101219884 I e cerAty1.NW_012009469v1 17418436 3 - 41321030 I e macFas5.chr2 60994283 3 - 192460366 I a score=459561.000000 s hg38.chrUn_KI270749v1 107334 32 + 158759 aaaaattctgtttacatttatcttatctcatc-- s panTro5.chr3 201994546 32 - 202621043 aaaaattctgtttacatttatcttATCTCATC-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762585 32 - 205426864 aaaaattctgtttacatttatcttATCTCATC-- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579393 32 + 86207423 aaaaattctgtttacatttatcttatctcatc-- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062442 32 + 204787373 AAAAAATCTGTTTACATTTATCTTATCTCATC-- i rheMac8.chr2 I 4 C 0 s macFas5.chr2 60994286 32 - 192460366 AAAAAATCTGTTTACATTTATCTTATCTCATC-- i macFas5.chr2 I 3 C 0 s macNem1.NW_012018021v1 11106252 32 - 17224310 AAAAAATCTGTTTACATTTATCTTATCTCATC-- i macNem1.NW_012018021v1 I 4 C 0 s cerAty1.NW_012009469v1 17418439 32 - 41321030 AAAAAATCTGTTTACATTTATCTTATCTCATC-- i cerAty1.NW_012009469v1 I 3 C 0 s chlSab2.chr22 64489899 32 - 101219884 AAAAAGTCTGTTTACATTTATCTTATCTCATC-- i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 875878 32 - 924385 AAAAAATCTGTTTACATTTATCTTATCTCATC-- i manLeu1.NW_012098965v1 I 3 C 0 s colAng1.NW_012114711v1 6716879 32 - 10587913 AAAAAATCTGtttacttttatctcatctcatc-- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052081 32 - 98464013 Aaaaattctgtttacatttatcttatctcatc-- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723678 32 + 27742158 aaaagttctgtttacatttatcttatctcatc-- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261104 32 - 4835464 AAAAGATCTGTTTACATTTATCTTATGTCATC-- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720008 32 + 4093027 Aaaaattctgtttccatttatcttatctcatc-- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612051 32 - 9149476 GAAAATTCTGTTTATATCTATTTTATCTCATC-- i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 22466 32 + 631505 aaaaattctgtttatacctattttatctcatc-- i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 22602 32 + 635616 aaaaattctgtttatacctattttatctcatc-- i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11060207 32 + 30473821 AAAAATTCTGTTTATATCTATTTTATCTCATC-- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598150 29 + 58134056 aaatgttttgtatatattt---ttaatttgca-- i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1817216 34 - 2187301 AGAAAGTTTGTGAAAATCTATATTATCACATGTA i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1375898 79 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1230145 81 - 2311269 I e tarSyr2.KE939134v1 171907 2391 + 958716 I a score=12521.000000 s hg38.chrUn_KI270749v1 107366 1 + 158759 a s panTro5.chr3 201994578 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762617 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579425 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062474 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994318 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106284 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418471 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489931 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875910 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716911 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052113 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723710 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261136 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720040 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 174298 1 + 958716 A i tarSyr2.KE939134v1 I 2391 I 53 s micMur3.chr32 1612083 1 - 9149476 A i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 22498 1 + 631505 a i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 22634 1 + 635616 a i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11060239 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1817250 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1375898 79 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1230145 81 - 2311269 I e canFam3.chr20 16598179 1 + 58134056 I a score=391187.000000 s hg38.chrUn_KI270749v1 107367 45 + 158759 attttagtag-------gtattttt----------acatta-----------tatattagaa-----------aaattgtgtac s panTro5.chr3 201994579 45 - 202621043 ATTTTAGTAG-------GTATTTTT----------AAATTA-----------TATATTAGAA-----------AAACTGTGTAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762618 45 - 205426864 ATTTTAGTAG-------GTATTTTT----------AAATTA-----------TATATTAGAA-----------AAACTGTGTAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579426 45 + 86207423 attttagtag-------gtattttt----------aaatta-----------tatattagaa-----------aaattgtgtac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062475 45 + 204787373 ATTTTAGTAG-------GTATTTTT----------AAATCA-----------TATATTAGAA-----------AAATTGTGTAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994319 45 - 192460366 ATTTTAGTAG-------GTATTTTT----------AAATTA-----------TATATTAGAA-----------AAATTGTGTAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106285 45 - 17224310 ATTTTAGTAG-------GTATTTTT----------AAATTA-----------TATATTAGAA-----------AAATTGTGTAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418472 45 - 41321030 ATTTTAGTAG-------GTATTTTT----------AAATTA-----------TATATTAGAA-----------AAATTGTGTAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489932 45 - 101219884 ATTTTAGTAA-------GTATTTTA----------AAATTA-----------TATATTAGAA-----------AAATTGTGTAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875911 45 - 924385 ATTTTAGTAG-------GTATTTTT----------AAATTA-----------TATATTAGAA-----------AAATTATGTAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716912 45 - 10587913 attttagtag-------gtattttt----------aaatta-----------tatattagaa-----------aaattgtatac i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052114 49 - 98464013 attttactag-------gtatttt-----------aaactgta------cattatattagaa-----------aaattgtgtac i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723711 48 + 27742158 attttattag-------gtatttt-----------aaattgta------cattatagtagaa-----------aaa-tgtatat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261137 49 - 4835464 ATTTTACTAG-------GTATTTT-----------AAATCGTA------CATTATATTAGAA-----------AAATTGTGCAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720041 49 + 4093027 attttactag-------gtatttt-----------aaattgta------cattatgttagaa-----------aaattgtgtac i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612084 49 - 9149476 AATATACTAG-------GTATTTT-----------TAATTGCC------TATTATATTGCAA-----------AATTAGTATAC i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 22499 49 + 631505 aatatactag-------gtatttt-----------taattgtc------tattatattggaa-----------aattagtatac i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 22635 49 + 635616 aatatactag-------gtatttt-----------taattgtc------tattatattggaa-----------aattagtatac i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11060240 48 + 30473821 AATTTGGTAG-------GTA-CAT-----------TAATTGCA------TATTATATTGGAA-----------AAACAGTAAAC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598180 77 + 58134056 attatattggaaaaatagtatccat-----atatatcattataaacaagtacagtattagagttcacatgctcaaattttgt-- i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1817251 55 - 2187301 TTTTTAATAT-------GTATTTTGTATTTTTTTAAAACTA-----------CATAGTAGAA-----------CAAAAGTCTAC i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1375898 79 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57723051 2409 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1230145 81 - 2311269 I e tarSyr2.KE939134v1 174299 53 + 958716 I a score=18558.000000 s hg38.chrUn_KI270749v1 107412 2 + 158759 at s panTro5.chr3 201994624 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762663 2 - 205426864 AT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579471 2 + 86207423 at i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062520 2 + 204787373 CT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994364 2 - 192460366 CT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106330 2 - 17224310 CT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418517 2 - 41321030 CT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489977 2 - 101219884 Ct i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875956 2 - 924385 Ct i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57725460 2 + 181502896 CT i nasLar1.chr2 I 2409 C 0 s colAng1.NW_012114711v1 6716957 2 - 10587913 tt i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1375977 2 - 1467263 CT i rhiRox1.KN296641v1 I 79 C 0 s calJac3.chr15 46052163 2 - 98464013 at i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723759 2 + 27742158 at i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261186 2 - 4835464 AT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720090 2 + 4093027 at i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612133 2 - 9149476 AT i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 22548 2 + 631505 at i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 22684 2 + 635616 at i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11060288 2 + 30473821 AT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598257 1 + 58134056 -t i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1817306 2 - 2187301 AT i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e papAnu3.chr2 59551573 2415 + 187378091 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1230145 81 - 2311269 I e tarSyr2.KE939134v1 174299 53 + 958716 I a score=40931.000000 s hg38.chrUn_KI270749v1 107414 2 + 158759 at s panTro5.chr3 201994626 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s nomLeu3.chr21 67579473 2 + 86207423 at i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062522 2 + 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994366 2 - 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106332 2 - 17224310 AT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418519 2 - 41321030 AT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489979 2 - 101219884 at i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875958 2 - 924385 at i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57725462 2 + 181502896 AT i nasLar1.chr2 C 0 I 192 s colAng1.NW_012114711v1 6716959 2 - 10587913 at i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1375979 2 - 1467263 AT i rhiRox1.KN296641v1 C 0 I 170 s rhiBie1.NW_016820128v1 1230226 2 - 2311269 AT i rhiBie1.NW_016820128v1 I 81 C 0 s calJac3.chr15 46052165 2 - 98464013 at i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723761 2 + 27742158 at i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261188 2 - 4835464 AT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720092 2 + 4093027 at i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612135 2 - 9149476 AT i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 22550 2 + 631505 at i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 22686 2 + 635616 at i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11060290 2 + 30473821 AC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598258 2 + 58134056 ac i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1817308 2 - 2187301 AT i dasNov3.JH563077 C 0 I 8 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e papAnu3.chr2 59551573 2415 + 187378091 I e ponAbe2.chr3 69649460 2333 + 202140232 I e tarSyr2.KE939134v1 174299 53 + 958716 I e panPan2.chr3 204762665 0 - 205426864 C a score=12376.000000 s hg38.chrUn_KI270749v1 107416 1 + 158759 a s panTro5.chr3 201994628 1 - 202621043 A i panTro5.chr3 C 0 C 0 s nomLeu3.chr21 67579475 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062524 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994368 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106334 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418521 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489981 1 - 101219884 a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875960 1 - 924385 a i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716961 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1230228 1 - 2311269 A i rhiBie1.NW_016820128v1 C 0 C 0 s calJac3.chr15 46052167 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723763 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261190 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720094 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612137 1 - 9149476 A i micMur3.chr32 C 0 C 0 s dasNov3.JH563077 1817318 1 - 2187301 A i dasNov3.JH563077 I 8 C 0 e eulFla1.LGHW01000501v1 22688 0 + 635616 C e eulMac1.LGHX01000499v1 22552 0 + 631505 C e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1375981 170 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57725464 192 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e tarSyr2.KE939134v1 174299 53 + 958716 I e otoGar3.GL873534 11060292 0 + 30473821 C e canFam3.chr20 16598260 1 + 58134056 I e panPan2.chr3 204762665 0 - 205426864 C a score=15561.000000 s hg38.chrUn_KI270749v1 107417 1 + 158759 a s panTro5.chr3 201994629 1 - 202621043 A i panTro5.chr3 C 0 C 0 s nomLeu3.chr21 67579476 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062525 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994369 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106335 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418522 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489982 1 - 101219884 a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875961 1 - 924385 a i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716962 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1230229 1 - 2311269 A i rhiBie1.NW_016820128v1 C 0 I 168 s calJac3.chr15 46052168 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723764 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261191 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720095 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 174352 1 + 958716 A i tarSyr2.KE939134v1 I 53 C 0 s micMur3.chr32 1612138 1 - 9149476 A i micMur3.chr32 C 0 C 0 s canFam3.chr20 16598261 1 + 58134056 a i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1817319 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22688 0 + 635616 C e eulMac1.LGHX01000499v1 22552 0 + 631505 C e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1375981 170 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57725464 192 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e otoGar3.GL873534 11060292 0 + 30473821 C e panPan2.chr3 204762665 0 - 205426864 C a score=21021.000000 s hg38.chrUn_KI270749v1 107418 1 + 158759 a s panTro5.chr3 201994630 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762665 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579477 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062526 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994370 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106336 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418523 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489983 1 - 101219884 a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875962 1 - 924385 a i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716963 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052169 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723765 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261192 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720096 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 174353 1 + 958716 A i tarSyr2.KE939134v1 C 0 C 0 s micMur3.chr32 1612139 1 - 9149476 A i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 22552 1 + 631505 a i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 22688 1 + 635616 a i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11060292 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598262 1 + 58134056 a i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1817320 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1375981 170 - 1467263 I e papAnu3.chr2 59551573 2415 + 187378091 I e nasLar1.chr2 57725464 192 + 181502896 I e ponAbe2.chr3 69649460 2333 + 202140232 I e rhiBie1.NW_016820128v1 1230230 168 - 2311269 I a score=50729.000000 s hg38.chrUn_KI270749v1 107419 4 + 158759 taaa s panTro5.chr3 201994631 4 - 202621043 TAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762666 4 - 205426864 TAAA i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69651793 4 + 202140232 taaa i ponAbe2.chr3 I 2333 I 182 s nomLeu3.chr21 67579478 4 + 86207423 taaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062527 4 + 204787373 TAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994371 4 - 192460366 TAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106337 4 - 17224310 TAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418524 4 - 41321030 TAAA i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59553988 4 + 187378091 taaa i papAnu3.chr2 I 2415 I 185 s chlSab2.chr22 64489984 4 - 101219884 taaa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875963 4 - 924385 taaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716964 4 - 10587913 taaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052170 1 - 98464013 c--- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723766 1 + 27742158 t--- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261193 4 - 4835464 TAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720097 4 + 4093027 taaa i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 174354 4 + 958716 TAAC i tarSyr2.KE939134v1 C 0 I 190 s micMur3.chr32 1612140 4 - 9149476 TAAA i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 22553 4 + 631505 taaa i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 22689 4 + 635616 taaa i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11060293 4 + 30473821 TAAC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598263 4 + 58134056 caag i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1817321 4 - 2187301 TAAA i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1375981 170 - 1467263 I e nasLar1.chr2 57725464 192 + 181502896 I e rhiBie1.NW_016820128v1 1230230 168 - 2311269 I a score=352081.000000 s hg38.chrUn_KI270749v1 107423 29 + 158759 caaatatagtactgaagttt---------------acttgctc-a s panTro5.chr3 201994635 29 - 202621043 CAAATATAGTACTGAAGTTT---------------ACTTGCTC-A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762670 29 - 205426864 CAAATATAGTACTGAAGTTT---------------ACTTGCTC-A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579482 29 + 86207423 caaatatagtactgaagttt---------------acttgctc-a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062531 29 + 204787373 CAAATATAGTACTGAAGTTT---------------ACTTGTTC-A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994375 29 - 192460366 CAAATATAGTACTGAAGTTT---------------ACTTGTTC-A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106341 29 - 17224310 CAAATATAGTACTGAAGTTT---------------ACTTGTTC-A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418528 29 - 41321030 CAAATATAGTACTGAAGTTT---------------ACTTGTTC-A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489988 29 - 101219884 caaatatagtactgaagttt---------------acttgctc-a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875967 29 - 924385 caaatatagtactgaagttt---------------acttgttc-a i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716968 29 - 10587913 caaatatagtactgaagttt---------------acttgctc-a i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052171 28 - 98464013 -atatatagtactgaa-ttt---------------acttactcaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723767 29 + 27742158 -atatatagtactgaagttt---------------acttactcaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261197 30 - 4835464 GATACATAGTACTGAAGTTT---------------ACTTACTCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720101 30 + 4093027 catataaaatactgaagttt---------------acttactcaa i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612144 29 - 9149476 CAAATGTAGTGTTAAAGTTT---------------ACTTGCTC-A i micMur3.chr32 C 0 I 148 s eulMac1.LGHX01000499v1 22557 29 + 631505 taaatatagtattaaagttt---------------acttgctc-a i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 22693 29 + 635616 taaatatagtattaaagttt---------------acttgctc-a i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11060297 29 + 30473821 TAAATACAGTATTAAAGTTT---------------ACTTGTTC-A i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598267 42 + 58134056 --gatatatcataacagttttggaaaccattgACAAATTACTC-A i canFam3.chr20 C 0 I 27 s dasNov3.JH563077 1817325 19 - 2187301 -TAATATGGTATTGAATTTT------------------------- i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1375981 170 - 1467263 I e papAnu3.chr2 59553992 185 + 187378091 I e nasLar1.chr2 57725464 192 + 181502896 I e ponAbe2.chr3 69651797 182 + 202140232 I e rhiBie1.NW_016820128v1 1230230 168 - 2311269 I e tarSyr2.KE939134v1 174358 190 + 958716 I a score=519698.000000 s hg38.chrUn_KI270749v1 107452 54 + 158759 aatattattacttatagagatgtg--------------------catccaaaaatgttt-agaaa-----------ctactgACAA s panTro5.chr3 201994664 54 - 202621043 AATATTATTGCTTATAGAGATGTC--------------------CATCCAAAAATGTTT-AGAAA-----------CTACTGACAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762699 54 - 205426864 AATATTATTGCTTATAGAGATGTC--------------------CATCCAAAAATGTTT-AGAAA-----------CTACTGACAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579511 54 + 86207423 aatattattacttatagagatgtg--------------------catccaaaaatgttt-agaaa-----------ctactgACAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062560 53 + 204787373 AATGTTATTACTTATAGAGATGTG--------------------CATCC-AAAATGTTT-AGAAA-----------CTACTTCCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994404 53 - 192460366 AATGTTATTACTTATAGAGATGTG--------------------CATCC-AAAATGTTT-AGAAA-----------CTACTTCCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106370 53 - 17224310 AATGTTATTACTTATAGAGATGTG--------------------CATCC-AAAATGTTT-AGAAA-----------CTACTTCCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418557 53 - 41321030 AATGTTATTACTTATAGACATGTG--------------------CATCC-AAAATGTTT-AGAAA-----------CTACTTCCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490017 53 - 101219884 aatgttattacttatagagatgtg--------------------catcc-aaaatgttt-agaaa-----------ctactTCCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875996 53 - 924385 aatgttattacttatagggatatg--------------------catcc-aaaatgttt-agaaa-----------ctactTCCAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716997 53 - 10587913 aatgttattacttatagagatgtg--------------------tatcc-aaaatgttt-agaaa-----------ctactTCCAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052199 54 - 98464013 aatgttattacttatagacatgtg--------------------catttaaaaatgctt-agaaa-----------ctacCAACAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723796 54 + 27742158 aatgttattacttctagagatgtg--------------------catttaaaaatgttt-agaaa-----------ctactgACAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261227 54 - 4835464 AATGTTATTACTTATAGAGATGTA--------------------CATTTAAAAATGTTT-AGAAA-----------CTACTGACAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720131 54 + 4093027 aatgttattacttacagagatgtg--------------------catttaaaaatgttt-agaaa-----------ctactgACAA i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 22586 55 + 631505 cattttgttattaatagggatgtg--------------------caatcaaaaacattttagaaa-----------ccactgACAA i eulMac1.LGHX01000499v1 C 0 I 1041 s eulFla1.LGHW01000501v1 22722 55 + 635616 cattttgttattaatagggatgtg--------------------caatcaaaaacattttagaaa-----------ccactgACAA i eulFla1.LGHW01000501v1 C 0 I 1041 s otoGar3.GL873534 11060326 54 + 30473821 CATATT-TTACTAATAGGGATGTG--------------------TAGTCAAATACATTTGAGAAA-----------TTACGGACAA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598336 85 + 58134056 CGTAATAATCCATATAAGGTTGTAATTGAGTAGTCCTATAGCACAATCCACAATTTTAT-AGAAAAATCAGTATATCTAATTACAA i canFam3.chr20 I 27 C 0 s dasNov3.JH563077 1817344 46 - 2187301 -------TTACTAATATGGTCATA--------------------AGTCA-AAAAGCTTG-ATGAA-----------TTACTCATCT i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612173 148 - 9149476 I e rhiRox1.KN296641v1 1375981 170 - 1467263 I e papAnu3.chr2 59553992 185 + 187378091 I e nasLar1.chr2 57725464 192 + 181502896 I e ponAbe2.chr3 69651797 182 + 202140232 I e rhiBie1.NW_016820128v1 1230230 168 - 2311269 I e tarSyr2.KE939134v1 174358 190 + 958716 I a score=26583.000000 s hg38.chrUn_KI270749v1 107506 4 + 158759 -ACTA s panTro5.chr3 201994718 4 - 202621043 -ACTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762753 4 - 205426864 -ACTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579565 4 + 86207423 -ACTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062613 4 + 204787373 -ACTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994457 4 - 192460366 -ACTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106423 4 - 17224310 -ACTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418610 4 - 41321030 -ACTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490070 4 - 101219884 -ACTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876049 4 - 924385 -ACCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717050 4 - 10587913 -ACTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052253 4 - 98464013 -ACTG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723850 4 + 27742158 -ACTG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261281 4 - 4835464 -ACTG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720185 4 + 4093027 -TCTG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11060380 4 + 30473821 -ACTA i otoGar3.GL873534 C 0 I 7 s canFam3.chr20 16598421 4 + 58134056 -ATGA i canFam3.chr20 C 0 I 174 s dasNov3.JH563077 1817390 4 - 2187301 AAAT- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612173 148 - 9149476 I e rhiRox1.KN296641v1 1375981 170 - 1467263 I e papAnu3.chr2 59553992 185 + 187378091 I e nasLar1.chr2 57725464 192 + 181502896 I e ponAbe2.chr3 69651797 182 + 202140232 I e rhiBie1.NW_016820128v1 1230230 168 - 2311269 I e tarSyr2.KE939134v1 174358 190 + 958716 I a score=713568.000000 s hg38.chrUn_KI270749v1 107510 77 + 158759 TAAGT-AAAT-AACCTGTCAAAGAGTTCTCAGAATCCCT------CTAAGATTGTAAC---TGAGTATGCCTGT---AGCATAATCCTTAT s panTro5.chr3 201994722 77 - 202621043 TAAGT-AAAT-AACCTATCAAAGAGTTCTCAGAATCCCT------CTAAGATCGTAAC---TGAGTATGCCTGT---AACATAATCCTTAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762757 77 - 205426864 TAAGT-AAAT-AACCTATCAAAGAGTTCTCAGAATCCCT------CTAAGATCGTAAC---TGAGTATGCCTGT---AGCATAATCCTTAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579569 77 + 86207423 TAAGT-AAAT-AACCTGTCAAAGAGTTCTCAGAATCCCT------CTAAGATCGTAAC---TGAGTATGCCTGT---AGCATAATCCTTAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062617 77 + 204787373 TAAGT-AAAT-AACCTGTCAAAGAGTTCTCAGAATCCCT------CTAAGACTGTAAC---TGAGTATGCCTGT---AACACAATCCTTAT i rheMac8.chr2 C 0 I 4 s macFas5.chr2 60994461 77 - 192460366 TAAGT-AAAT-AACCTGTCAAAGAGTTCTCAGAGTCCCT------CTAAGACTGTAAC---TGAGTATGCCTGT---AACACAATCCTTAT i macFas5.chr2 C 0 I 4 s macNem1.NW_012018021v1 11106427 77 - 17224310 TAAGT-AAAT-AACCTGTCCAAGAGTTCTCAGAATCCCT------CTAAGACTGTAAC---TGAGTATGCCTGT---AACACAATCCTTAT i macNem1.NW_012018021v1 C 0 I 4 s cerAty1.NW_012009469v1 17418614 77 - 41321030 TAAGT-AAAT-AACCTGTCAAAGAGTTCTCAGAATCCCT------CTAAGACTGTAAC---TGAGTATGCCTGT---AAGACAATCCTTAT i cerAty1.NW_012009469v1 C 0 I 4 s chlSab2.chr22 64490074 77 - 101219884 TAAGT-AAAT-AACCTGTCAAAGAGTTCTCAGAATCCCT------CTAAGACTGTAAC---TGAGTATGCCTGT---AACACAATCCTTAT i chlSab2.chr22 C 0 I 4 s manLeu1.NW_012098965v1 876053 77 - 924385 TAAGT-AAAT-AACCTGTCAAAGAGTTCTCAGAATCCCT------CTAAGACTGTAAC---TGAGTATGCCTGT---AACACAATCCTTAT i manLeu1.NW_012098965v1 C 0 I 4 s colAng1.NW_012114711v1 6717054 77 - 10587913 CAAGT-AAAT-AACCTGTCAAAGAGTTCTCAGAATCCCT------CTAAGACTGTAAC---TGAGTATGCCTGT---AACACAATCCTTAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052257 78 - 98464013 TAAGTAAAAT-AATCCGTTGAAGAGTTCTCAGAATCCCT------CTAAGCTCATAAC---TAAGTTGGCCTAT---AGCAGAATCCTTAT i calJac3.chr15 C 0 I 4 s saiBol1.JH378125 27723854 77 + 27742158 TAGGT-AAAT-AATCTCTTGAAGAGTTCTCAGAATCCCT------GTAAGCTCATAAC---TGAGTTGGCCTAT---GGCACAATCTTGAT i saiBol1.JH378125 C 0 I 4 s cebCap1.NW_016107467v1 261285 77 - 4835464 TAAGT-AAAA-AATCTGTTGAAGAGTTCTCAGAATCCCT------CTAAGCTCATAAC---TGAGTTGGCCTAT---AGCACAATCCTTAT i cebCap1.NW_016107467v1 C 0 I 4 s aotNan1.NW_018502033v1 3720189 77 + 4093027 TAAGT-AAAT-AATCTATTGAAGAGTTCTCAGAATCCCT------CTAAGCTCATAAC---TGAGTTGGCCTAT---AGCACAATCCTTAT i aotNan1.NW_018502033v1 C 0 I 4 s otoGar3.GL873534 11060391 75 + 30473821 CAAAC-AAGC-AGATCATCTAGGAGTTCTAATAAT--CT------GCAGTATTATAAC---TGAGTAGGTGTGT---AACACAATCCCTGT i otoGar3.GL873534 I 7 C 0 s canFam3.chr20 16598599 90 + 58134056 taaat-aaataaatctttaaaaaaaaTCTGAAAGCCACTGACATAGAAAAAATATGACACTGGAGTGTACCTTCATAAACTTAAATTCAAT i canFam3.chr20 I 174 I 2 s dasNov3.JH563077 1817394 69 - 2187301 CAAGT-AAAT-AA----TCAAACAGTTGCAATAAT----------CTAAATTCATAAT---TGAGTAAATCTGT---AACACAATCCTTGT i dasNov3.JH563077 C 0 I 4 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612173 148 - 9149476 I e rhiRox1.KN296641v1 1375981 170 - 1467263 I e papAnu3.chr2 59553992 185 + 187378091 I e nasLar1.chr2 57725464 192 + 181502896 I e ponAbe2.chr3 69651797 182 + 202140232 I e rhiBie1.NW_016820128v1 1230230 168 - 2311269 I e tarSyr2.KE939134v1 174358 190 + 958716 I a score=15561.000000 s hg38.chrUn_KI270749v1 107587 1 + 158759 T s panTro5.chr3 201994799 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762834 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579646 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062698 1 + 204787373 T i rheMac8.chr2 I 4 C 0 s macFas5.chr2 60994542 1 - 192460366 T i macFas5.chr2 I 4 C 0 s macNem1.NW_012018021v1 11106508 1 - 17224310 T i macNem1.NW_012018021v1 I 4 C 0 s cerAty1.NW_012009469v1 17418695 1 - 41321030 T i cerAty1.NW_012009469v1 I 4 C 0 s chlSab2.chr22 64490155 1 - 101219884 T i chlSab2.chr22 I 4 C 0 s manLeu1.NW_012098965v1 876134 1 - 924385 T i manLeu1.NW_012098965v1 I 4 C 0 s colAng1.NW_012114711v1 6717131 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1376151 1 - 1467263 T i rhiRox1.KN296641v1 I 170 C 0 s rhiBie1.NW_016820128v1 1230398 1 - 2311269 T i rhiBie1.NW_016820128v1 I 168 C 0 s calJac3.chr15 46052339 1 - 98464013 T i calJac3.chr15 I 4 C 0 s saiBol1.JH378125 27723935 1 + 27742158 T i saiBol1.JH378125 I 4 C 0 s cebCap1.NW_016107467v1 261366 1 - 4835464 T i cebCap1.NW_016107467v1 I 4 C 0 s aotNan1.NW_018502033v1 3720270 1 + 4093027 T i aotNan1.NW_018502033v1 I 4 C 0 s otoGar3.GL873534 11060466 1 + 30473821 T i otoGar3.GL873534 C 0 I 4 s dasNov3.JH563077 1817467 1 - 2187301 T i dasNov3.JH563077 I 4 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612173 148 - 9149476 I e papAnu3.chr2 59553992 185 + 187378091 I e nasLar1.chr2 57725464 192 + 181502896 I e ponAbe2.chr3 69651797 182 + 202140232 I e tarSyr2.KE939134v1 174358 190 + 958716 I e canFam3.chr20 16598689 2 + 58134056 I a score=27800.000000 s hg38.chrUn_KI270749v1 107588 2 + 158759 AA s panTro5.chr3 201994800 2 - 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762835 2 - 205426864 AA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579647 2 + 86207423 AA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062699 2 + 204787373 AA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994543 2 - 192460366 AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106509 2 - 17224310 AA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418696 2 - 41321030 AA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490156 2 - 101219884 AA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876135 2 - 924385 AA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717132 2 - 10587913 AA i colAng1.NW_012114711v1 C 0 I 4 s rhiRox1.KN296641v1 1376152 2 - 1467263 AA i rhiRox1.KN296641v1 C 0 I 19 s rhiBie1.NW_016820128v1 1230399 2 - 2311269 AA i rhiBie1.NW_016820128v1 C 0 I 19 s calJac3.chr15 46052340 2 - 98464013 AA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723936 2 + 27742158 AA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261367 2 - 4835464 AA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720271 2 + 4093027 AA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612321 2 - 9149476 AA i micMur3.chr32 I 148 C 0 s otoGar3.GL873534 11060471 2 + 30473821 AA i otoGar3.GL873534 I 4 C 0 s canFam3.chr20 16598691 1 + 58134056 A- i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1817468 2 - 2187301 AA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e papAnu3.chr2 59553992 185 + 187378091 I e nasLar1.chr2 57725464 192 + 181502896 I e ponAbe2.chr3 69651797 182 + 202140232 I e tarSyr2.KE939134v1 174358 190 + 958716 I a score=191674.000000 s hg38.chrUn_KI270749v1 107590 15 + 158759 TTTTGCTAGAAAACT s panTro5.chr3 201994802 15 - 202621043 TTTTGCTAGAAAACT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762837 15 - 205426864 TTTTGCTAGAAAACT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579649 15 + 86207423 TTTTGCTAGAAAACT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062701 15 + 204787373 TTTTGCTAGAAAACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994545 15 - 192460366 TTTTGCTAGAAAACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106511 15 - 17224310 TTTTGCTAGAAAACT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418698 15 - 41321030 TTTTGCTAGAAAACT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490158 15 - 101219884 TTTTGCTAGAAAACT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876137 15 - 924385 TTTTGCTAGAAAACT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717138 15 - 10587913 TTTTGCTAGAAAACT i colAng1.NW_012114711v1 I 4 C 0 s calJac3.chr15 46052342 15 - 98464013 TTTTACTAGAAAACG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723938 15 + 27742158 TTTTACTAGAAAACT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261369 15 - 4835464 TTTTACTAGAAAACT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720273 15 + 4093027 TTTTACTAGAAAACT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612323 15 - 9149476 TTTTGCTAGATAATT i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11060473 15 + 30473821 TCATACTAGGAAATT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598692 15 + 58134056 TCTTTCTAAAGAATT i canFam3.chr20 C 0 I 31 s dasNov3.JH563077 1817470 15 - 2187301 TTTTACTAAAAATCT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1376154 19 - 1467263 I e papAnu3.chr2 59553992 185 + 187378091 I e nasLar1.chr2 57725464 192 + 181502896 I e ponAbe2.chr3 69651797 182 + 202140232 I e rhiBie1.NW_016820128v1 1230401 19 - 2311269 I e tarSyr2.KE939134v1 174358 190 + 958716 I a score=43615.000000 s hg38.chrUn_KI270749v1 107605 2 + 158759 CA s ponAbe2.chr3 69651979 2 + 202140232 CA i ponAbe2.chr3 I 182 I 2471 s nomLeu3.chr21 67579664 2 + 86207423 CA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062716 2 + 204787373 CA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994560 2 - 192460366 CA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106526 2 - 17224310 CA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418713 2 - 41321030 CA i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59554177 2 + 187378091 CA i papAnu3.chr2 I 185 I 1064 s chlSab2.chr22 64490173 2 - 101219884 CA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876152 2 - 924385 CA i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57725656 2 + 181502896 CA i nasLar1.chr2 I 192 I 1066 s colAng1.NW_012114711v1 6717153 2 - 10587913 CA i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1376173 2 - 1467263 CA i rhiRox1.KN296641v1 I 19 I 29 s rhiBie1.NW_016820128v1 1230420 2 - 2311269 CA i rhiBie1.NW_016820128v1 I 19 I 29 s calJac3.chr15 46052357 2 - 98464013 CA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723953 2 + 27742158 CA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261384 2 - 4835464 CA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720288 2 + 4093027 CA i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 174548 2 + 958716 CA i tarSyr2.KE939134v1 I 190 I 279 s micMur3.chr32 1612338 2 - 9149476 CA i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11060488 2 + 30473821 AA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598738 2 + 58134056 CA i canFam3.chr20 I 31 C 0 s dasNov3.JH563077 1817485 2 - 2187301 CA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e panPan2.chr3 204762852 0 - 205426864 C e panTro5.chr3 201994817 0 - 202621043 C a score=172363.000000 s hg38.chrUn_KI270749v1 107607 14 + 158759 GTTATGTTCAAATA s panTro5.chr3 201994817 14 - 202621043 GTTATGTTCAAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762852 14 - 205426864 GTTATGTTCAAATA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579666 14 + 86207423 GTTATGTTCAAATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062718 14 + 204787373 GTTATGTTCAAATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994562 14 - 192460366 GTTATGTTCAAATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106528 14 - 17224310 GTTGTGTTCAAATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418715 14 - 41321030 GTTATGTTCAAATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490175 14 - 101219884 GTTATGTTCAAATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876154 14 - 924385 GTTATGTTCAAATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717155 14 - 10587913 GTTATGTTCAAATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052359 14 - 98464013 GTTAAGTTCAAATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723955 14 + 27742158 GTTAAGTTCAAATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261386 14 - 4835464 GTTAAGTTCAAATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720290 14 + 4093027 GTTAAGTTCAAATA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612340 14 - 9149476 GTTATGTTCAAATA i micMur3.chr32 C 0 I 300 s otoGar3.GL873534 11060490 14 + 30473821 GTCACGTTCAAATA i otoGar3.GL873534 C 0 I 2 s canFam3.chr20 16598740 14 + 58134056 GTGTCATTTTAATA i canFam3.chr20 C 0 I 21 s dasNov3.JH563077 1817487 14 - 2187301 GCTATATTAAACTG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1376175 29 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230422 29 - 2311269 I e tarSyr2.KE939134v1 174550 279 + 958716 I a score=123266.000000 s hg38.chrUn_KI270749v1 107621 15 + 158759 TAA-AT------AAATATACTT------- s panTro5.chr3 201994831 15 - 202621043 TAA-AT------AAATATACTT------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762866 15 - 205426864 TAA-AT------AAATATACTT------- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579680 15 + 86207423 TAA-AT------AAATATACTT------- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062732 15 + 204787373 TAA-AT------AAATATACTT------- i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60994576 15 - 192460366 TAA-AT------AAATATACTT------- i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11106542 15 - 17224310 TAA-AT------AAATATACTT------- i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17418729 16 - 41321030 TAA-AT-----AAAATATACTT------- i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64490189 15 - 101219884 TAA-AT------AAATATACTT------- i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 876168 15 - 924385 TAA-AT------AAATATACTT------- i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6717169 15 - 10587913 TAA-AT------AAATATACTT------- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052373 15 - 98464013 TAA-AT------AAATGTACTT------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723969 15 + 27742158 TAA-AT------AAACGTACTT------- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261400 15 - 4835464 TAA-AT------AAATGTACTT------- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720304 15 + 4093027 TAA-AT------AAATGTACGT------- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11060506 16 + 30473821 TAATAC------AAATCTTGCT------- i otoGar3.GL873534 I 2 C 0 s canFam3.chr20 16598775 21 + 58134056 TGA-ATCCCTAAAACTATGCTG------- i canFam3.chr20 I 21 C 0 s dasNov3.JH563077 1817501 22 - 2187301 CAG-CT------GAATATAGCTGACTCCA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612354 300 - 9149476 I e rhiRox1.KN296641v1 1376175 29 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230422 29 - 2311269 I e tarSyr2.KE939134v1 174550 279 + 958716 I a score=11095.000000 s hg38.chrUn_KI270749v1 107636 1 + 158759 A s panTro5.chr3 201994846 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762881 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579695 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062748 1 + 204787373 A i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60994592 1 - 192460366 A i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11106558 1 - 17224310 A i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17418746 1 - 41321030 A i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64490205 1 - 101219884 A i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 876184 1 - 924385 A i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6717184 1 - 10587913 A i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1376204 1 - 1467263 A i rhiRox1.KN296641v1 I 29 I 314 s rhiBie1.NW_016820128v1 1230451 1 - 2311269 A i rhiBie1.NW_016820128v1 I 29 I 314 s calJac3.chr15 46052388 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723984 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261415 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720319 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11060522 1 + 30473821 G i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598796 1 + 58134056 G i canFam3.chr20 C 0 I 5 s dasNov3.JH563077 1817523 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612354 300 - 9149476 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e tarSyr2.KE939134v1 174550 279 + 958716 I a score=100266.000000 s hg38.chrUn_KI270749v1 107637 10 + 158759 TGTTTAAATA s panTro5.chr3 201994847 10 - 202621043 TGTTTAAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762882 10 - 205426864 TGTTTAAATA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579696 10 + 86207423 TGTTTAAATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062749 10 + 204787373 TGTTTAAATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994593 10 - 192460366 TGTTTAAATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106559 10 - 17224310 TGTTTAAATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418747 10 - 41321030 TGTTTAAATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490206 10 - 101219884 TGTTTAAATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876185 10 - 924385 TGTTTAAATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717186 10 - 10587913 TGTTTAAATA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46052389 10 - 98464013 TATTTAAATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723985 10 + 27742158 TACTTAAATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261416 10 - 4835464 TATTTAAATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720320 10 + 4093027 CATTTAAATA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11060523 10 + 30473821 TGCCCCAATA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598802 10 + 58134056 AGTTCTGCCA i canFam3.chr20 I 5 C 0 s dasNov3.JH563077 1817524 10 - 2187301 TATTTGAATA i dasNov3.JH563077 C 0 I 804 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612354 300 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174550 279 + 958716 I a score=65315.000000 s hg38.chrUn_KI270749v1 107647 6 + 158759 CAGATA s panTro5.chr3 201994857 6 - 202621043 CAGATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762892 6 - 205426864 CAGATA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579706 6 + 86207423 CAGATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062759 6 + 204787373 CAGATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994603 6 - 192460366 CAGATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106569 6 - 17224310 CAGATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418757 6 - 41321030 CAGATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490216 6 - 101219884 CTGATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876195 6 - 924385 CAGATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717196 6 - 10587913 CAGATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052399 6 - 98464013 CAGATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723995 6 + 27742158 CAGATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261426 6 - 4835464 CAGATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720330 6 + 4093027 CAGATA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11060533 6 + 30473821 CAAATA i otoGar3.GL873534 C 0 I 835 s canFam3.chr20 16598812 6 + 58134056 TGGGTA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612354 300 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174550 279 + 958716 I e dasNov3.JH563077 1817534 804 - 2187301 I a score=11785.000000 s hg38.chrUn_KI270749v1 107653 2 + 158759 -CA s panTro5.chr3 201994863 2 - 202621043 -CA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762898 2 - 205426864 -CA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579712 2 + 86207423 -CC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062765 2 + 204787373 -CA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994609 2 - 192460366 -CA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106575 2 - 17224310 -CA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418763 2 - 41321030 -CA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490222 2 - 101219884 -CA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876201 2 - 924385 -CA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717202 2 - 10587913 -CA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052405 2 - 98464013 -CA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724001 2 + 27742158 -CA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261432 2 - 4835464 -CA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720336 2 + 4093027 -CA i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16598818 2 + 58134056 CC- i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612354 300 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174550 279 + 958716 I e otoGar3.GL873534 11060539 835 + 30473821 I e dasNov3.JH563077 1817534 804 - 2187301 I a score=11849.000000 s hg38.chrUn_KI270749v1 107655 1 + 158759 T s panTro5.chr3 201994865 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762900 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579714 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062767 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994611 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106577 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418765 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490224 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876203 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717204 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052407 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724003 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261434 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720338 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 174829 1 + 958716 T i tarSyr2.KE939134v1 I 279 I 345 s otoGar3.GL873534 11061374 1 + 30473821 T i otoGar3.GL873534 I 835 C 0 s canFam3.chr20 16598820 1 + 58134056 C i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612354 300 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e dasNov3.JH563077 1817534 804 - 2187301 I a score=159684.000000 s hg38.chrUn_KI270749v1 107656 21 + 158759 CAATAAATGCAATGACTGTCA s panTro5.chr3 201994866 21 - 202621043 CAATAAATGCAATGACTGTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762901 21 - 205426864 CAATAAATGCAATGACTGTCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579715 21 + 86207423 CAGTAAATGCAATGACTGTCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062768 21 + 204787373 CGCTAAATGCGATGATTGTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994612 21 - 192460366 CGCTAAATGCGATGATTGTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106578 21 - 17224310 CGCTAAATGCGATGATTGTCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418766 21 - 41321030 CGCTAAATGCGATGATTGTGA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490225 21 - 101219884 CGCTAAATGCGATGATTGTCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876204 21 - 924385 CGCTAAATGCGATGATTGTCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717205 21 - 10587913 CGCTAAATGCGATGATTGTCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052408 21 - 98464013 CACTAAATGTGATGATTCTCG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724004 21 + 27742158 CACTAAATGTGATGATTCTTG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261435 21 - 4835464 CACTGAATGTGATGATTCTCG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720339 21 + 4093027 CACTAAATGTGATGATTCTCA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11061375 20 + 30473821 CACCAAATGTGAC-ACTCTCA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598821 20 + 58134056 CATCACAT-TACTCACTGATA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 592930 867 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612354 300 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I e dasNov3.JH563077 1817534 804 - 2187301 I a score=138648.000000 s hg38.chrUn_KI270749v1 107677 14 + 158759 -------TTTCAT--TCCTTCGT s panTro5.chr3 201994887 14 - 202621043 -------TTTCAT--TCCTTCAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762922 14 - 205426864 -------TTTCAT--TCCTTCAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579736 14 + 86207423 -------TTTCAT--TCCTTTGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062789 14 + 204787373 -------TTTCAT--TCCTTTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994633 14 - 192460366 -------TTTCAT--TCCTTTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106599 14 - 17224310 -------TTTCAT--TCCTTTGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418787 14 - 41321030 -------TTTCAT--TCCTTTGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490246 14 - 101219884 -------TTTCAT--TCCTTCTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876225 13 - 924385 -------TTTCAT--TCCTT-TT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717226 14 - 10587913 -------TTTCAT--TCCTTTGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052429 14 - 98464013 -------TTTCAT--TCCTTCGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724025 14 + 27742158 -------TTTCAT--TCCTTCGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261456 14 - 4835464 -------TTTCAC--TCCTTTGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720360 14 + 4093027 -------TTTCAT--TCCTTCGT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 593797 14 + 2414909 -------TTTCAT--TCCCCCGT i proCoq1.NW_012148064v1 I 867 C 0 s otoGar3.GL873534 11061395 14 + 30473821 -------TCCCCT--TCCTTTAG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598841 23 + 58134056 TTGAAGATTTCATCATCCTTGAT i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612354 300 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I e dasNov3.JH563077 1817534 804 - 2187301 I a score=673076.000000 s hg38.chrUn_KI270749v1 107691 58 + 158759 AAAGCCTTTCAttctcatctcttccttctctttgctgatctt------cAAATTCTGAAGCTTC s panTro5.chr3 201994901 58 - 202621043 AAAGCCTTTCACTCTCATCTCTTCCTTCTCTTTGCTGATTTT------CAAATTCTGAAGCTTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762936 58 - 205426864 AAAGCCTTTCACTCTCATCTCTTCCTTCTCTTTGCTGATTTT------CAAATTCTGAAGCTTC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579750 58 + 86207423 AAAGCCTTTCATTCTCATCGTTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062803 58 + 204787373 AAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994647 58 - 192460366 AAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106613 58 - 17224310 AAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418801 58 - 41321030 AAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490260 58 - 101219884 AAAGTCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876238 58 - 924385 AAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717240 58 - 10587913 AAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052443 58 - 98464013 AAAGCTGCTCATTCCCACCTCTTGCTTCTCTTTGCTGATCTT------CACATTCTGGAGCTTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724039 54 + 27742158 AAAGCCTCTCATTCCCACCT----CTTCTCTTTGCTGATCTT------CACTTTCTGAAGCTTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261470 58 - 4835464 AAAGCCTCTCATTCCCACCTCTTCCTTCTCTTTGCTGATCTT------CACATTCTGAAGCTTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720374 58 + 4093027 AAAGCCTCTCTTTCCCACCTCTTCCTTCTCGTTGCTGATCTT------CACATTCTGAAGCTTC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612654 58 - 9149476 AAAGCCTCTCATTCCCACCCTTCCCCTCTCTTTGTTGATCTT------CTCATGCTGTAGCTCC i micMur3.chr32 I 300 C 0 s proCoq1.NW_012148064v1 593811 58 + 2414909 AAAGCTTCTCATTCCCACCCTTCCCCTCTCTTTGCTGATCTT------CACATCCTGGAGGTCC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11061409 57 + 30473821 GGGGCCCCTCATTCCCACCCTTCCTC-CTCTTTGCTGATCTT------CATGGCTAGTAGGACC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598864 64 + 58134056 AAGGCCTCCCATACCCATCATTTCCTTATCTTTGCTATTTTTCTAGTCCACATCCCAAACATCC i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I e dasNov3.JH563077 1817534 804 - 2187301 I a score=1756584.000000 s hg38.chrUn_KI270749v1 107749 135 + 158759 TTTAATGGGATTCCTGTTAGCAGGTTCTCTCCTTTCTGTGTCCTCCATACACAAATGTCTGT-GGTTTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTTGGAAT s panTro5.chr3 201994959 135 - 202621043 TTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAAATGTCTGT-GGTTTCTTGATAATTATATTCCATGAATATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTTGGAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762994 135 - 205426864 TTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAAATGTCTGT-GGTTTCTTGATAATTATATTCCATGAATATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTTGGAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579808 135 + 86207423 TTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGACAATTATATTCCATGAAAATAT-----------TAATCATACCTTTATTCCCAATTTTATATACAAGCTGGAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062861 135 + 204787373 TTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCTATGAACATAT-----------TAATCATACTTTCGCTCCTAATTTTATATACAAGTTGGAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994705 135 - 192460366 TTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCTATGAACATAT-----------TAATCATACCTTCGCTCCTAATTTTATATACAAGTTGGAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106671 135 - 17224310 TTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCTATGAACATAT-----------TAATCATACCTTCGCTCCTAATTTTATATACAAGTTGGAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418859 135 - 41321030 TTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCTATGAACATAT-----------TAATCATACCTTCGCTCCTAATTTTATATACAAGTTGGAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490318 135 - 101219884 TTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTTGGAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876296 135 - 924385 TTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GATTTCTTGATAATTATATTCTATGAACATAT-----------TAATCATACCTTCACTCCTAATTTTATATACAAGTTGGAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717298 135 - 10587913 TTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTCGCTCCTAATTTTATATACAAGTTGGAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052501 135 - 98464013 TTTAATGTGACTGTTGTTAGCAAGTTCTCTCTTTTCTATGTTCTCCATGCACAAATGTTTGT-GCTCTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACTTTTGCTCCTAATTTTATATACAAGTTGGAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724093 134 + 27742158 TTTAATGTGACTCTTGCTAGCAAGTTCTCTCTTTTCTATGTTCTCCACACACAAATGTTTGT-GCTCTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTT-GAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261528 135 - 4835464 TTTAATGTGACTCTTATTGGCAAGTTCCGTCTTTTCTATGTTCTCCATACACAAATGTTTGT-GCTCTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTTGGAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720432 135 + 4093027 TTTAATGTGACTCTTGTTAGCAAGTTCTCTCTTTTCTATGTTCTCCATACACAAATGTTTGT-GCTCTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTTGCTCCTAATTTTATTTACAAGTTGGAAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612712 132 - 9149476 TTTAATGGCATTCCTGTTAGCAGGTTCTCTCCTTTGCATATCCTCCATACACAGATATCTGT-GGTCTACTGAAAGATGTATTCCATGAATATGT-----------TAGT-ATACGTTTGCTCTTAATTTTA--TACATATTGGAAT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 593869 133 + 2414909 TTTAATGGCATCCCCTTTAGCAGGTTCTCTTCTTTCTGTATCCTCCACACACAGATATCTGT-GGTCTACTGAGGGATGCATTCCATGAATCTGT-----------TAATCATACCTTTGCTCTTAATTTTA--TAAATGTTGGAAT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11061466 133 + 30473821 TTTAATGGCATTCCTGTAGGCAGGGTCTCTCCTTTCTGGATCCTCCCTGAGCAGGTGTCTGA-GGTCTATTGAGGAATATATTCCATGAATACGT-----------TAATCATACCTTTGCTTCTAATTTTA--TACAAGTTTGAAT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16598928 144 + 58134056 TGTAATGGGCTTCCAGTCAACAGATTCTGTCCTTTCCG-GTCCTCTGCACACAGAGGCTGGTGGGTTTATTAAGGAATATATTCCATGAATACATTCCATGAAAGGTACTCACTCCTTTACTTTTAATTTTA--CACAAGTTAAAAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1818338 128 - 2187301 TTGAATGAGCTTCCTAG----AAGCTCTTCCTCTCCTGTGTCCTCTGTATACAAA-GTCTGT-GGTCTATTGAAGATAATATCACATGAATAGAT-----------TAACCATTCCTTTTCTCCCAATAATA--TACAAGTTAAAAT i dasNov3.JH563077 I 804 I 16734 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I a score=92863.000000 s hg38.chrUn_KI270749v1 107884 6 + 158759 CCAGAC s panTro5.chr3 201995094 6 - 202621043 CCAGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763129 6 - 205426864 CCAGAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579943 6 + 86207423 CCAGAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062996 6 + 204787373 CCAGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994840 6 - 192460366 CCAGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106806 6 - 17224310 CCAGAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418994 6 - 41321030 CCAGAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490453 6 - 101219884 CCAGAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876431 6 - 924385 CCAGAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717433 6 - 10587913 CCAAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052636 6 - 98464013 CCAAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724227 6 + 27742158 CCAGAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261663 6 - 4835464 CCAGAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720567 6 + 4093027 CCAGAC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1612844 6 - 9149476 CCAGAC i micMur3.chr32 C 0 I 238 s proCoq1.NW_012148064v1 594002 6 + 2414909 CCAGAC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11061599 6 + 30473821 CCAGAC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16599072 6 + 58134056 CCAGGC i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I e dasNov3.JH563077 1818466 16734 - 2187301 I a score=94538.000000 s hg38.chrUn_KI270749v1 107890 9 + 158759 TAAGCTTTT s panTro5.chr3 201995100 9 - 202621043 TAAGCTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763135 9 - 205426864 TAAGCTTTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579949 9 + 86207423 TAAGCTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063002 9 + 204787373 TAAGCTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994846 9 - 192460366 TAAGCTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106812 9 - 17224310 TAAGCTTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419000 9 - 41321030 TAAGCTTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490459 9 - 101219884 TAAGCTTAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876437 9 - 924385 TAAGCTTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717439 9 - 10587913 TAAGCTTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052642 9 - 98464013 TAAGCTTTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724233 9 + 27742158 TAAACttta i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261669 9 - 4835464 TAAGCTTTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720573 9 + 4093027 TAAGCTTTA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 594008 9 + 2414909 TTAGCTTTT i proCoq1.NW_012148064v1 C 0 I 46 s otoGar3.GL873534 11061605 9 + 30473821 TTAGCTTTT i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16599078 9 + 58134056 TCAGCATTG i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I e dasNov3.JH563077 1818466 16734 - 2187301 I a score=21167.000000 s hg38.chrUn_KI270749v1 107899 6 + 158759 --TTATTT-- s panTro5.chr3 201995109 6 - 202621043 --TTATTT-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763144 6 - 205426864 --TTATTT-- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579958 6 + 86207423 --TTATTT-- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063011 6 + 204787373 --TTATTT-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994855 6 - 192460366 --TTATTT-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106821 6 - 17224310 --TTATTT-- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419009 6 - 41321030 --TTATTT-- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490468 8 - 101219884 --TTATTTAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876446 6 - 924385 --TTATTT-- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717448 7 - 10587913 --TTATTT-A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052651 6 - 98464013 --TAACTT-- i calJac3.chr15 C 0 I 5 s saiBol1.JH378125 27724242 6 + 27742158 --taattt-- i saiBol1.JH378125 C 0 I 5 s cebCap1.NW_016107467v1 261678 6 - 4835464 --TAATTT-- i cebCap1.NW_016107467v1 C 0 I 5 s aotNan1.NW_018502033v1 3720582 6 + 4093027 --TAATTT-- i aotNan1.NW_018502033v1 C 0 I 5 s otoGar3.GL873534 11061615 3 + 30473821 --TTA----- i otoGar3.GL873534 I 1 I 11 s canFam3.chr20 16599087 7 + 58134056 CTTTAAA--- i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594017 46 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I e dasNov3.JH563077 1818466 16734 - 2187301 I a score=910.000000 s hg38.chrUn_KI270749v1 107905 1 + 158759 A s panTro5.chr3 201995115 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763150 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579964 1 + 86207423 A i nomLeu3.chr21 C 0 I 282 s dasNov3.JH563077 1835200 1 - 2187301 A i dasNov3.JH563077 I 16734 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594017 46 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I e otoGar3.GL873534 11061618 11 + 30473821 I e manLeu1.NW_012098965v1 876452 0 - 924385 C e macNem1.NW_012018021v1 11106827 0 - 17224310 C e rheMac8.chr2 66063017 0 + 204787373 C e aotNan1.NW_018502033v1 3720588 5 + 4093027 I e cebCap1.NW_016107467v1 261684 5 - 4835464 I e canFam3.chr20 16599094 0 + 58134056 C e saiBol1.JH378125 27724248 5 + 27742158 I e calJac3.chr15 46052657 5 - 98464013 I e colAng1.NW_012114711v1 6717455 0 - 10587913 C e chlSab2.chr22 64490476 0 - 101219884 C e cerAty1.NW_012009469v1 17419015 0 - 41321030 C e macFas5.chr2 60994861 0 - 192460366 C a score=185302.000000 s hg38.chrUn_KI270749v1 107906 18 + 158759 AAAAAATTACAATCTCAA s panTro5.chr3 201995116 18 - 202621043 AAAAAATTACAATCTCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763151 18 - 205426864 AAAAAATTACAATCTCAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580247 18 + 86207423 AAAAAATTACAATCTCAA i nomLeu3.chr21 I 282 C 0 s rheMac8.chr2 66063017 18 + 204787373 AAAAAATTACAATCTCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994861 18 - 192460366 AAAAAATTACAATCTCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106827 18 - 17224310 AAAAAATTACAATCTCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419015 18 - 41321030 AAAAAATTACAATCTCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490476 18 - 101219884 AAAAAATCACAATCTCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876452 18 - 924385 AAAAAATTACAATCTCAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717455 18 - 10587913 AAAAAATTACAATCTCAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052662 16 - 98464013 --AAAAACAGAATCTCAA i calJac3.chr15 I 5 C 0 s saiBol1.JH378125 27724253 16 + 27742158 --aaaaataCCATCTCAA i saiBol1.JH378125 I 5 C 0 s cebCap1.NW_016107467v1 261689 16 - 4835464 --AAAAATACAATCTCAA i cebCap1.NW_016107467v1 I 5 C 0 s aotNan1.NW_018502033v1 3720593 16 + 4093027 --AAAAATACAATCTCAA i aotNan1.NW_018502033v1 I 5 C 0 s otoGar3.GL873534 11061629 18 + 30473821 AAGAAATAGAAATCTCGT i otoGar3.GL873534 I 11 I 6 s canFam3.chr20 16599094 18 + 58134056 ACAAAGTTGTAATCTCCA i canFam3.chr20 C 0 I 24 s dasNov3.JH563077 1835201 18 - 2187301 AAAAAATCATAATCTCAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594017 46 + 2414909 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I a score=253629.000000 s hg38.chrUn_KI270749v1 107924 20 + 158759 ATCAATAAATGCTTCTGCCA s panTro5.chr3 201995134 20 - 202621043 ATCAATAAATGCTTCTGCCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763169 20 - 205426864 ATCAATAAATGCTTCTGCCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580265 20 + 86207423 ATCAATAAATGCTTCTGCCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063035 20 + 204787373 ATCAATAAATGCTTCTGCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994879 20 - 192460366 ATCAATAAATGCTTCTGCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106845 20 - 17224310 ATCAATAAATGCTTCTGCCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419033 20 - 41321030 ATCAGTAAATGCTTCTGCCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490494 20 - 101219884 ATCAATAAATGCTTCTGCCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876470 20 - 924385 ATCAATAAATGCTTCTGCCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717473 20 - 10587913 ATCAATAAATGCTTCTGCCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052678 20 - 98464013 ATCAAAATATCCTTCTGCCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724269 20 + 27742158 ATCAAAAAATCCATCTGCCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261705 20 - 4835464 ATAAAAAAATCCTTCTGCCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720609 20 + 4093027 ATCAAAAAATCCTTCTGCCA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 594063 20 + 2414909 ATCAACAAATGCTTCTGCCA i proCoq1.NW_012148064v1 I 46 C 0 s otoGar3.GL873534 11061653 20 + 30473821 ATCCACAGATGCTTCTGCCT i otoGar3.GL873534 I 6 C 0 s canFam3.chr20 16599136 20 + 58134056 AAAAACAAATGCTTCTGTCA i canFam3.chr20 I 24 C 0 s dasNov3.JH563077 1835219 20 - 2187301 ATCAACAAATGCTTCAGCCA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e mm10.chr6 45763372 4676 - 149736546 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I a score=76829.000000 s hg38.chrUn_KI270749v1 107944 6 + 158759 TATTTT s panTro5.chr3 201995154 6 - 202621043 TATTTT i panTro5.chr3 C 0 I 2 s panPan2.chr3 204763189 6 - 205426864 TATTTT i panPan2.chr3 C 0 I 2 s nomLeu3.chr21 67580285 6 + 86207423 TATTTT i nomLeu3.chr21 C 0 I 2 s rheMac8.chr2 66063055 6 + 204787373 TATTTT i rheMac8.chr2 C 0 I 2 s macFas5.chr2 60994899 6 - 192460366 TATTTT i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11106865 6 - 17224310 TATTTT i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17419053 6 - 41321030 TATTTT i cerAty1.NW_012009469v1 C 0 I 2 s chlSab2.chr22 64490514 6 - 101219884 TATTTT i chlSab2.chr22 C 0 I 2 s manLeu1.NW_012098965v1 876490 6 - 924385 TATTTT i manLeu1.NW_012098965v1 C 0 I 2 s colAng1.NW_012114711v1 6717493 6 - 10587913 TATTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052698 6 - 98464013 TATTTT i calJac3.chr15 C 0 I 2 s saiBol1.JH378125 27724289 6 + 27742158 TATTTT i saiBol1.JH378125 C 0 I 2 s cebCap1.NW_016107467v1 261725 6 - 4835464 TATTTT i cebCap1.NW_016107467v1 C 0 I 2 s aotNan1.NW_018502033v1 3720629 6 + 4093027 TATTTT i aotNan1.NW_018502033v1 C 0 I 2 s proCoq1.NW_012148064v1 594083 6 + 2414909 TTTTTC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11061673 6 + 30473821 TTTACC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768048 6 - 149736546 TGTTTT i mm10.chr6 I 4676 C 0 s canFam3.chr20 16599156 6 + 58134056 CATTTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835239 6 - 2187301 TAATTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376205 314 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230452 314 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I a score=41370.000000 s hg38.chrUn_KI270749v1 107950 2 + 158759 TC s panTro5.chr3 201995162 2 - 202621043 TC i panTro5.chr3 I 2 C 0 s panPan2.chr3 204763197 2 - 205426864 TC i panPan2.chr3 I 2 C 0 s nomLeu3.chr21 67580293 2 + 86207423 TC i nomLeu3.chr21 I 2 C 0 s rheMac8.chr2 66063063 2 + 204787373 TC i rheMac8.chr2 I 2 C 0 s macFas5.chr2 60994907 2 - 192460366 TC i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11106873 2 - 17224310 TC i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17419061 2 - 41321030 TC i cerAty1.NW_012009469v1 I 2 C 0 s chlSab2.chr22 64490522 2 - 101219884 TC i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 876498 2 - 924385 TC i manLeu1.NW_012098965v1 I 2 C 0 s colAng1.NW_012114711v1 6717499 2 - 10587913 TC i colAng1.NW_012114711v1 C 0 I 2 s rhiRox1.KN296641v1 1376519 2 - 1467263 TC i rhiRox1.KN296641v1 I 314 I 13 s rhiBie1.NW_016820128v1 1230766 2 - 2311269 TC i rhiBie1.NW_016820128v1 I 314 I 144 s calJac3.chr15 46052706 2 - 98464013 TC i calJac3.chr15 I 2 C 0 s saiBol1.JH378125 27724297 2 + 27742158 TC i saiBol1.JH378125 I 2 C 0 s cebCap1.NW_016107467v1 261733 2 - 4835464 TC i cebCap1.NW_016107467v1 I 2 C 0 s aotNan1.NW_018502033v1 3720637 2 + 4093027 TC i aotNan1.NW_018502033v1 I 2 C 0 s proCoq1.NW_012148064v1 594089 2 + 2414909 TC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11061679 2 + 30473821 TC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768054 2 - 149736546 TT i mm10.chr6 C 0 C 0 s canFam3.chr20 16599162 2 + 58134056 TC i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1835245 2 - 2187301 TC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e micMur3.chr32 1612850 238 - 9149476 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e tarSyr2.KE939134v1 174830 345 + 958716 I a score=131866.000000 s hg38.chrUn_KI270749v1 107952 10 + 158759 --TCTTTCATTT s panTro5.chr3 201995164 10 - 202621043 --TCTTTCATTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763199 10 - 205426864 --TCTTTCATTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580295 10 + 86207423 --TCTTTCATTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063065 10 + 204787373 --TCTTCCATTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994909 10 - 192460366 --TCTTCCATTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106875 10 - 17224310 --TCTTCCATTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419063 10 - 41321030 --TCTTCCATTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490524 10 - 101219884 --TCTTCCATTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876500 10 - 924385 --TCTTCCATTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717503 10 - 10587913 --TCTTCCATTT i colAng1.NW_012114711v1 I 2 C 0 s calJac3.chr15 46052708 10 - 98464013 --TCTTCCATTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724299 10 + 27742158 --TCTTCCATTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261735 10 - 4835464 --TCTTCCATTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720639 10 + 4093027 --TCTTCCATTT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 594091 10 + 2414909 --TTTTTCATTT i proCoq1.NW_012148064v1 C 0 I 67 s otoGar3.GL873534 11061681 10 + 30473821 --TTTTTCTTAT i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45768056 10 - 149736546 --TCCTTCATAA i mm10.chr6 C 0 I 1 s canFam3.chr20 16599166 10 + 58134056 --TCTCCCAGTT i canFam3.chr20 I 2 I 2 s dasNov3.JH563077 1835247 12 - 2187301 TCTATTCCATTT i dasNov3.JH563077 C 0 I 16 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376521 13 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230768 144 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I a score=-658.000000 s hg38.chrUn_KI270749v1 107962 1 + 158759 A s panTro5.chr3 201995174 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763209 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580305 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063075 1 + 204787373 T i rheMac8.chr2 C 0 I 16 s macFas5.chr2 60994919 1 - 192460366 T i macFas5.chr2 C 0 I 16 s macNem1.NW_012018021v1 11106885 1 - 17224310 T i macNem1.NW_012018021v1 C 0 I 16 s cerAty1.NW_012009469v1 17419073 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 I 16 s chlSab2.chr22 64490534 1 - 101219884 T i chlSab2.chr22 C 0 I 16 s manLeu1.NW_012098965v1 876510 1 - 924385 T i manLeu1.NW_012098965v1 C 0 I 16 s colAng1.NW_012114711v1 6717513 1 - 10587913 T i colAng1.NW_012114711v1 C 0 I 16 s calJac3.chr15 46052718 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724309 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261745 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720649 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s dasNov3.JH563077 1835275 1 - 2187301 C i dasNov3.JH563077 I 16 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594101 67 + 2414909 I e mm10.chr6 45768066 1 - 149736546 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376521 13 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230768 144 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I e otoGar3.GL873534 11061691 2 + 30473821 I e canFam3.chr20 16599176 2 + 58134056 I a score=24670.000000 s hg38.chrUn_KI270749v1 107963 2 + 158759 AG s panTro5.chr3 201995175 2 - 202621043 AG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763210 2 - 205426864 AG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580306 2 + 86207423 AT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063092 2 + 204787373 AG i rheMac8.chr2 I 16 C 0 s macFas5.chr2 60994936 2 - 192460366 AG i macFas5.chr2 I 16 C 0 s macNem1.NW_012018021v1 11106902 2 - 17224310 AG i macNem1.NW_012018021v1 I 16 C 0 s cerAty1.NW_012009469v1 17419090 2 - 41321030 AG i cerAty1.NW_012009469v1 I 16 C 0 s chlSab2.chr22 64490551 2 - 101219884 AG i chlSab2.chr22 I 16 C 0 s manLeu1.NW_012098965v1 876527 2 - 924385 AG i manLeu1.NW_012098965v1 I 16 C 0 s colAng1.NW_012114711v1 6717530 2 - 10587913 AG i colAng1.NW_012114711v1 I 16 C 0 s rhiRox1.KN296641v1 1376534 2 - 1467263 AG i rhiRox1.KN296641v1 I 13 I 129 s calJac3.chr15 46052719 2 - 98464013 AG i calJac3.chr15 C 0 I 16 s saiBol1.JH378125 27724310 2 + 27742158 AG i saiBol1.JH378125 C 0 I 16 s cebCap1.NW_016107467v1 261746 2 - 4835464 AG i cebCap1.NW_016107467v1 C 0 I 16 s aotNan1.NW_018502033v1 3720650 2 + 4093027 AG i aotNan1.NW_018502033v1 C 0 I 16 s otoGar3.GL873534 11061693 2 + 30473821 GG i otoGar3.GL873534 I 2 I 10 s canFam3.chr20 16599178 2 + 58134056 GG i canFam3.chr20 I 2 I 15 s dasNov3.JH563077 1835276 2 - 2187301 AG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594101 67 + 2414909 I e mm10.chr6 45768066 1 - 149736546 I e micMur3.chr32 1612850 238 - 9149476 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230768 144 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I a score=126679.000000 s hg38.chrUn_KI270749v1 107965 14 + 158759 CATATTGCTAT--------AAT s panTro5.chr3 201995177 14 - 202621043 CATATTGCTAT--------AAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763212 14 - 205426864 CATATTGCTAT--------AAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580308 14 + 86207423 CATACTGCTAT--------AAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063094 14 + 204787373 CGTATTGCTAT--------AAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994938 14 - 192460366 CGTATTGCTAT--------AAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106904 14 - 17224310 CGTATTGCTAT--------AAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419092 14 - 41321030 CGTATTGCTAT--------AAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490553 14 - 101219884 CGTATTGCTAT--------AAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876529 14 - 924385 TGTATTGCTAT--------AAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717532 14 - 10587913 CGTATTGCTAT--------AAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052737 14 - 98464013 CATATTGATAC--------AAT i calJac3.chr15 I 16 C 0 s saiBol1.JH378125 27724328 14 + 27742158 CATATTGATAC--------AAT i saiBol1.JH378125 I 16 C 0 s cebCap1.NW_016107467v1 261764 14 - 4835464 CGTATTGATAC--------AAG i cebCap1.NW_016107467v1 I 16 C 0 s aotNan1.NW_018502033v1 3720668 14 + 4093027 CATATTGATAC--------AAT i aotNan1.NW_018502033v1 I 16 C 0 s otoGar3.GL873534 11061705 22 + 30473821 TGCATTGATATTAAATATCAAT i otoGar3.GL873534 I 10 C 0 s mm10.chr6 45768067 9 - 149736546 -----TCCCCT--------CAC i mm10.chr6 I 1 C 0 s canFam3.chr20 16599195 14 + 58134056 TGTATTCATAT--------AAT i canFam3.chr20 I 15 C 0 s dasNov3.JH563077 1835278 14 - 2187301 TACATTAATAT--------AAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594101 67 + 2414909 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376536 129 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230768 144 - 2311269 I e tarSyr2.KE939134v1 174830 345 + 958716 I a score=13671.000000 s hg38.chrUn_KI270749v1 107979 3 + 158759 AAC s panTro5.chr3 201995191 3 - 202621043 TAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763226 3 - 205426864 TAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580322 3 + 86207423 TAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063108 3 + 204787373 TAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994952 3 - 192460366 TAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106918 3 - 17224310 TAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419106 3 - 41321030 TAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490567 3 - 101219884 TAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876543 3 - 924385 TAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717546 3 - 10587913 TAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052751 3 - 98464013 GAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724342 3 + 27742158 GAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261778 3 - 4835464 GAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720682 3 + 4093027 GAT i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 175175 3 + 958716 GGT i tarSyr2.KE939134v1 I 345 I 453 s otoGar3.GL873534 11061727 2 + 30473821 -AT i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45768076 2 - 149736546 -AT i mm10.chr6 C 0 I 1 s canFam3.chr20 16599209 3 + 58134056 GAT i canFam3.chr20 C 0 I 12 s dasNov3.JH563077 1835292 3 - 2187301 AGT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594101 67 + 2414909 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376536 129 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230768 144 - 2311269 I a score=196725.000000 s hg38.chrUn_KI270749v1 107982 19 + 158759 ------------ACTTACTGTTCTTTTCTCA s panTro5.chr3 201995194 19 - 202621043 ------------ACCTACTGTTCTTTTCTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763229 19 - 205426864 ------------ACCTACTGTTCTTTTCTCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580325 19 + 86207423 ------------ACTTACTGTTATTTTCTCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063111 19 + 204787373 ------------ACTTACTGTTATTTTCTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994955 19 - 192460366 ------------ACTTACTGTTATTTTCTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106921 19 - 17224310 ------------ACTTACTGTTATTTTCTCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419109 19 - 41321030 ------------ACTTACTGTTATTTTCTCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490570 19 - 101219884 ------------ACTTACTGTTATTTTCTCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876546 19 - 924385 ------------ACTTACTGTTATTTTCTCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717549 19 - 10587913 ------------ACTTACTGTTATTTTCTCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052754 19 - 98464013 ------------CCTTACTGTTGTTTTCTTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724345 19 + 27742158 ------------CCTTACTGTTATTTTCTTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261781 19 - 4835464 ------------CCTTACTGTTATTTTCTTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720685 19 + 4093027 ------------CCTTACTGTTATTTTCTTA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11061730 19 + 30473821 ------------TGTTACTGTTTTGTTCTTT i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45768079 19 - 149736546 ------------ATTTTCTGGTCCAGTCTCA i mm10.chr6 I 1 C 0 s canFam3.chr20 16599224 19 + 58134056 ------------CCTTACTGTTTTATACTTC i canFam3.chr20 I 12 C 0 s dasNov3.JH563077 1835295 31 - 2187301 CCTTTAAATATTCCTTACTGTTTGGTTCTCA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594101 67 + 2414909 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376536 129 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230768 144 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=231341.000000 s hg38.chrUn_KI270749v1 108001 19 + 158759 CTAATTTATCAC---TCTTCTT s panTro5.chr3 201995213 22 - 202621043 CTAATTTATCACTCTTCTTCTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763248 22 - 205426864 CTAATTTATCACTCTTCTTCTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580344 19 + 86207423 CTAATTTATCAC---TCTTCTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063130 22 + 204787373 CTAATTTATCACTCACCTTCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994974 22 - 192460366 CTAATTTATCACTCACCTTCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106940 22 - 17224310 CTAATTTATCACTCACCTTCTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419128 22 - 41321030 CTAATTTATCACTCACCTTCTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490589 22 - 101219884 CTAATTTATCACTCATCTTCTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876565 22 - 924385 CTAATTTATCACTCACCTTCTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717568 22 - 10587913 CTAATTTATCACTCATCTTCTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052773 22 - 98464013 CTAATTTATCACTCATCTTCTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724364 22 + 27742158 TTAATTTATCACTCATCTTCTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261800 22 - 4835464 CTAATTTATCACTCATCTTCTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720704 22 + 4093027 CTAATTTATCACTCATCTTCTT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 594168 19 + 2414909 CTAATTTATCACTTAGCTT--- i proCoq1.NW_012148064v1 I 67 I 3 s otoGar3.GL873534 11061749 19 + 30473821 CTAACTTATCACTCATCTT--- i otoGar3.GL873534 C 0 I 3 s mm10.chr6 45768098 15 - 149736546 ----TTTATAGTACATCTT--- i mm10.chr6 C 0 C 0 s canFam3.chr20 16599243 19 + 58134056 CTACTTTATCATTCATCTT--- i canFam3.chr20 C 0 I 6 s dasNov3.JH563077 1835326 19 - 2187301 ---AAGCATTGCCCACCTTCTC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e micMur3.chr32 1612850 238 - 9149476 I e rhiRox1.KN296641v1 1376536 129 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230768 144 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=551791.000000 s hg38.chrUn_KI270749v1 108020 42 + 158759 ---CTTC--CTTT---CTTTATTATCCATGTAAATTTTAACCTTTCTAAG s panTro5.chr3 201995235 42 - 202621043 ---CTTC--CTTT---CTTTATTATCCATGTAAATTTTAACCTTTCTAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763270 42 - 205426864 ---CTTC--CTTT---CTTTATTATCCATGTAAATTTTAACCTTTCTAAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580363 42 + 86207423 ---CTTC--CTTT---CTTTATTATCCATGGAAATTTTAACCTTTCTAAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063152 42 + 204787373 ---CTTC--CTTT---CTTTATTATCCGTGTAAATTTTAACCTTTCTAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994996 42 - 192460366 ---CTTC--CTTT---CTTTATTATCCGTGTAAATTTTAACCTTTCTAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106962 42 - 17224310 ---CTTC--CTTT---CTTTATTATCCGTGTAAATTTTAACCTTTCTAAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419150 38 - 41321030 ---CTTC--CTTT---CTTTATTATCCGTGTAAATTTTAAC----CAAAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490611 42 - 101219884 ---CTTC--CTTT---CTTTATTATCCGTGTAAATTTTAACCTTTCTAAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876587 42 - 924385 ---CTTC--CTTT---CTTTATTATCCGTGTAAATTTTAACCTTTCTAAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717590 42 - 10587913 ---CTTC--CTTT---CTTTATTATCCGTGTAAATTTTAACCTTTCTAAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052795 41 - 98464013 ---CTTT--C-TT---TCTTATTATCCATGTAAATTTTATCCTTTCTAAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724386 35 + 27742158 ---CCT-----TT---CTTTATTATCCATGTAAATTTTA----TTCTAAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261822 39 - 4835464 ---CCT-----TT---CTTTATTATCCATGTAAATTTTATCCTTTCTAAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720726 42 + 4093027 ---CTTC--CTTT---CTTTATTATCCATGTAAATTTTATCCTTTCTAAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1613088 42 - 9149476 ---CTTC--CTCC---CTTTATTATCCACGTAAATTTTAACATTTCTAAA i micMur3.chr32 I 238 C 0 s proCoq1.NW_012148064v1 594190 42 + 2414909 ---CTTC--CTCC---CTTTATTATCCATGTAAATTTTAACATTTCTAAG i proCoq1.NW_012148064v1 I 3 I 48 s otoGar3.GL873534 11061771 45 + 30473821 ---CTTC--CTCCCTTCTTTATTATCAGTGTAATTATTAATCTTTATAAA i otoGar3.GL873534 I 3 C 0 s mm10.chr6 45768113 43 - 149736546 ---CCTCATCTTC---ATTTATTAACCATGTAAATTTTAACCTTTCTGA- i mm10.chr6 C 0 C 0 s canFam3.chr20 16599268 40 + 58134056 ---CCTC--CCCT---CTTTATTATCCATGTAAATTCTAACCT--CTAAA i canFam3.chr20 I 6 C 0 s dasNov3.JH563077 1835345 45 - 2187301 TTTCCTC--CAGT---CTCTGTTATTCATGTAAATTTTTACCCTTCTAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e rhiRox1.KN296641v1 1376536 129 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230768 144 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=97474.000000 s hg38.chrUn_KI270749v1 108062 13 + 158759 ATAAACTGA----------TTTG s panTro5.chr3 201995277 13 - 202621043 ACAGACTGA----------TTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763312 13 - 205426864 ACAGACTGA----------TTTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580405 11 + 86207423 ATAGACTGA----------TT-- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063194 13 + 204787373 ATAGACTGA----------TTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995038 13 - 192460366 ACAGACTGA----------TTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107004 13 - 17224310 ACAGACTGA----------TTTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419188 13 - 41321030 ACAGACTGA----------TTTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490653 23 - 101219884 ATAGACTGAtttttttttttttt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876629 13 - 924385 ACAGACTGA----------TTTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717632 13 - 10587913 AAAGACTGA----------TTTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052836 11 - 98464013 ATAGATTGG----------TT-- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724421 13 + 27742158 ATAGATTGA----------TTTG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261861 13 - 4835464 ATAGATTGA----------TTTG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720768 13 + 4093027 TTAGATTGA----------TTTG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1613130 13 - 9149476 CTAGACTGA----------TTTA i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11061816 13 + 30473821 CTAGACTTA----------TTTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768156 12 - 149736546 ACAGGCCAA----------TTC- i mm10.chr6 C 0 C 0 s canFam3.chr20 16599308 13 + 58134056 CTAGACAGG----------GTAC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835390 13 - 2187301 CTAGACTAA----------ATTA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594232 48 + 2414909 I e rhiRox1.KN296641v1 1376536 129 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230768 144 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=80490.000000 s hg38.chrUn_KI270749v1 108075 6 + 158759 TTTTTT s panTro5.chr3 201995290 6 - 202621043 TTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763325 6 - 205426864 TTTTTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580416 6 + 86207423 TTTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063207 6 + 204787373 TTTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995051 6 - 192460366 TTTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107017 6 - 17224310 TTTTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419201 6 - 41321030 TTTTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490676 6 - 101219884 tttttt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876642 6 - 924385 TTTTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717645 6 - 10587913 TTTTTT i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1376665 6 - 1467263 tttttt i rhiRox1.KN296641v1 I 129 C 0 s rhiBie1.NW_016820128v1 1230912 6 - 2311269 TTTTTT i rhiBie1.NW_016820128v1 I 144 I 169 s calJac3.chr15 46052847 6 - 98464013 ATTTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724434 6 + 27742158 TTTTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261874 6 - 4835464 TTTTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720781 6 + 4093027 TTTTTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1613143 6 - 9149476 TTTTTT i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11061829 6 + 30473821 TTTTCA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768168 4 - 149736546 -TTTC- i mm10.chr6 C 0 C 0 s canFam3.chr20 16599321 5 + 58134056 -CCCCC i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1835403 6 - 2187301 CTCTTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594232 48 + 2414909 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=7255.000000 s hg38.chrUn_KI270749v1 108081 1 + 158759 T s panTro5.chr3 201995296 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763331 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580422 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063213 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995057 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107023 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419207 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490682 1 - 101219884 t i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876648 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717651 1 - 10587913 T i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1376671 1 - 1467263 t i rhiRox1.KN296641v1 C 0 I 580 s micMur3.chr32 1613149 1 - 9149476 T i micMur3.chr32 C 0 I 61 s otoGar3.GL873534 11061835 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768172 1 - 149736546 T i mm10.chr6 C 0 C 0 s canFam3.chr20 16599327 1 + 58134056 C i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1835409 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594232 48 + 2414909 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230918 169 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I e aotNan1.NW_018502033v1 3720787 0 + 4093027 C e cebCap1.NW_016107467v1 261880 0 - 4835464 C e saiBol1.JH378125 27724440 0 + 27742158 C e calJac3.chr15 46052853 0 - 98464013 C a score=303006.000000 s hg38.chrUn_KI270749v1 108082 34 + 158759 GCCGTGTAGTAAATGATCCTCCTACTTCTAGTCA s panTro5.chr3 201995297 34 - 202621043 GCCATGTAGTAAATGATCCTCCTACTTCTAGTCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763332 34 - 205426864 GCCATGTAGTAAATGATCCTCCTACTTCTAGTCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580423 34 + 86207423 GCCACATACTAAATGATCCTCCTACTTCTAGTCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063214 34 + 204787373 GCCATGTAGTAAAAGATCCTCCTACATCTAGTCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995058 34 - 192460366 GCCATGTAGTAAAAGATCCTCCTACATCTAGTCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107024 34 - 17224310 GCCATGTAGTAAAAGATCCTCCTACATCTAGTCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419208 34 - 41321030 GCCATGTAGTAAAAGATCCTCCTACGTCTAGTCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490683 34 - 101219884 GCTGTGTAGTAAAAGATCCTCCTACGTCTAGTCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876649 34 - 924385 GCCATGTAGTAAAAGATCCTCCTACGTCTAGTCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717653 34 - 10587913 GCCATGTAGTAAAAGGTCCTCCTACGTCTAGTCA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46052853 33 - 98464013 -CACTGTAGTAAAAGATCCTTCTACTTCTAGTAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724440 33 + 27742158 -CCCTGTAGTCAAAGATCCTCCTACTTCTAGTCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261880 33 - 4835464 -CCCTGTAGTAAAAGATCCTCCTACTTCTAGTCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720787 33 + 4093027 -CCGTGTAGTAAAAGATCCTCCTACTTCTAGTCA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11061836 25 + 30473821 -----GTGGCAAAGTA----CCTACTTCTATTTG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768173 29 - 149736546 ----GGTGGTAAAAG-CCTTCTTATTCCTACTTG i mm10.chr6 C 0 C 0 s canFam3.chr20 16599328 30 + 58134056 -CCCGGGAATAAAGGAC---CCTACTCATATTTG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835410 27 - 2187301 -------GGGTAAGGATTCTCCTACTTATATTTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594232 48 + 2414909 I e micMur3.chr32 1613150 61 - 9149476 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230918 169 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=344679.000000 s hg38.chrUn_KI270749v1 108116 34 + 158759 AATTCTC--------------------------------------------------CACAGCATCTATCAGAGTCTAGTTGTT s panTro5.chr3 201995331 34 - 202621043 AATTCTC--------------------------------------------------CACAACATCTATCAGAGTCTAGTTGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763366 34 - 205426864 AATTCTC--------------------------------------------------CACAACATCTATCAGAGTCTAGTTGTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580457 31 + 86207423 AATTCTC--------------------------------------------------CACAGCATCTATCAGAATCTA---GTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063248 30 + 204787373 AATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995092 30 - 192460366 AATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107058 30 - 17224310 AATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419242 30 - 41321030 AATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490717 30 - 101219884 AATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876683 30 - 924385 AATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717687 30 - 10587913 AATTCCC--------------------------------------------------CATGGCATCTATCAGAGTGTAG----T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052886 30 - 98464013 AGTTCTC--------------------------------------------------CACAGCATCTATCAGAGTGTAA----T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724473 30 + 27742158 AGTTTTC--------------------------------------------------CATAGCATCTATCAGAGTCTAG----T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261913 30 - 4835464 AGTTCTC--------------------------------------------------CACAGCATCTATCAGAATCTAG----C i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720820 30 + 4093027 AGTTCTC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----T i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 594280 30 + 2414909 AATTCTC--------------------------------------------------CACAGCATCTATCAGAGTATAG----T i proCoq1.NW_012148064v1 I 48 C 0 s otoGar3.GL873534 11061861 30 + 30473821 AATTCCC--------------------------------------------------CACGTCATGTATCAGAGTATAG----C i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45768202 80 - 149736546 AGttttcttttcttttttttttttttcttttttttttttttttttttttttttttttCACAGCATCAACCAGAGAGCAG----T i mm10.chr6 C 0 C 0 s canFam3.chr20 16599358 30 + 58134056 AATTCTC--------------------------------------------------CATAGCTTCTATCAGAGTATAT----T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835437 30 - 2187301 AATTCTC--------------------------------------------------CACATCATCTTTCTGAGTATAT----T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e micMur3.chr32 1613150 61 - 9149476 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230918 169 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=1375373.000000 s hg38.chrUn_KI270749v1 108150 97 + 158759 ACTAAAC------------AATGGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-GATGA-TTCCTAGTGAAGTTCATCACTCCCAGTGCATGAGGTAAGAGTT s panTro5.chr3 201995365 98 - 202621043 ACTAAAC------------AATGGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-GATGATTTCCTAGTGAAGTTCATCACTCCCAGTGCGTGAGGTAAGAGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763400 98 - 205426864 ACTAAAC------------AATGGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-GATGATTTCCTAGTGAAGTTCATCACTCCCAGTGCGTGAGATAAGAGTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580488 98 + 86207423 ACTAAAC------------AATTGTTGCAGTTTTGTGTTGTGG-TGACTTACCAGAAAGAAC-AATGATTTCCTAGTGAAGTTCATCACTCCCAGTGCATGAGATAAGAGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063278 98 + 204787373 ACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATCACTCCCAGTGCATGAGATAAGAGTT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60995122 98 - 192460366 ACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATCACTCCCAGTGCATGAGATAAGAGTT i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11107088 98 - 17224310 ACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATCACTCCCAGTGCATGAGATAAGAGTT i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17419272 98 - 41321030 ACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATTACGCCCAGTGCATGAGATAAGAGTT i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64490747 98 - 101219884 ACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATTATTCCCAGTGCATGAGATAAGAGTT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 876713 98 - 924385 ACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATTACTCCCAGTGCATGAGATAAGAGTT i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6717717 98 - 10587913 ACTAAAC------------AATTATTTCAATTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATTACTCCCAGTGCATCAGATAAGAGTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052916 98 - 98464013 ACTAAAC------------AGTAATTGCAGTTTTGTGCTGTGG-CGACTCACCATAAAGAAC-AATGATTTCCTAGTGAAGTTCCTTACTCCCAGTGCATGAGATAAGAGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724503 99 + 27742158 ACTAAAC------------AGTAATTGCAGTTTTGTGCTGTGG-TGCCTCACTGTAAAGAACAAATGATTTCCTAGTGAAGTTCATTACTCCCAGTGCATGAGATAAAAGTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261943 98 - 4835464 ACTAAAC------------AGTAATTGCAGTTTTGTGCTGTGG-TGACTCACCATAAAGAAC-AATGATTTCCTAGTGAAGTTCATTAGTCCCAGTGAATGAGATAAAAGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720850 98 + 4093027 ACTAAAC------------AGTAATTGCAGTTTTGTGCTGTGG-TGACTCACCATAAAGAAC-AATGATTTCCTAGTGAAGTTCATTACTCCCAGTGCATGAGCTAAGAGTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1613211 96 - 9149476 ACTAAAT------------AATAATTGCAGTTTTGTTCTGTGGTTGACTTGCCATAAAGAAC-A---ATTTCCTAGTGAAATTCACCGCTCCCAGGGCACAAGGTAAGAGGT i micMur3.chr32 I 61 C 0 s proCoq1.NW_012148064v1 594310 96 + 2414909 ACTAAAT------------AATAATTGCAGTTTTGTGCTGTGGTTGACTTTCCATAAAGAAC-A---ATTTCCTAGTGAAATTCATTGCTCCCAGGGCATGAGGTAAGTGTT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11061892 95 + 30473821 -CCAAAC------------AATAATTGGAGCTTTGCACTGTAGTTGACTTTCCATAAAGAAT-G---ATTTTCTGGTCAAATTCATTGCTCCCAGGGCGTGAGGTTAGAATT i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45768282 111 - 149736546 ACTAGGTAAGGGCTCTATAAATATTTGCAGGTTTGCGCTGTGGTTGACCTACCATAAAGAAC-AATGATTTCCTAAGGAAATTCACTGCTCCCAGTGCATGAGGCAAGAGCT i mm10.chr6 C 0 C 0 s canFam3.chr20 16599388 111 + 58134056 ATTAAACAAAGACTCAGTAAATATTTGCAGCTTTGTGCTGTGGCTGCTTTGCCATAAGAAAC-AACGGTTTCCTAGTGACATTCACTGCTCCTACTGCCTGAGGTAAGAAAC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835467 111 - 2187301 ACTAAATAAGAGTACAATAAATATATGTTGCTTTATGCTGTGATCAACTTGTCATAAAGAAC-ATCCATTTCCTAGTGAAACTCACTGGTCCCAGGGCATGAGGTAGAAATT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1230918 169 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=21021.000000 s hg38.chrUn_KI270749v1 108247 1 + 158759 A s panTro5.chr3 201995463 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763498 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580586 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063377 1 + 204787373 A i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60995221 1 - 192460366 A i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11107187 1 - 17224310 A i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17419371 1 - 41321030 A i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64490846 1 - 101219884 A i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 876812 1 - 924385 A i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6717815 1 - 10587913 A i colAng1.NW_012114711v1 C 0 I 1 s rhiBie1.NW_016820128v1 1231087 1 - 2311269 A i rhiBie1.NW_016820128v1 I 169 I 404 s calJac3.chr15 46053014 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724602 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262041 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720948 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1613307 1 - 9149476 A i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 594406 1 + 2414909 A i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11061987 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768393 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16599499 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835578 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=848551.000000 s hg38.chrUn_KI270749v1 108248 57 + 158759 CA-TTTCAGCAAATGTGGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAA s panTro5.chr3 201995464 57 - 202621043 CA-TTTCAGCAAATGTGGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763499 57 - 205426864 CA-TTTCAGCAAATGTGGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580587 57 + 86207423 TG-TTTCAGCAAATGCAGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063378 57 + 204787373 CG-TTTCAGCAAATGTGGGCCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995222 57 - 192460366 CA-TTTCAGCAAATGTGGGCCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107188 57 - 17224310 CG-TTTCAGCAAATGTGGGCCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419372 57 - 41321030 CG-TTTCAGCAAATGTGGGCCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490847 57 - 101219884 CG-TTTCAGCAAATGTGGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876813 57 - 924385 CG-TTTCAGCAAATGTGGGCCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717817 57 - 10587913 CG-TTTGAGCAAATGTGGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46053015 56 - 98464013 CG-TTTCAGCAATTGTGGA-CTAAAAACAAAAGGTGAAACACTTCATCAGATGTTTCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724603 57 + 27742158 CG-TTTCAGCAGTTGTGGACCTAAAAACAAAAGGTGAAACACTTCATCAGACGCTTCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262042 57 - 4835464 CA-TTTCAGCAGTTGTGGACCTAAAAACAAAAGGTGAAACACTTCTTCAGATGCTTCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720949 57 + 4093027 CA-TTTCAGCAGTTGTGGACCTAAAAACAAAAGGTGAAACACTTCATCAGATGCTTCA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1613308 57 - 9149476 CA-TTTTAGCAATCGTAGACCTAAAAACAAAAGGTGAACAACTTCATCAGAGGCTTAA i micMur3.chr32 C 0 I 35 s proCoq1.NW_012148064v1 594407 57 + 2414909 CA-TTTTAGCAATTGTAGACCTAAAAACAGAAGGTGAACAACTTCATCAGAGGCTTAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11061988 58 + 30473821 CATTTTTAGCAATTGTAGACCTAAAAACAGCAGGTGAAGAAATTTATCAGATGCTTAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768394 57 - 149736546 GA-TTTTAGCAACTGTGTACCTAAAACTAAAGAGCAAACAACTTCATGGGAAGCTGAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16599500 57 + 58134056 CA-TTTTAGCAATTGTGGACCTAAAAAGGAGAGGTAAACGACTTCATCAGAAACCTAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835579 57 - 2187301 CA-TTTTAGCAGTTGTGTACCTAAAAAGAAAAAGTTAGCACCTTCATCAGATAATTCA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=146828.000000 s hg38.chrUn_KI270749v1 108305 35 + 158759 TAATAAAATTCAATGCAATTTGCTCACAGATGTAC----- s panTro5.chr3 201995521 35 - 202621043 TAATAAAATTCAATGCCATTTGCTCACAGATGTAC----- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763556 35 - 205426864 TAATAAAATTCAATGCCATTTGCTCACAGATGTAC----- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580644 35 + 86207423 CAATAAAATTCAGTGCCATTTGCTCACAGATGTAC----- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063435 35 + 204787373 CAATAAAATTCAATGCCTTTTGCTCACAGATACAC----- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995279 35 - 192460366 CAATAAAATTCAATGCCTTTTGCTCACAGATACAC----- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107245 35 - 17224310 CAATAAAATTCAATGCCTTTTGCTCACAGATACAC----- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419429 35 - 41321030 CAATAAAATTCAATGCCTTTTGCTCACAGATACAC----- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490904 35 - 101219884 CAATAAAATTCGATGCCATTTGCTCACAGATATAC----- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876870 35 - 924385 CAATAAAATTCAACGCCTTTTGCTCACAGATACAC----- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717874 35 - 10587913 CAACAAAATTCAATGCCATTTGCTCACAGATATAC----- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053071 3 - 98464013 CAA------------------------------------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724660 3 + 27742158 CAA------------------------------------- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262099 3 - 4835464 CAA------------------------------------- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721006 3 + 4093027 CAA------------------------------------- i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 594464 35 + 2414909 CAGTAAAAGTGAATGACATTTGGTCACAGTCTTCG----- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11062046 35 + 30473821 AAATAAAAGTGAATGGCATTTGGTCATGGTCTTCC----- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768451 35 - 149736546 CAATAAAACTGAAAGGCATTTTTATTGAGATCTTA----- i mm10.chr6 C 0 I 1 s canFam3.chr20 16599557 35 + 58134056 CAACAAAATTGAATGCCACTTAGTCACGGTCTTAC----- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835636 40 - 2187301 CAATGGAATTTAATACTATTTGGTTATGGTTTTGTCTTAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e micMur3.chr32 1613365 35 - 9149476 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=197481.000000 s hg38.chrUn_KI270749v1 108340 24 + 158759 TTTTTCAGCTA-----------------AACTGGGTCTCAG s panTro5.chr3 201995556 24 - 202621043 TTCTTCAGCTA-----------------AACTTGGTCTCAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763591 24 - 205426864 TTTTTCAGCTA-----------------AACTTGGTCTCAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580679 24 + 86207423 TTTTTCAGCTA-----------------AACTGGGTCTCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063470 24 + 204787373 TTTTTCAGCTA-----------------AACTAGGTCTCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995314 24 - 192460366 TTTTTCAGCTA-----------------AACTAGGTCTCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107280 24 - 17224310 TTTTTCAGCTA-----------------AACTAGGTCTCAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419464 24 - 41321030 TTTTTCAGCTA-----------------AACTAGGTCTCAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490939 24 - 101219884 TTTTTCAGCTA-----------------AACTAGGTCTCAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876905 24 - 924385 TTTTTCAGCTA-----------------AACTAGGTCTCAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717909 24 - 10587913 TTTTTCAGCTA-----------------AACTAGGTCTCAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053074 4 - 98464013 -------------------------------------TCAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724663 4 + 27742158 -------------------------------------TCAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262102 4 - 4835464 -------------------------------------TCAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721009 4 + 4093027 -------------------------------------TCAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1613400 24 - 9149476 TTTTTCAGCTA-----------------AACTTGGTCTCGG i micMur3.chr32 I 35 C 0 s proCoq1.NW_012148064v1 594499 24 + 2414909 TTTTTCAGCTA-----------------AACTTGGTCTCAG i proCoq1.NW_012148064v1 C 0 I 68 s otoGar3.GL873534 11062081 24 + 30473821 TTTTTCAGGTA-----------------AACTGGGTCTCAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768487 41 - 149736546 TTGTTCAGCTAAGCTGAGGTCCTGGTTTAACTGGGCCCCAG i mm10.chr6 I 1 C 0 s canFam3.chr20 16599592 24 + 58134056 TTTTTCAGCTA-----------------ATCCAGGTCTTAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835676 24 - 2187301 TTTTTCTACTA-----------------ATCCAGGTCCTGG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=218851.000000 s hg38.chrUn_KI270749v1 108364 15 + 158759 GATCCACATGTAGTT s panTro5.chr3 201995580 15 - 202621043 GATCCACATGTAGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763615 15 - 205426864 GATCCACATGTAGTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580703 15 + 86207423 GATCCACATGTAGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063494 15 + 204787373 GATCCACATGCAGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995338 15 - 192460366 GATCCACATGCAGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107304 15 - 17224310 GATCCACATGCAGTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419488 15 - 41321030 GATCCACATGCAGTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490963 15 - 101219884 GATCCACATGCAGTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876929 15 - 924385 GATCCACATGCAGTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717933 15 - 10587913 GATCCACATGCAGTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053078 15 - 98464013 GATCCACATATAGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724667 15 + 27742158 GATCCACATGTAGTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262106 15 - 4835464 GATCCACATGTAGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721013 15 + 4093027 GATCCACCTGTAGTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1613424 15 - 9149476 GATCCAAATGTAGTT i micMur3.chr32 C 0 I 65 s otoGar3.GL873534 11062105 15 + 30473821 GACCCAAATGTAGTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768528 15 - 149736546 AATCCAAATATAGTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16599616 15 + 58134056 GAGTCACAGGCAGTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835700 15 - 2187301 GACCCAAATGTAGTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594523 68 + 2414909 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=244201.000000 s hg38.chrUn_KI270749v1 108379 27 + 158759 CCTCAGCGCTGTAGCGCAGCTCTGATT s panTro5.chr3 201995595 27 - 202621043 TCTCAGCGCTGTCGCGCAGCTCTGATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763630 27 - 205426864 TCTCAGCGCTGTAGCGCAGTTCTGATT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580718 27 + 86207423 TCTCAGCGCTGCAGCGCAGCTCTGATT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063509 27 + 204787373 TCTCAGCGCTGTAGCGCAGCTCTGACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995353 27 - 192460366 TCTCAGCGCTGTAGCGCAGCTCTGACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107319 27 - 17224310 TCTCAGCGCTGTAGCGCAGCTCTGACT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419503 27 - 41321030 TCTCAGCGCTGTAGCGCAGCTCTGACT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490978 27 - 101219884 TCTCAGCGTTGTAGCAGAGTTCTGACT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876944 27 - 924385 TCTCAGCGCTGTAGCGCAGCTCTGACT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717948 27 - 10587913 TCTCAGCGCTGTGGCGCAGCTCTGACT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053093 27 - 98464013 TCGCAGTGCTGTATCAGAGCTCTGATT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724682 27 + 27742158 TCTCAGTGCTATATCAAAGCTCTGAGA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262121 27 - 4835464 TCTCAGTGCTATATCAAAGCTCTGATT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721028 27 + 4093027 TCTCAGTGCTATATCAAAGCTCTGATT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11062120 22 + 30473821 --TGAGTGCAATATTGCAACTCAG--- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768543 25 - 149736546 --TTATAGTTGTAACACTGCTTGGGTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16599631 25 + 58134056 --TTAACACTATGTTGCAACTCTGGTT i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1835715 25 - 2187301 --ACAGCTCTACACTGTAGCTCTGATT i dasNov3.JH563077 C 0 I 1 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594523 68 + 2414909 I e micMur3.chr32 1613439 65 - 9149476 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175178 453 + 958716 I a score=11422.000000 s hg38.chrUn_KI270749v1 108406 1 + 158759 T s panTro5.chr3 201995622 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763657 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580745 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063536 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995380 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107346 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419530 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491005 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876971 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717975 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053120 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724709 1 + 27742158 C i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262148 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721055 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 175631 1 + 958716 T i tarSyr2.KE939134v1 I 453 I 1693 s mm10.chr6 45768568 1 - 149736546 C i mm10.chr6 C 0 I 1 s canFam3.chr20 16599657 1 + 58134056 T i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1835741 1 - 2187301 T i dasNov3.JH563077 I 1 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594523 68 + 2414909 I e micMur3.chr32 1613439 65 - 9149476 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e otoGar3.GL873534 11062142 0 + 30473821 C a score=47210.000000 s hg38.chrUn_KI270749v1 108407 6 + 158759 GTG---CAC s panTro5.chr3 201995623 6 - 202621043 GTG---CAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763658 6 - 205426864 GTG---CAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580746 6 + 86207423 GTG---CAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063537 6 + 204787373 GTG---CAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995381 6 - 192460366 GTG---CAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107347 6 - 17224310 GTG---CAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419531 6 - 41321030 GTG---CAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491006 6 - 101219884 GTG---CAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876972 6 - 924385 GTG---CAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717976 6 - 10587913 GTG---CAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053121 6 - 98464013 GTG---CAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724710 9 + 27742158 ACATATCAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262149 6 - 4835464 GTG---CAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721056 6 + 4093027 GTG---CAC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11062142 2 + 30473821 -----CC-- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768570 6 - 149736546 GAG---CAC i mm10.chr6 I 1 I 23 s canFam3.chr20 16599658 6 + 58134056 GTG---TAC i canFam3.chr20 C 0 I 23 s dasNov3.JH563077 1835742 6 - 2187301 GTA---CAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e proCoq1.NW_012148064v1 594523 68 + 2414909 I e micMur3.chr32 1613439 65 - 9149476 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=79531.000000 s hg38.chrUn_KI270749v1 108413 8 + 158759 -----------------------ATATGTGC s panTro5.chr3 201995629 8 - 202621043 -----------------------ATATGTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763664 8 - 205426864 -----------------------ATATGTGT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580752 8 + 86207423 -----------------------ATATGTGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063543 8 + 204787373 -----------------------ATATGTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995387 8 - 192460366 -----------------------ATATGTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107353 8 - 17224310 -----------------------ATATGTGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419537 8 - 41321030 -----------------------ATATGTGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491012 8 - 101219884 -----------------------ATACGTGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876978 8 - 924385 -----------------------ATATGTGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717982 8 - 10587913 -----------------------ATATGTGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053127 8 - 98464013 -----------------------ATATTTGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724719 8 + 27742158 -----------------------GTATGTGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262155 8 - 4835464 -----------------------GTATGTGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721062 8 + 4093027 -----------------------GTATGTGT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 594591 8 + 2414909 -----------------------ATATATGT i proCoq1.NW_012148064v1 I 68 C 0 s otoGar3.GL873534 11062144 8 + 30473821 -----------------------ATAAACGT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768599 8 - 149736546 -----------------------TTATTTTT i mm10.chr6 I 23 C 0 s canFam3.chr20 16599687 8 + 58134056 -----------------------AGACGCGT i canFam3.chr20 I 23 C 0 s dasNov3.JH563077 1835748 31 - 2187301 ACTAAATAATAGAAGCCAATGTCATATGTAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e micMur3.chr32 1613439 65 - 9149476 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=389024.000000 s hg38.chrUn_KI270749v1 108421 27 + 158759 TCACGTTAACAACATCA-----TACTTTGGAG s panTro5.chr3 201995637 24 - 202621043 TCACGTT---AACATCA-----TACTTTGGAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763672 27 - 205426864 TCACGTTAACAACATCA-----TACTTTGGAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580760 27 + 86207423 TCACTTTAACAACATCA-----TGCTTTGGAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063551 27 + 204787373 TCACTGTAACAACATCA-----TACTTTGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995395 27 - 192460366 TCACTGTAACAACATCA-----TACTTTGGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107361 27 - 17224310 TCACTGTAACAACATCA-----TACTTTGGAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419545 27 - 41321030 TCACTGTAACAACATCA-----TACTTTGGAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491020 27 - 101219884 TCACTTTAACAACATCA-----TACTTTGGAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876986 27 - 924385 TCACTGTAACAACATCA-----TACTTTGGAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717990 27 - 10587913 TAACTTTAACAACATCA-----TACTTTGGAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053135 27 - 98464013 TCACTTTAACAACATCA-----TACTTTGGAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724727 27 + 27742158 TCACTTTAACAACATCA-----TACTTTGGAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262163 27 - 4835464 TCACTTTAACAACATCA-----TACTTTGGAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721070 27 + 4093027 TCACTTTAACAACATCA-----TACTTTGGAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1613504 27 - 9149476 TCACTTTAACAACATCA-----TACTTTGGAG i micMur3.chr32 I 65 I 2600 s proCoq1.NW_012148064v1 594599 27 + 2414909 TCACTTTAACAACATCA-----TACTTTGGAG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11062152 32 + 30473821 TCACTTTAACAGCTTCATATACTATTCCAGAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768607 26 - 149736546 TTACTGAAACAGACTCA-----TTCATAGGG- i mm10.chr6 C 0 C 0 s canFam3.chr20 16599695 27 + 58134056 TCACTTTAACAATACCA-----TACTTTGGAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835779 25 - 2187301 TCACTTT--TAACATCA-----TATTTTGGAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 22777 1041 + 635616 I e eulMac1.LGHX01000499v1 22641 1041 + 631505 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=459730.000000 s hg38.chrUn_KI270749v1 108448 32 + 158759 GTACTT---AA---CATAAAAGAGGAAATAGTTCTTTA s panTro5.chr3 201995661 32 - 202621043 GTACTT---AA---CATAAAAGACGAAATAGTTCTTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763699 32 - 205426864 GTACTT---AA---CATAAAAGACGAAATAGTTCTTTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580787 32 + 86207423 GTACTT---AA---CATAAAAGATGAAATAGTTCTTTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063578 32 + 204787373 GTACTT---AA---CATAAAAGATGAAATAGTTCTTTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995422 32 - 192460366 GTACTT---AA---CATAAAAGATGAAATAGTTCTTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107388 32 - 17224310 GTACTT---AA---CATAAAAGATGAAATAGTTCTTTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419572 32 - 41321030 GTACTT---AA---CATAAAAGATGAAATAGTTCTTTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491047 32 - 101219884 GTACTT---AA---CATAAAAGATGAAATAGTTCTTTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 877013 32 - 924385 GTACTT---AA---CATAAAAGATGAAATAGTTCTTTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6718017 32 - 10587913 GTACTT---AA---CATAAAAGATGAAATAGTTCTTTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053162 32 - 98464013 GTACTT---AA---CATAAAAAATGAAATATTTCTTTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724754 32 + 27742158 GTACTT---AA---CATAAATGATGAAATATTTCTTTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262190 32 - 4835464 GTACTT---AA---CATAAAAGATGAAATATTTCTTTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721097 32 + 4093027 GTACTT---AA---CATAAAAGATGAAATATTTCTTTA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 594626 32 + 2414909 ACAGTT---AA---TATAAAAGGCGAAATAGCTCTTTA i proCoq1.NW_012148064v1 C 0 I 7333 s eulMac1.LGHX01000499v1 23682 32 + 631505 ATAGTT---AC---TATAAAAGGGGAAATAGCTCTTTA i eulMac1.LGHX01000499v1 I 1041 C 0 s eulFla1.LGHW01000501v1 23818 32 + 635616 ATAGTT---AC---TATAAAAGGGGAAATAGCTCTTTA i eulFla1.LGHW01000501v1 I 1041 C 0 s otoGar3.GL873534 11062184 32 + 30473821 ATAGCT---GA---TATCAAAGATGAAATAGCTCTTTA i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45768633 31 - 149736546 ATGGTT---AA---TGTTCA-GATGTATCAGTCCCCTA i mm10.chr6 C 0 C 0 s canFam3.chr20 16599722 35 + 58134056 GTAATTAACAA---CATAAATAATGAATTAGCTGTTTA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835804 35 - 2187301 GTAGCT---AAAACCAGAAAAGGAAAATTAGCTCTTTT i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1613531 2600 - 9149476 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=20807.000000 s hg38.chrUn_KI270749v1 108480 2 + 158759 GA s panTro5.chr3 201995693 2 - 202621043 GA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763731 2 - 205426864 GA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580819 2 + 86207423 GA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063610 2 + 204787373 GA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995454 2 - 192460366 GA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107420 2 - 17224310 GA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419604 2 - 41321030 GA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491079 2 - 101219884 GA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 877045 2 - 924385 GA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6718049 2 - 10587913 GA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053194 2 - 98464013 GA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724786 2 + 27742158 GA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262222 2 - 4835464 GA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721129 2 + 4093027 GA i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 23714 2 + 631505 GA i eulMac1.LGHX01000499v1 C 0 I 4271 s eulFla1.LGHW01000501v1 23850 2 + 635616 GA i eulFla1.LGHW01000501v1 C 0 I 4273 s otoGar3.GL873534 11062217 1 + 30473821 G- i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45768664 2 - 149736546 CA i mm10.chr6 C 0 C 0 s canFam3.chr20 16599757 2 + 58134056 GG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835839 2 - 2187301 GG i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 594658 7333 + 2414909 I e micMur3.chr32 1613531 2600 - 9149476 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=195452.000000 s hg38.chrUn_KI270749v1 108482 23 + 158759 AGATAAAACTCTCAGTGTAGGAC s panTro5.chr3 201995695 23 - 202621043 AGATAAAACTCTCAGTGTAGGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763733 23 - 205426864 AGATAAAACTCTCAGTGTAGGAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580821 23 + 86207423 AGATAAAACACTCAGTGTAGGAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063612 23 + 204787373 AGATAAAACTCCCAAGGTAAGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995456 23 - 192460366 AGATAAAACTCCCAAGGTAAGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107422 23 - 17224310 AGATAAAACTCCCAAGGTAAGGC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419606 23 - 41321030 AGATAAAACTCCCAAGGTAAGGC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491081 23 - 101219884 AGATAAAACTCCCAAGGTAAGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 877047 23 - 924385 AGATAAAACTCCCAAGGTAAGGC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6718051 23 - 10587913 AGATAAAACTCCCAAGGAAAGAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053196 23 - 98464013 AGATAAAATGCTTGATGTAGGAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724788 23 + 27742158 AGATAAAAAGCTAAATTTAGGAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262224 23 - 4835464 AGATAAAATGCTTAATGTAGGAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721131 23 + 4093027 AGATAAAACACTTAATGTAGGAC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11062218 23 + 30473821 AGATGAGAATCTCAAGGCAGGAC i otoGar3.GL873534 C 0 I 3768 s mm10.chr6 45768666 23 - 149736546 AGATTAGAATATCAGTTCAGGAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16599759 21 + 58134056 AGAGTAGAAGCTCAATCTAGG-- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1835841 23 - 2187301 AGAGTAGAATCTCAGTCTAGGAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e proCoq1.NW_012148064v1 594658 7333 + 2414909 I e micMur3.chr32 1613531 2600 - 9149476 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=1371470.000000 s hg38.chrUn_KI270749v1 108505 146 + 158759 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTCCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------TGCTTATAGTGAGGCTAGAAGATGATAT---GAGGTCTAAGCAATATTCTTAAAGGAAATTTGGACCTCTGCTACACATTAC-- s panTro5.chr3 201995718 144 - 202621043 ATCTGATTTTTAAT-ATTTTCTTTTCTAGTTAAGTCCTAAAACCATCAAATGACTGCAGTTCTCAATT--------------------------TGCTTATAGTGAGGCTAGAAGATGATAT---GAGGTCTAAGCAATATTCTTAAAGGAAATTTGGACCTCTGCT--ACATTAC-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763756 144 - 205426864 ATCTGATTTTTAAT-ATTTTCTTTTCTAGTTAAGTCCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------TGCTTATAGTGAGGCTAGAAGATGATAT---GAGGTCTAAGCAATATTCTTAAAGGAAATTTGGACCTCTGCT--ACATTAC-- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580844 144 + 86207423 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTCCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CACTTATAGTGAGGCTAGAAAATGATAT---GAGGTCTCAGCAATATTCTTAAAGGAAATTTGGACCTCTGCT--ACATTAC-- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063635 144 + 204787373 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGTTTACAGTGAGGCTAGAAGATGATGT---GAGGTCTAAGTAATATTCTTAAAGGAAATTTGGACTTCTGCT--ACATTGC-- i rheMac8.chr2 C 0 I 2 s macFas5.chr2 60995479 144 - 192460366 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGTTTACAGTGAGGCTAGAAGATGATGT---GAGGTCTAAGTAATATTCTTAAAGGAAATTTGGACTTCTGCT--ACATTGC-- i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11107445 144 - 17224310 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGTTTACAGTGAGGCTAGAAGATGATGT---GAGGTCTAAGTAATATTCTTAAAGGAAATTTGGACTTCTGCT--ACATTGC-- i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17419629 144 - 41321030 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGTTTACAGTGAGGCTAGAAGATGATGT---GAGGTCTAAATAATATTCTTAAAGGAAATTTGGACTTCTGCT--ACATTGC-- i cerAty1.NW_012009469v1 C 0 I 2 s chlSab2.chr22 64491104 144 - 101219884 ACCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------TGCTTACAGTGAGGCTAGAAGATGATAT---GAGGTCTAAGCAATATTATTAAAGGAAATTTGGACTTCTGCC--ACATTGC-- i chlSab2.chr22 C 0 I 2 s manLeu1.NW_012098965v1 877070 144 - 924385 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CATTTACAGTGAGGATAGAAGATGATGT---GAAGTCTAAATAATATTCTTAAAGGAAATTTGGACTTCTGCT--ACATTGC-- i manLeu1.NW_012098965v1 C 0 I 2 s colAng1.NW_012114711v1 6718074 144 - 10587913 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGCTTACAGTGAGGCTAGAAGATGATGT---GAGGTCTAAGCAATATTCTTAAAGGAAATTTGGACTTCTGCT--ACATTGC-- i colAng1.NW_012114711v1 C 0 I 2 s calJac3.chr15 46053219 145 - 98464013 ATCTGATTTTCAGTAATTTTCTTTTCTTGTTAAGTCCTCAAACCATCAAATGATTGCAGTTCTCACTT--------------------------TGATTATGGTAAGTCTAGAAGATGATGT---GAGGTCTAAGCAATATTTTTAAAGAAAATTTCGGCCTCTGTT--ACCTTAC-- i calJac3.chr15 C 0 I 2 s saiBol1.JH378125 27724811 143 + 27742158 ATCTGATTTTCAAT-ATTTTCTTTTC-TGTTAAGTCATCAAACCATCAAATGATTGCAGTTCTCAATT--------------------------AGATTATGGTGAGTCTAGAAGACGATGT---GAGGGCTAAGCAATATTCTTAAAGAAAATTTTGGCCTCTGTG--ACCTTAC-- i saiBol1.JH378125 C 0 I 2 s cebCap1.NW_016107467v1 262247 144 - 4835464 ATCTGATTTTCAAT-GTTTTCTTTTCTTGTTAAGTCCTCAAACCATCAAATGACTGCAGTTTTCAATT--------------------------CGATTATGGTGAGTCTAGAAGATGATGT---GAGGGCTAAGCAATATTCTTAAAGAAAATTTTGGCCTCTGTG--ACCTTAC-- i cebCap1.NW_016107467v1 C 0 I 2 s aotNan1.NW_018502033v1 3721154 142 + 4093027 ATCTGATTTTCAAT-ATTTTCTTTTCTTGTTAAGTCCTCAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGATTATGGTGAGTCTAGAAGACGATGT---GAGGGCTAAGCAATATTCTTAAAGAAAATTTTGGC--CTGTT--ACCTTAC-- i aotNan1.NW_018502033v1 C 0 I 2 s otoGar3.GL873534 11066009 107 + 30473821 ATCTGATCTTCAAT-GTTT--GTTTCTAATTAAATCCTAAAATCATCAAATGATTGTATTTGCCAAAT--------------------------TGCCTAA--------------------------------------ATTCTTACTAGAAACTGTGGCCTTTGCC--ATATTAC-- i otoGar3.GL873534 I 3768 I 1 s mm10.chr6 45768689 123 - 149736546 -------ATTTAAT-GTTT------CTCTTTAAATCTTAACATTAGCAAATGGCTATATTTTTCAATT--------------------------TTCCATGAATTAAG---GAAGATATTCTAGGAAGTTATTACCAATATCCTTAAA--------TGTTCATTACT--GTATTAC-- i mm10.chr6 C 0 I 2 s canFam3.chr20 16599780 163 + 58134056 -TCTGATTTTTAAT-ATTTTTTCTCTAT----AATCCTAAAATGATCAAATGATTTTACTATTCAAATTTTAA--GATTAAAACTAATACATTATGCCTATAATGAGAGCAGAAGACACTGG---GAGGTCTTAGCAATATGCTTAAAGAAAATGTTGGCCTTTACT--ACATTAT-- i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1835864 166 - 2187301 ATCTGACTTTCAAT-TTTTTTTCTTC-----ACATACTTAGGTCATCAAATGATTGCATTTTTCAATTTTTTACTAAATAAAATTGACACATTAACCTTGCCTTGAGAGAAAACAACCCTGG---GAAGCCTTAGCAGTAGTCTGAAAGGTAGTAT-GACCTTTTAT--ACATTAATC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e proCoq1.NW_012148064v1 594658 7333 + 2414909 I e micMur3.chr32 1613531 2600 - 9149476 I e rhiRox1.KN296641v1 1376672 580 - 1467263 I e papAnu3.chr2 59554179 1064 + 187378091 I e nasLar1.chr2 57725658 1066 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231088 404 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=25853.000000 s hg38.chrUn_KI270749v1 108651 2 + 158759 AT s panTro5.chr3 201995862 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763900 2 - 205426864 AT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580988 2 + 86207423 AT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063781 2 + 204787373 AC i rheMac8.chr2 I 2 C 0 s macFas5.chr2 60995625 2 - 192460366 AC i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11107591 2 - 17224310 AC i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17419775 2 - 41321030 AC i cerAty1.NW_012009469v1 I 2 C 0 s papAnu3.chr2 59555243 2 + 187378091 AC i papAnu3.chr2 I 1064 I 1447 s chlSab2.chr22 64491250 2 - 101219884 AC i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 877216 2 - 924385 AC i manLeu1.NW_012098965v1 I 2 C 0 s nasLar1.chr2 57726724 2 + 181502896 AC i nasLar1.chr2 I 1066 I 1442 s colAng1.NW_012114711v1 6718220 2 - 10587913 AC i colAng1.NW_012114711v1 I 2 C 0 s rhiRox1.KN296641v1 1377252 2 - 1467263 AC i rhiRox1.KN296641v1 I 580 I 1440 s rhiBie1.NW_016820128v1 1231492 2 - 2311269 AC i rhiBie1.NW_016820128v1 I 404 I 206 s calJac3.chr15 46053366 2 - 98464013 AT i calJac3.chr15 I 2 C 0 s saiBol1.JH378125 27724956 2 + 27742158 AT i saiBol1.JH378125 I 2 C 0 s cebCap1.NW_016107467v1 262393 2 - 4835464 AT i cebCap1.NW_016107467v1 I 2 C 0 s aotNan1.NW_018502033v1 3721298 2 + 4093027 AT i aotNan1.NW_018502033v1 I 2 C 0 s otoGar3.GL873534 11066117 2 + 30473821 AG i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45768814 2 - 149736546 GC i mm10.chr6 I 2 C 0 s canFam3.chr20 16599945 2 + 58134056 AC i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1836030 2 - 2187301 AC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e proCoq1.NW_012148064v1 594658 7333 + 2414909 I e micMur3.chr32 1613531 2600 - 9149476 I e ponAbe2.chr3 69651981 2471 + 202140232 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=589251.000000 s hg38.chrUn_KI270749v1 108653 47 + 158759 CATGCTCACACATCACTTTAGGAAAAGTTAAAAGAGTTATAAC-AAA----A s panTro5.chr3 201995864 47 - 202621043 CATGCTCACACATCACTTTAGGAAAAGTTAAAAGAGTTATAAC-AAA----A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763902 47 - 205426864 CATGCTCACACATCACTTTAGGAAAAGTTAAAAGAGTTATAAC-AAA----A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580990 46 + 86207423 CATGCTCACACATCACTTT-GGGAAAGTTAAAAGAGTTATAAC-AGA----A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063783 46 + 204787373 CATGCTCACACATCTC-TTAGGAAAGGTTAAAGGAGTTATAAC-AAA----A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995627 47 - 192460366 CATGCTCACACATCTCTTTAGGAAAGGTTAAAGGAGTTATAAC-AAA----A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107593 47 - 17224310 CATGCTCACACATCTCTTTAGGAAAGGTTAAAGGAGTTATAAC-AAA----A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419777 47 - 41321030 CATGCTCACACATCTCTTTAGGAAAGGTTAAAAGAGTTATAAC-AAA----A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491252 47 - 101219884 CATGCTCACACATCTCTTTAGGAAAAGTTAAAAGAGTTATAAC-AAA----A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 877218 47 - 924385 CATGCTCACACATCTCTTTAGGAAAGGTTAAAAGAGTTATAAC-AAA----A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6718222 47 - 10587913 CATGCTCACACATCTCTTTAGGAAAAGTTAAAAGAGTTATAAC-AAA----A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053368 47 - 98464013 GATGCTCACACATCTCTTTAGGAAAAGTTAAAAGAGTTATAAC-AAA----A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724958 47 + 27742158 CATGCTCACACATCTCTTTAGGAAAAGTAAAAAGAGTAATAAC-AAA----A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262395 47 - 4835464 CATGTTCACACATCTCTTCAGGAAAAGTTAAAAGAGTAATAAC-AAA----A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721300 47 + 4093027 CATGCTCACACATCTCTTTAGGAAAAGTTAAAAGAGTAATAAC-AAA----A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1616131 52 - 9149476 CATGGTCACACGTCTCTTTAGGGAAATTTAAGAGAGTTATAACAAAAGAATA i micMur3.chr32 I 2600 C 0 s otoGar3.GL873534 11066119 51 + 30473821 CATGATCACACATCTCTTTAAGGAAATTTAAGAGAGCTATAAC-AAAGAATA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45768816 43 - 149736546 CATGTTCA----TTGTTTTAGAAAAACAGAAGAGATTTATTGC-AAA----A i mm10.chr6 C 0 I 410 s canFam3.chr20 16599947 47 + 58134056 CATGCTCATATATCCTTTCAGTAAAATTTAAGAGAACTATAAT-AAA----G i canFam3.chr20 C 0 I 4 s dasNov3.JH563077 1836032 47 - 2187301 GATGCTCACACATTCTTTTAGTAAAATTCAATATAGCTGTAAC-AAA----G i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e proCoq1.NW_012148064v1 594658 7333 + 2414909 I e rhiRox1.KN296641v1 1377254 1440 - 1467263 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231494 206 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=161551.000000 s hg38.chrUn_KI270749v1 108700 16 + 158759 ----ATATTTT---ATA----CTTTGA s panTro5.chr3 201995911 16 - 202621043 ----ATATTTT---ATA----CTTTGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763949 16 - 205426864 ----ATATTTT---ATA----CTTTGA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67581036 16 + 86207423 ----ATATTTT---ATA----CTTTGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063829 16 + 204787373 ----AAATTTT---ATA----GTTTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995674 16 - 192460366 ----AAATTTT---ATA----GTTTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107640 16 - 17224310 ----AAATTTT---ATA----GTTTAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419824 16 - 41321030 ----AAATTTT---ATA----CTTTAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491299 16 - 101219884 ----AAATTTT---ATA----CTTTAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 877265 16 - 924385 ----AAATTTT---ATA----CTTTAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6718269 16 - 10587913 ----AAATTTT---ATA----CTTTAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053415 16 - 98464013 ----ATATTTT---ATA----CTTTAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27725005 16 + 27742158 ----ATATGTT---ATA----CTTTAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262442 16 - 4835464 ----ATATGTT---ATG----CTTTAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721347 16 + 4093027 ----ATATTTT---ATA----CTTTAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1616183 16 - 9149476 ----ATATTTT---ATA----CTTTAT i micMur3.chr32 C 0 I 5 s otoGar3.GL873534 11066170 19 + 30473821 ----ATTTTTTTACTTA----CTTTAT i otoGar3.GL873534 C 0 I 5 s mm10.chr6 45769269 16 - 149736546 ----ATTTGTT---CTT----CTTTGA i mm10.chr6 I 410 I 3 s canFam3.chr20 16599998 20 + 58134056 ----ATATTTT---ACATGTTCTTTAT i canFam3.chr20 I 4 I 5 s dasNov3.JH563077 1836079 20 - 2187301 AATAGTATTTT---ATA----TTTCCA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e proCoq1.NW_012148064v1 594658 7333 + 2414909 I e rhiRox1.KN296641v1 1377254 1440 - 1467263 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231494 206 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=1824878.000000 s hg38.chrUn_KI270749v1 108716 143 + 158759 --------TAAACATAAATTTTCAGAACTGAATTATAACTATTGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACACCAA-G-------GTCATGGTCAT-----TTTAATGAAAA-TAA--GTAAATAAATAAACACTAGC-------AG-A-AAAATATGGTCAG s panTro5.chr3 201995927 143 - 202621043 --------TAAACATAAATTTTCAGAACTGAATTATAACTATTGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACATCAA-G-------GTCATGGTCAT-----TTTAATGAAAA-TAA--GTAAATAAATAAACACTAGC-------AG-A-AAAATATGGTCAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763965 143 - 205426864 --------TAAACATAAATTTTCAGAACTGAATTATAACTATTGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACACCAA-G-------GTCATGGTCAT-----TTTAATGAAAA-TAA--GTAAATAAATAAACACTAGC-------AG-A-AAAATATGGTCAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67581052 143 + 86207423 --------TAAACATAAATTTTCAGAACTGAATTATAGCTATCGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACACCAA-G-------GTCATGGTCAT-----TTTAATGAAAA-TAA--GTAAATAAATAAACACTAGC-------AG-A-AAAATATAGTCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063845 143 + 204787373 --------CAAACATACATTTTCAGAACTGAATTGTAACTATTGCATTCCAAATGAATTTTCTGTATGCATTACTGA-TTTTAACTCTAA-G-------GTCATGGTCAT-----TTTGATGAAAA-TAA--GTAAATAAATAAGCATTAGC-------AG-A-AAAATATGGTCAG i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60995690 143 - 192460366 --------CAAACATACATTTTCAGAACTGAATTGTAACTATTGCATTCCAAATGAATTTTCTGTATGCATTACTGA-TTTTAACTCTAA-G-------GTCATGGTCAT-----TTTGATGAAAA-TAA--GTAAATAAATAAGCATTAGC-------AG-A-AAAATATGGTCAG i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11107656 143 - 17224310 --------CAAACATACATTTTCAGAACTGAATTGTAACTATTGCATTCCAAATGAATTTTCTGTATGCATTACTGA-TTTTAACTCTAA-G-------GTCATGGTCAT-----TTTGATGAAAA-TAA--GTAAATAAATAAGCATTAGC-------AG-A-AAAATATGGTCAG i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17419840 143 - 41321030 --------CAAACATACATTTTCAGAACTGAATTGTAACTATTGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACTCTAA-G-------GTCATGGTCAT-----TTTGATGAAAA-TAA--GTAAATAAATAAGCATTAGC-------AG-A-AAAATATGGTCAG i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64491315 144 - 101219884 --------TAAACATATATTTTCAGAACTGAATTGTAACTATTGCATTCTGAACGAATTTTCTGTATACATTACTGA-TTTTAGCACCAA-G-------GTCATGGTCAT-----TTTGATGAAAA-TAA--GTAAATAAATAAACATTAGC-------AGAA-AAAATATGGTCAG i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 877281 143 - 924385 --------CAAACATACATTTTCAGAACTGAATTGTAACCATTGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACTCTAA-G-------GTCATGGTCAT-----TTTGATGAAAA-TAA--GTAAATAAATAAGCATTAGC-------AG-A-AAAATATGGTCAG i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6718285 143 - 10587913 --------TAAACATACATTTTCAGAACTGAATTGTAACTATTGCATTCCAAATGAATTTTCTGTATACATTACCGA-TTTTAGCACCAA-G-------GTCATGGTCAT-----TTTGATGAAAA-TAA--GTAAATAAATAAACATTAGC-------AG-A-AAAATATGGTCAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053431 143 - 98464013 --------TAAACATAAATTTGTAGCACTTAATCGTAACTATGGCATTCCAAATGAATTTTCTGTATATATCACTGA-TTCTAACATAAA-G-------ATCATGGTCAT-----ATTGATGAAAA-TAA--GTAAATAAATAAATACTAGC-------AG-A-AAAATATAGTCAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27725021 140 + 27742158 --------TAAACATAAATTTTTAGAACTTAATTGTAACTATGGCATTCCAAATGAATTTTCTGTATATATTACTGC-TTTTAACACCAA-G-------GTCATGGTCAT-----ATTGATGAAAA-TAA--GTAAATAACTAAGTACTAGC-------AG-A-AAAAT---GTCAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262458 141 - 4835464 --------TAAACATAAATTTTTAGAACTTAATTGTAACTATGGCATTCCAAATGAATTTTCTGTGTATATTACTGATTTTTAACACCAA-G-------GTCACGGTCAT-----ATTGATGAaaa-taa--gtaaataaataaataCTAGC-------AG-A-AAAAT---GTCAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721363 140 + 4093027 --------TAAACATAAATTTTTAGAACTTAATTGTAACTATGGCATTCCAAACGAATTTTCTGTATATATTACTGA-TTTTAACACCAA-G-------GTCATGGTCAT-----ATTGATGAaaa-taa--gtaaataaataaataCTAGC-------AG-A-AAAAT---GTCAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1616204 141 - 9149476 --------TAAACATAAATTCTCAGAACTGAATTATAATGATTGCATTCCAAATGAATTTTCTGTATATACTACTCA-TTTAAATGCCCA-G-------GTAATCGTCAT-----TTTGATGAAAA-TAA---TAAATAAATAAACACTAGT-------AG---AAAATACAATCAG i micMur3.chr32 I 5 C 0 s proCoq1.NW_012148064v1 601991 141 + 2414909 --------TAAACATAAAGTCTCAGAACTAAATTATAACGACTGCATTCCAAATGAATTTTCTGTATATATTATTGA-TTTTAACACCAA-G-------GTAATGGTAAT-----TTTGATGAAAA-TAA---TAAATAAATAAACACTAGT-------AG---GAAATACGATCAG i proCoq1.NW_012148064v1 I 7333 C 0 s otoGar3.GL873534 11066194 133 + 30473821 --------TTAGCATAAATTCTCGGACCTGAAT---------TGCATTCCAAATAAATTTTATGTGCACATTATTGA-TTCTAACACCAT-G-------GTAATAGCCAT-----GTAGATGAAAA-TAA--GTAAATAAATGAAAACTAAC-------AC---AAAATAAAGTCAG i otoGar3.GL873534 I 5 C 0 s mm10.chr6 45769288 146 - 149736546 --------TAAACATAACCTTTCAGAATTGAGA-------ATCAGATGGTAAATAAATAGTATTTGT--ATCATTGA-CTTTCGAACCAA-AGTAACATGTAACAGTCATGTTCCATTCATGAAAACTAA--CAAAAGAAAGAAAAAGGAGC-------AG-AGAAAACGCTGTT-- i mm10.chr6 I 3 C 0 s canFam3.chr20 16600023 152 + 58134056 --------TAAACATAAATTTTCAGAACTCAATTATACCTATAGCATTCCAAATGAATTTTCTGTGTATGTCATTAA-TTTTAACACCAA-G-------GCACTGATCAT-----TTTGacacaca-cacacacacacacacaAAAGTTAATAAATTTAAG-A-GAAATCTAGTCAA i canFam3.chr20 I 5 C 0 s dasNov3.JH563077 1836099 146 - 2187301 TATTAATTTAAACAAAAAGGTTCAGAACTGAAATATAAC--TTGTATCCCAAATGAATTTTCTATGTAAGTTATTGA-TTTTAACATCAACA-------GTGATGATTAT-----TTTGTCAAAAA-TAA------CTAAATAAAAACAAGA-------AG-G-AAAATTCAATCAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e rhiRox1.KN296641v1 1377254 1440 - 1467263 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231494 206 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=6392.000000 s hg38.chrUn_KI270749v1 108859 1 + 158759 A s panTro5.chr3 201996070 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204764108 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67581195 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063989 1 + 204787373 A i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60995834 1 - 192460366 A i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11107800 1 - 17224310 A i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17419984 1 - 41321030 A i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64491460 1 - 101219884 A i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 877425 1 - 924385 A i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6718428 1 - 10587913 A i colAng1.NW_012114711v1 C 0 I 1 s rhiBie1.NW_016820128v1 1231700 1 - 2311269 A i rhiBie1.NW_016820128v1 I 206 I 81 s mm10.chr6 45769434 1 - 149736546 G i mm10.chr6 C 0 C 0 s canFam3.chr20 16600175 1 + 58134056 G i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1836245 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e proCoq1.NW_012148064v1 602132 0 + 2414909 C e micMur3.chr32 1616345 0 - 9149476 C e rhiRox1.KN296641v1 1377254 1440 - 1467263 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e tarSyr2.KE939134v1 175632 1693 + 958716 I e otoGar3.GL873534 11066327 0 + 30473821 C e aotNan1.NW_018502033v1 3721503 0 + 4093027 C e cebCap1.NW_016107467v1 262599 0 - 4835464 C e saiBol1.JH378125 27725161 0 + 27742158 C e calJac3.chr15 46053574 0 - 98464013 C a score=1096784.000000 s hg38.chrUn_KI270749v1 108860 77 + 158759 AAAAAGGAGAAT-AAAACCTGCATCTGAATTTCAGTTGATAATGGGCTATTTAATAACTACCAGTACACAGCTCTGCA s panTro5.chr3 201996071 77 - 202621043 AAAAAGGAGAAT-AAAATCTGCATCTGAATTTCAGTTGATAATGGGCTATTTAATAACTACCAGTACACAGCTCTGCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204764109 77 - 205426864 AAAAAGGAGAAT-AAAATCTGCATCTGAATTTCAGTTGATAATGGGCTATTTAATAACTACCAGTACACAGCTCTGCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67581196 77 + 86207423 AAAAAGGAGAAT-AAAACCTGCATCCAAATTTCAGTTGATAATGGGCTATTTAATAACTATCAATACACAGCTCTGCA i nomLeu3.chr21 C 0 I 2167 s rheMac8.chr2 66063990 78 + 204787373 AAAAAGGAGAATAAAAACCTGCGTCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995835 78 - 192460366 AAAAAGGAGAATAAAAACCTGCGTCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACATAGCTCTGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107801 78 - 17224310 AAAAAGGAGAATAAAAACCTGCGTCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419985 78 - 41321030 AAAAAGGAGAATAAAAACCTGCGTCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491461 77 - 101219884 AAAAAGGAGAAT-AAAACCTGCATCTGAATTTCAGTTGATAATGGGCGATTTAATAACTATCAGTACACAGCTCTGCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 877426 78 - 924385 AAAAAGGAGAATAAAAACCTGCATCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6718430 77 - 10587913 AAAAAGGAGAAT-AGAACCTGCATCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46053574 77 - 98464013 AAAAAGGAGAAT-AAAACCTCCCTCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27725161 77 + 27742158 AAAAAGGAGAAC-AAAACCTCCCTCTGAATTTCAGTTGATAATGGGTTATTTAATAGCTATCAGTACACAGCTCTGCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262599 77 - 4835464 AAAAAGGAGAAC-AAAACCTCCCTCTGAATTTCAGTTGATAATGGTCTGTTTAATAGCTATCAGTACACAGCTCTGCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721503 77 + 4093027 AAAAAGGAGAAC-AAAACCTCCCTCTGAATTTCAGTTGATAATGGGCTATTTAATAGCTATCAGTATACAGCTCTGCA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1616345 74 - 9149476 GAAAAGGAGAAT-AAAACATGCACCTGAATTTCAGTTGATCATGGACTATTTAA---CTGTTGGTACACAGTTCTGCA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 602132 74 + 2414909 AAAAAGGAGAAT-AAAACCTACATCTGAATTTCAGTTGATCATGGACTATTTAA---CTATTGGTACACAGCTCTGCA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11066327 73 + 30473821 -AAAAGGAGAAT-AAAATCTGCATCTGATTTTCAGGTGATAATGGACTAATTAA---CTATTGGTACACAGCTCTGCC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45769435 67 - 149736546 AGAACAGTGAGG-AAAACCTTCAATTAAATTTAAGTTGGTTGTG-------TAACGCCTGCCAGCG---AGTTTTGTG i mm10.chr6 C 0 I 1 s canFam3.chr20 16600176 75 + 58134056 -GAAAAAAGAAC-AGAGCCTGCAATTAAATTTTAGTTGATAATGGGCTATTTAATAACTAT-GTTATGCAGCTATGCA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1836246 76 - 2187301 -AAAAGGAGAAT-AAAACCTGCATTGAAATTTCAGCTGATAATGTGCTATTTAACAACTATGGATACACAGCTATGAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e rhiRox1.KN296641v1 1377254 1440 - 1467263 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231701 81 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=34188.000000 s hg38.chrUn_KI270749v1 108937 3 + 158759 GGG s panTro5.chr3 201996148 3 - 202621043 GGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204764186 3 - 205426864 GGG i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66064068 3 + 204787373 GGG i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60995913 3 - 192460366 GGG i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11107879 3 - 17224310 GGG i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17420063 3 - 41321030 GGG i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64491538 3 - 101219884 GGG i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 877504 3 - 924385 GGG i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6718507 3 - 10587913 GGG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053651 3 - 98464013 GGG i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27725238 3 + 27742158 GGG i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 262676 3 - 4835464 GGG i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3721580 3 + 4093027 GGG i aotNan1.NW_018502033v1 C 0 I 1 s micMur3.chr32 1616419 3 - 9149476 GGA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 602206 3 + 2414909 GGA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11066400 3 + 30473821 GGG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45769503 2 - 149736546 AG- i mm10.chr6 I 1 C 0 s canFam3.chr20 16600251 2 + 58134056 -GA i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1836322 3 - 2187301 GGA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e rhiRox1.KN296641v1 1377254 1440 - 1467263 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231701 81 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I e nomLeu3.chr21 67581273 2167 + 86207423 I a score=31153.000000 s hg38.chrUn_KI270749v1 108940 2 + 158759 AA s panTro5.chr3 201996151 2 - 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204764189 2 - 205426864 AA i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66064072 2 + 204787373 AA i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60995917 2 - 192460366 AA i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11107883 2 - 17224310 AA i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17420067 2 - 41321030 AA i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64491542 2 - 101219884 AA i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 877508 2 - 924385 AA i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6718510 2 - 10587913 AA i colAng1.NW_012114711v1 C 0 I 2 s rhiBie1.NW_016820128v1 1231782 2 - 2311269 AA i rhiBie1.NW_016820128v1 I 81 I 1150 s calJac3.chr15 46053655 2 - 98464013 AA i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27725242 2 + 27742158 AA i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 262680 2 - 4835464 AA i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3721584 2 + 4093027 AA i aotNan1.NW_018502033v1 I 1 C 0 s micMur3.chr32 1616422 2 - 9149476 AG i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 602209 2 + 2414909 AG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11066403 2 + 30473821 AA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45769505 2 - 149736546 GA i mm10.chr6 C 0 C 0 s canFam3.chr20 16600255 2 + 58134056 AA i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1836325 2 - 2187301 AA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e rhiRox1.KN296641v1 1377254 1440 - 1467263 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e tarSyr2.KE939134v1 175632 1693 + 958716 I e nomLeu3.chr21 67581273 2167 + 86207423 I a score=4736471.000000 s hg38.chrUn_KI270749v1 108942 323 + 158759 AAAGGCA------------------------ATAATTCATGTTAGGTATATCCAGTAACTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTATATAATAT------GTTTAAAATTCTCTTTTTAGTATTCAGATTTTAATGAACTGCAGATCACTGCAATTCTTCATGTTAAATCACATCTGGGATTGTTCCTTAATCAAGT--AAATTGGGTTAAAATATTGCATTTTTATTGTTAGCTTAATAGCTTAAAGAGATATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATTTCTTAGAT s panTro5.chr3 201996153 323 - 202621043 AAAGGCA------------------------ATAATTCATGTTAGGTATATCCAGTACCTAATGATAATTAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATAT------GTTTAAAATTCTCTTTTTAGTATTCAGATTTTAATGAACTGCAGATCACTGCAATTCTTCATGTTAAATCGCATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGATATTAAACGTTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATTTCTTAGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204764191 323 - 205426864 AAAGGCA------------------------ATAATTCATGTTAGGTATATCCAGTACCTAATGATAATTAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATAT------GTTTAAAATTCTCTTTTTAGTATTCAGATTTTAATGAACTGCAGATCACTGCAATTCTTCATGTTAAATCACATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGATATTAAACGTTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATTTCTTAGAT i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66064074 323 + 204787373 AAAGGCA------------------------ATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATAT------GTTTAAAATTCTCTTTCCAGGATTCAGATTTTAATGAAATTCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995919 323 - 192460366 AAAGGCA------------------------ATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATAT------GTTTAAAATTCTCTTTCCAGGATTCAGATTTTAATGAAATTCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107885 323 - 17224310 AAAGGCA------------------------ATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATAT------GTTTAAAATTCTCTTTCCAGGATTCAGATTTTAATGAAATTCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17420069 323 - 41321030 AAAGGCA------------------------ATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATAT------GTTTAAAATTCTCTTTCCAGGATTCAGATTTTAATGAAATTCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTATCTTAATAGCTTAAAGAGGTATTAAATATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491544 323 - 101219884 AAAGGCA------------------------ATAATTCATGTCAGGTGTACCCAGCACCTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAACA-TTTCTTTATGGAAAAGAGGTAAACGAATTTCTTTACATAATGT------GTTTAAAATTCTCTTTCCAGTATTCAGATTTTAACGAAATGCAGATCACTGCAATTCTTCATGTTAAATCACGTCTGAGGTTTTTCCTTAATTGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 877510 323 - 924385 AAAGGCA------------------------ATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACGTGCTTTAAGGAAAATG-AAGATCATA-TTTCTTTATGGAAAAGAGGTAAATGAACTTCTTTACATAATAT------GTTTAAAATTCTCTTTCCAGGATTCAGATTTTAATGAAATTCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAATATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6718514 319 - 10587913 AAAGGCA------------------------ATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACATGCT----GGAAAATG-AAGATAATA-TTTCTTTATGAAAAAAAGGTAAATGAACTTCTTTACATAATAT------GTTTAAAATTCTCTTTCCAGTATTCAGATTTTAATGAAATGCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAAATTGTTCCCTAATTGAGT--AAATTGGGTTAAAATATTGTATTTTTGTTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATATAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i colAng1.NW_012114711v1 I 2 C 0 s calJac3.chr15 46053657 319 - 98464013 AAAGGCA------------------------ATAATTTATGTTAGGTATACCTAGCACCTGATGATAATCAACATGCTTTAAGGGTAAGG-AAGTTAATA-TTTCTTTATGGAAAAG----GAACAAACTTCTTCACATACTAC------AGTTAAAATTCTCTTTCTAGTATTCAAATTTTAATGGCATGCAGATCGCTGCAATTCTTCATGTTAAATCACATCTGGGATTGTTCCTTAATCAAGT--AAATTGGGTTAAAATGTTGCATTTTTATTGCTAGCTTAACAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATGTCTTAGCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27725244 321 + 27742158 AAAGGCA------------------------ATAATTTAAGTTAGGTATACCTAGCACCTAATGATAATCAACATGCTTTAAGGATAATG-AAGATAATA-TTTCTTTATAGAAAAGAGGTAAAGAAACTTCTTAACATAATAT------GATTAAAATTCTCTT--CAGTATTCAAATTTTAATGGAATGCAGATTGCTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCGTTAATTGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGTTTAAAGAGGTATTAAACATTTAATTATTAACCTCGACATGAAAGAATTGGAGAGATGTCTTAACT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262682 323 - 4835464 AAAGGCA------------------------ATAATTTATGTTAGGTATACCTAGCACCTAATGATAATCAACATGCTTTAAGGATAATG-AAGATAATA-TTTCTTTATAGAAAAGAGGTAAACAAACTTCTTCACATAATAT------GGTTAAAATTCTCTTTTTAACATTCAAATTTTAATGGAATGCAGATCGCTGCTATTTTTCATGTTAAATCACATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTCGACATGAAAGAATTGGAGAGATGTCTTAACT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721586 323 + 4093027 AAAGGCA------------------------ATAATTTATGTTAGGTATACCTAGCACCTAATGATAATCAACATGCTTTAAGGATAATG-AAGATAATA-TTTCTTTATAGAAAAGAGGTAAACAAACTTCTTCACATAATAT------GGTTAAAATTCTCTTTCTAGTATTCAAATTTTAATGGAATGCAGATCGCTGCAATTCTTCATGTTAAATCACATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATGTCTTAACT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1616424 353 - 9149476 AAAGGCAATAATGTTATGTATGTTAGGTATTATAATTGATGTTAGGTATAGTCAGCATCTAGTGATAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTCCTTCATTGAAAAGAGCTAAATGAACTTCTTTACATAATATTAATAAGTTTAAAATTCTCTTTCTAGTCCTCAAATTTTAATGAAATGCAGATCACTGCAATTCTTCATGTTAAAGAACATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCACTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATTTCTTAGAT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 602211 329 + 2414909 AAAGGCA------------------------ATAATTCATGTTAGGTATATTCAGCATCTAATGGTAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTCCTTTATTGAAAAGAGCTAAATGAACTTCTTTACATAATATTAAAAAGTTTAAAATTCTCTTTCCAGTCCTCAAATTTTAATGAAATGCAGATCACTACAATTCTTCATGTTAAATAACATCTGGGATTGTTCCTTAATCTAGT--AAATTGGGTTAAAATATTGCACTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGGAGTGATTTCTTAGAT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11066405 323 + 30473821 CAAGGCA------------------------ATAATTCATGTTAGGTGTATTCAGCACCTAATGAATATCAACATGCTTTAAGGAAAATG-AAGATGATA-TTCCTTTATTGAAAAGAACTAAATGAACTTCTTTACATAATAC------ATTTAAAATTCTCTTTCTAGTACTCAAATTTTAATGAAATGCAGAGCACTGCAATTCTTCATGTTAAATAACATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCACTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATAGGAGAGATTTCTTAGAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45769507 316 - 149736546 -AATGGT------------------------AGAAGCCATGTCAGGTGCACACAGTGCTTCCCACTAGGCAATGTACACCAAGGGAAATG-AAGACACTA-TTTGGTTATTGAAAAGGGTCAAATGGGCTTCTT------GCAT------ATTTGAAAGTCTCTTTCTAGCACTCAGATGTTCATGAAATGCAGATCAGTGCAATTCTTCATGTTAAATAACATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGAAGAGATTTCTTGGAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16600257 323 + 58134056 AAATGCA------------------------ATGATTCATAGTAGGTATATCCAACATCTAATGATAATCAACATGCTTTTTGGGAAATG-AGGATAATA-CTCCCTTATTGAAAAGAGTTAAATGAACTTCTTCACATAATAT------GTTTAAAATTCTCTTTCTAGTGTGTAGATTTTAATGAAATGCAGATCACTGCAATTCTTCATGTTAAATAACATCTGGGATTGTTCTTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTACTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATTTCACTGAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1836327 324 - 2187301 AAATGCA------------------------ATAATTCATGTTAGATATAATCAGCATATAATGATAATTAATATGTTTTAAGGGAAATGTAAGATAATAGGCCCTTTATTGAAAATAAGTCAATGAAATTCTTTATATAATAT------GTTTAAAAT--TCTGTCTAATACTCATATTTTAATGAAATGTAGAAAGCTGCAATT-TTCATGTTAAATAACATCTGGGATTGTTCTTTAATTAGATAAAAATTTGGTTAAAATATTGCATTTTTACTGATAGCTTAATAGCTTAAAGAGatattaaatatttaattattaaCCTTGACATGAAAGAATTGGAGAGATTTCTTAGAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e rhiRox1.KN296641v1 1377254 1440 - 1467263 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231784 1150 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I e nomLeu3.chr21 67581273 2167 + 86207423 I a score=2402438.000000 s hg38.chrUn_KI270749v1 109265 167 + 158759 GATTTAAGGATTTGAAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTGGGATAAAGCAAATCTAATGAGCTGTCTTG-AAATGGGCATCTGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAATGTTACTTAAGGAAATCATTCATAGAAGAATAG s panTro5.chr3 201996476 167 - 202621043 GATTTAAGGATTTGAAAGTTCTCTCTTCTGAGTGAAGTTTATATTGTAGGATAAAGCAAATCTAACGAGCTATCCTG-AAATGGGCATCTGAC--TAATTGAAAGAGACTAATAATAGAGCATACAT-----------ATATATCCAATGTTACTTAAGGAAATCATTCATAGAAGAATAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204764514 167 - 205426864 GATTTAAGGATTTGAAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTATCTTG-AAATGGGCATCTGAC--TAATTGAAAGAGACTAATAATAGAGCATACAT-----------ATATATCCAATGTTACTTAAGGAAATCATTCATAGAAGAATAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67583440 167 + 86207423 GATTTAAGGATTTGAAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATATAACGAGCTATCTTG-AAATGGGCATCTGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGAAATCATTCATAGAAGAACAG i nomLeu3.chr21 I 2167 C 0 s rheMac8.chr2 66064397 167 + 204787373 GATTTGAGGATTTGTAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTGTCTTG-AAATGGGCATTGGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGGAATCATTCATAGAAGAATAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60996242 167 - 192460366 GATTTGAGGATTTGTGAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTGTCTTG-AAATGGGCATTGGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGGAATCATTCATAGAAGAATAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11108208 167 - 17224310 GATTTGAGGATTTGTAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTGTCTTG-AAATGGGCATTGGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGGAATCATTCATAGAAGAATAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17420392 167 - 41321030 GATTTGAGGATTTGTAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTATCTTG-AAATGGGCATTGGAC--TAATTGAAAGAGTCTAATAATATAGCATACAT-----------TTATATCCAAAGTTACTTAAGGGAATCATTCATAGAAGAATAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491867 167 - 101219884 GATTTGAGGATTTGTAAGTTCTCTCTTCTGAATGAAGTTTATACGTTAGGATAAAGCAAATCTAATGAGCTATCTTG-AAATGTGCATTTGAC--TAATTGAAAGACACTAATAATATAGCATACAT-----------ACATATCCAATGTTACTTAAGGAAATCATTCATAGAAGAATAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 877833 167 - 924385 GATTTGAAGATTTGTAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTATCTTG-AAATGGGCATTGGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGGAATCATTCATAGAAGAATAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6718833 167 - 10587913 GATTTGAGGATTTGTAAATTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAATGAGCTATCTTG-AAATGGGCATTTGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGAAATCATTCATAGAAGAATAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053976 165 - 98464013 GATTTAAGGATTTGCAAGTTCTCTCTTCTGAGTGAAGTTTGTATGTTAGGATAAAACAAATCTAACAATATATCTTG-AAATAGGCATTTGAC--TAATTGAAAGATACAAATAAAATAACATACAT-----------ATACACCAAACATTACTTTA--AAATCATTCAGAGAAGAATAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27725565 165 + 27742158 GATTTAAGGATTTGCAAGTTCTCTCTTCTGAGTGAAGTTCTTATGTTAGGGTAAAACAAATCTAACAATATATCTTG-AAATGGGCATTTGAC--TAATTGAAAGAGACTAATAAAATAACATACAT-----------ATACATCAAACATTACTTAA--AAATCATTCACAGAAGAATAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 263005 165 - 4835464 GATTTAAGGATTTGCAAGTTCTCTCTTCTGAGTGAAGTTCTTATGTTAGGGTAAAACAAATCTAACAATATATCTTG-AAATGGTCATTTGAC--TAATTGAAAGAGACTAATAAAATAGCATACAT-----------ATACATCAAACATTACTTAA--AAATCATTCAGAGAAGAATAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721909 165 + 4093027 GATTTAAGGATTTACAAGTTCTCTCTTCTGAGTGAAGTTCTTATGTTAGGATAAAACAAATCTAACAATATATCTTG-AAATGGGCATTTGAC--TAATTGAAAGAGACTAATAAAATAGCATACAT-----------ATACATTAAACATTACTTAA--AAATCATTCAGAGAAGAATAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1616777 169 - 9149476 GATTTAAGGATTTAAAAGTTCTCTCTTCTGAGTGAAGTTCATATGCTGGGATAAAGTAGATCTAACTAGCTATCTTG-AAATGGGCATTGGACTTTAATTGAAAGAAACTAATAATATAGCATACAT-----------ATATATCAAACATTACTTGAGGAAATAATTCAGAGGAGAATAG i micMur3.chr32 C 0 I 699 s proCoq1.NW_012148064v1 602540 169 + 2414909 GATTTAAGGATTTAAAAGTTCTCTCCTCTGAGTGAAGTTCATATGCTGGAATAAAGTAGATCTAACTAGCTATCTTG-AAAATGGCATTGGACTTTAATTGAAAGAAACTAATAATATAGCATACAT-----------ATATATCAAACATGACTTGAGGAAATCATTCAGAGGAGAATAG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11066728 169 + 30473821 GATTTAAGGATTTAAAAGTTCTCTCTTCTGAGTGAAGTTCATATGCTAGGATAAGGCAGATCTAACCAGCTATCTTG-AAATGGGCATTTGGCTTTAATTGAAAGAAACTAATAATACAGCATACAT-----------ATATCCCAAACGTTACTTGAGGGAATCATTTGGAGGAGAGTAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45769823 156 - 149736546 GATTTAAGGATTTAAAAGTTCTCTCTTCTGAGTGAAATTCATATGCC-TGATAAAGCAGATCTAACTAGTTATCTTGAAAAAAAGCATTTTACTTTAATTGAAATAAAGTAATAATAATGAAT------------------------AAGTTGCTTGAAGACATCATTCACAGAAGAATGA i mm10.chr6 C 0 C 0 s canFam3.chr20 16600580 176 + 58134056 GATTTAAGGATTTCAAAATTCTCTCTTCTGAGTTAAGTTCATATGTAAGGATGAGATAGCTCTAACTAGCCATCCTG-AAATGGGGGTTTGACCTTAATTGAAAGAAATGCATAACATACCATGTAT----ACAAATGATATGTATAACATTAGTTGAGCAAATCATTCATGGAGGAATAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1836651 180 - 2187301 TATTCAAGAACTTAAAAGTCTTTTCTTCTGAATGAAGTTCATATGCTACAGTAAAGTAGATCTAACCAACCATCCTG-AAATTGGTAGTGGACTTTAATTGAAAGAAATTAATAATACAGCCTAGATTAGAGAGAGAGAGATATCCAACATTATTTGAGGGAATCAATCAGAGAGGAAAAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e rhiRox1.KN296641v1 1377254 1440 - 1467263 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231784 1150 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=1012327.000000 s hg38.chrUn_KI270749v1 109432 97 + 158759 ATGTTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAACTCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCT-AGTAatttactcattc-aa s panTro5.chr3 201996643 97 - 202621043 ATGCTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAAGTCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCT-AGTAatttactcattc-aa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204764681 97 - 205426864 ATGCTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAAGTCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCT-AGTAatttactcattc-aa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67583607 97 + 86207423 ATATTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAACTCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCT-AGTAatttactcattc-aa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66064564 93 + 204787373 ATGTTTTATTTTAAAA--AT-CAACTAATGTATGCTAAATACTAATAAAATCATCATAA---------CTGAATAACAGC------T-TAGCCT-AGTAatttactcattc-aa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60996409 97 - 192460366 ATGTTTTATTTTAAAA--AT-CAACTAATGTATGCTAAATACTAATAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCT-AGTAatttactcattc-aa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11108375 97 - 17224310 ATGTTTTATTTTAAAA--AT-CAACTAATGTATGCTAAATACTAATAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCT-AGTAatttactcattc-aa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17420559 97 - 41321030 ATGTTTTATTTTAAAA--AT-TAACTAATGTATGCTAAATACTAATAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCT-AGCAatttactcattc-aa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64492034 96 - 101219884 ATGTTTTATTTTAAAA--AT-CAACTAATGGATGCTAAATATTAATAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCT-AGTAatttactcattc--a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 878000 97 - 924385 ATGTTTTATTTTAAAA--AT-CAACTAATGTATGCTAAATACTAATAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCT-AGTAatttactcattc-aa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6719000 93 - 10587913 ATGTTTTATTTTAAAA--AT-CAACTAATGGATGCTAAATATTAATAAAATCATCATAA---------CTGAATAAGAGG------T-TAGCCT-AGTAatttactcattc-aa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46054141 97 - 98464013 ATGTTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAAATCACCATAA---------CTGAATAACAGAC--AGGT-TAGTCT-AGTGattcactcattc-ac i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27725730 98 + 27742158 ATGTTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAACAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAACCT-AGTGattcactcattcaaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 263170 98 - 4835464 ATGTTTTATTTTAAAA--AT-CAACGAATGGATGTTAAATATTAACAAAATCATCATAA---------CTGAATAACACAT--TGGT-TAACCT-AGTGattcactcattcaaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3722074 98 + 4093027 GTGTTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAAATCATCATAA---------CTGAGTAACAGAT--AGGT-TAACCT-AGTGattcactcattcaaa i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 602709 80 + 2414909 ----GTGAT-------------------TGGGAGTTAAATATTAGTAAAATCATCATTA---------CTAAACAATAAATATAAGT-CAGCCTAAGTGattcactcatac-aa i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11066897 108 + 30473821 ATGTCTGATCAAACAA--AT-CAAGTAATGGGTTTTAAATATTAGTGAAATCATTATTATGATTTATTCTAAACAATAAATACAGGT-CAGGTT-AGTGattcattcacag-aa i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45769979 99 - 149736546 AAGTCTTACAGTAAAGGCAA-CTGCTGACAGATGTTAAAATGCCCAGAGACTGTCACTA---------CTAAAGAATAATT--AGGT-CAAACT-AGCAATTTCTTTATAT-AA i mm10.chr6 C 0 I 2488 s canFam3.chr20 16600756 98 + 58134056 GTGTTTTATATGAAAAATAT-CAAGTAATGGATGTTAGATATTAGAAAAATC--CATGA---------CTAAACAACAGAA--AAATATAGCCT-GATTattccttcattc-ag i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1836831 99 - 2187301 ATCTTTTACAGGAAAA--ATACCAATTATGAGTGCTATATATTAATAAAATTACAATTA---------CTAATCAACAAAC--AGGTCTAGCCT-GCTGatccatccagtc-aa i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e micMur3.chr32 1616946 699 - 9149476 I e rhiRox1.KN296641v1 1377254 1440 - 1467263 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231784 1150 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=6118869.000000 s hg38.chrUn_KI270749v1 109529 556 + 158759 aaaatatttactgtacattcatgatgtggaaagcagtattctaggcactagcaagacagcagggaaTTGGTTCTTATCAAACTTAT-ATTCTACTAGAAAT-----AGATGCATATGAAT--AGA-GTTTTCAG--AAGAGAAATTAAAGGTTGCAAGAA-----ATATAAAGAATATAAAGAGTCACATATTAATAGGCAATATAGGCTAtggtatgctgacaaatgtttaataaccagctctctaaaagg-----aa--------caaagca----agcc--gagtt------tttgccattttctgtgatgaaaacattcccaacatgactaatttaaatatac-taatatgacatcactcaatac----atagttggaaagag--g----tata--ccataagccctagtgagctgttataagacaacattggcacacacactATGACAAGATTactttaagttggatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaaaaaccag----aaaaagtcgtgtgtga-aatcttgaggcattacaccctgaagagggataacagct-----a-----aagttcccaaaccagtgcaagcctgga s panTro5.chr3 201996740 556 - 202621043 aaaatatttactgtacattcatgatgtggaaagcagtattctaggcactagcaagacagcagggaattggttcttatcaaacttat-attctactagaaat-----agaTGCATATGAAT--AGA-GTTTTCAG--AAGAGAAATTAAAGGTTGCAAGAA-----ATATAAAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaataaccagctctctaaaagg-----aa--------caaagca----agcc--gagtt------tttgccattttctgtgatgaaaacattcccaacatgactgatttaaatatac-taatatgacatcactcaatac----atagttggaaagag--g----tata--ccataagccctagtgagctgttataagacagcattggcacacacactATGACAAGATTactttaaattggatactc-agaaaaggcctctctgggaaactgacactt--aaactaagatctgaaaaaccag----aaaaagtcgtgtgtga-aatcttgaggcattacaccctgaagagggataacagct-----a-----aagttcccaaaccagtgcaagcctgga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204764778 556 - 205426864 aaaatatttactgtacattcatgatgtggaaagcagtattctaggcactagcaagacagcagggaattggttcttatcaaacttat-attctactagaaat-----agaTGCATATGAAT--AGA-GTTTTCAG--AAGAGAAATTAAAGGTTGCAAGAA-----ATATAAAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaataaccagctctctaaaagg-----aa--------caaagca----agcc--gagtt------tttgccattttctgtgatgaaaacattcccaacatgactgatttaaatatac-taatatgacatcactcaatac----atagttggaaagag--g----tata--ccataagccctagtgagctgttataagacagcattggcacacacactATGACAAGATTactttaaattggatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaaaaaccag----aaaaagtcgtgtgtga-aatcttgaggcattacaccctgaagagggataacagct-----a-----aagttcccaaaccagtgcaagcctgga i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67583704 566 + 86207423 aaaatatttactgtacattcatgatgtggaaagcagtattctaggcattgggaagacggcagggaattggttcttatcaaacttat-attctactagaaat-----agaTGCATATGTAT--AGA-GTTTTCAG--AAGAGAAATTAAAGGTAGCAAGAA-----ATATAAAGAATATAAAGAGTCACATATTAACAGGCAATATAGGcaacggtacgctgacaaatgtttaataaccagctttctaaaggg-----aa--------caaagca----atccctgagttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaaatatac-taatatgacatcactcaatac----atagttggaaagag--g----tgta--ccataagccctagtgagctgttttaagacagcatcggcacacacactATGACAAGATTactttaagttggatactc-agaaaaggcctctctgggaaagtgacacttagaaactaagatctgaaaaaacag----aaaaagtcatgtgtga-aatcttgaggcattacaccctgaagagggataacagct-----a-----aagttcccaaaccagtgcaagcctgga i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66064657 568 + 204787373 aaaatatttactgtacatttgtgatgtggaaagtagtattctaggcattgggaagacagtcgggaaTTGGTT-TTATAAAACCTAT-ATTCCGCCAGAAAT-----AGATGCATATGAAT--AGA-GTTTTCAG--AAGAGAAATTAAAGGTTGTAATAAGTAGTATAAAGAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaataaccagctgtctaaaagg-----aa--------caaagcc----agccctgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagag--g----tata--ccataagccctagtgagttgttgtaagacagcattggcacacacactATGACAAGATTactttaagttggatactc-agaaaaagcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctgga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60996506 568 - 192460366 aaaatatttactgtacatttgtgatgtggaaagtagtattctaggcattgggaagacagtcgggaattggtt-ttataaaacctat-attccgccagaaat-----agatgcatatgaat--aga-gttttcag--aagagaaattaaaggttataataagtagtataaagagaatataaagagtcacatattaataggcaatataggcaatggtatgctgacaaatgtttaataaccagctgtctaaaagg-----aa--------caaagcc----agccctgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagag--g----tata--ccataagccctagtgagttgttgtaagacagcattggcacacacactatgacaagattactttaagttggatactc-agaaaaagcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctgga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11108472 568 - 17224310 aaaatatttactgtacatttgtgatgtggaaagtagtattctaggcattgggaagacagtcgggaattggtt-ttataaaacctat-attccgccagaaat-----agatgcatatgaat--aga-gttttcag--aagagaaattaaaggttgtaataagtagtataaagagaatataaagagtcacatattaataggcaatataggcaatggtatgctgacaaatgtttaacaaccagctgtctaaaagg-----aa--------caaagcc----agccctgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagag--g----tata--ccataagccctagtgagttgttgtaagacagcattggcacacacactatgacaagattactttaagttggatactc-agaaaaagcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctgga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17420656 568 - 41321030 aaaatatttactgtacatttgtgatgtggaaagtagtattctaggcattgggaagacagtcgggaaTTGTTT-TTATAAAACCTAT-ATTCCGCCAGAAAT-----AGATGCATATGAAT--AGA-GTTTTCAG--AAGAGAAATTAAAGGTTGTAATAAGTAGTATAAAGAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaataaccagctgtctaaaagg-----aa--------caaagcc----agccgtgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagag--g----tata--ccataagccctagtgagttgttgtaagacagcattggcacacACAGTATGACAAGATTactttaagttggatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctgga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64492130 568 - 101219884 aaaatatttactgtacatttgtgatgtggaaagcagtattccaggcattgggaagacagtcgggaattggtt-ttataaaacctat-attctaccagaaat-----agatgcatatgaat--aga-g-tttcag--aagagaaattaaaggttgtaataagtagtataaagagaatataaagagtcacatattaagaggcaatataggcaatggtatgctgacaaatgtttaataaccaactgtctaaaagg-----aa--------caaagcc----agccctgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagag--g----tata--ccataagccctagtgagttgttgtaagacagcattggcacacacactatgacaagattactttaagttggatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaataaccag---aaaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctgga i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 878097 568 - 924385 aaaatatttactgtacatttgtgatgtggaaagtagtattctaggcattgggaagacagtcgggaaTTGGTT-TTATAAAACCTAT-ATTCCGCCAGAAAT-----AGATGCATATGAAT--AGA-GTTTTCAG--AAGAGAAATTAAAGGTTGTAATAAGTAGTATAAAGAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaaggtttaataaccagctgtctaaaagg-----aa--------caaagcc----agccctgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagac--g----tata--ccataagccctagtgagttgttgtaagacagcattggcacacacactATGACAAGATTactttaagttggatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctgga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6719093 567 - 10587913 aaaatatttactgtacatttgtgatgtggaaagcagtattctaggcattgggaaAATAATCTGGAATTGGTT-TTATAAAACCTGT-ATTCTACCAGAAAT-----AGATGCATATGAAT--AGA-GTTTTCAG--AAGAGAAATTAAAGGTTGTAATAAGTAGTATAAAGAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaataaccagctgtctaaaagg-----aa--------caaagcc----agccctgagttgctgtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaaatctac-taatatggcatcactcaatac----atagttggaaagag--g----tata--ccataagccctagtgagctgttataagacagcatcagcacacacactATGACAAGATTactttaagttggatactc-agaaaaggcctctctgggaaagtgacactt---aactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctgga i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46054238 572 - 98464013 aaaatatttattgtacatatgtgatgtggaaagaagtattctaggcactgggaagacagcagggaaTCAGTTCTTATAAAATTTATAATTCTACCAGAAAC-----AGACGCATATGAAT--AGA-GTTTTCAG--AAGAGAAATAAAAGATTGTAATAA-TAGTATGAAGAGAATAT--AGAGTCACATATTAATAGGCAATATAGGcagtggcatgctaacaaacgtttaattaccagctctcttaaaaggaacaaa--------caaagca----agccctgggttgcagtatttgccattttctgtgatgaaaacattcccaacatgactgatttcagtctac-tagcatgacatcactcaatac----atagatgcaatgag--g----tatg--ccatcagccctagtgagctgttacaagacagctctggcacacATGCTATGATAAGATTactttaagttgcatactc-agaaaaggcctctctgggaaactgacactt--aaactaagatctgaataaccag----aaaaagtcacatgtga-aatcttgaggcattacaccctgaacagagaaaacagat-----a-----aagtccccaaactaatacaagcttgga i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27725828 572 + 27742158 aaaatatttattgtaaatctgtgatgtggaaagaagtattctaagcactgcaaaggcagtagagaaTCAGTTCTTATAAAATTTATAATTCTACCAGAAAC-----AGATGCATATGAAT----A-GTTTTCAG--AAGAGAAATAAAAGGTTGTAATAA-TAGTATGAAGAGAATATAAAGAATCACATATTCATAGACAATATAGGcaatggtatgctgacaaatgtttaattaccagctctcttaaaaggaacaaa--------caaagca----agccctgggttgcagtatttgccattttctgtgatgaaaacattcccaacatgactgatttcagtccac-taatatgatatcactcaatat----atagatggaatgag--g----tata--ccatcagccatagtgagctgttacaagatggctccggcatacACGCTATGATAAGATTactttaagttgcatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaagtcacatgcaa-aatcttcaggcattacaccctgaacagagaaattggat-----a-----aagtccccaaaccagtacaagcctgga i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 263268 572 - 4835464 aaaatatttattgtaaatctgtgatgtggagagaagtattctaggcactgggaagacagtagggaaTCAGTTCTTATAAAATTTATAATTCTACGAGAAAC-----AGATGCATATGAAT----A-GTTTTCAG--AAGAGAAATAAAAGCTTGTAATAA-CAGTATGAAGAGAATATAAAGAACCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaattaccagctctcttaaaaggaacaaa--------caaagca----agccttgggttgcagtatttgccattttctgtgctgaaaatgttcccaacatgactgatttcagtctac-taatatgacatcactcaatac----ataggtggaatgag--g----tata--ccatcagccctagtgagctgttataagacagctccggcatacACGCTATGATAAGATTactttaagttgtatactc-agaaaaagcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaagtcacatgtga-aatattcaggcattacatcctgaacagagaaaacagat-----a-----aagtccctaaaccagtacaagcctgga i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3722172 569 + 4093027 aaaatatttattgtaaatctgtgatgtggaaagaagtattctagtcactggaaagacagtaggaaaTCAGTTCTTATAAAATGTATAATTCTACCAGAAAC-----AGATGTATATGAAT----A-GTTTTCAG--AAGAGAAATAAAAGGTTGTAATAA-TAGTATGAAGAGAATGTAAAGCATCACATATTAATAGGCAATAta-------gtatgctgacaaatgtttaattaccagctctcttaaaaggaacaaa--------caaagca----agccctgggttgcagtatttgccattttctgtgatgaaaacattcccaacatgactgatttcagtctac-taatatgacctcattccatctactaatagatggaatgag--g----tata--ccatcagccctagtgagctgttataagacagatccagcatacACGCTATGATAAGATTactttaagttgcatactc-agaaaaggcctctctgggaaagtgacgctt--aaactaagatctgaataaccag----aaaaagtcacatgtga-aatcttgaggcattataccctgaacagagaaaatagat-----a-----aagtccccaaaccagtagaagcctgga i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 602789 558 + 2414909 aaaatatttactgtatgcctgtgatatagaaagcagtattctaggcactgagaagagatcttcaaatagtttctcataacgtttat-attctaccagaaag-----agatgcatacaaatacagattttttaaa--gggaaaa-------------ataaata----------aataaaaagagttacgtattaattggcaatataggcaatggtatacaggtaaatgtttaataaccaactctctgaaaca-----aa--------caaagcaag--agtcctgggttgtagtgtttgtcatattctgcggtgtaaatattcccaacatgacagctttcaatctgc-ctatatgacatcactgaatac----atagctgcaaagag--gcatatata--ccactagccctagtgagctgtgctaagatggttctatcacacacactgtgattgggctgcttttagttgaagagtc-aggaaagacctctctaggaaa-tgacactt--aaactagaatctgaataactag----aaaaagtcacgtgtgc-ag-cgagaggcactacattatgaacagggaaaacagcc-----agtgcaaaatccctaagccagtacaagcctgaa i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11067005 575 + 30473821 aaaacatttactgtatacctgtgatatagaaagcagtattccaggcactgaaaagaggacagtgaacaaTTTCTCACAGCCTTTAT-CTTCTACCAGAAAT-----AGATGCATAT-AATGCAAA-TTTTTAAG--GAGACAAGTAAAAGGTGTTGATAAATAGCACAAAGGGAATAAAAAGTGTTACGTGTTAA-TGGCAATATATGcagtggcacgtgggtaagtgtttaataacccgttctctgaaaca-----ga--------caaagccagccagccctggattgcagttcttgccattgtccattgtgtaaacgctctgaacgtgactgccttcagtctac-cagtatgacatcattgaatac----gtagctgcagacag--g----tgca--ccagtagacccggtgagc-gttctaagatgtcaccatcacacACCCTATGGCCAGgctactttacattgaagagtc-aggcaagaccgctctgggaag-tgacactt--agactagtgtctgaataactag----agaaaattacatgggg-ag-ctagagaagctatattctgagcagggaaaacagct-----agtgtgaaatcccaaagccagtataagactgaa i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16600854 560 + 58134056 caaatatttgctgtacacctgtcatgtggaaagtgcttttctagacactgagaagaaagcagtgaatcagttctcataacgctcat-attctacaagaaattgacaagacacatataaatacaga-ttttttaa--aagacaaat----gattttaataaatagtacaaagaata---aaagagttatacattgttaggtgatgtaggcaatggtatgttggtaaatgttcaaaaatcaattctcaaaaaaa-----aa--------------a----aatctctggttatagtgtttgccattctctgttgtgtaaataatcccagcatggctgatttcaagccatggaacatgacattgctgaatag----agaattgggaagagatg----tata--ccatgaactctagtgagctgttctaagagggctccagcatac----catgataaggctaagttaagttgaat----------aggtctccctgggaaaatgacattt--aaactaaggcctgaataaccag---aaaaaaatcatgggtgaggaactatataagccatattctgagcagagaaaacagctcgtaaa-----aagtcccaaaggcaatacaagcttgga i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1836930 570 - 2187301 caaatatttaccatatttctgtgatgtgcagagtaccacactaggcactgggaaaa--gcagtgaattggctcctgaaaaactaat-cgtctactggaaat-----agacatataCAAATGCAGG-TTTTCTAAACAAAGGAAATAAAAGTTTGTGATAAATAGTACAGAGAGAATAAAAAGAGTTTCATATTAGGAGGTGGTATAGG-----------------ACGTTTTACAACTAGCTTTCAACAAaa-----taaaacaacccaaataa----agccctgagctacagcatttgccattttccatagtgtaaatatttccaccatgactgatttcatgctac-caatacagcatcactgaatat----gaacttgggaagag--a----catactccatcagctttagcaagctggttcaagccagctccagcacac---cactgATAAAGCTCCATTATGATGTACAgttaaggacagatctttcagggaaagtgttattt--aagctaatatctgaaggggcaggaaaaaaaaaacatgtgcag-ag-ctagaggatctgtattctgggcagagaaaattact-----aatgcaaagtcccaaagccaggacaagcttaga i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e mm10.chr6 45770078 2488 - 149736546 I e micMur3.chr32 1616946 699 - 9149476 I e rhiRox1.KN296641v1 1377254 1440 - 1467263 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I e rhiBie1.NW_016820128v1 1231784 1150 - 2311269 I e tarSyr2.KE939134v1 175632 1693 + 958716 I a score=18459.000000 s hg38.chrUn_KI270749v1 110085 1 + 158759 t s panTro5.chr3 201997296 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765334 1 - 205426864 t i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67584270 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66065225 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997074 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109040 1 - 17224310 t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421224 1 - 41321030 t i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64492698 1 - 101219884 t i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 878665 1 - 924385 t i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6719660 1 - 10587913 t i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1378694 1 - 1467263 t i rhiRox1.KN296641v1 I 1440 I 1065 s rhiBie1.NW_016820128v1 1232934 1 - 2311269 t i rhiBie1.NW_016820128v1 I 1150 I 1064 s calJac3.chr15 46054810 1 - 98464013 t i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726400 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 263840 1 - 4835464 t i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3722741 1 + 4093027 t i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 177325 1 + 958716 t i tarSyr2.KE939134v1 I 1693 I 1087 s proCoq1.NW_012148064v1 603347 1 + 2414909 t i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11067580 1 + 30473821 t i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16601414 1 + 58134056 c i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1837500 1 - 2187301 t i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 23852 4273 + 635616 I e eulMac1.LGHX01000499v1 23716 4271 + 631505 I e mm10.chr6 45770078 2488 - 149736546 I e micMur3.chr32 1616946 699 - 9149476 I e papAnu3.chr2 59555245 1447 + 187378091 I e nasLar1.chr2 57726726 1442 + 181502896 I e ponAbe2.chr3 69651981 2471 + 202140232 I a score=25116.000000 s hg38.chrUn_KI270749v1 110086 1 + 158759 t s panTro5.chr3 201997297 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765335 1 - 205426864 t i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69654452 1 + 202140232 t i ponAbe2.chr3 I 2471 I 1064 s nomLeu3.chr21 67584271 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66065226 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997075 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109041 1 - 17224310 t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421225 1 - 41321030 t i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59556692 1 + 187378091 t i papAnu3.chr2 I 1447 I 1068 s chlSab2.chr22 64492699 1 - 101219884 t i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 878666 1 - 924385 t i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57728168 1 + 181502896 t i nasLar1.chr2 I 1442 I 1066 s colAng1.NW_012114711v1 6719661 1 - 10587913 t i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46054811 1 - 98464013 t i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726401 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 263841 1 - 4835464 t i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3722742 1 + 4093027 t i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 603348 1 + 2414909 t i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 27987 1 + 631505 t i eulMac1.LGHX01000499v1 I 4271 I 912 s eulFla1.LGHW01000501v1 28125 1 + 635616 t i eulFla1.LGHW01000501v1 I 4273 I 912 s otoGar3.GL873534 11067581 1 + 30473821 t i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16601415 1 + 58134056 t i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1837501 1 - 2187301 t i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45770078 2488 - 149736546 I e micMur3.chr32 1616946 699 - 9149476 I e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I a score=624141.000000 s hg38.chrUn_KI270749v1 110087 62 + 158759 gttggaagaac---aagaaggccaataagtctggggtgtactacataaaaggaggatatacaatg s panTro5.chr3 201997298 65 - 202621043 gtcggaggaacaagaagaaggccaataagtctggggtgtactacataaaaggagggtatacaatg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765336 65 - 205426864 gtcggaggaacaagaagaaggccaataagtctggggtgtactacataaaaggagggtatacaatg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67584272 65 + 86207423 gttgaaggaaaaagaagaaggccaataagtctggggtgtactacataaaaggaggatatacaatg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66065227 65 + 204787373 gttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaatg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997076 65 - 192460366 gttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaatg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109042 65 - 17224310 gttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaatg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421226 65 - 41321030 gttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaatg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64492700 65 - 101219884 gttggaggaataggaagaaagccaataagtctggggtgtactacgtaaaaggaggatatacaatg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 878667 65 - 924385 gttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaatg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6719662 65 - 10587913 gttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaatg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46054812 62 - 98464013 gttggagaaacagcaag---gccagtaagtctggactatactacacaataagaggatataaaatg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726402 62 + 27742158 gttagaggaacagcaag---gccagtaagtctggactatactacacaataagaggatataaaacg i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 263842 62 - 4835464 gttggaggaacagcaag---gccaataagtctggactatactacacaataagaggatataaaatg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3722743 62 + 4093027 gttggaggaacagcaag---gccaataagtctggactatactacacaataagaggatataaaatg i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 603349 65 + 2414909 gttcaaggaacaaaaataaggcctgtgagcctggaatacaacaagcaaaggtgggatttaaagta i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11067582 65 + 30473821 gttcaagaaagaaaaagtgggtctgtgagcctagaatacaacaaacaaaggtaggatataaaagt i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16601416 64 + 58134056 -atggaggaacaaaaagacggccagtgaatctgaagtgtaacaagcaaacggaggatgaatcatg i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1837502 51 - 2187301 gttggaggaatcaaaagaaaatctgtgagtctggagtat---aaacaagcaaag----------- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 28126 912 + 635616 I e eulMac1.LGHX01000499v1 27988 912 + 631505 I e mm10.chr6 45770078 2488 - 149736546 I e micMur3.chr32 1616946 699 - 9149476 I e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e papAnu3.chr2 59556693 1068 + 187378091 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I a score=19385.000000 s hg38.chrUn_KI270749v1 110149 3 + 158759 aga s panTro5.chr3 201997363 3 - 202621043 aga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765401 3 - 205426864 aga i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67584337 3 + 86207423 gga i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66065292 3 + 204787373 gga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997141 3 - 192460366 gga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109107 3 - 17224310 gga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421291 3 - 41321030 gga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64492765 3 - 101219884 gga i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 878732 3 - 924385 gga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6719727 3 - 10587913 gga i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46054874 3 - 98464013 gga i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726464 3 + 27742158 gga i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 263904 3 - 4835464 gga i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3722805 3 + 4093027 gga i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 603414 3 + 2414909 gag i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11067647 3 + 30473821 gag i otoGar3.GL873534 C 0 I 16 s mm10.chr6 45772566 2 - 149736546 GG- i mm10.chr6 I 2488 C 0 s canFam3.chr20 16601481 2 + 58134056 gg- i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1837553 3 - 2187301 aga i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 28126 912 + 635616 I e eulMac1.LGHX01000499v1 27988 912 + 631505 I e micMur3.chr32 1616946 699 - 9149476 I e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e papAnu3.chr2 59556693 1068 + 187378091 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I a score=1542999.000000 s hg38.chrUn_KI270749v1 110152 115 + 158759 ttagaaaaacagtcaaagcttttcatgcagaacttcataatatagagtatgaaatttggcaaa----------gatgtcactggaaggtttGTGAATCATTTTAATTGTATTGATTAAAACTT-TT--- s panTro5.chr3 201997366 115 - 202621043 ttagaaaaacagtcaaagcttttcatgcagaacttcgtaatatagggtatgaaatttggcaaa----------gatgtcactggaaggtttGTGAATCATGTTAATTGTATTGATTAAAACTT-TT--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765404 115 - 205426864 ttagaaaaacagtcaaagcttttcatgcagaacttcgtaatatagggtatgaaatttggcaaa----------gatgtcactggaaggtttGTGAATCATGTTAATTGTATTGATTAAAACTT-TT--- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67584340 116 + 86207423 ttagaaaaatagtcaaagcttttcatgcagaacttcgtaatatagggtatgaaatttggcaag----------gatgtcactggaaggtttGTGAATCATGTTAATTGTATTAATTAAAACTTACT--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66065295 116 + 204787373 ttagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTCACTGGAAGTTTTGTGAATCATGTTAATTGTATTTATTAAAACTCATT--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997144 116 - 192460366 ttagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTCACTGGAAGTTTTGTGAATCATGTTAATTGTATTTATTAAAACTCATT--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109110 116 - 17224310 ttagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcACG----------GATGTCACTGGAAGTTTTGTGAATCATGTTAATTGTATTTATTAAAACTCATT--- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421294 116 - 41321030 ttagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTCACTGGAAGTTTTGTGAATCATGTTAATTGTATTAATTAAAACTCATT--- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64492768 116 - 101219884 ttagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTCACTGGAAGTTTTGTGAATCGTGTTAATTGTATTTATTAAAACTCATT--- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 878735 116 - 924385 ttagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTCACTGGAAGTTTTGTGAATCATGTTCATTGTATTTATTAAAACTCATT--- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6719730 116 - 10587913 ttagaaaaacagtcaaagattttcatgcagaacttcgtaatatagggtatgaaatttggcAAG----------GATGTCACTGCAAGTTTTGTGAATCATGTTAATTGTATTTATTAAAACTCATT--- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46054877 115 - 98464013 ttataaaaacagtcaaagtttttcatgcagaactttgtaatacagggtataaaatctggcAAG----------GATTTTATTAGAAGTTTTGTAAATCATGTTAATTGTATT-ATTACATCTCATT--- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726467 115 + 27742158 ttataaaaacagtcaaagtttttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTTATTAGAAGTTTTGTGAATCATGTTAATTATATT-ATTACAACTCATT--- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 263907 115 - 4835464 ctataaaaacagtcaaagtttttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTTATTAGAAGTTTTGTGAATCATGTTAATTGTATT-ATTACAACTCATT--- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3722808 115 + 4093027 ttataaaaacagtcaaagtttttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTTATTAGAAGTTTTGTGAATCATGTTAATTGTATT-ATTACAACTCATT--- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1617645 116 - 9149476 ttagaaaagcagccaaagcctttcatgcagaactttctaATAGAGGGTATAGAAATTGGCAGA----------GATGTCAGTGGAAGGTTTATGAATCATGTTAATTGTCTTGGTTAAAACTCATG--- i micMur3.chr32 I 699 C 0 s proCoq1.NW_012148064v1 603417 116 + 2414909 ttagaaaaacagccaaagtctttcatgcagaactttgtaATAGAGAGTATAGCAATTGGCAGA----------GATGTCATTGGAAGGCTTATGAATCATGTTAATTGTCTTGGTTAAAACTCATG--- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11067666 115 + 30473821 atagaaaagcagccgaaggctttcatgcagAACTTTGTAACATAGGGC-TAGAAGTGGGCAGA----------GATGGCATTGGAAGGTTTGTGAATCGTGTTAATTGTCTTAGTTAGAACTAAAG--- i otoGar3.GL873534 I 16 C 0 s mm10.chr6 45772568 116 - 149736546 CCAGAGAGGAAGCCAACGACTTTCATGCAGAACATTGTGATATAGGATGTGAAATTTGCCTGA----------GATATTCCTGCAAAGATTATGAATCATATTAATTCCCTTGATTAACATTTATT--- i mm10.chr6 C 0 C 0 s canFam3.chr20 16601483 110 + 58134056 ttggaaaggcagccagag-ccttcacagggaaccttgtaatatagGGTATATAATATGGCTGG----------GATGCTACTAGATGATCTATTAATCAT----ATTGTAGTGATTAAAACTCTT---- i canFam3.chr20 C 0 I 205 s dasNov3.JH563077 1837556 115 - 2187301 -----gaAACA---------TTTCATGTAGAACTATGTAATACATGGTATAGAATTTGACTGGGATATAATTAGATATTATTAGAAAGTTTATTAATCATATCAATTTTCTTGATTATATATTATTATT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 28126 912 + 635616 I e eulMac1.LGHX01000499v1 27988 912 + 631505 I e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e papAnu3.chr2 59556693 1068 + 187378091 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I a score=2235886.000000 s hg38.chrUn_KI270749v1 110267 169 + 158759 GCATTTACTCTATGCTGTCTATAGTAAAGC--AAAAAGCTATTAC-AG---AAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATAGGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATCTCAACATATTATTAC-AATTATGGCATCCAA s panTro5.chr3 201997481 170 - 202621043 GCATTTACTCTATGCTGTCTATAGTAAAAC--AAAAAGCTATTACAAG---AAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATAGGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATCTCAACATATTATTAC-AATTATGGCATCCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765519 169 - 205426864 GCATTTACTCTATGCTGTCTATAGTAAAAC--AAAAAGCTATTAC-AG---AAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATAGGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATCTCAACATATTATTAC-AATTATGGCATCCAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67584456 167 + 86207423 GCATTTACTC-ATGCTGTCCATAGTAAAGC--AAAAAGCTATTAC-AG---AAGGAGGAAAAGA-CTTGGCTTACTGATGATAAAAAGAATAGGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATCCCAACATACTATTAC-AATTATGGCATCCAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66065411 169 + 204787373 GTATTTACTCTATGCTTTCCATAGTAAAGC--AAAAAGCTATTAC-AG---GAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997260 169 - 192460366 GTATTTACTCTATGCTTTCCATAGTAAAGC--AAAAAGCTATTAC-AG---GAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109226 169 - 17224310 GTATTTACTCTATACTTTCCATAGTAAAGC--AAAAAGCTATTAC-AG---GAGGAGGAACAGACCTTGGCTTACTGATGATAAGAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421410 169 - 41321030 ATATTTACTCTATGCTTTCCATAGTAAAGC--AAAAAGCTATTAC-AG---AAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64492884 169 - 101219884 GTATTTACTCTATGCTTTCCATAGTAAAGC--AAAAAGCTATTAC-AG---AAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 878851 169 - 924385 GTATTTACTCTATGCTTTTCATAGTAAAGC--AAAAAGCTATTAC-AG---AAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6719846 169 - 10587913 GTATTTACTCTATGCTTTCCATAGTAAAGC--AAAAAGCTATTAG-AG---AAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTGTTAC-AATTATGGCATCCAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46054992 169 - 98464013 GCATTTACTCTATGCTGTCCACAGTAAAGC--AGAAAGCTGCTAC-AA---AAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAACATTTTTTAAAAAGCAAGTCGAATAATAGATTAGAATTAGTAGGCATGTCAACCTATTATTAG-CATTATGGCATCCAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726582 169 + 27742158 GCATTTACTCTCTGCTGTCCACATTAAAGC--AGAAAGCTATTAC-AA---AAGGAGGAACAGACCTTAGCTTACTGATGATAAAAAGCATATGAAAAAGTTTTTTAAATCTATGTTGAATAAGAGGTTAGAATTAGTAGGCATGTCAACCTATTATTAC-TATTATGGCATCCAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264022 169 - 4835464 GCATTTACTCTATGCTGTCTACAGTAAAGC--AGAAAGCTGTTAC-AA---AAGGAGAAACAGGCCTTGGCTTACTGATGATAAAAAGAATATGAACAAAATTTTAAAATCTAGGTTGAATAAGAGATTAGAATTAGTAGGCATGTTAACCTATTATTAC-TATTATGGCATCCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3722923 169 + 4093027 GCATTTACTCTGTGCTGTCCACAGTAAAGC--AGAAAGCTGTTAC-AA---AAGGAGGAACAGATTTTGGCTTACTGATCATAAAAAGAATATGAAAAAATTTttaaaatctagattgaataagaagttagaattagTAGGCATATCAACCTATTATTAC-TGTTATGGCATCTAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1617761 169 - 9149476 GCATTTACTCTGAGCTGTCCATAGTAAAGT--CAAAAGTTATTAC-A----GAGGCAGGACAGACCTTGGCCTACTGATGATAAGAAGAATATAAGAAAATGGTTTGGAATTAGGTTGAATAAAAGTGTAGAATTAGTAAACCTGTGAGCATATCATGGCTAATTATGGCATCTAA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 603533 169 + 2414909 GCATTTACTCTGAGCTGTCCATAGTAAAGT--AAAAAGTTATTAC-G----GAGGCAGGACAGACCTTGGCTCACTGATGATAAGAAGAATATAAGAAAATGCTTGGGAATTAGGTTGAATAAAAGTGTAGAATTAGTAAGCATGTGAGCATATCATTGCTAATTGTGGCATTCAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11067781 172 + 30473821 CCATTTAATCTGTGCTATCCATAATGAAGG--AAAATGTTATTAC-TTCACAAGGCAGGACAAGCCTTGGCTAAATGATTAT-AGGAGAACATAAGAAAATGCTTGGAAAGTAGGTTGAAAAAAATTTAAGATTTAGCAAGAGTGTGACCATTGTATTCCTAATTATGGAATCCAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45772684 169 - 149736546 GCATTTAGTCCACGCTGTCCCCTGTGCAGT--AACATGTTATTAC-TG---AAGGAA-CACAGCCATAAGCTCACAGAGCATAAGAATAATAGGAGAAAACTCCCGGGAACTGGATTGAATAAAAGCTCAGAGTTGAAGAGCATGTCAACATACTATTACTAATTATAGCATCCAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16601798 169 + 58134056 GTATTTACTCTGTGCTGTTCATAGTAAGGTAAAAAAAGTTATTGC-AG---AATGAAGGACAGGCCTTGGCTCTTTG-TGATAGGACAAACATTAGAAAATATTTGGGAACTAGGTTAAATAAAACTTTGGAATTAGTAAG--TGTCAACATAATATTACTAATTGTGGCATTCAA i canFam3.chr20 I 205 C 0 s dasNov3.JH563077 1837671 165 - 2187301 ACATTGACTTTGTGCTGTTCACAGTAAAGA--AA----TTATTAC-AG---AAGGAGAGAGAGACCTTGACTGGCTAATGATAGGGGGAACATAAGGAAGTGCTTACAAACCAAGGCAAATAAAAGTTTAGAATTGATAAGTATGTCAAAATATTACtat-agccatgatatacaa i dasNov3.JH563077 C 0 I 8902 e eulFla1.LGHW01000501v1 28126 912 + 635616 I e eulMac1.LGHX01000499v1 27988 912 + 631505 I e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e papAnu3.chr2 59556693 1068 + 187378091 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I a score=19000.000000 s hg38.chrUn_KI270749v1 110436 1 + 158759 C s panTro5.chr3 201997651 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765688 1 - 205426864 C i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67584623 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66065580 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997429 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109395 1 - 17224310 C i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421579 1 - 41321030 C i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493053 1 - 101219884 C i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879020 1 - 924385 C i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720015 1 - 10587913 C i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055161 1 - 98464013 C i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726751 1 + 27742158 C i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264191 1 - 4835464 C i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723092 1 + 4093027 C i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1617930 1 - 9149476 C i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 603702 1 + 2414909 C i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11067953 1 + 30473821 C i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45772853 1 - 149736546 C i mm10.chr6 C 0 C 0 s canFam3.chr20 16601967 1 + 58134056 C i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 28126 912 + 635616 I e eulMac1.LGHX01000499v1 27988 912 + 631505 I e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e papAnu3.chr2 59556693 1068 + 187378091 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I e dasNov3.JH563077 1837836 8902 - 2187301 I a score=6011411.000000 s hg38.chrUn_KI270749v1 110437 380 + 158759 TTAATACATAATTTGCTTTGCTTCATAC-AAATATA--TTTTTCTG-CTTTTGTTTTCTATGGTCAATTACCACTGTCTGTCATGTTGT-ACTATTATCACTTTTAAAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCATGACCCAA----GAGCTTATATATAAAACAAATGTTTTTAAAACTGTGCCTATAATAGCACACAACAGC-AAGTATTAGATTCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGAGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACGGATGGTATTAGTGTTTATTAGAT s panTro5.chr3 201997652 380 - 202621043 TTAATACATAATTTGCTTTGCTTCATAC-AAATATA--TTTTTCTG-CTTTTGTTTTCTATGGTCAATTACCACTGTATGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCATGACCCAA----GAGCTTATATATAAAACAAATGTTTTTAAAATTGTGCCTATAATAGCACACAACAGC-AAGTATTAGATTCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGAGAACTGTATATATTTCTAACTCTATTC-AAAGATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765689 380 - 205426864 TTAATACATAATTTGCTTTGCTTCATAC-AAATATA--TTTTTCTG-CTTTTGTTTTCTATGGTCAATTACCACTGTATGTCATGTTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCATGACCCAA----GAGCTTATATATAAAACAAATGTTTTTAAAATTGTGCCTATAATAGCACACAACAGC-AAGTATTAGATTCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGAGAACTGTATATATTTCTAACTCTATTC-AAAGATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67584624 379 + 86207423 TTAATACATAACTTGCTTTGCTTCATAC-AAATATA--TTTTTCTG-CTTTTGTTTTCTATAGTCAATTACCACTGTCGGTCATGTTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCATGACCTAA----GAGCTTATATATAAAACAAATGTTTTTAAAATTGTGCCTATAACAGCACACAACAGG-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTG-TTATTAGAT i nomLeu3.chr21 C 0 I 105 s rheMac8.chr2 66065581 381 + 204787373 TTAATACATAATTTACTTTGCTTCATACAAAATATA--TTTTTCTG-CTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTTCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAACGTTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997430 381 - 192460366 TTAATACATAATTTACTTTGCTTCATACAAAATATA--TTTTTCTG-CTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTTCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAACGTTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109396 381 - 17224310 TTAATACATAATTTGCTTTGCTTCATACAAAATATA--TTTTTCTG-CTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTTCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAACGTTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGTCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421580 378 - 41321030 TTAATACATAATTTGCTTTGCTTCATACAAAATATA--TTTTTCTG-CTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTTCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAATATTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGCCACAAAC---ATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493054 381 - 101219884 TTAATACATAATTTGCTTTGCTTCATACAAAATATA--TTTTTCTG-CTTTTGTTTTCTATAGCCAGTTACCGCAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAACGTTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879021 381 - 924385 TTAATACATAATTTGCTTTGCTTCATACAAAATATA--TTTTTCTG-CTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTTCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAACATTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGGATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720016 381 - 10587913 TTAATACATAATTTGCTTTGCTTCATACAAAATATG--TTTTTCTG-CTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCATGACCTAA----GAGCTTGTATATAAAACAAACGTTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAAGTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTGTTAGTGTTTATTAGAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055162 383 - 98464013 TTAATATATAATTTGCTTTGCTTCATACAAAATATATTTTTTTCTG-CTTTTGTTTTCTATAGCCAATTACCACTGTCTGTCATGTTCC-ATTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCCTGACCTAA----GAGCTTATATATAAAACAAATGTTATT-AAATTGAACCTATAATAGCACACAACAGC-AAGTATTAGATGCCACTAACATAATATTTGGGAAATAAAATGTTATTGACTCCAAGGGAACTGTATATATTTCTAACTCTATAC-AAAAATGTCCTGTAACTCTAGAATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTATAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726752 383 + 27742158 TTAATACATAATTTGCTTTGCTTCATACAAAATATAATTTTTTCTG-CTTTTGTTTTCTATAGCCAATTAACACTGTCTGTCATGTTCC-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATATAAAATGACTTCCTGAGATCCTGACCTAA----GAGCTTATATATAAAACAAATGTTATT-AAATTGCGCCTATAATAGCACACAACAGC-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAGAATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGGGTTTATTATAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264192 375 - 4835464 TTAATACATAATTTGCTTTGCTTC--ACAAAATATCATTTTTTCTG-CTTTTGTTTTCTATAGCCAATTACCACTGTCTGTCATGTTCC-ACTATTATCACTTTTAGAAAGTGATTCTATCATA------CAATATAATATAAAATGACTTCCTGAGATCCTGACCTAA----GAGCTTATATATAAAACAAATGTTATT-AAATTGTGCCTATAATAGCACACAACAGC-AAGTAGTAGATGCCACAAGCTTAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATAAATTTCTGACTGTATTC-AAAAATGTCCTGCAACTCTAGAATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTATAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723093 380 + 4093027 --AATATATAATTTGCTTTGCTTCATACAAAATACAA-CTTTTCTG-CTTTTGTTTTCTATAGCCAATTACCACTGTCTGTCATGTTCC-ACTATTATCACTTTTAGAAAGTGATTCTATCATATAAAACCAACATAATATAAAATGACTTCCTGAGATCCTGACCTAA----GAGCTTATATATAAAACAAATGTTATT-AAATTGCACCTATAATAGCACACAACAGC-AAGTTTTAGATGCCACAAACATAATATTTGGGAAACAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAGAATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTATAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1617931 378 - 9149476 TTAATACATAATTTGCTTTG-----TACAAAATTTAC-TTTTTCTG-CTTTTATTTTCTGTAGCCAATTACCACTGCCTGTCATGTTGTCACTATTTTCATTTTTAGAAAGTGAGTCTATCATATAAAAACAATATAATCTAAAATGACTTCCTGATATTTTGACCTAA----GAGCTTATATATAAAATAAATGATTTTTAAATTGTGGCTATAATGGCACATAACTGC-AAGTATTAGATACCACAGACATAATATCTGGCAAATAAAATGTTATGGACTCCAAGGGAACTGCATATATTTCTTACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 603703 378 + 2414909 CTAATACATAATTTGCTTTG-----TACAAAATTTAC-TTTTTCTG-CTTTTATTTTCTATAGCCAATTACCACTGCCTGTCACGTCATCACTATTTTCATTTTTAGAAAGTCAGTCTATCATATAAAAACAACATAATCTAAAATGACTTCCTGATATTTTGACCTAA----GGGCTTATATATAAAATAAATGTTTTTAAAATTGTGGCTATAATAGTACATAACAGC-AAGTATTAGATACCACAGACATAATATCTGGCAAATAAAATGTTATGGACTCCCAGGGAACTGTATATACTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11067954 372 + 30473821 TTAATACATGATTTGCTTTG-----TACAA-----TT-TTTGTTTG-TTTTTATTTTCTATAGCCAATTGCCG-TGTCAGTCCCATTGTCACTATTTTCATTTTCAGAAAGTGATTCGATCATATAAAACCTACATAATCTAAAATGACTTCCTGATATCGTGACCTAA----GAGCttatatataaaataaatgtttttaaaattGTGGTTGTAATAGCACATAACAGC-AAGTATTAGATACCACAGACATAATATCAGGAAAATAAAATGTTATGGACTCCAAGGGAACTGTATAAATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTGGTGTTTATTAGAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45772854 372 - 149736546 --AAACAATAATTTGCTTAA-TTCACATAACAC-----TTTTCCTC-CTTTTGTTCTCTATGGCCAATTACCA----CTGTCAGGTTGTCACTACAGTACTCTTTAGGAAATGATTGTATCATATAAAATCAACATAATCTAAAATGACTTCTGGAGATCTTGACCTAA----GCACTTATATATAAAACAAATGGTTTTTAAATTGTGGTTATAATAGCACATAAAAGC-AAGGAGTAGTTGCAACACACATAATATCTGGCAAATAAAATGTTATGGACTCCAAGGGAACTGTAGATATTTCTAACTCCATTC-AAAAATGTCCTGGAACTCTAG-ATAGAATTTCCCTGGGCTACAGAAAAGCACAGATGGTATTAATGTTTATTAGCT i mm10.chr6 C 0 C 0 s canFam3.chr20 16601968 373 + 58134056 TTAATACATAATTTGCTT-----CATGCAAATT-----TTTTTCTG-CTTTTGTTTTCTATAGCGAAATACTATTGTCATTCATGTTGTCACTACTGTCATTTCTAGAAAATGATTCTATCATATAAAA-TAGCATAATATAAAATGACTTCCTAAGATCCTGACCTAA----GAGCTTATATATAAAACAAATGTTTTTTAAATTGTGCCTATAATGGCACATAACAGC-AGGCATTAGATGCCATGGACGTAATATCTGGCAAATAAAATGTTATGGACTCCAAGGGAACTGTAGATATTTCTAACTCTATTC-AAAAATGTACTGTAACTGTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1846738 378 - 2187301 TTCATACATAATTTGCTTT-CTTTAT------------CTTTCCTATCTTTTGTTTTCTTTAGCCAAGTAAGACTGGCTTTCATCTTATCACTATTGTCATTTCTGAAGAGTGATTCTATCATATAAAAGCAGCATAATCTAAAATGACTTCCCAAGATCTTGACCTAATATTAAGCTTATATATAAAACAAATGTTTTTTAAATTGTGGCTATAACATCACATAACAGTAAAGCATTAGATACCATGGACATAATATCTGGCAAATAAAATGTTATAGATTCCAAGGGAACTGTAGATATTTCTAACTCTATTCAAAAAATGTCCTGCAACTCTAG-ATAGAATTTCCCTGGGCTACAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i dasNov3.JH563077 I 8902 C 0 e eulFla1.LGHW01000501v1 28126 912 + 635616 I e eulMac1.LGHX01000499v1 27988 912 + 631505 I e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e papAnu3.chr2 59556693 1068 + 187378091 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I a score=1083504.000000 s hg38.chrUn_KI270749v1 110817 81 + 158759 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAACACTGAAGTTCTGC--TAATATGGCAAGAATATGGAGATCAG-AAACAACA s panTro5.chr3 201998032 81 - 202621043 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAACACTGATGTTCTGC--TAATATGGCAAGAATATGGAGATCAG-AAGCAACA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766069 81 - 205426864 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAACACTGATGTTCTGC--TAATATGGCAAGAATATGGAGATCAG-AAACAACA i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66065962 81 + 204787373 CCATGAAGCTTGCTTT--AAAATATATATTTG--AAACACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACCAG-AAACAACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997811 81 - 192460366 CCATGAAGCTTGCTTT--AAAATATATATTTG--AAACACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACCAG-AAACAACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109777 81 - 17224310 CCATGAAGCTTGCTTT--AAAATATATATTTG--AAACACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACCAG-AAACAACA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421958 81 - 41321030 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAACACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACCAG-AAACAACA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493435 81 - 101219884 CCATGAAGCTTGCTTT--AAAAAATACATTTG--AAACACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACCAG-AAACAACA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879402 81 - 924385 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAACACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACTAG-AAACAACA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720397 81 - 10587913 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAACACTGATGTTCTGC--TAATATGGCCAGAATATGGAGATCAG-AAACAACA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055545 82 - 98464013 CCATGAAGCTTGCTTT-AAAAAAATACATTTG--AAACACTTATGTTCTGC--TAGTATGGCTAAAATATGGAGATCAG-AAACAACA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727135 82 + 27742158 CCATGAAGCTTGCTTT-AAAAAAATACATTTG--AAACACTTATATTCTGC--TAGTATGGCTAAAATATGGAGATCAG-AAACAACA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264567 83 - 4835464 CCATGAAGCTTGCTTTAAAAAAAATACATTTG--AAACACTTATGTTCTGC--TACTATGGCTAAAATATGGAGATCAG-AAACAACA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723473 82 + 4093027 CCATGAAGCTTGCTTT-AAAAAAATACATTTG--AAACACTTATATTCTGC--TAGTATGGCTAAAATATGGAGATCAG-AAACAACA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1618309 84 - 9149476 CCATAAAGCTTGCTTT--TAAAAACATATCTGAAAAACACTGAAGTTCTGC--TAATATGGCGAGAATAGAGAGGTCAGAAAAAAACA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 604081 83 + 2414909 CCATAAAGCTTGCTTT--TAGAAACATATCTGAAAAACACTGACGTTCTGC--TAATATGGCCAGAATACAGAGGTCAG-AAACAACA i proCoq1.NW_012148064v1 C 0 T 2918 s otoGar3.GL873534 11068326 81 + 30473821 CCATAACGGTGGCTTT--TAAAAATATATCTGAAAAACACTGAAGTTTTGC--TAATATGGCCAGAAT--AGAGGTCAG-AACCAATA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45773226 85 - 149736546 CCATGAAGGTTACTTT--TAAAAATATATCTGAAAAGCACTAAAGTTCTGCCTCAGAATGGTCAAAATACAGAGGTTGG-AACCCACA i mm10.chr6 C 0 C 0 s canFam3.chr20 16602341 83 + 58134056 CCATGAAAGTTGCTTT--TAAAAATATATCTGAAAAACACTGAAGTTCTGC--TAATATGGCCAGAATAAGGAGGTCAG-AAACAACA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1847116 83 - 2187301 CCATGAAGGTTGCATT--TAAAAATGTATTTGAAAAACAGTAAAGTTCTGC--TAATATGGCCAAAATTTGGAGGTCAG-AAACAGCA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 28126 912 + 635616 I e eulMac1.LGHX01000499v1 27988 912 + 631505 I e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e papAnu3.chr2 59556693 1068 + 187378091 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I e nomLeu3.chr21 67585003 105 + 86207423 I a score=244640.000000 s hg38.chrUn_KI270749v1 110898 22 + 158759 ATG----CAAAGTAGA----CATTCCTTGT s panTro5.chr3 201998113 22 - 202621043 ATG----CAAAGCAGA----CATTCCTTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766150 22 - 205426864 ATG----CAAAGCAGA----CATTCCTTGT i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66066043 22 + 204787373 ATG----CAAAGTAGA----CATTCTTTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997892 22 - 192460366 ATG----CAAAGTAGA----CATTCTTTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109858 22 - 17224310 ATG----CAAAGTAGA----CATTCTTTGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422039 22 - 41321030 ATG----CAAAGTAGA----CATTCCTTGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493516 22 - 101219884 ATG----CAAAGTAGA----CATTCCTTGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879483 22 - 924385 ATG----CAAAGTAGA----CATTCCTTGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720478 22 - 10587913 ATG----CAAAGTAGA----CATTCCTTGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055627 21 - 98464013 ATG----CTAAGTAGA-----ATTCCTTGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727217 22 + 27742158 ATG----CTAAGTAGA----CATTCCTTGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264650 22 - 4835464 ATG----CTAAGTAGA----CATTCCTTGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723555 22 + 4093027 GTG----CTAAGTAGA----CATTCCTTGT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1618393 26 - 9149476 ATG----CAAAGTAGACATTCATTCATTGT i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11068407 22 + 30473821 AGG----CAAAGTCGG----CATTCATGGT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45773311 26 - 149736546 GTGTCAACAAAGTAAA----TAGTCACTGT i mm10.chr6 C 0 C 0 s canFam3.chr20 16602424 22 + 58134056 ATG----CAAAGTAGA----AACTCCTCGT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1847199 22 - 2187301 CTG----CAAAATAGA----TATTCATCAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 28126 912 + 635616 I e eulMac1.LGHX01000499v1 27988 912 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e papAnu3.chr2 59556693 1068 + 187378091 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I e nomLeu3.chr21 67585003 105 + 86207423 I a score=879680.000000 s hg38.chrUn_KI270749v1 110920 76 + 158759 GGGTGGAAGAAAA--TAAAAA------TATTTATATTAACCAAGTCTAAGTGCAA--------CAG-CTCAATTAATACA-----------------------------AAACAT--TAATTTA s panTro5.chr3 201998135 76 - 202621043 GGGTGGAAGAAAA--TAAAAA------TATTTATATCAACCAAGTCTAAGTGCAA--------CAG-CTCAATTAATACA-----------------------------AAACAT--TAATTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766172 76 - 205426864 GGGTGGAAGAAAA--TAAAAA------TATTTATATCAACCAAGTCTAAGTGCAA--------CAG-CTCAATTAATACA-----------------------------AAACAT--TAATTTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585108 76 + 86207423 GGGTGGAAGAAAA--TAAAAA------TACTTATATTAACCAAGTCTAAGTGCAA--------CAG-CTCAATTAATACA-----------------------------AAACAT--TAATTTA i nomLeu3.chr21 I 105 C 0 s rheMac8.chr2 66066065 76 + 204787373 GGGTGGAAGAAAA--TAAAAA------TATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCGATTAATACA-----------------------------AAACAT--TAATATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997914 76 - 192460366 GGGTGGAAGAAAA--TAAAAA------TATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCGATTAATACA-----------------------------AAACAT--TAATATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109880 76 - 17224310 GGGTGGAAGAAAA--TAAAAA------TATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCGATTAATACA-----------------------------AAACAT--TAATATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422061 76 - 41321030 GGGTGGAAGAAAA--TAAAAA------TATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCGATTAATACA-----------------------------AAACAT--TAATATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493538 76 - 101219884 GGGTGGAAGAAAA--TAAAAA------TATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCAATTAATACA-----------------------------AAACAT--TAATATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879505 76 - 924385 GGGTGGAAGAAAA--TAAAAA------TATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCGATTAATACA-----------------------------AAACAT--TAATATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720500 76 - 10587913 GGGTGGAAGAAAA--TAAAAA------TATTTGTGTTAACCAAGTCTAAGTGCAA--------TAG-CTCGGTTAATACA-----------------------------AAACAT--TAATATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055648 76 - 98464013 GGGTGGAAGAAAA--TAAAAA------TATTTCTATTAACCAGGTCTAAGTGCAA--------TAG-CTCGATTAATACA-----------------------------AAACAT--TAATTTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727239 76 + 27742158 GGGTGGAAGAAAA--TAAAAA------TATTTCTATTAACTAGGTCTAAGTGCAA--------CAA-CTCAATTAATGCA-----------------------------AAACAT--TAATTTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264672 76 - 4835464 GGGTAGAAGAAAA--TAAAAA------TATTTCTATTAACAAGGTCTAAGCGCAA--------CAG-CTCAATTAATGCA-----------------------------AAACAT--TAATTTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723577 76 + 4093027 GAGTGGAAGAAAA--TAAAAA------TATTTCTATTAACTAGGCCTAAGTGCAA--------CAG-CTCAATTAATGTA-----------------------------AAACAT--TAATTTA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1618419 75 - 9149476 GGATGGAAGAAGA--AAAAAA-------ATTTCTATTAACAAAGTCTAAGTGGAA--------TAG-CTTGATTAATAGA-----------------------------AAACAT--TAATTTA i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11068429 81 + 30473821 GGGTGAAAGAAAATTACAAAATATACATATTTCTATTAATAAAGTCAAAGTTCAA--------CAA-CTTGATTAATAGA-----------------------------AAATAT--TATT--- i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45773337 85 - 149736546 -GGTGGTAGGAAA--TAAGAA------TGTTTCCAATAACAAAGTAGAATCTTAATAAAAATGCAG-CCCCAATAATGCT-----------------------------ATGCTTCCTAAGTTA i mm10.chr6 C 0 C 0 s canFam3.chr20 16602446 106 + 58134056 AGGTGGGAGTGAA--TAAAAA------TATTTCTATTAACAAAGTCTAAGGGTAA--------CAGACTTaaaaaaaaaaagaaagaaaagaaaaaaacaaaaaCCAGGAAACAT--TCACTTA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1847221 75 - 2187301 GGATGGAGGAAAA---GAAAA------TATTTCCATTATCAATGTCTAAGGGTCA--------CAG-TTTGAGAAAAACA-------------------------TAAGGAACAT--TTA---- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 28126 912 + 635616 I e eulMac1.LGHX01000499v1 27988 912 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e papAnu3.chr2 59556693 1068 + 187378091 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I a score=452959.000000 s hg38.chrUn_KI270749v1 110996 44 + 158759 TTTTGGGCTTGGTTGTAAAATTAGTTTTAGATTGAGCTTATAAA s panTro5.chr3 201998211 44 - 202621043 TTTTGGGCTTGGTTGTAAAATTAGTTTTAGATTGAGCTTATAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766248 44 - 205426864 TTTTGGGCTTGGTTGTAAAATTAGTTTTAGATTGAGCTTATAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585184 44 + 86207423 TTTTGGGCTCGGTTGTAAAATTAGTTTTAGATTGAGCTTATAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066141 44 + 204787373 TTTTGGGCTGGGTTGTAAAATTAGTTGTAGATTGAGCTTATAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997990 44 - 192460366 TTTTGGGCTGGGTTGTAAAATTAGTTGTAGATTGAGCTTATAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109956 44 - 17224310 TTTTGGGCTGGGTTGTAAAATTAGTTGTAGATTGAGCTTATAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422137 44 - 41321030 TTTTGGGCTGGGTTGTAAAATCAGTTGTAGATTGAGCTTATAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493614 44 - 101219884 TTTTGGGCTGGGTTGTAAAATTAGTTGTAGATTGAGCTTATAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879581 44 - 924385 TTTTGGGCTGGGTTGTAAAATTAGTTGTAGATTGAGCTTATAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720576 44 - 10587913 TTTTGGGCTGGGTTGTAAAATTAGCTGTAGATTGAACTTATACA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055724 32 - 98464013 TTTTGGGC------------TCAGTTTTAGATTGAGTTTATAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727315 32 + 27742158 TTTTGGGC------------TCAGTTTTAGATTGAGTTTACAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264748 30 - 4835464 TTTTGGGC------------TCAGTTTTAGATT--GTTTGTCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723653 32 + 4093027 TTTTAGGC------------TCAGTTTTAGATTGAGTTTATAAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1618494 44 - 9149476 TGTGGGGCTACATTGTAAAATCTGTTATAGATTGAGTTTATAAA i micMur3.chr32 C 0 I 1332 s eulMac1.LGHX01000499v1 28900 44 + 631505 GGTGGAGCTACATTGTAAAGTCTGTTATAGATTGAGTTTATAAA i eulMac1.LGHX01000499v1 I 912 C 0 s eulFla1.LGHW01000501v1 29038 44 + 635616 GGTGGAGCTACATTGTAAAGTCTGTTATAGATTGAGTTTATAAA i eulFla1.LGHW01000501v1 I 912 C 0 s otoGar3.GL873534 11068512 39 + 30473821 TTGAGGGCTAA-----AAAATCTGGTATAGATTGAGTTTATAAA i otoGar3.GL873534 I 2 C 0 s mm10.chr6 45773422 24 - 149736546 ----------------CAAATCTGTCGCAGG----GTTTATGCA i mm10.chr6 C 0 C 0 s canFam3.chr20 16602552 44 + 58134056 CATTGGGCTAAATAATAAAATCAGTTGCACACTGTTTTTATAAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1847296 43 - 2187301 TTTTAGGATAAATTATGAA-TCAGTTAAAGACTGACTTCATAAA i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e papAnu3.chr2 59556693 1068 + 187378091 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I a score=1111167.000000 s hg38.chrUn_KI270749v1 111040 107 + 158759 GTAAT-TAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA----C--------------AGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactgatgcataaacag----aaaaaaaa s panTro5.chr3 201998255 105 - 202621043 GTAAT-TAGGCTAATACT--GTCTCCTCTGAGAGGAACCTGGAA----C--------------AGTGCTATACCATCTGTCCagttgattgtctaaa-----gaaagaaaccgatgcataaacag------aaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766292 105 - 205426864 GTAAT-TAGGCTAATACT--GTCTCCTCTGAGAGGAACCTGGAA----C--------------AGTGCTATACCATCTGTCCagttgattgtctaaa-----gaaagaaaccgatgcataaacag------aaaaaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585228 105 + 86207423 GTTAT-TAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA----C--------------AGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactgatgcacaaacag------aaaaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066185 105 + 204787373 ATTAT-TAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA----C--------------AGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactgatgcatagacag------aaaaaa i rheMac8.chr2 C 0 I 4 s macFas5.chr2 60998034 105 - 192460366 ATTAT-TAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA----C--------------AGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactgatgcatagacag------aaaaaa i macFas5.chr2 C 0 I 4 s macNem1.NW_012018021v1 11110000 105 - 17224310 ATTAT-TAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA----C--------------AATGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactgatgcatagacag------aaaaaa i macNem1.NW_012018021v1 C 0 I 4 s cerAty1.NW_012009469v1 17422181 105 - 41321030 ATTAT-TAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA----T--------------GGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactgatgcatagacag------aaaaaa i cerAty1.NW_012009469v1 C 0 I 4 s chlSab2.chr22 64493658 105 - 101219884 ATTAT-TAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA----C--------------AGTGCTATACCATCTGTCCagttcactgtctaaa-----gaaagaaactgatgcatagacag------aaaaaa i chlSab2.chr22 C 0 I 5 s manLeu1.NW_012098965v1 879625 104 - 924385 ATTAT-TAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA----C--------------AGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactgatgcatagacag-------aaaaa i manLeu1.NW_012098965v1 C 0 I 5 s colAng1.NW_012114711v1 6720620 105 - 10587913 ATTAT-TAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA----C--------------AGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactgatacataaacag------aaaaaa i colAng1.NW_012114711v1 C 0 I 3 s calJac3.chr15 46055756 110 - 98464013 ATCAT-TAGGCCAATATT--GTCTCCTCTGAACTGAACCTGGAAGACCA--------------AGTGCTATACCATCTCTTCagatcattgtctaaa-----gaaagaaactgacacataaacag-----aaaaaaa i calJac3.chr15 C 0 I 2 s saiBol1.JH378125 27727347 109 + 27742158 ATCAT-TAGGCCAATATC--ATCTCCTCTGAACTGAACCTGGAAGAGCA--------------AGTTCTATATGGTTTCTCCagatcattgtctaaa-----gaaagaaactgatgcataaacag------aaaaaa i saiBol1.JH378125 C 0 I 2 s cebCap1.NW_016107467v1 264778 115 - 4835464 ATCAT-TAGGCCAATATT--GTCTCATCTGAACTGAACCTGGAAGAGCA--------------AGTTCTATACCATTTCTCCagatcattgtctaaa-----gaaagaagctgatgcataaacagaaaaaaaaaaaa i cebCap1.NW_016107467v1 C 0 I 2 s aotNan1.NW_018502033v1 3723685 114 + 4093027 ATCAT-TAAGCCAATATT--GTCTCCTCTGAACTGAACCTGGAAGAGCA--------------AGTTCTATACCATTTCTCCagatcactgtctaaa-----gaaagaaactgatgcataaacag-aaaaaaaaaaa i aotNan1.NW_018502033v1 C 0 I 2 s eulMac1.LGHX01000499v1 28944 109 + 631505 TTTAT-AAGATCAATATT--GTCTCCACTGGGCTAAACCTGCAA----T----------GTGAGGTGATGTAGTGTccctcaaattcatggtctaaa-----ggaggaaattgatggataaacag------aaaaaa i eulMac1.LGHX01000499v1 C 0 I 3 s eulFla1.LGHW01000501v1 29082 109 + 635616 TTTAT-AAGATCAATATT--GTCTCCACTGGGCTAAACCTGCAA----T----------GTGAGGTGATGTAGTGTccctcaaattcatggtctaaa-----ggaggaaattgatggataaacag------aaaaaa i eulFla1.LGHW01000501v1 C 0 I 3 s otoGar3.GL873534 11068551 112 + 30473821 TTCAT-GAGACCAATATT--ATGTCTACTGAACTAAACCTGGAA----T---------AGTGAGGTGCTGGACCACCTCTGAAATTCATGGTCTAAA-----GGAGGAAATTGAAAACTAAACAG----AAAAAAAA i otoGar3.GL873534 C 0 I 3 s mm10.chr6 45773446 107 - 149736546 -TTATCTGAAGCAATATT--GCCTCCACTGGAGTGAACCTAGGA----T--------AACAGGGATGTGATACAATCCCTTC----TTTAGTCTAGT-----AGAGGAAAGCTCAGCACACAGAG------ACAAGC i mm10.chr6 C 0 I 2 s canFam3.chr20 16602596 96 + 58134056 TTCAT-TGGACTAACAGA--GTCTCCTCTGGACTAAACCTGGAA----T--------------AGCAA-GTACCACCTG---AGTTTGCAGTCTAAG-----GGAGGA-----CCAAAGGAGGGG------AAAAAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1847339 119 - 2187301 TTCGT-TACACTAGTATTAAGTCTTCACTGAACCAAACCTggaa----taaaaaggtaaataaggcactgtgc------tccacttgagggaggaaacagatgggagaaaatgatccattaatag------aaaat- i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e papAnu3.chr2 59556693 1068 + 187378091 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I a score=4556.000000 s hg38.chrUn_KI270749v1 111147 1 + 158759 -a s panTro5.chr3 201998360 1 - 202621043 -a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766397 1 - 205426864 -a i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585333 1 + 86207423 -a i nomLeu3.chr21 C 0 I 4 s rheMac8.chr2 66066294 1 + 204787373 -a i rheMac8.chr2 I 4 C 0 s macFas5.chr2 60998143 1 - 192460366 -a i macFas5.chr2 I 4 C 0 s macNem1.NW_012018021v1 11110109 1 - 17224310 -a i macNem1.NW_012018021v1 I 4 C 0 s cerAty1.NW_012009469v1 17422290 1 - 41321030 -a i cerAty1.NW_012009469v1 I 4 C 0 s papAnu3.chr2 59557761 1 + 187378091 -a i papAnu3.chr2 I 1068 I 98 s chlSab2.chr22 64493768 1 - 101219884 -a i chlSab2.chr22 I 5 C 0 s manLeu1.NW_012098965v1 879734 1 - 924385 -a i manLeu1.NW_012098965v1 I 5 C 0 s calJac3.chr15 46055868 1 - 98464013 -a i calJac3.chr15 I 2 I 2 s saiBol1.JH378125 27727458 1 + 27742158 -a i saiBol1.JH378125 I 2 I 2 s cebCap1.NW_016107467v1 264895 1 - 4835464 -a i cebCap1.NW_016107467v1 I 2 I 2 s aotNan1.NW_018502033v1 3723801 1 + 4093027 -a i aotNan1.NW_018502033v1 I 2 I 2 s mm10.chr6 45773555 1 - 149736546 -A i mm10.chr6 I 2 I 5 s canFam3.chr20 16602692 1 + 58134056 -A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1847458 1 - 2187301 c- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29191 3 + 635616 I e eulMac1.LGHX01000499v1 29053 3 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1378695 1065 - 1467263 I e nasLar1.chr2 57728169 1066 + 181502896 I e ponAbe2.chr3 69654453 1064 + 202140232 I e rhiBie1.NW_016820128v1 1232935 1064 - 2311269 I e tarSyr2.KE939134v1 177326 1087 + 958716 I e otoGar3.GL873534 11068663 3 + 30473821 I e colAng1.NW_012114711v1 6720725 3 - 10587913 I a score=14972.000000 s hg38.chrUn_KI270749v1 111148 1 + 158759 a s panTro5.chr3 201998361 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766398 1 - 205426864 a i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69655517 1 + 202140232 a i ponAbe2.chr3 I 1064 I 1487 s nomLeu3.chr21 67585338 1 + 86207423 a i nomLeu3.chr21 I 4 C 0 s nasLar1.chr2 57729235 1 + 181502896 a i nasLar1.chr2 I 1066 I 99 s colAng1.NW_012114711v1 6720728 1 - 10587913 a i colAng1.NW_012114711v1 I 3 C 0 s rhiRox1.KN296641v1 1379760 1 - 1467263 a i rhiRox1.KN296641v1 I 1065 I 99 s rhiBie1.NW_016820128v1 1233999 1 - 2311269 a i rhiBie1.NW_016820128v1 I 1064 I 99 s calJac3.chr15 46055871 1 - 98464013 a i calJac3.chr15 I 2 C 0 s saiBol1.JH378125 27727461 1 + 27742158 a i saiBol1.JH378125 I 2 C 0 s cebCap1.NW_016107467v1 264898 1 - 4835464 a i cebCap1.NW_016107467v1 I 2 C 0 s aotNan1.NW_018502033v1 3723804 1 + 4093027 a i aotNan1.NW_018502033v1 I 2 C 0 s tarSyr2.KE939134v1 178413 1 + 958716 a i tarSyr2.KE939134v1 I 1087 I 2014 s eulMac1.LGHX01000499v1 29056 1 + 631505 a i eulMac1.LGHX01000499v1 I 3 C 0 s eulFla1.LGHW01000501v1 29194 1 + 635616 a i eulFla1.LGHW01000501v1 I 3 C 0 s otoGar3.GL873534 11068666 1 + 30473821 A i otoGar3.GL873534 I 3 C 0 s mm10.chr6 45773561 1 - 149736546 A i mm10.chr6 I 5 C 0 s canFam3.chr20 16602693 1 + 58134056 G i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1847459 1 - 2187301 a i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e papAnu3.chr2 59557762 98 + 187378091 I e manLeu1.NW_012098965v1 879735 0 - 924385 C e macNem1.NW_012018021v1 11110110 0 - 17224310 C e rheMac8.chr2 66066295 0 + 204787373 C e chlSab2.chr22 64493769 0 - 101219884 C e cerAty1.NW_012009469v1 17422291 0 - 41321030 C e macFas5.chr2 60998144 0 - 192460366 C a score=329047.000000 s hg38.chrUn_KI270749v1 111149 25 + 158759 caatggattgt-gataatttctcaaa s panTro5.chr3 201998362 25 - 202621043 caatggattgt-gataatttctcaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766399 25 - 205426864 caatggattgt-gataatttctcaaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585339 25 + 86207423 caatggattgt-gataatttctcaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066295 25 + 204787373 caatggattgt-gataatttctcaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998144 25 - 192460366 caatggattgt-gataatttctcaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110110 25 - 17224310 caatggattgt-gataatttctcaaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422291 25 - 41321030 caagggattgt-gataatttctcaaa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493769 25 - 101219884 caatggattgt-gataatttctcaaa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879735 25 - 924385 caatggattgt-gataatttctcaaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720729 25 - 10587913 caatggattgt-gataatttctcaaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055872 25 - 98464013 caatgaattgt-gatcatttcttaag i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727462 25 + 27742158 caatgaattgt-gatcatttcttaag i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264899 25 - 4835464 caatgaattgc-gatcatttcttaag i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723805 25 + 4093027 caatgaattgc-gatcatttcttaag i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 29057 25 + 631505 caatggattgt-ggttagctctcaag i eulMac1.LGHX01000499v1 C 0 I 31 s eulFla1.LGHW01000501v1 29195 25 + 635616 caatggattgt-ggttagctctcaag i eulFla1.LGHW01000501v1 C 0 I 31 s otoGar3.GL873534 11068667 25 + 30473821 CAATGGATTGT-GGTTAGTTCTGAAG i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45773562 24 - 149736546 CAATGCATTGT-GGTCA-TTCTCAAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16602694 23 + 58134056 CAA--AATTGG-TAAAAGTTCTCAAG i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1847460 26 - 2187301 caataagttgcagttaagtcctcaag i dasNov3.JH563077 C 0 I 1 e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379761 99 - 1467263 I e papAnu3.chr2 59557762 98 + 187378091 I e nasLar1.chr2 57729236 99 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234000 99 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I a score=188763.000000 s hg38.chrUn_KI270749v1 111174 28 + 158759 aaatgtatgat-gaagtgttacagcagc--a-- s panTro5.chr3 201998387 28 - 202621043 aaatgtacgat-gaagtgttatagcagc--a-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766424 28 - 205426864 aaatgtacgat-gaagtgttatagcagc--a-- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585364 28 + 86207423 aaatgtctgat-gaagtgttataggagc--a-- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066320 28 + 204787373 aaaagtatggt-gaagtgttataggagc--a-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998169 28 - 192460366 aaaagtatggt-gaagtgttataggagc--a-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110135 28 - 17224310 aaaagtatggt-gaagtgttataggagc--a-- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422316 28 - 41321030 aaaagtatggt-gaagtgttataggagc--a-- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493794 28 - 101219884 aaaagtatgat-gaagtgttataggagc--a-- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879760 28 - 924385 aaaagtatggt-gaagtgttataggagc--a-- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720754 27 - 10587913 aaaggtatgat-gaagtg-tataggagc--a-- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055897 31 - 98464013 aaaagtatgagaggagtgtcataggagcaaa-- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727487 31 + 27742158 aaaggtatgagagaaatgttataggagcaaa-- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264924 31 - 4835464 aaaggtatgagaggagtgttatgggagcaaa-- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723830 31 + 4093027 aaaggtatgagaggagtgttataagagcaaa-- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11068693 23 + 30473821 ACAGATATGAG-AGAAAGCCATAA--------- i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45773586 27 - 149736546 AGAGATATGCT-AGAGCACCACAGGTCT----- i mm10.chr6 C 0 C 0 s canFam3.chr20 16602718 28 + 58134056 AGAAGTATCAT-GGAGGGTAATAGAAGA--A-- i canFam3.chr20 I 1 I 1 s dasNov3.JH563077 1847487 30 - 2187301 aaagaaaagac-agagtgtcataggagc--aaa i dasNov3.JH563077 I 1 C 0 e eulFla1.LGHW01000501v1 29220 31 + 635616 I e eulMac1.LGHX01000499v1 29082 31 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379761 99 - 1467263 I e papAnu3.chr2 59557762 98 + 187378091 I e nasLar1.chr2 57729236 99 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234000 99 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I a score=567162.000000 s hg38.chrUn_KI270749v1 111202 42 + 158759 gagtagga-------gcagcacttgagatttgagaagatcctcaaagaa s panTro5.chr3 201998415 42 - 202621043 gagtagga-------gcagcacttgagatttgagaagatcctcaaagaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766452 42 - 205426864 gagtagga-------gcagcacttgagatttgagaagatcctcaaagaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585392 42 + 86207423 gagtagga-------gcagcacttgaggtttgagaagatcctcaaagaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066348 42 + 204787373 gagtagga-------gcagcacttgagatttgagaagatcctcaaagaa i rheMac8.chr2 C 0 I 3 s macFas5.chr2 60998197 42 - 192460366 gagtagga-------gcagcacttgagatttgagaagatcctcaaagaa i macFas5.chr2 C 0 I 3 s macNem1.NW_012018021v1 11110163 42 - 17224310 gagtagga-------gcagcacttgagatttgagaagatcctcaaagaa i macNem1.NW_012018021v1 C 0 I 3 s cerAty1.NW_012009469v1 17422344 42 - 41321030 gagtagga-------gcagcacttgagatttgagaagatcctcaaagaa i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64493822 42 - 101219884 gagtagga-------gcagcacttgagatttgagaagatcctcaaagaa i chlSab2.chr22 C 0 I 3 s manLeu1.NW_012098965v1 879788 42 - 924385 gagtagga-------tcagcacttgagatttgagaagatcctcaaagaa i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6720781 42 - 10587913 gagtagga-------gcagcacttgagatttgagaagatcctcagagaa i colAng1.NW_012114711v1 C 0 I 3 s calJac3.chr15 46055928 42 - 98464013 gagtagga-------gtagcacttgagattggagaaggtcctcaaggaa i calJac3.chr15 C 0 I 3 s saiBol1.JH378125 27727518 39 + 27742158 gagtagga-------gcagcacttgagattggagaaggtcctca---aa i saiBol1.JH378125 C 0 I 3 s cebCap1.NW_016107467v1 264955 42 - 4835464 gagtagga-------gcagcacttgagattgaagaaggtcctcaaagaa i cebCap1.NW_016107467v1 C 0 I 3 s aotNan1.NW_018502033v1 3723861 42 + 4093027 gagtagga-------gcagcacttgagattggagaaggtcctcaaagaa i aotNan1.NW_018502033v1 C 0 I 3 s eulMac1.LGHX01000499v1 29113 42 + 631505 gagtagga-------gcagcatttgggatttgagaaagactgcaaggaa i eulMac1.LGHX01000499v1 I 31 C 0 s eulFla1.LGHW01000501v1 29251 42 + 635616 gagtagga-------gcagcatttgggatttgagaaagactgcaaggaa i eulFla1.LGHW01000501v1 I 31 C 0 s otoGar3.GL873534 11068716 39 + 30473821 GAGAAGGA-------GCAGCGTTTGGGATTTGAAAAAAATTTCAAG--- i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45773613 46 - 149736546 ---GAGGACACCTTGGCTGTATTTGGCTGTGGAGAAACTGGTAAAAGAA i mm10.chr6 C 0 I 4 s canFam3.chr20 16602747 42 + 58134056 CAGTAGGA-------AGAGCACTTCAGGTTTGAGAAAGATTGTAAGGAA i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1847517 42 - 2187301 gagtagaa-------acagccctttggagttgagaaaaaatccaaagag i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379761 99 - 1467263 I e papAnu3.chr2 59557762 98 + 187378091 I e nasLar1.chr2 57729236 99 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234000 99 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I a score=67666.000000 s hg38.chrUn_KI270749v1 111244 3 + 158759 gag s panTro5.chr3 201998457 3 - 202621043 gag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766494 3 - 205426864 gag i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585434 3 + 86207423 gag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066393 3 + 204787373 gag i rheMac8.chr2 I 3 C 0 s macFas5.chr2 60998242 3 - 192460366 gag i macFas5.chr2 I 3 C 0 s macNem1.NW_012018021v1 11110208 3 - 17224310 gag i macNem1.NW_012018021v1 I 3 C 0 s cerAty1.NW_012009469v1 17422389 3 - 41321030 gag i cerAty1.NW_012009469v1 I 3 C 0 s papAnu3.chr2 59557860 3 + 187378091 gag i papAnu3.chr2 I 98 I 3221 s chlSab2.chr22 64493867 3 - 101219884 gag i chlSab2.chr22 I 3 C 0 s manLeu1.NW_012098965v1 879833 3 - 924385 gag i manLeu1.NW_012098965v1 I 3 C 0 s nasLar1.chr2 57729335 3 + 181502896 gag i nasLar1.chr2 I 99 I 1379 s colAng1.NW_012114711v1 6720826 3 - 10587913 gag i colAng1.NW_012114711v1 I 3 C 0 s rhiRox1.KN296641v1 1379860 3 - 1467263 gag i rhiRox1.KN296641v1 I 99 I 1388 s rhiBie1.NW_016820128v1 1234099 3 - 2311269 gag i rhiBie1.NW_016820128v1 I 99 I 1386 s calJac3.chr15 46055973 3 - 98464013 gag i calJac3.chr15 I 3 C 0 s saiBol1.JH378125 27727560 3 + 27742158 gag i saiBol1.JH378125 I 3 C 0 s cebCap1.NW_016107467v1 265000 3 - 4835464 gag i cebCap1.NW_016107467v1 I 3 C 0 s aotNan1.NW_018502033v1 3723906 3 + 4093027 gcg i aotNan1.NW_018502033v1 I 3 C 0 s eulMac1.LGHX01000499v1 29155 3 + 631505 gag i eulMac1.LGHX01000499v1 C 0 I 3 s eulFla1.LGHW01000501v1 29293 3 + 635616 gag i eulFla1.LGHW01000501v1 C 0 I 3 s mm10.chr6 45773663 3 - 149736546 AAG i mm10.chr6 I 4 C 0 s canFam3.chr20 16602789 3 + 58134056 GAG i canFam3.chr20 C 0 I 3 s dasNov3.JH563077 1847559 3 - 2187301 gat i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e ponAbe2.chr3 69655518 1487 + 202140232 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068755 2 + 30473821 I a score=121330.000000 s hg38.chrUn_KI270749v1 111247 10 + 158759 tttag--cccat s panTro5.chr3 201998460 10 - 202621043 tttag--cccat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766497 10 - 205426864 tttag--cccat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585437 10 + 86207423 tttag--accat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066396 10 + 204787373 tttag--cccat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998245 10 - 192460366 tttag--cccat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110211 10 - 17224310 tttag--cccat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422392 10 - 41321030 tttag--cccat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493870 10 - 101219884 tttag--cccat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879836 10 - 924385 tttag--cccat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720829 10 - 10587913 tttag--cccat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055976 10 - 98464013 tttag--cccat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727563 10 + 27742158 tttag--cccat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265003 10 - 4835464 tttag--cccat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723909 10 + 4093027 tttag--cccat i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 29161 10 + 631505 ttagg--tctac i eulMac1.LGHX01000499v1 I 3 I 67 s eulFla1.LGHW01000501v1 29299 10 + 635616 ttagg--tctac i eulFla1.LGHW01000501v1 I 3 I 67 s otoGar3.GL873534 11068757 10 + 30473821 CAAGA--CCCAT i otoGar3.GL873534 I 2 C 0 s mm10.chr6 45773666 11 - 149736546 -TTGGGTTTCAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16602795 10 + 58134056 TTTGG--CTCAG i canFam3.chr20 I 3 C 0 s dasNov3.JH563077 1847562 9 - 2187301 -tttg--cccat i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379863 1388 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57729338 1379 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234102 1386 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I a score=189914.000000 s hg38.chrUn_KI270749v1 111257 14 + 158759 gtattgaaagataa s panTro5.chr3 201998470 14 - 202621043 gtattgaaagataa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766507 14 - 205426864 gtattgaaagataa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585447 14 + 86207423 gtattgaaagataa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066406 14 + 204787373 gtattgaaaggtaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998255 14 - 192460366 gtattgaaaggtaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110221 14 - 17224310 gtattgaaagataa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422402 14 - 41321030 gtattgaaagataa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493880 14 - 101219884 gtattgaaagataa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879846 14 - 924385 gtattgaaagataa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720839 14 - 10587913 gtattgaaaggtaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055986 14 - 98464013 gtattgaaagataa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727573 14 + 27742158 gtattgaaagataa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265013 14 - 4835464 gtattgaaagataa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723919 14 + 4093027 gtattgaaagataa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11068767 13 + 30473821 -TTTTAAAAGaaaa i otoGar3.GL873534 C 0 I 160 s mm10.chr6 45773677 14 - 149736546 GGATTGAAAGATGA i mm10.chr6 C 0 C 0 s canFam3.chr20 16602805 14 + 58134056 GTATTAAAAGATAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1847571 14 - 2187301 gtactgaaggatga i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29309 67 + 635616 I e eulMac1.LGHX01000499v1 29171 67 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379863 1388 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57729338 1379 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234102 1386 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I a score=308137.000000 s hg38.chrUn_KI270749v1 111271 30 + 158759 gtgggaatttgtcaatgagag-gtgaaagaa s panTro5.chr3 201998484 30 - 202621043 gtgggaatttgtcaatgagag-gtgaaagaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766521 30 - 205426864 gtgggaatttgtcaatgagag-gtgaaagaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585461 30 + 86207423 gtgggaatttgtcagtgagag-gtgaaagaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066420 30 + 204787373 gtgggaatttgtcattgagag-gtgaaagga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998269 30 - 192460366 gtgggaatttgtcattgagag-gtgaaagga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110235 30 - 17224310 gtgggaatttgtcattgagag-gtgaaagga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422416 30 - 41321030 gtgggaatttgtcattgagag-gtgaaagga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493894 30 - 101219884 gtgggaatttgtcattgagag-gttaaagga i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879860 30 - 924385 gtgggaatttgtcattgagag-gtgaaagga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720853 30 - 10587913 gtgggaatttgtcattgagag-gtgaaagga i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056000 30 - 98464013 gtagaaatttgtcattgagag-gtaaaagaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727587 30 + 27742158 gtaggaatttgtcattgagag-gtaaaagaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265027 30 - 4835464 gtaggaatttgtcattgagag-gtaaaagaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723933 30 + 4093027 gtaggaatttgtcattgagag-gtaaaagaa i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45773691 30 - 149736546 ATGGAAATGTGACATCCACAG-AAGAAAGAA i mm10.chr6 C 0 I 148 s canFam3.chr20 16602819 30 + 58134056 GTAGGGATCTGCCACCAAAAG-GTTGGAATA i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1847585 30 - 2187301 gtag-ATTTCATCATTAACAGAGTAAAAGAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29309 67 + 635616 I e eulMac1.LGHX01000499v1 29171 67 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379863 1388 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57729338 1379 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234102 1386 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=195205.000000 s hg38.chrUn_KI270749v1 111301 20 + 158759 ggcattctgtgcaTATCTGT s panTro5.chr3 201998514 20 - 202621043 ggcattctgtgcaTATCTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766551 20 - 205426864 ggcattctgtgcaTATCTGT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585491 20 + 86207423 ggcattctgtgcaTATCTGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066450 20 + 204787373 ggCATTCTGTCCATATTCGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998299 20 - 192460366 ggCATTCTGTCCATATTCGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110265 20 - 17224310 ggCATTCTGTCCATATTTGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422446 20 - 41321030 ggCATTCTGTCCATATTCGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493924 20 - 101219884 ggCATTCTGTCCATATTTGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879890 20 - 924385 ggCATTCTGTCCATATTCGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720883 20 - 10587913 ggCATTCTGTCCATATTTGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056030 20 - 98464013 ggcattctgtgcacatctgt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727617 20 + 27742158 ggcattctgtgcacatctgc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265057 20 - 4835464 ggcattctgtgcacatctgc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723963 20 + 4093027 ggcattctctacacatgtgc i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45773869 20 - 149736546 GACATCCCATCCATATCTGC i mm10.chr6 I 148 C 0 s canFam3.chr20 16602850 20 + 58134056 GGAATTCCATGCATACCTGT i canFam3.chr20 I 1 I 3 s dasNov3.JH563077 1847615 20 - 2187301 GATAGTCTACATATGCCTAT i dasNov3.JH563077 C 0 I 3 e eulFla1.LGHW01000501v1 29309 67 + 635616 I e eulMac1.LGHX01000499v1 29171 67 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379863 1388 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57729338 1379 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234102 1386 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=33801.000000 s hg38.chrUn_KI270749v1 111321 2 + 158759 GA s panTro5.chr3 201998534 2 - 202621043 GA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766571 2 - 205426864 GA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585511 2 + 86207423 GA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066470 2 + 204787373 GA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998319 2 - 192460366 GA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110285 2 - 17224310 GA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422466 2 - 41321030 GA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493944 2 - 101219884 GA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879910 2 - 924385 GA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720903 2 - 10587913 GA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056050 2 - 98464013 ga i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727637 2 + 27742158 ga i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265077 2 - 4835464 ga i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723983 2 + 4093027 ga i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 29238 2 + 631505 GA i eulMac1.LGHX01000499v1 I 67 I 4393 s eulFla1.LGHW01000501v1 29376 2 + 635616 GA i eulFla1.LGHW01000501v1 I 67 I 4457 s mm10.chr6 45773889 2 - 149736546 AA i mm10.chr6 C 0 I 3 s canFam3.chr20 16602873 2 + 58134056 GA i canFam3.chr20 I 3 C 0 s dasNov3.JH563077 1847638 2 - 2187301 GA i dasNov3.JH563077 I 3 C 0 e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379863 1388 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57729338 1379 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234102 1386 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=2199262.000000 s hg38.chrUn_KI270749v1 111323 222 + 158759 TTTCCCAATGGCTAAGATATGAAGTACTTGCAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAACTTGGATTCATATTATATGTCTTGGTAAAAAATTGATTTTT-ATCTCT-CTTGGTCTTG-GGAATCAGTAGAAGCCTTTA-TTTTTTTCCCTTGAATAAG------ATTTTATTTTGAAATAGTTT--AAGATAAACAAGTTTTTAAAATAGTACAGAG------GTTC s panTro5.chr3 201998536 223 - 202621043 TTTCCCAATGGCTAAGATATGAACTACTTGCAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAACTTGGATTCATATTATATGTCTTGGTAAAAATTTGATTTTT-ATCTCT-CTTGGTCTTG-GGAATCAGTAGAAGCCTTTATTTTTTTTCCCTTGAATAAG------Attttattttgaaatagttt--aagataaacaagtttttaaaacagtacagag------attc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766573 223 - 205426864 TTTCCCAATGGCTAAGATATGAACTACTTGCAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAACTTGGATTCATATTATATGTCTTGGTAAAAATTTGATTTTT-ATCTCT-CTTGGTCTTG-GGAATCAGTAGAAGCCTTTATTTTTTTTCCCTTGAATAAG------Attttattttgaaatagttt--aagataaacaagtttttaaaacagtacagag------attc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585513 222 + 86207423 TTTCCCAATGGCTAAGATATGAACTACTTGCAACAATGAAGAAGAGTGATGATTAGAG------ACTTTAAAAACAATTTGGATTCATATTATATGTCTTGGTAAAAATTTGATTTTT-ATCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTA--TTTTTTCCCTTGAATAAG------Attttactttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066472 222 + 204787373 TTTCCCAATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTA--TTTTTTCCCTTGAATAAG------Attttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998321 222 - 192460366 TTTCCCAATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTG--TTTTTTCCCTTGAATAAG------Attttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110287 222 - 17224310 TTTCCCAATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTA--TTTTTTCCCTTGAATAAG------Attttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422468 222 - 41321030 TTTCCCAATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGTGGAATCAGTAGAAGCCTTTA--TTTTTTCCCTTGAATAAG------Attttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493946 222 - 101219884 TTTCCCAATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATAGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTA--TTTTTTCCCTTGAATAAG------Attttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879912 222 - 924385 TTTCCCAATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTA--TTTTTTCCCTTGAATAAG------Attttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720905 222 - 10587913 TTTCCCAATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATCTTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTA--TTTTTTCCCTTGAATAAG------Attttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056052 219 - 98464013 attcccagtggctaagatatgaactacTTGCAAGAATGAAGAAGGGTGATGATTACAG------AGTTTAAAAACAATTTGGATTTATATTATGGGTCTCGGTAAAAGTTTGATTTTT-ATCTCT-CTTGGCCTTGAGGAATCAGGAGAAG-GCT----TTTCCCCCtttgaataag------attttattttaaaatagtgt--aggataaacaagttcataaaataatacagag------attc i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727639 221 + 27742158 actcccaatggctaagatatgaactgcTTGCAAGAATGAAGAAGAGTGATGATTACAG------AGTTTAAAAACAATTAGGATTTATATTATATGTCTTGGTAAAAGTTTGATTTTTAATCTCT-CTTGTCCTTGAGGAATCAGTAGAAGCCCT----TTTCTGCCTTTGAGTAAG------ATTTTATTTTGAAATAGTGT--AGGATAAACAAGTTTATAAAATAATACAGAG------ATTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265079 210 - 4835464 actcccaatggctaagatatgaactacttgcaagaatgga----------gattacag------agtttaAAAACAATTTAGATTTATATTATATGTCTTGGTAAAAGTTTGATTTTT-ATCTGT-CTTGGCCTTGAGGAATCAGCAGAGGCCTT----TTCCCCCCTTTGAATAAG------ATTTTATTTTGAAATAGTGT--AGGATAAACAAGTTTATAAAATAATAAAGAG------ATTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723985 215 + 4093027 actcccaatggctaagatatgaactacTTGCAAGAATGAAGAAGAGTGATGATTACAG------AGTTTAAAAACAATTTGGATTTATATTATACGTCTTGGTAAAAGTTTGATTTTT-CTCTCT-CTTGGCCTTGATGAATCAGTAGAAGCCTT----TTTCCCCCTTT-----AG------ATTTTATTTTGAAATAGTGT--AGGATAAACAAGTTTATAAAATAATACAGAG------ATTC i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45773894 207 - 149736546 ACTAAGAATGGCTGAGATAACAACCACTTGTATAAATAAAAAGGATTGATATCTA-AG------AAAGTAAATTTATTTTGGACTTGCATTCTGTGCACTGATAAAACTTTGTATGTT-GTCCATGATTGGTCATGAGGAATCATTATAAGCCTC----TT-----------AAAAGATACATATTACAATTTGAAGTAGCTTAAAAGATTAACAAA----------AGAACAAAg------gtcc i mm10.chr6 I 3 I 1335 s canFam3.chr20 16602875 218 + 58134056 TTTCAGAATGGCTAAGATATAAACTACTTGTAAGAATTAAGAGGAATGATACTTAAGG------AAGTTAAAAATGATCTGCATTAACA-TGTATGCTTTGGTAAGAGTCTGGATTT--ACCTCT-CTGCACCTTGAGGAATCAGAAGCCTCCCTCATCTTTTTTTTTTT---TAAT------AGTTTATTTTGAATTAGCTA--AAGATGAACAAGTTT-TGAAATAGTACAGAG------ATTC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1847640 231 - 2187301 TTACAGAATGGCCAAAACATAAACCACTAGCAGGAATGAAGAGGAGTGATGTGTAAGGAAAGATAGTTTGAATATACTTTGGATTTACACTGTATTTCTTAGTAA-ATTTTGGATTTT-ATCTTT-CTTGGCCTCCAGAAATCAATAGAAGCCTTTC--TTTTTttcttt-aataat-------ttttatttggaaatagatt--aagaccagcaagttgaaaaaatagtatagagtcacatgttc i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379863 1388 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57729338 1379 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234102 1386 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=893146.000000 s hg38.chrUn_KI270749v1 111545 102 + 158759 CCAAAGAAACT-TGTAAGCAAAGAAGttcatccaaacc-aaaaaattgatataggt---atgctattaactagactacagatcata-ctgtgatttcatctactttt-G s panTro5.chr3 201998759 102 - 202621043 ccAAAGAAACT-TGTAAGCAAAGAAGttcatccaaacc-aaaaaactgatataggt---atgctattaactagactacagatcata-ctgtgatttcatctactttt-c i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766796 102 - 205426864 ccaaagaaact-tgtaagcaaagaagttcatccaaacc-aaaaaattgatataggt---atgctattaactagactacagatcata-ctgtgatttcatcTACCTTT-C i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585735 102 + 86207423 ccAAAGAAACT-TGTAAGCAAAGAAGttcatccaaacc-aaaaaattgatataggt---atactattaactagactacagatcgta-ttgtgatttcatctactttt-c i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066694 104 + 204787373 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998543 104 - 192460366 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-c i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110509 104 - 17224310 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-c i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422690 104 - 41321030 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-c i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64494168 104 - 101219884 ccaaagaacctctgtaagcaaagaagttcatacagaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-c i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 880134 104 - 924385 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-c i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6721127 104 - 10587913 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-c i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056271 105 - 98464013 ccaaataacctctgtaagcaaagaaattcattcaaacc--aaaaatcgatataggtgtaacactattaactagactacagatggta-ttgtgatttcatctactttt-c i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727860 105 + 27742158 CCAAATAACCTCTGTAAGCAAAGAAattcattcaaacc--aaaaattgatataggtataatgctattaactagactacagatggta-ttgggattttatctactttt-c i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265289 105 - 4835464 CCAAATAACCTCTGTAAGCAAAGAAatttattcaaacc--aaaaattgatataggtgtaatactattaactagactacagatggta-ttgtgatttcatctactttt-c i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3724200 105 + 4093027 CCAAATAACCTCTGTAAGCAAAGAAattaattcaaacc--aaaaattgatataggtgtaatactattaactagactacagatggta-ttgtgatttcatctactttt-c i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16603093 100 + 58134056 -CTATGTACCTGTCTTATCAAAAAAA-----AAAaaac-agaaaattaactttcatacaatgctattaattagactgcagacctta-ttcagatttcatcagctttta- i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1847871 98 - 2187301 ---------ctgtataaccaaagaaaactgtcaaaacc-aggaaatcgacattggtacaatactatcaattactagtgagacctaatttaagatttcaccagctttt-a i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e mm10.chr6 45774101 1335 - 149736546 I e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379863 1388 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57729338 1379 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234102 1386 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=1112836.000000 s hg38.chrUn_KI270749v1 111647 135 + 158759 -AGTCATCTTTTCTTCCC---TTAgtatatagttctat-agattccatgacatatatagattagtgta----------tcactacaatcaagatagagtactg----ttctatcaacat-aaagaaat---------ttatcttttaatagtcacaaccctcca s panTro5.chr3 201998861 135 - 202621043 -AGTCATCTTTTCTTCCC---TTAgtatatagttctat-aaattccatgacatatatagattggtgta----------tcactacaatcaagatagagtactg----ttctatcaacat-aaagaaat---------ttatcttttaatagtcacaaccctcca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766898 135 - 205426864 -AGTCATCTTTTCTTCCC---TTAgtatatagttctat-aaattccatgacatatatagattagtgta----------tcactacaatccagatagagtactg----ttctatcaacat-aaagaaat---------ttatcttttaatagtcacaaccctcca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585837 135 + 86207423 -agtcatctttccttccc---ttagtatatagttctat-aaattccatgacatacatagattagtgta----------tcactacaatcaagatagagtacta----ttctatcaccat-aaagaaat---------ttatcttttaatagtcacaaccttccg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066798 142 + 204787373 -AGTCAACTTTTCCTCCC---TTAgtatatagttctat-aaattccatgacaaatatagattagtgta----------tcactacaataaagatagagtaccg----tgatatcaccat-aaagaaatttctt--tgttatcttttaatagtcacaaccttcca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998647 142 - 192460366 -AGTCAACTTTTCCTCCC---TTAgtatatagttctat-aaattccatgacaaatatagattagtgta----------tcactacaataaagatagagtaccg----tgatatcaccat-aaagaaatttctt--tgttatcttttaatagtcacaaccttcca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110613 142 - 17224310 -AGTCAACTTTTCCTCCC---TTAgtatatagttctat-aaattccatgacaaatatagattagtgta----------tcactacaataaggatagagtaccg----tgatatcaccat-aaagaaatttctc--tgttatcttttaatagtcacaaccttcca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422794 142 - 41321030 -AGTCAACTTTTCCTCCC---TTAgtatatagttctat-aaattccatgacaaatatagattagtgta----------tcactacaataaggatagagtaccg----tgatatcaccat-aaagaaatttctt--tgttatcttttaatagtcacaaccttcca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64494272 142 - 101219884 -AGTCAACTTTTCCTCCC---TTAgtatatagttctat-aacatccatgacaaatatagattagtgta----------tcactacaatcaggatagagtactg----tgatatcaccat-aaagaaatttctt--tgttatcttttaatagtcacaaccttcca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 880238 142 - 924385 -AGTCAACTTTTCCTCCC---TTAgtatatagttctat-aaattccatgacaaatatagattagtgta----------tcactacaataaggatagagtaccg----tgatatcaccat-aaagaaatttctt--tgttatcttttaatagtcacaaccttcca i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6721231 142 - 10587913 -AGTCAACTTTTCCTCCC---TTAgtatatagttctat-aaattccatgatatatatagattagtgta----------ttactacaatcaggatagagtaccg----ttatatcaccac-aaagaaatttctt--tgttgtcttttaatagtcacaaccttcca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056376 132 - 98464013 -agtcatattttcttctc-----agtgtatagtgctat-aaattctataatgtatatagattagggta----------tcactacaatcaggatagagtaccg----ttctttcaccataaaaaaa-----------ttatcttttaatggtcacaaccttcca i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727965 133 + 27742158 -agtcatattttcttctc---tTAgtatataatgctat-aaattctataacatatatgtattagtgta----------tcactgcaatcaggatagggtacca----ttctttcaccat-aaaaaa-----------ttatcttttaatggtcacaaccttaca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265394 133 - 4835464 -aattatattttcttctC---TTAgtatattgtgctat-caattctataacatatatagatcagcgta----------tcactacaataaggatagagtaccg----ttctttcaccat-aaAAAA-----------TTAACTTTTAATGGTTACAACCTTCCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3724305 134 + 4093027 -agtcatattttcttctc---ttagtatatagtgctat-aaattctataacctatatagattggtgta----------tcactacaatcaggatagagtaccgt---ttttttcaccat-aaaaaa-----------ttatcttttaatggtcacaaccttcca i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16603194 154 + 58134056 -aggaa---tttcttccc---tcactgtatagttctttgaaatactttcacacatacatattcataaaaaacaggtagtcaccacaatcagtatacagaactgtttgttctatcatcat-aaagaaacttcctagggttatcccttaataattacacctctc-- i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1847969 145 - 2187301 catatactccatctccccaacttggtttataggtctg--aaatcctatcatatgtatagtttagtgta------accatcactacaaacagaatatagaactg----ttccatcactac-aaagaaactccctcaggatacccctttaaagttaaaaa------ i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e mm10.chr6 45774101 1335 - 149736546 I e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379863 1388 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57729338 1379 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234102 1386 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=7810165.000000 s hg38.chrUn_KI270749v1 111782 806 + 158759 cttcctcatacca-taacccctaataacc-actgatctgttctccatccctacat-ttcatcatatttaggcttttaaataaatagaatcacacagtaagtaaccttttgagat--------aggc-ttttttccca------cttagc-------ctc--aatatatattcaagttattgtgtctattaatagcttattc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgtttattcattcattcattgaacgacaattgagtttttccagattagggctattacaaataaagttcctatgcattttagtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagataaacactaaagattgtgatttatatgtcatgtgataaagatatggttaactttataaaagactgccaaactgtttttcagaataaatgtatcaatttacattctcaccaccaatgcaggagagatccagttgttccacatatttaccagcacttgatattgtcagcatggttttacttttcccattctattaagtgtatagtg--------gcatgttattgtagctttactttgcttttctctaatagctaatgatattgcatcAAAAACCTTTTAAACCTTTAAAAATGATATTATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGTCCAGGAATGAAagactaaggaacaactgagagtagggacacaagtcaggatgttcagctataggccagagaatagataaagtttgcctgaagtaaagt----attgacaaaaggcaaggagacc s panTro5.chr3 201998996 806 - 202621043 cttcctcatacca-taacccctaataacc-actgatctgttctccatcactacat-ttcatcatatttaggcttttaaataaatagaatcacacagtaagtaaccttttgagat--------aggc-ttttttccca------cttagc-------ctc--aatatatattcaagttattgtgtctattaatagcttattc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgcttattcattcattcattgaacgacaattgagtttttccagattagggctattacaaataaagttcctatgcattttagtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagataaacactaaagattgtgatttctatgtcatgtgataaagatatggttaactttataaaagactgccaaactgcttttcagaataaatgtatcgatttacattcccaccaccaatgcaggagagatccagttgttccacatatttatcagcacttgatattgtcagcatggttttacttttcccattctagtaagtgtatagcg--------gcatgttattgtagctttactttgcttttctctaatagctaatgatattgcatcAAAAACCTTTTAAACCTTTAAAAATGATATTATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATGTAACGAGATGTCCAGGAATGAAagactaaggaacaactgagagtagggacacaagtcaggatgttcagctataggccagagaatagatgaagtttgcctgaagtaaagt----attgacaaaaggcaaggagacg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767033 806 - 205426864 cttcctcatacca-taacccctaataacc-acagatctgttctccatcactacat-ttcatcatatttaggcttttaaataaatagaatcacacagtaagtaaccttttgagat--------aggc-ttttttccca------cttagc-------ctc--aatatatattcaagttattgtgtctattaatagcttattc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgcttattcattcattcattgaacgacaattgagtttttccagattagggctattacaaacaaagttcctatgcattttagtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagataaacactaaagattgtgatttctatgtcatgtgataaagatatggttaactttacaaaagactgccaaactgcttttcagaataaatgtatcgatttacattcccactaccaatgcaggagagatccagttgttccacatatttatcagcacttgatattgtcagcatggttttacttttcccattctagtaagtgtatagcg--------gcatgttattgtagctttactttgcttttctctaatagctaatgatattgcatcAAAAACCTTTTAAACCTTTAAAAATGATATTATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATGTAACGAGATGTCCAGGAATGAAagactaaggaacaactgagagtagggacacaagtcaggatgttcagctataggccagagaatagatgaagtttgcctgaagtaaagt----attgacaaaaggcaaggagacg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585972 806 + 86207423 cttcctcatacca-taacccctaataacc-actgatgttttctccgtcactacat-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttagc-------ctc--aatatatattcaagttattgtgtctattaatagcttattc--tttttcatttctgaatagtattctgtcgttatgatgtaccacagtttgtttattcattcattcattgaaggacaattgagtttttccagattagggctattacaaattaagttcctatgcattttagtgttctggtt-ttttgtgaatgt-aagtttccatttctctgagataaacactaaagattgtgatttctatgtcatgtgataaagatatggttaactttataaaagactgccaaagtgtttttcagaatatatgtatcgatttacattcccaccaccaatgcaggagaaatccagttgttccacatatttaccagcactctatattgtcagcatggttttacttttcccattctagtaagtgtatagtg--------gcatgttattgtagctttactttgcttttctctaatggctaatgatattgcatcAAAAACCTTTCAAACCTTTAAAAATGATATGATGATATAATGGGTAGGTAACTTCGGGAACTATGTAGAGAATTTAATGAGATGTCCAGGAATGAAAGATTCAGGAACAACtgagagtagggacacaagtcaggatgttcagctataggccagagaatagataaagtttgcctgaagtaaagt----attgacaaaaggcaaggagacg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066940 804 + 204787373 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaacctttagagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagcttgttc--tttttcatttctgagtagtattctgttgtaatgatgaa--acagtttgtttattcattcattcactgaaggacagttggatttttccagattaaggctatcacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagtaagagagatccagttgttccacatatttaccagcacttgatattgtcggcatggttttacttttcccattctagtaagtatatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgcatcACAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatgttcagctataggccagagaatagataaagtttgcctgaagtaaagt----atagacaaaaggcaaagagacg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998789 806 - 192460366 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagcttgttc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgtttattcattcattcactgaaggacagttggatttttccagattaaggctattacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagtaagagagatccagttgttccacatatttaccagcacttgatattgtcggcatggttttacttttcccattctagtaagtatatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgcatcACAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatgttcagctataggccagagaatagataaagtttgcctgaagtaaagt----atagacaaaaggcaaagagacg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110755 804 - 17224310 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagcttgttc--tttttcatttctgagtagtattctgctgtaatgatgag--acagtttgtttattcattcattcactaaaggacagttggatttttccagattaaggctattacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagcaagagagatccagttgttccacatatttaccagcacttgatattgtcggcatggttttacttttcccattctagtaagtatatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgcatcACAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatgttcagctataggccagagaatagataaagtttgcctgaagtaaagt----atagactaaaggcaaggagacg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422936 806 - 41321030 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagcttgttc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgtttattcattcattcactgaaggacagttggatttttccagattaaggctattacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaatactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagcaagagagatccagttgttccacatatttaccagcacttgatattgtcagcatggttttacttttcccattctagtaagtatatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgTATCAAAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatggtcagctataggccagagaatagataaagtttgcctgaagtaaagt----atagacaaaaggcaaggagacg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64494414 806 - 101219884 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttagactttcatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagtttgttc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgtttattcattcattcactgaaggacagttggatttttccagattaaggctattacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagcaagagagatccagttgttccacatatttaccagcacttgatattgtcagcatggttttacttttcccattctagtaagtgtatagtg--------gcacgttattgtagctttattttgcttttctctaatggctaatgatattgcatcAAAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatattcaactataggccagagactagataaagtttgcctgaagtaaagt----atagacaaaaggcaaggagacg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 880380 806 - 924385 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagcttgttc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgtttattcattcattcactgaaggacagttggatttttccagattaaggctattacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagcaagagagatccagtttttccacatatttaccagcacttgatattgtcagcatggttttacttttcccattctagtaagtatatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgcatcAAAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatggtcagctataggccagagaatagataaagtttgcctgaagtaaagt----atagacaaaaggcaaggagacg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6721373 803 - 10587913 cttcctcatacca-taatccttaataacctactgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaagcttttgagat--------aggt-ttttttccca------cttggc-------ctc--aatatacattcaagttattgtgtctattaataccttgttc--tttttcatttctgagtagtattctgttgtaatgatgtaccgca----gtttatttattcattcacggaaggacagttcggttttttcagattagggctgttacaaataaagtttctatgcatttctgtattctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctctgtcatgtgataaagatgtggttaactttataaaagactgccaaactgatttttagaataaatgtatcgatttacattcccaccaccaaagcaggagagatccagttgttccacatatttaccagcacttgatattgtcagcatggttttacttttcccattctagtaagtgtatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgcatcAAAAACTTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAgggaacaactgagagtagggatgcaagtcagaatgttcagctataagacagagaatagataaagtttgcctgaagtaaagt----atagacaaaaggcaaggagatg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056508 789 - 98464013 cttcctcatacta-taacccctaataaaa-actgatctgttctccatcactacac-ttaatcatatttagggttttatataaatagactcatacagtaagtaacctattgagat--------aggc-ttttttaccc------cttggca---------------------caagttattgtgtctattaatagtttgttc-ttttttcatttctgagtagtattctgctgtaatgatgtaccacagtttgtttattcattcatttattgaaggccagttgggtttttccagattggggctattacaaatacagttcctaagcattttagtgttctgtttattgcatgaatat-aagtttccatttttctgagataaacattcaaggttgttgtttctgtg-tatgtgataaagatatcattaaccttataaaagactgccaagatgtttttcagaataaatgtatcgatttacattcccactaccaatgcaggagagatccagttgttccacatacttaccagcacttgatattgtcagcatggttttacttttgccattcttgttagtgtatactt--------gcatgttattgtagctttacttcacttttctctaatggc----taTATTGCATCAAAAACTGTTT--ACCTATAAAAATGATGTAATGATATAATGGGTAGGTAACTCTGGGAATTATGTAGAGAATTGAATGAGATGTCCAGGGATAGAAGATTAAGGAACAACTGAGAATAGGGATACAAGTCAGGATGTTCAGATATAGGCCAGAGAATA----AAGTTTAGCTGAAATAAAGTATTGATTGACAAAGGGCAAGGAGACG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728098 807 + 27742158 cttcctcatacta-taacctctaataaca-actgatctgttctccatcgctatac-ttaaccatatttgagattttatataaatagactcatacagtaagtaatctattgagat--------aggc-tttttcaccc------cttggcat-atgcctc--aatatttattcaagttattgtgtctattaatagtttgttc-ttttttcatttctgagtagtattctgctgtaatgatgtaccacagtttgtttattcattcatttattgaaggccaattgggtttttctggattagggctattacaaataaagttcctaagcattttagtgttctgtttattgcat-aatgt-aagtttccatttgtctcagataaacactcaagattgttgtttgt----cacatgataaatatattgttaactttataaaagactgccaagatgtttttcagtataaatgtatcgatttacattcccactaccaatgcaggagagatccagttgttccgcatacttatcagcacttgatattgtcagcatggttttacttttgccattctagttagtgtatactt--------gcatgttattgtaactttacttcacttttctctaatggctaattatattgcatcAAAAACTGTTT--ACCTATCAAAATGATGTAATGATGTAATGGGTAGGTAACTCTGGGAATTATGTAGAGAATTGAATGAGATGTCCAGGGATGGAAGATTAAGGAACAACTGAGAATAGGGACACAAGTCAGGATGTTCAGTTATAGGCCAGAGAATA----AAGTTTACCTGAAATAAAGTATTGATTGACAAAGGGCAAGGAGACA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265527 798 - 4835464 CTTCCTTATACTA-TAACCCCTAATAA-----------------CATCACTACAC-TTAATCAcatttagggttttatataaatagactcatacagtaagtaacctattgagat--------aggc-ttttttaccc------cttggcataatgcctc--aatatatattcaagttatcgtgtctattagtagtttgtgctttttttcatttctgagtagtattctgctgtaatgatgtaccacagtttgtttattcattcatttattgaaggccaattgggtttttccagattagggctattacaaataaagttcctaggcattttagtgttctgtttattgcatgaatgt-aagtttccatttgtctgagataaacactcaagattgttgtttctgtgtcatgtgataaagatatcgttaatcttataaaagactgccaagatgtttttcagaataaatgtatctatttacattcccactaccaatgcaggagagatccagttgttccacatacttaccagcacttgatattgttaccatggttttacttttgccatattagttagcgtatactt--------gcatgttattgtagctttacttcatttttctctaatggctaattatattgcatcGAAAACTGTTT--ACCTATAAAAatgatgtaatgatgtaatggataggtaactctgggaattctgtagagaattgaatgagatatccagggatggaagattaaggaacaattgagaatagggacacaagtcaggatgttcagttataggccagagaata----aagtttacctgaagtaaagtactgattgacaaagggcaaggagacg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3724439 809 + 4093027 cttcctcatacta-taacgcctaataaca-actgatctgttctccatcactacac-ttaatcatatctagagttttatataaatagacttatacagtaagtaacctattgagat--------aggc-ttttttaccc------cttggcaaaatgcctcaaaatatatattctagttattgtgtctattaatagtttgttc-ttttttcatttctgagtagtattctgctgtaataatataccacagtttgtttattcattcatttattgaaggccaattgggtttttccagattagggctattacaaataaagttcctaagcattttagtgttctgtttattgcatgaatgt-aagtttccatttgtctgagataaacactcaagattcttgtttctgtgtcatgtgataaagatatcgttaaccttataaaagactgccaagatgtttttcagaataaatatatcgatttacattcccactaccaatgcaggagagatccagttgttccacgtacttaccagcacttgatattgtcagcatggttttacttttgccattctagttagtgtatactt--------gcatgttat------tttacttcacttttctctaatggctaactatattgcatcAAAAACTGTTT--ACCTATAAAAATGATGTAATGATATAATGGGTAGGTAactctgggaattatgtagagaattgaatgagatgtccagggatggaagattaaggaacaactgagaatagggatacaagtcaggatgttcagatataggccagagaata----aagtttacctgaaataaagtattgattgacaaagggcagggagacg i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45775436 781 - 149736546 ccccccccaacca-cagtccc-agcaacc-acccttctattct-tatcaccacaagtttgctatactgagactgtcaca-gagtggaatcatatgttaaatagacttgttagattaaaggtaaggt-atatttaacataaaattttggc-------ttc----------ttcta--tgttgtatattttagcagtttattc--tctttgatgcccacatagtattatattgtagtgatg-----------gttcactt-----ttcaatgaaagacagttctgtagttctggcttagagctattacaaatagagctttaaagatatt---tgtccatgtt-tttcacaaaaacaaaagatatagttctctgagataaatactcaggaacttgattgttatgcaattcaataaccagatggctaaatttataaaactatggcaaactattttcaataacatattcctc-atttatattctatttatcaaaataagagtggtgcgattgtcccacccccttgccatcacttggtattgtcaa-agaattctcattttCTCTCTGTAGTAACTGAATGCTGCAGTATCAGCATGCTACTCTTACTTTAATTT-CATTTCTGAAATGGGTAATGATCCTGCACTGAAAATCTTTC-TGTCTATGATTATGGTGTCATGATACAATGAGCAGGT-ACCAAGGGACTTATGCAAAAGTTAAAATGAAATGCATAGAGATAGAAGGCTAAGATAAAATTGAGTTGATGG---CAAATAA--ACTGTTAGATACCTTCAAAGTCTTAAATAGAGATTATTGAAAATATAAC----ACCAACAAAAGGTAA------- i mm10.chr6 I 1335 C 0 s canFam3.chr20 16603348 755 + 58134056 cctcacaaaaccattaatatctagcaatc-actgatcagttctccatcactacag-ttt-tcattttgaaactt--atataaatgga--catataggaagtaagcttttgagac--------tggctttttttttca------cttagc-------ata-------atgcctaagtcatagtgtgtatcagtag----ttc--ctttttattgttaagaagtattctgttgtcatgatgtgacaca----gtttacctattcacccactgaatgcaaattctgttgtttcagtttggggctg---------------ctatgaatttttgtgtacaggtttttgcgtgaatgt-aagttt-tatttcttt-agataaatacccaagggtataactgct-tgtcat-tggtcaatgtattattaactttgtagaagactgccaaactatttttcagaatggatgtgtcagcttacattcccaccagcaacacagaggagattccactgtttcacatccttgccagcacttggtattgccagtatg-------tctttccattctaataaatgtgtagca--------gtatgttattgtgggtttaatttgcatttccctaatagctagtgaGCTTGCATTGGAAGCCTTT----------AATGTGATGTCACAATATAAAGGAAAAGTAACTTGGGGAACTATGTAGATAATAGAATGAAATATCCAGGGATGTAAGGTTAAGGAAGAACAGAGGATGGGGAGATAAGTCAGGATGATCAGATATAGTCCAGGTAAAAGATAAAAGTTACCGAAAAGAAAGC----ATTTACTAAGGGCAAAGAGAgg i canFam3.chr20 C 0 I 190 s dasNov3.JH563077 1848114 766 - 2187301 ctctccccaacca-tagcccctattaacc-agaggtctggtctccatcactataaatttgccactttgaagattttgtttaaatggaatcataccctaagtaaacacttgagat--------tgac-ttttt---cc------tatagcataatgcctt--gagatctagccacatcattgtacatacaaatcatttgttc--cttttcattgctgaata----tgttgtgtgtggatagactata--------atttatttgcccactaaaagacatttaggttttcccag----------ttacagataaaactgctatgaacatttgtgtacaggtttttatgtgaacct-aagttttcatttctctgagaaaaacacccaag--tgtgattagtgggtcat---ttaaacatacacgta--tgtgtaaaacaccgcctaaagattttacagagta----taccaatttgcattccaatga-caatctaggtaagatcccgttggaccacatccttgtcagcacttggtattgtcagtgttttttttttcttcccattttaataaatatctagta--------ttatctcatttgctttttaaatttgttttttc------ctaatgATATTGTGGGGGAAACCTTTT-AATCTATAAACATGACATCAGGAAATAATGGGAATGTAACTCTGGGAATTATAGAGAGGAAAGAATGGAACATACAAAGATGGAAGGCTAACGAACAACtgaaggtagggagataaatcagtatattctgatacagtgtagataacagataatgtttacagaaaatagagt----attgacaaaagaaaagg----- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379863 1388 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57729338 1379 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234102 1386 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=452035.000000 s hg38.chrUn_KI270749v1 112588 41 + 158759 agaggagaggttggatttgagaagcatttggaagtcgattc s panTro5.chr3 201999802 41 - 202621043 agaggagaggttggatttgagaagcatttggaagtcgattc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767839 41 - 205426864 agaggagaggtcggatttgagaagcatttggaagtcgattc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67586778 41 + 86207423 agaggagaggttagatttgagaagcatttggaagttgattc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66067744 41 + 204787373 agaggagaggttggatttgagaagaatttggaagtcgattc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60999595 41 - 192460366 agaggagaggttggatttgagaagaatttggaagtcgattc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111559 41 - 17224310 agaggagaggttggatttgagaagaatttggaagtcgattc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17423742 41 - 41321030 agaggagaggtcggatttgagaagaatttggaagtcgattc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495220 41 - 101219884 agaggagaggttggatttgagaagaatttggaagtcgattc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881186 41 - 924385 agaggagaggttggatttgagaagaatttggaagtcgattc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722176 41 - 10587913 agaggagaggttggatttgagaagcatttggaagtcaattc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057297 41 - 98464013 AGAGGAGAGTTTGGATTTGAGAGGCATTTGGAAGTCAATTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728905 41 + 27742158 AAAGGAAAGTTTGGATTTGAGAAGCATTTGGAAGTCAATTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266325 41 - 4835464 agaggagagtttggatttgagaagcatttggaagtcaattt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725248 41 + 4093027 agaggagagtttggatttgagaagcatttggaagtcaattt i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45776217 35 - 149736546 --AGGAGA---CAGATTTGATAAGCA-TTGAAAGTAGGGTC i mm10.chr6 C 0 C 0 s canFam3.chr20 16604293 41 + 58134056 AGAGAAGAGATAAGATTTGAGAAGTATTTGAAAGTAGACTC i canFam3.chr20 I 190 C 0 s dasNov3.JH563077 1848880 41 - 2187301 ataaaggaggtcagatttgaaaagcatttaaaagtagagtc i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1379863 1388 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57729338 1379 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1234102 1386 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=15010.000000 s hg38.chrUn_KI270749v1 112629 1 + 158759 a s panTro5.chr3 201999843 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767880 1 - 205426864 a i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67586819 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66067785 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60999636 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111600 1 - 17224310 a i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17423783 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495261 1 - 101219884 a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881227 1 - 924385 a i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57730717 1 + 181502896 a i nasLar1.chr2 I 1379 I 1551 s colAng1.NW_012114711v1 6722217 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1381251 1 - 1467263 a i rhiRox1.KN296641v1 I 1388 I 1553 s rhiBie1.NW_016820128v1 1235488 1 - 2311269 a i rhiBie1.NW_016820128v1 I 1386 I 1551 s calJac3.chr15 46057338 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728946 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266366 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725289 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45776252 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16604334 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1848921 1 - 2187301 a i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e papAnu3.chr2 59557863 3221 + 187378091 I e ponAbe2.chr3 69655518 1487 + 202140232 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=13923.000000 s hg38.chrUn_KI270749v1 112630 1 + 158759 a s panTro5.chr3 201999844 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767881 1 - 205426864 a i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67586820 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66067786 1 + 204787373 a i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60999637 1 - 192460366 a i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11111601 1 - 17224310 a i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17423784 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64495262 1 - 101219884 a i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 881228 1 - 924385 a i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6722218 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057339 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728947 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266367 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725290 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45776253 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16604335 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1848922 1 - 2187301 a i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=6006.000000 s hg38.chrUn_KI270749v1 112631 1 + 158759 a s panTro5.chr3 201999845 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767882 1 - 205426864 a i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67586821 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s colAng1.NW_012114711v1 6722219 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057340 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728948 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266368 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725291 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45776254 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16604336 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1848923 1 - 2187301 a i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I e manLeu1.NW_012098965v1 881229 1 - 924385 I e macNem1.NW_012018021v1 11111602 1 - 17224310 I e rheMac8.chr2 66067787 1 + 204787373 I e chlSab2.chr22 64495263 1 - 101219884 I e cerAty1.NW_012009469v1 17423785 1 - 41321030 I e macFas5.chr2 60999638 1 - 192460366 I a score=31896.000000 s hg38.chrUn_KI270749v1 112632 3 + 158759 agg s panTro5.chr3 201999846 3 - 202621043 agg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767883 3 - 205426864 agg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67586822 3 + 86207423 agg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66067788 3 + 204787373 agg i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60999639 3 - 192460366 agg i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11111603 3 - 17224310 agg i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17423786 3 - 41321030 agg i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64495264 3 - 101219884 agg i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 881230 3 - 924385 agg i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6722220 3 - 10587913 aag i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057341 3 - 98464013 AGG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728949 3 + 27742158 AGG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266369 3 - 4835464 agg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725292 3 + 4093027 agg i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45776255 2 - 149736546 -TG i mm10.chr6 C 0 I 1 s canFam3.chr20 16604337 3 + 58134056 AAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1848924 3 - 2187301 atg i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69655518 1487 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=15561.000000 s hg38.chrUn_KI270749v1 112635 1 + 158759 a s panTro5.chr3 201999849 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767886 1 - 205426864 a i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69657005 1 + 202140232 a i ponAbe2.chr3 I 1487 I 1523 s nomLeu3.chr21 67586825 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66067791 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60999642 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111606 1 - 17224310 a i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17423789 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495267 1 - 101219884 a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881233 1 - 924385 a i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722223 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057344 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728952 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266372 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725295 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45776258 1 - 149736546 A i mm10.chr6 I 1 C 0 s canFam3.chr20 16604340 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1848927 1 - 2187301 a i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=709940.000000 s hg38.chrUn_KI270749v1 112636 91 + 158759 tttaatgaacagtttattgtgggaatgaaaaaaggaagttgtccatgtcaattcttaggttttaagcttcaaaaaa-gtatgtagataatgg s panTro5.chr3 201999850 91 - 202621043 tttaatgaacagtttattgtgggaatgaaaaaaggaagttgtccatgtcagttcttaggttttaagcttcaaaaaa-gtatgtagataatgg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767887 91 - 205426864 tttaatgaacagtttattgtgggaatgaaaaaaggaagttgtccatgtcagttcttaggttttaagcttcaaaaaa-gtatgtagataatgg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67586826 90 + 86207423 tttaatgaacagtttattgtgggaatgaaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atgg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66067792 90 + 204787373 tttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60999643 90 - 192460366 tttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111607 90 - 17224310 tttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17423790 90 - 41321030 tttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495268 90 - 101219884 tttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atga i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881234 90 - 924385 tttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagtttcaaaaaa-gtatgtagat-atga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722224 90 - 10587913 tttaatgaagaatttattgtgggaataagaaaaggaagttgtcaatggcaattcttaaggtataagcttcaaaaaa-gtatgtagat-atgg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057345 89 - 98464013 TTTCATAATCAGTTTATTGTGAGAATGTAAAAA-GAAGTTTTCAATAGTAATTCTTAGGGTTTAAGCTTCAAAAGA-GCATGTAGAT-ATGG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728953 88 + 27742158 TTTCATGATCAGTTTATTGTGGGAATGAAAAAA-GGAGTTTTCATTGGTAATTCTTAGGGTTTAAACTTCAAAAGA-GCATGTAGAT-AT-G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266373 89 - 4835464 tttcttgatcagtttattgtgggaatgaaaaaa-gaagttgtcagtggtaattcttagggtttaagcttcaaaaga-gcatgtagat-atgg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725296 89 + 4093027 tttcatgatcagtttattgtgggaatgaaaaaa-gaaattgtcaatagtaattcttagggtttaagcttcaaaaaa-gcatgtagat-atgg i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45776259 78 - 149736546 TGTGCTAAACAATTAATTACATCAGTAATCAAAGGGAAGAATCAGTG---AGCCAAAGGTGAGAAACTTGAATTAA-A----------ATAC i mm10.chr6 C 0 C 0 s canFam3.chr20 16604341 66 + 58134056 ---------------TTTGTGGGAATGAGTAACAGAAACAGTCAATGGTAACTC----GTTTTAAGCTGGAAATA------GTGGAT-ACAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1848928 75 - 2187301 cttgataaccaattcattgtgagaatgtaaaaA-----------CCAGTAATTCTGAAGTTTTTCTCTTAAAAGGATACATACTGA------ i dasNov3.JH563077 C 0 I 437 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=1424313.000000 s hg38.chrUn_KI270749v1 112727 157 + 158759 ctatagtaatcaaaattaagaataatagagggaa--atagttt-gaag----agaggaaatgat----aga----tatttttggccatattaaaactgaggtatctacaggacttaccaaAATATCTAAC----TCAGTAGG-AAAAATATTATTCAGAAAGGACATTTGGTTT-ATG s panTro5.chr3 201999941 157 - 202621043 ctatagtaatcaaaattaagaataacagagggaa--atagttt-gaag----agaggaaatgat----aga----tatttttggccatattaaaattgaggtatctacaggacataccaaAATATCTAAC----TGAGTAGG-AAAAATATTATTCAGAAAGGACATTTGGTTT-ATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767978 157 - 205426864 ctatagtaatcaaaattaagaataacagagggaa--atagttt-gaag----agaggaaatgat----aga----tatttttggccatattaaaattgaggtatctacaggacataccaaAATATCTACC----TGAGTAGG-AAAAATATTATTCAGACGGGACATTTGGTGT-ATG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67586916 157 + 86207423 ctatagtaatcaaaattaagaataatagagggaa--atagttt-gaag----agaggaaatgat----aga----tatttttggccatattaaaattgaggtatccacaggacataccaaAATATCTAAC----TGAGTAGG-AAAAATATTATTCAGAAAGGACATTTGGTTC-ATG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66067882 162 + 204787373 ctatagcaatcaaaattaagaataatagaggaaa--atggttt-ggag----aggggaaatgat----agagaggtatttttggccatattaaaattgaggtatctaaagaacataccaaaatatctgat----tgagtagg-AAAAATATTATTCAAAAAGGACATTTGGTTTCATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60999733 162 - 192460366 ctatagcaatcaaaattaagaataatagaggaaa--atggttt-ggag----agaggaaatgat----agagaggtatttttggccatattaaaattgaggtatctaaagaacataccaaaatatctgat----tgagtagg-AAAAATATTATTCAAAAAGGACATTTGGTTTCATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111697 162 - 17224310 ctatagcaatcaaaattaagaataatagaggaaa--atggttt-ggag----agaggaaatgat----agagaggtatttttggccatattaaaattgaggtatctaaagaacataccaaaatatctgat----tgagtagg-AAAAATATTATTCAAAAAGGACCTTTGGTTTCATG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17423880 162 - 41321030 ctatagcaatcaaaattaagaataatagaggaaa--attgttt-ggag----agaggaaatgat----agagaggtatttttggccatattaaaattgaggtatctaaagaacataccaaaatatctgat----tgagtagg-AAAAATATTATTCAAAAAGGACATTTGGTTTCATG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495358 162 - 101219884 ctatagcaatcaaaattaagaataatagaggaaa--atggttt-ggag----agaggaaatgat----agagaggtatttttggccatattaaaattgcggtatctaaagaacataccaaAATATCTAAT----TGAGTAGG-AAAAATATTATTCAAAAAGGACATTTGGTTTCATG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881324 162 - 924385 ctatagcaatcaaaattaagaataatagaggaaa--atggttt-ggag----agaggaaatgat----agagaggtatttttggccatattaaaattgaggtatctaaagaacataccaaaatatctgat----tgagtagg-AAAAATATTATTCAAAAAGGACATTTGGTTTCATG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722314 162 - 10587913 ctatagtaatcaaaattaagaataatagaggaaa--atagttt-ggag----agaggagatgat----agagaggtatttttgaccatattaaaactgaggtatctaaagaacataccaaACTATCTAAC----TGAGTAGG-AAAAATATTATTCAAAAAGGACATTTGGTTTAATG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057434 160 - 98464013 ATATAGCAATCAAAATTTAAAATAATAGAGAAAAAAACTGTTT-GGAG----AGAGGAAATGAT----AGA----TATTTTTGGCTATACTAAAATTGAGGTATCTACAGGACATATCAAAATACCTAAC----TGAGTAGGAAAAAATATTATTCAAAAA-GACATTTGGTATGATG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729041 159 + 27742158 ATATAGCAATCGAAATTAGAAATAATAGAGAAAAAGACCATTT-GGAG----AGAGGAAATGAT----AGA----TATTTTTGGCTATATTAAAATTGAGGTATCTACAGGACATACTAAAATACCTAAC----CCTGTAGG-AAAAATATTATTCAAAAA-CACATTTGGTATAACG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266462 163 - 4835464 atatagcaatcaaaattaaaaataatagagaaaaaaacagttt-ggag----tcaggaaatgatagagaga----tatttttggctatattaaaattgaggtatctacaggacatACTAAAATACCTAAC----CTTGTCGG-AAAAATATTATTCAAAAA-GACATTTGGTATGATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725385 159 + 4093027 atatagcaatcaaaattaaaaataatagagaaaaaaacagttt-ggag----agaggaaatgat----aga----gatttttggctatattaaaattgaggtatctacaggacataccaaAATACCTAAC----TGAGTAGG-AAAAATATTATTCAAAAA-GACATTTGGCATGATG i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45776337 119 - 149736546 ATACAGTA---GAGATCTTGGACAGAAAAAGGCA-------TT-GGAAATATATAAGGAACAAT----AAA-------CTCTGTCT-------AACTCAGG------------------------CTAAT----TATATGGA-GAGAATAGCACTTAAAATAAGCACCTGCTTC-ATA i mm10.chr6 C 0 C 0 s canFam3.chr20 16604407 164 + 58134056 ATATAGTAA-CAAAATTAAAAATAATGGAGGGAA-AACAGTTTGGGAA----AGAGAGAGATTT----GGAGAGACTTTTTTGGCCATATTGAAATTGAGGTATCTATAGAGGATACCAAAATATTTGGC----TGAGTGGGGAGAAACATTACTCCAAATGAACATTTGGTGTCACC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1849440 165 - 2187301 CTGCAATGACCAAAACTCAGAAAAATAGAGGAGA-AACAGTTT-AGAG----GGGAAAAAGTTT----GAA---ATATATTTGGTCATATTAAAATTGAGGTACCTGTAGGGTGTACCAAAATATCCAACAAAATGAGTGGGGAGAAATATCATTCAAAATGTATATTTGGTATCATA i dasNov3.JH563077 I 437 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 604164 2918 + 2414909 T e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=67333.000000 s hg38.chrUn_KI270749v1 112884 6 + 158759 AAGAAT s panTro5.chr3 202000098 6 - 202621043 AAGAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768135 6 - 205426864 AAGAAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587073 6 + 86207423 AAGAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068044 6 + 204787373 AAGAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60999895 6 - 192460366 AAGAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111859 6 - 17224310 AAGAAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424042 6 - 41321030 AAGAAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495520 6 - 101219884 AAGAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881486 6 - 924385 AAGAAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722476 6 - 10587913 AGGAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057594 6 - 98464013 AAGAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729200 6 + 27742158 AAGAAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266625 6 - 4835464 AAGAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725544 6 + 4093027 AAGAAC i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 601246 6 + 2414909 AAGAAT i proCoq1.NW_012148064v1 T 2918 C 0 s mm10.chr6 45776456 6 - 149736546 AAGAAC i mm10.chr6 C 0 C 0 s canFam3.chr20 16604571 6 + 58134056 AAGAGC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1849605 2 - 2187301 ---AA- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e micMur3.chr32 1618538 1332 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=1270018.000000 s hg38.chrUn_KI270749v1 112890 106 + 158759 AAAGACCTATTGGATTAAGTGGAATGTTTTACTTAAAAGTAGTTTTCTACTCTTTTCAGGAATATTATTGGCAATTAATCTTTGA-CCTCTAAGCCAGTTCACATTA s panTro5.chr3 202000104 106 - 202621043 AAAGACCTATTGGATTAAGTGGAATGTTTTACTTAGAAGTAGTTCCCTACTCTTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTCTAAGCCAGTTCACATTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768141 105 - 205426864 GAAGACCTATTGGATTAAGTGGAGTGTTTTACCCACAAGTAG-CCCCTACTCTTTCCAGGAATACTATTGGCAATTAATCTCTGA-CCTCTAAGCCAGTTCACATTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587079 106 + 86207423 AAAGACCTATTGGATTAAGTGGAATGTTTTACTTAAAATTAGTTTCCTACTCTTCTCAGGAATATTATTGGCAATTAATCTCTGA-CCTCTAAGCCAGTTCACATTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068050 106 + 204787373 AAAGACCTATTGAATTAAGTGGAAAGTTTTACTTAAAATTAGTTTCCTAGCCCTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60999901 106 - 192460366 AAAGACCTATTGAATTAAGTGGAAAGTTTTACTTAAAATTAGTTTCCTAGCCCTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111865 106 - 17224310 AAAGACCTACTGAATTAAGTGGAAAGTTTTACTTAAAATTAGTTTCCTAGTCCTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424048 106 - 41321030 AAAGACCTATTGAATTAAGCGGAAAGTTTTACTTAAAATTAGTTTCCTAGCCTTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495526 106 - 101219884 AAAGACCTACTGGATTAAGTGGAAAGTTTTACTTAAAACTAGTTTCCTAGCCTTTTCAGGAATATTAATGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881492 106 - 924385 AAAGACCTATTGAATTAAGCGGAAAGTTTTACTTAAAATTAGTTTCCTAGCCTTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722482 106 - 10587913 AAAGACCTATTGGATTAAGTGGAAAGTTTTACTTAAAATTAATTTCCTAGCATTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTCTAAGCCAGCTCACACTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057600 105 - 98464013 AAAGACTTATTGGATTAGGTGGAATG-TTTACTTGAAATTATTTTTTTAGCCTTTTCAGGAATATTATTGGCAATTAATATCTGA-CCTCTAAGCCAGTTCACATTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729206 105 + 27742158 GAAGACCTATTGGATTCCGTGGAATG-TTTACTTGAAATTATTTTCTTAGCCTTTTCAGGAATATTATTGGCAATTAATATCTGA-CCTCTAAGCCAGTTCACATTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266631 105 - 4835464 AAAGACCTATTGGATTAGGTAGAATG-TTTACTTGAAATTATTTTCTTAGCCTTTTCAGGAATATTATTGGCAATTAATATCTGA-CCTCTAAGTCAGTTCACATTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725550 105 + 4093027 AAAGACTTATTGGATTAGGTGGAATG-TTTACTTGAAATTATTTTCTTAGCCTTTTCAGGAATATTATTGGCAATTAATATCTGA-CCTCTAAGCCAGTTCACATTA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1619870 105 - 9149476 AAAGACCTATTGGATTAAGTGGAGTATTTTGCTTAAAATTATTTTCTTAGAATTTTTAGGAACATTGATGG-AATTAATCTCTGA-CCTCTATACTAGTTCACATTA i micMur3.chr32 I 1332 C 0 s proCoq1.NW_012148064v1 601252 106 + 2414909 AAAGACCTATTCAGTTAAGTGGAATATTTTGCTTAAAATTATTTTCTTAGAATTTTTAGGAACATTGTTGGCAATTAATCTCTAA-CCTCTATACCAGTTCACATTA i proCoq1.NW_012148064v1 C 0 C 0 s mm10.chr6 45776462 101 - 149736546 AGAGAACTTGTGAATTAAATGGAACAATTTGCTTGTAAGTATTTT----GTCTTTTTTCAAAATTTGCTAGCAACTGACCTCTGA-TTTGCAAAAGACTT-ACATTG i mm10.chr6 C 0 C 0 s canFam3.chr20 16604577 101 + 58134056 AAAGACCCGTTGTAGTAAGTGGGATATTTTGCTTAAAATCACTGTCATAGCTTTTTTAGCGATACTGTTGGCAATTATTT------CTCTTAGACCAGTTCACACGG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1849607 105 - 2187301 -AAGACTT-TTGGACTAAGTGAAGAATTTTGTTTTAAATCATTTCCACAGTCCTTTTAGGAACACTGTTGGCAATTAATCTCTGACCCTTTAGACCAGCACACATTA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=146017.000000 s hg38.chrUn_KI270749v1 112996 10 + 158759 -AAAATAAGAC s panTro5.chr3 202000210 10 - 202621043 -AAAATAAGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768246 10 - 205426864 -AAAATAAGAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587185 10 + 86207423 -AAAATAAGAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068156 10 + 204787373 -AAAATAAGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000007 10 - 192460366 -AAAATAAGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111971 10 - 17224310 -AAAATAAGAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424154 10 - 41321030 -AAAATAAGAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495632 10 - 101219884 -AAAATAAGAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881598 10 - 924385 -AAAATAAGAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722588 10 - 10587913 -AAAATAAGAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057705 10 - 98464013 -AAATTAAGAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729311 10 + 27742158 -AAATTCAGAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266736 10 - 4835464 -AAATTCAGAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725655 10 + 4093027 -AAATTAAGAC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1619975 10 - 9149476 -AAAACAAGAC i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 601358 10 + 2414909 -AAAATAAGAC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11068940 10 + 30473821 -aaaaTAAGAC i otoGar3.GL873534 I 160 C 0 s mm10.chr6 45776563 10 - 149736546 -GAAGTAAGAG i mm10.chr6 C 0 I 162 s canFam3.chr20 16604678 10 + 58134056 -AAAGGAAGAC i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1849712 11 - 2187301 GAAACAAGGAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I a score=1823484.000000 s hg38.chrUn_KI270749v1 113006 148 + 158759 CACACCAAAAGACATTTTAGATTGAGAAACTAATGTGAACAATTCATG---------GGG-AGAAAATTGAAATATGGCAATAGTCTATTGTACAGCTGTCTTGAAGGGGAATTTGAAGGCCA-TAACTGTCGAAGGATTTTCCTAAC-TTACAGAAGCC s panTro5.chr3 202000220 148 - 202621043 CACGCCAAAAGACATTTTAGATTGAGAAACTAATGTGAACAATTCATG---------GGG-AGAAAATTGAAATATGGCAATAGTCTATTGTACAGCTGTCTTGAAGGGGAATTTGAAGGCCA-TAACAGTGGAAGGATTTTCCTAAC-TTACAGAAGCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768256 148 - 205426864 CACGCCAAAAGGCATTTCAGGTTGAGAAACTAATGTGAACAATTCATG---------GGG-AGAAAATTGAAATACGGCAATAGTCTATTGTACAGCTGTCTTGAAGGGGAATTTGAAGGCCA-TAACTGTGGAAGGATTTTCCTAAC-TTACAGAAGCC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587195 148 + 86207423 CACACCAAAAGACATTTTAGGTTGAGAAACTAATGTGAATAATTCATG---------GGG-AGAAAATTGAAATATGGCAATAGCCTATTGTACAGCTGTCTTGAAGGGGAATTCGAAGGCCA-TAACTATCGAAGGATTTTCCTAAC-TTACAGAAGCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068166 148 + 204787373 CACACCAAAAGACATTTTTGGTTGAGAAACTCATGTGAATAGTTCATG---------GGG-AGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATCGAAAGATTTTCCTAAC-TTACAGAAGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000017 148 - 192460366 CACACCAAAAGACATTTTTGGTTGAGAAACTCATGTGAATAGTTCATG---------GGG-AGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATTGAAAGATTTTCCTAAC-TTACAGAAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111981 148 - 17224310 CACACCAAAAGACATTTTTGGTTGAGAAACTCATGTGAATAGTTCATG---------GGG-AGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATCGAAAGATTTTCCTAAC-TTACAGAAGCC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424164 148 - 41321030 CACACCAAAAGACATTTTTGGTTGAGAAACTAATGTGAATAGTTCATG---------AGG-AGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATCGAAAGATTTTCCTAAC-TTACAGAAGCC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495642 146 - 101219884 CACACCAAAAGACATTTTAGGTTGAGAAACTAATGTGAATAGTTCATG---------GGG-AGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATC--AAGATTTTCCTAAC-TTACAGAAGCC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881608 148 - 924385 CACACCAAAAGACATTTTTGGTTGAGAAACTAATGTGAATAGTTCATG---------AGG-AGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATCGAAAGATTTTCTCAAC-TTACAGAAGCC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722598 148 - 10587913 CACACCAAAAGACATTTTAGGTTGAGAAACTAATGTGAACAATTCATG---------GGG-GGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTGTTGAAGGGGAATTTAAAGGCCA-TAGCTATCGAAGGATTTTCCTAAC-TGACAGAAGCC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057715 149 - 98464013 CACACCAAAAGACATTTTAGGCTGAGAAACTAATGTGAATACTTGTTG---------GGG-AGAAAATTGAAATATGGCAATAGCCTATTATACACCCGTCTTAAAGGAAAATTTGAAGGCCAATAAGTATCCAAGGATTTTCCTCAC-TTACAGAAGCC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729321 148 + 27742158 CACACCAAAAGACGTTTTAGGTTGAGAAACT-TTGTGAATAATTGTTG---------GGG-AGACAATTGAAATATGACAATAGCCTATTATACACCTCTCTTGAAGGAGAATTTGAAGGCCAATAAGTATTGAAGGATTTTTCTCAC-TTGCAGAAGCC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266746 148 - 4835464 CGCACCAAAAGACGTTTTAGGTTGAGATACT-ATGTGAATAATTGTTG---------GGG-AGAAAATTGAAATATGACAATAGCCTATTATACACCTCTCCTGGAGGAGAAATTGAAGACCAATAAGTATTGAAAGATTTTTCTCAC-TTACAGAAGCC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725665 149 + 4093027 CACACCAAAAGACATTTTAGGTTTAGAAACTAATGTGAATAATTGTTG---------GGG-AGAAAATTGAAATATGACAATAGCCTATTATACACCTGTCTTGAAGAAGAATTTGAAGGCCAGTAAGTATCGAAGGATTTTCCTCAC-TTACAGAAGCC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1619985 149 - 9149476 CAAGTCAAAGGCCATTTTAGATTGAGGAACTAATATAAACAATTCTTG---------GAG-AGAAAACTGAAATATGGCAATAGCCTATTGTATAGCTATTTTGAAGGAGAATTAGTAGGCCAATAACTATTGCAGGGTTTTTCCAAT-TTACAGAAGCC i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 601368 149 + 2414909 CAAATCAAAGGCCATTTTAGGTTGAGGCACTGATGTGAACAATTCTTG---------GGG-AGAAAGCTGAAATATGGCAATAGCCTACTGTATAGCTATCTTGAAGGAGAATTAGCAGGCCAGTAACTATTGGAGGATTTTTCCAAT-TCGCAGAAGCC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11068950 150 + 30473821 CAAATCAAAGGACATTTTAGGTTGAAAGACTAAGATGAACACTTCTTG---------AAGAAAAAAACTGAAATATGGTGATAACCTACTATATAGCTATTTTGGGGGAGAATTAGAAAGCCAATAACAAGTGGAAAGTTTTTCCAAT-TTACAGAAGCC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16604690 141 + 58134056 AATCTCAAAATCCATTTT-GGTTTAGGAGGTGATATGAACCAATCTTA---------GGG-AGAAAATT--------ATAATAGCCTACTATATTGTTACTTTGAAGGGGAATTAGAAAGCCAATAATTAATGGAGAGTTTTCCCAAAGTTATAGAAGAC i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1849723 156 - 2187301 CAAGTCAAGGGCCATTTTAGACTGAAGAACTAATGTGAACAATTCTTGGGAGGTGGTGGG-GGAGAACTGTACTATGACAATATCCTATTGTGTAGCTCCCTTGAAGGGGAATTAGAAGTCTA-TAATTATTGGAGGGTTTT-CAGAT-TTACTTAATCC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e mm10.chr6 45776573 162 - 149736546 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I a score=1017421.000000 s hg38.chrUn_KI270749v1 113154 95 + 158759 TG-----TGTACACTACCA--GAAGAATTGATG------------------------TTTGCAATTCCACCC--ACTGTGTACTTTTTCATG-ATGAGAGAAATCATTCAGGACAACGCAGTTAGCAAA s panTro5.chr3 202000368 95 - 202621043 TG-----TGTACACTACCA--GAAGAATTGATG------------------------TTTGCAGTTCCACCC--ACTGTGTACTTTTTCATG-ATCAGAGAAATCATTCAGGACAACGCAGTTAGCAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768404 95 - 205426864 TG-----TGCACACTACCA--GAAGAATTGATG------------------------TGTGCAGTTCCACCC--ACTGTGTACTTTTTCATG-ATCAGAGAAATCATTCAGGACAACGCAGTTAGCAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587343 95 + 86207423 TG-----TGTACACTACCA--GAAGAATTGATG------------------------TTTGCAATTCCACCC--ACTGTGTACTTTTTCATT-ATCAGAGAAATCATTCAGGACAACGCAGTTAGCAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068314 95 + 204787373 TG-----TGTACACTACCA--GAAGAACTGATG------------------------TTTGCAATTCCACCC--ACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGCAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000165 95 - 192460366 TG-----TGTACACTACCA--GAAGAACTGATG------------------------TTTGCAATTCCACCC--ACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGCAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112129 95 - 17224310 TG-----TGTACACTACCA--GAAGAACTGATG------------------------TTTGCAATTCCACCC--ACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGCAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424312 95 - 41321030 TG-----TGTACACTACCA--GAAGAACTTATG------------------------TTTGCAATTCCACCC--ACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGCAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495788 95 - 101219884 TG-----TGTACACTACCA--GAAGAACTGATG------------------------TTTGCAATTCCACCC--ACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGCAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881756 95 - 924385 TG-----TGTACACTACCA--GAAGAACTTATG------------------------TTTGCAATTCCACCC--ACTGTGCACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGCAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722746 95 - 10587913 TG-----TGTACACTACCA--GAAGAACTGATG------------------------TTTGCAATTCCACCC--ACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGCAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057864 92 - 98464013 TG-----TGTACACTGCC-----TGAATTGATG------------------------TTGTCAATTCCATTC--ATTGTGTACTTTTTCTTG-ATCACAGAAATCATTCAGGACAATGTAGTTAGCAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729469 92 + 27742158 TG-----CGTACACTACC-----AGAATTGATG------------------------TTTGCAATTCCATTC--ACTGTGTACTTTTTCTTG-ATCACAGAAATCATTCAGGACAATGTAGTTAGCAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266894 92 - 4835464 TG-----TGTACACTACC-----AGAATTGATG------------------------CTTGCAATTCCATTT--ACTGTGTAGTTTTTCTTG-ATCACATAAATCATTCAGGACAATGTACTTAGCAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725814 90 + 4093027 TG-----TGTACACTACC-----AGAATTGATG------------------------TTTGCAATTCCATTC--AC--TGTACTTTTTCTTG-ATCACAGAAATCATTCAGGACAATGTAGTTAGCAAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1620134 98 - 9149476 TG-----GGTACTCTACCA--AAAGAATAGAAGA---------------------CATTTGCAATTCCACTC--ACTGTGCACATTTTCATG-ACCGGAGAAATCATTCAAGACACCACAATTAGCAAC i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 601517 98 + 2414909 TG-----AGTACTCTACCA--AAAGAAAAGAAGA---------------------CATTTGAAATTCCACTC--ACTGTGTACATTTTCACG-ATCAGAGAAATCATTCAAGACAACGCAATTAGCAAA i proCoq1.NW_012148064v1 C 0 I 13364 s otoGar3.GL873534 11069100 102 + 30473821 TGCCTATTCTACCCTACCA--AAGGAACAGAAGA---------------------CATTTTCAATTCTACCC--ACTGTGCTCATTTTCATG-ATTGGGGAAGTCATCTGAGAGAGC-TGATTAGCATA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45776735 120 - 149736546 TG-----TGCACAATACTAACAATGCACTGTTGAGTTTTGTGGGGTTTTTGTTTGTTTTTGTGTTTGTTTcccagttatttgctcctttattcattagggtattggttcacaagaagtcacctga---- i mm10.chr6 I 162 C 0 s canFam3.chr20 16604831 96 + 58134056 TG-----GGAACTCTATTA--AAAGAATAGATG---------------------ACGTTTGCATTTCCACTC--AC-ATGTTC-TTTTCATG-ATTAGAAGAATCATTTAAGACCACAAATTTAGCAAA i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1849879 92 - 2187301 TG-----GCTAATTTGTCA--AAAGAACCAAAG---------------------ACATTTGCAATTTCACCA--A--ATATACTTTTTCAAG-ATTGGAGaaataa--aaaaataat--aatttaCAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I a score=129087.000000 s hg38.chrUn_KI270749v1 113249 12 + 158759 CCATAACTCAAA s panTro5.chr3 202000463 12 - 202621043 CCATAACTCAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768499 12 - 205426864 CCATAACTCAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587438 12 + 86207423 TCATAACTCAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068409 12 + 204787373 TCATAACTCAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000260 12 - 192460366 TCATAACTCATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112224 12 - 17224310 TCATAACTCAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424407 12 - 41321030 TCATAACTCAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495883 12 - 101219884 TCATAACTCAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881851 12 - 924385 TCATAACTCAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722841 12 - 10587913 TCATAACTCAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057956 12 - 98464013 TCATATCTAGAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729561 12 + 27742158 TCATACCTAGAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266986 12 - 4835464 TCATATCTAGAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725904 12 + 4093027 TCATATCTAGAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1620232 12 - 9149476 TCATATCTCAAG i micMur3.chr32 C 0 I 16 s otoGar3.GL873534 11069202 12 + 30473821 TCACATCTCAAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45776855 10 - 149736546 gtatgactca-- i mm10.chr6 C 0 C 0 s canFam3.chr20 16604928 12 + 58134056 TCACACCTCAAA i canFam3.chr20 I 1 I 1 s dasNov3.JH563077 1849971 12 - 2187301 TCATATCTGAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I a score=16461.000000 s hg38.chrUn_KI270749v1 113261 12 + 158759 ATCGATAGAC-CC s panTro5.chr3 202000475 12 - 202621043 ATCGATAGAT-CC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768511 12 - 205426864 ATCGATAGAC-CC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587450 13 + 86207423 ATCGATAGCCGCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068421 9 + 204787373 GATGATA----CC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000272 9 - 192460366 GATGATA----CC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112236 9 - 17224310 GATGATA----CC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424419 9 - 41321030 GATGATA----CC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495895 9 - 101219884 GATCATA----CC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881863 9 - 924385 GCTGATA----CC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722853 9 - 10587913 GATGATA----CC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057968 12 - 98464013 AATGATAGCC-CC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729573 12 + 27742158 AATGATAGCC-CC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266998 12 - 4835464 AATGATAGCC-CC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725916 12 + 4093027 AACGATAGCC-CC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069214 12 + 30473821 AGCTATAGTC-CC i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16604941 7 + 58134056 GCTGTTG------ i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1849983 8 - 2187301 AACTATAG----- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45776865 0 - 149736546 C e micMur3.chr32 1620244 16 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 178414 2014 + 958716 I a score=-41074.000000 s hg38.chrUn_KI270749v1 113273 3 + 158759 CC---A s panTro5.chr3 202000487 3 - 202621043 CC---A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768523 6 - 205426864 CCCCGC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587463 3 + 86207423 CC---C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068430 3 + 204787373 CA---C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000281 3 - 192460366 CA---C i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112245 3 - 17224310 CA---C i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424428 3 - 41321030 CA---C i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495904 3 - 101219884 CA---C i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881872 3 - 924385 CA---C i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722862 3 - 10587913 CA---C i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057980 2 - 98464013 CG---- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729585 2 + 27742158 TG---- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267010 2 - 4835464 CA---- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725928 2 + 4093027 CA---- i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 180428 2 + 958716 TA---- i tarSyr2.KE939134v1 I 2014 I 744 s otoGar3.GL873534 11069227 1 + 30473821 C----- i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16604948 2 + 58134056 CT---- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1849991 2 - 2187301 TA---- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45776865 0 - 149736546 C e micMur3.chr32 1620244 16 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I a score=29964.000000 s hg38.chrUn_KI270749v1 113276 8 + 158759 CCCCCCGC--- s panTro5.chr3 202000490 8 - 202621043 CCCCCCGC--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768529 8 - 205426864 CCCCCCGC--- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587466 8 + 86207423 CACCCCGC--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068433 8 + 204787373 TTCCCTGC--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000284 8 - 192460366 TTCCCTGC--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112248 8 - 17224310 TTCCCTGC--- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424431 8 - 41321030 TTCCCTGC--- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495907 8 - 101219884 TTCCCTGC--- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881875 8 - 924385 TTCCCTGC--- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722865 8 - 10587913 TTCCCCGC--- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057982 4 - 98464013 ----CTGC--- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729587 4 + 27742158 ----CTGC--- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267012 4 - 4835464 ----CTGC--- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725930 4 + 4093027 ----CTGC--- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069228 4 + 30473821 ----CTGC--- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45776865 3 - 149736546 --ctc------ i mm10.chr6 C 0 C 0 s canFam3.chr20 16604950 8 + 58134056 ACCACAGC--- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1849993 8 - 2187301 ---CCCACTAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1620244 16 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I a score=389445.000000 s hg38.chrUn_KI270749v1 113284 38 + 158759 ATTTTTGTT---ATTTCATGATAAGATAATGGCAATATATA s panTro5.chr3 202000498 38 - 202621043 ATTTTTGTT---ATTTCATGATAAGATAATGGCAATATATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768537 38 - 205426864 ATTTTTGTT---ATTTCATGATAAGATAATGGCAATATATA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587474 38 + 86207423 ATTTTTGTT---ATTTCATGATAAGATAATGGCAATATATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068441 38 + 204787373 ATTTTTGTT---ATTTCATGATAAGATAATGGCAATATATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000292 38 - 192460366 ATTTTTGTT---ATTTCATGATAAGATAATGGCAATATATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112256 38 - 17224310 ATTTTTGTT---ATTTCATGATAAGATAATGGCAATATATG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424439 38 - 41321030 ATTTTTGTT---ATTTCATGATAAGATAATGGCAATATATG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495915 38 - 101219884 ATTTTTGTT---ATTTCATGATAAGATAATGGCAATATATG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881883 38 - 924385 ATTTTTGTT---ATTTCATGATAAGATAATGGCAATATACG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722873 38 - 10587913 ATTTTTGTT---ATTTCATGACAAGATAATGGCAATATATG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057986 38 - 98464013 ATTTTTGTT---GTTTTATGATAAGATAATGGCAATATATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729591 38 + 27742158 ATTTTTGTT---GTTTTATGATAAGATAATGGCAATATCTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267016 37 - 4835464 ATTTTTGTT---G-TGTATGATAAGATAATGGCAATATGTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725934 38 + 4093027 ATTTTTGTT---GTTTTATGATAAAGTAATGGCAATGTATA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1620260 38 - 9149476 ATTTTTGTC---TTTTCTTTATAAAATAATGACTATATATC i micMur3.chr32 I 16 C 0 s otoGar3.GL873534 11069232 38 + 30473821 ATTTTCATT---TTTTCAATATAAGATAATGACTACATATC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45776868 29 - 149736546 ---tttgttcacagtccctcctaggagagtgg--------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16604958 32 + 58134056 ------ATT---TTTTCAATGTAAGAAAATGATTTtatata i canFam3.chr20 C 0 I 196 s dasNov3.JH563077 1850001 29 - 2187301 ACTTCTATT---TCTTCATTAACAGATA-TGCT-------- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I a score=3470303.000000 s hg38.chrUn_KI270749v1 113322 336 + 158759 AAATAAGCAT---AATAC---TAATAGTATATA----------AACCAT--------AAAGTAAAATGTTTAACATATATTATTTTATTC---AA---CC-CTAAACATCCTCTATTATAACTTGGTGAGAAAA---GCAGTAACATCTCCATGTTAAATATT-AAAGAACCTTAA-AACTAGAATAAATGCAAAGAACATGACACGCGGTATGGATGACC--TTTTTTT---CTGA----AAATAGTTTAAATTCCTTTCCCCTATACCAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATCTAAGTACTGGTATATCTGCTTGAATCACAAACACATGATTATAAGGCAAATGTAATCCATATCTATGTTGT-- s panTro5.chr3 202000536 336 - 202621043 AAATAAGCAT---AATAC---TAATAGTATATA----------AACCAT--------AAAGTAAAATGTTTAACATATATTATTTTATTC---AA---CC-CTAAACATCCTCTATTATAACTTGGTGAGAAAA---GTAGTAACATCTCCATGTTAAATATT-AAAGAACCTTAA-AACTAGAATAAATGCAAAGAACATGACACGTGGTATGGATGACC--TTTTTTT---CTGA----AAATAGTTTAAATTCCTTTCCCCTATACCAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATCTAAGTACTGGTATATCTGCTTGCATCACAAACACATGATTATAAGGCAAATGTAATCCATATTTATGTTGT-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768575 336 - 205426864 AAATAAGCAT---AATAC---TAATAGTATATA----------AACCAT--------AAAGTAAAATGTTTAACATATATTATTTTATTC---AA---CC-CTAAACATCCTCTATTATAACTTGGTGAGAAAA---GTAGTAACATCTCCATGTTAAATATT-AAAGAACCTTAA-AACTAGAATAAATGCAAAGAACATGACACGCGGTATGGATGACC--TTTTTTT---CTGA----AAATAGTTTAAATTCCTTTCCCCTATACCAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATCTAAGTACTGGTATATCTGCTTGCATCACAAACACATGATTATAAGGCAAATGTAATCCATATTTATGTTGT-- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587512 338 + 86207423 AAATAAGTA------------TAATAGTATATA----------AACCATAAAGTAAAAAAGTAAAATGTTTAACATATATTATTTTATCC---AA---CC-CTAAATATCTTCTATTATAACTTGATGAGAAAA---GTAGTAACATCTCCATGTTAAATTCT-AAAGAACCTTCA-AACTAGAATAAATGCAAAGAACATGACACGCGGTATGGATGACC--TTTTTTT---CTGA----AAATAGCTTAAATTCCTTTCGCCTATACCAGTATTAGACTGAGAAATGGAGTCTCTCCTCAGAACCATCTAAGTACTGGTATATCTGCTTGAATCACAAACACATGATTATAAGGCAAATGTAATCCATATTTATGTTGT-- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068479 337 + 204787373 TAATAAGTAT---ATTAA---TAATAGTATATA----------AACCAT--------AAAGTAaaatgtttaacatacattattttatcc---aa---cc-ctaaacatcctctattataacctggtgagaaaa---gtagcaacatctccatgttaaatatt-aaagaaactTCA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGATC-TTTTTTTT---CTGA----AAATAGTTTAAATTCCTTTCCTCTATAAGAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATTTAAGTCCTGGTATATCTGCTTGAATCACAAACACATGAGTATAAGGTAAATGTAATCCATATTTACGTTCT-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000330 338 - 192460366 TAATAAGTAT---ATTAA---TAATAGTATATA----------AACCAT--------AAAGTAAAATGTTTAACATACATTATTTTATCC---AA---CC-CTAAACATCCTCTATTATAACCTGGTGAGAAAA---GTAGCAACATCTCCATGTTAAATATT-AAAGAAACTTCA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGATCTTTTTTTTT---CTGA----AAATAGTTTAAATTCCTTTCCTCTATAAGAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATTTAAGTCCTGGTATATCTGCTTGAATCACAAACACATGAGTATAAGGTAAATGTAATCCATATTTACGTTCT-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112294 338 - 17224310 TAATAAGTAT---ATTAA---TAATAGTATATA----------AACCAT--------AAAGTAaaatgtttaacatacattattttatcc---aa---cc-ctaaacatcctctattacaacctggtgagaaaa---gtagcaacatctccatgttaaatatt-aaagaaactTCA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGATCTTTTTTTTT---CTGA----AAATAGTTTAAATTCCTTTCCTCTATAAGAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATTTAAGTCCTGGTATATCTGCTTGAATCACAAACACATGAGTATAAGGTAAATGTAATCCATATTTACGTTCT-- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424477 336 - 41321030 TAATAAGTAT---ATTAA---TAATAGTATATA----------AACCAT--------AAAGTAaaatgtttaacatacattattttatcc---aa---cc-ctaaacatcctctattataacctggtgagaaaa---gtagcaacatctccatgttaaatatt-aaagaaactTTA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGATC--TTTTATT---CTGA----AAATAGTTTAAATTCCTTTCCTCTATACGAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATCTAAGTCCTGGTATATCTGCTTGAATCACAAACACATGAGTATAAGGCAAATGTAATCCATATTTACGTTCT-- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495953 336 - 101219884 AAATAAGTAT---ATTAA---TAATAGTATATA----------AACCAT--------AAAGTAAAATGTTTAACATACATTATTTTATCC---AA---CC-CTAAACATCCTCTATTATAACCTGGTGAGAAAA---GTAGCAACATCTCCATGTTAAATATT-AAAGAAACTTCA-AACTAGAATAAATGCAAAGAACATGACATGTGGTATGGATGATC--TTTTTTT---CTGA----AAATAGTTTAAATTCCTTTCCTCTATACGAGTATTAGACTGAGAAATGGAGTGTCTCCTGAGAACCATCTAAGTCCTGGTATATCTGCTTGAATCACAAACACACGAGTATAAGGCAAATGTAATCCATATTTATGTTGT-- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881921 335 - 924385 TAATAAGTAT---ATTAA---TAATAGTATATA----------AACCAT--------AAAGTAAAATGTTTAACATACATCATTTTATCC---AA----C-CTAAACATCCTCTATTATAACCTGGTGAGAAAA---GTAGCAACATCTCCATGTTAAATATT-AAAGAAACTTTA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGATC--TTTTATT---CTGA----AAATAGTTTAAATTCCTTTCCTCTATACGAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATCTAAGTCCTGGTATATCTGCTTGAGTCACAAACACATGAGTATAAGGCAAATGTAATCCATATTTACGTTCT-- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722911 336 - 10587913 AAATAAGCAT---ATTAA---TAATAGTATATA----------AACCAT--------AAAGTAAAATGTTTTACATACATTATTTTATCC---AA---CC-CTAAACATCCTCTATTATAACCTGGTGAGAAAA---GTAGCAACATCTCCATGTTAAATATT-AAAGAACCTTAA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGACC--TTTTTTT---CTGA----AAATAGTTTAAATTCTTTTCCTCTATACGGGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATGTAAGTCCTGGTATATCTACTTGAATCACAAACACATGAGTATAAGGCAAATGTAATCCGAGACTCCGTATC-- i colAng1.NW_012114711v1 C 0 I 3 s calJac3.chr15 46058024 335 - 98464013 AAATAAGCAT---AATACTAATAATAGTATACA----------AACCAT--------AAAGTAAAATCTTTAACATACATTATTTTATCT---AGTCCTC-CTAAACATCCTCTATTATAATTTGGTGAGAAAA---GT-------TCTTCATTCTAAATATT-AAAAAAACTTAA-AACCAGAATAAATGCAAAGAACATGATACATTGTATGGAAAGCC-ATTTTTTT---CTGA----AAATAGTTTAAATTTCTTTCCTTTATATGAGTATTAGACTGCAAAATGGAGTCTCTTTTGAGAACCATCTAAGTCCTGGTATATCTGCTTGACTC-CAAATACATGATTATAAGGTGAACATAATCCATATTTATGTTGT-- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729629 343 + 27742158 AAATAAGCAT---AATAC---TAATAGTATATA----------AACCAT--------TAAGTAAAATCTTTAACATACATTATTTTATCT---AATTCTC-CTAAACTTCCTCTAGTATAACTTGGTGAGAAGA---GTAATAACATCTTCATTCTAAATATTAAAAAAAACTTAA-AACCAGAATAAATGCAAAGAACATGACATATTGTATGGAAGGCC-ATTTTTTTTA-CTGA----AAATAGTTTAAATTCCTTTCCTCTATATGAGTATTAGACTGCAAAATGGAGTCTCTCTTGAGAACCATCTAAGTCCTGGTATATCTACTTGACTCACAAATACATGATTATAAGGCAAATGTAATCCATATTTATGTTGT-- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267053 341 - 4835464 AAATAAGCAT---AATAC---TAACAGTATATA----------AATCAT--------AAAGTAAAATCTTTAACATACATTATTTTATCA---AATCCTC-CTAAACATCCTCTAGTATAACTTGGTGAGAAAA---GTAATACCATCTTCATTCCAAATATT-AAAAAAAATTAA-AACCAGAATAAATGCAAAGAATATGACACATTGTATGGAAGGCC-ATTTTTTTT--CTGA----AAATAGTTTAAATTCCTTTCCTCTATATGAGTATTAGGCTGCAAAATGGAGTCTCTCTTGAGAACCATCTAAGTCCTGGTATATCTGCTTGACTCACAAATACATGATTATAAGGCGAATGTAATCCATATTTATGTTGT-- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725972 338 + 4093027 AAATAAGCAT---AATAC---TAATAGTATATA----------AACCAT--------AAAGT--AATctttaacatgcattattttatct---aatcctc-ctaaacatcctctagtataacttggtgagaaaa---gtaataacatcttcattctaaatatt-aaaaaaacttaa-aaccagaATAAATGCAAAGAACATGACACATTGTATGGAAAGCC-ATTTTTTT---CTGA----AAATAGTTTAAATTCTTTTCCTCTATATGAGTATTAGATTGCAAAATGGAGTCTCTTTTGAGAACCATCTAAGTCCTGGTATATCTGCTTGACTCACAAATACATGATTATAAGGCGAATGTAATCCATATTTACGTTGT-- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1620298 335 - 9149476 AAATAAACAT---AATAC---TAATAGTACATA----------AGTCAG--------GAAGTAAAATGTTTAACATATTTTATCTGATCT--------TT-CCAACCATGCTTGGTTGTAGCTTGGTGGGAAAA---GTAGTAATGTCTCCATTTTAAATATT-TAAAAGCCTTGA-AACCAGAAAAAATGCAAAGCACCCGACACAGGGTAT-GAAGACA-TTTTTTTTTTCTTGACAATAAATAGTTTAACTTATTTTCCTCTA------TATTAGACTAAGAAATGGAGTCTCTCCTCAGAATCATCTGCATTCTGGTATATCAACTTAAACCACAAATGCATGATTAAAGGGCAAATATAATCCATATTTATGTTGC-- i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11069270 322 + 30473821 AGATAAACAT---AATAC---TAATAGTACATA----------AGCCAG--------GAAGTAAAATGTTCAACATATTTTATCTGGTCC--------TTGCAAACCATCTGCCATTATATCTTGATGGGAAAAAATATAGTAATATCTCCAATTTAAAGATT-TTAAAACCTTGACAAAGGAAAAAAATGCAAAGCACATCACACAGGATGTGGAAGGTA-ATTTTTTT---CCGACAATAAGTAGTTCAACATCCTCTCCTCTA------TACTAGATTGAAAAAAGGAG----------------TCTAAGTCCTTGCATATCAGCTTAAACCACAAATGCATGATTAAAGGGCAAATGCAACCCATATTTATGTTGC-- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45776897 326 - 149736546 -aattagcatcaaaatac---aaacagcaccaggcccatccacaacTAT--------GAAGTCAG---------ATACATTGTTTTATCTGCTAA---CT-CTATATGGCATTCTTTGTAGCTTGGTGGAGAAA---ATAGTACAGTTTTCTTTTT---TGTG-AA-----------AACCAGAAAAGGTGCAAAAATTATGACAGAGGGATAGAAAAATATTTTTATTT---CTGA----CAACAGTTGAACTTTCTTCCATCAAAA-----AATATACTGAGCATCCTAATCTAGCCACAGACCCTTCTGAGTCCTGGCAAATCTACTTGAACCACAAACACATGATTAAAGGGCAAATGTAATCCATATTTATGCTTC-- i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1850030 310 - 2187301 ATAATAGTAT---AATAA---CAACAGTACATA----------AGCCAT--------GAAGTAAAATGACGAacaca---tatttcttct---gatcctc-ccaatcatcctctattctagcttaatggacatg---gtaataatatccccattttaaa-gtt-aagaaaccttga-aaccagaaagAAGGCAAAGCACGTATCACAGGACAT--------------------CTAG----------TGTAATTTTCTTCCCTCTA------AACTAAACTGAGTAGAAGAACATCTCCTCAGAACCATCTGAATCCTGGTAAATTTACTTCAACTACAAACACATGATTAAAGGGCAAATGTAATCCATATTTATGCTGCTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=13923.000000 s hg38.chrUn_KI270749v1 113658 1 + 158759 T s panTro5.chr3 202000872 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768911 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587850 1 + 86207423 T i nomLeu3.chr21 C 0 I 1 s rheMac8.chr2 66068816 1 + 204787373 T i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61000668 1 - 192460366 T i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11112632 1 - 17224310 T i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17424813 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64496289 1 - 101219884 T i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 882256 1 - 924385 T i manLeu1.NW_012098965v1 C 0 I 1 s calJac3.chr15 46058359 1 - 98464013 T i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27729972 1 + 27742158 T i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 267394 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3726310 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 I 1 s micMur3.chr32 1620633 1 - 9149476 T i micMur3.chr32 C 0 I 2 s otoGar3.GL873534 11069592 1 + 30473821 T i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45777223 1 - 149736546 T i mm10.chr6 C 0 I 4 s dasNov3.JH563077 1850340 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I e colAng1.NW_012114711v1 6723247 3 - 10587913 I a score=2866910.000000 s hg38.chrUn_KI270749v1 113659 213 + 158759 AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGTGATATGGGAAAAAAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTACA-TTTT s panTro5.chr3 202000873 213 - 202621043 AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTACA-TTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768912 213 - 205426864 AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTACA-TTTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587852 213 + 86207423 AAAAAAGATTAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCCACTAAAGTTGAAAGACATGGAATATTCATATAAGTGGAGTACA-TTTT i nomLeu3.chr21 I 1 C 0 s rheMac8.chr2 66068818 212 + 204787373 AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATACCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTC i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61000670 212 - 192460366 AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATACCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCTTATAAATGGAGTATA-TTTC i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11112634 212 - 17224310 AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATGCCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTC i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17424815 212 - 41321030 AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGACTTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATACCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTC i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64496291 212 - 101219884 AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTATCAATTCCTAAATATGCT-ATAGCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATACAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACCAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTC i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 882258 212 - 924385 AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGACTTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATACCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATACATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTC i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6723250 212 - 10587913 AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATAGCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTACA-TTTC i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46058361 214 - 98464013 AAAAAAGATGAAAATCCATAAAGCACTGTTATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCTGACAGCAACAAAGAGACAGATGTTTGGTTTTATTCCATTGCCAGCGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTACGTTTTT i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27729974 213 + 27742158 AAAAAAGATGAAAATCCATAAAGCACTGTGATCATATTTAGAGAATTTTCAATCAAACGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGAGATATAGAAAAAGAAGGCTATTAATAAGCATACATTCTACTAAAGTTGAAAGACATGGAATATTTATATAAATGGAGTACA-TTTT i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 267396 212 - 4835464 AAAAAAGATGAAAATCCATAAAGCACTGTGATCGTATTTAGAGAATTTTCAATCAAACGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATG-TTGGTTTTATTCCATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTTATATAAATGGAGTACA-TTTT i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3726312 213 + 4093027 AAGAAAGATGAAAATCCATAAAGCACTGTGATCATATTTAGAGAATTTTCAATCAAACGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTT i aotNan1.NW_018502033v1 I 1 C 0 s micMur3.chr32 1620636 213 - 9149476 AAAAAAGATATGAATCCATAAAGTAGTGCGATCATATTTACAGAATTTTCAATCAAACCATTCTGCCAATTTTTAAATATGCTGGTAGCAACAAAGAAACAGATGTCTGGTTTTATTCCTTTGCCAGTGATATAGGAAAGGAAAACTATTAATAAGCATAAATTCTACCCAAGTTGAAAGACATGGAATATTCACATAAATGGAGTACA-TTTT i micMur3.chr32 I 2 I 225 s otoGar3.GL873534 11069595 212 + 30473821 AAAAAAGATAAAAATCTGTAAAGGACTGTGATCATATTTACAGGATCTTCTATCAAACCATTCTGTCAATTTTCAAATATG-TGATAGCAACAAAGAAACAGATGTCTGGTTTTATTCCTTTGCCAGTGATATAGGAAAGGAAAACTATTAATAAGCATAAATTCTATTAAAGTTGAAAGACATGGAATATTCACATACATGGAATACA-TTTT i otoGar3.GL873534 I 2 C 0 s mm10.chr6 45777228 206 - 149736546 AAAAAAGATGAAAATCTATAAAGCACTGTGATCATATTTAGAAAATTTTCAATCAAACCGTTCTGCCAATTCCTAAATGCGCTGATACCAGCAAAGAAACAGATGTCTCATTGCATTCCTCTGCCAAGGCTG-GGGAGAAGAAAACTGTTCCTAAGCAGAAATTCTGCTGTGCTTGAAAGCTATGGCACACTCAAACAAGTGAGTTC------- i mm10.chr6 I 4 C 0 s dasNov3.JH563077 1850341 213 - 2187301 AAAAAAAAAAAAAAGATGTAAAGTGCCGTGATCATATTTAGAAAATTTCCAATCAAACCATTCTGCCAATTCCTAAATATGCTGATAGCAGCGAAGAAACAGATGTCTGGTTTCATTCCATTGCCAGTGATATAGAAAGGGAAAACTATTCCTAAGCATAAATTCTCCTGAAGTTGAAAGACTTGGAATATTCATATAAATGGAGTACC-TTTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=278714.000000 s hg38.chrUn_KI270749v1 113872 25 + 158759 ACCACTTTTTATA----CTCAAGAAAATA s panTro5.chr3 202001086 25 - 202621043 ACCACTTTTTATA----CTCAAGAAAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769125 25 - 205426864 ACCACTTTTTATA----CTCAAGAAAATA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588065 25 + 86207423 ACCACTTTTTATA----CTCAAGAAAATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069030 25 + 204787373 ACCACTTTTAATA----CTCAAGAAAATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000882 25 - 192460366 ACCACTTTTAATA----CTCAAGAAAATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112846 25 - 17224310 ACCACTTTTAATA----CTCAAGAAAATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425027 25 - 41321030 ACCACTTTTAATA----CTCAAGAAAATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496503 25 - 101219884 ACCACTTTTGATA----CTTAAGAAAATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882470 25 - 924385 ACCACTTTTAATA----CTCAAGAAAATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723462 25 - 10587913 ACCACTTTTAATA----CTCAAGAAAATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058575 25 - 98464013 ACCACTTTTTATA----CTCAAGAAAATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730187 25 + 27742158 ACCACTTTTTATA----CTCAAGAAAATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267608 25 - 4835464 ACCACTTTTTATA----CTCAAGACAATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726525 25 + 4093027 ACCACTTTTTATA----CTCAAGAAAATA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069807 25 + 30473821 GCCACATTCTACA----CTCAAGAAAATA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45777434 21 - 149736546 CCTACTGTCTAAA----CTCAAG----TA i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1850554 29 - 2187301 GCCACTTCTTAAACAACCTCAAGAAAATA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=83061.000000 s hg38.chrUn_KI270749v1 113897 8 + 158759 Acatgaaa s panTro5.chr3 202001111 8 - 202621043 Acatgaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769150 8 - 205426864 Acatgaaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588090 8 + 86207423 Acatgaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069055 8 + 204787373 Acatgaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000907 8 - 192460366 Acatgaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112871 8 - 17224310 Acatgaaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425052 8 - 41321030 Acatgaaa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496528 8 - 101219884 Acatgaaa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882495 8 - 924385 Acatgaaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723487 8 - 10587913 Acatgaaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058600 8 - 98464013 ATATgaaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730212 8 + 27742158 ATATgaaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267633 8 - 4835464 ATATgaaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726550 8 + 4093027 ATATgaaa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069832 8 + 30473821 ATGTGGGA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45777455 8 - 149736546 AGATGGAA i mm10.chr6 C 0 I 395 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I e dasNov3.JH563077 1850583 0 - 2187301 C a score=47415.000000 s hg38.chrUn_KI270749v1 113905 5 + 158759 aataa s panTro5.chr3 202001119 5 - 202621043 aataa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769158 5 - 205426864 aataa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588098 5 + 86207423 aataa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069063 5 + 204787373 aatga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000915 5 - 192460366 aatga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112879 5 - 17224310 aatga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425060 5 - 41321030 aatga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496536 5 - 101219884 aatga i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882503 5 - 924385 aatga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723495 5 - 10587913 aataa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058608 5 - 98464013 aataa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730220 5 + 27742158 aataa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267641 5 - 4835464 aataa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726558 5 + 4093027 aataa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069840 5 + 30473821 AATAA i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I e dasNov3.JH563077 1850583 0 - 2187301 C a score=786269.000000 s hg38.chrUn_KI270749v1 113910 106 + 158759 ctgtacagggtactaggcttaatacccggatagtgaaataatctgcacaacaaactcccatgacacaaatttacctctgcaacgaacctgcacatgcaccc-caaac s panTro5.chr3 202001124 106 - 202621043 ctgtacagggtactaggcttaatacccggatagtgaaataatctgtacaacaaacccccatgacacaagtttacctctgcaacgaacctgcacatgcaccc-caaac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769163 106 - 205426864 ctgtacagggtactaggcttaatacccggatagtgaaataatctgtacaacaaacccccatgacacaagtttacctctgcaacgaacctgcacatgcaccc-caaac i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588103 106 + 86207423 ctgtacaggctactaggcttaatacccggatagtgaaataatctgtacaacaaactcccacgacacaagtttacctctgcaacgaacctgcacatgcaccc-caaac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069068 106 + 204787373 ctatacaaggtagtaggcttaatacctgggtagtgccataatctgtacaacaaacgcccactacacaagcttacctctgcaatgaacctgcacatgcaccc-caaac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000920 106 - 192460366 ctatacaaggtagtaggcttaatacctgggtagtgccataatctgtacaacaaacgcccactacacaagcttacctctgcaatgaacctgcacatgcaccc-caaac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112884 106 - 17224310 ctacacaaggtagtaggcttcatacctgggtagtgccataatctgtacaacaaacgcccactacacaagcttacctctgcaatgaacctgcacatgcaccc-caaac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425065 106 - 41321030 ctatacaaggtagtaggcttaatacctgggtagtgccataatccgtacaacaaacgcccactacacaagcttacctctgcaatgaacctgcacatgcaccc-caaac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496541 106 - 101219884 ctatacaaggtagtaggcttaatacctgggtagtgacataatctgtaaaacagatgcccactacacaagcttgcctctgcattgaacctgcacatgcaccc-caaac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882508 106 - 924385 ctatacaaggtagtaggcttaatacctgggtagtgccataatctgtacagcaaacgcccactacagaagcttacctctgcaatgaacctgcacatgcaccc-caaac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723500 106 - 10587913 ctatacaaggtagtaggcttaatacctgggtagtgacataatctgtacaacaaacacccactacgcaagcttacctctgcaatgaccctgcacatgcaccc-cagac i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058613 106 - 98464013 ttatacagagcactaggcttattacttgggta-tgtaataatctttacaacgaactcccaatacacaagttcacttctgcaacaaacctgcacaggtacccttaaac i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730225 107 + 27742158 ttatacagggcactaggcttattacctgggtagtgaaatcatctttaaaaccagttcccaagacacaagttcacttctgcaacaaacctgcagaggtgcccttaaac i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267646 107 - 4835464 ttatacagggcactaggcttattacctgggtagtgaaatcatctttaaaacaaactcccaagacacaagttcacttctgcaacaaacctgcacaggtgcccttaaac i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726563 107 + 4093027 ttatacagggcactaggcttattacctgggtagtgaaataatctttacaacaaactcccaagacacaagttcacttctgcaacaaacctgcacagttacccttaaac i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e otoGar3.GL873534 11069845 0 + 30473821 C e canFam3.chr20 16604990 196 + 58134056 I e dasNov3.JH563077 1850583 0 - 2187301 C a score=147040.000000 s hg38.chrUn_KI270749v1 114016 31 + 158759 ttaaaataa--aaatt--aaaaaagaaaaAAATAG s panTro5.chr3 202001230 31 - 202621043 ctaaaataa--aaatt--aaaaaagaaaaAAATAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769269 30 - 205426864 ctaaaataa--aaatt--aaaaaag-aaaaAATAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588209 30 + 86207423 ttaaaataa--aaatt--aaaaaag-aaCAAATAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069174 31 + 204787373 ttaaaacaa--aagtt--aaaaaagaaaaAAATAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001026 26 - 192460366 tt-----aa--aagtt--aaaaaagaaaaAAATAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112990 31 - 17224310 ttaaaacaa--aagtt--aaaaaagaaaaaaatag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425171 30 - 41321030 ttaaaacaa--aagtt--aaaaaag-aaaaAATAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496647 31 - 101219884 ttaaaacaa--aagtt--aaaaaagaaaaAAATAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882614 30 - 924385 ttaaaacaa--aagtt--aaaaaag-aaaaAATAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723606 31 - 10587913 ttaaaacaa--aggtt--aaaaaagaaaaAAATAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058719 26 - 98464013 ttaaaataattaagtt----a-----aaaaaaTAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730332 26 + 27742158 ttaaaataa--aagtt--aaa-----aaaaaaTAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267753 28 - 4835464 ttaaaataa--aagtttttaa-----aaaaaaTAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726670 27 + 4093027 ttaaaataattaagtt---aa-----aaaaaaTAG i aotNan1.NW_018502033v1 C 0 C 0 s dasNov3.JH563077 1850583 10 - 2187301 TTAGAATTT--A----------------------- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e otoGar3.GL873534 11069845 0 + 30473821 C e canFam3.chr20 16604990 196 + 58134056 I a score=933135.000000 s hg38.chrUn_KI270749v1 114047 111 + 158759 TTATATAGTAAAGAAA----AAGTAGTAAGTGTCAGCGGGAGACTTCAAAA--TTATGAACAAAGTAAAAGAGGAACGAGGGTAGGGTGTCAGATCTAAAT---AAAAGA--AATACAAAAA s panTro5.chr3 202001261 111 - 202621043 TTATATAGTAAAGAAA----AAGTAGTAAGTGTCAGTGGGAGACTTCAAAA--TTATGAACAAAGTAAAAGAGGAACGAGGGTGGGGTGTCAGATCTAAAT---AAAAGA--AATACAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769299 111 - 205426864 TTATATAGTAAAGAAA----AAGTAGTAAGTGTCAGTGGGAGACTTCAAAA--TTATGAACAAAGTAAAAGAGGAACGAGGGTGGGGTGTCAGATCTAAAT---AAAAGA--AATACAAAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588239 111 + 86207423 TTATACAGTAAAGAAA----AAGTAGTAAGTGTCAGTGGGAGACTTCAAAA--TTATGAACAAAGTAAAAGAGGAACGAGGGTGGGATGTCAGATCTGaat---aaaaga--aatacaaaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069205 110 + 204787373 TTATATAATAAAGAAA----AAGTAATAAGTGTCAGTGAGAGACTTCAAAA--TTATTAACAAA-TAAAAGAGGAACAAAGATGGGATGTCAGATCCAAAT---AAAACA--AACACAAAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001052 110 - 192460366 TTATATAATAAAGAAA----AAGTAATAAGTGTCAGTGAGAGACTTCAAAA--TTATTAACAAA-TAAAAGAGGAACAAAGATGGGATGTCAGATCCAAAT---AAAACA--AACACAAAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113021 110 - 17224310 ttatataataaggaaa----aagtaataagtGTCAGTGAGAGACTTCAAAA--TTATTAACAAA-TAAAAGAGGGACAAAGATGGGATGTCAGATCCAAAT---AAAACA--AACACAAAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425201 110 - 41321030 TTATATAATAAAGAAA----AAGTAATAAGTGTCAGTGAGAGACTTCAAAA--TTATTAACAAA-TAAAAGAGGAACAAAGATGGGATGTCAGATCCAAAT---AAAACA--AACCCAAAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496678 107 - 101219884 TTATATAGTAAAGAAA----AAGTAGTAAGTGTCAGTGAGAGAC--CAAAA--TTATTAACAAA-TAAAGGAGGAACAAAGATGGGATGTCAGATCCAAAT---AAAACA--AA-CACAAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882644 110 - 924385 TTATATAATAAAGAAA----AAGTAATAAGTTTCAGTGAGAGACTTCAAAA--TTATTAACAAA-TAAAAGAGGAACAAAGATGGGATGTCAGATCCAAAT---AAAACA--AACCCCAAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723637 108 - 10587913 TTATATAGTAAAGAAA----AAGCAATAAGTGTCAGTGAGAGACTTCAAAA--TTATTAACAAA-TAAAAGAGGAACAAAGATGGGATGTCAGATCC--AT---AAAACA--AACACACAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058745 111 - 98464013 TCACATAGTAGAGAAA----AAATAATAAGTGTCAGTGAAAGATTTCAAAA--ATATTAACAAAGTAAAAGAGAAACAAGGCTGGCATGTCAGATCCAAAT---AAAACA--AACACAAAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730358 114 + 27742158 GTACACAGTAAAGAAA----AAATAGTAAGTATCAGGGAGAGATTTCAAAA--ATATTAACAAAGTAAAAGAGAAACAAGGCTGCGATGTCAGATCCAAATAAGAAGACA--AACACAAAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267781 96 - 4835464 TTACATAGTAAAGAAA----AAATAA----TGTCAGTGAGGG-------------ATTAACAAAGTAAAAGAGAAACAAGCCTGGGATATCAGATTCAAAT---AAGACA--AACACAAAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726697 115 + 4093027 TTACATAGTAAAGAAAAATTAAATAATAAGTGTCAGTGAGAGATTTCAAAA--ATATTAACAAAGTAAGAGAGAAACAAGGCTGGGATGTCAGCTCCAAAT---AAGACA--AACACAAAAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069845 105 + 30473821 TTATATAGCGAAGAGA----AA-TAATGTGTGTCAATGAGAGATTTC-AAA--TTATTAGCAAAATAAAGGGGGG----GGGTGCAATGTTAGAGCCGTAT---AAAACA--AACACACAAA i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1850593 104 - 2187301 TTATACAGT---GAAA----AAATAATAAGCATCAGTGAGAAACTTCAAAAACTTATTCACAAAATAAAAGGGGAAAAA--------TGTCAGATTCAAAT---AAAACAATAACACAAAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57730718 1551 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=20847.000000 s hg38.chrUn_KI270749v1 114158 3 + 158759 ATA-- s panTro5.chr3 202001372 3 - 202621043 ATA-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769410 3 - 205426864 ATA-- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588350 3 + 86207423 ata-- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069315 3 + 204787373 ATA-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001162 3 - 192460366 ATA-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113131 3 - 17224310 ATA-- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425311 3 - 41321030 ATA-- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496785 3 - 101219884 ATA-- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882754 3 - 924385 ATA-- i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57732269 3 + 181502896 aaa-- i nasLar1.chr2 I 1551 C 0 s colAng1.NW_012114711v1 6723745 3 - 10587913 AAA-- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058856 3 - 98464013 ATA-- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730472 3 + 27742158 ATA-- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267877 3 - 4835464 ATA-- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726812 3 + 4093027 ATA-- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069950 3 + 30473821 AAA-- i otoGar3.GL873534 C 0 I 1 s dasNov3.JH563077 1850697 3 - 2187301 --AGC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1381252 1553 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1235489 1551 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=34580.000000 s hg38.chrUn_KI270749v1 114161 2 + 158759 AT s panTro5.chr3 202001375 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769413 2 - 205426864 AT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588353 2 + 86207423 at i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069318 2 + 204787373 AT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61001165 2 - 192460366 AT i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11113134 2 - 17224310 AT i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17425314 2 - 41321030 AT i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64496788 2 - 101219884 AT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 882757 2 - 924385 AT i manLeu1.NW_012098965v1 C 0 I 1 s nasLar1.chr2 57732272 2 + 181502896 at i nasLar1.chr2 C 0 I 1681 s colAng1.NW_012114711v1 6723748 2 - 10587913 AT i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1382805 2 - 1467263 AT i rhiRox1.KN296641v1 I 1553 I 1679 s rhiBie1.NW_016820128v1 1237040 2 - 2311269 AT i rhiBie1.NW_016820128v1 I 1551 I 1138 s calJac3.chr15 46058859 2 - 98464013 AT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730475 2 + 27742158 AT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267880 2 - 4835464 AT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726815 2 + 4093027 AT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069954 2 + 30473821 AT i otoGar3.GL873534 I 1 I 2 s dasNov3.JH563077 1850700 2 - 2187301 AT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e micMur3.chr32 1620849 225 - 9149476 I e papAnu3.chr2 59557863 3221 + 187378091 I e ponAbe2.chr3 69657006 1523 + 202140232 I e tarSyr2.KE939134v1 180430 744 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=25649.000000 s hg38.chrUn_KI270749v1 114163 3 + 158759 AAA s panTro5.chr3 202001377 3 - 202621043 AAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769415 3 - 205426864 AAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588355 3 + 86207423 aaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069321 2 + 204787373 -AA i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61001168 2 - 192460366 -AA i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11113137 2 - 17224310 -AA i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17425317 2 - 41321030 -AA i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64496791 2 - 101219884 -AA i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 882760 2 - 924385 -AA i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6723751 2 - 10587913 -AA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46058861 3 - 98464013 AAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730477 3 + 27742158 AAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267882 3 - 4835464 AAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726817 3 + 4093027 AAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069958 3 + 30473821 AAA i otoGar3.GL873534 I 2 C 0 s dasNov3.JH563077 1850702 3 - 2187301 GAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59557863 3221 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69657006 1523 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=42248.000000 s hg38.chrUn_KI270749v1 114166 4 + 158759 GAAA s panTro5.chr3 202001380 4 - 202621043 GAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769418 4 - 205426864 GAAA i panPan2.chr3 C 0 C 0 s ponAbe2.chr3 69658529 4 + 202140232 GAAA i ponAbe2.chr3 I 1523 I 1672 s nomLeu3.chr21 67588358 4 + 86207423 gaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069323 3 + 204787373 -AAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001170 3 - 192460366 -AAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113139 3 - 17224310 -AAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425319 3 - 41321030 -AAA i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59561084 4 + 187378091 AAAA i papAnu3.chr2 I 3221 C 0 s chlSab2.chr22 64496793 3 - 101219884 -AAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882762 3 - 924385 -AAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723753 3 - 10587913 -AAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058864 4 - 98464013 GCAA i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27730480 4 + 27742158 GAAA i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 267885 4 - 4835464 GAAA i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3726820 4 + 4093027 GAAA i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11069961 4 + 30473821 AAAG i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1850705 4 - 2187301 GAAA i dasNov3.JH563077 C 0 I 1 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e nasLar1.chr2 57732274 1681 + 181502896 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 180430 744 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=4986.000000 s hg38.chrUn_KI270749v1 114170 1 + 158759 C s panTro5.chr3 202001384 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769422 1 - 205426864 C i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588362 1 + 86207423 c i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069326 1 + 204787373 T i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61001173 1 - 192460366 T i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11113142 1 - 17224310 T i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17425322 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 I 1 s papAnu3.chr2 59561088 1 + 187378091 T i papAnu3.chr2 C 0 I 1653 s chlSab2.chr22 64496796 1 - 101219884 T i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 882765 1 - 924385 T i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6723756 1 - 10587913 T i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46058869 1 - 98464013 C i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27730485 1 + 27742158 C i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 267890 1 - 4835464 C i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3726825 1 + 4093027 C i aotNan1.NW_018502033v1 I 1 C 0 s tarSyr2.KE939134v1 181174 1 + 958716 C i tarSyr2.KE939134v1 I 744 C 0 s otoGar3.GL873534 11069965 1 + 30473821 C i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1850710 1 - 2187301 T i dasNov3.JH563077 I 1 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e canFam3.chr20 16604990 196 + 58134056 I a score=25772.000000 s hg38.chrUn_KI270749v1 114171 2 + 158759 AA s panTro5.chr3 202001385 2 - 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769423 2 - 205426864 AA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588363 2 + 86207423 aa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069328 2 + 204787373 AA i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61001175 2 - 192460366 AA i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11113144 2 - 17224310 AA i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17425324 2 - 41321030 AA i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64496798 2 - 101219884 AA i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 882767 2 - 924385 AA i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6723758 2 - 10587913 AA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46058870 2 - 98464013 AA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730486 2 + 27742158 AA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267891 2 - 4835464 AA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726826 2 + 4093027 AA i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 181175 2 + 958716 AA i tarSyr2.KE939134v1 C 0 I 1293 s otoGar3.GL873534 11069966 2 + 30473821 AA i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1850711 2 - 2187301 AG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e canFam3.chr20 16604990 196 + 58134056 I a score=505182.000000 s hg38.chrUn_KI270749v1 114173 64 + 158759 CAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGCATG s panTro5.chr3 202001387 64 - 202621043 CAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTA-AATAATCATGAAAAAAGCATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769425 64 - 205426864 CAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGCATG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588365 63 + 86207423 caaaaTTTGCCAAAAA-------ATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGCATG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069330 63 + 204787373 CAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGTA-G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001177 63 - 192460366 CAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGTA-G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113146 63 - 17224310 CAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGTA-G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425326 63 - 41321030 CAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AACAATCATGAAAAAAGCA-G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496800 61 - 101219884 CAAAATTTGCCAAAAA------TATCCATACTAGAGAA---ACTTTTTT-AATAATCATGAAAAAAGCATG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882769 63 - 924385 CAAAATTTGCCAAAAA------TATCCATATTAGAGAAACTACTTTTTA-AATAACCATGAAAAAAGCA-G i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723760 64 - 10587913 CAAAACTTGCCAAAAA------TATCCATACTAGAGAAACCACTTTTTT-AACAATCATGAAAAAAGCATG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058872 65 - 98464013 CAAAATTTTTCTAAAA------TATTCACCCTAGACAAACTACTTTTTTGAATAACCACATAAAAAGCATG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730488 65 + 27742158 CAAAATTTTCCAAAAA------TATTCATACTAGACAAACTACTTTTTTGAATAACCACATAAAAAGCATG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267893 65 - 4835464 CAAAATTTTCCAAAAA------TATTCATACTAGACAAACTACTTTTTTGAATAACCACATAAAAAGCGTG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726828 65 + 4093027 CAAAATTTTCCAAAAA------TATTCATACTAGACAAACTACTTTTTTGAATAACTACATAAAAAGCATA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069968 69 + 30473821 CCAAGAATGCTAAAAATACACATATTTACATTGGAAGAATCGTTTCCAAAAATAACCATAAAAAACAGG-- i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1850713 62 - 2187301 CAGGGCCTGGCAAAGA------TATTCACTCTGGAGGAACTATATTTTAAAAGAACCATGAAAACATG--- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e micMur3.chr32 1620849 225 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=54801.000000 s hg38.chrUn_KI270749v1 114237 6 + 158759 ATTata s panTro5.chr3 202001451 6 - 202621043 ATTata i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769489 6 - 205426864 ATTata i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588428 6 + 86207423 ATTATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069393 6 + 204787373 ATTAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001240 6 - 192460366 ATTAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113209 6 - 17224310 ATTAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425389 6 - 41321030 ATTAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496861 6 - 101219884 ATTAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882832 6 - 924385 ATTAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723824 6 - 10587913 ATTAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058937 6 - 98464013 ATTAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730553 6 + 27742158 ATTAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267958 1 - 4835464 -----A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726893 6 + 4093027 ATTAAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1621074 6 - 9149476 attaca i micMur3.chr32 I 225 C 0 s otoGar3.GL873534 11070037 6 + 30473821 ACTCAA i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1850775 6 - 2187301 ATTAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777463 395 - 149736546 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=1466990.000000 s hg38.chrUn_KI270749v1 114243 142 + 158759 taaataaaag---aaaaaagcaatgactactaaaa--tagaatataaaacaataaaGAAAACCTGTAGTAAACTAAGAAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGTATTAAAAAAGGGTT s panTro5.chr3 202001457 142 - 202621043 taaataaaag---aaaaaagcaatgactactaaaa--tagaatataaaacaataaaGAAAACCTGTAGTAAACTAAGAAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGTATTAAAAAAGGGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769495 142 - 205426864 taaataaaag---aaaaaagcaatgactactaaaa--tagaatataaaacaataaaGAAAACCTGTAGTAAACTAAGAAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGTATTAAAAAAGGGTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588434 139 + 86207423 TAAATAAAAG--AAAAAAAGCAATGACTACTAAAA--TAGAATATAAAAC----AAGAAAGCCTGTAGTAAACTAAGAAATTGTTGAGAAAAATATTACTGGTGTTTTTGAAAGGCAAAATTGAAGTGACAGTATTAAAAAAGGGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069399 138 + 204787373 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGATTAAAAAAGGGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001246 138 - 192460366 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGATTAAAAAAGGGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113215 138 - 17224310 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGATTAAAAAAGGGTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425395 138 - 41321030 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGACAAAATTGAAGTGGCAGGATTAAAAAAGGGTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496867 138 - 101219884 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTAGTATTTTCAAAAGGTAAAATTGAAGTGGCAGGATTAAAAAAGGGTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882838 138 - 924385 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGACAAAATCGAAGTGGCAGGATTAAAAAAGGGTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723830 138 - 10587913 TAAATAAAAG---AATA----AATGACCACTAAAA--TAGAATATAAAACAGTAAAGAAAGCCTGTAGTAAACTAACGAATTGGTGAGAAAACTATTATCGGTATTTTCAAAAGGCAAAACTGACGTGGCAGGATTAAAAAAGGCTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058943 138 - 98464013 TAAATAAAAG--AAAAA----AATGACCACTAAAA--TAGAATATAAAATAATAAAGAAAGCCTGTAGTAAACTAAGAAATTGTTGAGAACGATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGAAT-AAAAAGGGCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730559 138 + 27742158 TAAATAGAAG--AAAAA----AATGACCACTTAAA--TAGAATATGAAATAATAAAGAAAGCCTGTAGTAAACTAAGAAATTGTTGAGAACAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGAAT-AAAAAGTGTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267959 140 - 4835464 TAAATAGAAGAAAAAAA----AAAGACCACTAAAA--TAGAATATAAAATAATAAAGAAAGCCTGTAGTAAACTAAGAAATTGTTGAGAACGATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGAAT-AAAAAGGGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726899 139 + 4093027 TAAATCAAAG-AAAAAA----AATGACCACTAAAA--TAGAATATAAAATAATAAAGAAAGCCTGTAGTAAACTAAGAAATTGTTGAGAAAGATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGAAT-AAAAAGGGTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1621080 138 - 9149476 taaataaaag---aaaa--acaatgattactaaaa--taatatataa--taataaataaAGTCTGTAGTAAACAAAGAAATTGCAAATAAAAATATCATTGGTATTTGCAAAAGGCAAAATTGATGTGGCTGGGAAAAATATGGGTT i micMur3.chr32 C 0 I 16 s otoGar3.GL873534 11070043 133 + 30473821 TATAGAAAAG---AAAA--ACAATAAACACTAAAA--TAGAACATGA---AAT-AATAAAGTATGTAGTAAGCAAAGAAACTGCAGAGAAAAAT---ATTGGTGTTTGCAAAAGGCAAAATCAATGTGGTGGGGAAAGACACATATT i otoGar3.GL873534 C 0 I 13 s mm10.chr6 45777858 138 - 149736546 TAAGTAAAAG---GAAGAAATATTGACTCTGAAAACTCTGAATATGA----TCAAGTAAAACCTGTAATAAACTGAGAAGCTGCACTGAAAACTAACATCAGGATCCAC-ACAGACAGAGT-GATGTAGCTgggaatgaaaaggctt i mm10.chr6 I 395 I 1060 s dasNov3.JH563077 1850781 139 - 2187301 TAAGCAAAAA---AAGA-AATAATGACCCCTAAAAA-TAGAACGTGAAATAATAAGTAAAGCCTATGGAGAACTAA-AAAGTACAGAGAAAAATATCCTTGGCATTTGCAAAAGGCAAAATTGATGTGACAGGGT--AAAAAAGACT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=87848.000000 s hg38.chrUn_KI270749v1 114385 9 + 158759 GTTGCACAC s panTro5.chr3 202001599 9 - 202621043 GTTGCACAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769637 9 - 205426864 GTTGCACAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588573 9 + 86207423 GTTACACAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069537 9 + 204787373 GTTACACAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001384 9 - 192460366 GTTACACAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113353 9 - 17224310 GTTACACAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425533 9 - 41321030 GTTACACAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497005 9 - 101219884 GTTACACAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882976 9 - 924385 GTTACACAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723968 9 - 10587913 GTTACACAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059081 9 - 98464013 GTTACCCAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730697 9 + 27742158 GTTACACAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268099 9 - 4835464 GTTACACAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727038 9 + 4093027 GTTACACAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070189 7 + 30473821 --TGCACAG i otoGar3.GL873534 I 13 C 0 s dasNov3.JH563077 1850920 9 - 2187301 GTCATACAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777996 1060 - 149736546 I e micMur3.chr32 1621218 16 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=11251.000000 s hg38.chrUn_KI270749v1 114394 2 + 158759 TG- s panTro5.chr3 202001608 2 - 202621043 TG- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769646 2 - 205426864 TG- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588582 2 + 86207423 TG- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069546 2 + 204787373 TG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001393 2 - 192460366 TG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113362 2 - 17224310 TG- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425542 2 - 41321030 TG- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497014 2 - 101219884 TG- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882985 2 - 924385 TG- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723977 2 - 10587913 TG- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059090 2 - 98464013 TA- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730706 2 + 27742158 TA- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268108 2 - 4835464 TA- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727047 2 + 4093027 TA- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1621234 2 - 9149476 TG- i micMur3.chr32 I 16 C 0 s otoGar3.GL873534 11070196 2 + 30473821 TG- i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1850929 2 - 2187301 -AA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777996 1060 - 149736546 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e canFam3.chr20 16604990 196 + 58134056 I a score=13365.000000 s hg38.chrUn_KI270749v1 114396 1 + 158759 T s panTro5.chr3 202001610 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769648 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588584 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069548 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001395 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113364 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425544 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497016 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882987 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723979 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059092 1 - 98464013 C i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730708 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268110 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727049 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1621236 1 - 9149476 T i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11070198 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16605186 1 + 58134056 T i canFam3.chr20 I 196 C 0 s dasNov3.JH563077 1850931 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45777996 1060 - 149736546 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=1338360.000000 s hg38.chrUn_KI270749v1 114397 115 + 158759 GTATATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTACCTATGTAGCTTATTCCTGCAGAAGAAAC----ATACCT------CAAAAATAGAATGA------GTCAACTCATGGTTAATAAATACATCAG s panTro5.chr3 202001611 115 - 202621043 GTGTATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTACCTATGTAGCTTATTCCTGCAGAAGAAAC----ATACCT------CAAAAATAGAATGA------GTCAACTCATGGCTAATAAATACATCAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769649 115 - 205426864 GTGTATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTACCTATGTAGCTTATTCCTGCAGAAGAAAC----ATACCT------CAAAAATAGAATGA------GTCAACTCATGGCCAATAAATACATCAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588585 115 + 86207423 GTATATTTA-AAAGGCGAATTAG---AAAAATGGCTTAATTACCTATGTAGCTTATTCCTGCAGAAGAAAC----ACACCT------CAAAAATAGAATGA------GTCAATTCATGGTTAATAAATACATCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069549 116 + 204787373 GTATATTTA-AAAGGCAAATTAG-AAAAAAATGGCCTAATTACCTATGTAGCTTATTCCTGCAGAAGAAAC----ATACC-------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATATATCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001396 116 - 192460366 GTATATTTA-AAAGGCAAATTAG-AAAAAAATGGCCTAATTACCTATGTAGCTTATTCCTGCAGAAGAAAC----ATACC-------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATATATCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113365 116 - 17224310 GTATATTTA-AAAGGCAAATTAG-AAAAATATGGCCTAATTACCTATGTAGCTTATTCCTGCAGAAGAAAC----ATACC-------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATATATCAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425545 117 - 41321030 GTATATTTA-AAAGGCAAATTAGAAAAAAAATGGCCTAATTACCTATGTAGCTTATTCCTGCAGAAGAAAC----ATACC-------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATATATCAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497017 116 - 101219884 GTATATTTA-AAAGGCAAATTAG--AAAAAATGGCTTAATTACCTATGTAGCTTATTCCTGCAGAAGAAAC----ATACCT------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATGTATCAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882988 117 - 924385 GTATATTTA-AAAGGCAAATTAGAAAAAAAATGGCCTAATTACCTATGTAGCTTATTCCTGCAGAAGAAAC----ATACC-------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATATATCAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723980 116 - 10587913 GTATATTTA-AAAGGCAAATAAG--AAAAAATGGCTTAATTACCTACGTAGCTGATTCCCGCAGAAGAAAC----ATACCT------CAAAAATAGAATTA------GTCAACTCCTCGTTAATAAATATATCAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059093 115 - 98464013 GCATATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTACCGATGTAGCTTATTCCCGCAGAATAAAC----ATATCT------CAAAAATAGAATGA------GTCAACTCCTGGTTGATAAATACATCAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730709 115 + 27742158 GCATATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTACCTATGTAGCTTATTCCTGCAGAAGACAT----ATACCT------CAAAAATAGAATGA------GTCAACTCCTGCTTGATAAATACATCAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268111 115 - 4835464 GCATATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTATGTATGTAGCTTATTCCTGCAGAAGAAAC----GTACCT------CAAAAATAGAATGA------GTCAACTCCTGCTTGATAAATACATCAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727050 121 + 4093027 GCATATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTGCCTATGTGGCTTATTCCTGCAGAAGAAAC----ATACCT------CAAAAATAGAATGAGTCAATGTCAATCCCTGGTTGATAAATACATCAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1621237 119 - 9149476 GCATGTTCA-GAAGGAAAATTGG---AAAAATGGCTTACTTATCTATGTCATTTATTCCTGCAAAAGAAAACAATAGACTT------CAAAAATAAAACAG------TTCAACTCATGGTTAAAAAATTTATCAG i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11070199 119 + 30473821 GCATGGTTA-GAAGACTAATTTG---GAAACTGGCTTAATTATCTATGTAGTTTATTCCCGCAAAACAAACCAATGGACCT------CAAAAATAAAACAG------CTCAACTCATGGTTAAAAAATGTATCAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45779056 115 - 149736546 GCATATTTATGAAGCTAAATTTG---GAAACTGGCCTAA-TACCTTTATTTTTTTTTTATTTAAGTAGAAG----AAACTC------CAAAAATAGGCTGA------TTTAACTTGTGCTTAGCAAATATAACAG i mm10.chr6 I 1060 I 666 s canFam3.chr20 16605187 124 + 58134056 GTGTATTAG-GAGAGCAAATTGG----GAAATGGCTAAATTAACTATGTATCTAATTCATGCAAAATAAACTGATAGACCTTAAAAAAAAAAAAAGAATGA------CTCAACTTGGGGTTAATGAAGGTATCAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1850932 118 - 2187301 GCATACCAG-GAGAGTAATTTGG----GAAATGATTAAATTAACTATACAGTTTATTCATACAAAAGAAACTGACAGATCT------CAAAAATAGAATGA------CTCACCTTATGATTAATAAATTTATTAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=10785.000000 s hg38.chrUn_KI270749v1 114512 1 + 158759 G s panTro5.chr3 202001726 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769764 1 - 205426864 G i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588700 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069665 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001512 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113481 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425662 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497133 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883105 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724096 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059208 1 - 98464013 G i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730824 1 + 27742158 G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268226 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727171 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1621356 1 - 9149476 A i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11070318 1 + 30473821 G i otoGar3.GL873534 C 0 I 261 s canFam3.chr20 16605311 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1851050 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=98866.000000 s hg38.chrUn_KI270749v1 114513 8 + 158759 AGAAACAG s panTro5.chr3 202001727 8 - 202621043 AGAAACAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769765 8 - 205426864 AGAAACAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588701 8 + 86207423 AGAAACAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069666 8 + 204787373 AGAAACAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001513 8 - 192460366 AGAAACAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113482 8 - 17224310 AGAAACAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425663 8 - 41321030 AGAAACAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497134 8 - 101219884 AGAAACAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883106 8 - 924385 AGAAACAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724097 8 - 10587913 AGAAACAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059209 8 - 98464013 AGAAACAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730825 8 + 27742158 AGAAACAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268227 8 - 4835464 AGAAACAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727172 8 + 4093027 AGAAACAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1621357 8 - 9149476 ATAAACAG i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11070580 8 + 30473821 AGAAACAG i otoGar3.GL873534 I 261 C 0 s canFam3.chr20 16605312 8 + 58134056 AGAAAAAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1851051 8 - 2187301 AGAAAGAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=1475267.000000 s hg38.chrUn_KI270749v1 114521 123 + 158759 GACATTCCAGCAATGAAAGAA---CCATCATTAAGGAAACAATTGAGGACAAACATCCTGACT-AATGAAAAGCCCAATTCTTTGAT---ATCGCACACAGCTCAATTCAGGAATG--------------------------ATATTCCAAAAAAT s panTro5.chr3 202001735 123 - 202621043 GACATTCCAGCAATGAAAGAA---CCATCATTAAGGAAACAATTGAGGACAAACATCCTGACT-AATGAAAAGCCCAATTCTTTGAT---ATCGCACACAGCTCAATTCAGGAATG--------------------------ATATTCCAAAAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769773 123 - 205426864 GACATTCCAGCAATGAAAGAA---CCATCATTAAGGAAACAATTGAGGACAAACATCCTGACT-AATGAAAAGCCCAATTCTTTGAT---ATCGCACACAGCTCAATTCAGGAATG--------------------------ATATTCCAAAAAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 0 123 - 17846 GACATTCCAGCAATGAAAGAA---CCATCATTAAGGAAACAATTGAGGACAAACATCCTGACT-AATGAAAAGCCCAATTCTTTGAT---ATCGCACACAGCTCAATTCAGGAATG--------------------------ATATTCCAAAAAAT i gorGor5.CYUI01007532v1 N 0 C 0 s nomLeu3.chr21 67588709 123 + 86207423 GAAATTCCAGCAATGAAAGAA---CCATCATTAAGGAAACAATTGAGGACAAACATCCTGACT-AATGAAAAGCCCAATTCTTTGAT---ACCACACACAGCTCAATTCAGGAATG--------------------------ATATTCCAAAAAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069674 123 + 204787373 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACACCCTGACT-AATGAAAAGCCCAATTCTTGGAT---ATTGCACACAGCTCAATTCAGGAATG--------------------------ATATTCCAAAAAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001521 123 - 192460366 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACACCCTGACT-AATGAAAAGCCCAATTCTTGGAT---ATTGCACACAGCTCAATTCAGGAATG--------------------------ATATTCCAAAAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113490 123 - 17224310 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACATCCTGACT-AATGAAAAGCCCAATTCTTGGAT---ATTGCACACAGCTCAATTCAGGAATG--------------------------ATATTCCAAAAAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425671 123 - 41321030 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACATCCTGACT-AATGAAAAGCCCAATTCTTGGAT---ATTGCACACAGCTCAATTCAGGAATG--------------------------ATATTCCAAAAAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497142 123 - 101219884 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACATCCTGACT-AATGAAAAGCCCAATTCTTGGAT---ATCGCACACAGCTCAATTCAGGAACG--------------------------ATATTCCAAAAAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883114 123 - 924385 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACATCCTGACT-AATGAAAAGCCCAATTCTTGGAT---ATTGCACACAGCTCAATTCAGGAATG--------------------------ATATTCCAAAAAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724105 123 - 10587913 GGAATTCCAGCAATGCAATAA---ACATCATTAAGGAAACAATTATGAACAAACATCCTGACT-AATGAAAAGCCCAATTCTTGGAT---ATCGCACACTGCTCAATTCAGGAATG--------------------------ATATTCCAAAAAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059217 122 - 98464013 AAAATTCCAGCAATGCAAGAA---CCATCATTAA-GAAACAATTGAGGACAAACATCCTGACT-AAAGAAAAACCCAGCTGTTTGAT---ACTGCACACAGCTCAATTCAGGAATG--------------------------ATATTTCAAAAAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730833 122 + 27742158 GAAATTCCAGCAATGCAAGAA---CCATCATTAA-GAAACAATTGAGGACAAACATCCTGACT-AATGAAAAGCCCAATTCTTTGAT---ACCGCACACAGCTCAATTCAGGAATC--------------------------ATATTCCAAAAAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268235 125 - 4835464 GAAATTCCAGCAATGCAGAACCGTCCATCATTAA-GAAACAATTGAGGACAAACATCCTGACT-AATGAAAAGCCCAATTCTTTGAT---ACCGCACACAGCTCAATTCAGGAACG--------------------------ATATTCCAAAAAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727180 122 + 4093027 AAAATTCCAGCAATGCAAGAA---CCATCATTAA-GAAACAATTGAGGACAAACATCCTGACT-AATGAAAAGCCCAATTCTTTGAT---ACTGCACACAGCTCAATTCAGGAATG--------------------------ATATTCCAAAAGAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1621365 124 - 9149476 GAAATTATAGCTATACGAAAA---CCATAATTAAGAAAACAATTGAGGACAAATATCCTGACTGAATAGAAAGCTCAGTTCTTTGAT---CCTGCACACAGATCACTCTAAGAGTG--------------------------ATAGTCCAAAAAAT i micMur3.chr32 C 0 I 84 s otoGar3.GL873534 11070588 124 + 30473821 GAGACTATAGCAATGCAGCAA---CCATAGTTAATAAAATAATTGAGAACAAAAATCCTGACTGTATAGAATGCCCAGTTCCTTGAT---CCTGCTCACAGCTTACTTTAAGAGTG--------------------------ATAGTCAGAATAAA i otoGar3.GL873534 C 0 I 2 s canFam3.chr20 16605320 123 + 58134056 -AACTTCTCTCAATGTAGAAA---CTATAATTAAGGGAAAAAATGACAACAAATATGCTAAATGAGTGGGAGGCTCAGCTGTTTGAA---AATGGCCACAGCACCATTCACAAGTG--------------------------GTATCAGAAAAAAA i canFam3.chr20 C 0 I 3 s dasNov3.JH563077 1851059 150 - 2187301 GATATTCTAGCAaagtaggaa---ccataattaaagaagcaggaggggggcacccacct--cc-catgagaggtcctaggtttggtttccattgcctcctaaagaaaaaaagaaagaaagaaaagaaataGGAGGAAAGAAAAAATTAGAAAAAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=281922.000000 s hg38.chrUn_KI270749v1 114644 26 + 158759 AATCA-----AAGTGCCTTTA-GAACTATT-AC s panTro5.chr3 202001858 26 - 202621043 AATCA-----AAGTGCCTTTA-GAACTATT-AC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769896 26 - 205426864 AATCA-----AAGTGCCTTTA-GAACTATT-AC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 123 26 - 17846 AATCA-----AAGTGCCTTTA-GAACTATT-AC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67588832 26 + 86207423 AATCA-----AAGTGCCTTTA-GAACTATT-AC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069797 26 + 204787373 AATCA-----AAGTGCCTTTA-GACCTATT-GC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001644 26 - 192460366 AATCA-----AAGTGCCTTTA-GACCTATT-GC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113613 26 - 17224310 AATCA-----AAGTGCCTTTA-GACCTATT-GC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425794 26 - 41321030 AATCA-----AAGTGCCTTTA-GACCTATT-GC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497265 26 - 101219884 AATCA-----AAGTGCCTTTA-GACCTATT-GC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883237 26 - 924385 AATCA-----AAGTGCCTTTA-GACCTATT-GC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724228 26 - 10587913 AATCA-----AAGTGCCTTTA-GACCTATT-GC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059339 27 - 98464013 AATTA-----AACTGCCTTTA-GACCTATTGGG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730955 26 + 27742158 AATTA-----AAGTGCCTTTA-GACCTATT-GG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268360 26 - 4835464 AATTA-----AAGTGCCTTTA-GACCTATT-GG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727302 26 + 4093027 AATTA-----AAGGGCCTTTA-GACCTATT-GG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070714 26 + 30473821 TTTTA-----AAGTGCCTTTA-GATTTCTG-GA i otoGar3.GL873534 I 2 C 0 s canFam3.chr20 16605446 28 + 58134056 AATCA---ACAAGTGCCTTTA-GACCTTTT-CA i canFam3.chr20 I 3 C 0 s dasNov3.JH563077 1851209 32 - 2187301 AATTTTTTTTCAGCGCCTTTATAATCtgtt-at i dasNov3.JH563077 C 0 I 401 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e micMur3.chr32 1621489 84 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=8145.000000 s hg38.chrUn_KI270749v1 114670 1 + 158759 C s panTro5.chr3 202001884 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769922 1 - 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 149 1 - 17846 C i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67588858 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069823 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001670 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113639 1 - 17224310 C i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425820 1 - 41321030 C i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497291 1 - 101219884 C i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883263 1 - 924385 C i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724254 1 - 10587913 C i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059366 1 - 98464013 C i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730981 1 + 27742158 C i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268386 1 - 4835464 C i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727328 1 + 4093027 C i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070740 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16605474 1 + 58134056 C i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e micMur3.chr32 1621489 84 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e dasNov3.JH563077 1851241 401 - 2187301 I a score=523754.000000 s hg38.chrUn_KI270749v1 114671 70 + 158759 CATGCTTTTACTTTCAGAAGG--CATT-------TTGTA-GTT-------ACAAAAGAAAGAA-CAGAGATATT--TGTAATTGTATCTA s panTro5.chr3 202001885 70 - 202621043 CATGCTTTTACTTTCAGAAGG--CATT-------TTGTA-GTT-------ACAAAAGAAAGAA-CAGAGATATT--TGTAATTGTATCTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769923 70 - 205426864 CATGCTTTTACTTTCAGAAGG--CATT-------TTGTA-GTT-------ACAAAAGAAAGAA-CAGAGATATT--TGTAATTGTATCTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 150 70 - 17846 CATGCTTTTACTTTCAGAAGG--CATT-------TTGTA-GTT-------ACAAAAGAAAGAA-CAGAGATATT--TGTAATTGTATCTA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67588859 70 + 86207423 CATGCTTTTACTTTCAGAAGG--CATT-------TTGTA-GTT-------ACAAAAGAAAGAA-CAGAGATATT--TGTAACTGTACCTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069824 55 + 204787373 CATGTTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAAGGAAGAA-CCGAGATAT----------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001671 55 - 192460366 CATGTTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAAGGAAGAA-CCGAGATAT----------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113640 55 - 17224310 CATGTTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAAGGAAGAA-CCGAGATAT----------------- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425821 55 - 41321030 CATGTTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAAGGAAGAA-CCGAGATAT----------------- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497292 55 - 101219884 CATATTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAAGGAAGAA-CGGAGATAT----------------- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883264 55 - 924385 CATGTTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAGGGAAGAA-CCGAGATAT----------------- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724255 55 - 10587913 CATGTTTTTACTTTCAGAAGG--CATT-------TTGGA-ATT-------ACAAAAGGAAGAA-CCGAGATAT----------------- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059367 54 - 98464013 CATGTTTTTACTTTCTGAAGA--CATT-------TTGTA-ATT-------ACAAAAGAAAGAA-CAAAGATA------------------ i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730982 54 + 27742158 CATGTTTTTACTTTCAGAAGA--CATT-------TTGTA-ATT-------ACAAAAGAAAGAA-CAAAGATA------------------ i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268387 54 - 4835464 CATGTTTTTACTTTCAGAAGA--CATT-------TTGTA-ATT-------ACAAAAGAAAGAA-CAAAGATA------------------ i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727329 54 + 4093027 CATGTTTTTACTTTCAGAAGA--CATT-------TTGTA-ATT-------ACAAAAGAAAGAA-CAAAGATA------------------ i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070741 70 + 30473821 CATGTTCTTATTTTTTGGAGGATTATT-------TTTTAGACT-------GCAAAAGGAAAAAGCTGAGATGATAGAGGAACTG------ i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16605475 62 + 58134056 AAAGTTTCCAGTTTTTGAAAG--CATTTAAAAAATTACA-AGT-------ATAAGGGGGAGTG-GTAAGGTAT----------------- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1851642 63 - 2187301 CAAGTCTATACTTTCTCAAGG--CATT-------TTTTT-GTTTGTTTGAATAATAGAAAATA-AAAAAGTATT---------------- i dasNov3.JH563077 I 401 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e micMur3.chr32 1621489 84 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=1188609.000000 s hg38.chrUn_KI270749v1 114741 92 + 158759 TAAGGATGCAAACTGCCCTCTGCCCTAAAATCTTTAATGACAGTACCACTGCTG--TAAATATAT-GTAAACATACTTTAGACACATGCAAGTTT s panTro5.chr3 202001955 92 - 202621043 TAAGGATGCAAACTGCCCTCTGCCCTAAAATCTTTAATGACAGTACCACTGCTG--TAAATATAT-GTAAACATACTTTAGACACACGCAAGTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769993 92 - 205426864 TAAGGATGCAAACTGCCCTCTGCCCTAAAATCTTTAATGACAGTACCACTGCTG--TAAATATAC-GTAAACATATTTTAGACACACGCAAGTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 220 92 - 17846 TAAGGATGTAAACTGCCCTCTGCCCTAAAATCTTTAATGACAGTACCACTGCTG--TAAATATAT-GTAAACATACTTTAGACACATGCAAGTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67588929 92 + 86207423 TAAAGATACAAACTGTCCTCTGCCCTAAAATCTTTAATGACAGCACTACTGCTG--TAAATATAT-GTAAACATACTTTAGACACATGCAAGTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069879 92 + 204787373 TAAGGATACAAACTGTCCGCTGTCCTAAAATCTTCAATGACAGTACCACTGCTG--TAAATATAT-GTAAGCATACTTTAGACACATGCAACTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001726 92 - 192460366 TAAGGATACAAACTGTCCGCTGTCCTAAAATCTTCAATGACAGTACCACTGCTG--TAAATATAT-GTAAGCATACTTTAGACACATGCAACTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113695 92 - 17224310 TAAGGATACAAACTGTCCGCTGTCCTAAAATCTTCAATGACAGTACCACTGCTG--TAAATATAT-GTAAGCATACTTTAGACACATGCAACTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425876 92 - 41321030 TAAGGATACAAATTGTCCGCTGTCCTAAAATCTTCAATGACAGTACCACTGCTG--TAAATATAT-GTAAGCATACTTTAGACACATGCAACTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497347 92 - 101219884 TAAGGATACAAACGGTCCGCTGCCCTAAAATCTTTAATGACAGTACCACTGCTG--TAAATGTAT-GTAAGCATACTTTAGACACATGAAACTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883319 92 - 924385 TAAGGATACAAATTGTCCGCTGTCCTAAAATCTTCAATGACAGTACCACTGCTG--TAAATATAT-GTAAGCATACTTTAGACACATGCAACTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724310 92 - 10587913 TAAGGATACAAACTGTCCGCTGCCCTAAAATCTTCAATGACAGTACCACTCCTG--TAAATATAT-GTAAGCATACTTTAGACACATGCAACTCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059421 92 - 98464013 TAAGGATACAAACTGTCCTTTGCCCTAAAATATTTAGTGACAATAACACGGCTG--TAAATTTAT-ATAAACATACTTAAGACACATGCAAGTCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731036 92 + 27742158 TAAGGATACAAACTGTCCCTTGCCCTAAAATATTTAATGACAATAACACTGCTG--TAAATTTAT-ATAAACATATTTAAGACACATGCAAGTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268441 92 - 4835464 TAAGGATACAAACTGTCCCTTGCCCTGAAATATTTAATGACAATAACCCTGCTG--TAAATTTAT-ATAAACATACTTAAGACACATGCAAGTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727383 92 + 4093027 TAAGGATACAAACTGTCCTTTGCCCTAAAATATTTAATGACAATAACACTGCTG--TAAATTTAT-ATCAACATACCTAAGACACATGCAAGTTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1621573 94 - 9149476 TAAGGGTGCAAACTGTCCTTTGCCCTAAAATCTTAAATGACAGTACCACTGCTATTTAAATTTAT-GTAAATATAATTTAGGCACATACAAGTTT i micMur3.chr32 I 84 I 142 s otoGar3.GL873534 11070811 89 + 30473821 --AGGATACAAAACGTCTTCAGCCCTAATATCTAGAATGACAGTACCACTGCTG--TAAATTTAT-ATGAATATCATTTAGTCACATACCAGTT- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16605537 91 + 58134056 TAAGGATACAAACTATC--TTGTCCTAAAAGCTTGAATGAGAGTATCACTGTTG--AAAATTTGTAAAAAACATACTTTAGTCACAGACAAGTTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1851705 82 - 2187301 --AAGACACAAACTGACCTTTACCCTAAAATCTTGAATGACAGTACCATTGCTA--TAAATTTAT-ATAACCATACTTTATATGTTT-------- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=1051140.000000 s hg38.chrUn_KI270749v1 114833 109 + 158759 TTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATAAGC--------------AAAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACTATAGTTGACATGC-AAACTT-----AG s panTro5.chr3 202002047 110 - 202621043 TTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATAAGC-------------AAAAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACTATAGTTGACATGC-AAACTT-----AG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770085 107 - 205426864 TTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATAAGC--------------AAAAAAAA--GGAAAAAGGGTATGTA------ACATGCATTTACTATAGTTGACATGC-AAACTT-----AG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 312 110 - 17846 TTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATAAGC-------------AAAAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACTATAGTTGACATGC-AAACTT-----AG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589021 107 + 86207423 TTTGAGGTTATATCAATAATATGTTT-CATATAACAAACTAAAAATAAGC---------------AAAAAAAATGGAAAAAGGGTATATA------ACATGCATTTACTATAGTTGACATG--AAACTT-----AG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069971 109 + 204787373 TTTGAGGTTATGTCAATAACAGGTTT-CATATAACAAACTAAAAATCAG--------------AAAAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001818 110 - 192460366 TTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATCAG-------------AAAAAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113787 109 - 17224310 TTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATCAG--------------AAAAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425968 116 - 41321030 TTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATCAGCAA-------AAAAAAAAAAAAATTGGAAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497439 123 - 101219884 TTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATCAGCaaaaaaaataaaaagaaaaaaaaaggaaaaagGGTATGTA------ACATGCATTTACCATACTTGACATGC-AAACTT-----AG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883411 117 - 924385 TTTGAGGTTATATCAATAACAGGTTT-CATATaacaaactaaaaatcagcaaa------aaaaaaaaaaaaaTTGGAAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724402 116 - 10587913 TTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATCAGCAA-------CAAAAAAAAAAAAATGGGAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059513 111 - 98464013 TTTGAGGTTATATCAATAAGGGTTTT-CATATAATGAACTAAAAATAAGC------------AAAAAAAGAAAAAGAAAAAGGGTATGTA------ACATACATTTACTATAGTTGAAATGC-AAACTT-----TG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731128 106 + 27742158 TTTGAAGTTATATCAATAACAGTTTT-CATATAATGAGCTAAAAATAAGC-----------------AAGAAAAGGAAAAAGGGTATGTA------ACATACTTTTACTATAGTTGAAATGC-AAACTT-----TG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268533 106 - 4835464 TTTGAAGTTATATCAATAACGGTTTT-CATATAACGAACTAAAAATAAGC-----------------AAAAAAAGGAAAAAGGGTATGTA------ACATACATTTACTATAGTTGAAATGC-AAACTT-----TG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727475 106 + 4093027 TTTGAGGTTATATCAATAACAGTTTT-CATATAAGGAACTAAAAATAAGC-----------------AAAAAAAGGAAAAAGGGTATGTA------ACCTACATTTACTGTAGTTGAAATCC-AAACTT-----TG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070900 119 + 30473821 TTTGAGGTTAAGTAAGTAATAAATTTATATATAAAGAATAACAGATAAGC----------------AAACAAAGGTGTAAAGTGTGTTCATTAACTACATTCATTAACTACAATGGGAATGC-AAAACGTAGGAAG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16605628 97 + 58134056 ---GCTGTTATATGAATAACAACTGTACACCTATGGAACTACAAGTATGT---------------------AAAGAGGAAAAGTTATGTA------TCACTCTTT----ATAATGGAAATGCAAAACTT-----AG i canFam3.chr20 C 0 I 3 s dasNov3.JH563077 1851787 101 - 2187301 TTGGAGATTATATGAAAAGCAAATT--CACATAAA----TTCAAATAAGC----------------AAACAAAAGGGAAAA--CTATACA------GCTCCTATTAACTACACTGCAAATTCAAAACTT-----AA i dasNov3.JH563077 C 0 I 3 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e micMur3.chr32 1621667 142 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=265847.000000 s hg38.chrUn_KI270749v1 114942 22 + 158759 AGTCCCTGCTTTAA-AAAATCAA s panTro5.chr3 202002157 22 - 202621043 AGTCCCTGCTTTAA-AAAATCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770192 22 - 205426864 AGTCCCTGCTTTAA-AAAATCAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 422 22 - 17846 AGTCCCTGCTTTAA-AAAATCAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589128 22 + 86207423 AGTCCCTGCTTTAA-AAAATCAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070080 22 + 204787373 AGTCCCAGCTTTAA-AAAATCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001928 22 - 192460366 AGTCCCAGCTTTAA-AAAATCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113896 22 - 17224310 AGTCCCAGCTTTAA-AAAATCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426084 22 - 41321030 AGTCCCAGGTTTAA-AAAATCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497562 22 - 101219884 AGTCCCAGCTTTAA-AAAATCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883528 22 - 924385 AGTCCCAGCTTTAA-AAAATCAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724518 22 - 10587913 AGTGCCAGCTTTAA-AAAATCAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059624 22 - 98464013 AGTTCCTGCTTTAA-AAAATCAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731234 22 + 27742158 AGTCCCTGCTTTAA-AAAATCAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268639 22 - 4835464 AGTCCCTGCTTTAA-AAAATCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727581 22 + 4093027 AGTCCCTGATTTAA-AAAATCAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071019 22 + 30473821 AGTCCCCACTTTAA-ACAATCAA i otoGar3.GL873534 C 0 I 167 s dasNov3.JH563077 1851891 23 - 2187301 AATCACAGCTTTAAGAAAATCAA i dasNov3.JH563077 I 3 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e micMur3.chr32 1621667 142 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e canFam3.chr20 16605725 3 + 58134056 I a score=93303.000000 s hg38.chrUn_KI270749v1 114964 10 + 158759 CAATGAggct s panTro5.chr3 202002179 10 - 202621043 CAATGAggct i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770214 10 - 205426864 CAACGAggct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 444 10 - 17846 CAATGAggct i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589150 10 + 86207423 CTATGAAgct i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070102 10 + 204787373 CTATGAggct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001950 10 - 192460366 CTATGAggct i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113918 10 - 17224310 CTATGAggct i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426106 10 - 41321030 CTATGAggtt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497584 10 - 101219884 CTATGAggct i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883550 10 - 924385 CTATGAggct i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724540 10 - 10587913 CTATGAgact i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059646 10 - 98464013 CTATGAggcc i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731256 10 + 27742158 CTATGCggcc i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268661 10 - 4835464 CTATGCggcc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727603 10 + 4093027 CTATGAggcc i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071208 10 + 30473821 TTTTTAggct i otoGar3.GL873534 I 167 C 0 s dasNov3.JH563077 1851914 10 - 2187301 CTCTAAAGTT i dasNov3.JH563077 C 0 I 4 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e micMur3.chr32 1621667 142 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e canFam3.chr20 16605725 3 + 58134056 I a score=2260763.000000 s hg38.chrUn_KI270749v1 114974 235 + 158759 gggcgcggtggctcactcctataatcccagcactttgggaggccaaggtaggcagatcacttgaggtcagcagttcgagaccagcct-gtccaatatgttgaaactgcatctccactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcagggccctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccgagat---cac s panTro5.chr3 202002189 235 - 202621043 gggcgcggtggctcactcctataatcccagcactttgggaggccgaggcaggcagatcacttaaggtcagcagttcgagaccagcct-ggccaatatgttgaaaccacgtctccactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagat---cac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770224 235 - 205426864 gggcatggtggctcactcctataatcccagcactttgggaggctgaggcaggcagatcacttgaggtcagcagttcgagaccagcct-ggccaatatgttgaaaccacgtctccactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagctaggcgtggtggcaggggcctgtagtcccagctacttgggaggctgaggcagaagaatcgcttgaacccgggaggcagaggttgcagtgagccgagat---cac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 454 235 - 17846 gggcacggtggctcactcctataatcccagcactttgggaggccgaggtaggcagatcacttgaggtcagcagttcgagaacagcct-ggccaatatgttgaaactgcgtctccactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagat---cac i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589160 235 + 86207423 gggtgcggtggctcactcctataatcccagcactttgggaggccgaggcaggcagatcacttgaggtcagcagttcgagaccagcct-ggccaatatgttgaaaccgcatctctactaa---------------------------------------------------------------------------------------------------aaacac-----aaaaattagctaggagtggtggcaggggcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagcggagat---cac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070112 235 + 204787373 gggcgtggtggctcacacctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgtggaaaccgcatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagat---cat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001960 235 - 192460366 gggcgcggtggctcacacctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgtggaaaccgcatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagat---cat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113928 235 - 17224310 gggtgcggtggctcacacctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgtggaaaccgcatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctactcgggaggccgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagat---cat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426116 235 - 41321030 gggcgcggtggctcacacctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgtggaaaccgcatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctactcgggaggctgaggcaggagaatcgcttgaacccgggaagcggaggttgcagtgacccgagat---cat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497594 334 - 101219884 gggcgcggtggctcacgcctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgttgaaaccgcatctctactaaaaatacaaacctgcacattatgcacatgtaccctagaactcaaagtataataataaaaaataaagaaaaaattaaaaaaaattaaaaaaaaataaaaataaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctactcgggaggctgaggcaggagaattgcttgaacccaggaggcggaagttgcagtgagccaagat---cgt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883560 235 - 924385 gggagcggtggctcacacctataatcccagcactttgggacgccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgtggaaacctcatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgacccgagat---tat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724550 235 - 10587913 gggcgtggtggctcacgcctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgttgaaactacatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcatggtggcaggggcctgtagtctcagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagtcgagat---cat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059656 231 - 98464013 aggtgcagtgacttacgcctgtaaccccagcactttgggaggccaaagcaggtagatcac--aaagtcaggagttggagaccagcct-ggccaatatggtgaaaccctatctttactaaa--------------------------------------------------------------------------------------------------aaatac-----aaaaattagctctgcatggttgtgggcaccagtagtcccaactactcagtaggctgaggcaggagaatctcttgaacccagagggcagaagttgcagtgagctgagat------ i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731266 230 + 27742158 aggtgcggtgactcatgcctgtaaccccagcactttgggaga-caaggcgggtagatcac--aaagtcaggagttggagacaagcct-ggccaatatggtgaaaccccatctttactgaa--------------------------------------------------------------------------------------------------aaatac-----aaaaattagctgtgcatggttgtgggcgcctgtagtcccaactactcagtaggctgagtcaggagaatctcttgaacccaggaggcggaagttgcaatgagctgagat------ i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268671 230 - 4835464 atgtgcggtgactcacgcttgtaacctcagcactttgggagg-caaggcgggcagatcac--aaagtcaggagttgtagaggagcct-caccaatatggtgaaaccccatctttactaaa--------------------------------------------------------------------------------------------------aaacac-----aaaaattagctgtgcatggttgtgggcgcctgtagtcacaactactcagtaggctgaggcaggagaatctcttgaacccaggaggcggaagttgcaatgagctcacat------ i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727613 234 + 4093027 aggtgcagtgactcacgcctgtaaccccagcactttgggaagccaaggtgggtagatcac--aaagtcaagagttggagaacagcct-ggccaatatggtgaaaccccatctttactaaa--------------------------------------------------------------------------------------------------aaatac-----aaaaattagctgtgcatggttgtgggcgcctgtagtcccaactactcagtaggctgaggcaggagaatctcttgaacccaggaggcggtagttgcaatgagctgagattgt--- i aotNan1.NW_018502033v1 C 0 I 32 s otoGar3.GL873534 11071218 233 + 30473821 aggtgcagtggctcacacctataatcttagcactttgggaggccaaggcaggaggactgcttgaggtcaggagtttgagaccagcctcagccaaaat---gaggccccatctctactaa---------------------------------------------------------------------------------------------------aaatatgtaaggaaaattagctcagcattgtggcaggtacctgtagtcccagctcctcaggacaccaaggcagaagaattgcttgaatccaaaagtgtgaagtctctgtaagcaagg-------- i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e micMur3.chr32 1621667 142 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e canFam3.chr20 16605725 3 + 58134056 I e dasNov3.JH563077 1851924 4 - 2187301 I a score=290358.000000 s hg38.chrUn_KI270749v1 115209 38 + 158759 accacacgccactacactccagcct-gggtgac--------agagcg s panTro5.chr3 202002424 38 - 202621043 actacacgccactacactccagcct-gggcgac--------agggcg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770459 38 - 205426864 actacacgccactacactccagcat-gggcgac--------agagcg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 689 38 - 17846 accacacgccactacactccagcct-gggtgac--------agagca i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589395 38 + 86207423 accacaagccactacactccagcct-gggtgac--------agagcg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070347 38 + 204787373 gccacatgccactacactccagcct-gtgtgac--------agagta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002195 38 - 192460366 gccacatgccactacactccagcct-gtgtgac--------agagta i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114163 38 - 17224310 gccacatgccactacactccagcct-gtgtaac--------agagta i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426351 38 - 41321030 gccacatgccactacactccagcct-gtgtgac--------agaacg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497928 46 - 101219884 gccacatgccacgacactccagcct-gtgcgacagagcgagaGAGCG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883795 38 - 924385 gccacatgccactacactccagcct-gtgcgac--------agagcg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724785 38 - 10587913 gccacatgccactacactccagcct-gtgcgac--------agagca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059887 34 - 98464013 ----catgccactgcactccagcct-cggagac--------acagca i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731496 34 + 27742158 ----catgccactgcactccagcct-gggagac--------agtgca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268901 34 - 4835464 ----cgtgccactgcactccagcct-gggagac--------agcgca i cebCap1.NW_016107467v1 C 0 C 0 s otoGar3.GL873534 11071451 37 + 30473821 --ctgaggccatgacactctagcctggggcaat--------agaatg i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e micMur3.chr32 1621667 142 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e aotNan1.NW_018502033v1 3727847 32 + 4093027 I e canFam3.chr20 16605725 3 + 58134056 I e dasNov3.JH563077 1851924 4 - 2187301 I a score=146594.000000 s hg38.chrUn_KI270749v1 115247 23 + 158759 agactccatct----cc----------------aaaaaaaaaa s panTro5.chr3 202002462 39 - 202621043 agactccatct----ccaaaaaaaaaaaaaaaaaaaaaaaaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770497 22 - 205426864 agactccatct----cc-----------------aaaaaaaaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 727 24 - 17846 agactccatct----cc---------------aaaaaaaaaaa i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589433 23 + 86207423 agactccgtct----aa----------------aaaaagaaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070385 39 + 204787373 agactccccct----ccaaaaaaaaaaaaaaaaaaaaaaaaaa i rheMac8.chr2 C 0 I 4 s macFas5.chr2 61002233 39 - 192460366 agactccacct----ccaaaaaaaaaaaaaaaaaaaaaaaaaa i macFas5.chr2 C 0 I 4 s macNem1.NW_012018021v1 11114201 16 - 17224310 agacttcacct----cc-----------------------aaa i macNem1.NW_012018021v1 C 0 I 4 s cerAty1.NW_012009469v1 17426389 22 - 41321030 agactccacct----c-----------------aaaaaaaaaa i cerAty1.NW_012009469v1 C 0 I 4 s chlSab2.chr22 64497974 28 - 101219884 AGACTCCACCT----CC-----------aaaaaaaaaaaaaaa i chlSab2.chr22 C 0 I 4 s manLeu1.NW_012098965v1 883833 22 - 924385 agactccacct----c-----------------aaaagaaaaa i manLeu1.NW_012098965v1 C 0 I 4 s colAng1.NW_012114711v1 6724823 23 - 10587913 agactccaccg----cc----------------aaaaaaaaaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059921 23 - 98464013 agactccatct----ca----------------aaaaaaaaaa i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27731530 23 + 27742158 agactccatct----ca----------------aaaaaaaaaa i saiBol1.JH378125 C 0 I 2 s cebCap1.NW_016107467v1 268935 23 - 4835464 agacttcatct----ca----------------aaaaaaaaaa i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3727879 27 + 4093027 agaatccatcttcaaca----------------aaaaaaacaa i aotNan1.NW_018502033v1 I 32 I 1 s otoGar3.GL873534 11071488 22 + 30473821 aga-tctatct----ca----------------aaaaaagaaa i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e micMur3.chr32 1621667 142 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1237042 1138 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e canFam3.chr20 16605725 3 + 58134056 I e dasNov3.JH563077 1851924 4 - 2187301 I a score=50507.000000 s hg38.chrUn_KI270749v1 115270 5 + 158759 aaaaa s panTro5.chr3 202002501 5 - 202621043 aaaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770519 5 - 205426864 aaaaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 751 5 - 17846 aaaaa i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589456 5 + 86207423 aaaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070428 5 + 204787373 aaaaa i rheMac8.chr2 I 4 C 0 s macFas5.chr2 61002276 5 - 192460366 aaaaa i macFas5.chr2 I 4 C 0 s macNem1.NW_012018021v1 11114221 5 - 17224310 aaaaa i macNem1.NW_012018021v1 I 4 C 0 s cerAty1.NW_012009469v1 17426415 5 - 41321030 aaaaa i cerAty1.NW_012009469v1 I 4 C 0 s chlSab2.chr22 64498006 5 - 101219884 aaaaa i chlSab2.chr22 I 4 C 0 s manLeu1.NW_012098965v1 883859 5 - 924385 aaaaa i manLeu1.NW_012098965v1 I 4 C 0 s colAng1.NW_012114711v1 6724846 5 - 10587913 aaaaa i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1238180 5 - 2311269 aaaca i rhiBie1.NW_016820128v1 I 1138 C 0 s calJac3.chr15 46059945 5 - 98464013 aaaaa i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27731555 5 + 27742158 aacaa i saiBol1.JH378125 I 2 C 0 s aotNan1.NW_018502033v1 3727907 5 + 4093027 agaaa i aotNan1.NW_018502033v1 I 1 C 0 s otoGar3.GL873534 11071510 5 + 30473821 aacaa i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45779171 666 - 149736546 I e micMur3.chr32 1621667 142 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e cebCap1.NW_016107467v1 268958 1 - 4835464 I e canFam3.chr20 16605725 3 + 58134056 I e dasNov3.JH563077 1851924 4 - 2187301 I a score=28944.000000 s hg38.chrUn_KI270749v1 115275 2 + 158759 aa s panTro5.chr3 202002506 2 - 202621043 aa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770524 2 - 205426864 aa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 756 2 - 17846 aa i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589461 2 + 86207423 aa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070433 2 + 204787373 aa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002281 2 - 192460366 aa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114226 2 - 17224310 aa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426420 2 - 41321030 aa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498011 2 - 101219884 aa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883864 2 - 924385 aa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724851 2 - 10587913 aa i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1238185 2 - 2311269 aa i rhiBie1.NW_016820128v1 C 0 C 0 s calJac3.chr15 46059950 2 - 98464013 aa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731560 2 + 27742158 aa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268959 1 - 4835464 -a i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3727912 2 + 4093027 aa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071515 2 + 30473821 aa i otoGar3.GL873534 C 0 T 483 s mm10.chr6 45779837 2 - 149736546 AA i mm10.chr6 I 666 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1621667 142 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e canFam3.chr20 16605725 3 + 58134056 I e dasNov3.JH563077 1851924 4 - 2187301 I a score=11871.000000 s hg38.chrUn_KI270749v1 115277 1 + 158759 a s panTro5.chr3 202002508 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770526 1 - 205426864 a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 758 1 - 17846 a i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589463 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070435 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002283 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114228 1 - 17224310 a i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426422 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498013 1 - 101219884 a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883866 1 - 924385 a i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724853 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1238187 1 - 2311269 a i rhiBie1.NW_016820128v1 C 0 I 553 s calJac3.chr15 46059952 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731562 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268960 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727914 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071034 1 + 30473821 C i otoGar3.GL873534 T 483 C 0 s mm10.chr6 45779839 1 - 149736546 A i mm10.chr6 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1621667 142 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e canFam3.chr20 16605725 3 + 58134056 I e dasNov3.JH563077 1851924 4 - 2187301 I a score=178373.000000 s hg38.chrUn_KI270749v1 115278 16 + 158759 aaTCAACTATGAAGTT s panTro5.chr3 202002509 16 - 202621043 aaTCAACTATGAAGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770527 16 - 205426864 aaTCAACTATGAAGTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 759 16 - 17846 aaTCAACTATGAAGTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589464 16 + 86207423 aaTCAGCTACGAAGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070436 16 + 204787373 aTTCAGCTATGAAGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002284 16 - 192460366 aTTCAGCTATGAAGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114229 16 - 17224310 aTTCAGCTATGAAGTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426423 16 - 41321030 aaTCAACTATGAAGTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498014 16 - 101219884 aaTCAACTATGAAGTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883867 16 - 924385 TTTCAACTATGAAGTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724854 16 - 10587913 aGTCAACTATGAAGTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059953 16 - 98464013 aaTTAACTATGAAGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731563 16 + 27742158 aaaTAACTATGAAGTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268961 16 - 4835464 aaTTAACTATGAAGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727915 15 + 4093027 aaTCTAATATG-AGTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071035 16 + 30473821 AATCAAGTAGGAAATT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45779840 16 - 149736546 AACCAACAATAAAGTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16605728 16 + 58134056 AATCAACTATGAATTT i canFam3.chr20 I 3 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1621667 142 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1238188 553 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e dasNov3.JH563077 1851924 4 - 2187301 I a score=67944.000000 s hg38.chrUn_KI270749v1 115294 4 + 158759 CAAC s panTro5.chr3 202002525 4 - 202621043 CGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770543 4 - 205426864 CAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 775 4 - 17846 CAAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589480 4 + 86207423 CAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070452 4 + 204787373 CAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002300 4 - 192460366 CAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114245 4 - 17224310 CAAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426439 4 - 41321030 CAAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498030 4 - 101219884 CAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883883 4 - 924385 CAAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724870 4 - 10587913 CAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059969 4 - 98464013 CAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731579 4 + 27742158 CAAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268977 4 - 4835464 CAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727930 4 + 4093027 CAAC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1621809 4 - 9149476 CAAC i micMur3.chr32 I 142 C 0 s otoGar3.GL873534 11071051 4 + 30473821 CAAC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45779856 4 - 149736546 CAGC i mm10.chr6 C 0 C 0 s canFam3.chr20 16605744 4 + 58134056 CAAC i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1238188 553 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I e dasNov3.JH563077 1851924 4 - 2187301 I a score=1477469.000000 s hg38.chrUn_KI270749v1 115298 117 + 158759 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATCAAGAGAATGAAAAAGAATGTAGCTATTAGAA-TTTATAAAGCTATAAACTATATCAGTATAGAAAAAGATATATTGGAAGAAATAA s panTro5.chr3 202002529 117 - 202621043 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATCAAGAGAATGAAAAAGAATGTAGCTATTAGAA-TTTATAAAGCTATAAACTATATAGGTATAGAAAAAGATATATTGGAAGAAATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770547 117 - 205426864 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATCAAGAGAATGAAAAAGAATGTGGCTATTAGAA-TTTATAAAGCTATAAACTATATAGGTATAGAAAAAGATATATTGGAAGAAATAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 779 117 - 17846 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATCAAGAGAATGAAAAAGAATGTAGCTATTAGAA-TTTATAAAGCTATAAACTATATCAGTATAGAAAAAGATATATTGGAAGAAATAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589484 117 + 86207423 AACTGCAAAATGTT----TAATCAA------AAG--AGTTTATCAAGAGAATGAAAAAGAATGTAGCTATTAGAA-TTTATAAGGCTATAAACTATATCAGTATATAAAAAGATATAAAGGAAGAAATAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070456 117 + 204787373 AATTGCAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATATAGCTATTAGAA-TTTATAAGGCTATGAACTACATCAGTATGGAAAAAGATATATTGGAAGAAATAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002304 117 - 192460366 AATTGCAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATATAGCTATTAGAA-TTTATAAGGCTATGAACTACATCAGTATGGAAAAAGATATATTGGAAGAAATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114249 117 - 17224310 AATTGCAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATATAGCTATTAGAA-TTTATGAGGCTATGAACTACATCAGTATGGAAAAAGATATATTGGAAGAAATAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426443 117 - 41321030 AATTGCAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATATAGCTATTAGAA-TTTATAAGGCTATGAACTACATCAGTATAGAAAAAGATATATTGGAAGAAATAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498034 117 - 101219884 AATTGCAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATGTAGCTATCAGAA-TTTATAAGGCTATGAGCTACATCAGTATAGAAAAAGATATATTGGAAGAAATAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883887 117 - 924385 AATTACAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATATAGCTATTAGAA-TTTATAAGGCTATGAACTACATCAGTATAGAAAAAGATATATTGGAAGAAATAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724874 117 - 10587913 AATTGCAAGCTGTT----TAATT-A------AAG--AGTTTATCAAGAGAATGAAATAGAATGTAGCTATCAGAATTTTATAAGTCTATGAACTACATCAGTATAGAAAAAGATATATTAGAAGAAATAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059973 114 - 98464013 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATTAAGAAAATG--AAAAAATGTAGCTATTAGAA-TAAATAAGGCTATGAACTATATCAGTATAGAAAAAGATATACTGGAAGAAA-AA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731583 117 + 27742158 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATTAAGAGAATGAAAAAAAATGTAGCTATTAGAA-TTTACAAGGCTATGAACTGTATCAGTATAGAAAAAGATAAACTGGAAGAAATAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268981 116 - 4835464 AATTGCAAAATGTT----TAATCAA------AAG--GGTTTATTAAGAGAATG-AAAAAAATATAGCTAATAGAA-TTTATAAGGCTATGAACTATATCAGTATAGAAAAAGATATACTGGAAGAAATAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727934 113 + 4093027 AATTGCAAAATG-T----TAATCAA------AAG--AGTTTATT-CGAGAATG--AAAAAATGTAGCTATTAGAA-TTTATAAAGCTATGAACTATATCAGTATAGAAAAAGATATACTGGAAGAAATAA i aotNan1.NW_018502033v1 C 0 I 7034 s micMur3.chr32 1621813 113 - 9149476 AATGGCAAGATGTT----TAATCAA------AAC--AGTTTATCAAGAGAATGAAAAAGTATGTAGCTATTAGAA-TTTATAAGATTATGGGCTATATTAAT----ACAAAGATATATCAGAATAAATAA i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11071055 127 + 30473821 TATTGGAAATTGTTCCGATATTCAACTATTGGAA--ACGTTATCAAGAGAATACAAGTATGAGTAGCTTTTAGAA-TTTATAAGCCTATGGACTATTTTAGTATAGACAAAGATATATCAGAAGAAGTAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45779860 104 - 149736546 AATGGTAAAATATG----TATTGAA------TG----------TAATGGAAGGAACAAATATGTGCCTATTGAAA-TGTCCTAGGATTCAGGCTGTATTGGC-CAGATAAAAATG----ACAAGAGATGA i mm10.chr6 C 0 C 0 s canFam3.chr20 16605748 119 + 58134056 AAGTGCAAAAGTTT----CAAGCAA------AAGATAGTTTCCCAGAGGAGTGTAAAAGTATGTCGCTATTAGAA-TTTATACGTATATGGTCTATATCAACATAGACAAAGATATATCAGAAGAAATAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1851928 116 - 2187301 AATAGCAAGATATT----TAACCAA------ATC--AGTTTATCAATAGAATGAAAATATATGTATTTATTAGCA-ATTATAAGCAAATGTACTGTATCAGTATAGAAAAAGATTTATCAGAAGAAAAA- i dasNov3.JH563077 I 4 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1238188 553 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=310168.000000 s hg38.chrUn_KI270749v1 115415 23 + 158759 AACAGTCGGTACTTTTAATGTAT s panTro5.chr3 202002646 23 - 202621043 AACAGTCGGTACTTCTAATGTAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770664 23 - 205426864 AACAGTCGGTACTTTTAATGTAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 896 23 - 17846 AACAGTCGGTACTTTTAATGTAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589601 23 + 86207423 AACAGTTGGTACCTTTAATGTAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070573 23 + 204787373 AACAGTTGGTACTTTTAATGTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002421 23 - 192460366 AACAGTTGGTACTTTTAATGTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114366 23 - 17224310 AACAGTTGGTACTTTTAATGTAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426560 23 - 41321030 AACAGTTGGTACTTTTAATGTAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498151 23 - 101219884 AACAGTTGGTACTTTTAATGTAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884004 23 - 924385 AACAGTTGGTACTTTTAATGTAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724991 23 - 10587913 AACAGTTGGTACTTTTAATGTAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060087 23 - 98464013 AACAGTTGGTATTTTAAATGTAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731700 23 + 27742158 AACAGTTGGTATTTTTAATGTAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269097 23 - 4835464 AACAGTTGGTATTTTTAATGTAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735081 23 + 4093027 AACAGTTGGTATTTTTAATGTAT i aotNan1.NW_018502033v1 I 7034 C 0 s micMur3.chr32 1621926 23 - 9149476 AATAGTTGGTATTTTAAAGATAT i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11071182 23 + 30473821 AATAGCTGATATTTTAATGATAG i otoGar3.GL873534 C 0 I 312 s mm10.chr6 45779964 17 - 149736546 ------CATTGTTTTAAGCATAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16605867 22 + 58134056 AATGGTTGCTA-TTTAAGTATAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852044 23 - 2187301 AATGGTTGGTATTTTAGGTATAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1238188 553 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=3351544.000000 s hg38.chrUn_KI270749v1 115438 273 + 158759 TCATTTTTTTCTCCCAATGTATCAAATATTGAATAAAAACATATATGC-------------------ACGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAATACTAT--CAATATATTGCGGCTTGAGGTGAT-AA-------------------------AAATATACAGACAG--------------------------------------------GTCAGTTTGGAACCATGCAT-AAAATTATTTATGAAAAATAGAAGCTCCATATTCATTTATTTAACAAAGATGTATAGACTATGTGCTTAACAAAATAAACACTG-AAAGAAGCCATCTTCATGGAAATACAGGATTATATT s panTro5.chr3 202002669 273 - 202621043 TCATTTTTTTCTCCCAATGTATCAAATATTGAATAAAAACGTATATGC-------------------ACGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAATACTAT--CAATATATTGTGGCTTGAGGTGAT-AA-------------------------AAATATACAGACAT--------------------------------------------GTCAGTTTGGAACCATGCAT-AAAATTATTTATGAAAAATAGAAGCTCCATATTCATTTATTTAACAAAGATGTACAGACTATGTGCTTAACAAAATAAACACTG-AAAGAAGCCATCTTCATGGAAATACAGGATTATATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770687 273 - 205426864 TCATTTTTTTCTCCCAATGTATCAAATATTGAATAAAAACATATATGC-------------------ACGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAATACTAT--CAATATATTGTGGCTTGAGGTGAT-AA-------------------------AAATATACAGACAG--------------------------------------------GTCAGTTTGGAACCATGCAT-AAAATTATTTATGAAAAATAGGAGCTCCATATTCATTTATTTAACAAAGATGTATAGACTATGTGCTTAACAAAATAAACACTG-AAAGAAGCCATCTTCATGGAAATACAGGATTATATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 919 273 - 17846 TCATTTTTTTCTCTCAATGTATCAAATATTGAATAAAAACATATATGC-------------------ACGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAATACTAT--ACATATATTGCGGCTTGAAGTGAT-AA-------------------------AAATATACAGACAG--------------------------------------------GTCAGTTTGGAACCATGCAT-AAAATTATTTATGAAAAATAGAAGCTCCATATTCATTTATTTAACAAAGATGTATAGACTATGTGCTTAACAAAATAAACACTG-AAAGAAGCCATCTTCATGGAAATACAGGATTATATT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589624 273 + 86207423 TCATTTTTTTCTCCCAATGTATCAAATATTGAAAAAAAATATATATGC-------------------AGAAAATATGGTGCTATAATCAAATGGATACTCA-ATGAATACTAT--CAACATATTGGGGCTTGAGGTGAT-AA-------------------------AAATATACAGACAG--------------------------------------------TTCAGTTTGGAACCATGCAT-AAAATTATTTATGAAAAATAGAAGCTCCATATTCATTTATTTAACAAAGATGTATAGACTATGTGCTTAACAAAATAAACACTG-AAAGAAGCCATCTTCATGGAAATACAGGATTATATT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070596 273 + 204787373 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGATGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTGGGGCTCGAGGTGAT-AA-------------------------AAATATGCTGACAG--------------------------------------------GTCAGTTTGGGACCATGCAT-AAAATTATTTATGAAAGAGAGAAGCCCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTGCTTAACAAAATAAACACTG-AGAGAAGCCAACTTCATGGAAATACAGGATTATATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002444 273 - 192460366 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGATGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTGGGGCTCGAGGTGAT-AA-------------------------AAATATGCTGACAG--------------------------------------------GTCAGTTTGGGACCATGCAT-AAAATTATTTATGAAAGAGAGAAGCCCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTGCTTAACAAAATAAACACTG-AGAGAAGCCAACTTCATGGAAATACAGGATTATATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114389 273 - 17224310 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGATGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTGGGGCTCGAGGTGAT-AA-------------------------AAATATGCTGACAG--------------------------------------------GTCAGTTTGGGACCATGCAT-AAAATTATTTACAAAAGAGAGAAGCTCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTGCTTAACAAAATAAACACTG-AGAGAAGCCAACTTCATGGAAATACAGGATTATATT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426583 273 - 41321030 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGATGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTGGGGCTCGAGGTGAT-AA-------------------------AAATATGCAGACAG--------------------------------------------GTCAGTTTGGGACCATGCAT-AAAATTATTTATGAAAGAGAGAAGCCCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTGCTTAACAAAATAAACACTG-AGAGAAGCCAACTTCATGGAAATACAGGATTATATT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498174 274 - 101219884 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAGCACTAT--CAAAATATTGGGGCTCAAGGTGATAAA-------------------------AAATATACAGACAT--------------------------------------------GTCAGTTTGAGACCATGCAT-AAAATTATTCTTGAAAAATAGAAACCCTATATTCATTTATTTAAAAAAGATAAATAGACTATGTGCTTAACAAAATAAACACTG-AAAGAAGCCAACTTCATGGAAATACAGGATTATATT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884027 273 - 924385 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTAGGGCTCGAGGTGAT-AA-------------------------AAATACGCAGACAG--------------------------------------------GTAAGTTTGGGACCATGCAT-AAAATTATTTATGAAAGAGAGAAGCCCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTGCTTAACAAAATAAACACTG-AGAGAAGCCAACTTCATGGAAACACAGGATTATATT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725014 271 - 10587913 TCAC-TTTTTCTCCCAATGTATCAAATACTGAATAAAAATATGTATGC-------------------AGGAAATATAGTGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTGGGGCTCGAGGTGAT-AA-------------------------AAATATATAGACAG--------------------------------------------GTCAGTTTGGGACCATGCAT-AAAATTAATTATGAAAAATAGAAGCCCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTACTTAACAAACTAAACACTG-AAAGAAGCCAACTTCATGGAAATACAGGA-CATATT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060110 270 - 98464013 TTA--TTTTTCCCCCAATGTACAAAATACTGAATAAAAATATACATGC-------------------AGGAAATATGGTGCTACAATCAAATGGGTACTCA-GTAAATACTAT--CAGAATATTGGGGCTTGAGGTGGT--A-------------------------AAATATAGAGATAG--------------------------------------------TTCAGTTTGGGGCCATGCTT-TAAATTATTTATGAAAAATAGAAGCCTTATATTCATTTATTTAGCAAAGATATATAGACTGTGAGCTCAGCAAAATAAACACTG-AAAGAAGCCAACTTCATGGAAACACAGAATTATGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731723 271 + 27742158 ATAT-TTTTTTCTCCCATGTACAAAATACTGAATAAAAATATACATGG-------------------AGGAAATATGGTGCTATAATCAAATGGGTACTCA-GTAAATACTAT--CAGAATATTGGGGCTTGAGGTTAT--A-------------------------AAATATACAGATAG--------------------------------------------GTCAGTTTGGGACCATGCTT-TAAATTATTTATGAAAAATAGAAGCCCTATATTCATTTACTTAACAAAGATATATAGACTATAAGCTCAGCAAAATAAACACTG-AAAGAAGCCAACTTCATGGAAATACAGAATTATGTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269120 269 - 4835464 TTA---TTTTCTCCCAATGTACAAAATACTGAATAAAAATATACATGT-------------------AGGAAATATGGTGCTATAATCAAATGGGTACTCA-GTAAATACTAT--CAGAATATTGGGGCTTAAGGTGAT--A-------------------------AAATATACAGATAG--------------------------------------------GTCAGTTTGGGACCATACTT-TAAATTATTTATGAAAAATAGAAGCCCTGTATTCATTTACTTAACAAAGATGTATAGACTATGAGCTCAGGAAAATAAACACTG-AAAGAAGCCAACTTCATGGCAATACAGAATTACCTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735104 271 + 4093027 TTAT-TTTTTCCTACAATGTGCAAAATACTGAATAAAAATATACATGC-------------------AGGAAATATGGTGCTATAATCAAATGGGTACTTA-GTAAATACCAT--CAGAATATTGGGGCTTGAGGTGAT--A-------------------------AAATATACAGATAG--------------------------------------------GTCAGTTTGGGACCATGCTT-TAAATTATTTATGAAAAATAGAAGCTCTATATTCATTTATTTAACAAAGATGTATAGACTATGAGCTCAGCAAAATAAGCACTG-AAAAAAGCCAACTTCATGAAAATACAGAATTATCTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1621949 271 - 9149476 -TCATCTTTTCTCCCAATGTATAAAATTTTAAATAAAAATATATATGG-------------------AGGGAATAAGTTGCTGTAATCAAATGAGTGCTCA-ATAAATGCTAC--CAAAATATTAGTAGTTGAGGTGAC-AA-------------------------AACTATGCAGATAG--------------------------------------------ATTAACTTGGGCCTATGTAT-AAAATTATTT-TGAAAAACAAATGCTCTAGATTTATTTACTTAACAAAGATTTATAGAATATGTGCTAAACAAAACAAACATTGCAGGGAAGCCAACTTCACGGAAACACAGAACTATAT- i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11071517 261 + 30473821 TCTTTCCTTTCTCCCAATATATAAAATCTTAAATAGAAACACACATGG-------------------AAGAAATATGTTTCTAAGATCAAATGACTATTCA-AAAAATGCTAT--CAAAATATTAGAACCTGAGGTGAT-AA-------------------------AAACAT--AGGTGC--------------------------------------------ATCAATTTAAAACCATGAAT-AAAATTATTTGTGAAAACCCGAAGCTTTG----TGTTTATTTAACACAGATTTGTAGACAATGTGCTACATGAAACAAACCCTGAAAACAAGCCAGCTTCATGGAAAC-----TCTAT-T- i otoGar3.GL873534 I 312 C 0 s mm10.chr6 45779981 244 - 149736546 -----TTATTTCCTCTAAGTGTCAAA-GTTACATAAAAGAATTAATGC-------------------------------------ATCAAA----TACTTA-TTGAATACTGGTATAAAATATCAAAGCTTAAGGTGAT--A-------------------------AAATTTACAGGGAA--------------------------------------------GTCAGTTTACATATAGAAGT-TAAATTATTTTTGTATAA-AGAAGACCCACATTCAATTATTTAACAAATGTACATAGAAGGT-TACATAAACAAATGAGCATTGAAAATAAGTTAATTTAATGCAAA-ACAGGCTTACAAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16605889 290 + 58134056 ----TCATTTTTCCCAATGTACAAAGTTTTAAATCACAATATTTATTCAAAAAGTAAGTTGCAAAAAAAAAAGTAAGTTGCTACGGTGAAGTGAATATTTATGTAAGTGCTAT--CAAAATACTGGAGATAGAGATGCT-GC-------------------------AAATAGACACATAG--------------------------------------------GCCAATTAGGGACCATGTTC-ACAGTGACTTAAATACCACAGAGTTCCTATATTCATTCATTTAATAAAGACTTATAGAATGTATGGTAAACAAAGTAAACAGTGAAAATAAGCCGACTTCATGGAAATATAGGATTATGTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852067 334 - 2187301 TCAT-TTTTTCTCCCAATATACAAAGTG--AAATAAAAATGTTTATTC-------------------AGGAAATACATTGCTATAATCAAAT------TCA-ACAAATGCCAG--GAAAATATTGTAACTCG-GGTgat-aaatagatgattgaaagatagattgatagatagacagatagatCGAGGCATGATAGAGTGATGATGATGCTCGATAAGACATAAAATCAGTTAGGAACCATGTATAAAAATCACTTAAATATAATAGAAGTTAAATAGTCACTCCTTTAACAAAACTTCATAGAATATGTGGTAAACAAAATAAACACTGAAAGGAAGACAAGCTCATGGAAATATAGGATTACCCT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1238188 553 - 2311269 I e tarSyr2.KE939134v1 181177 1293 + 958716 I a score=-32498.000000 s hg38.chrUn_KI270749v1 115711 6 + 158759 GG-------AAAA--- s panTro5.chr3 202002942 8 - 202621043 GG-AA----AAAA--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770960 6 - 205426864 GG-------AAAA--- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1192 7 - 17846 GG--A----AAAA--- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589897 9 + 86207423 GGAAA----AAAA--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070869 8 + 204787373 GG-GG----GAAA--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002717 8 - 192460366 GG-GG----GAAA--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114662 8 - 17224310 GG-GG----GAAA--- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426856 8 - 41321030 GG-GG----GAAA--- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498448 8 - 101219884 GG-GG----AAAA--- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884300 8 - 924385 GG-GG----GAAA--- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725285 9 - 10587913 GG-GG---AAAAA--- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060380 8 - 98464013 GG-GC----AAAA--- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731994 12 + 27742158 GG-GCAAAAAAAA--- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269389 8 - 4835464 GG-GC----AAAA--- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735375 8 + 4093027 GG-GC----AAAA--- i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 182470 6 + 958716 ---GG----AAAA--- i tarSyr2.KE939134v1 I 1293 I 99 s micMur3.chr32 1622220 6 - 9149476 GG-GC----AA----- i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11071778 6 + 30473821 GG-GC----AA----- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45780225 8 - 149736546 -----TGTCAGTA--- i mm10.chr6 C 0 C 0 s canFam3.chr20 16606179 7 + 58134056 GA-GC----AAA---- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852401 5 - 2187301 -----------GACCA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1238188 553 - 2311269 I a score=656736.000000 s hg38.chrUn_KI270749v1 115717 55 + 158759 AAAGTCACA-ATGCTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTG----GA s panTro5.chr3 202002950 59 - 202621043 AAAGTCACA-ATGCTTTCTTTCCTGATTTATTAAGGAA-------------------------AATCACAAAGAT-----------------------------TTTGGAAAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770966 59 - 205426864 AAAGTCACA-ATGCTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTGGAAAGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1199 59 - 17846 AAAGTCACA-ATGCTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGAC-----------------------------TTTGGAAAGA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589906 59 + 86207423 AAAGTCACA-ATGCTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTGGAAAGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070877 59 + 204787373 AAAGGCACA-ATGTTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTGGAAAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002725 59 - 192460366 AAAGGCACA-ATGTTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTGGAAAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114670 55 - 17224310 AAAGGCACA-ATGTTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTG----GA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426864 59 - 41321030 AAAGGCATA-ATGTTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTAGAAAGA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498456 59 - 101219884 AAAGGCACG-ATATTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTGGAAAGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884308 59 - 924385 AAAGGCACA-ATGTTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTAGAAAGA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725294 59 - 10587913 AAAGGCACA-ATGTTTTCTTTCCCGATTTATTAAGAAA-------------------------AATCACAAAGAT-----------------------------TTTGGAAAGA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060388 59 - 98464013 AAAGTCACA-ATGCTTTTTTACCTGATTTACTAAGGAA-------------------------AATTACCAAGAT-----------------------------TTTAAAAAGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732006 59 + 27742158 AAAGGCACA-ACGCCTTTTTACCTGATTTACTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTAGAAAGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269397 59 - 4835464 AAAGGCACA-ATGCTTTTTTACCTGATTTATTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTAGAAAGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735383 59 + 4093027 AAAGGCACA-ATGCTTTTTTACCTGATTTACTAAGGAA-------------------------AATTACAAAGAT-----------------------------TTTAGAAAGT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1622226 56 - 9149476 AAAGGCACACATGCTTTCTTTTCTGATATGCTGAAGAA-------------------------AACTACAAAGAT-----------------------------TTTGGA---- i micMur3.chr32 C 0 I 69 s otoGar3.GL873534 11071784 56 + 30473821 AAGGGCACACATGCATTCTTTCCTGATTTATTAAAGAA-------------------------AAGTGCAGTGAT-----------------------------GTTGGA---- i otoGar3.GL873534 C 0 I 4 s mm10.chr6 45780233 84 - 149736546 AACATTATC-CAGCTTTCTTG---GATTTGCTATAGAA-------------------------ACCCATACCTtttgttttttgtttgtttgtttgtttgtttgtttAACAAG- i mm10.chr6 C 0 C 0 s canFam3.chr20 16606186 81 + 58134056 AATGGCATGCATGCCTTCTTTCCTCACTCACTGGAAAacacacacacacacatacacacacacaaacacaAAACA-----------------------------GTTGGA---- i canFam3.chr20 C 0 I 3 s dasNov3.JH563077 1852406 56 - 2187301 AAAGTCATATGTGCTTACTTTCCTGATTTACTTAAGAA-------------------------AACTACAAAGAA-----------------------------GTTGGA---- i dasNov3.JH563077 C 0 I 4 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1238188 553 - 2311269 I e tarSyr2.KE939134v1 182476 99 + 958716 I a score=577561.000000 s hg38.chrUn_KI270749v1 115772 58 + 158759 CTCAATAAAATATATTTACTTCGTT----AAAAAAACACAAAC---CCATGCATACTAATAAGTA s panTro5.chr3 202003009 58 - 202621043 CTCAATAAAATATATTTACTTTGTT----AAAAAAACACAAAC---CTATGCACACTAATAAGGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771025 58 - 205426864 CTCAATAAAATATATTTACTTCGTT----AAAAAAACACAAAC---CTATGCATACTAATAAGGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1258 57 - 17846 CTCAATAAAATATATTTACTTCGTT-----AAAAAACACAAAC---CTGTGCATCCTAATAAGTA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589965 58 + 86207423 CTCAGTAAAATATATTTATTTCGTT----AAAAAAATACAAAC---CTATGCGTACTAGTAAGTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070936 59 + 204787373 CTCAGTAAAATATATTTATTTTATT-A--AAAAAAATACAAAG---CTATGCATACTAACAAGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002784 59 - 192460366 CTCAGTAAAATATATTTATTTTATT-A--AAAAAAATACAAAG---CTATGCATACTAACAAGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114725 59 - 17224310 CTCAGTAAAATATATTTATTTTATT-T--AAAAAAATACAAAG---CTATGCATACTAACAAGTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426923 60 - 41321030 CTCAGTAAAATATATTTATTTTATTAA--AAAAAAATACAAAG---CTATACATACTAACAAGTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498515 58 - 101219884 CTCAGTAAAATATATTTATTTCGTT----AAAAAAATACAAAC---CTATGCATACTAACAAGTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884367 58 - 924385 CTCAGTAAAATATATTTATTTTATT----TAAAAAATACAAAG---CTATGCATACTAACAAGTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725353 59 - 10587913 CTCAGTAAAATATATTTATTTCGTT-A--AAAAAAATACAAAC---CTATGCATACTAATAAGTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060447 60 - 98464013 TTTAGCAAAATATATTTATTTTGTT-A-GAAAATAATGAAAAC---CTATGCATACTAATAATTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732065 59 + 27742158 TTCAGCaaaatatatttattttgtt-a--aaaataatGAAAAC---CTGTGCATACTAATAAGTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269456 59 - 4835464 TTCAGCAAAATATATTTATTTTGTT-A-AAAAATAATGAAAAC---TTATGCATACTAATAA-TA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735442 61 + 4093027 TTCAGCAAAATATATTTATTTTGTT-AAAAAAATAATGAAAAC---CTATGCATACTAATAATTA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071844 59 + 30473821 CCCAGGAAAATATGCCCATTTAGAA-A--AAAATCAGACAAAC---GTATGCACACCAATAAATA i otoGar3.GL873534 I 4 C 0 s mm10.chr6 45780317 51 - 149736546 CTCAGCAAAGAGCATTTATTTTGTT-A--CAAAAAACT-----------TGGAAACAAATAACGA i mm10.chr6 C 0 C 0 s canFam3.chr20 16606270 59 + 58134056 CTGAGtaaaatatattcattt---t-a--aaaataatatGAACCTACTATGCAGACCAATAACTA i canFam3.chr20 I 3 C 0 s dasNov3.JH563077 1852466 59 - 2187301 CTTTGTAAAGCATATTCATTTTGTTGA--AAAATAATGGGAAC---CTATGCACACCAATAAGA- i dasNov3.JH563077 I 4 C 0 e eulFla1.LGHW01000501v1 29378 4457 + 635616 I e eulMac1.LGHX01000499v1 29240 4393 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1622282 69 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1238188 553 - 2311269 I e tarSyr2.KE939134v1 182476 99 + 958716 I a score=12024.000000 s hg38.chrUn_KI270749v1 115830 1 + 158759 G s panTro5.chr3 202003067 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771083 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1315 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590023 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070995 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002843 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114784 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426983 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498573 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884425 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725412 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060507 1 - 98464013 G i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732124 1 + 27742158 G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269515 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735503 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 33633 1 + 631505 T i eulMac1.LGHX01000499v1 I 4393 I 1 s eulFla1.LGHW01000501v1 33835 1 + 635616 T i eulFla1.LGHW01000501v1 I 4457 I 1 s otoGar3.GL873534 11071903 1 + 30473821 G i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45780368 1 - 149736546 G i mm10.chr6 C 0 C 0 s canFam3.chr20 16606329 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852525 1 - 2187301 G i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1622282 69 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1238188 553 - 2311269 I e tarSyr2.KE939134v1 182476 99 + 958716 I a score=3569.000000 s hg38.chrUn_KI270749v1 115831 1 + 158759 -A s panTro5.chr3 202003068 1 - 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771084 1 - 205426864 -A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1316 1 - 17846 -A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590024 1 + 86207423 -A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070996 1 + 204787373 -A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002844 1 - 192460366 -A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114785 1 - 17224310 -A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426984 1 - 41321030 -A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498574 1 - 101219884 -A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884426 1 - 924385 -A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725413 1 - 10587913 -A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060508 1 - 98464013 -A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732125 1 + 27742158 -A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269516 1 - 4835464 -A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735504 1 + 4093027 -A i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 182575 1 + 958716 -A i tarSyr2.KE939134v1 I 99 C 0 s canFam3.chr20 16606330 1 + 58134056 -G i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852526 1 - 2187301 T- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33836 1 + 635616 I e eulMac1.LGHX01000499v1 33634 1 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45780369 0 - 149736546 C e micMur3.chr32 1622282 69 - 9149476 I e rhiRox1.KN296641v1 1382807 1679 - 1467263 I e papAnu3.chr2 59561089 1653 + 187378091 I e nasLar1.chr2 57732274 1681 + 181502896 I e ponAbe2.chr3 69658533 1672 + 202140232 I e rhiBie1.NW_016820128v1 1238188 553 - 2311269 I e otoGar3.GL873534 11071904 1 + 30473821 I a score=26203.000000 s hg38.chrUn_KI270749v1 115832 1 + 158759 G s panTro5.chr3 202003069 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771085 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1317 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590025 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070997 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002845 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114786 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426985 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59562742 1 + 187378091 G i papAnu3.chr2 I 1653 C 0 s chlSab2.chr22 64498575 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884427 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57733955 1 + 181502896 G i nasLar1.chr2 I 1681 C 0 s colAng1.NW_012114711v1 6725414 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1384486 1 - 1467263 G i rhiRox1.KN296641v1 I 1679 C 0 s rhiBie1.NW_016820128v1 1238741 1 - 2311269 G i rhiBie1.NW_016820128v1 I 553 C 0 s calJac3.chr15 46060509 1 - 98464013 G i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732126 1 + 27742158 G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269517 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735505 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 182576 1 + 958716 G i tarSyr2.KE939134v1 C 0 C 0 s eulMac1.LGHX01000499v1 33635 1 + 631505 G i eulMac1.LGHX01000499v1 I 1 C 0 s eulFla1.LGHW01000501v1 33837 1 + 635616 G i eulFla1.LGHW01000501v1 I 1 C 0 s otoGar3.GL873534 11071905 1 + 30473821 G i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16606331 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852527 1 - 2187301 G i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45780369 0 - 149736546 C e micMur3.chr32 1622282 69 - 9149476 I e ponAbe2.chr3 69658533 1672 + 202140232 I a score=58318.000000 s hg38.chrUn_KI270749v1 115833 2 + 158759 AA s panTro5.chr3 202003070 2 - 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771086 2 - 205426864 AA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1318 2 - 17846 AA i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69660205 2 + 202140232 AA i ponAbe2.chr3 I 1672 C 0 s nomLeu3.chr21 67590026 2 + 86207423 AA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070998 2 + 204787373 AA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002846 2 - 192460366 AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114787 2 - 17224310 AA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426986 2 - 41321030 AA i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59562743 2 + 187378091 AA i papAnu3.chr2 C 0 C 0 s chlSab2.chr22 64498576 2 - 101219884 AA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884428 2 - 924385 AA i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57733956 2 + 181502896 AA i nasLar1.chr2 C 0 C 0 s colAng1.NW_012114711v1 6725415 2 - 10587913 AT i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1384487 2 - 1467263 AA i rhiRox1.KN296641v1 C 0 C 0 s rhiBie1.NW_016820128v1 1238742 2 - 2311269 AA i rhiBie1.NW_016820128v1 C 0 C 0 s calJac3.chr15 46060510 2 - 98464013 AA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732127 2 + 27742158 AA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269518 2 - 4835464 AA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735506 2 + 4093027 AA i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 182577 2 + 958716 AA i tarSyr2.KE939134v1 C 0 C 0 s eulMac1.LGHX01000499v1 33636 2 + 631505 AA i eulMac1.LGHX01000499v1 C 0 I 85 s eulFla1.LGHW01000501v1 33838 2 + 635616 AA i eulFla1.LGHW01000501v1 C 0 I 85 s otoGar3.GL873534 11071906 2 + 30473821 AA i otoGar3.GL873534 C 0 I 3 s canFam3.chr20 16606332 2 + 58134056 AA i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1852528 2 - 2187301 AA i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45780369 0 - 149736546 C e micMur3.chr32 1622282 69 - 9149476 I a score=21201.000000 s hg38.chrUn_KI270749v1 115835 4 + 158759 CCTC s panTro5.chr3 202003072 4 - 202621043 CCTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771088 4 - 205426864 CCTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1320 4 - 17846 CCTC i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69660207 4 + 202140232 CCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21 67590028 4 + 86207423 CCTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071000 4 + 204787373 CCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002848 4 - 192460366 CCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114789 4 - 17224310 CCTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426988 4 - 41321030 CCTT i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59562745 4 + 187378091 CCTT i papAnu3.chr2 C 0 C 0 s chlSab2.chr22 64498578 4 - 101219884 CCTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884430 4 - 924385 CCTT i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57733958 4 + 181502896 CCTT i nasLar1.chr2 C 0 C 0 s colAng1.NW_012114711v1 6725417 4 - 10587913 CCTT i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1384489 4 - 1467263 CCTT i rhiRox1.KN296641v1 C 0 C 0 s rhiBie1.NW_016820128v1 1238744 4 - 2311269 CCTT i rhiBie1.NW_016820128v1 C 0 C 0 s calJac3.chr15 46060512 4 - 98464013 CTTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732129 4 + 27742158 CTTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269520 4 - 4835464 CTTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735508 4 + 4093027 CTTC i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 182579 1 + 958716 T--- i tarSyr2.KE939134v1 C 0 I 943 s otoGar3.GL873534 11071911 1 + 30473821 C--- i otoGar3.GL873534 I 3 C 0 s mm10.chr6 45780369 1 - 149736546 C--- i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1852530 1 - 2187301 --T- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33840 85 + 635616 I e eulMac1.LGHX01000499v1 33638 85 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1622282 69 - 9149476 I e canFam3.chr20 16606334 1 + 58134056 I a score=11932.000000 s hg38.chrUn_KI270749v1 115839 1 + 158759 G s panTro5.chr3 202003076 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771092 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1324 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69660211 1 + 202140232 G i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21 67590032 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071004 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002852 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114793 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426992 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59562749 1 + 187378091 G i papAnu3.chr2 C 0 I 1494 s chlSab2.chr22 64498582 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884434 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57733962 1 + 181502896 G i nasLar1.chr2 C 0 I 1307 s colAng1.NW_012114711v1 6725421 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1384493 1 - 1467263 G i rhiRox1.KN296641v1 C 0 I 1306 s rhiBie1.NW_016820128v1 1238748 1 - 2311269 G i rhiBie1.NW_016820128v1 C 0 I 1491 s calJac3.chr15 46060516 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732133 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269524 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735512 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071912 1 + 30473821 G i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45780370 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16606335 1 + 58134056 A i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1852531 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33840 85 + 635616 I e eulMac1.LGHX01000499v1 33638 85 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1622282 69 - 9149476 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=10483.000000 s hg38.chrUn_KI270749v1 115840 1 + 158759 G s panTro5.chr3 202003077 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771093 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1325 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69660212 1 + 202140232 G i ponAbe2.chr3 C 0 I 1302 s nomLeu3.chr21 67590033 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071005 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002853 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114794 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426993 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498583 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884435 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725422 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060517 1 - 98464013 G i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732134 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269525 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735513 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1622351 1 - 9149476 G i micMur3.chr32 I 69 C 0 s mm10.chr6 45780371 1 - 149736546 G i mm10.chr6 C 0 C 0 s canFam3.chr20 16606336 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852532 1 - 2187301 G i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33840 85 + 635616 I e eulMac1.LGHX01000499v1 33638 85 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I e otoGar3.GL873534 11071913 0 + 30473821 C a score=1204602.000000 s hg38.chrUn_KI270749v1 115841 82 + 158759 TTGCTGCTTCTGTTGATTACGGAGACTACTGGGATAAGGCAA-TCAAAACTAAGAAATAATTTGCCATTCTCTTGGAAGCCAG s panTro5.chr3 202003078 82 - 202621043 TTGCTGCTTCTGTTGATTACGGAGACTACTGGGAGAAGGCAA-TCAAAACTAAGAAGTAATTTGCCAGTCTCTCGGAAGCCAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771094 82 - 205426864 TTGCTGCTTCTGTTGATTACGGAGACTACTGGGAGAAGGCAA-TCAAAACTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1326 82 - 17846 TTGCTGATTCTGTTGATTACGGAGACTACTGGGATAAGGTAA-TCAAAACTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590034 82 + 86207423 TTGCTGCTTCTGTTGATTACGGAGACTATAGGGAAAAGGCAA-TCAAAACTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071006 82 + 204787373 TCGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002854 82 - 192460366 TCGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114795 82 - 17224310 TCGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426994 82 - 41321030 TCGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498584 82 - 101219884 TTGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884436 82 - 924385 TCGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725423 82 - 10587913 TTACTGCTTCTGTTGATTACGGAGACCCCTGGGATAAGGTAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060518 82 - 98464013 TTGCTGTTTCTGTTGATTATGAAGACTCCTGGGATAAAGAAA-TCAAAAACAAGAAGTGATTTGCCAGTCTCTTGGAAGCCCG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732135 82 + 27742158 TTGCTGTTTCTGTTGATTATGGAGACTCCTAGGATAAGGAAA-TAAAAAATAAGAAGTGATTTGCCAGTGTCTTGGAAGCCCG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269526 82 - 4835464 TTGCTGTTTCTGTTGATTATGAAGACTCCTAGGATAAGGAAA-TCAAAAATAAGAAATGATTTGTCAGTCTCTTGGAAGACCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735514 82 + 4093027 TTGCTGTTTCTGTTGATTATGAAGACTCCTGGGATAAGGAAA-TCAAAAATAAGAAGTGATTTGCCAGCCTCTTGAAAGCCCG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1622352 82 - 9149476 TTGCTGCTTCTGTTGATTACTGACACTCCTAGGATAAGGCAA-TCAAAACTAAGAAATGGTTTGTCAGCCTCTTGGAAGCCGG i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11071913 80 + 30473821 --ACTGCTTCGGTTGATTACTGACACCCCTGGGATAAGGCGA-TCAAAACTAAGAAATGATTTGTCAGTGTTTTGGAAGCCTG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45780372 80 - 149736546 TTTCTGCTCTTGTTGATTCCTGAGACT--TGAGATATGACAA-TTAAGGCAAAGAATTCATCCATCAGTTTCTTGTAAAACAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16606337 82 + 58134056 TTGCTGCCTGTTTTGATTATGGAGACTCCTGGAGTAAGGCAA-TTAAAACTAAGAAATAATTTGGCACCCTGTTGGAAGCCAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852533 82 - 2187301 TTGCTGCTTCCACTGATTACTGAGACACCTGGGATAAGGCAATTCAAAAAAAAGAAATAATTTGTCAG-CTCTTGGAAGCCAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33840 85 + 635616 I e eulMac1.LGHX01000499v1 33638 85 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=9548.000000 s hg38.chrUn_KI270749v1 115923 1 + 158759 A s panTro5.chr3 202003160 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771176 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1408 1 - 17846 A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590116 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071088 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002936 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114877 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427076 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498666 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884518 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725505 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060600 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732217 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269608 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735596 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1622434 1 - 9149476 A i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 33723 1 + 631505 A i eulMac1.LGHX01000499v1 I 85 I 489 s eulFla1.LGHW01000501v1 33925 1 + 635616 A i eulFla1.LGHW01000501v1 I 85 I 489 s otoGar3.GL873534 11071993 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45780452 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16606419 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852615 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=447331.000000 s hg38.chrUn_KI270749v1 115924 32 + 158759 GAAAAAG-AAAAACACCAGAAACCTAGCCCTGG s panTro5.chr3 202003161 32 - 202621043 GGAAGAG-AAAACCACCAgaaacctagccctgg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771177 32 - 205426864 GAAAAAG-AAAACCACCAGAAACCTAGCCCTGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1409 32 - 17846 GAAAAAG-AAAAACACCAgaaacctagccctgg i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590117 32 + 86207423 GAAAAAG-aaaaacaccagaaacctagccctgg i nomLeu3.chr21 C 0 I 1 s rheMac8.chr2 66071089 32 + 204787373 GAAAAAG-AAAAACACCAGAAACCAAGCCCTGG i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61002937 32 - 192460366 GAAAAAG-AAAAACACCAGAAACCAAGCCCTGG i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11114878 32 - 17224310 GAAAAAG-AAAAACACCAGAAACCAAGCCCTGG i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17427077 33 - 41321030 GAAAAAGAAAAAACACCAGAAACCAAGCCCTGG i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64498667 32 - 101219884 GAAAAAG-AAAAACACCAGAAACTTAGCCCTGG i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 884519 32 - 924385 GAAAAAG-AAAAACACCAGAAACCAAGCCCTGG i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6725506 32 - 10587913 GAAAAAG-AAAAACACCAGAAACCTAGCCCTGG i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46060601 32 - 98464013 GAGAAAG-AAAAATACCAGAATCCTAGCCCTGG i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27732218 32 + 27742158 GAGAAAG-aaaaataccagaatcctagccctgg i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 269609 32 - 4835464 GAGAAAG-aaaaataccagaatcctagccctgg i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3735597 32 + 4093027 GAGAAAG-AAAAATACCAGAATCCTAACCCTGG i aotNan1.NW_018502033v1 C 0 I 1 s micMur3.chr32 1622435 32 - 9149476 AGTAAAa-ggaaacaccagaatcctagctctgg i micMur3.chr32 C 0 I 202 s otoGar3.GL873534 11071994 32 + 30473821 GGTTAAA-GGAAACACCAGCCTCCTAGCCCTGG i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45780453 32 - 149736546 GAGAAGG-GGAAACACCAGAGCACTACAGCTAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16606420 32 + 58134056 GAGAAAG-AAAAACACTACAGACCTAGCCAAGG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852616 32 - 2187301 GGGAAAG-GAAaagaccagaatcctagttctgg i dasNov3.JH563077 C 0 I 1 e eulFla1.LGHW01000501v1 33926 489 + 635616 I e eulMac1.LGHX01000499v1 33724 489 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=1407716.000000 s hg38.chrUn_KI270749v1 115956 127 + 158759 AATGTCATTGAATAGC----TGTAGGATAGTGGCAAGGATGTCAGC--------------------------------------ATCTGTAAC--ACTCGA-TTTTCTCTCCTGCAAAAATGAAACTATTAGTATTCCACCATATTGCAATTAATAT--CACTTGAGCTAA---TGT s panTro5.chr3 202003193 127 - 202621043 aatgtcactgaatagc----tgtaggacagtggcaaggatgtcagc--------------------------------------atctgtaac--actcga-ttttctcttctgcaaaaatgaaactattagtattccaccatattgcaattaatat--cacttgagctaa---tgt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771209 127 - 205426864 AATGTCACTGAATAGC----TGTAGGATAGTGGCAAGGATGTCAGC--------------------------------------AACTGTAAC--ACTCGA-TTTTCTCTTCTGCAAAAATGAAACTATTAGTATTCCACCATATTGCAATTAATAT--CACTTGAGCTAA---TGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1441 127 - 17846 aatgtcattgaatagc----tgtaggatagtggcaaggatgtcagc--------------------------------------atctgtaac--actcga-ttttctcttctgcaaaaatgaaactattagtattccaccatattgcaattaatat--cacttgagctaa---tgt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590150 127 + 86207423 aatatcattgaatagc----tgtaggatagtggcaaggatgtcagt--------------------------------------atctgtaaa--actcga-ttttctcttctccaaaagtgaaactattagtattccaccatattgcaattaatat--cacttgagctaa---tgt i nomLeu3.chr21 I 1 C 0 s rheMac8.chr2 66071122 131 + 204787373 AATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAGC--------------------------------------ATCTGTAAC--ATTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCATATTGCAATTAGTAT--CACTTGAGCGAA---TGT i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61002970 131 - 192460366 AATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAGC--------------------------------------ATCTGTAAC--ATTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCATATTGCAATTAGTAT--CACTTGAGCGAA---TGT i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11114911 131 - 17224310 AATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAGC--------------------------------------ATCTGTAAC--ATTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCTTATTGCAATTAGTAT--CACTTGAGCGAA---TGT i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17427111 131 - 41321030 AATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAGC--------------------------------------ATCTGTAAT--ATTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCATATTGCAATTAGTAT--CACTTGAGCGAA---TGT i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64498700 131 - 101219884 AATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAGC--------------------------------------ATCTGTAAC--ATTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCATATTGCAATTTGTAT--CACTTGAGCTAA---TGT i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 884552 131 - 924385 AATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAGC--------------------------------------ATCTGTAAC--ATTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCATATTGCAATTAGTAT--CACTTGAACGAA---TGT i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6725539 131 - 10587913 AACATCATTGAATAGCTAGTTGTAGGATAGTGGCAAGGATGTCAGC--------------------------------------ATCTGTAAC--GTTCTA-TTTTCTCTTCTCCAAAAATGAAACCATTAGTATTTCACCATATTGCAATTAGTAT--CACTTGAGCTAA---TGT i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46060634 128 - 98464013 AATATCATTGAATAGC----TGTAGGATAGTGGCAAGGATGTTAGC--------------------------------------ATCTGTAAC--AGTAAATTTTTCTCTTATCTAAAAGTGAAACTGTTAATATTCAACCATATTGCAATTAGTAT--CACTTGATCTAA---TGT i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27732251 127 + 27742158 aatatcactgaatagc----tgtaggatagtggcaaggacattagc--------------------------------------atctgtaac--agtcaa-ttttctcttatctaaaactgaaactattaatattcaaccacattgcaattagtat--cacttgatcaaa---tgt i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 269642 127 - 4835464 aatatcattgaatagc----tgtaggagagtggcaaggatgttagc--------------------------------------atctgtaac--agtcaa-ttttctcttatctaaaaGTGAAACTATTAGTATTCAACCATATTGCAATTAGTAT--CACTTGATCTAA---AGT i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3735630 126 + 4093027 AATATCATTGAATAGC----TGTAGGATAGTGGCAAGGATGTTAGC--------------------------------------ATCTGTAAC--AGTAAA-TTTTTTCTTATCTAAAAGTGAAACTATTAATATTCAACCATATTTC-ATTAGTAT--CATTTGATCTAA---TGT i aotNan1.NW_018502033v1 I 1 C 0 s otoGar3.GL873534 11072027 127 + 30473821 ATTATTGTTTAAGAGC----TGTTGGATAGTGACAAGGACATCGGC--------------------------------------ATTTGTAAC--ACACTA-TTTTCTCTT---TGAAAATGAAACTCTCCATCCCCCACCATACTGTGGTTAGTGG--GACATGAGCTGATGCTGC i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45780485 151 - 149736546 -----------GAAGC----TGTTAGAGAGGGACAGAGGTAGCAGCCACACACCACAAATACTTTCCTCTTTAATGATAGAAGTATCCTTAGC--ACACTA-TATTCATCACTT---GAATGAGTACATTGGAAT--GAATATATTGGAATATATATGCTACTGCTGCTAT---TGT i mm10.chr6 C 0 I 60 s canFam3.chr20 16606452 112 + 58134056 ------------TAAC----TGTGGAATAGTGGTAAGAACATCAGC--------------------------------------ATTTGTAACAAACTCAA-TTTTCTCTTCTTTAAAAATGAAACTATTA-TATTCCACCATATTG----TGGTAT--CACTTGAGCTAA---TAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852649 112 - 2187301 aatgtggtttaatagc----tgtgagataatggtaagtatgacagg--------------------------------------atttgttacacactcaa-ttttctctccttaaaaaaaaatac-----------------attgtggtcagtat--cacttaagctaa---tac i dasNov3.JH563077 I 1 C 0 e eulFla1.LGHW01000501v1 33926 489 + 635616 I e eulMac1.LGHX01000499v1 33724 489 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1622467 202 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=527210.000000 s hg38.chrUn_KI270749v1 116083 49 + 158759 ATACAAGCAGTATGAAATCCCACAGGATT---CACATGTAAAATATTGGA-TT---- s panTro5.chr3 202003320 49 - 202621043 atacaaGCAGTATGAAATCCCACAGGATT---CACATGTAAAATATTGGA-TT---- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771336 49 - 205426864 ATACAAGCAGTATGAAATCCCACAGGATT---CACATGTAAAATATTGGA-TT---- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1568 49 - 17846 atacaaGCAGTATGAAATCCCACAGGATT---CACATGTAAAATATTGGA-TT---- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590277 49 + 86207423 atacaagcagtttgaaaTCCCAAAAGATT---CACATGCAAAATATTGGA-TT---- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071253 49 + 204787373 ATATAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGA-TT---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003101 49 - 192460366 ATATAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGA-TT---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115042 49 - 17224310 ATACAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGA-TT---- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427242 49 - 41321030 ATACAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGA-TT---- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498831 50 - 101219884 ATACAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATACTGGATTT---- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884683 48 - 924385 ATAC-AGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGA-TT---- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725670 50 - 10587913 ATACAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGATTT---- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060762 49 - 98464013 ATACAAGCAGCTTGAAATCCAAAAGCATT---TACATGtaaaatattagt-at---- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732378 49 + 27742158 atacaagcagtttgaaatccaaaagcatc---cacatgtaaaatattagc-at---- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269769 49 - 4835464 ATACGAGCAGTTTGAAATCCAAAAGCATT---GACATGCAAAATATTAGC-AT---- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735756 49 + 4093027 ATACAAGCAGTTTGAAATCCAAAAGCATT---CACATGTAAAATATTAGT-AT---- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072154 52 + 30473821 ATATAAGCAGTTTTAAATTGGAAAACATTGCGGACATGCAAAACCCTGGA-GT---- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16606564 49 + 58134056 ATCTCAGTGGTTTGAAATTGGAAAACACG---CACACATAAAATACTGGT-AT---- i canFam3.chr20 C 0 I 4 s dasNov3.JH563077 1852761 56 - 2187301 acacaagtggtttgaaattggaaaacatcatgcacatgtaaaatattggt-attact i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33926 489 + 635616 I e eulMac1.LGHX01000499v1 33724 489 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e mm10.chr6 45780636 60 - 149736546 I e micMur3.chr32 1622467 202 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=197911.000000 s hg38.chrUn_KI270749v1 116132 17 + 158759 TTTTATAT--TTTAATATG s panTro5.chr3 202003369 17 - 202621043 TTTTATAT--TTTAATATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771385 17 - 205426864 TTTTATAT--TTTAATATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1617 17 - 17846 TTTTATAT--TTTAATATG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590326 17 + 86207423 TTTTATAT--TTTAATATG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071302 17 + 204787373 TTTTGTAT--TTTAATATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003150 17 - 192460366 TTTTGTAT--TTTAATATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115091 17 - 17224310 TTTTGTAT--TTTAATATG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427291 17 - 41321030 TTTTGTAT--TTTAATATG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498881 17 - 101219884 TTTTGTAT--TTTAATATG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884731 17 - 924385 TTTTGTAT--TTTAATATG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725720 17 - 10587913 TTTTGTAT--TTTAATATG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060811 17 - 98464013 ttttatat--tttaatttg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732427 17 + 27742158 ttttATAT--TTTAATTTG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269818 17 - 4835464 TTTTATAT--TTTAATTTG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735805 17 + 4093027 TTATGTAT--TTTAATTTG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072206 19 + 30473821 TTTTGTATAGTTTAAGATT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45780696 17 - 149736546 TTTCACAG--TTTAACATT i mm10.chr6 I 60 C 0 s canFam3.chr20 16606617 17 + 58134056 TTTTATAG--ATTTAGACC i canFam3.chr20 I 4 C 0 s dasNov3.JH563077 1852817 17 - 2187301 CTCTATAG--TTTAAAACC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33926 489 + 635616 I e eulMac1.LGHX01000499v1 33724 489 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e micMur3.chr32 1622467 202 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=2084238.000000 s hg38.chrUn_KI270749v1 116149 158 + 158759 TAAAATGTAAGTTGTTTCTTTTCTCTCTGATACGAAATGCAGTTTTCATTCCACAGTTTCACTCTCATACACTTAATAACTTTTGTTAACGTAACAATACAG--TGTGAGAGTTCCTGGGGCTATGCCTGACCCAAAGCAGACACTT-AGTAAAATGTCTG s panTro5.chr3 202003386 158 - 202621043 TAAAATGTAAGTTGTTTCTTTTCTCTCTGATACGAAATGCAGTTTTCATTCCACAGTTTCACTCTCATACACTTAATAACTTTTGTTAACGTAACAGTACAG--TGTGAGAGTTCCTGGGGCTATGCCTGACCCAAAGCAGACACTT-AGTAAAATGTCTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771402 158 - 205426864 TAAAATGTAAGTTGTTTCTTTTCTCTCTGATACGAAATGCAGTTTTCATTCCACAGTTTCACTCTCATACACTTAATAACTTTTGTTAACGTAACAGTACAG--TGTGAGAGTTCCTGGGGCTATGCCTGACCCAAAGCAGACACTT-AGTAAAATGTCTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1634 158 - 17846 TAAAATGTAAGTTGTTTCTTTTCTCTCTGATACGAAATGCAGTTTTCATTCCACAGTTTCACTCTCATACACTTAATAACTTTTGTTAACGTAATAATACAG--TGTCAGAGTTCCTGGGGCTATGCCTGACCCAAAGCAGACACTT-AGTAAAATGTCTG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590343 154 + 86207423 TAAAATGTAAGTTGTTTCTTT----TCTGATACAAAATGCAGTTTTCATTCCACAGTTTCACTCTCATATACTTAATAACTTTTGTTAACATAACAATACAG--TGTGAGTGTTCCTGGTGCTATGCCTGACCCAAAGCAGACACTT-AGTAAAATGTCTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071319 158 + 204787373 TAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATGCAGTTTTCATTCCACAATTTCACTCTTAGGTACTTAATAAGTTTTGTTAACATTACAATACAG--TGTGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACACACTC-ACTAAAATGTCTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003167 158 - 192460366 TAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATGCAGTTTTCATTCCACAATTTCACTCTTAGGTACTTAATAAGTTTTGTTAACATAACAATACAG--TGTGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACACACTC-ACTAAAATGTCTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115108 158 - 17224310 TAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATGCAGTTTTCATTCCACAATTTCACTCTTAGGTACTTAATAAGTTTTGTTAACATAACAATACAG--TGTGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACACACTC-ACTAAAATGTCTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427308 158 - 41321030 TAAAACGTAAGTTGTTTCTTTTCTCTCTGATACAAAATCCAGTTTTCATTCCACAATTTCACTCTTATGTACTTAATAAGTTTTGTTAACATAACAATACAG--TGCGAGAGTTTCTGGTGCTATGCCTGACCCAAAGCACACACTC-ACTAAAATGTCTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498898 158 - 101219884 TAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATGCAGTTTTCAATCCACAATTTCACTCTTATGTACTTAATAAGTTTTGTTAACATAACAATACAG--TGTGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACACACTC-ACTAAAATGTCTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884748 158 - 924385 TAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATACAGTTTTCATTCCACAATTTCATTCTTATGTACTTAATAAGTTTTGTTAACATAACAATACAG--TGCGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACATACTC-ACTAAAATGTCTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725737 158 - 10587913 TAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATGCAGTTTTCATTCCACAATTTCACTCTTATATACTTAATAAGTTTTGTTAACATAACAATACAG--TGTGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACACACTC-ACTAAAATGTCTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060828 156 - 98464013 taaaatataaGTTGTTTCTTTTCTCTCTGATACAAAGTGCAGTTTTCATTCCACAGTTTCACTCTCATATACTTAATAAGTTTTGTTAACAAAACAATGCAG--TGTGAGAGTTCCTGGCACTATGCCTGACCCAAAGCAGACACTT-ACTAAAATGTC-- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732444 155 + 27742158 TAAAACATAAGTTGTTTCTTTTCTCTCTGATGCAAAGTGCAGTTTTCATTCCACAGTTTCACTCTCATATACTTAATAAGTTTTGTTAACATAACAATGCAG--TGTGAGAGTTCCTGGCGCTATGCCTGACCCAAAGCAGACACT----TAAAATGTCTG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269835 158 - 4835464 TAAAATATAAGTTGTTTCTTTTCTCTCTGATACAAAGTGCAGTTTTCATTCCACAGTTTCACTCTCATATACTTAATAAGTTTTGTTAACATAACAATGCAG--TGTGAGAGCTCCTGGCACTATGCCTGACCCAAAGCAGACACTT-ACTAAAATGTCTG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735822 158 + 4093027 TAAAGTATAAGTCGTTTCTTTTCTCTCTGATATGAAGTGCAGTTTTCATTCCACAGTTTCACTCTCATATACTTAATAAGTTTTGTTAACATAGCAATGCAG--TGTGAGAGTTCCTGGCATTATGCCTGACCCAAAGCAGACACTT-ACTAAAATGTCTG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1622669 158 - 9149476 TAAAATACAAGTTGTTTCTTCTCC-TCTGATATAAAGTACAGCTTTCATTTCATAGTGTCACTCTCATATACTTAATAAGTTTTATTAACATAACAATGCAC--TGCCACGGTCCCTGGCACTGCGCCTGACCCAAAGCAGACACTCAACTAAAATATCCA i micMur3.chr32 I 202 C 0 s otoGar3.GL873534 11072225 156 + 30473821 TAGAATACAAATTGCTAATTCTCC----GATAGAAAGTGTGGCTTTCATTTTACTGTCTCACTCTCATCTACTTGATGAGTTTTATTAACATAACAACAGACGTTGGGACAGTTCCTGGCACTGGGCCTAACCCCAAACAGACAATC-ACTAAAATGCCCA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45780713 154 - 149736546 TCAAACACAAGGTGTTTGGTCTCCCCATAATAGTGAGT--AGTGTGGCTGCTTGAGTTGCTCTCTCAAAAGCATCCTGATTTT--CCAGCCTGACAATGCAT--TGTAAAAGTTATGGGCATCGTGCTTTATCCAGAAAAGTGTCTC-CCTAAAGTGAGTA i mm10.chr6 C 0 C 0 s canFam3.chr20 16606634 157 + 58134056 TAAAATAGGAGTTGTTTCTTCTTCCTCTGATATAAAAAGTGGCTCACATTTCAAAGTTTCACTTCCATGTACTTAATAAGTTTTGCTAACAAAACAAT-CAT--AGTAAAGGTTCCTAGTAGTATGTCTGACTCAAAACAGATGCTC-CTTAAAATGTCTG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852834 123 - 2187301 TAAAATGTGAGTTGTTTGTTCTCC--------------------------------TCTCATTCTCACTCACATAATAATTTTTATTTACAAAAAaatgca---tgtgaaagctcttggtaccaagcctgaaccaaagtaggcatgc-attaaaACGCT-- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33926 489 + 635616 I e eulMac1.LGHX01000499v1 33724 489 + 631505 I e proCoq1.NW_012148064v1 601615 13364 + 2414909 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=171821.000000 s hg38.chrUn_KI270749v1 116307 12 + 158759 TGGAACCTAAAT---- s panTro5.chr3 202003544 12 - 202621043 TGGAACCTAAAT---- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771560 12 - 205426864 TGGAACCTAAAT---- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1792 12 - 17846 TGGAACCTAAAT---- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590497 12 + 86207423 TCGAACCTAAAT---- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071477 12 + 204787373 TCGAACCTAAAT---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003325 12 - 192460366 TCGAACCTAAAT---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115266 12 - 17224310 TCGAACCTAAAT---- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427466 12 - 41321030 TCGAACCTAAAT---- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499056 12 - 101219884 TCGAACCTAAAT---- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884906 12 - 924385 TCGAACCTAAAT---- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725895 12 - 10587913 TCGAACCTAAAT---- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060984 9 - 98464013 ---AAGCTAAAT---- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732599 12 + 27742158 TCGAACCTAAAG---- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269993 12 - 4835464 TCAAACCTTAAT---- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735980 12 + 4093027 TCGAACCTAAAT---- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1622827 12 - 9149476 TTGAACCTAAAT---- i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 614979 12 + 2414909 TGGAACCTAAAT---- i proCoq1.NW_012148064v1 I 13364 C 0 s otoGar3.GL873534 11072381 12 + 30473821 TTGAATCTCAAT---- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45780867 12 - 149736546 CAGAAGCTGagt---- i mm10.chr6 C 0 I 404 s canFam3.chr20 16606791 12 + 58134056 TTGAGCCTAAAT---- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852957 14 - 2187301 --GAACCTAAAAGCAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33926 489 + 635616 I e eulMac1.LGHX01000499v1 33724 489 + 631505 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=890208.000000 s hg38.chrUn_KI270749v1 116319 64 + 158759 TTATTTTAAGATACAATTGGAATCT---AAACTAAACGAGTTTTCAAATTCAGAATCAGGCATATTT s panTro5.chr3 202003556 64 - 202621043 TTATTTTAGGATACAATTGGAATCT---AAACTAAAAGAGTTTTCAAATTCAGAATCAGGCATATTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771572 64 - 205426864 TTATTTTGGGATACAATTGGAATCT---AAACTAAAAGAGTTTTCAAATTCAGAATCAGGCATATTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1804 64 - 17846 TTATTTTAGGATACAATTGGAATCT---AAACTAAAAGAGTTTTCAAATTCAGAATCAGGCATATTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590509 64 + 86207423 TTATTTTAGGATATAACTGGAATCT---AAACTAAAAGAGCTTTCAAATTTAGAATCAGGCATATTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071489 63 + 204787373 TTATTTTAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTAAAATT-ATAATCAGGCGTATTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003337 63 - 192460366 TTATTTTAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTAAAATT-ATAATCAGGCGTATTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115278 63 - 17224310 TTATTTTAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTAAAATT-ATAATCAGGCGTATTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427478 63 - 41321030 TTATTTAAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTAAAATT-ATAATCAGGCATATTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499068 63 - 101219884 TTATTTTAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTGAAATT-ATAATCAGGCATATTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884918 63 - 924385 TTATTTTAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTAAAATT-ATAATCAGGCATATTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725907 63 - 10587913 TTATTTTAAGATACAATTGGAAACT---ACAGTAAAATAGTTTTTAAATT-ATAATCAGCCAAATTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060993 64 - 98464013 TTATTTTAGGATACAACTGGAATCT---AAAATAGAAGAGTTTTGAAATTTAAAATCAGGCATATTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732611 64 + 27742158 TTATTTTAGAATACAATTGAAACCT---AAATTAAAAGAGTTGTTAAATTTAGAATCAGGCATATTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270005 64 - 4835464 TTATTTTAGGATACAATTGGAATCT---AAAATAAAAGAGTTTTTAAATTTAGAATCAGGCATATTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735992 64 + 4093027 TTATTTTAGGATACAATTGGAATCT---AAAATAAAAGAGTTTTTAAATTTAGAATGAGGCATATTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1622839 67 - 9149476 CTATTTTGAGATACAATTGAAATCTTCTAAAATAAAAGAGTTTTTAAATTTAGAATCAGGCATGTTT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 614991 67 + 2414909 CTATTTTAGGATACAATTGAAATCTTCTAAAATAAAAGAGTTTTTAAATTTACAATCAGGCATATTT i proCoq1.NW_012148064v1 C 0 I 7631 s otoGar3.GL873534 11072393 67 + 30473821 CTATTTTAGGATACAATTGAAATCTTCCAAAGTGAAAGAGTTTTTAAATTTAGAATCAGGCATATTG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16606803 67 + 58134056 TTGTTTTAAAATATAATTGGAATCTTCTGAAATAAGAGCGTTTTAAAAATTAGAATCAGGCATATTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852971 67 - 2187301 CTATTTTAGGACATAACTGGAATCTTCTTAAATAAAAGAGTATTTAATATTAGAATTAGTCATATTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33926 489 + 635616 I e eulMac1.LGHX01000499v1 33724 489 + 631505 I e mm10.chr6 45780879 404 - 149736546 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=19000.000000 s hg38.chrUn_KI270749v1 116383 1 + 158759 G s panTro5.chr3 202003620 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771636 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1868 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590573 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071552 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003400 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115341 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427541 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499131 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884981 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725970 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061057 1 - 98464013 G i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732675 1 + 27742158 G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270069 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736056 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1622906 1 - 9149476 G i micMur3.chr32 C 0 I 2717 s otoGar3.GL873534 11072460 1 + 30473821 G i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16606870 1 + 58134056 G i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1853038 1 - 2187301 G i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33926 489 + 635616 I e eulMac1.LGHX01000499v1 33724 489 + 631505 I e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e mm10.chr6 45780879 404 - 149736546 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=271229.000000 s hg38.chrUn_KI270749v1 116384 21 + 158759 CTGCAAAGCATTATGGGTCTC s panTro5.chr3 202003621 21 - 202621043 CTGCAAAGCATTATGGGTCTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771637 21 - 205426864 CTGCAAAGCATTATGGGTCTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1869 21 - 17846 CTGCAAAGCTTTATGGGTCTC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590574 21 + 86207423 CTGCAAAGAATTATGGGTCTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071553 21 + 204787373 CTGCAAAGAATTATGAGTCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003401 21 - 192460366 CTGCAAAGAATTATGAGTCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115342 21 - 17224310 CTGCAAAGAATTATGAGTCTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427542 21 - 41321030 CTGCAAAGAATTATGGGTCTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499132 21 - 101219884 CTGCAAAGAATTATGGGTCTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884982 21 - 924385 CTGCAAAGAATTATGGGTCTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725971 21 - 10587913 CTACAAAGAATTATGGGTCTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061058 21 - 98464013 CTGCAAAGAATTATGGGTCTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732676 21 + 27742158 CTGCAAAGAATTATGGGTCTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270070 21 - 4835464 CTGCAAAGAATTATGGGTCTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736057 21 + 4093027 CTGCAAAGAATTATGGGTCTC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072461 16 + 30473821 CGGCAAAGAATTATTT----- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16606871 21 + 58134056 CTGCAAAGAGTTATGAATATC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1853039 21 - 2187301 CTACAAAGAATTATGGTTCTC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 33926 489 + 635616 I e eulMac1.LGHX01000499v1 33724 489 + 631505 I e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e mm10.chr6 45780879 404 - 149736546 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=87039.000000 s hg38.chrUn_KI270749v1 116405 5 + 158759 ATTTC s panTro5.chr3 202003642 5 - 202621043 ATTTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771658 5 - 205426864 ATTTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1890 5 - 17846 ATTTC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590595 5 + 86207423 ATTTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071574 5 + 204787373 ATTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003422 5 - 192460366 ATTTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115363 5 - 17224310 ATTTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427563 5 - 41321030 ATTTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499153 5 - 101219884 ATTTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885003 5 - 924385 ATTTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725992 5 - 10587913 ATTTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061079 5 - 98464013 ATTTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732697 5 + 27742158 ATTTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270091 5 - 4835464 ATTTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736078 5 + 4093027 ATTTC i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 34213 5 + 631505 CTTTC i eulMac1.LGHX01000499v1 I 489 I 7920 s eulFla1.LGHW01000501v1 34415 5 + 635616 CTTTC i eulFla1.LGHW01000501v1 I 489 I 7924 s otoGar3.GL873534 11072477 5 + 30473821 ATTTC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16606892 5 + 58134056 ATTTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1853060 5 - 2187301 ATTTC i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e mm10.chr6 45780879 404 - 149736546 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=1697894.000000 s hg38.chrUn_KI270749v1 116410 144 + 158759 CATTTCCA---AATCCACCAA-GTCCATCCTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGTGAAACAGAAGTTAAATCTG--CTCTTTCATAACCCAGAGACATT-AATTACAATGGAATAGCATGATAAACACC-GTGAAC s panTro5.chr3 202003647 144 - 202621043 CATTTCCA---AATCGGCCAA-GTCCATCCTTTCACGCATCATGTTACTCAGGGATAAA-GCACATCTAAGTGAAACAGAAGTTAAATCTG--CTCTTTCATAACCCAGAGACATT-AATTACAATGGAATAGCATGATAAACACC-GTGAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771663 144 - 205426864 CATTTCCA---AATCGGCCAA-GTCCATCCTTTCACGCATCATGTTACTCAGGGATAAA-GCACATCTAAGTGAAACAGAAGTTAAATCTG--CTCTTTCATAACCCAGAGACATT-AATTACAATGGAATAGCATGATAAACACC-GTGAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1895 144 - 17846 CATTTCCA---AATCCACCAA-GTCCATCCTTTCACGCATCATGTTACTCAGGGATAAA-GCACATCTAAGTGAAACAGAAGTTAAATCTG--CTCTTTCATAACCCAGAGACATT-AATTACAATGTAATAGCATGATAAACACC-GTGAAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590600 146 + 86207423 CATTTCCA---AATCCACCAA-GTCGATCCTTTCACGCATCATGTTACTCAGGGATAAA-GCACATCTAAGTGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAATGGAATAGCATGATAAACACC-ATGAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071579 146 + 204787373 CATTTCCA---AATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAGCGGAATAGCATGGTAAACACC-ATAAAC i rheMac8.chr2 C 0 I 23 s macFas5.chr2 61003427 146 - 192460366 CATTTCCA---AATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAGCGGAATAGCATGGTAAACACC-ATAAAC i macFas5.chr2 C 0 I 6 s macNem1.NW_012018021v1 11115368 146 - 17224310 CATTTCCA---AATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAGCGGAATAGCATGGTAAACACC-ATAAAC i macNem1.NW_012018021v1 C 0 I 23 s cerAty1.NW_012009469v1 17427568 146 - 41321030 CATTTCCA---AATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAACGGAATAGCATGGTAAACACC-ATAAAC i cerAty1.NW_012009469v1 C 0 I 23 s chlSab2.chr22 64499158 146 - 101219884 CATTTCCA---AATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-CATTACAATGGAATAGCATGGTAAACACC-ATGAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885008 146 - 924385 CATTTCCA---AATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAACGGAATAGCATGGTAAACACC-ATAAAC i manLeu1.NW_012098965v1 C 0 I 23 s colAng1.NW_012114711v1 6725997 147 - 10587913 CATTTCCA---AATCCATCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATGTAAGAGAAACAGAAGTTAAATCTGCTGTCTTTCATAACCCAGAGACATTAAATTACAATGGAATAGCATGGTAAACACC-ATGAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061084 146 - 98464013 CATTTCCA---AATCCACCAA-GTCAATCTCTTCACATGTCATGGTACTCAGGGATAAA-GCACATTTAAGTGAAACAG-AGATAAATCTGCTTTCTTTCATAACTCAGAGACATT-AATTACAATGGAATAGCATGATAAACACCCATGAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732702 146 + 27742158 CATTTCCA---AATCCGCCAA-GTCAATCTCTTCACGTGTCATGCTACTCAGGGATAAA-GCACATTTAAGTGAAACAG-AGATAAATCTGCTCTCTTTCATAACTCAGAGACGTT-AATTACAATGGAATAGCATGATAAACACCCATGAAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270096 146 - 4835464 CATTTCCA---AATCCGCCAA-GTCAATCTCTTCACATGTCATGCTACTCAGGGATAAA-GCACATTTAAGTGAAACAG-AGATAAATCTGCTCTCTTTCGTAACTCAGAGACATT-AATTACAATGGAATAGCATGATAAACACCCATGAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736083 146 + 4093027 CATTTCCA---AATCCACCAT-GTCAATCTTTTCACATGTCATGCTACTCAGGGATAAA-GCACATTTAAGTGAAACAG-AGATAAATATGCTCTCTTTCATAACTCAGAGATGTT-AATTACAATGGAATAGCATGCTAAACACCTATGAAC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072482 144 + 30473821 -----CCAGTCAATCAACCAACATCTATCTTTTCAAGTGTCGTGGTGTGCAGGAAGAAAGGCACATCTAAATAAAACAGAAAATAAATCTGCGGTCTTACAGGATCCAGTAA-ATT-GATTATAAAAGAATAGTAAGATAAATACC-ATGAA- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16606897 141 + 58134056 CAAAT--A---AATCAGCCAA--TATATCTTTTCAAAGGTTGTGTTACTCAGGGACAAA-GCACACCTAAATGAAACA--AGATAAATATGCTCTCTTTTAGAACCCAGAGAAATT-AATTATAGTGGATTGTCATGATAAAGACC-ATGAAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1853065 143 - 2187301 CAAAT--A---AATTGACCAA-ATCTATCTTTTCAAAGATGATGTTATACAGGGATAAA-GCATACCTAAATGACATAGAAGATAAATGTGCTCTCTTT-AGACCCCAGAGAAATT-AATTACAATGGAATAGTGTAATAAAGACG-ATGAGC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 34420 7924 + 635616 I e eulMac1.LGHX01000499v1 34218 7920 + 631505 I e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e mm10.chr6 45780879 404 - 149736546 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=12121.000000 s hg38.chrUn_KI270749v1 116554 6 + 158759 GATAT-G s panTro5.chr3 202003791 6 - 202621043 GATAT-G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771807 6 - 205426864 GATAC-G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2039 6 - 17846 GATAT-G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590746 6 + 86207423 GATAC-A i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 61003579 6 - 192460366 AGCATG- i macFas5.chr2 I 6 I 11 s chlSab2.chr22 64499304 5 - 101219884 AAAAT-- i chlSab2.chr22 C 0 C 0 s colAng1.NW_012114711v1 6726144 5 - 10587913 AATAT-- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061230 6 - 98464013 AATAT-G i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732848 6 + 27742158 AATAT-G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270242 6 - 4835464 AATAT-G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736229 6 + 4093027 AGTAT-G i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072626 6 + 30473821 AATAT-G i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16607038 6 + 58134056 AGTAC-G i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1853208 6 - 2187301 AATAT-G i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 34420 7924 + 635616 I e eulMac1.LGHX01000499v1 34218 7920 + 631505 I e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e mm10.chr6 45780879 404 - 149736546 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I e manLeu1.NW_012098965v1 885154 23 - 924385 I e macNem1.NW_012018021v1 11115514 23 - 17224310 I e rheMac8.chr2 66071725 23 + 204787373 I e cerAty1.NW_012009469v1 17427714 23 - 41321030 I a score=176455.000000 s hg38.chrUn_KI270749v1 116560 17 + 158759 GAGATTAATAG-----AAAAAA s panTro5.chr3 202003797 16 - 202621043 GAGATTAATAG------AAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771813 16 - 205426864 GAGATTAATAG------AAAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2045 17 - 17846 GAGATTAATAG-----AAAAAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590752 18 + 86207423 GAGATTAATAG----AAAAAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071748 18 + 204787373 GAGATTAATAG----AAAAAAA i rheMac8.chr2 I 23 C 0 s macFas5.chr2 61003596 18 - 192460366 GAGATTAATAG----AAAAAAA i macFas5.chr2 I 11 C 0 s macNem1.NW_012018021v1 11115537 18 - 17224310 GAGATTAATAG----AAAAAAA i macNem1.NW_012018021v1 I 23 C 0 s cerAty1.NW_012009469v1 17427737 18 - 41321030 GAGATTAATAG----AAAAAAA i cerAty1.NW_012009469v1 I 23 C 0 s chlSab2.chr22 64499309 18 - 101219884 GAGATTAATAG----AAAAAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885177 18 - 924385 GAGATTAATAG----AAAAAAA i manLeu1.NW_012098965v1 I 23 C 0 s colAng1.NW_012114711v1 6726149 17 - 10587913 GACATTAATAG-----AAAAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061236 17 - 98464013 GAGATTAATGG-----GAAAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732854 17 + 27742158 GAGATTAATGG-----GAAAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270248 17 - 4835464 GAGATTAATGG-----GAAAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736235 17 + 4093027 GAGATTAATGG-----AAAAAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072632 18 + 30473821 GCGATTAATAG----AAAATAA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16607044 18 + 58134056 GAGCTTAATAG----AAAAAAA i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1853214 22 - 2187301 GAGataaatttttttaaaaata i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 34420 7924 + 635616 I e eulMac1.LGHX01000499v1 34218 7920 + 631505 I e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e mm10.chr6 45780879 404 - 149736546 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=17290.000000 s hg38.chrUn_KI270749v1 116577 1 + 158759 T s panTro5.chr3 202003813 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771829 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2062 1 - 17846 T i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590770 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071766 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003614 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115555 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427755 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499327 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885195 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726166 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061253 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732871 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270265 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736252 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 42138 1 + 631505 T i eulMac1.LGHX01000499v1 I 7920 I 744 s eulFla1.LGHW01000501v1 42344 1 + 635616 T i eulFla1.LGHW01000501v1 I 7924 I 744 s otoGar3.GL873534 11072650 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1853236 1 - 2187301 t i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e mm10.chr6 45780879 404 - 149736546 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I e canFam3.chr20 16607062 2 + 58134056 I a score=1216332.000000 s hg38.chrUn_KI270749v1 116578 101 + 158759 ATGAA----AAGAAAATGACAGTAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAATATGGGAGGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTAAAATAAAAC s panTro5.chr3 202003814 101 - 202621043 ATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAATAAGGGAGGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATGAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771830 101 - 205426864 ATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAATAAGGGAGGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATGAAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2063 101 - 17846 ATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAATAAGGGAGGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTAAAATAAAAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590771 100 + 86207423 ATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGG-TGGGTGGAAATAAGGGAGGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071767 101 + 204787373 ATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAGCAAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003615 101 - 192460366 ATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAGCAAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115556 101 - 17224310 ATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAGCAAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427756 101 - 41321030 AAGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAGCAAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499328 101 - 101219884 ATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAACCAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACCGAAATAAAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885196 101 - 924385 ATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAGCAAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726167 101 - 10587913 ATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAACAAGGGAAGTTG-GCTTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061254 98 - 98464013 ATGGG----AGGAAAA----AGCAGCTTAGGAAGAAAC-CAAAAGGATGGGTTGAAATAAGGGAAGTTA-GCCTTCAATGAGCAAGTAAAGTAGAACTGAAATAAAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732872 101 + 27742158 GTGGG----AGGAAAATGACAGCAGC-CAGGAAGAAAC-AAAAAGGATGGGTTGAAATAAGGGAAGTTG-GCCTCCAAAGAGCAAGTGAAGTAGAACTGAAATAAAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270266 101 - 4835464 ACGGG----AGGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTTGAAATAAGGGAAGTTG-GCCTCCAAAGAGCAAGTAAAGTAGAACTGAAATAAAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736253 101 + 4093027 ATGGG----AGGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTTGAAATAAGGGAAGTTG-GCCTCCAAAGAGCAAGTGGAGTAGAACTGAAATAAAAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072651 104 + 30473821 ATGGGCTCTAGGGGAGTTGAAGCAGC-TACAAATAAGT--AAGAGAATGGCTGGAAACAAGGGAAGTTG-TACCCCAAATGTCAAGTAAATTACAACTGCAATAAAAG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16607064 100 + 58134056 ATGAG----AATGAAATAGCAGAAGC-CTGGAAGAAGCCAAAAAGGACGGATAGGAAGAAAGAAAGT---ATCTGCAAAGGTCAAGTAAAGTAGAATTGGAATAAAAC i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1853237 100 - 2187301 ttGGG----AGAAAACTGACAGTAGC-TAGGAAGAAGC-CAAAGGGAT-GCCAGGAACAAGGAAAACTGTAACTCAAAAGGTCAAGTAAAATAGAACTGAAAAAAAT- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e mm10.chr6 45780879 404 - 149736546 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=1290587.000000 s hg38.chrUn_KI270749v1 116679 119 + 158759 CTGGT--GATTTTGATCTGCATGTGTAATTAATAT-------AGTTTCTGGTGGGGGGTGATGGGAGAAATGGGGATAAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTGTGAAGG--CAACAC s panTro5.chr3 202003915 119 - 202621043 CTGGT--GATTTTGATCTGCGTGTGTAATTAATAT-------AGTTTCTGGTCGGGGGTGATGGGAGAAATGGGGATAAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTGTGAAGG--CAACAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771931 119 - 205426864 CTGGT--GATTTTGATCTGCGTGTGTAATTAATAT-------AGTTTCTGGTCGGGGGTGATGGGAGTAATGGGGATAAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTGTGATGG--CAACAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2164 119 - 17846 CTGGT--GATTTTGATCTGCATGTGTAATTAATAT-------AGTTTCTGGTGGGGGGTGATGGGAGAAATGGGGATAAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTGTGAAGG--CAACAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590871 118 + 86207423 CTGGT--GATTTTGATCTGTGTGTGTAATTAATAT-------AGTTTCTGATGGAGGGTGATGGGAGAAATGGGGATAAAGAAAAGCCCT--------GAGTAGCAACCTTCTTG-CT-GAATTGTGAAGG--CAACAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071868 119 + 204787373 CTGGT--GATTTTAATATATGTGTGTAATTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAGAAATGGGGATGAAGAAAAGCCCT--------GAGTAGGAACCTTCTTGCCT-GAATTATGAAGG--CAACAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003716 119 - 192460366 CTGGT--GATTTTAATATATGTGTGTAATTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAGAAATGGGGATGAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAACAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115657 119 - 17224310 CTGGT--GATTTTAATATATGTGTGTAACTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAGAAATGGGGATGAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAACAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427857 119 - 41321030 CTGGT--AATTTTAATATATGTGTGTAATTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAGAAATGGGGATGAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAGCAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499429 119 - 101219884 CCGGT--GATTTTAATATATGTGTGTAATTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAGAAATGGGGATGAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAACAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885297 119 - 924385 CTGGT--GATTTTAATGTATGTGTGTAATTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAAAAATGGGGATGAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAACAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726268 119 - 10587913 CTGGT--GATTTTAATATATGTGTGTAATTAATGT-------AGTTTCTGGTGGAGGGTGATGGAAGAAACGGGGATGAAGAAAATCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAACAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061352 119 - 98464013 CTGGC--AGTTTTAATCTGTGGGCGTAATTAATAC-------AGTTTCTGGTGAGGGGTGATGGGAGAAATGGTGATAAAGAACATCACT--------GAGTAGCAACCTTCTTGCCT-AAAGTGTAAAGG--CAACAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732973 119 + 27742158 CTGGC--AGTTTTAATCTGTGTGTGTAATTAATAT-------AGTTTCTGGTGAGGGGTGATGGCAGAAATGGGGATAAAGAACAGCCTT--------GAATAGCAACCTTCTTGCCT-AAATGGTAAAGG--CAACAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270367 119 - 4835464 CTGGC--AGTTTTAATCTGTGTGCGTAATTAATAT-------AGTTTCTGGCGAGGGGTGATGGGAGAAATGGGGATAAAGAACAGCCTA--------GAGTAGCAACTTTCTTGCCT-AAATTGTAAAGG--CAACAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736354 119 + 4093027 CTGGC--AGTTTTAATCTATGTGCATAATTAATAT-------AGTTTCTGGTGAGGGGTGATGGGAGAAATGGGGATAAAGAACAGCCCT--------GAGTAGCAACCTTCTTACCT-AAATTGTAAAGG--CAACAC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072755 116 + 30473821 CTGGT--GATTTTAGTTGATGTGAGTCACGAATATA---GTGAGTCTCCGGCAAGA-ATGATGG------TCGAGGTGAAACACAGCACC--------GTGTAGCAACCCCCTGGGCT-GAACTGTTAGGG--TAACAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45781283 100 - 149736546 CTGGT--AGTTT--------GTATACAATTAAAATATTCATGAATTTCTGTCAAGATGTGATGACAGA---GGAGATGACGTAAAAC----------------ACAACCT-------T-GAATTGTAAATA--CAGCAA i mm10.chr6 I 404 I 4 s canFam3.chr20 16607164 116 + 58134056 TTGGT--GATCTTAATCAACATGTATAACTAATAG---AGCAAGTTTCCAGGGGGATATATTGGAGGA---GTAGATAGAGCATAGCCC------------TATCAATCTTCTTGCCC-AAATTGTACAAG--GAACAT i canFam3.chr20 C 0 I 4 s dasNov3.JH563077 1853337 126 - 2187301 CTAGTGAGATTTTAACCAATGTGTATAACTAATAT---AGCTAGTTTCAGGTGGGGGG----------AAGAGCAATATAGCACAGCCCTTTTGCCCGGAGAAGAAAACTTTTGGTCTAAAAGTATAAGTGGTGAGCAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 182580 943 + 958716 I a score=38924.000000 s hg38.chrUn_KI270749v1 116798 3 + 158759 GAA s panTro5.chr3 202004034 3 - 202621043 GAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772050 3 - 205426864 GAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2283 3 - 17846 GAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590989 3 + 86207423 GAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071987 3 + 204787373 GAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003835 3 - 192460366 GAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115776 3 - 17224310 GAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427976 3 - 41321030 GAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499548 3 - 101219884 GAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885416 3 - 924385 GAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726387 3 - 10587913 GAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061471 3 - 98464013 AAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733092 3 + 27742158 AAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270486 3 - 4835464 AAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736473 3 + 4093027 ACA i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 183523 3 + 958716 GAA i tarSyr2.KE939134v1 I 943 I 318 s otoGar3.GL873534 11072871 2 + 30473821 -CA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45781387 3 - 149736546 AAA i mm10.chr6 I 4 C 0 s canFam3.chr20 16607284 3 + 58134056 GAA i canFam3.chr20 I 4 C 0 s dasNov3.JH563077 1853463 3 - 2187301 GAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I a score=17290.000000 s hg38.chrUn_KI270749v1 116801 1 + 158759 T s panTro5.chr3 202004037 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772053 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2286 1 - 17846 T i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590992 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071990 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003838 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115779 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427979 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499551 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885419 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726390 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061474 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733095 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270489 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736476 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 183844 1 + 958716 T i tarSyr2.KE939134v1 I 318 I 334 s mm10.chr6 45781390 1 - 149736546 T i mm10.chr6 C 0 C 0 s canFam3.chr20 16607287 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1853466 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e otoGar3.GL873534 11072873 0 + 30473821 C a score=1390183.000000 s hg38.chrUn_KI270749v1 116802 127 + 158759 ACACAGATCACATCTTGGG--AAAAATAAATGTGACCC-CTTAAAATTTGCACCATATTATTGAAATCTCTTTGACACAAGTAACC------AT--------AG------AAGACACAGGTAACATATGGGTTGCTCTTTA--TGTAGGGCT s panTro5.chr3 202004038 127 - 202621043 ACACAGATCACGTCTTGGG--AAAAATAAATGTGACCC-CTTAAAATTTGCACCATATTATTGAACTCTCTTTGACACGAGTAACC------AT--------AG------AAGACACAGGTAACACATGGGTTGCTCTTTA--TGTAGGGCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772054 127 - 205426864 ACACAGATCACGTCTTGGG--AAAAATAAATGTGACCC-CTTAAAATTTGCACCATATTATTGAAATCTCTTTGACACGAGTAACC------AT--------AG------AAGACACAGGTAACACATGGGTTGCTCTTTA--TGTAGGGCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2287 127 - 17846 ACACAGATTAGGTCTTGGG--AAAAATAAATGTGACCC-CTTAAAATTTGCACCATATTATTGAAATCTCTTTGACACGAGTAACC------AT--------AG------AAGACACAGGTAACATATGGGTTGCTCTTTA--TGTAGGGCT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590993 126 + 86207423 ACATAGATCG-GTCTTGGG--AAAAATAAATGTGACCC-CTTAAAATTTGCGCCATATTATTGAAATCTCTTTGATGTGAGTAACC------AT--------AA------AAGACACAGGTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071991 127 + 204787373 ACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTGGACGTGAGTAACC------AT--------AG------AAGACACAGGTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003839 127 - 192460366 ACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTGGACGTGAGTAACC------AT--------AG------AAGACACAGGTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115780 127 - 17224310 ACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTTGACGTGAGTAACC------AT--------AG------AAGACACAGGTGACATCCGGGTTGCTCTTTA--TGTAGGGCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427980 127 - 41321030 ACAAAGATCAGGTATTGGG--AAAAATAAACGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTTGACGTGAGTAACC------AT--------AG------AAGACACAGGTAACATCCGGGTTGCTCTTTA--CGTAGGGCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499552 127 - 101219884 ACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTTGACATGAGTAACC------AC--------AG------AAGACACAGGTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885420 127 - 924385 ACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTTGACGTGAGTAACC------AT--------AG------AAGACACAGGTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726391 127 - 10587913 ACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTTGACGTGAGTAACC------AT--------AG------AAGACACAGCTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061475 126 - 98464013 ACATGGATCAGATCTTGAG--AAAAAGAGATGCAATCC-CTTAAAATTTGCACCATATTATTCAGATCTCTTTGAGGTGGGTAAGC------AT--------AG------AAGATACAGGTAACATC-GGATGGCTCTTAA--TGTAGGGCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733096 127 + 27742158 ACATGCATCAGGTCTTGAG--AAAAAGAGATGCAATCC-TTTAAAATTTGTACCATATTATTCAGATCTCTTTGAGGTGGGTAAGC------AT--------AG------AAGACACAGGTAACATCTGGATGGCTCTTAA--AGTAGGGCC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270490 127 - 4835464 ACATGGATCAGATCTTGAG--AAAAAGAGATGCAATCC-CTTAAAATTTGCACCATATTATTGAGATCTCTTTGAGGTGGGTAAGC------AT--------AG------AAGACAAAGGTAACATCCAGATGGCTCTTAA--TATAGGGCC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736477 127 + 4093027 ACATGGATCAGGTCTTGAG--AAAAAGAGATGCAATCC-CTTAAAATTTGCATCATATTATTCAGATCTCTTTGAGGTGGGTAAGC------AC--------AG------AAGACACAGATAACATCCTGATGGCTCTTAA--TATAGGGCC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072873 100 + 30473821 ------GTCAGTTCTTGGG--AAAAAGAGATGTGACGT-GCTAATATTTGTTCCATATTACTCAAATTTCTTTGAGGTGAGTAATCACAAAAAT--------AG------AAGACACAAGGAA----------------------------- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45781391 122 - 149736546 ACATACATGGGCGTTTAGG--AAAGAGATGT----TCT-TTTAAAAATTGTTCTGAGTTATTCTAG-CTTTTGGAGGCAGATAAGC------AG--------AG--CAATAAAAGGCAGATAATATAAG----ATATTTTT--TGGAAGGAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16607288 133 + 58134056 ATATAGATCAGTTCTCAAGAAAAAAAGAAATGCGACTC-CATAAAATTTGTTCCATATTATTCAAATTCCTTTTA--TGAGTAAGT------AT--------AAGGCTATAAAACACAGGTAATATCAAAGCTGTTCTTCA--TGTAGGACT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1853467 139 - 2187301 TTATGGATCAATTCTTAGGCAAAAAAGAGATGCTACCCTTTTAAAATTTGTTCCATATTATTCAAATTTCTTTTCAGTGAGAAAGA------ATAAAAGAAGAG------AAGACACTGA-AATATCATTGTTACTCTTTAGGTGTAAAGCT i dasNov3.JH563077 C 0 I 640 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 183845 334 + 958716 I a score=38852.000000 s hg38.chrUn_KI270749v1 116929 8 + 158759 ---TTAGC-----AGT s panTro5.chr3 202004165 8 - 202621043 ---TTAGC-----AGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772181 8 - 205426864 ---TTAGC-----AGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2414 8 - 17846 ---TTAGC-----AGT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591119 8 + 86207423 ---TTAGC-----AAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072118 13 + 204787373 ---TTAGCAATCTAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003966 13 - 192460366 ---TTAGCAATCTAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115907 13 - 17224310 ---TTAGCAATCTAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428107 13 - 41321030 ---TTAGCAATCTAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499679 13 - 101219884 ---TTAGCAATCTAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885547 13 - 924385 ---TTAGCAATCTAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726518 13 - 10587913 ---TTAGCAATCTAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061601 11 - 98464013 AAAGTAGT-----ATT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733223 8 + 27742158 ---TTAGC-----AAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270617 8 - 4835464 ---TTAGC-----AAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736604 8 + 4093027 ---TTAGC-----AAT i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45781513 8 - 149736546 ---TCAGC-----AAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16607421 7 + 58134056 ---CTGTA-----AA- i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 615058 7631 + 2414909 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 183845 334 + 958716 I e otoGar3.GL873534 11072973 0 + 30473821 C e dasNov3.JH563077 1853606 640 - 2187301 I a score=343327.000000 s hg38.chrUn_KI270749v1 116937 32 + 158759 CTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTGT------------------- s panTro5.chr3 202004173 32 - 202621043 CTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTGT------------------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772189 32 - 205426864 CTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTGT------------------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2422 32 - 17846 CTATTCA-----------GTCTTTTAC---------CATGTAACTA--CTTTGT------------------- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591127 32 + 86207423 CTACTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTGT------------------- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072131 32 + 204787373 CTACTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i rheMac8.chr2 C 0 I 166 s macFas5.chr2 61003979 32 - 192460366 CTACTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i macFas5.chr2 C 0 I 166 s macNem1.NW_012018021v1 11115920 32 - 17224310 CTACTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428120 32 - 41321030 CTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i cerAty1.NW_012009469v1 C 0 I 166 s chlSab2.chr22 64499692 32 - 101219884 CTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i chlSab2.chr22 C 0 I 166 s manLeu1.NW_012098965v1 885560 32 - 924385 CTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i manLeu1.NW_012098965v1 C 0 I 165 s colAng1.NW_012114711v1 6726531 32 - 10587913 CTATTCA-----------GTCTTTTAC---------CATGTAACTA--CTTTAT------------------- i colAng1.NW_012114711v1 C 0 I 166 s calJac3.chr15 46061612 32 - 98464013 CTATTCA-----------GTCTCTTAC---------CATATGACTA--CTTTAT------------------- i calJac3.chr15 C 0 I 156 s saiBol1.JH378125 27733231 32 + 27742158 TGAGTCA-----------GTCTCTTAC---------CATATGACTA--CTTTAT------------------- i saiBol1.JH378125 C 0 I 159 s cebCap1.NW_016107467v1 270625 32 - 4835464 CTATTCA-----------GTCTCTTAA---------CATATGACTA--CTTTAT------------------- i cebCap1.NW_016107467v1 C 0 I 159 s aotNan1.NW_018502033v1 3736612 32 + 4093027 CTATTCA-----------GTCTCTTAC---------CATATGACTA--CTTTAT------------------- i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 622689 32 + 2414909 CTACTCA-----------GTCTTTTTC---------CATGTGACTA--CTTTAT------------------- i proCoq1.NW_012148064v1 I 7631 C 0 s otoGar3.GL873534 11072973 13 + 30473821 -TATTTA-----------TTCTCTT------------------------------------------------ i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45781521 52 - 149736546 CTGtttatatatatattttttttttaCTTGACCACATATGTGACTG--TGATGT------------------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16607428 52 + 58134056 CTACTT------------GTTTTTTCC---------CATGTGACTAGTCTTTGTTTCTGAATATTATTTTCGT i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1384494 1306 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57733963 1307 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 183845 334 + 958716 I e dasNov3.JH563077 1853606 640 - 2187301 I a score=43384.000000 s hg38.chrUn_KI270749v1 116969 2 + 158759 AT s panTro5.chr3 202004205 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772221 2 - 205426864 AT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2454 2 - 17846 AT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591159 2 + 86207423 AT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072329 2 + 204787373 at i rheMac8.chr2 I 166 C 0 s macFas5.chr2 61004177 2 - 192460366 at i macFas5.chr2 I 166 C 0 s macNem1.NW_012018021v1 11115952 2 - 17224310 AT i macNem1.NW_012018021v1 C 0 I 471 s cerAty1.NW_012009469v1 17428318 2 - 41321030 at i cerAty1.NW_012009469v1 I 166 C 0 s chlSab2.chr22 64499890 2 - 101219884 at i chlSab2.chr22 I 166 C 0 s manLeu1.NW_012098965v1 885757 2 - 924385 at i manLeu1.NW_012098965v1 I 165 C 0 s nasLar1.chr2 57735270 2 + 181502896 at i nasLar1.chr2 I 1307 I 170 s colAng1.NW_012114711v1 6726729 2 - 10587913 at i colAng1.NW_012114711v1 I 166 C 0 s rhiRox1.KN296641v1 1385800 2 - 1467263 at i rhiRox1.KN296641v1 I 1306 I 170 s calJac3.chr15 46061800 2 - 98464013 at i calJac3.chr15 I 156 C 0 s saiBol1.JH378125 27733422 2 + 27742158 at i saiBol1.JH378125 I 159 C 0 s cebCap1.NW_016107467v1 270816 2 - 4835464 at i cebCap1.NW_016107467v1 I 159 C 0 s aotNan1.NW_018502033v1 3736644 2 + 4093027 AT i aotNan1.NW_018502033v1 C 0 I 202 s tarSyr2.KE939134v1 184179 2 + 958716 at i tarSyr2.KE939134v1 I 334 I 172 s proCoq1.NW_012148064v1 622721 2 + 2414909 AT i proCoq1.NW_012148064v1 C 0 I 416 s mm10.chr6 45781573 1 - 149736546 -T i mm10.chr6 C 0 I 8 s canFam3.chr20 16607480 2 + 58134056 AT i canFam3.chr20 C 0 I 31 s dasNov3.JH563077 1854246 2 - 2187301 at i dasNov3.JH563077 I 640 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e micMur3.chr32 1622907 2717 - 9149476 I e papAnu3.chr2 59562750 1494 + 187378091 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e otoGar3.GL873534 11072986 0 + 30473821 C a score=230426.000000 s hg38.chrUn_KI270749v1 116971 36 + 158759 GTGGAAAAAT-----------------------------------------------------------------------------------------------------------TGTTACATAAACAA-----------------AATAGAAGCATT s panTro5.chr3 202004207 36 - 202621043 GTGGAAAAAT-----------------------------------------------------------------------------------------------------------TGTTACATAAACAA-----------------AATAGAAGCATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772223 36 - 205426864 GTGGAAAAAT-----------------------------------------------------------------------------------------------------------TGTTACATAAACAA-----------------AATAGAAGCATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2456 36 - 17846 GTGgaaaaat-----------------------------------------------------------------------------------------------------------tgttacataaacaa-----------------gatagaagcatt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591161 36 + 86207423 GTGGAAAAAT-----------------------------------------------------------------------------------------------------------TGTTACATAAACAA-----------------AATAGAAGCATT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072331 36 + 204787373 gtggaaacat-----------------------------------------------------------------------------------------------------------tgttacgtaaacaa-----------------aatagaagcttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004179 36 - 192460366 gtggaaacat-----------------------------------------------------------------------------------------------------------tgttacgtaaacaa-----------------aatagaagcttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116425 36 - 17224310 gtggaaacat-----------------------------------------------------------------------------------------------------------tgttacgtaaacaa-----------------aatagaagcttt i macNem1.NW_012018021v1 I 471 C 0 s cerAty1.NW_012009469v1 17428320 36 - 41321030 gtagaaacat-----------------------------------------------------------------------------------------------------------tgttacgtaaacaa-----------------aatagaagcttt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499892 36 - 101219884 gtggaaacat-----------------------------------------------------------------------------------------------------------cgttacgtaaacaa-----------------aatagaagcttt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885759 36 - 924385 gtggaaacat-----------------------------------------------------------------------------------------------------------tgttacgtaaacaa-----------------aatagaagcttt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726731 36 - 10587913 gtggaaaaat-----------------------------------------------------------------------------------------------------------tgttacataaacaa-----------------aatagactcttt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061802 35 - 98464013 gtggagaaat-----------------------------------------------------------------------------------------------------------tgttacataaacaa------------------atagaagtgtt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733424 35 + 27742158 gcggagaaat-----------------------------------------------------------------------------------------------------------tgttacataaacaa------------------atagaagcgtt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270818 35 - 4835464 gtggagaaat-----------------------------------------------------------------------------------------------------------tgttacataaacaa------------------atagaagaatt i cebCap1.NW_016107467v1 C 0 C 0 s otoGar3.GL873534 11072986 8 + 30473821 --------------------------------------------------------------------------------------------------------------------------------------------------------GAAATTTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45781582 53 - 149736546 TTACTAAAAC-----------------------------------------------------------------------------------------------------------AAACAAATAAATAACAGGAAGAAGGCGAGTAGAGAGAGGCATT i mm10.chr6 I 8 I 59 s canFam3.chr20 16607513 143 + 58134056 gtgaaatgatcaaaaacgaatctaattagaaatgatttaaggaactaggtacagacacttagttgacagaagacaacatttcagagagacatcatggttgtctctaagatgtgaatatgttactataatag-----------------atcagaaacatt i canFam3.chr20 I 31 C 0 s dasNov3.JH563077 1854248 36 - 2187301 gtggataggt-----------------------------------------------------------------------------------------------------------tgtggcataaacaa-----------------agcataaacatt i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 622723 416 + 2414909 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1385802 170 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57735272 170 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 184181 172 + 958716 I e aotNan1.NW_018502033v1 3736646 202 + 4093027 I a score=84504.000000 s hg38.chrUn_KI270749v1 117007 12 + 158759 ttctctttgata- s panTro5.chr3 202004243 12 - 202621043 ttctctttgata- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772259 12 - 205426864 ttttctttgata- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2492 10 - 17846 ttctcttt--ta- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591197 12 + 86207423 ttctctttgata- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072367 12 + 204787373 ttctctttgatt- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004215 12 - 192460366 ttctctttgatt- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116461 12 - 17224310 ttctctttgatt- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428356 12 - 41321030 ttctctttgatt- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499928 12 - 101219884 ttctctttgatt- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885795 12 - 924385 ttctctttgatt- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726767 12 - 10587913 ttctctttgatt- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061837 12 - 98464013 ttctcattgagt- i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27733459 12 + 27742158 ttctcattgatt- i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 270853 12 - 4835464 ttctcattgatt- i cebCap1.NW_016107467v1 C 0 I 1 s otoGar3.GL873534 11072994 1 + 30473821 T------------ i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16607656 12 + 58134056 ttctctgtgatt- i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1854284 11 - 2187301 --ttctttgagtc i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 622723 416 + 2414909 I e mm10.chr6 45781635 59 - 149736546 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1385802 170 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57735272 170 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 184181 172 + 958716 I e aotNan1.NW_018502033v1 3736646 202 + 4093027 I a score=310921.000000 s hg38.chrUn_KI270749v1 117019 25 + 158759 ccaagagtagagctaagaccaataa s panTro5.chr3 202004255 25 - 202621043 ccaagagtagagttaagaccaataa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772271 25 - 205426864 ccaagagtacagctaagaccaataa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2502 25 - 17846 ccaagagtagagctaagaccaataa i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591209 25 + 86207423 ccaagagtagagctaagaccaatag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072379 25 + 204787373 ccaagagtagagctaagaccaatag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004227 25 - 192460366 ccaagagtagagctaagaccaatag i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116473 25 - 17224310 ccaagagtagagctaagaccaatag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428368 25 - 41321030 ccaagagtagagctaagaccaatag i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499940 25 - 101219884 ccaagagtagagctaagaccaatag i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885807 25 - 924385 ccaagagtagagctaagaccaatag i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726779 25 - 10587913 ccaagagtagagctaagatcaacag i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061850 25 - 98464013 ccaagaatagagctaagatcagtag i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27733472 25 + 27742158 ccaagagtagagctaagatcagtag i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 270866 25 - 4835464 ccgagagtagagctaagatcagtag i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3736848 25 + 4093027 ccaagagtagagctaagatcagtag i aotNan1.NW_018502033v1 I 202 C 0 s otoGar3.GL873534 11072995 22 + 30473821 ---Ggagtagagctaataccaatgg i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16607669 25 + 58134056 ctaacagtagaaccaggatggacgg i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1854295 25 - 2187301 acaagagtagaactagtggcaatgg i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 622723 416 + 2414909 I e mm10.chr6 45781635 59 - 149736546 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1385802 170 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57735272 170 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 184181 172 + 958716 I a score=1170040.000000 s hg38.chrUn_KI270749v1 117044 95 + 158759 atcaatattaagggaaaa-------------ttttaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTT s panTro5.chr3 202004280 95 - 202621043 atcaatattaagggaaaa-------------ttttaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772296 95 - 205426864 atcaatattaagggaaat-------------ttttaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2527 95 - 17846 atcaatattaagggaaaa-------------ttttaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591234 95 + 86207423 atcaatattaagggaaaa-------------ttttaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072404 95 + 204787373 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004252 95 - 192460366 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116498 95 - 17224310 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428393 95 - 41321030 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACCACCCTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499965 95 - 101219884 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTCATTAACTAACAACCCTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885832 95 - 924385 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726804 95 - 10587913 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCGGTTGTTGTTATTAACTAACAACCCTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061875 95 - 98464013 atcaatattaaagggaaa-------------tcttacatcagatataagaaaacaa-ttttctaacagctcaaattgtACTCAGTTGTTGTTATTAACTAACAATCCTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733497 95 + 27742158 atcaatattaaagggaaa-------------tcttgtatcagatataagaaaacaa-ttttctaacagttcaaattatacaCAGTTGTTGTCATTAACTAACAACCCTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270891 95 - 4835464 atcaatattaaagagaaa-------------tcttatatcagatataagaaaacaa-ttttctaacagttcaaattatACTCAGTTGTTGTCATTAACTAACAACCCTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736873 95 + 4093027 atcgatattaaagggaaa-------------tcttacatcagatataagaaaacaa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAGCCCTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11073017 93 + 30473821 atcaatgttaaag-aata-------------tttcatgtcagagat-aggaaacaa-ttttctaataagtcaaaTTATAATCAATTACCATTATCAACCAAGAACTCAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45781694 108 - 149736546 GGCATTAGCAAGAGCAAATAAGACAGTGAGCTTTCAGCTTGACAGCACAAAAGCAG-TGCAGTAAGAGTTCAAGTCACACTCACCCTCCACTATTAGCAAAGCCCCCAA i mm10.chr6 I 59 C 0 s canFam3.chr20 16607694 90 + 58134056 atcagtgttaaagggaaa-------------tttcagctcagatgtgaggagaaaatttttctaacaGCTCAAATTATAGTTAGGTG------TTAAACAATAATTCTA i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1854320 90 - 2187301 atcaatgttaaag--agg-------------tttcatctcagatgtaaggaaatat-ttttctaacaatttgaTTTATATTCAGTTATTG---CTAAACAATAGCTCTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 622723 416 + 2414909 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1385802 170 - 1467263 I e papAnu3.chr2 59562750 1494 + 187378091 I e nasLar1.chr2 57735272 170 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 184181 172 + 958716 I a score=20542.000000 s hg38.chrUn_KI270749v1 117139 2 + 158759 AT s panPan2.chr3 204772391 2 - 205426864 AT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2622 2 - 17846 AT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591329 2 + 86207423 AC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072499 2 + 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004347 2 - 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116593 2 - 17224310 AT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428488 2 - 41321030 AT i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59564244 2 + 187378091 AT i papAnu3.chr2 I 1494 C 0 s chlSab2.chr22 64500060 2 - 101219884 AT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885927 2 - 924385 AT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726899 2 - 10587913 AT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061970 2 - 98464013 AT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733592 2 + 27742158 AT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270986 2 - 4835464 AT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736968 2 + 4093027 AT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11073110 2 + 30473821 AT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45781802 2 - 149736546 AT i mm10.chr6 C 0 C 0 s canFam3.chr20 16607785 1 + 58134056 A- i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1854410 2 - 2187301 AC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 622723 416 + 2414909 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1385802 170 - 1467263 I e nasLar1.chr2 57735272 170 + 181502896 I e ponAbe2.chr3 69660213 1302 + 202140232 I e rhiBie1.NW_016820128v1 1238749 1491 - 2311269 I e tarSyr2.KE939134v1 184181 172 + 958716 I e panTro5.chr3 202004375 0 - 202621043 C a score=17413.000000 s hg38.chrUn_KI270749v1 117141 1 + 158759 G s panPan2.chr3 204772393 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2624 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69661515 1 + 202140232 G i ponAbe2.chr3 I 1302 C 0 s nomLeu3.chr21 67591331 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072501 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004349 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116595 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428490 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59564246 1 + 187378091 G i papAnu3.chr2 C 0 I 907 s chlSab2.chr22 64500062 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885929 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57735442 1 + 181502896 G i nasLar1.chr2 I 170 C 0 s colAng1.NW_012114711v1 6726901 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1385972 1 - 1467263 G i rhiRox1.KN296641v1 I 170 C 0 s rhiBie1.NW_016820128v1 1240240 1 - 2311269 G i rhiBie1.NW_016820128v1 I 1491 C 0 s calJac3.chr15 46061972 1 - 98464013 G i calJac3.chr15 C 0 I 6 s saiBol1.JH378125 27733594 1 + 27742158 A i saiBol1.JH378125 C 0 I 6 s cebCap1.NW_016107467v1 270988 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 I 6 s aotNan1.NW_018502033v1 3736970 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 I 6 s otoGar3.GL873534 11073112 1 + 30473821 A i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45781804 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16607786 1 + 58134056 G i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 622723 416 + 2414909 I e micMur3.chr32 1622907 2717 - 9149476 I e tarSyr2.KE939134v1 184181 172 + 958716 I e dasNov3.JH563077 1854412 0 - 2187301 C e panTro5.chr3 202004375 0 - 202621043 C a score=40678.000000 s hg38.chrUn_KI270749v1 117142 2 + 158759 AT s panTro5.chr3 202004375 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772394 2 - 205426864 AT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2625 2 - 17846 AT i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69661516 2 + 202140232 AT i ponAbe2.chr3 C 0 I 1640 s nomLeu3.chr21 67591332 2 + 86207423 AT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072502 2 + 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004350 2 - 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116596 2 - 17224310 AT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428491 2 - 41321030 AT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64500063 2 - 101219884 AT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885930 2 - 924385 AT i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57735443 2 + 181502896 AT i nasLar1.chr2 C 0 I 891 s colAng1.NW_012114711v1 6726902 2 - 10587913 AT i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1385973 2 - 1467263 AT i rhiRox1.KN296641v1 C 0 I 282 s rhiBie1.NW_016820128v1 1240241 2 - 2311269 AT i rhiBie1.NW_016820128v1 C 0 I 895 s calJac3.chr15 46061979 2 - 98464013 AT i calJac3.chr15 I 6 C 0 s saiBol1.JH378125 27733601 2 + 27742158 AT i saiBol1.JH378125 I 6 C 0 s cebCap1.NW_016107467v1 270995 2 - 4835464 AT i cebCap1.NW_016107467v1 I 6 C 0 s aotNan1.NW_018502033v1 3736977 2 + 4093027 AT i aotNan1.NW_018502033v1 I 6 C 0 s mm10.chr6 45781805 2 - 149736546 AC i mm10.chr6 C 0 I 2 s canFam3.chr20 16607787 2 + 58134056 GT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1854412 2 - 2187301 AT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 42345 744 + 635616 I e eulMac1.LGHX01000499v1 42139 744 + 631505 I e proCoq1.NW_012148064v1 622723 416 + 2414909 I e micMur3.chr32 1622907 2717 - 9149476 I e papAnu3.chr2 59564247 907 + 187378091 I e tarSyr2.KE939134v1 184181 172 + 958716 I e otoGar3.GL873534 11073113 2 + 30473821 I a score=18459.000000 s hg38.chrUn_KI270749v1 117144 1 + 158759 A s panTro5.chr3 202004377 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772396 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2627 1 - 17846 A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591334 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072504 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004352 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116598 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428493 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64500065 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885932 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726904 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061981 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733603 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270997 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736979 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 184353 1 + 958716 A i tarSyr2.KE939134v1 I 172 I 861 s eulMac1.LGHX01000499v1 42883 1 + 631505 A i eulMac1.LGHX01000499v1 I 744 C 0 s eulFla1.LGHW01000501v1 43089 1 + 635616 A i eulFla1.LGHW01000501v1 I 744 C 0 s otoGar3.GL873534 11073115 1 + 30473821 A i otoGar3.GL873534 I 2 C 0 s canFam3.chr20 16607789 1 + 58134056 A i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1854414 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 622723 416 + 2414909 I e mm10.chr6 45781807 2 - 149736546 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1385975 282 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I a score=14483.000000 s hg38.chrUn_KI270749v1 117145 1 + 158759 T s panTro5.chr3 202004378 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772397 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2628 1 - 17846 T i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591335 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072505 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004353 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116599 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428494 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64500066 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885933 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726905 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061982 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733604 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270998 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736980 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 42884 1 + 631505 C i eulMac1.LGHX01000499v1 C 0 I 1092 s eulFla1.LGHW01000501v1 43090 1 + 635616 C i eulFla1.LGHW01000501v1 C 0 I 1094 s otoGar3.GL873534 11073116 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16607791 1 + 58134056 T i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1854415 1 - 2187301 T i dasNov3.JH563077 C 0 I 1 e proCoq1.NW_012148064v1 622723 416 + 2414909 I e mm10.chr6 45781807 2 - 149736546 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1385975 282 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=952951.000000 s hg38.chrUn_KI270749v1 117146 88 + 158759 CTG------CATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTCATTTTCGTACAGTCTTGGA s panTro5.chr3 202004379 88 - 202621043 CTG------CATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGGGACGGGGTTATGTCATTTTCCTACAGTCTTGGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772398 88 - 205426864 CTG------CATACTAATACTTGT-AA--AATCAAGACTAATT------------TGATAT-----TCATTTCTGGTAGGGGACGGGGTTATGTCATTTTCCTACAGTCTTGGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2629 88 - 17846 CTG------CATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTCATTTTCCTACAGTCTTGGA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591336 88 + 86207423 CTG------CATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTCATTTTCCTATAGTCTTGGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072506 88 + 204787373 CTG------CATACTAATACTTGT-AA--AATCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004354 88 - 192460366 CTG------CATACTAATACTTGT-AA--AATCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116600 88 - 17224310 CTG------CATACTAATACTTGT-AA--ACTCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428495 88 - 41321030 CTG------CATACTAATACTTGT-AA--AATCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64500067 88 - 101219884 CTG------CATGCTAATACTTGT-AA--AATCAAGATAAAAT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885934 88 - 924385 CTG------CATACTAATACTTGT-AA--AATCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726906 89 - 10587913 CTG------CATACTAATACTTGTAAA--AATCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTGTGTTGTTTTCCTATAGTCTTGGG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061983 94 - 98464013 TTGTAAAATCATACTAATACTTGT-AA--ACTCAAGATTAATT------------TCATAT-----TCATTTCTGATAGGAGATTGGGTTATGATGTTTTTCTGTAGTCTTGGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733605 94 + 27742158 TTGTAAAATCATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGAGATCAGGTTATGATGTTTTCCTGTAATCTTGGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270999 94 - 4835464 TTGTAAAATCATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGAGATCGGGTTATGATGTTTTCCTGCAATCTTGGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736981 94 + 4093027 TTGGAAAATTATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGAGATCGAGTTATGATGTTTTCCTGTAGTCTTGGT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11073117 88 + 30473821 CTG------CAAATTATGACTTGT-AA--AATCGAGTCCAATT------------TGATAT-----CCACTTGTTATAGAGGCCTGGGTTGTGATGCTCTCGTATAATCTTGCT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45781809 81 - 149736546 CTG------C---CTTACACTGCA-AAGCAATCAGG-----TT------------TCACGC-----TGCCTCTTTATACAAG-CGATCCCATAGTGCTCTCACATAATCCTGGC i mm10.chr6 I 2 C 0 s canFam3.chr20 16607792 93 + 58134056 TTA------CAAACTAATACTTGT-AA--AACTAAGTTAGAAT------------CACTATCTCAATTGCTTTTGATAAGGAATTGAGTTATGGTACCCTCACAAAATCTTGAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1854417 93 - 2187301 TTG------CAAACTGGTATTTGT-AA--GATGGCATTTAATTTGGAGAAGTGGATGATAT-----CCTTATTTGATAGGGGGT-------TGTTGCATTGGAGTAAATTtggt i dasNov3.JH563077 I 1 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 622723 416 + 2414909 I e micMur3.chr32 1622907 2717 - 9149476 I e rhiRox1.KN296641v1 1385975 282 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=2126722.000000 s hg38.chrUn_KI270749v1 117234 148 + 158759 GAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGT-AAAGG-TTATATATTTTTAATTTCACTTAATAT-TTCTGCTTTTATTTTTCTACACATGACCATAAATATATATCTTCATGTATGCATGATG-AAGCATG s panTro5.chr3 202004467 148 - 202621043 GAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTGTTAGAAATCTTGT-AAAGG-TTATATATTTTTAATTTCACTTAATAT-TTCTGCTTTTATTTTTCTACACATGACCATAAATATATATCTTCATGTATGCATCATG-AAGCATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772486 148 - 205426864 GAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGT-AAAGG-TTATAtatttttattttcacttaatat-ttctgcttttatttttCTACACATGACCATAAATATATATCTTCATGTATGCATGATG-AAGCATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2717 148 - 17846 GAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGT-AAAGG-TTATATATTTTTAATTTCACTTAATAT-TTCTGCTTTTATTTTTCTACACATGACCATAAATATATATCTTCATGTATGCATGATG-AAGCATG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591424 148 + 86207423 GAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGT-AAAGG-TTATACGtttttaatttcacttaatat-ttctgtttttatttttCTACACATGACCATAAATACATATTTTCATGTATGCATGATG-AAGCATG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072594 148 + 204787373 GAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGT-GAAGG-TTATATATTTTTAATTTCACTTAATAT-TTCTGCTTTTGTTTTTCTACACATGACCATAAATATATCTCTTCTTGTATGCATGATG-AAACATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004442 148 - 192460366 GAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGT-GAAGG-TTATATATTTTTAATTTCACTTAATAT-TTCTGCTTTTGTTTTTCTACACATGACCATAAATATATCTCTTCTTGTATGCATGATG-AAACATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116688 148 - 17224310 GAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGT-GAAGG-TTATATATTTTTAATTTCACTTAATAT-TTCTGCTTTTGTTTTTCTACACATGACCATAAATATATCTCTTCTTGTATGCATGATG-AAACATG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428583 148 - 41321030 GAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGT-GAAGG-TTATATATTTTTAATTTCACTTAATAT-TTCTGCTTTTGTTTTTCTACACATGACCATAAATACATCTCTTCTTGTATGCATGATG-AAACATG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64500155 148 - 101219884 GAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGT-AAAGG-TTATATATTTTTAATTTCACTTAATAT-TTCTGCTTTTATTTTTCTACACATGACCATCAATATATCCCTTCTTGTATGCATGATG-AAACATG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 886022 148 - 924385 GAGAAAATAATTTGTTAAATGT------------AATTTGCTATCATCTATTAGAAATCTTGT-GAAGG-TTATATATTTTTCATTTCACTTAATAT-TTCTGCTTTTGTTTTTCTACACATGACCATAAATACATCTCTTCTTGTATGCATGATG-AAACATG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726995 148 - 10587913 GAGAAAAGAATTTGTTAAATAC------------AATTTACTATCATCTATTAGAAATCTTGT-AAAGG-TTATATATTTTTAATTTCACTAAATAT-TTCTGCTTTTATTTTTCTACACATGACCATAAATATATCTCTTCTTATATGCATGATG-AAACATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062077 148 - 98464013 AAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGC-AAAGG-TTACATATTTTTAATTTCACTTAATAT-TTCTGTTTTTATTTTTCTACACATGACCATAAATATATCTCTTCATGTATGCATGATG-AAGCATG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733699 148 + 27742158 TAGAAAATAATTTGTTAAATGC------------AATTTACTATCATCTATTAGAAATCTTGC-AAAGG-TTACATATTTTTAATTTCACTTAATAT-TTCTGTTTTTATTTTTTTACACATGACCATAAATATATCTCTTCATGTATGCATGAGG-AAGCATG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271093 148 - 4835464 AAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGC-AAAGG-TTACAtatttttaatttcacttaatat-ttctgtttttatttttCTACACATGACCATAAATATATCTTTTCATGTATGCATGATG-AAGCATG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737075 148 + 4093027 AAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGC-AAAGG-TTGCATATTTTTAATTTCACTCAATAT-TTCTGTTTTTATTTTTCTACATATGACCATAAATATATCTCTTCATGTATGCATGATG-AAGCATG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1625624 149 - 9149476 GAGAAAATAGTTTGTTAAATGC------------AATTCGGCAGCATCTATCACAAACCTTTTCAAAGGTTTAGAT-TCTTTAGATTCACTTAATAA-TTCTGATTTCATTTTTCCACACATGACCATAAATATATCTGTTCATGTTTGCACTATG-AAGCATG i micMur3.chr32 I 2717 I 397 s proCoq1.NW_012148064v1 623139 148 + 2414909 GAGAAAATAATTTGTTAAATGC------------AATTTGGCAGCATCTGTCATAAACCTTTTCAAAGA-TTATAT-TCTTTAGATTCACTTAATAA-TTCTGATTTCATTTTTCCACACATGACCATAAATATATCTGTTCATGTTTGCACTATG-AAGCATG i proCoq1.NW_012148064v1 I 416 C 0 s otoGar3.GL873534 11073205 146 + 30473821 GCGATAATGATTTGTTAAATAC------------ACTTTGGCAGCATCTATCAAAAATCTTTTCAAAGG-TTTTAT-TCTTTCTGTTCACGTAATCA--TCCAATTTCA-TTTTCTATACAGGACCATAAATATATTTGTTCGTGTTTGCACTGTG-AAGCCTG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45781890 129 - 149736546 ---TGCACAA--TGTTAAACAC------------AAGCTAGAAACATCTTTCTATGTTTATTT-------TAGTAATTCCTTTATTTTGTAAAGTAAGTTCACAGTTAATTGTTCTGAATATGACTACAA-----------TGTCTGTGCATATTGAAAACATG i mm10.chr6 C 0 C 0 s canFam3.chr20 16607885 145 + 58134056 GGAAATGTAATTTGTTAAATGC------------AATTTGGTACCATCTCTCAAAAAAATTTT-AATGG-TTCTGGATTTTGGTATTCACCTAACAA-TTC---TTTCATTTTTCCACACATGATTATAAATACATCTGTTCATATTTGTTCAATG-AAGCATA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1854510 159 - 2187301 gggtatgtaatttgttaaatgcattttgaagggaaatttggcagcatctatcaaacatttt-t-aatat-gtgtacctgtttagcttcatatagaaa-ttcttctttctgttttctgcacatgagcataaatatacctgttcaactttgctcaatg-aaacatg i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e rhiRox1.KN296641v1 1385975 282 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=5501.000000 s hg38.chrUn_KI270749v1 117382 2 + 158759 GT s gorGor5.CYUI01007532v1 2865 2 - 17846 GT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591572 2 + 86207423 GT i nomLeu3.chr21 C 0 C 0 s calJac3.chr15 46062225 2 - 98464013 GT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733847 2 + 27742158 GC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271241 2 - 4835464 GT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737223 2 + 4093027 GT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 623287 2 + 2414909 GT i proCoq1.NW_012148064v1 C 0 I 155 s otoGar3.GL873534 11073351 2 + 30473821 AT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782019 2 - 149736546 CT i mm10.chr6 C 0 C 0 s canFam3.chr20 16608030 1 + 58134056 -T i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1854669 2 - 2187301 at i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e micMur3.chr32 1625773 397 - 9149476 I e rhiRox1.KN296641v1 1385975 282 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I e manLeu1.NW_012098965v1 886170 0 - 924385 C e macNem1.NW_012018021v1 11116836 0 - 17224310 C e rheMac8.chr2 66072742 0 + 204787373 C e colAng1.NW_012114711v1 6727143 0 - 10587913 C e chlSab2.chr22 64500303 0 - 101219884 C e cerAty1.NW_012009469v1 17428731 0 - 41321030 C e macFas5.chr2 61004590 0 - 192460366 C e panPan2.chr3 204772634 0 - 205426864 C e panTro5.chr3 202004615 0 - 202621043 C a score=186945.000000 s hg38.chrUn_KI270749v1 117384 29 + 158759 -------------------GAGTAACAGATTTTTT--AAT-GGAATAAGCT s panTro5.chr3 202004615 27 - 202621043 ---------------------GTAACAGATTTTTT--AAT-GGAATAAGCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772634 27 - 205426864 ---------------------GTAACAGATTTTTT--AAT-GGAATAAGCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2867 29 - 17846 -------------------GAGTAACAGATTTTTT--AAT-GGAATAAGCT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591574 29 + 86207423 -------------------GAGTAACAGATTTTTT--AAT-GGAATAAGCT i nomLeu3.chr21 C 0 I 17 s rheMac8.chr2 66072742 29 + 204787373 ---------------------GTAATAGATTTTTTTTAAT-GGAATTAGCT i rheMac8.chr2 C 0 I 17 s macFas5.chr2 61004590 29 - 192460366 ---------------------GTAATAGATTTTTTTTAAT-GGAATTAGCT i macFas5.chr2 C 0 I 17 s macNem1.NW_012018021v1 11116836 29 - 17224310 ---------------------GTAATAGATTTTTTTTAAT-GGAATTAGCT i macNem1.NW_012018021v1 C 0 I 17 s cerAty1.NW_012009469v1 17428731 28 - 41321030 ---------------------GTAACAGA-TTTTTAAAAT-GGAATTAGCT i cerAty1.NW_012009469v1 C 0 I 17 s chlSab2.chr22 64500303 27 - 101219884 ---------------------GTAATAGATTTTTT--AAT-AGAACTAGCT i chlSab2.chr22 C 0 I 17 s manLeu1.NW_012098965v1 886170 28 - 924385 ---------------------GTAATAGATTTTTT-AAAT-GGAATTAGCT i manLeu1.NW_012098965v1 C 0 I 17 s colAng1.NW_012114711v1 6727143 27 - 10587913 ---------------------GTAATAGATTTTTT--AAT-GGAATTAGCT i colAng1.NW_012114711v1 C 0 I 17 s calJac3.chr15 46062227 31 - 98464013 -------------------GGGTAATAGATTTTTTTTAAT-GGAATAAGCT i calJac3.chr15 C 0 I 17 s saiBol1.JH378125 27733849 30 + 27742158 -------------------AGGTAATAGA-TTTTTTTAAT-GGAATAAGCT i saiBol1.JH378125 C 0 I 17 s cebCap1.NW_016107467v1 271243 30 - 4835464 -------------------GGGTAATAGA-TTTTTTTAAT-GGAATAAGCT i cebCap1.NW_016107467v1 C 0 I 17 s aotNan1.NW_018502033v1 3737225 31 + 4093027 -------------------GGGTAATAGATTTTTTTTAAT-GGAACAAGCT i aotNan1.NW_018502033v1 C 0 I 17 s otoGar3.GL873534 11073353 31 + 30473821 -------------------CAGTAACAGACTTTTAAAAAT-GGAATTAGGT i otoGar3.GL873534 C 0 I 17 s mm10.chr6 45782021 31 - 149736546 -------------------TGGTAATCTATTTTGAAAAGT-GAAAGGCGCC i mm10.chr6 C 0 C 0 s canFam3.chr20 16608032 31 + 58134056 --------------------GGTAGTAGACTGCTTAAAACAGAAATATGCC i canFam3.chr20 I 1 I 17 s dasNov3.JH563077 1854671 43 - 2187301 aatagaaaaaaaatggaaaccatgataaatgttct--acc-aataC----- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 623289 155 + 2414909 I e micMur3.chr32 1625773 397 - 9149476 I e rhiRox1.KN296641v1 1385975 282 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=19110.000000 s hg38.chrUn_KI270749v1 117413 1 + 158759 A s panTro5.chr3 202004642 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772661 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2896 1 - 17846 A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591620 1 + 86207423 A i nomLeu3.chr21 I 17 C 0 s rheMac8.chr2 66072788 1 + 204787373 A i rheMac8.chr2 I 17 C 0 s macFas5.chr2 61004636 1 - 192460366 A i macFas5.chr2 I 17 C 0 s macNem1.NW_012018021v1 11116882 1 - 17224310 A i macNem1.NW_012018021v1 I 17 C 0 s cerAty1.NW_012009469v1 17428776 1 - 41321030 a i cerAty1.NW_012009469v1 I 17 C 0 s chlSab2.chr22 64500347 1 - 101219884 A i chlSab2.chr22 I 17 C 0 s manLeu1.NW_012098965v1 886215 1 - 924385 a i manLeu1.NW_012098965v1 I 17 C 0 s colAng1.NW_012114711v1 6727187 1 - 10587913 a i colAng1.NW_012114711v1 I 17 C 0 s rhiRox1.KN296641v1 1386257 1 - 1467263 A i rhiRox1.KN296641v1 I 282 I 237 s calJac3.chr15 46062275 1 - 98464013 A i calJac3.chr15 I 17 C 0 s saiBol1.JH378125 27733896 1 + 27742158 a i saiBol1.JH378125 I 17 C 0 s cebCap1.NW_016107467v1 271290 1 - 4835464 A i cebCap1.NW_016107467v1 I 17 C 0 s aotNan1.NW_018502033v1 3737273 1 + 4093027 A i aotNan1.NW_018502033v1 I 17 C 0 s otoGar3.GL873534 11073401 1 + 30473821 A i otoGar3.GL873534 I 17 C 0 s mm10.chr6 45782052 1 - 149736546 A i mm10.chr6 C 0 I 20 s canFam3.chr20 16608080 1 + 58134056 A i canFam3.chr20 I 17 C 0 s dasNov3.JH563077 1854714 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 623289 155 + 2414909 I e micMur3.chr32 1625773 397 - 9149476 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=1073093.000000 s hg38.chrUn_KI270749v1 117414 105 + 158759 TTATGGTACTTT-CATTCTATGAAATATTACGTAGTTCTCAATCAAAATGAGAGGGATAGCTGTATAAA-ACCTAAGCTATTGTTAACA--G--------------AAAAAAA-GCATGTAAAC s panTro5.chr3 202004643 105 - 202621043 TTATGGTACTTT-CATTCTATGAAATATTACGTAGTTCTTAATCAAAATGAGAGGGATATCTGTATAAA-ACCTAAACTATTGTTAACA--G--------------AAAAAAA-GCATGTAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772662 105 - 205426864 TTATGGTACTTT-CATTCTATGAAATATTACATAGTTCTTAACCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTATTAACA--G--------------AAAAAAA-GCATGTAAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2897 105 - 17846 TTATGGTACTTT-CATTCTATGAAATATTACATAGTTCTTAATCAAAATCAGAGGGATAGCTGTATAAA-ACCTAAGCTATTGTTAACA--G--------------AAAAAAA-GCATGTAAAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591621 105 + 86207423 TTATGGTACTTT-CATTCTATGAAATGTTACATAGTTCTTAACCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTTTTAACA--G--------------AAAAAAA-GCACATAAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072789 104 + 204787373 TTATGGTACTTC-CATTCTATTAAATGTTACGTCGTTGTTAATCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTGTTAACA--G---------------AAAAAA-GCATGCAAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004637 104 - 192460366 TTATGGTACTTC-CATTCTATTAAATGTTACGTCGTTGTTAATCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTGTTAACA--G---------------AAAAAA-GCATGCAAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116883 104 - 17224310 TTATGGTACTTC-CATTCTATTAAATGTTACGTCGTTGTTAATCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTGTTAACA--G---------------AAAAAA-GCATGCAAAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428777 104 - 41321030 ttatggtacttc-cattctatgaaatgttacgtcgttgttaatcaaaatgagagggatatctgtataaa-acctaagctattgttaaca--g---------------aaaaaa-gcaTGCAAAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64500348 104 - 101219884 TTACGGTACTTC-CATTCTATGAAATGTTATGTCATTGTTAATCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTGTTAACA--G---------------AAAAAA-GCATGCAAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 886216 104 - 924385 ttatggtacttc-cattctatgaaatgttacgtcgttgttaatcaaaatgagagggatatctgtataaa-atctaagctattgttaaca--g---------------aaaaaa-gcatgcaaac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727188 104 - 10587913 ttatggtgcttc-cattctatgaaatgttatgtagttgttaatcaaaatgagagtgatatctgtataaa-atctaagctattgttaaca--g---------------aaaaaa-gcaTGTAAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062276 100 - 98464013 TTATGGTACTTT-CATTTTATGAAACGTTATGTAGTTCTTAATCAAAATGAGAGCAATATCTATATAAATCCCTAAGATT------ACA--G---------------AAAAAACGCATGTAAAC i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27733897 107 + 27742158 ttatggtacttt-cattttatgaaatgttatgtagttcttaatcaaaatgagagcaatatctgtataaatccctaagatgttgttaaca--g--------------aaaaaaacacatgtaaac i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 271291 105 - 4835464 TTATGGTACTTT-TATTTTATGAAATGTTATGTAGTTCTTAATCAAAAGGAGAGCAATATCTATATAAATCCCTAAGATGTTGTTAACA--G---------------AAAAAA-AAATGTAAAC i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3737274 106 + 4093027 TTATGGTACTTT-CATTTTATGAAATGTTACGTAGTTCTTAATCAAAATGAGAGCAATATCTCTATAAATCCCTAAGATATTGTTAACA--G---------------AAAAAATGTATGTAAAC i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11073402 105 + 30473821 TTATTGTACTTTCCATTCGAGGAAATACTGGGCAGTTCTT-ATCAAAATGAGTTGGATTTCTGTGTGAAATTCTAAGACATTGCTATTG--G---------------GGGGGG-TCAGGTGAAG i otoGar3.GL873534 C 0 I 6 s mm10.chr6 45782073 97 - 149736546 TGATAGCACTTT-CCGGTTATCAAACATCCCATTGTTT---ATCAGAAAGGAATTGATTTCCGGGTACAAATCCAA-------TTGACATGG---------------AGAAAA-GCTTATGAAC i mm10.chr6 I 20 C 0 s canFam3.chr20 16608081 120 + 58134056 TGGTGGTATTTT-GATTCTATGCAATAGTATGTGATCCTTCATCAAAATGAGTTGGATTTCTGTGTAAAAATCTAAGACGTTATTAACG--GGGGGGGAGTAGGGGAGGGGGA-GCCTATGAAC i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1854715 108 - 2187301 CTGCAGTACTTC-CATTTGATGAAATAATAAGTAGTTCTTTTTCA-AATGTTTTGGATTTCCCTGTAAAGCCCTAAGACACTGTTAACA--A-----------AAAAATAAAA-GGTTGAAAAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 623289 155 + 2414909 I e micMur3.chr32 1625773 397 - 9149476 I e rhiRox1.KN296641v1 1386258 237 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=380886.000000 s hg38.chrUn_KI270749v1 117519 25 + 158759 -AAAATTATTAAATTATGGTTTTAAT s panTro5.chr3 202004748 25 - 202621043 -AAAATTATTAAATTATGGTTTTAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772767 25 - 205426864 -AAAATTATTAAATTATGGTTTTAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3002 25 - 17846 -AAAATTATTAAATTATGGTTTTAAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591726 25 + 86207423 -AAAATTATTAAATTATGGTTATAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072893 25 + 204787373 -AAAATTATTAAATTATGGTTTTAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004741 25 - 192460366 -AAAATTATTAAATTATGGTTTTAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116987 25 - 17224310 -AAAATTATTAAATTATGGTTTTAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428881 25 - 41321030 -AAAATTATTAAATTATGGTTTTAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64500452 25 - 101219884 -AAAATTATTAAATTATGGTTTTAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 886320 25 - 924385 -aAAATTATTAAATTATGGTTTTAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727292 25 - 10587913 -AAAATTATTAAATTATGGTTTTAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062377 25 - 98464013 -AAAATTATTAAATTAAGGATTTAAC i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27734005 25 + 27742158 -aaaattattaaattaaggctttaat i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 271397 25 - 4835464 -AAAATTATTAAATTAAGGCTTTAAT i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3737381 25 + 4093027 -AAAATTATTAAATTAAGGCTTTAAT i aotNan1.NW_018502033v1 I 1 C 0 s proCoq1.NW_012148064v1 623444 25 + 2414909 -AAAATTATTAAATTAAGGTTTTAAT i proCoq1.NW_012148064v1 I 155 C 0 s otoGar3.GL873534 11073513 25 + 30473821 -AAAATTATTCAATCATGGTTTTAAT i otoGar3.GL873534 I 6 I 292 s mm10.chr6 45782170 24 - 149736546 -AAAATAACTTAATTA-GACTTTAAC i mm10.chr6 C 0 C 0 s canFam3.chr20 16608202 25 + 58134056 -GAAATGATTGAATAAAGGTTTAAAT i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1854823 26 - 2187301 AGTCATTATTGAATTAAGGTTTTAAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e micMur3.chr32 1625773 397 - 9149476 I e rhiRox1.KN296641v1 1386258 237 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=440281.000000 s hg38.chrUn_KI270749v1 117544 26 + 158759 AAAATCCATATATATGAATTTGGACA s panTro5.chr3 202004773 26 - 202621043 AAAATCCATATATATGAATTTGGACA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772792 26 - 205426864 AAAATCCATATATATGAATTTGGACA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3027 26 - 17846 AAAATCCATATATATGAATTTGGACA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591751 26 + 86207423 AAAATCCATATATGTGAATTTGGACA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072918 26 + 204787373 AAAATCCATATATGTGAATTTGGACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004766 26 - 192460366 AAAATCCATATATGTGAATTTGGACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117012 26 - 17224310 AAAATCCATATATGTGAATTTGGACA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428906 26 - 41321030 AAAATCCATATATGTGAATTTGGACA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64500477 26 - 101219884 AAAATCCATATATGTGAATTTGGACA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 886345 26 - 924385 AAAATCCATATATGTGAATTTGGACA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727317 26 - 10587913 AAAATCCATATATGTGAATTTGGACA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062402 26 - 98464013 AAAATCCATATATGTGAATTTGAACA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734030 26 + 27742158 aaaaaccatatatgtgaatttgaaca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271422 26 - 4835464 AAAAGCCATATATGTGAATTTGAACA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737406 26 + 4093027 AAAATCCATATATGTGAATTTGAACA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 623469 26 + 2414909 AAAATTCATGTATGTCAATTTGGACA i proCoq1.NW_012148064v1 C 0 I 225 s otoGar3.GL873534 11073830 26 + 30473821 aaaATTCATATATGTGAATTTGGACA i otoGar3.GL873534 I 292 C 0 s mm10.chr6 45782194 26 - 149736546 AAGATCCGTATAGGTGAATTTGGATA i mm10.chr6 C 0 C 0 s canFam3.chr20 16608227 26 + 58134056 AAAATCCATATATGTGAATTTGAaca i canFam3.chr20 C 0 I 16 s dasNov3.JH563077 1854849 26 - 2187301 Aatatccctctgtgtgaatgtggaca i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e micMur3.chr32 1625773 397 - 9149476 I e rhiRox1.KN296641v1 1386258 237 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=662963.000000 s hg38.chrUn_KI270749v1 117570 80 + 158759 CGTGTATACACAAGTAAAGTC-AGAGAAAATGACAGAATATA--ATGTATGTTGAAATTATAGCAATGACTAC----CACT-AAAAAA s panTro5.chr3 202004799 80 - 202621043 CGTGTATACACAAGTAAAGTC-AGAGAAAATGACAGAATATA--ATATATGTTGAAATGATAGCAATGACTAC----CACT-AAAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772818 81 - 205426864 CGTGTATACACAAGTAAAGTC-AGAGAAAATGACAGAATATA--ACGTATGTTGAAATGATAGCAATGACTAC----CACTAAAAAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3053 79 - 17846 CGTGTATACACAAGTAAAGTC-AGAGAAAATGACAGAATATA--ACGTATGTTGAAATGATAGCAATGACTAC----CACT--AAAAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591777 80 + 86207423 TGTGTATACACAAGTAAAGTC-AGAGAAAATAACAGAATATA--AGGTATGTTGAAATGATAGCAGTGATTAC----CACT-AAAAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072944 80 + 204787373 TGTGTATACACATGTAAAGTC-AGAGAAAATGACAGAATATA--ACGTATCTTGAAACGATTGCAATGATTAC----CACT-AAAAAA i rheMac8.chr2 C 0 I 2 s macFas5.chr2 61004792 80 - 192460366 TGTGTATACACATGTAAAGTC-AGAGAAAATGACAGAATATA--ACGTATCTTGAAACGATTGCAATGATTAC----CACT-AAAAAA i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11117038 80 - 17224310 TGTGTATACACATGTAAAGTC-AGAGAAAATGACAGAATATA--ACGTATCTTGAAACGATCGCAATGATTAC----CACT-AAAAAA i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17428932 80 - 41321030 TGTGTATACACATGTAAAGTC-AGAGAAAATGACAGAATACA--ACGTATGTTGAAACAATCGCAATGATTAC----CACT-AAAAAA i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64500503 80 - 101219884 TGTGTATACACATGTAAAGTC-AAAGAAAATGACAGAATATA--ACGTATGTTGAAACGATAGCAATGATTAC----CACT-AAAAAA i chlSab2.chr22 C 0 I 2 s manLeu1.NW_012098965v1 886371 80 - 924385 TGTGTATACACATGTAAAGTC-AGAGAAAATGACAGAATATA--ATGTATGTTGAAACAATCGCAATGATTAC----CACT-AAAAAA i manLeu1.NW_012098965v1 C 0 I 2 s colAng1.NW_012114711v1 6727343 80 - 10587913 TGTGTATACACATGTAAAGTC-AGAGAAAATGACAAAATATA--ACGCATGTTGAAACGATAGCAATGTTTAC----TACt-aaaaaa i colAng1.NW_012114711v1 C 0 I 2 s calJac3.chr15 46062428 64 - 98464013 CATGT-----------AAATC-AGAGAAAATGACAGAATAT---ATGTGTGTTGAAACAATAACAATGATTAC----GACT-AA---- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734056 63 + 27742158 catgt-----------aaatc--gagaaaatgacagaatgt---atgtgtgttgaaacaataacaatgattat----GACT-AA---- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271448 64 - 4835464 CATGT-----------AAATC-AGAGAAAATGACAGAATAT---ATGTGTGTTGAAACAATAACAATGATTAA----GACT-AC---- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737432 64 + 4093027 CATGT-----------AAATC-AGAGAAAATGACAGAATAT---ATGTGTGTTGAAACAATAACAATGattac----tact-aa---- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11073856 75 + 30473821 CGTATGCACACATGTATGTGC-ATAGACTATAGCAGAAATAA--ATACATACTAATACGATAGCAATGATTAC----ACCG-A----- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782220 83 - 149736546 --TATATAGACACCAAAAATCTATAAAAAATGACAGAAGAAATTTTGCACTATGTATAAACTAAAATGGTTATGTGACTCT-ATGG-- i mm10.chr6 C 0 I 1 s canFam3.chr20 16608269 76 + 58134056 tatacacacacaTTCAAATTC-TTATAAAATGATAGAAGAAA--ATAGGTATTAAAATGGTAACAGTGGTTAC----TACT-AA---- i canFam3.chr20 I 16 C 0 s dasNov3.JH563077 1854875 75 - 2187301 --catgtgcatatgcaaatgc-atagaaaatgatgggagaaa--atatatgc--aaaaaatgataatgattac----tact-gaaga- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 623495 225 + 2414909 I e micMur3.chr32 1625773 397 - 9149476 I e rhiRox1.KN296641v1 1386258 237 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=15561.000000 s hg38.chrUn_KI270749v1 117650 1 + 158759 A s panTro5.chr3 202004879 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772899 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3132 1 - 17846 A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591857 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073026 1 + 204787373 A i rheMac8.chr2 I 2 C 0 s macFas5.chr2 61004874 1 - 192460366 A i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11117120 1 - 17224310 A i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17429013 1 - 41321030 A i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64500585 1 - 101219884 A i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 886453 1 - 924385 A i manLeu1.NW_012098965v1 I 2 C 0 s colAng1.NW_012114711v1 6727425 1 - 10587913 a i colAng1.NW_012114711v1 I 2 C 0 s rhiRox1.KN296641v1 1386495 1 - 1467263 a i rhiRox1.KN296641v1 I 237 I 372 s calJac3.chr15 46062492 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734119 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271512 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737496 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11073931 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16608345 1 + 58134056 A i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 623495 225 + 2414909 I e mm10.chr6 45782303 1 - 149736546 I e micMur3.chr32 1625773 397 - 9149476 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I e dasNov3.JH563077 1854950 0 - 2187301 C a score=1318876.000000 s hg38.chrUn_KI270749v1 117651 135 + 158759 AATCAGAATAGAATGGTAATTTAAAATAAATATAAGACAGCAGTGGGCAGGATGAGGACACATTTAAATCTACATAATACTGCATTG-TGTAAGCTAAAT-----TTTTCAAGACCTGCTTGTGTAATTATTTTTAAAAAG s panTro5.chr3 202004880 135 - 202621043 AATCAGAATAGAATGGTAATTTAAAATAAATATAAGACAGCAGTGGGCAGGATGAGGACACATTTAAATCTACATAATACTGCACTG-TGTAAGCTAAAT-----TTTTCAAGACCTGCTTGTGTAATTATTTTTAAAAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772900 135 - 205426864 AATCAGAATAGAATGGTAATTTAAAATAAATATAAGACAGCAGTGGGCAGGATGAGGACACATTTAAATCTACATAATACTGCATTG-TGTAAGCTAAAT-----TTTTCAAGACCTGCTTGTGTAATTATTTTTAAAAAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3133 134 - 17846 AATCAGAATAGAATGGTAATTTAAAATAAATATAAGACAGCAGTGGGCAGGATGAGGACACATTTAAATCTACATAATACTGCATTG-TGTAAGCTAAAT-----TTTTCAAGACCTGCTTGTGTAATTA-TTTTAAAAAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591858 135 + 86207423 AATCAGAATAGAATGGTAATTTAAAATAAATATAAGAGAGCAGTGGGCAGGATGAGGACACATTTAAATCTACATAATACTGCATTG-TGTAAGCTAAAT-----TTTTCAAGACCTGCTTGTGTAACTATTTTTAAAAAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073027 134 + 204787373 AATCAAAA-AGAATGGGAATTTAAAATAAAAGTAAAAGAGCAGTGGGCAGGATGAGGACACGTTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTAGAAAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004875 135 - 192460366 AATCAAAATAGAATGGGAATTTAAAATAAAAGTAAAAGAGCAGTGGGCAGGATGAGGACACGTTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTAGAAAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117121 135 - 17224310 AATCAAAATAGAATGGGAATTTAAAATAAAAGTAAAAGAGCAGTGGGCAGGATGAGGACACGTTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTAGAAAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429014 135 - 41321030 AATCAAAATAGAATGAGAATTTTAAATAAAAGTAAGAGAGCAGTGGGCAGGATGCGGACACATTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTAGAAAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64500586 135 - 101219884 AATCAAAATACAATGGGAATTTAAAATAAAAGTAAGAGAGCAGTGGACAGGATGAGGACACATTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTACAAAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 886454 135 - 924385 AATCAAAATAGAATGAGAATTTAAAATAAAAGTAAGAGAGCAGTGGGCAGGATGCGGACACGTTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTAGAAAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727426 133 - 10587913 aataaaaatagaatgggaatttaaaataaaaGT--GAGAACAGTGGGCAGGATGAGGACACACTTAAATCTACATGATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTACCTGGGAAATTATTTTTAGAAAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062493 107 - 98464013 AATCAGAATAGAATTAGGATTTAAAGTAAAAGTAAGAGGGAAGTGGGCAGGATGGA----CACTTAAATCTATCTAATACTGCATCG-TGTATGGT-----------------------------AATTATTTTTAAAAAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734120 127 + 27742158 AATAAGAATAGAATTAGGATTTAAAGTAAAAGTAAGAGGGAAGTGGGCAGGATGGG----CACTTAA----ATCTAATACTGTATCA-TGTATGGTAAAT-----TATTCAAGACCTGCCTATGCAATTATTTTTAAAAAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271513 131 - 4835464 AATCAGAATAGAATTAGGATTTAAAGTAAAAGTAAGAGGGAAGTGGGCAGGATGGG----CATTTAAATCTATCTAATACTGTATCA-TGTATGGTAAAT-----TATTCAAGACCTGCCTATGTAATTATTTTTAAAAAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737497 131 + 4093027 aatcagaatagaattaagatttaaagtaaaagtaaGAGGGAAGTGGGCAGGATGGA----CGCTTAAATCTGTCTAATACTGCATCG-TGTATGGTAAAT-----TATTCAAGACCTGCCTATGTGATTATTTTTAAAAAG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11073932 140 + 30473821 GTTCAAAATAGGATAGAAATTTAAAATAGAAATGACAGAGTAGCTGGCAGAGGGGACACATTTCTAAGTCTATATAATGCTATATAG-TTTAAGCTCTATTATTATATTTAACTATTACCTGTGTCACTATTtttaaaaat i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782304 123 - 149736546 CATCAGAACGGAGATGGAAT-----GTGGAAATAAGAGGGCTGAGCGAGGAGCAGAGATACTTTTAACTCTGTAGTGTAGTGAATTG-TATA-------T-----GTCCCAAGAGTTGCCTGGGTGATTATGTTTGAAATG i mm10.chr6 I 1 C 0 s canFam3.chr20 16608346 128 + 58134056 GATCAGTACAG-------ATTTAAAATCAGACGAAGAGAACTATGGGGGGTGAGGGATTACTTTTAAATCTACACAATTCTACATTT-TTTCAGCTATAT-----TATTCAAGGATTGCTTGTGTAATTATTTTAAAAAAA i canFam3.chr20 C 0 I 14 s dasNov3.JH563077 1854950 121 - 2187301 -------TCAGAATTAAGGTTTAAAAAAGGAATAAGAGAAG-------GGGTTTTTATCACTTTTAAATCTACACAATTCTGCATCATTTTAAGCTATAT-----GATTTAACCACTGCC-ATGTAATTATTTTTCCAAAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 623495 225 + 2414909 I e micMur3.chr32 1625773 397 - 9149476 I e rhiRox1.KN296641v1 1386496 372 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=675660.000000 s hg38.chrUn_KI270749v1 117786 52 + 158759 AAAAAAG--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTAC s panTro5.chr3 202005015 52 - 202621043 AAAACAC--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTAC i panTro5.chr3 C 0 I 5 s panPan2.chr3 204773035 52 - 205426864 AAAACAG--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTAC i panPan2.chr3 C 0 I 5 s gorGor5.CYUI01007532v1 3267 52 - 17846 AAAACAG--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591993 52 + 86207423 AAAACAG--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACACGGAAAGTGCTAC i nomLeu3.chr21 C 0 I 5 s rheMac8.chr2 66073161 59 + 204787373 AAAACAG--------GTTTGTTTCC----TTGTGTTGACAATTATTCAACTATTCAACAT-GAAAGTGCTAC i rheMac8.chr2 C 0 I 5 s macFas5.chr2 61005010 59 - 192460366 AAAACAG--------GTTTGTTTCC----TTGTGTTGACAATTATTCAACTATTCAACAT-GAAAGTGCTAC i macFas5.chr2 C 0 I 5 s macNem1.NW_012018021v1 11117256 59 - 17224310 AAAACAG--------GTTTGTTTCC----TTGTGTTGACAATTATTCAACTATTCAACAT-GAAAGTGCTAC i macNem1.NW_012018021v1 C 0 I 5 s cerAty1.NW_012009469v1 17429149 51 - 41321030 AAAAGAG--------GTTTGTTTCC----TTGTGTTGACAAT--------TATTCAACAT-GAAAGTGTTAC i cerAty1.NW_012009469v1 C 0 I 5 s chlSab2.chr22 64500721 51 - 101219884 AAAACAG--------GTTTGTTTCC----TTGTGTTGACAGT--------TATTCAACAT-GAAAGTGCTAC i chlSab2.chr22 C 0 I 5 s manLeu1.NW_012098965v1 886589 51 - 924385 AAAACAG--------GTTTGTTTCC----TTGTGTTGACAAT--------TATTCAACAT-GAAAGTGCTAC i manLeu1.NW_012098965v1 C 0 I 5 s colAng1.NW_012114711v1 6727559 51 - 10587913 AAAACAG--------GTTTGTTTCC----TTGTGTTGACAAT--------GATTCAACAT-GAGAGTGCTAC i colAng1.NW_012114711v1 C 0 I 5 s calJac3.chr15 46062600 52 - 98464013 AAAACAT--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTAC i calJac3.chr15 C 0 I 5 s saiBol1.JH378125 27734247 52 + 27742158 AAAACAT--------GTTTGCTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTAC i saiBol1.JH378125 C 0 I 5 s cebCap1.NW_016107467v1 271644 52 - 4835464 AAAACAT--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAATTGCTAC i cebCap1.NW_016107467v1 C 0 I 5 s aotNan1.NW_018502033v1 3737628 51 + 4093027 AAAACAT--------GTTTGTTTCC-----TGTATTGAGAAT--------TATTCAACATGGAAAGTGCTAC i aotNan1.NW_018502033v1 C 0 I 5 s micMur3.chr32 1626170 52 - 9149476 AAAAGAG--------GTTTGTTTCT----TTGCTTTGAGAAT--------TATTTAAAATGGAAAGAGCTAC i micMur3.chr32 I 397 I 58 s proCoq1.NW_012148064v1 623720 52 + 2414909 AAAATAG--------GTTGGTTTCA----TTGTTTTGAGAAT--------TATTTAAAATGGAAAGTGCTAC i proCoq1.NW_012148064v1 I 225 I 51 s otoGar3.GL873534 11074072 51 + 30473821 aaaaaag--------gattctcttt----ttg-gggggtaat--------tacttaaaatggcaagtgctac i otoGar3.GL873534 C 0 I 5 s mm10.chr6 45782427 39 - 149736546 --AAACT--------ATGGGTTCTC----TCA-----AAAAT--------TATTCAACATGGAAAA------ i mm10.chr6 C 0 C 0 s canFam3.chr20 16608488 56 + 58134056 AACACAA--------GTTTGTCTGCCTTTTTGTTGTAAGAAC--------CATCTCACATGGAAAGTGCTGC i canFam3.chr20 I 14 C 0 s dasNov3.JH563077 1855071 60 - 2187301 AAACCAAgtttgtttgtttgtttct----ttgtttTGAGATT--------TACCCAACATGGAATGTGCTAC i dasNov3.JH563077 C 0 I 5 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e rhiRox1.KN296641v1 1386496 372 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=316581.000000 s hg38.chrUn_KI270749v1 117838 34 + 158759 AGAAGAGAGAGCTCATTGACTC---CATTTGTTCTAA s panTro5.chr3 202005072 34 - 202621043 AGAAGAGAGAGCTCATTGACTC---CATTTGTTCTaa i panTro5.chr3 I 5 C 0 s panPan2.chr3 204773092 34 - 205426864 AGAAGAGAGAGCTCATTGACTC---CATTTGTTCTaa i panPan2.chr3 I 5 C 0 s gorGor5.CYUI01007532v1 3319 34 - 17846 AGAAGAGAGAGCTCATTGACTC---CATTTGTTCTaa i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592050 34 + 86207423 AGAAGAGAGAGCTCACTGACTC---TATTTGTTCTAA i nomLeu3.chr21 I 5 C 0 s rheMac8.chr2 66073225 33 + 204787373 AGAAGAGAGAGCTCATTGACTC---CATTTGTTCTA- i rheMac8.chr2 I 5 C 0 s macFas5.chr2 61005074 33 - 192460366 AGAAGAGAGAGCTCATTGACTC---CATTTGTTCTA- i macFas5.chr2 I 5 C 0 s macNem1.NW_012018021v1 11117320 33 - 17224310 AGAAGAGAGAGCTCATTGACTC---CATTTGTTCTA- i macNem1.NW_012018021v1 I 5 C 0 s cerAty1.NW_012009469v1 17429205 33 - 41321030 AGAAGAGAGAGCTCATTGACTC---CATTTATTCTA- i cerAty1.NW_012009469v1 I 5 C 0 s chlSab2.chr22 64500777 33 - 101219884 AGAAGAAAGAGCTCATTGACTC---CATTTGTTCTA- i chlSab2.chr22 I 5 C 0 s manLeu1.NW_012098965v1 886645 33 - 924385 AGAAGAGAGAGCTCATTGACTC---CATTTATTCTA- i manLeu1.NW_012098965v1 I 5 C 0 s colAng1.NW_012114711v1 6727615 33 - 10587913 AGAAGAGAGAGCGCATTGACTC---CATTTGTTCTA- i colAng1.NW_012114711v1 I 5 C 0 s calJac3.chr15 46062657 32 - 98464013 AGAAGAGAGAGCTCAATGACTC---CATTTGTTCT-- i calJac3.chr15 I 5 C 0 s saiBol1.JH378125 27734304 27 + 27742158 AG----GAGAGCTCAGTGACTC---CATTTGCTC--- i saiBol1.JH378125 I 5 C 0 s cebCap1.NW_016107467v1 271701 32 - 4835464 AGAAGAGAGAGCTCAATGACTC---CATTTGTTCC-- i cebCap1.NW_016107467v1 I 5 C 0 s aotNan1.NW_018502033v1 3737684 33 + 4093027 AGAAGAGAGAGCTCAATGACTC---CATTTGTTCTa- i aotNan1.NW_018502033v1 I 5 C 0 s otoGar3.GL873534 11074128 29 + 30473821 agagaagggaGCTCACTG-------CATCTGTTCAA- i otoGar3.GL873534 I 5 C 0 s mm10.chr6 45782466 14 - 149736546 --------------ATTGCATG---CATGTG------ i mm10.chr6 C 0 C 0 s canFam3.chr20 16608544 27 + 58134056 ----CTGAGAGCTCATGGACT-----ATTTATTCTC- i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1855136 34 - 2187301 AGAGCAGAGAGTTCACTGATTCTCTTGTTTATTC--- i dasNov3.JH563077 I 5 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 623772 51 + 2414909 I e micMur3.chr32 1626222 58 - 9149476 I e rhiRox1.KN296641v1 1386496 372 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 184354 861 + 958716 I a score=180.000000 s hg38.chrUn_KI270749v1 117872 1 + 158759 T s tarSyr2.KE939134v1 185215 1 + 958716 c i tarSyr2.KE939134v1 I 861 I 1715 s otoGar3.GL873534 11074157 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16608572 1 + 58134056 T i canFam3.chr20 I 1 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 623772 51 + 2414909 I e mm10.chr6 45782480 0 - 149736546 C e micMur3.chr32 1626222 58 - 9149476 I e rhiRox1.KN296641v1 1386496 372 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e gorGor5.CYUI01007532v1 3353 0 - 17846 C e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e manLeu1.NW_012098965v1 886678 0 - 924385 C e macNem1.NW_012018021v1 11117353 0 - 17224310 C e rheMac8.chr2 66073258 0 + 204787373 C e aotNan1.NW_018502033v1 3737717 0 + 4093027 C e cebCap1.NW_016107467v1 271733 0 - 4835464 C e dasNov3.JH563077 1855170 0 - 2187301 C e saiBol1.JH378125 27734331 0 + 27742158 C e calJac3.chr15 46062689 0 - 98464013 C e colAng1.NW_012114711v1 6727648 0 - 10587913 C e chlSab2.chr22 64500810 0 - 101219884 C e cerAty1.NW_012009469v1 17429238 0 - 41321030 C e macFas5.chr2 61005107 0 - 192460366 C e nomLeu3.chr21 67592084 0 + 86207423 C e panPan2.chr3 204773126 0 - 205426864 C e panTro5.chr3 202005106 0 - 202621043 C a score=118014.000000 s hg38.chrUn_KI270749v1 117873 56 + 158759 Aaaacaaacaaacaagcaaca-------aaaaacCCTATATATTTTATACAAGTAGAAACCCT s panTro5.chr3 202005106 55 - 202621043 aaaacaaacaaacaagcaac--------aaaAACCCTATATATTTTATACAAGTAGAAACCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773126 56 - 205426864 aaaacaaacaaacaagcaaca-------aaaaacCCTATATATTTTATACAAGTAGAAACCCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3353 56 - 17846 aaaaaaaacaaacaagcaaca-------aaaaacCCTATATATTTTATACAAGTAGAAACCCT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592084 54 + 86207423 AAAACAAACAAGCGACCAA---------AAAAACCCTAAATATTTTATACAAGTAGAAACCCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073258 39 + 204787373 AAAACAAACAAACACACACC--------AAAAAACCTACATATTTTA---------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005107 39 - 192460366 AAAACAAACAAACACACACC--------AAAAAACCTACATATTTTA---------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117353 39 - 17224310 AAAACAAACAAACACACACC--------AAAAAACCTACATATTTTA---------------- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429238 39 - 41321030 Aaaacaaacaaacaaacacc--------aaaaaacCTACATATTTTA---------------- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64500810 39 - 101219884 AAAACAAACAAACAAACACC--------AGAAAACCTACACATTTTA---------------- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 886678 39 - 924385 Aaaacaaacaaacaaacacc--------aaaaaacCTACATATTTTA---------------- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727648 39 - 10587913 Aaaacaaacaaacaaacacc--------aaaaaacCTACATATTTTA---------------- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062689 33 - 98464013 AAAAAAAAAA------------------AAAAAAGCTGTACGTTTTATAAA------------ i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734331 29 + 27742158 ----AAAAAA------------------AAAAAAGCTATATATTTTATAAA------------ i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271733 33 - 4835464 AAAAAAAAAA------------------AAAAAAGCTATATATTTTATAAA------------ i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737717 33 + 4093027 aaaaaaaaaa------------------aaaaaaGCTATATGTTTTATAAG------------ i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11074158 17 + 30473821 --------------------TTTCCTAAAAAAATCCC-------------------------- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782480 28 - 149736546 ---------------------------GGGAAATGTTCTCTGTTTTAGAAGCATT-------- i mm10.chr6 C 0 I 1 s canFam3.chr20 16608573 9 + 58134056 ----------------------------AAAAACTCT-------------------------- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855170 31 - 2187301 ------------------------CTTGAAAAAATCT----ATTTCATGCAGGTAGAAA---- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 623772 51 + 2414909 I e micMur3.chr32 1626222 58 - 9149476 I e rhiRox1.KN296641v1 1386496 372 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=15780.000000 s hg38.chrUn_KI270749v1 117929 10 + 158759 ATATATTTTA s panTro5.chr3 202005161 10 - 202621043 ATATATTTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773182 10 - 205426864 ATATATTTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3409 10 - 17846 ATATATTTTA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592138 10 + 86207423 ATATATTTTA i nomLeu3.chr21 C 0 C 0 s proCoq1.NW_012148064v1 623823 10 + 2414909 ATATATTTCC i proCoq1.NW_012148064v1 I 51 C 0 s otoGar3.GL873534 11074175 10 + 30473821 AGATAGTCCC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782509 9 - 149736546 ATCCATTTC- i mm10.chr6 I 1 C 0 s canFam3.chr20 16608582 10 + 58134056 ATATATTCTC i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e micMur3.chr32 1626222 58 - 9149476 I e rhiRox1.KN296641v1 1386496 372 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e manLeu1.NW_012098965v1 886717 0 - 924385 C e macNem1.NW_012018021v1 11117392 0 - 17224310 C e rheMac8.chr2 66073297 0 + 204787373 C e aotNan1.NW_018502033v1 3737750 0 + 4093027 C e cebCap1.NW_016107467v1 271766 0 - 4835464 C e dasNov3.JH563077 1855201 0 - 2187301 C e saiBol1.JH378125 27734360 0 + 27742158 C e calJac3.chr15 46062722 0 - 98464013 C e colAng1.NW_012114711v1 6727687 0 - 10587913 C e chlSab2.chr22 64500849 0 - 101219884 C e cerAty1.NW_012009469v1 17429277 0 - 41321030 C e macFas5.chr2 61005146 0 - 192460366 C a score=1499338.000000 s hg38.chrUn_KI270749v1 117939 114 + 158759 TACAAGTAGAAATAACTAGC--AATATA-TTTCTATAGGGAGAAATAAGCCAGCATATTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG s panTro5.chr3 202005171 114 - 202621043 TACAAGTAGAAATAACTAGC--AATATA-TTTCTATAGGGAGAAATAAGCCAGCATATTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773192 114 - 205426864 TACAAGTAGAAATAACTAGC--AATATA-TTTCTATAGGGAGAAATAAGCCAGCATATTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3419 114 - 17846 TACAAGTAGAAATAACTAGC--AATATA-TTTCTATAGGGAGAAATAAGCCAGCATATTTTCAACGTTCTTAAGATTTTATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592148 114 + 86207423 TACGACTATAAATAACTAGT--AATATA-TTTCTATAGGGAGAAAGAAGCCAGTATATTTTCAACATTCTTAAGATTTCATTTCTATAGCAAATAAAA-CAAGGCAAAGCCAATATTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073297 110 + 204787373 ----AGTACAAATAACTAGT--AATATA-TTTCTATAGGGAGAAATAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATACTG i rheMac8.chr2 C 0 I 4 s macFas5.chr2 61005146 110 - 192460366 ----AGTACAAATAACTAGT--AATATA-TTTCTATAGGGAGAAATAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATACTG i macFas5.chr2 C 0 I 4 s macNem1.NW_012018021v1 11117392 110 - 17224310 ----AGTACAAATAACTAGT--AATATA-TTTCTATAGGGAGAAATAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATACTG i macNem1.NW_012018021v1 C 0 I 16 s cerAty1.NW_012009469v1 17429277 110 - 41321030 ----AGTAGAAATAACTAGT--AATATA-TTTCTACAGGGAGAAATAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG i cerAty1.NW_012009469v1 C 0 I 4 s chlSab2.chr22 64500849 110 - 101219884 ----AGTAGAAATAACTAGT--AATATA-TTTCTATAGGGAGAAATAAGCCAGTATGTTTTCAACGTTTTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATACTG i chlSab2.chr22 C 0 I 48 s manLeu1.NW_012098965v1 886717 110 - 924385 ----AGTAGAAATAACTAGT--AATATA-TTTCTATAGGGAGAAATAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG i manLeu1.NW_012098965v1 C 0 I 4 s colAng1.NW_012114711v1 6727687 110 - 10587913 ----AGTAGAAATAACTAGT--AGTATA-TTTCTATAGGGAGAAACAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG i colAng1.NW_012114711v1 C 0 I 4 s calJac3.chr15 46062722 102 - 98464013 ----AGTAGAAATAGTTAGT--AATATA-TACCTATAGGGAGAAACGAGCCAGTTTATTTTAAACTTTCTTAAGGTTTAATTTGTAAAGCAAATAAAA-CAAGGCAAAGC-------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734360 102 + 27742158 ----AGTAGAAATATTTAGT--AATATA-TACCTACAGGGAGAAATGAGCAAGTTTATTTTAAACGTTCTTAAGGTTTAATTTGTAAAGCAAATGAAA-CAAGGCAAAGC-------- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271766 98 - 4835464 ----AGTAGAAA----TAGA--AATATA-TACCTATACGGATAAATGAGCCAGTTTATTTTAAACGTTCTTAAGGTTTAATTTGTAAAGCAAATAAAA-CAAGGCAAAGC-------- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737750 98 + 4093027 ----AGTAGAAA----TAGT--AATATA-TACCTATAGGGAGAAATGAGCCAGTTTATTTTAAACGTTCTTAAGGTTTAATTTGTAAAGCAAATAAAA-CAAGGCAAAGC-------- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1626280 114 - 9149476 TACAAGCAAAAATACCTAGC--AATGTA-TATCTATAGGGGAAAATGAGCTAGTGCATTCTGAATATTCTTAAGACTTCATTCGTAAAGCAAATAACA-TAAGTCTAAGCCAATATTG i micMur3.chr32 I 58 C 0 s proCoq1.NW_012148064v1 623833 114 + 2414909 TACAAGTAAAAATACCTAGC--AATCTA-TATCTATAGGGGAAAATGAGCTAGTACATTTTGAATGTTCTTAAGATTTCATTTGTAAAGCAAATAAAA-TAAGGCTAAGCCAATATTG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11074185 115 + 30473821 AACAGGTGAAAATAGATAGC--TATGTATTATCTATAGGAGACAAGGCTCTGGAACGTTTTGAATGTTCTTAAGTTTTCACATGTAAAGCAGAGAAAA-CAAGGCTAAGCCAATATTA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782518 115 - 149736546 CACAAGTTGGAAGAATTAGC--ATCATG-TATTTAAAGAAGGAAGTGAGCTGGCACATTCTCACTGTTTTTAGGATTTTATTTGTTAAGCAAGAAAAACCAACACTGAGTAAATATTA i mm10.chr6 C 0 C 0 s canFam3.chr20 16608592 101 + 58134056 ----------CACAACTAGA--AATAGG-TA--TATGTGTGAAAATGAGCTGCTATATTTTGAATGTTCTTAAGATTTTATTTATAAAGTAAATAAA--CAAGGCTAAGCCAATATTG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855201 102 - 2187301 --------AAAAAAACTAGCAAAATATA-TTTACATAGGGGAAAATGAGCTTGTGCATTTTGAATGTGCTTGAACTTACTTT------GCAAATAAAA-CAAGGCTAAGCCAATAATG i dasNov3.JH563077 C 0 I 9 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e rhiRox1.KN296641v1 1386496 372 - 1467263 I e papAnu3.chr2 59564247 907 + 187378091 I e nasLar1.chr2 57735445 891 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1240243 895 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=-5705.000000 s hg38.chrUn_KI270749v1 118053 1 + 158759 -T s panTro5.chr3 202005285 1 - 202621043 -T i panTro5.chr3 C 0 I 9 s panPan2.chr3 204773306 1 - 205426864 -G i panPan2.chr3 C 0 I 19 s gorGor5.CYUI01007532v1 3533 1 - 17846 -T i gorGor5.CYUI01007532v1 C 0 I 7 s nomLeu3.chr21 67592262 1 + 86207423 -T i nomLeu3.chr21 C 0 I 5 s rheMac8.chr2 66073411 1 + 204787373 -t i rheMac8.chr2 I 4 C 0 s macFas5.chr2 61005260 1 - 192460366 -t i macFas5.chr2 I 4 C 0 s macNem1.NW_012018021v1 11117518 1 - 17224310 -t i macNem1.NW_012018021v1 I 16 C 0 s cerAty1.NW_012009469v1 17429391 1 - 41321030 -t i cerAty1.NW_012009469v1 I 4 C 0 s papAnu3.chr2 59565154 1 + 187378091 -C i papAnu3.chr2 I 907 I 1543 s manLeu1.NW_012098965v1 886831 1 - 924385 -t i manLeu1.NW_012098965v1 I 4 C 0 s nasLar1.chr2 57736336 1 + 181502896 -C i nasLar1.chr2 I 891 I 1549 s colAng1.NW_012114711v1 6727801 1 - 10587913 -t i colAng1.NW_012114711v1 I 4 I 8 s rhiBie1.NW_016820128v1 1241138 1 - 2311269 -T i rhiBie1.NW_016820128v1 I 895 C 0 s micMur3.chr32 1626394 1 - 9149476 -G i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 623947 1 + 2414909 -T i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11074300 1 + 30473821 -T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782633 1 - 149736546 -C i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1855312 1 - 2187301 G- i dasNov3.JH563077 I 9 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e rhiRox1.KN296641v1 1386496 372 - 1467263 I e ponAbe2.chr3 69661518 1640 + 202140232 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e aotNan1.NW_018502033v1 3737848 0 + 4093027 C e cebCap1.NW_016107467v1 271864 0 - 4835464 C e canFam3.chr20 16608693 0 + 58134056 C e saiBol1.JH378125 27734462 0 + 27742158 C e calJac3.chr15 46062824 0 - 98464013 C e chlSab2.chr22 64500959 48 - 101219884 I a score=35737.000000 s hg38.chrUn_KI270749v1 118054 6 + 158759 AAAAAA- s panTro5.chr3 202005295 6 - 202621043 aaaaaa- i panTro5.chr3 I 9 C 0 s panPan2.chr3 204773326 6 - 205426864 aaaaaa- i panPan2.chr3 I 19 C 0 s gorGor5.CYUI01007532v1 3541 6 - 17846 AAAAAA- i gorGor5.CYUI01007532v1 I 7 C 0 s nomLeu3.chr21 67592268 6 + 86207423 AAAAAA- i nomLeu3.chr21 I 5 C 0 s rheMac8.chr2 66073412 5 + 204787373 -aaata- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005261 5 - 192460366 -aaata- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117519 5 - 17224310 -aaata- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429392 5 - 41321030 -aaata- i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 886832 5 - 924385 -aaata- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727810 5 - 10587913 -aaata- i colAng1.NW_012114711v1 I 8 I 8 s rhiRox1.KN296641v1 1386868 5 - 1467263 -CAATa- i rhiRox1.KN296641v1 I 372 I 824 s rhiBie1.NW_016820128v1 1241139 5 - 2311269 -AAATa- i rhiBie1.NW_016820128v1 C 0 I 20 s micMur3.chr32 1626395 6 - 9149476 AAGAAA- i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 623948 6 + 2414909 AAGAAA- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11074301 6 + 30473821 AAGAAA- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782634 6 - 149736546 AGAAAA- i mm10.chr6 C 0 C 0 s canFam3.chr20 16608693 6 + 58134056 AAAAGG- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855313 6 - 2187301 -AAAAGC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e aotNan1.NW_018502033v1 3737848 0 + 4093027 C e cebCap1.NW_016107467v1 271864 0 - 4835464 C e saiBol1.JH378125 27734462 0 + 27742158 C e calJac3.chr15 46062824 0 - 98464013 C e chlSab2.chr22 64500959 48 - 101219884 I a score=42222.000000 s hg38.chrUn_KI270749v1 118060 7 + 158759 AATTAAT s panTro5.chr3 202005301 7 - 202621043 aaTTAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773332 7 - 205426864 aCTTAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3547 7 - 17846 AATTAAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592274 7 + 86207423 AATTAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073417 6 + 204787373 -aataaa i rheMac8.chr2 C 0 I 8 s macFas5.chr2 61005266 6 - 192460366 -aataaa i macFas5.chr2 C 0 I 8 s macNem1.NW_012018021v1 11117524 6 - 17224310 -aataaa i macNem1.NW_012018021v1 C 0 I 8 s cerAty1.NW_012009469v1 17429397 6 - 41321030 -aataaa i cerAty1.NW_012009469v1 C 0 I 8 s manLeu1.NW_012098965v1 886837 6 - 924385 -aataaa i manLeu1.NW_012098965v1 C 0 I 8 s colAng1.NW_012114711v1 6727823 6 - 10587913 -aGCAAA i colAng1.NW_012114711v1 I 8 C 0 s rhiBie1.NW_016820128v1 1241164 6 - 2311269 -aacaaa i rhiBie1.NW_016820128v1 I 20 C 0 s micMur3.chr32 1626401 7 - 9149476 AATTAAA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 623954 7 + 2414909 AATTAAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11074307 7 + 30473821 AATTAAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782640 6 - 149736546 ACCTAA- i mm10.chr6 C 0 C 0 s canFam3.chr20 16608699 7 + 58134056 AATTAAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855319 7 - 2187301 AATTAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e aotNan1.NW_018502033v1 3737848 0 + 4093027 C e cebCap1.NW_016107467v1 271864 0 - 4835464 C e saiBol1.JH378125 27734462 0 + 27742158 C e calJac3.chr15 46062824 0 - 98464013 C e chlSab2.chr22 64500959 48 - 101219884 I a score=12637.000000 s hg38.chrUn_KI270749v1 118067 1 + 158759 C s panTro5.chr3 202005308 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773339 1 - 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3554 1 - 17846 C i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592281 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073431 1 + 204787373 C i rheMac8.chr2 I 8 C 0 s macFas5.chr2 61005280 1 - 192460366 C i macFas5.chr2 I 8 C 0 s macNem1.NW_012018021v1 11117538 1 - 17224310 C i macNem1.NW_012018021v1 I 8 C 0 s cerAty1.NW_012009469v1 17429411 1 - 41321030 C i cerAty1.NW_012009469v1 I 8 C 0 s chlSab2.chr22 64501007 1 - 101219884 C i chlSab2.chr22 I 48 C 0 s manLeu1.NW_012098965v1 886851 1 - 924385 C i manLeu1.NW_012098965v1 I 8 C 0 s colAng1.NW_012114711v1 6727829 1 - 10587913 C i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1241170 1 - 2311269 T i rhiBie1.NW_016820128v1 C 0 I 1516 s micMur3.chr32 1626408 1 - 9149476 C i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 623961 1 + 2414909 C i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11074314 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782646 1 - 149736546 C i mm10.chr6 C 0 C 0 s canFam3.chr20 16608706 1 + 58134056 C i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855326 1 - 2187301 C i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e aotNan1.NW_018502033v1 3737848 0 + 4093027 C e cebCap1.NW_016107467v1 271864 0 - 4835464 C e saiBol1.JH378125 27734462 0 + 27742158 C e calJac3.chr15 46062824 0 - 98464013 C a score=1026877.000000 s hg38.chrUn_KI270749v1 118068 81 + 158759 CTAAGT-CTAC-ATGAACTTAGCTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACATTTAAAATTTT s panTro5.chr3 202005309 81 - 202621043 CTAAGT-CTAC-ATGAACTTAGCTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACATTTAAAATTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773340 83 - 205426864 CTAAGTACTACAATGAACTTAGCTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACATTTAAAATTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3555 81 - 17846 CTAAGT-CTAC-ATGAACTTAGCTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACATTTAAAATTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592282 81 + 86207423 CTAAGT-CTAC-ATGAACTTAGCTGGGTACCAGTTGAGATATTTGAAGTTAAT-CTACCCTGTAGTCTTCACATTTAAAATTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073432 81 + 204787373 CTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005281 81 - 192460366 CTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117539 81 - 17224310 CTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429412 81 - 41321030 CTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501008 81 - 101219884 CTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 886852 81 - 924385 CTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAC-CTACCCTGTAGTCCTCACACCTAAAATTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727830 81 - 10587913 CTAAGT-CAAC-ATGAACTTAGTTGGGTGCCAGTCGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062824 62 - 98464013 --------------------AG-TGGGTACCattttaaatatttaaattttat-CTACCCTGTAGTCTTCCCAGTTAAAATTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734462 63 + 27742158 --------------------AGTTGGGTACCAGTTGAAATATTTGAATTTTAT-CTACCCTGTAATCCTCCCATTTAAAATTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271864 63 - 4835464 --------------------AGTTGGGTACCCGTTGAAATATTTGAATTTTAT-CTGCCTTGTAGTCCTCCCATTTAAAATTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737848 63 + 4093027 --------------------AGTTGGATACCAGTTGAAATATTTAAATTTTAT-CTACCCTGTAGTCCTCCCATTTAAAATTTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1626409 81 - 9149476 CTAAGT-AAAC-ATTAATTAAGTTAGGTACCAGTTAAGATACCTGAATTGTAT-CTGCCCCATAGTCTACACATTTAAAATTTT i micMur3.chr32 C 0 I 202 s proCoq1.NW_012148064v1 623962 81 + 2414909 CTAAGT-AAAC-ATTAATTAAGTTGGGTACCAGTTAGGATATCCAAATTTTAT-CTGCCCCATAGTCTACACCTTTAAAATTTT i proCoq1.NW_012148064v1 C 0 I 3 s otoGar3.GL873534 11074315 80 + 30473821 CTAAGT-CAAC-ATGAATTGACTTGGGTACCACTTGAGATATTTG-ATTTGAT-CTGAGCCATAGTCTGCACACTTAAAATTTT i otoGar3.GL873534 C 0 I 3 s mm10.chr6 45782647 82 - 149736546 CTTAGT-TTGC-ATTAATTTACTTGAGTGCTGGCTGAAATGTTTGTACTCTGTGGTATTTTGTTGTCATCAGAGTTGGAACCTT i mm10.chr6 C 0 I 3 s canFam3.chr20 16608707 81 + 58134056 TTAAGT-CAGC-ATTAATTTAGTTGTGTACACTTTGCAATATTTGTATTTTAT-CTGCCCTATCATCCTCACATTTAAAATGTT i canFam3.chr20 C 0 I 3 s dasNov3.JH563077 1855327 80 - 2187301 CTATGT-CAGC-ATTTATTTAG-TGAGTACAACCTGAGATATATGTATTCTAT-CTGCTCTATAGGCCTCACATTTACAATTTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=810645.000000 s hg38.chrUn_KI270749v1 118149 59 + 158759 TCTCAATAGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAG s panTro5.chr3 202005390 59 - 202621043 TCTCAATAGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773423 58 - 205426864 TCTCAATAGTTGAATGTAAG-TATTTACTTCTGGATTGAACAATAAAATGTAAATGGAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3636 59 - 17846 TCTCAATAGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592363 59 + 86207423 TCTCAGTAGTTGAATGTAAGTTATTTACTTCTAGATTGAACAATAAAATGTAAATGGAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073513 59 + 204787373 TCTCAATCGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005362 59 - 192460366 TCTCAATCGTTGAATGTAAGTTATTTACTTCTGGATTGAAAAATAAAATGTAAATGGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117620 59 - 17224310 TCTCAATCGTTGAATGTAAGTTATTTACTTCTGGATTGAAAAATAAAATGTAAATGGAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429493 59 - 41321030 TCTCAATCGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501089 59 - 101219884 TCTCAATAGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 886933 59 - 924385 TCTCAATCGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727911 59 - 10587913 TCTCAATAGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062886 59 - 98464013 TCTTAATCTTTGAATATAAGTTATTTATTTCTGGATTAAACAATAAAATGTAAATGGAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734525 59 + 27742158 TCTTAATCTTTGAATGTAAGTTATTTATTTCTGGATCAAACAATAAAATGTAAATGGAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271927 59 - 4835464 TCTTAATCTTTGAATGTAAGTTATTTATTTCTGGATCAAACAATAAAATGTAAATGGAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737911 59 + 4093027 TCTTAATCTTTGAATGTAAGTTATTTATTTCTGGATCAAACAATAAAATGTAAATGGAG i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 624046 59 + 2414909 CCTCAACAGTTTAGCCTAAATTATTTACTTCTTGATGGAACAATAACATGCAAATGGAG i proCoq1.NW_012148064v1 I 3 I 57 s otoGar3.GL873534 11074398 49 + 30473821 CCTCAAAGGT----------TTATTTACTTCTTGGTGAAACAATAAAATGCAAATGGAG i otoGar3.GL873534 I 3 C 0 s mm10.chr6 45782732 59 - 149736546 TTTCAACAACTTACTTTAAATAATGGACTTGCTGATGGAATGGTAGAATATACATGAAA i mm10.chr6 I 3 I 6 s canFam3.chr20 16608791 59 + 58134056 CCTCAACAGTTTAGTGTTAGGTATATATTTACTGTTGGAACAAGGAAATGCAAATGGAG i canFam3.chr20 I 3 C 0 s dasNov3.JH563077 1855407 59 - 2187301 CCTCAGTACTTTACTGTAAGTTATTCATATAGTGATGGAGCAATGAAATCCAAATGGAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=234494.000000 s hg38.chrUn_KI270749v1 118208 16 + 158759 GTTTCCAGGAAGATGA s panTro5.chr3 202005449 16 - 202621043 GTTTccaggaagatga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773481 16 - 205426864 GTTTCCAGGAAGATGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3695 16 - 17846 GTTTCCAGGAAGATGA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592422 16 + 86207423 GCTTCCAGGAAGAGGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073572 16 + 204787373 GTTTCCAGGAAGATGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005421 16 - 192460366 GTTTCCAGGAAGATGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117679 16 - 17224310 GTTTCCAGGAAGATGA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429552 16 - 41321030 GTTTCCAGGAAGATGA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501148 16 - 101219884 GTTTCCAGGAAGATGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 886992 16 - 924385 GTTTCCAGGAAGATGA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727970 16 - 10587913 GTTTCCAGGAAGATGA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062945 16 - 98464013 GTTTCCAGGAAGATGA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734584 16 + 27742158 GTTTCCAGGAAGACGA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271986 16 - 4835464 ATTTCCAGGAAGATGA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737970 16 + 4093027 GTTTCCAGGAAGACGA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11074447 16 + 30473821 TTTTCCAGGAAGATGA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782797 16 - 149736546 TTATATATAAAGATAA i mm10.chr6 I 6 C 0 s canFam3.chr20 16608850 16 + 58134056 GTTTCCAGGAAGATGA i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1855466 16 - 2187301 ATTTCCAGGAGATGGA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=159168.000000 s hg38.chrUn_KI270749v1 118224 12 + 158759 ATTGAGTGTGCC s panTro5.chr3 202005465 12 - 202621043 actgagtgtgcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773497 12 - 205426864 ACTGAGTGTGCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3711 12 - 17846 ATTGAGTGTGCC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592438 12 + 86207423 ATTGAGCGTGCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073588 12 + 204787373 ATTGAGTGTGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005437 12 - 192460366 ATTGAGTGTGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117695 12 - 17224310 ATTGAGTGTGCC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429568 12 - 41321030 ATTGAGTGTGCC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501164 12 - 101219884 ATTGAGTGTGCC i chlSab2.chr22 C 0 I 14 s manLeu1.NW_012098965v1 887008 12 - 924385 ATTGAGTGTGCC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727986 12 - 10587913 ATTGAGTGTGCC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062961 12 - 98464013 ATTAAGTGTGCC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734600 12 + 27742158 ATTGAGTGTGCC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272002 12 - 4835464 ATTGAGTGTGCC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737986 12 + 4093027 ATTGAGTGTGCC i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45782813 12 - 149736546 AGTGAGGATGCC i mm10.chr6 C 0 C 0 s canFam3.chr20 16608867 12 + 58134056 ATGGAGTGTGCC i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1855482 12 - 2187301 AAGGAGTTTATC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C a score=13923.000000 s hg38.chrUn_KI270749v1 118236 1 + 158759 A s panTro5.chr3 202005477 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773509 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3723 1 - 17846 A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592450 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073600 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005449 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117707 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429580 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 887020 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727998 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062973 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734612 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272014 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 I 13 s aotNan1.NW_018502033v1 3737998 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 I 13 s mm10.chr6 45782825 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16608879 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855494 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e chlSab2.chr22 64501176 14 - 101219884 I a score=16038.000000 s hg38.chrUn_KI270749v1 118237 2 + 158759 TA s panTro5.chr3 202005478 2 - 202621043 ta i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773510 2 - 205426864 TA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3724 2 - 17846 TA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592451 2 + 86207423 TA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073601 2 + 204787373 TA i rheMac8.chr2 C 0 I 11 s macFas5.chr2 61005450 2 - 192460366 TA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117708 2 - 17224310 TA i macNem1.NW_012018021v1 C 0 I 11 s cerAty1.NW_012009469v1 17429581 2 - 41321030 TA i cerAty1.NW_012009469v1 C 0 I 11 s manLeu1.NW_012098965v1 887021 2 - 924385 TA i manLeu1.NW_012098965v1 C 0 I 11 s colAng1.NW_012114711v1 6727999 2 - 10587913 TA i colAng1.NW_012114711v1 C 0 I 11 s calJac3.chr15 46062974 2 - 98464013 CA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734613 2 + 27742158 CA i saiBol1.JH378125 C 0 C 0 s mm10.chr6 45782826 2 - 149736546 TA i mm10.chr6 C 0 I 3 s canFam3.chr20 16608880 2 + 58134056 CA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855495 2 - 2187301 CA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e chlSab2.chr22 64501176 14 - 101219884 I a score=5316.000000 s hg38.chrUn_KI270749v1 118239 2 + 158759 ct s panTro5.chr3 202005480 2 - 202621043 ct i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773512 2 - 205426864 ct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3726 2 - 17846 ct i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592453 2 + 86207423 TT i nomLeu3.chr21 C 0 I 9 s macFas5.chr2 61005452 2 - 192460366 TT i macFas5.chr2 C 0 I 9 s calJac3.chr15 46062976 2 - 98464013 TT i calJac3.chr15 C 0 I 9 s saiBol1.JH378125 27734615 2 + 27742158 TT i saiBol1.JH378125 C 0 I 9 s canFam3.chr20 16608882 2 + 58134056 TT i canFam3.chr20 C 0 I 7 s dasNov3.JH563077 1855497 2 - 2187301 TT i dasNov3.JH563077 C 0 I 6 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I a score=5386.000000 s hg38.chrUn_KI270749v1 118241 6 + 158759 gcctgc s panTro5.chr3 202005482 6 - 202621043 gcctgc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773514 6 - 205426864 gcctgc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3728 6 - 17846 gcctgc i gorGor5.CYUI01007532v1 C 0 C 0 s canFam3.chr20 16608891 6 + 58134056 GCTTGC i canFam3.chr20 I 7 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=279265.000000 s hg38.chrUn_KI270749v1 118247 525 + 158759 ctctgtaggctccacctctgggggcagggcacagacaaacaaaaagacagcagtaacctctgcagacttaaatgtccctgtctgacagctttgaggagagcagtggtgttcccagcacgcagctggagatctgagaactggcagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggagtcaccccccagtaggggcagactgacacctcacacagcgggtactactctgaaacaaaacttgcagaggaacgatcagacagcagcattcgcggttcatgaaaatccgctgttctgcagccactgctgctggtacccaggcaaacagcgtctggagtggacctctagcaaactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaacagagcagaaaaac s panTro5.chr3 202005488 525 - 202621043 ctctgtaggctccacctctgggggcagggcacagacaaacaaaaagacagcagtaacctctgcagacttaaatgtccctgtctgacagctttgaagagagcagtggtgttcccagcatgcagctggagatctgagaactggcagactgcctcctcaagtgggtccctgacccctgacccccgagcggcctaactgggaggcatcccccagtaggggcagactgacacctcacacagcgggtactcctctgagacaaaactttcagaggaacgatcagacagcagcattcgcggttcatgaaaatccgctgttctgcagccaccgcggctggtacccaggcaaacagggtctggagtggacctctagcaaactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaaaagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaacagagcagaaaaac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773520 513 - 205426864 ctctgtaggctccacctctgggggcagggcacagacaaacaaaaaga------------ctgcagacttaaatgtccctgtctgacagctttgaagagagcagtggtgttcccagcatgcagctggagatctgagaactggcagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggaggcaccccccagtagaggcagactgacacctcacacagcgggtactcctctgagacaaaacttccagaggaacgatcagacagcaacatttgcggttcatgaaaatccgctgttctgcagccaccgcggctggtatccaggcaaacagggtctggagtggacctctagcaaactccaacagaactgcagctgagggtcctgtctgttagaaggaaaactaacaaaaagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaatcacaaagatggggaaaaaacagagcagaaaaac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3734 521 - 17846 ctctgtaggctccacctctgggggcagggcacagacaaacaaaaagacagcagtaacctctgcagacttaaatgtccctgtctgacagctttgaaga-agcagtggtgttcccagcacgcagctggagatctgagaactggcagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggaggcaccccccagtaggggcagactgacacctcacacag-gggtact-ctctgagacaaaacttccagaggaacgatcagacagcagcattcgcggttcatgaaaatccgctgttctgcagccaccgctgctagtacccaggcaaacagggtctggagtggacctccagcaaactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaacaga-cagaaaaac i gorGor5.CYUI01007532v1 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69661518 1640 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=573.000000 s hg38.chrUn_KI270749v1 118772 2 + 158759 tg s gorGor5.CYUI01007532v1 4255 2 - 17846 tg i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69663158 2 + 202140232 tg i ponAbe2.chr3 I 1640 I 1144 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I e panPan2.chr3 204774033 0 - 205426864 C e panTro5.chr3 202006013 0 - 202621043 C a score=39726.000000 s hg38.chrUn_KI270749v1 118774 75 + 158759 gaaactctaaaaagcagagcgcctctcctcctccaaaggaacgcagctcctcaccagcaacggaacaaagctgga s panTro5.chr3 202006013 75 - 202621043 gaaactctaaaaagcagagcgcctctcctcctccaaaggaacgcagctcctcaccagcaacggaacaaagctgga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204774033 75 - 205426864 gaaactctaaaaagcagagcgcctctcctcctccaaaagaacgcagctcctcaccagcaacggaacacagctgga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 4257 74 - 17846 gaaactctaaaaagcagag-gcctctcctcctccaaaggaacacagctcctcaccagcaatggaacaaagctgga i gorGor5.CYUI01007532v1 C 0 I 2 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69663160 1144 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=64385.000000 s hg38.chrUn_KI270749v1 118849 245 + 158759 cagagaatgacttcaacgagtcgagagaagaaggcttcagatgatcagactactccaagctacaggaggaaatccaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagacgaatgtataactagaataaccaatacagagaagtgctttaaaggagctgatggagctgaaagccaaggctcaagaactacgtgaagaatgcagaagcctcaggagccaatgcgatcaactggaaga s panTro5.chr3 202006088 244 - 202621043 cggagaatgactttgacgagtcgagagaagaaggcttcagatgatcagactactccaagctacaggaggaaatccaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagacgaatgtataactagaataaccaatacagagaagcgc-ttaaaggagctgatggagctgaaaaccaaggctcgagaactacgtgaagaatgcagaagcctcaggagccaatgcgatcaactggaaga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204774108 243 - 205426864 cggagaatgacttcgacgagtcgagagaagaaggcttcagatgatcagactactccaagctacaggaggaaatccaaacaaaaggcgaagaagttaaaaactttgaaaaaaa-ttagacgaatgtataactagaataaccaatacagagaagtgc-ttaaaggagctgatggagctgaaagccaaggctcgagaactacgtgaagaatgcagaagcctcaggagccgatgagatcaactggaaga i panPan2.chr3 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69663160 1144 + 202140232 I e gorGor5.CYUI01007532v1 4331 2 - 17846 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=447526.000000 s hg38.chrUn_KI270749v1 119094 824 + 158759 aagggtatcagtgatggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatctgattggtgtacctgaaagtgac-gggagaatggaaccaagttggaaaacactctgcagggtattatccaggagaacttccccaatctagcaaggcaggccaacattcagattcaggaaatacagagaacaccacaaagatactcctcgagaagagcaactccaagacacgtaattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcaaccagagagaaaggtcaggttacccacaaagggaagcccatcagactaacagcggatctctctgcagaaaccctacaagccagaagagagtgggggccaatatttaacattcttaaagaaaagaattttcaacccagaatttcatatccagcctaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttatcaccaccaggcctgccctaaaagtgctcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaagaccatcgaggctaggaagaaactgcatcaactaacgagcaaaataaccagctaacatcatcatgacaggatcaacttcacacataacaatattaactttaaatgtaaatggattaaatgctccaactaaaagacacagactggcaaattggat-- s panTro5.chr3 202006332 827 - 202621043 aagggtatcagtgatggaagatgaaatgaatgaaatgaagcgaaaagggaagtttagagaaaaaagaataaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaatacagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcaggttacccacaaagggaagcccatcagactaacagcagatctctcggcagaaactctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatttcataaccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttgtcaccaccaagcctgccctaaaagtgctcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaagaccatcgaggctaggaagaaactgcatcaactaacgagcaaaatcaccagctaacatcataatgacaggatcaaattcacatataacaatattaactttaaatgtaaatggactaaatgctccaattaaaagacacagactggcaaattggataa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204774351 827 - 205426864 aagggtatcagcgatggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgaaggggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaatacagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcaggttacccacaaagggaagcccatcagactaacagcagatctctcgggagaaattctacaagccagaagagagtgggggccaatattcaacattcttaaataaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttctcaccaccaggcctgccctaaaagtgctcctgaaggaagcactaaacatggaaaggaacaactggtaccagccactgcaaaatcatgccaaattgtaaagaccatcgaggctaggaagaaactgcatcaactaacgagcaaaataaccagctaacatcataatgacaggatcaacttcacacataacaatattaactttaaatgtaaatggactaaatgctccaattaaaagacacagactggcaaattggataa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 4333 826 - 17846 aagggtatcagtgatggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatcagattggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcagggtattatccaggagaactt-cccaatctagcaaggcaggccaatattcagagtcaggaaatacagagaatgccacaaagatactcctcgagaagagcaactccaagacacgtaattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcaggttacccacaaagggaagcccatcagactaacagcggatctctcggcagaaactctacaagccagaagagagtgggggccaatatttaacattcttaaagaaaagaattttcaacccagaatttcatatccagcctaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagtgctcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaagaccatcgaggctaggaagaaactgcatcaactaccgagcaaaataaccagctaacatcataatgacaggatcaacttcacacataacaatattaactttaaatgtaaatggactaaatgctccaactaaaagacacagactggcaaattggataa i gorGor5.CYUI01007532v1 I 2 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69663160 1144 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=910.000000 s hg38.chrUn_KI270749v1 119918 1 + 158759 a s panTro5.chr3 202007159 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775178 1 - 205426864 a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5159 1 - 17846 a i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69664304 1 + 202140232 a i ponAbe2.chr3 I 1144 I 185 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=98047.000000 s hg38.chrUn_KI270749v1 119919 183 + 158759 gagttaagacccaacagtgtgctgtattcaggaaactcatctcacatgcagagacacacataggctcaaaatgaaaggatggaggaagatctaccaagcaaatggaaaacaaaaaaaggcagggtttgcaatcctagtctctgataaaacagactttaaaccaacaaagatcaaaagagacaa s panTro5.chr3 202007160 183 - 202621043 gagtcaagacccatcagtgtgctgtattcaggaaactcatctcacgtgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaagcaaatggaaaacaaaaaaaggcaggggttgcaatccacgtctctgataaaacagactttaaaccaacaaagatcaaaagagacaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775179 183 - 205426864 gagtcaagacccatcagtgtgctatattcaggaaactcatctcacgtgcagagacatacataggctcaaaataaaaggatggaggaagatctaccaagccaatggaaaacaaaaaaaggcaggggttgcaatccacgtctctgataaaacagactttaaaccaacaaagatcaaaagagacaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5160 183 - 17846 gagtcaagacccatcagtgtgctgtattcaggaaactcatctcacatgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaagcaaatggaaaacaaaaaaaggcagggtttgcaatcctagtctctgataaaacagactttaaaccaacaaagatcaaaagagacaa i gorGor5.CYUI01007532v1 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664305 185 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=3730.000000 s hg38.chrUn_KI270749v1 120102 4 + 158759 agaa s panTro5.chr3 202007343 4 - 202621043 agaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775362 4 - 205426864 agaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5343 4 - 17846 agaa i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69664490 4 + 202140232 agaa i ponAbe2.chr3 I 185 I 1669 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=186136.000000 s hg38.chrUn_KI270749v1 120106 337 + 158759 ggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacacaatacaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcccacacaataataatgggagactttaacaccccactgtcaacattagacagatcaatgagacagaaagttaacaaggatacccaggaattgaactcagctctgcaccaagtggacctaatagacatctgcagaactctccaccccaaatcaacagaatatacattttttcagcaccacaccacacctattccaaaattgaacacat s panTro5.chr3 202007347 337 - 202621043 ggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcccacacaataacaaggggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagttaacaaggatacccaggaattgaactcagctctgcaccaagcggacctaatagacatctacagaactctccaccccaaatcaacagaatatacatttttttagcaccacaccacacctattccaaaattgagcacat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775366 337 - 205426864 ggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcccacacaataacaatgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagttaacaaggatacccaggaattgaactcagctctgcaccaagtggacctaatagacatctacagaactctccaccccaaatcaacagaatatacatttttttagcaccacaccacacctattccaaaattgaacacat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5347 336 - 17846 ggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcccacacaataataatgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagttaacaaggatacccaggaattgaactcagctctgcaccaagtggacctaatagacatctacagaactctccaccccaaatcaacagaatatacatttttttagcaccacaccacacctattcc-aaattgaacacat i gorGor5.CYUI01007532v1 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e otoGar3.GL873534 11074463 0 + 30473821 C e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=10743.000000 s hg38.chrUn_KI270749v1 120443 20 + 158759 agttggaagtaaagctctcc s panTro5.chr3 202007684 20 - 202621043 agttggaagtaaagctctcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775703 20 - 205426864 agttggaagtaaagctctcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5683 20 - 17846 agttggaagtaaagcgctcc i gorGor5.CYUI01007532v1 C 0 C 0 s otoGar3.GL873534 11074463 19 + 30473821 AGTGGAGAGTGTCAC-CTTT i otoGar3.GL873534 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e mm10.chr6 45782828 3 - 149736546 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=5240.000000 s hg38.chrUn_KI270749v1 120463 7 + 158759 tcagcaa s panTro5.chr3 202007704 7 - 202621043 tcagcaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775723 7 - 205426864 tcagcaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5703 7 - 17846 tcagcaa i gorGor5.CYUI01007532v1 C 0 C 0 s otoGar3.GL873534 11074482 7 + 30473821 TTAATAG i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45782831 7 - 149736546 TTAATAT i mm10.chr6 I 3 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e manLeu1.NW_012098965v1 887023 11 - 924385 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macFas5.chr2 61005454 9 - 192460366 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=43146.000000 s hg38.chrUn_KI270749v1 120470 3 + 158759 ttg s panTro5.chr3 202007711 3 - 202621043 ttg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775730 3 - 205426864 ttg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5710 3 - 17846 ttg i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592464 3 + 86207423 TTG i nomLeu3.chr21 I 9 C 0 s rheMac8.chr2 66073614 3 + 204787373 TTG i rheMac8.chr2 I 11 C 0 s macFas5.chr2 61005463 3 - 192460366 TTG i macFas5.chr2 I 9 C 0 s macNem1.NW_012018021v1 11117721 3 - 17224310 TTG i macNem1.NW_012018021v1 I 11 C 0 s cerAty1.NW_012009469v1 17429594 3 - 41321030 TTG i cerAty1.NW_012009469v1 I 11 C 0 s chlSab2.chr22 64501190 3 - 101219884 TTG i chlSab2.chr22 I 14 C 0 s manLeu1.NW_012098965v1 887034 3 - 924385 TTG i manLeu1.NW_012098965v1 I 11 C 0 s colAng1.NW_012114711v1 6728012 3 - 10587913 TTG i colAng1.NW_012114711v1 I 11 C 0 s calJac3.chr15 46062987 3 - 98464013 TTG i calJac3.chr15 I 9 C 0 s saiBol1.JH378125 27734626 3 + 27742158 TTG i saiBol1.JH378125 I 9 C 0 s cebCap1.NW_016107467v1 272028 3 - 4835464 TTG i cebCap1.NW_016107467v1 I 13 C 0 s aotNan1.NW_018502033v1 3738012 3 + 4093027 TTG i aotNan1.NW_018502033v1 I 13 C 0 s otoGar3.GL873534 11074490 3 + 30473821 TTG i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45782838 3 - 149736546 TTG i mm10.chr6 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e canFam3.chr20 16608897 0 + 58134056 C e dasNov3.JH563077 1855499 6 - 2187301 I a score=11709.000000 s hg38.chrUn_KI270749v1 120473 1 + 158759 t s panTro5.chr3 202007714 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775733 1 - 205426864 t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5713 1 - 17846 t i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592467 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073617 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005466 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117724 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429597 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501193 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 887037 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6728015 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062990 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734629 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272031 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738015 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11074493 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782841 1 - 149736546 A i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1855505 1 - 2187301 T i dasNov3.JH563077 I 6 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I e canFam3.chr20 16608897 0 + 58134056 C a score=126768.000000 s hg38.chrUn_KI270749v1 120474 10 + 158759 CTATGTTTTT s panTro5.chr3 202007715 10 - 202621043 CTATGTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775734 10 - 205426864 CTATGTTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5714 10 - 17846 CTATGTTTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592468 10 + 86207423 CTATGTTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073618 10 + 204787373 CTATGTCTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005467 10 - 192460366 CTATGTCTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117725 10 - 17224310 CTATGTCTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429598 10 - 41321030 CTATGTCTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501194 10 - 101219884 CTATGTCTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 887038 10 - 924385 CTATGTCTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6728016 10 - 10587913 CTATGTCTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062991 10 - 98464013 CTGTGTTTTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734630 10 + 27742158 CTGTGTTTTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272032 10 - 4835464 CTGTGTTTTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738016 10 + 4093027 CTGTGTTTTC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11074494 10 + 30473821 GTGTGCTTTC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782842 10 - 149736546 CTGTATTTAC i mm10.chr6 C 0 C 0 s canFam3.chr20 16608897 10 + 58134056 CTGTGTTTTC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855506 10 - 2187301 CTCTGTTTTC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e eulMac1.LGHX01000499v1 42885 1092 + 631505 I e proCoq1.NW_012148064v1 624105 57 + 2414909 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=32724.000000 s hg38.chrUn_KI270749v1 120484 2 + 158759 AT s panTro5.chr3 202007725 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775744 2 - 205426864 AT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5724 2 - 17846 AT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592478 2 + 86207423 AT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073628 2 + 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005477 2 - 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117735 2 - 17224310 AT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429608 2 - 41321030 AT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501204 2 - 101219884 AT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 887048 2 - 924385 AT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6728026 2 - 10587913 AT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46063001 2 - 98464013 AT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734640 2 + 27742158 AT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272042 2 - 4835464 AT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738026 2 + 4093027 AT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 624162 2 + 2414909 AT i proCoq1.NW_012148064v1 I 57 C 0 s eulMac1.LGHX01000499v1 43977 2 + 631505 AT i eulMac1.LGHX01000499v1 I 1092 C 0 s otoGar3.GL873534 11074504 2 + 30473821 GT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782852 2 - 149736546 AC i mm10.chr6 C 0 C 0 s canFam3.chr20 16608907 2 + 58134056 AT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855516 2 - 2187301 CT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 43091 1094 + 635616 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=699320.000000 s hg38.chrUn_KI270749v1 120486 39 + 158759 GTAGTCTGTAATACTTTCCTCTTATAGACCAAACTTCAG s panTro5.chr3 202007727 39 - 202621043 GAAGTCTGTAATACTTTCCTCTTATAGACCAAACTTCAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775746 39 - 205426864 GAAGTCTGTAATACTTTCCTCTTATAGACCAAACTTCAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5726 39 - 17846 GTAGTCTGTAATACTTTCCTCTTATAGACCAAACTTCAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592480 39 + 86207423 GTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073630 39 + 204787373 GTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005479 39 - 192460366 GTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117737 39 - 17224310 GTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429610 39 - 41321030 GTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501206 39 - 101219884 GTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 887050 39 - 924385 GTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6728028 39 - 10587913 GTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46063003 39 - 98464013 GCAGTCTGTAATGCTTTCCTCTTATAGATTAAACTTCAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734642 39 + 27742158 GTAGTCTGTAATGCTTTCCTCTTATAGTTCAAACTTCAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272044 39 - 4835464 GTAGTCTGTAATGCTTTCCTCTTATAGTTCGAACTTCAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738028 39 + 4093027 GTAGTCTGTAATGCTTTCCTCTTATACTTCAAACTTCAG i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 624164 38 + 2414909 GTAGTTTATAATGCTTTCCCCTTATAGTCC-AACTTCAG i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 43979 38 + 631505 GTAGTCTATAATGCTTTCCTCTTACAGTCC-AACTTCAA i eulMac1.LGHX01000499v1 C 0 I 1906 s eulFla1.LGHW01000501v1 44185 38 + 635616 GTAGTCTATAATGCTTTCCTCTTACAGTCC-AACTTCAA i eulFla1.LGHW01000501v1 I 1094 I 1906 s otoGar3.GL873534 11074506 38 + 30473821 GCAGTCCATAATGCTCAGCTCTTACAGTCC-AACTTTAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782854 39 - 149736546 TTACTCTGAAATGCTTTCCGTTTCTGGTCCAAATTCCAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16608909 39 + 58134056 GTGGTCTATAACGCTTTCATCTGACAATCCAAACTCCAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855518 39 - 2187301 GTACTTTATATTGCTTTCCTCTTATGATCCAAACATCAG i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=562598.000000 s hg38.chrUn_KI270749v1 120525 43 + 158759 GT-TTTTTAGGAAAAGTTGGAGCTCTGTGCATTATGCCCCACCA s panTro5.chr3 202007766 43 - 202621043 GT-TTTTTAGGAAAAGTTGGAGCTCTGTGCATTATGCCCCACCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775785 43 - 205426864 GT-TTTTTAGGAAAAGTTGGAGCTCTGTGCATTATGCCCCACCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5765 43 - 17846 GT-TTTTTAGGAAATGTTGGAGCTCTGTGCATTATGCCCCACCA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592519 42 + 86207423 G--TTTTTAGGAAAAGTTGGAGCTCTGTGCATTATGCCCCACCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073669 42 + 204787373 G--TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005518 42 - 192460366 G--TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117776 42 - 17224310 G--TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429649 42 - 41321030 G--TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501245 42 - 101219884 G--TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 887089 42 - 924385 G--TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6728067 41 - 10587913 G---TTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46063042 42 - 98464013 T--TTTTTAGGAAAAGCTGGAGCTCTGTGCATTATGCCCCCCTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734681 42 + 27742158 T--TTTTTAGGAAAAGCTGGAGCTCTGTGCATTATGCCCCCCTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272083 42 - 4835464 T--TTTTTAGGAAAAGCTGGAGCTCTGTGCATTATGCCCCCCTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738067 42 + 4093027 T--TTTTTAGGAAAAGCTGGAGCTCTGTGCATTATGCCCCCCTA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 624202 42 + 2414909 -C-TTTTAAGGAAAAGTTAGAGTTCTGTTCATTCTGCTCCATGA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11074544 42 + 30473821 -G-TTTAGGGGAAGATTTGGAGTTCTGTTCATCCCGCTCTATGA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782893 43 - 149736546 -GATTTTTATGAAAAGCTGGAACCCTGTCCACTCAGTCCCTCCA i mm10.chr6 C 0 C 0 s canFam3.chr20 16608948 42 + 58134056 --TTTTTTAGGAAATGTTGGAGCTCTGTCCATTCCGCCCCACGA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855557 42 - 2187301 --TTTTTTAGGAAGAGTTGGAGCTCTGTCCATTCTGCCCCACCG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e micMur3.chr32 1626490 202 - 9149476 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=8639840.000000 s hg38.chrUn_KI270749v1 120568 497 + 158759 GCTTCAGGTTCCGTTGTCAACCTACCCCATATGTATAAACCATCTGTTTGTCATGTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CGTCTACTCAGGAGGAGTCTT----------------AGTGATCCAAAGTGCATGGATAGTACCGAgagac--tg--atagatct-atct-aaaatgaaggg--tatgg-acattgccataaaagccTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAACGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGAAAGTATATTTTCAGTT-------GAAGTG------AAAAAAAA- s panTro5.chr3 202007809 498 - 202621043 GCTTCAGGTTCCATTGTCAACCTACCCCATACGTATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCTTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTT----------------AGTGATCCAAAGTGCATGGGTAGTACCGAgagac--tg--acagatct-atct-aaaatgaaggg--tatgg-acattgccataaaagccTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGAAAGTATATTTTCAGTT-------GAAGTG-----AAAAAAAAA- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775828 498 - 205426864 GCTTCAGGTTCCATTGTCAACCTACCCCATACGTATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCTTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTT----------------AGTGATCCAAAGTGCATGGGTAGTACCGAgagac--tg--acagatct-atct-aaaatgaaggg--tatgg-acattgccataaaagccTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGAAAGTATATTTTCAGTT-------GAAGTG-----AAAAAAAAA- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5808 496 - 17846 GCTTCAGGTTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATGTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTACCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTT----------------AGTGATCCAAAGTGCATGGGTAGTACCGAGAGAC--TG--ATAGATCT-ATCT-AAAATG-AGGG--TATGG-ACATTGCCATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAAA-CTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGAAAGTATATTTTCAGTT-------GAAGTG-----AAAAAAAAA- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592561 512 + 86207423 GCTTCAGGTTCCATTGTCAACCTACCCCATACGTATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTGGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTGGATAAACCTC---TGGGTGATCCAAAGTGCATAGGTAGTACCGAGAGAC--TG--ATAGATCT-ATCT-AAAATGAAGGG--TATGG-ACATTGACATAAAAGTCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGACGGACAACATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGTACGTTTTAGAGAAAGTATATTTTCAGTT-------GATGTG----GAAAAAAAAA- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073711 510 + 204787373 GCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTACCGAAAGAC--TG--ATAGATCT-ATCT-GAAATGAAGGG--TACGG-ACATGGACATAAAAGCCTCACAGTGCATGAAATGGATAATAGATGTGAGATTCCCTGAGGAGCTCTGTGCACGTGACTTCCAAAATGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGCACATTTTAGAGAAAGTATATTTTCAGTT-------GAAGTG------AAAAAAAA- i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61005560 510 - 192460366 GCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTACCGAAAGAC--TG--ATAGATCT-ATCT-GAAATGAAGGG--TACGG-ACATGGACATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGAGGAGCTCTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGCACATTTTAGAGAAAGTATATTTTCAGTT-------GAAGTG------AAAAAAAA- i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11117818 511 - 17224310 GCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTACCGAAAGAC--TG--ATAGATCT-ATCT-GAAATGAAGGG--TACGG-ACATGGACATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGAGGAGCTCTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGCACATTTTAGAGAAAGTATATTTTCAGTT-------GAAGTG-----AAAAAAAAA- i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17429691 513 - 41321030 GCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATAAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCAC---TGGGTGATCCAAAGTGCATGGGTAGTACCGAAAGAC--TG--ATAGATCT-ATCT-GAAATGAAGTG--TACGG-ATATGGACATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGAGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGGAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAACGCACATTTTAGAGAAAGTATATTTTCAGTT-------GAAGTG---AAAAAAAAAAA- i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64501287 511 - 101219884 GCTTCAGATTCCATTGTCAACCTACCCCATGCATATAAACCATCTGTTTGTCATTTTTTGGCTTTATTCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTTTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTATCGAAAACC--TG--ATAGATCT-ATCT-AAAATGAAGGG--TACGG-ACATCGACATAAAAGCCTCACAATGCATGAAATAGATAATAGATGTGAGATTCCCTGAGGAGCTGTGTGCACGTGACTTCCAGAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGCACATTTTAGAGAAAGTATATTTTCAGTT-------GAAGTG-----AAAAAAAAA- i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 887131 516 - 924385 GCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTACCGAAAGAC--TG--ATAGATCT-ATCT-GAAATGAAGGG--TACGG-ACATGGACATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGAGAAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGCACATTTTAGAGAAAGTATATTTTCAGTT-------GAAGTGAAAAAAAAAAAAAA- i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6728108 510 - 10587913 GCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTACATATGTC--AAAAATTCAATTAC-TAGTCACATATTATTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGTTCCAAAGTGCATGGGTAGTACCAAGAGAC--TG--ATAGATCT-ATCT-AAAATGAAGGG--TACGG-ACATCGACATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGAGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTTATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAATAATATA-TTCCTATTGCAAATGTACATTTTAGAGAAAGTATATTTTCAGTT-------GAAGTG------AAAAAAAA- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46063084 511 - 98464013 GCTTCAGGTTCCATTGTCAACCTACCCTATACGTAAGAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGTTATCTATTTAAGGCACTTTCTGTCTTATTTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTGC-TAGTCACATATTAGTGTGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTACCATTAGAC--TG--AGAGATCT-ATCT-AAAGTGAAGGG--TATGG-ACATTGACATAAAAGTCTCACAAAACATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACATGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCATCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGGAAGTATATTTTCAGTT-------GAAGTG-----AAAAAAAGA- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734723 511 + 27742158 GCTTCAGGTTCCATTGTCAACCTACCCCATACGTATGAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGTCCATCTGTTCCCTTCTTTTAGATATCTATTTAAGGCACTTTCTCTCTTATTTATCTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TGGTCACATATTAGTGTGT---------CATCTACTCAGAAGGAGTCTTAGATAAACCCC---TGGGTGATCCAAAGTGCATAGGTAGTACCAAGAGAC--TC--AGAGATCT-ATCT-AAAGTGAAGGG--TATGG-ACATTGACATGAAAGTTTCAGAAAACATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCATCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGGAAGTATATTTTCAGTT-------GAAGTG-----AAAAAAAGA- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272125 511 - 4835464 GCTTCAGGTTCCATTGTCAACCTACCCCATACGTACAAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATGTATTTAAGGCACTTTCTCTCTTATTTATTTTATGAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTGTGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATAGGTAATACCAAGAGAC--TG--AGAGATCT-ATCT-AAAGTGAAGGG--TATGG-ACATTGACATAAAAGTTTCACAAAACATGAAATGGGTAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTTCAAAAAGCTGTCATTTCACTATGTGGAAGGACAATATGAATTTACATGGAAATTTATTTCCATCATCCCTAATATA-TTCCTATTGCAAATGTACATTTTAGAGGAAGTATATTTTCAGTT-------GAAGTG-----AAGAAAAGA- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738109 511 + 4093027 GCTTCAGGTTCCATTGTCAACCTACCCCATACGTATGAACCATCTGTTTGACATTTTTTGGGTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTAAGGCACTTTCTCTCTTATTTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTACTGTGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATGCAAAGTGCATGGGTAGTACCAAGAGAC--TG--AGAGATCT-ATCT-AAAGTGAAGGG--TATGG-ACATTGACATGAAAGTCTCACAAAACCTGAAATGGATAATAGATGTGAGATTCCCCGGGGAGCTATGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCATCATCGGTAATATA-TTCCTATTGCAAAAGTACATTTTAGAGGAAGTATATTTTCAGTT-------GAAGTG-----AAAAAAAGA- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1626692 517 - 9149476 GCTTGAGGTTCCATTGTCAACCTACCCCATACGTATAAACCATCTGTTTGTCATTTTTTGGCTTTATCTGAACATCTTCACAAAGAGGCCATCTGTTCCCTTTTTAAAAATATCTATTTATGGTACTTTCTCTCTTATCTATTTTACAAC-TCTTTTGCATATGTCAAAAAAATTCAATTAC-TAGCCACA---TAGTATGC---------CATCCACTCAGGAAGAGTCTTAGACAAAGCCC---TGGGTGATCTAGAGTGCATGGGTAGCATCCAGAGAC--TA--AAAACGCC-ATCT-AAAATGAAGGG--TGGGGGACATTGAAATACAAGTCTCACAATGCATGAAATATCTAATAGATGAGAGATTCCTTGGAGAGCCCTGTGCACATGATTTCCAAAAAGCTGTCATTTCACTATGTAGAAGAACAATATGAATTTACATTGAAATTTATTTCTGCTATCAGTAATATA-TTCTTATTGCAAATGTGCACATTAGAGGAAGTATGCTTTTGGTTACTTTAGGAAGTG-----GGGAAAAA-- i micMur3.chr32 I 202 C 0 s proCoq1.NW_012148064v1 624244 515 + 2414909 GCTCCAGGTTCCATTGTCAACTTACCCCATACGTATAAACCATCTGTTTGTCATTTTCTGGCTTTATCTGAACATCTTCACAAAGAGGCCATCTGTTCTCTTCTTTTAAATATCTATTTGTGGTACTTTCTCCCTTATCTATTTTATAAC-GTTTTTGCATATGTC-AAAAAATTCAATTAC-TAGTCACA---TAGTATGT---------CATCTACTCAGGAGGAGTCTTGGGCAAACCCC---TGGGTGATCGAAAGTGCATAGGTAGCATGAAGAGAC--TA--AAAAATCC-ACCT-AAAATGAAGGG--TGGGGGACATTGAAATACAAGTCTCACAATGCACGAAATCTATAATAGACATGAGATTCCTTGGAGAGCCC-GTGCACATGATTTCCAAAAAGCTGTCATTTTACTATGTAGAAGAACAATATGAATTTACATTGAAATTTATTTCTGCTATCAGTAATATA-TTCCTATTGCAAATGTGCACATTAGAGGAAGTGTACTTTTGGTTACTTTAGGAAGTG-----AAAAAAAA-- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11074586 511 + 30473821 GCTTCAGGTTCCATTGTGAACCTACCCCATACGTATAAACCATCTGTTTGTTATTTTTTGGCTTTATCTGAACATCTTCACAAAGCAGCCATCTGTTCCCTTCTTTTAAATATCTATTTATGGTACGTTTTCGCTTATCTCTCTTACGAC-ATTTTTGCATATGTCAAAAAAAATTAATTAC-TAGTCACA---TAGTATGT---------CATCTACTTGAGAGGAGTCTTAGACAAACCCCCTTTGGGTGATCCAAAGTGCATGGGTAGTATCAGGAGCCTATA--AAAATTCC-ACCT-AAAATCAGGGG--TAGGGACCATTAAAACACAAGACTCAGACTGCATGAAATCTGTAATAGATGTGAGATTCCTTGGAGAGCCTTGTACACAAGATTTCCAAAAAGCTGTCATGTCAGTATGTGGAAGAACAATATGAATTTACACTGAAATTTATT----CTATCAGCAGAGCA-CTCCCATTGCAAATGTGCACTTCAGAGGAAGTAGACTTTTAGTT-------GAAGTG-----AAAAAAAA-- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782936 505 - 149736546 GCTTTGGTTGCCTTCATCAACATATCACATATGTATAAACCATCTGTT----ATCTTTTGGCTTTATCTGAACATCTTCTCAAAGAGGCCATCTGGACCCTTTCTTTAAATATCTATTAAT-GTGCTTCTTCTCTTATCTATTTTACAAC-TTTTTTGCATATGTC--AAAAATTCAATTACATAGCCACATATTAGTATGT---------CATGGACTCAGGAGGAGACTAAGACAAACTCC---TGGGAG-CCCAAAGTTCATGCATAGTACTGAGAGAC--TA--A-AAACCC-ATCT-ATAATGGGGGT--GGGGC-ATATGAACATAAAAGCTTTACAATGCATGAAATTGATAATAGATGTGAGATTCCCTGGAGAGACTTATGCACATGATTTCCAAAAGGCTGTCATTTAACTGTGGAGA---ACAATATGAATTTACATTGAAATTTATTTCCACTATCAAGGCTGTGTTTCTTTTTGCAAATGTGCACTTTGAAGGAAACCTACTTTTAGTA-------GAAGTA-GTGCAAAAGAA--- i mm10.chr6 C 0 C 0 s canFam3.chr20 16608990 514 + 58134056 GCTTCAGGTTCCCTCATCAACCTACCCCATACATATAAACCATCTGTTTGTGATTTTTCGGCTTTATCTGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAAATATCTATTTACAGTACTTTCTCTCTTACCGACTTTACAACTATTTTTGCATATGTC--AAAAATTCAATTACACAGTCACATATTAGTATGT---------CATCTTCTCTGGAGAGGTCTTAGACAAATTCC---TGGGCGATCCAAAGAGCAAGGATAATACTAAGAGGC--TA--AAAAATTTCACCT-AAAAGCAAGGGGTGGGGG-ACACAAAAATAAAAGTCTCACAATGCATGAAATCAATAATAGATCAGAGATGTCCTGGAGAGCC-TGTGCACATGATTTCCAAAAAGCTGTTACTTCACTATGTACAAGAACAATATGAATTTGCATTGAAATTTATTTCTGCCATTAGTAATATA-TGCCTATTGCAAATGTGCACTTTAGGGTAAGTATACTTTCAGTT-------GAAATA-----GAAAAAAA-- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855599 519 - 2187301 GCTTCAGGTTACATT-TCAATTTACCCCATGCTTAT-AACCATCTGTTTGTCGTTTTTTGGCTTTATCTGAACATCTTCACATAGATGCCATCTGTTCCCTTCTTTTAAACATCTATTTACAGTACTTACTTTCTTATCTATTTTACAAC-TTTCTTGCATATGTC--AAAAATTCAATTACATAGTCACATATTAGTATGTCATCTATTCCATCTACTCAGGAGGAATCTTAGACTAACCCC---AGGGTAATTCAAAGAGGAT-GATACTACTGAGAGAC--TACCATCCATCC-ACCTGAAAATGAGGGG--AGGTG-CCACTGAAATAAAAGTCTGACGATGCATGAAATCAATAATAGATCTGAGATTCCCTGGATAGCCTTATACACATGATTTCCAAAAAGCTGTCACTTTACTATGTAGA---ACAATACAAATTTACATTGAAATTTATTTTTGCCATCAGTAATATA-TTCCTATTGCAAATATGCACTTTAGAAGAAATACACTTTTAGTA-------GAAGTG-----GAAGAAAAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e rhiRox1.KN296641v1 1386873 824 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=15290.000000 s hg38.chrUn_KI270749v1 121065 1 + 158759 G s panTro5.chr3 202008307 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776326 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6304 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593073 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074222 1 + 204787373 G i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61006071 1 - 192460366 G i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11118330 1 - 17224310 G i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17430205 1 - 41321030 G i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64501799 1 - 101219884 G i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 887648 1 - 924385 G i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6728618 1 - 10587913 A i colAng1.NW_012114711v1 C 0 I 4 s rhiRox1.KN296641v1 1387697 1 - 1467263 G i rhiRox1.KN296641v1 I 824 I 719 s calJac3.chr15 46063595 1 - 98464013 G i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27735234 1 + 27742158 G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272636 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738620 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1627209 1 - 9149476 A i micMur3.chr32 C 0 I 1 s proCoq1.NW_012148064v1 624759 1 + 2414909 A i proCoq1.NW_012148064v1 C 0 I 4 s otoGar3.GL873534 11075097 1 + 30473821 G i otoGar3.GL873534 C 0 I 4 s mm10.chr6 45783441 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16609504 1 + 58134056 G i canFam3.chr20 C 0 I 9 s dasNov3.JH563077 1856118 1 - 2187301 G i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=3720695.000000 s hg38.chrUn_KI270749v1 121066 215 + 158759 AGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGTCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATAAAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGTGACAAACATAAAAAGCAGAAACATTAAAAGCAGAAAACTCTTTATTTTCTCTGCTTCCCTGGGAGAA----AAACACC s panTro5.chr3 202008308 215 - 202621043 AGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGTCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATAAAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGTGACAAACATAAAAAGCGGAAACATTAAAAGCACAGAACTCTTTATTTTCTCTGCTTCCCTGGGAGAA----AAACACC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776327 215 - 205426864 AGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGTCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATAAAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGTGACAAACATAAAAAGCAGAAACATTAAAAGCACAGAACTCTTTATTTTCTCTGCTTCCCTGGGAGAA----AAACACC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6305 215 - 17846 AGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGTCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATAAAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGTGACAAACATAAAAAGCAGAAACATTAAAAGCAGAAAACTCTTTATTTTCTCTGCTTCCCTGGGAGAA----AAACACC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593074 215 + 86207423 AGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGATACGCTCACC-AAAG-AAATTTTTAAGGTTAAATAAACAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGTGATAAACATAAAAAGGAGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074223 215 + 204787373 AGATGCACAAATAGATGTTTGAACGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006072 215 - 192460366 AGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118331 215 - 17224310 AGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430206 215 - 41321030 AGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501800 215 - 101219884 AGATGCACAAATAGATGTTTGAATGGCATTTGTGTAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGGAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 887649 215 - 924385 AGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTACCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6728623 215 - 10587913 AAATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTAAC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGAGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACT i colAng1.NW_012114711v1 I 4 C 0 s calJac3.chr15 46063596 215 - 98464013 AGAAGCACAAATAGGTGTTTGAATGGCATTTGTATAATTCCAGGGCAAG-TTTTTAGGACAAGCTTACC-AAGG-AAATTTTTAAGGTTAAATATAAAGCAATCTTCTAGTATATCAGGATGTCTGCTAAAAGCAGAGCACTATGATAAGCATAGAAAGCAGAAACATTAAAAGCAGCAAACTCTTTATTGTCTCTGCTTCCTTGGGAGAA----AAACACC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27735235 215 + 27742158 AGAAGCACAAATAGATGTTTGAATGGCATTTGTATAATTCCAGGGCAAG-TTTTTAGGGCGAGGTTACC-AAGG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTATATCAGGATGTTTGCTAAAAGCAGAGCACTATAATAAACATAAAAAGCAGAAACATTAAAAGCAGCAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i saiBol1.JH378125 C 0 I 4614 s cebCap1.NW_016107467v1 272637 215 - 4835464 AGAAGCACAAATAGATGTTTGAATGGCATTTGTATAATTCCAGGGCAAG-TTTTTAGGACAAGGTTACC-AAGG-AAATTTTTAAGGTTAAATATGAAGCAAACTTTTAGTATATCAGGATGTTTGCTAAAAGCAGAGCACTATGATAAACATAAAAAGCAGAAACATTAAAAGCAGCAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738621 215 + 4093027 AGAAGCACAAATAGATGTTTGAATCGCATTTTTATAATTCCAGGGCAAG-TTTTTAAGACAAGCTTACC-AAGG-AAACTTTTAAGGTTAAATATGAAGCAAACTTTTAGTATATCAGGATGTTTGCTAAAAGCAGAGCACTATGATAAGCATAAAAAGAAGAAACATTAAAAGCAGCAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1627211 208 - 9149476 -----CACACATAGATGTTTTAATGGCATTTGTATAATTCT--GGCAAGTTTTTTAGGACAAGCTTA-C-AAAG-AAATTCTTGAGGTTAAATATGAAGCAAACTTTTAATGTATCAGGGCGTTTGCTAAAAGCAGAACACTATGATGAACATAAAAAGCAGAAACATTAAAAGCAGTAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i micMur3.chr32 I 1 C 0 s proCoq1.NW_012148064v1 624764 212 + 2414909 GAAAGCACACATGGATGTTTTAATGGCATTTGTATAATTCT--GGCAAG-TTTTTAGGACAAGCTTA-C-AAAG-AAATTCTTGAGGTTAAATATGAAGCAAACTTTTAATGTATTGGGGTGTTTGCTAAAAGCAGAGCACTATGATGAACATAAAAAGCAGAAACATTAAAAGCAGTAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i proCoq1.NW_012148064v1 I 4 C 0 s otoGar3.GL873534 11075102 218 + 30473821 AAAAGCACAATCAGATGTTTTAATAACATTTATACAGTCCTGGGGCAAA--TTTTAGGACAAGCTTATC-AAAG-AAATTCTTGAATTTAAATATGAAGCAAACTTTTAATGTACTGGGGTGTTTGCTAAAAGCAGAACATTATGACCAATATAAAAAGCAAAAACATTAAAAGCGGTGAACTCTTTATTGTGTCTGCTTCCCTGGGAAAATAAGAAACACC i otoGar3.GL873534 I 4 C 0 s mm10.chr6 45783442 213 - 149736546 GAAAGCACAAATAGATGTTTTAATGGAACTTGTACAATTCTGGAACAAC-TTTTTAGGACAGGCTTATC-AAAG-AAATTTCTGAGGTTAAATAGGAAGCAGACTTTTAATGTTTGAGGGTGTTTGCTGAAAGCAGAATGCTGTGATGAACTTGAAAAGGAGAAACATTAAAAGCAGTGAGCGCTTTAT--TTTCTGTTTCCCCAAGAGCA----AAGCTCC i mm10.chr6 C 0 C 0 s canFam3.chr20 16609514 216 + 58134056 AAAAGCACAAATAGATGTTTCAACAGCATTTGTATAATGCTGGGGCAAG-TTTTTAGGACCAGCTTACCGAAGG-AAATTCCTAAGGTTAAATATGAAGCAAACTTTTAATGTGTGGGGGTGTTTGCTAAAAGCAGAACACTATGATGGACGTAAAAAGCTGAAACATTAAAGGCAGTCAGCTCTTTATTTTCTCTGCTTCCCTAGGAGCA----AAACACC i canFam3.chr20 I 9 C 0 s dasNov3.JH563077 1856119 202 - 2187301 AAAAGCAGAAATAGATGTTTTACTGGCATGCCTAAATTTCTAGAACAGGGTTTTTAGGACAGACCTACC-AAAGCAAATTCCTGATATTAAATATGATGCAAACTTTAAAAATATAGCTGTGTATGCTTCAAGCAGAACACAATGATT---------------AACATTAAAAGCAGTGTACTCTTTATTTTCCCTACTTTCCTGGGAGCA----AAACACC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=2737438.000000 s hg38.chrUn_KI270749v1 121281 153 + 158759 AACAGAAGAATTCGGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTACAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAAGAAATTTACTAAAAT s panTro5.chr3 202008523 153 - 202621043 AACAGAAGAATTCGGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAAGAAATTTACTAAAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776542 153 - 205426864 AACAGAAGAATTCGGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACGTTTAAAAATAAAAAGTCAAAAGAAATTTACTAAAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6520 153 - 17846 AACAGAAGAATTTGGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGAAACTTGGAGTTGTGAGATTACAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAAGAAATTTACTAAAAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593289 153 + 86207423 AACAGAAGAATTCGGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGCAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAAGAAATTTACTAAAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074438 153 + 204787373 AACAGAAGAATTCAGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTACTAAAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006287 153 - 192460366 AACAGAAGAATTCAGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTACTAAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118546 153 - 17224310 AACAGAAGAATTCAGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTATTAAAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430421 153 - 41321030 AACAGAAGAATTCAGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTACTAAAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502015 153 - 101219884 AACAGAAGAATTCAGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTACTAAAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 887864 153 - 924385 AACAGAAGAATTCAGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTACTAAAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6728838 153 - 10587913 AACAGAAGAATTCGGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAAATTATAA-----TTGAGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTGAAAATAAAAAGTCAAAATAAATTTACTAAAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46063811 153 - 98464013 AACAAAAGAATTCGGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAT-----TTGGGTAAACAGATTCAGACACCATCATCACCAACTCTATTTGTTCATATTAGAAAATAAAAAGTCAAAAGAAGTTTACTAAAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740064 153 + 27742158 AACAGAAGAATTCGGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGTAGTTGTGAGATTATAT-----TTGGGTACACACATTCAGACACCATCATCACCAACTCTTTTTGTTCATATTAGAAAATAAAAAGTTAAAAGAAATTTACTAAAAT i saiBol1.JH378125 I 4614 C 0 s cebCap1.NW_016107467v1 272852 153 - 4835464 AACAGAAGAATTCGGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAT-----ATGGGTACACAGATTCAGACACCATCATCACCAACTCTTTTTGTTCATATTAGAAAATAAAAAGTTAAAAGAAATTTACTAAAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738836 153 + 4093027 AACAGAAGAATTCGGTAGAT-AAATGA-TGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAT-----TTGGGTACACAGATTCAGACGCCATCATCACCAAGTCTTTTTGTTCATATTAGAAAATAAAAAGTCAAAAGAAATTTACTAAAAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1627419 154 - 9149476 AACAGAAGAATTCTGTAGAT-AAATGATTGTTTCCAACTGTGTTGGGAGCTTAGAGTTGTGAGATTATAA-----TTGGGACAACAGATTCAGACACCATCATCACTAGCTCTTTTTGTTCACATTTAAAAATACAAAGTCAAAAGGAATTTACTAAAAT i micMur3.chr32 C 0 I 283 s proCoq1.NW_012148064v1 624976 153 + 2414909 AACAGAAGAATTCTGTAGAT-AAATGA-TGTCTCCAACTGTGTTGGGAGCTTAGAGTTGTCAGATTATAA-----TTGGGACAACAGATTCAGACACCATCATCACTAGCTCTTTTTGTTCACATTTAAAAATAAAAAGTCAAAAGGAGTTTACTAAAAT i proCoq1.NW_012148064v1 C 0 I 50 s otoGar3.GL873534 11075320 153 + 30473821 AACAGAAGAATTCTGTAGAT-GAACGA-TGTTTCCAACTGTGCTGGGAGCTGAGAGTTGTGAGACTATAA-----TTGGGACAACAGATTCAGACACCATCACCACCGGCTCTTTGTGTTCACATTTAAAAATGAAAAGTCAAAAGGAATTTACTGAAAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45783655 151 - 149736546 -AAGAGAGAGTTCTGGAGATAAAATGA-TACTTCCAGCTGTGCTTGGAGTTCAGAGTGGCGAGATTATAA-----TTGGGACAACAGGTTCAAACACTGTCATCACCAACTCTTTTTGTTCACATTAAAAAGTAAAAA--CAACAACAAACTATTAAATT i mm10.chr6 C 0 I 13 s canFam3.chr20 16609730 152 + 58134056 AGCAGAAGAATTCTGCAGAT-AAATGG-TATTTCCAACTATGTTGGGAGCTCAAAGTTGTGAGATTATAA-----TTGGGACAACAGATTCAGATACCATCA-CACCAGCTCTTTTCACTCACATTTAAAAATAAAAGTTTAAAAAGAATTTACTAAAAG i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1856321 158 - 2187301 AAAGAAAGAGCTCTGTAGAT-GAATGG-TGTTTCCAACTGTGTTGGGAGTTTAGAATTATGAGATTAAAAATGAGTTGGGACAACAGATTCAGATACCACCATCACCAGCTCCTTTATTTCACATTTAAAACTAAAATGTCAAAAGAAATTTACTCAAAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=452688.000000 s hg38.chrUn_KI270749v1 121434 40 + 158759 ----------------CTGTATATGTCTGGTTACATGTTTATATGGTTAAAATTTA s panTro5.chr3 202008676 40 - 202621043 ----------------CTGTATATGTCTGGTTACATATTTATAAGGTTAAAATTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776695 40 - 205426864 ----------------CTGTATATGTCTGGTTACATATTTATAAGGTTAAAATTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6673 40 - 17846 ----------------CTGTATATGTCTGGTTACATATTTATATGGTTAAAATTTA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593442 40 + 86207423 ----------------CTGTATATGTCTGGTTACATATTTATATGGTTAAAATTTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074591 40 + 204787373 ----------------CTGTATATGTGTGGTTACATATTTGTATGGTTAAAATTTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006440 40 - 192460366 ----------------CTGTATATGTGTGTTTACATATTTGTATGGTTAAAATTTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118699 40 - 17224310 ----------------CTGTATATGTGTGTTTACATATTTGTATGGTTAAAATTTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430574 40 - 41321030 ----------------CTGTATATGTGTGGTTACATATTTGTATGTTTAAAATTTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502168 40 - 101219884 ----------------CTGTATATGTGTGGTTACATATTTATATGGTTAAAATTTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888017 40 - 924385 ----------------CTGTATATGTGTGGTTACATATTTGTATGGTTAAAATTTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6728991 40 - 10587913 ----------------CTGTATATGTGTGGTTACATATTTATATGTTTAAAATTTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46063964 40 - 98464013 ----------------CAGTATATCTGTGGTTACATATTTGTATGATTAAATTTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740217 40 + 27742158 ----------------TAGTATATGTATGGTTACATATTTATATGATTAGAATTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273005 40 - 4835464 ----------------CGGTATATGTATGGTTACATATTTATATGATTAAAATTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738989 40 + 4093027 ----------------CAGTATATGTGTGGTTACATATTTATATGATTAAAATTTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11075473 40 + 30473821 ----------------TTTCATATGTGTAGttatatatttatatgattaaaatttc i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45783819 30 - 149736546 ----------------atgtatatatatgcatatatacatatgtga---------- i mm10.chr6 I 13 C 0 s canFam3.chr20 16609884 38 + 58134056 ----------------CCGTGTGTGTATA--TAATCATATATATGATTAAAGTTTC i canFam3.chr20 I 2 I 8 s dasNov3.JH563077 1856479 56 - 2187301 CCCCATATGTATTTGTACGTGTATGTGTGTGTACAAGTTCATATGATTGAAGTTTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 625129 50 + 2414909 I e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=1143362.000000 s hg38.chrUn_KI270749v1 121474 93 + 158759 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-TA----TCTATCAATGTATTT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATGTTTCCAAGTTCTATGGATAA s panTro5.chr3 202008716 93 - 202621043 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-TA----TCTATCAATGTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATGTTTCCAAGTTCTATGGATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776735 93 - 205426864 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-TA----TCTATCAATGTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATGTTTCCAAGTTCTATGGATAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6713 94 - 17846 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-ta----tctatcaatgtatct-atacatctg--ttaactttcatctaC--AAA--T--ATGTTTCCAAGTTCTATGGATAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593482 97 + 86207423 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-tatctctctatcaatctatct-atacatctG---TAACTTTTATCTAC--AAA--T--ATGTTTCCAAGTTCTATGGATAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074631 97 + 204787373 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-tatctctctatcaatctatct-atacatctG---TAACTTTTATCTAC--AAA--T--ATATTTCCAAGTTCTATAGATAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006480 97 - 192460366 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATATTTCCAAGTTCTATAGATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118739 97 - 17224310 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATATTTCCAAGTTCTATAGATAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430614 97 - 41321030 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATATTTCCAAGTTCTATAGATAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502208 97 - 101219884 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTTTATCTAT--AAA--T--ATATTTCCAAGTTCTATAGATAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888057 97 - 924385 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-tatctctctatcagtctatct-atacatctg---taacttttatctat--aaa--t--atatTTCCAAGTTCTATAGATAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729031 97 - 10587913 A-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATATTTCCAAGTTCTATAGATAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064004 92 - 98464013 G-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-TA----TCTATCAATCTATCT-ATACATCTG---TAACTTT-ATCTAC--AAA--T--ATATTTCCAAGCTCTATGGATAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740257 96 + 27742158 G-------TATGTATA-CTTTT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTGTCT-ATACATCTG---TAACTTT-ATCTAC--AAA--T--ATATTTCTAAGTTCTATGGATAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273045 92 - 4835464 G-------TATATATA-CTTTT-----------------ATAT-----AACTGCAT-ta----tctctctatctatct-atacatctg---taacttt-atctaC--AAA--T--TTATTTCCAAGTTCTATGGATAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739029 100 + 4093027 GT---ATATATATATA-CTTTT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTT-ATCTAC--AAA--T--ATATTTCCAAGTTCTATGGATAA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 625179 87 + 2414909 a-------tatataca-cattt-----------------gtat-----aactgcat-ta------------tctatca-ataaatcta---taACTTTTATCTAA--AAATTT--CTATTTCCAAGTTGTATTGAAAA i proCoq1.NW_012148064v1 I 50 C 0 s otoGar3.GL873534 11075515 87 + 30473821 a-------tatataCA-CATTT-----------------TCAT-----GATGGCAT-TG------------CCTACCT-ATAAATCTG---CAACTATTATGGAC--AAACTT--CTATTTCTAAATGATATTGATAA i otoGar3.GL873534 I 2 C 0 s mm10.chr6 45783849 109 - 149736546 a-------tatatata-tgtaTGATTAAAAAGGTCACAGATATTTATGAACTGCAT-TA------------AGTATTT-GGAAATTTG---CAACTTTTTTCTAG--AAA--TTGCTGTTTTGAAGTTACACCAATGA i mm10.chr6 C 0 C 0 s canFam3.chr20 16609930 86 + 58134056 A-------TATATATA-C---T-----------------ATAT-----AACTGCAT-AA--------TCAA--TATCT-ATAAATGTG---TAACTTTTACCTACATAGA--T--CTATTTCCAAATTGCATGTATCA i canFam3.chr20 I 8 C 0 s dasNov3.JH563077 1856535 104 - 2187301 -CCATGTCTACATACATCTCTT-----------------ATAT-----GACTGTATATA-------ATCAATCTATCTAATATGTGTGGCTTAACTTTCACCTAT--AAACTT--CTATTTTCAAGCTGTGTTTACAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 185216 1715 + 958716 I a score=39306.000000 s hg38.chrUn_KI270749v1 121567 3 + 158759 TAG s panTro5.chr3 202008809 3 - 202621043 CAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776828 3 - 205426864 CAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6807 3 - 17846 TAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593579 3 + 86207423 TAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074728 3 + 204787373 TAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006577 3 - 192460366 TAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118836 3 - 17224310 TAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430711 3 - 41321030 TAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502305 3 - 101219884 TAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888154 3 - 924385 TAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729128 3 - 10587913 TGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064096 3 - 98464013 TAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740353 3 + 27742158 CAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273137 3 - 4835464 CAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739129 3 + 4093027 TAG i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 186931 3 + 958716 caa i tarSyr2.KE939134v1 I 1715 I 14 s proCoq1.NW_012148064v1 625266 3 + 2414909 TTG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11075602 3 + 30473821 CAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45783958 3 - 149736546 TAG i mm10.chr6 C 0 C 0 s canFam3.chr20 16610016 3 + 58134056 TAG i canFam3.chr20 C 0 I 5 s dasNov3.JH563077 1856639 3 - 2187301 TAG i dasNov3.JH563077 C 0 I 5 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I a score=363100.000000 s hg38.chrUn_KI270749v1 121570 29 + 158759 ATGAGCAAATCAATTACATATGAAGGTTA s panTro5.chr3 202008812 29 - 202621043 ATGAGCAAATCAATTACAAATGAAGGTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776831 29 - 205426864 ATGAGCAAATCAATTACAAATGAAGGTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6810 29 - 17846 ATGAGCAAATCAATTACATATGAAGGTTC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593582 29 + 86207423 ATGAGCAAATCAATAACAAATGAAGAGTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074731 29 + 204787373 ATGAGCAAATCAATAACAAATGAAGGGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006580 29 - 192460366 ATGAGCAAATCAATAACAAATGAAGGGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118839 29 - 17224310 ATGAGCAAATCAATAACAAATGAAGGATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430714 29 - 41321030 ATGAGCAAATCAATAACAAATGAAGGGTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502308 29 - 101219884 ATGAGCAAAGCAATAACAAATGAAGGGTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888157 29 - 924385 ATGAGCAAAGCAATAACAAATGAAGGGTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729131 29 - 10587913 ATGAGCAAATCAATAACAAATGAAGGGTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064099 29 - 98464013 GTGAGCAAATCAATAACAAATGAAGGGTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740356 29 + 27742158 GTGACCAAATCAATAACAAATGAAGGGTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273140 29 - 4835464 GTGACCAAATCAATAACAAATGAAGGGTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739132 29 + 4093027 GTGACCAAATCAATAGAAAATGAAGGGTA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 625269 29 + 2414909 ATGAACAAATCAAGAACAAATCAAGGGTA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11075605 18 + 30473821 ATGAACAAATGAGGA-----------GTA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45783961 28 - 149736546 GCGATCAAGTCATAAACAGG-GAAGTATA i mm10.chr6 C 0 C 0 s canFam3.chr20 16610024 29 + 58134056 ATGAACAAATCAAGAAAAAATGCAATATA i canFam3.chr20 I 5 C 0 s dasNov3.JH563077 1856647 29 - 2187301 ATGAACAAATCAAGAGCAAATGAGGGACA i dasNov3.JH563077 I 5 I 2170 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 186934 14 + 958716 I a score=798058.000000 s hg38.chrUn_KI270749v1 121599 62 + 158759 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAAGATTT--TGATATAATA s panTro5.chr3 202008841 61 - 202621043 TCTAATAAACATTAT-AAATTTATTTAGACATCAACACTT--------GCAGGAAGATTT--TGGTATAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776860 62 - 205426864 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAAGATTT--TGGTATAATA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6839 62 - 17846 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAAGATTT--TGGTATAATA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593611 62 + 86207423 TCTAATAAACATAATCAAATTTATTTAGACATCAACACTT--------GCAGGAAGATTT--TGGTATAATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074760 61 + 204787373 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAATA-TT--TGATATAATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006609 61 - 192460366 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAATA-TT--TGATATAATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118868 61 - 17224310 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAATA-TT--TGATATAATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430743 61 - 41321030 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAATA-TT--TGATATAATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502337 61 - 101219884 TCTAATACACATTATCAAATTTATTTAGACATCAACACTT--------TCAGGAATA-TT--TGATATTATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888186 61 - 924385 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAATA-TT--TGATataata i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729160 61 - 10587913 TCTAATAAACATTATCAAATTTGTTTAGACATCAACACTT--------GCAGGAATA-TT--TGATATAATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064128 62 - 98464013 TCTAATAAAAATTATTAAATTCATTTAGACATCAGCATTT--------GCAAGAAGATTT--TGGTATAATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740385 62 + 27742158 TCTAAGAAACATTATTAAATTTATTTAGACATCAACATTT--------GCAGGAAGATTT--TGGTATAATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273169 62 - 4835464 TCTAATAAACATTATTGAATTTATTTAGGCATCAACATTT--------GCAAGAAGATTT--TGGTATAATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739161 62 + 4093027 TCTAATAAACATTATTAAATTTATTTAGACATCAACATTT--------GCAAGAAGATTT--TGGTATAATa i aotNan1.NW_018502033v1 C 0 I 10 s proCoq1.NW_012148064v1 625298 59 + 2414909 TCTAATAAGCATTATTAAATTTACTTGGAAAGCAATACTT--------GCAAGAT---TT--TGATATAATA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11075623 61 + 30473821 GCTAACAAATATTATTAAATCTACTTGGATACCAATACTT--------GCAAGAT---TTGGGGGTCTAGTA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45783989 62 - 149736546 GATCACAAATCCTCTTAAATGCAGTGAGACAGCAGTGCTT--------ATATGAGGGTAC--TGCTTTAGCA i mm10.chr6 C 0 C 0 s canFam3.chr20 16610053 70 + 58134056 TCTAACAAACATAATTAATTTTATTTAGATATCAACACTTCttttttcttaagattttat--ttatttattt i canFam3.chr20 C 0 I 5 s dasNov3.JH563077 1858846 62 - 2187301 TCTAATAAACATTACTAAATTTATTTAGACATCAACACTT--------CCAAAAAGATTT--TGGTATAAGA i dasNov3.JH563077 I 2170 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 186934 14 + 958716 I a score=-72681.000000 s hg38.chrUn_KI270749v1 121661 14 + 158759 AAATAAACA-----------------------------GACag s panTro5.chr3 202008902 6 - 202621043 --------a-----------------------------gatag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776922 14 - 205426864 AAatagata-----------------------------gatag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6901 14 - 17846 AAatagaca-----------------------------gacag i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593673 13 + 86207423 AAatagat------------------------------gatag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074821 37 + 204787373 AAATAGATA--TTAGAC----AGACagatagatagatagatag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006670 37 - 192460366 AAATAGATA--TTAGAC----AGGCagatagatagatagatag i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118929 21 - 17224310 AAATAGATA--Ttagac--------------------agatag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430804 41 - 41321030 AAATAGATA--TTAGACAGACAGACagatagatagatagatag i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502398 15 - 101219884 AAATAGATA--ATAAAa-------------------------- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888247 14 - 924385 aaatagata--ataaa--------------------------- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729221 43 - 10587913 AAatagataagatagatagatagatagatagatagatagatag i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064190 17 - 98464013 ATatagatg--atag-----------------------gata- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740447 17 + 27742158 ATATACATA--ATAG-----------------------gata- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273231 17 - 4835464 ATatagatg--atag-----------------------gata- i cebCap1.NW_016107467v1 C 0 C 0 s proCoq1.NW_012148064v1 625357 14 + 2414909 AAATTAATA-----------------------------GACAG i proCoq1.NW_012148064v1 C 0 I 52 s otoGar3.GL873534 11075684 14 + 30473821 AAATTAATA-----------------------------GACAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784051 6 - 149736546 AAACCA------------------------------------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16610128 13 + 58134056 agatagagc--acaa---------------------------- i canFam3.chr20 I 5 C 0 s dasNov3.JH563077 1858908 8 - 2187301 AATTGCAG----------------------------------- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 186934 14 + 958716 I e aotNan1.NW_018502033v1 3739223 10 + 4093027 I a score=5676.000000 s hg38.chrUn_KI270749v1 121675 3 + 158759 ata-- s panTro5.chr3 202008908 3 - 202621043 ata-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776936 3 - 205426864 ata-- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6915 3 - 17846 ata-- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593686 3 + 86207423 ata-- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074858 3 + 204787373 ata-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006707 3 - 192460366 ata-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118950 3 - 17224310 ata-- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430845 3 - 41321030 ata-- i cerAty1.NW_012009469v1 C 0 C 0 s colAng1.NW_012114711v1 6729264 3 - 10587913 ata-- i colAng1.NW_012114711v1 C 0 C 0 s otoGar3.GL873534 11075698 2 + 30473821 AT--- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16610141 3 + 58134056 gta-- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1858916 3 - 2187301 --AGG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 625371 52 + 2414909 I e mm10.chr6 45784057 0 - 149736546 C e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 186934 14 + 958716 I e manLeu1.NW_012098965v1 888261 0 - 924385 C e aotNan1.NW_018502033v1 3739223 10 + 4093027 I e cebCap1.NW_016107467v1 273248 0 - 4835464 C e saiBol1.JH378125 27740464 0 + 27742158 C e calJac3.chr15 46064207 0 - 98464013 C e chlSab2.chr22 64502413 0 - 101219884 C a score=164043.000000 s hg38.chrUn_KI270749v1 121678 30 + 158759 gatagatagatagat--------------------------------agatagatagataga s panTro5.chr3 202008911 30 - 202621043 gatagatagatagat--------------------------------agatagatagataga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776939 30 - 205426864 gatagatagatagat--------------------------------agatagatagataga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6918 30 - 17846 gatagatagatagat--------------------------------agatagatagataga i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593689 30 + 86207423 gatagatagatagat--------------------------------agatagatagataga i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074861 30 + 204787373 gatagatagatagat--------------------------------agatagatagataga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006710 30 - 192460366 gatagatagatagat--------------------------------agatagatagataga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118953 30 - 17224310 gatagatagatagat--------------------------------agatagatagataga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430848 30 - 41321030 gatagatagatagat--------------------------------agatagatagataga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502413 28 - 101219884 --tagatagatagat--------------------------------agatagatagataga i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888261 21 - 924385 ---------atagat--------------------------------agatagatagataga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729267 30 - 10587913 gatagatagatagat--------------------------------agatagatagataga i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064207 22 - 98464013 gctagctagatagat----------------------------------------caatcga i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740464 10 + 27742158 gatag----------------------------------------------------ataga i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273248 61 - 4835464 gacagatagatagatagatagatagatagatagatagatagatagatagat-agatgataga i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739233 29 + 4093027 gatagagagatagat--------------------------------agat-gatagataga i aotNan1.NW_018502033v1 I 10 C 0 s canFam3.chr20 16610144 30 + 58134056 ggcaaagcagctgtc--------------------------------agagagagagggaga i canFam3.chr20 C 0 I 126 s dasNov3.JH563077 1858919 3 - 2187301 --------------------------------------------------------GAT--- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 625371 52 + 2414909 I e mm10.chr6 45784057 0 - 149736546 C e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 186934 14 + 958716 I e otoGar3.GL873534 11075700 0 + 30473821 C a score=233757.000000 s hg38.chrUn_KI270749v1 121708 51 + 158759 tagatagata----gataaggtagataggctagatagTTC-------AACACAAAAT---GTTAA s panTro5.chr3 202008941 48 - 202621043 tagatagata-------AAGGTAGATAGGCTAGATAGTTC-------AACACAAAAT---GTTAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776969 48 - 205426864 tagatagata-------AAGGTAGATAGGCTAGATAGTTC-------AACACAAAAT---GTTAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6948 55 - 17846 tagatagatagatagataaggtagataagctagatagTTC-------AACACAAAAT---GTTAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593719 34 + 86207423 tagatagatt--------agatagatagGCTGCATAGTTC-------AA---------------- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074891 51 + 204787373 tagaAAGAAA----ACTTAGGTAAATAGGCTAGATAGCTC-------AACACAAAAT---GTTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006740 50 - 192460366 tagatagaAA----ACTTA-GTAAATAGGCTAGATAGCTC-------AACACAAAAT---GTTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118983 50 - 17224310 tagaAAGAAA----ACTTA-GTAAATAGGCTAGATAGCTC-------AACACAAAAT---GTTAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430878 51 - 41321030 tagatagata----ACTTAGGTAAATACGCTAGATAGCTC-------AACACAAAAT---GTTAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502441 51 - 101219884 tagatagata----gCTTAGGTAAATAGGCTAGATAGCTC-------AACACAAAAT---GTTAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888282 51 - 924385 tagatagata----gCTTAGGTAAATAGGCTAGATAGCTC-------AACACAAAAT---GTTAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729297 51 - 10587913 tagatagata----gCTTAGGTAAATAGGCTAGATAGCTC-------AACACAAAAT---GTTaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064229 47 - 98464013 tagatagctt----aggaagatagg----ctaggtaggta-------gacaCAAAAA---GTTAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740474 51 + 27742158 tagatagctt----aggaagatagatagCCTAGATAGGTC-------GACACAAAAT---GTTAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273309 51 - 4835464 tagaaagctt----acgaagatagataggctagataggta-------gaCACAAAAT---GTTAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739262 51 + 4093027 tagatagCTT----AGGAAGATAGATAGGCTAGATAGGTC-------GACACAAAAT---GTTAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11075700 11 + 30473821 ------------------------------------------------ACAAAAAAT---AC--- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784057 28 - 149736546 --------------------ATAGTTTGGGTAGATTTGTC-------AGTGGTAA---------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16610300 61 + 58134056 TAAAAAAAGA----TTTTGGTCTGATAAAATTGATAGGGAGAAAGAGAACACAAAATCGAGATAA i canFam3.chr20 I 126 I 8 s dasNov3.JH563077 1858922 12 - 2187301 --------------------------------------------------ATTAAAA---ATTAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 625371 52 + 2414909 I e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 186934 14 + 958716 I a score=23415.000000 s hg38.chrUn_KI270749v1 121759 2 + 158759 CA s panTro5.chr3 202008989 2 - 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777017 2 - 205426864 CA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7003 2 - 17846 CA i gorGor5.CYUI01007532v1 C 0 C 0 s rheMac8.chr2 66074942 2 + 204787373 CA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006790 2 - 192460366 CA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119033 2 - 17224310 CA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430929 2 - 41321030 CA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502492 2 - 101219884 CA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888333 2 - 924385 CA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729348 2 - 10587913 ca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064276 2 - 98464013 CA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740525 2 + 27742158 CA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273360 2 - 4835464 TA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739313 2 + 4093027 CA i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 186948 2 + 958716 ta i tarSyr2.KE939134v1 I 14 I 588 s otoGar3.GL873534 11075711 2 + 30473821 CA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784085 2 - 149736546 TG i mm10.chr6 C 0 C 0 s canFam3.chr20 16610369 2 + 58134056 CA i canFam3.chr20 I 8 C 0 s dasNov3.JH563077 1858934 2 - 2187301 GA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 625371 52 + 2414909 I e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e nomLeu3.chr21 67593753 0 + 86207423 C a score=197423.000000 s hg38.chrUn_KI270749v1 121761 19 + 158759 TAAAATATGACAAAGGCAT s panTro5.chr3 202008991 19 - 202621043 TAAAATATGACAAAGGCAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777019 19 - 205426864 TAAAATATGACAAAGGCAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7005 19 - 17846 TAAAATATGACAAAGGCAT i gorGor5.CYUI01007532v1 C 0 C 0 s rheMac8.chr2 66074944 19 + 204787373 TAAAATATGACAATGGCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006792 19 - 192460366 TAAAATATGACAATGGCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119035 19 - 17224310 TAAAATATGACAATGGCAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430931 19 - 41321030 TAAAATATGACAAAGGCAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502494 19 - 101219884 TAAAATATGACAAAGGCAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888335 19 - 924385 TAAAATATGACAAAGGCAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729350 19 - 10587913 taaaatataacaaaggcat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064278 19 - 98464013 TAAAACATGACAAAGGCAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740527 19 + 27742158 TAAAATATGACAAAGGCAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273362 19 - 4835464 TAAAATATGACAAAGGCAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739315 19 + 4093027 TAAAATATGACAAAGGCAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11075713 19 + 30473821 CAAACTATGAAAAAGATGT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784087 6 - 149736546 --TACTAT----------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16610371 19 + 58134056 CAAAATATGAAAAAGTTGT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1858936 19 - 2187301 CAAACTAGGTAAAAACCAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 625371 52 + 2414909 I e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1387698 719 - 1467263 I e papAnu3.chr2 59565155 1543 + 187378091 I e nasLar1.chr2 57736337 1549 + 181502896 I e ponAbe2.chr3 69664494 1669 + 202140232 I e rhiBie1.NW_016820128v1 1241171 1516 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I e nomLeu3.chr21 67593753 0 + 86207423 C a score=9759.000000 s hg38.chrUn_KI270749v1 121780 1 + 158759 -T s panTro5.chr3 202009010 1 - 202621043 -T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777038 1 - 205426864 -T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7024 1 - 17846 -T i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69666163 1 + 202140232 -T i ponAbe2.chr3 I 1669 I 1567 s rheMac8.chr2 66074963 1 + 204787373 -T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006811 1 - 192460366 -T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119054 1 - 17224310 -T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430950 1 - 41321030 -T i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59566698 1 + 187378091 -T i papAnu3.chr2 I 1543 I 1286 s chlSab2.chr22 64502513 1 - 101219884 -T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888354 1 - 924385 -T i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57737886 1 + 181502896 -t i nasLar1.chr2 I 1549 I 1568 s colAng1.NW_012114711v1 6729369 1 - 10587913 -t i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1388417 1 - 1467263 -t i rhiRox1.KN296641v1 I 719 I 1568 s rhiBie1.NW_016820128v1 1242687 1 - 2311269 -T i rhiBie1.NW_016820128v1 I 1516 I 1577 s calJac3.chr15 46064297 1 - 98464013 -T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740546 1 + 27742158 -T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273381 1 - 4835464 -T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739334 1 + 4093027 -T i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11075732 1 + 30473821 -T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784093 1 - 149736546 -T i mm10.chr6 C 0 C 0 s canFam3.chr20 16610390 1 + 58134056 -C i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1858955 1 - 2187301 G- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 625371 52 + 2414909 I e micMur3.chr32 1627573 283 - 9149476 I e tarSyr2.KE939134v1 186950 588 + 958716 I e nomLeu3.chr21 67593753 0 + 86207423 C a score=139193.000000 s hg38.chrUn_KI270749v1 121781 17 + 158759 GGAATAGAAATAAAGCA s panTro5.chr3 202009011 17 - 202621043 GGAATAGAAATAAAGCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777039 17 - 205426864 GGAATAGAAATAAAGCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7025 17 - 17846 GGAATAGAAATAAAGCA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593753 3 + 86207423 --------------GCA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074964 17 + 204787373 GGAATAGAAATAAAGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006812 17 - 192460366 GGAATAGAAATAAAGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119055 17 - 17224310 GGAATAGAAATAAAGCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430951 17 - 41321030 GGAATAGAAATAAACCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502514 17 - 101219884 GGAATAGAAATAAAGCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888355 17 - 924385 GGAATAAAAATAAAGCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729370 17 - 10587913 ggaatagaaataaagca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064298 17 - 98464013 GCAATCGAACAAAGGCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740547 17 + 27742158 GCAATCAAAAGAAGGCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273382 17 - 4835464 GCAATTGAAAGAAGGCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739335 17 + 4093027 GCAATCGAAAGAAGGCA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11075733 16 + 30473821 GCAATGAAAAGAAGGC- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784094 16 - 149736546 GCCGTA-AAACAAGGCA i mm10.chr6 C 0 C 0 s canFam3.chr20 16610391 17 + 58134056 GCAATTTTAAAAAGGCA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1858956 14 - 2187301 GCAAT---AAGGAGGTA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 625371 52 + 2414909 I e micMur3.chr32 1627573 283 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=736954.000000 s hg38.chrUn_KI270749v1 121798 51 + 158759 AATATGT-TAAACATAACTGTAGCTTTGAGAAAGCATAAAGCAAGCCTGAAT s panTro5.chr3 202009028 51 - 202621043 AATATGT-TAAACATAACCGTAGTTTTGAGAAAGCATAAAGCAAGCCTGAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777056 51 - 205426864 AATATGT-TAAACATAACCGTAGTTTTGAGAAAGCATAAAGCAAGCCTGAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7042 51 - 17846 AATATGT-TAAACATAACCGTAGCTTTGAGAAAGCATAAAGCAAGCCTGAAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593756 51 + 86207423 AATATGT-TAAACATAACCGTAGCTTTGAGAAAGCATAAAGCAAGCCTGAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074981 51 + 204787373 GATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTGAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006829 51 - 192460366 GATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTGAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119072 51 - 17224310 GATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTGAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430968 51 - 41321030 AATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTAAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502531 51 - 101219884 AATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTGAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888372 51 - 924385 AATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTGAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729387 51 - 10587913 aatacgt-taaacataaccataGCTTTCAGAAAGCATAAAGCAAGTCTGAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064315 42 - 98464013 ATTATGT-TAAACATAACAGTAGCTTTGAGAAAGCCTAAAGTA--------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740564 51 + 27742158 AATATGT-TAAACATAACAGTAACTTTGAGAAAGCCTAAAGTAAGCCTGAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273399 51 - 4835464 AATATGT-TAAACATAACAGTAACTTTGAGAAAGCCTAAAGCAAGCCTGAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739352 51 + 4093027 AATATGT-TAAACATAACAGTAACTTTGAGAAAGCCTAAAGCAAGCCTGAAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1627856 51 - 9149476 AATGTGT-TAAATATAACAGTAGCTATGAGAAAGCACGAAGCAAGCATGAAT i micMur3.chr32 I 283 I 31 s proCoq1.NW_012148064v1 625423 51 + 2414909 AATATGT-TAAACATAACAGTAGCTGTGAGAAAGCACATAGCAAGCATGAAT i proCoq1.NW_012148064v1 I 52 C 0 s otoGar3.GL873534 11075749 51 + 30473821 AATTTGT-TCAACATAACTTAAGCTGTCAGAAAGCATTAAACAAGCCTGAGT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784110 52 - 149736546 AACATTTCTAAGAATAGCAGAGGCAGTGAGAAGACATAAATAAAGGCTGCAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16610408 51 + 58134056 ACTATGC-TAAGTATAACAGTAGCTGTGAGCCAGTATAAAGCAAGCCAAGAC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1858970 49 - 2187301 AATATGC-CAACTACAACAGTAGC--TGAGTGAGTTTAAAGCAATCCCGAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=86824.000000 s hg38.chrUn_KI270749v1 121849 7 + 158759 AAAAACT s panTro5.chr3 202009079 7 - 202621043 AAAAACT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777107 7 - 205426864 AAAAACT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7093 7 - 17846 AAAAACT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593807 7 + 86207423 AAAAACT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075032 7 + 204787373 AAAAACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006880 7 - 192460366 AAAAACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119123 7 - 17224310 AAAAACT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431019 7 - 41321030 AAAAATT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502582 7 - 101219884 AAAAACT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888423 7 - 924385 AAAAACT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729438 7 - 10587913 AAAAACT i colAng1.NW_012114711v1 C 0 C 0 s saiBol1.JH378125 27740615 7 + 27742158 CAAAACT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273450 7 - 4835464 CAAAACT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739403 7 + 4093027 CAAAACT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 625474 7 + 2414909 CAAAACT i proCoq1.NW_012148064v1 C 0 I 47 s otoGar3.GL873534 11075800 7 + 30473821 CAAAATC i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45784162 7 - 149736546 CCAAACT i mm10.chr6 C 0 C 0 s canFam3.chr20 16610459 7 + 58134056 TGAAACT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1859019 7 - 2187301 CAAAGCT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e micMur3.chr32 1627907 31 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I e calJac3.chr15 46064357 0 - 98464013 C a score=144190.000000 s hg38.chrUn_KI270749v1 121856 23 + 158759 TCT-ACTATTCCAGATGAAGAGAT s panTro5.chr3 202009086 23 - 202621043 TCT-ACTATCCCAGATGAAGAGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777114 23 - 205426864 TCT-ACTATCCCAGATGAAGAGAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7100 23 - 17846 TCT-ACTATTCCAGATGAAGAGAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593814 21 + 86207423 TCT-ACTATCCCAGAT--AAAGAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075039 24 + 204787373 TCCTACTATCCCAGATAAAGAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006887 24 - 192460366 TCCTACTATCCCAGATAAAGAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119130 24 - 17224310 TCCTACTATCCCAGATAAAGAGAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431026 24 - 41321030 TCCTACTATCCCAGATAAAGAGAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502589 23 - 101219884 TCC-ACTATCCCAGATAAAGAGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888430 24 - 924385 TCCTACTATCCCAGATAAAGAGAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729445 24 - 10587913 TCCTACTATCCCAGATAAAGAGAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064357 4 - 98464013 --------------------GGAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740622 24 + 27742158 TCCAACTATCCCAGACAAACAGAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273457 24 - 4835464 TCCTACTATCCCAGACAAACAGAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739410 24 + 4093027 TCCTACTATCCCACACAAACAGAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11075808 19 + 30473821 -CCTCGTAGCCTAAGCAACG---- i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45784169 16 - 149736546 CTTAAGTAGCTCAGAA-------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16610466 14 + 58134056 TCCTAGCAGCTCAG---------- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1859026 24 - 2187301 TCCTAGTAGTCCAGGCAAAAAGAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 625481 47 + 2414909 I e micMur3.chr32 1627907 31 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=261914.000000 s hg38.chrUn_KI270749v1 121879 21 + 158759 AATT---TTATGAAACATAAAAGG s panTro5.chr3 202009109 21 - 202621043 AATT---TTATGAAACATAAAAGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777137 21 - 205426864 AATT---TTATGAAACATAAAAGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7123 21 - 17846 AATT---TTATGAAACATAAAAGG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593835 21 + 86207423 AATT---TTACGAAACATAAAAGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075063 21 + 204787373 AATT---TTATGAAACATAAAAGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006911 21 - 192460366 AATT---TTATGAAACATAAAAGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119154 21 - 17224310 AATT---TTATGAAACATAAAAGG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431050 21 - 41321030 AATT---TTATGAAACATAAAAGG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502612 21 - 101219884 AATT---TTATGAAACATAAAAGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888454 21 - 924385 AATT---TTATGAAACATAAAAGG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729469 21 - 10587913 AATT---TTATGAAACATAAAAGG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064361 21 - 98464013 AATT---TTATAAAACATCAAATG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740646 21 + 27742158 AATT---TTATAAAACATCAAATG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273481 21 - 4835464 AATT---TTATAAAACATCGAATG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739434 21 + 4093027 AATT---TTATAAAACATCAAATG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1627938 21 - 9149476 AATT---TTATGAAGCATAAAAGG i micMur3.chr32 I 31 I 2 s otoGar3.GL873534 11075827 21 + 30473821 AATT---TTATGACACATAAAAGG i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45784185 21 - 149736546 ACTT---CCATGAATCATTAATTG i mm10.chr6 C 0 I 2 s canFam3.chr20 16610480 3 + 58134056 ---------------CAC------ i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1859050 24 - 2187301 AATTTTATTATTAAACATATAAGG i dasNov3.JH563077 C 0 I 2 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 625481 47 + 2414909 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=930685.000000 s hg38.chrUn_KI270749v1 121900 67 + 158759 ATATGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCATTCATG----TCTAAGTGAAAT-TTCTTACA s panTro5.chr3 202009130 67 - 202621043 ATATGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCATTCATG----TCTAAGTGAAAT-TTCTTACA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777158 67 - 205426864 ATATGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCATTCATG----TCTAAGTGAAAT-TTCTTACA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7144 67 - 17846 ATATGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCATTCATG----TCTAAGTGAAAT-TTCTTACA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593856 67 + 86207423 ATATGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCATTCATG----TCTAAGTGAAAT-TTCTTACA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075084 67 + 204787373 ATATGTCTG-TTGCTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006932 67 - 192460366 ATATGTCTG-TTGCTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119175 67 - 17224310 ATATGTCTG-TTGCTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431071 67 - 41321030 ATATGTCTA-TTGCTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502633 67 - 101219884 ATATGTCTA-TTGCTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCACG----TGTAAGTGAAAT-TTCTTACA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888475 67 - 924385 ATATGTCTA-TTACTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729490 67 - 10587913 ATATGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064382 68 - 98464013 ATATGTCTGTTTTTTGG-GGAAGTATTGTagtttttcttagcactcatg----tctaagtgaaat-ttcttaca i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740667 71 + 27742158 ATATGCCTG-GTTTTGG-GAAAGGATTTTAGTTTTTCTTAGCAGTCATGTCTATCTAAGCGAAAT-TTCTTACG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273502 71 - 4835464 ATATGCCTG-TTTTTGG-GGAAGGATTTAAGTTTTTCTTAGCACTCATGTCTATCTAAGTGAAAT-TTCTTACA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739455 67 + 4093027 ATATGCCTG-TTTTTTA-GGAAGGATTGTAGTTTCTCTTAGCACTCATG----TCTAAGTGAAAT-TTCTTACA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1627961 68 - 9149476 ATATGTCTG-TTTCTTGGGAAAGGATAGTAGTTTTTCCTAGCACCCGTG----TCTAAGTGAAAT-TTCCTACA i micMur3.chr32 I 2 I 252 s proCoq1.NW_012148064v1 625528 68 + 2414909 atatgtctg-tttcttgggggaggataatagtttttcctagcactcgtg----tctaagtgaaat-ttcttaca i proCoq1.NW_012148064v1 I 47 I 1507 s otoGar3.GL873534 11075850 68 + 30473821 ATATGTCCG-TTTCCTGAGGAAGGATGGTAGTTTTTCCTACCACTGGTA----TTTAAGTGAATT-TTCTTACA i otoGar3.GL873534 I 2 C 0 s mm10.chr6 45784208 65 - 149736546 ATTTACCTG-CTTCTTG-TGAAGA--TGATGATCCTTTTATCA-TCTTT----TGTAATTGGAATATTTTTATC i mm10.chr6 I 2 C 0 s canFam3.chr20 16610483 61 + 58134056 -----CCTG-TTTCTTA-GGGTGGAGGGCAGTTGTT-TTAGTATTCATG----TCTGAGGGAAAT-TTCTTACA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1859076 55 - 2187301 ATACGTCAG-CTTCTTG-------------ATTTTTGTTAGCACTCATC----TCTAAGGGAAAT-GTCGTACA i dasNov3.JH563077 I 2 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=1179530.000000 s hg38.chrUn_KI270749v1 121967 93 + 158759 CAGA--TGTACACAGAAAAGCAATATTA---TTTT-CTCCAATAAGAACACAGACTAGTGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCCA--- s panTro5.chr3 202009197 97 - 202621043 CAGA--TGTACACAGAAAAGCAATATTA---TTTT-CTCCAATAAGAACACAGACTAGTGACTCTTGATTGATCATCCACAGTGCATTACACTAAGCCAGCCA--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777225 93 - 205426864 CAGA--TGTACACAGAAAAGCAATATTA---TTTT-CTCCAATAAGAACACAGACTAGTGACTCTTGATTGATCATCCACGGTGCATTACACTA----AGCCA--- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7211 93 - 17846 CAGA--CGTACACAGAAAAGCAATATTA---TTTT-CTCCAATAAGAACACAGACTAGTGACTCTTGATTGATCATCCGCAGTGCATTACACTA----AGCCA--- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593923 98 + 86207423 CAGAGTTGTACACAGATAAGCAATATTATTGTTTT-CTCCAGTAAGAACACGTACTAGTGACTCTTGATTGATCATCCACAGCGCATTACACTA----AGCCA--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075151 98 + 204787373 CAGAGTTGTACACAGATAAGCAATATTATTGTTTT-CTCCAATAAGAACATAGACTAATGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCCA--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006999 98 - 192460366 CAGAGTTGTACACAGATAAGCAATATTATTGTTTT-CTCCAATAAGAACATAGACTAATGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCCA--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119242 98 - 17224310 CAGAGTTGTACACAGATAAGCAATATTATTGTTTT-CTCCAATAAGAACATAGACTAATGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCCA--- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431138 98 - 41321030 CAGAGTTGTACACAGATAAGCAATATTATTGTTTT-CTCCAATAAGAACATAGACTAATGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCCA--- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502700 98 - 101219884 CAGAGTTGTACACAGATAAGCAATATTATTGTTTT-ATCCAATAAGAACATAGACTAGTGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCCA--- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888542 98 - 924385 CAGAGTTGTACACAGATAAGCAATATTATTGTTTT-CTCCAATAAGAACATAGACTAATGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCCA--- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729557 98 - 10587913 CAGAGTTGTACACAGATAAGCAATGTTATTGTTTT-CTCCAATAAGAACATAGACTAGTGACTCTTGATTGAAAGTCCACAGTGCATTACACTA----AGCCA--- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064450 98 - 98464013 cagagttgtacacaAATAAGCAATATTATTGTTTT-ATTTGATAAGAACATAGACTACTGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGTCA--- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740738 98 + 27742158 CAGAGTTGTACACAAATAAGCAATATTACTGTTTT-ATCTGATAAGAACATAGACTGCTGACCCTTGATTGATCATCCACAGTGCATTATACTA----AGTCA--- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273573 98 - 4835464 CAGAGTTGTACACAAATAAGCAATATTATCATTTT-ATCCAATAAGAACGTAGACTACTGACCCTTGATTGATCATCCACAGTGCATTACACTA----AGTCA--- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739522 96 + 4093027 C--AATTGTACACAAATAAGCAATATTATTGTTTT-ATCCGATAAGAACATAGACTACTGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGTCA--- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11075918 92 + 30473821 TAGAGGTGTATATAG-TAAGCGATATTTTTTTTGT-CTTT-ATAAGACCATAGACTAGTGACTCTCAATTGGTCATCCACGGCACAT----CCA----AGTTG--- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784273 95 - 149736546 CAGAGTTGTTCATGGTAAA--AACATTCTT-CTTT-AACCTATAAGATCACAGACCAATAACTCTTAATTGATCACTTAGAGTATACTACACGG----AGCCA--- i mm10.chr6 C 0 C 0 s canFam3.chr20 16610544 98 + 58134056 TTGAGTTTTACACAGATAAGCAATATTCTTTTTTC-CTCCCAGAAGACCATAGACCAGCAGCTCTTAAATGATCATCAACAGTACATTACACTA----AGTCA--- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1859131 101 - 2187301 CTGAGTTGTACACAAATGAGCAATAATGTTTTTTTCCTCCTAGAAGCCCATAGACCAATGGCTTTT-ATTGATGATCCACAGTATAGAACATTA----AGACCATA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 625596 1507 + 2414909 I e micMur3.chr32 1628029 252 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=647203.000000 s hg38.chrUn_KI270749v1 122060 48 + 158759 TTTTACAAATGGGCTCTCAAATTTTGACATT--AGGGAAGTAAGTCAATT s panTro5.chr3 202009294 48 - 202621043 TTTTACAAATGGGCTCTCAAATTTTGACACT--AGGGAAGTAAGTCAATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777318 48 - 205426864 TTTTACAAATGGGCTCTCAAATTTTGACATT--AGGGAAGTAAGTCAATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7304 48 - 17846 TTTTACAAATGGGCTCTCAAATTTTGACATC--AGGGAAGTAAGTCAATT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594021 48 + 86207423 TTTTACAGATGAGCTCTCAAATTTTGACATT--AGGGAAGTAAGTCAATT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075249 48 + 204787373 TTTTACAAATGGGCTCTCAAATTTTGACATT--AGCGAAGTAAGTCAATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007097 48 - 192460366 TTTTACAAATGGGCTCTCAAATTTTGACATT--AGCGAAGTAAGTCAATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119340 48 - 17224310 TTTTACAAATGGGCTCTCAAATTTTGACATT--AGCGAAGTAAGTCAATT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431236 48 - 41321030 TTTTACAAATGGGCTCTCAAATTTTGACATT--AGTGAAGTAAGTCAATT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502798 48 - 101219884 TTTTACAAATGGGCTCTCAAATTTTGACATT--AGGGAAGTAAGTCAGTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888640 48 - 924385 TTTTACAAATGGGCTCTCAAATTTTGACATT--AGCGAAGTAAGTCAATT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729655 48 - 10587913 TTTTACAAATGGGCTCTCAAATTTTGACATT--AGGGAAGTAAGTCAATT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064548 48 - 98464013 TTTTACAAATGGGCTCTCAAATGTTAATGTT--AGGGAAGTAAGTCAGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740836 48 + 27742158 TGTTACAAATGTGCTCTCAAATGTTAATGTT--AGGGAAGTAAGTCAGTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273671 48 - 4835464 TGTTACAAATGGGCTCTCAAATGTTAATGTT--AGGGAAGTAAGTCAGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739618 48 + 4093027 TTTTACAAATGGGCTCTCAAATGTTAATGTT--AGGAAAGTAAGTCAGTT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 627103 47 + 2414909 TTTTACAAATGGGCTCTCAAATTGTGACTTT--TGT-AATTAAGTCAATT i proCoq1.NW_012148064v1 I 1507 C 0 s otoGar3.GL873534 11076010 47 + 30473821 TTTTACGAATGTGCTCTTAAATTCTGGCTTT--TGT-AAGGAAGTCAAtt i otoGar3.GL873534 C 0 I 276 s mm10.chr6 45784368 48 - 149736546 CTTTACTG-TAAGCCCT-GAATTTTGACCTTCATGGGACGTGTGTAAATA i mm10.chr6 C 0 C 0 s canFam3.chr20 16610642 48 + 58134056 TTTTACAAATGGGCTCCCAAATTTTGACCTT--AGATAAGGTAGCCAATG i canFam3.chr20 C 0 I 81 s dasNov3.JH563077 1859232 47 - 2187301 TTCTACAAG-GGGTTTCCAAATTTTGACCTC--TGTGAAGGTAGCCAATT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e micMur3.chr32 1628029 252 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=84277.000000 s hg38.chrUn_KI270749v1 122108 6 + 158759 TGAGCC s panTro5.chr3 202009342 6 - 202621043 TGAGCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777366 6 - 205426864 TGAGCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7352 6 - 17846 TGAGCC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594069 6 + 86207423 TGAGCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075297 6 + 204787373 TGAACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007145 6 - 192460366 TGAACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119388 6 - 17224310 TGAACC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431284 6 - 41321030 TGAACC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502846 6 - 101219884 TGAACC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888688 6 - 924385 TGAACC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729703 6 - 10587913 TGAACC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064596 6 - 98464013 TGAGCC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740884 6 + 27742158 TGAGCC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273719 6 - 4835464 TGAGCC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739666 6 + 4093027 TGAGTC i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 627150 6 + 2414909 CGAGCC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11076333 6 + 30473821 TGAACT i otoGar3.GL873534 I 276 C 0 s mm10.chr6 45784416 6 - 149736546 TCCACT i mm10.chr6 C 0 C 0 s canFam3.chr20 16610771 6 + 58134056 tgagtc i canFam3.chr20 I 81 I 127 s dasNov3.JH563077 1859279 6 - 2187301 TGAATC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e micMur3.chr32 1628029 252 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=58693.000000 s hg38.chrUn_KI270749v1 122114 5 + 158759 AAGAG s panTro5.chr3 202009348 5 - 202621043 AAGAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777372 5 - 205426864 AAGAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7358 5 - 17846 AAGAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594075 5 + 86207423 AAGAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075303 5 + 204787373 AAGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007151 5 - 192460366 AAGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119394 5 - 17224310 AAGAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431290 5 - 41321030 AAGAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502852 5 - 101219884 AAGAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888694 5 - 924385 AAGAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729709 5 - 10587913 AAGAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064602 5 - 98464013 AGGAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740890 5 + 27742158 AGGAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273725 5 - 4835464 AGGAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739672 5 + 4093027 AGGAG i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 627156 5 + 2414909 AAGAG i proCoq1.NW_012148064v1 C 0 I 49 s otoGar3.GL873534 11076339 5 + 30473821 AAGTA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784422 5 - 149736546 GTGTG i mm10.chr6 C 0 C 0 s canFam3.chr20 16610904 4 + 58134056 -AGAA i canFam3.chr20 I 127 I 1 s dasNov3.JH563077 1859285 5 - 2187301 AGGAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e micMur3.chr32 1628029 252 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=475326.000000 s hg38.chrUn_KI270749v1 122119 45 + 158759 TTTCAATAAAGCTA-TGCATG---AACATGAA---TCT-TGATA-TAGGTTAAG s panTro5.chr3 202009353 45 - 202621043 TTTCAATAAAGCTA-TGCACG---AACATGAA---TCT-TGATA-TAGGTTAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777377 45 - 205426864 TTTCAATAAAGCTA-TGCACG---AACATGAA---TCT-TGATA-TAGGTTAAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7363 45 - 17846 TTTCAATAAAGCTA-TGCACG---AACATGAA---TCT-TGATA-TAGGTTAAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594080 45 + 86207423 TTTCAATAAAGTTA-TGCACG---AACATGAA---TCT-TGATA-TAGATTAAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075308 45 + 204787373 TTTTAATGAAGTTA-TGCACA---AACATGAA---TCT-TGATA-TAGATTAAG i rheMac8.chr2 C 0 I 7 s macFas5.chr2 61007156 45 - 192460366 TTTTAATGAAGTTA-TGCACA---AACATGAA---TCT-TGATA-TAGATTAAG i macFas5.chr2 C 0 I 7 s macNem1.NW_012018021v1 11119399 45 - 17224310 TTTTAATGAAGTTA-TGCACA---AACATGAA---TCT-TGATA-TAGATTAAG i macNem1.NW_012018021v1 C 0 I 7 s cerAty1.NW_012009469v1 17431295 45 - 41321030 TTTTAATGAAGTTA-TGCACA---AACATGAA---TCT-TGATA-TAGATTAAG i cerAty1.NW_012009469v1 C 0 I 7 s chlSab2.chr22 64502857 45 - 101219884 TTTCAATGAAGTTA-TGCACA---AACATGAA---TCT-TGATA-TACATTAAG i chlSab2.chr22 C 0 I 7 s manLeu1.NW_012098965v1 888699 45 - 924385 TTTTAATGAAGTTA-TGCACA---AACATGAA---TCT-TGATA-TAGATTAAG i manLeu1.NW_012098965v1 C 0 I 7 s colAng1.NW_012114711v1 6729714 45 - 10587913 TTTCAATGAAGTTA-TGCACA---AACATGAA---TCT-TGATA-TAGATTAAG i colAng1.NW_012114711v1 C 0 I 7 s calJac3.chr15 46064607 45 - 98464013 TTTCAATGCAGTTA-TGCACA---AACATGAA---TCT-TGATA-CAGATTAAA i calJac3.chr15 C 0 I 12 s saiBol1.JH378125 27740895 45 + 27742158 TTTCAATGCAGTTA-TGCACA---AACATGAA---TCT-TGATA-CAGATTAAG i saiBol1.JH378125 C 0 I 12 s cebCap1.NW_016107467v1 273730 46 - 4835464 TTTCAATGCAGTTATTGCACA---AACATGAA---TCT-TGATA-TAGATTAAG i cebCap1.NW_016107467v1 C 0 I 12 s aotNan1.NW_018502033v1 3739677 45 + 4093027 TTTCAATGCAGTTA-TGCACA---AACATGAA---TCT-TGATA-TAGATTAAG i aotNan1.NW_018502033v1 C 0 I 12 s otoGar3.GL873534 11076344 49 + 30473821 TTTCAATGCAGACA-TGTATG---AACGCAAAAATTCTATGTTA-CAAATCCAA i otoGar3.GL873534 C 0 I 7 s mm10.chr6 45784427 21 - 149736546 -------------A-TGC--------TGCAAA---TCT-GAGCA-CAG------ i mm10.chr6 C 0 C 0 s canFam3.chr20 16610909 49 + 58134056 TATCAACACAGATA-TGTGCAAACAACATGTA---TCT-TGCTATTAGGGTAAA i canFam3.chr20 I 1 I 12 s dasNov3.JH563077 1859290 44 - 2187301 TCTCAAGGCAGATA-AATA-A---AACATGAA---TCT-TTCTT-TAGTATAAA i dasNov3.JH563077 C 0 I 13 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 627161 49 + 2414909 I e micMur3.chr32 1628029 252 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=800940.000000 s hg38.chrUn_KI270749v1 122164 56 + 158759 ATTCTGGATCTAGAGCAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAATTTTC---- s panTro5.chr3 202009398 56 - 202621043 ATTCTGGATCTAGAGCAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAATTTTC---- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777422 56 - 205426864 ATTCTGGATCTAGAGCAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAATTTTC---- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7408 56 - 17846 ATTCTGGATCTAGAGCAGCC-TTTGACCTCCATCTGCCTATAACAGACATAATTTTC---- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594125 56 + 86207423 ATTCTGGATCTAGAGCAGCC-TTTGACCCCCATCTGCCTAGAACAGACATAATTTTC---- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075360 56 + 204787373 ATTCTGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAATTTTC---- i rheMac8.chr2 I 7 C 0 s macFas5.chr2 61007208 56 - 192460366 ATTCTGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAATTTTC---- i macFas5.chr2 I 7 C 0 s macNem1.NW_012018021v1 11119451 56 - 17224310 ATTCTGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAATTTTC---- i macNem1.NW_012018021v1 I 7 C 0 s cerAty1.NW_012009469v1 17431347 56 - 41321030 ATTCCAGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACGTAATTTTC---- i cerAty1.NW_012009469v1 I 7 C 0 s chlSab2.chr22 64502909 56 - 101219884 ATTCTGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAATTTTC---- i chlSab2.chr22 I 7 C 0 s manLeu1.NW_012098965v1 888751 56 - 924385 ATTCCGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAATTTTC---- i manLeu1.NW_012098965v1 I 7 C 0 s colAng1.NW_012114711v1 6729766 56 - 10587913 GTTCTGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAATTTTA---- i colAng1.NW_012114711v1 I 7 C 0 s calJac3.chr15 46064664 56 - 98464013 ATTCTGGATCTAGAGCAGCC-TTTGACCTCCGTTTGCCTAGAACAGACATCATTTTT---- i calJac3.chr15 I 12 C 0 s saiBol1.JH378125 27740952 56 + 27742158 ATTCTGCATCTAGAGCAGCC-TTTGACCTCCATTTGCCTAGAACAGACATAATTTTC---- i saiBol1.JH378125 I 12 C 0 s cebCap1.NW_016107467v1 273788 56 - 4835464 ATTCTGGATCTAAAGCAGCC-TTTGACCTCCATTTGCCTAGAACAGACATAGTTTTC---- i cebCap1.NW_016107467v1 I 12 C 0 s aotNan1.NW_018502033v1 3739734 56 + 4093027 ATTCTGGATCTAGAGCAGCC-TTTGACCTCCATTTGCCTAGAACAGACATAATTTTC---- i aotNan1.NW_018502033v1 I 12 C 0 s proCoq1.NW_012148064v1 627210 55 + 2414909 ATTCTAGGTCTAGAGCAGCC-TTCTCCCTCCACCTACCTCGAGCAGATATAATTTT----- i proCoq1.NW_012148064v1 I 49 C 0 s otoGar3.GL873534 11076400 48 + 30473821 ATTCCAGGTCTAGCATAG-------CCCTCCAACTGCCTAGAGCAGATATAATTT------ i otoGar3.GL873534 I 7 C 0 s mm10.chr6 45784448 57 - 149736546 TGCTTGGCTCTAGAGTGGCCATTTCACCTCCATCTGCCGGGAGCAGGTGTCATTTTC---- i mm10.chr6 C 0 C 0 s canFam3.chr20 16610970 56 + 58134056 ATTCTAGGTTTAGAGCAGTC-CTCTATCTCCATCTGCCTAGAGCACTCATAATTTTC---- i canFam3.chr20 I 12 C 0 s dasNov3.JH563077 1859347 60 - 2187301 ATTCTGGATCTGCTGCGGCC-CCTTACCCTCATCTGTATAGAGCAGACATAAGCTTTTTTT i dasNov3.JH563077 I 13 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e micMur3.chr32 1628029 252 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=258451.000000 s hg38.chrUn_KI270749v1 122220 15 + 158759 TTTTCATTCATTTTT s panTro5.chr3 202009454 15 - 202621043 TTTTCATTCATTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777478 15 - 205426864 TTTTCATTCATTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7464 15 - 17846 TTTTCATTCATTTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594181 15 + 86207423 TTTTCATTCATTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075416 15 + 204787373 TTTTCATTCATTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007264 15 - 192460366 TTTTCATTCATTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119507 15 - 17224310 TTTTCGTTCATTTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431403 15 - 41321030 TTTTCATTCATTTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502965 15 - 101219884 TTTTCATTCATTTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888807 15 - 924385 TTTTCATTCATTTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729822 15 - 10587913 TTTTCATTCATTTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064720 15 - 98464013 TTTTCATTCATTTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741008 15 + 27742158 TTTTCATTCATTTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273844 15 - 4835464 TTTTCATTCATTTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739790 15 + 4093027 TTTTCATTCATTTTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1628281 15 - 9149476 TTTTCACTAATTTTT i micMur3.chr32 I 252 C 0 s proCoq1.NW_012148064v1 627265 15 + 2414909 TTTTCATTAATTTTT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11076448 15 + 30473821 GTTCCATTTATCTTT i otoGar3.GL873534 C 0 I 442 s mm10.chr6 45784505 15 - 149736546 TCTTCATAAATGTTT i mm10.chr6 C 0 I 5 s canFam3.chr20 16611026 15 + 58134056 TTTTCATTCGATTTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1859407 15 - 2187301 TTTTTTTCCAGTTTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=97867.000000 s hg38.chrUn_KI270749v1 122235 6 + 158759 GGTGAA s panTro5.chr3 202009469 6 - 202621043 GGTGAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777493 6 - 205426864 GGTGAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7479 6 - 17846 GGTGAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594196 6 + 86207423 GGTGAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075431 6 + 204787373 GGTGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007279 6 - 192460366 GGTGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119522 6 - 17224310 GGTGAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431418 6 - 41321030 GGTGAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502980 6 - 101219884 GGTGAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888822 6 - 924385 GGTGAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729837 6 - 10587913 GGTGAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064735 6 - 98464013 GGTGAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741023 6 + 27742158 GGTGAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273859 6 - 4835464 GGTGAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739805 6 + 4093027 GGTGAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1628296 6 - 9149476 GATGAA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 627280 6 + 2414909 GATGAA i proCoq1.NW_012148064v1 C 0 C 0 s mm10.chr6 45784525 6 - 149736546 TTTAAA i mm10.chr6 I 5 C 0 s canFam3.chr20 16611041 6 + 58134056 GGTGGA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1859422 6 - 2187301 GGTGAC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I e otoGar3.GL873534 11076463 442 + 30473821 I a score=425084.000000 s hg38.chrUn_KI270749v1 122241 28 + 158759 AAATATAGGCTGGTGTGATTATTTCTGT s panTro5.chr3 202009475 28 - 202621043 AAATATAGGCTGGTGTGATTATTTCTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777499 28 - 205426864 AAATATAGGCTGGTGTGATTATTTCTGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7485 28 - 17846 AAATATAGGCTGGTGTGATTATTTCTGT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594202 28 + 86207423 AAATATAGGCTGGTGTGATTATTTCTGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075437 28 + 204787373 AAGTATAGGCTGGTGTGATTACTTCTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007285 28 - 192460366 AAATATAGGCTGGTGTGATTACTTCTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119528 28 - 17224310 AAATATAGGCTGGTGTGATTACTTCTGG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431424 28 - 41321030 AAATATAGGCTGGTGTGATTATTTCTGG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502986 28 - 101219884 AAATATAAGCTGGTGTGATTATTTCTGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888828 28 - 924385 AAATATAGGCTGGTGTGATTATTTCTGG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729843 28 - 10587913 AAACATAGGCTGGTGTGATTATTTCTGG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064741 28 - 98464013 AAATATAGGATGGTGTGATTATTTCTAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741029 28 + 27742158 AAATATAGGCTGATGTGATTATTTCTGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273865 28 - 4835464 AAATACATGCCGGTGTGATTATTTCTGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739811 28 + 4093027 AAATATAGGCTGGTGTGATTATTTCTGT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1628302 28 - 9149476 CAATACAGTCAGATGTGATTATTTCGGT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 627286 28 + 2414909 AAATACAGTCCAGTGTGATTATTTCAGT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11076905 28 + 30473821 AAATGCAATCCAATGTAATTATTTTTGT i otoGar3.GL873534 I 442 C 0 s mm10.chr6 45784531 25 - 149736546 AAAAAC---TCACTGTGATTATTTCTGT i mm10.chr6 C 0 C 0 s canFam3.chr20 16611047 28 + 58134056 AAATCCAGCCTGGCGTGATTGTTTCTGT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1859428 28 - 2187301 AAGTGCAGCCCATTGTGGTTATTTCTGT i dasNov3.JH563077 C 0 I 7693 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I a score=120602.000000 s hg38.chrUn_KI270749v1 122269 8 + 158759 GATGTAAT s panTro5.chr3 202009503 8 - 202621043 GATGTAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777527 8 - 205426864 GATGTAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7513 8 - 17846 GATGTAAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594230 8 + 86207423 GACGTAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075465 8 + 204787373 GATGTAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007313 8 - 192460366 GATGTAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119556 8 - 17224310 GATGTAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431452 8 - 41321030 GAGGTAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503014 8 - 101219884 GATGTAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888856 8 - 924385 GAGGTAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729871 8 - 10587913 GATGTAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064769 8 - 98464013 GATGCAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741057 8 + 27742158 GATGCAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273893 8 - 4835464 GATGCAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739839 8 + 4093027 GATGCAAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1628330 8 - 9149476 GACGCAAT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 627314 8 + 2414909 GATGCAAT i proCoq1.NW_012148064v1 C 0 I 214 s otoGar3.GL873534 11076933 8 + 30473821 AATGCAAT i otoGar3.GL873534 C 0 I 11 s mm10.chr6 45784556 8 - 149736546 TGTGTGAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16611075 8 + 58134056 GATGCAAT i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I e dasNov3.JH563077 1859456 7693 - 2187301 I a score=631833.000000 s hg38.chrUn_KI270749v1 122277 47 + 158759 TCAATAACTAAAATGT-ACACTCTTGTCTCAAAGTCCTCAACATCACC s panTro5.chr3 202009511 47 - 202621043 TCAATAACTAAAATGT-ACACTCTTGTCTCAAAGTCCTCAACATCACC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777535 47 - 205426864 TCAATAACTAAAATGT-ACACTCTTGTCTCAAAGTCCTCAACATCACC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7521 47 - 17846 TCAATAACTAAAATGT-ACACTCTTGTCTCAAAGTCCTCAACATCACC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594238 47 + 86207423 TCAATAACTAAAAGGT-ACACTCTGGTCTCAAAGTCCTTAACATCACC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075473 48 + 204787373 TCAATAACTAAAATATCACACTCTTGTCTCAAAGTCCTCAACATCACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007321 48 - 192460366 TCAATAACTAAAATATCACACTCTTGTCTCAAAGTCCTCAACATCACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119564 48 - 17224310 TCAATAACTAAAATATCACACTCTTGTCTCAAAGTCCTCAACATCACC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431460 48 - 41321030 TCAATAACTAAAATATCACACTCTTGTCTCAAAGTCCTCAACATCACC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503022 48 - 101219884 TCAATAACTAAAATATCACACTCTTGTCTCAAAGTCCTCAACATCACC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888864 48 - 924385 TCAATAACTAAAATATCACACTCTTGTCTCAAAGTCCTCAACATCACC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729879 48 - 10587913 TCAATAACTAAAATATCACACTCTTGTCTCAAAGTCCTCAACATCACC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064777 48 - 98464013 CCAATTATGAAAATTTCACTCTCTTGTCTCAAAGTCCTCAACATCACC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741065 48 + 27742158 TCAATTATGAAAATTTCACACTCTTGTCTCAAAGTCCTCAACATCACC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273901 48 - 4835464 CCAATTATGAAAATGTCACACTCTTGTCTCAAAGTCCGCAACATCACC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739847 48 + 4093027 CCAATTATGAAAATTTCACACTTTTGTCTTAAAGTCCTCAACATCACC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1628338 48 - 9149476 ACAATTATTAAAATTTCACACTCTTGTCTCAAAGCCCCCAACATCAcc i micMur3.chr32 C 0 I 450 s otoGar3.GL873534 11076952 48 + 30473821 AAACTTATTAAAATTTCTCACCCTTGTCTCAATATCCCTAACATCACC i otoGar3.GL873534 I 11 C 0 s mm10.chr6 45784564 48 - 149736546 CTAAGTATTAAAATGCTATATCCTTGTCTCAGAATTCCAAACATCTCA i mm10.chr6 C 0 C 0 s canFam3.chr20 16611083 48 + 58134056 CCAATTACTAAAATTTCACACTTTTGTCTCAAAGTCCCCAATAccact i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 627322 214 + 2414909 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I e dasNov3.JH563077 1859456 7693 - 2187301 I a score=19376.000000 s hg38.chrUn_KI270749v1 122324 2 + 158759 TT s panTro5.chr3 202009558 2 - 202621043 TT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777582 2 - 205426864 TT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7568 2 - 17846 TT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594285 2 + 86207423 TT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075521 2 + 204787373 TT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007369 2 - 192460366 TT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119612 2 - 17224310 TT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431508 2 - 41321030 TT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503070 2 - 101219884 TT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888912 2 - 924385 TT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729927 2 - 10587913 TA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064825 2 - 98464013 TT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741113 2 + 27742158 TC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273949 2 - 4835464 CT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739895 2 + 4093027 TT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077000 2 + 30473821 CT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784612 2 - 149736546 TT i mm10.chr6 C 0 I 373 s canFam3.chr20 16611131 2 + 58134056 ct i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 627322 214 + 2414909 I e micMur3.chr32 1628386 450 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I e dasNov3.JH563077 1859456 7693 - 2187301 I a score=65007.000000 s hg38.chrUn_KI270749v1 122326 11 + 158759 GTCCTAAACTC s panTro5.chr3 202009560 11 - 202621043 GTCCTAAACTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777584 11 - 205426864 GTCCTAAACTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7570 11 - 17846 GTCCTAAACTC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594287 11 + 86207423 GTCCTATACTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075523 11 + 204787373 GTCCTATGCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007371 11 - 192460366 GTCCTATGCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119614 11 - 17224310 GTCCTATGCTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431510 11 - 41321030 GTCCTATGCTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503072 11 - 101219884 GTCCTATGCTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888914 11 - 924385 GTCCTATGCTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729929 11 - 10587913 GTCCTATACTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064827 11 - 98464013 GTCCTATAGTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741115 6 + 27742158 GTCCTA----- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273951 6 - 4835464 GTCCTG----- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739897 6 + 4093027 ATCCTG----- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077002 4 + 30473821 GGCC------- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16611133 11 + 58134056 gtcccaaactc i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 627322 214 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628386 450 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 186950 588 + 958716 I e dasNov3.JH563077 1859456 7693 - 2187301 I a score=5658.000000 s hg38.chrUn_KI270749v1 122337 1 + 158759 C s panTro5.chr3 202009571 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777595 1 - 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7581 1 - 17846 C i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594298 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075534 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007382 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119625 1 - 17224310 C i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431521 1 - 41321030 C i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503083 1 - 101219884 C i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888925 1 - 924385 C i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729940 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064838 1 - 98464013 C i calJac3.chr15 C 0 C 0 s tarSyr2.KE939134v1 187538 1 + 958716 T i tarSyr2.KE939134v1 I 588 I 1319 s canFam3.chr20 16611144 1 + 58134056 c i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 627322 214 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628386 450 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e otoGar3.GL873534 11077006 0 + 30473821 C e aotNan1.NW_018502033v1 3739903 0 + 4093027 C e cebCap1.NW_016107467v1 273957 0 - 4835464 C e dasNov3.JH563077 1859456 7693 - 2187301 I e saiBol1.JH378125 27741121 0 + 27742158 C a score=1353575.000000 s hg38.chrUn_KI270749v1 122338 132 + 158759 -TGGTCCAAGACCAATCTACCCTCCATCCTCTTGTTGCCTGGATCCCTTTTCTTTGTGGGTATGACCATTGGAGCACTGAAAAGATGATATAAGTGTCAGGTGAGTTGCATGTTATACATTTGATTTATGAGG--------------------------------- s panTro5.chr3 202009572 132 - 202621043 -GGGTCCAAGACCAATCTACCCTCCATCCTCTTGTTGCCTGGATCCCTTTTCTTTGTGGGTATGACCATTGGAGCACTGAAAAGATGATATAAGTGTCAGGTGAGTTCCATGTTATACATTTGATTTATGAGG--------------------------------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777596 132 - 205426864 -GGGTCCAAGACCAATCTACCCTCCATCCTCTTGTTGCCTGGATCCCTTTTCTTTGTGGGTATGACCATTGGAGCACTGAAAAGATGATATAAGTGTCAGGTGAGTTCCATGTTATACATTTGATTTATGAGG--------------------------------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7582 132 - 17846 -GGGTCCAAGACCAATCTACCCTCCATCCTCTTGTTGCCTGGATCCCTTTTCTTTGTGGGTATGACCATTGGAGCACTGAAAAGATGATATAAGTGTCAGGTGAGTTCCATGTTATACATTTGATTTATGAGG--------------------------------- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594299 132 + 86207423 -TGGTCCAAGACCAATCTACCCTCCAACCTCTTGTTGCCTGGGTCCCTTTTCTTTGTGGGTATGACCATTGGAGCACTGAAAAGATGATATAAGTGTCAGGTGAGCCCCATGTTATACATTTGATTTATGAGG--------------------------------- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075535 132 + 204787373 -TGGTCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATACGCGTCAGGTGAATTCCATGTTACACATTTGATTTATGAGG--------------------------------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007383 132 - 192460366 -TGGTCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATACGCGTCAGGTGAATTCCATGTTATACATTTGATTTATGAGG--------------------------------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119626 132 - 17224310 -TGGTCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATACGTGTCAGGTGAATTCCATGTTATACATTTGATTTATGAGG--------------------------------- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431522 132 - 41321030 -TGGTCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATAAGCGTCAGGTGAATTCCATGTTATACATTTGATTTATGAGG--------------------------------- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503084 132 - 101219884 -TGGTCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATAAACATCAGGTGAATTCCATGTTATACATTTGATTTATGAGG--------------------------------- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888926 132 - 924385 -TGGTCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATAAGCGTCAGGTGAATTCCATGTTATACATTTGATTTATGAGG--------------------------------- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729941 132 - 10587913 -TGGTCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGAACACTGACAAGATGATATAAGGGTCAGGTGAATTCCATGTTATACATTTGATTTATGAGG--------------------------------- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064839 129 - 98464013 -TGGTTTCAGAACAATCTACCCTCCACCCTCTTGTCACCTGGGTCCCTTTTCTTTGTGGGTATGACCGTTGGAGCACTGACAAGATGATT---GTGTCAGGTGAGTTCCATGTTATACATTGGATTTGTGAGG--------------------------------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741121 130 + 27742158 ---GTCTCAGAACAATCTACCCTTCACCCTCTTGTCGCCTGGGGCCCTTTTCTTTGTGGGTTTGACCGTTGGAGCACTGACAAGATGATGTAAGTGTCAGGTGAGTTCCATGTTATACATTTGATTTGTGAGG--------------------------------- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273957 130 - 4835464 ---GTCTCTGAACAATCTACCCTCCACCCTCTTGTCGCCTGGGTCCCATTTCTTTGTGGGTATGACCGTTGGAGCACTGACACGATGATGTAAGTGTCAGGTGAGTTCCATGTTATACATTTGATTTGGGAGG--------------------------------- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739903 126 + 4093027 ---GTCTCAGAACAATCTACCCTCCACCCTCTTGTCGCCTGGGTCCCTTTTCTTTGTGGGTATGACCGTTGGAGCACTGACAAGATGAT----GTGTCAGGTGAGTTCCATGTTATACATTTGATTTGTGAGG--------------------------------- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077006 127 + 30473821 -----CCCACAGCAATCTACCCTTCACCATCCTGCTGCTCATGTCCCCTTTGTCTGTGGGTGTGTCC-TTGGAGCACTCACAGGACTGTGTAAGGCTAAGGTAGGTTCTGTAGCACATCTTGGACTTGTGAGA--------------------------------- i otoGar3.GL873534 C 0 I 32 s canFam3.chr20 16611145 160 + 58134056 tggcccccaaagcgatctaccttccatactcttgttgctaggctcccctttatcagagtccttgac-----gagtactaagaagatggt-taagtcccagctaacttctgtagaataaggttcactcttgagaaaactctagtgtctttgccatggcaacctgagg i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 44223 1906 + 635616 I e eulMac1.LGHX01000499v1 44017 1906 + 631505 I e proCoq1.NW_012148064v1 627322 214 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628386 450 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e dasNov3.JH563077 1859456 7693 - 2187301 I a score=2420469.000000 s hg38.chrUn_KI270749v1 122470 168 + 158759 GAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATATTCCAGGACCATCTGTAAAAGGCAGGGATGAGA----GAGAGTTCAATGCCTTTCTCCTCCTCTTGATA--AGAAGGGGTAGGATTATGGAT------AACTACAACTTTGAG s panTro5.chr3 202009704 168 - 202621043 GAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCATTTTTCTCCTTTCCTTTTGTCCATATTCCAGGACCATCTGTAAAAGGCAGGGATGAGA----GAGAGTTCAATGCCTTTCTCCTCCTCTTGATA--AGAAGGGGTAGGATTATGGAT------AACTACAACTTTGAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777728 168 - 205426864 GAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCATTTTTCTCCTTTCCTTTTGTCCATATTCCAGGACCATCTGTAAAAGGCAGGGATGAGA----GAGAGTTCAATGCCTTTCTCCTCCTCTTGATA--AGAAGGGGTAGGATTATGGAT------AACTACAACTTTGAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7714 168 - 17846 GAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATATTCCAGGACCATCTGTAAAAGGCAAGGATGAGA----GAGAGTTCAATGCCTTTCTCCTCCTCTTGATA--AGAAGGGGTAGGATTATGGAT------AACTACAACTTTGAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594431 168 + 86207423 GAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCTTTTTTCTCCTTTCCTTTTCTCCATATTCCAGGACCATCTGTAAAAGGCAGGGATGAGA----GAGAGTTCAATGCCTTTCTCCTCCTCTTAATA--AGAAGGGGTAGGATTATGGAT------AACTACGACTTTGAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075667 168 + 204787373 GAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGATGAGA----GAGAGTTCAATGCCTTTCTCCTCCTCTTGATA--AGAAGGGGTAGGATTATGGAT------AACTACAACTTTGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007515 168 - 192460366 GAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGATGAGA----GAGAGTTCAATGCCTTTCTCCTCCTCTTGATA--AGAAGGGGTAGGATTATGGAT------AACTACAACTTTGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119758 168 - 17224310 GAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGAGGAGA----GAGAGTTCAATGCCTTTCTCCTCCTCTTGATA--AGAAGGAGTAGGATTATGGAT------AATTACAACTTTGAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431654 168 - 41321030 GAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGATGAGA----GAGAGTTCAATGCCTTCCTCCTCCTCTTGATA--AGAAGGGGTAGGATTATAGAT------AACTACAACTTTGAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503216 167 - 101219884 GAATGCAGGCTG-TTTGGGAATTTCCTCTAGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGATGAGA----GAGAGTTCAATGCCTTTCTCCTCCTCTTGATA--AGAAGGGGTAGGATTATGGAT------AACTACAACTTTGAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889058 174 - 924385 GAATGCAGGCCGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGATGAGA----GAGAGTTCAATGCCTTCCTCCTCCTCTTGATA--AGAAGGGGTAGGATTATGGATAACTACAACTACAACTTTGAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730073 165 - 10587913 GAATGCAGGCCGTTTTGGGAATTTCCTCTGGTACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATATTCCGGGACCATCTGTAAAAGGCAGGGATGAAA----GAGAGTTCAATGCCTTTCTCCTCCTCTTGAT-----AAGGGGTAGGATTATGGAT------AACTACAACTTTGAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064968 168 - 98464013 GAATACAGGCTGCTTTGGTAATTTCCTCTGGCACCTTAGCTGTTTTTTTCTTTTCCTTTTCTCCGTACTCCAGGACCATCTGTAAAAGGCAAGGATGAGA----GAGAATTCAATGCCTTTCTCCTCCTCTTGACA--TGAAGGGGTGGAATTATGGAG------AACTACAATTTTAAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741251 168 + 27742158 GAATACAAGCTGCTTTGGCAATTTCCTCTGGCACCTTAGCTGTTTTTTTCTTTTCCTTTTCTCCGTACTCCAGGACCACCTGTAAAAGGCAGGGATGAGA----GAGAATTCAATGCCTTTCTCCTCCTCTTGACA--TGAAGGGGTGGAATTACGGAG------AACTACAATTTTGAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274087 168 - 4835464 GAATACAGGCTGCTTTGGTAATTTCCTCTGGCACCTTAGCTGTTTTTTTCTTTTCTATTTCTCCGTACTCCAGGACCATCTGTAAAAGGCAGGAAGGAGA----GAGAATTCAATGCCTTTCTCCTCCTCTTGACA--TGAAGGGGTGGAATTATGGAG------AACTACAATTTTGAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740029 165 + 4093027 GAATACAGGCTGCTTTGGTAATTTTCTCTGGCACCTTAGCTGTTTTTTTCTTTTCCTTTTCTCTGTACTCCAGGACTATCTGTAAAAGGCAGGGATGAGA----GAGAATTCAATGCGTTT---CTCCTCTTGACA--TGAAGGGGTGGAATTACGGAG------AACTACAATTTTGAG i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 627536 168 + 2414909 gaatgcaggctgctttgggaattccctctggcaccttagccctcacccttctgtccctttctccATACTC-AGGGCCATCTGTAAAAGGCAGGCGAGAGG----GACAGTTCAGTGCCTTCCC-CTCCCCTTGGCATGGGAAGGAGTGAAATTATGGAT------AACTATAGCTTCAGA i proCoq1.NW_012148064v1 I 214 C 0 s eulMac1.LGHX01000499v1 45923 173 + 631505 gaatgcaggctgctttgagaattccctttggcaccttagccctcatccccctgtccctttctccATACTCTAGGGCCATCTGTAAAAGGCAGGCATGAGGGACAGACAGTTCAGTGCCTTCCT-CTCCCCTTGACATGGGAAGGAGTGAAATTATGGAT------AACTATAGCTTCAGA i eulMac1.LGHX01000499v1 I 1906 C 0 s eulFla1.LGHW01000501v1 46129 173 + 635616 gaatgcaggctgctttgagaattccctttggcaccttagccctcatccccctgtccctttctccATACTCTAGGGCCATCTGTAAAAGGCAGGCATGAGGGACAGACAGTTCAGTGCCTTCCT-CTCCCCTTGACATGGGAAGGAGTGAAATTATGGAT------AACTATAGCTTCAGA i eulFla1.LGHW01000501v1 I 1906 C 0 s otoGar3.GL873534 11077165 157 + 30473821 GAATGCA-GCTGCTTTGGAAATTCTCTCTGGTACCTTAGCCCACACCCTCT--TCCCTTTCTGCATACTCTA---------GTAAAAGGCAGGGGGAAAG----GATAGTTCAATGCCTTCCC-CCACCTTTGACATGGGAAGGAGTGAGCTTTTGGAT------AACTCCAGTTTCAGG i otoGar3.GL873534 I 32 C 0 s canFam3.chr20 16611305 151 + 58134056 gaacacaggctgctTTGGG-ATTTCCTCTGACACTTTAGCC---TCTTTCTTACACCTTTTTTCATGTTCTGTAGCCATATGTGAAAGGGAGGGGTAGGA----GACAGTTCGAATCCTTTTCTGTCCCCTTAGCATGGACAGAGGTAAGATTATGGAA--------------------- i canFam3.chr20 C 0 C 0 e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628386 450 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e dasNov3.JH563077 1859456 7693 - 2187301 I a score=1743402.000000 s hg38.chrUn_KI270749v1 122638 122 + 158759 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGGGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTGTCCTAGAAGGCCCTGCAGAAGCTGACTAA------AATGGGTAA s panTro5.chr3 202009872 122 - 202621043 AATTCTCCCTCTTCCCTTCTGTAGTCCTCTAGATGTGTTCCAGGGGATTGGGGTGTTCAGAAGTGGTGTTTTTGCTGTGCCCTGTCCTAGAAGGCCCTGCAGAAGCTGACTAA------AATGGGTAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777896 122 - 205426864 AATTCTCCCTCTTCCCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGGGGTGTTCAGAAGTGGTGTTTTTGCTGTGCCCTGTCCTAGAAGGCCCTGCAGAAGCTGACTAA------AATGGGTAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7882 122 - 17846 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGGGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTGTCCTAGAAGGCCCTGCAGAAGCTGACTAA------AATGGGTAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594599 122 + 86207423 AATTCTCCCTCTTACATTCTATAGTCCTCTAGATGTGGTCCAGGGGATTGGAGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTTTCCTAGAAGGCCCTGCAGAAGCTGACTAA------AATGGGTAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075835 122 + 204787373 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGAAGAAACTGACTAA------AATGGGTAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007683 122 - 192460366 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGAAGAAACTGACTAA------AATGGGTAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119926 122 - 17224310 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGAAGAAGCTGACTAA------AATGGGTAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431822 122 - 41321030 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGCAGAAGCTGACTAA------AATGGGTAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503383 122 - 101219884 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGCAGAAGCTGACTAA------AATGGGTAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889232 122 - 924385 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGCAGAAGCTGACTAA------AATGGGTAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730238 122 - 10587913 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGAGGTGTTTTTGCTGTGCCCTCTCCTCGAAGGCCCTGCAGAAGCTGACTAA------AATGGGTAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065136 122 - 98464013 AATTCTCCCTCTTACCTTCTGTTGTCCTCTAGATGTGGTCCAGGGGATTGGGGTTTTCAGAAATGGTGTTTTTGCTGTGCCCTTTTCTAGCAGGTCCTAAAGAAGCTGAATAC------AATGGGTAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741419 122 + 27742158 AATTCTCCCTCTTACCTTCTGTTGTCCTCTAGATATGGTCCAGGGGATTGGGGTTTTCAGAAATGGTGTTTTTGCTGTGCCCTTTCCTAGCAGGCCCTGCAGAAGCTGACTAC------AATGGATCA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274255 122 - 4835464 AATTCTCCCTCTTACCTTCTGTTGTCCTCTAGACGTGGTCCAGGGGATTGGGGTTTTCAGAAATGGTGTTTTTGCTGTGCCCTTTCCTAGCAGGCCCTGCAGAAGCTGGCTAC------AATGGGTAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740194 122 + 4093027 AATTCCCCCTCTTACCTTCTGTTGTCCTCTAGATGTGGTCCAGGGGATTGGGGTTTTCAGAAATGGTGTTTTTGCTGTGCCCTTTCCTAGTGGGCCCTGCAGAAGCTGACTAC------AATGGGTAA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 627704 113 + 2414909 AATTCTCCATCTTCCCTTTTGTCGTCTTGTAGATGTGGTCT--GGGGTTGGGATCGGCAGAAGTGAT-------------TCTTTCCTAGCAGGCCCTGCAGTAGCTGACGAGCATTCCAATGGATAT i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 46096 113 + 631505 AATTCTCCATCTTCCCTTCTGTCGTCTTGTATATGTGGTCT--GGGGTTGGGATTGTCAGTAGTGAT-------------TCTTTCCTAGCGGGCCCTGCAGTAGCTGACTAGCATTCCAATAGGTAT i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 46302 113 + 635616 AATTCTCCATCTTCCCTTCTGTCGTCTTGTATATGTGGTCT--GGGGTTGGGATTGTCAGTAGTGAT-------------TCTTTCCTAGCGGGCCCTGCAGTAGCTGACTAGCATTCCAATAGGTAT i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11077322 111 + 30473821 AGTGCTCCATCTTCCCTTCTGTTATCTTCTAGATGTGGTCT--GGGGTTGAGATT-TCAGAAGTGAT-------------GCTTCCCTA-CAGGCCCTGCAGTAGTTGCCTAGCATTCCAATGGATAT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16611456 117 + 58134056 --TTCTCGGCCTTTCCTCT-----ACCTCTAAATG----CCCAGAGACTTGGGCTTCCAGAAGTGATACTTTTTCAGTACCTTTTCCTAGCAAGCTCTGCAGTCGCTGACTGGCACAACAGTGGGCAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1867149 115 - 2187301 AATTCTCTACTTTTCCCTCTCTGTTCCTCTAAATGTGGTCCAACGGGGTGGGGTCTTAAGAAGAGAT------------TCCTTTCCTAGCAGGCCA-GCACTAGCTGACTGGCATCATAATGGGTTT i dasNov3.JH563077 I 7693 C 0 e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628386 450 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=341877.000000 s hg38.chrUn_KI270749v1 122760 18 + 158759 TTTTCTGAACTTAG-AAAT s panTro5.chr3 202009994 18 - 202621043 TTTTCTGAACCTAG-AAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778018 18 - 205426864 TTTTCTGAACCTAG-AAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8004 18 - 17846 TTTTCTGAACTTAG-AAAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594721 18 + 86207423 TTTTCTGAACCTAG-AAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075957 18 + 204787373 TTTTCTGAACCTAG-AAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007805 18 - 192460366 TTTTCTGAACCTAG-AAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120048 18 - 17224310 TTTTCTGAACCTAG-AAAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431944 18 - 41321030 TTTTCTGAACCTAG-AAAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503505 18 - 101219884 TTTTCTGAAGCTAG-AAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889354 18 - 924385 TTTTCTGAACCTAG-AAAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730360 18 - 10587913 TTTTCTGAACCTAG-AAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065258 18 - 98464013 TTTTCTGAACCTAG-AAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741541 19 + 27742158 TTTTCTGAACCTAGAAAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274377 18 - 4835464 TTTTCTGAACGTAG-AAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740316 18 + 4093027 TTTTCTGAACCTAG-AAAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1628836 18 - 9149476 TTTTCTGAACCTAG-AAAC i micMur3.chr32 I 450 I 1 s proCoq1.NW_012148064v1 627817 18 + 2414909 TTTTCTGAACCTAG-AAAT i proCoq1.NW_012148064v1 C 0 I 1 s eulMac1.LGHX01000499v1 46209 17 + 631505 CTTTCTGAA-CTAG-AAAT i eulMac1.LGHX01000499v1 C 0 I 825 s eulFla1.LGHW01000501v1 46415 17 + 635616 CTTTCTGAA-CTAG-AAAT i eulFla1.LGHW01000501v1 C 0 I 825 s otoGar3.GL873534 11077433 18 + 30473821 TTTTATGAACCTAG-AAAT i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16611573 18 + 58134056 TTTTCTGAACCTGG-AAGT i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1867264 18 - 2187301 TTTCCTGAATCTAG-GAAT i dasNov3.JH563077 C 0 I 22 e mm10.chr6 45784614 373 - 149736546 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=1709584.000000 s hg38.chrUn_KI270749v1 122778 109 + 158759 TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCACGGAAGCAAGAAACAGTCCTCAAAGGCACTTTATAACTGATACCATATAAAAA-CAATTTTTGCTACATTTGA s panTro5.chr3 202010012 109 - 202621043 TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCTCAAAAGCACTTTATAACTGATACCAtataaaaa-caatttttgctacatttga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778036 109 - 205426864 TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCTCAAAAGCACTTTATAACTGATACCAtataaaaa-caatttttgctacatttga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8022 109 - 17846 TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCTCAAAAGCACTTTATAACTGATACCATATGAAAA-CAATTTTTGCTACATTTGA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594739 109 + 86207423 TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGAGAAGCAAGAAACAGTCCTCAAAAGCACTTTATAACTGATACTACATAAAAA-CAATTTTTGCTACATTTGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075975 109 + 204787373 TGGAACACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCGCAAAAACACTTTATAACtgataacatataaaaa-caatttttgctacctttga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007823 109 - 192460366 TGGAACACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCGCAAAAACACTTTATAACTGATAACATATAAAAA-CAATTTTTGCTACCTTTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120066 109 - 17224310 TGGAACACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCGCAAAAACACTTTATAACtgataacatataaaaa-caatttttgctacctttga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431962 109 - 41321030 TGGAACACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCGCGAAAACACTTTATAACtgataacatataaaaa-caatttttgctacctttga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503523 109 - 101219884 TGGAGCACTTAGTTTACTCTGCTTGTCAGTATTCATAGGGAAGCAAGAAACAGTCTGCAAAAACACTTTATAAATGATAACATATAAAAA-CAATTTTTGCTACCTTTGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889372 109 - 924385 TGGAACACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGTAAGAAACAGTCCGCAAAAACACTTTATAACtgataacatataaaaa-caatttttgctacctttga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730378 109 - 10587913 TGGAGCATGTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAATAGTCCACAAAAACACTTTGTAACTGATAACATATAGAAA-CAatttttgctacatttga i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065276 109 - 98464013 TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAGGCAAGAAACGGTCCTCAAAAGCACTTTATACCTGATACCATATAAAAC-CAATTTTTGCTACATTTGA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741560 109 + 27742158 TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCTCAAAAGCACTTTATACCTAATACCATGTAAAAC-CAATTTTTGCTACATTTGA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274395 109 - 4835464 TGGAGCACTTAGTTTACTCTGCTTGCCAGCATTCTCAGGGAAGCAAGAAACGGTCCTCAAAAGCACTTTATACCTGATACCAtataaaac-caatatttgctacatttga i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740334 109 + 4093027 TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACGGTCCTCAAAAGCACTTTATACCTGATACCAtataaaac-caatttttgctacatttga i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1628855 110 - 9149476 TGGAGCACTTGGTTTGCTCTGCTTGCCTGCATTGTCAGGGAAGGAAGAAACAGTCCTCAGAAGCACTTTATAGCTGATACCATGTAAAAACCGATTTTTACTACATTTGA i micMur3.chr32 I 1 I 546 s proCoq1.NW_012148064v1 627836 110 + 2414909 TGGAGCACTTGGTTTATTCGGCTCGTCTACGTTGGCGGGGAAGGAAGAAACAGTCCTCAAAAGCACTATATAGCTGATACCATGTAAAAAATGATTTTTACTACATTTGA i proCoq1.NW_012148064v1 I 1 C 0 s otoGar3.GL873534 11077452 110 + 30473821 TGAGGCGCTTGGTGTATTCTGCTTATCTGCATTGTCAGGGAAGGAAGAAACAGTCCTCAGAAGCACTTTATAACTGATGCCACGTGAAAACCGACTTTGACTACATTTGA i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16611592 110 + 58134056 TGGAACACTTAGTTTACTCTGCTTTTCAGTATTGTCAGGAAAGCAAGAAACAGTTTTCAAAAGTGCTTTCTACCTGACACCATATGAAAACCAATTTTTGCTACGTTTGA i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1867304 108 - 2187301 TGGAACTCTTAGTTTATGCT--TTGTCAGCATTTTCAGGGAAGCAGGAAACAATCCTCAAAATCACTTTTTACCTGATACAGTATGAAAATTTATTTTTGCTACATGTGA i dasNov3.JH563077 I 22 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=2146078.000000 s hg38.chrUn_KI270749v1 122887 165 + 158759 CATGACATACTCTT-ACAGTGATGTC--TC--TGGCAGAACAATGCAC---------------ACTCAGTGAGTTGAGGAACAAGTTGCTGCAAAGAAGTGATAAGGCTTCATGTAAAGGCATGCTAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGACTGT s panTro5.chr3 202010121 165 - 202621043 cacgacatactctt-acagtgatgtc--tc--tggcagaacaatgcac---------------actcagtgagttgtggaacaacttgctgcaaagaagtgataaggcttcatgtaaaggcacgctagtgttaaagaaagatgccctatatgccagaaattgtaagaaatttgcattatgactgt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778145 165 - 205426864 catgccatactctt-acagtgatgtc--tc--tggcagaacaatgcac---------------actcagtgagttgtggaacaacttgctgcaaagaagtgataaggcttcatgtaaaggcacgctagtgttaaagaaagatgccctatatgccagaaattgtaagaaatttgcattatgactgt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8131 165 - 17846 CACAACATACTCTT-ACAGTGATGTC--TC--TGGCAGAACAATGCAC---------------ACTCAGTGAGTTGAGGAACAAGTTGCTGCAAAGAAGTGATAAGGCTTCATGTAAAGGCATGCTAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGACTGT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594848 165 + 86207423 CATGACATACTCTT-ACAGTGATGTC--TC--TGGCAGAACACTGCAC---------------ACTCAGTGAGTTGAGGAACAAGTTGCTGCAAAGAAATGATAAGGCTTCATGTAAAGGCATGCTAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAACTTGCATTATGACTGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076084 164 + 204787373 cactacatactctt-acagtgatgtc--tc--tggcagaacattgta----------------actcggtgggttgAGGAATAAGTTTCTGCAATGAAGTGATAAGGTTTCATGTAAAGTCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGGCTGT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61007932 164 - 192460366 CACTACATACTCTT-ACAGTGACGTC--TC--TGGCAGAACATTGTA----------------ACTCGGTGGGTTGAGGAATAAGTTTCTGCAATGAAGTGATAAGGTTTCATGTAAAGTCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGGCTGT i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11120175 164 - 17224310 cactatatactctt-acagtgatgtc--tc--tggcagaacattgta----------------actcggtgggttgAGGAATAAGTTTCTGCAATGAAGTGATAAGGTTTCATGTAAAGTCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGGCTGT i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17432071 165 - 41321030 cactacatactctt-acagtgatgtc--tc--tggcagaacattgTAC---------------ACTCGGTGGGTTGAGGAATAAGTTTCTGCAATGAAGTGATAAGGTTTCATGTAAAGGCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCGTTATGGCTGT i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64503632 165 - 101219884 CACTACATACTCTT-ACAGTGATGTC--TC--TGGCAGAACAATGTAC---------------ACTCAGTGGGTTGAGGAGTAAGTTTCTGCAATGAAGTGATAAGGCTTCATGTAAAGGCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGGCTGT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 889481 165 - 924385 cactacatactctt-acagtggtgtc--tc--tggcagaacattgTAT---------------ACTCGGTGGGTTGAGGAACAAGTTTCTGCAATGAAGTGATAAGGTTTCATGTAAAGGCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCGTTATGGCTGT i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6730487 165 - 10587913 cactacatactctt-acagtgatgtc--tc--tggcagaacgttgtac---------------actcagtgggttgAGGAATAAGTTTCTGCAAAGAAGTGATAAGGCTTCATGTAAAGACATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGGCTGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065385 165 - 98464013 CATGACATACTCTT-ACAGTGATGTC--TC--TGGCAGAACATTGCAT---------------ACTCCGTGGGTTGGGGAACAAGTTGCTGCAAAGAAGTGATAAGGCTTCTTGTAAAAGCATGCTAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTATAAGAAATTTGCATTATGACTAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741669 165 + 27742158 CATGACATACTCTT-ACAGTGATGTC--TC--TGGCAGAACATTGCAT---------------ACTCAGTGGGTTGGGGAACAAGTTGCTGCAAAAAAGTGATAAGGCTTCTTGTGAAAGCATGCTAGTGTTAAAGAAAGATGCCCTCTATGCCAGAAATTATAAGAAATTTGCATTATGACTAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274504 165 - 4835464 catgacatactctt-acagtgatgtc--tc--cggcagaacattgcat---------------actcagtgggttgcggaacAAGTTGCTGCAAAGAAGTGATAAGGCTTCTTGTAAAAGCATGCTAGTGTTAAAGAAAGATGCCCTCTATGCCAGAAATTATAAGAAATTTGCATTATGACTAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740443 165 + 4093027 catgacatactctt-acagtgatgtc--tc--tggcagaacattgcat---------------actcagtgggttgGGAAACAAGTTGCTGCAAAGAAGTGATAAGGTTTCTTGTAAAAGCATGCTAGTGTTAAAGAAAGATGTCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGACTAT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 627946 151 + 2414909 GGCAACACACTCTCAAAAGTGGTGTC--TCTGTGGTAGAATATCGCAC---------------ATTCGG----------------ttgctgcaaggaagcgataaggcttcgtgtaaaggcatattagtgtaaaagaaagacgccctat-ggccagaaattgtaagatgtctgcattatgactgc i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11077562 148 + 30473821 GGCAACACA--TTCAACAGTGGTGTC--TCCCTGGTAGGACATTGTAC---------------ATTCAG----------------TTACTGCCAGGAAGTGATAAGGCTTCCCA-AAAGGAATACTAGTGGCAAAGAAAGACTCTGACG-TGCCAGAAATTGTAAGAAATTTGCATTATGACGAC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16611702 165 + 58134056 GACAACACACTCTT-ACAGTGTGCTC--TC--TGGTAGAGCATTGCTC---------------ATTCAGCCGGGCTGGGAGTAAGTTGCTGCAAGGAAGCGATAAGGCTTAATATAAAGGCACACTAGTGTTAAAGAAAGATATCTTGTATGCTAGACACTGTAAGAAATTTGCATCACGACTTG i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1867412 182 - 2187301 GACAACACATTCTT-ACAGTGATTGCTGTC--TGGTAGAACATTGCACCGAGTGAGTTGTTGGACAGAGTGGGGTAGGGAATGAATTGCTGCAAGTAAGCGATAACCTTTTATATAAAGGCAAGCTAGTGTTAAAGAAATATTCCTCATATGCTGAAAATTATAAGAAATTTGCATCATGACTAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59566699 1286 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=3259.000000 s hg38.chrUn_KI270749v1 123052 1 + 158759 A s panTro5.chr3 202010286 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778310 1 - 205426864 a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8296 1 - 17846 A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595013 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076249 1 + 204787373 G i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61008097 1 - 192460366 G i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11120340 1 - 17224310 G i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17432237 1 - 41321030 G i cerAty1.NW_012009469v1 I 1 C 0 s papAnu3.chr2 59567985 1 + 187378091 G i papAnu3.chr2 I 1286 I 293 s chlSab2.chr22 64503798 1 - 101219884 A i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 889647 1 - 924385 G i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6730652 1 - 10587913 G i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46065550 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741834 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274669 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740608 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 628097 1 + 2414909 a i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11077710 1 + 30473821 C i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1867594 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e canFam3.chr20 16611867 2 + 58134056 I a score=891298.000000 s hg38.chrUn_KI270749v1 123053 69 + 158759 TCAGAGAATATGGTCAGGACAGTAAAGAGTTTTTTGG-TTCTCCTCAAATTAAAAACAACTAATTCAATA s panTro5.chr3 202010287 69 - 202621043 tcagagaatacggtcaggacagtaaagagttttTTGG-TTCTCCTCAAATTAAAAACAACTAATTCAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778311 69 - 205426864 tcagagaatatggtcaggacagtaaagagttttTTGG-TTCTCCTCAAATTAAAAACAACTAATTCAATA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8297 69 - 17846 TCAGAGAATATGGTCAGGACAGTAAAGAGTTTTTTGG-TTCTCCTCAAATTAAAAACAACTAATTCAATA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595014 69 + 86207423 TCAGAGAATATGGTCAGGACAGTAAAGAGTTTTTTGG-TTCTCCTCAAATAACAAACAACTAATTCAATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076250 70 + 204787373 TCAGAGAATATAGTCAGGACAGTAAAGAGTTTTTTGGATTCTCCTCAAATAACAAACAACTAATTCAATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008098 70 - 192460366 TCAGAGAATATAGTCAGGACAGTAAAGAGTTTTTTGGATTCTCCTCAAATAACAAACAACTAATTCAATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120341 70 - 17224310 TCAGAGAATATAGTCAGGACAGTAAAGAGTTTTTTGGATTCTCCTCAAATAACAAACAACTAATTCAATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432238 70 - 41321030 TCAGAGAATATAGTCAGGACAGTAAAGAGTTTTTTGGATTCTCCTCAAATAACAAACAACTAATTCAATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503799 70 - 101219884 TCAGAGAATATGCTTAGGACAGTAAAGAGTTTTTTGGGTTCTCCTCAAATAACAAACAACTAATTCAATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889648 70 - 924385 TCAGAGAATATAGTCAGGACAGTAAAGAGTTTTTTGGATTCTCCTCAAATAACAAACAACTAATTCAATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730654 70 - 10587913 TCAGAGAATATGGTCAGGACAGTAAAGAGTTTTTTTGGTTCTCCTCAAATAACAAACAACTAATTCAATA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46065551 69 - 98464013 TCAGAGAATATGATAAGTATAGTAAAGAGTTTTTTAG-TTCTTCTCAAATCACAGACAACTAATTCAATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741835 69 + 27742158 TCAGAGAATATGATCAGTATAGTAAAGAATTTTTTAG-TTCTTCTCAAATCACAAACAACTAATTCAACA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274670 69 - 4835464 TCAGAGAGTACGATGAATATAGTAAAGAGTTTTTTAG-TTCTTCTCAAATCACAAACAACTAATTCAATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740609 69 + 4093027 TCAGAGAATATGATCAGTATAGTAAAGAGTTTTTTAG-TTCTTCTCAAATCACAAACAACTAATTCAATA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 628098 69 + 2414909 taagagaatgtggtcaggacagtaaagaggttttcag-ttcttttcaaataacaaacaatTGATTCAATA i proCoq1.NW_012148064v1 C 0 I 155 s otoGar3.GL873534 11077711 68 + 30473821 TAAGAGAATATGGTCCGGACAGTAAAGAGAGTTTAAG-TTCTTTTCAAATAACAAACAATTGCTATGAT- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16611869 69 + 58134056 CAAGAAAATATGGTCAGGACAGTAAAGAGTTCTTTAG-CTCTTCAAAAATCACAAACAAATTTTTCAATA i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1867595 61 - 2187301 --AGAAAATGTGGTTGGGACAGC--AGAGTTCTTCAG-TTCTTCACAAATAACAAA----TTCTTCTGTA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59567986 293 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=1522353.000000 s hg38.chrUn_KI270749v1 123122 135 + 158759 AGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACTTTAA---TTCCT-TCAAGAGTGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTGCAAACACC-AA--AGGTTGAC-AATCAAAGTTTTAAGTCAA---------------------CATG s panTro5.chr3 202010356 135 - 202621043 AGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACtttaa---ttcct-tcaagagtgtcattaaataattcag---------------tttttttaa---gtatcctgcaaacacc-aa--aggttgac-aatcaAAGTTTTAAGTCAA---------------------CATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778380 135 - 205426864 AGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACtttaa---ttcct-tcaagagtgtcattaaataattcag---------------tttttttaa---gtatcctgcaaacacc-aa--aggttgac-aatcaAAGTTTTAAGTCAA---------------------CATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8366 135 - 17846 AGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACtttaa---ttcct-tcaagagtgtcattaaataatccag---------------tttttttaa---gtattctgcaaacacc-aa--aggttgac-aatcaAAGTTTTAAGTCAA---------------------CTTG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595083 154 + 86207423 AGTATGGAAATA-TGTTTCCGATATTCTA-----TAACTTTTTTATATTTTAA---TTCCA-TCAACAGTGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTGCAAACACC-AA--AGGTTGAC-AATCAAAGTTTTAAGTTGAAGGTCTGTAGCCATTTCCC--AACG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076320 156 + 204787373 AGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACTTTAA---TTCCA-TCAAGAGTGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTTCAAACACC-AA--AGGCTGAC-AATCAAAGTTTTAAATCGAAGCTCTGTAGCCATTTCATAACATG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008168 156 - 192460366 AGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACTTTAA---TTCCA-TCAAGAGTGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTTCAAACACC-AA--AGGCTGAC-AATCAAAGTTTTAAATCGAAGCTCTGTAGCCATTTCATAACATG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120411 156 - 17224310 AGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACTTTAA---TTCCA-TCAAGAATGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTTCAAACACC-AA--AGGCTGAC-AATCAAAGTTTTAAATCGAAGCTCTGTAGCCATTTCATAACATG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432308 156 - 41321030 AGTATGGAAATA-TGTTTTCAATATTCTG-----TAACTTTTTTATACTTTAA---TTCCA-TCAAGAGTGTCAATAAATAATCCAG---------------TTTTTTTAA---GTATCCTGTAAACACC-AA--AGGCTGAC-AATCAAAGTTTTAAATTGAAGCTCTGTAGCCATTTCACAACATG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503869 164 - 101219884 AGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACTTCAA---TTCCA-TCAAGAGTGTCATTAAATAATCCAG-------TTTTTTTTTTTTTTTAA---GTATCCTGCAAACACC-AA--AGGTTGAC-AATCAAAGTTTTAAATTGAAGGTCTGTAGCCATTTCACAACATG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889718 156 - 924385 AGTATGGAAATA-TGTTTTCAATATTCTG-----TAACTTTTTTATACTTTAA---TTCCA-TCAAGAGTGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTGTAAACACC-AA--AGGCTGAC-AATCAAAGATTTAAATTGAAGCTCTGTAGCCATTTCACAACATG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730724 155 - 10587913 AGTATGGAAATA-TGTTTTCAATATTCTG-----TAAC-TTTTTACACTTTAA---TTCCA-TCAAGAGTGTCATTAAATAATCCAG----------------TTTTTTAA---GTATCCTGCAAACACC-AA--AGGTTGACAAATCAAAGTTTTAAATTGAAGGTCTGTAGCCATTTCACAACATG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065620 157 - 98464013 AGGGTGGGAATG-TGTACTCAATAGTCTA-----TAACTTTTTTATGCTTTAA---TTTCA-ACAGGAGTGCCATTAAATAATCCAA---------------TTTTTTTAA---GTATCTTGCAAACACA-AAAGAGGTTGAC-AATTAAAGTTTTATGTTGAAGG-CTGTAGCCATTTCCCAACAGG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741904 163 + 27742158 AGTGTGGGAATA-TGTCCTCAATATTCTA-----TAACTTTTTTATACTTTAA---TTTCA-ACAAGAGTACCATTAAATAATTCAG--------TTTTTTTTTTTTTTAA---GTATCCCGCAAACACA-AA--AGGTTGAC-AATCAAAGTTTTAAATTGAAGGCCTATAGCCATTTCCCAACAGG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274739 169 - 4835464 AATGTTGGAATG-TGTCCTCGATATTCTA-----TAACTTTTTTATACCTTAA---TTTCA-AT--GAGTGCCATTAAATAATCCAGttttctttttttttttttttttAA---GTATCCTGCAAACACA-AA--AGGTTGTC-AATCAAAGTTTTAAATTGAAGGCCTGTCGCCATTTCCCAACAGG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740678 159 + 4093027 AGTGTGGGAATG-TGTCCTCAATATTCTA-----TAACTTTTTTATGCTTTAA---TTTCA-ACAAGAGTGCCATTAAATAATCCAG------------TTTTTTTTTTAA---GTATCCTGAAAACACA-AA--AGGTTGAC-AATCAAAGTTTTAAATTGAAGTCCTGTAGCCATTTCCCAACAAG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077779 157 + 30473821 AGTTTGAAAATATTTTTTTCAATACTCGG-----TACCATTTTTTAAATGTAA---TTCCA-TCAAGAGTACTGTGGAATAATCCAG---------------TTTTTAAAC---GAATGCTGCAAACACA-AG--AGTTCGAT-CACCAGAGTTTTAAATTGAAGGTCTGTAGATGTTTCCCGTCACA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16611938 166 + 58134056 ATTGCCAAAGTA-GTTTTTAAATATTCAGAAACTTAATTTATTTTTACTTTAGTTCTTCCT-TCAAGAGTGCCATCAAATTATCCAG---------------TTTTTTTAAACTGTATTGATTATACA-A-GA--AGGTTGAC-AACCAAGGTTTTAAATTGAGGGTCTGTGATCATTTCCCAACACA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1867656 158 - 2187301 ACCATGGATATAATTTTTTCAGTATTATG-----AAAC--TTTAATTTTTTAACT-TTCCATTCAAGGGTCACATCTAATAATTCAG----------------TTTTAAAA---ATATATTGTAATCACAGGA--AGGTTGAC-AACCAAGGTTTGAAATTCAAGCTATCTAATCATTTCCAAATACA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628167 155 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59567986 293 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=454562.000000 s hg38.chrUn_KI270749v1 123257 37 + 158759 ------TGAAGTTGCCATTGCTACTT----ATCAGGGCAATAAAGTC s panTro5.chr3 202010491 37 - 202621043 ------TGAAGTTGCCATTGCTACGT----ATCAGGGCAATAAAGTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778515 37 - 205426864 ------TGAAGTTGCCATTGCTACGT----ATCAGGGCAATAAAGTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8501 37 - 17846 ------TGAAGTTGCCATTGCTACTT----ATCAGGGCAATAAAGTC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595237 37 + 86207423 ------TGAAGTTGCCATTGCTACAC----ATCAGGGCAATAAAGTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076476 37 + 204787373 ------CGAAGTTGCCATTGCTACAT----ATTAGGGCAATAAAGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008324 37 - 192460366 ------CGAAGTTGCCATTGCTACAT----ATTAGGGCAATAAAGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120567 37 - 17224310 ------CGAAGTTGCCATTGCTACAT----ATCAGGGCAATAAAGTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432464 37 - 41321030 ------CGAAGTTGCCATTGCTACAT----ATCAGGGCAATAAAGTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504033 37 - 101219884 ------GGAAGTTGCCATTGCTATAT----ATCAGGGCAATAAAGTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889874 37 - 924385 ------CGAAGTTGCCATTGCTACAT----ATCAGGGCAATAAAGTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730879 37 - 10587913 ------GGAAGTTGCCATTGCTACAT----ATCAGGGCAATAAAGTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065777 37 - 98464013 ------TGAAGTTGCCATTAATATGT----ATCAGGGCAATAAAGTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27742067 37 + 27742158 ------TGAAGTTGCCATTAATATGT----ATCAGGGCAATAAAGTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274908 37 - 4835464 ------TGAAGTTGCCATTAGTATGT----ATCAGGGCAATAAAGTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740837 41 + 4093027 ------TGAAGTTGCCATTAATGTGTATCAATCAGGGCAATAAAGTC i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 628322 37 + 2414909 ------TGAAATTGCCATTGCTACGT----ATCAGATCAATAAGGTC i proCoq1.NW_012148064v1 I 155 C 0 s otoGar3.GL873534 11077936 33 + 30473821 ------TGAAATTGCCTTTGGCACAA----ATCGGGTC----AGGTC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612104 36 + 58134056 ------TATTATGGCCACTGCTACAT----AT-AGGGCCAGTAAGTC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1867814 43 - 2187301 AGATATTTTTATTGCTAGTGCCAAAT----ATCTGGTCAATAAAGTC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59567986 293 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=233353.000000 s hg38.chrUn_KI270749v1 123294 18 + 158759 AATGACTGATATATTTTT s panTro5.chr3 202010528 18 - 202621043 AATGACTGATATATTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778552 18 - 205426864 AATGACTGATATATTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8538 18 - 17846 AATGACTGATATATTTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595274 18 + 86207423 AATGACTGATATATTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076513 18 + 204787373 AATGACTGATATATATTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008361 18 - 192460366 AATGACTGATATATATTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120604 18 - 17224310 AATGACTGATATATATTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432501 18 - 41321030 AATGACTGATATATATTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504070 18 - 101219884 AACGACTGATATATATTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889911 18 - 924385 AATGACTGATATATATTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730916 18 - 10587913 AATGACTGATATATATTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065814 18 - 98464013 AATGACTGATATATTTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27742104 18 + 27742158 AATGACTGATATATTTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274945 18 - 4835464 AATGACTGATATATTTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740878 18 + 4093027 AGTGACTGATATATTTTT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 628359 18 + 2414909 CATGACTGATATTTTTTT i proCoq1.NW_012148064v1 C 0 I 74 s otoGar3.GL873534 11077969 18 + 30473821 CATGACTGAGATTTTTTC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612140 18 + 58134056 AATGACTGACATCTTTGT i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59567986 293 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e dasNov3.JH563077 1867857 0 - 2187301 C a score=4556.000000 s hg38.chrUn_KI270749v1 123312 1 + 158759 -T s panTro5.chr3 202010546 1 - 202621043 -T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778570 1 - 205426864 -T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8556 1 - 17846 -T i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595292 1 + 86207423 -T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076531 1 + 204787373 -T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008379 1 - 192460366 -T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120622 1 - 17224310 -T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432519 1 - 41321030 -T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504088 1 - 101219884 -T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889929 1 - 924385 -T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730934 1 - 10587913 -T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065832 1 - 98464013 -T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27742122 1 + 27742158 -T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274963 1 - 4835464 -T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740896 1 + 4093027 -T i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077987 1 + 30473821 -T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612158 1 + 58134056 A- i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59567986 293 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e dasNov3.JH563077 1867857 0 - 2187301 C a score=23880.000000 s hg38.chrUn_KI270749v1 123313 2 + 158759 CA s panTro5.chr3 202010547 2 - 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778571 2 - 205426864 CA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8557 2 - 17846 CA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595293 2 + 86207423 CA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076532 2 + 204787373 CA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008380 2 - 192460366 CA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120623 2 - 17224310 CA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432520 2 - 41321030 CA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504089 2 - 101219884 CA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889930 2 - 924385 CA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730935 2 - 10587913 CA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065833 2 - 98464013 CA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27742123 2 + 27742158 CA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274964 2 - 4835464 CA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740897 2 + 4093027 CA i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16612159 2 + 58134056 TA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1388418 1568 - 1467263 I e papAnu3.chr2 59567986 293 + 187378091 I e nasLar1.chr2 57737887 1568 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e dasNov3.JH563077 1867857 0 - 2187301 C a score=17100.000000 s hg38.chrUn_KI270749v1 123315 1 + 158759 G s panTro5.chr3 202010549 1 - 202621043 G i panTro5.chr3 C 0 I 2 s panPan2.chr3 204778573 1 - 205426864 G i panPan2.chr3 C 0 I 2 s gorGor5.CYUI01007532v1 8559 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595295 1 + 86207423 G i nomLeu3.chr21 C 0 I 2 s rheMac8.chr2 66076534 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008382 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120625 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432522 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504091 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889932 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57739455 1 + 181502896 G i nasLar1.chr2 I 1568 I 837 s colAng1.NW_012114711v1 6730937 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1389986 1 - 1467263 G i rhiRox1.KN296641v1 I 1568 I 837 s calJac3.chr15 46065835 1 - 98464013 G i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27742125 1 + 27742158 G i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 274966 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3740899 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 I 1 s canFam3.chr20 16612161 1 + 58134056 G i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e papAnu3.chr2 59567986 293 + 187378091 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e dasNov3.JH563077 1867857 0 - 2187301 C a score=25035.000000 s hg38.chrUn_KI270749v1 123316 5 + 158759 TTTTT s panTro5.chr3 202010552 5 - 202621043 TTTTT i panTro5.chr3 I 2 C 0 s panPan2.chr3 204778576 5 - 205426864 TTTTT i panPan2.chr3 I 2 C 0 s gorGor5.CYUI01007532v1 8560 5 - 17846 TTTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595298 4 + 86207423 TTTT- i nomLeu3.chr21 I 2 I 1 s rheMac8.chr2 66076535 5 + 204787373 TTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008383 5 - 192460366 TTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120626 5 - 17224310 TTTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432523 5 - 41321030 TTTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504092 5 - 101219884 TTTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889933 5 - 924385 TTTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730938 5 - 10587913 TTTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065837 4 - 98464013 TTTT- i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27742127 4 + 27742158 TTTT- i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 274968 4 - 4835464 TTTT- i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3740901 4 + 4093027 TTTT- i aotNan1.NW_018502033v1 I 1 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59567986 293 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69666164 1567 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e canFam3.chr20 16612162 0 + 58134056 C e dasNov3.JH563077 1867857 0 - 2187301 C a score=5270.000000 s hg38.chrUn_KI270749v1 123321 2 + 158759 TA s panTro5.chr3 202010557 2 - 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778581 2 - 205426864 TA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8565 2 - 17846 TA i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69667731 2 + 202140232 ta i ponAbe2.chr3 I 1567 I 813 s nomLeu3.chr21 67595303 1 + 86207423 T- i nomLeu3.chr21 I 1 C 0 s rheMac8.chr2 66076540 2 + 204787373 TA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008388 2 - 192460366 AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120631 2 - 17224310 TA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432528 2 - 41321030 TA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504097 2 - 101219884 AA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889938 2 - 924385 TA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730943 2 - 10587913 TA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065841 2 - 98464013 CA i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27742131 2 + 27742158 CA i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 274972 2 - 4835464 CA i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3740905 2 + 4093027 CA i aotNan1.NW_018502033v1 C 0 I 1 s canFam3.chr20 16612162 1 + 58134056 -A i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59567986 293 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e dasNov3.JH563077 1867857 0 - 2187301 C a score=3560.000000 s hg38.chrUn_KI270749v1 123323 1 + 158759 -A s panTro5.chr3 202010559 1 - 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778583 1 - 205426864 -A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8567 1 - 17846 -A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595304 1 + 86207423 -A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076542 1 + 204787373 -A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008390 1 - 192460366 -A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120633 1 - 17224310 -A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432530 1 - 41321030 -A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504099 1 - 101219884 -A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889940 1 - 924385 -A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730945 1 - 10587913 -A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065844 1 - 98464013 -A i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27742134 1 + 27742158 -A i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 274975 1 - 4835464 -A i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3740908 1 + 4093027 -A i aotNan1.NW_018502033v1 I 1 C 0 s canFam3.chr20 16612163 1 + 58134056 C- i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59567986 293 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1242688 1577 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e dasNov3.JH563077 1867857 0 - 2187301 C a score=15561.000000 s hg38.chrUn_KI270749v1 123324 1 + 158759 A s panTro5.chr3 202010560 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778584 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8568 1 - 17846 A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595305 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076543 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008391 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120634 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432531 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59568279 1 + 187378091 A i papAnu3.chr2 I 293 I 806 s chlSab2.chr22 64504100 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889941 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730946 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1244265 1 - 2311269 A i rhiBie1.NW_016820128v1 I 1577 I 828 s calJac3.chr15 46065845 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27742135 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274976 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740909 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16612164 1 + 58134056 A i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e dasNov3.JH563077 1867857 0 - 2187301 C a score=164377.000000 s hg38.chrUn_KI270749v1 123325 19 + 158759 TTTATTTTTTAATTAAATT s panTro5.chr3 202010561 19 - 202621043 TTTATTTTTAAATTAAATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778585 19 - 205426864 TTTATTTTTTAATTAAATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8569 19 - 17846 TTTATTTTTTAATTAAATT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595306 19 + 86207423 TTTATTTTTAAATTAAAtt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076544 19 + 204787373 TTTATTTTTAAATTAAAtt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008392 19 - 192460366 TTTATTTTTAAATTAAAtt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120635 19 - 17224310 TTTATTTTTAAATTAAAtt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432532 19 - 41321030 TTTATTTTTAAATTAAAtt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504101 19 - 101219884 TTTATTTTTTAATTAAAtt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889942 19 - 924385 TTTATTTTTAAATTAAAtt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730947 18 - 10587913 TTTATTTTT-AATTAAAtt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065846 19 - 98464013 TTTATTTTTTAAATAAGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27742136 19 + 27742158 tttatttatttatttattt i saiBol1.JH378125 C 0 N 0 s cebCap1.NW_016107467v1 274977 19 - 4835464 TTTATTTTTTAAATAAGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740910 19 + 4093027 TTTATTTTTTAAATAAATT i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16612165 19 + 58134056 ACTACCTAACAATTCCATT i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e dasNov3.JH563077 1867857 0 - 2187301 C a score=953207.000000 s hg38.chrUn_KI270749v1 123344 114 + 158759 -----------------TTAGTGtttattttagatatggggggataca----tgtgcaggtttgttacat--aggtatattgc----atagtcctgagtttggg------------------------------------------ggtatggatcctgtcatccagggagttagcataggat s panTro5.chr3 202010580 114 - 202621043 -----------------TTAGTGtttattttagatatggggggataca----ggtgcaggtttgttacat--aggtatattgc----ataatcctgagtctggg------------------------------------------ggtatggatcctgtcatccaggtagttagcataggat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778604 114 - 205426864 -----------------TTAGTGtttattttagatatggggggataca----ggtgcaggtttgttacat--aggtatattgc----ataatcctgagtctggg------------------------------------------ggtatggatcctgtcatccaggtagttaacataggat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8588 114 - 17846 -----------------TTAGTGtttattttagatatggggggataca----tgtgcaggtttgttacat--aggtatattgc----ataattctgagtttggg------------------------------------------ggtatggatcctgtcatccaggtagttagcataggat i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595325 114 + 86207423 -----------------ttagcatttattttagatatggggggataaa----tgtgcaggtttgttacgt--aggtatattgc----ataatcctgagtttggg------------------------------------------ggtatggatcctgtcatccaggtagttagcataggat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076563 113 + 204787373 -----------------ttagcttttattttagatat-gggggatgca----tgtgaaggtttgttacat--aggtatattgt----gtaatgctgaatttggg------------------------------------------ggtatggatcctgtcatccaggaagttagcataggac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008411 113 - 192460366 -----------------ttagcttttattttagatat-gggggatgca----tgtgaaggtttgttacat--aggtatattgt----gtaatgctgaatttggg------------------------------------------ggtatggatcctgtcatccaggaagttagcataggac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120654 113 - 17224310 -----------------ttagcttttattttagatat-gggggatgca----tgtgaaggtttgttacat--aggtatattgt----gtaatgctgaatttggg------------------------------------------ggtatggatcctgtcatccaggaagttagcataggac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432551 113 - 41321030 -----------------ttagcttttattttagatat-gggggataca----tgtgaaggtttgttacat--aggtttattgt----gtaatgctgaatttggg------------------------------------------ggtatggatcctgtcatccaggaagttagcataggac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504120 114 - 101219884 -----------------ttagcttttattttagatacggggggataca----tgtgaaggttttttacat--aggtatattgt----ataatgctgaatttggg------------------------------------------ggtatggatcctgtcatccaggaagttagcataggac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889961 113 - 924385 -----------------ttagcttttattttagatat-gggggataca----tgtgaaggtttgttacat--aggtatattgt----gtaatgctgaatttggg------------------------------------------ggtatggatcctgtcatccaggaagttagcataggac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730965 113 - 10587913 -----------------ttagcttttattttagatat-gggggataca----tgtgaaggtttgttacat--aggtatattgt----gtaatgttgagtttggg------------------------------------------gatatggatcctgtcatccaggaagttagcataggac i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065865 110 - 98464013 -----------------TTAGCTCTTG----AGATATGGgaggatacc----tgtgcaggactgttacat--agatacatggc----ataatgctgagttttca------------------------------------------ggtatggatcctgtcatccagatagttagcataggac i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2550585 110 - 2763108 -----------------TTCGCTCTTG----AGATAGGGgaggataca----tgtgcaggactgttacat--agatatatggc----atattgctttgttttca------------------------------------------ggtatggatcctgtcatccagacagttagcacaggac i saiBol1.JH378290 N 0 C 0 s cebCap1.NW_016107467v1 274996 110 - 4835464 -----------------TTAGCTCTTG----AGATATGGgaggataca----tgtgcaggactgttacat--agatatatggc----acaatgctgagttttcg------------------------------------------ggtatggatcctgtcatccagacagttagcataggac i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740929 110 + 4093027 -----------------TTAGCTCTTG----AGATATGGgaggataca----tgtgcaggactgttacat--agatacatggc----ataatgctgagttttcg------------------------------------------ggtatggatcctgtcatccagatagttagcataggac i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16612184 176 + 58134056 TTGACTGTCCTCACTGTGTAGCTTCTTCTCTGGAT-------GATACAGTGCTGTGCCAATTTTTTAAACTGTGttttattgtagcaagaacactgaacatgggctctaacctcttaaatttttaaaaatgtacattactgttgaccataggtactgtgtcatacagtggatttatagagcgt i canFam3.chr20 C 0 I 41 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e dasNov3.JH563077 1867857 0 - 2187301 C a score=251402.000000 s hg38.chrUn_KI270749v1 123458 27 + 158759 ccaataggtagtttttcaacccttccc s panTro5.chr3 202010694 27 - 202621043 ccaataggtagtttttcaacccttccc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778718 27 - 205426864 ccaataggtagtttttcaacccttccc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8702 26 - 17846 ccaataggtag-ttttcaacccttccc i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595439 27 + 86207423 ccaataggtagtttttcaacccttccc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076676 27 + 204787373 caaataggtagtttttcaacctttcct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008524 27 - 192460366 caaataggtagtttttcaacctttccc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120767 27 - 17224310 caaataggtagtttttcaacctttccc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432664 27 - 41321030 catataggtagtttttcaacctttccc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504234 27 - 101219884 caaataggtagtttttcaacctttccc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890074 27 - 924385 caaataggtagtttttcaacctttccc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731078 27 - 10587913 caaataggtagtttttcaacctgtccc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065975 27 - 98464013 ctcataggtagtttttcaacccttccc i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2550695 27 - 2763108 ttcacaggtagtttttcaacccttccc i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275106 27 - 4835464 ctcacaggtagtttttcaacccttccc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741039 27 + 4093027 ctcacaggtagtttttcaacccttccc i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e canFam3.chr20 16612360 41 + 58134056 I e dasNov3.JH563077 1867857 0 - 2187301 C a score=3063530.000000 s hg38.chrUn_KI270749v1 123485 322 + 158759 cacctctctctcgcctctctta----------------gtccccggtgtctattgcttccatctacatgtccatgtaaactcaatgtccagctcttattcattagtgagaacatgtggtatttgattttctgtttctgcattaattcac-----ttaggattatggacttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgactgcatagtgttccttggtacctgtatgtaccacattttctttatccaatccaccactaatggatacctaggttgagttcatgtctttgttattgtgaatagcacagcaaagaaaatataagt s panTro5.chr3 202010721 322 - 202621043 caccgctctctcccctctttta----------------gtccccggtgtctactgcttccatctacatgtccatgtaaactcaatgtccagctcttattcattagtgagaacatgtggtatttgattttctgtttctgcattaattcac-----ttacgattatggacttcagcttaatccatgttgcttaaaaggacataatttgattctttatgatgactgcatagtgttccttggtacctgtatgtaccacattttctttatccaatccaccactaatggatacctaggttgagttcgtgtctttgttatcgtgaatagcacagcaaagaaaatataagt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778745 322 - 205426864 caccgctctctcccctctttta----------------gtccccggtgtctactgcttccatctacatgtccatgtaaactcaatgtccagctcttattcattagtgagaacatgtggtatttgattttctgtttctgcattaattcac-----ttacgattatggacttcagcttaatccatgttgcttaaaaggacataatttgattctttatgatgactgcatagtgttccttggtacctgtatgtaccacattttctttatccaatccaccactaatggatacctaggttgagttcgtgtctttgttatcgtgaatagcacagcaaagaaaatataagt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8728 319 - 17846 cacctctctctcccctctttta----------------gtccccagtgtctattgcttccatctacatgt-catgtaaactcaatgaccagctcttattcattagt-agaacatgtggtatttgattttctgtttctgcattaattcac-----ttaggattatggacttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgactgcatagtgttccttggtacctgtatgtaccacattttctttatccaatccaccactaatggatacctaggttgagttcatgtctttg-tattgtgaatagcacagcaaagaaaatataagt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595466 322 + 86207423 cacctctctctcccctctttta----------------gtccccagtgtctattgcttccatctacatgtccatgtaaactcaatgtccagctcttactcattagtgagaacatgtggtatttggttttctgtttctgcattaattcac-----ttaggattatggccttcagcttaatccatgttgcttaaaaggacagaatttgattctttattacaactgcatagtgttccctggtacctatatgtaccacattttctttatctaatccaccaataatggatacctaggttgagttcatgtctttgttatcgtgaatagcacagcaaagaacatatgagt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076703 317 + 204787373 cacttctctctcctctctttta----------------gtccccggtgtctattgcttccatctacatgtccatgtatactcaatgttcagctcttactcattagtgagaacattttgtatttgattttctgtttctgcattaattcac-----ttaggattatggccttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgatatcatgtatagcacaccaaagaacacatgagt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008551 317 - 192460366 cacttctctctcctctctttta----------------gtccccggtgtctattgcttccatctacatgtccatgtatactcaatgttcagctcttactcattagtgagaacattttgtatttgattttctgtttctgcattaattcac-----ttaggattatggccttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgatatcatgtatagcacaccaaagaacacatgagt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120794 317 - 17224310 cacttctctctcctctctttta----------------gtccccggtgtctattgcttccatctacatgtccatgtatactcaatgttcagctcttactcattagtgagaacattttgtatttgattttgtgtttctgcattaattcac-----ttaggattatggccttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgatatcatgtatagcacaccaaagaacacatgagt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432691 317 - 41321030 cacttctctctcctctctttta----------------gtccccggtgtctattgcttccatctacatgtccatgtatactcaatgttcagctcttactcattagtgaaaacatttcgtatttgattttctgtttctgcattaattcac-----ttaggattatggccttcaacttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgctatcatgtatagcacaccaaagaacatatgagt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504261 317 - 101219884 cacttctctctcctctctttta----------------gtccccggtgtctattgcttctatctacatgtccacgtatactcaatgttcagctcttactcattagtgagaacatttcgtatttgattttctgtttctgcattaattcac-----ttgggattatggccttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggatgagttcatgtctttgctatcatgtatagcacagcaaagaacatatgagt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890101 317 - 924385 cacttctctctcctctctttta----------------gtccccggtgtctattgcttccatctacatgtccatgtatactcaatgttcagctcttactcattagtgaaaacatttcgtatttgattttctgtttctgcattaattcac-----ttaggattatggccttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgctatcatgtatagcacaccaaagaacatatgagt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731105 338 - 10587913 tacttctctctcctctcttttattgcttccatctacatgtctacagtgtctattgcttccatctacatgtccacgtatactcaatgttcagctcttactcattagtgagaacattttgtatttgattttctgtttctgcattaattcac-----ttaggattatgtccttcagcttaatccatgtttcttaaaaggacataatttgattctttattatgactacatagtgttctttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgctatcatgtgtagcacagcaaagaacatatgagt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066002 317 - 98464013 cgcttctctccc-cgtc--tta----------------gtccccagtgtctgttgtttccatctacatgtccatgtatactcaatgattagctcttactcactaatgaaaacgtg--gtatttggttttctgttcctgcattaaatcac-----ttaggattatggcctccaccttaatccatgctgttccaaaggacataatttccttctttattatgactgtgtagtgttccttggtacctatgtgtaccacattttctttactgaatccaccactgatggacacctaggttgatttcatgtctttgttatcatgaataacacagcaaagaacatacgagt i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2550722 318 - 2763108 cacttctctcccgcctc--tta----------------gtccccagtgtctgttgtttccatctacatgtccatgtatactcaatgttcggctcttactcactaacaaaaacatg--gtatttggttttctgttcctgcattaattcat-----ttaggattatggcctccagcttaatccatgctgttccaaaggacataatttcattctttattatgactgtgtagtgttccttggtacccatatgtaccacattttctttatcgaatccaccactgatggacacctaagttgatttcatgtctttgttattgtgaataacacagcaaagaacatacgagt i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275133 318 - 4835464 cacttctctcccccttc--tta----------------gtccacagtgtctgttgtttccatctacatgcccatgtatactcaatgttcagctcttgctcactaatgaacacgtg--gtatttggttttctgttcctgcattaattcac-----ttaggattatggcctccagcttaatccatgctgtttcaaaggacataatttcattctttattatgactgtgtagtgttccttggtacctatgtgtaccacattttctttatcaaatccaccactgatggacacctaggttgatttcatgtctttgttatcgtgaataacacagcaaagaacatatgagt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741066 318 + 4093027 cacttctctccctcctc--tta----------------gtccccagtgtctgttgtttccatctacatgtctatgtatactcaatgttcagctcttactcactaatgaaaatgtg--gtatttggttttctgttcctgcattaattcac-----ttaggattatggcctccagcttaatccatgctgttccaaagggcataatttcattctttattatgactgtgtagtgttccttggtacctatgtgtaccacattttctttatcgaatccaccactgatggacacctaggttgatttcatatctttgtaatcgtgaataacacagcaaagaacatacgagt i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16612401 295 + 58134056 ctcctcattctctctcccccca----------------gtccttggtaaccaccattctgctctttgattcaatgaatgtgatgatttcagatacctcatacaagtggaatcatgcagtatttggctttctgaaatggc-ttatttcacattcattaacataacatcctccagtctcattcatgttgtcacatattgcagaatt-----------------------gtattccgttgtatgtatatgt--ctaattttctttatgcattgatc------tggaacattttgttgttcccacatcttggctattgtgaatagtgctgcaaagaacatgggaat i canFam3.chr20 I 41 T 554 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e dasNov3.JH563077 1867857 0 - 2187301 C a score=59668.000000 s hg38.chrUn_KI270749v1 123807 7 + 158759 gcgtgtA s panTro5.chr3 202011043 7 - 202621043 gcgtgCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779067 7 - 205426864 gcgtgCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9047 7 - 17846 gcgtgCA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595788 7 + 86207423 gcatgtA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077020 7 + 204787373 gcatgtA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008868 7 - 192460366 gcatgtA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121111 7 - 17224310 gcatgtA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433008 7 - 41321030 gcatgtA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504578 7 - 101219884 gcatgtA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890418 7 - 924385 gcatgtA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731443 7 - 10587913 gcatgtA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066319 7 - 98464013 acatgtg i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551040 7 - 2763108 gcatgtg i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275451 7 - 4835464 gcatgtg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741384 7 + 4093027 acatgCA i aotNan1.NW_018502033v1 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e canFam3.chr20 16612696 554 + 58134056 T e dasNov3.JH563077 1867857 0 - 2187301 C a score=18952.000000 s hg38.chrUn_KI270749v1 123814 2 + 158759 CT s panTro5.chr3 202011050 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779074 2 - 205426864 CT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9054 2 - 17846 CT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595795 2 + 86207423 CT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077027 2 + 204787373 CT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008875 2 - 192460366 CT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121118 2 - 17224310 CT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433015 2 - 41321030 CT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504585 2 - 101219884 CT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890425 2 - 924385 CT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731450 2 - 10587913 CT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066326 2 - 98464013 CT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551047 2 - 2763108 ct i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275458 2 - 4835464 ct i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741391 2 + 4093027 GT i aotNan1.NW_018502033v1 C 0 C 0 s dasNov3.JH563077 1867857 2 - 2187301 CA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C e canFam3.chr20 16612696 554 + 58134056 T a score=205737.000000 s hg38.chrUn_KI270749v1 123816 18 + 158759 TAACTGATGTATTTGTAC s panTro5.chr3 202011052 18 - 202621043 TAACTGATGTATTTGTAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779076 18 - 205426864 TAACTGATGTATTTGTAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9056 18 - 17846 TAACTGATGTATTTGTAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595797 18 + 86207423 TAACTGATGTATTTATAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077029 18 + 204787373 TAACTGATGTATTTGTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008877 18 - 192460366 TAACTGATGTATTTGTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121120 18 - 17224310 TAACTGATGTATTTGTAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433017 18 - 41321030 TAACTGATGTATTTGTAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504587 18 - 101219884 TAACTGATGTATTTGTAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890427 18 - 924385 TAACTGATGTATTTGTAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731452 18 - 10587913 TAACTGATGCATTTGTAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066328 18 - 98464013 TAACCGATATACTTGCAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551049 18 - 2763108 taactgatatacttgtat i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275460 18 - 4835464 taactgatatacttgtat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741393 18 + 4093027 TAACTGATATACTTGTAT i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16612142 18 + 58134056 TGACTGACATCTTTGTAT i canFam3.chr20 T 554 C 0 s dasNov3.JH563077 1867859 18 - 2187301 TAAATAATATTTTTATAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I e otoGar3.GL873534 11077988 0 + 30473821 C a score=718526.000000 s hg38.chrUn_KI270749v1 123834 71 + 158759 AGACCACCTCTTAACAACTCCATTTTGACTGGCCTTTTTGTATGTCGTCTGCTCTG-ATGAAACAGC-----------GTCAA s panTro5.chr3 202011070 71 - 202621043 AGACCACCTCTTAACAACTCCATTTTGACTGGCCTTTTTGTATGTCGTCTGCCCTG-ATGAAACAGC-----------GTCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779094 71 - 205426864 AGACCACCTCTTAACAACTCCATTTTGACTGGCCTTTTTGTATGTCGTCTGCCCTG-ATGAAACAGC-----------GTCAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9074 71 - 17846 AGACCACCTCTTAACAACTCCATTTTGACTGGCCTTTTTGTATGTCGTCTGCTCTG-ATGAAACAGC-----------GTCAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595815 71 + 86207423 AGACCACCTCTTAACAACTCCATTTTGACTGGCCTTTTTATATATCATCTGCTCTG-ATGATTCAGT-----------GTCAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077047 71 + 204787373 AGACAACCTCTTAACAACTCCATTTTGACTGGCCTTCCCATATATCATCTGCTCTA-ATGATGCAGT-----------GTCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008895 71 - 192460366 AGACAACCTCTTAACAACTCCATTTTGACTGGCCTTCCCATATATCATCTGCTCTA-ATGATGCAGT-----------GTCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121138 71 - 17224310 AGACAACCTCTTAACAACTCCATTTTGACTGGCCTTCCCATATATCATCTGCTCTA-ATGATGCAGT-----------GTCAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433035 71 - 41321030 AGACAACCTCTTAACAACTCCATGTTGACTGGCCTTTCTATATATCATCTGCTCTA-ATGATGCAGT-----------GTCAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504605 71 - 101219884 AGACAACCTCTTAACAACCCCATTTTGACCGGCCTTTCTATATATCATCTGCTCTA-ATGATGCAGT-----------GTCAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890445 71 - 924385 AGACAACCTCTTAACAACTCCATGTTGACTGGCCTTTCTATATATCATCTGCTCTA-ATGATGCAGT-----------GTCAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731470 71 - 10587913 AGACAACTTCTTAACAACTCCATTTTGACCGGCCTTTCTATATATCATCTGCTCTA-ACGATGCAGT-----------GTCAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066346 82 - 98464013 AGACTAATTCTTAACTACTCCATTTTGACTGGCCTTTCAATACATCTTCTGCTCCA-ATGATACAGTGTTGATAGAGGGTCAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551067 71 - 2763108 agactacttcttAACTACTCCATTTTGACTGGCCTTTCTATATATCTTCTGCTCCA-ATGTTACAGT-----------GTCAT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275478 71 - 4835464 agactacttcttAACTACTCCATTTTGACTGGCCTTTCTATATATCTTCTGCTCCA-ATGATACAGT-----------GTCAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741411 69 + 4093027 AGACTACTTCTTAACTACTCCATTTTGACTGGCCTTTCTATGTAACTTCTGCTCCA-ATGAT--AGT-----------GTCAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077988 70 + 30473821 AGAC-GCTACTGCATGACTCCATGTGGA-TGGGCTTTGTCTGTACCTTCTGCTCTGCGTGATACAGT-----------GTCAG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612160 72 + 58134056 AGACAACTACCTAACAATTCCATTTTGACTGTCCTCACTGTGTAGCTTCTTCTCTGGATGATACAGT-----------GCTGT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1867877 63 - 2187301 AGACCACTGTTTGATGTGTACATTTTGATCAGCCTCTC----TACCTTTTGCCATG---GATAGAGT-----------AAT-- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628377 74 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=73449.000000 s hg38.chrUn_KI270749v1 123905 5 + 158759 GACAA s panTro5.chr3 202011141 5 - 202621043 GACAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779165 5 - 205426864 GACAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9145 5 - 17846 GACAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595886 5 + 86207423 GACAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077118 5 + 204787373 GACAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008966 5 - 192460366 GACAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121209 5 - 17224310 GACAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433106 5 - 41321030 GACAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504676 5 - 101219884 GACAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890516 5 - 924385 GACAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731541 5 - 10587913 GACAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066428 5 - 98464013 GGCAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551138 5 - 2763108 GACAG i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275549 5 - 4835464 GACAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741480 5 + 4093027 GACAT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 628451 5 + 2414909 GACAA i proCoq1.NW_012148064v1 I 74 C 0 s otoGar3.GL873534 11078058 5 + 30473821 GACAA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612232 5 + 58134056 GCCAA i canFam3.chr20 C 0 I 552 s dasNov3.JH563077 1867940 5 - 2187301 TACAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=536541.000000 s hg38.chrUn_KI270749v1 123910 44 + 158759 TTT----AAGAGTATCTTTGCACAAGTTCTTCCCTTCTGAAACACTCT s panTro5.chr3 202011146 44 - 202621043 TTT----AAGAGTATCTTTGCACAAGTTCTTCCCTTCTGAAACACTCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779170 44 - 205426864 TTT----AAGAGTATCTTTGCACAAGTTCTTCCCTTCTGAAACACTCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9150 44 - 17846 TTT----AAGAGTATCTTTGCACAAGTTCTTCCCTTCTGAAACACTCT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595891 44 + 86207423 TTT----AAGAGTACCTTTGCACAAGTTCTTCCCTTCTGAAACACTCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077123 44 + 204787373 TTT----AAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAATACTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008971 44 - 192460366 TTT----AAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAATACTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121214 44 - 17224310 TTT----AAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAATACTCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433111 44 - 41321030 TTT----AAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAATACTCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504681 44 - 101219884 TTT----AAGAGTACATTTGCACAAAGTCTTCCCTTCTGAAACACTCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890521 44 - 924385 TTT----AAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAATACTCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731546 44 - 10587913 TTT----AAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAACACTCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066433 44 - 98464013 TTT----AAGGGCACCTTAGTACAAGTTTTTCCCTTTTGAAACACTCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551143 44 - 2763108 TTT----AAGAGTACCTTAGCACAAGCTTTTCCCTTTTGAAACACTCT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275554 44 - 4835464 TTT----AAGagtaccttagcacatgcttttcccttttgaaacgctct i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741485 41 + 4093027 TT-------GAGTACCTTAGCACAAGCTTTTCCATTTTGAAACACTCT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 628456 44 + 2414909 GTT----GAGAGTACCTTTGTACAAATTTTTCCCTTCTGGACTACTCT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11078063 47 + 30473821 GGTACTAAACAGTACC-TCGGGTACAGTTTCCCCTTCTGGACTACTTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612789 42 + 58134056 ttt----aaggGCA--TGTGCACAAGTTCTTCTGTTTTGGAACACTCT i canFam3.chr20 I 552 C 0 s dasNov3.JH563077 1867945 43 - 2187301 TTT----AAGAATTcctttgcacaa-ttcttcctttgtggaatattct i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1628965 546 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=756140.000000 s hg38.chrUn_KI270749v1 123954 50 + 158759 TCTCTCT-----TTACTTTTTTGCCCTTTGGATCTCAATTGAGCCAAGCCCTCCT s panTro5.chr3 202011190 50 - 202621043 TCTCTCT-----TTACTTTTTTGCCCTTTGGATCTCAATTGAGCCAAGCCCTCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779214 50 - 205426864 TCTCTCT-----TTACTTTTTTGCCCTTTGGATCTCAATTGAGCCAAGCCCTCCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9194 50 - 17846 TCTCTCT-----TTACTTTTTTGCCCTCTGGATCTCAATTGAGCCAAGCCCTCCT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595935 50 + 86207423 TCTCTCT-----TTATTTTTTTGCCCTTTGGATCTCAATTGAGTCAAGCCCTCCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077167 50 + 204787373 TCTCTCT-----TTACTTTTTTGTCCTTTGGATCTCAATTGAATCAAGCCCTCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009015 50 - 192460366 TCTCTCT-----TTACTTTTTTGTCCTTTGTATCTCAATTGAATCAAGCCCTCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121258 48 - 17224310 TCTCTCT-----TTACTTTTT--TCCTTTGGATCTCAATTGAATCAAGCCCTCCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433155 50 - 41321030 TCTCTCT-----TTACTGTTTTGTCCTTTGGATCTCAATTGAATCAAGCCCTCCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504725 50 - 101219884 TCTCTCT-----TTACTTTTTTGTCCTTTGGATCTCAATTGAATCAAGCCCTCCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890565 50 - 924385 TCTCTCT-----TTACTTTTTTGTCCTTTGGATCTCAATTGAATCAAGCCCTCCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731590 50 - 10587913 TCTCTCT-----TTACTTTTTTGTCCTTTGGATCTCAATTGAATCAAGCCCTCCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066477 50 - 98464013 TCTCTCT-----TTACTTTTTTGTCCTTTGGATCTCAACTGTGTCAGGCCCTCCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551187 50 - 2763108 TCTCTCT-----TGACTTATTTGTCCTTCGGATCTCAACTGAGTCAGACCCTCCT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275598 48 - 4835464 tgtctct-------acttttttgTACTTTGGATCTCAACTGAGTCAGGCCCTCCT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741526 48 + 4093027 TCTCTCT-------ACTTTTTTGTCCTTTGGATCTCAACTGAGTCAGGCCCTCCT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1629511 50 - 9149476 TCTCTCT-----TCACTTTTTTGTCCTTTGAATCTCAACTGATTCAAGCCCTCCT i micMur3.chr32 I 546 I 258 s proCoq1.NW_012148064v1 628500 50 + 2414909 TCTCTCT-----TCACTTTTTTGTCCTTTGAATCTCAACTGATTCAAGCCCTCCT i proCoq1.NW_012148064v1 C 0 I 120 s otoGar3.GL873534 11078110 49 + 30473821 TCTCTCT-----TCAC-TTTTTGTCCTTTGGATCTCAACTGATTCAAACCCTTCC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612831 50 + 58134056 TTTCCCT-----TCATCTTTTCATCCTTTGGATCTCAATTTAGTTAAGGCCTCCT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1867988 54 - 2187301 -ctacctaactaatacctttttatcctttggatttcagctcagtcaagcctcctT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=1273935.000000 s hg38.chrUn_KI270749v1 124004 123 + 158759 ATTGCACATCTCCTTGTC--ATTTTTTAA--TTATACTTTctctgtgacc-agactacatagactaagaatcca---ctctcaccacttaattaca-tgtgaacatgaacagactcatctagcctgactttg s panTro5.chr3 202011240 123 - 202621043 ATTGCACATCTCCTTGTC--ATTTTTTAA--TTATACTTTctctgtgacc-acactacatggactaaaaatcca---ctcccaccacttaattaca-tgtgaacatgaacagactcatctagcctgactttg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779264 123 - 205426864 ATTGCACATCTCCTTGTC--ATTTTTTAA--TTATACTTTctctgtgacc-acactacatggactaaaaatcca---ctcccaccacttaattaca-tgtgaacatgaacagactcatctagcctgactttg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9244 123 - 17846 ATTGCACATCTCCTTGTC--ATTTTTTAA--TTATACTTTctctgtgacc-agactacatagactaaaactcca---ctcccaccacttaattaca-tgtgaacatgaacagactcatctagcctgactttg i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595985 123 + 86207423 ATTGCACCTCTCCTTGTC--ATTTTTTAA--TTCTACCTTctctgtgacc-agactacatgggctaaaaatcca---ctcccaccacttaattaca-tgtgaacatgaacagactcacctagcctgactttg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077217 123 + 204787373 ATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacatggactaaaaatcca---ctcccatcacttaattacc-cgtgaagacgaacagattcatttagcctgattttg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009065 123 - 192460366 ATTGCACCTCTCCTTGCC--TTTTTTATA--TTATACCTTctctgtgacc-agactacatggactaaaaatcca---ctcccatcacttaattacc-cgtgaagacgaacagattcatttagcctgattttg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121306 123 - 17224310 ATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacatggactaaaaatcca---ctcccatcacttaattacc-cgtgaagacgaacagattcatttagcctgattttg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433205 123 - 41321030 ATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacatgaactaaaaatcca---ctcccatcacttaattacc-catgaagatgaacagattcatttagcctgattttg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504775 123 - 101219884 ATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacatggactaaaaatcca---ctcccatctcttaattacc-cgtgaagatgaacagattcatttagcctgattttg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890615 123 - 924385 ATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacatgaactaaaaatcca---ctcccatcacttaattacc-cgtgaagatgaacagattcatttagcctgattttg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731640 123 - 10587913 ATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacttggactaaaaatcca---ctcccatcacttaattacc-cgtgaagacgaacagattcatttagactgattttg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066527 126 - 98464013 ATTGCAGGTTTCCTTGTCA-TTTTGTTTA--TTATATCTTCTCTGTGTCCAAAAGTACATAGACTAAAAATTCA---CTCCCATTACTTAATTTAAgtgtgaacatgagcagattcatttagtcttactttg i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551237 127 - 2763108 ATTGCACATTTCCTTGTCA-TTTTTTTTAAGTTATATCTTctctgtgtcc-agagtacatggactaaaaattca---ctcccatttattaatttcaatgtgaacatgaacagaataatttagtctgactttg i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275646 125 - 4835464 ATTGAACGTTTCCTTGTCA-TTTTTTTTA--TTATATCTTctctgtgtcc-agagtacatggactaaaaattca---ctaccattacttaatttcagtgtgaacatgaacagattcatttagtctgactttg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741574 126 + 4093027 ATTGCACATTTCCTTGTCATTTTTTTTTA--TTATATCTTctctgtatcc-agagtacatggactaaaaatcca---ctcccattacttaatttcaatgtgaacatgaacagattcatttagtctgactttg i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11078159 124 + 30473821 CCTACACATGTCCTTCTC--ATGTGTTTA--TTATGCGTTctgtgtggcc-agattgcctggactcaaaatcca---gctccatcacttacttgtgatgggaccttaagcagattcatttagcccaactttg i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612881 123 + 58134056 ATTGC----CCTCTCTTC--ATTCATCAG--CTATGCCTCccctgcactc-agactgcatggactcaaaatccagctctgtcagcattaatttgcagtgtaaacttaaacagagtcatttaatctgcctttg i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868042 123 - 2187301 ATTGTACCTCTCCTAGGC--ATTCATTAA--TTATGC-TTAtctatggtc-agactgctttgtctcaaaattca---gttccatcatttgctggcattgtaatcttgagcagattcatttaagtttcctttg i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628550 120 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1629561 258 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 187539 1319 + 958716 I a score=27606.000000 s hg38.chrUn_KI270749v1 124127 2 + 158759 tc s panTro5.chr3 202011363 2 - 202621043 tc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779387 2 - 205426864 tc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9367 2 - 17846 tc i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596108 2 + 86207423 tc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077340 2 + 204787373 tc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009188 2 - 192460366 tc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121429 2 - 17224310 tc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433328 2 - 41321030 tc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504898 2 - 101219884 cc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890738 2 - 924385 tc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731763 2 - 10587913 tc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066653 2 - 98464013 tc i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551364 2 - 2763108 tc i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275771 2 - 4835464 tc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741700 2 + 4093027 tc i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 188858 2 + 958716 tc i tarSyr2.KE939134v1 I 1319 I 477 s otoGar3.GL873534 11078283 2 + 30473821 tt i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613004 2 + 58134056 cc i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868165 2 - 2187301 cc i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 46432 825 + 635616 I e eulMac1.LGHX01000499v1 46226 825 + 631505 I e proCoq1.NW_012148064v1 628550 120 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1629561 258 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I a score=19856.000000 s hg38.chrUn_KI270749v1 124129 3 + 158759 atc s panTro5.chr3 202011365 3 - 202621043 atc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779389 3 - 205426864 atc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9369 3 - 17846 atc i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596110 3 + 86207423 atc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077342 3 + 204787373 acc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009190 3 - 192460366 acc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121431 3 - 17224310 acc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433330 3 - 41321030 acc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504900 3 - 101219884 act i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890740 3 - 924385 acc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731765 3 - 10587913 acc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066655 3 - 98464013 aca i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551366 3 - 2763108 aca i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275773 3 - 4835464 aca i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741702 3 + 4093027 aca i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 47051 3 + 631505 ata i eulMac1.LGHX01000499v1 I 825 I 417 s eulFla1.LGHW01000501v1 47257 3 + 635616 ata i eulFla1.LGHW01000501v1 I 825 I 417 s otoGar3.GL873534 11078285 2 + 30473821 -ta i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16613006 3 + 58134056 aca i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1868167 3 - 2187301 aca i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 628550 120 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1629561 258 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=17172.000000 s hg38.chrUn_KI270749v1 124132 3 + 158759 -ttt s panTro5.chr3 202011368 3 - 202621043 -ttt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779392 3 - 205426864 -ttt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9372 3 - 17846 -ttt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596113 3 + 86207423 -ttt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077345 3 + 204787373 -ttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009193 3 - 192460366 -ttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121434 3 - 17224310 -ttt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433333 3 - 41321030 -ttt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504903 3 - 101219884 -ttt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890743 3 - 924385 -ttt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731768 3 - 10587913 -ttt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066658 3 - 98464013 -ttt i calJac3.chr15 C 0 I 1 s saiBol1.JH378290 2551369 3 - 2763108 -ttt i saiBol1.JH378290 C 0 I 1 s cebCap1.NW_016107467v1 275776 3 - 4835464 -ttt i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3741705 3 + 4093027 -ttt i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11078288 2 + 30473821 -tg- i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16613010 2 + 58134056 -tt- i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1868170 3 - 2187301 att- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e proCoq1.NW_012148064v1 628550 120 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1629561 258 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e ponAbe2.chr3 69667733 813 + 202140232 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=19597.000000 s hg38.chrUn_KI270749v1 124135 2 + 158759 -tt s panTro5.chr3 202011371 2 - 202621043 -tt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779395 2 - 205426864 -tt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9375 2 - 17846 -tt i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69668546 2 + 202140232 -tt i ponAbe2.chr3 I 813 C 0 s nomLeu3.chr21 67596116 2 + 86207423 -tt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077348 2 + 204787373 -tt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009196 2 - 192460366 -tt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121437 2 - 17224310 -tt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433336 2 - 41321030 -tt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504906 2 - 101219884 -tt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890746 2 - 924385 -tt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731771 2 - 10587913 -tt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066662 2 - 98464013 -tt i calJac3.chr15 I 1 C 0 s saiBol1.JH378290 2551373 2 - 2763108 -tt i saiBol1.JH378290 I 1 C 0 s cebCap1.NW_016107467v1 275780 2 - 4835464 -tt i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3741709 2 + 4093027 -tt i aotNan1.NW_018502033v1 I 1 C 0 s otoGar3.GL873534 11078290 2 + 30473821 -tc i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613012 2 + 58134056 -tt i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868173 2 - 2187301 gc- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e proCoq1.NW_012148064v1 628550 120 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1629561 258 - 9149476 I e rhiRox1.KN296641v1 1389987 837 - 1467263 I e papAnu3.chr2 59568280 806 + 187378091 I e nasLar1.chr2 57739456 837 + 181502896 I e rhiBie1.NW_016820128v1 1244266 828 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=30000.000000 s hg38.chrUn_KI270749v1 124137 1 + 158759 c s panTro5.chr3 202011373 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779397 1 - 205426864 c i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9377 1 - 17846 c i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69668548 1 + 202140232 c i ponAbe2.chr3 C 0 I 400 s nomLeu3.chr21 67596118 1 + 86207423 c i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077350 1 + 204787373 c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009198 1 - 192460366 c i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121439 1 - 17224310 c i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433338 1 - 41321030 c i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59569086 1 + 187378091 c i papAnu3.chr2 I 806 C 0 s chlSab2.chr22 64504908 1 - 101219884 c i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890748 1 - 924385 c i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57740293 1 + 181502896 c i nasLar1.chr2 I 837 C 0 s colAng1.NW_012114711v1 6731773 1 - 10587913 c i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1390824 1 - 1467263 c i rhiRox1.KN296641v1 I 837 C 0 s rhiBie1.NW_016820128v1 1245094 1 - 2311269 c i rhiBie1.NW_016820128v1 I 828 C 0 s calJac3.chr15 46066664 1 - 98464013 c i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551375 1 - 2763108 c i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275782 1 - 4835464 c i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741711 1 + 4093027 c i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 628670 1 + 2414909 c i proCoq1.NW_012148064v1 I 120 C 0 s otoGar3.GL873534 11078292 1 + 30473821 c i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613014 1 + 58134056 c i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868175 1 - 2187301 c i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1629561 258 - 9149476 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=47426.000000 s hg38.chrUn_KI270749v1 124138 2 + 158759 tt s panTro5.chr3 202011374 2 - 202621043 tt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779398 2 - 205426864 tt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9378 2 - 17846 tt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596119 2 + 86207423 tt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077351 2 + 204787373 tt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009199 2 - 192460366 tt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121440 2 - 17224310 tt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433339 2 - 41321030 tt i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59569087 2 + 187378091 tt i papAnu3.chr2 C 0 I 198 s chlSab2.chr22 64504909 2 - 101219884 tt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890749 2 - 924385 tt i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57740294 2 + 181502896 tt i nasLar1.chr2 C 0 I 4158 s colAng1.NW_012114711v1 6731774 2 - 10587913 tt i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1390825 2 - 1467263 tt i rhiRox1.KN296641v1 C 0 I 401 s rhiBie1.NW_016820128v1 1245095 2 - 2311269 tt i rhiBie1.NW_016820128v1 C 0 I 401 s calJac3.chr15 46066665 2 - 98464013 tt i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551376 2 - 2763108 tt i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275783 2 - 4835464 tt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741712 2 + 4093027 tt i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 628671 2 + 2414909 tt i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11078293 2 + 30473821 tt i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613015 2 + 58134056 tt i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868176 2 - 2187301 ct i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1629561 258 - 9149476 I e ponAbe2.chr3 69668549 400 + 202140232 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=1562570.000000 s hg38.chrUn_KI270749v1 124140 119 + 158759 atttgtcaaatagagataataacagtagct-ttt--cataaggttgttgggaagattgaatgagtta----agataaagcactcaaactatataaatgtcttattgtactcagagctatgttaagc s panTro5.chr3 202011376 122 - 202621043 atttgtcaaatagagataataacagtagct-ttt--cataaggttgttgggaagatggaatgagttaatacagataaagcactcaaactatataaatgtcttattgtactcagagctatg-taagt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779400 122 - 205426864 atttgtcaaatagagataataacagtagct-ttt--cataaggttgttgggaagatggaatgagttaatacagataaagcactcaaactatataaatgtcttattgtactcagagctatg-taagt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9380 123 - 17846 atttgtcaaatagagataataacagtagct-ttt--cataaggttgttgggaagattgaatgagttaatacagataaagcactcaaactatataaatgtcttattgtactcagagctatgttaagt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596121 122 + 86207423 atttgtcaaatagagataataacagtagct-ttt--tacaaggttgttgggaagattgaatgagttaatacagataaagcactcaaactatataaatgtcttatagtactcagagctatg-taagt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077353 122 + 204787373 atttgtcaaagagagataataacagtagtt-ttt--cataaggttgttgcgaagattgaatgagttcatacagataaagcactcaaactatgtaaatgtcttattgcactcagagctatg-taagt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009201 122 - 192460366 atttgtcaaagagagataataacagtagtt-ttt--cataaggttgttgcgaagattgaatgagttcatacagataaagcactcaaactatgtaaatgtcttattgcactcagagctatg-taagt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121442 122 - 17224310 atttgtcaaagagagataataacagtagtt-ttt--cataaggttgttgcgaagattgaatgagttcatacagataaagcactcaaactatgtaaatgtcttattgtactcagagctatg-taagt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433341 122 - 41321030 atttgtcaaagagagataataacagtagtt-ttt--cataaggttgttgcgaagattgaatgagttcatacagataaagcactcaaactatgtaaatgtcttattgcactcagagctata-taagt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504911 122 - 101219884 atttgtcaaagagagataataacagtagct-ttt--cataaggttgttgcaaagattgaatgagttaatacagataaagcactcaaaccatgtaaatgtcttattgcgctcagagctatg-taagt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890751 122 - 924385 atttgtcaaagagagataataacagtagtt-ttt--cataaggttgttgcgaagattgaatgagttcatacagataaagcactcaaactatgtaaatgtcttattgcactcagagctatg-taagt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731776 122 - 10587913 atttgtcaaagagagataataacagtagct-ttt--cataaggttgttgcgaagattgaatgagttaatacagataaagcactcaaactatgtaaatgtcttgttgcgctcagagctacg-taagt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066667 122 - 98464013 atttgtcaaatagacgtaataacagtagct-ttt--cataaggtggttgagaagattgaatgagttaacacagacaaagcactcaaactatataaatgtcttattgtgctcacaactatg-taagt i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551378 118 - 2763108 atttgtcaaatagaggtaataacagtagct-ttt--cataaggtggttggaaagat----tgagttaacacagataaagcactcaaacaatataaatgtcttattgtgctcagaactatg-taagt i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275785 122 - 4835464 atttgtcaaatagaggtaataacagtagct-ttt--cataagatggttgggaagattgaatgagttaacacagataaatcactcaagcgatataaatgtcttattgtgctcaaaactatg-taagt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741714 122 + 4093027 atttgtcaaatagaggtaataacagtagtt-ttt--cataaggtggttgggaagattgagtgagttaacacagataaagcactcaaactataaaaatgtcttaatgtgctcagaactatg-taagt i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 628673 122 + 2414909 atttgtcaaacagggataatagcagtacct-ttt--catagggttgttaggaagattgaatgagttgatacagataaagcactcagactccagaaatgctttattgcacttagaactatg-taagt i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11078295 115 + 30473821 atttgtccgacagggctaataatgatgctt-ttt--catagcattgctaggaagattgaatgag-taatacagataaag------gacttcagaggtgccttattgcacttagaactgtg-taagt i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613017 120 + 58134056 tattgtaaaatagggataatattaatactt-tttaaaatagggttgctggaaaaactaaatgagttaatacaggaaaaacat----actacataaatgctacattgcatttagagctatg-taaat i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868178 103 - 2187301 atttt-----------tagcaatagtacctattt--tataaggttgttgggaagattgaatgagttattataggtaaaacacttagaCTACATAAATGCTTTATTGCATAAAGAAC---------- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1629561 258 - 9149476 I e rhiRox1.KN296641v1 1390827 401 - 1467263 I e papAnu3.chr2 59569089 198 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668549 400 + 202140232 I e rhiBie1.NW_016820128v1 1245097 401 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=1106645.000000 s hg38.chrUn_KI270749v1 124259 75 + 158759 gttaggtattattACATTTATTATCGGTATTCACATTTTATTATTGTTGTATTGGTGGGCATACAGGCTGCTTTG s panTro5.chr3 202011498 75 - 202621043 gttaggtattattACATTTATTATCGGTATTCACATTTTATTATTGTTGTATTGGTGGGCATACAGGCTGCTTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779522 75 - 205426864 gttaggtattattACATTTATTATCGGTATTCACATTTTATTATTGTTGTATTGGTGGGCATACAGGCTGCTTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9503 75 - 17846 gttaggtattattACATTTATTATCGGTATTCACATTTTATTATTGTTGTATTGGTGGGCATACAGGCTGCTTTG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596243 75 + 86207423 gttaggtattattACATTTATTATCAGTATTCACATTTTATTATTGTTTAATTGGTAGGAATACAGGCTGCTTTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077475 75 + 204787373 gttaggtattattACATTTATTATCGGTATTCACACTTTATTATTGTTGTAGTGGTGGgaatacaggctgctttg i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61009323 75 - 192460366 gttaggtattattACATTTATTATCGGTATTCACACTTTATTATTGTTGTAGTGGTGGGAATACAGGCTGCTTTG i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11121564 75 - 17224310 gttaggtattattACATTTATTATCGGTATTCACACTTTATTATTGTTGTAGTGGTGGGAATACAGGCTGCTTTG i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17433463 75 - 41321030 gttaggtattactACATTTATTATCGGTATTCACACTTTATTATTGTTATAGTGGTGGGAATACAGGCTGTTTTG i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64505033 75 - 101219884 gttaggtattattACATTTATTATCGGTATTCACACTTTATTATTGTTGTAGTGGTGGGAATACAGGCTGCTTTG i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 890873 75 - 924385 gttaggtattattACATTTATTATCGGTATTCACACTTTATTATTGTTGTAGTGGTGGGAATACAGGCTGTTTTG i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6731898 75 - 10587913 gttaggtattattACATTTATTATCTGTATTCACATTTTATTATTGTTGTAGTGGTGGgaatacaggctgctttg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066789 72 - 98464013 gttaggtattattACATTTATTACTGGTATTCACATTTTATTATGGTTG---TGGTGGGAATTCAGGCTGCTTTG i calJac3.chr15 C 0 I 1 s saiBol1.JH378290 2551496 72 - 2763108 gttaggtattattACATTTATTACTGGTATTCACATTTTATTATTGTTG---TGGTGGGAATACAGGCTGCTTTG i saiBol1.JH378290 C 0 I 1 s cebCap1.NW_016107467v1 275907 72 - 4835464 gttaggtattattACATTTATTACTGGTATTCACATTTTATTATTGTTG---TAGTGGGAATACAGGCTGCTTTG i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3741836 72 + 4093027 gttaggtattattACATTTATTACCGGTATTCACATTTTATTATTGTTG---TGGTGGGAATACAGGCTGCTTTG i aotNan1.NW_018502033v1 C 0 I 1 s micMur3.chr32 1629819 75 - 9149476 GTTAGCTATTATTACATGTATTATTGGTATTGGCATTTTATTATTGTTGTAGTGTTGGGAATATAGGATGCTTTG i micMur3.chr32 I 258 C 0 s proCoq1.NW_012148064v1 628795 75 + 2414909 gttagctactattACATTTATTATTGGCATTGGTATTTTATTATTGTCGTAGTGGTGGGAATACAGGATGCTTTG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11078410 64 + 30473821 gttaagtattgttACATTTATTATTAGCATT-GTATTTTATCCT----------GTAGGAATACAGGATGCTTGG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613137 75 + 58134056 gttaactattaGTAAGTTCAGTATTGATATTGGTATGCTATTATTACTGTGGTGGTGGGAATACAGATTGTTTTG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868281 72 - 2187301 ATTAGCTATTATTATATTTATTATTGCTATTGGTATTTTGTTATTGTGA---TGGTGGGAATTCAGGTTGCCTTA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e rhiRox1.KN296641v1 1390827 401 - 1467263 I e papAnu3.chr2 59569089 198 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668549 400 + 202140232 I e rhiBie1.NW_016820128v1 1245097 401 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=20349.000000 s hg38.chrUn_KI270749v1 124334 1 + 158759 G s panTro5.chr3 202011573 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779597 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9578 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596318 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077551 1 + 204787373 g i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61009399 1 - 192460366 G i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11121640 1 - 17224310 G i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17433539 1 - 41321030 G i cerAty1.NW_012009469v1 I 1 C 0 s papAnu3.chr2 59569287 1 + 187378091 G i papAnu3.chr2 I 198 I 207 s chlSab2.chr22 64505109 1 - 101219884 G i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 890949 1 - 924385 G i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6731973 1 - 10587913 g i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46066862 1 - 98464013 G i calJac3.chr15 I 1 C 0 s saiBol1.JH378290 2551569 1 - 2763108 G i saiBol1.JH378290 I 1 C 0 s cebCap1.NW_016107467v1 275980 1 - 4835464 G i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3741909 1 + 4093027 G i aotNan1.NW_018502033v1 I 1 C 0 s micMur3.chr32 1629894 1 - 9149476 G i micMur3.chr32 C 0 I 210 s proCoq1.NW_012148064v1 628870 1 + 2414909 G i proCoq1.NW_012148064v1 C 0 I 595 s otoGar3.GL873534 11078474 1 + 30473821 G i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613212 1 + 58134056 G i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1868353 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e mm10.chr6 45784614 373 - 149736546 I e rhiRox1.KN296641v1 1390827 401 - 1467263 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668549 400 + 202140232 I e rhiBie1.NW_016820128v1 1245097 401 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=1665826.000000 s hg38.chrUn_KI270749v1 124335 140 + 158759 ATACCCTTggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc----cacacacacacaaacat--gcttcacaaatgtctgttgaCAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTGG s panTro5.chr3 202011574 139 - 202621043 ATACCCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc----cacacacacacaaacat--gcttcacaaatgtctgttgaCAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTG-GG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779598 140 - 205426864 ATACCCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc----cacacacacacaaacat--gcttcacaaatgtctgttgaCAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9579 140 - 17846 ATACCCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc----cacacacacacaaacat--gcttcacaaatgtctgttgGCAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAAGTGTGG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596319 140 + 86207423 ATACCCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc----cacacacacaaagacat--gcttcacaaatgtctattgaCAAATCACGTAAATGGCATGGCTT-ACTGATGTCTAACTGTGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077552 140 + 204787373 ataccctgggaataatgttaatctttctctacctttttattct---------c-agcatctagttcaatgt----cacacacacacaaagat--gctttacaaatgtctgttgaCAAATCAGCTAAATGGCATGGTTT-GCTGATGTCTAACTGTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009400 140 - 192460366 ATACCCTGGGAATAATGTTAATCTTTCTCTACCTTTTTATTCT---------C-AGCATCTAGTTCAATGT----CACACACACACAAAGAT--GCTTTACAAATGTCTGTTGACAAATCAGCTAAATGGCATGGCTT-ACTGATGTCTAACTGTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121641 140 - 17224310 ATACCCTGGGAATAATGTTAATCTTTCTCTACctttttattct---------c-agcatctagttcaatgt----cacacacacacaaagat--gctttacaaatgtctgttgaCAAATCAGCTAAATGGCATGGCTT-GCTGATGTCTAACTGTTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433540 140 - 41321030 ATACCCTGGGAATAATGTTAAtctttctctacctttttattct---------c-agcatctagttcaatgt----cacacacacacaaagat--gctttacaaatgtctgttgataaatCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505110 140 - 101219884 ATACCCTGGGAATAATGTTAATCTTTCTCTACCTTTTTATTCT---------C-AGCATCTAGTTCAATGT----CACACACACACAAAGGT--GCTTTACAAATGTCTGTTGACAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTCG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890950 140 - 924385 ATACCCTGGGAATAATGTTAATCTTTCTCTACCTTTTTATTCT---------C-AGCATCTAGTTCAATGT----CACACACACACAAAGAT--GCTTTACAAATGTCTGTTGATAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731975 140 - 10587913 ataccttgggaataatgttaatctttctctacctttttattct---------c-agcatctagttcaatgt----cacacacacaaagagat--gctttacaaatgtctgttgaCAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTCG i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46066863 138 - 98464013 ATATTCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc------cacacacacaaagat--gcttcataaatgtctgttgaCAAATCAGATGAATGGCATGATTT-ACTGATGTCTAACAGTCG i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551570 144 - 2763108 ATACTCTaggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatatcacacacacacacacaaagat--gcttcataaatgtctgttgaCAAATCAGATAAATGGCATGACTT-ACTGATGTCTAATTGTCA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275981 139 - 4835464 ATACTCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgt------cacacacacaaagat--gcttcataaatgtctgttgaCAACTCACATAAATGGCATGACTTAACTGATGTCTAACTGTCG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741910 140 + 4093027 ATACTCTGGGAATCATGTTAATCTTTCTCTACCTTTTTATTCT---------C-AGCATCTAGTTCAATGC----CACACACACATAAAGAT--GCTTCATAAATGTCTATTGACAAATCAGATAAATGGCATGACTT-ACTGATGTCTAACTGTCG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11078475 132 + 30473821 ATACTCCGAG-ATCTTGTTAACTTTTTTTT---TTTTAATTCT---------C-AGCTCCTAGTATAATGC--------TAAACACAAACAC--ACACTATAAATTTTTATTGACTAAACAGATAAATCTCATGGTTT-AGTAATGTCTAACTGTCG i otoGar3.GL873534 C 0 I 268 s canFam3.chr20 16613214 142 + 58134056 ATGAGCCACG-ATCAtgttaatttttctctgcattttgttttt---------caagcacctaatacaatgc----tagacacacaaaaatataagcttaataaatatttattgactaaatagatAAATGGCATGGCTT-ACTGATGTTTGACTATCT i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1868354 147 - 2187301 GACCCTCCAGAATTGTGTTAAT-TTTCTCTACATTTTTTTTTTTTTAatctcc-agcacatagtacaatgc----cagacaca-aaaaagat--gcttagcaaatattcattgaCTAGACTGATGAATGTCATGGCTC-ACTGAAGTCTGACTGACT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1629895 210 - 9149476 I e rhiRox1.KN296641v1 1390827 401 - 1467263 I e papAnu3.chr2 59569288 207 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668549 400 + 202140232 I e rhiBie1.NW_016820128v1 1245097 401 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=222740.000000 s hg38.chrUn_KI270749v1 124475 21 + 158759 AGATAGTTATCATTCATGGGC s panTro5.chr3 202011713 21 - 202621043 AGATAGTTATCACTCATGGGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779738 21 - 205426864 AGATAGTTATCACTCATGGGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9719 21 - 17846 AGATAGTTATCACTCATGGGC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596459 21 + 86207423 AAATAGTTATCACTCATGGAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077692 21 + 204787373 AGATAGTTATCACTCATGGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009540 21 - 192460366 AGATAGTTATCACTCATGGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121781 21 - 17224310 AGATAGTTATCACTCATGGGC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433680 21 - 41321030 AGATAGTTATCACTCATGGGC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505250 21 - 101219884 AGATAGTTATCACTCATGGGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891090 21 - 924385 AAATAGTTATCACTCATGGGC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732115 21 - 10587913 AGATAGTTATCACTCATGGTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067001 21 - 98464013 AGATTGTTATAACTCATGGGC i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551714 21 - 2763108 AGATTATTATAACTCATGGGC i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276120 21 - 4835464 AGATTGTTATAACTCATGGGC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742050 21 + 4093027 AGATTATTAGAACTCATGCGC i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16613356 21 + 58134056 AAATTGTTATCACTCTTGGAT i canFam3.chr20 C 0 I 56 s dasNov3.JH563077 1868501 21 - 2187301 GGAATATAATCACTACTGGAT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1629895 210 - 9149476 I e rhiRox1.KN296641v1 1390827 401 - 1467263 I e papAnu3.chr2 59569288 207 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668549 400 + 202140232 I e rhiBie1.NW_016820128v1 1245097 401 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I e otoGar3.GL873534 11078607 268 + 30473821 I a score=113008.000000 s hg38.chrUn_KI270749v1 124496 10 + 158759 CCACTGAGAG s panTro5.chr3 202011734 10 - 202621043 CCACTGAGAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779759 10 - 205426864 CCACTGAGAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9740 10 - 17846 CCACTGACAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596480 10 + 86207423 CCACTGAGAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077713 10 + 204787373 CCATTGAGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009561 10 - 192460366 CCATTGAGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121802 10 - 17224310 CCATTGAGAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433701 10 - 41321030 CCACTGAGAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505271 10 - 101219884 CCATTGAGAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891111 10 - 924385 CCATTGAGAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732136 10 - 10587913 CCATTGAGAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067022 10 - 98464013 CCATTAAGAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551735 10 - 2763108 CCATTAAGAG i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276141 10 - 4835464 CCATTAAGAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742071 10 + 4093027 CCATTAAGAG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11078875 10 + 30473821 ctactgaggg i otoGar3.GL873534 I 268 I 27 s canFam3.chr20 16613433 10 + 58134056 AAATTAAAAG i canFam3.chr20 I 56 I 2 s dasNov3.JH563077 1868522 9 - 2187301 CCATTAAGG- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e micMur3.chr32 1629895 210 - 9149476 I e rhiRox1.KN296641v1 1390827 401 - 1467263 I e papAnu3.chr2 59569288 207 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668549 400 + 202140232 I e rhiBie1.NW_016820128v1 1245097 401 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=144472.000000 s hg38.chrUn_KI270749v1 124506 12 + 158759 CAAAAAGAAAGC s panTro5.chr3 202011744 12 - 202621043 CAAAAAGAAAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779769 12 - 205426864 CAAAAAGAAAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9750 12 - 17846 CAAAAAGAAAGC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596490 12 + 86207423 CAAAAAGAAAGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077723 12 + 204787373 CAAAAAGTAAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009571 12 - 192460366 CAAAAAGTAAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121812 12 - 17224310 CAAAAAGTAAGC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433711 12 - 41321030 CAAAAAGTAAGC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505281 12 - 101219884 CAAAAAGTAAGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891121 12 - 924385 CAAAAAGTAAGC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732146 12 - 10587913 CAAAAAGTAAGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067032 12 - 98464013 CAAAAAGAAAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551745 12 - 2763108 CAAAAAGAAAAC i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276151 12 - 4835464 CAAAAAGAAAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742081 12 + 4093027 CAAAAAGAAAAC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1630105 12 - 9149476 CAAAAGGAAAGC i micMur3.chr32 I 210 C 0 s otoGar3.GL873534 11078912 12 + 30473821 aaaagaaaaaGC i otoGar3.GL873534 I 27 C 0 s canFam3.chr20 16613445 12 + 58134056 CAAAAGGAAAGG i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1868531 7 - 2187301 -AAAAATC---- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e mm10.chr6 45784614 373 - 149736546 I e rhiRox1.KN296641v1 1390827 401 - 1467263 I e papAnu3.chr2 59569288 207 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668549 400 + 202140232 I e rhiBie1.NW_016820128v1 1245097 401 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=234122.000000 s hg38.chrUn_KI270749v1 124518 17 + 158759 TGACAATGGTAAAATAA s panTro5.chr3 202011756 17 - 202621043 TGACAATGGTAAAATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779781 17 - 205426864 TGACAATGGTAAAATAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9762 17 - 17846 TGACAATGGTAAAATAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596502 17 + 86207423 TGACAAAGGTAAAATAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077735 17 + 204787373 TGACAATGGTAAAATAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009583 17 - 192460366 TGACAATGGTAAAATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121824 17 - 17224310 TGACAATGGTAAAATAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433723 17 - 41321030 TGACAATGGTAAAATAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505293 17 - 101219884 TGACAATGGTAAAATAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891133 17 - 924385 TGACAATGGTAAAATAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732158 17 - 10587913 TGACAATGGTAAAATAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067044 15 - 98464013 TGACAATTGTAAAAT-- i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551757 15 - 2763108 TGACAATGGTAAAAT-- i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276163 15 - 4835464 TGACAATGGTAAAAT-- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742093 15 + 4093027 TGACAATGGTAGAAT-- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1630117 17 - 9149476 TGATAATGGTAAAATAA i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11078924 17 + 30473821 TGATAATGGTGAAATAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784987 17 - 149736546 TGCCATTTATAATATAA i mm10.chr6 I 373 C 0 s canFam3.chr20 16613457 17 + 58134056 TGACAATGGTGAAATAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868538 17 - 2187301 TGTAAATGGTGATATAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e rhiRox1.KN296641v1 1390827 401 - 1467263 I e papAnu3.chr2 59569288 207 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668549 400 + 202140232 I e rhiBie1.NW_016820128v1 1245097 401 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=78409.000000 s hg38.chrUn_KI270749v1 124535 7 + 158759 ACTCAGA s panTro5.chr3 202011773 7 - 202621043 ACTCAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779798 7 - 205426864 ACTCAGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9779 7 - 17846 ACTCAGA i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69668949 7 + 202140232 ACTCAGA i ponAbe2.chr3 I 400 C 0 s nomLeu3.chr21 67596519 7 + 86207423 ACTCAGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077752 7 + 204787373 ACTCAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009600 7 - 192460366 ACTCAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121841 7 - 17224310 ACTCAGA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433740 7 - 41321030 ACTCAGA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505310 7 - 101219884 ACTCAGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891150 7 - 924385 ACTCAGA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732175 6 - 10587913 ACTCAG- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067059 3 - 98464013 ----AGG i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551772 3 - 2763108 ----AGA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276178 3 - 4835464 ----AGA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742108 3 + 4093027 ----AGA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1630134 7 - 9149476 GCTCAGA i micMur3.chr32 C 0 C 0 s otoGar3.GL873534 11078941 7 + 30473821 GCTCAGA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45785004 7 - 149736546 AGTCAGA i mm10.chr6 C 0 C 0 s canFam3.chr20 16613474 7 + 58134056 ATGCAGA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868555 6 - 2187301 ACTCAG- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47260 417 + 635616 I e eulMac1.LGHX01000499v1 47054 417 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e rhiRox1.KN296641v1 1390827 401 - 1467263 I e papAnu3.chr2 59569288 207 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e rhiBie1.NW_016820128v1 1245097 401 - 2311269 I e tarSyr2.KE939134v1 188860 477 + 958716 I a score=16855.000000 s hg38.chrUn_KI270749v1 124542 1 + 158759 T s panTro5.chr3 202011780 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779805 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9786 1 - 17846 T i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69668956 1 + 202140232 C i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21 67596526 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077759 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009607 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121848 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433747 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59569495 1 + 187378091 T i papAnu3.chr2 I 207 C 0 s chlSab2.chr22 64505317 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891157 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s rhiRox1.KN296641v1 1391228 1 - 1467263 T i rhiRox1.KN296641v1 I 401 C 0 s rhiBie1.NW_016820128v1 1245498 1 - 2311269 T i rhiBie1.NW_016820128v1 I 401 C 0 s calJac3.chr15 46067062 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551775 1 - 2763108 T i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276181 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742111 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 189337 1 + 958716 T i tarSyr2.KE939134v1 I 477 I 4 s micMur3.chr32 1630141 1 - 9149476 C i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 47471 1 + 631505 C i eulMac1.LGHX01000499v1 I 417 C 0 s eulFla1.LGHW01000501v1 47677 1 + 635616 C i eulFla1.LGHW01000501v1 I 417 C 0 s otoGar3.GL873534 11078948 1 + 30473821 C i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45785011 1 - 149736546 T i mm10.chr6 C 0 C 0 s canFam3.chr20 16613481 1 + 58134056 T i canFam3.chr20 C 0 C 0 e proCoq1.NW_012148064v1 628871 595 + 2414909 I e nasLar1.chr2 57740296 4158 + 181502896 I e dasNov3.JH563077 1868561 0 - 2187301 C e colAng1.NW_012114711v1 6732181 0 - 10587913 C a score=48741.000000 s hg38.chrUn_KI270749v1 124543 3 + 158759 AGG s panTro5.chr3 202011781 3 - 202621043 AGG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779806 3 - 205426864 AGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9787 3 - 17846 AGG i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69668957 3 + 202140232 AGG i ponAbe2.chr3 C 0 I 394 s nomLeu3.chr21 67596527 3 + 86207423 AGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077760 3 + 204787373 AGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009608 3 - 192460366 AGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121849 3 - 17224310 AGG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433748 3 - 41321030 AGG i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59569496 3 + 187378091 AGG i papAnu3.chr2 C 0 C 0 s chlSab2.chr22 64505318 3 - 101219884 AGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891158 3 - 924385 AGG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732181 1 - 10587913 --G i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1391229 3 - 1467263 AGG i rhiRox1.KN296641v1 C 0 C 0 s rhiBie1.NW_016820128v1 1245499 3 - 2311269 AGG i rhiBie1.NW_016820128v1 C 0 C 0 s calJac3.chr15 46067063 3 - 98464013 AGA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551776 3 - 2763108 AGA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276182 3 - 4835464 AGA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742112 3 + 4093027 AGA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1630142 3 - 9149476 AGC i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 47472 3 + 631505 AGA i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 47678 3 + 635616 AGA i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11078949 3 + 30473821 AGC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45785012 3 - 149736546 AGG i mm10.chr6 C 0 C 0 s canFam3.chr20 16613482 3 + 58134056 AAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868561 1 - 2187301 -G- i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 628871 595 + 2414909 I e nasLar1.chr2 57740296 4158 + 181502896 I e tarSyr2.KE939134v1 189338 4 + 958716 I a score=15070.000000 s hg38.chrUn_KI270749v1 124546 1 + 158759 A s panTro5.chr3 202011784 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779809 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9790 1 - 17846 A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596530 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077763 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009611 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121852 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433751 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59569499 1 + 187378091 A i papAnu3.chr2 C 0 C 0 s chlSab2.chr22 64505321 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891161 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732182 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1391232 1 - 1467263 A i rhiRox1.KN296641v1 C 0 C 0 s rhiBie1.NW_016820128v1 1245502 1 - 2311269 A i rhiBie1.NW_016820128v1 C 0 C 0 s calJac3.chr15 46067066 1 - 98464013 G i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551779 1 - 2763108 G i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276185 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742115 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1630145 1 - 9149476 A i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 47475 1 + 631505 A i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 47681 1 + 635616 A i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11078952 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45785015 1 - 149736546 G i mm10.chr6 C 0 C 0 s canFam3.chr20 16613485 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868562 1 - 2187301 G i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 628871 595 + 2414909 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e tarSyr2.KE939134v1 189338 4 + 958716 I a score=138657.000000 s hg38.chrUn_KI270749v1 124547 6 + 158759 CTCAGA s panTro5.chr3 202011785 6 - 202621043 CTCAGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779810 6 - 205426864 CTCAGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9791 6 - 17846 CTCAGA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596531 6 + 86207423 CTCAGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077764 6 + 204787373 CTCAGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009612 6 - 192460366 CTCAGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121853 6 - 17224310 CTCAGA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433752 6 - 41321030 CTCAGA i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59569500 6 + 187378091 CTCAGA i papAnu3.chr2 C 0 I 494 s chlSab2.chr22 64505322 6 - 101219884 CTCAGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891162 6 - 924385 CTCAGA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732183 6 - 10587913 CTCAGA i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1391233 6 - 1467263 CTCAGA i rhiRox1.KN296641v1 C 0 I 2585 s rhiBie1.NW_016820128v1 1245503 6 - 2311269 CTCAGA i rhiBie1.NW_016820128v1 C 0 I 212 s calJac3.chr15 46067067 6 - 98464013 CCCAGA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551780 6 - 2763108 CTCAGA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276186 6 - 4835464 CTCAGA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742116 6 + 4093027 CTCAGA i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 189342 6 + 958716 ATTAGA i tarSyr2.KE939134v1 I 4 C 0 s micMur3.chr32 1630146 6 - 9149476 CTCAGA i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 47476 6 + 631505 CTCAGA i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 47682 6 + 635616 CTCAGA i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11078953 5 + 30473821 ATT-GC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45785016 6 - 149736546 TTTAAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16613486 6 + 58134056 TTAAGA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868563 6 - 2187301 CTTGGA i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 628871 595 + 2414909 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I a score=47733.000000 s hg38.chrUn_KI270749v1 124553 5 + 158759 AGGAC s panTro5.chr3 202011791 5 - 202621043 AGGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779816 5 - 205426864 AGGAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9797 5 - 17846 AGGAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596537 5 + 86207423 AGGAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077770 5 + 204787373 AGGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009618 5 - 192460366 AGGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121859 5 - 17224310 AGGAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433758 5 - 41321030 AGGAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505328 5 - 101219884 AGGAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891168 5 - 924385 AGGAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732189 5 - 10587913 AGGAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067073 5 - 98464013 AAAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551786 5 - 2763108 AAAAC i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276192 5 - 4835464 AAAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742122 5 + 4093027 AAAAC i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 189348 5 + 958716 CGTAT i tarSyr2.KE939134v1 C 0 I 382 s micMur3.chr32 1630152 5 - 9149476 AGTAG i micMur3.chr32 C 0 C 0 s eulMac1.LGHX01000499v1 47482 5 + 631505 AATAG i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 47688 5 + 635616 AATAG i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11078958 5 + 30473821 AATGC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45785022 3 - 149736546 --GAT i mm10.chr6 C 0 I 2 s canFam3.chr20 16613492 5 + 58134056 AGTAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868569 5 - 2187301 AGTAG i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 628871 595 + 2414909 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245509 212 - 2311269 I a score=122462.000000 s hg38.chrUn_KI270749v1 124558 8 + 158759 CTGTTTTT s panTro5.chr3 202011796 8 - 202621043 CTGTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779821 8 - 205426864 CTGTTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9802 8 - 17846 CTGTTTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596542 8 + 86207423 CTGTTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077775 8 + 204787373 CTGCTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009623 8 - 192460366 CTGCTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121864 8 - 17224310 CTGCTTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433763 8 - 41321030 CTCCTTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505333 8 - 101219884 CTGCTTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891173 8 - 924385 CTGCTTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732194 8 - 10587913 CTGCTTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067078 8 - 98464013 CTTTTGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551791 8 - 2763108 CTTCTGTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276197 8 - 4835464 CTTTTGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742127 8 + 4093027 CTTTTGTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1630157 8 - 9149476 CTGTTTTT i micMur3.chr32 C 0 I 702 s eulMac1.LGHX01000499v1 47487 8 + 631505 CTGTTTTT i eulMac1.LGHX01000499v1 C 0 C 0 s eulFla1.LGHW01000501v1 47693 8 + 635616 CTGTTTTT i eulFla1.LGHW01000501v1 C 0 C 0 s otoGar3.GL873534 11078963 8 + 30473821 CTGTTTGT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45785027 8 - 149736546 CTGTCTTT i mm10.chr6 I 2 C 0 s canFam3.chr20 16613497 8 + 58134056 CTGATTTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868574 8 - 2187301 CTGATCTT i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 628871 595 + 2414909 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245509 212 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I a score=111428.000000 s hg38.chrUn_KI270749v1 124566 6 + 158759 ACTGAC s panTro5.chr3 202011804 6 - 202621043 ACTGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779829 6 - 205426864 ACTGAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9810 6 - 17846 ACTGAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596550 6 + 86207423 ACTGAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077783 6 + 204787373 ACTGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009631 6 - 192460366 ACTGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121872 6 - 17224310 ACTGAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433771 6 - 41321030 ACTGAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505341 6 - 101219884 ACTGAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891181 6 - 924385 ACTGAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732202 6 - 10587913 ACTGAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067086 6 - 98464013 ACTGAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551799 6 - 2763108 ACTGAC i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276205 6 - 4835464 ACTGAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742135 6 + 4093027 ACTGAC i aotNan1.NW_018502033v1 C 0 C 0 s eulMac1.LGHX01000499v1 47495 6 + 631505 ACTGAC i eulMac1.LGHX01000499v1 C 0 I 590 s eulFla1.LGHW01000501v1 47701 6 + 635616 ACTGAC i eulFla1.LGHW01000501v1 C 0 I 590 s otoGar3.GL873534 11078971 6 + 30473821 GCTGAC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45785035 6 - 149736546 AAAGAC i mm10.chr6 C 0 C 0 s canFam3.chr20 16613505 6 + 58134056 ACTGCC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868582 6 - 2187301 ATTGGC i dasNov3.JH563077 C 0 C 0 e proCoq1.NW_012148064v1 628871 595 + 2414909 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245509 212 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I a score=1553267.000000 s hg38.chrUn_KI270749v1 124572 159 + 158759 TTGGTTTTAGGATATATCTACACATAGAGAAGGGTTC-----GGACAATTA-TAGTTA----GC----------AAATCAAGCAACAACAGTGTTTCAGACACTTTG-----ATACCAAAATAATTTTCCTCACTTTAAATATAGCA----GTTTTTCCACAAAAATGGCATGCAT----CAGCCAGGTAAA s panTro5.chr3 202011810 164 - 202621043 TTGGTTTTAGGATATATCTACACATAGAGAAGGGTTC-----AGACAATAATTAGTTA----GC----------AAGTCAAGCAAAAACAGTGTTTCAGACACTTTG-----ATACCAAAATAATTTTCCTCACTTTAAATATAGCAGTTGGTTTTTCCATAAAAATGGCATGCAT----CAGCAAGGTAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779835 164 - 205426864 TTGGTTTTAGGATATATCTACACATAGAGAAGGGTTC-----AGACAATAATTAGTTA----GC----------AAGTCAAGCAAAAACAGTGTTTCAGACACTTTG-----ATACCAAAATAATTTTCCTCACTTTAAATATAGCAGTTTGTTTTTCCATAAAAATGGCATGCAT----CAGCAAGGTAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9816 162 - 17846 TTGGTTTTAGGATATATCTACACATA-AGAAGGGTTC-----GGACAATTA-TAGTTA----GC----------AAGTCAAGCAACAACAGTGTTTCAGACACTTTG-----ATACCAAAATAATTTTCCTCACTTTAAATATAGCAGTTTGTTTTTCCATAAAAATGGCATGCAT----CAGCAAGGTAAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596556 163 + 86207423 TTGGTTATAGGATATAACTACACATGGAGAAGAGGTT-----GGACAATTA-TAGTTA----GC----------AAATCAAGCAACAACAGTGTTTCAGACACTTTG-----ATACCAAAATAATTTTCCTCACTTTAAATATAGCAATTTGTTTTTCCATAAAAATGGCATGTAT----CAGCAAGGTAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077789 168 + 204787373 TTGGTTTTAGCATATATCTACACACGGAGAAGAGGTCCGGTTGGACAATTA-TGGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATACAGCAATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGCAATGTAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009637 160 - 192460366 TTGGTTTTAGCATATATCTACACACGGAGAAGAGGTCCGGTTGGACAATTA-TGGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATACAGCAATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGC-------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121878 168 - 17224310 TTGGTTTTAGCATATATCTACACACGGAGAAGAGGTCCGGTTGGACAATTA-TGGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATACAGCCATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGCAAGGTAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433777 168 - 41321030 TTGGTTTTAGCATATATCTACACATGGAGAAGAGGTCCGGTTGGACAATTA-TGGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATATAGCAATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGGAAGGTAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505347 168 - 101219884 TTGGTTTTAGCATGTATCTACACATGGAGAAGAGGTCTGGTTGGACAATTA-TAGTTA----AC----------AAGTCAAGCAACAACAACGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATATAGCAATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGCAAGGTAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891187 168 - 924385 TTGGTTTTAGCATATATCTACACATGGAGAAGAGGTCCAGTTGGACAATTA-TGGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATATAGCAATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGCAAGGTAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732208 168 - 10587913 TTGGTTTTAGCATATCTCTATACATGGAGAAGAGGTCCGGTTGGAAAGTTA-TAGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATATAGCAATTTGTTTTTCCATCAAAATGGCTTGCAT----CAGCAAGGTAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067092 147 - 98464013 TTGATTTTAGGATATGTCTACACATGGAGAAGGGGTT-----GGACAATTA-TATATATGTTGC----------AAGTCAAGCAACAATAAAGTTTCAGATACTTTG-----ATGCCAAAATAACTTTCCTCACTTTAAATAGAGCAATTTGTTTTTCCATAAAAATG------------------------ i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551805 147 - 2763108 TTGGTTTTAGGATATATCTACACATGGAGAAGGGGTT-----GGACAATTA-TATATATGTTGC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATGCCAAAATAATTTTTCTAACTTTAAATAGAGCAATTTGTTTTTCCATAAAAATG------------------------ i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276211 145 - 4835464 TTGGTTTTAGGATATATCTACACATGGAGAAGGGGTT-----GGACAAT---TATATATGTTGC----------AAGTCAAGCAACAACAAAGTTTCAGATAGGTTA-----ATGCCAAAATCATTTTCCTCACTTTAAATAGAGCAATTTGTTTTTCCATAAAAATG------------------------ i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742141 147 + 4093027 TTGGTTTTAGGATATATCTACACATGGAGAAGGGATT-----GGACAATTA-TATATATGTTTC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATGCCAAAATAATTTTCCTCACTTTAAATAGAGCAATTTGTTTTTCCATGAAAATG------------------------ i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11078977 172 + 30473821 GAGAACTTAGCATTGGTCTACACATGCAGAGATGCTA-----AGACAATTT-TAGTTA----GCTACATAGATTAGGTCAAGCAATAATAATATTTCAGATATGTAG-----ATATTGCAAGAATTTTCCTCACTTTACATACAGTA-TTTTTTTTCCCATAAAAATGCCATGCAG----CAGTAAGGTTAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45785041 123 - 149736546 ATCACCTTAGGCTAAATTTGCATTTGCTTAGATGGCT-----G---AATTA-TAGTTA----GT----------AA------CATAAATGAAGCT--ATATACCT------------------GTGTTGCTCAT-------------GTTTTTTTTTTCATAAAAATA---TGTGG----CATTTGAGTAAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16613511 156 + 58134056 ------AGAGAATATGTCTACACAGGGAGAGT----------ATCTAATTA-TTGTTA----GC----------TATATATTAATCGATAATGTTCTAGATACTTTG-----ACACCACAATAATTTTCCTCACTTTAAATGTTGCAATTTTTATTTCCATCAAAATATCATGCATGAAGCAGCAAGGTAAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868588 177 - 2187301 ATAGCATTAGGATATGTCTACACATAGAAAGTTGTTT-----GGAATATTA-TGGTTA----GCTACATAAATTAGGTCAGTTAGCAACAATGTTCCATATTCATAGGCTGAATGCCACAAAAAATTTCTTC-CACTCAATGCATTAATTTGTATTTCCATCAAAATATCATATGA----CAggaaagtgaa i dasNov3.JH563077 C 0 T 6982 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245509 212 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I a score=55745.000000 s hg38.chrUn_KI270749v1 124731 17 + 158759 AAAGATACCATGTGTAT s panTro5.chr3 202011974 16 - 202621043 AAAGATACCATGTGTA- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779999 16 - 205426864 AAAGATACCATGTGTA- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9978 14 - 17846 AAAGATACCATGTG--- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596719 14 + 86207423 AAAGATACTATGTG--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077957 17 + 204787373 AAAGATACTATGTGTAt i rheMac8.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122046 17 - 17224310 AAAGATACTATGTGTAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433945 17 - 41321030 AAAGATACTATGTGTAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505515 17 - 101219884 AAGGATACTACGCATAt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891355 17 - 924385 AAAGATACTATGTGTAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732376 17 - 10587913 AAAGATACTATGTGTAt i colAng1.NW_012114711v1 C 0 C 0 s otoGar3.GL873534 11079149 3 + 30473821 AAA-------------- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45785164 17 - 149736546 ATTGGCACTATATGTAT i mm10.chr6 C 0 I 2031 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245509 212 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I e aotNan1.NW_018502033v1 3742288 0 + 4093027 C e cebCap1.NW_016107467v1 276356 0 - 4835464 C e canFam3.chr20 16613667 0 + 58134056 C e dasNov3.JH563077 1868765 6982 - 2187301 T e saiBol1.JH378290 2551952 0 - 2763108 C e calJac3.chr15 46067239 0 - 98464013 C e macFas5.chr2 61009797 0 - 192460366 C a score=16288.000000 s hg38.chrUn_KI270749v1 124748 10 + 158759 ATATCACTCA s rheMac8.chr2 66077974 10 + 204787373 atatctctta i rheMac8.chr2 C 0 I 3 s macNem1.NW_012018021v1 11122063 10 - 17224310 ATATCTCTCA i macNem1.NW_012018021v1 C 0 I 3 s cerAty1.NW_012009469v1 17433962 10 - 41321030 ATATTTCTCA i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64505532 10 - 101219884 atatctctca i chlSab2.chr22 C 0 I 3 s manLeu1.NW_012098965v1 891372 10 - 924385 ATATTTCtca i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6732393 10 - 10587913 atatctctca i colAng1.NW_012114711v1 C 0 I 3 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e gorGor5.CYUI01007532v1 9992 0 - 17846 C e rhiBie1.NW_016820128v1 1245509 212 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I e otoGar3.GL873534 11079152 0 + 30473821 C e aotNan1.NW_018502033v1 3742288 0 + 4093027 C e cebCap1.NW_016107467v1 276356 0 - 4835464 C e canFam3.chr20 16613667 0 + 58134056 C e dasNov3.JH563077 1868765 6982 - 2187301 T e saiBol1.JH378290 2551952 0 - 2763108 C e calJac3.chr15 46067239 0 - 98464013 C e macFas5.chr2 61009797 0 - 192460366 C e nomLeu3.chr21 67596733 0 + 86207423 C e panPan2.chr3 204780015 0 - 205426864 C e panTro5.chr3 202011990 0 - 202621043 C a score=1762.000000 s hg38.chrUn_KI270749v1 124758 7 + 158759 TGTGTAT s panTro5.chr3 202011990 3 - 202621043 ----TAt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780015 3 - 205426864 ----TAt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9992 3 - 17846 ----TAt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596733 3 + 86207423 ----TAC i nomLeu3.chr21 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245509 212 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I e otoGar3.GL873534 11079152 0 + 30473821 C e manLeu1.NW_012098965v1 891382 3 - 924385 I e macNem1.NW_012018021v1 11122073 3 - 17224310 I e rheMac8.chr2 66077984 3 + 204787373 I e aotNan1.NW_018502033v1 3742288 0 + 4093027 C e cebCap1.NW_016107467v1 276356 0 - 4835464 C e canFam3.chr20 16613667 0 + 58134056 C e dasNov3.JH563077 1868765 6982 - 2187301 T e saiBol1.JH378290 2551952 0 - 2763108 C e calJac3.chr15 46067239 0 - 98464013 C e colAng1.NW_012114711v1 6732403 3 - 10587913 I e chlSab2.chr22 64505542 3 - 101219884 I e cerAty1.NW_012009469v1 17433972 3 - 41321030 I e macFas5.chr2 61009797 0 - 192460366 C a score=5460.000000 s hg38.chrUn_KI270749v1 124765 4 + 158759 ATAT s panTro5.chr3 202011993 4 - 202621043 atat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780018 4 - 205426864 atat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9995 4 - 17846 atat i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596736 4 + 86207423 Atat i nomLeu3.chr21 C 0 C 0 s rhiBie1.NW_016820128v1 1245721 4 - 2311269 atat i rhiBie1.NW_016820128v1 I 212 I 2597 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e tarSyr2.KE939134v1 189353 382 + 958716 I e otoGar3.GL873534 11079152 0 + 30473821 C e manLeu1.NW_012098965v1 891382 3 - 924385 I e macNem1.NW_012018021v1 11122073 3 - 17224310 I e rheMac8.chr2 66077984 3 + 204787373 I e aotNan1.NW_018502033v1 3742288 0 + 4093027 C e cebCap1.NW_016107467v1 276356 0 - 4835464 C e canFam3.chr20 16613667 0 + 58134056 C e dasNov3.JH563077 1868765 6982 - 2187301 T e saiBol1.JH378290 2551952 0 - 2763108 C e calJac3.chr15 46067239 0 - 98464013 C e colAng1.NW_012114711v1 6732403 3 - 10587913 I e chlSab2.chr22 64505542 3 - 101219884 I e cerAty1.NW_012009469v1 17433972 3 - 41321030 I e macFas5.chr2 61009797 0 - 192460366 C a score=1000.000000 s hg38.chrUn_KI270749v1 124769 1 + 158759 C s panTro5.chr3 202011997 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780022 1 - 205426864 c i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9999 1 - 17846 c i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596740 1 + 86207423 c i nomLeu3.chr21 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I e otoGar3.GL873534 11079152 0 + 30473821 C e manLeu1.NW_012098965v1 891382 3 - 924385 I e macNem1.NW_012018021v1 11122073 3 - 17224310 I e rheMac8.chr2 66077984 3 + 204787373 I e aotNan1.NW_018502033v1 3742288 0 + 4093027 C e cebCap1.NW_016107467v1 276356 0 - 4835464 C e canFam3.chr20 16613667 0 + 58134056 C e dasNov3.JH563077 1868765 6982 - 2187301 T e saiBol1.JH378290 2551952 0 - 2763108 C e calJac3.chr15 46067239 0 - 98464013 C e colAng1.NW_012114711v1 6732403 3 - 10587913 I e chlSab2.chr22 64505542 3 - 101219884 I e cerAty1.NW_012009469v1 17433972 3 - 41321030 I e macFas5.chr2 61009797 0 - 192460366 C a score=1866.000000 s hg38.chrUn_KI270749v1 124770 2 + 158759 AT s panTro5.chr3 202011998 2 - 202621043 ac i panTro5.chr3 C 0 I 6 s panPan2.chr3 204780023 2 - 205426864 ac i panPan2.chr3 C 0 I 6 s gorGor5.CYUI01007532v1 10000 2 - 17846 ac i gorGor5.CYUI01007532v1 C 0 I 2 s nomLeu3.chr21 67596741 2 + 86207423 ac i nomLeu3.chr21 C 0 I 2 s calJac3.chr15 46067239 1 - 98464013 -T i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551952 1 - 2763108 -T i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276356 1 - 4835464 -T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742288 1 + 4093027 -T i aotNan1.NW_018502033v1 C 0 C 0 s dasNov3.JH563077 1861783 2 - 2187301 AT i dasNov3.JH563077 T 6982 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I e otoGar3.GL873534 11079152 0 + 30473821 C e manLeu1.NW_012098965v1 891382 3 - 924385 I e macNem1.NW_012018021v1 11122073 3 - 17224310 I e rheMac8.chr2 66077984 3 + 204787373 I e canFam3.chr20 16613667 0 + 58134056 C e colAng1.NW_012114711v1 6732403 3 - 10587913 I e chlSab2.chr22 64505542 3 - 101219884 I e cerAty1.NW_012009469v1 17433972 3 - 41321030 I e macFas5.chr2 61009797 0 - 192460366 C a score=-8216.000000 s hg38.chrUn_KI270749v1 124772 48 + 158759 CATGCATCAGCAAGGTAAAAAAGA--TACCATGT------GTATATATCATCTTTT s gorGor5.CYUI01007532v1 10004 4 - 17846 ---------------------aga-------------------------------c i gorGor5.CYUI01007532v1 I 2 C 0 s nomLeu3.chr21 67596745 4 + 86207423 ---------------------aga-------------------------------c i nomLeu3.chr21 I 2 C 0 s macFas5.chr2 61009797 34 - 192460366 -----------AAGGTAAAAAAGA--TACTATGT------GTAtatatctctc--- i macFas5.chr2 C 0 I 4 s calJac3.chr15 46067240 37 - 98464013 CATGCAACAGCAAGGTAAAAAAGA--TACTATAT------GTATA----------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551953 37 - 2763108 CATGCAATGGCAAGGTAAAAAAGA--CACTATGT------GTATA----------- i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276357 37 - 4835464 CATGCAACAGCAATATAAAAAGGA--TACTATGT------GTATA----------- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742289 37 + 4093027 CATGCAACAGCAAGGTAAAAAAGA--TACTATGT------GTATA----------- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11079152 27 + 30473821 --------------------AAAA--TACT-TGT------GTATAGATCAGGATTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613667 24 + 58134056 -----------GAGGTAAAGAGAA--TATAATGC------GTA------------- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1861785 43 - 2187301 CATATGACAGCAGGGTGAAAAGACTCTGCtatatcagtcagca------------- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I e manLeu1.NW_012098965v1 891382 3 - 924385 I e macNem1.NW_012018021v1 11122073 3 - 17224310 I e rheMac8.chr2 66077984 3 + 204787373 I e colAng1.NW_012114711v1 6732403 3 - 10587913 I e chlSab2.chr22 64505542 3 - 101219884 I e cerAty1.NW_012009469v1 17433972 3 - 41321030 I e panPan2.chr3 204780025 6 - 205426864 I e panTro5.chr3 202012000 6 - 202621043 I a score=1599382.000000 s hg38.chrUn_KI270749v1 124820 148 + 158759 ttcctgcag----aaaaaagatgac----------actcaaatttggtaatttgaggaatgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-GGCAGTAACCTACAGAc---------------tatgcctgaaaggatggagggaaata s panTro5.chr3 202012006 148 - 202621043 ttgctgcag----aaaaaagatgac----------actcaaatttggtaatctgaggaatgtctaaa-----a-caagcactatttgaatagatgtgggcagggtatagg-aaaattgaaaaggaa-GGCAGTAACCTACAGAc---------------tatgcctgaaaggatggagggaaata i panTro5.chr3 I 6 C 0 s panPan2.chr3 204780031 148 - 205426864 ttgctgcag----aaaaaagatgac----------actcaaatttggtaatctgaggaatgtctaaa-----a-caagcactatttgaatagatgtgggcagggtatagg-aaaattgaaaaggaa-GGCAGTAACCTACAGAc---------------tatgcctgaaaggatggaggaaaata i panPan2.chr3 I 6 C 0 s gorGor5.CYUI01007532v1 10008 148 - 17846 ttcctgcag----aaaaaagatgac----------actcaaatttggtaatttgaggaatgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-GGCAGTAACCTACAGAc---------------tatgcctgaaaggatggagggaaata i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596749 148 + 86207423 ttcctgcag----aaaaaagatgac----------actcaaatgtggtaatttgaggaatgtctaaa-----a-caagcactatttgaatagatgtgggcaggttacagg-aaaattgaaaaggaa-GGCAGTAACCTACAGAc---------------tatgcctaaaaggatggagggaaata i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077987 148 + 204787373 ttcctgcag----agaaaagatgac----------actcaaatttggtaatttgaggagtgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-GGCAGTAATCTACAGAc---------------tatgactgaaaggatggagggaaata i rheMac8.chr2 I 3 C 0 s macFas5.chr2 61009835 148 - 192460366 ttcctgcag----agaaaagatgac----------actcaaatttggtaatttgaggagtgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-ggcagtaatctacagac---------------tatgactgaaaggatggagggaaata i macFas5.chr2 I 4 C 0 s macNem1.NW_012018021v1 11122076 148 - 17224310 TTCCTGCAG----AGAAAAGATGAC----------ACTCAAATTTGGTAATTTGAGGAGTGTCTAAA-----A-CAAGCACTATTTGAATAGATGTGGGCCGGTTATAGG-AAAATTGAAAAGGAA-GGCAGTAATCTACAGAc---------------tatgactgaaaggatggagggaaata i macNem1.NW_012018021v1 I 3 C 0 s cerAty1.NW_012009469v1 17433975 148 - 41321030 TTCCTGCAG----AGAAAAGATGAC----------ACTCAAATTTGGTAATTTGAGGAGTGTCTAAA-----A-CAAGCACTATTTGAATAGATGGGGGCAGGTTATAGG-AAAATTGAAAAGGAA-GGCAGTAATCTACAGAc---------------tatgactgaaaggatggagggaaata i cerAty1.NW_012009469v1 I 3 C 0 s chlSab2.chr22 64505545 148 - 101219884 ttcctgcag----agaaaagatgac----------actcaaatttggtaatttgaggagtgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-ggcagtaatctacagac---------------tatgcctgaaaggatggagggaaata i chlSab2.chr22 I 3 C 0 s manLeu1.NW_012098965v1 891385 148 - 924385 ttcctgcag----agaaaagatgac----------actcaaatttggtaatttgaggagtgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-GGCAGTAATCTACAGAc---------------tatgactgaaaggatggagggaaata i manLeu1.NW_012098965v1 I 3 C 0 s colAng1.NW_012114711v1 6732406 148 - 10587913 ttcctgcag----agaaaagatgac----------actcaaatttggtaatttgaggagtgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-GGCAGTAATCCGCAGAc---------------tatgcctgaaaggatggagggaaata i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46067277 149 - 98464013 --CCTGCCG--AAAaaaaagatgac----------actcaaatttggtaatttgagaagtgtctaaa-----a-caaggagtatttgaatggatgtgggcagattaagggaaaaattgaaaaggaa-ggcagaaacctacaggc---------------tatgcctgaaaggttggagggaaata i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551990 153 - 2763108 --cctgcag--aaaaaaaagatgac----------actcaaatttggtaatacaatgagtatttgaatgaata-caaggagtatttgaatgaatgtgcgcagattacagg-aaaattgaaaaggaa-ggcagaaacctacaggc---------------catgcctgaaaggatggagggaaata i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276394 150 - 4835464 --CCTGCAGAAAAAAAAAAGATGAC----------ACTCAAATTTGGTAATTTGAGAAGTGTCTAAA-----A-CAAGGAGTATTTGAATGAATGTGGGGAGATTATAGG-AAAATTGAAAAGGAA-GGCAGAAACCTACAGGT---------------CATgcctgaaaggatggagggaaata i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742326 136 + 4093027 --CCTACAG--AAAAAAAAGATGAC----------ACTCAAATATGGTAATTTGAGAAGTGTCTAAA-----A-CAAGGAGTATTTGAATGGATATGGGCAGGTTATGGC-------------GAA-GGCAGAAACCTACAGGc---------------tatgcctgaaaggatggagggaaata i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11079179 142 + 30473821 ---TTGCAG----AAAAGAGATAAC--------ATACTCAAAATTAATAACATGAGGAGTGT-TGAA-----A-CTGAGATGATTTAAACAGATACG---AAGTTGTAGG-AAAACCAAAAATGAGCACCACTAACCTAAAAAC---------------TCTGCTTACAGGGATGAAGGGGAA-- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613691 157 + 58134056 -TCACTcag----aagac-----at----------actcaaaattagtcatctaagaagagtctaaa-----agcagaaactcttttaa-aggtgtgggcaacttgtagc-aaaatcagaaggggt-gccagtacccaaaaggcagtgtgttaccaggatatgaatgaaagggtgcagggagaaa i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1861828 148 - 2187301 ttccagcag----gaaaaagatggcaagatgacatattcagattgagtaaactgaggtgattctaaa-----a-caaaca-----------------agtaagttgtagg-gaaatcacaagggga-accaatattctaaagacactgtct--------tatgcctgaagaaatgagggaagaga i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e proCoq1.NW_012148064v1 628871 595 + 2414909 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I a score=336095.000000 s hg38.chrUn_KI270749v1 124968 23 + 158759 agagtttgcaggaatctggaggg s panTro5.chr3 202012154 23 - 202621043 agagtttgcaggaatctggaggg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780179 23 - 205426864 agagtttgcaggaatctggaggg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10156 23 - 17846 agagtttgcaggaatctggaggg i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596897 23 + 86207423 agagtttgcaggaatctggaagg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078135 23 + 204787373 agagtttgcgggaatctggaggg i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61009983 23 - 192460366 agagtttgcgggaatctggaggg i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11122224 23 - 17224310 agagtttgcgggaatctggaggg i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17434123 23 - 41321030 agagtttgcgggaatctggaggg i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64505693 23 - 101219884 agagtttgcaggaatctggaggg i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 891533 23 - 924385 agagtttgcgggaatctggaggg i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6732554 23 - 10587913 agagtttgcgggaatctggaggg i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46067426 23 - 98464013 agagtttgcaggaatctggaggg i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552143 23 - 2763108 agagtttgcaggaatctggaggg i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276544 23 - 4835464 agggtttgcaggaatctggaggg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742462 23 + 4093027 agagtttgcaggaatctggaggg i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 629466 23 + 2414909 agagtttacaggaacctggagag i proCoq1.NW_012148064v1 I 595 C 0 s otoGar3.GL873534 11079321 23 + 30473821 AGAGTTTATGGAAGCCTggagag i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613848 22 + 58134056 agagtttacag-aacctggaggg i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1861976 22 - 2187301 aaagtcc-ctggaaactggagtt i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I a score=7098.000000 s hg38.chrUn_KI270749v1 124991 1 + 158759 a s panTro5.chr3 202012177 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780202 1 - 205426864 a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10179 1 - 17846 a i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596920 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s calJac3.chr15 46067449 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552166 1 - 2763108 a i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276567 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742485 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 629489 1 + 2414909 a i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11079344 1 + 30473821 a i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613870 1 + 58134056 a i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1861998 1 - 2187301 a i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I e manLeu1.NW_012098965v1 891556 1 - 924385 I e macNem1.NW_012018021v1 11122247 1 - 17224310 I e rheMac8.chr2 66078158 1 + 204787373 I e colAng1.NW_012114711v1 6732577 1 - 10587913 I e chlSab2.chr22 64505716 1 - 101219884 I e cerAty1.NW_012009469v1 17434146 1 - 41321030 I e macFas5.chr2 61010006 1 - 192460366 I a score=23787.000000 s hg38.chrUn_KI270749v1 124992 3 + 158759 aaa s panTro5.chr3 202012178 3 - 202621043 aaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780203 3 - 205426864 aaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10180 3 - 17846 aaa i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596921 3 + 86207423 aaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078159 3 + 204787373 aaa i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61010007 3 - 192460366 aaa i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11122248 3 - 17224310 aaa i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17434147 3 - 41321030 aaa i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64505717 3 - 101219884 aaa i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 891557 3 - 924385 aaa i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6732578 3 - 10587913 aaa i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46067450 3 - 98464013 aaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552167 3 - 2763108 aaa i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276568 3 - 4835464 aaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742486 3 + 4093027 aaa i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 629490 3 + 2414909 aag i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11079345 3 + 30473821 ctg i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613872 2 + 58134056 ag- i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1861999 3 - 2187301 gag i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69668960 394 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189353 382 + 958716 I a score=2790.000000 s hg38.chrUn_KI270749v1 124995 1 + 158759 -c s panTro5.chr3 202012181 1 - 202621043 -c i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780206 1 - 205426864 -c i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10183 1 - 17846 -c i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69669354 1 + 202140232 -c i ponAbe2.chr3 I 394 I 424 s nomLeu3.chr21 67596924 1 + 86207423 -c i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078162 1 + 204787373 -c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010010 1 - 192460366 -c i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122251 1 - 17224310 -c i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434150 1 - 41321030 -c i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505720 1 - 101219884 -c i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891560 1 - 924385 -c i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732581 1 - 10587913 -g i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067453 1 - 98464013 -c i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552170 1 - 2763108 -c i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276571 1 - 4835464 -c i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742489 1 + 4093027 -c i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 189735 1 + 958716 -C i tarSyr2.KE939134v1 I 382 I 491 s proCoq1.NW_012148064v1 629493 1 + 2414909 -g i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11079348 1 + 30473821 -c i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613874 1 + 58134056 -c i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862002 1 - 2187301 g- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I a score=1062109.000000 s hg38.chrUn_KI270749v1 124996 90 + 158759 tgtgtggagaga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccagggaaa---caagtacctt s panTro5.chr3 202012182 90 - 202621043 tgtgtggagaga-acacttgacaagaaatgtgacctctggtggggagatgcagtcagcttgga---gagaggaagccagggaaa---gaagtacctt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780207 90 - 205426864 tgtgtggagaga-acacttgacaagaaatgtgacctctggtggggagatgcagtcagcttgga---gagaggaagccagggaaa---caagtacctt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10184 90 - 17846 tgtgtggagaga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccagggaaa---caagtacctt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596925 90 + 86207423 tgtgtggagaga-acactttacaagaaatgtgacctctggtaggcagatgcagtcagcttggc---gagaagaagccagggaaa---caagtacttt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078163 90 + 204787373 tgtgtggaggga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccaggaaaa---caagtacctt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010011 90 - 192460366 tgtgtggaggga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccaggaaaa---caagtacctt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122252 90 - 17224310 tgtgtggaggga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccaggaaaa---caagtacctt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434151 90 - 41321030 tgtgtggaggga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccagggaaa---caagtacctt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505721 90 - 101219884 tgtgtggaggga-atacttgacaagaaatgtgacctttggtgggcagatgcagtcagcttgga---gagaggaagccagggaaa---caagtacctt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891561 90 - 924385 tgtgtggaggga-acactagacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccagggaaa---caagtacctt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732582 90 - 10587913 tgtgtggaggga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcctgga---gagaggaagccagggaaa---caagtacctt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067454 90 - 98464013 tgtgtggagaga-ccacttgacaagatatgtgacctctggtgggcagatgctgtcagcttgaa---gagaggaagccaggggaa---caagtacctc i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552171 89 - 2763108 tgtgtgaagaga-ccacttgacaagaaatgtgacctctggtgggtagatgccatcagcttgga---gagaggaagccaggggaa---caagta-ctt i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276572 89 - 4835464 tgtgtggagaga-ccacttgacaagagatgtgacctctggtgggcagatgccgtcagcttgga---gagaggaagccaggggga---caagta-ctt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742490 90 + 4093027 tgtgtggagaga-ccacttgacaagaaatgtgacctctggtgggctgatgccatcagcttgga---gagaggaagccaggggaa---caagtacctt i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 629494 93 + 2414909 tgtgtggagagg-ccaccttacgggaagtgtgacctctcgcaggcagatgcggtcagcttgga---aggaggaagccaggggaaaactatgtacctt i proCoq1.NW_012148064v1 C 0 I 1 s otoGar3.GL873534 11079349 35 + 30473821 tgtgtggagagg-ccgcctagcaggagg-gtg------------------------------------------------------------acctt i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16613875 84 + 58134056 tctgtggagaggcccacgtggcaggaagtatgatctttgatggaaggata----cagGATGTA---AGAAGGAAGCCAGAGAAA---TA---ATCTT i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1862003 86 - 2187301 --tgtgtagaga-ggagctaacaagagctgtgaccttgggtggagat-tacagtca---tggaattaggaggacaccaagagaa---taaataAAT- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e mm10.chr6 45785181 2031 - 149736546 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669355 424 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189736 491 + 958716 I a score=136521.000000 s hg38.chrUn_KI270749v1 125086 10 + 158759 acttctctct s panTro5.chr3 202012272 10 - 202621043 acttctctct i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780297 10 - 205426864 acttctctct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10274 10 - 17846 acttctctct i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597015 10 + 86207423 acttctctct i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078253 10 + 204787373 acttctctct i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61010101 10 - 192460366 acttctctct i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11122342 10 - 17224310 acttctctct i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17434241 10 - 41321030 acttctctct i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64505811 10 - 101219884 acttctctct i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 891651 10 - 924385 acttctctct i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6732672 10 - 10587913 acttctctct i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067544 10 - 98464013 acccctctct i calJac3.chr15 C 0 I 1 s saiBol1.JH378290 2552260 10 - 2763108 atccctctct i saiBol1.JH378290 C 0 I 1 s cebCap1.NW_016107467v1 276661 10 - 4835464 acccctctct i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3742580 10 + 4093027 atccctctct i aotNan1.NW_018502033v1 C 0 I 1 s proCoq1.NW_012148064v1 629588 10 + 2414909 acttctctct i proCoq1.NW_012148064v1 I 1 C 0 s otoGar3.GL873534 11079385 10 + 30473821 acttctctct i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45787212 10 - 149736546 ATTTATCTCC i mm10.chr6 I 2031 C 0 s canFam3.chr20 16613960 9 + 58134056 ACTTCACTT- i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1862089 7 - 2187301 ACTTCTC--- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59569506 494 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669355 424 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189736 491 + 958716 I a score=16670.000000 s hg38.chrUn_KI270749v1 125096 1 + 158759 t s panTro5.chr3 202012282 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780307 1 - 205426864 t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10284 1 - 17846 t i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597025 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078264 1 + 204787373 t i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61010112 1 - 192460366 t i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11122353 1 - 17224310 t i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17434252 1 - 41321030 t i cerAty1.NW_012009469v1 I 1 C 0 s papAnu3.chr2 59570000 1 + 187378091 t i papAnu3.chr2 I 494 I 228 s chlSab2.chr22 64505822 1 - 101219884 t i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 891662 1 - 924385 t i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6732682 1 - 10587913 t i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46067555 1 - 98464013 t i calJac3.chr15 I 1 C 0 s saiBol1.JH378290 2552271 1 - 2763108 t i saiBol1.JH378290 I 1 C 0 s cebCap1.NW_016107467v1 276672 1 - 4835464 t i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3742591 1 + 4093027 t i aotNan1.NW_018502033v1 I 1 C 0 s proCoq1.NW_012148064v1 629598 1 + 2414909 t i proCoq1.NW_012148064v1 C 0 I 1 s otoGar3.GL873534 11079395 1 + 30473821 t i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45787222 1 - 149736546 T i mm10.chr6 C 0 C 0 s canFam3.chr20 16613969 1 + 58134056 C i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669355 424 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189736 491 + 958716 I e dasNov3.JH563077 1862096 0 - 2187301 C a score=1332165.000000 s hg38.chrUn_KI270749v1 125097 112 + 158759 cctcagataccttttcctgccgtcattcctccagaagtttctcttgacagccaaacaaccaggagccagtagaaagaaaactctaagttagaactcacacacgtcagtttca s panTro5.chr3 202012283 112 - 202621043 cctcagataccttttcctgccctcattcctccagaagtttctcttgacagccaaacaaccaggagccagtagaaagaaaactccaagttagaactcacacacgtcagtttca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780308 112 - 205426864 cctcagataccttttcctgccctcattcctccagaagtttctcttgacagccaaacaaccaggagccagtagaaagaaaactccaagttagaactcacacacgtcagtttca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10285 111 - 17846 cctcagataccttttcctgccgtcattcctccagaagtttctcttgacagccaaacaaccaggag-cagtagaaagaaaactccaagttagaactcacacacgtcagtttca i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597026 112 + 86207423 cctcagataccttttcctgccctcattcctccagaagtttctcttgacagccaaacaaccaggagccagtagaaagaaaactccaagttagaactcacacacgtcagtttca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078265 112 + 204787373 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccaggagccagtaggaaggaaagctcaagttagaactcacacaggtcagtttca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010113 112 - 192460366 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccaggagccagcaggaaggaaagcccaagttagaactcacacaggtcagtttca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122354 112 - 17224310 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccaggagccagtaggaaggaaagcccaagttagaactcacacaggtcagtttca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434253 112 - 41321030 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccaggagccagtaggaaggaaaccccaagttagaactcacacaggtcagtttca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505823 112 - 101219884 cctcagaggccttttcctgccctccttcctccagaagtttctcttgatagtcaaacaaccaggagccagtaggaaggaaaccccaagttagaactcacacaggtcagtttca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891663 112 - 924385 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccaggagccagtaggaaggaaaccccaagttagaactcacacaggtcagtttca i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732684 112 - 10587913 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccagaagccagtaggaaggaaaccccaagttagaactcacacaggtcagtttca i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46067556 112 - 98464013 tcttagattccttttcctgccctccttcctccagaagtttctcttgatagccagacaaccagaagccagtagaaaggaaaccccatgttagaactcacacaggtcagttcca i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552272 112 - 2763108 ccttagattcctcttcctgccctccttcctccagaagtttctctttatagccgaacaaccaggagccagtagaaaggaaaccccatgttagaactcacacagatcagttcca i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276673 112 - 4835464 ccttagattccttttcctgccttccttcctccagaattttctcttgatagccaaacaaccaggagccagtagaaaggaaaccccatgttagaacctacacaggtcagttcca i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742592 112 + 4093027 ccttagattccttttcctgccctccttcctccagaagtttctcttgatagccaaacaaccaggagccagtagaaaggaaaccccatgttagaactcacacaggtcagttcca i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 629600 111 + 2414909 cctcggataccttcttcttccctccttcctccacaaagttctcttcataaccgaacaaccagaagccagtggaaaggaaggccagtgttagcacccatgca-gtcagttctg i proCoq1.NW_012148064v1 I 1 C 0 s otoGar3.GL873534 11079397 81 + 30473821 cctc--ataccttctttcttcctccttcccacaaagagttctcttcctagccaaacaaccagaagccagtggaaaggaagACC----------------------------- i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45787223 91 - 149736546 CCTCAAAAATTTTTTCCTCCCCTCC-ACTTCCAGAGACTT-TTTTCATTACCAAACAGTTAGATGCCTACAGAAGGGAAACTCAGGGT----GTTCA--------------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16613970 111 + 58134056 CCTCAAAC-CCTTCTCCCTCCCTCCTTTCTCCAGAGGGTGCTCAGCACTACTACAATACTACAAGTCAGTAGAAGGGAAACCCAATGTTATAACCCATCCAGGGTAGCTCCA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862096 47 - 2187301 ---CATATACTTTTTCCCTccc-------------------------------aataa------------------------------tacaaaccatgcaggtcaattcc- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 47707 590 + 635616 I e eulMac1.LGHX01000499v1 47501 590 + 631505 I e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570001 228 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669355 424 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189736 491 + 958716 I a score=868261.000000 s hg38.chrUn_KI270749v1 125209 62 + 158759 tgaacac-agagcagggtagggaaggctgaag--agtaat---tt-----ggaag------agcaaaggaaagatgtcG s panTro5.chr3 202012395 62 - 202621043 tgaacac-agagcagggtagggaagcctgaag--agtaat---tt-----ggaag------agcaaaggaaagatgtcG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780420 62 - 205426864 tgaacac-agagcagggtagggaaggctgaag--agtaat---tt-----ggaag------agcaaaggaaagatgtcG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10396 62 - 17846 tgaacac-agagcagggtagggaaggctgaag--agtaat---tt-----ggaag------agcaaaggaaagatGACG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597138 62 + 86207423 tgaacac-agagcagggtagggaaggctgaag--agtaat---tt-----ggaag------atcaaaggaaagatgtcG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078377 62 + 204787373 tgaacac-agagcagggtagggaaggctgaag--agtaat---tt-----ggaag------agcaaaggaaagatgtTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010225 62 - 192460366 agaacac-agagcagggtagggaaggctgaag--agtaat---tt-----ggaag------agcaaaggaaagatgtTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122466 62 - 17224310 tgaacac-agagcagggtagggaaggctgaag--agtaat---tt-----ggaag------agcaaaggaaagatgtTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434365 62 - 41321030 tgaacac-agagcagggtagggaaggctgaag--agtaat---tt-----ggaag------agcaaaggaaagatgttg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505935 62 - 101219884 tgaacac-agagcagggtagggaaggctgaag--agtaat---tt-----ggaag------agcaaaggaaagatgtTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891775 62 - 924385 tgaaccc-agagcagggtagggaaggctgaag--agtaat---tt-----ggaag------agcaaaggaaagatgtTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732796 64 - 10587913 tgaacac-agagcagggtagggaaggctgaagttcgtaat---tt-----ggaag------agcaaaggaaagatgtTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067668 62 - 98464013 tgaacac-agagcagggtaaggaagactgaag--agtaat---tt-----ggaag------agcaaaggaaagatgcct i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552384 62 - 2763108 tgaacac-agagcagtgtaaggaagactgaag--agtaat---tt-----ggaag------agcaaagaaaagatGCCT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276785 60 - 4835464 tgaacac---agcagggtaaggaagactgaag--agtaat---tt-----ggaag------agcaaaggaaagatgcct i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742704 62 + 4093027 tgaacac-agagcagggtaaggaagactgaag--agtaat---tt-----ggaag------agcaaaggaaagatgcct i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 629711 74 + 2414909 ttaacac-agagcagggtggagaaggctgaag--agtAATGTGTT--GGGGGGAGGGGGGCAGCAAAGGAAAGGTGTTC i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 48091 71 + 631505 tgaacac-agagcagggtggagaaggctgaag--agtAATTTGTT-----GGGAGTGGGGCAGCATAGGATAGGCGTTC i eulMac1.LGHX01000499v1 I 590 I 325 s eulFla1.LGHW01000501v1 48297 71 + 635616 tgaacac-agagcagggtggagaaggctgaag--agtAATTTGTT-----GGGAGTGGGGCAGCATAGGATAGGCGTTC i eulFla1.LGHW01000501v1 I 590 I 325 s otoGar3.GL873534 11079478 57 + 30473821 --------------------AGAAGGCTGAGG--AATGATATTTTAGGGGGGGAAGGAGAGTGCAAAGGaaaggctttg i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787314 51 - 149736546 ----------AGCAGGG-AGAGATTGTTGAAT--AGAGAT---TG-----TAGAT------AG-AAAGAAAAAACACTC i mm10.chr6 C 0 C 0 s canFam3.chr20 16614081 50 + 58134056 TGAATAC-AGAGGTGGA------------AAA--ATAAAC---CT-----GGAGG------GGCAAAGGAAAGATGATA i canFam3.chr20 C 0 I 3 s dasNov3.JH563077 1862143 62 - 2187301 tgaacacaaaagccaggtggagaaatttgaag--aat-at---ct-----ggagg------agcaaagaaaagatatcc i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1630165 702 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570001 228 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669355 424 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189736 491 + 958716 I a score=722761.000000 s hg38.chrUn_KI270749v1 125271 51 + 158759 AATGCATAAAgtccactaagtttgggaaacattgggttaaacaaagctaca s panTro5.chr3 202012457 51 - 202621043 AATGCATAAAgtccactaagtttgggaaacattgggttaaacaaagctaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780482 51 - 205426864 AATGCATAAAgtccactaagtttgggaaacattgggttaaacaaagctaca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10458 51 - 17846 AATGCATAAAgtcaactaagtttgggaaacattgggttaaacaaagctaca i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597200 51 + 86207423 AATGCATAAAgtccactaagtttgggaaacattgggttaaacaaagttaca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078439 51 + 204787373 AATGCATTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i rheMac8.chr2 C 0 I 3 s macFas5.chr2 61010287 51 - 192460366 AATGCATTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i macFas5.chr2 C 0 I 3 s macNem1.NW_012018021v1 11122528 51 - 17224310 AATGCATTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i macNem1.NW_012018021v1 C 0 I 3 s cerAty1.NW_012009469v1 17434427 51 - 41321030 aatacaTTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64505997 50 - 101219884 AATGCATTAAGTTCACtaagttt-ggaaacattgggttaaacaaagctaca i chlSab2.chr22 C 0 I 3 s manLeu1.NW_012098965v1 891837 51 - 924385 AATGCATTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6732860 51 - 10587913 AATGCATTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067730 51 - 98464013 aatgcaTCAAGTGCACtaaatttgggaaacattgggttaaacaaagctaca i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552446 51 - 2763108 AATGCATCAAgtccactaaatttgggaaacattgggttaagcaaagctaca i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276845 51 - 4835464 aatgcaTTAAgtccactaaatttgggaaacattgggttaaacaaagctaca i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742766 51 + 4093027 aatacaTCAAGTTCACtaaatttgggaaacattgggttaaacaaagctaca i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1630867 51 - 9149476 AATGCATGAAgtccactaaatttgggaatcattgggttaaacaaagttaaa i micMur3.chr32 I 702 C 0 s proCoq1.NW_012148064v1 629785 51 + 2414909 AATGCATAAAATCCACtaaatttggaaaacattgggttaaataaagttaaa i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11079535 41 + 30473821 ----------gtctaataagttagagaaacattggatttaacaaaactaca i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787365 47 - 149736546 TACATATAAGGTCAACTAGATCTGAGAAACAGAAGGGTACAGCTAGC---- i mm10.chr6 C 0 C 0 s canFam3.chr20 16614134 30 + 58134056 AATGCATAAGGTCAATGAACTTTGAGaaac--------------------- i canFam3.chr20 I 3 C 0 s dasNov3.JH563077 1862205 27 - 2187301 --aacacaAAGTCACCTAAGTTTGGGAAA---------------------- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48368 325 + 635616 I e eulMac1.LGHX01000499v1 48162 325 + 631505 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570001 228 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669355 424 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189736 491 + 958716 I a score=37111.000000 s hg38.chrUn_KI270749v1 125322 2 + 158759 ta s panTro5.chr3 202012508 2 - 202621043 ta i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780533 2 - 205426864 ta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10509 2 - 17846 ta i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597251 2 + 86207423 ta i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078493 2 + 204787373 ta i rheMac8.chr2 I 3 C 0 s macFas5.chr2 61010341 2 - 192460366 ta i macFas5.chr2 I 3 C 0 s macNem1.NW_012018021v1 11122582 2 - 17224310 ta i macNem1.NW_012018021v1 I 3 C 0 s cerAty1.NW_012009469v1 17434481 2 - 41321030 ta i cerAty1.NW_012009469v1 I 3 C 0 s papAnu3.chr2 59570229 2 + 187378091 ta i papAnu3.chr2 I 228 I 288 s chlSab2.chr22 64506050 2 - 101219884 ta i chlSab2.chr22 I 3 C 0 s manLeu1.NW_012098965v1 891891 2 - 924385 ta i manLeu1.NW_012098965v1 I 3 C 0 s colAng1.NW_012114711v1 6732911 2 - 10587913 ta i colAng1.NW_012114711v1 C 0 I 3 s calJac3.chr15 46067781 2 - 98464013 ta i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552497 2 - 2763108 ta i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276896 2 - 4835464 ta i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742817 2 + 4093027 ta i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1630918 2 - 9149476 ta i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 629836 2 + 2414909 ta i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11079576 2 + 30473821 ta i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16614164 1 + 58134056 -a i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862232 1 - 2187301 -A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48368 325 + 635616 I e eulMac1.LGHX01000499v1 48162 325 + 631505 I e mm10.chr6 45787412 0 - 149736546 C e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669355 424 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189736 491 + 958716 I a score=1592921.000000 s hg38.chrUn_KI270749v1 125324 111 + 158759 attttcttttctgcagga---tttctcagatcctttaaatgtgaatgcaaactacaactctccaggaagagggaaaaaatgtgccaagcatgccaaatg--tttaaccacacaacc s panTro5.chr3 202012510 111 - 202621043 attctcttttctgcagga---tttctcagatcctttaaatgtgaatgcaaactataactctccaggaagagggaaaaaatgtgccaagcatgccaaatg--tttaaccacacaacc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780535 111 - 205426864 attttcttttctgcagga---tttctcagatcctttaaatgtgaatgcaaactataactctccaggaagagggaaaaaatgtgccaagcatgccaaatg--tttaaccacacaacc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10511 110 - 17846 attttcttttctgcagga---tttctcagatcctttaaatgtgaatgcaaactataactc-ccaggaagagggaaaaaatgtgccaagcatgccaaatg--tttaatcacacaacc i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597253 111 + 86207423 attttcttctctgcagga---tttctcagatcctttaaatgtgaatgcaaactataactctccaggaagagggagaaaatgtgccaagcatgccaaatg--tttaaccacacaacc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078495 111 + 204787373 attttcttttctgcagga---tttctcagatcctttaaatgtgaataaaaactataactcctcaggaagagggagaaaatgtgccaagcatgccaaatg--tttaaccacacaacc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010343 111 - 192460366 attttcttttctgcagga---tttctcagatcctttaaatgtgaataaaaactataactcctcaggaagagggagaaaatgtgccaagcatgccaaatg--tttaaccacacaacc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122584 111 - 17224310 attttcttttctgcagga---tttctcagatccttttaatgtgaataaaaactataactcctcaggaagagggagaaaatgtgccaagcatgccaaatg--tttaaccacacaacc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434483 111 - 41321030 attttcttttctgcagga---tttctcagatcctttaaatgtgaataaaaactataactccccaagaagagggagaaaatgtgccaagcatgccaaatg--tttaaccacacaacc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506052 111 - 101219884 attttcttttctgcagga---tttctcagatcctttaaatgtgaataaaaactataactccccaggaagaaggagaaaaggtgccaagaatgccaaatg--tttaaccacacaacc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891893 111 - 924385 attttcttttctgcagga---tttctcagatcctttaaatgtgaataaaaactataactccccaggaagagggagaaaatgtgccaagcatgccaaatg--tttaaccacacaacc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732916 111 - 10587913 attttcttttctgcagga---tttctcagatcctttaaatatgaatacaaactataactccccaggaagagggagaaaatgtgccaagcatgccaaatg--tttaatcacacaacc i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46067783 111 - 98464013 attttcttttctgcagga---tttctcagatcctttaaatgtgagtacaaatcataactctcccaaaagagggagaaaatgtgccaaccatgacaaatg--tttaaccacacaacc i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552499 111 - 2763108 attttcttttctgcagta---tttctcagatcctttaaatgtgaatgcaaatcataactctccccaaagagggagaaaatgtgccaagcacgacaaatg--tttaaccatataacc i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276898 111 - 4835464 attttcttttctgcagga---tttctcagatcctttaaatgtgagtgcaaatcataaccctcccgaaagagggagaaaatgtgccaatcatgacaaatg--tttaaccacacaacc i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742819 111 + 4093027 attttcttttctgcagga---tttctcagatcctttaaatgtgggtgcaaatcataactctcccaaaagagggagaaaatgtgccaagcatgacaaatg--tttaaccacacaacc i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1630920 113 - 9149476 attttctctgctgcagga---tttctcagatctttcaaatgctaatgcacattacaactctctagaagaggggagagaatgtgccaagcatgccaaatgtgtttaaccacacaacc i micMur3.chr32 C 0 I 250 s proCoq1.NW_012148064v1 629838 113 + 2414909 attttctctgctgcagga---tttctcagatccttcaaatgctaatgcacattacaactctctagaaggcgggagaaaatctaccaagtatgccagatgtatttaaccacgcaacc i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11079578 116 + 30473821 attttctctgctgcaggatattttctcagatccttgaaatgcgaacacaattgatgattctctaggaggagagagaaaatgtgccaggcacgtccaatgtatttaaccacacaact i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787412 91 - 149736546 -------------AAGGA---CCTCTCAACTTTTTTT-ATGCCAGTGTAAATTATGATTGTCTAGCTTAAGTGTGAAGAAGTACAAGGCACTCC--ATG--CT----CACTGAACC i mm10.chr6 C 0 I 7 s canFam3.chr20 16614165 78 + 58134056 attttccatactgcagga---tttctcacagccttgaaatgctaatatgaattatgactc----------------AGATGT------------AATTA--TT-----ACAGAATC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862233 102 - 2187301 ACTTAtctttctggagga---tttatcagggcctttaaatgctaatgtggattataacttaccag-----------tggtgtgccaaccatgccgaatatttttaactatagaacc i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48368 325 + 635616 I e eulMac1.LGHX01000499v1 48162 325 + 631505 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570231 288 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669355 424 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189736 491 + 958716 I a score=538574.000000 s hg38.chrUn_KI270749v1 125435 49 + 158759 ------tcccattcttgt----------------------agaacaccttaacagactct----tgtcc-catgtgacacac s panTro5.chr3 202012621 49 - 202621043 ------tcccattcttgt----------------------agaacaccttaacagactct----tgtcc-catgtgacacac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780646 49 - 205426864 ------tcccattcttgt----------------------agaacaccttaacagactct----tgtcc-catatgacacac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10621 48 - 17846 ------tcccattcttgt----------------------agaacaccttaacagactc-----tgtcc-catgtgacacac i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597364 49 + 86207423 ------tcccattcttgt----------------------agaacaccttaacagacttt----tgtcc-catgtgacacac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078606 49 + 204787373 ------tcccattcttgt----------------------agaattccttaacagactct----tgtcc-catgtggcacac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010454 49 - 192460366 ------tcccattcttgt----------------------agaattccttaacagactct----tgtcc-catgtggcacac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122695 49 - 17224310 ------tcccattcttgt----------------------agaattccttaacagactct----tgtcc-catgtggcacac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434594 49 - 41321030 ------tcccattcttgt----------------------agaattccttaacagactct----tgtcc-catgtggcacac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506163 49 - 101219884 ------tcccattcttgt----------------------agaactccttaacagactct----tgtcc-catgtggcacac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892004 49 - 924385 ------tcccattcttgt----------------------agaattccttaacagactct----tgtcc-catgtggcacac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733027 49 - 10587913 ------tcccattcttgt----------------------agaactccttaacagactct----tgtcc-catgtggcacac i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067894 49 - 98464013 ------tcccgttcttgt----------------------agaaccccttaacagacttt----tgtgc-catgtaacacac i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552610 49 - 2763108 ------tcccgttcttgt----------------------agaacaccttaacagacttt----tgtcc-catgtgacacac i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277009 49 - 4835464 ------tcccgttcttgt----------------------agaacaccttaacagacttt----tgtcc-catgtgggacac i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742930 49 + 4093027 ------tcccgttcttgt----------------------agaacaccttaatagacctt----tgtcc-catgtgacacac i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 629951 47 + 2414909 ------tcctgttattgt----------------------agaacagcatgagggactct----tagcc-catgagaccc-- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11079694 70 + 30473821 ------tcctgttctcGTCCACACAACTTCCTGTTCTGAAAGATTAATTTGCAGAACATT----TAGCCTCACAACACAC-- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787510 48 - 149736546 ------CCATGTTTTGGT----------------------AGAACT-TTTAAGAGAGGTG----TTTCC-TGTGTCACAACT i mm10.chr6 I 7 C 0 s canFam3.chr20 16614243 51 + 58134056 -------TCTGTTCTTAA---------------------AAAAACACCTTGA--GACTAGGAAATGCCC-CTTGAGTGACAC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862335 55 - 2187301 ttctgttcttgttttcat----------------------ggaacaccttgagtgactaa----tggcc-catggaacacac i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48368 325 + 635616 I e eulMac1.LGHX01000499v1 48162 325 + 631505 I e micMur3.chr32 1631033 250 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570231 288 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669355 424 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189736 491 + 958716 I a score=21021.000000 s hg38.chrUn_KI270749v1 125484 1 + 158759 t s panTro5.chr3 202012670 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780695 1 - 205426864 t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10669 1 - 17846 t i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69669779 1 + 202140232 T i ponAbe2.chr3 I 424 C 0 s nomLeu3.chr21 67597413 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078655 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010503 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122744 1 - 17224310 t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434643 1 - 41321030 t i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506212 1 - 101219884 t i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892053 1 - 924385 t i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733076 1 - 10587913 t i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067943 1 - 98464013 t i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552659 1 - 2763108 t i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277058 1 - 4835464 t i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742979 1 + 4093027 t i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 629998 1 + 2414909 t i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11079764 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787558 1 - 149736546 T i mm10.chr6 C 0 C 0 s canFam3.chr20 16614294 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862390 1 - 2187301 t i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48368 325 + 635616 I e eulMac1.LGHX01000499v1 48162 325 + 631505 I e micMur3.chr32 1631033 250 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570231 288 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 189736 491 + 958716 I a score=11803.000000 s hg38.chrUn_KI270749v1 125485 1 + 158759 C s panTro5.chr3 202012671 1 - 202621043 c i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780696 1 - 205426864 c i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10670 1 - 17846 C i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69669780 1 + 202140232 C i ponAbe2.chr3 C 0 I 2919 s nomLeu3.chr21 67597414 1 + 86207423 c i nomLeu3.chr21 C 0 I 2 s rheMac8.chr2 66078656 1 + 204787373 c i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010504 1 - 192460366 c i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122745 1 - 17224310 c i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434644 1 - 41321030 c i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506213 1 - 101219884 c i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892054 1 - 924385 c i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733077 1 - 10587913 c i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067944 1 - 98464013 c i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552660 1 - 2763108 c i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277059 1 - 4835464 c i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742980 1 + 4093027 c i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 190227 1 + 958716 t i tarSyr2.KE939134v1 I 491 C 0 s proCoq1.NW_012148064v1 629999 1 + 2414909 t i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11079765 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787559 1 - 149736546 T i mm10.chr6 C 0 C 0 s canFam3.chr20 16614295 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862391 1 - 2187301 t i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48368 325 + 635616 I e eulMac1.LGHX01000499v1 48162 325 + 631505 I e micMur3.chr32 1631033 250 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570231 288 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I a score=6863.000000 s hg38.chrUn_KI270749v1 125486 3 + 158759 TAA s panTro5.chr3 202012672 3 - 202621043 tAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780697 3 - 205426864 tAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10671 3 - 17846 TAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597417 3 + 86207423 TAA i nomLeu3.chr21 I 2 C 0 s tarSyr2.KE939134v1 190228 3 + 958716 tgg i tarSyr2.KE939134v1 C 0 I 1905 s proCoq1.NW_012148064v1 630000 3 + 2414909 tgg i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11079766 3 + 30473821 CAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787560 3 - 149736546 TAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16614296 3 + 58134056 TGG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862392 3 - 2187301 tgg i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48368 325 + 635616 I e eulMac1.LGHX01000499v1 48162 325 + 631505 I e micMur3.chr32 1631033 250 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570231 288 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e manLeu1.NW_012098965v1 892055 0 - 924385 C e macNem1.NW_012018021v1 11122746 0 - 17224310 C e rheMac8.chr2 66078657 0 + 204787373 C e aotNan1.NW_018502033v1 3742981 0 + 4093027 C e cebCap1.NW_016107467v1 277060 0 - 4835464 C e saiBol1.JH378290 2552661 0 - 2763108 C e calJac3.chr15 46067945 0 - 98464013 C e colAng1.NW_012114711v1 6733078 0 - 10587913 C e chlSab2.chr22 64506214 0 - 101219884 C e cerAty1.NW_012009469v1 17434645 0 - 41321030 C e macFas5.chr2 61010505 0 - 192460366 C a score=1448436.000000 s hg38.chrUn_KI270749v1 125489 125 + 158759 CATTTTCCAATGTTAGTATCTTGTAAATATTCAGGGTCAACCCATCATACCCCAAGTATTAAATTAATTTTGCCTGAAGAGTT-GGTGTCTTAATTGGTAGAATTAGTATATTCCATTTCTCTAGC s panTro5.chr3 202012675 125 - 202621043 CATTTTCCAATGTTAGTATCTTGTAAATATTCAGGGTCAACCCATCATACCCCAAGTATTAAATTAATTTTGCCTGAAGAGTT-GGTGTCTTAACTGGTAGAATTCATATATTCCATTTCTCTAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780700 125 - 205426864 CATTTTCCAATGTTAGTATCTTGTAAATATTCAGGGTCAACCCATCATACCCCAAGTATTAAATTAATTTTGCCTGAAGAGTT-GTTGTCTTAATTGGTAGAATTCATATATTCCATTTCTCTAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10674 124 - 17846 CATTTTCCAATGTTAGTATCTTGTAAATATTCAGGGTCAACCCATCATACCCCAAGTATTAAATTAATTTTGCCTGAAGAGTT-GGTGT-TTAATTGGTAGAATTCGTATATTCCATTTCTCTAGC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597420 126 + 86207423 CATTTTCCAATGTTAGTATCTTGTAAATATGCAGGGTCAACCCATCATACCCCAAGTATTAAATTAATTTTGCCTGAAAAGTTGGGTGTCTTAATTGGTAGAATTCATATATTCCATTTCTCTAGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078657 124 + 204787373 -tttggaaaaTATTAGTATATTGTAAATATTCAGGGTCAACCCATCTTACCCCAAGTGTTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCATTTCTCTAGC i rheMac8.chr2 C 0 I 2 s macFas5.chr2 61010505 124 - 192460366 -tttggaaaaTATTAGTATATTGTAAATATTCAGGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCATTTCTCTAGC i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11122746 124 - 17224310 -tttggaaaaTATTAGTATATTGTAAATATTCAGGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCATTTCTCTAGC i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17434645 124 - 41321030 -tttggaaaatgttAGTATCTTGTAAATATTCAAGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCATTTCTCTAGC i cerAty1.NW_012009469v1 C 0 I 2 s chlSab2.chr22 64506214 124 - 101219884 -tttggaaaatgttAGTATCTTGTAAATATTCAGGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-AGTGGCTTAATTGATAGAATTCACATATTCCATTTCTCTAGC i chlSab2.chr22 C 0 I 2 s manLeu1.NW_012098965v1 892055 124 - 924385 -tttggaaaatgttAGTATCTTGTAAATATTCAGGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCATTTCTCTAGC i manLeu1.NW_012098965v1 C 0 I 2 s colAng1.NW_012114711v1 6733078 124 - 10587913 -tttggaaaatgttAGTATCTTGTAAATATTCGGGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCGTTTCTCTAGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067945 124 - 98464013 -tttaaaaaacgttgTTGTCTTGTAAATATTCAGGGTCAACCCATGTTACTCCAAGTATTACATTAATTTTTCCTGAAGAGAT-GCTGTCTTAATTGGTAGAATTCATATATTCCATTTCACTAGC i calJac3.chr15 C 0 I 2 s saiBol1.JH378290 2552661 124 - 2763108 -tttgaaaaacgttgTTGTCTTGTAAATATTCGGGGTCAACCCATGTTACTCCAAGTATTAAATTAATTTTGCCTGAAGAGAT-GCTGTCTTAATTGGTAGAATTCATATATTCCATTTCACTAGC i saiBol1.JH378290 C 0 I 2 s cebCap1.NW_016107467v1 277060 124 - 4835464 -tgtgaaaaatgctgTTGTCTTGTAAATATTCAGGGTCAACCCATGTTACTCCAAGTATTAAATTAGTTTTGCCTGAAGAGAG-GCTGTCTTTATTGGTAGATTTCATATATTCCATTTCACTAGC i cebCap1.NW_016107467v1 C 0 I 2 s aotNan1.NW_018502033v1 3742981 124 + 4093027 -tttgaaaaatgttgTTGTCTTGTAAATATTCAGGGTCAACCCATGTTACTCCAAGTATTAAATTAATTTTGCCTGAAGAGAT-GCTGTCTTAATTGGTAGAATTCATATATTCCATTTCATTAGC i aotNan1.NW_018502033v1 C 0 I 2 s proCoq1.NW_012148064v1 630003 108 + 2414909 ------aaaaTCTTGGTCCCTCATAAATATCCAGAGTTAACCAGTTTTACCTCAAATATTAAATCGGTTTTGCCTGAAGAGGG-GCTGTCTTAATTGATAGAGTTCATATATTCC----------- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11079769 119 + 30473821 ------AAAACGTTGGTCCCTCCTAAATATCCAGGGTCCACTAGTTTCACCTCAAGTATTAAATTAGTTTTGCCCCAAAAGAT-GCTTTCTTAATTGGCAGAATTCTTGTATTCCATTTCTCTAGC i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45787563 120 - 149736546 ----AAAAAATGGTGGCTTCTCATGACTTCTATTGATCAAGCAACTTTACTAAACTTTTCGAACTAATATCCCCTAAAATAAT-GTTGTCTTCATGTATAGTCTTAATAT-TCATGTCTCTGCAAC i mm10.chr6 C 0 I 2 s canFam3.chr20 16614299 119 + 58134056 ------AAAATGGCAGATTCTCATAAATATCAAGAGTTAACCAATGTTACCTCAAGTATCAAATTAATTTTGCCTGGAGAGAT-GCTATTTTAATTGGAATGGTTCATATAGTCCACCTCCCTGAA i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1862395 103 - 2187301 ------gaaatgttAAC-TACTGTCAAGAGTCA--ACCAACCAATGGTACCTTATAGATCAAATTAATTTTTCCTGAGTTCAT-GCAGTT-----------AGTTCACATAACCCCCTGCACTG-- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48368 325 + 635616 I e eulMac1.LGHX01000499v1 48162 325 + 631505 I e micMur3.chr32 1631033 250 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570231 288 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=46699.000000 s hg38.chrUn_KI270749v1 125614 2 + 158759 CC s panTro5.chr3 202012800 2 - 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780825 2 - 205426864 TC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10798 2 - 17846 CC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597546 2 + 86207423 CC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078783 2 + 204787373 CC i rheMac8.chr2 I 2 C 0 s macFas5.chr2 61010631 2 - 192460366 CC i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11122872 2 - 17224310 CC i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17434771 2 - 41321030 CC i cerAty1.NW_012009469v1 I 2 C 0 s papAnu3.chr2 59570519 2 + 187378091 CC i papAnu3.chr2 I 288 I 1786 s chlSab2.chr22 64506340 2 - 101219884 CC i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 892181 2 - 924385 CC i manLeu1.NW_012098965v1 I 2 C 0 s colAng1.NW_012114711v1 6733202 2 - 10587913 CC i colAng1.NW_012114711v1 C 0 I 2 s calJac3.chr15 46068071 2 - 98464013 CC i calJac3.chr15 I 2 C 0 s saiBol1.JH378290 2552787 2 - 2763108 CC i saiBol1.JH378290 I 2 C 0 s cebCap1.NW_016107467v1 277186 2 - 4835464 CC i cebCap1.NW_016107467v1 I 2 C 0 s aotNan1.NW_018502033v1 3743107 2 + 4093027 CC i aotNan1.NW_018502033v1 I 2 C 0 s proCoq1.NW_012148064v1 630111 2 + 2414909 CC i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 48487 2 + 631505 CC i eulMac1.LGHX01000499v1 I 325 C 0 s eulFla1.LGHW01000501v1 48693 2 + 635616 CC i eulFla1.LGHW01000501v1 I 325 C 0 s otoGar3.GL873534 11079890 2 + 30473821 CC i otoGar3.GL873534 I 2 C 0 s mm10.chr6 45787685 2 - 149736546 TC i mm10.chr6 I 2 C 0 s canFam3.chr20 16614420 2 + 58134056 CC i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1862498 1 - 2187301 -C i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1631033 250 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=557567.000000 s hg38.chrUn_KI270749v1 125616 32 + 158759 AAATTGTAGAACTTTCAGAGCTTCAAATAATT s panTro5.chr3 202012802 32 - 202621043 AAATTGTAGAACTTTCAGAGCTTCAAATAATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780827 32 - 205426864 AAATTGTAGAACTTTCAGAGCTTCAAATAATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10800 32 - 17846 AAATTGTAGAACTTTCAGAGCTTCAAATAACT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597548 32 + 86207423 Aaattgtagaactttcagagcttcacataatc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078785 32 + 204787373 AAATTGTAGAACTTTCAGAGCTTCAAATAATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010633 32 - 192460366 AAATTGTAGAACTTTCAGAGCTTCAAATAATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122874 32 - 17224310 AAATTGTAGAACTTTCAGAGCTTCAAATAATT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434773 32 - 41321030 AAATTGTAGAACTTTCAGAGCTTCAAATAATT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506342 32 - 101219884 AAATTATAGAACTTTCAGAGCTTCAAATAATT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892183 32 - 924385 Aaattgtagaactttcagagcttcaaataatt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733206 32 - 10587913 Aaattgtagaactttcagagcttcaaataact i colAng1.NW_012114711v1 I 2 C 0 s calJac3.chr15 46068073 32 - 98464013 AAATTATAGAACTTTCAGAGCTTCAAATGATT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552789 32 - 2763108 Aaattatagaactttcagagattcaaatgatc i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277188 32 - 4835464 AAATTGCAGAACTTTCAGAGCTTCAAATGATT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743109 32 + 4093027 AAATTATAGAACTTTCAGAGCTTCAAATGATT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 630113 32 + 2414909 AAATTGCAGAACTTTTAGAGCTCCAAATGATT i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 48489 32 + 631505 AAATTGTAGAACTTTTAGAGCTCCAAATGATT i eulMac1.LGHX01000499v1 C 0 I 44 s eulFla1.LGHW01000501v1 48695 32 + 635616 AAATTGTAGAACTTTTAGAGCTCCAAATGATT i eulFla1.LGHW01000501v1 C 0 I 44 s otoGar3.GL873534 11079892 30 + 30473821 AAATTGTAGAAC-TTTAGAGCTCCAAATGAT- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787687 30 - 149736546 AAGCTGAAAAACTTCTACTGCGTTGAAGGT-- i mm10.chr6 C 0 C 0 s canFam3.chr20 16614422 32 + 58134056 AAATTAGAGAATTCTTTGAGCCCCAAATGACT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862499 32 - 2187301 AAGTATTAGAACTTTTAGAACTACAGATAATT i dasNov3.JH563077 C 0 C 0 e micMur3.chr32 1631033 250 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=322457.000000 s hg38.chrUn_KI270749v1 125648 27 + 158759 CTGGGC-ATTCCTCTACTCTGATGGGTT s panTro5.chr3 202012834 27 - 202621043 CTGGGC-ATTCCTCTACTCTGATGGGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780859 27 - 205426864 CTGGGC-ATTCCTCTACTCTGATGGGTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10832 27 - 17846 CTGGGC-ATTCCTCTACTCTGATGGGTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597580 27 + 86207423 ctgggc-attcctctactctgatgggtt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078817 27 + 204787373 CTGGGC-ATTCCTCTACTCTGATGGGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010665 27 - 192460366 CTGGGC-ATTCCTCTACTCTGATGGGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122906 27 - 17224310 CTGGGC-ATTCCTCTACTCTGATGGGTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434805 27 - 41321030 CTGGGC-ATTCCTCTACTCTGATGGGTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506374 27 - 101219884 CTGGGC-ATTCCTCTACTCTGATGGGTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892215 27 - 924385 ctgggc-attcctctactctgatgggtt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733238 27 - 10587913 ctgggc-attcctctactctgataggtt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068105 27 - 98464013 GTGGGC-ATTTCTCTGCTCTAATGGGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552821 27 - 2763108 gtggac-atttctctgctctaatgggtt i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277220 27 - 4835464 GTGGGC-ATTTCTCTGCTCTAATGGGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743141 27 + 4093027 GTGGGC-ATTTCTCTGCTCTAATGGGTT i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 630145 27 + 2414909 GTGCAC-ATTCATCTAATCCCATAGGTT i proCoq1.NW_012148064v1 C 0 I 17 s otoGar3.GL873534 11079922 25 + 30473821 -TGTGC-ATTCA-CTGCCCTCACGGGTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787717 27 - 149736546 -TAGACTACTCATCCATTTGAATGTGTC i mm10.chr6 C 0 C 0 s canFam3.chr20 16614454 26 + 58134056 ATGAAC-ATTCAACTACTCAGACAGTA- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862531 27 - 2187301 ATTGGT-AGTCATGTACACTGACAATTC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48727 44 + 635616 I e eulMac1.LGHX01000499v1 48521 44 + 631505 I e micMur3.chr32 1631033 250 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=257534.000000 s hg38.chrUn_KI270749v1 125675 14 + 158759 CAATCGGCAGAT-AA s panTro5.chr3 202012861 14 - 202621043 CAATCGGCAGAT-AA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780886 14 - 205426864 CAATCGGCAGAT-AA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10859 14 - 17846 CAATCGGCAGAT-AA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597607 14 + 86207423 caattggcagat-aa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078844 14 + 204787373 CAATTGGCAGAT-AA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010692 14 - 192460366 CAATTGGCAGAT-AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122933 14 - 17224310 CAATTGGCAGAT-AA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434832 14 - 41321030 CAATTGGCAGAT-AA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506401 14 - 101219884 CAATTGGCAGAT-AA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892242 14 - 924385 caattggcagat-aa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733265 14 - 10587913 caattggcagat-aa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068132 14 - 98464013 CAGCTGGCAGAT-CA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552848 14 - 2763108 caattcgcagat-ca i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277247 14 - 4835464 CAATTCATAGAT-CA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743168 14 + 4093027 CAACTGGCAGAT-CA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1631283 14 - 9149476 CAATTGGCAGAT-AC i micMur3.chr32 I 250 C 0 s proCoq1.NW_012148064v1 630189 14 + 2414909 CAATTGGCAGAT-AA i proCoq1.NW_012148064v1 I 17 C 0 s eulMac1.LGHX01000499v1 48565 15 + 631505 CAATTGGCAGATAAA i eulMac1.LGHX01000499v1 I 44 C 0 s eulFla1.LGHW01000501v1 48771 15 + 635616 CAATTGGCAGATAAA i eulFla1.LGHW01000501v1 I 44 C 0 s otoGar3.GL873534 11079947 14 + 30473821 CAACTGGCAGAT-AA i otoGar3.GL873534 C 0 I 416 s mm10.chr6 45787744 14 - 149736546 CCCGAGGCAGAT-AA i mm10.chr6 C 0 C 0 s canFam3.chr20 16614480 14 + 58134056 CAACTGGCAGTC-AA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862558 14 - 2187301 CAATTGGTAGAT-AA i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=770078.000000 s hg38.chrUn_KI270749v1 125689 48 + 158759 AATAATGAAGACATTGAAAAATAAAGTGGCTTGGGCAAAAACGAGAGC s panTro5.chr3 202012875 48 - 202621043 AATAATGAAGACATTGAAAAATAAAGTGGCTTGGGCAAAAACGAGAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780900 48 - 205426864 AATAATGAAGACGTTGAAAAATAAAGTGGCTTGGGCAAAAACGAGAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10873 48 - 17846 AATAATGAAGACATTGAAAAATAAAGTGGCTTGGGCAAAAACGAGAGC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597621 48 + 86207423 aataatgaagacattgaaaaataaagtggcttgggcaaAAACGAGAGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078858 48 + 204787373 AATAATGAAGACATTGGAAAATAAAGTGGCTTGGACAAAAACGAGAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010706 48 - 192460366 AATAATGAAGACATTGGAAAATAAAGTGTCTTGGGCAAAAACGAGAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122947 48 - 17224310 AATAATGAAGACATTGGAAAATAAAGTGGCTTGGACAAAAACGAGAGC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434846 48 - 41321030 AATAATGAAGACATTGGAAAATAAAGTGGCTTGGACAAAAACGAGAGC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506415 48 - 101219884 AATAATGAAGACATTGGAAAATAAAGTGACTTGGATAAAAACGAGAGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892256 48 - 924385 aataatgaagacattggaaaataaagtggcttggacaaaaacgagagc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733279 48 - 10587913 aataatgaagacattggaaaataaagtggcttggacaaAAACGAAAGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068146 48 - 98464013 AATAATGAAGACATTGAAAAATAAAATGGCTTAGTCAAAAAGAAGAGC i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552862 48 - 2763108 aataatgaagacattgaaaaataaaatggcttagtcaaAAAGAAGAGC i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277261 48 - 4835464 AATAATAAAGACATTGAAAAATAATCTGGCTTAGTCAAAAAAAGGAGC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743182 48 + 4093027 AATAATGAAGACATTGAAAAATAAAATGGCTTAGTCAAAAAGAAGAGC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1631297 48 - 9149476 AATAATGAAGACATTGAGATATGAAGTGGCCTGGCCAAAAACCAGAGC i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 630203 48 + 2414909 AATAATGAAGACATTAAGATATGAAGTGGCCTGGCCAAAAACCAGAGC i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 48580 48 + 631505 AATAACGAAGACATTGAGATATGAAGTGGCCTGGCCAAAAACCAGAGC i eulMac1.LGHX01000499v1 C 0 I 2938 s eulFla1.LGHW01000501v1 48786 48 + 635616 AATAACGAAGACATTGAGATATGAAGTGGCCTGGCCAAAAACCAGAGC i eulFla1.LGHW01000501v1 C 0 I 2938 s otoGar3.GL873534 11080377 47 + 30473821 aataaCAGTGGCAATGGGACATGAAATGGCCTGACCAAAAG-CAGAGT i otoGar3.GL873534 I 416 C 0 s mm10.chr6 45787758 45 - 149736546 AACAATGC--ACTTGGAGCAATGTAGCGG-TAAGACCGAAACATGCAC i mm10.chr6 C 0 C 0 s canFam3.chr20 16614494 48 + 58134056 TATAATGGAGACTTTTAGAAATGGAGACATCTGGCCAAACACCAGAGG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862572 34 - 2187301 CAGAATGGAGGCTTTCAGAAAGGAAATGACCTGA-------------- i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=33360.000000 s hg38.chrUn_KI270749v1 125737 2 + 158759 TA s panTro5.chr3 202012923 2 - 202621043 TA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780948 2 - 205426864 TA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10921 2 - 17846 TA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597669 2 + 86207423 TA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078906 2 + 204787373 TA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010754 2 - 192460366 TA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122995 2 - 17224310 TA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434894 2 - 41321030 TA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506463 2 - 101219884 TA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892304 2 - 924385 ta i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733327 2 - 10587913 TA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068194 2 - 98464013 TA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552910 2 - 2763108 TA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277309 2 - 4835464 TA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743230 2 + 4093027 TA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1631345 2 - 9149476 TA i micMur3.chr32 C 0 I 112 s proCoq1.NW_012148064v1 630251 2 + 2414909 TA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11080424 2 + 30473821 TG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787803 1 - 149736546 -A i mm10.chr6 C 0 I 1 s canFam3.chr20 16614542 2 + 58134056 TA i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I e dasNov3.JH563077 1862606 0 - 2187301 C a score=154261.000000 s hg38.chrUn_KI270749v1 125739 15 + 158759 TTCCTCTTGCACCAA s panTro5.chr3 202012925 15 - 202621043 TTCCTCTTGCACCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780950 15 - 205426864 TTTCTCTTGCACCAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10923 15 - 17846 TTCCTCTTGCACCAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597671 15 + 86207423 TTCCTCTTGCACCAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078908 15 + 204787373 TTCCTCTTGCACCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010756 15 - 192460366 TTCCTCTTGCACCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122997 15 - 17224310 TTCCTCTTGCACCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434896 15 - 41321030 TTCCTCTTGCACCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506465 15 - 101219884 TTCCTCTTGCACCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892306 15 - 924385 ttcctcttgcaccaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733329 15 - 10587913 TTTCTCTTGCACCAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068196 15 - 98464013 GGGCCCTTACATCAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552912 15 - 2763108 TGCCCCTTACATCAA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277311 15 - 4835464 GGCCCCTTACATCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743232 15 + 4093027 GGTCTCTTACATCAA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 630253 15 + 2414909 GTTCTCTCACACCAA i proCoq1.NW_012148064v1 C 0 I 117 s otoGar3.GL873534 11080426 15 + 30473821 GTTCTTTCACACCAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787805 13 - 149736546 TACCCATTCCAAC-- i mm10.chr6 I 1 C 0 s canFam3.chr20 16614544 15 + 58134056 ATACTTTCACACCAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862606 3 - 2187301 ------------CAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e micMur3.chr32 1631347 112 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=1338256.000000 s hg38.chrUn_KI270749v1 125754 122 + 158759 AATTTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACAATGGAGTTTTT-AAAACCAGAGTCAGAAATTAATGCACACACAGTTAATATAG s panTro5.chr3 202012940 122 - 202621043 AATTTAGAATTTTAACATGAGTCTCTAAACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACAATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACACACAGTTAATATAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780965 122 - 205426864 AATTTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACAATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACACACAGTTAATATAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10938 122 - 17846 AATTTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACCATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACACACAGTTAATACAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597686 122 + 86207423 AATTTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACAATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACACACAGTTAATACAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078923 122 + 204787373 AATCTAGAATTTTAAAATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACATGATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010771 122 - 192460366 AATCTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACATGATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11123012 122 - 17224310 AATCTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACATGATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434911 120 - 41321030 AATCTAGAATTTTAACATGAG--TCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACATGATGGAGCTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506480 122 - 101219884 AATTTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACGATGGTGTTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892321 122 - 924385 aatctagaattttaacatgagtctctagactc-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACATGATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733344 122 - 10587913 AATTTACAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACGATGGAGTTTTT-AAAACCAGATTCAGATATTAATACACAAACAGTTAATATAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068211 112 - 98464013 AATTTAGAATTTTAACATGAGTCTCTAGACTT-GGTTCTACAACTTTCC---A-----AACT---ATCA--TGTTTAGAATACAAT----TTTTT-CAAACCAGATTCAGAAATTA------ATATAGTTAATATAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552927 117 - 2763108 AATTTAGAATTTTAACATGAGTCTCTAGACTT-GGTCCTACAACTTTCC---A-----AACT---ATCC--GGTTTAGAACACAG-----TTTTT-CAAACCAGATTCAGAAATTAAGGCACACACAGTTAATATAG i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277326 118 - 4835464 AATTTAGAATTTTAACATGAGTCTCTAGACTT-GGTCCTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAGCACAAT----TTTTT-CAAACCAGATTCAGAAATTAAGGAACACATAGTTAATATAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743247 118 + 4093027 AATTTAGAATTTTAACATGAGTCTCTAGACTT-GGTCCTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACAAT----TTTTT-CAAACCAGATTCAGAAATTAAGGCACACACAGTTAACATAG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11080441 106 + 30473821 ---------------------TCCCCAGACTT-GGTCTTACCAATTCCCTCTA-----GTTTGTAATCA--AGTTTAGACCACTACAGAGTTTTT--AAACCAGTTCCAGAGATGAATGCACATATAGTCCGTATAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787818 85 - 149736546 ------------------------CTCCACTCAGGGCATCCCACTCTCC----------ACT---AGTACTGATTCAG--------------TTT-AGGATAAAATCCAGAAACCAGTGCCAATGTAGTTCACACCA i mm10.chr6 C 0 C 0 s canFam3.chr20 16614559 106 + 58134056 ---------------------TCTCTAAACTT-AAACTTGCTACTTTCC---ACTTGTATTT---ATCA--AGTGTAGAACACTGTGGAGTTTTT-AAAACTAGATGCAGAAACTAATACATACATAGTTCACGCAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862609 120 - 2187301 AAACCAGTACTTTCACACCAGTCGCTAAA-TT-GGGCTGGCTACTTCCC---ACTTGTATCT---ATCA--GGTTTAGAAAAC--TGGAGTTTTTAAAAAACAGATTAAAAAACAAATACATA-----TTCAAAGAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 630268 117 + 2414909 I e micMur3.chr32 1631347 112 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=201053.000000 s hg38.chrUn_KI270749v1 125876 14 + 158759 GTAGATGGTACATC s panTro5.chr3 202013062 14 - 202621043 GTAGATGGTACATC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204781087 14 - 205426864 GTAGATGGTACATC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 11060 14 - 17846 GTAGATGGTACATC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597808 14 + 86207423 GTAGATGGTACATC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66079045 14 + 204787373 GTAGATGGTACATC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010893 14 - 192460366 GTAGATGGTACATC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11123134 14 - 17224310 GTAGATGGTACATC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17435031 14 - 41321030 GTAGATGGTACATC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506602 14 - 101219884 GTAGATGGTACATC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892443 14 - 924385 GTAGATGGTACATC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733466 14 - 10587913 GTAGATGGTACATC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068323 14 - 98464013 GTAGATGGTACACC i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2553044 14 - 2763108 GCAGATGGTATACC i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277444 14 - 4835464 GCAGATGGTACACC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743365 14 + 4093027 GCAGATGATGCACC i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1631459 14 - 9149476 GTAGATGGTATATC i micMur3.chr32 I 112 C 0 s otoGar3.GL873534 11080547 12 + 30473821 GTAGAT--TCTATC i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45787903 14 - 149736546 GTAGATATTTTATT i mm10.chr6 C 0 C 0 s canFam3.chr20 16614665 13 + 58134056 GTAGATGGC-CATC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862729 14 - 2187301 ATAGCTGGTACATC i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 630268 117 + 2414909 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=1157625.000000 s hg38.chrUn_KI270749v1 125890 72 + 158759 CTATTTTCTGCACTGCTAAGATA-TCCACTAGGCCTATATTACTTCCATCAGAAGCAAATAAACTTG-CCCTTT s panTro5.chr3 202013076 72 - 202621043 CTATTTTCTGCACTGCTAAGATA-TCCACTAGGCCTATATTACTTCTATCAGAAGCAAATAAATTTG-CCCTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204781101 72 - 205426864 CTATTTCCCGCACTGCTAAGACA-TCCACTAGGCCTATATTACTTCCATCAGAAGCAAATACATTTG-CCCTCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 11074 72 - 17846 CTATTTTCTGCACTGCTAAGATA-TCCACTAGGCCTATATTACTTCCATCAGAAGCAAATAAATTTG-CCCTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597822 72 + 86207423 CTATTTTCTGCACTGCTAAGATA-TCCACTAGGCCTATATTACTTCTATCAGAAGCAAATAAATTTG-CCCTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66079059 72 + 204787373 CTATTTTCTGCACTGCTAAGATA-TCGACTAGCCCTATATTACTTCTATCGGAAGCAAATAAATTTG-CCCTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010907 72 - 192460366 CTATTTTCTGCACTGCTAAGATA-TCGACTAGCCCTATATTACTTCTATCGGAAGCAAATAAATTTG-CCCTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11123148 72 - 17224310 CTATTTTCTGCACTGCTAAGATA-TCGACTAGCCCTATATTACTTCTATCGGAAGCAAATAAATTTG-CCCTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17435045 72 - 41321030 CTATTTTCTGCACTGCTAAGATA-TCAACTAGCCCTATATTACTTCTATCGGAAGCAAATAAATTTG-TCCTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506616 72 - 101219884 CTATTTTCTGCACTGCTAAGATA-TCGACTAGGCCTATATTACTTCTATCGGAAGCAAATAAATTTT-CCCTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892457 72 - 924385 CTATTTTCTGCACTGCTAAGATA-TGGACTAGCCCTATATTACTTCTATCGGAAGCAAATAAATTTG-CCCTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733480 72 - 10587913 CTATTTTCTGCACTGCTAAGATA-TTGACTAGGCCTATATTACTTCTATCGGAAGCAAATAAATTTG-CCCTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068337 72 - 98464013 CTATTTTCTGCACTGCTAAGATT-TTGACTAGGCCTATATTACTTCTGTGGGAAGCAAATGAATTTG-CCCTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2553058 72 - 2763108 CTGTTTTCTGCACTGCTAAGATT-TTGACCAGGCCTATATTATTTCTATGGGAGGCAAATGAATTTG-CCCTTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277458 72 - 4835464 CTATTTTCTGCACTGCTAAGATT-TTGACTAGGCCTATATTACTTCTATGGGAAGCAAATGAATTTT-CCCTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743379 72 + 4093027 CTATTTTCTGCACTGCTAAGATT-TTGACTAGGCCTATATTACTTCTATGGGAAGCAAATGAATTTG-CCCTTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1631473 73 - 9149476 CTATTTTCTGCACTTCTAAGATT-TTGACTAGGCCTCTATTACTTCCGTGGGAAGCAAATAAATTTGCCCCTTT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 630385 72 + 2414909 CTATTTTCTGCACTGCTAAGATT-CTGACTAGGCCTATATTACTTCCATGGAAAGCAAATAAATTTG-CCCTTT i proCoq1.NW_012148064v1 I 117 C 0 s otoGar3.GL873534 11080561 72 + 30473821 CTATTCTCCGCACTGGTAAGACT-TTGACTAGGCCTATATTACTTCTACAGCAAGTAAACACATTCG-CCTTTT i otoGar3.GL873534 I 2 C 0 s mm10.chr6 45787917 71 - 149736546 CTTCTTGAGGTCATGCTAAGAGGCTTGTCTAGGCCTATACTACTTCTATGGGAAACACATTAGCT---GTTTTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16614678 72 + 58134056 CCATTTGCCTCACTGCAAAGATT-TTGACTAGGCCTATATTACTTCTATTAGAAGCAAATGAATTTG-CCCTTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862743 73 - 2187301 ACATTTGCTTCTTTGCTAAGATTTTTGACTAGGCCCATGTTACTTTTAAGGAACACAAATGAATTTG-CCCTTC i dasNov3.JH563077 C 0 I 7153 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=949813.000000 s hg38.chrUn_KI270749v1 125962 68 + 158759 TCATAACCCAAAAGTAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCACCCAA----------------CTTGATTTT-------TTT s panTro5.chr3 202013148 68 - 202621043 TCATAACCCAAAAGTAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCACCCAA----------------CTTGATTTT-------TTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204781173 68 - 205426864 TCATAACCCAAAAGTAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCACCCAA----------------CTTGATTTT-------TTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 11146 67 - 17846 TCATAACCCAAAAGTAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCACCCAA----------------CTTGA-TTT-------TTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597894 60 + 86207423 TCATAACCCAAAAGTAGAATTCAA--------TGCCCTCAAAATTGGTTCACCCAA----------------CTTGATTTT-------TTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66079131 68 + 204787373 TCAGAACTCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAA----------------CTTGATTAT-------TTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010979 68 - 192460366 TCAGAACTCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAA----------------CTTGATTAT-------TTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11123220 68 - 17224310 TCAGAACTCAAAGTTAGAATTAAAGAATTTATTGCCCTCAAAATTGGTTCACCCAA----------------CTTGATTAT-------TTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17435117 68 - 41321030 TCAGAACTCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAA----------------CTTGATTAT-------TTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506688 68 - 101219884 TCAGAAATCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAA----------------CTTGATTAT-------TTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892529 68 - 924385 TCAGAACTCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAA----------------CTTGATTAT-------TTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733552 68 - 10587913 TCAGAACTCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAA----------------CTTGATTGT-------TTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068409 65 - 98464013 TCTTAACTCAAAG-TAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCTTCCAA----------------CTTGA--CT-------TTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2553130 67 - 2763108 TCTTAACTCAAAG-TAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCTTCCAA----------------CTTGATTTT-------TTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277530 67 - 4835464 ACTTAACTCAAAG-TAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCTTCCAA----------------CTTGATTTT-------TTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743451 67 + 4093027 TCTTAACTCAAAG-TAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCTTCCAA----------------CTTGATTTT-------TTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1631546 71 - 9149476 TCATAACTCAAAG-TAGAATCCAATAATTCATTGCCTTCAAAATTGGTTCTCCCAA------------ttttttttttttt-------ttt i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 630457 71 + 2414909 TCATAACTCAAAG-TAGAATCGAAGAATTCATTGCCTTCAAAATTGGTTCTCCCAA------------ttttttttttttt-------ttt i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11080633 83 + 30473821 CTGTAACTCAAGG-TAGAATTCAGGAATTCGTTCCCTTCATAATTGGTTCTCCCTATTTGAtttttttttttttttttttt-------ttt i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787988 74 - 149736546 TTGCAACTCAGAG-TAGAATTTGAGAATTCATTGCCCTCAAAATGCATTTTCTCAT----------------TTTTTCTCTCACACTCTTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16614750 67 + 58134056 TCACAACTCAATG-TGGAATTCAAGAATTCACTGCTCTCAAAATTGGTTCTCACAA----------------TTTGACTTT-------TTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1869969 67 - 2187301 TCTTAACTCAATA-TAGAATTGACTATTATATGGACCTCAAAATTGGTTATCCCAA----------------TTTGATTTT-------TTC i dasNov3.JH563077 I 7153 I 206 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=5998660.000000 s hg38.chrUn_KI270749v1 126030 324 + 158759 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAACACAGAGTGTTGTGCAAGTGGGCTTGCCCTTGGTAACAGACGCAGCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACAGCAGGCAGAACTGTACAAAGGACAGTCACCTTCAACTGTCACTTAGGAAGAAACAAAGATATCAGGAACAGTACCA--TTTTTCCAAATATTTCCAGGCTACAGTTGCATTCGGTGCCTTTCCAGAACAACTGAACAATGAAATGGATAGTAATCTGCCAAATGCATACAGCTGTATGCCTGTTT s panTro5.chr3 202013216 324 - 202621043 CT-----GTAAAACTGGGTTCTAAATAAAGTTATCAGTATATAAA-TGAACACAGAgtgttatgcaggtgggcttgcccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacggcaggcagaactgtacaaaggaaagtcaccttcaactgtcacttaggaagaaacaaagATATCAGGAACAGTACCA--TTTTTCCAAATGTTTCCAGGCTACAGTTGCATTTGGTGCCTTTCCAGAACAACTGAACAATGAAATGGATAGTAATCTGCCAAATGCATACAGCTGTATGCCTGTTT i panTro5.chr3 C 0 I 1 s panPan2.chr3 204781241 324 - 205426864 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAACACAGAgtgttgtgcaggtgggcttgcccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaatggcaggcagaactgtacaaaggaaagtcaccttcaactgtcacttaggaagaaacaaagATATCAGGAACAGTACCA--TTTTTCCTAATGTTTCCAGGCTACAGTTGCATTCGGTGCCTTTCCAGAACAACTGAACAATGAAATGGATAGTAATCTGCCAAATGCATACAGCTGTATGCCTGTTT i panPan2.chr3 C 0 I 1 s gorGor5.CYUI01007532v1 11213 324 - 17846 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAACACAGAgtgttgtgcaagtgggcttgcccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacagcaggcagaactgtacaaaggaaagtcaccttcaactgtcactcaggaagaaacaaagATATCAGGAACAGTACCA--TTTTTCCAAATGTTTCCAGGCTACAGTTGCATTCGGTGCCGTTCCAGAACAACTGAACAATGAAATGGATAGTAATCTGCCAAATGCATACAGCTGTATGCCTGTTT i gorGor5.CYUI01007532v1 C 0 I 1 s nomLeu3.chr21 67597954 324 + 86207423 TT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAACACAGAGTGTTGTGCAGGTGGGCTTGCCCTTGGTAACAGACACAGCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAGGCAGAACTGTACAAAGGAAAGTCACCTTCAACTCTCACTCAGGAAGAAACAAAGATATCATGAACAGTATCA--TTTTTCCAAATGTTTCCAGGCTAAAGTTGCATTCGGTGCCTTTCCAGAACCACTGAACAATGAAACCGGCAGTAATCTGCCAAATGCATACAGCTGTGTGCCTGTTT i nomLeu3.chr21 C 0 I 1 s rheMac8.chr2 66079199 324 + 204787373 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATACAAA-TGAATGCAGAGTGTTGCGCAGGTGGGCTTGCCCTTGGTAACAGACACACCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAAGCAGAATTGTACAAAGGAAAGTCACCTTCAACTGTCACTAAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAACTACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61011047 324 - 192460366 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAATGCAGAGTGTTGCGCAGGTGGGCTTGCCCTTGGTAACAGACACACCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAAGCAGAATTGTACAAAGGAAAGTCACCTTCAACTGTCACTAAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAACCACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTT i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11123288 324 - 17224310 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAATGCAGAGTGTTGCGCAGGTGGGCTTGCCCTTGGTAACAGACACACCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAAGCAGAATTGTACAAAGGAAAGTCACCTTCAACTGTCACTAAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAACCACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTT i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17435185 324 - 41321030 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAATGCAGAGTGTTGCGCAGGTGGGCTTGCCCTTGGTAACAGACACACCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAAGCAGAATTGTACAAAGGAAAGTCACCTTCAACTGTCACTAAGGAAGAAACAAAGATATCATGAATAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCAGTGCCTTTCCAGAACCACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTT i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64506756 324 - 101219884 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAATGCAGAGTGTTGCACAGGTGGGCTTGCCCTTGGTAACAGACACACCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAAGCAGAATTGTACAAAGGAAAGTCACCTTCAACTGTCACTAAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAACCACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 892597 324 - 924385 CT-----GTAAAACTGGGTTGTAAAtaaagttctcagtatataaa-tgaatgcagagtgttgcgcaggtggacttgcccttggtaacagacacacctgtgcctatcaaacac-aaa-acatggtatttaattttggaaaattgctaatggcaagcagaattgtacaaaggaaagtcaccttcaactgtcactaaggaagaaacaaagATATCATGAACAGTATTA--TTTTTCCAAACGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAACCACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTT i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6733620 324 - 10587913 CT-----GTAAAACTGGGTTCTAAAtaaagttctcagtatataaa-tggatgcagagtgttgcgcaggtgggcttgcccttggtaacagacacacctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacggcaagcagaattgtacaaaggaaagttaccttcaactgtcactcaggaagaaacaaagATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAATCACTGAACAATGAAATGGGTAGTAATCTGCCAAACACATACAGTTGTGTGCCTGTTT i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46068474 320 - 98464013 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAA--CAGAGTGTTGTGCAGGTGGGTTTGCCCTTGGTA--GGGCACAGCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAGGCAGAATTATACAAAAGAAAGTCACCTTCAACTGTCACTCAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCCTTCCAGAACCACTGAACAATGAAATGGGTAGTAATCTGCCAAATGCATACAGCTGTGTGCCTGTTT i calJac3.chr15 C 0 I 1 s saiBol1.JH378290 2553197 322 - 2763108 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAA--CAGAGTGTTGTGCAGGTGGGTTTGCCCTTGGTAACAGACACAGCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAGGCAGAATTATACAAAAGAAAGTCACCTTCAACTGTCACCCAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCGGGCTAGAGTTGCATTCGTTGCCCTTCCAGAACCACTGAACAATGAAATAGGTAGTCATCTGCCAAATGCATACAGCTGTGTGCCCGTTT i saiBol1.JH378290 C 0 I 1 s cebCap1.NW_016107467v1 277597 313 - 4835464 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAA--CAAAgtgttgtgcaggtgggtttgcccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacggcaggcagaattatacaaaagaaagtcaccttcaactgtcactcaggaagaaacaaagATATCATGAACAGTATTA--TTTTCCCAAACATTTCCAG---------GCATTAGGTGCCTTTCCAGAACCACTCAACAATGAAATGGGTAGTAATCTGCCAAATGCATACAGCTGTGTGCCTGTTT i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3743518 322 + 4093027 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAA--CAGAgtgttgtgcaggtgggtttgcccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacggcaggcagaattatacaaaagaaagtcaccttcaactgtcactcaggaagaaacaaagCTATCATGAACAATATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGTCCTTCCAGAACCACTGAACAATGAAATGGGTAGTAATCTGCCAAATGCATACAGCTGTGTGCCTGTTT i aotNan1.NW_018502033v1 C 0 I 1 s micMur3.chr32 1631617 324 - 9149476 tt-----GTCAAACTGGGTTCTAAATAAAGTTCTCAGTACATAAA-TGAACACAGAgtgttgtgcaggtgggtttgcccttggtaacagacacagctgtgcctatcaaacgc-gaa-atatggtatttaattttggaaaattgctaacggcaggcaggatcgtacaagagaaagtcaccttcaactgtcactcaggaagaaacaaagATATCATGAACAGTGTTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGTCCTTCCAGAACTACTGAACAATGAAATGGGTAGCTATTTGCCAAGCACATACAGCTGTGTGTCTGTTT i micMur3.chr32 C 0 I 163 s proCoq1.NW_012148064v1 630528 324 + 2414909 tt-----GTGAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAACACAGAgtgttgtgcaggtgggtttgtccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacggcaggcaggatcgtacaagggaaagtcaccttcaactgtcactcaggaaaaaacaaagATATCATGAACAGTGTTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTCCATTCGGTGCCCTTCCAGAACCACTGAACAATGAAATGGGTAGCTATTTGCCAAGCACATACAGCTGTGTGTCTGTTT i proCoq1.NW_012148064v1 C 0 I 1 s otoGar3.GL873534 11080716 324 + 30473821 tt-----GCAAAACTGGGTTCTAAATAAAGTTCTCAGAATATAAA-TGAACACAGAGTGTCGTGCAGGTGGGTTTGTCCTTGGTAACAGACACAGCTGTGCCTATCAAACGC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAGGCGGGATTGTACAAGGGAAAGTCACCTTCAACTGTCACTCAGGAAGAAACAAAGATATCATGAGCAGGACTA--TTTTTCCAAATGTTCCCGGGCTAGAGTTGCACTGGGTGCCCTTCCAGAAGCACTGAACAATGAAATGGGGAGTTATCTGCCAAGCACATACAGCTGTGTGTCTGTTT i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45788062 324 - 149736546 TT-----GTAAAACTTGGTTCCAAATAAAGTGTTCAGTATATAGA-TGATCACAGAGTGCCGTGCAGGTGGATTTGCCCTTGGTACCAGACACAGCTGTGCCTATTAAATAC-AAA-ATATGGTATTTAATTTGGGAAAATTGCTAACGGCAGGCAGGATTGTGCAAGGGAAAGTCACCTTCAACTGTCAGTCAGAACAAGACAAAGATGTCATGAACAGAAGTG--TTTTTCCAAATGTTTCTGTGCTACAATTGCGTTTGGTGGCTTTTCAGAGGCACTGAACAATGAAATGGGTAGCAATTTGCCAAGCACATACAGCTGTGTGTCTGTTT i mm10.chr6 C 0 I 1 s canFam3.chr20 16614817 328 + 58134056 TTCCATACTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAACACAGAGTGCTGTGCAGGTGGGTTTGCCCTTGGTA--AGACACAGCTGTGCCTATCAAATACAAAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAGGCAGGACTGTATGAGGGAAAGTCACCTTTAACTGTCAATCAGGAAGAAACAAAGATATCAGGAACAGGATTA--GTTTTCCGAATGCTTCCAGGCTAGAACTGCATCCGATGCCCTTCCAGAAGCACTGAACAATGAAATGGGTAGCTAGTTGCCAAGCACATACAGCTGTGTGTCTATTT i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1870242 327 - 2187301 CC-----ATAAAACTGGGTTCTAAATAAAGTCCTCAGTAAAAAAACTGAACTTGGATTGCTATGCAGGTGGGTTTGTGCTTGGTAACAGACTCAGCTGTGCCTATCAAACCC-AGATGTATGGTACTTAATTTTGGAATATTGCTAGCAGCAAACAGGATTTTACAAGGGAAAGGCACCTTCAACTGTCACTCAGGAAGAAACAAATATACCATGAACAGTATTATTTTTTTCCAAATGTTTTCAGGCAAAAGTTGTATCCCATGTCCTTCCAAAACCACTGAACAATGAAATGGGTAGTTAT-TGGGAAGCACATACAGCTGTGTGTCAGTTT i dasNov3.JH563077 I 206 I 1 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=1008658.000000 s hg38.chrUn_KI270749v1 126354 72 + 158759 CCTGGGG---TTTATATTAGGGCCT-GGGGAAACA--AAGTTAAGGAAGTAAGGCTGCAGGGTAGCATCAGTCCATCC s panTro5.chr3 202013541 72 - 202621043 CCTGGGG---TTTATATTAGGGCCT-GGGGAAACA--AAGCTAAGGAAGTAAGGCTGCAGGGTAGCATCAGTCCATCC i panTro5.chr3 I 1 C 0 s panPan2.chr3 204781566 72 - 205426864 CCTGGGG---TTTATATTAGGGCCT-GGGGAAACA--AAGTTAAGGAAGTAAGGCTGCAGGGTAGCATCAGTCCATCC i panPan2.chr3 I 1 C 0 s gorGor5.CYUI01007532v1 11538 72 - 17846 CCTGGGG---TTTATATTAGGGCCT-GGGGAAACA--AAGTTAAGGAAGTAAGGCTGCAGGGTAGCATCAGTCCATCC i gorGor5.CYUI01007532v1 I 1 C 0 s nomLeu3.chr21 67598279 72 + 86207423 CCTGGGG---TTTATATTAGGGCCT-GGGGAAACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCATCAGTCCATCC i nomLeu3.chr21 I 1 C 0 s rheMac8.chr2 66079524 72 + 204787373 CCTGGGG---TGTATATTAGGGCCT-GCAAAAACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCC i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61011372 72 - 192460366 CCTGGGG---TGTATATTAGGGCCT-GCGAAAACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCC i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11123613 72 - 17224310 CCTGGGG---TGTATATTAGGGCCT-GCGAAAACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCC i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17435510 72 - 41321030 CCTGGGG---TGTATATTAGGGCCT-GCGAAAACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCC i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64507081 72 - 101219884 CCTGGGG---TGTATATTAGGGCCT-GCGAAAACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCC i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 892922 72 - 924385 CCTGGGG---TGTATATTAGGGCCT-GCGAAAACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCC i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6733945 72 - 10587913 CCTGGGG---TGTATATTAGGGCCT-GGGAAAACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCC i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46068795 72 - 98464013 CCTGGGG---TGTATATTGGGGCCT-GGGGAAACA--AAGTTGGAGAAGTAAGGCTCCAAGGTAGTGTCATTCCATCC i calJac3.chr15 I 1 C 0 s saiBol1.JH378290 2553520 72 - 2763108 CCTGGGG---TGTTTATTGGGGCCT-GGGGAAACA--AAGTTAGGGAAGTAAGGCTCCAAGGTAGTGTCAGTCCATCC i saiBol1.JH378290 I 1 C 0 s cebCap1.NW_016107467v1 277911 72 - 4835464 CCTGGGG---TGTATATTGGGGCCT-GGGGAAAGA--AAGTTAGGGAAGTAAGGCTCCAAGGTAGTTTCAGTTCACTC i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3743841 72 + 4093027 CCTGGGG---TGTATATTGGGGCCT-GGGGAAACA--AAGTTAGGGAAGTAAGGCTCCAAGGTAGTGTCAGCCCATCC i aotNan1.NW_018502033v1 I 1 C 0 s proCoq1.NW_012148064v1 630853 73 + 2414909 CCTGGGG---TGTATGTTGGGGGCTGGGGGAAATG--AAGTTAGGGAAGTAAGGATCGAGAGTATTGTCAGCCCATCC i proCoq1.NW_012148064v1 I 1 I 104 s otoGar3.GL873534 11081041 73 + 30473821 CCTGGGG---TGTACGTTGGGGGCTGGGGGAAAGG--GAGCTCAGGAGGTAAAGATGGGGGGTAGTGTCAGCCCACTC i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45788387 73 - 149736546 CCTGGAG---TGTGAGTTGGGGGCTTGAGGAAATG--GGGTTAGAGAAACAAGGATGATGGCTATCACCAGCTCATCT i mm10.chr6 I 1 C 0 s canFam3.chr20 16615146 77 + 58134056 CCGGGGGGTTTGTGTTTTGGGGTCT-GAGAAAAAATGAGGTTGGGGAAGTAAGCATTGAAAGTAGCGTCAGCCCATCA i canFam3.chr20 I 1 I 3 s dasNov3.JH563077 1870570 71 - 2187301 CCTGGGG---TGT--GTTGGGGACTGGGGGTAATG--AGGTTAGCAAAGTGAGGATTGAAGGTAGTTTCAGTCCATCC i dasNov3.JH563077 I 1 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e micMur3.chr32 1631941 163 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=1037780.000000 s hg38.chrUn_KI270749v1 126426 99 + 158759 ACTATAGTCCGATTCAGATTCAGATGGTCAGATTGGACTCTAAAGTGGAATTCCTAGTATAATACAGTCTTCACTT-CCT-TACAATATGGTTCCTGG-TTT s panTro5.chr3 202013613 99 - 202621043 ACTATAGACCGATTCAGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCCTAGTATAATACAGTCTTCACTT-CCT-TACAATGTGGTTCCTGG-TTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204781638 99 - 205426864 ACTATAGCCCAATTCAGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCCTAGTATAATACAGTCTTCACTT-CCT-TACAATGTTGTTCCTGG-TTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 11610 99 - 17846 ACTATAGTCCGATTCAGATTCAGATGGTCAGATTGGACTCTAAAGTGGAATTCCTAGCATAATACAGTCTTCACTT-CCT-TACAATGTGGTTCCTGG-TTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67598351 99 + 86207423 ACTATAGTCCGATTCAGATTCAGATGGTCAGATTGGACTCTACGGTGGAATTCCTAGTATAATATGGTCTTCACTT-CCT-TACAATGGGGTTCCTGG-TTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66079596 99 + 204787373 ACTATAGTCCGATTCGGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCCTGG-TTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61011444 99 - 192460366 ACTATAGTCCGATTCGGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCCTGG-TTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11123685 99 - 17224310 ACTATAGTCCGATTCGGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCCTGG-TTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17435582 99 - 41321030 ACTATAGTCCGATTCGGATTCAGATGGTCAGATTGGACTCTAAGGTGGCATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCCTGG-TTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64507153 99 - 101219884 ACTATAGTCCGATTCGGATTCAGATGGTCAGATTAGACTCTAAGGTGGAATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCCTGG-TTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892994 98 - 924385 TCTATAGTCCGATTCGGATTCAGATAGTCAGATTGGACTCTAAGGTGGAATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCCTGG--TT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6734017 99 - 10587913 ACTACAGTCCAATTCGGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCCTAGTATAATGCAGTCTTTGCTT-CCA-TACAATGTGATTCCTGG-TTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068867 99 - 98464013 ACTATAGACTGATGTAGATTCAGACAGTCAGAATGGACTCTAAGGAGGAACTCATATTATAATACAGTCTTTACTT-CCT-TACACTGTGGTTCCTGA-TTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2553592 100 - 2763108 ACTATAGACTGATGCAGATTCAGATGGTCAGAATGGATTCTAAGGAGGACCTCATATTATAATACAGTCTTTACTT-CCT-TACACTGTGGTTCCTGATTTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277983 99 - 4835464 ACCATAGGCTGATGCAGACTCAGATGGTCACACTGGATTCTAAGGAGGAACTCATATTATAATACAGTCTTTACTT-CCT-TACATTGTGTTTCCTGA-TTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743913 99 + 4093027 ACTATGGACTGATGCAGATTCAGATGGTCAGAATGGACTCTAAGGAGGAACTCGTATTATAATACAGTCTTTACTT-CCT-TACACTGTGGTTCCTGA-TTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11081114 85 + 30473821 TTAACACGCCAATCC--------CTGGTCTGAATGGATTCTTACGCAGAGGCCAC------GTACAGTCTTTGCTC-CTT-TAGGTTCCTGTTCCCCA-TGT i otoGar3.GL873534 C 0 I 3 s mm10.chr6 45788460 94 - 149736546 ATTATATGCCAAT------TGCACTGGTCAGAATGGCTTCCTAGGTGCAATTCATATTATAATGCACTTTCCAATT-CCTCTCCACTGCTGGGCCACA-TGT i mm10.chr6 C 0 C 0 s canFam3.chr20 16615226 94 + 58134056 GTTATATGCCAAT------TCTGCTGGTCAGAACAAACTCCGAGATAGAATTTATATTATAATGCAGTCCTCACTTACTT-TTCATTGATATTCTTCA-TTT i canFam3.chr20 I 3 C 0 s dasNov3.JH563077 1870641 95 - 2187301 --AATGATACAAT---AATTCTGTTGGCCAAAATGAATTCCTGGCTGGAATTCATATTAGAATGTGGTTTTCACTTACTT-TTTACTGTTACTCCTCA-TTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 630926 104 + 2414909 I e micMur3.chr32 1631941 163 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=45710.000000 s hg38.chrUn_KI270749v1 126525 3 + 158759 --TTT s panTro5.chr3 202013712 3 - 202621043 --TTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204781737 3 - 205426864 --TTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 11709 3 - 17846 --TTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67598450 3 + 86207423 --TTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66079695 3 + 204787373 --TTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61011543 3 - 192460366 --TTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11123784 3 - 17224310 --TTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17435681 3 - 41321030 --TTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64507252 3 - 101219884 --TTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893092 3 - 924385 --TTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6734116 3 - 10587913 --TTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068966 3 - 98464013 --TTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2553692 3 - 2763108 --TTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278082 3 - 4835464 --TTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744012 3 + 4093027 --TTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1632104 3 - 9149476 --TTT i micMur3.chr32 I 163 C 0 s otoGar3.GL873534 11081202 3 + 30473821 --TTT i otoGar3.GL873534 I 3 C 0 s mm10.chr6 45788554 3 - 149736546 --TTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16615320 3 + 58134056 --TTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1870736 4 - 2187301 TGTT- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 630926 104 + 2414909 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=1041063.000000 s hg38.chrUn_KI270749v1 126528 72 + 158759 ATCCTTTACATTGGCACTGTTCAAGCAGCA-CATTTTGCCACCATGCAATTA-TCTTTTGGCAACCCTGGGCAG s panTro5.chr3 202013715 72 - 202621043 ATCCTTTACGTTGGCACTGTTCAAGCAGCA-CGTTTTGCCACCATGCAATTA-TCTTTTGGCAACCCTGGGCAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204781740 72 - 205426864 ATCCTTTACGTTGGCACTGTTCAAGCAGCA-CGTTTTGCCACCATGCAATTA-TCTTTTGGCAACCCTGGGCAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 11712 72 - 17846 ATCCTTTACGTTGGCACTGTTCAAGCAGCA-CGTTTTGCCACCATGCAATTA-TCTTTTGGCAACCCTGTGTAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67598453 72 + 86207423 ATCCTTTACCTTGGCACTGTTCAAGCAGCA-CGTTTTGCCACCATGCAATTA-TCTTTTGGCAACGCTGGGCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66079698 72 + 204787373 ATCCTTTACCTTGGCACTGTTCAAGCAGTA-CATTTTGCCACCACGCAATTA-TCTTTTGACAACCCAGGGCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61011546 72 - 192460366 ATCCTTTACCTTGGCACTGTTCAAGCAGTA-CATTTTGCCACCACGCAATTA-TCTTTTGACAACCCAGGGCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11123787 72 - 17224310 ATCCTTTACCTTGGCACTGTTCAAGCAGTA-CATTTTGCCACCACGCAATTA-TCTTTTGACAACCCAGGGCAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17435684 71 - 41321030 ATCCTTTACCTTGGCACTGTTCAAACAGTA-CATTTTGCCACCACGCAATTA-T-TTTTGACAACCCAGGGCAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64507255 72 - 101219884 ATCCTTTACCTTGGCACTGTTCAAGCAGCA-CGTTTTGCCACCACGCAATTA-TCTTTTGACAACCCAGGGCAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893095 71 - 924385 ATCCTTTACCTTGGCACTGTTCAAACAGTA-CATTTTGCCAGCACGCAATTA-T-TTTTGACAACCCAGGGCAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6734119 72 - 10587913 ATCCTTTACCTTGGCACTGTTCAAGCAGCA-TGTTTTGCCACCACGCAATTA-TCTTTAGACAACCTAGGGCAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068969 72 - 98464013 ATCCTTTACCTTGGCACTGTTCAAGCAGCA-GGTTTTGTCACCATGCAATTA-TCTTTTGGCAAGTCTAGGCAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2553695 72 - 2763108 ATCCTTTACCTTGGCACTGTTCAAGTAGCA-CGTTTTGTCACCATGCAATTA-TCTTTTGGCAACTCTAGGCAG i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278085 72 - 4835464 ATCCTTTACCTTGGCACTGTTCAAGCAGCA-CGTTTTGTCACCGTGCAATTA-TCTTTTGGCAACTCTAGGCAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744015 72 + 4093027 ATCCTTTACCTTGGCACTGTTCAAGCAACA-CATTTTGTCACCATGCAATTA-TCTTTTGGCAACTCTAGGTAG i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1632107 74 - 9149476 ATCCTTTACCTTGGCACTGTTGAAGCAGCAACATTTCAGCACCTTGCAATTACTCTTTTGGCAACTCCGGGCAG i micMur3.chr32 C 0 I 67 s proCoq1.NW_012148064v1 631030 74 + 2414909 GTCCTTTGCCTTGCCACTGTTGAAGCAGCAGCATTTCAGCACCTTGCAATTACTCTTTTGGCAACTCCGAGCAG i proCoq1.NW_012148064v1 I 104 I 1 s otoGar3.GL873534 11081205 74 + 30473821 GTCCTTTCCCTTGGCACCTTTGAGGCAGCAGCATTTCAGCACCAGGCAATCACTCGCTTGGCAACTCCGGGCAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45788557 74 - 149736546 ATCCCATACTTTGGCACAAGATGGGTTGCAGTATTTCACAATGCTGCAATTATTCTTTTGACAAATCCAGGCAG i mm10.chr6 C 0 C 0 s canFam3.chr20 16615323 74 + 58134056 ATCCCTTACTTTGGCAGAGCTCAAACAGCAGTGTCTCACCATGGTGCAATTACTCTTTTGGCAACTCCAGGCAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1870740 68 - 2187301 ATTTCTTA------CAGTGCTTAGGAAACAGTGTTTAACCATGGTGCAGTTATTCTTTTGGCAACTCCAGGCAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=715600.000000 s hg38.chrUn_KI270749v1 126600 54 + 158759 CTG--TTGTTTGTGGAGAGTGTGT---------------GGTGGCATTGAACACCTACATGCTTATATATA s panTro5.chr3 202013787 54 - 202621043 TTG--TTGTTTGTGGAGAGTGTGT---------------GGTGGCATTGAACACCTACATGCTTATATATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204781812 54 - 205426864 TTG--TTGTTTGTGGAGAGTGTGT---------------GGTGCCATTGAACACCTACATGCTTATATATA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 11784 54 - 17846 TTG--TTGTTTGTGGAGAGTGTGT---------------GGTGGCATTGAACACCTACATGCTTATATATA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67598525 54 + 86207423 CTG--TTGTTTGTGGAGAGTGTGT---------------GGTGGCATTGAACACCTACATGCTTATAAATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66079770 54 + 204787373 TTG--TTGTTTGTGGAGAGTGTGT---------------GGTGGTATTGAACACCTACATGCTTATAAATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61011618 54 - 192460366 TTG--TTGTTTGTGGAGAGTGTGT---------------GGTGGTATTGAACACCTACATGCTTATAAATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11123859 54 - 17224310 TTG--TTGTTTGTGGAGAGTGTGT---------------GGTGGTATTGAACACCTACATGTTTATAAATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17435755 54 - 41321030 TTG--TTGTTTGTGGAGAGTGTGT---------------GGTGGTATTGAACACCTACATGCTTATAAATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64507327 54 - 101219884 TTG--TTGTTTGTGGAGATTGTGT---------------GGTGGCATTGAACACCTACATGCCTATAAATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893166 54 - 924385 TTG--TTGTTTGTGGAGAGTGTGT---------------GGTGGTATTGAACACCTACATGCTTATAAATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6734191 54 - 10587913 TTG--TTGTTTGTGGAGAGTGTGT---------------GGTGGCATTGAACGCCTACATACTTATAAATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46069041 69 - 98464013 TTG--TTGCTTGTGGAGAATGTGTTGCTTGTGGAGAATGTGTGGTGTCGAACACCTACATGCTTATAAATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2553767 69 - 2763108 TTG--TTGCTTGTGGAGAATGTGTTGCTTGTGGAGAATGTGTGGCGTTGAACACCTACACGCTTATAAATA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278157 69 - 4835464 TTG--TTACTTGTGGTGAATGTGTTGCTTGTGGAGAATGTGTGGCTTTGAACACCTACACGCTTATAAATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744087 69 + 4093027 TTG--TTGCTTGTGGAGAATGTGTTGCTTGTGAAGAATGTGTGGTGTTGAACACCTACACGCTTATAAATA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 631105 56 + 2414909 CTGGGCAGTTAATGGGGAATGTGT---------------GGTGGCACCAAACACCTACACGCTTATGAATA i proCoq1.NW_012148064v1 I 1 C 0 s otoGar3.GL873534 11081279 51 + 30473821 -----TCGCTGCTGGGGAATGTGT---------------GGTGGCACCAGACACCTACATGCTGATGAATG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45788631 54 - 149736546 TTG--ACATTTATGAATCAAGTAG---------------GATGGCACCCCATACCTCTGTGCTCATGAATA i mm10.chr6 C 0 C 0 s canFam3.chr20 16615397 54 + 58134056 TTG--TTAGTAGTGGAGAATGTGT---------------AGTGGCACGGAACACCTCCGGGCTTATAAATA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1870808 54 - 2187301 TTG--TTGCTTGTGAAGAAAGTGA---------------AGTGGCACAGAACACCTACGTGCTTGTGAGTA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e micMur3.chr32 1632181 67 - 9149476 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=4230627.000000 s hg38.chrUn_KI270749v1 126654 270 + 158759 CAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGCA-TTTAAGGACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTATGGAGGGCAGATGTCCTGGTTCTAGCACGACATGGTGGACTGGAATGGAATCAAAGATGCTCTTCCAATCTTT--TAGGTGTAATACATCAGTGTTAACACTCACTCATTCATATAGCAGGGGTAAATAATTAAGAGT s panTro5.chr3 202013841 270 - 202621043 CAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGCA-TTTAAGGACTTGTCTGATTCACATCTCTACCTCACATGTAGAGGA-TTCTTTTCTC-------CCCAGTGAAA-TTTTATGGAGATTTACTATGGAGGGAAGATGTCCTGGTTCTAGCACGACGTGGTGGACTGGAATGGAATCAAAGATGCTCTTCCAATCTTT--TAGGTGTAATACATCAGTGTTAACACTCACTCATTCATATAGCAGGGGTAAATAATCAAGAGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204781866 270 - 205426864 CAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGCA-TTTAAGGACTTGTCTGATTCACATCTCTACCTCACATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTATGGAGGGCAGATGTCCTGGTTCTAGCACGACGTGGTGGACTGGAATGGAATCAAAGATGCTCTTCCAATCTTT--TAGGTGTAATACATCAGTGTTAACACTCACTCATTCATATAGCAGGGGTAAATAATCAAGAGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 11838 270 - 17846 CAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGCA-TTTAACGACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTATGGAGGGCAGATGTCCTGGTTCTAGCACGACGTGGTGGACTGGAATGGAATCAAAGATGCTCTTCCAATCTTT--TAGGTGTAAAACATCAGTGTTAACACTCACTCATTCATATAGCAGGGGTAAATAATCAAGAGT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67598579 270 + 86207423 CAGGTGGCTGAAGTTAACCAATTATCCAGAGGCAGTTAGATGAATCATGCA-ATTAAGCACTTGTCTGATTCACATCTCTACCTCATATGCGGAGGA-TTCTTTTCTC-------CCCTGTAAAA-TTTTATGGAGATTTACCATGGAGGGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAATGGAATCAAAGGTGCTCTTCCAATCTTT--TAGGTGTAATACATCAGTGTTAACACTCACTCATTCATATAGCAGGGGTTAATAATCAAGACT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66079824 269 + 204787373 CAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTAAGCACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAATGGAATCAAAGGTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCACTCATATAGCAGAGGTAAATAATCAAGACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61011672 269 - 192460366 CAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTAAGCACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCCTGGTTCAAGCATGACATGGTGAACTGGAATGGAATCAAAGGTG-TCTTTCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCACTCATATAGCAGAGGTAAATAATCAAGACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11123913 269 - 17224310 CGGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTAAGCACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAACGGAATCAAAGCTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCACTCATATAGCAGAGGTAAATAATCAAGACT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17435809 244 - 41321030 CAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATG-------------AAGCACTTGTCTGAT-------------TCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAATGGAATCAAAGGTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCACTCATATAGCAGAGGTAAATAATCAAGACT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64507381 269 - 101219884 CAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCACGTA-TTTAAGCACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAAAGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAATGGAATCAAAGGTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCATTCATATAGCAGAGGTAAATAATCAAGACT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893220 256 - 924385 CAAGTGGCTGAACTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTAAGCACTTGTCTGAT-------------TCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAATGGAATCAAAGGTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCACTCATATAGCAGAGGTAAATAATCAAGACT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6734245 269 - 10587913 CAGGTGGCTGAAGTTAACCAGTTATTCAGAGGCAGTTAGATGAATCATGTA-TTTAAGCACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCATGGTTCCAGCATGATATGGTGGACTGGAATGGAATCAAAGGTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCATTCATATAGCAGGGGTAAATAACCAAGACT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46069110 270 - 98464013 CAGGTGGCTGAAGTTAATCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTTAGCACTTGTCTGATTCACATCTCTACTTCAAATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGTAGATTTACTATGGAGAGCAGATGTCCTGGTTCTAGCATTACATGGTGAACTGGAATGGAATCAAAGGTGCTCTTTCAGTCTTT--TATGTGTAATATATCAGCGTTAACACTCACTCATTCATATAGCAGGGGTAAATAATCAAGACT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2553836 270 - 2763108 CAGGTGGCTGAAGTTAATCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTTAGCACTTGTCTGATTCACATCTCTACTTCAAATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTATGGAGAGCAGATGTCCTGGTTCTAGCATTACATGGTGGACCGGAATGGAGTCAAATGTGCTCTTTCAATCTTT--TATGTGTAATATGTCAGTGTTAACACTCACTCATTCATATAGCAGGGGTAAATATTCAAGACT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278226 270 - 4835464 CAGGTGGCTGAAGTTAATCAATTATTCAGAGGCAGTTAGATGAATCATGCA-TTTTAGCACTTGTCTGATTCACATCTCTACTTCAAATGTAGAGTA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTATGGAGAGCAGATGTCCTGGTTCTAGCATTGCATGGTGGACTGGAATGGAATCAAAGGTGCTCTTTCAATCTTT--TATGTGTAATATATCAGTGTTAACACTCACTCATTCATATAACAGAGGTTAATAATCAAGACT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744156 270 + 4093027 CAGGTGGCTGAAGTTAATCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTTAGCACTTGTCTGATTCACATCTTTACTTCAAATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTAGGGAGATTTACTGTGAAGAGAAGATGTCCTGGTTCTAGCATTACATGCTGGACTGGAATGGAATCGGAGGTGCTCTTTCAATCTTT--TATGTGTAATATATCAGTGTTAACACTCACTCATTCATATAGCAAGGGTAAATAATCAAGACT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1632248 267 - 9149476 CAGGTGGCCGAAGCTAACCACTTATTCGGAGGCCGTTAGATGAATCACGTA-TTTTAACATTTGTCTGATTCGCATCCCCACTTTGCATGTAGCGGA-TTCTTTTCTC-------CCCAGTGAAA-TTTTATGGAGCTTTACTGTGGAGAGCAGATGTCCCAGTTCTAGCGTTACATGGCGGACTGGAAAGGATTCAAAGGTGCTCTTCCGGTCCTT--TAGGCATAATATGTCAGTGTTAGCACTCGCTGATT-ATACAGCAGA--CAAATAATCAAGACT i micMur3.chr32 I 67 C 0 s proCoq1.NW_012148064v1 631161 267 + 2414909 CAGGTGGCCGAAGCTAACCAATTATTCAGAGGCAGTTAGGTGAATCACGTA-TTTTAACACTTGTCTGATTCACATCTCTGCTTCGCATGTAGAGGA-TCCTTTTCCC-------CACAATGAAA-TTTTATGGAGTTTTACTACGGAGAGCAGATGTCCCAGTTCTAGCATTACATGGCAGACTGGAAGGGATTCAAAGGTGCTCCTCCAGTCTTT--TAGGCATGGTATGTCAGTGTTAGCACTCGCTGATT-ATATAGCAGA--TAAATAATCAGGACA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11081330 264 + 30473821 CAGGTGGCTGAAGTTAACCGGTTACTCAGAGGCAGTTGGATGAATCACGTA-TTTTAACACTTGTCTGACTCACATCTCTGCTTCACACGTACAGGATTTTTTTTCTC-------CCCAGTGAAG--TTTATGGAGTTTTACTATGGAGAACAGATGTCCTGGTTCTAGCACTACACGGCAGACTGGAAGGCTTTCAAAGGTGCTCTTCAAGTGTTT--AAGGCATAATAGATCAACGTAAACACTCACTGATT-AAATTACAGG--CAAGCGATCAGG--- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45788685 262 - 149736546 CAGGTGGC-AAAGCTGACCAATTATTCAGAGGCAGCTAGATGCAGCACATG-TTTTGGTGTGTGTCTGATTCCCATTCCTACTCCA-ATGTAGAGGG-TTCTTTTCTC-------TG-GGCTGAA-TTACATGGAGTTTTACTGTAGAGAGCAGATGTCCTAATTCAACCACTCCATGGTACACTGGAATGGATTCAAAGGTA-TACTCCAGTCTTT---GCGTATAATTTATCAGTGGGAACACTCACTGATTC-TATAGCAAA--CACATAATCAGATCC i mm10.chr6 C 0 C 0 s canFam3.chr20 16615451 261 + 58134056 CAGGTGGCCTAAGTTAACCAATTATTTAGAGGC----AGATAAGTCATGCA-GTTTAGCAGTTGTCTGATTCACATCTCTACTCCACATATAGAGGA-TTCCTTTTTC-------CCTGGTGAGATTTTTATGGAGCTTTACTAGGAAGACCAGATGTCCTGGTACTTGCATCACATGATAGACTGGAGTAGATTCAAAGGTGCTCTTCCAGTGTTT--CAGGTGTGGTATATCAGTGCTATCACTGACTGACTC-TCCAGCAGA--TAAATA---AAGATT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1870862 274 - 2187301 CAGGTGGCCAGAGGTAACCAATTATTCAGAGGCAGCCAAATGAGCCATGTATTTTTTACACCTGTCTGATTCACATCTCCACACCACATGTAGAGGA-TTCTCACCCCACACACACACCATGAAA-TTTTATGTAGTTTTACTATGGAAAGCAGATGTCCCAGTCCTAGCATTACATGGTGGACTGGAATGGATTCAGAGGATCTGTTCCAGTCTTTTTTTGGTGTAGTATATCAGTGTTAACGTTGGCTCATTT-TAAAGCAGA--TAAATA---AAGATT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1391239 2585 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=1083702.000000 s hg38.chrUn_KI270749v1 126924 72 + 158759 GTGGCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTTTCAGTT s panTro5.chr3 202014111 72 - 202621043 GTGGCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTTTCAGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782136 72 - 205426864 GTGGCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTTTCAGTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12108 72 - 17846 GTGGCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTTTCAGTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67598849 72 + 86207423 GGGGCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTTTCAGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080093 72 + 204787373 GGGTCATCGTAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61011941 72 - 192460366 GGGTCATCGTAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11124182 72 - 17224310 GGGTCATCGTAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17436053 72 - 41321030 GGGTCATCGTAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64507650 72 - 101219884 GGGTCATCATAGAAGC-AGCAAGTCTTGAATTGTGCAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893476 72 - 924385 GGGTCATCGTAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6734514 72 - 10587913 GGGTCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTG i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1393824 72 - 1467263 GGGTCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGGCAGTG i rhiRox1.KN296641v1 I 2585 I 1419 s calJac3.chr15 46069380 72 - 98464013 GGGACAACATGGAAGC-AGCAAGTCTTGAACTGTGGAGAGCCTTGCTTTTTTGTTGTCATTTTATTGTCATTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554106 73 - 2763108 GGGACAACATAGGAGCAAGCAAGTCTTGAACTGTGGAGAGTCTTGCTTTTTTGTTGCCATTTTATTGTCATTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278496 72 - 4835464 GGGACAACATAGAAGC-AGCAAGTCTTGAACTGTGGAGAGTCTTGCTTTTTTGTTGTCATTTTATTGTCATTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744426 72 + 4093027 GGGACAACACAGAAGC-ATCAAGTCTTGAACTGTGGAGAGTCTTGCTTTTTTGTTGTCATTTTACTGTCATTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1632515 69 - 9149476 GAGGCATCACAGAAGC-AGCTGGTCTTGCATTGTGTAGAGTCCTGCTTTCTC---GTCGTCTTGTTGGCATTG i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 631428 72 + 2414909 GAGACATCACAGAAGC-AGTCAGTCTTGCATTGTGTAGAGTCCTACTTTCTCGTTGTCGTTTTATTGCCATTT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11081594 64 + 30473821 --------ACAGCAGC-AGTCAGTCTCCCATGGGGCAGGGTCCTGCTTTCTTGGGGTTGTTTCATTGTCATTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45788947 46 - 149736546 AAAACATCGTTGAAAT-GGCCAAC-----ATTGTTAAGA------------TCTTGTCATTTTA--------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16615712 69 + 58134056 GGGACATCACAGAAGC-AGCTAGCCT---AGCCTGGAGTGTCCTGCTTTCATGTCGTCTTTTTATTGCCATTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1871136 67 - 2187301 GGAATGTTATAGAAG--AATCAGTCT----GCATGGAGAGTCCCAATTTTTTATCGTGGTCTTACTGTCATTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=1333995.000000 s hg38.chrUn_KI270749v1 126996 91 + 158759 TAGCTGAAAGTACACAGTCTTCCTTGTTTCGAACATTTTC-----TACTTT------AT---GGCAATAG-----------ATTAAATTTAATCATGTTTTAGTTCACAAATTGTT s panTro5.chr3 202014183 91 - 202621043 TAGCTGAAAGTACATAGTCTTCCTTGTTTCGAACATTTTC-----TACTTT------AT---GGCAATAG-----------ATTAAATTTAATCATGTTTTAGTTCACAAATTGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782208 91 - 205426864 TAGCTGAAAGTACACAGTCTTCCTTGTTTCGAACATTTTC-----TACTTT------AT---GGCAATAG-----------ATTAAATTTAATCATGTTTTAGTTCACAAATTGTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12180 90 - 17846 TAGCTGAAAGTACACAGTCTTCCTTGTTTCGAACATTCTC-----TACTTT------AT---GGCAATAG-----------ATTAAATTTAATCATGCTTTACTTCACAAA-TGTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67598921 91 + 86207423 TAGCTGAAAGTACACAGTCTTCCTTGTTTCGAACATTTTC-----TACTTC------AT---GGCAATAC-----------ATTAAATTTAATCATGTTTTAGTTCACAAATTGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080165 88 + 204787373 TAGCTGAAAGTAC--AGTCTTCCTTATTTCAAACGTTTT------TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61012013 88 - 192460366 TAGCTGAAAGTAC--AGTCTTCCTTATTTCAAACGTTTT------TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11124254 88 - 17224310 TAGCTGAAAGTAC--AGTCTTCCTTATTTCAAACGTTTT------TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17436125 88 - 41321030 TAGCTGAAAGTAC--AGTCTTCCTTATTTCAAACGTTTT------TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64507722 88 - 101219884 TAGCTGAAAGTAC--AGTCTTCCTTATTTCAAACATTTG------TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893548 88 - 924385 TAGCTGAAAGTAC--AGTCTTCCTTATTTCAAATGTTTT------TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6734586 88 - 10587913 TAGCTGAAAATAC--AGTCTTCCTTATTTCAAACATTTT------TACTTC------AT---GGCAGTAG-----------ATTATATTTAATCATGTTTTAGTTCACAAATTGTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46069452 91 - 98464013 TAGCCAAAAGTACACAGTCTTCCTTGTTTCAAACATTTTC-----TACTTC------AT---AACAATAG-----------AATAAATTTAATCATGTTTTAGTTCACAAATTGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554179 91 - 2763108 TAGCCAAAAGTACACAGTCTTCCTTGTTTCAAGCATTTTC-----TACTTC------AC---AGCAATAG-----------AATAAATTTAATCATGTTTTAGTTCACAAATTATT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278568 91 - 4835464 TAGCCAAAAGTACACAGTCTTCCTTGTTTCAAACATTTTC-----TACTTC------AT---AGCAATAG-----------AATAAATTTAATCATGTTTTAGTTCACAAATTGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744498 90 + 4093027 TAGCCAAAAGTACACAGTCTTCCTTGTTTCAAACATTTTC-----TACTTC------AT---AGCAATAG-----------AATAAATTTAATCATGTTTTAGTTCACAAA-TGTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1632584 99 - 9149476 TAACCGAAAGCACGAAGTCTTCCTTGTTTCAAATATTTTCTATAATACTTC---ATGAT---GGCAATAG-----------GTTGTATTTAATCATGTTTTAGTTCACAAATTGTT i micMur3.chr32 C 0 I 500 s proCoq1.NW_012148064v1 631500 99 + 2414909 TAACTGAAAGTACGAAGTCTTCCTTGTTTCAAACATTTTCTATAATACTTC---ATGAT---GACAATAG-----------ATTGTATTTAATCATGTTTGAGTTCAAAAATTGTT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11081658 105 + 30473821 TAACTGAAAGTACAAACGCTTCCTTGTTTCAAGCATCTTC-----TACTTC---AGGAC---GGCAATAGATCATATTTTAATCATATTTCATCATGTTTTAGTCCACAGAATGTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45788993 92 - 149736546 -AACTGAAAGTACAAGGTCTTCCTTGTGTCAAACATTTCC-----CACTTT------ACAGAGGCAATTA-----------ATTCCG-TTAAGCATGGTTTAGTTCTCAAATTAGT i mm10.chr6 C 0 C 0 s canFam3.chr20 16615781 93 + 58134056 TAACTGAAAGTACA-GACCATCCTTGTTTCAAACATTTTT-----TACTTT---ACAAT---GGCAACAG-----------ATTCCATTTAATGACACTTTACTTCACAAATTGTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1871203 97 - 2187301 TTTCTGAAATTACAAGGTCTTCCTTGTTTTAAACATCTTC-----TACTACTTACTGTT---GGCAATAG-----------ATTCTATTTAATGATGTTTTAGTTCACAAATTGTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=1207853.000000 s hg38.chrUn_KI270749v1 127087 101 + 158759 TCTTGGTGTATAT-----GTGTTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCTACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTCTA-AA s panTro5.chr3 202014274 100 - 202621043 TCTTGGTGTATAT-----GTGTTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCTACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTCT--AA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782299 101 - 205426864 TCTTGGTGTATAT-----GTGTTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCTACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTCTA-AA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12270 100 - 17846 TCTTGGTGTATAT-----GTGTTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCTACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTACCTCT--AA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599012 100 + 86207423 TCTTGGTGTACAT-----GTGTTTTTATTTCCC-ACTATGTCATTATTTCAA--AA----------GAATCTACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTCT--AA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080253 101 + 204787373 TTTTGATGTATAT-----GTGCTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCGACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTTA-AA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61012101 101 - 192460366 TTTTGATGTATAT-----GTGCTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCGACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTTT-AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11124342 101 - 17224310 TTTTGATGTATAT-----GTGCTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCGACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTTA-AA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17436213 101 - 41321030 TTTTGATGTATGT-----GTGTTTTTATTTTCC-ACTATGTCACTATTTCAA--AA----------TAATCGACTGCTCTACTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTTA-AA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64507810 101 - 101219884 TTTTGATGTATAT-----GTGTTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCAACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTTA-AA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893636 100 - 924385 TTTTGATGTATAT-----GTGTTTTTATTTTCC-ACTATGTCACTATTTCAA--AA----------GAATCGACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTT--AA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6734674 100 - 10587913 TTTTGATGTATAT-----GTG-TTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCGACTGCTCTTCGGGTTAAATTTGCTTACCAACACTCT------TTGCCTTTA-AA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46069543 100 - 98464013 TCTTCATGTAT-T-----GTGTTTTTCTTTTCC-ATTATGTTATTATTTCAA--AA----------CAGTCAATTGCTCTTCTGGTTAAATTCACTTACCAACCTTCT------TTGCCTCTG-AA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554270 101 - 2763108 TCTTCATGTAT-T-----GTGTTTTTCTTTTCC-ATTGTGTTATTATTTCAA--AA----------CAGTCAATTGCTTTTCTGGTTAAATTCACTTACCAACCTTCT------TTGCCTCTGAAA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278659 99 - 4835464 TCTTCATGTAT-T-----GTGTTTTTCTTTTCC-ATTATGTT-TTATTTCAA--AA----------TAGTAAATTGCCCTTCTGGTTAAATTCACTTACCAACCTTAT------TTGCCTCTG-AA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744588 100 + 4093027 TCTTCATGTAT-T-----GTGTTTTTCTTTTCC-ATTATGTTATTATTTCAA--AA----------CAGTCAACCACTCTTCTGGTTAAATTCACTTACCAACCTTCT------TTGCCTCTG-AA i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 631599 104 + 2414909 TCTTTATGTATAT-----GTGCCTTTATTTTCCAACTTTGTCATAATTTCAATGGA----------GAGTCAATTGTTCTTCTGGTTAAATTCACTTATCAATCTTCT------TTGCTCCTG-AA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11081763 104 + 30473821 TCTTTGTGCCTAT-----GTGTCTTTATTCTCCAACTATAGCATAATTGCAATGGA----------GAGTTAATTGCTCTTCTGGTTAAATTCACTTCCTAACCTTCT------TTGCTCCTG-AA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45789085 115 - 149736546 TCTTCCTGCCTGTCTTGAGTGTCTCGAGTCTTC-AC-------CTATTACAG--AATGGAAAGAACAAGTCATTTGCACATCCATTTAAGTTGACCTCTTAGTTTTTTTTTTTATTTTCTCTA-AA i mm10.chr6 C 0 C 0 s canFam3.chr20 16615874 93 + 58134056 GCTTCATGCATAT-----GT--CTTTATTCTCC-A--------TAATTTCAATGAA----------GAGTCCATTGTTCTGCTTGTTAAACTCACTTTCCAACCTTCT------TTGTTCCCT-AG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1871300 104 - 2187301 TCTTCATGAATAT-----GTGTCTTTATTCTTTGACTATATCATCATTTCAATGAA----------GGGTCAATTGCTCTGCTGGCTAAATTCATTTCCCAAACTTCT------TGTCCCCCC-AA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e micMur3.chr32 1632683 500 - 9149476 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=26118.000000 s hg38.chrUn_KI270749v1 127188 4 + 158759 AAAA s panTro5.chr3 202014374 4 - 202621043 AAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782400 4 - 205426864 AAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12370 4 - 17846 AAAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599112 4 + 86207423 AAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080354 4 + 204787373 AAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61012202 4 - 192460366 AAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11124443 4 - 17224310 AAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17436314 4 - 41321030 AAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64507911 4 - 101219884 AAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893736 4 - 924385 AAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6734774 4 - 10587913 AAAA i colAng1.NW_012114711v1 C 0 I 3 s calJac3.chr15 46069643 3 - 98464013 ATA- i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554371 3 - 2763108 AAA- i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278758 3 - 4835464 AAA- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744688 3 + 4093027 AAA- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1633183 4 - 9149476 AAAA i micMur3.chr32 I 500 C 0 s proCoq1.NW_012148064v1 631703 2 + 2414909 --AA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11081867 4 + 30473821 AAAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45789200 1 - 149736546 ---A i mm10.chr6 C 0 I 3 s canFam3.chr20 16615967 3 + 58134056 -AAA i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1871404 4 - 2187301 AAAA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=-455.000000 s hg38.chrUn_KI270749v1 127192 1 + 158759 -A s panTro5.chr3 202014378 1 - 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782404 1 - 205426864 -A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12374 1 - 17846 -A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599116 1 + 86207423 -A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080358 1 + 204787373 -A i rheMac8.chr2 C 0 I 2 s macFas5.chr2 61012206 1 - 192460366 -A i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11124447 1 - 17224310 -A i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17436318 1 - 41321030 -A i cerAty1.NW_012009469v1 C 0 I 2 s chlSab2.chr22 64507915 1 - 101219884 -A i chlSab2.chr22 C 0 I 2 s manLeu1.NW_012098965v1 893740 1 - 924385 -A i manLeu1.NW_012098965v1 C 0 I 2 s calJac3.chr15 46069646 1 - 98464013 -A i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554374 1 - 2763108 -A i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278761 1 - 4835464 -A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744691 1 + 4093027 -A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1633187 1 - 9149476 -T i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 631705 1 + 2414909 -T i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11081871 1 + 30473821 -A i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45789204 1 - 149736546 -A i mm10.chr6 I 3 C 0 s dasNov3.JH563077 1871408 1 - 2187301 T- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I e canFam3.chr20 16615970 1 + 58134056 I e colAng1.NW_012114711v1 6734778 3 - 10587913 I a score=3507779.000000 s hg38.chrUn_KI270749v1 127193 219 + 158759 AGATGAA-TAACAGAGCCCAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATACTGTATG----------TACGTGTGTATTGCAAAAAATAACTAGA-TTTTCCTGGGCTTGGCATCACTAAAATGTCCAAAAAATATCTTA-TTCCCATGAACATAAACTTCAAAATGTCAACTGCATTTACAATTACGAATAATAGTGAGCTGCCATTCCC-AAGGGAAATAATGA s panTro5.chr3 202014379 219 - 202621043 AGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATACTGTATA----------TACATGTGTATTGCAAAAAATAACTAGA-TTTTCCTGGGCTTGGCATCACTAAAATGTCCAAAAAATATCTTA-TTCCCATGAACATAAACTTCAAAATGTCAACTGCATTTACAGTTACGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782405 218 - 205426864 GGATGAA-TAACAGAGCCCAATTTGAAATGG-CATCTCTGTTACTCCA---ATTAACATACTGTATA----------TACATGTGTATTGCAAAAAATAACTAGA-TTTTCCTGGGCTTGGCATCACTAAAATGTCCAAAAAATATCTTA-TTCCCATGAACATAAACTTCAAAATGTCAACTGCATTTACAATTACGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12375 219 - 17846 AGATGAA-TAACAAAGCCCAATTTGAAATGGCCATCTCTGTTACTCCA---AGTAACATACTGTATA----------TACATGTGTATTGCAAAAAATAACTAGA-TTTTCCTGGGCTTGGCATCACTAAAATGTCCAAAAAATATCTTA-TTCCCATGAACATAAACTTCAAAATGTCAACTGCATTTACAATTACGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599117 217 + 86207423 AGATGAA-TA--AGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATACTGTATA----------TACATGTGTATTGCAAAAAATAACTAGA-TTTTCCTGGGCTTGGCATCACTAAAATGTCCAAAAAATATCTTA-TTCCCATGAACATAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080361 219 + 204787373 TGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATGCTGTATA----------TACATGTGTATTGCAAAAAATAACTAGA-TTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCCGAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i rheMac8.chr2 I 2 C 0 s macFas5.chr2 61012209 219 - 192460366 TGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATGCTGTATA----------TACATGTGTATTGCAAAAAATAACTAGA-TTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCAGAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11124450 219 - 17224310 TGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATGCTGTATA----------TACATGTGTATTGCAAAAAATAACTAGA-TTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCAGAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17436321 219 - 41321030 TGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATGCTGTATA----------TACACGTGTATTGCAAAAAATAACTAGA-TTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i cerAty1.NW_012009469v1 I 2 C 0 s chlSab2.chr22 64507918 219 - 101219884 AGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCCCTGTTACTCCA---ATTAACATGCTGTATA----------TACATGTGTATTGCAAAAAATAACTAGA-TTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-TTCCCATGAACCTAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 893743 219 - 924385 TGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATGCTGTATA----------TACATGTGTATTGCAAAACATAACTAAA-TTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i manLeu1.NW_012098965v1 I 2 C 0 s colAng1.NW_012114711v1 6734781 219 - 10587913 TGATGAA-TAACAGAGCCAAATTTGAAATGACCATCTCTGTTACTCCA---ATTAACATGCTGTATA----------TACATGTGTATTGCAAAAAGTAACTAGA-TTTTCCGGGGCTTGGCATCCTTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46069647 218 - 98464013 ACATGAA-TAACAGAGCCAAATTTGAAATGACCATCCCTTTTACTCTA---ATTAACATACTGTATA----------TACATATGTATTACAAAAAATAACTACA-TTTTCCTGAACTTGGCAGCCCTAAAATATCC-AAAAATATCTTA-GTCCCATGAACATAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGTGAACTGCCATTCCC-AAGGGAAATAATAA i calJac3.chr15 C 0 I 3 s saiBol1.JH378290 2554375 218 - 2763108 ACATGAA-TAACAGAGCCAAATTTGAAATGGCCATCCCTTTTACTCTA---ATTAACATACTGTATA----------TACATGTGTATTACGAAAAATAACTGGA-TTTTCCTGAACTTGGCAGCCTTAAAATATCC-AAAAAAATCTTA-GTCCCATGAACATAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGTGAACTGCCATTCCC-AAGGGAAATAATAA i saiBol1.JH378290 C 0 I 3 s cebCap1.NW_016107467v1 278762 217 - 4835464 ACATGAA-TAAC--AGCCAAATTTGAAATGGCCATCCCTTTTACTCCA---ATAAACATACTGTATA----------TACATGTGTATTATGAAAAATAACTAGG-TTTTCCTGAACTTGGCAGCCCTAAAATATCCAAAAAATATCTTA-GTCCCATGAACATAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGTGAACTGCCATTCCC-AAGGGAAATAATAA i cebCap1.NW_016107467v1 C 0 I 3 s aotNan1.NW_018502033v1 3744692 218 + 4093027 ACATGAA-TAACAGAGCCAAATTTGAAATGGCCATCCCTTTTACTCCA---ATTAACATACTGTATA----------TACATGTATATTAC-AAAAGTAACTAGA-TTTCCCTGAACTTGGCAGCCCTAAAATATCCAAAAAATATCTTA-GTCCCATGAACATAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGTGAACTGCCATTCCC-AAGGGAAATAATAA i aotNan1.NW_018502033v1 C 0 I 3 s micMur3.chr32 1633188 220 - 9149476 AGATGAG-TAAAAGAACCAAATTTGAAATGGCCATCCACGTGAGTCTA---ATTAACATACGGTATA----------TACATATGTATTACAAAGAAAAGCTAGATTTTTTCTGTGCTTGACATCCCTAAAATATACAAAAAATATCTTA-GTCCCATGAACACAAACTTCAGAATGTCAATTACATTTACAATTATGAATAATAGGGAGCTGCCATTCCA-AAGGGAAATTATAA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 631706 229 + 2414909 AGATGAG-TAAGAGAACCAAATTTGAAATGGCCATCCACGTGAGTCCA---ATTAACCTATGGtatatatatatatgtatatatgtatTACAAAGAAAAGCTAGA-TTTTCCTGGGCTTGACATCCCCAAAATATACAAAAAATATCTTA-GTCCCATGAACACAAACTTTAAAATGTCAATTGCATTTACAATTATGAATAATAGGGAGCCACCATTCTT-GAGGGAAATAATAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11081872 220 + 30473821 AGACCAGTTAACAGAATCCAATTTGAAGTGGCCACCCATGTTAGGCCA---TTTAACATATGGCGCA----------TACATATGTATTACAACGAAGAGCTAGA-TTTTCCTGGGCTTGACATCCCTAAAATATCCCCAAAACATCTTA-GTTCCATGAACACAAACTTCAAAATGACAGTTGCATTTACAATTATGAGTAATAGGAAACTGCCGTTCTT-GAGGGAAATAATAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45789205 210 - 149736546 GAATGAA----------CAGACCTGAGATGGCCATTGGGATTAATGCATACGTTAATATG--ATAGG----------TTCATATGTATTACAAAAAA-AGCTATG-TTTTCTTAAACTTGACATCTCCAAAATACCCCCAAACTATCTTA-GTCCCATGGACAT-AACTTCAAAATGTCAGCTGCATTTACAATTACGAATAATAGTGAAATTCTACTCCTGGGGGGGAATAATAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16615971 215 + 58134056 --ATGAA-TAATAAAGCC-AATCTGAAATGGTCATCTAAGTTAGCCCA---ATTAACATATGGTAGA----------TACATATGGATTACAAAGAAAAACTAGA-TTTTCCTGGGCTTCATATCCCAAAAATGCCC-AAAAATATCTTA-TCCCCATGAACATAAACTTCAAAATGTCAATCGCATTTACAATTATGAATAATAGGGAACTGTTGCTCCC-AAGGGAAATAATAA i canFam3.chr20 I 1 I 3 s dasNov3.JH563077 1871409 199 - 2187301 -------------GAACCAAATTTGAAATGACCCTCCATGTTACTC-----CTTAAAATATGATATT----------TGCATATGTATTAAAAAGAAACACTAGA-CTTTCCTGGGCTTAACATC-CTAAAAAGTC--AAAAATATCTTATTTTCCATGAA----AGTTTCAAAATGTCAACTACATTTAAAATTATGAATAATTGGAAACTGCTATTCCT-AAGGGAAATAATAA i dasNov3.JH563077 C 0 I 3 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1245725 2597 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=43362.000000 s hg38.chrUn_KI270749v1 127412 2 + 158759 AA s panTro5.chr3 202014598 2 - 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782623 2 - 205426864 AA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12594 2 - 17846 AA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599334 2 + 86207423 AA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080580 2 + 204787373 AA i rheMac8.chr2 C 0 I 3 s macFas5.chr2 61012428 2 - 192460366 AA i macFas5.chr2 C 0 I 3 s macNem1.NW_012018021v1 11124669 2 - 17224310 AA i macNem1.NW_012018021v1 C 0 I 3 s cerAty1.NW_012009469v1 17436540 2 - 41321030 AA i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64508137 2 - 101219884 AA i chlSab2.chr22 C 0 I 3 s manLeu1.NW_012098965v1 893962 2 - 924385 AA i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6735000 2 - 10587913 AA i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1248322 2 - 2311269 AA i rhiBie1.NW_016820128v1 I 2597 C 0 s calJac3.chr15 46069868 2 - 98464013 AA i calJac3.chr15 I 3 C 0 s saiBol1.JH378290 2554596 2 - 2763108 AA i saiBol1.JH378290 I 3 C 0 s cebCap1.NW_016107467v1 278982 2 - 4835464 AA i cebCap1.NW_016107467v1 I 3 C 0 s aotNan1.NW_018502033v1 3744913 2 + 4093027 AA i aotNan1.NW_018502033v1 I 3 C 0 s micMur3.chr32 1633408 2 - 9149476 AA i micMur3.chr32 C 0 I 3 s proCoq1.NW_012148064v1 631935 2 + 2414909 AA i proCoq1.NW_012148064v1 C 0 I 3 s otoGar3.GL873534 11082092 2 + 30473821 AA i otoGar3.GL873534 C 0 I 3 s mm10.chr6 45789415 2 - 149736546 GA i mm10.chr6 C 0 C 0 s canFam3.chr20 16616189 2 + 58134056 AA i canFam3.chr20 I 3 C 0 s dasNov3.JH563077 1871611 2 - 2187301 AA i dasNov3.JH563077 I 3 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59570521 1786 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=27600.000000 s hg38.chrUn_KI270749v1 127414 1 + 158759 G s panTro5.chr3 202014600 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782625 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12596 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599336 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080585 1 + 204787373 G i rheMac8.chr2 I 3 C 0 s macFas5.chr2 61012433 1 - 192460366 G i macFas5.chr2 I 3 C 0 s macNem1.NW_012018021v1 11124674 1 - 17224310 G i macNem1.NW_012018021v1 I 3 C 0 s cerAty1.NW_012009469v1 17436545 1 - 41321030 G i cerAty1.NW_012009469v1 I 3 C 0 s papAnu3.chr2 59572307 1 + 187378091 G i papAnu3.chr2 I 1786 C 0 s chlSab2.chr22 64508142 1 - 101219884 G i chlSab2.chr22 I 3 C 0 s manLeu1.NW_012098965v1 893967 1 - 924385 G i manLeu1.NW_012098965v1 I 3 C 0 s colAng1.NW_012114711v1 6735002 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1248324 1 - 2311269 G i rhiBie1.NW_016820128v1 C 0 I 635 s calJac3.chr15 46069870 1 - 98464013 G i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554598 1 - 2763108 G i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278984 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744915 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1633413 1 - 9149476 G i micMur3.chr32 I 3 C 0 s proCoq1.NW_012148064v1 631940 1 + 2414909 G i proCoq1.NW_012148064v1 I 3 C 0 s otoGar3.GL873534 11082097 1 + 30473821 G i otoGar3.GL873534 I 3 C 0 s mm10.chr6 45789417 1 - 149736546 G i mm10.chr6 C 0 I 3 s canFam3.chr20 16616191 1 + 58134056 G i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1871613 1 - 2187301 G i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=46046.000000 s hg38.chrUn_KI270749v1 127415 2 + 158759 AA s panTro5.chr3 202014601 2 - 202621043 AA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782626 2 - 205426864 AA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12597 2 - 17846 AA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599337 2 + 86207423 AA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080586 2 + 204787373 AA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61012434 2 - 192460366 AA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11124675 2 - 17224310 AA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17436546 2 - 41321030 AA i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59572308 2 + 187378091 AA i papAnu3.chr2 C 0 I 634 s chlSab2.chr22 64508143 2 - 101219884 AA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893968 2 - 924385 AA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735003 2 - 10587913 AA i colAng1.NW_012114711v1 C 0 I 3 s calJac3.chr15 46069871 2 - 98464013 AA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554599 2 - 2763108 AA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278985 2 - 4835464 AA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744916 2 + 4093027 AA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1633414 2 - 9149476 AA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 631941 2 + 2414909 AA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11082098 2 + 30473821 AA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45789421 2 - 149736546 AA i mm10.chr6 I 3 C 0 s canFam3.chr20 16616192 2 + 58134056 AA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1871614 2 - 2187301 AA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248325 635 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=209727.000000 s hg38.chrUn_KI270749v1 127417 11 + 158759 ATATTTCATAG s panTro5.chr3 202014603 11 - 202621043 ATGTTTCATAG i panTro5.chr3 C 0 I 1 s panPan2.chr3 204782628 11 - 205426864 ATGTTCCATAG i panPan2.chr3 C 0 I 1 s gorGor5.CYUI01007532v1 12599 11 - 17846 ATATTTCATAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599339 11 + 86207423 ATGTTTCATAG i nomLeu3.chr21 C 0 I 3 s rheMac8.chr2 66080588 11 + 204787373 ATGTTTCATAG i rheMac8.chr2 C 0 I 3 s macFas5.chr2 61012436 11 - 192460366 ATGTTTCATAG i macFas5.chr2 C 0 I 3 s macNem1.NW_012018021v1 11124677 11 - 17224310 ATGTTTCATAG i macNem1.NW_012018021v1 C 0 I 3 s cerAty1.NW_012009469v1 17436548 11 - 41321030 ATGTTTAATAG i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64508145 11 - 101219884 ATGTTTCATAG i chlSab2.chr22 C 0 I 3 s manLeu1.NW_012098965v1 893970 11 - 924385 ATGTTTAATAG i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6735008 11 - 10587913 ATGTTTCATAG i colAng1.NW_012114711v1 I 3 I 3 s calJac3.chr15 46069873 11 - 98464013 ATGTTTCATAG i calJac3.chr15 C 0 I 3 s saiBol1.JH378290 2554601 11 - 2763108 ATGTTTCATAG i saiBol1.JH378290 C 0 I 3 s cebCap1.NW_016107467v1 278987 11 - 4835464 ATGTTTCATAG i cebCap1.NW_016107467v1 C 0 I 3 s aotNan1.NW_018502033v1 3744918 11 + 4093027 ATGTTTCATAG i aotNan1.NW_018502033v1 C 0 I 3 s micMur3.chr32 1633416 11 - 9149476 ATGTTTCATAG i micMur3.chr32 C 0 I 4 s proCoq1.NW_012148064v1 631943 11 + 2414909 ATGTTTCATAG i proCoq1.NW_012148064v1 C 0 I 7 s otoGar3.GL873534 11082100 11 + 30473821 ATGTTTCTTAG i otoGar3.GL873534 C 0 I 4 s mm10.chr6 45789423 11 - 149736546 AGGCTTCATAG i mm10.chr6 C 0 I 3 s canFam3.chr20 16616194 11 + 58134056 ATGTTTCATAG i canFam3.chr20 C 0 I 3 s dasNov3.JH563077 1871616 11 - 2187301 ATGTTTCATAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572310 634 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248325 635 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=-1936.000000 s hg38.chrUn_KI270749v1 127428 1 + 158759 -T s panTro5.chr3 202014615 1 - 202621043 -T i panTro5.chr3 I 1 C 0 s panPan2.chr3 204782640 1 - 205426864 -T i panPan2.chr3 I 1 C 0 s gorGor5.CYUI01007532v1 12610 1 - 17846 -A i gorGor5.CYUI01007532v1 C 0 C 0 s dasNov3.JH563077 1871627 1 - 2187301 A- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 631954 7 + 2414909 I e mm10.chr6 45789434 3 - 149736546 I e micMur3.chr32 1633427 4 - 9149476 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572310 634 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248325 635 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I e otoGar3.GL873534 11082111 4 + 30473821 I e manLeu1.NW_012098965v1 893981 3 - 924385 I e macNem1.NW_012018021v1 11124688 3 - 17224310 I e rheMac8.chr2 66080599 3 + 204787373 I e aotNan1.NW_018502033v1 3744929 3 + 4093027 I e cebCap1.NW_016107467v1 278998 3 - 4835464 I e canFam3.chr20 16616205 3 + 58134056 I e saiBol1.JH378290 2554612 3 - 2763108 I e calJac3.chr15 46069884 3 - 98464013 I e colAng1.NW_012114711v1 6735019 3 - 10587913 I e chlSab2.chr22 64508156 3 - 101219884 I e cerAty1.NW_012009469v1 17436559 3 - 41321030 I e macFas5.chr2 61012447 3 - 192460366 I e nomLeu3.chr21 67599350 3 + 86207423 I a score=92274.000000 s hg38.chrUn_KI270749v1 127429 5 + 158759 ---TTTTT s panTro5.chr3 202014616 5 - 202621043 ---TTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782641 5 - 205426864 ---TTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12611 5 - 17846 ---TTTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599353 5 + 86207423 ---TTTTT i nomLeu3.chr21 I 3 C 0 s rheMac8.chr2 66080602 5 + 204787373 ---TTTTT i rheMac8.chr2 I 3 C 0 s macFas5.chr2 61012450 5 - 192460366 ---TTTTT i macFas5.chr2 I 3 C 0 s macNem1.NW_012018021v1 11124691 5 - 17224310 ---TTTTT i macNem1.NW_012018021v1 I 3 C 0 s cerAty1.NW_012009469v1 17436562 5 - 41321030 ---TTTTT i cerAty1.NW_012009469v1 I 3 C 0 s chlSab2.chr22 64508159 5 - 101219884 ---TTTTT i chlSab2.chr22 I 3 C 0 s manLeu1.NW_012098965v1 893984 5 - 924385 ---TTTTT i manLeu1.NW_012098965v1 I 3 C 0 s colAng1.NW_012114711v1 6735022 5 - 10587913 ---TTTTT i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46069887 5 - 98464013 ---TTTTT i calJac3.chr15 I 3 C 0 s saiBol1.JH378290 2554615 5 - 2763108 ---TTTTT i saiBol1.JH378290 I 3 C 0 s cebCap1.NW_016107467v1 279001 5 - 4835464 ---TTTTT i cebCap1.NW_016107467v1 I 3 C 0 s aotNan1.NW_018502033v1 3744932 5 + 4093027 ---TTTTT i aotNan1.NW_018502033v1 I 3 C 0 s micMur3.chr32 1633431 5 - 9149476 ---TTTTT i micMur3.chr32 I 4 C 0 s proCoq1.NW_012148064v1 631961 5 + 2414909 ---TTTTT i proCoq1.NW_012148064v1 I 7 C 0 s otoGar3.GL873534 11082115 5 + 30473821 ---TTTTT i otoGar3.GL873534 I 4 C 0 s mm10.chr6 45789437 5 - 149736546 ---TTTTT i mm10.chr6 I 3 C 0 s canFam3.chr20 16616208 5 + 58134056 ---TTTTT i canFam3.chr20 I 3 C 0 s dasNov3.JH563077 1871628 7 - 2187301 TGATTTT- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572310 634 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248325 635 - 2311269 I e tarSyr2.KE939134v1 190231 1905 + 958716 I a score=17908.000000 s hg38.chrUn_KI270749v1 127434 1 + 158759 T s panTro5.chr3 202014621 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782646 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12616 1 - 17846 T i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599358 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080607 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61012455 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11124696 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17436567 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64508164 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893989 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735027 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46069892 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554620 1 - 2763108 T i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 279006 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744937 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 192136 1 + 958716 T i tarSyr2.KE939134v1 I 1905 I 979 s micMur3.chr32 1633436 1 - 9149476 C i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 631966 1 + 2414909 T i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11082120 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45789442 1 - 149736546 C i mm10.chr6 C 0 C 0 s canFam3.chr20 16616213 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1871635 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572310 634 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248325 635 - 2311269 I a score=4758201.000000 s hg38.chrUn_KI270749v1 127435 300 + 158759 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCCTTAATATGGAATATCCCTCGGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCATACACTCCTCCAAAGT-GTTCATTG-----TTCAAAGA--------AACTCAA--GTGAAAATA-----AGGTATGAAATCCTCATGTGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATCT---GTTTTTTTC-------TAGCACAAAGAAAACATATCGGAAATATTAAAGTGAGCATAA s panTro5.chr3 202014622 300 - 202621043 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCCTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCATACACTCCTCCAAAGT-GTTCATTG-----TTCAAAGA--------AACTCAA--GTGAAAATA-----AGGTATGAAATCCTCATGTGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATCT---GTTTTTTTC-------TAGTACAAAGAAAACATATCGGAAATATTAAAGTGAGCATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782647 300 - 205426864 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCCTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCATACACTCCTCCAAAGT-GTTCATTG-----TTCAAAGA--------AACTCAA--GTGAAAATA-----AGGTATGAAATCCTCATGTGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATCT---GTTTTTTTC-------TAGTACAAAGAAAACATATCGGAAATATTAAAGTGAGCATAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12617 300 - 17846 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCCTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAGTCTAATAAATTCCTAATATAGCATACACTCCTCAAAAGT-GTTCATTG-----TTCAAAGA--------AACTCAA--GTGAAAATA-----TGGTATGAAATCCTCATGTGCACAGAGAGATAAAGATAAATGCAGCATTTTAAAAATATCT---GTTTTTTTC-------CAGTACAAAGAAAACATATCGGAAATATTAAAGTGAGCATAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599359 296 + 86207423 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCCTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCTCATATAGCATACACTCC---AACGT-GTTCATTG-----TTCAAAGA--------AACTCAA--GTGAAAATA-----AGGTATGAAATCCTCATATGCACAGAGAGATAAAGATAAATGCGGCATTTTTAAAATATCC----TTTTTTTC-------TAGTACAAAGAAAACATATCAGAAATTTTAAAGTGAGTATAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080608 298 + 204787373 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTTTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGT-GTGCATTG-----TCCAAAGA--------AACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATC-----TTTTTTTC-------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61012456 298 - 192460366 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTTTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGT-GTGCATTG-----TCCAAAGA--------AACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATC-----TTTTTTTC-------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11124697 298 - 17224310 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTTTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGT-GTGCATTG-----TCCAAAGA--------AACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATC-----TTTTTTTC-------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17436568 298 - 41321030 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTTTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGT-GTGCATTG-----TCCAAAGA--------AACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATC-----TTTTTTTC-------TAGTACAAAGAAAACATATCAGACATATTAAAGTGAGCATAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64508165 297 - 101219884 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTCTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGT-GTTCATTG-----TCCAAAGA--------AACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATAT------CTTTTTTC-------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893990 298 - 924385 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTTTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGT-GTGCATTG-----TCCAAAGA--------AACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATG-----TTTTTTTC-------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735028 298 - 10587913 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTCTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGAATACACTCCTCCAAAGT-GTTCATTG-----TCCAAAGA--------AACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGAACAGAGAGATAAAGATAAATGCAGCATTTTAAAAATATA-----TTTTTTTC-------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46069893 300 - 98464013 AGCAAAAGAAAATAATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCTTTACTATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCAGCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCTTATACTTCTCCAAAGT-GTTCATTG-----TTCAAAGA--------AACTAAA--GTGAAAATA-----AGGTATGCAATCCTCATATGCACAGAGAGATAAAGATAAGTGCAGCATGTTTTAAATATCT---GGTTTCTTC-------TAGTACAAGGGAAACATATCAAATATATTAAAATGAGCATAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554621 300 - 2763108 AGCAGAAACAAATAATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCTTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCAGCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCTTATACTTCTCCAAAGT-GTTCATTG-----TTCAAAGA--------AACTAAA--GTGAAAATA-----AGGTATGAAATCCTCATATGCACAGAGAGATAAAGATAAGTACAGCATATTTTAAATATCT---GGTTTCTTC-------TAGTACAAAGGAAATATATCAAATATATTACACTGAGCATAA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 279007 300 - 4835464 AGCAAAAACAAATAATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCTTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCAGCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCTTATACTTCTCCAAAGT-GTTCATTG-----TTCAAAGA--------AACTAAA--GTGAAAATG-----AGGTATGAAATTCTCATATGCACAGAGAGATAAAGATAAGTGCAGCATGTTTTAAATATCT---GGTTTCTTC-------TAGTACAAAGGAAACATATCAAATATATTAAAATGAGCGTAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744938 300 + 4093027 AGCAAAAACAAATAATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCTTTAATATGGAATATCCCTCAGGTCTCCTTTGTGGAAACAAAATTCATAACCAGCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCTTATACTTCTCCAAAGT-GTTCATTG-----TTCAAAGA--------AACTAAA--GTGAAAATA-----GGGTATGAAATCCTCATATGCACAGAGAGATAAAGATAAGTGCAGCATGTTTTAAATATCT---GGCTTCTTC-------TAGTACAAAGGAAACATATCAAATATATTAAAGTGAGCATAA i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1633437 300 - 9149476 AGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAGT-AAAGCCTTTAATATGGAATATCCCCCAGGTCTCC--TTTGGAAACAAAATTCATAACCACCTGCCATTTGATAAAATCTAATAAATTCCTAACATAGCATACATTTCTCCAAAGC-ATTCACTGGCATTCTCAAAAC--------AAAAAAA--GTGGAATAG-----AGGTATGGAATCCTCATCTGCACAGACAGATAAAGATAAATGCAGTATGTTTTAAAGATGT---GTTTCTTTC-------TAATAGAAATAAA---CATCAGAAATATTAAAGTGAACATAA i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 631967 301 + 2414909 AGTAAAAACAAATGATTTGCATGTTTCCACCAACAGGGAGT-AAAGCCTTTAATATGGAATATCCCTCAGGTCTCCCTTTTGGAAACAAAATTCATAACCACCTTCCATTTGATAAAATCTAATAAATTCCTAATATAGCATACATTTCTCCAAAGC-TTTCATTGACATTCTCAAAAC---------AAAAAA--GTGGAATGG-----AAATATGGAATCCTCATCTGCACAGACAGATAAAGATAAATGCAGCATGTTTTAAAGATAC---GTTTCTTTG-------TAATAGAAATAAA---CATCAGAAATATTAAAGTGAACATAA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11082121 312 + 30473821 -GCAAAAATAAATGATTTGCATTTTTTCACCAAAAGGGAAC-AAAGCCTTTAATAAGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGTCACTTGATGAAATCTAATAAATGTATAACATAGCATGCATTTTTCCAAAGCGTTTCATTGGCATTTTCAAAACAAAAAAAAAAAAAAA--GGGGAAAGG-----AGGTACAGAATTCTCATCTGTGCAGATAGATAAAGATAAATGTGGTTTGTTTTAAGTCTGT---ATTTCTTTC-------AACTAGAAATAAA-TGTATCAGAAATACTAAAGCAAACACAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45789443 302 - 149736546 AGCAAAAACAAATAATTTGCATTTTTGTACCAAAGGGGAAT-AAAACCTTTAATATGTAATGTCCCTCAGGTCTCCTTTTTGGAAATGAAATTCATAACCACCTGCCATTTGATGAAG-CTAGTAAATTCCTGATATAGTATACACTTCTCCAAAGT-ATTTGCTGGCATTTTCAAAAC--------AGCTAAT--CAAAAAGTAAGTGTAGACGTAGGAGTCTCACA-GTCCAGAGGG--AAGAATAAATGCAATATGCTTTAAATGAAT---GGTTGT----------CAGTA-ACAGAAAATGTACCTGGAATATTAATGTATAAATAA i mm10.chr6 C 0 N 0 s canFam3.chr20 16616214 306 + 58134056 AGCAAAAGCAAATGATTTGCATGTTTCTACCAAAAGGGAAT-AAAGCCTTTAATATGGAGTATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGACGAAATCT----AATTGCTAATACAGCGTACACTTCTGCAAAGT-GTTCACTGGCATTTTCaaaaa--------aaaaaaattttaaaaataGAG--AGGCATGCTAGCCTCATCTACACAGAAAGAGAATGACAAATGTAGCATGTTTTTGGTGTAT-GTGTTTTTTCC-------TATTAGAAACAAAACATACCAGAAATAT--AAGTGAGCATGA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1871636 307 - 2187301 GGTAAAAACAAATGATTTGCATGTTTCCACCAGAAGGGAATGAAAACCTTTAATATGGAATATCCCTCAGGTCTCCTTTTAGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCAAATACAGTATACACATCTCCAAAGT-ATTCATTGGTATTATCAAAAA-----------------ATGAAAAGG-----AGGCAGAGAAACCTCATCTACACAGA--GATAAGAATAAAAGTAGAATGTTTTATATTTGTGGGGTTTTCCCCTTTACATTACTACAAAGAAAACATACCAAAAAAATTAAAATGAGAATTA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572310 634 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248325 635 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I a score=2589144.000000 s hg38.chrUn_KI270749v1 127735 187 + 158759 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATGCTACCAGGTAGACTCACACATTTCCTT-AATGGGTGTAAAATTTATTAACAACATTTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAACCCTGTGTTTTGATTCATGACATTTTATTCCTATTATTTATCCAAAGGGTA--------------------------ATTAAAATTT s panTro5.chr3 202014922 187 - 202621043 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATACTACCAGGTAGACTCATACACTTCCTT-AATGGGTGTAAAATTTATTAACAACATTTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAACCGTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATGCAAAGGGTA--------------------------ATTAAAATTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782947 187 - 205426864 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATTCTACCAGGTAGACTCACACACTTCCTT-AATGGGTGTAAAATTTATTAACAACATTTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAACCCTTTGTTTTGATTCATGCCATTTTATTCCTATTATTTATGCAAAGGGTA--------------------------ATTAAAATTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12917 187 - 17846 TTTCATCCCACAGCCATAG-TTTCAACTATACTTTAATTCTACCAGGTAGACTCACACACTTCCTT-AATGGGTGTAAAATTTATTAACAACATTTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAACCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGGGTA--------------------------ATTAAAATTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599655 187 + 86207423 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATTCTACCAGGTAGACTCACACACTTCCTT-AATGGGTGTAAAATTTATTAACAACCTTTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAACCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTACCCAAAGGGTA--------------------------ATTAAAATTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080906 187 + 204787373 TTTCATCCCACAGCAACAG-TTTCAACTATACTTTAATTCTAGCTGGTAGACTCAGACACTTCCTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATA--------------------------ATTAAAATTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61012754 187 - 192460366 TTTCATCCCACAGCAACAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCTTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATA--------------------------ATTAAAATTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11124995 187 - 17224310 TTTCATCCCACAGCAACAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCCTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTATGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATA--------------------------ATTAAAATTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17436866 187 - 41321030 TTTCATCCCACAGCAACAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCCTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATA--------------------------ATTAAAATTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64508462 187 - 101219884 TTTCATCCTACAGCAATAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCCTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATA--------------------------ATTAAAATTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 894288 187 - 924385 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCCTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATA--------------------------ATTAAAATTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735326 187 - 10587913 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCCTT-AATGGGTGTGAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTGTA--------------------------ATTAAAATTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46070193 187 - 98464013 TTTCATCCCACAGTAATAG-TTTCAACTATACTTTAATTCTACCAGGTAGACACAGGCACTTCCTTAAATGGGGGTAAACTTTATTAATAA-CTTTTAGTTCTGTTTTTCATTGAGAATA-TGCATAAATCCTATGCTTTGACTCATGCCATTTTATTCCTATTATTTATCCAAAGTGTA--------------------------ATGAAAATTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554921 188 - 2763108 TTTCACCCCACAGTAATAG-TTTGAACTATACTTTAATTCTACCAGGTAGACACAAGCACTTCCTTAAATGGGGGTAAACTTTATTAATAACCTTTTAGTTCTGTTTTCCATTGAGAATA-TGCATAAATCCCATGCTTTGACTCATGCCATTTTATTCCTATTATTTATCCAAAGTGTG--------------------------ATGAAAATTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 279307 187 - 4835464 TTTCATCCCACAGTAATAG-TCTCAACTATACTTTAATTCTGCCAGGTAGACACAAGCACTTCCTTAAACGGGGGTAAACTTTATTAATAACCTTTTAGTTTTGTTTTTCATTGAGAATA-TGCATAAATCCTGTGCTTTGACTCATGCCATTTTATTCCTATTATTTATCCAAAGTGTA--------------------------ACG-AAATTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3745238 188 + 4093027 TTTCATCCCACAGTAATAG-TTTCAACTATACTTTAATTCTATCAGGTAGACACAAGCACTTCCTTAAATGAAGGTAAACTTTATTAATAACCTTTTAGTTCTGTTTTTCATTGAGAATA-AGCATAAATCCAATGCTTTGACTGATGCCATTTTATTCCTATTATTTATCCAAAGTGCA--------------------------ATGAAAATTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1633737 171 - 9149476 -------------TAATAG-TTTCAACTATACTTTTACTCTACCAGGTAGATTCAAACACTTTTTAAAATGGGTGTTAACTTTATTCATAACTTTTTCGTTCTGTTTTT-ATAGAGAATA-TGCATAAATACTGTGCTTTGATTCATGCTGTTTTATTTCTATTATTTATCCAATGCATA-------------------------TGTT----TTT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 632268 187 + 2414909 TTTCTTCCCACAGTAATAG-TCTCAACTGTACTTTTACTCTACCAAGTAGATTCAAACACTTTTTTAAATGGGTGTTAACTTTATTAATAACTTTTTAATTCTGTTTTT-ATAGAGAATA-TGCATAAATATTGTGCTTTGATTCATTCTGTTTTATTTCTATTATTTATCCAACACATA--------------------------GTTAAAATTT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11082433 203 + 30473821 TCTCTTCCCACAGTTATAG-TTGTGACTGAATTTTAACTCTCCTAG--------AGTTACTTTTTAAAACGAGTGTCAACTTTGCTCACAACTTTTTAGTTCTGCTTTT-ATAGATCATA-TGCATAAATAGAGTTCTCTGAGTCATCTGCTTTTATTTCTATTGTTCATACAATGCATGGTGATTTTTGTTTTGTTGTTGTTGCTGTT--GCTTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16616520 173 + 58134056 TTTCTTCCCTCAGTAATAG-CTTTAACTAAAC-----------CAGACAGATTCA---ATTTTTTA-AATGGGTGTCAACTCTATTCATAACCTTTCAGTTTGGTTTTTCACAAGGAATA-TGCATAAATACTGCACTTTGTCTCATGCTGTGTTATTCTTATTATTTATACTATGCATA--------------------------ATTAAAATTT i canFam3.chr20 C 0 I 206 s dasNov3.JH563077 1871943 189 - 2187301 TTTCTTCCCACAGCAGTAGACTTTATCTATACTTTAACTGTAGCAGCCAAATTCAAACCATTTTTA-AATTGGTGTCAACTTTATTTATAACCTTTCATTTCTGTTTTTCACAGAGAATACTATGTAAAAACGGTGCTTTGACTCATGCTGTTTTATTCCTATTATTTATCCAATGCCTA--------------------------ATTAAAATTT i dasNov3.JH563077 C 0 I 204 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572310 634 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248325 635 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I a score=1815639.000000 s hg38.chrUn_KI270749v1 127922 125 + 158759 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGACCCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA s panTro5.chr3 202015109 125 - 202621043 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGACCCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783134 125 - 205426864 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGACCCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13104 125 - 17846 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGACCCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599842 125 + 86207423 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGACCCATTAAGTAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGGAAAGCTGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081093 125 + 204787373 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAGGTTA-TTGATGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTAGAGAAAAATATTCTATGCATAGAAAAGCTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61012941 125 - 192460366 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAGGCTA-TTGATGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTAGAGAAAAATATTCTATGCATAGAAAAGCTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125182 125 - 17224310 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAGGTTA-TTGATGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTAGAGAAAAATATTCTATGCATAGAAAAGCTGA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437053 125 - 41321030 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAGGTTA-TTGATGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTAGAGAAAAATATGCTATGCATAGAAAAGCTGA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64508649 125 - 101219884 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGATGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 894475 125 - 924385 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAGGTTA-TTGATGCATTAAATAGTTAAATGAA---AAGCACCTTCACAG-----ATGTTTGGTAGAGAAAAATATGCTATGCATAGAAAAGCTGA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735513 125 - 10587913 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAAGTTA-TTGACGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46070380 124 - 98464013 CTCTTTTGATTATGTAGATGGAATATGGAAATATAAGGGAGGCTA-TTGACTCATTAAATGGTTAAATGAA---AATCTC-TTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCGAAACACAGCTGA i calJac3.chr15 C 0 I 3 s saiBol1.JH378290 2555109 125 - 2763108 CTTTTTTGATTATGTAAATAGAATATGGAAATATAAGGGAAGTTA-TTGACTCATTAAATGGTTAAATGAA---AATCACTTTCACAG-----ATGTTTTGTGGAGAAAAATATGCTATGTGAAACACAGCTGA i saiBol1.JH378290 C 0 I 3 s cebCap1.NW_016107467v1 279494 126 - 4835464 CTTTCTTGATTATGTAAATGGAATATGGAAATATAAGGGAGGTTATTTGACTCATTAAATAGTTAAATGAA---AATCATTTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCGAAACACAGCTGA i cebCap1.NW_016107467v1 C 0 I 3 s aotNan1.NW_018502033v1 3745426 125 + 4093027 CTTTTTTGATTATGTAGATGGAATATGGAAATATAAGCGAGGTTA-TTGACTCATTAAATGGTTAAATGAA---AATCACTTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCAAAACACAGCTGA i aotNan1.NW_018502033v1 C 0 I 3 s micMur3.chr32 1633908 124 - 9149476 TTTTACTGATGATATAGAGGGAATTTGGAAATAGAAGGGAGGTTA-TTGACTCTTTAAATAGTTAAATAAA---GATCACCTTCACAG-----GTGTTTGGGG-AGAAAAATACACCATGCACAGAGAAGCTGA i micMur3.chr32 C 0 I 3 s proCoq1.NW_012148064v1 632455 124 + 2414909 TTTTATTGATGTTATAGATGGAATCTTG-AATAAAAGGGAGGTTA-TTGACTCTTTAAATAGTTAAATGAA---GATCATTTTCACAG-----GTATTTGGGGAAGAAAAATATACCATGCACAGAAAACCTGA i proCoq1.NW_012148064v1 C 0 I 3 s otoGar3.GL873534 11082636 125 + 30473821 TCTTACTGATAGTGTAGGTGGAGTCTTGAAATAAAAGGGAGGTGA-TAGACTCTTTAAATGGTTAAATAAA---GATCACTTGCACAG-----GTGTTTGGGGGAGAAAAATATTCCATGCACTGAAAAGTGGG i otoGar3.GL873534 C 0 I 3 s canFam3.chr20 16616899 123 + 58134056 CTTTCCTGATAACATAGGCTGAATTTTGCAATAGAAGGGAGGTTA-CTGACTCATT-AGTGGTTAAATAAA---GACCACCTAAAAAG-----GTGTTTGGGAGAGAAAAAC-TGCCACGCCCAGAAAAGCTGA i canFam3.chr20 I 206 C 0 s dasNov3.JH563077 1872336 132 - 2187301 CTTTACTGATAACATAGATGGAATTTGGAAATAGAAGGGAGGTTA-CTGAACCACACAGTGGCTAAATACAGCCAGATACCCAACCAGAAGGTATGTTTGGAGAAG-AAAATATGCCATGCACAGAAAAGCTGA i dasNov3.JH563077 I 204 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572310 634 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248325 635 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I a score=21021.000000 s hg38.chrUn_KI270749v1 128047 1 + 158759 A s panTro5.chr3 202015234 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783259 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13229 1 - 17846 A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599967 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081218 1 + 204787373 A i rheMac8.chr2 C 0 I 3 s macFas5.chr2 61013066 1 - 192460366 A i macFas5.chr2 C 0 I 3 s macNem1.NW_012018021v1 11125307 1 - 17224310 A i macNem1.NW_012018021v1 C 0 I 3 s cerAty1.NW_012009469v1 17437178 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64508774 1 - 101219884 A i chlSab2.chr22 C 0 I 3 s manLeu1.NW_012098965v1 894600 1 - 924385 A i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6735638 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1248960 1 - 2311269 A i rhiBie1.NW_016820128v1 I 635 C 0 s calJac3.chr15 46070507 1 - 98464013 A i calJac3.chr15 I 3 C 0 s saiBol1.JH378290 2555237 1 - 2763108 A i saiBol1.JH378290 I 3 C 0 s cebCap1.NW_016107467v1 279623 1 - 4835464 A i cebCap1.NW_016107467v1 I 3 C 0 s aotNan1.NW_018502033v1 3745554 1 + 4093027 A i aotNan1.NW_018502033v1 I 3 C 0 s micMur3.chr32 1634035 1 - 9149476 A i micMur3.chr32 I 3 C 0 s proCoq1.NW_012148064v1 632582 1 + 2414909 A i proCoq1.NW_012148064v1 I 3 C 0 s otoGar3.GL873534 11082764 1 + 30473821 A i otoGar3.GL873534 I 3 C 0 s canFam3.chr20 16617022 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872468 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572310 634 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e tarSyr2.KE939134v1 192137 979 + 958716 I a score=46046.000000 s hg38.chrUn_KI270749v1 128048 2 + 158759 AT s panTro5.chr3 202015235 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783260 2 - 205426864 AT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13230 2 - 17846 AT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599968 2 + 86207423 AT i nomLeu3.chr21 C 0 I 3 s rheMac8.chr2 66081222 2 + 204787373 AT i rheMac8.chr2 I 3 C 0 s macFas5.chr2 61013070 2 - 192460366 AT i macFas5.chr2 I 3 C 0 s macNem1.NW_012018021v1 11125311 2 - 17224310 AT i macNem1.NW_012018021v1 I 3 C 0 s cerAty1.NW_012009469v1 17437182 2 - 41321030 AT i cerAty1.NW_012009469v1 I 3 C 0 s papAnu3.chr2 59572944 2 + 187378091 AT i papAnu3.chr2 I 634 C 0 s chlSab2.chr22 64508778 2 - 101219884 AT i chlSab2.chr22 I 3 C 0 s manLeu1.NW_012098965v1 894604 2 - 924385 AT i manLeu1.NW_012098965v1 I 3 C 0 s colAng1.NW_012114711v1 6735639 2 - 10587913 AT i colAng1.NW_012114711v1 C 0 I 3 s rhiBie1.NW_016820128v1 1248961 2 - 2311269 AT i rhiBie1.NW_016820128v1 C 0 I 348 s calJac3.chr15 46070508 2 - 98464013 AT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2555238 2 - 2763108 AT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 279624 2 - 4835464 AT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3745555 2 + 4093027 AT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1634036 2 - 9149476 AT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 632583 2 + 2414909 AT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11082765 2 + 30473821 AT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617023 2 + 58134056 AT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872469 2 - 2187301 AT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e tarSyr2.KE939134v1 192137 979 + 958716 I a score=6975.000000 s hg38.chrUn_KI270749v1 128050 1 + 158759 G s panTro5.chr3 202015237 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783262 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13232 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599973 1 + 86207423 G i nomLeu3.chr21 I 3 C 0 s rheMac8.chr2 66081224 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013072 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125313 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437184 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59572946 1 + 187378091 A i papAnu3.chr2 C 0 I 358 s chlSab2.chr22 64508780 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 894606 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735644 1 - 10587913 G i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46070510 1 - 98464013 G i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2555240 1 - 2763108 G i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 279626 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3745557 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1634038 1 - 9149476 G i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 632585 1 + 2414909 G i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11082767 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617025 1 + 58134056 A i canFam3.chr20 C 0 I 5 s dasNov3.JH563077 1872471 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248963 348 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I a score=3702157.000000 s hg38.chrUn_KI270749v1 128051 261 + 158759 ----TTTTTACACAAATG-TTAGGCATTGGGCTG-AAATTACAATAGCCTTTCATGTCCAGTTTT----------------------------------------------------------GTTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAG--CT--GTTACCataggagagtcaccatatgtaatatagtttgtgctagtcattgtgtaagcattttatatacattctctcattgacacatttaacagcctgtgaagttcctattttattcccacctcacatactgagaaactacagctcagagaaacaaagtaa s panTro5.chr3 202015238 261 - 202621043 ----TTTTTCCACGAATG-TTAGGCATTGGGCTG-AAATTACAATAGCTTTTCATGTCCAGTTTT----------------------------------------------------------GTTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAG--CT--GTTACCataggagagtcaccatatgtaatacagtttgtgctagtcattgtgtaagcattttatatacattctctcattgacacatttaacagcctgtgaagttcctattttattcccacctcacatattgagaaactacagctcagaaaaacaaagtaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783263 261 - 205426864 ----TTTTTCCACGAATG-TTAGGCATTGGGCTG-AAATTACAATAGCTTTTCATGTCCAGTTTT----------------------------------------------------------GTTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAG--CT--GTTACCataggagagtcaccatatgtaatacagtttgtgctagtcattgtgtaagcattttatacacattctctcattgacacatttaacagcctgtgaagttcctattttattcccacctcacatattgagaaactacagctcagaaaaacaaagtaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13233 261 - 17846 ----TTTTTCCACGAATG-TTAGGCATTGGGCTG-AAATTACAATAGCCTTTCATGTCCAGTTTT----------------------------------------------------------GTTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAG--CT--GTTACCataggagagtcaccatatgtaatatagtttgtgctagtcattgtgtaagcattttatatacattctctcattgacacatttaacagcctgtgaagttcctattttattcccacctcacatattgagaaactacagctcagagaaacaaagtaa i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599974 261 + 86207423 ----TTTTTCCACGAATA-TTAGGCATTGGGCTG-AAATTACAATAGCCTTTCATGTCCAGTTTT----------------------------------------------------------GTTATAATCCCATTAAGGCAACTGCAGAGATTGGTAAATAG--CT--GTTACCataggagagtcaccatatgtaatatagtttgtgctagacattgtgtaagcattttatatacattctctcattgacatatttaacagcctgtgaagttcctattttattcccacctcacatattgagaaactacagctcagagaaacaaagtaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081225 261 + 204787373 ----TTTTTCCATGAATA-TTGGGCATTGGGCTG-AAATTACAATAGCCTTTCACGTCCAGTTTT----------------------------------------------------------ATTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAA--CT--GTTACCATAGGAAAGTCACCATATGTAATAtagtttatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013073 261 - 192460366 ----TTTTTCCATGAATA-TTGGGCATTGGGCTG-AAATTACAATAGCCTTTCACGTCCAGTTTT----------------------------------------------------------ATTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAA--CT--GTTACCATAGGAAAGTCACCATATGTAATAtagtttatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125314 262 - 17224310 ----TTTTTCCATGAATA-TTGGGCATTGGGCTGAAAAATACAATAGCCTTTCACGTCCAGTTTT----------------------------------------------------------ATTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAA--CT--GTTACCATAGGAAAGTCACCATATGTAATATAGTTtatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437185 261 - 41321030 ----TTTTTCCATGAATA-TTGGGCACTGGGCCA-AAATTACAATAGCCTTTCACGTCCAGTTTT----------------------------------------------------------ATTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAA--CT--GTTACCATAGGAAAGTCACCATATGTAATATAGTTtatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64508781 261 - 101219884 ----TTTTTCCATGAATA-TTGGGCCTTGGGCTG-AAATTACAATAGCCTTTCACGTCCAGTTTT----------------------------------------------------------ATTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAA--CT--GTTACCataggagagtcaccatatgtaatatagtttatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacatcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 894607 319 - 924385 ----TTTTTCCATGAATA-TTGGGCATTGGGCCG-AAATTACAATAGCCTTTCACGTCCAGTTTTATTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAACTGTTACCATAGGAAAGATTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAA--CT--GTTACCATAGGAAAGTCACCATATGTAATAtagtttatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735645 261 - 10587913 ----TTTTTCCATGAATA-TTGGGCATTGGGCTG-AAATTACAATAGCCTTTCATGTCCAGTTTT----------------------------------------------------------GTTACAATCCCATTAAGGCAACTGCAGAGATTGGTAAATAA--CT--GTTACCataggagagtcaccatatgtaatatagtttatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaaatttctgttttattcctatctcacatattgagaaactatagttcagagaaataaagtaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46070511 258 - 98464013 ----TTTTCCCATGAATA-TTTGGCACTGGGCTG-AAATTACAATAGCCTGTCACGT-CAGTTTT----------------------------------------------------------GTTATAATTCCATTAAGGTAACTACAGAGATTGGTAAATAA--CT--GTTACAACAGGagagtcaccatatgtaatataatttgttctagacattgtgtaagaattttatatacattctctcattgactcattt-acagcctgtgaag-tgttattttgttcccacctcacatatcgagaaaatacagctcagagaaactaagtaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2555241 260 - 2763108 ----TTTTCCCATAAATA-TTTGGCACTGGGCTG-AAATTACAATAGCTTTTCACGTCCAGTTTT----------------------------------------------------------GTTATAATTCCATTAAGGTAACTACAGAGATTGGTAAATAA--CT--GTTACAACAGGagagtcaccatatgtaatataatttgttctagacattgtgtaagaattttatatacgttgtctcattgactcatttaatagcctgtgaag-tcttattttattcccacctcacatattgagaaactacagctcagagaaactaagtaa i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 279627 260 - 4835464 ----TTTTCCCGTGAATA-TTTGGCATTGGGCTG-AAATTACAATAGTCTTTCACGTCCAGTTTT----------------------------------------------------------GTTATAATTCCATTAAGGTAACTAAAGAGATTGGTAAATAA--CT--GTTACAACAGGGGAGTCACCATGTGTAATATAATTtgttctagacattgtgtaagaattttatatacattgtctcattgactcatttaacagcctgtgaag-tcttattttattcccacctcacatattgacaaaatacagctcaaagaaactagataa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3745558 260 + 4093027 ----TTTTCCCATGAATA-TTGGGCATTGGGTTG-AAATTACAACAGCCTTTCATGTCCAGTTTT----------------------------------------------------------GTTATAATTCCATTAAGGTAACTACAGAGATTGGTAAATAA--CT--GTTACAACAGGagagtcaccatatgtaatataatttgttctagacattgtgtaagaatttcatatacattctctcattgactcatttaacagcctgtgaag-tcttattttattcccacctcacatactgagaaaatacagctcagagaaactaagtaa i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1634039 261 - 9149476 ----TTTTTCCCTAAGTG-CTGGGCACTGGGCTG-AAATTACAACAGCCTTCCGTGTTCAGTTCT----------------------------------------------------------GTTACAATTCCATTAAGGCAGCTGCAGAGATTGGGAAATAG--CC--ATTATCATAGAAAAGTGACCGcatttattatactttgtgctagatattgtgtaagcatgttatgtacattatttcattcacttctttaaccacctatgagattcttattttatttccacctcacacattgagagactaaagctcagagaagttaagtac i micMur3.chr32 C 0 I 123 s proCoq1.NW_012148064v1 632586 261 + 2414909 ----TTTTTCCGTAAGTG-TTGGGCACTGGGCTG-ATATTACAACAGCCTTCCACGTTCAGCTCT----------------------------------------------------------GTTACAATTCCATTGAAGCAACTGCAGAGATTGGTAAATAG--CC--ATTATTATAGAAAAGTGACCATATTTACTAtactttgtgctagatattatgtaagcatgttatgtacattatttcattgacttctttaacaacctatcaagttcttattttatttccacctcacatattgagagactaaagctcagagaagttaagtaa i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11082768 240 + 30473821 ----TTTTATCCTAAGAG-GGGAGCACTGGGCTG-AAATGACCACAACCATTCGTGTTCTGTTCT----------------------------------------------------------GTTA--------------------TAGAGACTAGTAAGTAG--TT--GTTCCCatagaagagtgaccatatttagtgctctttgtgttagatattgtataagcatgctatatacagtaattcactgactcatttaataatctatacaggtcttattttacttccatct-gcatattgagaaactaaagctcagagaagttaagtaa i otoGar3.GL873534 C 0 I 9 s canFam3.chr20 16617031 262 + 58134056 ----TATTTCCATAAATA-TTGAATATTGAACTG-AAATAACATCAGCCTTTTATGTCCAGTTCT----------------------------------------------------------GCTACCCTCCCATTATGGCAACTGCAGAGGTTAGTAAATGGTTCT--GTTTCTataggaaagtgaccatgtttgatatgctttatgctagaccttgtgtaaacattttaaatacattatctcactt-ctcttttaacagtctgtgaggtttataatttattcccatttcacaagtggagaaactaaaactaagaagaactgaataa i canFam3.chr20 I 5 C 0 s dasNov3.JH563077 1872472 265 - 2187301 ATGTTATTTTCAAAAATAGTTGGGTTTTGGAATG-AAAT-ACATCAGCCTTTCATGACCAGTTCT-----------------------------------------------------------CTAAATTACTGTTATAGTGA-TAAAGAAATTGATAAATAG--CTCAGTTACCATAGGAATGTGGCCATATTTATTACactttgccctagacattgtttaagcattttatatacatgatcttgtttacatttttaacaacccatgatgttcacattttcttccattcccacatagtgagaaatcaaatgtcagagaaaatgaataa i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572947 358 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248963 348 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I a score=649887.000000 s hg38.chrUn_KI270749v1 128312 61 + 158759 ACTGGGTTCCTACTTGAA-CCTAGTTTTTATGTACTATGCATGGTTTCATATGTTTACTGa------t s panTro5.chr3 202015499 61 - 202621043 ACTGAGTTCCTACTTGAA-CCTAGTTTTTATGTACTATGCATGGTTTCATATGTTTACTGa------t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783524 61 - 205426864 ACTGAGTTCCTACTTGAA-CCTAGTTTTTATGTACTATGCATGGTTTCATATGTTTACTGa------t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13494 61 - 17846 ACTGGGTTCCTACTTGAA-CCTAGTTTTTATGTACTATGCATGGTTTCATATGTTTACTGa------t i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600235 47 + 86207423 ACTGAGTTCTTACTTGAA-CCTAGTTTTTATGTCCTATGCATGGGTTC-------------------- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081486 60 + 204787373 ACTGAGCTCCTA-TTGAA-CCTAGTTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013334 60 - 192460366 ACTGAGCTCCTA-TTGAA-CCTAGTTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125576 60 - 17224310 ACTGAGCTCCTA-TTGAA-CCTAGTTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437446 60 - 41321030 ACTGAGCTCCTA-TTGAA-CCTAGTTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509042 60 - 101219884 ACTGAGCTCCTA-TTGAA-CCTAGTTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 894926 60 - 924385 ACTGAGCTCCTA-TTGAA-CCTAGTTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735906 60 - 10587913 ACAGAGCTCCTA-TTGAA-CCTAGTTTTTAAGTCCTACGCATGGGCTCATATGTTTACTGa------t i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46070769 67 - 98464013 ACTGAGTTCCTACTTGAA-CTTAGTTTTTATATCCTATGCAGGGGCTCATATGTTTACTGATGTGTGT i calJac3.chr15 C 0 I 4 s saiBol1.JH378290 2555501 61 - 2763108 ACTGAGTTCCTACTTGAA-CCTAATTTTTAGGTCCTATGCAGGTGCTCCTATGTTTACTGA------T i saiBol1.JH378290 C 0 I 4 s cebCap1.NW_016107467v1 279887 61 - 4835464 ACTGAGTTCCTACTTGAA-CCTAGTTTTTATGTCCTGTGCAGGGGCTCATATGTTTACTGA------T i cebCap1.NW_016107467v1 C 0 I 188 s aotNan1.NW_018502033v1 3745818 61 + 4093027 ACTGAGTTCCTACTTGAA-CCTAGTTTTTATGTCCTATGCAGGGGCTCATATGTTTACTGA------T i aotNan1.NW_018502033v1 C 0 I 334 s proCoq1.NW_012148064v1 632847 61 + 2414909 ACTGGGTTCATATCTAAA-CCTACTTTTTTTCTCCTATGCTTGGGCTTATATTTCAATTGA------C i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11083017 61 + 30473821 gttaagtaaatagctgaa-ccTATTTTTGGTCTCCTATGCTTGGGCTCATATTTCAAAAGA------C i otoGar3.GL873534 I 9 C 0 s canFam3.chr20 16617293 55 + 58134056 TCAGGGTTCATATTTGAA-CCCTGTTTTT--GATCTATTCTTAGACTCATGCTTCAAT---------- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872737 62 - 2187301 acagagttcacaTTTGAACCCTGCTCTTTATTTCCTATGCTTGGGCTCATTGTTCAACTGA------C i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e micMur3.chr32 1634300 123 - 9149476 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572947 358 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248963 348 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I a score=79671.000000 s hg38.chrUn_KI270749v1 128373 23 + 158759 atacatatataaaattttattta s panTro5.chr3 202015560 23 - 202621043 atacatatataaaattttattta i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783585 23 - 205426864 atacatatataaaattttattta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13555 23 - 17846 atacatatataaaattttattta i gorGor5.CYUI01007532v1 C 0 C 0 s rheMac8.chr2 66081546 23 + 204787373 atacatatataacgttttattca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013394 23 - 192460366 atacatatataacgttttattca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125636 23 - 17224310 atacatatataacgttttattca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437506 23 - 41321030 atacatatataacgttttattca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509102 23 - 101219884 atacatatataacgttttattca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 894986 23 - 924385 atacatatataacgttttattca i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735966 23 - 10587913 ataaatatataacattttattca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46070840 23 - 98464013 Gtatatatatatgtatttattat i calJac3.chr15 I 4 I 5 s saiBol1.JH378290 2555566 23 - 2763108 Gtatatatacatgtatttatttt i saiBol1.JH378290 I 4 I 5 s proCoq1.NW_012148064v1 632908 12 + 2414909 ----A--TAATAAACCTC----- i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11083078 14 + 30473821 ----ATGTGTGAAAATTC----- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617348 14 + 58134056 GGACATATATAGTA--------- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872799 1 - 2187301 ----A------------------ i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e micMur3.chr32 1634300 123 - 9149476 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572947 358 + 187378091 I e nasLar1.chr2 57740296 4158 + 181502896 I e ponAbe2.chr3 69669781 2919 + 202140232 I e rhiBie1.NW_016820128v1 1248963 348 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I e aotNan1.NW_018502033v1 3745879 334 + 4093027 I e cebCap1.NW_016107467v1 279948 188 - 4835464 I e nomLeu3.chr21 67600282 0 + 86207423 C a score=7847.000000 s hg38.chrUn_KI270749v1 128396 1 + 158759 t s panTro5.chr3 202015583 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783608 1 - 205426864 t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13578 1 - 17846 t i gorGor5.CYUI01007532v1 C 0 C 0 s rheMac8.chr2 66081569 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013417 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125659 1 - 17224310 t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437529 1 - 41321030 t i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509125 1 - 101219884 c i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895009 1 - 924385 t i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57744454 1 + 181502896 t i nasLar1.chr2 I 4158 C 0 s colAng1.NW_012114711v1 6735989 1 - 10587913 t i colAng1.NW_012114711v1 C 0 C 0 s rhiBie1.NW_016820128v1 1249311 1 - 2311269 t i rhiBie1.NW_016820128v1 I 348 C 0 s calJac3.chr15 46070868 1 - 98464013 t i calJac3.chr15 I 5 C 0 s saiBol1.JH378290 2555594 1 - 2763108 t i saiBol1.JH378290 I 5 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 632920 0 + 2414909 C e micMur3.chr32 1634300 123 - 9149476 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572947 358 + 187378091 I e ponAbe2.chr3 69669781 2919 + 202140232 I e tarSyr2.KE939134v1 192137 979 + 958716 I e otoGar3.GL873534 11083092 0 + 30473821 C e aotNan1.NW_018502033v1 3745879 334 + 4093027 I e cebCap1.NW_016107467v1 279948 188 - 4835464 I e canFam3.chr20 16617362 0 + 58134056 C e dasNov3.JH563077 1872800 0 - 2187301 C e nomLeu3.chr21 67600282 0 + 86207423 C a score=39951.000000 s hg38.chrUn_KI270749v1 128397 5 + 158759 atata s panTro5.chr3 202015584 5 - 202621043 atata i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783609 5 - 205426864 atata i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13579 5 - 17846 atata i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69672700 5 + 202140232 atata i ponAbe2.chr3 I 2919 I 305 s rheMac8.chr2 66081570 5 + 204787373 atata i rheMac8.chr2 C 0 I 8 s macFas5.chr2 61013418 5 - 192460366 atata i macFas5.chr2 C 0 I 8 s macNem1.NW_012018021v1 11125660 5 - 17224310 atata i macNem1.NW_012018021v1 C 0 I 8 s cerAty1.NW_012009469v1 17437530 5 - 41321030 atata i cerAty1.NW_012009469v1 C 0 I 8 s chlSab2.chr22 64509126 5 - 101219884 atata i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 895010 5 - 924385 atata i manLeu1.NW_012098965v1 C 0 I 8 s nasLar1.chr2 57744455 5 + 181502896 atata i nasLar1.chr2 C 0 I 315 s colAng1.NW_012114711v1 6735990 5 - 10587913 atata i colAng1.NW_012114711v1 C 0 I 14 s rhiBie1.NW_016820128v1 1249312 5 - 2311269 atata i rhiBie1.NW_016820128v1 C 0 I 315 s calJac3.chr15 46070869 5 - 98464013 atata i calJac3.chr15 C 0 I 5 s saiBol1.JH378290 2555595 4 - 2763108 atat- i saiBol1.JH378290 C 0 I 1 s dasNov3.JH563077 1872800 1 - 2187301 --A-- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 632920 0 + 2414909 C e micMur3.chr32 1634300 123 - 9149476 I e rhiRox1.KN296641v1 1393896 1419 - 1467263 I e papAnu3.chr2 59572947 358 + 187378091 I e tarSyr2.KE939134v1 192137 979 + 958716 I e otoGar3.GL873534 11083092 0 + 30473821 C e aotNan1.NW_018502033v1 3745879 334 + 4093027 I e cebCap1.NW_016107467v1 279948 188 - 4835464 I e canFam3.chr20 16617362 0 + 58134056 C e nomLeu3.chr21 67600282 0 + 86207423 C a score=51248.000000 s hg38.chrUn_KI270749v1 128402 6 + 158759 atatat s panTro5.chr3 202015589 6 - 202621043 atatat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783614 6 - 205426864 atatat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13584 6 - 17846 atatat i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600282 2 + 86207423 ----AT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081583 6 + 204787373 atatat i rheMac8.chr2 I 8 C 0 s macFas5.chr2 61013431 6 - 192460366 atatat i macFas5.chr2 I 8 C 0 s macNem1.NW_012018021v1 11125673 6 - 17224310 atatat i macNem1.NW_012018021v1 I 8 C 0 s cerAty1.NW_012009469v1 17437543 6 - 41321030 atatat i cerAty1.NW_012009469v1 I 8 C 0 s papAnu3.chr2 59573305 6 + 187378091 atatat i papAnu3.chr2 I 358 I 299 s chlSab2.chr22 64509132 6 - 101219884 atatat i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 895023 6 - 924385 atatat i manLeu1.NW_012098965v1 I 8 C 0 s colAng1.NW_012114711v1 6736009 6 - 10587913 atatat i colAng1.NW_012114711v1 I 14 C 0 s rhiRox1.KN296641v1 1395315 6 - 1467263 atatat i rhiRox1.KN296641v1 I 1419 I 298 s calJac3.chr15 46070879 6 - 98464013 ttttat i calJac3.chr15 I 5 I 79 s saiBol1.JH378290 2555600 6 - 2763108 ttttat i saiBol1.JH378290 I 1 I 218 s dasNov3.JH563077 1872801 6 - 2187301 ATATAG i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 632920 0 + 2414909 C e micMur3.chr32 1634300 123 - 9149476 I e nasLar1.chr2 57744460 315 + 181502896 I e ponAbe2.chr3 69672705 305 + 202140232 I e rhiBie1.NW_016820128v1 1249317 315 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I e otoGar3.GL873534 11083092 0 + 30473821 C e aotNan1.NW_018502033v1 3745879 334 + 4093027 I e cebCap1.NW_016107467v1 279948 188 - 4835464 I e canFam3.chr20 16617362 0 + 58134056 C a score=190021.000000 s hg38.chrUn_KI270749v1 128408 19 + 158759 tatatatataAAATAAACC- s panTro5.chr3 202015595 19 - 202621043 tatatatataAAATAAACC- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783620 19 - 205426864 tatatatataAAATAAACC- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13590 19 - 17846 tatatatataAAATAAACC- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600284 19 + 86207423 TATATATATAAAATAAACC- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081589 19 + 204787373 tatatatataAAATAAACC- i rheMac8.chr2 C 0 I 2 s macFas5.chr2 61013437 19 - 192460366 tatatatataAAATAAACC- i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11125679 19 - 17224310 tatatatataAAATAAACC- i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17437549 19 - 41321030 tatatatataAAATAAACC- i cerAty1.NW_012009469v1 C 0 I 2 s chlSab2.chr22 64509138 19 - 101219884 tatatatataAAATAAACC- i chlSab2.chr22 C 0 I 2 s manLeu1.NW_012098965v1 895029 19 - 924385 tatatatataAAATAAACC- i manLeu1.NW_012098965v1 C 0 I 2 s colAng1.NW_012114711v1 6736015 19 - 10587913 tatatatataAAAAAACCC- i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46070964 19 - 98464013 tatatatataAAATAAACC- i calJac3.chr15 I 79 I 2 s saiBol1.JH378290 2555824 19 - 2763108 tatatatataAAATAAACC- i saiBol1.JH378290 I 218 I 2 s cebCap1.NW_016107467v1 280136 19 - 4835464 tatatatatataataAAAC- i cebCap1.NW_016107467v1 I 188 I 2 s aotNan1.NW_018502033v1 3746213 19 + 4093027 tatatatataAAATAAACC- i aotNan1.NW_018502033v1 I 334 I 2 s canFam3.chr20 16617362 5 + 58134056 --------------AAACT- i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1872807 7 - 2187301 -------------TAAACCT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 632920 0 + 2414909 C e micMur3.chr32 1634300 123 - 9149476 I e rhiRox1.KN296641v1 1395321 298 - 1467263 I e papAnu3.chr2 59573311 299 + 187378091 I e nasLar1.chr2 57744460 315 + 181502896 I e ponAbe2.chr3 69672705 305 + 202140232 I e rhiBie1.NW_016820128v1 1249317 315 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I e otoGar3.GL873534 11083092 0 + 30473821 C a score=-2582.000000 s hg38.chrUn_KI270749v1 128427 1 + 158759 -A s panTro5.chr3 202015614 1 - 202621043 -G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783639 1 - 205426864 -G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13609 1 - 17846 -G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600303 1 + 86207423 -C i nomLeu3.chr21 C 0 C 0 s dasNov3.JH563077 1872814 1 - 2187301 C- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 632920 0 + 2414909 C e micMur3.chr32 1634300 123 - 9149476 I e rhiRox1.KN296641v1 1395321 298 - 1467263 I e papAnu3.chr2 59573311 299 + 187378091 I e nasLar1.chr2 57744460 315 + 181502896 I e ponAbe2.chr3 69672705 305 + 202140232 I e rhiBie1.NW_016820128v1 1249317 315 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I e otoGar3.GL873534 11083092 0 + 30473821 C e manLeu1.NW_012098965v1 895048 2 - 924385 I e macNem1.NW_012018021v1 11125698 2 - 17224310 I e rheMac8.chr2 66081608 2 + 204787373 I e aotNan1.NW_018502033v1 3746232 2 + 4093027 I e cebCap1.NW_016107467v1 280155 2 - 4835464 I e canFam3.chr20 16617367 1 + 58134056 I e saiBol1.JH378290 2555843 2 - 2763108 I e calJac3.chr15 46070983 2 - 98464013 I e colAng1.NW_012114711v1 6736034 1 - 10587913 I e chlSab2.chr22 64509157 2 - 101219884 I e cerAty1.NW_012009469v1 17437568 2 - 41321030 I e macFas5.chr2 61013456 2 - 192460366 I a score=278911.000000 s hg38.chrUn_KI270749v1 128428 20 + 158759 TAAAGTCAGAAATTTAGAAT s panTro5.chr3 202015615 20 - 202621043 TAAAGTCAGAAATTTAGAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783640 20 - 205426864 TAAAGTCAGAAATTTAGAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13610 20 - 17846 TAAAGTCAGAAATTTAGAAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600304 20 + 86207423 TAAAGTCAGAAATTTAGAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081610 20 + 204787373 TAAAGTCAGAAATTTAGAAT i rheMac8.chr2 I 2 C 0 s macFas5.chr2 61013458 20 - 192460366 TAAAGTCAGAAATTTAGAAT i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11125700 20 - 17224310 TAAAGTCAGAAATTTAGAAT i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17437570 20 - 41321030 TAAAGTCAGAAATTTAGAAT i cerAty1.NW_012009469v1 I 2 C 0 s chlSab2.chr22 64509159 20 - 101219884 TAAAGTCAGAAATTTAGAAT i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 895050 20 - 924385 TAAAGTCAGAAATTTAGAAT i manLeu1.NW_012098965v1 I 2 C 0 s colAng1.NW_012114711v1 6736035 20 - 10587913 TAAAGTCAGAAATTTAGAAT i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46070985 20 - 98464013 TAAAGTCAGACATTTAGAAT i calJac3.chr15 I 2 C 0 s saiBol1.JH378290 2555845 20 - 2763108 TAAAGTCAGACATTTAGAAT i saiBol1.JH378290 I 2 C 0 s cebCap1.NW_016107467v1 280157 20 - 4835464 TAAAGTCAGACATTTAGAAT i cebCap1.NW_016107467v1 I 2 C 0 s aotNan1.NW_018502033v1 3746234 20 + 4093027 TAAAGTCAGACATTTAGAAT i aotNan1.NW_018502033v1 I 2 C 0 s proCoq1.NW_012148064v1 632920 20 + 2414909 TAAAGTGAGAAATTTAGAAT i proCoq1.NW_012148064v1 C 0 I 19 s otoGar3.GL873534 11083092 20 + 30473821 TCAAGTGAGGAATTTGGAAT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617368 20 + 58134056 TAACGTGAGAAAATCGGAAT i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1872815 16 - 2187301 TCAAGTCAGAAATATT---- i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e micMur3.chr32 1634300 123 - 9149476 I e rhiRox1.KN296641v1 1395321 298 - 1467263 I e papAnu3.chr2 59573311 299 + 187378091 I e nasLar1.chr2 57744460 315 + 181502896 I e ponAbe2.chr3 69672705 305 + 202140232 I e rhiBie1.NW_016820128v1 1249317 315 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I a score=166419.000000 s hg38.chrUn_KI270749v1 128448 17 + 158759 GAAATTTAATATGACTA- s panTro5.chr3 202015635 17 - 202621043 GAAATTTAATATGAGTA- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783660 17 - 205426864 GAAATTTAATATGAGTA- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13630 16 - 17846 GAAATTT-ATATGAGTA- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600324 17 + 86207423 GAAATTTAATATGAGTA- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081630 17 + 204787373 GCAATTTAATATGAGTA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013478 17 - 192460366 GCAATTTAATATGAGTA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125720 17 - 17224310 GCAATTTAATATGAGTA- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437590 17 - 41321030 GCAATTTAATATGAGTA- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509179 17 - 101219884 GTAATTTAATATGAGTA- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895070 17 - 924385 GCAATTTAGTATGAGTA- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736055 17 - 10587913 GCAATTTAATATGAGTA- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071005 17 - 98464013 GAAATTTAACATGAGTA- i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2555865 17 - 2763108 GAAATTTAACATGAGGA- i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280177 17 - 4835464 GAAATTTAACATGAGTG- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746254 17 + 4093027 GAAATTTAACATGAGTA- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11083112 13 + 30473821 ----TTTGACATACTCA- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617388 13 + 58134056 ----TTTATCATAAGCA- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872831 18 - 2187301 GAACTTTAATATGGGCCA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 632940 19 + 2414909 I e micMur3.chr32 1634300 123 - 9149476 I e rhiRox1.KN296641v1 1395321 298 - 1467263 I e papAnu3.chr2 59573311 299 + 187378091 I e nasLar1.chr2 57744460 315 + 181502896 I e ponAbe2.chr3 69672705 305 + 202140232 I e rhiBie1.NW_016820128v1 1249317 315 - 2311269 I e tarSyr2.KE939134v1 192137 979 + 958716 I a score=7346.000000 s hg38.chrUn_KI270749v1 128465 2 + 158759 TA- s panTro5.chr3 202015652 2 - 202621043 TA- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783677 2 - 205426864 TA- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13646 2 - 17846 TA- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600341 2 + 86207423 TA- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081647 2 + 204787373 TA- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013495 2 - 192460366 TA- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125737 2 - 17224310 TA- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437607 2 - 41321030 TA- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509196 2 - 101219884 TA- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895087 2 - 924385 TA- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736072 2 - 10587913 TA- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071022 2 - 98464013 CA- i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2555882 2 - 2763108 CA- i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280194 2 - 4835464 CA- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746271 2 + 4093027 CA- i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 193116 1 + 958716 T-- i tarSyr2.KE939134v1 I 979 I 243 s otoGar3.GL873534 11083125 2 + 30473821 TA- i otoGar3.GL873534 C 0 I 4 s canFam3.chr20 16617401 2 + 58134056 TA- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872849 2 - 2187301 -AA i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e proCoq1.NW_012148064v1 632940 19 + 2414909 I e micMur3.chr32 1634300 123 - 9149476 I e rhiRox1.KN296641v1 1395321 298 - 1467263 I e papAnu3.chr2 59573311 299 + 187378091 I e nasLar1.chr2 57744460 315 + 181502896 I e ponAbe2.chr3 69672705 305 + 202140232 I e rhiBie1.NW_016820128v1 1249317 315 - 2311269 I a score=110535.000000 s hg38.chrUn_KI270749v1 128467 8 + 158759 ------CTTTATTT- s panTro5.chr3 202015654 8 - 202621043 ------ATTTATTT- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783679 8 - 205426864 ------ATTTATTT- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13648 8 - 17846 ------ATTTATTT- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600343 8 + 86207423 ------ATTTATTT- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081649 8 + 204787373 ------ATTTATTT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013497 8 - 192460366 ------ATTTATTT- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125739 8 - 17224310 ------ATTTATTT- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437609 8 - 41321030 ------ATTTATCT- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509198 8 - 101219884 ------ATTTATTT- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895089 8 - 924385 ------ATTTATTT- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736074 8 - 10587913 ------ATTTATTT- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071024 8 - 98464013 ------ATTTATTT- i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2555884 8 - 2763108 ------ATTTATTT- i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280196 8 - 4835464 ------ATTTATTT- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746273 8 + 4093027 ------ATTTATTT- i aotNan1.NW_018502033v1 C 0 C 0 s proCoq1.NW_012148064v1 632959 8 + 2414909 ------ATTTATTT- i proCoq1.NW_012148064v1 I 19 C 0 s otoGar3.GL873534 11083131 8 + 30473821 ------ATGTATTT- i otoGar3.GL873534 I 4 C 0 s canFam3.chr20 16617403 8 + 58134056 ------ATTTATTT- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872851 15 - 2187301 TTTTTTTTTCATTTT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e micMur3.chr32 1634300 123 - 9149476 I e rhiRox1.KN296641v1 1395321 298 - 1467263 I e papAnu3.chr2 59573311 299 + 187378091 I e nasLar1.chr2 57744460 315 + 181502896 I e ponAbe2.chr3 69672705 305 + 202140232 I e rhiBie1.NW_016820128v1 1249317 315 - 2311269 I e tarSyr2.KE939134v1 193117 243 + 958716 I a score=764867.000000 s hg38.chrUn_KI270749v1 128475 49 + 158759 GCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT s panTro5.chr3 202015662 49 - 202621043 GCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783687 49 - 205426864 GCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13656 49 - 17846 GCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600351 49 + 86207423 GCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081657 49 + 204787373 GTTGATTCCAAGATAGGCATCTATATTTTCGCAACATTAAAATAAAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013505 49 - 192460366 GTTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125747 49 - 17224310 GTTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437617 49 - 41321030 GTTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i cerAty1.NW_012009469v1 C 0 I 312 s chlSab2.chr22 64509206 49 - 101219884 GTTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895097 49 - 924385 GTTGATTCCAAGATAGGCATCTGTATTTTCCCAACATTAAAATAAAGAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736082 49 - 10587913 GTTGATTCCAAGATAGGCATCTGTATTTTCCCAACATTAAAATAAAGAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071032 49 - 98464013 GCTGATTCCAAGATAGCCATCTATATTTTCCCAACATTAAAATAAAGAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2555892 49 - 2763108 GCTGATTCCAAGATAGGCATCTATATTTTCTCAACATTAAAATAAAGAT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280204 49 - 4835464 GCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746281 49 + 4093027 GCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1634423 47 - 9149476 GCTGATTCCAAG--AGGCATCTTTATTTTCCCAACATTAAGCTAAAGTT i micMur3.chr32 I 123 C 0 s proCoq1.NW_012148064v1 632967 47 + 2414909 GCTGATTCCAAA--AGGCATCTTTATTTTCCCAACATTAAGCTAAAGTT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11083139 47 + 30473821 GCTGATTCGAAG--AGGTCTCTCTGTTTTCCCCAGGTTAAGATAAAGTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617411 45 + 58134056 GCTGATTTCAAAATAGGCATCTGTATTTTTCCATCATTATGATTC---- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872866 49 - 2187301 GCTGATTCCAAGAAAGGCCTATCTATTTTACCAACATTAACATAAAGGT i dasNov3.JH563077 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1395321 298 - 1467263 I e papAnu3.chr2 59573311 299 + 187378091 I e nasLar1.chr2 57744460 315 + 181502896 I e ponAbe2.chr3 69672705 305 + 202140232 I e rhiBie1.NW_016820128v1 1249317 315 - 2311269 I e tarSyr2.KE939134v1 193117 243 + 958716 I a score=1068263.000000 s hg38.chrUn_KI270749v1 128524 71 + 158759 CATCTGGACAATCTTCTAACCAACTCCGAACAGTTCTTTCTGGAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT s panTro5.chr3 202015711 71 - 202621043 CGTCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCGGGAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783736 71 - 205426864 CGTCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCGGGAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13705 71 - 17846 CATCTGGACAATCTTCTAACCAACTCCGAACAGTTCTTTCTGGAGTTTTTCTCCTTT---------------------TATTTGTCCTACTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600400 71 + 86207423 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTT---------------------TATTTCTTCTACTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081706 71 + 204787373 CATCTGGACAATCTTTTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013554 71 - 192460366 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125796 71 - 17224310 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437978 71 - 41321030 cATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i cerAty1.NW_012009469v1 I 312 C 0 s chlSab2.chr22 64509255 71 - 101219884 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895146 71 - 924385 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736131 71 - 10587913 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071081 71 - 98464013 CATTGGGACAATCTTCTAACCAACTCAAAACAGTTCTTTCTGAAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2555941 71 - 2763108 CATCGGGACAATCTTCTAACTAACTCAAAACGGTTCTTTCTGAAGTTTTTCTCCTTT---------------------TATTTCTCCTATTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280253 71 - 4835464 CATTGGGACAATCTTCGAACCAACTCAAAACAGTTCTTTCTGAAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746330 71 + 4093027 CATCGGGACAATCTTCTAACCAACTCAAAACAGTTCTTTCTGAAGTTTTTCTCCTTT---------------------TATTTCTCCTACTT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1634470 90 - 9149476 CATCTGAACTGTCTTTTAACCAGCTCCAAACAGTGGTTTCTGGAGCATTTCTCCTTTTATTTCCCCTACTTGTAGA--TATTTCTCCTACTT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 633014 90 + 2414909 CATCTGAACAGTCTTTCATCCAGCTCCAAACATTGGTTTCTGGAGTATTTCTCCTTTTATTTCCCTTACTTGGAGA--TATTTCTCCTACTT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11083186 92 + 30473821 CATCTGAGCAGTCTTTCAAACGGCTCCAAACAGTGGTTTTTGGAGTATTTCTCTTTTTATTTGTTTTAGTTGAAGAGGTAATTCTCCAACTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617456 70 + 58134056 CATCCAGATA-TTTTACAACCAGCTCCAAAAGGTGGTTTCTGGAGTTTTTCTCCTTA---------------------TATTTCTCCCACAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872915 70 - 2187301 TATCTAGACAGTCCTCTAACCAGATCCAAACAGTAATATTTGGAGTTTTTCTC-TTT---------------------GATTTCCCCTCTTT i dasNov3.JH563077 C 0 N 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1395321 298 - 1467263 I e papAnu3.chr2 59573311 299 + 187378091 I e nasLar1.chr2 57744460 315 + 181502896 I e ponAbe2.chr3 69672705 305 + 202140232 I e rhiBie1.NW_016820128v1 1249317 315 - 2311269 I e tarSyr2.KE939134v1 193117 243 + 958716 I a score=1478911.000000 s hg38.chrUn_KI270749v1 128595 111 + 158759 GGAGT---TGTAGGAGAAATCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATA-AAAAGACAGAAATTAGCAGCTTGGACATTTCACAAAAGAAGCTAATTAAT s panTro5.chr3 202015782 111 - 202621043 GGAGT---TGTAGGAGAAATCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTGAAATA-AAAGGACAGAAATTAGCAGCTTGGACATTTCACAAAAGAAGCTAATTAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783807 111 - 205426864 GGAGT---TGTAGGAGAAATCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTGAAATA-AAAGGACAGAAATTAGCAGCTTGGACATTTCACAAAAGAAGCTAATTAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13776 111 - 17846 GGAGT---TGTAGGAGAAATCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATA-AAAGGACAGAAATTAGCAGCTTGGACATTTCACAAAAGAAGCTAATTAAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600471 111 + 86207423 GGAGC---TGTAGGAGAAATCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATA-AAAGGACAGAAATTAGCAGCTTGGACATTTCACAAAAAAAGCTAATTAGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081777 110 + 204787373 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAAGAAACAAAAGGTGTTCT-----------------ATTTTAAAATA-AAAGGACAGAAATGAGCAGCTTGGAGAGTTCAGAAAAGAAGCTAATTAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013625 110 - 192460366 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATA-AAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAGCTAATTAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125867 110 - 17224310 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATA-AAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAGCTAATTAGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438049 106 - 41321030 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAAT----AAAAGGTGTTCT-----------------ATTTTAAAATA-AAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAGCTAATTAGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509326 110 - 101219884 GGAGT---TGTAGGTG-TGTCTGTGTCTCACAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATA-AAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAGCTAATTAGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895217 110 - 924385 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATA-AAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAGCTAATTAGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736202 110 - 10587913 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATA-AAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAACTAATTAGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071152 110 - 98464013 GAAGT---TGTAGGTG-CTTCTGTGTCTCATAGAAATAAACAAAAGGTGTTCT-----------------ATTTCAAAATA-AAAGGACAAAAATGAACAGCTTGGAGATTTCACAAAAGAAGCTAATTAGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2556012 109 - 2763108 GGAGT---TGTAGGTG-CTTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTCAAAAT--AAAGGACAAAAATGAACAGCTTGGAGATTTCACAAAAGAAGCTAATTAGT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280324 110 - 4835464 GGAGT---TGTAGGTG-CTTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTCAAAATA-AAAGGATAAAAATGAACAGCTTGGAGATTTCACAAAAGAAGCTAATTAGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746401 110 + 4093027 GGAGT---TGTAGGTG-CTTCTCTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTCAAAATA-AAAGGACAAAAATGAACAGCTTGGAGATTTCACAAAAGAAGCTAATTAGT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1634560 111 - 9149476 GGAGC---TGTAGGTG-TTTTTGTATCTCAGAGAAGTAAACAAAAGGTGTTTT-----------------ATCTCAAAATACAAAGGAAAGAAATGACCAGTGTGGAGATTCCACAAAAAAAGTGAATTATT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 633104 110 + 2414909 GGAAT---TGTAGGTG-TTTCTGTGTCTTAGAGAAGTAAACAAAAGGTGTTTT-----------------ATCTCAAAATA-AAAGGACAGAAATGACCAGTTTGGAGATTCCACAATAAAAGTTAATTACT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11083278 109 + 30473821 AGACT---TGTAGGTG-TTTCTGTGTCTCAGAAAAGTAAACAAAAGGTG-TTT-----------------ATCTCAGGATA-AAAGGACAGAAATGACCAGTTTGGAGATCCCACCAAAAATGTTAATTATT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617526 128 + 58134056 GGTCTTAATGTAGTTG-TTTCTGTGTTT--GACAAATAAACAAAAAGTTTTTTTTTTGTTGTTGTTGTTAATCTCCAAATA-AAAGGAAAGATGTGACCAGCTTGGGGGGGTCCACAAAAAAGCTAATTAGT i canFam3.chr20 C 0 C 0 e eulFla1.LGHW01000501v1 48834 2938 + 635616 I e eulMac1.LGHX01000499v1 48628 2938 + 631505 I e rhiRox1.KN296641v1 1395321 298 - 1467263 I e papAnu3.chr2 59573311 299 + 187378091 I e nasLar1.chr2 57744460 315 + 181502896 I e ponAbe2.chr3 69672705 305 + 202140232 I e rhiBie1.NW_016820128v1 1249317 315 - 2311269 I e tarSyr2.KE939134v1 193117 243 + 958716 I a score=20339.000000 s hg38.chrUn_KI270749v1 128706 1 + 158759 T s panTro5.chr3 202015893 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783918 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13887 1 - 17846 T i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600582 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081887 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013735 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125977 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438155 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509436 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895327 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736312 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071262 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2556121 1 - 2763108 T i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280434 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746511 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 193360 1 + 958716 C i tarSyr2.KE939134v1 I 243 N 0 s micMur3.chr32 1634671 1 - 9149476 T i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 633214 1 + 2414909 T i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 51566 1 + 631505 T i eulMac1.LGHX01000499v1 I 2938 C 0 s eulFla1.LGHW01000501v1 51772 1 + 635616 T i eulFla1.LGHW01000501v1 I 2938 C 0 s otoGar3.GL873534 11083387 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617654 1 + 58134056 T i canFam3.chr20 C 0 C 0 e rhiRox1.KN296641v1 1395321 298 - 1467263 I e papAnu3.chr2 59573311 299 + 187378091 I e nasLar1.chr2 57744460 315 + 181502896 I e ponAbe2.chr3 69672705 305 + 202140232 I e rhiBie1.NW_016820128v1 1249317 315 - 2311269 I a score=9224.000000 s hg38.chrUn_KI270749v1 128707 1 + 158759 -A s panTro5.chr3 202015894 1 - 202621043 -A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783919 1 - 205426864 -A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13888 1 - 17846 -A i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69673010 1 + 202140232 -A i ponAbe2.chr3 I 305 C 0 s nomLeu3.chr21 67600583 1 + 86207423 -A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081888 1 + 204787373 -A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013736 1 - 192460366 -A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125978 1 - 17224310 -A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438156 1 - 41321030 -A i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59573610 1 + 187378091 -A i papAnu3.chr2 I 299 C 0 s chlSab2.chr22 64509437 1 - 101219884 -A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895328 1 - 924385 -A i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57744775 1 + 181502896 -A i nasLar1.chr2 I 315 C 0 s colAng1.NW_012114711v1 6736313 1 - 10587913 -A i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1395619 1 - 1467263 -A i rhiRox1.KN296641v1 I 298 C 0 s rhiBie1.NW_016820128v1 1249632 1 - 2311269 -A i rhiBie1.NW_016820128v1 I 315 C 0 s calJac3.chr15 46071263 1 - 98464013 -A i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2556122 1 - 2763108 -A i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280435 1 - 4835464 -A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746512 1 + 4093027 -A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1634672 1 - 9149476 -A i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 633215 1 + 2414909 -A i proCoq1.NW_012148064v1 C 0 C 0 s eulMac1.LGHX01000499v1 51567 1 + 631505 -G i eulMac1.LGHX01000499v1 C 0 N 0 s eulFla1.LGHW01000501v1 51773 1 + 635616 -G i eulFla1.LGHW01000501v1 C 0 N 0 s otoGar3.GL873534 11083388 1 + 30473821 -G i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617655 1 + 58134056 T- i canFam3.chr20 C 0 C 0 a score=30000.000000 s hg38.chrUn_KI270749v1 128708 1 + 158759 C s panTro5.chr3 202015895 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783920 1 - 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13889 1 - 17846 C i gorGor5.CYUI01007532v1 C 0 C 0 s ponAbe2.chr3 69673011 1 + 202140232 C i ponAbe2.chr3 C 0 N 0 s nomLeu3.chr21 67600584 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081889 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013737 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125979 1 - 17224310 C i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438157 1 - 41321030 C i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59573611 1 + 187378091 C i papAnu3.chr2 C 0 I 377 s chlSab2.chr22 64509438 1 - 101219884 C i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895329 1 - 924385 C i manLeu1.NW_012098965v1 C 0 C 0 s nasLar1.chr2 57744776 1 + 181502896 C i nasLar1.chr2 C 0 N 0 s colAng1.NW_012114711v1 6736314 1 - 10587913 C i colAng1.NW_012114711v1 C 0 C 0 s rhiRox1.KN296641v1 1395620 1 - 1467263 C i rhiRox1.KN296641v1 C 0 N 0 s rhiBie1.NW_016820128v1 1249633 1 - 2311269 C i rhiBie1.NW_016820128v1 C 0 N 0 s calJac3.chr15 46071264 1 - 98464013 C i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2556123 1 - 2763108 C i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280436 1 - 4835464 C i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746513 1 + 4093027 C i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1634673 1 - 9149476 C i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 633216 1 + 2414909 C i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11083389 1 + 30473821 C i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617656 1 + 58134056 C i canFam3.chr20 C 0 C 0 a score=1046654.000000 s hg38.chrUn_KI270749v1 128709 79 + 158759 CAAGCTAACTGGAGGTTTCCTCCATTCATGGGCATACTGGAATTGCAAAATCTAGTTGTGAGCATAGAATAATATCTAT s panTro5.chr3 202015896 79 - 202621043 AAAGCTAACTGGAGGTTTCCTCCATTGATGGGCATGCTGGAATTGCAAAATCTAGTTGTGAGCATAGAATAATATCTAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783921 79 - 205426864 CAAGCTAACTGGAGGTTTCCTCCATTGATGGGCATGCTGGAATTGCAAAATCTAGTTGTGAGCATAGAATAATATCTAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13890 79 - 17846 CAAGCTAACTGGAGGATTCCTCCATTCATGGGCATACTGGAATTGCAAAATCTAGTTGTGAGCATAGAATAATATCTAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600585 79 + 86207423 CAAGCTAACTGGAGGTTTCCTCCATTCATGGGCATACTGGAATTGCAAAATCTAGTTGTGAGCATAGAGTAATATCTAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081890 79 + 204787373 CAAGCTAACTGGAGGTTTCGTCCATTCATGTGCATACTGGAATTGCAAAATCTCGTTATGAGCATAGAATAATATCTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013738 79 - 192460366 CAAGCTAACTGGAGGTTTCGTCCATTCATGTGCATACTGGAATTGCAAAATCTCGTTATGAGCATAGAATAATATCTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125980 79 - 17224310 CAAGCTAACTGGAGGTTTCGTCCATTCATGTGCATACTGGAATTGCAAAATCTCGTTATGAGCATAGAATAATATCTAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438158 79 - 41321030 CAAGCTAACTGGAGGTTTCGTCCATTCATGTGCATCATGGAATTGCAAAATCTCGTTATAAGCATAGAATAATATCTAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509439 79 - 101219884 CAAGCTAAGTGGAGGTTTCGTTCATTCTTGGGCATACTGGAATTGCAAAATCTCGTTATGAGCATAGAATAATATCTAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895330 79 - 924385 CAAGCTAACTGGAGTTTTCGTCCATTCATGTGCATACTGGAATTGCAAAATCTCATTATAAGCATAGAATAATATCTAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736315 79 - 10587913 CAAGCTAACTGGAGGTTTCGTCCATTCATGGGCATACTGAAATTGCAAAATCTCATTATGAACATAGAATAATGTCTAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071265 79 - 98464013 CAAGCTAACTGGAGGTTTCCTGCATTCCTGGGCATACTGGGATTGCAAAATCTAGTTATAGGCATAGAATAATGTCTAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2556124 79 - 2763108 CAAGCTAACTGGAGGTTTCCTGCATTCCTGGGCATATTGGGATTGCAAAATCTAGTTATAGGCATAGAATAATGTCTAT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280437 79 - 4835464 CAAGCTAACTAGAGGTTTCCTGCATTCCTGGGCATATTGGGATTGCAAAATCTAGTTATAGGCATAGAATAATGTCTAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746514 79 + 4093027 CAAGCTAACTGGAGGTTTCCTGCATTCCTGGGCATATTGGGATTGCAAAATCTAGTTATAGGCATAGAATAATGTCTAT i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1634674 79 - 9149476 CAAGCTAACTGGACGTTTGCTGTATTCAGAGGCTTGCTGGGATTGCAAAATCTAGTTATGGGCAAAGAGTAATGAGTAT i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 633217 79 + 2414909 CAAGCTAATTGGAAGTTTGCTATATTCAGACACATGCTAGAATTGCAAAATCTAGTTACGGGCACAGAATAATGTCTAC i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11083390 79 + 30473821 CAAGCTAACTGGAAGTCTGCTGTATTCAGAGGCATGTTGGAATTCCTAAATGTAGGTATGGGCATAGAATAATGTGTAT i otoGar3.GL873534 C 0 I 245 s canFam3.chr20 16617657 79 + 58134056 AGAGCAAAATGGAAGTTTGCTATATTCATGAACACATTCAAATTGTGAAACCGAGTTAGGGGCATAAAATAGTATCTAT i canFam3.chr20 C 0 C 0 e papAnu3.chr2 59573612 377 + 187378091 I a score=4296395.000000 s hg38.chrUn_KI270749v1 128788 296 + 158759 AAAAAGTCTTTAAGATAGCAT-GAAAAAC--ATAGCATAATATCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAACTCCCTTATGCCA-TAATTTGGCTGTATTTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAAC-AAACCAGAGCAGATGGGGCTCTAAG s panTro5.chr3 202015975 296 - 202621043 AAAAAGTCTTTAAGATAGCAT-GAAAAAC--ATAGCATAATATCAGTAACAAAT--ATTTTATAACATCTAAAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTATTTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAAC-AAACCAGAGCAGATGGGGCTCTAAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784000 296 - 205426864 AAAAAGTCTTTAAGATAGCAT-GAAAAAC--ATAGCATAATATCAGTAACAAAT--ATTTTATAACATCTAAAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTATTTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAAC-AAACCAGAGCAGATGGGGCTCTAAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13969 296 - 17846 AAAAAGTCTTTAAGATAGCAT-GAAAAAC--ATAGCATAATATCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAACTCCCTTATGCCATTAATTTGGCTGTATTTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTT-AAAAATGGGCACATTATGCA-TGTGAATGCTATCTCTCTACTAATTAATGTAATGTGGCAGTATCCAAC-AAACCAGAGCAGATGGGGCTCTAAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600664 296 + 86207423 AAAAAGTCTTTAAGATAGCAT-GAAAAAC--ATAGCATAATATCACTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAGCTCCTTTATGCCA-TAATTTGGCTGTATTTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAAACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTTGCTCTCTACTAATTAACGTAATGTGGCAGTATCCAAC-AAACCAGAGCAGATGGGGCTCTAAG i nomLeu3.chr21 C 0 I 2 s rheMac8.chr2 66081969 296 + 204787373 AAAAAGTCTTTAAGACAGCAT-GAAAAAC--ATAGCATAATACCAGTAACAAAT--ATTTTATAATCTCTAAAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTATTTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAAC-AAACTAGAGCAGATGGGGCTCTAAG i rheMac8.chr2 C 0 I 2 s macFas5.chr2 61013817 296 - 192460366 AAAAAGTCTTTAAGACAGCAT-GAAAAAC--ATAGCATAATACCAGTAACAAAT--ATTTTATAATCTCTAAAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTATTTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAAC-AAACTAGAGCAGATGGGGCTCTAAG i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11126059 296 - 17224310 AAAAAGTCTTTAAGACAGCAT-GAAAAAC--ATAGCATAATACCAGTAACAAAT--ATTTTATAATCTCTAAAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTATTTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAAC-AAACTAGAGCAGATGGGGCTCTAAG i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17438237 296 - 41321030 AAAAAGTCTTTAAGACAGCAT-GAAAAAC--ATAGCATAATACCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTATTTA---TGTAATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAAC-AAACTAGAGCAGATGGGGCTCTAAG i cerAty1.NW_012009469v1 C 0 I 2 s chlSab2.chr22 64509518 296 - 101219884 AAAAAGTCTTTAAGACAGCAT-GAAAAAC--ATAGCATAATACCAGTAACAAAT--ATTTTATAATGTCTAAAATTGTATAATTTCTTTTGTCTA-TTTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTATTTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TGTGAACGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAAC-AAACTAGAGCAGATGGGGCTCTAAG i chlSab2.chr22 C 0 I 2 s manLeu1.NW_012098965v1 895409 292 - 924385 AAAAAGTCTTTAAGACAGCAT-GAAAAAC----AGCATAATACCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAGCTCCCTTATGTCA-TAATTTGGCTGTA--TA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TATGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAAC-AAACTAGAGCAGATGGGGCTCTAAG i manLeu1.NW_012098965v1 C 0 I 2 s colAng1.NW_012114711v1 6736394 296 - 10587913 AAAAAGTCTTTAAGACAGTAT-GAAAAAC--ATAGCATAATACCAGTAGCAAAT--GTTTTATAATGTCTAAAATTTTATAACTTCTTTTATCTA-TTTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTATTTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAAGCAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCGCTCTCTACTAATTAATGTAATGTGGCAGTATCCAAC-AAACTAGAGCAGATGGAGCTCTAAG i colAng1.NW_012114711v1 C 0 I 2 s calJac3.chr15 46071344 296 - 98464013 AAAAAGTCTTTAAGATAGCAT-GAAAAAC--GTAGCATAATATCAGTAACAAAT--ATTTTATAATGTCTACAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAGCTCCCTTATGCTA-TAATTTGGCTATATTTA---TGTGATAATCACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGAGCACATTATGCA-TGTGAATGCTCTCTCTTTACTAATTAATGTAATGTGGCAACATCCAAC-TAACTAGAGCAGATGGGGCTCTAAG i calJac3.chr15 C 0 I 2 s saiBol1.JH378290 2556203 291 - 2763108 AAAAAGTCTTTAAGATAGCAT-GAAGAAC--ATAGCATAATATCAGTAACAAAT--ATTTTACAATATCTAAAATTTTATAACTTT-----TCTA-TTTTCTTAAAGCTCCCTTATGCTA-TAATTTGGCTATATTTA---TGTGATAATCACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCCTGTAAAATATGCTTTTGAAAAATGGGCACATTATGTA-TGTGAATGCTCTCTCTTTACTAATTAATGTAATGTGGCAGCATCCAAC-TAACTAGAGCAGATGGGGCTCTAAG i saiBol1.JH378290 C 0 I 2 s cebCap1.NW_016107467v1 280516 296 - 4835464 AAAAAGTCTTTAAGATAGCAT-GAAAAAC--ATAGCATAATATCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATGACTTCTTTTGTCTA-TTTTCTTAAAGCTCCCTTATGCTA-TAATTTGGCTATATTTA---TGTGATAATCACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTTTACTAATTAATGTAATGTGGCAGCATCCAAC-TAACTAGAGCAGATGGGGCTCTAAG i cebCap1.NW_016107467v1 C 0 I 2 s aotNan1.NW_018502033v1 3746593 296 + 4093027 AAAAAGTCTTTAAGATAGCAT-GAAAAAC--ATAGCATAGTATCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-TTTTCTTAAAGCTCCCTCATGCTA-TAATTTGGCTATATTTG---TGTGATAATCACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTTTACTAATTAGTGTAATGTGGCAGCATCCAAC-TAACTAGAGCAGATGGGGCTCTAAG i aotNan1.NW_018502033v1 C 0 I 2 s micMur3.chr32 1634753 305 - 9149476 AAAAGGTCTTT-ATATAGTATAAAAAAACTTTTATCATATTATTAGTAGCAAATAGATTTTATAATGTCTAAAATGTTATAATTACTTTTGTCTATTTTTCTTAAAGTTTCCTTATGCCA-TAATTTGGCTATATTTGCTTTATGATAATCACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGGCAGAATCATGTAAATTATGCCTTTGGAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTTTACTAATGAGTGTAACGTGGCAGTATCCAACTAAACTAGAGCAGATGGGGTTCTACG i micMur3.chr32 C 0 C 0 s proCoq1.NW_012148064v1 633296 302 + 2414909 AAAAAGTCTTT-AGATAGTAT-AAAAAACTTTTATCATATTATTAGTAGCAAATAGATTTTATAATGTCTAAAATGTTATAATTACTTTTGTCTATTTTTCTTAAAGTTTCCTTATGCCA-TAATTTGGCTATATTTGCTTTATGATAATCACACTCTTGTCTTTGCAATGAATTTTTAAGGAAAAGGCAGAATCATGTAAATTATG-CTTTGGAAAATGGGCACATTATGCA-TG-GAATGCTCTCTCCTTACTAATGAGTGTAATGTGGCAGTATCCAACTAAACTAGAGCAGATGGGGCTCTTTG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11083714 304 + 30473821 aaaaaGTCCTTAAGATAGTGT-AAAAAACTTTTATCATATTACTTGCAGCAGATAGATTTCATAATGTTTAAAATGTTATAACTACTTTCGTCTGTTTTTCTTCAAGTCTCCTTACACCG-TAATTTGGCTATATTTGTTTTATGATAATCGCACTCTTACCCTGATAATGAATTTCTAAAGGGAGGACGGAATCATGTAAATTATGCCTTTGGAAACTGGGCGCATTATGCA-CGGGAATGCTCCCTCTTCGCTGATGGATGGAACGTGGCAGCA-CCAACTAAACCAGAGCAGATGGGGCTCCACG i otoGar3.GL873534 I 245 C 0 s canFam3.chr20 16617736 294 + 58134056 AAAAAGTCTTTAAGATAGCAC-AAAACTT-TTTACAATGCTAACAGTAAGAAATAGATTTTATAATGCCTAAAATCTTATAACTACTTCTGTCTACATTTTTTAAACTTCCTTTATGCCA-TAATTTGGCTTTATTTGTTATATGATAATCAAACTCTTATCTTTGTAATGAATTTTTAATGAAAAGACA------TGCAAAATATGCCCATGGAAAGTGGGCACATTATATGTTGTGGATGCTGTCTCTTGATGAATTAGCATGCTGTGGCAGTATGCAAC-TCCTC----TAGATGGGGCTCTGAG i canFam3.chr20 C 0 I 2 e papAnu3.chr2 59573612 377 + 187378091 I a score=19110.000000 s hg38.chrUn_KI270749v1 129084 1 + 158759 T s panTro5.chr3 202016271 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784296 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14265 1 - 17846 T i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600962 1 + 86207423 T i nomLeu3.chr21 I 2 C 0 s rheMac8.chr2 66082267 1 + 204787373 T i rheMac8.chr2 I 2 C 0 s macFas5.chr2 61014115 1 - 192460366 T i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11126357 1 - 17224310 T i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17438535 1 - 41321030 T i cerAty1.NW_012009469v1 I 2 C 0 s papAnu3.chr2 59573989 1 + 187378091 T i papAnu3.chr2 I 377 I 658 s chlSab2.chr22 64509816 1 - 101219884 T i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 895703 1 - 924385 T i manLeu1.NW_012098965v1 I 2 C 0 s colAng1.NW_012114711v1 6736692 1 - 10587913 T i colAng1.NW_012114711v1 I 2 C 0 s calJac3.chr15 46071642 1 - 98464013 T i calJac3.chr15 I 2 C 0 s saiBol1.JH378290 2556496 1 - 2763108 T i saiBol1.JH378290 I 2 C 0 s cebCap1.NW_016107467v1 280814 1 - 4835464 T i cebCap1.NW_016107467v1 I 2 C 0 s aotNan1.NW_018502033v1 3746891 1 + 4093027 T i aotNan1.NW_018502033v1 I 2 C 0 s micMur3.chr32 1635058 1 - 9149476 T i micMur3.chr32 C 0 I 2 s proCoq1.NW_012148064v1 633598 1 + 2414909 T i proCoq1.NW_012148064v1 C 0 I 2 s otoGar3.GL873534 11084018 1 + 30473821 T i otoGar3.GL873534 C 0 I 2 s canFam3.chr20 16618032 1 + 58134056 T i canFam3.chr20 I 2 C 0 a score=1897752.000000 s hg38.chrUn_KI270749v1 129085 132 + 158759 TGTACCAGCCTGTGCCGTTCTTAGGGGGAACAA--TTTTTGTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGGGAAGGATAGTATAATTTAACAAACAGCAGAGAGTGTGACCATTCAGACTGCTTTTTCCT s panTro5.chr3 202016272 132 - 202621043 TGTACCAGCCTGTGCCGTTCTTAGGGGGAACAA--TTTTTGTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGGGAAGGATAGTATAATTTAACAAACAACAGAGAGTGTGACCATTCAGACTGCTTTTTCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784297 132 - 205426864 TGTACCAGCCTGTGCCGTTCTTAGGGGGAACAA--TTTTTGTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGGGAAGGATAGTATAATTTAACAAACAACAGAGAGTGTGACCATTCAGACTGCTTTTTCCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14266 132 - 17846 TGTACCAGCCTGTGCCATTCTTAGGGGGAACAA--TTTTTGTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGAGAAGGATAGTATAATTTAACAAACAACAGAGAGTGTGACCATTCAGACTGCTTTTTCCT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600963 132 + 86207423 TGTACCAGCCTGTGCCATTCTTAAGGGGAACAA--TTTTTGTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGGGAAGGATGGTATAATTTAACAAACAACAGACAGTGTGACCATTCAGACTGCTTTTTCCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082268 132 + 204787373 TGTACCAGCCTATGCCGTTCTTAAGGGGAACAA--TTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014116 132 - 192460366 TGTACCAGCCTATGCCGTTCTTAAGGGGAACAA--TTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126358 132 - 17224310 TGTACCAGCCTATGCCGTTCTTAAGGGGAACAA--TTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438536 132 - 41321030 TGTACCAGCCTATGCCGTTCTTAAGGGGAACAA--TTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509817 132 - 101219884 TGTACCAGCCTATGCCATTCTTAAGGGGAACAA--TTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895704 132 - 924385 TGTACCAGCCTATGCTGTTCTTAAGGGGAACAA--TTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736693 132 - 10587913 TGTACCAGCCTATGCCATTCTTAAGGGGAACAA--TTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071643 132 - 98464013 TATACCAGCCTATGCCATTCTTAAGGAAAAAAA--TTTTTGTTCACAT--CTCTGAATAAAGAGAGTGAGATTTTGGGAAGGATGACATAATTTAACAAGCAATAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2556497 132 - 2763108 TATACCAGCCTATGCCATTCTTAAGGAAAAAAA--TTTTTGTTCACAT--ATCTGAATAAAGAGAGTGAGATTTCGGGAAGGATGACATAATTTAACAAACAACAGAAAGTGTGACCATTCAGATTGCCTTTTCCT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280815 132 - 4835464 TATACCAGCCTATGTCATTCTTAAGGAAAAAAA--TTTTTGTTCACAT--CTCTGAATAAAGAGAGTGAGATTTCGGGGAGGATGACATAATTTAACGAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i cebCap1.NW_016107467v1 C 0 N 0 s aotNan1.NW_018502033v1 3746892 131 + 4093027 TATACCAGCCTATGCCATTCTTAAGGAAAAAAA--TTTTTGTTCACAT--CTCTGAATAAAGAGAGTGAGATTTCGGGAAGGATGACATAATTTAACAAACAACAGAGCGTGTGACCATTCAGATTGCCTTTCCT- i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1635061 136 - 9149476 TGCACCAGCCTATGCCATTCTTAAGGGGAATACTTTTTTTTTTCACATAACTTTAAGTAAAAAGAGTGGGATTTGTGGAAAGATGGCATAATTGCACAAACAACGGAGAGCGTGACCATTCCGATGGCCTTTTCCT i micMur3.chr32 I 2 C 0 s proCoq1.NW_012148064v1 633601 134 + 2414909 AGTACCAGTCTATGCCATTCTTAAGGGGAACAA--TTTTTGTTCACATAACTTTAAGCAAAAAGAGTGGGATTTGGGGAAAGATGGCATAATTTAACAAACAGCAGAGAGTGTGACCGTTCAGATGGCCTTTTCCT i proCoq1.NW_012148064v1 I 2 C 0 s otoGar3.GL873534 11084021 133 + 30473821 -GCGCCAGTTCATGCCACGCTTAAGGAGAACCG--TTTTTGCTCAAATAACTTCAAGTAAAAAGAGTAAGATTTGGGGAAAGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATCCAGATGGCCTTTTCCT i otoGar3.GL873534 I 2 C 0 s canFam3.chr20 16618033 124 + 58134056 TGAACCAGCCTATTCTATTCTTAAGGGGAGTCA--TTTGTGTTTCCTT--ACTTAAATAAAGTGAGTG-GATTCAGGTAATAATGGCATAATTTAAC-------AGAGAGTGTAACCATTCTGAGGGCCTTTTCCT i canFam3.chr20 C 0 C 0 e papAnu3.chr2 59573990 658 + 187378091 I a score=5502.000000 s hg38.chrUn_KI270749v1 129217 1 + 158759 G s panTro5.chr3 202016404 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784429 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14398 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601095 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082400 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014248 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126490 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438668 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509949 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895836 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736825 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071775 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2556629 1 - 2763108 A i saiBol1.JH378290 C 0 C 0 s aotNan1.NW_018502033v1 3747023 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s micMur3.chr32 1635197 1 - 9149476 G i micMur3.chr32 C 0 I 309 s proCoq1.NW_012148064v1 633735 1 + 2414909 G i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11084154 1 + 30473821 G i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618157 1 + 58134056 A i canFam3.chr20 C 0 C 0 e papAnu3.chr2 59573990 658 + 187378091 I a score=479763.000000 s hg38.chrUn_KI270749v1 129218 49 + 158759 TCAACCACTTG-AATGCAAAAC----CTGTTTCAGAGATGA-AGCA----ATAGAAAGT s panTro5.chr3 202016405 49 - 202621043 TCAACCACTTG-AATGCAAAAC----CTGTTTCAGAGAtga-agca----atagaaagt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784430 49 - 205426864 TCAACCACTTG-AATGCAAAAC----CTGTTTCAGAGAtga-agca----atagaaagt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14399 49 - 17846 TCAACCACTTG-AATGCAAAAC----CTGTTTCAGAGAtga-agca----atagaaagt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601096 50 + 86207423 TCAACCACTTGCAATGCAAAAC----CTTTTTCAGAGATGA-AGCA----ATAGAAAGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082401 50 + 204787373 TCAACCACTTGCAAGGCAGAAC----CTGTTTCAGAGATGA-AGCA----ATAGAAAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014249 50 - 192460366 TCAACCACTTGCAAGGCAGAAC----CTGTTTCAGAGATGA-AGCA----ATAGAAAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126491 50 - 17224310 TCAACCACTTGCAAGGCAGAAC----CTGTTTCAGAGAtga-agca----atagaaagt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438669 50 - 41321030 TCAACCACTTGCAAGGCAGAAC----CTGTTTCAAAGAtga-agca----atagaaagt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509950 50 - 101219884 TCAACCACTTGCAAGGCAGAAC----CTGTTTCAGAGATGA-AGCA----ATAGAAAGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895837 50 - 924385 TCAACCACTTGCAAGGCAGAAC----CTGTTTCAAAGAtga-agca----atagaaagt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736826 50 - 10587913 TCAACCGCTTGCAAGGCAAAAC----TTGTTTCAGAGAtga-agca----atagaaagt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071776 50 - 98464013 TGCACCATTTGCAATGCAAAAC----CTGCTTCAGGGATGA-AGGA----ATAGAGAGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2556630 50 - 2763108 TCCACCATTTGCATTGCAAAAC----CTGCTTCATAGATGA-AGCT----ATAGAGAGT i saiBol1.JH378290 C 0 C 0 s aotNan1.NW_018502033v1 3747024 50 + 4093027 ACCACCATTTGCATTGCAAAAC----CTGCTTCAGGGATGA-AGCA----ATAGAGAGT i aotNan1.NW_018502033v1 C 0 N 0 s proCoq1.NW_012148064v1 633736 58 + 2414909 TCTACCATTTGCAATGCAAAACCTTACTGTTTTAGGAATGA-GGCAATATATGGAGAGT i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11084155 58 + 30473821 TCAACTATTGGCAATGCAAAACCTTACTGTTTCAGGAATGA-GGCAATCGATACAGAGT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618158 53 + 58134056 TTGACTATTTGCAACACAAAGCCTCACTGTTTGAGGAGTGACCGTA----ATAGAGT-- i canFam3.chr20 C 0 C 0 e micMur3.chr32 1635198 309 - 9149476 I e papAnu3.chr2 59573990 658 + 187378091 I a score=22037.000000 s hg38.chrUn_KI270749v1 129267 2 + 158759 GT s panTro5.chr3 202016454 2 - 202621043 gt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784479 2 - 205426864 gt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14448 2 - 17846 gt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601146 2 + 86207423 GT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082451 2 + 204787373 GT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014299 2 - 192460366 GT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126541 2 - 17224310 gt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438719 2 - 41321030 gt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510000 2 - 101219884 GT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895887 2 - 924385 gt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736876 2 - 10587913 gt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071826 2 - 98464013 AT i calJac3.chr15 C 0 N 0 s saiBol1.JH378290 2556680 2 - 2763108 AT i saiBol1.JH378290 C 0 N 0 s proCoq1.NW_012148064v1 633794 2 + 2414909 Gt i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11084213 2 + 30473821 GT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618211 2 + 58134056 Gt i canFam3.chr20 C 0 C 0 e micMur3.chr32 1635198 309 - 9149476 I e papAnu3.chr2 59573990 658 + 187378091 I a score=707889.000000 s hg38.chrUn_KI270749v1 129269 92 + 158759 TGGAAG-CAAGACAGATACGAGTTGGAATCCCAACCATTGCCATGGGTGACCACTAAAcctcagcttcctcatcggcagtatggggataacca s panTro5.chr3 202016456 92 - 202621043 tggaag-caagacagatatgagttggaatcccaaccattgccatgggtgaccactaaacctcagcttcctcatcggcagtatggggataacca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784481 92 - 205426864 tggaag-caagacagatatgagttggaatcccaaccattgccatgggtgaccactaaacctcagcttcctcatcggcagtatggggataacca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14450 92 - 17846 tggaag-caagacagatatgagttggaatcccaaccattgccatgggtgaccactaaacctcagcttcctcatcggcagtatggggataacca i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601148 92 + 86207423 TGGAAG-CAAGACAGGTATGAGCTGGAATCCCAACCATTGCCATGGGTGACCACTAAAcctcagcttcctcatcagcagtatggggataacca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082453 92 + 204787373 TGGAAG-CAAGACAGATATGAGTTGGAATCCCAACCATTGCCACGGGCGACCActaaacctcagcttcctcattggcagtatggggataacca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014301 92 - 192460366 TGGAAG-CAAGACAGATATGAGTTGGAATCCCAACCATTGCCACGGGCGACCActaaacctcagcttcctcattggcagtatggggataacca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126543 92 - 17224310 tggaag-caagacagatatgagttggaatcccaaccattgccacgggcgaccactaaacctcagcttcctcattggcagtatggggataacca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438721 91 - 41321030 tggaag-c-agacagatatgagttggaatcccaaccattgccacgggcgaccactaaacctcagcttcctcatcggcagtatggggataacca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510002 93 - 101219884 TGGAAGCCAAGACAGATATGAGTTGGAATCCCAACCATTGCCACGGGCGACCActaaacctcagcttcctcatcggcagtatggggataacca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895889 92 - 924385 tggaag-caagacagatatgagttggaatcccaaccattgccacgggccatcactaaacctcagcttcctcatcggcagtatggggataacca i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736878 92 - 10587913 tggaag-caagatagatatgagttggaatcccgaccattgccacgggcgaccactaaacctcagcttcctcatcagcagtatggggataacca i colAng1.NW_012114711v1 C 0 C 0 s proCoq1.NW_012148064v1 633796 89 + 2414909 ttgaaa-taagacagatgag--ttggaatcccaa-cattgtcatgggtgactactaaccctcagttttctcatctggagcatgggcataagca i proCoq1.NW_012148064v1 C 0 I 147 s otoGar3.GL873534 11084215 91 + 30473821 TTGAAG-AAACACAGATAAGATTCGGAATTCCCA-CATTGCCAGGGGTGACCGCTAACcctcggtttcctcatcaggagagtggggatgacca i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618213 90 + 58134056 -tgaag-taagacaagcgcagggtggagtcttga-ttctaccttgggaagccactaaacctcagtttcctcatctgtaaaatgtgaataatga i canFam3.chr20 C 0 C 0 e micMur3.chr32 1635198 309 - 9149476 I e papAnu3.chr2 59573990 658 + 187378091 I a score=869251.000000 s hg38.chrUn_KI270749v1 129361 138 + 158759 tagtagcaaacatttctaaaggtaattgtgagaagtaCTTTTATGACTGCACAATTAATGCTGCTTCTAGTACCACTACAACTGCTGCTATT-----CTATTACTATCAGTGCCTCTA-------------TTACTATCAG-----AGCCACAGAGCTCTA s panTro5.chr3 202016548 138 - 202621043 tagtagcaaacatttctaaaggtaattgtgagaagtaCTTTTATGAGTGCACAATTAATGctgcttctactaccattacaactgctgctatt-----ctattactatcagtgcctcta-------------ttactaTCAG-----AGCCACAGAGCTCTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784573 138 - 205426864 tagtagcaaacatttctaaaggtaattgtgagaagtaCTTTTATGAGTGCACAATTAATGctgcttctactaccattacaactgctgctatt-----ctattactatcagtgcctcta-------------ttactaTCAG-----AGCCACAGAGCTCTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14542 137 - 17846 tagtagcaaacatttctaaaggtaattgtgagaagta-TTTTATGACTGCACAATTAATGctgcttctactaccactacaactgctgctatt-----ctattactatcagtgcctcta-------------ttactaTCAG-----AGCCACAGAGCTCTA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601240 138 + 86207423 tagtagcaaacatttctaaaggtaattgtgagaagtaCTTTTAAGAGTGCACAATTAATGTTGCTTCTACTACCATTACAACTGCTGCTATT-----CTATTACCATTAGTGCCTCTA-------------TTACTATCAG-----AGCCACAGAACTCTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082545 138 + 204787373 tggtagcaaatatttctaaaggtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGCTGCGTctactaccattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014393 138 - 192460366 tggtagcaaatatttctaaaggtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGCTGCGTctactaccattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126635 138 - 17224310 tggtagcaaatatttctaaaggtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGCTGCGTctactaccattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438812 138 - 41321030 tggtagcaaatatttctaaaggtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGCTGCATctactactattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510095 138 - 101219884 tggtagcaaatatttctaaaggtacttgtgagaaGTGCTTTTATGAGTGCAAAATTAATGCTGCGTctactaccattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895981 138 - 924385 tggtagcaaatatttctaaaggtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGCCGCGTctactaccattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736970 138 - 10587913 tggtagcaaatatttctaaaagtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGctgcttctactaccattaaaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACACAGCTCTA i colAng1.NW_012114711v1 C 0 C 0 s otoGar3.GL873534 11084306 145 + 30473821 cagtaacagtcatttcctagtgttcttgtgagaaGTG---ATACAGGTTCTCAGTAAGTGCTCATTCTCCTGCCATAACAACGCCTGCTACGTC-CACTATGACTGTCAGTGCCTCTGT------------TTCCTACCTGTTGCCGGGCACAGGGCTGCA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618303 151 + 58134056 tagtagcaatggtgtgaaagggttcttttgaggagta---atatgagtgcacaataaatgCTGCTTCTATAGTTATTACTACTGCTGCTGCTACTCCTTCCTCCTGTTAGCACCTCTATTTCTTATTCCCATTATTCCCAG-----GTTCACA--GTTCTA i canFam3.chr20 C 0 C 0 e proCoq1.NW_012148064v1 633885 147 + 2414909 I e micMur3.chr32 1635198 309 - 9149476 I e papAnu3.chr2 59573990 658 + 187378091 I a score=76663.000000 s hg38.chrUn_KI270749v1 129499 11 + 158759 GCTTATAAGCC s panTro5.chr3 202016686 11 - 202621043 GCTTACAAGCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784711 11 - 205426864 GCTTACAAGCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14679 11 - 17846 GCTTATAAGCC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601378 11 + 86207423 GCTTATAAGCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082683 11 + 204787373 GCTTATAAACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014531 11 - 192460366 GCTTATAAACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126773 11 - 17224310 GCTTATAAACC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438950 11 - 41321030 GCTTATAAACC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510233 11 - 101219884 GCTTATAAACC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 896119 11 - 924385 GCTTATAAACC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6737108 11 - 10587913 GCTTATAAACC i colAng1.NW_012114711v1 C 0 C 0 s proCoq1.NW_012148064v1 634032 11 + 2414909 GTTCATAACCT i proCoq1.NW_012148064v1 I 147 C 0 s otoGar3.GL873534 11084451 11 + 30473821 GTCCATAACCT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618454 11 + 58134056 GTTAATAATCT i canFam3.chr20 C 0 C 0 e micMur3.chr32 1635198 309 - 9149476 I e papAnu3.chr2 59573990 658 + 187378091 I a score=1211722.000000 s hg38.chrUn_KI270749v1 129510 134 + 158759 CATCTATTCATTTCTAGACTGACATGATCATTTTTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGCAAATCACTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTAGGTAAGTG s panTro5.chr3 202016697 134 - 202621043 CATCTATTCATTTCTAGACTGACATGATCATTTTTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGCAAATCACTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTAGGCAAGTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784722 134 - 205426864 CATCTATTCATTTCTAGACTGACATGATCATTTTTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGCAAATCACTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTAGGCAAGTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14690 134 - 17846 CATCTATTCATTTATAGACTGACATGATCATTTTTGCACATTCTCATTGCCTCCCATTTCTACCTTCTATAACTTATCCTGCAAATCACTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTACGTAAGTG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601389 134 + 86207423 CATCTATTCATTTCTAGACTGACATGATCATTTTTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTATCTTATCCTGCAAATCACTACC----TAATTATATGTCAATATTCTGTTTTGAACGCTATGCAAGTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082694 134 + 204787373 CATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTATGCAAGTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014542 134 - 192460366 CATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTATGCAAGTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126784 134 - 17224310 CATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTATGCAAGTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438961 134 - 41321030 CATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACGCTATGCAAGTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510244 134 - 101219884 CATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTATGCAAGTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 896130 134 - 924385 CATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACGCTATGCAAGTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6737119 134 - 10587913 CATCTATTCATTTCTAGACTGACATGCTCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTATGCAAGTG i colAng1.NW_012114711v1 C 0 C 0 s micMur3.chr32 1635507 134 - 9149476 CATCTATTCAGATCTAGACTAACACGATCATTCCTGCATATCCTCATTGCCTGCCATCTCTGTTCTCTCTAATTTATCCTGCAAACCACTACC----TAATTATACGTTAATAGTCTGTTTTAAACTCTAAGCAAGTG i micMur3.chr32 I 309 N 0 s proCoq1.NW_012148064v1 634043 134 + 2414909 CATCTATTCAGTTCTAGGCTGACATGATCACTTCTGCATACCCTCATTGCCTCCTATTTCTATTGTCTCTAATTTATTCTGCAAACCACTACC----TAAATATATGTTAATAGTCTGTTTTGAACTCTAAGCAAGTG i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11084462 128 + 30473821 CGTCTG-CCACATCTAGACTGATGCCGTCATTCCTGCATGGCCTCATTGCCTCCTGTTTCTA-----TCAGATTTTTCCTACAAACCACTACC----GAATTATAGGTTAATATTCTGTTTGGAACTTCAAGCAAGTA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618465 136 + 58134056 CCTCGATTCATGACTACATTAACATGGTCATCCCTGCATA--CTCATTGTCTCCCATCTCTACTTCCTTTAATGTATCCTGAAAATCACTGCCTGATTGATTACATGTAAAGATTGTATTTTGAACTCTAAGCAACTT i canFam3.chr20 C 0 C 0 e papAnu3.chr2 59573990 658 + 187378091 I a score=143109.000000 s hg38.chrUn_KI270749v1 129644 19 + 158759 ---CTTTCTCTATTTCAATTTT s panTro5.chr3 202016831 19 - 202621043 ---CTTTCTCTATTTCAATTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784856 19 - 205426864 ---CTTTCTCTATTTCAATTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14824 19 - 17846 ---CTTTCTCTATTTCAATTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601523 19 + 86207423 ---CTTTCTGTATTTCAATTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082828 19 + 204787373 ---CTTTCTCTACTTCAATTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014676 19 - 192460366 ---CTTTCTCTACTTCAATTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126918 19 - 17224310 ---CTTTCTCTACTTCAATTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17439095 19 - 41321030 ---CTTTCTCTACTTCAATTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510378 19 - 101219884 ---CTTTCTCTACTTCAATTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 896264 19 - 924385 ---CTTTCTCTACTTCAATTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6737253 19 - 10587913 ---CTTTCTCTACTTCAATTTT i colAng1.NW_012114711v1 C 0 C 0 s proCoq1.NW_012148064v1 634177 19 + 2414909 ---CTTTTTCTATTTTAAGTTA i proCoq1.NW_012148064v1 C 0 C 0 s otoGar3.GL873534 11084590 19 + 30473821 ---CTTTTCCTATTTTAACTTA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618601 22 + 58134056 ATTTCTCtttttttttaatttt i canFam3.chr20 C 0 I 236 e papAnu3.chr2 59573990 658 + 187378091 I a score=313843.000000 s hg38.chrUn_KI270749v1 129663 47 + 158759 AAAAAAGAAATTCTTGCTCCAAGTCAGTGATTCTCCACCAGGGATAA s panTro5.chr3 202016850 47 - 202621043 TAAAAAGAAATTCTTGCTCCAAGTCAGTGATTCTCCACCAGGGATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784875 47 - 205426864 AAAAAAGAAATTCTTGCTCCAAGTcagtgattctccaccagggataa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14843 47 - 17846 AAAAAAGAAATTCTTGCTCCAAGTCAGTGATTCTCCACCAGGGATAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601542 47 + 86207423 AGAAAAGAAATTCTTGCCCCAAACcagtgattctccaccagggataa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082847 47 + 204787373 AAAAAATAAATTCTTGCTCCAAGTCATTGATTCTCAACCAGAGATAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014695 47 - 192460366 AAAAAATAAATTCTTGCTCCAAGTCATTGATTCTCAACCAGAGATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126937 47 - 17224310 AAAAAATAAATTCTTGCTCCAAGTCATTGATTCTCAACCAGAGATAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17439114 47 - 41321030 AAAAAATAAATTCTTGCTCCAAGTcagtgattctcaaccagagataa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510397 47 - 101219884 AAAAAATAAATTCTTGCTCCAAGTCAGTGATTCTCAACCAGAGATAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 896283 47 - 924385 AAAAAATAAATTCTTGCTCCAAGTcagtgattctcaaccagagataa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6737272 47 - 10587913 AAAAAAGAAATTCTTGCTCCAAGTcagtgattctcaactagagataa i colAng1.NW_012114711v1 C 0 C 0 s proCoq1.NW_012148064v1 634196 47 + 2414909 TAAATAGAAATCCATGCTCCAAGTcagtggttctcaaacagggataa i proCoq1.NW_012148064v1 C 0 N 0 s otoGar3.GL873534 11084609 47 + 30473821 TAAACAGAAATCTATGTTGCAAGTCTGTGGTGCTCAAGTAGGAGTTA i otoGar3.GL873534 C 0 C 0 e papAnu3.chr2 59573990 658 + 187378091 I e canFam3.chr20 16618623 236 + 58134056 I a score=201345.000000 s hg38.chrUn_KI270749v1 129710 32 + 158759 CTGTAATGTACAGAGAACCTTTAGTAATGTCT s panTro5.chr3 202016897 32 - 202621043 TTGTAATGTACAGAGGACCTTTAGTAAAGTCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784922 32 - 205426864 ttgtaatgtacagaggacctttagtaatgtct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14890 32 - 17846 TTGTAAAGTACAGAGAACCTTTAGTAATGTCT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601589 32 + 86207423 ttgtaatgtacagaagacctttagtaatgtct i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082894 32 + 204787373 CTGTAATGTACAGAGGACCTTTAGTAATGTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014742 32 - 192460366 CTGTAATGTACAGAGGACCTTTAGTAATGTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126984 32 - 17224310 CTGTAATGTACAGAGGACCTTTAGTAATGTCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17439161 32 - 41321030 ttgtaatgtacagaggacctttagtaatgtct i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510444 32 - 101219884 CTGTAATGTACAGAGGACCTTTAGTAATGTCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 896330 32 - 924385 ctgtaatgtacagaggacctttagtaatgtct i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6737319 32 - 10587913 ttgtaatgtacagaggacctttagtaatgtct i colAng1.NW_012114711v1 C 0 C 0 s otoGar3.GL873534 11084656 32 + 30473821 TTTTAACTAGCAGGGGACTGTTAGcagtgtct i otoGar3.GL873534 C 0 C 0 e papAnu3.chr2 59573990 658 + 187378091 I e canFam3.chr20 16618623 236 + 58134056 I a score=1820.000000 s hg38.chrUn_KI270749v1 129742 1 + 158759 -G s panTro5.chr3 202016929 1 - 202621043 -G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784954 1 - 205426864 -g i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14922 1 - 17846 -G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601621 1 + 86207423 -g i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082926 1 + 204787373 -G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014774 1 - 192460366 -G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11127016 1 - 17224310 -G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17439193 1 - 41321030 -g i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59574648 1 + 187378091 -g i papAnu3.chr2 I 658 N 0 s chlSab2.chr22 64510476 1 - 101219884 -G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 896362 1 - 924385 -g i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6737351 1 - 10587913 -g i colAng1.NW_012114711v1 C 0 C 0 s otoGar3.GL873534 11084688 1 + 30473821 t- i otoGar3.GL873534 C 0 C 0 e canFam3.chr20 16618623 236 + 58134056 I a score=50400.000000 s hg38.chrUn_KI270749v1 129743 8 + 158759 -AAAAAAGC s panTro5.chr3 202016930 8 - 202621043 -AAAAAAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784955 8 - 205426864 -aaaaAAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14923 8 - 17846 -AAAAAAGC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601622 8 + 86207423 -aaaaAAGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082927 8 + 204787373 -AAAAAAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014775 8 - 192460366 -AAAAAAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11127017 8 - 17224310 -AAAAAAGC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17439194 8 - 41321030 -aaaaAAGC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510477 8 - 101219884 -AAAAAAGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 896363 8 - 924385 -aaaaAAGC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6737352 8 - 10587913 -aaaaAAGC i colAng1.NW_012114711v1 C 0 C 0 s otoGar3.GL873534 11084689 9 + 30473821 taaggggac i otoGar3.GL873534 C 0 C 0 e canFam3.chr20 16618623 236 + 58134056 I a score=931429.000000 s hg38.chrUn_KI270749v1 129751 136 + 158759 a-tcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagaggtaca---ggtactattggcatctagagatagaggccagggaagcttctaaacatcctataattc---aGACTCCTCTTG s panTro5.chr3 202016938 136 - 202621043 a-tcttgacccacagaggacatttagcaacatctagacg-cactttcggctgtcacaactagaggtgca---ggtactattggcatctagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784963 136 - 205426864 A-ACttgacccacagaggacatttagcaacatctagacg-cactttcggctgtcacaactagaggtgca---ggtactattggcatctagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14931 136 - 17846 a-tcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagaggtaca---ggtactattggcatctagagatagaggccagggaagcttctaaacatcctataattc---aGACTCCTCTTG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601630 136 + 86207423 a-tcttgacccacagaggacattcagcaacatctagatg-cacttttggctgtcacaactagaggtaca---ggtactattggcatctagagatagaggccagggaagcttctaaacatcctacaattc---agactcctcttg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082935 136 + 204787373 a-tcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagagggaaa---ggtactattggcgcttagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i rheMac8.chr2 C 0 N 0 s macFas5.chr2 61014783 136 - 192460366 a-tcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagagggaaa---ggtactactggcacttagagacagaggccagggaagcttctaaacatcctataattc---agactcctcttg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11127025 136 - 17224310 a-tcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagagggaaa---ggtactattggcgcttagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i macNem1.NW_012018021v1 C 0 N 0 s cerAty1.NW_012009469v1 17439202 136 - 41321030 a-tcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagagggaaa---ggtactattggcgcttagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i cerAty1.NW_012009469v1 C 0 N 0 s chlSab2.chr22 64510485 136 - 101219884 a-tcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaagtagagggaaa---ggtactattggcgcttagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 896371 136 - 924385 a-tcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagagggaaa---ggtactattggcgcttagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i manLeu1.NW_012098965v1 C 0 N 0 s colAng1.NW_012114711v1 6737360 136 - 10587913 a-tcttgacccacagaggacatttagcaacatctagatg-aacttttagctgtcacaactagaggtaaa---ggtactattggtgcctagagatagaggccagggaagcttctaaacatcctataaatc---agactcctcttg i colAng1.NW_012114711v1 C 0 N 0 s otoGar3.GL873534 11084698 134 + 30473821 agttttaacccaaagggga-agttagcactgtctggagg-catttttggttttcac-actag-gctgca---gatactattggcatctagtgacagaggccagagaagctgctaagtatcctgtaaacc---agaaggttccca i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618859 140 + 58134056 a-ttttaacccacagaagacatttgataatgtctgggggaaaattctggttgtcacaat--gaggaaaatggggtgctactggcatccagtgatagaggccag-gaagctgctaaacatcgtacaatgccctggattcctccca i canFam3.chr20 I 236 C 0 a score=8452.000000 s hg38.chrUn_KI270749v1 129887 3 + 158759 CCT s panTro5.chr3 202017074 3 - 202621043 cct i panTro5.chr3 C 0 N 0 s panPan2.chr3 204785099 3 - 205426864 cct i panPan2.chr3 C 0 N 0 s gorGor5.CYUI01007532v1 15067 3 - 17846 CCT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601766 3 + 86207423 cct i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 61014919 3 - 192460366 tct i macFas5.chr2 C 0 C 0 s chlSab2.chr22 64510621 3 - 101219884 cct i chlSab2.chr22 C 0 N 0 s otoGar3.GL873534 11084832 3 + 30473821 ccc i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618999 3 + 58134056 cct i canFam3.chr20 C 0 C 0 a score=-757.000000 s hg38.chrUn_KI270749v1 129890 3 + 158759 GAA- s gorGor5.CYUI01007532v1 15070 3 - 17846 AAA- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601769 3 + 86207423 caa- i nomLeu3.chr21 C 0 N 0 s macFas5.chr2 61014922 3 - 192460366 caa- i macFas5.chr2 C 0 N 0 s otoGar3.GL873534 11084835 3 + 30473821 aga- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16619002 3 + 58134056 -aat i canFam3.chr20 C 0 C 0 a score=2704.000000 s hg38.chrUn_KI270749v1 129893 9 + 158759 CATGAAGTA s gorGor5.CYUI01007532v1 15073 9 - 17846 CATGAAGTA i gorGor5.CYUI01007532v1 C 0 C 0 s otoGar3.GL873534 11084838 9 + 30473821 aaagaatta i otoGar3.GL873534 C 0 N 0 s canFam3.chr20 16619005 9 + 58134056 aatgaatta i canFam3.chr20 C 0 N 0 a score=64900.000000 s hg38.chrUn_KI270749v1 129902 764 + 158759 CACTTGGGGCAATAAAAGAAATCACCTCAAATCTTGCTGTGCGCCCCTCTGCGCCGGAGCCGGCGCCGTGCCCCTCTCTGCGCCTTCTTTTCTCACCATGGGGAAGCGTTTGGGGTCGTCTTGAGGGACCCCCTAGATGCTTCTACTCAGAGCCCCCAAAGCCGGGGAGCCTCCACTCCTCTGTCTGCAGCCTCCCCTGTCGGTTCTCGCTACCCAGGGTTCAGTGGCCTGGGGGCTGACGGAGGTGGTCGCCTCTGCCAAGGCCCCTCCCGGCACCTCCCTGGCTCATCCAGGCCACCTTCCTCCCAC-CTGGCTCACGCAAAGTGCTCTGGTCACCAGGAGCCCTTCCTGACCAGCCCCGGCCCCTTCTTGGCCTTCGCCCACCTGGCCTCCCCTGGAGCCCTGACCTGGGTGCCGGGCCTGCTGGGTCCAGAGCCCACCCCGCCCTGAACAACCCCGAGTCTCAGCCACCCTCAGCTCTTACCCTTTCACAGCTGGGGAGTGGAGCCTGGGcctgcgcctctctgcgcctgcgccgccgctgtgcccct-----------cgccgccgctgtccgcctctccgccgcg----------ccgccgctgtccgcctctccgccgcgccgccgctgaccgcctctccgccgcgccgccgctgtccgcctctccgccgcgccgccgctgtccgcctctccgccgcgccgccgctgtccgcctctccgccgcgccgccgctgaccgcctctccgccgcgccgccgctgtccgcctctccgccacgccg s gorGor5.CYUI01007532v1 15082 779 - 17846 CACTT-GGGCAATAAAAGAAATCACAGCAAATCTTGCTGTGCGCCCCTCTGCGCCGGAGCCGGCGCTGTGCCCCTCTCTGCGCCTTCTTTTCTCACCATGGGGAAGCGTTTGGGGGCGTCTTGAGGGACCCCCTAGATGCTTCTACTCACAGCCCCCAAAGCCAGGGAGCCTCCACTCCTCTGTCTGCAGCCTCCCCTGTCGGTTCTCGCTACCCAGGGTTCAGTGGCCTGGGGGCTGACGGAGGT-GTTGCCTCTGCCAAGGCCCCTCCCTGCACCTCCCTGGCTCATCCAGGCCACCTTCCTCCCACGCTGGCTCACGCAAAGTGCTCTGGTCACCAGGAGCCCTTCCTGACCAGCCCCGGCCCCTTCTTCGCCTTCGCCCACCTGGCCT-CCCTGGAGCCCTGACCTGGGTGCCGGGCCTGCTGGGTCCAGAGCCCACCCCGCCCTGAACAACCCCGAGTCTCAGCCACCCTCAGCTCTTACCCTTTCACAGCTGGGGAGTGGAGCCTGGGCCTgcgcctctccgcgcctgcgccgccgctgtgcgcctctccgcgcctgcgccgccgctgtgcgcctctccaccgccgtccgcctctccgccgccgtccgcctctccgccgcgccgccgccgtccgcctctccgccgcgccgccgccg-ccgcctctccgccgcgccgccgccg-ccgcctctccgccgcgccgccgccg-ccgcctctccgccgcgccgccgccg-ccgcctctccgccgcgccgccgccgaccgcctctccgccgcgccg i gorGor5.CYUI01007532v1 C 0 N 0 a score=9566.000000 s hg38.chrUn_KI270749v1 130733 116 + 158759 gcgagggcggagccgcgttctgctctgcacacaccttgggg-cactgcctcgctttgggacaactcggggccgcatcgacggtgaataaaatccttcctgtttgcagccctgTTtgt s panPan2.chrUn_NW_014019468v1 24105 117 + 66344 gcgagcgtggagctgcgttctgctctgcacagaccttgggggcactgcctcgctttgggacaactcggggccacatcgagggtgaataaaatccttcctgtttgcagccctgTTtgc i panPan2.chrUn_NW_014019468v1 N 0 C 0 a score=873.000000 s hg38.chrUn_KI270749v1 130849 3 + 158759 ggt s panPan2.chrUn_NW_014019468v1 24222 3 + 66344 ggt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s colAng1.NW_012115910v1 6724448 3 - 6934359 ggt i colAng1.NW_012115910v1 N 0 C 0 a score=31091.000000 s hg38.chrUn_KI270749v1 130852 82 + 158759 tggtggcagcgatggacactgcagccagccagagcgtagaaaggcatcggggtaagtgcactattca-ggctgcactgcgggt s panPan2.chrUn_NW_014019468v1 24225 82 + 66344 tggtggcagcgatggacactgcagccagtcagagcgtagaaaggcgtcggggtaagtgcgctatcca-ggctgcactgcgggt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s chlSab2.chr5 43285672 81 - 75399963 tggtggcagggaacgacactgcagctgtccagagcatagaaaggcatc--ggtaagcgcattttccagggctgcaccgcccgc i chlSab2.chr5 N 0 C 0 s colAng1.NW_012115910v1 6724451 83 - 6934359 tggtggcagccgcggacactgcagctggccagagcatagaaaggcgtcagagtgagtgcgctgtccagggttgcactgcccgt i colAng1.NW_012115910v1 C 0 C 0 a score=74086.000000 s hg38.chrUn_KI270749v1 130934 96 + 158759 ggcctgggacgggttgggagccctatctcaggtgtcactgcccgtcttgggtggctggttgggtgtgctatctggggctgtgctgcctgcaccgg----g s panPan2.chrUn_NW_014019468v1 24307 96 + 66344 ggcctgggacgggttgggagccctatctcaggcgtcactgcctgtcctgggtggctgtttgggtgtgctatctggggctgtgctgcctgcaccgg----g i panPan2.chrUn_NW_014019468v1 C 0 C 0 s chlSab2.chr5 43285753 95 - 75399963 ggcctggggtgggttgggagccctatctcaggcgtcactgcccatcttgggtggctggttgggtgtgccatct-gtgctgtgttgcctgcaccgg----g i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 66921 100 + 473220 ggcctggggtgagttgggggtcctatctcaggcatgactgcctgccttgggtgactggttgggtgcaccatctggggctgtgctgcctgcactggaggcg i manLeu1.NW_012099899v1 N 0 C 0 s colAng1.NW_012115910v1 6724534 96 - 6934359 ggcctgggacactttgggggccctatctcaggcgtcactgcccgccttgggtggctggttgggtgtgctatctggggctgtgctgcctgcaccgg----g i colAng1.NW_012115910v1 C 0 C 0 a score=31665.000000 s hg38.chrUn_KI270749v1 131030 32 + 158759 gggtg--gtttgggggcccaaaccggggctgcac s panPan2.chrUn_NW_014019468v1 24403 34 + 66344 gggggttgtttgggggcccaaaccggggctgcac i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 0 32 - 112215 gggcg--gtttgggggctcaaaccggggctgcac i gorGor5.CYUI01000689v1 N 0 C 0 s chlSab2.chr5 43285848 32 - 75399963 gggtg--ggttgggggccctatcctgggctgcac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67021 32 + 473220 gggtg--ggttgggggtcctatctggggctgccc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724630 32 - 6934359 gggtg--ggttgggggccttaaccggggctgcag i colAng1.NW_012115910v1 C 0 C 0 a score=539262.000000 s hg38.chrUn_KI270749v1 131062 372 + 158759 tgcctttggcggggagccggttgggggcactatcccagactgtattgctggcaacagtgaggtgggctaagtgtgctatccagggctgcactgtgcggctgtggggggtggggtggcggtttcgg-ttgagggcgctatggggtgctgtaatgcccatggtccagggaggcggggcggtttgggtatgttgggtgtgctattg-gggggggcgacactgctggt----ggtagggggcagggtgggttgggggc----catatcaggggctgcactgattgctttagctaggatttcaggtgctatgttaaacaacagtggtgacaaggggcatccttatcatgttcca--gatcttagaggaaaagctttccatttttcccca s panPan2.chrUn_NW_014019468v1 24437 369 + 66344 tgcctttggcgaggagctggttgcgggcactatcccagactgtattgctggcaacagtgaggtgggctaagtgtgctatccggggctgcactgtgcggctgtggggggt----tggcggtttcgggttgagggcgctatggggtgctgtaatgcccatggtgcggggaggtggggcggtttgggtatgttgggtgtggtattg-gggggggctacactgcaggt----ggtagagggcagggtgggttgggggc----catatcaggggctgcactgattgctttagctaggatttctggtactatgttaaacaacagtggtgacagcgggcatccttatcatgttcca--gatcttagaggaacacctttccatttttcccca i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 32 371 - 112215 tgcctttggcggggagccggttgggggcactatcccagactgtattgctggcaacagtgaggtgggttaagtgtgctatctggggctgcactgtgcggctgtggggggg--ggtggcggttttgggttgagggcgctatggggtgctgtaatgcccatggtgtggggaggcggggcagttagggtatgttgggtgtgctattg-gggggggcgacactgctggt----ggtagggggcagggtgggttgggggc----catatcaggggctgcactgattgctttagctaggatttctggtactatgttaaacaacagtggtgacagggggcatccttatcatgttcca--gatcttagaggaaaagctttccatttttcccca i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 682726 370 - 115148730 TGCCCTtggcggggagccggttgggggcactattccagacagtattgctggcaacagtgaggtgggctaagtgtgctatccggggctgcactgcgtggctgcatggggg---gtggcagttttgggttcagggccct-tgaggtgctgcaatgcccatggtgcggggaggcagggcggtttgggtgtcttgcgtgtgctgttgcggggggtctacactgctggt----ggcagggggcagggtgggttgggggc----catatcaggttctgcactgattgctttagctgggatttccagtactatgttaaacaacagtggtgacagtgggtatccttatcatgttcaa--gatcttagaggaaaagctttccattttttcccc i nomLeu3.chr7b N 0 I 1 s chlSab2.chr5 43285880 363 - 75399963 tgccctcggtggggagcgggttgggggcgctatccgagactgtattgacggcagcagtgaggtgggttaaggcttctatctgggcctgcactacccgg-tgtgggcggg---ggg-----tttgggttgagggcgctatggggtgctgcagtgcccacggtgcagggagg-ggggcggtttgcgtgtgttgggtgcgctattt-g-ggggtctacactgctgtt----ggcag-gggcggggtgggttgagggc----cgtatcaggggctgcagtgattgctttagctaggatttccagtactgtgttaaatgtcagtggtgacagtgggcatccttatcatgttccaagaatgttagaggaaaagctttccatttttcccca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67053 352 + 473220 tgccctccgcagcgagcgggttgggggcactatccgcgactgtattgacagcagcagtgaggtgggttaagggtgctatctgggcctgcactaccctt-tgtgggtggg---ggg------ttgggttgagggcgctatggagtgctgtagtgcccacagtgcggggaggcggggcggtttgggtgtgttggg-gtgctat--------------actgctggtggcgggcag-gggtggggtgggttgggggc----catatcaggggctgcactgattgctttagctaggatttccagtactatgttaaatagcagtggtgacagtgggcatccttgtcatgttcca--aatgttagaggaaaagctttccatttttcccca i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724662 374 - 6934359 tgcccttgttggggagccagttgggagcactatcccagactgtattgccggcagcagtggggtgggctaagtgtgctatccagggctgcactgcgcggctgtggggagg---gtggcggtttcgggttgagggcgctgtggggtgctcccaagcccatggtgcagggaggcggggcggtttgggtgtgttgggtgcgctgttg-gtgggagctacactgctggt----ggcagagggcagggtgggttgggaaccgtacgtatcaggggctgcactgattgctttagttaggatttccagtactacgttaaataacagtggtgacagtggacatccttatcatgttcca--gatcttagaggaaaagctttccatttttcccca i colAng1.NW_012115910v1 C 0 C 0 a score=1144815.000000 s hg38.chrUn_KI270749v1 131434 522 + 158759 ttccatatgattctagctgtgggtgtctttcctgtagtttttatt-atgttgcggtatgtttcttctgtgcctgtttctttgaggatttatagcatgaagggatgttgaatttcatcaaatgctttttcggtttcagttgacgtgatcatactgtttttgtcatttatttggttgatatgatgtatcacattgtatgttgagtgactcttgcatcccagggatacatcccacttgatcatgatgaattatctttttaatgtattactgaatttgattcactggtattttgttgaggatttttgcatcaatattagagatactggcctgtagtttccttctttgatgcttttatctgatttttgtatcacagtaataatggtctcatagaataagtttggaagtattccctcctgtttttcaaaatagtttgagcaggattcgtactaggtctttaaattgtttgctgtgaagccatcagcagtgaagacatcagttcctgggcttttctttactgggagactt s panTro5.chr22 3789424 507 + 37823149 ttccatatgattctagctgtgggtgtctttcctgtagtttttatt-atgttgtggtatgtttcttctgtacccgtttctttgaggattaatagcatgaagggatgttgaatttcatcaaatgctttttcagtttcagttgacatgatcatactgtttttgtcgtttatttggttgatatgatgtatcacattgtatgttgagtgacccttgcatcccagggatacatcccacttgatcatgatgaattatctttttaaggtattactgaatttgattcactggtattttgttgaggatttttgcatcagtattagagatactggcctgtagtttccttctttgatgcctttgtctgattttggtatcacagtaataatggtctcatagaataagtttggaagtattccctcctgtttttcaaaatagtttgagtaggattcgtactaggtcgttaaattgtttggtgtgaagccatcgg---------------ttcctgggcttttctttactgggagactt i panTro5.chr22 N 0 C 0 s panPan2.chrUn_NW_014019468v1 24806 520 + 66344 ttcc--atgattctagctgtgggtgtctttcctgtagtttttatt-atgttgtggtatgtttattctgtgcccgtttccttgaggatttatagcatgaagggatgttgaatttcatcaaatgctttttcagtttcagttgacgtgatcatactgtttttgttgtttatttggttgatatgacgtatcacattgtatgttgagtgacccttgcatcccagggatacatctcacttgatcatgatgaattatctttttaatgttttactgaatttgattcactggtattttgttgaggatttttgcatcaatattagagatactggcctgtagtttccttctttgatgcctttgtctgattttggtatcacagtaataatggtctcataaaataagtttggaagtattccctcctgtttttcaaaatagtttgagcaggatttgtactaggtctttaaattgtttggtgtgaagccatcagcagtgaagacatcagttcctgggcttttctttactgggagactt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 403 521 - 112215 ttccatatgattctagctgtgggtgtctttcctgtag-ttttatt-atgttgcggtatgtttcttctgtgcccgtttctttgaggatttatagcatgaagggatgttgaatttcatcaaatgctttttcggtttcagttgacatgatcatactgtttttgtcgtttatttggttgatatgatgtatcacattgtatgttgagtgactcttgcattccagggatacatcccacttgatcatgatgaattatctttttaatgtattactgaatttgattcactggtattttgttgaggatttttgcatcaatattagagatcctggcctgtagttttcttctttgatgcttttatctgattttcgtatcacagtaataatggtctcatagaataagtttggaagtattccctcctgtttttcaaaatagtttgagcaggattcgtactaggtctttaaattgtttggtgtgaagccatcagcagtgaagacatcagttcctgggcttttctttactgggagactt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 683097 522 - 115148730 ttccatctgattctagctgtgggtgtctttcttgtagtttttatt-atattgcagtgtgtttcttctgtacccatttttttgaggatttatagcatgaagggatattgaatttcatcaaatgctttttcagtttcagttgacatgatcatactgcttttgtcgtttatttggttgatgtgatgtatcacattgtatgctgagtgacccctgcatcccagccatacatcccacttgatcatgatgaattatcttttttatgtattactgaatttgattcactggtattttgttgaggatttttgcatcagtattagagatactagcctgtagtttccttctttgatgcctttgtctgattttggtatcacagtaataatggtctcatagaataagtttggaagtattccctcctgtttttccaaatagtttgagtagggttggtactaggtctttaaattgtttggtgtgaagccatcagcagtgaagacatcagttgctgggcttttctttaccaggagactt i nomLeu3.chr7b I 1 C 0 s chlSab2.chr5 43286243 521 - 75399963 ttgaatataattctagctgtgagtctctctcatgtggtttttatt-atggtgaggtatgtttcttctgtacctggttttttgaagatttatagcatgaagggatgttgagtttcatcaaatgctttttcagtttcaatggacatgatcatactgtttttgtcttttatttgtttgatatgatgtatcacattgtgtgttgaatgatgcttgcatcccagggatacatcccacttgatcataatgaattatctttataatgttttgctgaatttgatttgctggtattgtgttcaggatttatgcatcaatattaaagatattggcctgtagtttctgtctttgatgtctttgtctgactttggtatcagggtagtaatgaccgcatagaatgagtttggaagtattctctccagttttttaaaatagtttgagtaggattggaactgggtctttaaat-gtttgatgtgaagtcatcagcagtgaagccatcaattcctgggcttttctttaatgggagacgt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67405 521 + 473220 ttccatataattctagctgtgagtctctctcatgtggtttttatt-atggtgaggtatgtttcttgtgtacttggttttttgaggatttatagcatgaagagatgttgaatttcatcaaatgctttttcagtttcaatggacatgatcatactgtttttgtcctttatttggttgataaggtgtatcacattgtgtgtcgaatgatccttgcatcccaggagtacatcccacttgatcataatgaattatctttataatgtattgctgaatttgatttgctggtgttgtgttcaggatttatgcatcagtattagagatgctgacctgtagtttccttctttgatgtcttagtctgactttggtatcagggtaataatggcctcatagaataagtttgggagtattctctcctgttttttaaaatagtttgagaaggattggtactaggtcttcaaat-gtttggtgtgaagccatgagcagtgaagccatcaattcctgggcttttctttactgggagacat i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6725036 523 - 6934359 ttccgtgtgattctggctgtgggtgtctctcatgtggtttttattaatgttgcgatatgtttcttctgttccaatttttttgaggatttatagtgtgaagggatgttgaatattattaaatgttttttcagtttcaattaacgtgatcatacagtttttgtcttttatttggttgatatgatgtatcacattgtacgttgaatgacctttgcatcccagggatacatcccacttgatcatgatgaattatcttttcaatatattgctgaatttgattcactggtattttgttgaggatttttgcatcaacattggagatactggcctgtagtttccttctttgatgtcgttgtctgattttggtatcagggtaataatggtctcatagaataagtttggaagtattccctcctgtttttcaaagtagtttgagtaggattggtactaggtctttatatcgtttggtgtgaagccatcagcagtgaagccatcagttcctgggcttttctttactgggagactt i colAng1.NW_012115910v1 C 0 C 0 a score=611826.000000 s hg38.chrUn_KI270749v1 131956 212 + 158759 tttctgatggcttcaatctcattacttgttaccaatctgttctggtcttggatgttttcattgttttacctaagtaggttgtatgcatctaggaatttgccaatttctactaggctttccaatttattggcatataatagccagttatgatcctttgaatttct-gaagtattagttgtaatgtctcc-tttttttaatctgttgattttattt s panTro5.chr22 3789931 211 + 37823149 tttctgatggcttcaatctcattacttgttaccaatctgttctggtcttggatgttttcattgttcaacctaagtaggttgtatgcatctaggaatttgccaatttctactaggctttccaatttattggcatataatagccagttatgatcctttgaatttct-gaagtattagttgtaatgtctcc-ttttttta-tctgttgattttattt i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 25326 212 + 66344 tttctgatggcttcaatctcattacttgttaccaatgtgttctggtcttggatgttttcattgttcgacctaagtaggttgtatgcatctaggaatttgccaatttctactaggctttccaatttactggcatgtaatagccagttatgatcctttaaatttct-gaagtattagttgtaatgtctcc-ttttcttaatctgttgattttattt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 924 212 - 112215 tttctgatggcttcaatctcattacttgttaccaatctgttctggtcttggatgttttcattgtttaacctaagtaggttgtatgcatctaggaatttgccaatttctactaggctttccaatttattggcatataatagccagttatgatcctttgaatttct-gaagtattagttgtaatgtctcc-tttttttaatctgttgattttattt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 683619 211 - 115148730 tttctaatggcttcaatctcattacttattaccagtctgttctggtcttggatgctttcattgttcaacgtaggtaggttgtatgcatctaggaatttgccaatttctactaggctttccaatttattggcatgtaatagccagttatgatcctttgaatttct-gaaatatcagttgtaatgtctcc-ttttttta-tctgttgattttattt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22608 211 - 38383 tttctgatggcttcaatctcattacttgttaccaatctgttctggtcttgcacgtttttactgttcaacctaagcaggttgtatgcgtctagaaatttgtcaatttctactaggcttttcaatttgttggcgtatgatagccagttatgatcctttgaatttct-gaagtatcagttgtaatgtcttc-ttttttta-tctgttgattttgttt i cerAty1.NW_012006010v1 N 0 C 0 s chlSab2.chr5 43286764 213 - 75399963 tttctgatggcttcaatctcattacttgttaccgatctgttctgattttggatgtattcacggtttaacctaggtaggttgtatgtgtctaggaatttgtcaatctctactaggctttccagtttattggcatataatagccagttatgatcctttgaatttctagaagtaccacttgtaatgtctcctttttttta-tctcttgatttcattt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67926 211 + 473220 tttctgatggcttcaatctcattacttgttactgatttgttctgattttggatgttttcactgttcaatctaggtaggttgtatgcatctaggaatttgtcagtttctactaggctttccaatttatcggcatataatagccagttatgatcctttgaatttctagaagtatcagttgtgatagctcc--tttttta-tctcttgattttattt i manLeu1.NW_012099899v1 C 0 I 77 s colAng1.NW_012115910v1 6725559 209 - 6934359 --tctgatggcttcaatctcattacttgttaccaatctgttctggtcttgcacgtttttactgttcaacctaagtaggttgtatgcgtctagaaatttgtcaatttctactaggctttccaatttattggcatatgatagccagttatgatcctttgaatttct-gaaatatcagttgtaatgtcttc-ttttttaa-tctgtcaattttattt i colAng1.NW_012115910v1 C 0 C 0 a score=140447.000000 s hg38.chrUn_KI270749v1 132168 71 + 158759 atttgaatct--tgtctc---tttt--cttag----gctggttaaaagtttgtcaattttgtttagctttccagaaaaccaa s panTro5.chr22 3790142 77 + 37823149 atttgaatct--tgtctc---ttttttcttagttatcctggttaaaagtttgtcaattttgtttagctttccagaaaaccaa i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 25538 71 + 66344 atttgaatct--tgtctc---tttt--cttag----cctggttaaaagtttgtcaatgttgtttagctttccagaaaaccag i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1136 71 - 112215 atttgaatct--tgtctc---tttt--cttag----gctggttaaaagtttgtcaattttgtttagctttccagaaaaccaa i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 683830 78 - 115148730 atttgagtct--tgtctcatttttt--tttagttagccttgttaaaagtttgtcaattttgtttagctttccagaaaaccaa i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22819 67 - 38383 ----gaatct--tgtgtt---tttt--cttag----cctggttaaaagtttgtcaattttgtttagctttccagaaaaccaa i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43286977 69 - 75399963 ----gagtcttctctctt---tttc--cttag----gctggctaaaagtttctcagttttgtttagctttgcagaaaaccaa i chlSab2.chr5 C 0 C 0 s colAng1.NW_012115910v1 6725768 73 - 6934359 gtttgaatcttctgtttt---tttt--cttag----cctggttaaaagtttgtcaattttgtttagctttccagaaaaccaa i colAng1.NW_012115910v1 C 0 C 0 e manLeu1.NW_012099899v1 68137 77 + 473220 I a score=4239151.000000 s hg38.chrUn_KI270749v1 132239 1587 + 158759 cttttcgtttaatcttgtgtgtttttt--atttcaattttgtttctgctacgatcttagt----tattttcttatttttggtttagtttgttcttactttactagttctttaagatgtattgtttatttgaagtttttcttttgtttggatggtaggcacttata-------------gctgt----------------aaatctctgcctttgtactgctttctgcgtaac--aagttttggtatactgtgttttcattaccctttgtttcatgaaatttttgaatttctgtcttagtatcttcattgacccgctagtcatttattcaggagggtagtatttaacttccatgtgattgtattgtttccaaaattacttttcttattgatacctagttttattcctttgtagtgaaagaagatggccacagagacagacagcagcgtggttagagtggtaggagccggccatcagcgagagctgctccatgcctggctgctgggtgctagagcctgcggccc-actggcttgcctcactgtggttggtggtggcagtaacagagactgcagcacaaccagagtggtaggacaggggctatccagggctgcacctttcgcagtgtggggtgggttgggggcgctatccagggtgtcattgcctgcattaggggtactggttggtagcactccacagggctgcactacccacggcagggagggtgggttatgggtgctttctggggctgcagtgcccatggaggaggacaggttagggcactatcgggtatacgctactggcagcattgggggacggaggtggggggcgctattgagggcaggactagccgtggagggcgggcgagttcggtgctatcaggggctgcactgctggcggcggTCAACAGAG---------------TTGGCATCCAAGGAAGGAGTGGTTCTCCTCTCCCT-GACTCCACACTCCAGAGGGCAACCCACTCTTGGTCATACTGGAGTGTGGCAGGGCA-CGCAGCGTTTGCATGGGAATCCTGAGCATGGCAGAGCCCCCACACCCACCGTGGTTCCTGGGCCTGTGCACTCTCGGTCTGTGCCTCAGAGGCTGCCAGGCA-CCCCTGG-----------GGACACCACGGGGGACAGGGCCCTGTGCGTGGAGGCGTCCAGAACAGGAATTGGCACCTGGGTGTGGAGGGCT-GGCTGGGTCTGAATTTTTCTGCTTCTCCTGTTCCCCGAGGAGTGCAGCCCCGGTGGGCCCAATGGTTCCTGTGGAGTGGGGAGCTGGAATCTGTGGTGTCTCCAGCACCCACCCCAGACCCCAGTTCCCAGACAGCTTGGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTGCCACCCAGTGGCTGGCATGACAAGTTGAGGCT-CTAACCCTTCCACTCCTCACAACTTCCtctaggcttttctggctttgcccgcccagctgctccgtgccaggaagaggaggagacacctagagcctgcaacaccacggctcgcctcgctgcaggtggatggcagtgacggagactgcagtgcgccagagcggtaggagagcggccgcgctaggagggcaggcggctgcaggcagggttgg s panTro5.chr22 3790219 1571 + 37823149 cttttcatttaatcttgt----ttttt--ctttcaattttatttctgctacgatcttatt----tattttcttattttcggtttagtttgttctt----tactagttctttaagatgtattgtttatttgaagtttttcttttgtttggatggtaggcacttata-------------gctgt----------------aaatctctgcctttgtactgctttctgcataac--aagttttgggatactgtgttttcattgccatttgtttcatgaaatttttgaatttctgtcttagtatcttcactgacccgctagtcatttattcaggagggtagtgtttaacttccatgtgattgtattgtttccaaaattactcttcttattgatatctagttttattcctttgtagtcaaagaagatggccacggagacag----cagcgtggtcagagtggtaggagctggccatcggcgagagctgctccatgcctggctgctgggtgctagagcctgtggccc-actggcttgcctcactgtggttggtggtggtggtgacagagactgcagcacgaacagagtggtaggacaggggctatccagggctgcacctttcgcagtgtggggtgggttgggggcactatccagggtgtcattgcctgcattaggggtactggttggtagcactgtacagggctgcactgcccacggcagggagggtgagttatgggcactttctggggctgcaatgcccatggaggaggacaggttaggacactatcgggtatacgctac-ggcggcattgggggatggaggtggggggcgctattgagggcaggactagccatggagggcgggcgagtttggtgctatcaggggctgcactgctggcagcggTCAGCAGAG---------------TTGGCATCCAAGGAAGGAGTGGTTCACCTCTCCCT-GACTCCACACTCCAGAGGGCGACCCACTCTTGGTCATACTGGAATGCGGCAGG-CA-TGCAGTGTTTGCGTGGGAATCCTGAGCACGGCAGAGCCCCCACACCCACCATGGTTCCTGGGCCTGTGCACTCTGGATCTGTAACTCAGAGGCTGCCAAGCA-CCCCTGG-----------GGACACCACGGGGGACAGGGCCCTGTG--TGGAGGCATCCGGAACAGGAATTGGCACCTGGGTGTGGAGGGCT-GGCTGGGTCTGAATTTTTCTGCTTCTCCTGCTCCCCGAGGAGTGCAGCCCCAGTGGGCCCAATGGTTCCTGTGGAGTGGGGAGCTGGGTGCTCTGATGTCTCCAGCACCCACCCCAGACCCCAGTTCCCGGCCAGCTTGGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTGCCACCCAGTGGCCAGCATGACAAGTTGAGGCT-CTAACCCTTCCACCCCTCACATCTTCCtctaggcttttctggctttgcccgcccagctgctccgtgccaggaggaggaagagatacctagagcctgcgagaccacgacttgcctcactgcgggtgggtggcagcgacggagactgcagtgcaccaaagcagtaggagagcggccgtgctaggagggcaggcggcTGCAGCCAGGGTTGG i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 25609 1580 + 66344 cttttcgtttaatcttctgtgtttttt--ctttcaattttatttctgctacaatcttatt----tattttattaatttcagtttagtttgttcttactttactagttctttaagatgtattgtttatttgaagtttttcttttgtttggatggtaggcacttata-------------gctat----------------aaatctctgcctttgtactgctttctgcgtaac--aagttttggtatcctgtgttttcattaccctttgtttcatgaaatttttgaatttctgtcttagtatcttcattgacctgctagtcatttattcaggagagtagtgcttaacttccatgtgattgtattgtttccaaaattactcttcttattgatacc-agttttattcctttgtagtcaaagaagatggccacagagacag----cagcgtggtcagagtggcaggagccggccatcagcgagagctgctccatgcctggctgctgggtgctagagcctgcggccc-gctggcttgcctcactgtggttggtggtggtggtgacagagactgcagcacgaccagagtggtaggacaggggctatccagggctgcacctttcgcagtatggggtgggttgggggcgctatccagggtgtcattgcctgcattaggggtactggttggtagcactgtacagggctgcactgcccacagcagagagggtgggttatgggtgctttctggggctacaatgcccatggaggaggacaggttagggcactatcgggtatatgctactggcggcattgggggaccgaggt-gggggtgctattgagggccggactagctgtggggg--gggtgagttcggtgctatcaggggctgcactgctggcagcggTCAGGAGAG---------------TTGGCATCCAAGGAAGGAGTGGTTCTCCTCTCCCT-GACTCCACACTCCAGAGGGCGACCCACTCTTGGTCATATTGGAGTGCAGCAGGGCACCACAGCATTTGCGTGGGAATCCTGAGCATGGCAGAGCCCCCACACCCACTGTGGTTCCTGGGCCTGTGCACTCTGGGTCTGTGCCTCAGAGGCTGCCAGGCA-CCCCTGG-----------GGACACCACGGGGGACAGGGCCCTGTGTATGGAGGCGTCCAGAACAGGAATTGGCACCTAGTTGCGGAGGGCT-GGCTGGGTCTGAATTTTTCTGCTTCTCCTGCTCCCCGAGGAGTGCAGCCCCAGTGGGCCCAATGGTTCCTGTGGAGTGGGGAGCTGGGTGCTGTGGTGTCTCCAGCACCCACCCCAGACCCCAGTTCCCAGCCAGCTTGGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTGCCACCCAGTGGCCAGCATGACAAGTTGAGGCT-CTAACCCTTCCACCTCTCAAATCTTCCtctaggcttttctggctttgcccacccagctgctccgtgccaggaggaggaggagacacctagagcctgcaacaccacggctcgcctcgctgcaggtgggtggcagcaatggagactgcagtgcgccaaagcagtaggagagCGGCCACGCTAGGAGGGCAGGCAGCTGCAGCCAGGGTTGG i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1207 1582 - 112215 cttttcgtttaatcttgtgtgtttttt--atttcaattttgtttctgctacgatcttatt----tattttcttattttcggtttagtttgttcttactttactagttctttaagatgtattgtttatttgaagtttttcttttgtttggatggtaggcacttata-------------gctgt----------------aaatctctgcctttgtactgctttctgcgtaac--aagttttggtatactgtgttttcattaccctttgtttcatgaaatttttgaatttctgtcttagtatcttcattgacccgctagtcatttattcaggagggtagtgtttaacttccatgtgattgtattgtttccaaaattacttttcttattgatacctagttttattcctttgtagtgaaagaagatggccacggagacagacagcagcgtggtcagagtggtaggagccggccatcagcgagagctgctccatgcctggctgctgggagctagagcctgcggccc-actggcttgcctcactgtagttggtggtggcggtgacagagactgcagcatgaccagagtggtaggacaggggctatccagggctgcacctttcgcagtgtggggtgggttgggggc-ctatccagggtgtcattgcctgcattaggggtactggttggtagcactgcacagggctgcactgcccacggcagggagggtgggttatgggtgctttctggggctgcaatgcccatggaggaggacaggttagggca-tatcgggtatacgctactggcggcattgggggacggaggtgaggggcgctattgagggcaggactagccgtggagcgggggcgagttcggtgctatcaggggctgcactgctggtggcagTCAACAGAG---------------TTGGCATCCAAGGAAGGAGTGGTTCTCCTCTCCCT-GACTCCACACTCCAGAGGGCGAACCACTCTTGGTCATACTGGAGTGCGGCAGGGCA-CGCAGCGTTTGCATGGGAATCCTGAGCATGGCAGAGCCCCCACACCCACCGTGGTTCCTGGGCCTGTGCACTCTGGGTCTGTGCCTCAGAGGCTGCCAGGCA-CCCCTGG-----------GGACACCACGGGGGACAGGGCCCTGTGTGTGGAGGCGTCCGGAACAGGAATTGGCACCTGGGTGCGGAGGGCT-GGCTGGGTCTGAATTTTTCTGCTTCTCCTGTTCCCCGAGGAGTGCAGCCCCGGTGGGCCCAATGGTTCCTGTGGAGTGGGGAGCTGGGTGCTGTGGTGTCTCCAGCACCCACCCCAGACCCCAGTTCCC-GCCAGCTTGGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTGCCACCCAGTGGCCGGCATGACGAGTTGAGGCT-CTAACGCTTCCACTCCTCACAACTTCCtctaggcttttctggctttgcccgcccagctgctccgtgccaggaggaggaggagacacctagagcctgcaacaccacggctcgcctcgctgcgggtgg-tggcagtgacggagactgcagtgcgccagaacggtaggagagcggccgcgctaggagggcagg-ggctgcaGGCAGGGTTGG i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 683908 1579 - 115148730 cttttcgtttaatcttgtgtg-atttt--atttcaattttatttctgctacgatcttatt----tattttcttatttttggtttagtttgttcttactatactagttctttaagatgtattgtttatttgaagtttttcttttgtttggatggtagactcttata-------------gcttt----------------aaatctctgcctttgtcctgctttctgtgtaac--aa-ttttggtatattgtgttttcattaccctttgtttcatgaaatctttgaatttccatcttagtatcttcattgacccaccagtcatttattcaggagagtagtgtttaacttccctgtgattgtattctttccaaagttactcttcttattgatacctagtttcattcctttgtagtcaaagaagaCggccacggagacag----cagcgtggtgggagtggtaggagcgggccatcagcgagagctgctccctgcctggctgctgggtgctagagcctatgtccc-actggcttgcctcactgtggttggtggtggcggtgacagagactgcagcacgaccagagtggtaggacaggggctatccagggctgcacctttcgcagtgtggggtgggttgggggcgctatccagggtgtcattgtctgcattaggggtactggttggtagcactgtacagggctgcactgcccacggcagggagggtggattatgggcgctttctggggctgcaatgcccatggaggaggacaggttagggcactatcgggtatatgctactggcagcattcggggatggaggtggggggcactatttagggcaggagtagctgtggatagggggcgagttcattgctatcagtgactgcactgctggtggcagTCAGCAGAG---------------TTGGCATCCAAGGAAGGAGTGGTTCTCCTCTCCCT-GACTCCACACTCCAGAGGCCGATCTACTCTTGGTCATACTGGAGTGCGGCAGG-TG-CACAGCGTTTGCGTGGGAATCCTGAGCATGGCAGAGCCCCCACACCCACCGTGGTTCCTGGGCCTGTGCACTCTGAGTCTGTGCCTCAGAGGCTGTCAGGCA-CCCCTGG-----------GGACACCACGGGGGACAGGGCCCTGTGCGTGGAGACGTCTGGAACAGGAATTGGCACCTGGGTGTGGAGGGCT-GGCTGGGTCTGAATTTGTCTGCTTCTCCTGCTCCCCGAGGAGTGCAGCCCGGGTGGGCCCAATGGTTCCTGTGGAGTGGGGAGCAGGGTGCTGTGGTGTCTCCA-CACCCACCCCAGACCCCAGTTCCTAGCTAGGTTGGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTGCCACCCAGTGGCCGGCATGACATGTTGAGGCT-CTAACCCCTCCACCCCTCACATCTTCCtctaggcttttctggctttgcccgcccagctgctccatgccaggaggaggaggagacacctatagcctgcaacaccatggctcgcctcattgcaggtgggtggcagcgacagagaccgcagtgcaccggagcagtaggagagTGGCCATGCTAGGAGGGCAGGTGGCTGCAGCCAGGGTTGG i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22886 1603 - 38383 gtttttgtttaatcttttgtactttttt-atttaaattttatttctgctatgatcttattttcttattttcttcttttgggtttagtttgtcctt-----actagttctttaagatatattgtttatttgaagtttttcttttgtttggatggtaggcacttcta-------------gctat----------------aaatctctgcctttgtactgctttctgtgtaacgtaagttttgctgtattgtgttttcattaccatttgtttcataaaatttttcaatttctgtcttagtatcttcattgacccactagtcattcattcaggagcgtattgtttaacttccatgtgattgtatggttttcaaaattactcttcttactgatacctagttttattcctttgtagtcaaagaagatggccatggagacag----cagcgtggttggagtggtaggagccggccatcagcgagagctgctccgggcctggctgctgagtgctagagcctgcggccc-agtggcttccttcactgtggttggtggtggtggtgacagagactgcagcatgaccacagtggtagggcaggggctatc-ggggctgcacttttgacagtgtggggtgggttgggggcactatccagggtgtcattgcttgcatcgggggtactagttggtagcactgtagagggctgcactgcttacagtacagggggtgggttataggcactttctggggccacaatgcccatggaggaggacaggtaaaggcactatcgggtatacgctagtggcgactttggggggtggaggtggggtgcgctattgagggcaggactggccgtgaagcgggggtgagttcggtgctatcaggggctgcactgctggcggcagTCAGCAGAGTTGGCAGCAACAGT-GTGGCATCCAAGGAAGGAGCGGTTCTGCTCTCCCTGGACGCCACACTCCAGAGGGCCACCTACTCTTGCTCATACTGGAGCATGGCAGG-CG-CACAGTGTTTCCGTGGGAATCCTGAGCGTGGCAGAGACCCCACACCCACCGTGGCTCCTGGGCCCGTGCACTCTGGGTCTGTGCCTTAG-GGCTGCCAGGCG-CCCAGGGTATGGAGTAGCAGACACCATGGGGGAAAGGGCCCTGTGCGTGGAGACATCCAGAACAGGAATTGGCACCTGGGTGTGGAGGGCTGGGCTGGGTCTGAATTTTTCTGCTGCTCCTGTTCCCCGAGAATTGCAGCCCCAGTGGGCCCAGTGGTTCCTGTGGAGTGGGGAGCTGGG------CGTGTCTCCAGCACCCACTCCAGGCCCCAGTTCCTGGCCAGCTTGGGCCAAAAGGAGAGGCTGAACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTACCACCCAGTCCCTGGCATGACAAGTTGAGGCTCCTAATGATACCACCCCTCACATCTTCCtctaggcttttctggctttgcccgcccagctgctctgtgccaggaggaggaggagacacctggagcctgtgacaccacggtttcccttgctgagggtgggtggcagcgacggagactgcagcgtgctggaacggtaggagagtgaccacactaggaggtcaggcggccagagccagggtgg- i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43287046 1637 - 75399963 ctttttgtttaatcgtttgtatttttttcatttcaattttatttttgttacgatctttattatctcttctcttattttgggtttagttcttactt----gactagttctttaagatgtattgttcatttgaagtttttcttctgtttggatggtgggccattgtactgcttttgtactgccattgtacaaaaagaaaaaaagtttctgccattgtactgctttctgcatatcgtaagttttggtatattgtgttttcattaccatttgtttcaggaaatttttgaatttctatcttagtatgttcattggccaactagtcattcattcagaagtgtattgcttaacttccatgtgattatatagtttccaaaatttcttttcttattgatatctagttttattcctttgtagtcaaagaaCAtggccatggagacag----catcatggtcagagtggtaggagggagccatcagcaagagctgctccaggccaggctgctgggtgctagagcctgcagccctggcggcttgcctcactgtggtttgtggtgatggcgacagagactgcagcacgaccagagtggtaggacagggactatccggggctgcactttttacagtagggggggggttaggggcactatccggggtgtcactgcctgcgttgggggtactggttggtagcactatacagggctgcgctgcccatgg--ttgggggtgggttatgggccctctctggggctgcattgcccatggagggggacaggttagggcactatcggatatacgctgctgtcagcattgtggggtggaggtgggggatgctattaagggcaggactacctgtggag-aggggcgagttgggtgctatcaggggctgcgctgctggtggcagTCGGCAGAGGTGGCAGCAACAGTGGTGGCATCCAAGGAAGGAGTGGTTCTCCTCTCCCTGGACTCCACACTCCAGAGGGCGACCTATTCTTACTCATACTGGAGTGCGGCAGG-TG-CACAGTGTTTCCGTGGGAATCCTGAGCATGGCAGAGCCCCCACACCCGCCATGGTTCCTGGGCCCATGCACTCTGGGTCTGTGCCGCAGACACTGCCTGGCACCCCCAGGTATGGAGTTGCGGACACCATAGGGGACAGGGCCCTGTGTGTGGAGGCATTGGGAACAGGATATGGCACCTGGGTGGGGAGGGTT-GGCTGGGTCTGAG--TTTCTGCTGCTCCTGCTCCCCGAGGAGTGCAA-CCCAGTTGGCCCAGCAGTTCCTGTGGAGTGGGGAGCTGGGGGCTGTGGCGTCTCCAACACCCACACCATGCCCCAGTTCCTGGCCAGTGTGGGTCAAAAGGAGAGGCTGAACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTGCCACCCAGTGGCTGGCATGACAAGGTGAGGCT-CTAACGCTACCACCCC-TGCATCTTCCtctaggcttttctggttttgcccacccaactgctccatgccaggaggaggtggaaacacctggagcctgcgacaccatggctcgcctcactgtggcttggtggtggcgacagagactgcagtgtgctggagtggtaggagggcagccacgctaggagggcaggtggctgtggccagggctga i chlSab2.chr5 C 0 I 68 s manLeu1.NW_012099899v1 68214 1599 + 473220 cttttggttaaacctttggaatttttt--atttcaattttgtttttgttatgatctttatcatctattctcttattttaagtgtagtttgttctc-----actagttctttaagatgtattg-----ttggaagtttttttctgtttggatggtaggcacttatg-------------gctat----------------aaatttctgcttttgtactgctttctgcatatcataagttttggtatattgtgttttcattaccatttgtttcaggaaatgtttcagtttccatcttagtatcttcattgaccaactagtcattcattcagcagtgtattgtttaactttaatgtgactatatactttccaaaattccttctcttattgatatctagttttattcttttgtagtcaaagaagatggccatggagacag----catcatgatcagagtggtaggaggcagccatcagcaagagctgctctgtgcccagctgctgggtgctagagcctgcagccc-agtggcttgcctcattgcggttgatggcggtgacgacagagactgcagcacaaccaaagtggtaggacaggagctatctggggctgcacttttcgcagtgtggggtgggttgggggtgctatccggggtgtcactacctgcattgggggtactggctggtagcactatacacggctgcactgcccacgg--cggtgggtgagtcatgggcactctttggggctgcaatgcccatggtgggggacaggttagggcactatcagatatacgctgctctcagcattgtggggtggaggtggggg-tgctattgagggcaggactacctgtggag-aggggcgagttgggtgctatcaggaactgcactattggcaacagtcggcagAGGTGGCAGCAACAGTGGTGGCATCCAAGGAAGGAGTGGTTCTCCTCTCCCTGGACTCCACACTTCAGAAGGCGACCTACTCTTACTCATACTGGAGTGCGGCAGG-CA-CACAGTGTTTCCGTGGGAATCCTGAGCATGGCAGAGCCCCCACACCCACCATGATTCCTGAGCCCATGCACTCTGGGTCTGTGCCGCAGAGACTGCCTGGCTATCCCAGGTATGGAGTAGCGGACACCACGGGGGACAGGGCCCTTTGCGTGGAGGCATCCGAAACAGGAATTGGCACCTGGGTGGGGCGGGCT-GTCTGGGTCTCAG--TTTCTGCTGCTCCTGCTCCCCAAGGAGTGCAA-ACCAGTTGGCACAGCGGTTCCTGTGAAGTGGGGAGCTAGGGGCTGTGGCGTCTCCAACACCCACGCCATCCTCCAGTTCCTGGCCAGCTTGGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGCCCCCTGCCACCCAGTGGCTGGCATGACAAGGTGAGGCT-CTAACGCTACCACCCCTTGCATCTTCCTCTAGGCATTTCTGGCTTTGCCTACCCaactgctccatgccaggaggaggaggaaacacctggagcttgtgacactgtggttcacttcactgcagcttggtggtggcaacagagactgcagcacgccagagcggtaggagggcagccatgctaggagggcaggtgtctgcggccagggctga i manLeu1.NW_012099899v1 I 77 I 62 s colAng1.NW_012115910v1 6725841 1593 - 6934359 ctttttgtttaatcttttgtactttttt-atttaaattttatttctgctgtgatcttattttcttattttgttattttgggtttagtttgtcctt-----actagttctttaagaggtattgtttatttgaagtttttcttttgtttggatgataggcacttata-------------gctat----------------gaatctctgcctttgtactgctttctgtgtaatgtaagttttgctgtattgtgttttcattaccatttgtttcataaaatttttcaatttctgtcttagcatcttcattgacccactagtcattcattcaggagtgtattgtttaaattccatgtgattgtatggttttcaaaattactcttcttactgatacctagttttattcctttgtagtcaaagaagatggccatggagacag----cagcgtggttggagtggtaggagccggccatcagtgagagctgctctgggcctggctgctaagtgctagaacctgcagccc-agtggcttccttcactgtggttggtggtggcggtgacagagactgcagcatgatcaaagtggtagggcaggggctatc-ggggctgcacttttcgcagtgtggggtgggttgggggcactatccagggtgtcattgcctgcattgggggtattagttggtagcactgtagagggctgcactgcctatggtgcggggggtgggttatgggcactttctggggccgcagtgcccatggaggaggacaggtaaaggcactgtcgggcatacgctactggtggcgttggggggtggaggtagggtgcgctattgagggcaggactggccgtgaagcggggatgagtttggtgctgtcaggggctgcactgctgggggcagTCAGCAGAGTTGGCAGCAACAGT-GTGGCATCCAAGGAAGGAGCAGTTCTCCTCTCCCTGGACTCCACACTCCAGAAGGCCACCTACTCTTGCTCATACTGGTGCATGGCAGG-CG-CACAGTGTTTCCGTGGGAATCCTGAGCGTGGCAGAGCCCCCACACCCACTGTGGCTCCTGGGCCCATGCACTCTGGGTCTGTGCCTTAGAGGCTGCCAGGCG-CCGCGGGTATGGAGTAGCAGACACCATGGGGGACAGGGCCCTGTGCATGGAGGCATCCGGAACAGGAATTGGCACCTGGGTGTGGAGGGAT-GGCTGGGTCTGAATTTTTCTGCTGCTCCAGTTCCCTGAGGAGTACAGCCCCGGTGGGTCCAGTGGTTCCTGTGGAGTGGGGAGCTGGGCACTGTGGTATCTCCAGCACCTACTCCAGGCCCCAGTTCCCAGCCAGCTTGGGCCAAAAGGGGAGGCTGAACTTTGGAGGGTGGGTGCGAGTG-----------------CCCTGCCACCCAGTCCCTGGCATGACAAGTTGAGACTCTTAATGCTACCACCCCTCGCATCTTCCTGTaggcttttctggctttgtcttcccagctgctctgtgccaggaggaggaggagacacctggagcctgtgacaccatggcttgcctcgctgagggtgggtggcagcgacggagactgcagcgtgctggaacggtaggagagtgaccgtgctaggaggtcaggcggctggagCCAGGGTTGG i colAng1.NW_012115910v1 C 0 C 0 a score=48042.000000 s hg38.chrUn_KI270749v1 133826 23 + 158759 gagTCAGGCTTACAGCGATGGAC s panTro5.chr22 3791790 23 + 37823149 GGGTCAGGCTTACAGCGATGGAC i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27189 23 + 66344 GGGTCAGGCTTACAGCGATGGAC i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2789 23 - 112215 GAGTCAGGCTTACAGCGATGGAC i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 685487 23 - 115148730 GGGTCAGGTTTACAGTGATGGAT i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24489 23 - 38383 gggTCAGGCTTAGAGCAATGGCC i cerAty1.NW_012006010v1 C 0 C 0 s manLeu1.NW_012099899v1 69875 23 + 473220 GAGGCAGGCCTACAGTGGTGGCC i manLeu1.NW_012099899v1 I 62 C 0 s colAng1.NW_012115910v1 6727434 23 - 6934359 GGGTCAGGCTTACAGCGATGGCC i colAng1.NW_012115910v1 C 0 C 0 e chlSab2.chr5 43288683 68 - 75399963 I a score=363717.000000 s hg38.chrUn_KI270749v1 133849 144 + 158759 GGGCTGCAGCAGTGGCCAGGTGGTAGGAGCCTTGTAGGGAGGGCTGGTGCATTGGCAATGGGCCTGGCTTTGCCCTGCGCCTGCCATGGATCTGGCCCTGTACTGCCCTG--CCTTGCCCTGTACCTGCCCTACTGTTACCTGGAT s panTro5.chr22 3791813 111 + 37823149 GGGCTGCAGCAGTGGCCAGGTGGTAGGAGCCTTGTAGGGAGGGCTGGTGCATtggcaatgggcctggctttgccctgc-----------------------------------cttgccctgtacctgccctactgttacctggac i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27212 138 + 66344 AGGCTGCAGCAGTGGCCAGGTGGTAGGAGCCTTGTAGGGAAGGCTGGTGCATtggcaatgggcctggcttttccctgcccctgccatggatttggccctgtactgccctg--ccttgccctgtacctgccc------tacctggac i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2812 144 - 112215 GGGCTGCAGCAGTGGCCAGGTGGTAGGAGCCTTGTAGGGAGGGCTGGTGCATtggcaatgggcctggctttgccctgtgcctgccgtggatctggccctgtactgccctg--ccttgccctgtacctgccctactgttacctggac i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 685510 144 - 115148730 GGGCTGCAGCAGTGGCCACGTGGTAGGAACCTTGTAGGGAGGGCCGGTGCATTGGCAATGGGACTGGCTTTCccctgcccctgctgtggatctggccctgtactgccctg--ccttgccctgtacctgccctactgttacctggac i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24512 144 - 38383 GGGCTGCGGCAGTGGCCGGGTGGTAGAAGCCTTGTAGGGTGGGCTGTTGCATTGGCAATGGGCCTGGCTTTGCCCTGCCACTGCCGTGGACCTGGCCCTGTACTGCCCTG--CCTTGCCCTGGCCCTGCCCTACTGTTACCTGGAC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288751 146 - 75399963 GGCCTACAGCAGTGGCCAGGAGGTAGGAGCCTTGTAGGGAGGGTCAGTGAATtggcaatgggcctgactctgccttgcacctgccatggacctggccctgtactgccccgcccctgcccctggacctgccctaccgttacctggac i chlSab2.chr5 I 68 C 0 s manLeu1.NW_012099899v1 69898 139 + 473220 AGGCTGCAGCAGTCGCCAGGTGGTAGGAGCCTTATAGGGAGAACCAGTGAATtggcaatggacctggctctgccttgcccctgccatggacctggccctgtactgccctg-------ccctggacctgccctaccgttatgttgac i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727457 144 - 6934359 AGGCTGCGGCGGTGGCCAGGTGGTAGAAGCCTTGTAGGGAGGGCTGTTGCATTGGCAATGGGCCTGGCTTTGCCCTGCCACTGCTGTAGACCTGGCCCTGTACTGCCCTG--CCTTGCCCTGGCCATGCCCTACTGTTACCTGGAC i colAng1.NW_012115910v1 C 0 C 0 a score=2548.000000 s hg38.chrUn_KI270749v1 133993 1 + 158759 T s panTro5.chr22 3791924 1 + 37823149 t i panTro5.chr22 C 0 C 0 s nomLeu3.chr7b 685654 1 - 115148730 t i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24656 1 - 38383 T i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288897 1 - 75399963 t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70037 1 + 473220 t i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01048499v1 2569 1 + 2907 t i nasLar1.chrUn_JMHX01048499v1 N 0 C 0 s colAng1.NW_012115910v1 6727601 1 - 6934359 T i colAng1.NW_012115910v1 C 0 C 0 e gorGor5.CYUI01000689v1 2956 0 - 112215 C e panPan2.chrUn_NW_014019468v1 27350 0 + 66344 C a score=3600.000000 s hg38.chrUn_KI270749v1 133994 1 + 158759 G s panTro5.chr22 3791925 1 + 37823149 g i panTro5.chr22 C 0 C 0 s nomLeu3.chr7b 685655 1 - 115148730 g i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24657 1 - 38383 G i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003913010v1 82120 1 - 139415 G i papAnu3.chrUn_NW_003913010v1 N 0 I 276 s chlSab2.chr5 43288898 1 - 75399963 g i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70038 1 + 473220 g i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01048499v1 2570 1 + 2907 g i nasLar1.chrUn_JMHX01048499v1 C 0 I 186 s colAng1.NW_012115910v1 6727602 1 - 6934359 G i colAng1.NW_012115910v1 C 0 C 0 e gorGor5.CYUI01000689v1 2956 0 - 112215 C e panPan2.chrUn_NW_014019468v1 27350 0 + 66344 C a score=197961.000000 s hg38.chrUn_KI270749v1 133995 92 + 158759 TCTCGGCCCTGTCCTGCTCTGGTCCCATCCTGACCCTGTCTTGGCCCTGTGCTACCCTGTCCCTGCCCTGGTCTTGCCCT---GACACTGGCCCT s panTro5.chr22 3791926 92 + 37823149 tctcggccctgtcctgctctggtcccatcctgaccctgtcttggccctgtgctaccctgtccctgccctggtcttgccct---ggcactggccct i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27350 92 + 66344 tctcgtccctgtcctgctctggtcccatcctgactctgtcttagccctgtgctaccctgtccctgccctggtcttgccct---ggcactggccgt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2956 95 - 112215 tctcggccctgtcctgctctggtcccatcctgaccctgtcttggccccgtgctaccctgtccctgccctggtcttgccctggcggcactggccct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 685656 92 - 115148730 tctcggccctgtcctgctctggtcccattctgaccctgtcttggccctgtgctaccctatccctgccctggtcttgccct---ggcactggccat i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24658 54 - 38383 TCTCGGCCCTGCCCTGCTCTGATCCCATCCTGG--------------------------------------TTTTGCCTT---TGCACTGGCCTT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288899 92 - 75399963 tctcaaccctgccctgctctggccccaccctggccctgtcttggccctgtgctaccctgtccctgccctgattctgccct---tgtactggccct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70039 92 + 473220 tctcagccctgccctgctctgaccccatcctggcctggtcttggccctgtgctactctgtccctgccctggtcctgccct---tgtactggccct i manLeu1.NW_012099899v1 C 0 I 59 s colAng1.NW_012115910v1 6727603 53 - 6934359 TCTCGGCCCTGCCCTGCTCTGGT-CCATCCTGG--------------------------------------TCTTGCCTT---TGCACTGGCCCT i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82121 276 - 139415 I e nasLar1.chrUn_JMHX01048499v1 2571 186 + 2907 I a score=-5627.000000 s hg38.chrUn_KI270749v1 134087 1 + 158759 -G s panTro5.chr22 3792018 1 + 37823149 -g i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27442 1 + 66344 -g i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3051 1 - 112215 -g i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 685748 1 - 115148730 -g i nomLeu3.chr7b C 0 I 272 s cerAty1.NW_012006010v1 24712 1 - 38383 T- i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288991 1 - 75399963 t- i chlSab2.chr5 C 0 C 0 s colAng1.NW_012115910v1 6727656 1 - 6934359 T- i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82121 276 - 139415 I e nasLar1.chrUn_JMHX01048499v1 2571 186 + 2907 I e manLeu1.NW_012099899v1 70131 59 + 473220 I a score=12459.000000 s hg38.chrUn_KI270749v1 134088 9 + 158759 CCCTGAACC s panTro5.chr22 3792019 9 + 37823149 ccctgaacc i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27443 9 + 66344 ccctgaacc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3052 8 - 112215 ccc-gaacc i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 24713 9 - 38383 CCCTGAACC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288992 9 - 75399963 ccctggctc i chlSab2.chr5 C 0 I 51 s colAng1.NW_012115910v1 6727657 9 - 6934359 CCCTGAACC i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82121 276 - 139415 I e nasLar1.chrUn_JMHX01048499v1 2571 186 + 2907 I e manLeu1.NW_012099899v1 70131 59 + 473220 I e nomLeu3.chr7b 685749 272 - 115148730 I a score=12983.000000 s hg38.chrUn_KI270749v1 134097 21 + 158759 TGCACTGGCCTGACCTtggct s panTro5.chr22 3792028 21 + 37823149 tgcactggcctgaccttggct i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27452 21 + 66344 tgcactggcctgaccttggct i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3060 21 - 112215 tgcactggcctgaccttggct i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 24722 12 - 38383 TGTGCTGGCCCG--------- i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6727666 12 - 6934359 TGTGTTGGCCCA--------- i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82121 276 - 139415 I e nasLar1.chrUn_JMHX01048499v1 2571 186 + 2907 I e manLeu1.NW_012099899v1 70131 59 + 473220 I e chlSab2.chr5 43289001 51 - 75399963 I e nomLeu3.chr7b 685749 272 - 115148730 I a score=1910.000000 s hg38.chrUn_KI270749v1 134118 2 + 158759 ct s panTro5.chr22 3792049 2 + 37823149 ct i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27473 2 + 66344 ct i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3081 2 - 112215 ct i gorGor5.CYUI01000689v1 C 0 C 0 s manLeu1.NW_012099899v1 70190 2 + 473220 ct i manLeu1.NW_012099899v1 I 59 C 0 e papAnu3.chrUn_NW_003913010v1 82121 276 - 139415 I e nasLar1.chrUn_JMHX01048499v1 2571 186 + 2907 I e colAng1.NW_012115910v1 6727678 0 - 6934359 C e chlSab2.chr5 43289001 51 - 75399963 I e cerAty1.NW_012006010v1 24734 0 - 38383 C e nomLeu3.chr7b 685749 272 - 115148730 I a score=239160.000000 s hg38.chrUn_KI270749v1 134120 110 + 158759 ggccctggctctggccctgCCCCTTGTCCTGACCCTGGTCCTGTCATGGCACTGGCCCTGCCAATGGTCATGGTCCTGCCCCTGTTCTGGCCCTGACCTGGCCTTGGAAA s panTro5.chr22 3792051 110 + 37823149 ggccctggctctggccctgccccttgtcctgaccctggtcatgtcatggcactggccctgccagtggtcatggtcctactcctgttctggccctgacctggccttggaca i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27475 110 + 66344 ggccctggctctggccctgccccttgtcctgaccctggtcctgtcatggcactggccctgccaatggtcatggtcctgctcctattctggccctgacctggccttggaca i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3083 110 - 112215 ggccctggctctggccctgccccttgtcctgaccctggtcctgtcatggcactggccctgccaatggtcatggtcctgctcctgttctggccctgacctggccttggaaa i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 24734 109 - 38383 -GCCTTGGCTCTGGCCCTGCCTCTTGTCCTGACCCTGGTCCTGTCATGGCACTGGCCCTGCTAGTGGTCATGGTCCTGCTCCTGTTCTGGCCTTGACCTGGCCTTGGACG i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289052 109 - 75399963 ggccttggctctggccctgcc-cttgtcctgaccctggtcgtgtcatggccctggccttgccaatggtcatggtcctggtcctgttctggctctgacctgtacttggaca i chlSab2.chr5 I 51 C 0 s manLeu1.NW_012099899v1 70192 110 + 473220 ggccttggctctggctctgcctcttgtcctgaccctggtcctgcaatggcactggccctgccaatgctcatggtcatggtcctgttctggctctgacctggacatggaca i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727678 89 - 6934359 -GCCTTGGCTCTGGCCCTGCCTCTTGTCCTGACCCTGGTCCTGTCATGGCACTGGCCCTGCTAATGGTCATGGTCCTGCTCCTGTTCTGG-------------------- i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82121 276 - 139415 I e nasLar1.chrUn_JMHX01048499v1 2571 186 + 2907 I e nomLeu3.chr7b 685749 272 - 115148730 I a score=25822.000000 s hg38.chrUn_KI270749v1 134230 13 + 158759 TGTCCTGGACCTG s panTro5.chr22 3792161 13 + 37823149 tgtcctggtcctg i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27585 13 + 66344 tatcctggccctg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3193 13 - 112215 tgtcctggccctg i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 24843 13 - 38383 TGTCCTGGCCCAG i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289161 13 - 75399963 tgtcctggcccgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70302 13 + 473220 tgtgctggccctg i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01048499v1 2757 13 + 2907 tttcctggcccag i nasLar1.chrUn_JMHX01048499v1 I 186 C 0 e papAnu3.chrUn_NW_003913010v1 82121 276 - 139415 I e colAng1.NW_012115910v1 6727767 0 - 6934359 C e nomLeu3.chr7b 685749 272 - 115148730 I a score=5782.000000 s hg38.chrUn_KI270749v1 134243 3 + 158759 CTT s panTro5.chr22 3792174 3 + 37823149 ctt i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27598 3 + 66344 ctt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3206 3 - 112215 ctt i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 24856 3 - 38383 ATT i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003913010v1 82397 3 - 139415 ATT i papAnu3.chrUn_NW_003913010v1 I 276 C 0 s chlSab2.chr5 43289174 3 - 75399963 att i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70315 3 + 473220 att i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01048499v1 2770 3 + 2907 att i nasLar1.chrUn_JMHX01048499v1 C 0 N 0 e colAng1.NW_012115910v1 6727767 0 - 6934359 C e nomLeu3.chr7b 685749 272 - 115148730 I a score=5348.000000 s hg38.chrUn_KI270749v1 134246 2 + 158759 TG s panTro5.chr22 3792177 2 + 37823149 tg i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27601 2 + 66344 tg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3209 2 - 112215 tg i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 24859 2 - 38383 TG i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003913010v1 82400 2 - 139415 TG i papAnu3.chrUn_NW_003913010v1 C 0 C 0 s chlSab2.chr5 43289177 2 - 75399963 tg i chlSab2.chr5 C 0 I 5 s manLeu1.NW_012099899v1 70318 2 + 473220 tg i manLeu1.NW_012099899v1 C 0 C 0 e colAng1.NW_012115910v1 6727767 0 - 6934359 C e nomLeu3.chr7b 685749 272 - 115148730 I a score=5644.000000 s hg38.chrUn_KI270749v1 134248 5 + 158759 GCCCA s panTro5.chr22 3792179 5 + 37823149 gccca i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27603 5 + 66344 gccca i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3211 5 - 112215 gccca i gorGor5.CYUI01000689v1 C 0 C 0 s papAnu3.chrUn_NW_003913010v1 82402 5 - 139415 TCCCA i papAnu3.chrUn_NW_003913010v1 C 0 I 411 s manLeu1.NW_012099899v1 70320 5 + 473220 tccca i manLeu1.NW_012099899v1 C 0 C 0 e colAng1.NW_012115910v1 6727767 0 - 6934359 C e chlSab2.chr5 43289179 5 - 75399963 I e cerAty1.NW_012006010v1 24861 0 - 38383 C e nomLeu3.chr7b 685749 272 - 115148730 I a score=-3285.000000 s hg38.chrUn_KI270749v1 134253 18 + 158759 TCCCTGTTCTGGCCCTGA----- s panTro5.chr22 3792184 6 + 37823149 tccctg----------------- i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27608 6 + 66344 tccctg----------------- i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3216 6 - 112215 tccctg----------------- i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 24861 11 - 38383 TTCTGG------------CCCTG i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6727767 6 - 6934359 -TCTTG------------T---- i colAng1.NW_012115910v1 C 0 I 1 e papAnu3.chrUn_NW_003913010v1 82407 411 - 139415 I e manLeu1.NW_012099899v1 70325 0 + 473220 C e chlSab2.chr5 43289179 5 - 75399963 I e nomLeu3.chr7b 685749 272 - 115148730 I a score=0.000000 s hg38.chrUn_KI270749v1 134271 1 + 158759 C e papAnu3.chrUn_NW_003913010v1 82407 411 - 139415 I e gorGor5.CYUI01000689v1 3222 0 - 112215 C e manLeu1.NW_012099899v1 70325 0 + 473220 C e colAng1.NW_012115910v1 6727773 1 - 6934359 I e chlSab2.chr5 43289179 5 - 75399963 I e cerAty1.NW_012006010v1 24872 0 - 38383 C e nomLeu3.chr7b 685749 272 - 115148730 I e panPan2.chrUn_NW_014019468v1 27614 0 + 66344 C e panTro5.chr22 3792190 0 + 37823149 C a score=1714.000000 s hg38.chrUn_KI270749v1 134272 20 + 158759 CTGGCCTTGGAAATGTCCTG s colAng1.NW_012115910v1 6727774 20 - 6934359 CTGGCCTTGGACATGTCCTG i colAng1.NW_012115910v1 I 1 C 0 e papAnu3.chrUn_NW_003913010v1 82407 411 - 139415 I e gorGor5.CYUI01000689v1 3222 0 - 112215 C e manLeu1.NW_012099899v1 70325 0 + 473220 C e chlSab2.chr5 43289179 5 - 75399963 I e cerAty1.NW_012006010v1 24872 0 - 38383 C e nomLeu3.chr7b 685749 272 - 115148730 I e panPan2.chrUn_NW_014019468v1 27614 0 + 66344 C e panTro5.chr22 3792190 0 + 37823149 C a score=127495.000000 s hg38.chrUn_KI270749v1 134292 71 + 158759 GACCTGCTTTGGCCCATCCCTGCCCTGGCCCCACCATGGGCCTGCCTGTTCTGCCCTCTCCTGGCACTGAC s panTro5.chr22 3792190 49 + 37823149 ----------------------ccctggccccaccatgggcctgcctgttctgccctctcctggcactgac i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27614 49 + 66344 ----------------------ccctggccccaccatgggcctgCCTGTTCTGCCCTCTCCTGGCACTGAC i panPan2.chrUn_NW_014019468v1 C 0 M 138 s gorGor5.CYUI01000689v1 3222 49 - 112215 ----------------------ccctggccccaccatgggcctgcctgttctgccctctcctggcactgac i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 24872 65 - 38383 ------CCTTGGCCCATCCCTGCCCTGGCCCCACCATGGCCCTGCCTGTTGTGCCCTCTCCTGGCACTGAC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289184 71 - 75399963 gccctgccttggcccatccttgccctggccccaccatggtgctgcctgttctgccctctcctgacactgac i chlSab2.chr5 I 5 C 0 s manLeu1.NW_012099899v1 70325 71 + 473220 gccctgccttggcccatccctgtcctggccccaccatggtcctgtctgttctgccctctcctggcactaac i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727794 71 - 6934359 GCCCTGCTTTGGCCCATCCCTGCCCTGGCCCCACCATGGCCTTGCCTGTTCTGCCCTCTCCTGGCACTGAC i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82407 411 - 139415 I e nomLeu3.chr7b 685749 272 - 115148730 I a score=269669.000000 s hg38.chrUn_KI270749v1 134363 198 + 158759 CTTGCCCTGTCATGGCCCAGTGGTGCCATTGCCCTGCCTTACCCTGCGCTGGTTGTGCCTTGGCCCCGCTTGGTGCTGGCCGCTccctggacctgccctggacctgccctgACCCTGCCTTGGCTTTTGCCCTGCCCTCACTATGGCCT----------------------------GGCCCTGGCCCTAGCCCTGGTCCTGCCATATCCCTGGCCCTGC------------------CCTTAT s panTro5.chr22 3792239 187 + 37823149 cttgccttgtcatggcccagtgttgccattgccctgccttaccctgcactgattgtgccttggccccgcttggtgctggccactccctggacctgcccag-----------accctgccttgacttttaccctgccctcactatggcct----------------------------ggccctggccctagccctggtcctgccatatccctggccctgc------------------ccttat i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 3271 198 - 112215 cttgccctgtcatggcccagtggtgccattgccctgccttaccctgcgctggttgtgccttggccccgcttggtgctggctgctccctggacctgccctggacctgccctgaccctgccttggcttttgccctgccctcactatggcct----------------------------ggccctggccctagccctggtcctgccatatccctggccctgc------------------ccttat i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 24937 215 - 38383 TTTGCCCTGTCATGGCACAGTGGTGCCATTGACCTGCCTTCCACTGCCCTGGTTGTGCCCTGGCCCTGCCTGGCACTGGCCTCTCCCTGGACCTGCTCTG-----------CCCCTGCCTTGGCCTTTGCCCTGTCCTCACTATGGCCTGGCCCTGGCCTTGTTCTGGCTTAGCCCGGGCCCTGGCCCTAGCCCTGGTTCTACCGTATCCCTGGCCTTGC------------------CCTTAT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289255 223 - 75399963 tttgccctgtcatggctcagtggtgccattg----------ccctgctctggttgtgccctgatcccacttggcactggccgctccctggatctgccctg-----------accctgccttggtttttgccctgctctcacgatggcctggctctggccctgtcctggcccagcccgggccctggccctgaccctggtcctgccatatccctggccctggccctggccctggccctgctcttat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70396 207 + 473220 cttgccctgtcatggcccagtga-gccattgccctgccttaccctgctctggttttgccctggccccacctggcactggccactccctggacctgacctg-----------accctaccttggcttttgccct-ccctcactatggcctggctctggccctgtcctgtcccagcccaggccctggccctgaccctggtcctgccatatccctggccctgg------------------------ i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727865 176 - 6934359 TTTGCCCTGTCATGGCACAGTGGTACCATTGACCTGCCTTACAC-----------TGccctggccctgcctggcactggcctcttcctggacctgctctg-----------gccctgccttggccttcgccctgccctcactatggtct----------------------------ggccctggccctagccctggtcctgccataaccctggccttgc------------------ccttat i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82407 411 - 139415 I e nomLeu3.chr7b 685749 272 - 115148730 I e panPan2.chrUn_NW_014019468v1 27663 138 + 66344 M a score=262094.000000 s hg38.chrUn_KI270749v1 134561 144 + 158759 CCAGGCCTTGCCCCTGCTGCTGCCCTGGCCCTGGCCTGGAACCTGGTCCTGTCAAGGATCTGCCCTGACTCTGCCATGGCCCTGGCCCTGCTCTGCCTTGTTCCTGGCCCTGACCCAGACCCAGACCCATTCCTGGCTCTGCAC s panTro5.chr22 3792426 126 + 37823149 ccaggccctgcccctactgctgccctggcc------tggaacctggccctgtcaaggacctgccctgactctgccatggccctggccctgctctgccttgttcctggccctgaccct------------ttcctggctctgcat i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27801 144 + 66344 CCAGGCCCTGCCCCTGCTGCTGCCATAGCCCTGGCCTGGAACCTGGTCCTGTCAAGGACCTGCCCTGACTCAGCCATGGCACTGGCCCTGCTCTGCCTTGTTCCTGGCCCTGACCCAGACCCAGACCCTTTCCTGGCTCTGCAC i panPan2.chrUn_NW_014019468v1 M 138 C 0 s gorGor5.CYUI01000689v1 3469 141 - 112215 ccaggcctg--ccctgctgctgccctggccctggcctggaacctggtcctgtcaaggacctgccctgactctgccatggc-ctggccctgctctgccttgttcctggccctgacccagacccagaccctttcctggctctgcac i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 25152 138 - 38383 CCAGACCCTGCCCCTGCCTCTGCCCTGGCCCTGGCCTGGAACGTGGTCCTGTCAAAGACTTGCCCTGACTCTGCCATGGCCCTGGTCCTGCTCTGCCTTGGTCCTGGCCCTGACCCA------GACCCTTTCCTGGCTGTACCC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289478 138 - 75399963 ccaggccctgcccctgctgctgccctggccctggcctggaacctggctctgccagggacctaaccggactctgccatggccctggccctgctctgccttggtcctagccctgaccca------gagcatttcctggctctgccc i chlSab2.chr5 C 0 I 6 s manLeu1.NW_012099899v1 70603 127 + 473220 -----------ccctgctgctgcccgggccctggcatggaacctgggcctgccgaggacctgcactgactctgccatggccctacccctgctctgccttggtcctggccctgactca------gagcatttcctgtctctgccc i manLeu1.NW_012099899v1 C 0 I 6 s colAng1.NW_012115910v1 6728041 125 - 6934359 ccgggccctgcccctgcctctgccctggccctggc-------------ctgtcaaggacctgccccgactctgccatggccctggccctgctctgccttggtcctggccatgaccca------gaccctttcctggctgtgccc i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82407 411 - 139415 I e nomLeu3.chr7b 685749 272 - 115148730 I a score=1916.000000 s hg38.chrUn_KI270749v1 134705 2 + 158759 TG s panTro5.chr22 3792552 2 + 37823149 gg i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27945 2 + 66344 TG i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3610 2 - 112215 tg i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 25290 2 - 38383 TG i cerAty1.NW_012006010v1 C 0 I 6 s papAnu3.chrUn_NW_003913010v1 82818 2 - 139415 CA i papAnu3.chrUn_NW_003913010v1 I 411 I 103 s chlSab2.chr5 43289622 2 - 75399963 tg i chlSab2.chr5 I 6 C 0 s manLeu1.NW_012099899v1 70736 2 + 473220 ca i manLeu1.NW_012099899v1 I 6 C 0 s colAng1.NW_012115910v1 6728166 2 - 6934359 tg i colAng1.NW_012115910v1 C 0 I 6 e nomLeu3.chr7b 685749 272 - 115148730 I a score=207902.000000 s hg38.chrUn_KI270749v1 134707 93 + 158759 GCCTTTCCCTGGCCCTGAGCTGGCAGTGGTCTGCCCCTGGTCTTGCCATCACCCTGCCCTGCTGTGCTCTGGATGTGTCATCACCCTGCCCTG s panTro5.chr22 3792554 91 + 37823149 gcctttccctggccctgagctggcagtggtctgcccctggtcttgccatcactctgccctgctgtgctctggatgt--catcaccctgctctg i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 27947 93 + 66344 GCCTTTCCCTGGCCCTGAGTTGGCAGTGGTCTGCCCCTGGTCTTGCCATCACCCTGCCCTGCTGTGCTCTGGATGTGTCATCACCCTGCCCTG i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3612 93 - 112215 gcctttccctggccctgagctggcagtggtctgcccctggtcttgccatcaccctgccctgctgtgctctggatgtgtcatcaccctgccctg i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 25298 93 - 38383 GCCTTTCCCTAGCCCTGAGTTGGCAGTGGTCTGCCCCTGGTCTTGCCACCACCGTACCCTGCCATGCACTGGATGTGTCATCAGCCTGCCCTG i cerAty1.NW_012006010v1 I 6 C 0 s chlSab2.chr5 43289624 92 - 75399963 gcctttccctgg-cctgagctggcagtggtctgcccctggtcttggcaccaccctgccctgccatgcgctggctgtgtcatcaccctgccctg i chlSab2.chr5 C 0 I 11 s manLeu1.NW_012099899v1 70738 92 + 473220 gccttcacgtgg-cctgaactggcagtggtctgcccctggtcttggcaccaccctgccctgccgtgctctggctgtgtcatcaccctgccctg i manLeu1.NW_012099899v1 C 0 I 11 s colAng1.NW_012115910v1 6728174 92 - 6934359 ggctttccctggccctgagttggcagtggtctgcccc-ggtcttgccaccaccctgccctgccgtgctctggatgtgtcatcagcctgccctg i colAng1.NW_012115910v1 I 6 C 0 e papAnu3.chrUn_NW_003913010v1 82820 103 - 139415 I e nomLeu3.chr7b 685749 272 - 115148730 I a score=-5322.000000 s hg38.chrUn_KI270749v1 134800 1 + 158759 -C s panTro5.chr22 3792645 1 + 37823149 -g i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28040 1 + 66344 -G i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3705 1 - 112215 -g i gorGor5.CYUI01000689v1 C 0 C 0 s papAnu3.chrUn_NW_003913010v1 82923 1 - 139415 T- i papAnu3.chrUn_NW_003913010v1 I 103 I 4072 s chlSab2.chr5 43289727 1 - 75399963 t- i chlSab2.chr5 I 11 C 0 s manLeu1.NW_012099899v1 70841 1 + 473220 t- i manLeu1.NW_012099899v1 I 11 C 0 e colAng1.NW_012115910v1 6728266 0 - 6934359 C e cerAty1.NW_012006010v1 25391 0 - 38383 C e nomLeu3.chr7b 685749 272 - 115148730 I a score=115389.000000 s hg38.chrUn_KI270749v1 134801 68 + 158759 CCCTACTCTGCCTTTGACCCTGCCCTGGCCTTACCTTGGCCCTCACCCTAGTCTTCGCTAGGCCCAGC s panTro5.chr22 3792646 68 + 37823149 ccctactctgcctttgaccctgccctggccttaccttggccctcaccctagtctttgctaggccctgc i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28041 68 + 66344 CCCTACTCTGCCTTTGACCCTGTCCTGGCCTTACCTTGGCCCTCACCCTAGTCTTCATTAGGCCCTGC i panPan2.chrUn_NW_014019468v1 C 0 I 18 s gorGor5.CYUI01000689v1 3706 68 - 112215 ccctactctgcctttgaccctgccctggccttaccttggccctcaccctagtcttcgctaggcccagc i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 25391 41 - 38383 ---------------------------GCCCTACCTTGTCCCTCACCCTAGTCTTCGCTAGGCCCTGC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289728 68 - 75399963 ccctactctggctttgaccctgccctagccctaccttggccctcaccctagccttggctaggcactgc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70842 68 + 473220 ccctgctctggctttcactctgccctaaccctactttggccctcaccctagccttggttaggccctgc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728266 41 - 6934359 ---------------------------gccctaccttgtccctcaccctagtcttcgctaggacctgc i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e nomLeu3.chr7b 685749 272 - 115148730 I a score=16666.000000 s hg38.chrUn_KI270749v1 134869 28 + 158759 ACAGACCTGGCTCTGACCCTGGCCGAGC- s panTro5.chr22 3792714 18 + 37823149 -----tctggagctggccct-----agc- i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 3774 23 - 112215 acagacctggctctgaccct-----ggc- i gorGor5.CYUI01000689v1 C 0 I 1 s cerAty1.NW_012006010v1 25432 19 - 38383 -----TCTGGAGCTGGCCCT-----AGCC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289796 19 - 75399963 -----tctggacctgcccct-----agcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70910 19 + 473220 -----tgtggacctggccct-----agct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728307 19 - 6934359 -----tctggacctggccct-----agcc i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e nomLeu3.chr7b 685749 272 - 115148730 I e panPan2.chrUn_NW_014019468v1 28109 18 + 66344 I a score=168903.000000 s hg38.chrUn_KI270749v1 134897 100 + 158759 ACAGACCTGGCTCTGACCCTGGCCCTGGTCTTTGTCCT------GCCATAGCCTTGG-----------CCCTGAAGTGGACTTGGAGGTGTCCTGGCCCCGGTGTAACATGGCTCTT s panTro5.chr22 3792732 100 + 37823149 acagacctggccctgaccctggccctggtctttgtcct------gccatagccctgg-----------ccctgaagtggacttggaggtgtcctggccctggcgtaacatggctctg i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28127 100 + 66344 ACAGACCTGGCCCTGATCCTGGCTCTGGTCTTTGTCCT------GCCATAGCCCTGG-----------CCCTGAAGTGGACTTGGAGGTGTCCTGGCCCTGGCATGACATGGCTCTG i panPan2.chrUn_NW_014019468v1 I 18 C 0 s gorGor5.CYUI01000689v1 3798 76 - 112215 ------------------------ctggtctttgtcct------gccatagccttgg-----------ccctgaagtggacttggaggtgtcctggccccggtgtaacatggctctg i gorGor5.CYUI01000689v1 I 1 C 0 s cerAty1.NW_012006010v1 25451 98 - 38383 -CAGACCTGGCCCTGACCCTGGCCCTGGCCTTTGTCCT-------TCATAGCCCTGG-----------CCCTGAAGTGGACTTGGAGGTGTCCTGGCCCTGGAGTGACCTGGCTCTG i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289815 110 - 75399963 -cagacctggccctggctct------ggcttttgtcctgccactgccctggccctggccctgccctcaccctgaactagacttggaggtgtcctggccctgaggtgacctggccctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70929 98 + 473220 -cagacctgaccctggctct-------ccctttgtcctaccaaagccctgtccctgg-----------tcctgaactagacttggaggtgtcctggccctgaagtgaccctggcctg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728326 98 - 6934359 -cagacctggccctgaccctggccctggcctTTGTCCT-------TCATAGCCCTGG-----------CCATGAAGTGGACTTGGAGGTGTCCTGGCCCTGGAGTGACCTGGCTCTG i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e nomLeu3.chr7b 685749 272 - 115148730 I a score=32251.000000 s hg38.chrUn_KI270749v1 134997 12 + 158759 CTTTGGCCTGTC s panTro5.chr22 3792832 12 + 37823149 cattggcctgtc i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28227 12 + 66344 CATTGGCCTGTC i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3874 12 - 112215 cattggtctgtc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686021 12 - 115148730 CCTTGGCCTGTC i nomLeu3.chr7b I 272 C 0 s cerAty1.NW_012006010v1 25549 12 - 38383 CCTTGGCCTGTC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289925 12 - 75399963 cctaggcctgtc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71027 12 + 473220 cctaagcctgtc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728424 12 - 6934359 ccttggcctgtc i colAng1.NW_012115910v1 C 0 I 14 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=-5615.000000 s hg38.chrUn_KI270749v1 135009 3 + 158759 TCA------ s panTro5.chr22 3792844 3 + 37823149 cct------ i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28239 3 + 66344 CCT------ i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3886 3 - 112215 tct------ i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686033 3 - 115148730 CCT------ i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25561 3 - 38383 -CT-----T i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289937 8 - 75399963 -cctgcctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71039 3 + 473220 -cc-----t i manLeu1.NW_012099899v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e colAng1.NW_012115910v1 6728436 14 - 6934359 I a score=549789.000000 s hg38.chrUn_KI270749v1 135012 200 + 158759 GCCCTGCCCCTACCATCGCCTTGCCCTGCTCTGCCCTGCCCCAGTACTGACCCGGCCACGCTATTTCCCTGCCCTACCCTGCCTTGGCTGTGCCCTGGCTCGGTTCTGGCCCTGGCCCCGGCCCTGCCCTGGACATGCTCTGACACTGCCTCAGCCTTGGCACTAGCCTGGCTCTTTCTTGGCATCAGCCCTGCTCTCTC s panTro5.chr22 3792847 200 + 37823149 gccctgcccctaccatcgccttgccctgctctgccctgtcccagtactgacccggccatgctatttccctgccctaccctgccttggctgtgccctggctcagttctggccctggccccggccctgccctggacatgctctgacactgcctcagccttggcactagcctggctctttcttggcatcagccttgctctctc i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28242 200 + 66344 GCCCTGCCACTACCATTGCCTTTCCCTGCTCTGCCCTGTCCCAGTACTGACCCAGCCATGCTATTTCCCTGCCATACCCTGCCTTGGCTGTGCCCTGGCTCGGTTCTGGCCCTGGCCCCGGCCCTGCCCTGGACATGCTCTGACACTGCCTCAGCCTTGGCACTAGCCTGGCTCTTTCTTGGCATCAGCCCTGCTCTCTC i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3889 200 - 112215 gccctgcccctaccatcgccttgccctgctctgccctgtcccagtactgacccggccacgctatttccctgccctaccctgccttggctgtgccctggctcggttctggccctggccccggccctgccctggacatgctctgacactgcctcagccttggcactagcctggctctttcttggcatcagccctgctctctc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686036 200 - 115148730 CCCCTGCCCCTACCATCACCTTGCCCTTCTCTGCCCTGTCCCAGTACTGACCTGGCCGTGCCATTTCCCTGCCCTACCCTGCCTTGGCTGTGCCCTGGCTCGGTTCTGGCCCTGGCCCCGGCCCTGCCCTGGACATGCTCTGACACTGCCTCAGCCTTGGCACTAGCCTTGCTCTTTCTTGGCATCAGTGCTGCTCTCTC i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25564 194 - 38383 GCCCTGCCCCTACCATCACCTTGCCCTGTTGTGCCCTGTCCTAGTACTGACCCGGCTGTGGCATTGCCCTGCCCTACCCTGCCTTGGCTGTGCCCTGGCTCGATTCCGGCCCTGGCCCC------GCCCTGTGCATGCCATGACACTACCTCAGCCTCGGCACTAGGCTGGTCCTTTCCTGGCATCAGCCGTGCTCTTTC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289945 194 - 75399963 gccccgcccccgtcatcgccttgccctgttctgccctgtcctggcactgacctggacataccattgccctgccctaccctgccttggccatgccctgactcggttctggccctggcccc------gccctggacatgccctgacactgcctcagccttggcactagcctggctcggccttggcattggccctgccctctc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71042 194 + 473220 gccctgcccctgccatcgccttgccctgttctgccttgtcccagcacggacctggccatgccattgtcctgccctaccctgccttggccatgccctggcttggttctggccctggcccc------accctggacataccctgatactgcctcagcctttgcactattgtggctctgccttggcattggccctgctctctc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728450 194 - 6934359 gccctgCCCCTCCCATCACCTTGCCGTGTTCTGCCCTGTCCTAGTACTGACCCGGCTATGGCATTGCCCTGCCCTACCCTTCCTTGGCTGTGCCCTGGCTCGATTCTGGCCCTGGCCCC------GCCCTGTACATGCCATGACACTACCTGAGACTTGGCACTAGCATGGCTGTTTCCTGGCATCAGCCCTGCTCTCAC i colAng1.NW_012115910v1 I 14 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=8814.000000 s hg38.chrUn_KI270749v1 135212 3 + 158759 TGT s panTro5.chr22 3793047 3 + 37823149 tgt i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28442 3 + 66344 TGT i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 4089 3 - 112215 tgt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686236 3 - 115148730 TGT i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25758 3 - 38383 TAT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290139 3 - 75399963 tgt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71236 3 + 473220 tgt i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01104421v1 981 3 - 1182 TAC i nasLar1.chrUn_JMHX01104421v1 N 0 I 29 s colAng1.NW_012115910v1 6728644 3 - 6934359 TAT i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=109353.000000 s hg38.chrUn_KI270749v1 135215 43 + 158759 GGACTGGCTCTTGTCCTTTCCTGCCCTGGCCATACCATGCCCT s panTro5.chr22 3793050 43 + 37823149 ggaccggctcttgtcctgtcctgcactggccataccatgccct i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28445 43 + 66344 GGACTGGCTCTTGTCCTGTCCTGCACTGGACATACCATGCCCT i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 4092 43 - 112215 ggaccggctcttgtcctgtcctgcactggccataccatgcctg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686239 43 - 115148730 GGACCAGCTCTTGTCCTGTCCTGCACTGGCCATACCATGccct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25761 43 - 38383 GGACCGCCTTTTGTCGTGTCCTGCGCTGGCCATTCCATGCCCT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290142 43 - 75399963 ggactgggtttggttgtgtcctgcactggccataccatgcctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71239 43 + 473220 ggtctggctctagtcctgtcctgtactggccatactatgccct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728647 40 - 6934359 GGACCGCCTCTTG---TGTCCTGCGCTGGCCATTCCATGccct i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e nasLar1.chrUn_JMHX01104421v1 984 29 - 1182 I a score=3876.000000 s hg38.chrUn_KI270749v1 135258 8 + 158759 GCCCTG--CC s panTro5.chr22 3793093 8 + 37823149 gccctg--cc i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28488 8 + 66344 GCCCTG--CC i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 4135 6 - 112215 --cctg--cc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686282 8 - 115148730 gccctg--cc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25804 6 - 38383 GCCCTG---- i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290185 6 - 75399963 gccctg---- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71282 6 + 473220 gccctg---- i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01104421v1 1013 7 - 1182 GCTCTCG--- i nasLar1.chrUn_JMHX01104421v1 I 29 I 113 s colAng1.NW_012115910v1 6728687 8 - 6934359 gccctgcc-- i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=252191.000000 s hg38.chrUn_KI270749v1 135266 104 + 158759 CTgccctgactcagccctgactcagcc-----------TTGGCCTTGGCATTGCCCCTGGTCCTGCCATATTTCTTGCCCTGTCCCTACCCTAGCCTTGGCCCTGACCCTTACCT s panTro5.chr22 3793101 115 + 37823149 ctgccctgactcagccctggctcagccctggcccagccttggccttggcattgcccctgatcctgccatatttcttgccctgtccctaccctggccttggccctgacccttacct i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28496 114 + 66344 CTGCCCTGACTCAGCCCTGGCTCAGCCCTCG-CCAGCCTTGGCCTTGGCATTGCCCCTAGTCCTGCCATATTTCTTGCCCTGTCAGTACGCTGGCCTTGGCCCTGACCCTTACCT i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 4141 104 - 112215 ctgccctgactcagccctgactcagcc-----------ttggccttggcattgcccctggtcctgccatatttcttgccctgtccctaccctagccttggccctgacccttacct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686290 115 - 115148730 ctaccctgactcagccctggctcagccctggcccagctctggccttggcattgcccctggtcctgccatatttcttgccttgtccctaccctggccttggccctgacccttacct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25810 95 - 38383 ---------CCCTGCCCTGACTCAGCC-----------CTGGCCTTGGCATTGCCCTTGGTCCTGCCGTATTTCTTGCCCTGTCCCTATCCTGGCCTTGGCCCTGACCCTTACCT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290191 90 - 75399963 --------actcagtcatggctcagcc-----------ctggacttggcgttgcccttggtcctgccatatttccggccctgtccctaccctggtcctggc------tgtttccc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71288 85 + 473220 --------actcagccatggctcagcc-----------ctggctttggcgttgccgctggtcctgccatatttctggccctgtccctaccttggccttgga-----------cct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728695 99 - 6934359 -----ctgactcagccctggcccagcc-----------ctggccttggcattgcccctggtcctgccatatttcttgccctgtccctaccctggccttggccctgacccttacct i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e nasLar1.chrUn_JMHX01104421v1 1020 113 - 1182 I a score=12173.000000 s hg38.chrUn_KI270749v1 135370 5 + 158759 TGCTG s panTro5.chr22 3793216 5 + 37823149 tgctc i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28610 5 + 66344 TGCTC i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 4245 5 - 112215 tgctc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686405 5 - 115148730 tgctc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25905 5 - 38383 TGCTC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290281 5 - 75399963 tgctc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71373 5 + 473220 ggccc i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01104421v1 1133 5 - 1182 TACAG i nasLar1.chrUn_JMHX01104421v1 I 113 N 0 s colAng1.NW_012115910v1 6728794 5 - 6934359 tgctc i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=172147.000000 s hg38.chrUn_KI270749v1 135375 60 + 158759 TGGCCCTGCCCTTGCCCTAACGCAGCCCCTGGTCCTGTCATGGCCCTGCCCTGGACCTGT s panTro5.chr22 3793221 60 + 37823149 tggccctgcccttgcccttacgcagcccctggccctgtcatggccctgccctggacctgt i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28615 60 + 66344 TGGCCCTGCCCTTGCCCTAACACAGCCcctggccctgtcatggccctgccctggacctgt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 4250 59 - 112215 tggccctgcccttgccctaatgcagcccctgg-cctgtcatggccctgccctggacctgt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686410 60 - 115148730 tggccctgcccttgctctaatgcagccgatggccctgtcatggccctgccctggacctgt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25910 60 - 38383 TGGCCCTGCCCTTGCCCTTACGCAGCccctggccctgtcatggacctgccctggacctgt i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290286 60 - 75399963 tgtccctgccctggccctaacgcagcccctggtcctgtcatggccctgacctggacctgt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71378 60 + 473220 ttaccctgccctggccctaacgaagcccttggccctgtcatggccctgccctggccttct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728799 60 - 6934359 tggccctgcccttgcccttacacagctcctggccctgtcatggacctgccctggacctgt i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=35838.000000 s hg38.chrUn_KI270749v1 135435 9 + 158759 CCTGGCCCT s panTro5.chr22 3793281 9 + 37823149 cctggccct i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 28675 9 + 66344 cctggccct i panPan2.chrUn_NW_014019468v1 C 0 M 531 s gorGor5.CYUI01000689v1 4309 9 - 112215 cctggccct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686470 9 - 115148730 cctgtccct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25970 9 - 38383 cctggccct i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290346 9 - 75399963 cctggccct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71438 9 + 473220 cctggccct i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01000912v1 660 9 - 1425 ACTGGCCCT i nasLar1.chrUn_JMHX01000912v1 N 0 C 0 s colAng1.NW_012115910v1 6728859 9 - 6934359 cctggccct i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=16179.000000 s hg38.chrUn_KI270749v1 135444 7 + 158759 GGTCCTT s panTro5.chr22 3793290 7 + 37823149 ggccctt i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 4318 7 - 112215 ggccctt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686479 7 - 115148730 ggccatt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25979 7 - 38383 ggccctg i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290355 7 - 75399963 ggccctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71447 7 + 473220 ggccctt i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01000912v1 669 6 - 1425 -GCACTG i nasLar1.chrUn_JMHX01000912v1 C 0 N 0 s colAng1.NW_012115910v1 6728868 7 - 6934359 ggccctt i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=549733.000000 s hg38.chrUn_KI270749v1 135451 265 + 158759 CCCTGCTTGAGACCTTGCCCTGG-TTCTCCCCTGGC-----------CCTGACCCTGAAATGCCTGGCCCTACCCTGGCCTTGCACTGCTCTGGCCCTTGCCCTGACTCTGGTCCTGTCACTGACCTAGCCCCAGCCCTGTTGCTGGTCTTACCATGGCCCAGACCCTGCCTTGGCCCTGCCCTGACACTGTCCTGGACCCTGGCTGTGCCAAGAACCTGTACTGTCCTTGCCCTTGTTGTGCTCCTGCCCCGAACCTGGTCCTTCCCAggccgtgg s panTro5.chr22 3793297 265 + 37823149 ccctgcttgagaccttgccctgg-ttctcccctggc-----------cctgaccctgaaatgcctggccctaccctggccttgcactgctctggcccttgccctgactctggtcctgtcactggcctagccccagccctgttgctggtcttaccatggcccagaccctgccttggccttgccctgacactgtcctggaccctggctgtgccaagatcctgcactgtccttgcccttgttttgctcctgccccaaacctggtcctgccctggccctgg i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 4325 264 - 112215 ccctgcttgagaccttgccctgg-ttct-ccctggc-----------cctgaccctgaaatgcctggccctagcctggccttgcactgctctggcccttgccctgactctggtcctgtcactgacctagccccagccctgttgctggtcttaccatagcccagaccctgccttggccctgccctgacactgtcctggaccctggctgtgccaagaacctgcactgtccttgcccttgttttgctcctgccccaaacctggtcctgcccaggccgttt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686486 222 - 115148730 ccctgcttgagaccttgccctgg-ttctcccctggc-----------c------------------------------------------ctggcccttgccctgactctggtcctgtcactggcctagccccagccctgttgctggtcttaccacggcccagacactgccttggccctgccctgacactctcctggtccctggctatgccaagaacctgcactgtccttgcccttgttttgcccctgccccgaa-ctggtcctgcccaggtcatgg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25986 265 - 38383 ccctgcTTCAGACCTTGCCCTGG-TTCTCCCCTGGC-----------CCTGATGGTGAAATGCCTGGCCCTACCCTGGCCTTGCACTGCCCTGGCCCTTGCCCTGACTCTGGTCCTGTCCCTGGAAAAGCCCCAGCCCCGTTGCTCGTCTTACCATGGCCCAGACCCTGCCTTGGCCCTGCCCTGACACTGTCCTGGACCCTTGCTGTGCCAAGAACCTGCACTGTTGTTGCCCTTGTTTTGCTCCTGTCCCCAACCTCGTCCTGCCCAGGCCATGG i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290362 271 - 75399963 ccctgcttgagaccttaccctgg-ttctgccctggccctgac-----cctgacactgaaatgcctggccctaccctcaccttgcactgctctgatccttgccctgactctggccctatcactgtcctagccccagccctgtcactggtcttaccacagcccagagcctgccttggccctgccctgatcctgtcctggtctctggctgtgccaagaaactgcactgtccttgcccttgtttttctcctgccctgaacctggtcctacccaggccatgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71454 276 + 473220 ccctgcttgagatcttaccctgg-ttctgccctggccctgaccctgtcctgacactgaaatgcctggccctatcctggccttgcactgctctggcccttgccctgactctggccctgtcactgtcctagccccagcccggtcacaagtcttaccatggctcagaccctgccttggccctgccctgaccctgtactagaccctggctgtgtcaagaacttgcactgtcattgcccttgttttgctcctaccctgaacctggtcctgcccaagccatgg i manLeu1.NW_012099899v1 C 0 I 312 s colAng1.NW_012115910v1 6728875 266 - 6934359 ccctgcttcagaccttcccctggtttcacccctggc-----------cctgcccgtgaaatgcctggccctaccctggccttgcactgctctggcccttgccctgactctggtcccgtcactggaaaagccccagccctgttgctcgtcttaccatgggccggaccctgccttgtccctgccctgacactgtcctggaccctggctgtgccaagaacctgcactgttgttgcccttgttttgctcctgtcccgaacctggtcctgcccaggccgtgg i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=3414.000000 s hg38.chrUn_KI270749v1 135716 2 + 158759 cc s panTro5.chr22 3793562 2 + 37823149 cc i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 4589 2 - 112215 ct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686708 2 - 115148730 cc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26251 2 - 38383 CC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290633 2 - 75399963 cc i chlSab2.chr5 C 0 I 3383 s colAng1.NW_012115910v1 6729141 2 - 6934359 cc i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=473607.000000 s hg38.chrUn_KI270749v1 135718 433 + 158759 gtgg-----------------ccctggc-----cctggccctgcccaggtcttggcactggcctggccctgccctgccctggccctATGCTTTCCTGGCCCTGCCTTG-------------------------------------------------------------------GCCCTAGCCTGGCTTTGACCCTGCCCTGGCCCTACCTTGGCCTTCACCCTAGCCTTACCTGGGCACTGTGTTTGACCTGGCTATAGCACAGACCTGGTTGTGG------CCCTGGCCCTGCCGTGGCCCTGTCCCAGACCCTAGCCCTGCCAGGTACCTGTCCTGGCCCAGCTCTGGGCCTGGCTTTGTCCCTGGTTCTTAGATGACCCTGGCCCTGCCCCTGCCCTTGCCCTTGCCATGGCACTGGCCTTGGACATGTCCGTGGTCCTAACCCTGGCCCTGCCCTGGAGCTGCCACTGTCTT-----------------GGCCCTGCCC------TGGCTCTGGCCCTGCCCCAGCCCTGGCCCTGCCCCGGCCC s panTro5.chr22 3793564 527 + 37823149 ctggtcctg------------ccctggctgttccctggccctgcccaggtcttggcactggcctggccctgtcctgccttggccctatgctttcctggccctgccttgctggccctggtcctgccttggccctatgctttcctgtccctgccttgccagccctggtcctgccttggccctagcctggctttgaccctgccctggccctaccttggccttcaccctagccttacctgggcactgtgttggacctggccatagcacagacctggttgtgg------ccctggccctgccatggccctgtcccagaccctagccctgccaggtacctgtcctggccctgctcagggcctggctttgtccctggttcttagatgaccctggccctgcccctgcccttgtccttgccctggcactggccttggacatgtccgtggtcctaaccctggccctgccctggagctgccactgtcttcgccctgccctggctctggccctgccc------tggccctggccctgccccggccctggccctgccccggccc i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 4591 449 - 112215 atgg-----------------ccctggc-----cctggccctgcccaggtcttggcactggcctggccctgccctgccctggccctatgctttcctggccctgccttg------------------------------------------------ccgccctggccctgccttggccctagcctggctttgaccctgccctggccctaccttggccttcaccctagccttacctgggcactgtgttggacctggccatagcacagacctggttgtgg------ccctggccctgccgtggctctggcccagaccctagccctgccaggtacctgtcctggcccagctctgggcctggctttgtccctaattcttagatgaccctggccctgcccctgcccttgcccttgccctggcactggccttggacatgtctgtggtcctaaccctggccctgccctggagctgccactgtctt-----------------ggccctgccc------tggctctggccctgcccc-gccctgg-cctgccccgg-cc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 686710 447 - 115148730 atggccctggccctggcacttccctggctgttccctgaccctgcccaggtcttggcactggcctggccctgccctgtcttggccctaggttttcctggccatgccttg-----------------------------------------------cctgccacggccctgccttggccctagcctggctttgaccctgccctggccctatcttggccttcaccctagcctcacctgggcactgtgttggacctggccatagcacagacctggttgtggccctgaccctggccctgccatggccctgtcccagactgtagccctgccaggtacctgtcctggccctgctctgggcctggccttgtccctggttcttaaatgaccctggccctgcccctgcccttgcccttgccctggcactggccttggacatgtccgtggccctaaccctggccctgccctggagctgccactgcctt-----------------ggccctgccc------cggccc---------------------------------- i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26253 446 - 38383 ATGGCCCTGTCCCTG------CCCTGGCTATTCCCTCGCCCTGCTCAGGTCTTGGCACTCTCCTGGCCCTGCCCTGCCTTCGCCCTGTGCTTTCCTGGCCCTGCCTTG-----------------------------------------------CCTGCCCTGGTCCTGCCTTGGCCCTACTCTAGCTTTGATCCTTCCCTGGCCCTACCTTGGCCTTCACCCTAGCCTTGTCTGGGCACTGTGCTGGACCTGGCCATAGCACAGACCTGGTTGTGG------CCCTGGCCCTGCCATGGCCCTGTCCCAGACCCTAGCCCTGCCAGGTACCTGTCCTGGCCCTGCTCTGGGCCTGGCTTTGTCCTTGGTTCTTAGATGACCCTGGCCCTGCCCCTGCCCTTGCCC------TGGCACTGACCTTGGACATGTCCGTGGTCCTAACCCTGGCCCTGCCCTGGAGCTGTCACTGTctt-----------------ggccctgccttggccctggccctggccctgccA----------------------- i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6729143 401 - 6934359 atggccctgtccctg------ccctggctgttccctggccttgctcaggtcttgaccctggcctggccctgtcttgccttggccctatgctttcctggccctgccttg-----------------------------------------------cctg---------------------------------------cccttgccctgccttggccttcaccctagtcttgcctggacactgtgctggacctggtcatagcacagacctggttgtgg------ccctggccctgccatggccctgtcccagaccctagccctgccaggtacctgtcctgaccctgctctgggcctgactttgtccctggttcttagatgaccctggtcctgcccctgcccttgccc------tggcactggccttggacatctctgtggtcctaaccccggctctgccttggagctgtcagtgtctt-----------------gaccctgcct------tggccctggccctgcca----------------------- i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=1314.000000 s hg38.chrUn_KI270749v1 136151 1 + 158759 C s panTro5.chr22 3794091 1 + 37823149 c i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 5040 1 - 112215 c i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr18 72629154 1 - 94050890 T i ponAbe2.chr18 N 0 N 0 s nomLeu3.chr7b 687157 1 - 115148730 c i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26699 1 - 38383 C i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6729544 1 - 6934359 c i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=538504.000000 s hg38.chrUn_KI270749v1 136152 513 + 158759 AGCCATAGACCTGCCCTGGTTGGTCGTTCCCTACCTTAACCCTGTGCTA-CCCTGGGCCTGCTCCACCCTGCCCTGGCCCTGCCCTCCCTTTGGGCCTGCTCTGACCCCGCCTTGGCCCTCACACTGGCCCTAGCACAGACCTGGTCCTATCTGTGGCCTTGCTCTGGCATTGACCCCTGCTCCTGACCCTGGTCCTGCCATGGCCCTGGCCCTGCCAATGACCCTG--------------------------------GCCCTGAACTGGCCCTGCCCTGACC-TGGCCCTGAAGTGGATTTGCAGGTGTCTTGTCCATGATTTAA---------------------------CCTGGTCTTACCATGGCCCTGTCCCTCCCCTGGCTCTGTCCTGGTCTTGTGCTGACCCTGACCCAGACCTTGGCCCTGCCCCAGCCTTGTCCTTGACCTGGCCATGCCCCTGCCTCTGCCCTGGACCGGCACTGGCACTGGCATGGACCCTGGCCCTGGCCCTTCACTACTTAAGGCCATACCCTGGCCCAGCCCTGGTCCTGACCCTGTCCTGGCCCTA s panTro5.chr22 3794092 546 + 37823149 agccatagacctgccctggttggtcgtgccctaccttaaccctgtgcta-ccctgggcctgctccaccctgccctgtccctgccctccctttggccctgccctgacccctccttggccctcacactggccctagcacagacctggtcctatctgtggcgttggcctggcattgacccctgctcctgaccctggtcctgccatggccctggccctgccaatgaccctgacagccctggccctggccctgtcttggccctggccctgaactgaccctgccctgaccctggccctgaagtggatttgcaggtgtcttgtccctgatttaa---------------------------cctggccctaccatggccctgtccctctcctggctctgtcctggtcttgtgctgaccctgacccagacctcggccctgccccagccttgtcgttgacctggtcatggccctgcctctgccctggaccggcgctggcactggcatggaccctggtcctggcccttcactacttaaggccataccctggccaagccctggtcctgaccctgtcctggcccta i panTro5.chr22 C 0 I 81 s gorGor5.CYUI01000689v1 5041 545 - 112215 agccatagacctgccctggttggtcgtgccctaccttaaccctgtgcta-ccctgggcctgctccaccctgccctggccctgccctccctttggccctgccctgaccccaccttggccctcacactggccctagcacagacctggtcctatctgtggccttggcctggcattgacccctgctcctgaccctggtcctgccatgtccctggccctgccaatgaccctggcagcccttaccctggccctgtcttggccctggccctgaactggccctgccctgaccctggccctgaagtggatttgcaggtgtcttgtccatggtttaa---------------------------cctggtcttaccatggccctgtccctcccctggctctgtcctggtcttgtgctgaccctgacccagaccttggccctgccccagccttgtcctagacctggccatggccctg-ctctgccctggaccggcgctggcactggcatggaccctggccctggccctttgctacttaaggccataccctggcccagccctggtcctgaccctgtcctggcccta i gorGor5.CYUI01000689v1 C 0 I 75 s nomLeu3.chr7b 687158 408 - 115148730 agcaatagacctgccctggttggtcatgccctgacttaaccctgtgctacccccagacctgctccaccctatcctggccctgccctccctttggccctgtcctgaccctgccttggccctcacactggccctagcacagacctggtcctatctgtgtccttggcccagcattgactcctgttcctgaccctgatcctgccatggccctgtccct-------cccctg--------------------------------gctctgtcctggtcttctgctgaccctgacccaga---------------------------------------------------------------------------------------ccttggccctgccccagccttgt----------------------------------------cctagacctggccatggccctgcctctgccctggacaggtgctggcactggcatggaccctggccctggcccttcactacttaaggccataccctggcccagccctgatcctgaccctgtcctggcccta i nomLeu3.chr7b C 0 I 75 s cerAty1.NW_012006010v1 26700 573 - 38383 AGCCAAAGACCTGCCCTGGTTGGTCATGCCCTGCCTTAACCCAGTGCTA-CCGTGGGCCTGCTCCACCCTGCCCTGGCTCTGCCCTGCCTTTGGCTCTGCCCTGACCCTGCCTTGGCCCTCACACTGGCCCTAGTGCAAACCTTGTCCTTGCTCTGGCCTTGGCCCGGCATTGACCACTGCTCCTGACCCTGGTCGTGCCATGGCCCTGACCCTGCCAATGATCCTGACAGTCGtggccctggccctgtcttggccctgtcctggccctggccctggccttaccctggccctgAAGTGGATTTGAAGGTATCCTGTCCCTGGTTTAATCTTGCTCTGCCTTCGCCCGTCCCTCTCCTGGCCCTACCATGGCCCTGCCCCTTCCCTGGCTCTGCCCTGGTCTTGTTCTTACCCTGACCGAGACCTTGGCCCTGCCCCAGCCTTGTCCCAGACCTGGCTATGGCCCTGCCCCTGCCCTGGGCCGGCGCTGGCACTGGCATGGACCCTGGACCTGGCTGTTGGCTACTTAAGGCCATACCCTGGCCCAGCCCTCCTCGTGACCCTGTCCTGGCCCTA i cerAty1.NW_012006010v1 C 0 I 78 s colAng1.NW_012115910v1 6729545 563 - 6934359 agccacagacctgccctggttggtcatgccctgccttaacccagtgcta-ccctgggcctgctccaccctgccctggctccgccctgcctttggccctgccctgaccccgccttggccctcacactggccctagtgcaaacctggtccttgctctggccttggcccggcattgaccactactcttgaccctggtcgtgccatggccctggccctgccaatgatcctgacagtcctggccctggccctgtcttggccctgtcctgaccctgggcctgccctgaccctggccctgaAGTGTATTTGAAGGTATCTTGTCCCTGATTTAATCTGGTTCTACCTTGCCCCGTCCCTCTCCTGCCCCTACCATGGCCGTGCCCCTTCCCTG----------GGTCTTTTGCTTACCCTGACTGAGACCTTGGGCCTGCCCCAGCCTTGTCCTAGAcctggccatggccctgcccctgccctggattggccctggcactggcatggaccctggacctggctcttggctacttaaggccataccctggcccagccctcctcctgaccctgtcctggcccta i colAng1.NW_012115910v1 C 0 I 34 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=8907.000000 s hg38.chrUn_KI270749v1 136665 17 + 158759 GCCCC-----------------------------------GTTGCTGGTCCT s panTro5.chr22 3794719 17 + 37823149 gcccc-----------------------------------attgctggtcct i panTro5.chr22 I 81 C 0 s gorGor5.CYUI01000689v1 5661 17 - 112215 gcccc-----------------------------------gttgctggtcct i gorGor5.CYUI01000689v1 I 75 C 0 s nomLeu3.chr7b 687641 17 - 115148730 gcccc-----------------------------------attgctgatctt i nomLeu3.chr7b I 75 C 0 s colAng1.NW_012115910v1 6730142 52 - 6934359 gccccacccctgaccctgtctctgtcctggctctagccaagttgctggtcct i colAng1.NW_012115910v1 I 34 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e cerAty1.NW_012006010v1 27273 78 - 38383 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=21767.000000 s hg38.chrUn_KI270749v1 136682 20 + 158759 GCCATGGCCCTTGTCCTGAC s panTro5.chr22 3794736 20 + 37823149 gccatggctcttatcctgac i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 5678 20 - 112215 gccatggcccttgtcctgac i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 687658 20 - 115148730 gacatggcccttgtcctgac i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27351 20 - 38383 GCCATGGCCGTGTTCCTGAC i cerAty1.NW_012006010v1 I 78 C 0 s colAng1.NW_012115910v1 6730194 20 - 6934359 gccatggccgtgttcctgac i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=29376.000000 s hg38.chrUn_KI270749v1 136702 19 + 158759 ATTGCCCTTTCCTGGT------TCT s panTro5.chr22 3794756 19 + 37823149 attgccctttcctggt------cct i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 29215 16 + 66344 ATTGCCCTTTcctggt--------- i panPan2.chrUn_NW_014019468v1 M 531 C 0 s gorGor5.CYUI01000689v1 5698 19 - 112215 attgccctttcctggt------tct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 687678 25 - 115148730 attgccctttcctggtaatggtcct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27371 19 - 38383 ATTGCCCTTTcctggt------cct i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6730214 19 - 6934359 attgccctttcctggt------cct i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=684881.000000 s hg38.chrUn_KI270749v1 136721 330 + 158759 GGCCCTGGCCCT-GTCCCAGCCCTGCTCTGGCCCTGGTCTGAACCCTGGCCCTGCAATAGACCTGCCTTGGTCCTGCCCACACCCTGGCTCTGGCCCTACCTCTGCCCTGGCCATACCCTTGCCCTGGCCTGGACC------CCAGTCCTGGTCCTTGTCCTGCCCCAGCCATGGCCCTGGCCCTGCCCTGCCTGTGCCCTGTTCTATCCTGGGCTGGCCCTGCCATGACCTGGTCTTGCCATTGCCCTGCCCTAGCCTGCCATGCTTGTGCCCTAGATCTGCCCCGCTTGTGCCCTAGATCTGCCCCAGCCTTTGCCCCTGTCTTGGTTCTAACCT s panTro5.chr22 3794775 308 + 37823149 ggccctggccct-gtcccagccctgctctggccctggtctgaaccctggccctgcaatggaccctccttggtcctgcccagaccctggttctggccctacctctgccatggccatacccttgccctggcctggacc------ccagtcctggtccttatcctgccccagctgtggccctggccctgccctgcctgtgccctgttctatcctgggctggccctgccatggcctggtcttgccattgccctgccctagcctgccctgcttgtgccctagatctgccctg----------------------gcctttgcccctgtcttggatccagcct i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 29231 305 + 66344 --ccctggccct-atcccagccctgctctggccctggtctgaaccctggccctgcaatggacctgccttggtcctgcccagaccctggctctggccctacctctgccctggccatacccttgccctggcctggacc------ccggtcctggtccttgtcctgccccagctgtggccctggccctgccccgcctgtgccctgttctatcctggactggccctgccatggcctggtcttgccattgccctaccctagcctgccctgcttctgccctagatctgccccg----------------------gcctttgcccc-gtcttggttctatcct i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 5717 330 - 112215 ggccctggccct-gtcccagccctgctctggccctggtctgaaccctggccctgcaatagacctgccttggtcctgcccagaccctggctctggccctacctctgccctggccatacccttgccctggcctggacc------ccggtcctggtccttgtcctgccccagccgtggccctggccctgccctgcctgtgccctgttctatcctgggctggccctgccatggcctggtcttgccattgccctgccctagcctgccctgcttgtgccctagatctgcctcgcttgtgccctagatctgccccggcctttgcccctgtcttggttctagcct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 687703 306 - 115148730 ggccctggccct-gtctgagccctgctctggccctggtctgaaccctggccctgcaatggacctgccttggccctgcccagaccctggctctggccctacctctgccctggccatacacttgccctggcctgcacc------ctggtcctggtcctag-cctgccccagccatggccctggccctgccctgcctgtgccctgtTCTATCCTGGGCTGGCCCTGCCATGGCCTGGTCTTGCCATTGCCGTGCCCTAGCCTGCCCTGCTTGTGCCCTAGATCTGCCCCG----------------------GCCTTTGCCCT-GTATTGGTTGTAGCCT i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27390 309 - 38383 ggccctggccctggccctggccctgccccggccctggTCTGAACTCCGGCCCTGCAATGGACCTGCCTTGGCCCTGCCTAGACCCTGCCTCTGGCCCTACTTGTGCCCTGGCCATACCCTTGCCCTGGACTGGACT------CTGATCCTGATCCTTGTCCTGCCCCAGCTGTGGCCCTGGCCCTGCCCTGCCTGTACCCTGTTCAATCCTGGGCTGGCCCTGCCGTTGCCTGGTCTTGCTATTGCCCTGCCCTAGCCTGCCTTGCTTGTGCCCTAGATCTGCCCCG----------------------GCCTTTGCTCTTTTCTTGGTTCTAGCAC i cerAty1.NW_012006010v1 C 0 C 0 s manLeu1.NW_012099899v1 72042 302 + 473220 ggccctggccct-gcgccagccctaatctggccctaatctgaatcctggccctgcaatggacctgctttatccctgcccagaccctggctctggtcctacctctgccttggccatacccttgccctggcctggac------------cctggtccttatccttccccaaccacggccctggccccaccttgcctgtgccctgttctgtcttgggctggccctgccatggcctggtcttgttattgccctgccctagcctgccctgcttgtgccctagatctgccctg----------------------gcctttgctcctgtcttggttctagccg i manLeu1.NW_012099899v1 I 312 C 0 s colAng1.NW_012115910v1 6730233 314 - 6934359 ggccctgggcct-gccctggccctgctctggccctggtctgaaccccggccctgcagtggacctgccttggccctgcctagatcctggctctggccctacctctgccctggccataccctcaccctggcctgcagtctggtcctggtcctggtccttgtcctgccccagctgtggccctggccctgccctgCCTGTACCCTGTTCTATCCTGGGCTGGCCCTGCCATGGCCTGGTCTTGCTATTGCCCTGCCCTAGCCTCCCTTGCTTGTGCCCTAGATCTGCCCCG----------------------GCCTTTGCTCTTGTCTTGGTTCTAGCAC i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=654216.000000 s hg38.chrUn_KI270749v1 137051 264 + 158759 TGACTCAGCCCTGGACCTTCCCTGACCTTGCCTCAGCCCTGGCACTACCCTGGCCTTGCCTTGGCATTTGCCCTACCCTCTCTATGGCCTGGCTGTGGTCCTGCCCTGCTCTGCTCTTCTTCTGTCC----TGGCACAGCCCTGGCCCTGGCCGTGGCCCTG------CTGTATCACTGGCTCTGGTCCTGCCCTTATGCAGACCTGACCCTGCCACTGCCTTGGCTTTGGCCTGGACCTTGGCCATACAGTGACCCTGCCATGACCCTTTCCT s panTro5.chr22 3795083 264 + 37823149 tgactcagctctggaccttccctgaccttgcctcagccctggcactaccctggccttgccttggcattttccctactctctctatggcctggctctggtcctgccctgctctgctcttgttctgtcc----tggcacagccctggccctggccctggccctg------ccatatcactggttctggtcctgcccttatgcaggcctgaccctgcccctgccttggctttggcctggactttggccatacagtgaccctgccatgaccctttcct i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 29536 253 + 66344 tgactcagccctggaccttccctgaacttgcctgagccctggcactaccctggccttgccttggcatttgccctactctctctatggcctggctctggtcctgcc-----ctgctcttgttctgtcc----tggcacagccctggccc------tggccctg------ccgtatcactggctctggtcctgcccttatgcaggcctgaccctgcccctgccttggctttggcctggaccttggccatacagtgaccctgccatgaccctttcct i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6047 264 - 112215 tgactcagccctggaccttccctgaccttgcctcagccctggcactaccctggcattgccttggcatttgccctactctctctatggcctggctgtggtcctgccctgctctgctcttgttctgtcc----tggcacagccctggccctggccctggccctg------ccgtatcactggctctggtcctgcccttatgcagacctgaccctgccactgccttggctttggcctggaccttggccatacagtgaccctgccatgaccctttcct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688009 244 - 115148730 TGACTCAGCCCTGGACATTCCCTGACCTTGCCTCAGCCCTGGCACTACCCTAGCCTTGCCTTGGCATTTGCCCTACTCTCTCTATGGCCTGGCTCTGGCCCTGCATTGCACAGGCCATGCTCTGCCCTGCGTGTCCCAGCCTGGGCCC-AGCCCTGGTCTTA------CCATATTCCTGGCCCCAGCCGTAGCCTTTT-----TCTGGCCCTGACCTTGCCCTGGCCCTCTCCTGGGCCTT------------------CCTTGGTCATTCCCT i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27699 253 - 38383 TGAGTCAGCCCTGGACCTTCCCTGACCTTGTCTCAGCCCTGGCACTGCCCTGGCCTTGCCTTGGCATTTGCCCTACTCTCTCTAATGCCTGCCTCAGATCCTGCCTTGCTCTGCTCTTGTTCTGTCC----TGGCACAgccctggccctggccctggccctggt-----------------cctggtcctgccctTCTGCAGGCCTGACCCTGCCACTGCTCTGTCTTAGACCTGGACCTTGGCCATACAGTGACCCTGCCTTGACCCTTTCCT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43294018 270 - 75399963 TGACTCAGTcctggacctcctctgaccttgcctcagccttggcactaccctggccttaccttggcatttgccctgccctctctatggtgtggctctggtcctgccctgttctgctcttgttctgtcc----tggcacagccctggccttggccctgcccctggtgctgccatatccctggccctggccctgccctcatgcagacctgaccctgcccttgccctggctttggcctggaccttggccatatggtgactctgccatgacccttccct i chlSab2.chr5 I 3383 C 0 s manLeu1.NW_012099899v1 72344 270 + 473220 tgactcagtcctggacttcctctgaccttgcctcagccttggcactaccctggcctttccttggcgtttgccctgccctctctacggcgtggctctggtcctgccctgttctgctcttgttctgtcc----tggcatagccctggccttggccctgcccctggtgctgccatatccctggccctggtcctgcccttatgcagacctgaccctgcccttgccctggctttggcctggaccttgaccatatagtgactcttccatgacccttccct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730547 235 - 6934359 TGACTCAGCCCTGGACCTTCCCTGACCTTGCCTCAGCCCTGGCACTGCCCTGGCCTTGCCTTGGCATTTGCCCTGCCCTCTCTATGGTGTGGCTCTGGTCCTGCCCTGTTCTGCTCTTGTTCTGTCC----TGGCACAGCCCTGGC-----------------------------------CCTGGTCCTGCCCTTATGCAGGCTTGACCCTGCCACTGCCCTGGCTTTGACCTGGACCTTGGCCATACAGTGACCCTGACTTGACGCTTTCCT i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=319656.000000 s hg38.chrUn_KI270749v1 137315 140 + 158759 GGCCCTGGCCTGGAACCTGGCCCTGCCAAGGACTCGCCCTGGCTCTGTCATGGCCCTGGCCCTTTCCTGGATTTGGATGTGTCCTGTCCCTTATTTGCCCCAGCCCTTCCCTGGCTCTGCCATACCCCTTCTCTGGGGTA s panTro5.chr22 3795347 140 + 37823149 ggccctggcctggaacctggccctgccaaggactcgccctggctctgtcatggccctggccctttcctggatttggatgtgtcctgtcccttatttgccctggcccttccctggctctgCCATACCCCTTCTCTGGGGTa i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 29789 140 + 66344 gtccctggcctggaacctggccctgccaaggactcgccctggctctgtcatggccctggccctTTGCTGGATTTGGATGTGTCCTGTCCCTTATTTGCCCCAGCCCTTCCCTGGCTCTGCCATACCCCTTCTCTggggta i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6311 140 - 112215 ggtcctggcctggaacctggccctgccaaggactcgccctggctctgtcatggccctggccctttcctggatttggatgtgtcctgtcccttatttgccccggcccttccctggctctgCCATACCCCTTCTCTGgggta i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 27952 140 - 38383 GGCCCTGGCCTGGAACGTGGCCATGCCAAGGACTCGCCCTGGCTCTGTCATGGCCCTGGCATTTTATTGGATTTGGATGTGTCCTGTCCCTTATTTGCCCCAGCCGTTCCCTGGCTCTTCCCTTCCACTTCTCTGGGGTA i cerAty1.NW_012006010v1 C 0 I 2 s chlSab2.chr5 43294288 140 - 75399963 ggccctggcctgaaacctggccctgccaaagactcgccttggctctgtcatggccatggccctttcctggacttggacgtgtcctgtccctTATTTACCCTGGCCGTTCCCTGGCTCTGCCCTACCTCTTCTCTGTTCTA i chlSab2.chr5 C 0 I 15 s manLeu1.NW_012099899v1 72614 140 + 473220 ggccctggcctggaacctggccctgccaaagactcgccctggctctgtcatggctatggccctttctgggacttggacgtgtcctgtcccttatttgccctggcccttccctggctctgccctCCCTCTTCTCTGTTCTA i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730782 140 - 6934359 GGCCCTGGCCTGGAACCTAGCCCTGCCAAGGACTCGCCCTGGCCCTGTCATGGCCCTGGCATTTTCTTGGATTTGCTTGTGTCCTGTCCCTTATTTGCCCCAGCCCTTCCGTGGCTCTGCCCTTCCACTTCTCTGGGGTA i colAng1.NW_012115910v1 C 0 I 2 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e nomLeu3.chr7b 688253 0 - 115148730 C a score=26884.000000 s hg38.chrUn_KI270749v1 137455 29 + 158759 GGGCCAGGGTCAGGACCAGACCAGGGCAG s panTro5.chr22 3795487 19 + 37823149 gggccagggtcaggaccag---------- i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 29929 19 + 66344 ggaccagggtcaggaccag---------- i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6451 29 - 112215 gggccagggtcaggaccagaccagggcag i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 28094 29 - 38383 GGGACAGGGTCAGGACCAGGCCAGGGCAG i cerAty1.NW_012006010v1 I 2 C 0 s manLeu1.NW_012099899v1 72754 15 + 473220 ----Taggggtagggccag---------- i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730924 29 - 6934359 gggacagggtcaggaccaggccagggcag i colAng1.NW_012115910v1 I 2 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e chlSab2.chr5 43294428 15 - 75399963 I e nomLeu3.chr7b 688253 0 - 115148730 C a score=74310.000000 s hg38.chrUn_KI270749v1 137484 39 + 158759 GGTCAGGACCAGGGTAGGGCCATGGTAAGGCCTGAAGAT s panTro5.chr22 3795506 27 + 37823149 ------------ggtagggccatggtaaggcctgaagat i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 29948 27 + 66344 ------------ggtagggccatggtaagtcctgaagat i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6480 39 - 112215 gttcaggaccagggtagggccatggtaaggcctgaagat i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 28123 39 - 38383 GGTAAGGACCAGGGTAGGGCCTTGGTAAGGCCTGAAGAT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43294443 39 - 75399963 ggtcaggaccagggtagggtcatggtaaggcctgaagat i chlSab2.chr5 I 15 C 0 s manLeu1.NW_012099899v1 72769 39 + 473220 ggtcacgaccagggtggggccatggtaagacctggagat i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730953 39 - 6934359 ggtcagaaccagggtagggccttggtaaggcctgaagat i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e nomLeu3.chr7b 688253 0 - 115148730 C a score=28152.000000 s hg38.chrUn_KI270749v1 137523 8 + 158759 GGGAAGGG s panTro5.chr22 3795533 8 + 37823149 gggaaggg i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 29975 8 + 66344 gggaaggg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6519 8 - 112215 gggaaggg i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 28162 8 - 38383 GGGAAGGG i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43294482 8 - 75399963 gggaaggg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 72808 8 + 473220 gggaaggg i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01010889v1 1396 8 - 1640 gggaaggg i nasLar1.chrUn_JMHX01010889v1 N 0 N 0 s colAng1.NW_012115910v1 6730992 8 - 6934359 gggaaggg i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e nomLeu3.chr7b 688253 0 - 115148730 C a score=64773.000000 s hg38.chrUn_KI270749v1 137531 29 + 158759 CCAGGGCAGCGGCTGGACCAGGGAAGGGT s panTro5.chr22 3795541 29 + 37823149 ccagggcagcggcagaaccagggaagggt i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 29983 29 + 66344 ccagggcagcggcaggaccagggaagggt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6527 29 - 112215 ccagggcagcggctggaccagggaagggt i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 28170 29 - 38383 CCAGGGCAGCGGCAGGGCCAGGGAAGGGT i cerAty1.NW_012006010v1 C 0 I 6475 s chlSab2.chr5 43294490 29 - 75399963 ccagggtagtgacagggccatggaggggt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 72816 29 + 473220 ccagggtagcaacagggccatggaggggt i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731000 29 - 6934359 ccagggcagcggcagggccagggaagggt i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e nomLeu3.chr7b 688253 0 - 115148730 C a score=1318267.000000 s hg38.chrUn_KI270749v1 137560 648 + 158759 CAGGGCCAGGGATGTAGTAGGACTAGGGGCAGAGCCAGCACT-----------AGGGCTGAGCCAGGGCAGAGCAGGAGAGATTACTTTAGGCTATTATGTAAAATTTTTATTTTAGATTTTTAAGATAACTATAGTAGTAGTAAT---GTCTA--TACTATGTTGTTTGTGATAGTAATAATATTTGTAGTA---A----TCACTAAATTTTAACTAATACTATCTTTGCTTCCAGTAGTGTTCTATGAGTATAATTTTATCAACATGTAAATATGTGAGGCAttgattctcacaataattctatgtgctaggtacttaaagcatctccattttccaaatgtaggaaa--------caggcataaagaagttaaatacttggccaGAt---------tactcctgtaatcccagcactttgggaggccaaggcaggcagatggcttgagctcaggagtttggaaccagcctgggcaacattgtgaaaccccatctctact-aaaaatgcacaaaaaGAACTAATTT--------AAGTTTCTTGTAGGATTCTGGTTATAAAACACTGGTCAAACACacagggcatggatagggcagggccagggacaaggtcaggccaggaaggGGCCAGGGCCAAGGCAGGGCCAGAGCTGGACTTGGAGGTGTCCTGGTC-TGATTtgccctgccccgacgttg s panTro5.chr22 3795570 655 + 37823149 cagggccagggttgtggtaggactaggggcagagccggcact-----------agggctgagccagggcagagcaggAGAGATTATATTAGGCTATTATGTAAAATTTTTATTTTAGATTTTTAAGATAACTATAGTAGTGGTAATAATGTCTA--TACTATGTTGTTTGTAATAGTAATAATATTTGCAGTA---aataatcactaaattttaactaatactatctttgcttccagtagtgttctatgagtataattttatcaatatgtaaatatgtgaggcattgattctcacaataattctatgtgctaggtacttaaagcatccccattttcagaatgtaggaaa--------caggcataaagaagttaaatacttggccaGAt---------tactcctgtaatcccagcactttgggaggccaaggcaggcagatggcttgagctcaggagtttggaaccagcctggtcaacattgtgaaaccccatctctact-aaaaatgcacaaaaaGAGCTGATTT--------AAGTTTCTTGTAGGATCCTGGTTATAAAACACTGGTCAAACACAcagggcatggatagggcagggccagggacaaggtcaggtcaggaaggggccagggccaaggcagggccagagcTGGACTTGGAGGTGTCCTGGTC-TGATTTGCCCTGCCTCAATGTtg i panTro5.chr22 C 0 C 0 s panPan2.chrUn_NW_014019468v1 30012 648 + 66344 cagggccagggatgtggtaggactaggggaagagctggcact-----------agggctgagccagggcagagcaggAGAGATTACATAAGGCTATTATGTAAAATTTTTATTTTAGATTTTTAAGATAACTATAGTAGTAGTAATAATGTCCA--TACCATGTTGTTTGTAATAGTAATAATATTTGCAGTA---AATAATCAGTAAATTTTAACTAATACTATCTTTGCTTCCAGTAGTGTTCTATGAGTATAATTTTATCAATATGTAAATTTGTGAGGCAttgattctcacaataattctatgtgctaggtacttaaaccatccccattttccaaatgtaggaaa--------caggcataaagaag--------ttGGCCAGAt---------tactcctgtaatcccagcactttggaaggccaaggcaggcagatggcttgagctcaggagtttggaaccagcctgggcaacattgtgaaaccccatctctactaaaaaatgcacaaaaaGAACTGATTT--------AGGTTTCTTGTAGGATTCTGGTTATAAAACACTGGTAAAACACacagggcatggacagggcagggccagggacaaggtcaggccaggaaggGGCTAGGGCCAAGGCAGGGCCAGAGCTGGACTTGGAGGTGTCCTGGTC-TGATTTGCCCTGCCCCAACGTTG i panPan2.chrUn_NW_014019468v1 C 0 N 0 s gorGor5.CYUI01000689v1 6556 648 - 112215 cagggccagggatgtagtaggactaggggcagagccggcact-----------agggctgagccagggcagagcaggAGAGATTACTTTAGGCTATTACGTAAAATTTTTATTTTAGATTTTTAAGATAACTATAGTAGTAGTAAT---GTCTA--TACTATGTTGTTTGTAATAGTAATAATATTTGCAGTA---A----TCACTAAATTTTAACTAATACTATCTTTGCTTCCAGTAGTGTTCTATGAGTATACTTTTATCAACATGTAAATATGTGAGGCAttgattctcataataattctatatgctaggtacttaaagcatccccattttccaaatgtaggaaa--------caggcataaagaaggtaaatacttggccaGAt---------tactcctgtaatcccagcactttgggaggccaaggcaggcagatggcttgagctcaggagtttggaaccagcctgggcaacattgtgaaaccccatctctact-aaaaatgcacaaaaaGAACTAATTT--------AAGTTTCTTGTAGGATTCTGGTTATAAAACACTGGTCAAACACAcagggcatggatagggcagggccagggacaaggtcaggccaggaaggggccagggccaaggcagggccagagctggACTTGGAGGTGTCCTGGTC-TGATTTGCCCTGCCCCAACGTtg i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 34674 648 - 38383 caggcccagggatatggtgagactaggggcagagccagcgct-----------agggctgagccagagcagagcaggtcagaTTATATTAGGCTATTATTTACAAATTTTGTTTTAGATTTTTGAGGTAACTAtagtagtaataataatatctg--tattatgttgtttgtaatagcagtagtatttgtagta---AATCATTACTAAATTTTAATTTATACTTTCTTTGCTTTCGGTAGTGTTCTATGAGTATAATTTTATAAATACGTATATATGTGAGGCATCGattctcacaattactctatgtgcttggtacttatggcatccccattttcctaacataggaaa--------cagacctaaagaggttaagtacttggccagat-----------------tactcccagcactttgggaggccaaggcagggggatggctcgagctcgggagattgggaccagcctggacaacactgtgaaaccccatctccact-aaaaatgtacaaaaatAGCTTATTA--------AAGTTTCTTGTAGGTTTCTGGTTGCAAAACACTGGTCAAATACACAGGGCTTGGTTTGGGCTgggccggggacaaggtcaggccaggaaggggccagggccaaggcagagccagagctagACTTGGAGGTGTCCTGGCCCTGATTTGCCCTGCCCCAACGTTG i cerAty1.NW_012006010v1 I 6475 C 0 s chlSab2.chr5 43294519 686 - 75399963 cgggaccagggatatggtaggact-ggggcagcaccagcactagggctgagcgagggcagggccagggcagagcaggAGAGATTACGTTAGAATATTATTCAAAAATTTTATTTTATATTTTTAAGataactataatagtagtaatactatgta--tactatgtaatgtgtaataataataacgatagtagtaGTTACtaataactagattttaaccagtactttctttgttcctggtactgtcttaggagtataactatataaatatgtatatatgtgaggtattaattctcacagtaactttatgtactaggtgcttatagcattcccattttccaaatgtaagaaa--------caggcataaagaggttaaataCTTggcctggcacagtggctcactcctgtaatcccagcactctgggaggccaagtctggtggatggcatgagctcaggagttcgggaccagcctgggcaacattgtgaaaccctgtctctact-aaaaatgcagaaaaatagctgATTAGTTTGTTTAAGTTCCTTGTAGGATTCTGGTTATGAAACATTGGTGAAATACACAGGGCATGGATAGGGCAGGGCCAGAGATAAGGTCAGGCCAGGGAGGGGCCAGGGCCAAGGCAGGGCCAGAGCTGGACTTGAAAGTGTCCTGGCCTTGATTTgccctgccccaaccttg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 72845 686 + 473220 cagggccggggatatggtaggactagagacagggccagtgct-----------agggcagagccaggTCAGAGCAGGAAAGATTATGTTAGAATATTATTTAAAATTTTGTTTTTAGGTTTTTAAGATAACTATAATAGTAACAATATTGTCTATGTACTATGTTATTTGCAATAGTAACAATGTTTGTGATAGTTagtaataactaaattttaaccagtactttctttgtttctggtactattttaagagtatagctatataaatgggtatatatgtgaggcattaattctcacagtaactctatatagtaggcacttacagcatccccattttccaaatgtaaaaaaggttacgtttggcataaagaggttaaataCTTggcctggcacggtggttcactcctgtaatcccagcactctgggaggccaagtctggtggacggcatgagctcagaagttcgggagcagcctgggcaacattgtgaaaccctgtctctact-aaaaatgcagaaaaatagcTCATTagtttgtttaagttccttgtaggattctggttatgaaacattggtcaaatACACAAAGCATGGACAGGGCAGGGCCAGAGATAAGGTCAGGCCAGGGAGGGGCTAGGGCCAAGGCAGGGCCAGAGCTGGACTTGGAAGTGTCCTGGCCTTGATTTGCCCTGCTCCAAccttg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731029 647 - 6934359 cagggccagggatatggtaagactaggggcagagccagcgct-----------tgggctgagccagggcagagcaggAGAGATTACATTAGGCTATTATTTAGAAATTTTGCTTTAGATTTTTAAGATAACTATAGTAGTAATAATAATATCTG--TACTATGTTGTTTGTAATAGCAATAGTATTTGCAGTA---AATAATTACTAAATTTTACCTTGTACTTTTTTT-CTGCCGGTAGTGTTTTGTGAGTATAATTTTATAAATATGTATATATGTGAGGCAttgattctcacaattactctatgtgctaggtacttatggcatccccattttcctaacgtaggaag--------cagacttaaagaggttaagtacttggccaGAT-----------------tactcccagcactttgggaggccaaggcaggtggatggctcgagctcaggagattgagaccagcctggacaacactgtgaaaccccatctctact-aaaaatgcacaaaaatagcTTATTA--------AAGTTTTTTGTAGGATTTTGGTTATAAAGCACTGGTCAAATACACAGGGCATGGTTTGTGcagggccagggacaaggtcgagccaggaaggggccagggccaaggcagggccagagctagACTTGGAGGTGTcctggccctgatttgccctgccccaaggttg i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e nomLeu3.chr7b 688253 0 - 115148730 C a score=482402.000000 s hg38.chrUn_KI270749v1 138208 294 + 158759 gcccagccctgctctggcacgtcctgtcatgccctgtccctggcctgagcattggccctgtccctgtcctgcttctggccctgccccggagttgaccaggcactgccatggcccagtcctg-cattgccctgccctcctctgccctggtgctaccatggccctgcttgggccctagctctgcctcgactctggacctgccctgactctgctcagccctggatctaccctgactctgccttggtgtt-gccctcccatctctatggcctggctctggccatgccttgcacaggccat s panTro5.chr22 3796225 294 + 37823149 gcccagccctgctctggcacttcctgtcatgccctgtccctggcctgagcattggccctggccctgtcctgcttctggccctgccctggagttgaccaggcactgccatggcccagtcctg-cattgccctgccctcctctgccctggtgctgccatggccctgcttgggccctagctctgcctcgactctggacccgccctgactctgctcagccctggatctactctgactctgccgtggtgtt-gccctcccatctctatggcctggctctggccctgccttgcacaggccat i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 7204 293 - 112215 gcccagccctgctctggcacgtcctgtcatgccctgtccctggcctgagcattggccctggccctgtcctgcttctggccctgccccggagttgaccaggcactgccatggcccagtcctg-cattgccctgccctcctctgccctggtgctaccatggccctgcttgggccctagctctgcctcgactctggacctgccctgactctgctcagccctggatctaccctgactctgccttggtgtt-gccctcccatctctatggcctggctctggccatg-cttgcacaggccat i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 35322 288 - 38383 GCCCAGCCCTGCTCTGGCACTTCCTACCATGCCCTGTCCCTGGCCTGAGCATTGGCCCTGGCCCTGTCCTGCTTCTGGCCCTGTCCTGGAGTTGACCAGGCGTTGCCATGGCCCAGTCCTGCCATCGCCTTGC---CCCCTGTCTTGGTGTTGCCGTGGCCTTGCCTTGGCCCTAGCTCTGCCTCAACCCTCGACCTGCCCTGACCCTGCTCAGCCCTGGAACTACCCTGCCTCTGCCTTGGTGCTGGTCCTCTCCTCTGTATGGCCTGGCTCTGGCCCTGCCTTGTA-----CAT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43295205 296 - 75399963 gcctgtccctgctctggtgcttcctgccatggcctgtgcctgtcctgagcattagctctggccctgtccttcttctagccctgccctggagttgaccaggcactgctatggcccagtcctgccattgtcctgttgtcttctgccctggtattgtcgtggccctgcctgggtcctagccctgcctcgactctggacctgccctgaccctgctcagccctggaactaccctgactttgccttggtgttggccctcccttctctatggcctggctctggccctgccttgcacaggccat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 73531 296 + 473220 gcctgtccctgctctggcacttcctgccatgccctgtccctgtcctgagcattagctctggtcctgtcctgcttctggccctgccctggagttgaccaggcatcgccatggcccagtcctgccattgtcctgccctcctctgccctggtattgtcatggccctgcctggaccctagccctgcctcaactctggacctgccctgaccctgctcagccctggaactaccctgactctgccttggtgttggccctcccctctctatggcctgactctggccctgccttgcacaggccat i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731676 288 - 6934359 gcccagccctgctctggcatttcctgccatgccctgtccctggcctgagcattggccctggccctgtcctgcttctggccccgtcctggagttgaccaggcgttgccatggtccagtcctgccatcgccttgc---cctctgtcctggtgctgccgtggccctgccttggccctagctcttcctcaaccctcgagctgccctgaccgtgctcagccctggagctaccctgactctgccttggtgttggccctctcctctctatggcctggctctggccctgccttgta-----cat i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e nomLeu3.chr7b 688253 0 - 115148730 C a score=969606.000000 s hg38.chrUn_KI270749v1 138502 508 + 158759 gctctgccctgcatgccccagcctgggcccagccctcatcctaccatattcctgaccccagccatacccttgttctggccatgaccctgccatggccctctcctggcccttccttggtcctgccctgcccttccatgccctggccttgccctcaccctgcattggccctgcactggtcctgccctgccctggcactgccttggccccggccctgccttctccctggccttgcctttgccctgccctggcctgaccccaggcctaccgagtccatgaaatggccctggacctgccttgccatcctctgtcctggccctgtattgtccccaccatgctctggtccagcgcttgccctagccctgttgctagtcctgccactgctatggccctgctctgtttttggccatgcgctgtgctaccctagccctgccctgccttggccttggccctaccatgg-ccttctcctaccctggcctggccgtatactggcctt-ttctaccctggcctt s panTro5.chr22 3796519 498 + 37823149 gctctgccctgcatgtcccagcctgggcccagccctttccctaccatattcctgaccccagccgtacccttgttctggccttgaccctgccgtggcactctcctggcccttccttggtcctgccctgcccttccatgccctggcctttccttcaccctgca-----------ctggtcctgccctgccctggcagtgccttggctccagccctgccttctccctggccttgccctttccctgccctggcctgaccccaggcctaccgagtccatgaaacaaccctggacctgccttgccgtcatctgtcctggctctgtattgtccccaccatgctctggtccagcgcttaccctggccctgttgctagtcctgccactgctatggccctgccctgtttttggccatgccctgtgctaccgtagccctgccccgccttggccttggccctaccgtgg-ccttttcctaccctggccttgcccttccctggtcttgccctgccctggcctt i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 7497 475 - 112215 gctctgccctgcgtgccccagcctgggcccagccctcatcctaccatattcctgaccccagccatacccttgttctggccatgaccctgccgtggccctctcctggcccttccttggtcctgccctg-ccttccatgccctggccttgccctcaccctgcattggccctgcactggtcctgccctgccctggcactgccttggccccggccctgccttctccctggccttgcctttgccctgccctggcctgaccccaggcctactgagtccatgaaatggccctggacctgccttgccatcctctgtcctggccctgtattgtccccaccatgctctggtccagcgcttgccctagccctgttgctagtcctgccactgctatggccctgctctgtttttggccatgccctgtgctaccctagccctgccctgccttggccttggccctaccctgg-cctt---------------------------------ttctaccctggcctt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688253 508 - 115148730 GCTCTGCCCTGCGTGTCCCAGCCTGGGCCCCGCCCTGGTCTTACCATATCCCTCGCCCCAGCCGTACACTTTTTCTGGCCCTGACTTTGCCCTGGCCCTCTCCTGGCCCTTCCTTGGTTGTTCCCTGCTCTTCCATGCCCTGGCCTTGCCCTTACCCTGCATTGGCCCATCACTGTTCCTACCCTACCCTGGCACTGCCTTGGCCCCAGCCCTGCCTACTCCCTGGCCTTGCCCTTCCCCTGCCCTGGCCTGACCCCAGGCCTACGGAGTCCATGAAATGGCCCTGGACCTGCCTTGCCATCCTCTGTCCTGGCCCTGTATTGTCCCCACCATGCCCTGGTCCAGCGCTTGTCCTGGCCCTGTTGCTAGTCCTGCCACTGCTATGACCTTGCCCTGTTTTTGGCCATGCCTTGTGCTAccctagccctgccctgccttggccttggccctaccatgg-ccttctcctaccctggcctggccttaccctggtctt-ttctaccctggcctt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35610 497 - 38383 GCTCTGACCTGCATGTCCCAACCTGGGCCCAGCCCTGGTCCTACCGTGTTCCTGGCCCTGGCCGTACCCTTGTTCTGGCCCTGACCGTGCCCTGGCCCTCCTCTGGCACTTCCTTGGTCCTGCTCTGCCCTTCCATGTCCTGGCCTTGCCCTCA-----------CCCTGCACTGGTCCTGCTCAGCCCTGACACTGCCTTGACCCCGACCCTGCCTTCTCCCCAGCCTTGTCCTTGCCCTGCCCTGGCCTGACCCTGGGCCTGCCATGTCCATGACATGGCCCTGGACCTGCCTTGCCATTCTCTGTCCTCGTCTTGTATTGTCCCCACCATGCTCTGGTCCAGCCCTTGCCCTGGCCCTGTTGCCAGTACTGCTACTACTATAGCCCTACCCTGTATTTGGCCATGCCCTGTGTTACCATAGCCCTGCCCTGCGTTGGCCCTGGCCCTACCCTGG-CCTTCTCTTATCCTGGCCTGTCCCTACCCTGGCCTT-TTCTACCCTGGCCTT i cerAty1.NW_012006010v1 C 0 N 0 s chlSab2.chr5 43295501 471 - 75399963 gccctgccctgtgcgtcctagcctgggcccagccctggttctaccatattcctggccctggccgtacccttgtcctggccctgaccctgccctggccctgtcctggcccttccttggtccttccctgcccttccatgccccggccttgccctca----------------------ccctgcactgccctggcactgccttggccctgg-----------ccctgccttctccctggccgtacccttgcctgcccctgggcctaccctgtccatggcatggccctggacctgccttgtcatcctctgttctggccatatattgaccccaccgtgccttgatccagcacttgccctggccctgtgcttagtcctgcccctgctatggccctgatctgcttttggccatgccctgtgctaccctaaccctgccctaacctggttctgacctggccttgg------ccctaccctggccttctcctaccctggccttgccctaccctgttctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 73827 493 + 473220 gccctgccctgtgcgtcccagcctgggcccagccctggttctaccgtgttcctggccctggctgtaccattgtcctggccctgagcctgctctggccttgtcctgacccttccttggtccttccctgcccttccacgccgcagccttgccctca-----------ccctgcattggccctgcattgccctggcactgccttggccctgg------cttctctccggccttgccctggccctacccttgcctgcccctgggcctaccctgtccatgacatggccctggacctgccttgtcatcctctgttctggccgtgtattgtccccaccatggcctggtccagtgcttgccctggccctgtgcctagtcctgccgctgctatagtcctgccctgcttttggccatgccctgtgctactctagccctgccctgacctgcttctgacctggccctggccctacccctaccctggccttctcctaccctggccttgtcctaccctggcctt i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731964 507 - 6934359 gctctg-cctgcatgtcccaacctgggcccagccctggtcctaccgtgttcctggccctggccgtacccttgttctggccccgaccctgccctggccctcttctgccccttccttggtcctgctctgcccttccatgccctggccttgccctcaccctacactggccctgcactggtcctgctcagccctgatactgccttgaccccggccctgccttctccccggccttgtccttgccctgccctggcctgaccctgggcctaccatgtccatgacatggccctggacctgccttgctgttctctgtcctggtcttgtattgtccccaccatactctagtccagcccctgccctggccctgttggtagtcctgctactactatggccctgccctgtttttggccatgtcctgtgttaccgtggccctgccctgcattggccctggccctgccctgg-ccttctcttatcctggcctgcccctaccctggcctt-ttctaccctggactt i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=10868.000000 s hg38.chrUn_KI270749v1 139010 10 + 158759 gcccttccct s panTro5.chr22 3797017 10 + 37823149 gccctgccct i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 7972 10 - 112215 gcccttccct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688761 10 - 115148730 gcccttccct i nomLeu3.chr7b C 0 I 1 s chlSab2.chr5 43295972 10 - 75399963 gccatgccct i chlSab2.chr5 C 0 I 66 s manLeu1.NW_012099899v1 74320 10 + 473220 gccctgtcct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6732471 4 - 6934359 ------ttct i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=6133.000000 s hg38.chrUn_KI270749v1 139020 9 + 158759 ggtcttggc s panTro5.chr22 3797027 9 + 37823149 ggccttggc i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 7982 9 - 112215 gatcttgcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688772 9 - 115148730 ggtcttgcc i nomLeu3.chr7b I 1 C 0 s manLeu1.NW_012099899v1 74330 9 + 473220 ggccttggc i manLeu1.NW_012099899v1 C 0 I 62 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e colAng1.NW_012115910v1 6732475 0 - 6934359 C e chlSab2.chr5 43295982 66 - 75399963 I a score=753.000000 s hg38.chrUn_KI270749v1 139029 2 + 158759 ct s panTro5.chr22 3797036 2 + 37823149 tt i panTro5.chr22 C 0 I 54 s gorGor5.CYUI01000689v1 7991 2 - 112215 ct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688781 2 - 115148730 ct i nomLeu3.chr7b C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 74339 62 + 473220 I e colAng1.NW_012115910v1 6732475 0 - 6934359 C e chlSab2.chr5 43295982 66 - 75399963 I a score=10833.000000 s hg38.chrUn_KI270749v1 139031 25 + 158759 gccctggccttgccctgcactggcc s gorGor5.CYUI01000689v1 7993 24 - 112215 gcc-tggccttgccctgccctggcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688783 25 - 115148730 gccctggccttgccctgccctggcc i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012115910v1 6732475 24 - 6934359 acc-tggccttgcccttccctggcc i colAng1.NW_012115910v1 C 0 I 51 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 74339 62 + 473220 I e chlSab2.chr5 43295982 66 - 75399963 I e panTro5.chr22 3797038 54 + 37823149 I a score=4613.000000 s hg38.chrUn_KI270749v1 139056 17 + 158759 ttggctttgccttatcc s gorGor5.CYUI01000689v1 8017 17 - 112215 ttggctttgccttatcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688808 17 - 115148730 ttggctttgccttgtcc i nomLeu3.chr7b C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 74339 62 + 473220 I e colAng1.NW_012115910v1 6732499 51 - 6934359 I e chlSab2.chr5 43295982 66 - 75399963 I e panTro5.chr22 3797038 54 + 37823149 I a score=2499.000000 s hg38.chrUn_KI270749v1 139073 5 + 158759 tggtc s gorGor5.CYUI01000689v1 8034 5 - 112215 tggtc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688825 5 - 115148730 tggtc i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296048 5 - 75399963 tggtt i chlSab2.chr5 I 66 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 74339 62 + 473220 I e colAng1.NW_012115910v1 6732499 51 - 6934359 I e panTro5.chr22 3797038 54 + 37823149 I a score=68834.000000 s hg38.chrUn_KI270749v1 139078 61 + 158759 ctggttctgcc---------------------------------------------ctgaccctggccttgctctggccctgtccctggcccagccttgaccctga s panTro5.chr22 3797092 67 + 37823149 ctggttctgcc---------------------------------------ttctccctggccctgcccttgctctggccctgtccctggctcagccttgaccctgg i panTro5.chr22 I 54 C 0 s gorGor5.CYUI01000689v1 8039 106 - 112215 ctggttctgccctgaccctggccttgctctggatcctctctggttctgctttctccctggccctgcccttgctctggccctgtccctggcccagccttgaccctga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688830 106 - 115148730 ctggttctgccttgtccctgaccttgctctggatcctctctggttctgccttctccctggccctgcccttgctctggccctgtccctggcccagccttaaccctgg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296053 61 - 75399963 ------ctgcc---------------------------------------ttctccctggtcctgcccttgctctggccctgtccctggcccaggcttgaccctgg i chlSab2.chr5 C 0 I 5 s manLeu1.NW_012099899v1 74401 61 + 473220 ------ctgcc---------------------------------------ttctccctggctctgcccttgctctggccctgtccctggcccaggcttggccctgg i manLeu1.NW_012099899v1 I 62 I 6 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e colAng1.NW_012115910v1 6732499 51 - 6934359 I a score=25344.000000 s hg38.chrUn_KI270749v1 139139 35 + 158759 ccctggccctgacaatccccaggtctgacactggc s panTro5.chr22 3797159 35 + 37823149 ccctggccctgacaatccccaggccccacactggc i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 8145 35 - 112215 ccctggccctgacaatccccaggtctgacactggc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688936 21 - 115148730 ccctggacctgacaatcccca-------------- i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296119 35 - 75399963 acctggccctgtgttggtcctggcctggccctggc i chlSab2.chr5 I 5 I 28 s manLeu1.NW_012099899v1 74468 24 + 473220 acctgtccctgcg-----------ctggtcctggc i manLeu1.NW_012099899v1 I 6 I 54 s colAng1.NW_012115910v1 6732550 35 - 6934359 ccctggccctgacaatgcccaggccccacactggc i colAng1.NW_012115910v1 I 51 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=35929.000000 s hg38.chrUn_KI270749v1 139174 60 + 158759 catg-cttggccctggcccctccttttggccctgccc---------------------------tgtccctg------------------------ccttggccctgtgcta s panTro5.chr22 3797194 83 + 37823149 aatg-cttggccctggcccctccttt-ggccctgccc---------------------------tggccctgtgctatcttagtacagggccttggccttggccctgtgcta i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 8180 60 - 112215 catg-cttggccctggcccctccttttggccctgccc---------------------------tggccctg------------------------ccttagccctgtgcta i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688957 34 - 115148730 ---------------------------ggccctgccc---------------------------tggccctg------------------------ccttggccctgtgcta i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296182 86 - 75399963 catgccttggccttggcccctcctt--agtcctgccctgggcctgtgctctcttattcttcctctgaccctt------------------------ccttggtcctgtgcta i chlSab2.chr5 I 28 C 0 s colAng1.NW_012115910v1 6732585 49 - 6934359 catgccttgaccctggcccctcctt---------------------------------------tggccctg------------------------ccctggccctgtgcta i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I e manLeu1.NW_012099899v1 74492 54 + 473220 I a score=523244.000000 s hg38.chrUn_KI270749v1 139234 363 + 158759 tcttagtcctgccctgaccctgaact----cgccctggccctaccctcaccctacactggccccgccctaccctggccttgccctgccctggccctgcctttggcctgctgtggctctggttctgccctggccttgccc-------------------------------------------------------ttgccctggactctccctggccatgttttttccatggtccttctctggccttgcccttgccctgtcctctttctggtcctgccatgtttctggccctgccctgtccatgtcctggacctgactctggccctggatctccctgtccctgccctgccataccctggcctgttccttgctctacactgaccctgccctgccttggccctgtgctaccctagccctgccctg s panTro5.chr22 3797277 363 + 37823149 tcttagtcctgccctggccctgaact----cgccctggccctaccctcaccctacactggccctgccctaccctggccttgccctgccctggccctgcctttggcctgccctggctctggttctgccctggccttgccc-------------------------------------------------------ttgccctggaccctccctggccatgtttttactgtggtccttctctggccttgcccttgccctgtcccctttctggtcctgccatatttctggccctgccctgtccatgtcctggacctgactctggccctggacctccctgtccctgccctgccataccctggccagttccttgctctacactgaccctgccctgccttggccctgtgctaccctagccctgccctg i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 8240 363 - 112215 tcttagtcctgccctggccctgaact----cgccctggccctaccctcaccctacactggccccgccctaccctggccttgccctgccctggccctgcctttggcctgctctggctctggttctgccctggccttgccc-------------------------------------------------------ttgccctggaccctccctggccatgttttgtccatggtccttctctggccttgcccttgccctgtcccctttctggtcctgccatgtttctggccctgccctgtccatgtcctggacctgactctggccctggacctccctgtccctgccctgccataccctggcccattccttgctctacactgaccctgccctgccttggccctgtgctaccctagccctgccctg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 688991 284 - 115148730 tcttagtcctgtcctggccctgaact----tgccctggccctaccctcaccctacactggccctgccctaccctggccttgccctgccctggccctgcttttggcctgccctggctctggttctgccgtggacttgccc-------------------------------------------------------ttgccctggatcctccctggccatgt--------------------------------------------------tttttccatggtcctt-----------------------------ctctggccttggacctccctgtccctgcccttccataccctggcccgttccttcctctacactgaccctgccctgccttggccctgtgctacccaagccctgccctg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296268 358 - 75399963 tcttagttc---------------------tgccctggccctgccctcaccctcccctggccctaccctaccctggccctgccctgccttggccctgcctttggcctgccctggctctggttctgccttggccctacccttgccctggccctgccc--------------------------------------ttgccctggtccctccctggtcatgcttttttcctggtccttctgtggccttgcccttgccctggcccctttctggtcctgtcatgtttctgaccctgcaccgtccatgtcctggaacttgctctggctctggacttccctgtcccagccctgccacacctgggcctagtccttgctctaca-----cttgccttgccttggccctgtgctaccctagccctgccctg i chlSab2.chr5 C 0 N 0 s manLeu1.NW_012099899v1 74546 384 + 473220 ccttggtcctgccctggccctgtggtatcttgccctggccctgccctcacccttccctggacctgccctcccctggccttgccctgccctggccctgcctttggcctgccctggctctggttctgccctggccctgcccttgctctggctctgccc--------------------------------------ttgccctggtacctccctggccatgctttttgtctaggtcttctctggccttgcccttgccctggcccctttctggtcctgacatatttctggccctgtcctgtccatgtcctggacctggctctggccctgaacttccctgtccctgccctgccacaccctggcctagtccttgctctacactggccttgccctgccttggccctgtgctaccctagccctgccctg i manLeu1.NW_012099899v1 I 54 N 0 s colAng1.NW_012115910v1 6732634 417 - 6934359 tcttagtcctgccctggccctgaact----caccctggccctaccctccccctactctggccctgccttaccctggccttgccctgccatgaccttgcctttggcatgccctggctctggttctgccctggccctgcccttgccctggaccctccctggtcatgtttttccctggtccttctttggccctttcgttgccctggaccttccctagccatgttttttccctggtccttctctggccttgcccttgccctggcccctttctgatcctgccgtgtttctgg-cctgccctgtccatgtcccagacctgactctggccctggacttacctgtccctgacctgccataccctgacccattccttgctctacactgaacctggcctgccttggccctgcgctacgctaacccttctctg i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=38596.000000 s hg38.chrUn_KI270749v1 139597 47 + 158759 accttctgctgaccctgatcctgccatggccctggccctgccatgtc s panTro5.chr22 3797640 47 + 37823149 gccttctgctggccctgatcctgccatggccctggccctgccatggc i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 8603 47 - 112215 gccttctgctgaccctgatcctgccatggccctggccctgccatgtc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 689275 47 - 115148730 gccttctcctggccctgatcttgccacggcccttgccctgccatgtc i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012115910v1 6733051 47 - 6934359 accctctgctggccctggtcctgccatgggcctggccctgccatgtc i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003913010v1 82924 4072 - 139415 I a score=6263.000000 s hg38.chrUn_KI270749v1 139644 5 + 158759 cctgt s panTro5.chr22 3797687 5 + 37823149 cctgt i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 8650 5 - 112215 cctgc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 689322 5 - 115148730 cctgc i nomLeu3.chr7b C 0 C 0 s papAnu3.chrUn_NW_003913010v1 86996 5 - 139415 cctgt i papAnu3.chrUn_NW_003913010v1 I 4072 N 0 s colAng1.NW_012115910v1 6733098 5 - 6934359 cctgt i colAng1.NW_012115910v1 C 0 C 0 a score=105621.000000 s hg38.chrUn_KI270749v1 139649 136 + 158759 cctggccctggttctgcgctgcttctggccctagccttagtcctctcatgtccctggctgtgaccctgcccctggtttttctctggccatgaccctgccccagttctgtcctatacctggccctgtctcagttctg s panTro5.chr22 3797692 136 + 37823149 cctggccctggttctgccctacttctggccctggccttggtcctctcatgtccctggctgtgaccctgcccctggtttttctctggccatgaccctgccccggttctgtcctatccctggccctgtctcagttctg i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 8655 134 - 112215 cctggccctggttcttccctgcttctggccctggccttggtcctctcatgtccctggctgtgaccctg-ccctggtttttctctggccatgaccctgccccagttctgtcctat-cctggccctgtctcagttctg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 689327 136 - 115148730 ccttgccctggttctgccctgtttctggccctggacttggtcctgtTGTGTCCCTGTCTGTGACCCTGCCCCTGGTTTTTCTCTGGCCATGACCCTGCCCCAGTTCTGTCATATCTCTGGCCCTGTCTCAGTTCTG i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012115910v1 6733103 136 - 6934359 cccggccctggttccgccctgctttgggccctggccttggtcctgacttgtccctggctgcgaccctgccccttgttttaatttggccgtgaccctgcccccgttctgtcctagtcctggccctgtcccagttctg i colAng1.NW_012115910v1 C 0 N 0 a score=749554.000000 s hg38.chrUn_KI270749v1 139785 1657 + 158759 tcctagccctggcctTTCACAGTACTTTATGCCTAGTAAGGGCTCCATGGTGTCTGTGAGTTGAATGTTGTGTTCATAGTATCTGCCAAAACAGAAA-GAAAAAAACGAAATATTTTGATAAGAAGTTAAAGCTTTGTATATAATATGCCTTGAATTGTAAGT---------------------------GCCTGTTATTAGTTGTATTACATATAGGTCATGGTTTTGTACACATAACTCCAAACCATTGATACTGTTAAAAGAATATATGAATATATGAAAGAATGTGTAAACGTAAGAATGTATCAGTATCTAATGACCTTTCCAAATTAATTTTTATTTTTAGCTCTATTAGATTTTTCTCAGTGTAACAAATGTTTATTCCTATGTAATTAAGGGCGTATTTCCTGTCCAGAATATTCATATTACCTAATTGAAAATTATATGATACAAAAATATAATACTATTTTTAggccaggcatggtggctcatacctgtaatcccaacattttgagaggccaagtttggagaatcatttgagtccaggagtt---gaccagcctgggcaacatagtgagaccttgtctttattaaataaata---aataaaTAAATAggttgggcactgtggctcatatctgtcatcccagcattttgggttgccaatgcaggaggattgcttgagcccaggagtttgagaccagcctgggcagaatagcaagactccatctctacaaataataaaatattaaccaggtgtggtggtgcacacctggggtcccagctacctgggaggctaagatgggaggtttgctcgaggttgcagtgaactgtgaatgcaccactgcattccagcctaggccacagaacaggaccttgtctataaataaagaaataagtaaaaatataaataaaaataagtaaaaataaatataagtaaatataaatataaatacatataaatataaaaatgcatacatgaaaagaaacaatTTTTAAATTTAACATCACTGAGGGCATCCTATCCATTTCATTTCATGATTCCATCACATCATTTCACTTAGatgaaatgataagatgacttgagatgagatgaaatgatgagatgaaatgacaaaatgatgagatgagatgatgagatgaaattttgagatgaaatggtgagtagaaatgatgagatgaaattatgagacaaaatgacaaaattgaaaagaaattgaaag--gagatgagatgagttaaaatga--gatgaaatgatgagatga---tggatgaaatgatgagataaaacga------gccatgaaatgatgagatgaaatgaaa------------------tgaaat-----aatgaaattgaaatgagatgagatgaa--------atgagataaaatgatgagatgaaatgagatg-----------------------------------------aatgatgagatgaaatgatgagatgaaatgagatgaaaa---------------------------------atg-------atgagacgaa---------------aaatgagattaaatgaaatgaaataatgaaaggaaattatgaaatgtaatgatgaaattgaaatgaaattgaaatgagatgagttgaaatgatgagatgtaatgatgaaatgaaat--gatgaaatgagatgaaata---------atgggatgaaatgagataatgagatgagatgagatgaaatcatgaaatg--atgaaatgaaatgatgtatgaaatgatgagatgaaatgagatgaaatgtaatgagatgaaatgaactgacataat s panTro5.chr22 3797828 1685 + 37823149 tcctagccctggccTTTCACAGTACTTTATGCTTAGTAAGGGCTCCATAGTGTCTGTGAGTTGAATGTTGTGTTCATAGTATCTGCCAAAACAGAAA-GAAAAAAACAAAATCTGATGATGAGAAGTTAAAGCTTTGTATATAATATGCCTTGAATTGTAAGT---------------------------GCTTGTTATTAGTTGTATTACATATAGGTCATGGTTTTGTACACATAACTCCAAACCATTGATACAGTTAAAAGAATATATGAATATATGAAAGAATGTATAAACGTAAGAATGTATGAGTATCTAATGACCTCTCTGAGTTAATTTTTATTTTTAGCTCTATTAGATTTTTCTCAGTGTAACAAATGTTTATTCCTATGTAATTAAGGGCATATTTCCTGTACAGaatattcatattacttaattgaaaattatataatgcaaaaatataatactatttttaggccaggcatggtggctcatacctgtaatcccaacattttgagaagccaagtttggagactcatttgagtccaggagtt---gaccagcctgggcaacatagtgagaccttttctttat--------ta---aataaataaaTAGGATgggcactgtggctcatatctgtaatcccagcattttgggttgccaaggcaggaggattgcttgagcccaggagtttgagaccagcctgggaagcatagcaagactccatctctacaaataataaaatattaaccaggtgtggtggtgcgcacctggggtcccagctacctgggaggctaaggtgggaggtttgctcgaggctgcagtgaactgtgaatgcaccactgcattccagcctaggccacagaacaggaccttgtctataaat----aaataagtaaaaatataaataaaaataagtaaaaagaaatataagtaaatataaatataaatacatataaatataaaaatgaataCATTAAAACCAACAATTTTTAAATTTAACATCACTGAGGGCATCCTATCCATTTCATTTCATGATTCCATTACATCATTTCACTTAGatgaaatgataagatgacttgagatgagatgaaat-----gatgaaatgataa---gatgagatgaaatgatgagatgaaattttgagatgaaatggtgagtagaaatgaagagatgaaatggtgagacaaaatgacaaaattggaaagaaattgaaagatgagatgagatgaaatgagatgatggttgaaatgatgagatgaaacgagatgaaatgatgagaagaaatgatgagatgaaatgaaataatgaaatgaaatgaaa-------------tgatttgaaat-----gacaaaattgaaatgagatgagatgagatga---tatgagataaaatgatgagatgaaatgagatgaacgataagatgaaatgatgaaatgagatgagataagatgaaatgatgagatgaaatgatgagatgaaatgagatgaaaa---------------------------------atgagatgaaatgagatgaa---------ataatgaaatgagatgaaatgaaatgaaataatgaaaggaaattatgaaatgtaatgatgaaattgaaatgaga----------------tgaaacgatgagatgaaatgatgaaatgagatgagatgaaatgagatgaaatg---------atgagatgaaatgagatgatgagatgagatgaaatgatgagatgaaatg--atgagatgaaatga----------aatgagatgaaatgagatgtaatgaaatgagatgaaa-----tgacataat i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 8789 1691 - 112215 tcctagccctggccTTTCACAGTACTTTATGCTTAGTAAGGGCTCCATGGTGTCTGTGAGTTGAATGTTGTGTTCATAGTATCTGCCAAAACAGAAA-GAAAAAAACAAAATATTTTGATAAGAAGTTAAAGCTTTGTATATAATATGCCTTGAATTGTAAGT---------------------------GCCTGTTATTAGTTGTATTACTTATGGGTCATGGTTTTGTACACATAACTCCAAACCATTGATACTGTTAAAAGGATATATGAATATATGAAAGAATGTATAAACGTAAGAATGTATCAGTATCTAATGACCTTTCCAAATTAATTTTTAATTTTAGCTCTATTAGATTTTTCTCAGTGTAACAAATGTTTATTCCTATGTAATTAAGGGCGTATTTCCTGTACAGAATATTCATATTACCTAATTGAAaattatatgatacaaaaatataatactatttttaggccaggcatggtggctcatacctgtaatcccaacattttgagaggccaagtttggagaatcatttgagtccaggagtt---gaccagcctgggcaacatagtgagaccttgtctttattaaataaataaataataaataaataggttgggcactgtggctcatatctgtcatcccagcattttgggttgccaatgcaggaggattgcttgagcccaggagtttgagaccagcctgggcagaatagcaagactccatctctgcaaataataaaatattaaccaggtgtggtggtgcgcacctggggtcccagctacctgggaggctaaggtgggaggtttgctcgaggctgcagtgaactgtgaatgcaccactgcattccagcctaggccacagaacaggaccttgtctataaataaagaaataagtaaaaatataaataaaaataagtaaaaataaatataagtaaatataaatataaatacatataaatataaaaatgcatacatgaaAAGAAACAATTTTTAAATTTAACATCACTGAGGGCATCCTATCCATTTCATTTCATGATTCCATTACATCATTTCACTTagatgaa---ataagatgacttgagatgagatgaaatgatgagatgaaatgatgaaatgatgagatgagatgatgagatgaaattttgagatgaaatggtgagtagaaatgatgagatgaaatgatgagatgaaatgacaaaattgaaaagaaattgaaag--gagatgagatgagataaaatga--gatgaa---atgagatga---tggatgaaatgatgagatgaaacga--------gatgaaatgatgagatgaaatgaaatgaaataatgaaatgatatgaaat-----aatgaaattgaaatgagatgagatgagatgaaataatgagataaaatgatgagatgaaatgagatg-----------------------------------------aacgatgagatgaaatgacgagatgaaatgagatgaaaa---------------------------------atgag-----atgaaatgaa---------------aaatgaaattaaatgaaatgaaataaggaaaggaaattatgaaatttaatgatgaaattgaaatgaaattgaaatgagatgagttgaaatgatgagatgtaatgatgaaatgaaat--gatgaaatgagatgaaatgaatgaaataatgagatgaaatgagataatgagatgagatgagatgaaatcatgagatgaaatgaaatgaaatgatggatgaaatgatgagatgaaatgagatgaaatgtaatgagatgaaatgaaatgacataat i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 689463 1734 - 115148730 TCTTAGCCCTGGCCTTTCACGGTACTTTATGCTTAGTAAGGGCTCCATAGTGTCTGTGCATTGAATGTTGTGTTCATAGTATCTGCCAAAACAGAAAGGAAAAAAACAAAATCTGATGAT---AAGTTAAAGCTTTGTATATAATATTCCTTGAATTGTGATtattagttgtattagttattagttattagcctgttattcattgtattaCATATAGGTCATGGTTTTGTATGCATAACTCTAAACCATTGATACTGTTAAAAGAATATATGAATATATGAAAGAATGTGTAAGTGTAAGAATGTATGAGTATCTAATGACCTTTCCAAATTAATTTTCATTTTTAGCTCTATTAGATTCTTCTCAGTGTAACAAATGTTTATGCCTATGTAATTAAGGGTATATTTCCTGTACAGAATATTCCTATTACCTAATTGaaaattatataatactaaaatataatactatttttaggccaggcatggtggctcatatctgtaatcccaacattttgagaggccaagtttggagaatcatttgaggccaggagttgaagaccagcctgggcaacatagtgagaccttgtctttattaaataaata---aataaaTAAATAggttgggcactgtggctcatgtctgtaatcccagcattttgggatgccaaagcaggagaattgcttgagcccaggagtttgagaccagcctgggcagcatagcaagcctcattctctacaaataataaaatattaagcaggtgtggtggtgcacacctgtggtcccagctacctaggaggctgaggtgggaggtttgctcaaggctgcagtgaactgtgaatgcaccactgcattccagcctaggcaacagaccaagaccttgtctataaataaagaaataagtgaaaatataaataaaaataagtaaaag-aaatataagtaaatataaatataaatacatatacatataaaaatgaatacatTGAAACAAACAATTTTTAAATTTAACATCACTGAGGGCATCCTATCCATTTCATTTCATGATTCCATTACATCATTTCAGTTagatgaaatgatcagatgagttgatatgagatgaaatgatgagatgaaatgatgaaatgatgacatga---gataagatgaagttttgagatgaaatagtgagt-------------tgaaatgatgagacaaaatgacaaaattgaaaaggaattgaaag--gagatgagatg-----aaatga--gatgaaatgatgagatga---tggataaaatgatgaaatgagatga-------------aatgatgaaatgaaatgaaa-----taatgaaatgacatgaaataatgaaatgaaattgaaatgagatgagatgagatgaaataatgagttaaaatgatgagatgaaatgagatgaatgatgagatgaaatgatgaaatgagatga----------gatgataagatgaaatgatgagatgaaatgagatgaaaaattattagatgaaaaatgagatgaaatgatgagatgagatgaaatgaaatgaaataaatgaaataatgaaatgagatgaaatgaaatgagataatgaaaggaaattatgaaatgtaatgatgaaattgaaatgaaattgaaataagatga--------gataagatgaaatgatgagatgaaat--gctgaaatg--------tg---------atgagatgaaatgagatgaaatgatgagatgaaatg-----atgag-----atgaaatgagatga----------gatgaaatgaaatgaaatgaaatgtaatgagatgaaatgaaatgacataat i nomLeu3.chr7b C 0 M 100 a score=51060.000000 s hg38.chrUn_KI270749v1 141442 115 + 158759 gaaatgaaataatgaaatgagatgaaatgaaataatgaaatgatgaagtaatgaaatgaa--aatgaaatggaaatgatgagatgagaagaaatgatgagatgaaatgatgagatga s panTro5.chr22 3799513 117 + 37823149 gaaatgcaataatgaaatgagatgaaatgaaataatgaaatgatgaaatgaaatgatgaaataatgaaatggcaatgatgatatgagaagaaatgatgagatgaaatgatgagatga i panTro5.chr22 C 0 I 63 s gorGor5.CYUI01000689v1 10480 112 - 112215 gaaatgaaataatgaaatgagatgaaac---ataatgaaatgatgaaataatgaaatgaa--aatgaaatggaaatgatgagatgagaagaaatgatgagatgaaatgatgagatga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479588 114 + 115148730 gcaatgaaataatgaaatgagatgaagtgaaataatgaaatgatgaaataatgaaatgga--aatgaaatggaaatgatgagatgagatgaaattatgagatgaaatgatgaaatg- i nomLeu3.chr7b n 0 C 0 a score=7147.000000 s hg38.chrUn_KI270749v1 141557 29 + 158759 gataaaatgagatgaaatgatgagatgaa s gorGor5.CYUI01000689v1 10592 29 - 112215 gataaaatgagatgaaatgatgagatgaa i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479702 25 + 115148730 ----aaatgagatgaaatgatgagatgaa i nomLeu3.chr7b C 0 n 0 e panTro5.chr22 3799630 63 + 37823149 I a score=19106.000000 s hg38.chrUn_KI270749v1 141586 247 + 158759 atgaaatgatgagatgagatgaaatatgatgagatgaaatgacataatgaatgaaatgatgaaatggaataatgaaacggaaatgatgagatgagatgcaatgagttgaaatgagatgaaatgatgaaatgatgagatgaaatgatatgagatgtgatgaaatgatgacatgaaatgatgacataaaatgagatgaaatgagatgtaatgatggaatgagatgagatgaaatgagatgaaatgatga s gorGor5.CYUI01000689v1 10621 229 - 112215 at----------gatgagatgaaatatgatgagatgaaatgacataatgaatgaaatgatgaaatggaataatgaaacggaaatgatgagatgagatgcaatgagttgaaatgagatgaaatgatgaaatga----atgaaatgagatgagatgtgatg-aatgatgacatgaa---atgacataaaatgagatgaaatgagatgtaatgatggaatgagatgagatgaaatgagatgaaatgatga i gorGor5.CYUI01000689v1 C 0 C 0 e nomLeu3.chr7b 114479727 0 + 115148730 I e panTro5.chr22 3799630 63 + 37823149 I a score=0.000000 s hg38.chrUn_KI270749v1 141833 13 + 158759 ggtgagataaaat e gorGor5.CYUI01000689v1 10850 0 - 112215 C e nomLeu3.chr7b 114479727 0 + 115148730 I e panTro5.chr22 3799630 63 + 37823149 I a score=3344.000000 s hg38.chrUn_KI270749v1 141846 71 + 158759 aatgat---atgaaatgatgagatgaatgatgagatgaaatgagatgaa-tgatgaaatgaaatgatgagatga-----g s ponAbe2.chr2a_random 9004787 78 + 13868332 aatgatgagattaaatgatgagatga--gatgtgatgaaatgagatgaaatgatgacatgatatgatgacgtgaaatcag i ponAbe2.chr2a_random N 0 I 7035 e gorGor5.CYUI01000689v1 10850 0 - 112215 C e nomLeu3.chr7b 114479727 0 + 115148730 I e panTro5.chr22 3799630 63 + 37823149 I a score=0.000000 s hg38.chrUn_KI270749v1 141917 11 + 158759 atgagatgatg e ponAbe2.chr2a_random 9004865 7035 + 13868332 I e gorGor5.CYUI01000689v1 10850 0 - 112215 C e nomLeu3.chr7b 114479727 0 + 115148730 I e panTro5.chr22 3799630 63 + 37823149 I a score=4612.000000 s hg38.chrUn_KI270749v1 141928 56 + 158759 agatgaaatgatgagatgagataaaatgagatgaaatgatgagatgaaatgaaatg s panTro5.chr22 3799693 56 + 37823149 agatgaaataatgagatgaaatgagatgagatgaaatgatgagatgagatgaaatg i panTro5.chr22 I 63 C 0 e ponAbe2.chr2a_random 9004865 7035 + 13868332 I e gorGor5.CYUI01000689v1 10850 0 - 112215 C e nomLeu3.chr7b 114479727 0 + 115148730 I a score=29039.000000 s hg38.chrUn_KI270749v1 141984 234 + 158759 atgagatgagatgaaatatgatgagatgaaatgacataatgaa--------------tgaaatgatgaaatggaataatgaaacggaaatgatgagatgagatgcaatgagttgaaatgagatgaaatgatgaaatga---gatgaaatgatatgagatgtgatgaaatgatgacatgaaatgatgacataaaatgagatgaaatgagatgtaatgatggaatgagatgagatgaaatgagatgaaatga----------------g s panTro5.chr22 3799749 261 + 37823149 a---gatgagatgaaatgtgatgagatgaaatgatataatgaaatgaaataatgaaatgaaatgatgaaatggaataatgaaatggaaatgatgagatgagatgcaatgagttgaaatgagatgaaatgatgtgatgaaaagatgagatgagatgagatgtgatgaaatgatgacatgaaatga---cataaaatgagatgaaataagatgtaatgatgaaatgagatgagatgaaatgagatgaaatgatgagatgagatgaaatg i panTro5.chr22 C 0 C 0 s nomLeu3.chr7b 691297 195 - 115148730 ---------------atgagatgagacgaaatgatgagatgaa---------------------atgagattaaataatgagat-taaatgaggagatgagatgtgatgaaatg--atgaggtgaaatgatggcat-----gatatgttgacatgaaatccgatgaaataccgagatgaaattatgaaat--gatgagatgaaacgagatg---agatgaaatgtaacgagatgaaacgacata----------------------- i nomLeu3.chr7b M 100 C 0 e ponAbe2.chr2a_random 9004865 7035 + 13868332 I e gorGor5.CYUI01000689v1 10850 0 - 112215 C a score=831118.000000 s hg38.chrUn_KI270749v1 142218 2406 + 158759 gtgagataaaataatgatatgaaatgatgagat-gaatgatgagat-gaaatg---agatgaa--tgatgaaatgaaatgatgagatgagatgagatga--tgagatgaaatga--tgagat---gaactgatgagatgaaatgaaat----------aatgaaatgaaattgaaataaaattgaaatgagatgag-----atgaaatgatgagatgatgaaataaaatgatgaaa-------tgatgagatg---tgatgagatgaaat--gatgagatgagatgacatgaaata--atgaaatgaaataatgaaatgaaattgaaatgagatgagaagatacgagatgagatgaaatgatgagatgaaatgatgaaatgatgagataa---gatgaaaagagttgatgagatgagatgaaatgggatgaaaagagatgaaatgatgagatgaaatgaaatgatgagatgaaa-tgaggtgaaa-tgaaattagacgaaatgtaatgagatgaaatgaaatgacataatgaaatgaaaaaatgaaatgacataatgaaatgaaaaaatgaaacgaaataatgaaatgaggtgaaattaaatgagatga--tgaaattaaatgatgaaatgaaataatgaaatg------gaaatgaaac---------ggaaatgagatgaaatgacgagatgaatgatgagatgaaatga----------tgaaatgcaatgatgagatgaaatgatgaaatga---gatgagatgagatgtaatgatgagaggaaatgatgagatgtaatgaaatgagatgaaatg-aatgagatgaaatgaaataatgaaaggaaattgaattgagat---atgagatgaaatgatgagataaaatgagatgaaataa---atgatgagatgaaatgatgaaatgctga---------ggtgagatgagatgaaatgagaagatgaaacgatgagatgaaatgaaag----gatgagatgaaatgatgagatgaaatgatgagatgagat---------------------------------gagatgaaatgagatgaaatgagatgaaat------gatgaaatga-----gatgagaagaaatgatgagatgaaa------tgag-----atgagataaaatgatgagatggaatga--------aatgaagtgaaatgaaatgaaat-----aatgaaat--tgaaatgagatgagatgaaatgagataaaatgatgagatgaaatgatgagaagaaatgagatgaaatgattaaat-----gatgagatgagatgatgagataaa---------------------aaatgatgagatgaaaaatgattagatgaaatgagatgaattgaaaggaaataatgaaataatgaaatgagatgaaatgaaatgatgaaatgat---------gatactgaaatgaaattga--aagatgagatgaaat--gatgag-----atgaaatg--ttgaaatgaaatgatgaagagatatgacatgaaatg--atgagctgaaatgatgaga------tgaaatgaa--------atgaaatgagattaaatgatgagatgaaa------aatgatgagatgaa-----------aaatgatgagatgaaatgatgagatgaaatga--------gatgagatgaa-----ttgagatgagatgagatgagatgaaataatgaaattaggtgaaataatgaaatgagatgaaataatgaaataaaattgtaatgagatgagaagaaatga---gatgaaatgttgaaaagaaaggaggaaatgatgagatgagatgaaatga--tgagatgaaatga-------------at--tgagatgaaa-aatggtatgaaaaatgat---atcaaaaatatgagatgaaatgaaatgagatgatatgaaatgacataatgaaataagtgaaattagatgaaatgaaatagtgaaatgaaatga--tgaaatgaaataatgaaaattaaatggaaatgggatgagatgagatttgatgaaatgatgagatgaaatgatgagatgatatgaaatgatgagatgagatgggataagatgaaatgatgagataaaatgatgagatgaaatgatgagatgaaatgatgagatgaaatgatgaggtgaagtgaTGCACTGTCACGTGTGTGTCT-----TTTTCCCAACCAACAAAAATTATAATTCATTAA-TTTTATTTTATTATTTAAGAGTATTCTTAAGAGTTGAAGGAAAAATAATATCTGTACATTATGGGTTACAAT-TAAGTATAAATAATACGTAAATATATTAAAACTTACAAAGAATATGTTTCAGAATCGAATATACCATGCTTCTGTGATGACAGTTATTTCATGCTGGTTGTCACAATTTTACATGAAAAACTAATGAAAAAATGTTTTTAACTGTTTCTAAAAATAACTGTTTCCAAAACAGTTTTACATTCAAAATATGAAAAAGATGTATTTGTGTTCCTTAATCTGATGAGATTTTCACACTCTGCACAT---AATTGTTAGATTTTTATTGTGTTGATAAATTGTATATCAAATAAAAAATGTTATTACCTCTTAAATTAGGATTTTTAGGTGATATAGGCAGAAAGGAAGGCAAGTTTTTATAACTTT s panTro5.chr22 3800010 2266 + 37823149 gtgagataaaatgatgatatgaaatgatgagat-gaatgatgagat-gagatggtgagatgaa-atgatgagatgaactgatgagatgaaatgagatgaactgagatgaaatgaaatgaaataatgaaataatgagattaaatgaaatgaaataatgaaatgaaatgaaattgaaataaaattgaaatgagatgaa-----atgataagatgaaatgatgaaataaaatga-------------aatgagatg---tgatgagatgaaat--gatgagatgacatgacatgaaata--atgaaatgaaat-------------tgaaatgagatgagaagatacgagatgagatggaatgatga-------------aatgatgagataa---gatgaaatgagttgatgagatgat-----------------gagatgaaatgatgagatgaaatgaaatgatgagatgaaa-tga-----------aattagatgaaatgtaatgagatgaaatgaaatgacataatgaaatgaa-------------------------------gaaatgaaataatgaaatgaggtgaaattaaatgagatga--tgaaattaaatgatgaaatgaaataatgaaatg------gaaatga------------tgagatgagatgaaatgactagatgaatgatgagatgaaatgagatgaaatggtgagatgcaatgatgagatgaaatgatgaaatgatgagatgagatgagatgtaatgatgaaaggaaatgatgatatgtaatgaaatgagatgaaatg-aatgagatgaaatgaaataatgaaaggaaattgagttgagatgagatgagatgaaatgatgagataaaatgagatgaaataagaaatgatgagatgaaatgatgaaatgctga---------ggtgagatgagatgaaa---ggagatgaaatgatgagatgaaatgaaag----gatgagatgaaatgatgagatga---gatgaaatgagat---------------------------------gaggtgagatgaaatgagatgagatgaaat------aatgaaatga--tgagatgagaagaaaggatgagatgaaa------tgaggtaaaatgagatgaaatgatgagatgagatga--------aatgaaataaagtgaaatgaaat-----aatgaaat--tgaaatgagatgagatgaaatgagataaaatgatgaga-------------agaaatgagatgaaatgatgaaat-----gatgagatgagatgatgagatgaa---------------------aaatgatgagatgaat----------tgaaatgagatgaa-------------atgaaataatgaaatgagatgaaatgaaatgatgaaatga----------aatattgaaatgaaactga--aagatgagatgaaat--gatga----------aatg--ttgaaatgaaatgatgaa-----atgaagagatgtg--gtgagatgaaatgatgaga------caaaatgaa--------atgaaatgagattaaatgatgagatgaaatg---agatgatgacatga----------------gattagatgaaatgatgagatga------------------gatgaa-----ttgagatgagattagatga-----aataatgaaattaggtgaaataatgaaatgagatgaaatga-aaaatgaaattgaaatgaggtgagaagaaatgatgagatgaaatgttgaaa-----ggaggaaatgatgagatgagatgaaatga--tgagatgaaatgatgagatgaaatgaat--tgagatgaaatgatgagatgaaaaatgat---atgaaaaatg---------atgaaatgagatgatatgaagtgacataatgaaataaatgaaattagatgaaatgaaatagtgaaatgaaatga--tgaaat-----aatgaaaatgaaatggaaatg-----agatgagatttgatgaaatgatgagatgaaatgatgagatgata----------ggatgagataaaatgagatgaaatgatgagatgaaatgatgaaatga--------gatgaaatgatgagatgaaatgatgaggtgaagtgaTGCACTGTCACGTGTGTGTCTACTCTTTTTCCCAACCAACAAAAATTATAATTCATT----TTAATTTTATTATTTAAGAATATTCTTAAGAGTTGAAGGAAAAATAGTATCT--ACATTATGAGTTACAATCTAAGTATAAATAATACATAAATATATTAAAACTTACAAAGAATATGTTTTGGAATCGAATATACCATGTTTCTGTGATGACAGTTATTTCATGCTGGTTGTCACAATTTTACATGAAAAACTAATGAAAAAATGTTTTTAACTGTTTCTAAAAATAACAGTTTCCAAAACAGTTTTACATTCAAAATATGAAAAAGATGTCTTTGTGTTCCTTAATCTGATGAGATTTTCACACTCTGCACATGATAATTGTTAGATTTTTATTGTGTTGATAAATTGTATATCAAATAAA---TGTTATTACCTCTTAAATTAGGATTTTTGGGTGATATAGGCAGAAAGGAAGGCAAGTTTTTGTAACTTT i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10850 2244 - 112215 gtgagataaa---atgatatgaaatgatgagat-gaatgatgagat-gaaatgat-gaatgaa--tgatgaaat----------gatgagatgagatga--tgaaatgaaatg---tgagat---gaactgatgagatgaaatgaaat----------aatgaaatgaaattgaaataaaattgaaatgagatgagatgaaatgataagatgagatgatgaaataaaatgatgaaatgagatgtgatgagatgaaatgatgagatgaaat--gatgagatgacatgacatgaaata--atgaaatgaaataatgaaatgaaattgaaatgagatgagaagatacgagatgagatgaaatgatgagatgaaatgatgaaatgatgagataa---gatgaaaagagttgatgagatgaa-----atgagatgaaaagagatgaaatgatgag-----atgaaatgatgagatgaaa-tgaggtgaaa-tgaaattagacgaaatgtaatgagatgaaatgaaatgacataatgaaatgaa---------------------------aaatgaaatgaaataatgaaatgaggtgaaattaaatgagatga--tgaaattaaatgatgaaatgaaataatgaaatg------gaaatga--------------------aatgaaatga-gagatgaatgatgagatgaaatga----------tgagatgcaatgatgagatgaaatgatgagatga-------------------atgatgagaggaaatgatgagatgtaatgaaatgagatgaaatg-aatgagatgaaatgaaataatgaaaggaaattgaattgagat---atgagatgaa---atgagataaaatgagatgaaataa---atgatgagatgaaatgatgaaatgctga---------ggtgagatgagatgaaa---tgagatgaaacgatgagatgaaatgaaagaagagatgaaatgagatgaaatgatga---gatgaggtgagat---------------------------------gagatgaaatgagatgaaacgagatgaaat------gatgaaatga-----gatgagaagaaatgatttgatgaaa------tgag-----atgagataaaatgatgagatgaaatga--------aatgaagtgaaatgaaatgaaataatgaaatgaaat--tgaaatgagatgagatgaaatgagataaa---atgaga-------------tgaaatgagaagaaatgatgaaat----------gatgagatgatgagatgaa---------------------aa---atgagatgaaa-------------aatgagatgaa-------------atgag--gatgaaatgaaat--aatgaaatgatgaattgat---------gatattgaaatgaaattga--aagatgagatgaaat--gatgagatgaaatgaaatg--ttgaaatgaaatgaagag---atgtgacatgaa-----atgagctgaaatgatgag-----------atgaa--------atgaaatgagattaaatgatgagatgaaa------aatgatgagatga-------------------------aaatgatgagatgaaatga--------gatgagacgaa-----ttgagatgagatgagatgagatgaaataatgaaattaggtgaaataatgaaatgagatgaaataatgaaataaaattgaaatgagatgagaagaaatga---gatgaaatgttgaaa-gaaaggaggaaatgatgagatgagatgaaatga--tgagatgaaatga-------------atgatgagatgaaa-aatgatatgaaaaatgat---atcaaaaaca-----tgacatgaaatgaaat-atatgaaatgacataatgaaataaatgaaattagatgaaatgaaatagtgaaatgaaatga--tgaaatgaaataatgaaaatgaaatggaaatgagatgagatgagatttgatgaaatgatgagatgaaatgatgagatgatatgaaatgatgagatgagatgggataagatgaaatgatgagataaaatgatgagatga---------------------aatgaaatgatgaggtgaagtgatgCACTGTCACGTGTGTGTCT-----TTTTCCCAACCAACAAAAATTATAATTCATTAA-TTTTAATTTATTATTTAAGAATATTCTTAAGAGTTGAAGGAAAAATAATATCTGTACATTATGGGTTACAAT-TAAGTATAAATAATACATAAATATATTAAAACTTACAAAGAATATGTTTCGGAATCGAATATACCATGCTTCTGTGATGACAGTTATTTCATGCTGGTTGTCACAATTTTACATGAAAAACTAATGAAAAAATGTTTTTAACTGTTTCTGAAAATAA--GTTTCCAAAACAGTTTTACATTCAAAATATGAAAAAGATGTCTTTGTGTTCCTTAATCTGATGAGATTTTCACACTCTGCACATGATAATTGTTAGATTTTTATTGTGTTGATAAATTGTATATCAAATAAAAAATGTTATTACCTCTTAAATTAGGA-TTTTAGGTGATATAGGCAGAAAGGAAGGCAAGTTTTTATAACTTT i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 691492 2496 - 115148730 atgaaatgaaataatgaaatgaaatgatgaaatggaataatgaaatggaaatg---aaatggaaatgatgagattatataa---aatgagttgaaatga--tgagatgaaatgagatgaaatgctgaaatgatgggatgaaatgagatgagatatgt-gatgaaatga---tgacatgaaatgatgacaaaatgat------------gatgaaatgatgagatgtaatgatgaaa-------tggtgagatgtaatgatgaaatgagacaagatgaaatgaggtgaaatgaaatgacatgagatgaaatggtgagatga---tgatatgaaatgatgagatgaatcatgagatgaaatcatgagatgatgagatgaaatgattagatgaaatgatgagatgaaatgattagatgaaatg--atgagatgaaatgaaatgaaataatgagatgaaatgaaataatgaagtgaaattgaaataaaattgaaatgagatgagatgaaatgagatgaaataagatgaaataatgaaataaa-------------------------------atgacgaaatgatgagatgtgatgagatgaaatgagatgaggtgaaataatgaaatgagatgaaataatgaaatgaaaaatgaaatgagatgagaagatattagatgagatgaaatgatgagatgaa--atgagataagatgaaatgagttaatgagatgagatgatgagatgaaaagagatgatga---gatgagatgaaatgaaatgatgatatgaa---atgagatgaaatgaaattagacaaaatgtaatgagatgaaatgacataatgaaatgaaa----------aa---atgaaatgaaataatgaaatgaggtgaaattaaatgag--atgatgaaattaaatgatgaaataatgaaatggaaatgatgagatgagatgaaatgatgagatg-aatgatgagatgaaatgaaat--gaggtgagatgaaatgatgagattcaatgatgagatgaaataatatgaaatgcgatgagatgtaatgatgagaggaaatgagatgtaatgaaatgagatgaaatgaatgagatgaaatgaagtgagatgaaatgaaataatgaaaggaaattgaattgag-----attagatgaaacgatgagataaaatgatgagatgtaataagaaatggtgagatgaaat-----gatgaaatgctgaggtgaggtgagatgaaatgagaggaaatgatgagatgaaatgagataaaatgataagatgaaatgataagatgaaaggatgagatgaaatgatgagatgaaatgatgagatgaggtgagatgaaatgatgagatgaaa--tggtgagatgaggtgagatgag-------------atgaaatgatgagatgaaat--ggtgaaatgatgagatgagatgagaagaaatgatgagatgaaatgagataagatgagatgaaatgagatgaaatgaaatgaggtgaaatgaaatgaaataatgaa-----atgaaatgagatgaaatgaaaagaaatgatgaaatgatattgaaatgaaattgaaagatgagatgagatgaaatgatgagatgaaatgacaaaatgttgaaatgaaatgatgaagagatgtggtgagatgaaatgatgagatgaaatgagattaaatgatgagatgaaaaatgatgagatgacatgagatgagatgaaataatgaaattaggtgaaataatgaaatgaaatgaaataa-----------tgaaatgagatgagatgaaatgatgagatgaaatgtcaaaatgaaaggatgaaatgatgaaatgagatgaaatgaactga-atgaactga-----------------tgagatgaaa-aatgatgtgaaaaatgatgagatgaaaaaca----------tgaaatgagatgatatgaaatgacacaatgaaataa-tgaaatgaaattagatgaaacagtgaaatgaaatgaagtgaaat-----------aatgaaatggaaatg----------agatttgatgaaatgatgagatgatatgatgaaatgatg----------agatgagatgggatgaggtgaaatgatgagataaaatgatgagatga---------atcatgaaatgagatgaaatgatgaggtgaagtgatgCACTGTCACGTGTGTGTCTATTCATTTTCCCAACCAAAAAAaattataattcattaattttaattttattatttaaGAATATTCTTAAGAGTTGAAGGAAAAATAATATCTGTACATTATGGATTACAATCTAAGTATAAATAATACATAAGTATATTGAAACTTAAACAGAATATATTTTGGAATCGAATATACCATGCTTCTGTGATGACAGTTATTTCATGCTGGTTGTCACAATTTTACGTGAAAAACTAATGAAAAAATGTTTTTAACTGTTTCTAAAAATAACAGTTTCCAAAACAGTTTTACTTCCGAAATATGACAAAGATGACTTTGTGTTCCTTAATCTGATGAGATTTTCACACTCTGCACAAGATAATTGTTAGATTTTTATTGTGTTGATAAATTGTATATCAAATAAAAAATGTTATAACCTCTTAAATTAGGATTTTTAGGTGATATAGGCAGAATGGAAGGCAAGTTTTTATAACTTT i nomLeu3.chr7b C 0 I 315 e ponAbe2.chr2a_random 9004865 7035 + 13868332 I a score=680537.000000 s hg38.chrUn_KI270749v1 144624 1299 + 158759 GTCTAAATGAACTTTCTAAATGCCTGAGTATTAAAAGATAGCATGTCTATAAATCACAATATATATATTACTGTATGACGTAGGACAAATCAAAACCATTACCTCTGATAACATTATATTGTGCCCAGTATAAAATAGATATAATAATACCTCAAACTTAAATCCAGGCATTGTCATTGAATATCTTAAGAATATGCAGCAAAGGTGCTTTTAAAAATACAAGCtagtgattgtactaaatttgtaaatcacataggatagtgggtcattttaagaata----ttatttcaatctataaacgtggatgtctttccttttttgtgttttctttaatttctttcattaatatttgtcatttttgttgtcaaaatcttttacttccttggttaaatttatctctaagtacatttttgtagctattgtaaaaggaattactttcttaatttcttgtttcagctagtttactatcaatatgtagaaatgctactgatttttgtatgttgatttatatcctgcaactttattaatttcatgtatcaccctaagaagcttttggtagagtcttatttttttccatgtataagatcacattgtctttaaacagggacaatttgactgtctcctttccaattcagatgtcctttatttctttctctcacctaatcgtcctggctaagactttcactatgtgaaatatgattggtgaaaatagacatcctttttttgttccagtataatctttttcttgttcacagtaaaatttttcaccttttccacactcagtatgatcttagctgtagatttgtcctttatgtcctt-tgtgttaaggcatatattttctatactaaattgatgagaggttttttgtcatgtaagaatatttaattttgccaaacacttttattgtgtttgttaatttaaccatatggttttCAgtatatatccaaagcaaagaaaatcagtatatcaaagagttacctgcacccccatgtttattacagcactatgcacagtagccaagatatggaatcaacaaaagtgtccatcaacagatgaatggataaagaaatgtgacatacatatataatggaatattatttagtcataataaagaacaaaatcctgttatttgtggcaacaagaatgcaagtggagggcattatcttaggtgaaataagcctggcatagaaacataaacaccacataactacgtgttctcacttatgtatggaagctaaaatttttaatctcgtagaaatagata---gtagagttttggttaccatatcctggaaagagtaggag s panTro5.chr22 3802276 1304 + 37823149 GTCTAAATGAACTTTCTAAATGCCTGAGTATTAAAAGATAGCATGTCTATAAATCACAATGTATATATTACTGTATGACCTAGGACCAATCAAAACTGTTACCTCTGATAATATTATATTGTGCCCAATATAAAATAGATATAATAATACCTCAAACTTAAATCCAGGCATTGTCATTGAATATCTTAAGAATATGCAGCAAAGGTGTTTTTAAAAATACAAGCtagtgattgtactaaatttgtaaatcacataggatagtgggtcattttaagaatattagttatttcaatctataaacatggatgtctttccttttttgtgttttctttaatttctttcattaatatttgtcatttttgttgtcgaaatcttttacttccttggttaaatttatttctaagtacatttttgtagctattgtaaaaggaattgctttcttaatttcttgtttcagctagtttactatcaatatatagaaatgctactgatttttgtatgttgatttatatcctgcaactttattaatttcatgtatcaccctaagaagcttttggtagcgtcttatttttttccgtgtataagatcacattgtctttaaacagggacaatttgactgtctcctttccaattcagatgtcctttgtttctttctctcacctaattgtcctggctaagactttcactatgtgaaatatgattggtgagaataggcatccttttcttgttacagtaaaatctttttcttgttcacagtaaaatctttcaccttttccacactcagtatgatcttagctgtagatttgtcctttacgtccttccgtgttaaggcatatattttctatactaaattgttgagaggttttttgtcatgtaagaatatttaattttgccaaacgcttttattgtgtttattaatttaatcatatggctttCAgtatatatccaaaggaaaaaaaatcagtatatcaaagagttacctgcacccgcatgtttattacaacactattcacaatagccaagatatggaatcaacaaaagtgtccatcaacggatgaatggataaagaaatgtgacatacatatataatggaatattatttagtcataataaagaacaaaatcctgttatttgtggcaacaagaatgcaagtggagggcattatgttaggtgaaataagcctggcatagaaacataaacaccacataactacgtgttctcacttatgtatggaagctaaaatttttagtctcatagaagtagata---gtagagttttggttaccatatcctggaaagagtaggag i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 13094 1296 - 112215 GTCTAAATGAACTTTCTAAATGTCTGAGTATTAAAAGATAGCATGTCTATAAATCACAATGTATATATTACTGTATGACCTAGGACCAATCAAAACCGTTACCTCTGATAACATTATATTGTGCCCAGTATAAAATAGATATAATAATACCTCAAACTTAAATCCAGGCATTGTCATTGAATATCTTAAGAATATGCAGCAAAGGTGCTTTTAAAAATACAAGCtagtgattgtactaaatttgtaaatcacataggatagtgggtcattttaagaata----ttatttcaatctataaacgtggatgtctttccttttttatgttttctttaatttcttt-attaatatttgtcatttttgttgtcgaaatcttttacttccttggttaaatttatttctaagtacatttttgtagctattgtaaaaggaattgctttcttaatttcttgtttcagctagtttactatcaatatatagaaatgctactgatttttctatgttgatttatatcctgcaactttattaatttcatgtatcaccctaagaagcttttggtagagtcttatttttttccatgtataagatcacattgtctttaaacagggacaatttgactgtctcctttccaattcagatgtcctttatttctttctctcacctaattgtcctggctaagactttcactatgtgaaatatgattggtgagaataggcatccttttcttgttccagtaaaatctttttcttgttcacagtaaaatctttcaccttttccacactcagtatgatcttagctgtagatttgtcctttatgtcctt-tgtgttaaggcatatattttctatactaaattgttgagaagttttttgtcatgtaagaatatttaattttgccaaacgcttttattgtgtttattaatttaatcatatggttttCAgtatatatccaaaggaaagaaaatcagtatatcaaagagttacctgcacccccatgtttattacagcactattcacaatagccaagatatggaatcaacaaaagtgtccatcaacagatgaatggataaagaaatgtgacatacatatataatggaatattatttagtcataataaagaacaaaatcctgttatttgtggcaacaagaatgcaagtgg-gggcattatgttaggtgaaataagcctggcatagaaatataaacaccacataactacgtgttctcacttatgtatggaagctaaaatttttaatctcgtagaagtagata---gtag-gttttggttaccatatcctggaaagagtaggag i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 694303 1295 - 115148730 GTCTAAATGAACTTTCTAAATGCCTGAGTATTAAAAGATAGCTTGTCTATAAATCGCAATGTGTATATTACTGTATGACCTAGGACCAATCAAAACTGTTATCTCTGATAATATTATATTGTGCCCAATATAAAATAGATATAATAGCACCTCAAACTTAAATCCAGGCATTGTCATTGAGTATCTTAAGAATATGCAGCAAAGGTGCTTTTAAAAATACAAGCtagtgattgtactaaatttgtaaatcacataggatagtggatcattttaagaata----ttatttcaatctataaacgtggatgtctttccttttttgtgttttctttaatttctttcattaatatttgtcacttttgttgtagaaatcttttacttccttggttaaatttatttctaagtacatttttgtaactattgtaaaaggaattgcttt-ttaatttcttgtttcagctagtttactatcattatatagaaatgctactgatttttgtatgttgatttatatcctgcaactttattcatttcatttatcaccctaagaagctcttggtagagtcttatttttttccatgtgtaagatcgcattgtctttaaacagggacaatttga-------atttccaattcagatgtcctttatttctttctctaacctaattgtcctggctaagactttcactatgtgaaatatgattggtgaaaacaggcatccttttcttgttccagtaaaatctttttcttgtttacagtaaaatctttcaccttttccacattcagtatgatcttagctgtagatttgtcctttatgtccttccgtgttaaggcatatattttctatactaaattgttgagaggttttttgtcatgtaagaatatttaattttgccaaatgcttttattgtgtttattaatttaatcatatggttttCAgtatatatccaaaggaaagaaaatcagtatatcaaagagttacctgcacccccatgtttattacagcactattcataatagccaggatatggaatcaacataagtgtccatcaacagatgaatggataaagaaatgtgacatacatatataatggaatattatttagtcatagtaatgaacaaaatcctgttatttgtggcaacaagaatgcaagtggagggcattatgttaggtgaaataagcctggcatagaaacataaacaccacataactacatgttctcacttatgtatggaagttaaaatttttaatctcgtagaagtagataatggtagagttctggttaccatatcctggaaagagtaggag i nomLeu3.chr7b I 315 C 0 e ponAbe2.chr2a_random 9004865 7035 + 13868332 I a score=2947.000000 s hg38.chrUn_KI270749v1 145923 12 + 158759 acagaagagtat s panTro5.chr22 3803580 12 + 37823149 aaagaagagtat i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 14390 12 - 112215 aaagaagagtat i gorGor5.CYUI01000689v1 C 0 C 0 e ponAbe2.chr2a_random 9004865 7035 + 13868332 I e nomLeu3.chr7b 695598 0 - 115148730 C a score=0.000000 s hg38.chrUn_KI270749v1 145935 1020 + 158759 aagaaaaatgtggttttgatttgcatttctctgatggccagtgatgatgagcatttcttcatgtgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtccttcgcccactttttgatggggttgtttgtttttttcttgtaaatttgtttgagttcattgtagattctggatattagccctttgtcagatgagtaggttgcgaaaattttctcccatgttgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagaactcatAGttaaaaccactatgagatatcatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgcggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcgattcctcagggatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaatgagtataaatcatgctgctataaagacacatgcacatgtatgtttattgcggcactattcacaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagacataaaaaatgatgagttcatatcctttgtagggacatggatgaaattggaaaccatcattctcagtaaactatcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaattgaacaatgagatcacatggacacaggaaggggaatatcacactctggggactgtggtggggaggggggagggatagcattgggagatatacctaatgctagatgacacattagtgggtgcagcgcaccagcatggcacatgtatacatatgtaactaacctgcacaatgtgcacatgtaccctaaaacttagagtataataa e ponAbe2.chr2a_random 9004865 7035 + 13868332 I e gorGor5.CYUI01000689v1 14402 0 - 112215 C e nomLeu3.chr7b 695598 0 - 115148730 C e panTro5.chr22 3803592 0 + 37823149 C a score=33.000000 s hg38.chrUn_KI270749v1 146955 10 + 158759 aaaaaaaaaa s nomLeu3.chr7b 695598 10 - 115148730 aaacgagtat i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004865 7035 + 13868332 I e gorGor5.CYUI01000689v1 14402 0 - 112215 C e panTro5.chr22 3803592 0 + 37823149 C a score=354116.000000 s hg38.chrUn_KI270749v1 146965 680 + 158759 aAGAAAAATGtggttaatacatacaaaattacagctggagagaaggaagaagttctagttctctacagcactgttgggtgactgtagttaatgggaatttattgtgtgttttcaaacaactaaaataaaagattttgaatattctcactgcaaagaaataatacatgatttagataatggatatgataatgactctgacttgatctttacgcattgcataaatatatcaaaatatcactctgtaacccataacatgtacatttattatatgtcaattaaaGTAAATTTAAAAGAGGAAAGATGAGGTAAAGGTAAATATACAGAATTTAATTGCTTTTTATTCTATAAAACCC--GAGTCAGTACCAAGAAGAGTCAATTTATTAGTTTTCTAAAATAAAAAAAAATCAAAATCACCAAAAAAGAGCAATATCCAAGAAAACATTGAAAATGAAACACAACATTTAGTAAGAATAGAAAACTTGGGCACTGTATCACCCTGTTCCTAGATACCGATTTACTGATGACCATTTAAATAGAATTTTATTCTATCTAATTCATTTATACTCCCAGAGTTCGAAATTACATTTTACCTACAAtaaatgagataacacttgtaaattatatggtactctgcctaacacacgttaataactcaatacatgttagcAATAAACTTTTAG s panTro5.chr22 3803592 682 + 37823149 aagaaaaatgtggttaatacatacaaaattacagctggagagaaggaagaagtcctagttctctacagcactgttgggtgactgtagttaatgggaatttattgtgtgttttcaaataactaaaataaaagattttgaatattctcactgcaaagagataatacatgatttaggtaatggatatgataatgactgtgacttgatctttatgcattgcataaatatatcaaaatatcactctgtaccccataacatgtacatttattataggtcaattaaaGTAAATTTAAAAGAGAAAAAATGAGGTAAAGGTAAATGTACAGAATTTAATTACTTTTTCTTCTATAAAACCCAAGAGTCAGTACCAAGAAGAGTCAATTTATTAGTTTTCTAAAATAAAAAAAAATCAAAGTCACCAAAAAAGAGCAATGTCCAAGAAAACATTGAAAATGAAACACAACATTTAGTAAGAATAGAAAACTTGGGCACTGTATCACCCTGTTCCTAGATACCGATTTACTGATGGCCATTTAAATAGAATTTTATTCTATCTAATTCATTTATACTCCCAGAGTTCGAAATTACATTTTGCCTAAAAtaaatgagataacacttgtaaattatatggtactctgcctaacacacgttaataactcaatacatgttagcAATAAACTTTTAG i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 14402 678 - 112215 aagaaaaatgtggttaatacatacaaaattacagctggagagaaggaagaagttctagttctctacagcactgttgggtgactgtagttaatgggaatttattgtgtgttttcaaataactaaaataaaagattttgaatattctcactgcaaagaaataatacatgatttaggtaatggatatgataatgactctgacttgatctttacgcattgcataaatatatcaaaatatcactctgtaccccataacatgtacatttattatatgtcagttaaaGTAAATTTAAAAGAGAAAAAATGAGGTAAAGGTAAATGTACAGAATTTAATTACTTTTTCTTCTATAAAACCC--GAGTCAGTACCAAGAAGAGTCAATTTATTAGTTTTCTAAAAT--AAAAAAATCAAAATCACCAAAAAAGAGCAATATCCAAGAAAACATTGAAAATGAAACACAACATTTAGTAAGAATAGAAAACTTGGGCACTGTATCACCCTGTTCCTAAATACCGATTTACTGATGGCCATTTAAATAGAATTTTACTCTATCTAATTCATTTATACTCCCAGAGTTTGAAATTACATTTTACCTACAAtaaatgagataacacttgtaaattatatggtactctgcctaacacacgttaatagctcaatacatgttagcAATAAACTTTTAG i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 695608 680 - 115148730 aagaaaaatgtggttaatatgtacaaaattacagctggagagaaggaagaagttctagttctctacagcactgttgggtgactgtagttatcgggaatttattgtgtgttttcaaataactaaaataaaagattttgaatattctcactgcaaagaaataatacatgatgtaggtaatggatatgataatgactctgacttgacctttacgcattgcataaatatatcaaaataccactctgtaccccataaaatgtacatctattatgtgtcaattaaaataaaTTTAAAAGAG-AAAAATGAGGTAAAGGTAAATGTACAGAATTTAATTACTTTTTCTTCTATAAAACCCAAGAGTCAGTACCAAGAAGAGTCAATTTATTAGTTTTCTAAAAT-AAAAAAAATAAAAATGACCAAAAAAGAGCAATATCCAAGAAAACGTTGAAAATGAAACACAACATTTAGTAAGAATAGAAAACTTGGGCACTGTATCACCCTGTTCCTAGATACTGATTTACTGACGGCCATTTAAATAGAATTTTATTCCATCTAATTCTTATATAATCCCAGAGTTCGAAATTACGTTTTACCCACAAtaaatgagataacacgtgtaaattatatggtactctccctaacacacgttaataactcaatacatgttagcAATAAACTTTTAG i nomLeu3.chr7b C 0 I 169 e ponAbe2.chr2a_random 9004865 7035 + 13868332 I a score=-90.000000 s hg38.chrUn_KI270749v1 147645 2 + 158759 TA----- s panTro5.chr22 3804274 7 + 37823149 TATAGTA i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 15080 7 - 112215 TATAGTA i gorGor5.CYUI01000689v1 C 0 C 0 e ponAbe2.chr2a_random 9004865 7035 + 13868332 I e nomLeu3.chr7b 696288 169 - 115148730 I a score=623694.000000 s hg38.chrUn_KI270749v1 147647 1233 + 158759 GTCAAAGTATTAATTTCTCACATTGCAATTTCCTTCAAAGACATGAATACAACCTTTCTAATGACTCCTTGTTCATCAAGATACCTCTTCAAATTATTCTATTTGTTTCATTCAGTATATTG------------TCTGTGCATACCGATAT-----TACACTCttttcttt---ttttgagatggaacctcattctgttactgatgctggaatgaggtggcatgatcttggttcactgcaacctctacctcccaggttcaagcgattctcctgtctcagccccccaggtagctaggactacaggtgcacaccaccatgcctggctaatttttgtatttttagtacagtcagagtttcaccctgttgtccaggctggactcgaactcctgacctcaggtgatccacccaccatggcctcccaaagtgctgggattacaggcataagccaccgcacccagccTGATATTGCACTCTTGGATTTTAAACACTGAATATCTTTTTGAAAGATTACACCTCTTTACCTCTTCGTGCTTCAGAAATTATTTTCCTTCAAGTGTTCTAAGAGTCTAATGAAGAATGAA-GTCATGTTTTATCACTTTTGTCCTTAAAGA----TTTCAGACATGCTGAAACTGATTGAAGTATCATCTGCTACCCGATAGATTAATTATCTCTAGTTGTAGGAGTGGATACATCTTTAATGGTATATTTTTGGTTATTGTCTTATTTTTGATGTAGTATTCTATCAATAATTTATTAAACCTGGCATCCTTGGGTGAGCATAGATTTTTCAACTTTGGTGTTATATTGTGTTTGCTTTTAAAAACTGCTTTTGAggccaggtatggtggcttttgcccata--tccagcactttgggaggccaaggtgggcggattacctcaggtcaggagttcaagaccagcctggtcaacatggcaaaaccatgtctctactaaaaacacaaaattagccaggcatggtggtgcatgcttgtagtcctaaccactcgagaggctgaggcaagagaatcacctgaacctgggaggaaaaagttgctaggttgctgtgaggcaaattcgcaccattgcactccagcctgggtgaaaagagcaaaactctgtctcaaaaaaaaaaaCCC--A------CCAAAAACTGCTTCTGAATGGAATTGTACATACAA-TTTTGATGAAAAAAATTATCAAGTGCATAAGTTCATAATAGAAAAACCAATAATACTCCAGGCACAAGTTAGTACTAAAAAAA s panTro5.chr22 3804281 1258 + 37823149 GTCAAAGTATTAATTTCTCACATTGCAGTTTCCTTCAAAGACATGAATACAACCTTTCTAATGACTCCTTGTTCAACAAGATACCTCTTCAAATTATTCTATTCGTTTCATTCAGTATACCGATATGATATTCATCTGTGTATACCGATATGATATTACACTCGtttttttattttttgagatggaatctcattctgttactgatgctggagtgaggtggcatgatctttgttcactgcaaactccacctcccaggttcaagcgattctcctgtctcagccccccaagtagctaggactacaggtgcacaccaccatgcctggctaatttttgtatttttagtacagtcagagtttcaccctgttgtccaggctggtctcgaactcctgacctcaggtgatccacccaccatggcctcccaaagtgctgggattacaggcataagccaccgcacccagccTGATATTGCACTCTTGAATTTTGAACACTGAATATCTTTTTGAAAGATTACACCTCTTTACCTCTTCGTGCTTCAGAAATTATTTTCCTTCAAGTGTTCTAAGAGTCTAATGAAGAATGAA-GTCATGTTTTATCACTTTTGTCCTTAAAGAAAGATTTCAGACATGCTGAAACTGATTGAAGTATCATTTGCTACCAGATAGATTAATTTTCTCTAGTTGTAGGAGTGGATACATCTTTAACGGTATACTTTGGGTTATTGTCTTATTTTTGATGCAGTATTCTATAAATAATTTATTAAACCTGGCATCCTTGGGTGAGCATGGATTTTTCAACTTTGGTGTTATATTGTGTTTGCTTTTAAAAACTGCTTTTGAggccgggtatggtggctcttgcccata--cccagcactttgggaggccaaggtgggcggattacctcaggtcaggagttcaagaccagcctggtcaacatggcaaaaccatgtctctactaaaaacacaaaattagccaggcatggtggtacatgcttatagtcctaaccactcaggaggctgaggcaagagaatcacctgaacctgggaggcaaaggttgctaggttgctgtgagccaagttcgcaccattgcactccagcctgggtgaaaagagcaaaactctgtctcaaaaaaaaaaCCCC-CA------CCAAAAACTGCTTTTGAATGGAGTCGTACATACAA-TCTTTATGAAAAAAATTATCAAGTGCATAAGTTCATAATAGAAAAACCAATAATACTCCAGGCACAAGTTAGTACTAAAAAAG i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 15087 1235 - 112215 GTCAAAGTATTAATTTCTCACATTGCAATTTCCTTCAAAGACATAAATACAACCTTTCTAATGACTCCTTGTTCATCAAGATACCTCTTCAAATTATTCTATTTGTTTCATTCAGTATATTA------------TCTGTGTATACCGATAT-----TACACTCttttcttt---ttttgagatggaatctcattctgttactgatgctggagtgaggtggcatgatctcggttcactgcaacctccacctcccaggttcaagcgattctcctgtctcagccccccaagtagctaggactacaggtgcacaccaccatgcctggctaatttttgtatttttagtacagtcagagtttcaccctgttgtccaggctggactcgaactcctgacctcaggtgatccacccaccatggcctcccaaagtgctgggattacaggcataagccaccgcacccagcATGATATTGCACTCTTGGATTTTGAACACTGAATATCTTTTTGAAAGATTACACCTCTTTACCTCTTCGTGCTTCAGAAATTATTTTCCTTCAAGTGTTCTAAGAGTCTAATGAAGAATGAA-GTCATGTTTTATCACTTTTGTCCTTAAAGA----TTTCAGACATGCTGAAACTGATTGAAGTATCATTTGCTACCAGATAGATTAGTTATCTCTAGTTGTAGGAGTGGGTACATCTTTAATGGTATATTTTGGGTTATTGTCTTATTTTTGATGTAGTATTCTATCAATAATTTATTAAACCTGGCATCCTTGGGTGAGCATGGATTTTTCAACTTTGGTGTTATATTGTGTTTGCTTTTAAAAACTGCTTTTGAggccaggtatggtggctcttgcccata--cccagcactttgggaggccaaggtgggcggattacctcaggtcaggagttcaagaccagcctggtcaacatggcaaaaccatgtctctactaaaaacacaaaattagccaggcatggtggtgcatgcttgtagtcctaaccactcgagaggctgaggcaagagaatcacctgaacctgggaggcaaaagttgctaggttgctgtgagccaaattcgcaccattgcactccagcctgg--tgaaagagcaaaactctgtctcaaaaaaaaaaaaaa--aaaaaacacaaaaaCTGCTTTTGAATGGA-TTGTACATACAA-TTTTGATGAAAAAAATTATCAAGTGCATAAGTTCATAATAGAAAAACCAATAATACTCCAGGCACAAGTTAGTACTAAAAAA- i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 696457 1231 - 115148730 GTCACAGTACTAATTCCTCACATTGCAATTTCCTTCAAAGACATGAATACAACCTTTCTAATGACCCCTTGTTCATCAAGATACCTCTTCAAATTATTCTATTTGTTTCATTCAGTATATTA------------TCTGTGTATACTGATAT-----TACACTCttttt------ttttgagatggaatgtcattctgtt----atgctgcagtgaggtggcatgatctccgttcactgcaacctccgcctcctgggttcaagcgattctcctgtctcagccccccaagtagctaggactacaggtgcacaccaccatgcctggctaatttttgtatttttaatagagtcagggtttcaccctcttggccaggctggtctcgaactcctgacctcaggtgatccacccaccatggcctcccaaagtgctgggattacaggcataagccaccgcacccagccTGATATTGCACTCTTGGATTTTGAGCACTGAATAACTTTTTGAAAGATTGCACCTCTTTACCTCTTTGTGCTCCAGAAATTATTTTCCTTCAAGTGTTGTAAGAGTCTAGTGAAGAATGAAGGTCATGTTTTATCACTTTTGTCCTTACAGA----TTTCAGACGTGCTGAAACTGATTGAAGTATCATTTGCTACCAGATAGATTAATTATCTCTAGTTGTAGGTGTGGATACATTTTTAATGGCATATTTTGGGTTATTGTCTTATTTTTGATGCAGTATTCTATAAATAATTTATTAAACCTGGCATCCTTGGGTGAGCATAGATTTTTCAACTTTGGTGTTATATTGTGTTTGCTTTTAAAAACTGCTTTTGAggccaggtatggtggctcttgccagtaatcccagcactttggaaggccatggtgggcggattacctcaggtcaggagttcaagaccagcctggtcaacatggcaaaaccacgtctctactgaaagcacaaaattagccaggcatggtggtgcatgcttgtagtcttaaccactcgggaggctgaggcaagagaatcacc-gaacctgggaggcgaaggttgctaggttgctgtgagccaagttcacaccattgcactcaagcctaggtgaaaagagcaaaactctgtcttgaaaaaaaaaaaTCCCA------CCAAAAACTGCTTTTGAATGGAGTTGTAAACACAATTTTTTGTGAAAAAAATTAGCAAGTGCATAAGTTGATAATAGAAAAACCAATAATATTCCAGGCACAAGTTAGTACTAAAAAAA i nomLeu3.chr7b I 169 C 0 e ponAbe2.chr2a_random 9004865 7035 + 13868332 I a score=-374.000000 s hg38.chrUn_KI270749v1 148880 1 + 158759 A s panTro5.chr22 3805539 1 + 37823149 T i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 16322 1 - 112215 T i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9011900 1 + 13868332 A i ponAbe2.chr2a_random I 7035 N 0 s nomLeu3.chr7b 697688 1 - 115148730 A i nomLeu3.chr7b C 0 C 0 a score=1135217.000000 s hg38.chrUn_KI270749v1 148881 2317 + 158759 -TATGTTGAATATTCTCTAATACAACATGCTTTTTCCCTTCATGAACAATTTGTGTTTTACTGAGAAGAGTCATTGTTTATGGTAGACATTAGACCACAGATGAATATGTACTTTAAACACTCTTAGTTACTTTCTTAATTTTATATCTGCTGCTTCATGCTTCTGTTTATTTTCATTCTTTCCAATGTCCACATTCTAGTAAATTTGAATATTTTAATCCAAGTTTATATACTATTTAATATTGCTTGTATAGTTTAGTATTGTGAAGACTCAAAAAGGTTTACAGAAAGAAGAAAA--AGATCAACATGTTATTAATCATTTAAAGATC-TTTTGAAATCTTTGACCTTTATATTTTAATGAATAAAATATTAGTAGTTATTAGTATAAAATAATTTATGTCTTTTGGACTTAGCATCCAGTATTTCTTTTTTAATAAAGAAAATAATTATTCTCTTGCAATATACTATGTTTATCTGGGTTTTGAAAAGTGCTGTTTCCTAATATGAGAAAGCCATTTACATTTTTAATTCTACAAAGGCAAATGGAATGGTACTAAATTATTTACATAATAATGTTTAGATGGTGGCCCTTATAACATTCTTTCTATACTTCCTACAGAGTTGCAGATATGCAATCATAGAATATTTCTGGGAGCTAATTCCTTTAGCTTGATGAATGAAACAAGACTTTTAAATAAAATTAAACTTTCAAATTATCCAGGTAATGGGCCTGTCTTTTAATTCAATGGATATGGAGCATAATGAATTATCCC-TGTGCATTGGGTAATAAGTTTTCATTCTT-----CTAATACTCAAAATGTCCTTTAA-TTTTTAAT-------AGTCATATCA------TTATCCCTAGGTATTTTAGCTTCTATCTTAAATTCTAAAATAATTTTGAAACAGGAGAAAGTATTCTTTATTACTATATGTATTAAACATCATGGTTTTCAAATTTAACTGCAAATGTATCTTTTCATTGCTTCTTGGTGACGCCCTTCACCCTATCCATATTGTCACTACCAAGTGGTGATTACTTTTCAGGTTCACATACTTATTCTTTAGAAAAATCT---CTGTGCCTTATAAAGAATATGATTGTTGGCATTCAAAAGCCAGCGAAGTATACATTATTAGCCTGTTGCCTAACTCATTTCTTTAAGAAACTACACTAATTACCCACATACTTATGTTTTTATTTCCTCATTATTTCTGGAGAAAACAAATACTGCTAACATGATATTTGTAAGAGAGAAAAAAGTCTTTTCTTGAAAAGTGCTGTCATTGTAGTACTAACTTATAGTATCAACTTCTTTATAAACTCCTTATACACTTTTTATTCTGAGAGAAATAAAAAAGCTAAAAGTGAAATGACTTTTTTAACTCTCCATATTATAAGCACCCATGTTGGTAATTTAGGGTCTTTATAGTTAGGGTAAGTTGTGTCATACCGAGATTACAAAATAAAAAGTATTTTGTCTCTTTGGGCCTTTCCTTATTCAGTAATACTGTCAGTTTGGCTTTTTTTGTAGGTCAACTTATTGATATCAGTATTCTGAAATAATATGTTTACTATTTTTTGATAAGCATTTAAAATATTAGATTTATTGTTACTCTTCTGCCTTCATTGGGCTGGAAGAATAATTGTTTCTC--ACTCCACAAAAGCCAAGTTGCAGAGAAAAACACATAGACATTCAACTGCAAAGCAGAGAAACTTGACTATTTCCTGCAATTTTAAAGTGTATATTGAATA-----AAACCATCTTTTTATTTTCTTTTTTGCTCACTGGCAAATATTAACAATATCAAGTGTGTTATTATAATGTTATCTAGTTAAAAATCTCAAAAAGTTTTCATAATTACCATTTAAAAATATATAAATAGGTGACCTAATGTTAATTTTTATTGTCTGAGACCAtgtctgttatttcactctttaaattcagttagtaatgcagaacctagcacttagta----ctcaaaaattatgtgctggataaaAAAAGGTTAAACATGTAATATATACAAAATGTACTGG-AAAAAATGCACCAAACAATTTTGTTATACCAGTTTAATGTAGAATATTGCCTTTAAAAGATAATATAGTTTTCAGGTGTCTACAGTGATTTTGTAATATTTGTGCACATATAAAATAATATTTCCAAAAATGTAATCCAGTGAGGAAATATACTCtctaaattctagatttataatttagggtttaaattataaaatcATTAAATAAGATACAAGTGAAATATAGTCAAATATCCCCTTGGAAAAAAATTAAGTGGCCTTTAAAGTGAGGTATTCATATATGTAATTTTACAATCCTC s panTro5.chr22 3805540 2333 + 37823149 -TATGTTGAATATTCTCTAATACAACATGCTTTTTCCCTTCATGAACAATTTGT--TTTACTGAGAAGAGTCATTGTTTATGGTAGAC-TTAGACTACAGATGAATATGTACTTTAAACACTCTTAGTTGCTTTCTTAATTTTATATCTGCTGCTTTATGCTTCTGTTTATTTTCATTCTTTCCAATGTCCACATTCTAGTAAATTTGAATATTTTAATCCAAGTTTATATACTATTTAATATTGCTTGTATAGTTTAGTATTTTTAAGACTCAAAAAGGTTTACAGAAAGAAGAAAA--AAATCAACATGTTATTAATCATTTAAAGATCATTTTAAAATTTTTGACCTTTATATTTTAATGAATAAAATATTAGTAGTTATTAGTATAAAATAATTTATGTCTTTTGGACTTAGCATCCAGTATTTCTTTTTTAATAAAGAAAATAATTATTCTCTTGCAATATACTACGTTTATCTGGGTTTTGAAAAGTGATGTTTCCTAATATGAGAAAGCCATTTACATTTTTAAATCTACAAAGGCAAATGGAATGGTACTAAATTATTTACATAATAATGTTTAGATGGTGGCCCTTATAACATTCTTTCTATACTTTCTACAGAGTTGGGGATATGCAGTCCTAGAATATTCCTGGGAGCTAAT-CCTTTAGCTTGATGAATGAAACAAGACTTTTAAATAAAATTAAACTTTCAAATTATCCAGGTGATGGGCCTGTCTTTTAATTCAATGGATATGGAGCATAATGAATTATCCCCTGTTCATTGGGTAAT--GTTATCATTCTTAACTTCTCATACTCAAAATGTCCTTTAA-TTTTTAATTTTTGATAGTCATATCA------TTATCCCTAGGTATTTTAGCTTCTATCTTAAATTCTAAAATAATTTTGAAACAGGAGAAAGTATTCTTTATTACTATATGTATTAAACATCATGGTTTTCAAATTTAACTGCAAATGTATCTTTTCATTGCTTCTTGATGACGCCCTTCACCCTATCCATATTGTCACTACCAAGTGGTGATTACTTTTCAGGTTCACATACTTATTCTTTAGAAAAATCTTCTCTGTGCCTTATAAAGAATATGATTGTTGGCATTCAAAAGCCAGCGAAGTATACATTATTAGCCTGTTGCCTAACTCATTTCTTTAAGAAACTACACTAATTACCCACATACTTATGTTTTTATTTCCTCATTATTTCTGGAGAAAACAAATACTGCTAACATGATATTTGTAAGAGAGAAAAAAGTCTTTTCTTGAAAAGTGCTGTCATTGTAGTACTAACTTATAGTATCAACTTCTTTATCAACTCCTTATACACTGTTTATTCTGACAGAAATAAAAAAGCTAAAAGTGAAATGACTTTTTTAACTCTCCATATTATAAGAACCCATCTTTGTAATTTAAGGTCTTTATAGTTAGGGTAAGTTGTGTCATACCTAGGTTACAAAATAAAAAGTATTTTGTCTCCTTGGGCCTTTCCTTATTCAGTAATACTGTCAGTTTGGCTTTTTTTGTAGGTCAACTTATTGATCTCAGTATTCTGAAATAATATGTTTACTATCTTTTGATAAGCATTTAAAATATTAGATTTATTGTTACTCTTATGCCTTCATTGGGCTGGAAGAATAATTGTTTCTCTCACTCCACAAAAGCCAAGTTGCAGAGAAAAACACATAGACATTCAACTGCAAAGCCGAGAAACTTGACTATTTCCTGCAATTTTAAAGTGTATATTGAATA-----AAACCATATTTTTATTTTCTTTTTTGCTCACTGGCAAATATTAACAATATCAAGTGTGTTATTATAATGTTACCTAGTTAAAAATCTCAAAAAGTTTTCATAATTACCATTTTAAAATATATAAATAGGTGACCTAATGTTAATTTTTATTGTCTGAGACCAtgtctgttatttcactctttaaattcagttagtaatgcagaacctagcacttagtagatacacaaaaattatttgctggataaaaaaaGGTTAAACATGTAATATACACAAAATGTACTGG-AAAAAATGCACCAAACAATTTTGTTATACCAGTTTAATGTAGAATATTGCCTTTAAAAGATAATATAGTTTTCAGGTGTCTACAGTGATTTTGTAATATTTGTGCACATATAAAATAATATTTCCAAAAATGTAATCCAGTGAGGAAATATACTttctaaattctagatttataatttagggtttaaattataaaatcATTAAATAAGACAAAAGGGAAATATAGT-AAATATCCCCTTGGAAAAAAATTAAGTGGCCTCTAAAGTGAGGTATTCATATATGTAATTTTACAATCCTC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 16323 2296 - 112215 -TATGTTGAATATGCTCTAATACAACATGCTTTTT-CCTTCATGAACAATTTGTGTTTTACTGAGAAGAGTCATTGTTTATGGTAGACATTAGAC-ACAGATGAATATGCACTTT-AACACTCTTAGTTGCTTTCTTAATTTTATATCTGCTGCTTTATGCTTCTGTTTATTTTCATTCTTTCCAATGTCCACATTCTAGTAAATTTG-ATATTTT-ATCCAAGTTTATATACTATTTAATATTGCTTGTATAG-TTAGTATTGTTAAGACTCAAAAAGGTTTACAGAAAGAAGAAAA--AGATCAACATGTTATTAATCATTTAAAGATCATTTTGAAATCTTTGACCTTTATATTTTAATGAATAAA--ATTAGTAGTTATTAGTATAAAATAATTTATGTCTTTTGGACTTAGCATCCAGTATTTC-TTTTTAATAAAGAAAATAATTATTCTCTTGCAATATACTATGTTTA-CTGGGTTTTGAAAAGTG-TGTTTCCTAATATGAGAAAGCCATTTACA-TTTTAAATCTACAAAGGCAAATGGAATGGTACTAAATTATTTACATAATAATGTTTAGATGGTGGCCCTTATAACATTCTTTCTATACTTCCTACAGAGTTGGGGATA-GCAATCCTAGAATATTCT--GGAGCTAAT-CCTTTAGCTTGATGAATGAAACAAGACTTTTAAAT-AAATTAAACTTTCAAATTATCCAGGTAAT-GGCCTGTCTTTTAATTCAATGGATATGGAGCATAATGAATTATCCC-TGTTCATTGGGTAATAAGTT-TCATTCTT----TTTAATACTCAAAATGTCCTTTAATTTTTTTAT-------AGTCATATCA------TTATCCCTAGGTATTTTAGCTTCTATCTTAAATTCTAAAATAA-TTTGAAACAGGAGAAAGTATT-TTTATTACTATATGTATTAAACATCATGGTTTTCAAATTTAACTGCAAATGTATCTTTTCATTGCTTCTTGGTGACGCCCTTCACCCTATCCATATTGTCACTACCAAGTGGTGATTACTTTTCAGGTTCACATACTTATTCTTTAGAAAAATCT--TCTGTGCCTTATAAAGAATATGATTGTTGGCATTCAAAAGCCAG-GAAATATACATTATTAGCCTGTTGCCTAACTCATTTCTTTAAGAAACTACACTAATTACCCACATACTTATGTTTTTATTTCCTCATTATTT-TGGAGAAAACAAATACTGCTAACATGATATTTGTAAGAGAGAAAAAAGTCTTTTCTTGAAAAGTGCTGTCATTGTAGTACTAACTTATAGTATCAACTTCTTTATCAACTCCTTATACACTTTTTATTCTGAGAGAAATAAAAAAGCTAAAAGTGAAATGACTTTTTTAACTCTCCATATTATAAGCACCCATCTTGGCAATTTAGGGTCTTTATAGTTAGGGTAAGTTGTGTCATACCGAG-TTACAAAATAAAAAGTATTTTGTCTCTTTGGGCCTTTCCTTATTCAGTAATACTGTCAGTTTGGCTTTTTTTGTAGGTCAACTTATTGA-ATCAGTATTCTGAAATAAT-TGTTTACTATCTTTTGATAAGCATTTAAAATATTAGATTTATTGTTACTCTTCTGCCTTCATTGGGCTGGAAGAATAATTGTTTC----ACTCCACAAAAGCCAAGTTGCAGAGAAAAACACATAGACATTCAACTGCAAAGCAGAGAAACTTGACTATTTTCTGCAATTTTAAAGTGTATATTGAATA-----AAACCATCTTTTTATTTTCTTTTTTGCTCACTGGCAAATATTAACAACATCAAGTGCGTTATTATAATGTTATCTAGTTAAAAATCTCAAAAAGTTTTCATAATTACCATTTAAAAATATATAAATAAGTGACCTAATGTTAATTTTTATTGTCTGAGACCAtgtctgttatttcactctttaaaatcagttagtaatgcagaacctagcacttagtagatactcaaaaattatttgctgaataaaAAAAGGTTAAACATGTAATATACACAAAATGTACTGG-AAAAAATGCACCAAACAATTTTGTTATACCAGTTTAATGTA-AATATTGCCTTTAAAAGATAATATAGTTTTCAGGTGTCTACAGTGATTTTGTAATATTTGTGCACATATAAAATAATATTTCCAAAAATGTAATCCAGTGGGGAAAtatactttctaacttctagatttataatttagggtttaaattataaAATCATTAAATAAGACACAAGTGAAATATAGTCAAATATCCCCTTGGAAAAAAATTAAGTGGCCTCTAAAGTGAGGTATTCATATATGTAATTTTACAATCCTC i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 697689 2312 - 115148730 TTATGTTGAATATTCTGTAATGCAACATGATTTTTCCCTTCATGAACAATTTGTGTTTTACTGAGAAGACTCACTGTTTATGGTAGACATTAGACTACAGATGAATATGTACTTTAAACACTCTTAGTTGCTTTCTTAATTTTATATCTGCTGCTTTATGCTTCTGTTTATTTTCATGCTTTCCAATGTCCGCATTCTAGTAAATTTGAATATTTTAATCCAGGTTTATATACTATTTAACATTGATTGTATAGTTTAGTATTTTTAAGACGCAAAAAGTTTTACAGAAAGAAGAAAAAGAGATCAACATGTTATTAATCATTTAAAGATCATTTTAATATCTTTGACCTTTATATTTTAATGAATAAAATGTTAGTAGTTATTAGTATAAAATAATTTATGTCTTTTGGACTTAGCCTCCAGCATTTATTTTTTAATAAAGAAAA----TATTCTATTGCAATATACTATGTTTATCTGGGTTTTGAAAAATGATGTTTCGTAATATGAGAAAGCCATTTACATTTTTCAATCTACAAAGGCAAATGGAATGATACCAAATTATTTCCATAATAATGTTTAGATGGTGGCCCTTATAATATTCTTTCTATACTTCCTACAGAGTTGGGGATATGCAATCCTAGAATATTTCTGGAAGCTAAT-CCTTTAGCTTGATGAATGAAACAAGACTTTTAAATAAAATTAAACTTTCAAATTATCCAGGTAATGGGCCTGTCTTTTAATTCAATGGATATGGAGCATAATGAATTATCCCCTGTTCATTGGGTAGTAAGTTCTCATTCTTAACCTATAATACTCAAAATGTCCTTTAA-TTTTTGAT-------AGTCATATCAGTATCCCTATCCCTAGGTATTTTAACTTCTATCTTAAATTCTAAAATAATGTTGAAATAGGAGGAATTATTCTTTGTTACCATATGTATTAAACATCATGGTTTTCAAATTTAACTGCAAATGTATCTTTTCA-------------------TTCACCCTACCCATATTGTCACTACCAAGTGGTGATTACTTTTCAGGTTCACATACTTGTTCTTTGGAAAAATAT---CTGTGCCTTATAAAGAATATGAGTGTTGGCATTCAAAAGCCAGTGAAGTATACATTATTAGCCTGTTGCCTAACTCATTTCTTTA--AAACTATACTAATTACCCCCATACTAATGTTTTTATTTCCTCATTATTTCTGGAGAAAACAAATACTACTAACATGATATTTGTAAGAGA-AAAAAAGTCTTTTCTTGAAAAGTGCTATCATTGTAGTATTAACTTATAGTATCAACTTCTTTATAAACTCCTTATACACTTTTTATTCTGAGGGAAATAAAAAAGCTAAAAGGGAAATGAGTTTTTCTACTCTCCATATTATAAGCACCCATCTTGGTAATTTAGGGTCTTTATAGTTAGGGTAAGTTGTGTCATACCGAGATTACAAAATAAAAAGTATTTTATCTGTTTCAGCCTTTCTTTATTCAGTAATACTGTCAGTTTGGCTTTTTTTGTAGGTCAACTTATTGATCTCAGTATTCTGAAATAATATGTATACTATCTTTTGATAAGCATTTAAAATTTTAGATTTATTGTTACTCTTCTGCCTGTAATGGGCTGGAAGAATAATTGTTTCTCTCACTCCACAAAAGCCAAGTTGCAGAGAAAAACACATAGACATTCAACTGCAAAGCAGAGAAACTTGACTCTTTTCTGCAATTTTAAAGTGTATATTGAATAAATTTAAACCATCCTTTTATTTCCTTTTTTGCTCACTGGCAAATATTAACAACATCAAGTGTGTTATTATAATGTTATCTAGTTAAAAATCTCAAAAAGTTTTCGTAGTTACCATTTTAAAATATATAAATAGGTGATCTAATGTTAATTTTTATTGTCTGAGACCATGTCTGTTATTTCACTCTTTAAATTCATTTAGTAATGCAGAACCTAGTACTTAGTAGATACTCAAAAATTATTTGCTGAAT-AAAAAAGGTTAAATATGTAAAATATACAAAATGTACTGGAAAAAAATGCATGAAACAATTTTGTTACAGCAGTTTAATGTAGAATATTGCCTTTGAAAGATATTACAGTTTTCAAGTGTCTACAGTGACTTTGTAATATTTGTGCACATATAAAATAATATTTCCAAAAATGTAATCCAGTGAGGGAATATACTTTCTACATTCTAGTTTTATAATTTGGGGTTTAAATTATAAAA----TAAATAAGATGCAAGTGAAATGTAGTCAAATATCCCCTTGG-AAAAAATTAAGTGGCCTCTAAAGTGACGTACTGATATATGTAATTTTACAATCATC i nomLeu3.chr7b C 0 N 0 a score=826421.000000 s hg38.chrUn_KI270749v1 151198 3160 + 158759 TAGTGATAGAATTAATTAAATATGCCACCAAATTGATTAATTCCTACAGTGTTAAAAGAGAAGCACTAACAATACCAGTGACCATGTAACATGGATTTAAGCTACAAGTCATAGAAATGTGACGAGAAGCCTCAGCGCTGTAAAACAGAGGGTGGAAGAAAGCTTTTCCTCTCTCAAATGAGCTTTGCGAGGTATACTTCTTGAAGGATAGGAAGTTGAAGTGTTCAGGACTTTTATGTCTATTCTACTTTGCCTTAGTTTACATGATTCTTAGTTTATTAGCCTAGAAATGGCCAAGAAAACTTAAGGCTCAATAATTAGTTATAAATATGAAATATCCCCAATTTTTAAGATAAAAACAACTTATAAATGTATTTGTCTGTAAAAATTGTGTATATTTTTATAGAACATCTATTTCT----TTTTTTCttttttaatttttttattatactttaaattctagggtacacatgcacaatgtgcaggtttgttgcatatgtatacatgtgctatgttggtgggctgcacccattaactcatcatttatattaggcatatctcctaatgctatccctcccccctccccccaccccacaacaggccctggtgtgtgatgttccccttcctgtgtccaagtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttttgtccttgcgatagtttgctgagaatgattgtttccagcttcatccatgtccatacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcatttttggacatttgtgttggttccaagtctttgctattgtgaatagtgccgcaataaacatacgtgtgcatgtgtctttatagcaacatgatttataatcctttgggtatatgcccagtactgggatggctgggtcaaatggtatttctagttctagatccctgaggaatggccacactgacttccacaatggttgaactagtttacagccccaccaacagtgtgaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggGTCTATTTCTTTAAAACAAAGGGAGGGGAGTCTCTCATTTACATTAGTTTTTTTCATAGCCTTTTGGACTTTGCAATTTCTATGTTTTGGAACCTATTTCTTACAGTTTTTCTATGCTAAACTCTGTCCTGGTCAGTTCCAGAGTGTATGAAGAACAAAATGATGTAATTGTATGTGACCTGGCTGTAGTGGAACAAATTTGACTCTTAAGTATGCAGGCTCTAATTTTCCTGTCTGGTTTTGGTAAGTATTCCTTACATAGGTTTTTTCTTTGAAAATCTGGGATTGAGAGGTTGATGAATGAAAATTAATCCTTTCACTTTGTTGTATATAAGTTTGCAATAATTAGGTCAGAGTGGAGTTTTAAGGTCATGAAGGAGGCTGATGACTTACAAATAATGGGCTCTGATTGGGCAACTACTCATCTGAGTTCCTTCCATTTGACCTAATTAAGCTTATGAAATTTACACTAAGCCATGAGCTCATCTTTAAAAAGTCTTATTAAAAGATTTTCAGCTGTTCCAAATGGGACTTATTAGTGGAATGTGTTTTAAAGGATCATATGTGATGAATGAAAGGTATTTGATCCTTTCTTTCCATAATAATAAAATGATGGTTTGGAAAAAGAGGCTACAGTCTAACCACAGTGCTATTATTAGGCTTTCTTGTTAAACATAGGTCTAAGCCTAAGTATGTCAATACAACAAATACTTACTGTTTCATTTCTAGTAATG-AAAAAAGaaaacaagtctttctggcataaggatgattttcatctggttattttgaaacatttttgtaaaataagtttacatctataaagaatattttcatttgtaaggaggggtatgtctctgtgcactggaagagagggaggactaaatcactgggaagtcttatgataaagaagccattggcttaaatcagcaaagcaagccatcccttggtttaaggtgtttttcctggccatcctttcttgactagaactttacctacacattcctttttggtttaggcaaattatagtatctaaacctgaagtctcagctctgtgtctttgagatAtaaatgttctaccatgtcttctctggaacctgataactatctatctctttaaaatgcaagtctagggagatgactcatcagaaaaagaagaaaa---aggtatttggaaattgtgcaaattaaaGCAGCCCATGATGCCAAAGTCTACACATTCCTGAGTGAGTCAGTTCTGGCCAGTTCTAGCTGGATCAAGAGAGCTCTGCTGGGCAGGCCTGAAGAGCAGCTGGATGGCAGACACCTGAGGAGCCAGGTGCCTGAAATTTCCTCCACCTGCTTGAGGAGCGCCAAAGCTCAGGTGCTGGCTAGACAACCCCTTCTGGCTGCCTAAGCAGGTGGAAGAGGAAGGAAAAAAGGTCAGAGGCAGAGTGTTGAACCCTGCCTCCCAGGTGGGTGGAAGATGCCTGTCGCCAAACTAGGGCCCAGCTTACCGGGTGAGATGGGTGAACTGGTGATCTCCCGAGAGAGTGGACGTCAGAACTACATGGTCCTGGACTTCACCTAGGCCAGTGAAGGAGAGAGAGGATTAATGTTAACTGCAGGAGGCCCACTCTAGCCTTAAATTTTGTAATTCAAACCCTTTCCTTGGAGACAAAACAAACATGACAAGGAATTCTGAGGTCAGGGGACAAGAATCACAAGTTCCCCAGTGGGAGACTGAGGAGGCAGTGTCCTTTCTGCCCTTGGTCTACTGGCTAAGAACCTTCCTCAGCCTGACCTTTCCACATTGCACTTTCAGCTCTGTTTGCAATTTTCCTCCTGAGGGATTCCTGCTGAGGGAATCCCAGTGTTCGATACTGAAATCTATACGTTCCTAATGGGTGGTTAAAAAAAAACCTCAGCAAGAGAAGCAGAAAATGTTTCCTCTTCCTGAAAAACTGTAGAAAGGCAGGCACCATTCTGGGTG-GGACATGGTCCTTGCAAAA s panTro5.chr22 3807873 3149 + 37823149 TAGTGATAGAATTAATTAAATACACCACCAAATTGATTAATTCCTCCAGTGTTAAAAGAAAAGCACTAATAATGCCAGAGACCATGTAACATGGATTTAAGCTACAAGTCATAGAAACGTGATAAGAAGCCTCAGCGCTGTAAAACAGAGGGTGGAGGAAAGCTTTTCCTCTCTCAAATGAGCTTTGCGAGGTATACTTCTTGAAGAATAGGAAGTTGAAGTGTTCAGGACTTTTATGTCTATTCTACTTTGGCTTAGTTTACATGATTCTTAGTGTATTAGCCTAGAAATGGCCAAGAAAACTTAAGGCTCAATAATTAGTTATAAATATGAAATATCCCCAGTTTTTAAGATAAAAACAACTTATAAATGTATTTGCCTGTAAAAATTGTGTATATTTTTACAGAACATCTATTTCTCTCTTTTTTTAttttttatactttttattatactttaaattctagggtacacaagcacaatgtgcaggtttgttgcatatgtatacatgtgccatgttggtgtgctgcacccattaactcatcatttatattaggcatatctcctaatgctatccctcccccctccccccaccccacaacaggccctggtgtgtgatgttccccttcctgtgtccaagtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggtttttcgtccttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcattttttatggatgcatagtattccgtggtgtatatgtgccacattttcttaatccagtctatcatttttggacatttgggttggttccaagtctttgctattgtgaatagtgccacaataaacatacgtgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtagtgggatggctgggtcaaatggtgtttctagttctagatccctaaggaatggccacactgtcttccacaatggttgaactagtttacagtcccaccaacagtgtgaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttt-aatgattgccattctaactggt----------atctcattgtggttttgatttgcatttctctgatggGTCTATTTATTTAAAACAAAGGGAGGGGAGTCTC--ATTTACATTAGTTTTTTTCATATCCTTTTGAACTTTGCAATTTCTATGTTTCAGAACCTATTTCTTACAGTTTTTCTATGCTAAACTCTGTCCTGGTCAGTTCTAGAGTGTATGAAGAACCAAATGATGTAATTGTATGCCACCTGGCTGTAGTGGAACAAATTTGACTCTTAAGTATGCAGGCTCTAATTTTCCTGTCTGGTTTTGGTAAGTATTCCTTACATAGGTTTTTTCTTTGAAAATCTGGGATTGAGCGGTTGATGAATGAAAATTAATCCTTTCACTTTGTTGTGTATAGGTTTGCAATAATTAGGCCAGAGTGGAGTTTTAAGGTCATGGAGGGGGCTGATGACTTGCAAATAATGGGCTCTGATTGGGCAACTACTCATCTGAGTTCCTTCCATTTGACCTAATTAAGCTTGTGAAATTTACAGTAAGCCATGAGCTCATCTTTAAAAAGTTTTATTAAAAGATTTTCAGCTGTTCCAAATGGGACTTATTAGTGGAATGTGTTTTAAAGGATCATATCAGATGAATGAAAGGTATTTGATCCTTTGTTTCCTTAATAATAAAATGATGGTTTGAAAAAATAGGCTAGAGTCTAACCACAGTGCTATTATTAGGCTTTCTTGTTAAACATAGGTCTAAGCCTATGTATGTCAATACAACCAATACTTACTGTTTCATTTCTAGTAATGAAAAAAAAaaaagaagtctttctggcataaggatgattttcatctggttattttgaaacatttttgtaaaataaatttccttctataaagaacatttttatttgtaaggaggggtatgtctctgtgcactggaagagagggaggactagatcactggcaagtcttatgataaagaagccattggcttaaatcagcaaagcaagccgtcccttggtttaaggtgtttttcctggccatcctgtcttgactagaactttacctacaccttcctttttggtttaggcaaattatagtatctaaacctgaagtctcggctctgtgtttttgagatACAaatgttctaccatgtcttctctggaacctgataactatctatctctttaaaatgcaagtctagggagatgactcatcagaaaaagaagaaaaaagaggtatttggaaattgtgcaaattaaaGCAGCCCCTGATGCCAAAGTCTACACATTCCTGAGTGAATCAGTTCTGGCCAGTTCTAGCTGGATCAAGACAGCTCTGCTGGGCAGGCCTGAAGAGCAGCTGGATGGCAGACACCTGAGGAGCCAGGTGCCTGAAACTTCCTCCACCTGCTTGAGGAGCACCAAAACCCAGGTGCTGGCTGGACAACCCCTAGTGGCTGCCTAAGCAGGTGGCAGAAGAAGGAAACAAGGTCAGAGGCAGAGTGTTGAACCCTGCCTCCCAGGTGGGTGGAAGATGCCTGTCGCCAAACTAGGGCCCAGCTTGCCAGGTGAGGTGGGTGAACTGGTGATCCCCCGAGAGAGTGGACGTCAGAACTACATGTTCCCGGACTTCACCTCGGCCAGCGAAGGAGAGAGAGGGTTAATGTTAACTGCAGAAGGCCCACTCTAGCCTTAAATTCTGAAATTCAAACCATTCCCTTGGAGACAAAACAAACATGACAAGGAATTCTGAGGTCAGGGGACAAGAATCACAAGTTCCCTAGTGGGAGACTGAGGAGGCAGTGTCCTTCCTGCCCTTGGTCTACTGGCTAAGAACCTTCCTCAGCCTGACCTTTCCACATTGCACTTTCAGCTCTGTTTGCAATTTTCCTCCT------TTAGTGCTGAGGGAATCCCAGTGTTCGATTCTGAAATCTGTATGTTCCTAATGGGTGGTT-AAAAAAAACCTCAGCAAGAGAAGCAGAAAATGTTTCCTCTTCCTGAAAAACTGTAGAAAGGCAGGCACCATTCCGGGTGAGGACATGGTCCTTGCAAAT i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 18619 3141 - 112215 TAGTGATAGAATTAATTAAATATGCCACCAAATTGATTAATTCCTACAGTGTTAAAAGAGAAGCACTAACAAT-CCAGTGACCATGTAACATGGATTTAAGCTACAAGTCATAGAAATGTGATGAGAAGCCTCAGC-CTGTAAAACCGAGGGTGGAGGAAAGCTTTTCCTCTCTCAAATGAGCTTTGCGAGGTATACTTCTTGAAGGATAGGAAGTTGAAGTGTTCAGGACTTTTATGTCTATTCTACTTTGGCTTAGTTTACATGATTCTTAGTTTATTAGCCTAGAAATGGCCAAGAAAACTTAAGGCTCAATAATTAGTTATAAATATGAAATATCCCCAATTTTTAAGATAAAAACAACTTATAAATGTATTTGTCTGTAAAAATTGTGTATATTTTTACAGGACATCTATTTCT---Ttttttttttttttatatatttttttatactttaaattctagggtacacatgaacaatgtgcaggtttgttgcatatgtatacatgtgccatgttggtgtgctgc-cccattaactcatcatttatattaggcatatctcctaatgctatctctccccc--tcccccaccccacaacaggccctggtgtgtgatgttccccttcctgtgtccaagtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttttgtccttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctagaaaggacatgaactcatcattttttatggacgcatagtattccatggtgtatatgtgctacgttttcttaatccagtctatcatttttgaacatttgggttggttccaagtctttgctattgtgaatagtgccgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtagtgggatggctgggtcaaatggtatttctagttctagatccctgaggaatggccacactgacttccacaatggttgaactagtttacagtcccaccaacagtgtgaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggGTCTATTTCTTTAAAACAAAGGGAGGGGAGTCTCTCATTTACATTAGTTTTTTTCATAGCCTTTTGGACTTTGCAATTTCTATGTTTTGGAACCTATTTCTTACAGTTTTTCTATGCTAAACTCTGTCCTGGTCAGTTCCAGAGTGTATGAAGAACCAAATCATGTAATTGTATGTGACCTGGCTGTAGTGGAACAAATTTGACTCTTAAGTATGCAGGCTCTAATTTTCCTGTCTGGTTTTGGTAAGTATTCCTTACATAGGTTTTTTCTTTGAAAATCTGGGATTGAGAGGTTGATGAATGAAAATTAATCCTTTCACTTTGTTGTATATAGGTTTGCAATATTTAGGTCAGAGTGGAGTTTTAAGGTCATGAAGGGGGCTGATGACTTACAAATAATGGGCTCTGATTGGGCAACTACTCATCTGAGTTCCTTCCATTTGACCTAATTAAGCTTGTGAAATTTACACTAAGCCATGAGCTCATCTTTAAAAAGTTTTATTAAAAGATTTTCAGCTGTTCCAAATGGGACTTATTAGTGGAATGTGTTTTAAAGGATCATATCAGATGAATGAAAGGTATTTGATCCTTTCTTTCCTTAATAATAAAATGATGGTTTGGAAAAATAGGCTACAGTCTAACCACAGTGCTATTATTAGGCTTTCTTGTTAAACATAGGTCTAAGCCTAAGTATGTCAATACAACAAATACTTACTGTTTCATTTCTAGTAATA-AAAAAA------AAGTCTTTCTGGCATAAGGATGATTTTAATCTGGTTATTTTGAAACATttttgtaaaataaatttacatctataaagaacatttttatttgtaaggaggggtatgtctctgtgcactggaagagagggaggactaaatcactgggaagtcttatgataaagaagccattggcttaaatcagcaaagcaagccatcccttggtttaaggtgtttttcctggccatcctgtcttgactagaactttacctacaccttcctttttggtttaggcaaattatagtatctaaacctgaagtctcagctctgtgtctttgagatATAAATGTTCTACCACGTGTTCTCTGGAACctgataactatctatctctttaaaatgcaagtctagggagatgactcatcagaaaaagaagaaaaa--aggtatttggaaattgtgcaaattaaaGCAGCCC-TGATGCCAAAGTCTACACATTCCTGAGTGAGTCAGTTCTGGCCAGTTCTAGCTGGGTCAAGAGAGCTCTGCTGGGCAGGCCTGAAGAGCAGCTGGATGGCAGACACCTGAGGAGCCAGGTGCCTGAAACTTCCTCCACCTGCTTGAGGAGCACCAAAGCCCAGGTGCTGGCTGGACAACCCCTTCTGGCTGCCTAAGCCGGTGGCAGAGGAAGGAAAAAAGGTCAGAGGCAGAGTGTTGAACCCTGCCTCCCAGGTGGGTGGAAGATGCCTGTTGCCAAACTAGGGCCCAGCTTGCCGGGTGAGGTGGGTGAACTGGTGATC-CCCGAGAGAGCGGACGTCAGAACTACATGGTCCCAGACTTCACCTCGGCCAGTGAAGGAGAGAGAGGGTTAATGTTAACTGCAGGAGGCCCACTCTAGCCTTAAATTCTGTAATTCAAACCCTTCCCTTGGAGAC-AAACAAACATAACAAGGAATTCTGAGGTCAGGGGACAAGAATCACAAGTTCCCTAGTGGGAGACTGAGGAGGCAGTGTCCTTTCTGCCCTTGGTCTACTGGCTAAGAACCTTCCTCAGCCTGACCTTTCCACATTGCACTTTCAGCTCTGTTTGCAATTTTCCTCCT------TTAGTGCTGAGGGAATCCCAGTGTTCGATCCTGAAATCTATACGTTCCTAATGGGTGGTT-AAAAAAAACCTCAGCAAGAGAAGCAGAAAATGTTTCCTCTTCCTGAAAAACTGTAGAAAGGCAGGCAACATTCTGGGTG-GGACATGGTCCTTGCAAAA i gorGor5.CYUI01000689v1 C 0 C 0 a score=3806.000000 s hg38.chrUn_KI270749v1 154358 9 + 158759 GTCTTTATG s panTro5.chr22 3811022 9 + 37823149 GTCTTTGTG i panTro5.chr22 C 0 I 5 s gorGor5.CYUI01000689v1 21760 9 - 112215 GTCTTTATG i gorGor5.CYUI01000689v1 C 0 I 2 s macFas5.chr11 27964539 9 + 137757926 gtttttttg i macFas5.chr11 N 0 C 0 a score=1243.000000 s hg38.chrUn_KI270749v1 154367 5 + 158759 -ttttt s panTro5.chr22 3811036 5 + 37823149 -ttttg i panTro5.chr22 I 5 C 0 s panPan2.chr12 73671459 5 - 135337776 -ttttt i panPan2.chr12 N 0 C 0 s gorGor5.CYUI01000689v1 21771 5 - 112215 -ttttt i gorGor5.CYUI01000689v1 I 2 C 0 s macFas5.chr11 27964548 5 + 137757926 gcttt- i macFas5.chr11 C 0 C 0 a score=311246.000000 s hg38.chrUn_KI270749v1 154372 284 + 158759 ttttttattttgagatgaagttttgctcttgttgcccagactggagtgcagtggtgtaatctctgctcactgcaacctctgcctcctgggttcaagcaattctcctacctcagcctcccgagtagctggaattacaggcacctgccaccatacctggctaattttttgtatttttagtagagatggagttttgccatgttggccatgttggcctcgaactcctgacctcaagtg-agccacccgcttctgcctcccaaagtgctgggattacaggcgtgagtcac s panTro5.chr22 3811041 284 + 37823149 tttttttttttgagatgaagttttgctcttgttgcccagactggagtgcagtggtgtgatctctgctcattgcaacctccgcttcctgggttcaagcaattctcctacctcagcctcctgagtagctggaattacaggcacctgacagcacacctggctaattttttgtatttttaatagagatggggttttgccatgttggccatgttggtctcgaactcctgacctcaagtg-agccacccgcttctgcctcccaaagtgctgggattacaggagtgagccac i panTro5.chr22 C 0 N 0 s panPan2.chr12 73671464 274 - 135337776 tttttttttttgagatagagtcttactc-tgttgcccaggctggaatgcagtggtgggatcccagctcactgcaatctcagcctcccgggttcaagcgattctcccatctcagcctcccgagtagctgggattacaggcgtgcaccaccatgcctggctaa-tttttgtatttttggtagagatggggtttctccacattggccaggctagtct--------tgacctcaggtg-acccacccacctgggcctcccaaagtgctgggattacaggcgtaagtcac i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 21776 284 - 112215 ttttttattttgagatgaagttttgctcttgttgccccggctggagtgcagtggtgtgatctctgctcactgcaagctctgcctcctgggttcaagaaattctcctacctcagcctcccgagtagctggaattacaggcacctgccaccatacctggctaattttttgtatttttagtagagatggagttttgccatgttggccatgttggtctcgagctcctgacctcaagtg-agccacccgcttctgcctcccaaagtactgggattacaggcgtgagtcac i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr23 26467975 283 - 34552619 ttttttttttttagatagagtcttactc-tgttgcccaggctggaacgcagtagtgggatcccagctcactgcaatctcagcctgccgggttcaagtgattctcccatctcagcctcccgagtagctgggattacaggcatgcaccaccacgcctgactaa-tttttgtatttttagtagagatggggtttcgccacgttgaccagactggtctcgaactcttgacctcaggttcacccacccgcctcagcctcccaaagtgctgggattacaggcttgagtcac i nomLeu3.chr23 N 0 C 0 s macFas5.chr11 27964553 282 + 137757926 tttttttttttgagatagtgtcttactc-tgttgccgacgctggaacgcaatggtgggattccagctcactgcaacctctgcctcccaggttcaagcgattctcccatctcagcctcccgagtagctgggattacaggcatgtaccaccacacctggctaa-tttttgtatttttagtagagatggggttttgccacattggccaggctggtctcgagctcctgacctcaggtg-acccgcccacctccgcctcccaaagttctgggattacaggcgtgagtcac i macFas5.chr11 C 0 C 0 a score=111320.000000 s hg38.chrUn_KI270749v1 154656 139 + 158759 tgtgcccggccAAGATTTTGTTTTGATAGAACACTT-GAGTCTCTCTCACCTTGTATTTAGAGAAGTTAGAAAGTAAAagataatgtatatagaaagctttttgaaaactcttaagaagttcataaatatggggcactat s panPan2.chr12 73671738 138 - 135337776 tgtgcccagccAAGATT--GTTTTGATAGAACACTTTGTGTCTCTCTCACCTTGTATTTAGAAAAGTTAGAAAATAAAGGATAATGTATATAGAAAGCTTTTTGAAGACTCTTAAGAAGTTCATAAATATGGGGCACTAC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 22060 138 - 112215 tgtgcccggccAAGATTCTGTTTTGATAGAACACTT-GTGTCTCTCTCACCTTGTATTTAGAAAGGTTAGAAAGTAAAGGATAATGTATATAGAAAGCTTTTTGAAGACTCTTAAGAAGTTCATAAATAT-GGGCACTAT i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr23 26468258 138 - 34552619 tgtgcccggccAAGACT--GTTTTGATAGAACACTTAGTGTCTCTCTCACCTTGTATTTAGAAAAGTTAGAAAGTAAAGGATAATGTATACAGAAAGCTTTTTGAAGACTCTTAAGAAGTTCATAAATATGGGGCACTAC i nomLeu3.chr23 C 0 C 0 s macFas5.chr11 27964835 137 + 137757926 tgtgcctggccAAGACTCTGTTTTGATAGAACACTTTGTGTCTCTCTCACCTTGTATTTAGAAAAGTTAGAAAGTAAAGGATCATGTATATAGAAAGCTTTTTGAAGACTCTT---AAGTTCATAAATATGGGGCACTAC i macFas5.chr11 C 0 C 0 a score=1500.000000 s hg38.chrUn_KI270749v1 154795 1 + 158759 g s panPan2.chr12 73671876 1 - 135337776 G i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 22198 1 - 112215 G i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chrUn 6599337 1 - 72422247 G i ponAbe2.chrUn N 0 I 3207 s nomLeu3.chr23 26468396 1 - 34552619 G i nomLeu3.chr23 C 0 C 0 s macFas5.chr11 27964972 1 + 137757926 G i macFas5.chr11 C 0 C 0 a score=1744214.000000 s hg38.chrUn_KI270749v1 154796 2074 + 158759 actatGCATATGAAAATATTTCCTATCAGTTGGCAGTTACCACCTCTTATAGTGGCATGGAACCTCTTGAGTTAAACCAAGACTCAGTGAGATTGGGTGATTTAGGTAGTGTCATTTTATGAACAAGGGGTACCCTACTCAGTTCTTTTATTTTATTATACTTCTCTTTGACATTCACTCCAGTGAAAGAACTCTTTCAAAAGACATCATGCCTGGTCTCACAGAGATTCAAAGGTGTTTGAGTCCTTCCTTATTATGCCCTTGGAAGATGCTTTGAGGACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGAATAGGGCACCTCATCACTCTGGTGTTATCCCTGAAGGGCCTTCATAATAATGTGCTTAAAAGAGTCCCCTATTATGTCCTTCAGGATGGAGCTT-GACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGGAACTGAAGTTGGTCATTTCTCACTGGAtcagtcaacaaggtttgagtactttctgtgtgctctgcatcattctgagtac----------agaataaggcatggctcctgccttcaaggagtatggaatttaatagaagatgacaACATACATGATTGTAAATCTATCTACATGAGAGTGAATAATTGTGAGATTCCTAATAAACGGCAAGATATGTTCTGAAAATGTGAAACATAAATGAGGTTGAAGAAATTGTGAAAGGTTTAGCAGAGGAGGAATAATTCGTCAGGTTCTTTAAATACAAGTAAAGGGGAAAGGAAGGACCATTTTTAAGTTTAGATATTCCAAGGGTTAGTGGTGAGGTGGATTATGGTATGTCTTCTCGTTGATGAGGGTGGAGACTGGCGAATAGTGGAAAATAAAGTTAAATAGTTAGGGTGGGGCCAAATTATGGGTTTTAATAAAAGCCAGGCATAGAAATTTAGATTGGGGTGGTAGAAAAATGAAGGCTTTAAACGTTTTTAAGCCAATGAATGACATCATACAAGTTCTATATAAAGAGCAGTGATTTCAGGATGGGAGAGAATGGCATCAGGAAGACCCACTTGAATGCTGGTAACTAATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGATATGCTGATGGAAGTGAGAATGAAGAATAAGGTGGGATGAAAGAGA-TTTTGAC-AAGAGTTTTTTAATGAACCTGAAAC-GGGAAAGGGCGAGATTGACTAAGCCTGCT------------------------------TGCCATGGACAGCAATGGGGTTGCTAGAAGATTAGCTGTGCGGAAAAA-GTTATGCATTTACCTTTGAGCATAATGAAATGcaattgactctccatattcatgggttctgcatccaccaattcaaacaactgtggaacaaaattgtcagaaaaaacaatacaatgataaaaaatgatacaaataaaaaacaacatggtataccaactatttacatagcatttacatcgtattaagtgttattaagtaatctagagattatttaaagtatataggaggatgtgtgtaggttatatgcaaatactacactattttataccagtaacttgagcatccatggattttggtatacaagggggatcctggaacaaattcgccatgcatatcaaaggatgactgTATGAGTTATCTGTAAAA---TGGTTTGGTTGAAATGTTTAGAAAACAGCTAGAAATACAAGACTGGCTGTTGGATGAAAAAAACATAGGACTAGGAAATTCAGGTATGCTAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGAGCTCTCTGTGAGTTCCAAGACAGATGCAAGGACTGGCATTCATGCACAGCTTCTAGCAGTTAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAATTTTTCTCCTGGTGATAAAAGGCATGTAAGGCTATTTTAGgaaattgaaaaatgcaaaaaggtataaagaaaaagaaaaGATAATCATTAATAGTACGTTAGTAAACAAGATTTGACTAAAGATATCACTTTCCTCCCGCTTGTTTTCTTATGCATATAAAGGGATAGGAAAtatgtatgtatgtatgtat s panPan2.chr12 73671877 2058 - 135337776 ACTATGCATATGAAAATATTTCCTATCAGTTGGCAGTTATCACCTCTTACAGTGGCATGAAACCTCTTGAGTTAAACCAAGGCTCAGTGAGATTTGGTGATTTAGGTAGTATCATGTTATGAACAAG------------CAGGTCTTTTATTTTATTATACTTCTCTTTGACATTCACTCCAGTTAAAGAACTCTTTCAAAAGACCTCATGCCTGGTCTCATGGAGATTGAAAGGTGTTTGAGTCCTTCCTTATTATCCCCTTGGAAGATGCTTTGAGGACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGTATAGGGCACCTCATCACTCTGGTGTTATCCCTAAAGGGCCTTCATCATAATGTGCTTAAA-GAGTCCCCTATTATGTCCTTTAGGATGGAGCTTTGACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGGAACTGAAGTTGGTCATTTCtcactggatcagtcaacaagatttgagtactttctgtgtgctctgcatcattctgagtactttgggggacagaataaggcgtggctcctgccttcaaggagtatggaatttaatagaagatgacaacatacatgactgtaaatctgtctacgtgagagtgcctaattgtgagattcctaataaatggcaagacatgttctgaaaacgtgaaacataaatgaggctgaagaaattgtgaaaagtttagcagaggaggaatagttcgtcaggttctttaaatacaagtaaaggggaaaggaaggaccatttttaagtttagatattccaagggttagtggtgaggttgattatggtatgtcttctcgttgatgagggaggagactggtgaatagtggaaaataaagttaaatggctagggtggggccaaattatggGCTTTAATAAAAGCCAGGCATAGAAATTTAGATTGGGATGGTAGAAAAAGGAAAGCTTTAAAAGTTTTTGAGCCAATGAATGACATCATACAAGTTCTAT-----GAGCAATGATTTCAGGATGGGAGAGAATGGCATCAGGAAGACCCACTTGAATGCTGGTAAGTAATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGATATGCTGATGGAAGTGAGAATGAAGAATAAGGTGGGATGAAAGAGA-TTTTGA--AAGAGGTTTTAAA-GAACCTGAAAT-GGGAATGGGAGAGATTAACTAAGCCTGCt------------------------------tgccatggacagcaatggggttgctagaagattagctgtgaggaaaaa-gttatgcatttacctttgggcataattaaatgcaattgactctccatattcatgggttctgcatccactgattcaaacagctgtggaacaaaattgtcagaaaaaacaatacaacaataaaaaatgatacaaataaaaaacaacatggtataccaactat----gtagcatttacatcatattaagtattag-aagtaatctagagatgatttaaagtatataggaggatgtgtgtaggttatatgccaatactacactattttataccagtaacttgagcatccatggattttggtatacaaggggt-tcctggaaccaatttcccatgcatatcaaaggatgactgtatgagttatctgtaaaaaaatgttttggttgaaatgtttagaaaacagctaga----caagactggCTGTTGGATGACAAAAACATAGGACTAGGAAATTCAGGTATGCTACTCTTTTTGAGTATTGTTTAAAGCCATAGGAAAAGAGCTCTCTGTGAGTTCCAAGGCAGATGCAAGGACTGGCATTCATGCACAGCTTCTAATAGATAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctgttttaggaaattgaaaaatgcaaaaaggtatgaagaaaaagaaaagataatcattaatagtactttagtaaacaagatttgactaaagatatggctttccttccgcttgttttcttatgcatataaagggataggaaatatgtatgtgtgtatgtgt i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 22199 2081 - 112215 ACTATGCATATGAAAATATTTCCTATCAGTTGGCAGTTACCACCTCTTATAGTGGCATGGAACCTCTTGAGTTAAACCAAGGCTCAGTGAGATTTGGTGATTTAGGTAGTGTCATTTTATGAACAAGGGGGACCCTACTCAGGTCTTTTATTTTATTATACTTCTCTTTGACATTCACTCCAGTTAAAGAACTCTTTCAAAAGACCTCATGCCTGGTCTCACGGAGATTCAAAGGTGTTTGAGTCCTTCCTTATTATGCCCTTGGAAGATGCTTTGAGGACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGTATAGGGCACCTCATCACTCTGGTGTTATCCCTGAAGGGCCTTCATAATAATGTGCTTAAA-GAGTCCCCTGTTATGTCCTTCAGGATGGAGCTT-GACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGGAACTGAAGTTGGTCATTTCtcactggatcagtcaacaagatttgagtactttctgtgtgctctgcatcattctgagtactctgggggacagaataaggcatggctcctgccttcaaggagtatggaatttaatagaagatgacaacatacatgattgtaaatctatctacatgagagtgcctaattgtgagattcctaataaacggcaagatatgttctgaaaatctgaaacataaatgaggttgaagaaattgtgaaaagtttagcagaggaggAATAATTCGTCAGGTTCTTTAAACACAAGTAAAGGGGAAAGGAAGGACCATTTTTAAGTTTAGATATTCCAAGCGTTAGTGGTGAGGTTGATTATGGTATGTCTTCTCGTTGATGAGGGAGGAGActggtgaatagtggaaaataaagttaaatagctagggtggggccaaattctggGTTTTAATAAAAGCCAGGCATAGAAATTTAGATTGGGGTGGTAGAAAAAGGAAGGCTTTAAAAGTTTTTGAGCCAATGAATGACATCATACAAGTTCTATATAAAGAGCAGTGATTTCAGGATGGGAGAGAATGGCATCAGGAAGACCCACTTGAATGCTGGTAAGTAATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGATATGCTGATGGAAGTGAGAATGAAGAATAAGGTGGGATGAAAGAGA-TTTTGAC-AAGAGTTTTTTAATGAACCTGAAA--GGGAAAGGGCGAGATTAACTAAGCCTGTT------------------------------TGCCATGGACAGCAATGGGGTTGCTAGAAGATTAGCTGTGCGGAAAAA--TTATGCATTTACCTTTGGGCATAATAAAATGcaattgactctccatattcatgggttctgcatccactgattcaaacaactgtggaacaaaattgtcagaaaaaacaatacaatgataaaaaatgatacaaataaaaaacaacatggtataccaactatttacatagcatttacatcgtattaattgttattaagtaatctagagatgatttaaagtatataggaggatgtgtgtaggttatatgcaaatactacactattttataccagtaacttgagcatccatggattttggtatacaagggggatcctggaaccaattccccatgcatatcaaaggatgactgTATGAGTTATCTGTAAAA---TGGTTTGGTTGAAATGTTTAGAAAACAGCTAGAAATACAAGACTGGCTGTTGGATGAAAAAAACATAGGACTAGGAAATTCAGGTATGCTAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGAGCTCTCTGTGAGTTCCAAGACAGATGCAAGGACTGGCATTCATGCACAGCTTCTAACAGATAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctattttaggaaattgaaaaatgcaaaagggtataaagaaaaagaaaagataatcattaatagtacgttagtaaacaagatttgactaaagatatgactttcctcccgcttgttttcttatgcatataaagggataggaaatatgtatgtatgtatgtgt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr23 26468397 2063 - 34552619 ACTATGCATATGAAAATATTTCCTATCAGTTGGCAGTTACCGCCTCTTATAGTGGCATGGAACCTCTTGAGTTAAACCAAGGCTCAGTGAGATTTGGTGATTTAGGTAGTGTTATTTTATGAACAAGCAGGACTCTACTCAGGTCTTTTATTTTATTATGCTTCTCTTTGACATTCACTCCAGTTAAAGAACTCTTTTAAAAGACCTCCTGCCTGGTCTCACGGAGATTCAAAGGTGTTTGAGTCCTTCCTTATTATCCCCTTGGAAGATGCTTTGAGGACCCCAGTGATGAATCCCAAGAACTCTGTCTCCACTATCCCTGGTATAGGGCACCTCATCACTCTGGCGTTATCCCTGAAGGGCCTTCATAATAATGTGCTTAAA-GAGTCCCCTATTATGTCCTTCAGGATGGAGCTT-GACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGGAACTGAAGTTGGTCATTTCTCACTGGAtcagtcaacaagatttgagtactttctgtgtgctctgcatcattctgagtactctgggggacagaataaggcgtggctcctgccttcaaggagtatggaatttaatagaagatgacaacatACATGATTGTAAATCTGTCTAAATGAGAGTACCTAATTGTGAGATTCCTAATAAACAGCAAGACATGTTCTGAAAATGTGAAACATAAATGAGGTTGAAGAAATTGTGAAAAGTTTAGCAGAGGAGGAATCATTTGTCAGGTTCTTTAAATACAAGTAAAGGGGAAAGGAAGGACCATTTTTAAGTTTAGATATTCCAAGGGTTAGTGGTGAGGTTGATTATGGTATGTCTTCTCGTTGATGAGGGAGGAGACTGGCGAATAGGGGAAAATAAAGTTAAATAGCTAGGGTGGGGCCAAATTATGGGTTTTAATAAAAGCCAGGCATAGAAATTTAGATTGGGGTGGTAGAAAAAGGAAGGCTTTAAAAGTTTTCGAGCCAATGAATGACATCATACAAGTTCTATATAAAGAGCAGTGATTTCAGGATGGGAGAGAATGGCATCAGGAAGACCCACTTGAATGCTGGTAAGTAATGTTA-TAACAGTGCCATTAGTAACATTAATTTT-CTAGGGCCTGGACTGATATGCTGATGGAAAGGAGAATGAAGAATAAGGTGGGATGAAAAAGATTTTTGACAAAGAGTTTTTTAATGAACCTGAAACGGGAAAAGGGCGAGATTAACTAAGCCTGCT------------------------------TACCATGGGCAGCAGTGGGGTTGCTAGAAGATTAGCTGTGGGGGAAAAAGTTATGCATTTACCTTTGGGCATAATGAAATGcaattgactctccatattcatgggttctgcatccactgattcaaacaactgtagaacaaaattgtcagaaaaaacaatacaacaataaaaaatgatacaaataaaaaacaacatggtataccaactatttacatagcatttatatcatagtaagtattattaagtaatctagagatgatttaaagtatataggaggctgtgtgtaggttatatgcaaatactatactattttataccagtaacttgagcatccatggattttggtatacaagggggatcctggaaccagttccccatgcatgt-aaaggatgactgTATGAGTTATCTGTAAAA---TGGTTTGGTTGAAATGTTTAGAAAACAGCTAGAAATACAAGACTGGCTGTTGGATGAAAAAAACATAGGACTAGGAAATTCAGGTATGCTAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGAACTCTCTGTGAGTTCCAAGACAGATGCAAGGACTGGCATTCATGCACAGCTTCTAACAGATAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctattttaggaaattgaaaaatgcaaaaaggtata---aaaaagaaaaggtaatcattaatagtactttagtaaacaagatttgactaaagatatgactttccttccgcttgttttcttatgcatataaagggataggaaat------------------ i nomLeu3.chr23 C 0 C 0 s macFas5.chr11 27964973 2088 + 137757926 ACTATGCATATGAAAATATTTCCTATCAGTTGGCAGTTACCACTTC-TATAGTGGCATGGAACCTCTTGAGTTAAACCAAGGCTCAGTGAGATTTGGTGATTTAGGTAGTGTCATTGTGTGAACAAGCAGGACTCTACTCAGGTCTTTTATTTTATTATACTTCCCTTTGACATTCACTCCAGTTAAAGAACTCTTTCAGAAGACCTCATGCCTGTTCTCATGGAGATTCAAGGGTGTTTGAGTCCTTCCTTATTATCCCCTTGGAAGATGCTTTGAGAACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGTATGGAGCACCTCATCACTCCAGTGTTATCCCTAAATGGCCTTCATAGTAATGTGCTTAAA-GAGTCTCCTATTATGTCCTTTAGAATGGAGCCT-GACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGAAACTGAAGTTGGTCGTTTCTCACTGGAtcagtcaacaagatttcagtactttctgtgggctctgcatcgttctgagtactttgggggacagaataaggcgtggctcctgccttcaaggagtatggaatttaatagaagatgacaatgtaCATGACTGTAAATCTATCTACATGAGAGTGCCTAATTGTGAGATTCCTAATAAAT-GCAAGACAGGTTCTGAAAACGTGAAACATAAATGAGGTTGAAGAAATTGTGAAAAGTTTAGCAGAGGAGGAATAATTTGTCAGGTTCTTTAAATACAAATAAAGGGGAAAGGAAGGACCATTTTTAAGTTTAGATATTCCAAGGGTTAGTGGTGAGGTTGATTATGTTATGTCTTCTCGTTGATGAGGGAGGAGACTGGCAAATAGTGGAAAATAAAGTTAAATAGCTAGGGTGGGGTCAAATTATGGGTTTTAATAAAAGCCAGGCATAGAAATTTAGATTGGGGTGGTAGAAAAAGGAAGACTTTAAAAGTTTTTGAGCCAATGAATGACATCATACAAGTTCTGTATAAAGAGCAGTGATTTCAGGATGGGAGAGAGTGGCACCAGGAAGACCCACTTGAATGCTGGTAAGTAATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGATATGCTGATGGAAGTGAGAATAAAGAATAAGGTGGGATGAAAGAGA-TTTTGAC-AAGAGCTTTTTAATGAACCTGAAAT-GGAAAAGGGAGAGATTAATTAAGCCTGCTTCCCAAACTTTCTGACTGGAAGAGAGTTTATGCCATGGACAGCCATGGGGTTGCTAGAAAATTAGCTGTGGGGAAAAA-ATTATGCATTTGCCTTTGGGCATAATGAAATGcaattggctctccatattcatgggttctgcatccactgattcaaacaactgtggaacaaaattgtcagaaaaaacaatacaacgataaaaaaagatacaaatataaaacaacacggtataccaactatttacatagcatttatatcatattaagtattat-aagtaatctagaggtgatttaaagtatataggagtatatgtgtacgttatatgcaaatactgcactattttatatcagtaacttgagcatccatggattttggtatacatgggggatcttggaaccaattccccatgcatatcaaaggatgactgTATGAGTTATCTGTAAAA---TGTTTTGGTTGAAGTGTTTAGAAAACAGGTAGAAATATAAGACTGACTATTGGATGAAAAAAACATAGGGCTAGGAAATTCAGGTATGCTAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGACCTCTC--TGAGTTCCAAGACAGATGCAGAGACTGGCATTCATGCACAGCTTCTAATAGATAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctgttttaggaaactgaaaaatgcaaaaaggtataaagaaaaagaaaaaataatcattaatagtactttagtaaacaagttttgtctaaagata-gactttccttctacttgttttcttatgcatataaagggataggaaa------------------- i macFas5.chr11 C 0 C 0 e ponAbe2.chrUn 6599338 3207 - 72422247 I a score=-697.000000 s hg38.chrUn_KI270749v1 156870 11 + 158759 gtatgtatgta s panPan2.chr12 73673935 2 - 135337776 gt--------- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 24280 2 - 112215 gt--------- i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chrUn 6602545 11 - 72422247 gtatgtatgta i ponAbe2.chrUn I 3207 I 23 e macFas5.chr11 27967061 0 + 137757926 C e nomLeu3.chr23 26470460 0 - 34552619 C a score=4627.000000 s hg38.chrUn_KI270749v1 156881 23 + 158759 tgtatgtatgtatgtatgtatgt s nomLeu3.chr23 26470460 20 - 34552619 ---atgtatgtatgtatgtgtgt i nomLeu3.chr23 C 0 C 0 s macFas5.chr11 27967061 21 + 137757926 --tatgtgtgtatgtatgtgtgt i macFas5.chr11 C 0 C 0 e ponAbe2.chrUn 6602556 23 - 72422247 I e gorGor5.CYUI01000689v1 24282 0 - 112215 C e panPan2.chr12 73673937 0 - 135337776 C a score=5595.000000 s hg38.chrUn_KI270749v1 156904 4 + 158759 GTAt s panPan2.chr12 73673937 4 - 135337776 gtat i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 24282 4 - 112215 gtat i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chrUn 6602579 4 - 72422247 gtat i ponAbe2.chrUn I 23 I 363 s nomLeu3.chr23 26470480 4 - 34552619 gtat i nomLeu3.chr23 C 0 C 0 s macFas5.chr11 27967082 4 + 137757926 gtat i macFas5.chr11 C 0 C 0 a score=307068.000000 s hg38.chrUn_KI270749v1 156908 364 + 158759 aggatcatgcactatatatagcttgcttctttttccactatgataattttcccatgtcatgaattacggcttgcaagtgcttattcttaacaggctgcattatttttcattatttggatttattgttatttaattggagctctattattgaacatttagattgcttccaaaattttttgctcttgttaatatattgtaataaacttcTGTGAAACACATACTCTTCACCTGCTACTTACATATGACTTCTGTAAGCCGAGACCTctgtatccccaggacctagaaggttacctggacatagtagtttcttaattaaaaaa-aattattgattgaatgaaAGAAGACTATTAAATGTTCAGTTCTT s panPan2.chr12 73673941 361 - 135337776 aggatcatgcactatatatagcttgcttctttttccatcatgataattttcccatgtcatgaattatggcttgcaagtgct-attcttaaagggctgcattatatttcattatttggatttattgttatttaattggagctctattattgaacatttagattgcttccaaaattttttgctcttattaatatattgtaataaacttcTGTGAAACACATACTCTTCACCTGCTACTTACCTATGACTTCTGTAAGCAGAGACCTctgtatccccaggacctagaaggttacctggacatagtagttgcttaattaaaaaa---ttattgattgaatgaaAGAAGACTATTAAATGTTCAGTTCTT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 24286 360 - 112215 aggatcatgcactatatatagcttgcttctttttccattatgataattttcccatgtcatgaattacggcttgcaagtgcttattcttaaagggctgcattatttttcattatttggattta---ttatttaattggagctctattattgaacatttagattgcttccaaaattttttgctcttgttaatatattgtaataaacttcTGTGAAACACATACTCTTCACCTGCTACTTACATATGACTTCTGTAAGCAGAGACCTctgtatccccaggacctagaaggttacctggacatagtagttgcttaattaaaaaa--attattgattgaatgaaAGAAGACTATTAAATGTTCAGTTCTT i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr23 26470484 362 - 34552619 aggatcatgcactatatatagcttgcttctttttccatcatgataattttcccatgtcatgaattatggcttgcaagtgct-attcttaaagggctgcattatttttcattatttggatttattgttatttaattggagctctattattgaacattttgattgcttccaaaatttcttgctcttattaatatattgtaataaacttcTGTGAAACACATACTCTTCACCTGCTACTTACATATGACTTCTGTAAGCAGAGacttctgtatacccaggacccagaaggttacctggacatagtagttgcttaattaaaaaa--attactgattgaatgaaAGAAGACTATTAAATGTTCAGTTCTT i nomLeu3.chr23 C 0 C 0 s macFas5.chr11 27967086 363 + 137757926 aggatcatgcactatatatagcttgctttttttcccatcatgataattttcccatgtcatgaattatggcttgcaagtgct-attcttaaagggctgcattatttttcgttatttggatttatcattatttaattggagttctattattgaacatttagattgctcccaaaagtttttactcttattaatatattataataaacttcTGTGAAACACATACTCTT-GCCTGCTACTCAGATATGACTTCTGTAAGCAGAGACCTctgtatcctcagaacctagaaggttacctggacatagtagttgcttaattaaaaaaaaattattgattgaatgaaAGAAGACTATTAAATGTTCAGATCCT i macFas5.chr11 C 0 C 0 e ponAbe2.chrUn 6602583 363 - 72422247 I a score=4230.000000 s hg38.chrUn_KI270749v1 157272 3 + 158759 ctt s panPan2.chr12 73674302 3 - 135337776 ctt i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 24646 3 - 112215 ctt i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chrUn 6602946 3 - 72422247 ctt i ponAbe2.chrUn I 363 N 0 s nomLeu3.chr23 26470846 3 - 34552619 ctt i nomLeu3.chr23 C 0 C 0 s macFas5.chr11 27967449 3 + 137757926 CTT i macFas5.chr11 C 0 C 0 a score=199062.000000 s hg38.chrUn_KI270749v1 157275 233 + 158759 tttttattctgattccctgtgtatccagaggcctcttatttgtctgcatgtatgagtttggctgtaatgaaagtattggccatatatgaccataaacaggcattcctatttctgtcacagttat-----------------------------atttgtcattctgtattaatacatctataccctgatttctattgaagcatggttatttttgtttgcttctaagcaatgtagctaccctattgatgccgataaaaataaa s panPan2.chr12 73674305 233 - 135337776 tttttattctgattccctgtgtatccaggggcctcttatttggctgcatgtatgagtttggctgtaatgaaagtattggccatgtatgaccataaacaggcattcctatttctgttacagttat-----------------------------atttgtcattctgtattaatatatctgtatcctgatttctgttgaagcatgattaattttgtttgcttctaagcaatgtagctaccctattgatgccgataaaaataaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 24649 233 - 112215 tttttattctgattccctgtgtatccaggggcctcttatttggctgcatgtatgagtttggctgtaatgaaagtattggccgtatatgaccataaacaggcattcctatttctgtcacagttat-----------------------------atttgtcattctgtattaatacatctatatcctgatttctattgaagcatggttaattttgtttgcttctaagcaatgtagctaccctactgatgctgataaaaataaa i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr23 26470849 233 - 34552619 tttttattctcattccctgtgtatccaggggcctcttatttggctgcatgtatgagtttggctgtaatgaaagtattggccgtatatgaccataaacaggcattcctatttctgtcacagttat-----------------------------atttgtcattctgtattaatacatttatatcctgatttctgttgaagcatgtttaattttgtttgcttctaagcaatgtagctaccctgttgatgctgataaaaataaa i nomLeu3.chr23 C 0 I 308 s macFas5.chr11 27967452 262 + 137757926 TTTTTATTCTGATTCCCTGTGTATCCAGGGGCCTCTTATTTGGCTGCATATATGAGTTTGGCTGTAATGAAAGTATTGGCCACGTATGACCATAAACAGGCATTCCTATTTCTATCACATGTATGACCGTAAACAGGCAATCCTATTTCTATCATTTGTCATTCTGTATTAATGCATCTATATCCTGATTTCTATTGAAGCATGGTTAATTTTGTTTGCTTCTAAGCAATGCAGCTACCCTATTGATGCTGATAAAAATAAA i macFas5.chr11 C 0 C 0 a score=798488.000000 s hg38.chrUn_KI270749v1 157508 954 + 158759 tttctgaacctataagactgaggattgggcctaggttgtggtaaattggcaagataatggatactaccctgtcaagagccctctgaagagaaaagtctgccacccttcaccaggtagaaactccTGGCAGTGCCACATTTTCCAGTTTGACGCCCTGTGATACCCTGAAAACACAGATGTTTGACTC--------------TTT--TCAAATAATATTTTAACATATTTTAAGATGCAAAGGCATTGTGTCAGATTTTTTTCTTAAGAATGTATTTCATTACCACTCAGAAGTTAGCTTCCAAAAGAAATAAGTGTGTGCAAAGGCTTATGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTT---ATGGTAATAAAAGCACATTATGAAGAATTTTTTAGGTCCAGTTCACAGATTCCTTGTGCCTGGGGAAAACTTTATTAGAAAATTAGATCATTTCTAATTTGATTAGGGGAAGTCTAATGGGAAAACTTTTTAACTGAGCTGTCCAATTCGAAACATGAATATGTGTGCTGGAAGCTTCTATTGAACTTTACTTAAGTCACATCTAAGACCCTCTGCCTGTCAGTCCACCATTACCCTAACAGTGGTAGAAATT----ATATGACACCTAGATCTTTTTTTGTTGCACTTTT---------------------------------AAGCTGTGTAGGAAACACACTGCCCACATGTTCATACAACACAGAGTGATTATCCACTTAGTTCCTAAAAAGATGTATTTGGTTATGGGGTTTGATCCCACTTTTCCAGGGTTTAGGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGAATCCATTCCTGTTTTCATTTCATTCCTGGGGGCAATATTCAATCTGGTGTGGCCCTCTGTATTATAAAATATTTCCCAGATTGTGTTTATCTGAAATACAAATCCAAGAAGAAGCATGGTGTTAATTGCCGTGTAAAAAAGATTCCAGA s panPan2.chr12 73674538 977 - 135337776 tttctgaacctataaggctgaggattgggcctaggttgtggtaaactggcaagataatggatgctaccctctcaagagccctctgaagagaaaagtctgctacccttcaccaggtagaaactccTGACAGTGCCACATTTTCCAGTTTGACTCCCTGTGATACCCTGAAAAGACAGATGTTTGACTAAATATATATTTATATTTGACTAAATAATATTTTAACATATTTTAAGACACAAAGGCATTGTGTCAGACTTTTTTCTTAAGAATATATTTTGTTGCCACTCAGAAGTTAGCTTCCAAAAGAAATAAGTGTGCGCAAAGGTTTACGATAGTGGTATAGAGAAGTTTTTAAAATAAATGTGCATCTTTTCCTATAGTAATAAAAGTACATTATGAAGAATTTTTTAGGTGCAGTCCACATATTCCCTGTGCCTGGGGAAAACTTTAGTAGAAAATTAGATAATTTATAATTTGATTCGGGGAAGTCTAATGGAAAAACTTTTTAATGGAGCGATCCAATTTGAAACATGAATATCTGTGCTGGAAGCTTCTATTGAACTTTACTTAAGTAACATCTAAGACCCTCTTCCTGTCAGTCCGCCATTACCCTAACAGTGGTAGAAATTCTTTATATTACACCTAGATCTTTTTTTGTTGCACTTTT---------------------------------AAGCTGTGTGGGAAACACATTGCCCACATGTTCATACAACACAGAGTGATTATCCACTTAGTTCCTAAAAAGTTGTATTTAGTTATGGGGTTTGATCCCACTTGTCCAGGATTTAGGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGAATCCATTCCTGTTTTCATTTCATTCCTGGGGGCAATATTCAATCTGGTGTGGCCCTCTGTGTTATAAAATGTTTCCCAGATTGTGTTAATCTGAAATACAAATCCAAGAAGAAGCATGGTGTTAACTGCTGTGTAAAAAAGATTCCAGA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 24882 958 - 112215 tttctgaacctataagactgaggattgggcctaggttgtggtaaattggcaagataatggatgctaccctgtcaagagccctctgaagagaaaagtctgccacccttcaccaggtagaaactccTGGCAGTGCCACATTTTCCAGTTTGACGCCCTGTGATACCCTGAAAAGACAGATGTTTGACTC--------------TTT--TCAAATAATATTTTAACATATTTTAAGACGCAAAGGCATTGTGTCGGACTTTTTTCTTAAGAATATATTTCATTACCACTCAGAAGTTAGCTTCCAAAAGAAATAAGTGTGTGCAAAGGTTTATGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTT---ATGGTAATAAAAGCACATTATGAAGAATTTTTTAGGTCCAGTTCACAGATTCCTTGTGCCTGGGGAAAACTTTATTAGAAAATTAGATAATTTCTAATTTGATTAGGGGAAGTCTAATGGGAAAACTTTTTAACTGAGCGGTCCAATTCGAAACATGAATATCTGTGCTGGAAGCTTCTATTGAACTTTACTTAAGTCACATCTAAGACCCTCTGCCTGTCAGTCCACCATTACCCTAACTGTGGTAGAAATTCTTTATATGACACCTAGATCTTTTTTTGTTGCACTTTT---------------------------------AAGCTGTGTAGGAAACACACTGCCCACATGTTCATACAACACAGAGTGATTATCCACTTAGTTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCACTTGTCCAGGGTTTAGGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGAATCCATTCCTGTTTTCATTTCATTCCTGGGGGCAATATTCAATCTGGTGTGGCCCTCTGTATTATAAAATATTTCCCAGATTGTGTTTATCTGAAATACAAATCCAAGGAGAAGCATGGTGTTAATTGCCGTGTAAAAAAGATTCCAGA i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr23 26471390 943 - 34552619 tttctgaacctataagactgaggattgggcctaggttgtggtaaattggcaagataatgggtgctaccctgtcaagagccttctgaagacaaaagtctgccacccttcaccaggcagaaactccTGGCAGTGCCACATTTTCCAGTTTGACTCCCTGTGATACCCTGAAAAGACAGATGTTTGACTC--------------TTT--TCAAATAATATTTTAACATATTTTAAGACGCAAAGGCATTGTGTCAGACTTTTTTCTTAAGAATATATTTCATTGCCACTCAGAAGTTAGCTTCCAGAAGAAGTAAGTGTGTGCAAAGGTTTATGATAGTGGTGTAGAGAAGGTTTTAAAATAAATGTGCATCTTTT---ATGGTAATAAAAGCACATTATGAAGAATTTTTTAGGTCCAGTTCACAGATTCCTTGTGCCTGGGGAAAACTTCATTAGAAAATTAGATAATTTCTAATTTGATTGGGGGAAGTCTAATGGAAAAACTGTTTAACTGAGCGGTCCAATTTGAAACATGAATATCTGTGCCGGAAGCTTCTATTGAACTTTACTTAAGTCACATCTAAGACCCTCTGCCTGTCAGTCCACCATTACCCTAACAGTGGTAGAAATTCTTTATATGACACCTAGATCTTTTTTTGTTGCACCTTT---------------------------------GAGCTGTGTAGGAAACACATTGCCCACATGTTCATACAACACAGAGTGATTATCCACTTAGTTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCACTTGTCCAGGGTTTAGGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGAATCCATTCCTGTTTTCATTTCATTCCTGGGGGCAATATTCAATCTGGTGTGGCCCTC---------------TTCCCAGATTGTGTTTATCTGAAATACAAATCCAAGAAGAAGCATGGTGTTAATTGCCGTGTAAAAAAGATTCCAGA i nomLeu3.chr23 I 308 N 0 s macFas5.chr11 27967714 990 + 137757926 TTTCTGAACCTGTACGACTGAGGATTAGGCCTCGGTTGTGGTAGATTGGCAAGATAATGAATGCTGCCCTGTCGAGAGCCCTCTGAAGAGAACAGTCTGCCACCCTTCACCAGGTAGAAA-TCCTGGCAGTGCCACGTTTTCCAGTTTGACTACCTATGATGCCCTGAAAAGACAGATGTTTGACTC--------------TTT--TCAAATAGTATTTTGACATATTTTAAGATGTAAAGGCATTGTGTCAGACTTTTTTCTTAAGAATATATTT-GTTGCCACTCAGAAGTTAGCTTCCAAAAGGAATAGGTGTGTGCAAAGGTTTATGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTTCCTATGGTGATAAAAGCACATGATGAAGAATTTTTTAGGTCCAGTTCACAGATTCCTTGTGCCTGGGGAAAACTGTAGTGGAAAGTTAGATAATTTCTAATTTGATTAGGGGAAGTCTAATGCAAAAACTTTTTGACTGAGCAATCCAATTTGAAACATGAATTTCTGTGCTGGAAGCTTCTATTGAAC-TTACTTAAGTCACATCTAAGACCCTCTGCCAGTCAGTCCACCATTACCCTAACAGTGGTAGAAATTCTGTATATTACACCTAGATCtttttttgttgtactttttttttttttttGCCCCTCAGGGAAATCATGGAAAAGCTGTGTAGGAAACACATTGCCCACATGTTCATACAACACAGAGTGAATATCCACTTAGTTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCAGTTATCCAGGGTTTATGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGTATCCATTCCTGTTTTCATTTCATTCCTGGGGGCAGTATTCAATCTGGTGTGG-CCTCTGTGTTATAAAATGTTTCCCAGATTGTGTTTATCTGAACTACAAATCTAAGAAGAAGCATGGTGTTAATTGCCATGTAAAAATGATTCCAGA i macFas5.chr11 C 0 C 0 a score=150322.000000 s hg38.chrUn_KI270749v1 158462 291 + 158759 GTGAAGAGCTTGAGACGTTCTATTCCTTCCTTCATAGGTTCAGttgtttaacccagcatttttcaaacatattttactcctagaacctgtttttcatcagacata-tttaagaaaaaagcgttttgtagaacacatttggacaaatgATACTTTATATCATTACTTTGTTTTTTAAATTTTAGTTTGACTGAATTTTACAGTTTCAGGATTTTGTTTCTGCTTCAGGTTTTAAGCTTTTCTTTTATAAATAGTTACTTTCCTAGTCTGAAATGTATACATTGTTTCAGTAAT s panPan2.chr12 73675515 291 - 135337776 GTCAAGAGCTTGAGAAGTTCTGTTCCTTCCTTCATAGGTTCAGttgtttaacccagcatttttcaaacatattttactcctagaacctgtttttcctcagacatattttaagaaaaaagcgttttgtagaacacatttggacaaatgATACTTTATATCATTGCTTTG-TTTTTAAATTTTAGTTTGACTCAATTTTACAGTTTCGGGTTTTTGTTTCTGTTGCAGGTTTTAAGCTCTTCTTTTATAAATAGTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAAT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 25840 291 - 112215 GTCAAGAGCTTGAGAAGTTCTATTCCTTCCTTCATAGGTTCAGTTGTTTAACCCAGCATTTTTCAAACATATTTTACTCCTAGAACCTGCTTTTCCTCAGACATA-TTTAAGAAAAAAGCATTTTGTAGAACACATTTGGACAAATGATACTTTATATCATTGCTTTGTTTTTTAAATTTTAGTTTGACTCAATTTTACAGTTTCAGGATTTTGTTTCTGTTTCAGGTTTTAAGCTTTTCTTTTATAAATAGTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAAT i gorGor5.CYUI01000689v1 C 0 C 0 s macFas5.chr11 27968704 291 + 137757926 GTCAAGAGCTTGAGAAGTTCTGTTCCTTCCTTCATAGGTTCAGTTGTTTAACCCAGTGTTTTTCAAACATACTTTACTCCTGGAACCTGTTTTTCCTCAGACGTA-TTTAAGAAAAAAGCATTTTGTAGACCACATTTGGACAAATGATACTTTATATCATTGCTTTGTTTTTTAAATTTTAGTTTGACTGAATTTTACAGTTTCAGGATTTTGTTTCTGTTGCAGGTTTTAAGCTTTTCTTTTATAAATAGTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAAT i macFas5.chr11 C 0 C 0 a score=144.000000 s hg38.chrUn_KI270749v1 158753 1 + 158759 G s panPan2.chr12 73675806 1 - 135337776 G i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000689v1 26131 1 - 112215 G i gorGor5.CYUI01000689v1 C 0 C 0 s macFas5.chr11 27968995 1 + 137757926 T i macFas5.chr11 C 0 C 0 s tarSyr2.KE926941v1 115515 1 + 455071 g i tarSyr2.KE926941v1 N 0 N 0 a score=2784.000000 s hg38.chrUn_KI270749v1 158754 5 + 158759 AATTC s panPan2.chr12 73675807 5 - 135337776 AATTC i panPan2.chr12 C 0 N 0 s gorGor5.CYUI01000689v1 26132 5 - 112215 AATTC i gorGor5.CYUI01000689v1 C 0 N 0 s macFas5.chr11 27968996 5 + 137757926 AATTC i macFas5.chr11 C 0 N 0