##maf version=1 scoring=roast.v3.3 a score=60.000000 s mm10.chr5_JH584296_random 13952 2 + 199368 TA s echTel1.scaffold_296031 43011 2 - 45094 TG i echTel1.scaffold_296031 N 0 N 0 a score=67831.000000 s mm10.chr5_JH584296_random 23877 1404 + 199368 aaggagctaatgaggaagagtcatgtctttagAGTTAGGGGCAGCAGTGGAGGTCTGCAAACACAATAGAAAAAGAT-----CGTCTACATAAGAAAATGGCAAAAAGCCCAGAATAGTTCAGCAGGCATGTTTAGAATTTACACAGGTATTGGAAGGAGAAAGACTGTATTCACAGCTTTGAGTTGGAACCAGGGCAACAGGCTAGTTTGGCAGTGAAAATGACTGACCAACTGGTAGTAGGGAAGTGTAAGAACAGCGGCTCATTATGGGGTTGATCATTCCTCCCATGTCCTTGGAATATCTTCAGGTGAACCAGCCTTCTTGTGGGATGGTCTCCTTTG---------------------TGGGATTAACTCACAAGATAAAGGGATAATATAATGTAATGTTCTAATCTTTGGTGCAGGTTAAAATGACAG-GTTCTCTCAAGGTCAGGTGTATAACTCA-ACTCTCACATTCTATGCCCAAGAGAAAGTAGATTTCCTTTAGCATCTGTTAAAAAAATCCAATACCTCTGCCTGATTCCTAGTAAGACCAGTGACACttgctgtgaagaaattc-ccaaaagaagcatttttcctggaaaagggtcttcgttgtctcaaagttcaagggaatactgtccatcacagcaaagaagacatcatggcaagagtgagaggcaagtggtcaggatgtgcaca---gtcgggagcagagagaaggcaagggtcatagtaaatttacactccctttcttattctctcatgacaccagcaaatggggt--------cagcctatgaaacagtacctccacattcagattggagcatcggcccaaagcctcttttcacaatgccatcaggtatgtttgcttgatgtatctaaagtgcaccaaggtgacaaagttaaccatTTTATAAATGCTTTTTATGTT------GTAGTTTGATTGGttttggttttggacagtttgtctgtatagctttggctgtgcttgaactctgcagacaaggtgagcatacaaggctcagagctctttttacctctctgttttatgatgctggtattgaaggtaagctccactagacccagcCCCATAAATGACTCTGAGCACCCAGAGTAGAAAACTAGAAGTTTTCACTGAAGTTGGAGAAAAGGTACAAGACTGTGGCTAAAGACATTAAATACTTCCAAGGATTTG--CTCTTTGAGCCCTAGCAAGTCAGCAAATGGAATCCTCAAAGGTGAGAGCAAGTTGTGCTTTCTAGTAACAAACATTCAAACTACCACACCTTCAAACTTTAACTGAATTCAGAAACTAACTCTCCTGAATTCCCAGAAACCTCTTATTTAGGTGATTAGACCCTGTCTAGTTGAGAGATGATCTCTTTTGCCAAAACCTTATACCTCATCCCAATGCCAATCAAAATATCTACTTATCTGATTTT s rn5.chr14 99191911 1380 - 115151701 AAGGAGATAATGAGGAAGAGTCGTGTCTTTAGCGTTAGGGACACCACTGGAGGTCTATATACACCATAGATAAAGGCAGGTGGGTCTATAGAAGGGAAGGGCAAAAAGCCCAGAGTATCTCAGCAGGCACATTTACAATTTATACAGGTATCAGTGGGAAAG----CTTAAAGAATGCTTTGAGTTAGAACTTGGGCCATAGACTGGTTTGGCCATGAAGATGACTGCC--ACTGTTAGGAGGTAAGTGTAAGAACAACATCTCGTTAAGGGGTTAATCACTCCTCCCATCTCCTTGGAGTAGCCTCACGTGAACCAGATCTCTTTAGGGATAGTCTTCTTGGACAAGTGATTAACAAGCCCAGTTGGATTAACTCATAAGATAAGGGGATAATATAACATAATGTTCTAATATTTGGCACATATTACAATGGCAGAGCTCCCCCAGCATCAGATATCAAACTCAGACACT---ATTCTATGCCCAAAAGACAGTAGATTTCCTTTAACAACTGTTAAGAAACCCCATTTTTTCTGCCTGATCTCTGGTAAGGTCAGTACCACttgctgtgaggaaatactcccaaacaagcagtttatatggaaaagg-tctactttgtctcagagttcaagggaatactgtccatcaca---aggaatacaaggtggtatgagtgagaggcaactggtcaggatgtgtgcacagggagagagcagagagaaagcatggctcacattcagtttgcactc----tcttattcagttttgactttagcatatggggtgatggcctcagcctatgaaacagcacctctacattcagagtggatcatctgcccaatgagtcttttcataacacaatgaggtatatttctttgatgggtctaaagtacagcaagatgacaaAGTCAGTCATAATATCAATGATTCTTTTGTTTTTGATGTTGTTTGATTACtttggttttgacacagtttttctgtgtagttttggctcttgttgaactctgcaaaccaggttacactacatttctcagaaatcttccaacctctctgccttatgaCGC-------------------------------------------------------AGAGTAGGACATTAAATATTTTCAGTGAAGTTGGAGGAAAAATACAAGGCTGTGACCAAAAGCATTAAATACTTTCAAGGATTTAACCTCTTAGAGTCCTAGCAATTCATTGGATAAAATCCTCACAGGTGAGAGCAAGTTGCACTTTCAAGTAACAAGCATTGAAACAACCACACCTTCAAACTTTAATTCAATCCAGAAACTTAGCCTCCAGATTAATGAAAGACCTCTTTCTTAGGCTATCAGAGCCTGTCTAGTTGACAGACAATTCCTTTTGCCAAAACCTTTCATCTCCTCTCAAAGACAATCAAAGCATCCACTTGTCTACCTTT i rn5.chr14 N 0 I 8 a score=0.000000 s mm10.chr5_JH584296_random 25281 960 + 199368 GGTGTTTGGGTTCtgtattagtcagggttctcaagagtcacagaacttatggatagtctctatatagtaaaggaatttattgatgacttacagtctgcagtccaattcccaacaatggttcagtagtagtgaaagatcctggcagaatgtaaaaggacacagaagtcctgaaattggcaagatagacgtcagtgttagcagaactagcttcactgatttagaaaaatagaggtgcacaatgctctggccactccttgaacctgtgtgtctgccaatgttctgaccaggtgtgtgtccattgctgcaccttcattagactctttccttgtacccctcccatacccatttcttgagaatagacattgtttagatctggaaatcacctactctccctcttctcctttcccccctgagggcctataaaaactgggaactctttcccctcgaggatgactcctctacccctgtgtgggatatgagtcgtccccagagctctggctttccccgaataaaacctcatgtggtttgcaacaagctcggtctgtcgtgagttcttgggtgtccactattgtcctgaggcctgagcgaggggctcctctcggagtctttcagtagctgtgaatggaagtccaaggatctagcagttactaagtcccacagggcaagcaggcaaaggagagagagtgagaatcccttcttccaatgtccttatctggtctccagcagaaggtgtagcccagattaaaggtgtgttctaccacacctttaatcccagatgaccttgaactctgagatctccctgtcttaatcttctggaatccatagccactatgccttaagatccagatcagaaatttctatctcccagcctccagattagggtcactggtgagccttccaattcaggattgtagttcattccaaatatagtcaagttgacaaccaggaatagccactaca e rn5.chr14 99193291 8 - 115151701 I a score=6236.000000 s mm10.chr5_JH584296_random 26241 153 + 199368 GGTTCCAAgtgatggctaagcatgtttatgg-atttagaatctgtatggaaatccacctgagaatatttcctaaaacctgcaactgagaagaaaggtaaaaccaactaaaatgggagtggtaccatctaatggactagaggccagaactgaatg s rn5.chr14 99193299 153 - 115151701 GGTTTGGtgtgatagctaatttttttaacggcatttagaattactatggaaactcacctgagcgtgtttcctaaaacatttacctggccaggaacgt-gaaccaaattgaattggaatggcaccatccaaaagtctagtagccaggactgaata i rn5.chr14 I 8 C 0 a score=0.000000 s mm10.chr5_JH584296_random 26394 400 + 199368 tgtgaggagcaggtgtggcagtagtcccaagatgatgcctgggactgctgctaaatcttatgacttgcacctgacttcctcatacacctgaaaataagccacgaccatcgtgagaactgcgcaggtgcaccatgatgctggcggtgtaaacaagtccatatttggtggagatgtgcccctgctggcctgattgactgaagctgcgtgcctggtgaggtgacgcagcctgttgtgagtggatgggggctgagagtatataagagtgagaggcccggggttcagggaaaaagagagatgaagagggagagagatgtagactgaagcttgctgaataaattgctgttagaagaactggtggccctgtagttctttctggtcgagagcagatgcgacatgaatt e rn5.chr14 99193452 0 - 115151701 C a score=13189.000000 s mm10.chr5_JH584296_random 26794 251 + 199368 aaagagagaaatcaagctgagcaccacatac-----tctctgcttcctgttaggatacactgtgaccaggcctctcctctttccacaagtcctttcccacaataccatgctgtag--catcccaagaacagcaggcaaagtaaactcctttctctcttaagttgtttcttgtgagggttctgacgacagcaTTtgtttttgcagctactaatgttcagagcctgaggcttgatagacctaaaaagtcagatgtggtca s rn5.chr14 99193452 253 - 115151701 aaacagggaaagccaggtgagcaccaaattcatctttctttgcttcctgtttggatgcaccatgaccagg-----tctcttcccatcattccattcccacagtattgtgctggagaacaactcaagaacagttggctaaataaacccctttctctcttaaggtgcttcttgtgaggtttctgatgacagcaaTTGATAGTGAATCCAGTAAGGTTCAGAGTCTGAGACTTGATAGACTTAAGAAATCAGGTGTGAGCA i rn5.chr14 C 0 N 0 a score=20187.000000 s mm10.chr5_JH584296_random 33340 511 + 199368 TCCTTCTGGCAGTAGAATATGGGCTACAATGTCCTCACGTGTCTTCAAGGTTGTTTCGCTCACCTGGGCCTCAGAGTGATTTTATTCCACATTTTTTCTTCTTTTGATTCTTCTGCCTTTCCTACCAGCAGACTTTGCTCCTTCAGGAAACCATTGATAAGAAATGCCAGTCTCTCTTCCTCACCCTTGCTCAGGTGTTTCCAGAGCACTGTAATGTATACTTCCTCTTTAAGCTGCAGCTCCTGGTGGCTCTTGGGTATGGGAAGGTAAAAATAACATAGACTACCTCCTCCTTCGGCTCTTGCA----AACAAGAGGCCATGTGTGGCACTTCCCACACCAATTCTGTGGACAAAGGGTGTTTGAAGTTAGGTAT-TTACAcagtctctctattgtgggctcctgtgaaaataaaaattaaatgaaatactttcttactatagagaaaaggaccagggtacagtgccaatgatactagagcaaaatcaaactgcaatagtgtaaatagttcaat s rn5.chr14 99311592 488 - 115151701 tcCTTTTGTTAATAGTAAAAGGAGTAAAATTTTCTCCTGTGTCTTCAAGGTTATTCAACTCATCTCAGCCTCAGAGAGTTTTTATTCCATATGTTTTCTTCTTTTTGTTCTTCCAC----------AGCATAGCTTGACCCTTCAGGATACCATGGATAAGAAATGCCAGTCTCTCTTCCTCATCCTTGCTCAGTGGTCCCCAGTTCACAGTAACAGGAATTTTCTTTTTAGGTTTCCATTCATGGTGGGTCTTGGGCAAGTGGAGAAAGAGGTAACACAGA-TACCTCCTCCTTAGGTCCTTTTAGGAGAACAAAAGGCCATATGTGGTAC-ACCCTCACCTATGCTGTGAACAATGGGTCCTGGAAG--AAGTATCTTACAcagtctgtcacctgcgagctcctgt--------aaactgaattaatttttttcata------aggaaataattggtgtacagtcataggcacattagaactcaaatgaactagaagagtgtgaattgttcaat i rn5.chr14 N 0 I 1823 a score=0.000000 s mm10.chr5_JH584296_random 33851 1720 + 199368 gtcctccactcctactaacttctccagatacacagaaacactcctccccagagatgacagccagacaggacaaaacaagatgctctaagtcaaggcaaacatctccatgtcaaggatgtagaagggaacccaacaagaggaaaaCGGTATGTTTTCAGTCATTCTCTAATTTAATTTCCACCCTATAttatgttagtttacagatcatagcttcccctccctcctgtcctctcaatcattccctctcctctcccttctcccaactcccctccccttctcagagaaggtgaggcctcccatgaatatatgttggctgacctaggtgcatctttttctattgaggctagataaggcagcccacttaggggaaagggatcccaaggcaggcaacagtcagagagagcccttgctcctattgttccaggtgccacatgaagaccaagctgcagaactgttacatttctgggtggctcatgtctatcctatgcaagcactctggttgttggttcagtctcagtgagcacctatggggctaggttggttgattctgttagtgtgtgtgtgtgtgtgtgtgtgtggtgtgcttgacctctttggctccttcaatccttctttccctcctccagaagattccccaaactctgtctaatatttggatgtaggtctctgcatctgtttccatcagtagctgggtgaaatcttcaaagaacacttatgcaggtctcctctttgtagaatattatagtgtcagggCTAttgaactaattgagaaaggtcaccacctcctgaacagaacacccatatttcaggtgctaagatcaacaataaatggggcctcatgaaactgaaaatcctctgtaaggcaaaggacagcatcaataggacaaaatgtcagtctaaacgaatgggGGTATGGATTCTCTTAAACTGCTTCCTGCTGTCTAGGGTGGTCATTAATTTTGGGGTGTAGCCAACATTCACTATTGGGGTCTACTTGGTAAATGTTCACACCAGGTTCATCTGTTGACAGCAGCTCCTCTGTAGACAGTGTctagtaatcctgtaacaggaactgattaatagtttgtttataaattttttgtatttgccattgaaggaatgtagaagattaatgaggcagggtgtgaataataaaaccaggaagatggctaggagaggcgttacaaaagggagtatccacttgggttgggggtatccatgttgggttctggaaaatcccagaactggaggtcttgggttccctgaaattctgtatgtctgattctagctactggattttatttctcactatcttggattggttgacttagaaacagcattcttcttggaggaataagcaaagactaccttctttagctgtcaggacatctagcacccatcagttctgaagcaccacagctgtcaaagaattggtctgtttctggatagtaagaatagtttcagacattttttgaaaactgctttcaaatttagaagtgcacttattatattgggaaatggaagtcattatccctgtgattcaagtttcagctcctatggctattcctgcagtgacttagagtggcacaacctgaattgccctcttatgttgagcagctgtctacaactgggattgcaagggttcatttccatggattactcctaattcagggaaaaggagtaccaacatgcaaattccttaccagccagcaggtaggta e rn5.chr14 99312080 1823 - 115151701 I a score=100.000000 s mm10.chr5_JH584296_random 35571 1 + 199368 c s rn5.chr14 99313903 1 - 115151701 c i rn5.chr14 I 1823 T 48046 a score=5006.000000 s mm10.chr5_JH584296_random 35572 90 + 199368 tggcctcagtgggaaaggatgcatttagtcctgatggaacttgggtgtgccagggtggtatggtacctggtgggggtgaggagtaggTGT s rn5.chr14 99265858 89 - 115151701 tggcttcagtgggagaggatgcatttagtcctcatgcaactttg-tgtgacagagcagtatgatacctagtctgggtgtggcctgggtgc i rn5.chr14 T 48046 C 0 a score=0.000000 s mm10.chr5_JH584296_random 35662 646 + 199368 TGAAGTcttactcacaaagaccacagagatcgccatcactgcaaaccgcatgaggatttttattgatccaatatgttggggactcccctctctgtatgcaggccagaggagagacccagaacaaaaaagaacacactttttataccttgtaaggagcagatttaagcaacagggttctcattggtgtagcaagtaaccctttcagacattggttggtttgtatagtgactacctctgacctagtgactcactttggttgcccccatggtgggttattatgatttggtcagcaaagcaatagtacattttgaacttatgggtcagtcacagctactaacgtcacagggaatcctagcaaggtcagtgcggtttgtggtctttctcagaatttagtgtggggcggggtaggggatttctctgggagctgctatcctgttatggttatttctctgagaacggctaatattgttttggcagcttgtaggcttaatcattttgaacacccaaactaagtttttacatttgtttagtcatccagcttccttatctggctctgcacttggcctgctagtacagtttggaaagtcctttttgaaggcggaaggtactggtggtcttggattcattttggatattCTGTCAGTAA e rn5.chr14 99265947 0 - 115151701 C a score=11711.000000 s mm10.chr5_JH584296_random 36308 295 + 199368 CTCTCCTTTTCTGGGGAGAATGGGAGAAGGAAATGAGGAGAAAAGACAGAGGGTAGGTAGGACTGGAGGGCAAAGAAAGGCATGATGTGATCACCTGGTAAAGAGAATAAATGAGTTAATGGAAACCAAAAGAAACGATAAAGAAGGAGGTAGATAATTTAAACAATTAAACTTTGTCCACTGCAAACAGAAATGAAACATGTTTTCCTTGAAACATGTTAGCAACATATGTTTTCATGGGCCACTTTTAATTACACTAAAAAACCTCATGAAATATGCAAGTACTTTGGTAGAA s rn5.chr14 99265947 289 - 115151701 ctgtccttctctgggaataatgggagcaggaaatgaggggaaatcgtcaaagg---gtaagactgggagtaaagcaaaggaaagaggtgatcgggtggtaaagtgaataaatgaattaaTGAAAATAAAATAAAATGATGAATAGGAAGCTCGCTATGTTTAACATTTAATCTTTGTCCACTG-AACCTCAATAATAAGAAGTTCTCCCTGAAACAAGTTATCAACTTATATTTTCAGGGAACACTTTTAATAACATTAAAAAG--TAACGAACCATCCAATTGTTTTACTCTAA i rn5.chr14 C 0 N 0 a score=10027.000000 s mm10.chr5_JH584296_random 36627 208 + 199368 AAGCTTGATGGCTGTCATTAGTATGTACTTATAACTGATAATTAGCATATGCCAATTATACAAAGAATCTTGTTTCAGTCAGCCCTTTCCCTACAGACATAAATAGATAAAGTTATATTTATTCTTAGTTTTGTATCTCCCTCCCTCTTTCCTTTTTTCCTTTCTCCTCTCTTGTTAATATGTGCTTAAGATTTATACTATAAAAATC s rn5.chr14 99040414 199 - 115151701 AAGATGGGTGACTACAGTTAGTTTGAACTTAGAACAGACAGT----ATATGTAAATTATACAATGAAT---GTTTAAGTCACATACTTCCCTACAGACATAAATAGGTAAGGTTATGTTTATT-TTAATTTCTTATCTCCTTCCCTCTGTACATTTTTC-TTTCTCCTTCCTTATCAATATATCCTTAAAGTTTATACTATAAAAATC i rn5.chr14 N 0 I 3 a score=0.000000 s mm10.chr5_JH584296_random 36835 184 + 199368 ATTAAGGTTGtttttttctgttttttttttttttttttttggtttttcgagacaaggtttctctgtgcagtcctggctgtcctggaactcactctgtagaccaggctggccttgaactcagaaatccacctgcctctgcctcccaagtgctgggattaaaggcaggcgccaccaccgcccagct e rn5.chr14 99040613 3 - 115151701 I a score=4714.000000 s mm10.chr5_JH584296_random 37019 74 + 199368 AGGGTTTTGTATTATTTTGATTTTTATTTACTTATTTTTCACAGCTTTTATTCCATTCCTGAGCAGGAATAAGA s rn5.chr14 99040616 74 - 115151701 TGAGATTTTTATTATTTTGATCTTTATTTATTTATGTTGCACATCTTTTATTCCATTCCAGATCAGGGATAAGA i rn5.chr14 I 3 N 0 a score=14712.000000 s mm10.chr5_JH584296_random 37093 336 + 199368 TAAAGTCAAGAGAGACCAGAAGGAAAGTGCAGAGGGACACTAGCTCCATGTCAAAAAGAGGTTTCTTGAATTTTCCTAGTAGGTATTTATAAAAGTAGATAGAATGAtactgaatttctgctctgaagtctcaacctgtatggtgctgagaaaacagttatgaa------caccctgtttaatggggttcacagatccagtgaatggatagataaacaCTCTAGGAAGTGCACTACATCCAGACCTTTCTTGGACTGACCCCGGCCGGATATTGCAATTGCTTTGGCAGACCTACATAGTGAATATGTAAGA---AACCAACAAGGAAACCTGCAACACACACGT s rn5.chr14 99199667 332 - 115151701 TGAAATCAAGGGAATCCAGAAGGAAAGTGTTCTGGCACCCTAGCTGTTTGTCAAGAGGAAGTCTCTTGAATGTTA-TATTAGGTATTCAGATAAGTGGATagaatgatattaaatttctgctctgaagtctcaacctgtagagtgctgagataatagttatgtatttttacacccTTATTAATGGTGTTCCTAGATCCagtgaagtga-agtgaagt-------gaagtgaagAACATCCAGACATTAGTTCTAATGACTCGGG----ACATTGGCACTGCTTTGACAGATCTACTTAGTGACTATCTAAAAGTAAACAAACATGCAAGCCTTCAACATACACAT i rn5.chr14 N 0 C 0 a score=0.000000 s mm10.chr5_JH584296_random 37429 463 + 199368 ACAAAAAACGTTTGATagacactattgcatacaccagaaagattttgctgaaaggaccctgatatagctgtcccttttgaggctatgtcagtgcctggcaaacacagaagtggatgcttacagtcacctattggatggaacacaaggcccccaatggaggagctagagaaagtacccaaggagctgaaggagtctgcaaccctataggtggaacaacaatatgaattaaccagtacccccagagctcgtgtctctgtaacagaagatggcctagtcagccgtcattgggaagagaggccccttggtcttgcaaactttatatgccccagtacaggggaatgccagggccaagaagtgggagttggtaggtagggaagcagggtggaggggagggtatagggtactttcaggataacatttgaaatgtaaatgaagaaaacacctaataaaaaaATTGGAAAAA e rn5.chr14 99199999 0 - 115151701 C a score=25290.000000 s mm10.chr5_JH584296_random 37892 468 + 199368 GAAAAAAAAACATTTGAAATATAATGAATTAACAATAATGCCAAACTGGTAAGTTTTTATGTAAAATAGACACCTCATTCCTTGTGATTGTGTATCCACAAGTACTTCTTGCATTGTCAAACATgggccgggagagaagatggctcagtagt-aagagtcctggctgctcttccagacaaccagagttcaattctacacaaccacctggctagtttacaaccatctatatagggttctgatgccttttcctgacatgtaagcatacatgcagctagaacaggaatatacttaaagaacatacagaaataaataTTGAACATTGACAACCTCCTAATTTCTTCTCACTCACCCCTGGTGCAGGATGTCAAACTCTGGAGCCCAGAGCACCCTACACTATTGCTCACCAACAGAGGTCAAAGGACACACCTGAAACTCCACATGCTCTCTTCACTGAGCCATACAACTGCT s rn5.chr14 99199999 457 - 115151701 GTGCACAAGACATCTGAAATGTAACTAATTAAAGATAATGCCAAACTG-TAAGTTTTTATGCAAACGGGAAACATGATTTCTTGTGATTCTGTATCCATGAGTGGTTTTTAGTTTGTCAAACATGGg------gggatgatggctcagaaattaagagtcctggctgcgctttcagacaacctgtgatcaattctagacaacaatctggc-agctcacaaccatct---tatggttctgatgc-ttttccggtcatgaaagcatacagaaaaatagaacacaaatatacataaatTGCATACAGAAATAAATGTTGTATGTTGACAAACTCCTAACTTCCTCTCACTCACCCTTGGTGCAGGGGCTCAAACCCTGGAGGCCAGAGCAAACAAGGCTATTGCTCACCAATTAAGCTCAATGGACACACCTGAAACTCCACATACTCGACTCACAGAGCCACACAACTGCT i rn5.chr14 C 0 C 0 a score=0.000000 s mm10.chr5_JH584296_random 38360 359 + 199368 GtcacctccccagcctgaaacctgtttgctcaggtttcagtgttagctagaagagagcatcagggcggagcttgcagccccatcattttgccactcccactgccgcttactgttctggagtaagtaacacttggtcacttgcaactttactccaggatgatttggcaggaaaaggccccttcccctgcttcataaccgagtgtcagaaatagtaaaatcgaaccttgatcagactggctgtcttgtttccatctttatcgcaccgcctagccccccactccttctcttgcagattccaagatgcctttgcagactagaacccacacatgtgagccgctggccagccacaacaAACTGCT e rn5.chr14 99200456 0 - 115151701 C a score=14578.000000 s mm10.chr5_JH584296_random 38719 303 + 199368 ACTGATCAACATCACCATTTTAATTAATTGAGCCATTTTTTATTTGTTTGTGAAATTGAGTCtttattattttattttttttttatttaaaGACTTCTTTGGCTAGGCCTATAGCTAAATGAGTATTAtgtggatttgtgcttgtgaaagccagggtccacataacccagaaaagagggtcctatcacctgaagactgagtacctgtaaagaacaacctgattatttccactgaaatcaaactttggtcctctgcaaaagcagcacatactcttaagctgtgagcaatctctcTCAATATATg s rn5.chr14 99200456 285 - 115151701 ACCAATCAATATCCCCATTTTAATTAATTTGGCCATGTTT-ATTTCTTCGTGAAATTGAGGTTTT------------TTTTTTTATTTAAAGACTTCTTCAGTTGGGTGTATATCtgcatgtgtgtta----ggtttgtttatgtgaaaggtgggatccacaaagttcagaaaa-agtgtcctatcacctgaagcctgattttcatttgagagccacctgattgtaagctctgaaaacaaactttggtcctctgcaaaactagcatgtgctcttaacctgtgagcaatctctcTCAAAGTATA i rn5.chr14 C 0 C 0 a score=0.000000 s mm10.chr5_JH584296_random 39022 944 + 199368 gctttccagttttgttgagtatagccttttgtagaaggatctgatggtgttttggatttcttcaggatctgttgttatgtctcccttttcagttctgattttgttaatttggattttgttcctgtgccctctagtaagtctagctaagggtttatctatcttgttgattttctcaaagaaccaaatcctcgtttggttaattctttgaatagttcttcttgtttccacttggttgatttcaccccggagtttgattatttcctgccatctactcctcttgggtgaattttcttccttcttttctagagcttttagatgtgttgtcaagctgctagcatgtgctctctcccgtttcttgtggaggcactcagagctatgagtttccctcttagaaatgctttgtgtcccaaaggtttgggtacgttgtggcttcatattcattaaactctaaaaagtctttaatttctttctttattccttccttgaccagggtatcattgagaagagtgttgttcagtttccacgtgaatgttggctttctgttatttattttgttattgaagatcagccttagtgcatggtgatctgataggatacatgggacaatttcaatatttttgaatctgttgaggcctgttttgtgacttattatgtggtcaattttggagaaggtaccatgaggtgctgagaacaaggtatatccttttgttttaggataaaatgttctgtagatatctgtcagaaccatttgtttcataacttctgttagtttcactgtgtccctgtttagtttctgtttccatgatctgtccattggtgaaagtggtgtgttgaagtctcccactattattgtgtgaggtgcaacgtgtgctttgagctttactaaagtttctttaatgaatgtggctgcccttgtatttggagcatTTAAAAAAATATATATG e rn5.chr14 99200741 0 - 115151701 C a score=9368.000000 s mm10.chr5_JH584296_random 39966 154 + 199368 GCTTTCTTGTTTAAGGAACttgaatgcatgtttattattagcaaatctcaggtgagttcactggtccgaaggaacaaggccagagaactggacattcagacagggagtcaggttgtggggaaagacaga---aaagagcctgagagaggTTTGTTGT s rn5.chr14 99200741 157 - 115151701 GGTCATTTGTTTTAAGAATGtgaaagcatgtttactgtgggcaaatgtaaggtgagttcactggtcccaaggaacgaggtcagggaagtgggcatgcagacagggagacaggtcgtgtgggaagacagacagaaggagcctgagagaggTTTCTTGT i rn5.chr14 C 0 I 3558 a score=41643.000000 s mm10.chr5_JH584296_random 40120 995 + 199368 TTCTTTGT-------------CTTCTTCTATCCCTTAAGCCAGCCTAAAAGTCCAT--GTGTCCAACAATAGCTGATTCCTTTATCCACCT---------TTTGAATTGTGACAAGCCTTGCATCAATGTGTACATTTTGACTTATCTCCAGAGGGCATCTGTTGCCGAGGCCTTAAGTTTAGCTATGCTATTCAATGCAGAAAATAACAATGATATTTAAACAGAGAACTCATGTTCTAAGTGTTCCGTAAATACAGAGTAACGATAAATTGTTTTATTGATAGTTTACCATACAGAAAGGGTTAAT---GACTAGGCAAAGGAGATTTTTCTATTGCTTTTAATAAAATTGAAGACTTAAAATACACATCTTTTTGAAAGTAAATACTTTATGTAGCAAAGGTACCTGCATAATAGTGGGCACCTTTTTATACACTATGGTTACTTCATAGAGTTTGGGACTCCATAGGAATAGAGCTCTAGAGACATGTGGCATA--GACTGTATATAGAGGTTCTTTTTAGTAAGCTCATTAAGGCATGACAAAAAGTTCAGGAGTTCAAAGCTAGAATGGAAAGCCTGTTTACTTTGCTCTATGTTGTCTTCTTACCTTTAGGCATCTTTGAGGGGTCCAAGGTGCCTTGTGGTCTCAACATACTGGATATTAACCATCTGTGATCATTTTAATCCCTCTTCACAAGATTTATGTCTATGTTGCTCACATTAATGTAAATGTTTTGTGCACATAACTGATCAGCCACCCAAAAGTGTTATACGTGTAGCCCAGGCAAGAGACTAGGGAAAGATGTGTCAAGAAAACTTTTATTTTATACATGCCATATTCACCTGGAACTTTGCTTCCTTCATAAAACAACAGTGTCTTTCCAAACCTGGACCTATTCTATCATCCTGACACTG---AACCTGGTAGTAAGGTTGGAAAAAGTCCAAGACCCCGGGGAGACATCATCCAGGTTGATA--GGTACACAA-AAAGCATCTATATATACTGTCTGGGCAGAAGCCACA s rn5.chr14 99204456 1001 - 115151701 TTCTTTGTTTGTTTGTTTTGGCTTCTTCTGTATCTCAGGCTAGCACAGGTTTCCACAAGTTTTCCATGTTACCTGATAACTTTATCCACCTACTGAAGATTGTAAATTGTGATATTCCTGGCATGAATGTATTTATTTTGACTTCCCTTGAGAGGACAGTTGTTGGTGAGTCATTAA-TTTAGTTCCATTATTCAATTCATACAATCACAATGATATTTAAACAGAGAACCTGTGATCTATGGGCGTAATAAATACAGTGTA-CAATAAATCATTTTATTGATGTTTCACTATACAGCAAGTAGTAATAATGACTAGGCTGAGGGAGATTTTTTATT---TTTGTTACAAATCAATACTTAGAATAAAATTCCTTTGCAAAATAGATGCTTCATATAGTAGAGGGAACTCTATATTATTGGACACCTTAC-ACACACTTTGGGTCCTATGTAGAGTTTGGGAGTCCATAGGAATAAAACTCTAGAGACATGTGGCATAAAGACTGGACATAGAGATTCCCAGTAATAATCTCATGGAGGCATGACAAAAACATCAAGACTTTAAAGCCTGACCGGAAAGCATGTTTACCTTGCCCTGGGTTGTATTCTTCCCTTTAGTCATCCCTGATGGGGCCAAGGTGCCTTGTGGTTTGAATGTATTGTATTTTCATCTTCTGTGATTCATTTAATCCTACTTCATTGCAGA-GTGTCTAGGCTGCTCGCTTTAGTTTGAATGTTTAGTACACATAACTGATCAGCCACATAAGAAGGTTGTAAATGTAGCCCAGAAAAAGGACAAGGGAAAGAAGTGTCAAGAAAATTTTTATTTTATACATGCCA------------------ATGCATTCATG---CACCAGTGCCTTTCCAT-TCTGGACCCATTAAACATTCCAGGCACTACCAAGCCTGGTAGCAAGGATGGAAACAATCAAAGAGCACAGTGAGATAACGTCCAGTTTTATATAACTACACAACAAAGCATCTTGTTAGACTGTCTGGGCAGAAGTTGTG i rn5.chr14 I 3558 C 0 a score=5678.000000 s mm10.chr5_JH584296_random 41115 226 + 199368 TATAAATGCCAAACTGTTTTTCTGACTCCATCATGCCCCTGGTCCAACAGTCTATTGGAATAGTCCACATT---TCAATCTAAGCATT----CAGGGTCCCAGTCACTAC----CCATCTCTTTACTTCTAACCATAT------GGGAAGTGTCTGAAGTCACAGTCTCTGAGCACCTTGGATGAGAGATGTGTCCAA-----AGCATGTCATTTATTCATAGTCAGAAGTCC----TGTATCCATGT--TTAC------ s rn5.chr14 99205457 223 - 115151701 TATAAAGGCCAAATTCTGTTTCTGAGTGAA-CAGGACTTTCTTCCCACAGTTAATTTAATTTTTCTCCATG---TCCAGCTCAGCATT----CAAGATCCCAGTCTCTGT----ACATCA--TGGTTTTCAACCATTT------GAGCAGTGTCAGAAGCCACAGTCTTTTAGGAACCCAGATGAGAGATGTGTCCCA-----AGCCTGTTGTGTTGTCAAAAACAGAAGTCC----TGTTTCACAAT--TTAG------ i rn5.chr14 C 0 C 0 s tarSyr1.scaffold_83681 4318 238 + 7872 TAGAAATGTAGATTCCTATTTCTGAGTCTA-CAGGACAATGTCCCCAAAGGT-------------CCCATAGACTCCAAATCAACATTCCACCACAGTCTTGGCTCCTGCTGCAACACTT--TTCCTTTC--CCATTCACCCTGAGAAAGTAACTGAAATGATGATTTCTGTGATCCCCGTA----AGATGTAACTAAATCTTAGCTTTCCGTTTTCATGTGACCAGAAACTTTTGATGTCTCCACACAACTAGGCAGAC i tarSyr1.scaffold_83681 N 0 N 0 a score=1887.000000 s mm10.chr5_JH584296_random 41341 43 + 199368 TGCAAACAGGAACAAAGCCTTGCCCCCTGGCCATAGACACAGG s rn5.chr14 99205680 43 - 115151701 TGCCAGCAACAACAAAGTCTGGACCCATTGTGATAGACACAGC i rn5.chr14 C 0 C 0 a score=6931.000000 s mm10.chr5_JH584296_random 41384 142 + 199368 TCTTGCCACAGTTTTGGCAGACATTTGTTGCAAAAGATATGCTCTTAGGCTCTCTTTTGGCCCTGAGGGTATCCATGAGCTCCTGACAAAGTTCCACAAATCTTTC--TCTGGAGACATTACCCAATGCATCATAGCACTCCAG s rn5.chr14 99205723 142 - 115151701 GCTGACCACATGTATGGCAGATATCTGTAGCAAAGGAGATGTTCTTGGTCTGCCTTATTACCCCGAGAGTATACATAAGCTCAGAAGAAAGTTCGGCAAATCTTTC--TACAGAAACTTGAGCCAAGTCATCATAGCACTCCAG i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 41786 143 + 203052 TCTTGGCACAGTATTTGCAGTGACCAGTGCTCAACATGATGGACCTGGGATGTCCTAGGTCCCTGAGAATCTTTGAGATCTGAGTACAAATCAAATTAAATGCCCCAGGATGGAGAGCTCCCTgggggggTGAAAGT-CTCCAG i eriEur1.scaffold_344782 N 0 I 239 a score=15501.000000 s mm10.chr5_JH584296_random 41526 238 + 199368 AGGGACAGGGTATTGTTCCACATTCATCTTGCTCCAGGTGGCTGTGTGCTGCAAAAGGTCCTTCAGGATGGCCATGGAGAAGTCATTGCTGTAGAAGTTGATCTGGTTGAGCTGAGAGCATTGACTGAGGGCAGGTAAGAGGACAATGAGCTGGGAGTCCTTCATGCTACACCACTGAAAATCCAGAGACTTAAGAGTACCTGCCAGTTTTCCTAGGAGACCTCTCAGAGGCATAAGA s rn5.chr14 99205865 238 - 115151701 AGGGGCAGGGTACTGTTCCACACGGATCCTGCTCCAGTTGGCTGTGTGCTGCATCAGATCCTTCAGAATGGACACAGAGAAGTTATTGCTGTAGAAGTTGACCGTGGTGAGATGACAGCAATGTCTGAGGGCAGGTAGGAGGGCATAAAGCTGGGAGTCCGTCATCTTACACCACTGCAAATCCAGAGTCTCAAGAGTGTCTGCCACTTTCTCTAGTAGACCTCTCAGAGGCATGATA i rn5.chr14 C 0 C 0 e eriEur1.scaffold_344782 41929 239 + 203052 I a score=-799.000000 s mm10.chr5_JH584296_random 41764 3 + 199368 TCG- s rn5.chr14 99206103 3 - 115151701 TCC- i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 42168 3 + 203052 -CAG i eriEur1.scaffold_344782 I 239 I 983 a score=17130.000000 s mm10.chr5_JH584296_random 41767 381 + 199368 AGAGCAAATAGTGTCACTCCTCTGATTTCCAGATTTTTTAACTTAAAAAGGTTGTGACAGCAGGAAAAGGAATCCAAGTCTGTCTGTGAAATTAGGCAGTGAGTGATGGAGAGGGTCTGCAAGGGCGTCCTCAGGCACCTAGGGATAGAGGAGACCAGAGGGTTAGTTCTGGCAAGTGGTGTTGTAAAGGTTTGGCTGGGATGTACACAGTGGTAGAATGAACCAAGTGCCCCAAGGTCAGTTTAAGTAAATGATCAAGGACAACATCTGTGATGCTTCCTGTTGGAAACTGCTCAGTCATGACAATCTCGCAATTCACCCTTGGGCCTCACCCTCAAGCCGAAAACCAGTTCATCACTTAAGCTAAGAAGGCACACAGAa s rn5.chr14 99206106 327 - 115151701 AGATCACATAAGACCACTCCTCTCAAATCCAGATGTTTTAGCTGAAATAGGCTTTGACTGCGGGATAGGGAATCCAAGTCTTTCTGTGAAATTAGGTAGTATGTGATT-------------------------------------------------GAGGGTTAGTTCTGGCTAATGGTGTTGTAGACATTTGGCTGGAATGTAGAGAGTAGTAGAAAGAACCAGATGCCCCAAGGTCAGTTTGACTAAATGATCAAGGACATCATTTATGATGCTTCCTGTTGGAAATTG----ATCATGCCCACCCCACAGTTCATCTATTGGCTTCACTTTCAATCTGAAAA-CAGTTCAACCCATAAATCCAGAAAGCACACAGAA i rn5.chr14 C 0 I 2 e eriEur1.scaffold_344782 42171 983 + 203052 I a score=0.000000 s mm10.chr5_JH584296_random 42148 166 + 199368 gctgggcttgatggcacatgcctttaatgccagcactcaggaggaagaggcaggagggtttctgagttccaggactacacagagaaaccctgtctccaaaagaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaagcaagcaagcaagcaagcaCACAGAAGATTGA e eriEur1.scaffold_344782 42171 983 + 203052 I e rn5.chr14 99206433 2 - 115151701 I a score=18137.000000 s mm10.chr5_JH584296_random 42314 555 + 199368 GCTTCCAACCCAAGAAACCCCTGACAGGATTTTGATA---------AACTCATTGAATCTGCATTCTATCATTCCCTCTGCAGTCATGCTGGCTCTAAGTTTCAGTCCAAGTTATACTCCTTGTCCCATGCACTCAGTGCTGCTTGGGCTCGCTCAAAACATTTCATCCAAGGGAACTGGGCAGAGATAGAAGGCTGTTCCCACAGATCTGAGCATATAGTTCATGTTCACACTGAGCTGATGTGTACCCTGACACCTTACTACACACTCCCCTGCTGGTCCCTTTCCATTTGATTGAGTGGGCATGATTGACGAAGAATTACAACCCATGCTTACTAGAACTGACCTCCCCTTAGATCAAATCACTTCTGTACTCCATGAGTGCTTATTTCAGTTGACTGAATTAACTTGTAAAATTTCCCTTGCATATCTCAGTATACATGGAAACAAGACATAACTTTCAGAGTGTTATGAGTATCTAAAT-TTTGTTCCTAGTGAGTGGCAGGCATTATGTACCACTAATCCTTAAGAGAAGAGAGACAGATTTGCTTTGGTAGCTGAC--------------TT s rn5.chr14 99206435 510 - 115151701 ACTTCCATCCTAAGGAAGTCCTGATAGCATCTCGATATTTGCCATGGGCTCATTGTGTCTGGATTCTATCCTTCCCTCTGAAGTCACCCTTGCTCTCATTTACAGCCAACCTTGTACCCTTTGTCCCATGCACTCAGTTCTACTTGGGATCC----AAAGATTTCACCTATGGGAATTGGAGTAAGATAGAAGTTTGTTTTCTCAGACTTGAGCATATAGTTCAGGTTCACTCTGTGCTACTGAGTCCTCCAAATCCTGGCTA-------------TCATCCCT----------------------------GGAAGAATTACAACCCACTCTTACTACTACT-------CTTAACTCCAAGTCAATTCTCTCATTCATGAGTGCTCCTCTGAGAC-ACTGATTTCATTTGTAAAATTTACCTTGTGGAAC--AGTATACATAAAAA------------TCCTGAGTCCCATTAGTCCTTGAATATTTGTTCCTAGTGAC--GCTGACAGCATTAACCACTAATCTTTAAGATAAGAGAGACAAATTTGCTTTGGTATCTGACCTAGCTCTTCATTCTT i rn5.chr14 I 2 C 0 e eriEur1.scaffold_344782 42171 983 + 203052 I a score=38.000000 s mm10.chr5_JH584296_random 42869 1 + 199368 G s rn5.chr14 99206945 1 - 115151701 A i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 43154 1 + 203052 G i eriEur1.scaffold_344782 I 983 I 115 a score=7464.000000 s mm10.chr5_JH584296_random 42870 114 + 199368 CTTACCCTAGGATCTGATGCAGGTGGTCTCTGAGAAAATGGACACGTTTCATGAAGACATGTTGGAGACAGTTGAATTTGGAAAACTGAGAAATAATCTTTTTGATACACTTGA s rn5.chr14 99206946 114 - 115151701 CTTACCCTAGGACTTGATTCATGTGATCTCCAAGAAAATGGACACAGAACATGCAGAGATGCTGGAGACAATTGAATTTGGAGAACTGAGATATAAACTTCTTGATACACTTGG i rn5.chr14 C 0 C 0 e eriEur1.scaffold_344782 43155 115 + 203052 I a score=192.000000 s mm10.chr5_JH584296_random 42984 3 + 199368 CTT s rn5.chr14 99207060 3 - 115151701 CTT i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 43270 3 + 203052 ccg i eriEur1.scaffold_344782 I 115 I 202 a score=12180.000000 s mm10.chr5_JH584296_random 42987 212 + 199368 TTGAGGCCCCTGTTATATTCATAATAGGGGAGGTATTCTTGTGGAGTGGTGCCAGGAAGACTTTTTCAAGATTTTTCATCTGCCCAAAGTAGGGAGCAAAATGTGCCAGCCGCAACAGAGTCCAGTCGGTATACAGTTCTAATTCTGTAATGTGCTCTGGATGAAAAACATTCATGATTTCTCTGATAACTTTGTCTGGTGCATCCCAGATC s rn5.chr14 99207063 212 - 115151701 CTCTGTCTCCTATTCCATTGCTATTAGAGAACATGATCCTGTGCAGGGGTGCCAGGAAGGCTTTCTGGAGATTTCTCATCTGTCCAAAGTAGGGAGCAAAATGTGCCAGCTCTAACAGAGTCCACTCAGTATGCAGTTCTAATTCTGTGATATGCTGTGGATCAAAAACCTTCAGGATCTCTCTGATAACACAGACTGGTAGATTCCAGACC i rn5.chr14 C 0 C 0 e eriEur1.scaffold_344782 43273 202 + 203052 I a score=-829.000000 s mm10.chr5_JH584296_random 43199 1 + 199368 -T s rn5.chr14 99207275 1 - 115151701 -T i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 43475 1 + 203052 G- i eriEur1.scaffold_344782 I 202 I 70 a score=5320.000000 s mm10.chr5_JH584296_random 43200 89 + 199368 TCATCTTTGTACAGCAGAAATTTATGGACCCCTTTCTCTGCTTGGCCCAATTCAAGAAATATGCTTTTTCTTCATTGAGCTGAGAACTG s rn5.chr14 99207276 89 - 115151701 TCATCTTTGTACAGCAGAAATGTAGGGAGCCCTTTCTCTGCTGGGCCCACTTCAACAAGCATGTTTGTTCTTCCTTCAGGCAGGAACAG i rn5.chr14 C 0 C 0 e eriEur1.scaffold_344782 43476 70 + 203052 I a score=139.000000 s mm10.chr5_JH584296_random 43289 4 + 199368 ATTG s rn5.chr14 99207365 4 - 115151701 ATGT i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 43546 4 + 203052 ATCT i eriEur1.scaffold_344782 I 70 I 5 a score=473.000000 s mm10.chr5_JH584296_random 43293 5 + 199368 ACAGA s rn5.chr14 99207369 5 - 115151701 ACAGA i rn5.chr14 C 0 C 0 e eriEur1.scaffold_344782 43550 5 + 203052 I a score=975.000000 s mm10.chr5_JH584296_random 43298 16 + 199368 TCAACTATGATCTTCA s rn5.chr14 99207374 16 - 115151701 TCAACTATGACCTTCA i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 43555 5 + 203052 -----------TTTCT i eriEur1.scaffold_344782 I 5 I 16 a score=443.000000 s mm10.chr5_JH584296_random 43314 9 + 199368 GACGCTGCC s rn5.chr14 99207390 9 - 115151701 CACGCTTCC i rn5.chr14 C 0 C 0 e eriEur1.scaffold_344782 43560 16 + 203052 I a score=-664.000000 s mm10.chr5_JH584296_random 43323 4 + 199368 -TCAG s rn5.chr14 99207399 4 - 115151701 -TTAG i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 43576 4 + 203052 TACA- i eriEur1.scaffold_344782 I 16 I 25 a score=1252.000000 s mm10.chr5_JH584296_random 43327 18 + 199368 TGCATATCTGGGAAGGGC s rn5.chr14 99207403 18 - 115151701 TGCATATCTGTGAAAGAC i rn5.chr14 C 0 C 0 e eriEur1.scaffold_344782 43580 25 + 203052 I a score=968.000000 s mm10.chr5_JH584296_random 43345 9 + 199368 CTTCACTAC s rn5.chr14 99207421 9 - 115151701 TTTCATGAC i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 43605 9 + 203052 CCTCATTCC i eriEur1.scaffold_344782 I 25 I 2288 a score=6536.000000 s mm10.chr5_JH584296_random 43354 145 + 199368 TTGCTTTTCATCCAAGGTCTCTGCATCAGAGTCACTGTCATTTGCATCGCTCCCTATGTTCCAGAAGACATGGTGCACATTTCTCATGTCGAGAACCTGAAGTTTTGGCCTCCTGTGGGTGAAACTTATGAATGTCAGCAGTCT----------T s rn5.chr14 99207430 155 - 115151701 TTTCTTTTCTTTCAAGTTCTCTGCTGAACAGCTGCTATCTTCTTCTCCAGCCTGTATGTTCCAGAAATAATGGTGCATATTTCTCAGGTCGAGAACCTGCAGTTTTGTTCTCCTGTGGGTAGAATATATGAATGTCATGAGACTCTGAATCAACT i rn5.chr14 C 0 C 0 e eriEur1.scaffold_344782 43614 2288 + 203052 I a score=-752.000000 s mm10.chr5_JH584296_random 43499 7 + 199368 -CTTGATA s rn5.chr14 99207585 7 - 115151701 -TTTACTA i rn5.chr14 C 0 C 0 s papHam1.Contig765910 6445 7 - 7249 TTCTGAA- i papHam1.Contig765910 N 0 I 15 e eriEur1.scaffold_344782 43614 2288 + 203052 I a score=954.000000 s mm10.chr5_JH584296_random 43506 14 + 199368 CATATGTCTAAACT s rn5.chr14 99207592 14 - 115151701 CATATATGTAAACT i rn5.chr14 C 0 C 0 e papHam1.Contig765910 6452 15 - 7249 I e eriEur1.scaffold_344782 43614 2288 + 203052 I a score=-833.000000 s mm10.chr5_JH584296_random 43520 4 + 199368 -CAGG s rn5.chr14 99207606 4 - 115151701 -CATT i rn5.chr14 C 0 C 0 s papHam1.Contig765910 6467 4 - 7249 CCGG- i papHam1.Contig765910 I 15 I 76 e eriEur1.scaffold_344782 43614 2288 + 203052 I a score=1002.000000 s mm10.chr5_JH584296_random 43524 13 + 199368 TCTCCTCCCTGCT s rn5.chr14 99207610 13 - 115151701 TCTTCCCCCTGCT i rn5.chr14 C 0 C 0 e papHam1.Contig765910 6471 76 - 7249 I e eriEur1.scaffold_344782 43614 2288 + 203052 I a score=-858.000000 s mm10.chr5_JH584296_random 43537 2 + 199368 --AA s rn5.chr14 99207623 2 - 115151701 --AA i rn5.chr14 C 0 C 0 s papHam1.Contig765910 6547 2 - 7249 CC-- i papHam1.Contig765910 I 76 C 0 e eriEur1.scaffold_344782 43614 2288 + 203052 I a score=156.000000 s mm10.chr5_JH584296_random 43539 11 + 199368 AGCTTTttttt s papHam1.Contig765910 6549 11 - 7249 AGTTCCCCCCt i papHam1.Contig765910 C 0 N 0 e eriEur1.scaffold_344782 43614 2288 + 203052 I e rn5.chr14 99207625 0 - 115151701 C a score=0.000000 s mm10.chr5_JH584296_random 43550 149 + 199368 tttttttgagacagggtttatctgtttagccctggctgtcctggaactcactctgtagacaaggcaggcctcaaactcataaatccgactgcctctgcctcccaagtgctgggattaaaggcgtgtgctaccatgcccCACACTGCTAC e eriEur1.scaffold_344782 43614 2288 + 203052 I e rn5.chr14 99207625 0 - 115151701 C a score=13046.000000 s mm10.chr5_JH584296_random 43699 425 + 199368 AGTCTTTGTTTTTAAGCACTTTGATATCCAAGGTGGACTCAGGCATGCTACAAAAGCTTTCCTGGGCTTCTGTACACTTGAATACTTTTCTTTCACTAAGGTATACATCatttctattactatttctactactattattattactataataataataataataataatagtaattattattattattattaCTGTGAAGGCCAGGGATAGGCTCATTCTACTGTGAGGCTAAGTCTACTCTAGTCCATATTCAAGTCTAATCCATATCCAAATGTGCTCTCTACAAGTAAAGAGTAGATTTCAAGAACCTTGTATCTCTGCTTGTTTATGCAATCAGAAGCATCTAATAGACTTAGGACAAAGCCATTCTCCCTGGCAATGTCTACTGTGTACTCTTTACGCTCCCATATACAATACTTGGATA-T s rn5.chr14 99207625 369 - 115151701 GATGTATGTTTTTTGGCACCTC-ATACCCAAACTGGACCCAGGCTTGCTTCACATGCTTTCCCAGATTTCCATCCTCTTGATTACTTTTCTTTCACTAAGGTATACCTTATTTCTCCT-------------------------------------------------TAGTCACT----TTATTAGTGGTTGGGGGAATCCCAGGGATATGCTCATTCTACTCTGAGGCTACATTTACTCTAGTCCATATTCTACTATAATCCATATCCAGCCATCCTTAGGAGAAGTAAA---TAGCTTTCATGGACCATGTATCCCTGCATGAAGATGCTATCAGAATCTTCTGATCCATGTATAACCAAGACAACTGCCCTGACACTCTCTACTGTGTAGTCCATGTGCTCTCTCCTATAGTAAGTGGTTATT i rn5.chr14 C 0 I 164 e eriEur1.scaffold_344782 43614 2288 + 203052 I a score=-125.000000 s mm10.chr5_JH584296_random 44124 1 + 199368 G s rn5.chr14 99208158 1 - 115151701 C i rn5.chr14 I 164 C 0 e eriEur1.scaffold_344782 43614 2288 + 203052 I a score=573.000000 s mm10.chr5_JH584296_random 44125 2 + 199368 CT s rn5.chr14 99208159 2 - 115151701 CT i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 45902 2 + 203052 CT i eriEur1.scaffold_344782 I 2288 I 85 a score=5025.000000 s mm10.chr5_JH584296_random 44127 80 + 199368 TACCCGGGGGGAAATTTTCTTGTCAGTCTCCTGTCTACACCATCTAGCAGAGCTTGCAAGGTTTCCAGGTTATGCATATT s rn5.chr14 99208161 80 - 115151701 TACCTGGGGTGAAACTTTCTTGTCAGTCGCATGTCTACTCCATCCAGCACAGCCTGCAACATTTCCAGGTTAGGTGTCTT i rn5.chr14 C 0 C 0 e eriEur1.scaffold_344782 45904 85 + 203052 I a score=-951.000000 s mm10.chr5_JH584296_random 44207 1 + 199368 -T s rn5.chr14 99208241 1 - 115151701 -C i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 45989 1 + 203052 G- i eriEur1.scaffold_344782 I 85 I 231 a score=11883.000000 s mm10.chr5_JH584296_random 44208 232 + 199368 ATCAATGACCCCACAGGGAGATATTGGAAAGGCCAGGCTGCCACCATTGTCTTTATGAGCGAGTTGTGTCTGCCAGCAAAGGCCTCTTGGAACAGCCATGGGACGTACACAGCTGGCACGTTCTCCAGAGGGGATATGGCCAAAGCCTCATCTCTCAGCTGTGTCTGCCTTGCTCGCTTCTGGAGTGTGGGTGGGGTCTGACCACTCATCCTCTCAGGTCTTCAGGAAGAAG s rn5.chr14 99208242 232 - 115151701 ATCAATGCACCCACAGGGAGACAGGGAAAAGGCCAAGATGCCACCATTTCCTTCACGAAGTTGATGTGTTTTCCAGTGAAGGCCTCCTTGAACAGTGCTGGGAAGAGCACAGCAGGCAGCTCTCCCAGAGAGGACATGGCCACATCTTCATTTCTTAGCAGAGACTGAATTGCCAGCTTCTCGAGTGTGGGTGGGCTCTGAACACTCATCTTTTAAGGTCTCCAGTCAGAAA i rn5.chr14 C 0 C 0 e eriEur1.scaffold_344782 45990 231 + 203052 I a score=970.000000 s mm10.chr5_JH584296_random 44440 8 + 199368 GCTCCTGG s rn5.chr14 99208474 8 - 115151701 GCACCTGG i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 46221 6 + 203052 --ACCTGT i eriEur1.scaffold_344782 I 231 I 26 a score=851.000000 s mm10.chr5_JH584296_random 44448 26 + 199368 GGAAGCATTTAGAAAAGAATACATAT s rn5.chr14 99208482 26 - 115151701 TAAAGGATTCAGAAAAGATTGAACTT i rn5.chr14 C 0 C 0 e eriEur1.scaffold_344782 46227 26 + 203052 I a score=273.000000 s mm10.chr5_JH584296_random 44474 1 + 199368 T s rn5.chr14 99208508 1 - 115151701 T i rn5.chr14 C 0 C 0 s eriEur1.scaffold_344782 46253 1 + 203052 T i eriEur1.scaffold_344782 I 26 N 0 a score=9508.000000 s mm10.chr5_JH584296_random 44475 242 + 199368 CAAGAC-AACTTTATACTACTTCCTCACCACCACATTAACCATTTAGTTTCTGAATTACTGCTCTAGAGTTACAGTGCTAGAGACATCAATTTATTTCTGTATCCTAAACTGGTGGTGTAAAGACAGACTCCCACACTGGCATCATGGGAGCCTCTCTAGTACTCTAATGGACACATAATTTTGGGGTCAAAATATTTTTATGTGTTTCCCTTTCTTTA---CAAAGGAAAGAATGAAAGGAAGCt s rn5.chr14 99208509 240 - 115151701 CAAGACAAAGTTCATAAAATTTCCTCACAATCACAACAACCACGAAGCTACTAAGTTCGTGCTCTGC-----CAATGGTAGAGACATCATTTTACCTCTTAATCCTAAACTGTTCATTTAAAGACAGACTCCCACACTGGCAACATGGCAGATTTTCCATCACTCAAATGGGTATAGAATTTTCTGCTCCAAATG-GGTTAAGTGTGACCATTTCTTTAAAGAAAAAGAAAGGATGAAAGAGAGAT i rn5.chr14 C 0 C 0 a score=0.000000 s mm10.chr5_JH584296_random 44717 465 + 199368 gacctgtccaacacgtccagttatttgaggatctcgaggggacctcctcctaataacttaatgggaggtagagagagacgagggccttgtacgagtaaggacacggaaaccgttctgaagttgtatcaagaccccaatgtattgagaaagatccaaggcttaaatgcacaagcaaaaggggaagtacagacacttatcagtgggagggggtgggccaatacagccaaaaggagaagtacttatgggaggggggcaatagaaattctttcttttggcagctacacagggaagcaggaagcttggtggtatcagggtgtggtcaggacatcagtgatgacctagggctagaacatcccatggttctcagaatccatgtgtccctggcccgctcttgacccctttttcttctcggtgggagaggcccaattcagagatcaagagttgtcttaatagctcccaacaGGA e rn5.chr14 99208749 0 - 115151701 C a score=22600.000000 s mm10.chr5_JH584296_random 45182 739 + 199368 AGCAAAatggaagagattcccaggacccagtacagatgatcctagctgaaatatggaacatagaggagatagaacttgaagagg-acaccccagtcgatatgcatggctccctaatgagggaaggggccactcatccatctcaaaaattttaacctagaattgttcctgactaaaggaaaaacagggaaaagagatagttcagagactgaagattaggcgcttgagagactg-ggatcttgggatgtataaaatcagcagacaccaaacctaaacactattgctgttgtcaacat-----------------------atgactgtcctctgagaggctgtgccaccacctgtctaaggacaactgcagatactcacaggcaacc-tttgcattgagcatgtggaccccaatggaagagatagggaaggatttaaggagatataggggattacaacctcataggaagaaaaacaacatcaactaagtggacctctcagatttcccagggactaagtctccaaacaaggagcatacatgagtgggtctatggttcctgataacatatgtagcaaa---tggcttatttc---------agagaggaggctccttgtcc-------tttggaggcct-----actgtcatagtgaagg-gtgaggcaggagtgtgtgggtaggtgggggagtaatgttttagaggtaaagggaaagtatcatgggagggggtttgt-gaggtgaagcctggaagagagataacattttaaatgtaaatatgtaaaattatcaa s rn5.chr14 99208749 780 - 115151701 AGGAAAatgggagagacatccaggacaaaatgtggatgacagtagct-aaatattcaacagaggggagatggaaccttaatagacaagcatcagtggatacacgtgaatcccagttgaaggatggggccactaatccatctcaaaatgtttaacctagaattcttcctttctaaaggaaaagcagggagaa-aaatgcaatagaggctgaaggaaaggccattcagagcctatctactttgggatccatcccatcaacagaaatcaaactgtgacagtattgccaatgccaagatgtgcttacagacaatagcctggaatggctatcctctgagaggctgttcca-gacttgtttca-gacaattgcggacactcttaggcaatcaatttggctgagc-tttggaccaccatgggagagatagggaagaactgaaggagctgaatcaccttccaacccctaaagaataacagaaatattaactaactcaaccacgtggagctccaaaagactaag-caccaatgaaagag----tatgagtgaattcatcgtttcagataa-atatgcaacaaaaattaccatatgttgcaacaatgggaggggaggctcttgatccagaggaacttgtagccccagggaagtgggatgctagaggtgtgagggaagagtgggtgggcagatgtgggagcacctcattagagtaaaagtggagggagtttgggaggagagtagtcaaggggaaaccaagaagggggataacttctataatgtaagccaatacaataattaa i rn5.chr14 C 0 I 7 a score=0.000000 s mm10.chr5_JH584296_random 45921 111 + 199368 AAGGGTGGGGTGATgagaaggaagaatgtgatgaggaacaaatggcagaccaggaaggaaataatgactggactgtaaaaCTAAGTTGAAGAGAAATTGAATTTAGTAGTA e rn5.chr14 99209529 7 - 115151701 I a score=1456.000000 s mm10.chr5_JH584296_random 46032 32 + 199368 AAAAAGAAAAAAAAAAAGGACAAACAACACAA s rn5.chr14 99209536 32 - 115151701 aaaaAGAAAATAATGAAATACAAACAACCAAC i rn5.chr14 I 7 I 1900 a score=10545.000000 s mm10.chr5_JH584296_random 46064 377 + 199368 AACAACAAAGACAGACCAGCAATCAaacaacaacaacaacaacaaaaacaaACAAGGAAAGAAACAATAATACAACCAAAAAGTTCCTGTGTTGTATAACAATATTGAATTTCCAGTAAG--GAGGATAACATCTGTGGGTTCCTACCAAGACTGTCAGGCTCACCTTGGTTCCAAAAGCAGACGTTATCCAAAAACCACAGCTATGTGAAAATGATCTAAAGCAAAGACTAAGGTAAGACATTTGAGTAACTTACAAATGTAATTCCAGCTACCAGGATGATCAGAGTTAAAGATGATCAAAGTTAC--------------------ATGAGCTAGGGACTCA-CAAAAAAAAAAAAATCATCATTTCAGTGAAAGGAAATATGAAAGACCACATTAGT s rn5.chr14 99211468 381 - 115151701 aA--ATAATGAAATacaaacatccaacaaacaagaa--ataaaataatcaaataagcaaacaaccaagaaaagaaacaaaaaaCCTCC-TGTTGTGGATCAAAATTGAATTCCTCTTAATCTATGGATGAAAACAGTGGGTTCT----GAAATTTTCAGGTTTTCCTGGGTCCCAAAA-CAGACCGGGTCCAAAAACAA-AGTTATGTTAAAGAGATGAAAAGCAAAGCCTTAGGTAATACATTTGAGTAAATCACAGGTATAATTCTAGATAT--------TGTGAGTTAAAGAGGATCAAAGACACAAGGTCTCCAGGTCTCCAGTATGAGCCAGGGTCTTAGCAAAACAAACACAACAAGCATTTGTGAGAATGGAAATATGAAGTAATATGCTAGT i rn5.chr14 I 1900 N 0 a score=45881.000000 s mm10.chr5_JH584296_random 46441 991 + 199368 CAGAATGATCT-GAT-TTCAGCTAACCCAGAGCAACACGCCCAACATCTAAGAAAATT-------------CTTGTGTCAAAAAATATATATCAAGCACAGTAATGAAATATACAAGTTATCTTAGAGATATAGTGGAGATGAGGCTAAAACGTCATCGGGAATAAAATCCAAGGTCTTCAATGTGTTTTACTAAAGAGACAGAAAATGAAATTTCCTGTACTACCCCGGAATCTAAAGGGTTTCAAATCAAACTGCTTGACCCTAGGGAAACCAATTACATACCAGTTCTGAGTACTGCAGATAGGTCTCTGAGTCCTAGACAACCCTGGTAGTTACCCAATCTCCAGATCT--GAATA--TTTTCTGTCTCCACTGAAGCCT----------CTCTGAATAACCCTTCCTATTGCAGCCATGTAATTCAACTTCAAACTAGAATTAGATTGGATGGTTAAACTCTGCCCTTTTAATTCTATATGTAACATCCAGCCATTTCATTGATTGCACCAGAGCTCTCAATGAGAATACCTCCATAGCATACCATACCACTCAAACATTTCACTTGTTACTTAATAAAACATCGCTGAATTTGTAGATTTTCTCCTTCATTTGCCTTATGATTACATAGTTTTGAGGTTGCTACAG---GATTgggtcttgctgtgaagccagggttgtttctaaactctaagttctagcaatcctcctgcctcagcatagttcttgctgctaggattaatgttgagaaacaccacacctggGCCAATTTTATTCATGTGCACAAAGTCAGTCTGATTT-GCCTCAGATCAGGGTTTAATCTATTGATGATCATAGACAGAAAATAATTCATCGATATTATTGTAACTGGATCTGGGACAAAGAGTTTTTAATAGACAGGAGTATGTTCTGGAGCTCAAGGCCTGAATTGGATGTTTTTTCAATAAACTGCAGTAGCACCTACATAAATGTTAGAGGAAGGAGCATTGTCTGATTCCATTAACATTGTCCAAGTGTGC s rn5.chr14 99052325 1001 - 115151701 CAGGAGGATTTTGATATCCAGCCTACCCAGAGACACACGGCCATT-TCTAAGAAAGCTTGAATAAGGTAAACTTCTTTCCAAAAAT------CAACCACAATAATGAAATCAACAGGCTAACCTAGATGT----TTGAGATGAAGCTAAACCTTGATTTGGAATTAAATCCAAGGTCTTCAATGAGTTCATATAAAGAGACAGAAATTAAAATGTGTTATCATATCTTGGCATCTAAAGG--TTTACATCAAACTGCATGACTCAAGGGAAACCAATTACATACCAGTTCTGAGCACTGCACAGAGGTCTCTGAGTCCCAGGGAAACCAGGCAGCTATCCAGGCTCCAGGTCTCTGAATAGTTTCTCTGGCTCCACTGGAGCCTTTATATACCTCTCTGCCTGTCCCTCCGTGTTGCAGCCACGCCTCTAAACC-CAAACTGGAACTGCATTAGTTGATTAAGCTCCACCCTTTGATTTCTATACATAACTCCCAACCACTTCATTGATTGAATCAGAGCTCTGTGTGAGAATACCTCCACACAA--CCCTGCCCCTCAAACATTTCACTTGTTGATTAACAACACATCACTTAATATTTGGATTTTTT---TGATTTGCTTACTTATTACATAGTTTAGAGTTTTGTATGAtgagactgggtcttgctcttaagttaaggtcattttagatatttaagttctagcaatcttcctgactcatcatccttcttcctgataggattactgttgtgaatcactgcacctggGCGAATTTTAGTCATATGACCAAAAACAGTCTGATTTTGAGTCAATTCAGCTTTCAATCTGTTGCTGATAATACAAATAAAATAATTCATAGACATTATTGTGACTGGATTTAGAACA----GTTTTTAACAGTAAGAAGTATGTTCTGGAGATAGAGGCCTGAATTGGACGTGTTTTCAATAAACTGCAGTAGCATCTCCTCAAAAGTTAGAGGGAGGAGAATGGCTTGATTCCATTAATATTTTCGTAGGGTAG i rn5.chr14 N 0 I 7608 a score=14219.000000 s mm10.chr5_JH584296_random 47432 536 + 199368 TGGGTGTGCACTCAGTGTGTAAGGAGCTACCCAGCATACAGCCATTCCTCTCTCCAGCACTGTATGCAGcagacataatg-gctatgcctggaaactcaacagttcaagagttgaactgttgaagccggggaatcaattcaaagctgtcctcagccttatggtaaatagaaggacagcttgagct-tacatTTGAGTCTACTTC-TAAATAGACCTAAAGGCAAACAGAAATTGGAGGGTCTGAGGGAGATGTTGCCTTTGGC-TGACAGAAAACAGATAATGTGTCAGGTTTGATATGACCAGAATGATTTGCCCA---AGATGAAATCAGGAGTGGGACATGTGCCAAAGAGTCTGCTCCACAATAATGAGCACCTATTAATACtctattctgaacacctacgtggtggcttgaaatgatctgtaactccagtgtc-cggaaacctgaaaactccatctgaccttcttggacatcaggcgttcatttgctgaacattcatacattcaggaaaaacaccaaaacatggagaacaaaaCGTTtt s rn5.chr14 99060934 528 - 115151701 tgggtatgtattcagttgatagggagctattcagtatacctggagtcctctccccaactctctatacatcacacatgatgaggcatgctgctcagctc---------ataattgaaagttggaggtaggaggctcagttaacagtcatgttcagccaaattgtaagctgaagaatagcaggacctctaca---aaaccTGCTTTGTAAATGGAC--AAACACAAAGATAAA-AGTAGGGTCTGAGGGAGATGCTGCCGTTGATGCCTCAGGGAACAGAAAGTATGTCAGGTAGGATCAGCCCA-ACTGCCTTACTCAAGGAGGTGAAATCTGGAATGGGAATTGGGGTGAAGAGTTGGTTCATCCAGAATGAGCACCTGTCAATTttctattcccgtcacctacagggatgcttgagtaggtctgtaactccagttccaccaaaatctgaaacccctttctgacctttctcagcaccagacatgtgaggaatgcccatgtatatttgtaggcaaaagaaccctgcacatagaataaaTCTTCTT i rn5.chr14 I 7608 C 0 a score=0.000000 s mm10.chr5_JH584296_random 47968 177 + 199368 ttgttttgttttgttttgttttgtttcaagacagggtttctctgtgtaggtctggctgtcctggaactcactgtgtataccagactggcctcgaactcagaaatctgcctgcctttgcctttcaagtgttgggttgggaataaaggtgtgtgccaccactgccaggctAAATCTTTA e rn5.chr14 99061462 0 - 115151701 C a score=12293.000000 s mm10.chr5_JH584296_random 48145 495 + 199368 AGAGAATTAAATTTGTAAAAggaatggtggcaaacacctttaatccctgtactctgtaggtaaaggtaaactgggcacagtgagttcaaggctagttttatctaagcagataattcttaaccagtgaagcctaaggactaagggtctgttttacaaTTAAGGCAGagcagggtggggtagcacctgactttaatcccagcaccctggaggcaaggggaggagctggatctt--tagaccccagactgatctacagattaaagtgtgggacagggagggctccaaaatagagaaacactctctcaaaac--ccaaaccaaaCCAAATAAAAACAAAATCTAGTTAGGTGAGAGATGCTACAATAGgcctttaatctcagaagtaaggaggcagatgtaggtggaccttggagtttcagcta-gtctggtctacaatttgagttctgggtcagccatgtctgttaaacag-aaactctgtctgaaaaaaactaaaAACAAAAA s rn5.chr14 99061462 487 - 115151701 AAAACAGAAGATCTATgttgggaatgttggcacacacatttacttcctccactcaggagtcaatggttgactgatt-cggtgagctcagggctagcattatctaaataattaatttgtaaccagtgaagcctgtggagtgaggctatgtcttaaaattaaacCAGagctgggcaggg-ggcacagaatgttaatccctgcactgaagagacagaggcagtgagatattcgtagtgtaggacaaactggtccacagaggtgcttgtgggatagccagggctcttaaacaatgatacccaatatcaaaacaatcaaacaaaCAAAGACCCAAACAAAGTATGGTTCATgcagtggttcaggtacatgccttaaacctcgca---------gtagaatcatgtggacctctgaggtcaagatctgcatgatgaacactgtgagttcagg---aatcttagcttttaaacagcaaactctgtcaaaaaacaaaacaaaacaaaaa i rn5.chr14 C 0 N 0 a score=16251.000000 s mm10.chr5_JH584296_random 50234 375 + 199368 attgaatttatgtgttctgcaaatatcaggtattctgaaAATCTCCTAATCCTAGAGATTTTCTCTCTGCCCAGGAAACCCTGATCATCTCTCCATGTCCACTGATCCTTCCTTTCTCAAACC-TGCTCCGACT-TTTTAGAATCATTGATGTTATGCCTCGCCCTGACACACTTTTTAACTTGTTTTGAAAATATTTTAATATAGAACAGGTTTGCCTCACACTATCTATTACAG-CAAAGATACCATTGGATTTCTGAGCCTCTATTCAGACTCACGTGTTCTGGGAACacaggcatgcc-ccatttgtctagatcatgcagtgatttataac---cttaattgtgaatgccaagcaaggactgtactactggagtcaca s rn5.chr14 99212031 373 - 115151701 ATTGAATTTAGGTGTTCTGTAAATATGAGA-GTCCTGAA------CTAATCCTAGAGCATTTCAAGATACCTGGCAACCACTGAGCATCTCTCCATTCCCAGTGATCCTTCACTTCTGAAAACATACTTCAACTGTCTTAAAACCATGGATGACATGTCCCTCCCTGACACACTTTATAAATTGTTTTGAAA--ACTTTAGTACCGTATAGGTTTGCCTAACACATTATATTATAGCCAAAGATGACATCATATTTCTCAGTCTGTACTCACTCTCACATGTTCTGGAAAGAAATGGATGTCGCCGTCTGTCTAGATCATGCAGTGATATATAATCTACTCTTTTGTGAATTCCAAGCAAGGACTTTATTCCCTGACTTACA i rn5.chr14 N 0 N 0 a score=2186.000000 s mm10.chr5_JH584296_random 72178 78 + 199368 TTTGTGTGGCTCCAGTGTTGTTCCCTAATGCCACACAATGAAGAGAGGATGTGGAGTACCAGGTGTGTCCATTGAGCT s xenTro3.GL172666 3658412 72 + 4262873 TCTGTCTGTCTCCAGTGTTATGCCCCAGCTCAGTACAATGGATTGAGGATG------AACACatctatctatctatct i xenTro3.GL172666 N 0 I 81 a score=0.000000 s mm10.chr5_JH584296_random 72256 93 + 199368 CAGTTAGTGAGCATAGCCTTGACTGCTTTGGCGTCCAGTTTCAGGCCTACAACATGGATGTGTAAAAGTATACAAGGGGTTTGTATTAGGACA e xenTro3.GL172666 3658484 81 + 4262873 I a score=7974.000000 s mm10.chr5_JH584296_random 72349 145 + 199368 CTGTTCATCAGActatctgtttgtctgtccatctaactaggtatctatgcatcca--tccatccatccatccatccatccatccatccatccatctatctatctatctatctatctatctatctatctatctatctatctatcctat s xenTro3.GL172666 3658565 145 + 4262873 ctatctatcaatctatctatctatctatctatctatctatctatctatctatctatctctatctatctatctatctat-catctatctatctatctatctatctat-tatctctctatctatctatctatctatctatctatcatct i xenTro3.GL172666 I 81 N 0 a score=60990.000000 s mm10.chr5_JH584296_random 76048 1392 + 199368 TAAAATATATAGAGAAA-AAATGGTCAACATTGACAAACTCCTAATTTCCTCTTCCTCACTCTTGGAACAGTAGTTCAAACTCTGGAGTCCAGAGCA---CCCTATACAGCTCACCAACTGAGGTCAATGCACACACCTGAAACTCCATGTGCTCTC----TTGAGCCATGCAA----------TCAACATCCCCATTTTAAATAATTGAGCCATTTTTAATTTCTTCGTGAAATTGAGTCATTACTtttttatttaaagacttctttggattggtgtgtagcttcatgtatattatgtggatctgtgcttgtgaaagccaggatccacacaacccagaaaagagggtcctatcacctgaagactgagtacctgtcaagtgcaacctgattattagcactgaaatcaaactttgctcctatgcaaaatcagcatgtatccttaagctgtgagcaatctcttcaTA--TATGGCTTGTTTCTTTAAAGAACttaaatgcat---tattatgagcaaacctcagatgagttcactggtcccaaggaacaaggccagagaactgaacattcagacagggagacaggttgtggggaaagacagaaagaaggaacctgagagaggTGTGTTGTT------TGTTTTTTAGTCTTCTTCTATCCCTTAAGCTGGCCTAGATGTCCA--TGTGTACCACCATAGCTGATAACTTTACCCACCTTCCAAAGATT--GAATTGTGACAGGCCTGGCATCAATGTGTACATTTTGACTTATCTCCAGAGGGCATCTGTT-------------TAGATATGCTATTCAATTCAGACAGTAA---------------------------------------------------------------------TACTTTACCATACAGAAAGGGGT-ATAATGACTAGGCAGAGGGAGATTTTTGTTTCTTTTATTTTTATTGCAACTGAAG-ACTTAAAATACAAGTCTTTTTGAAAGTAAATACTTTATGTAGCAAAGGTACCTGCATAATAGTGGGCACCTTTTTATACACTATGGTTACTTCATAGAGTTTGGGACTCCATAGGAATAGATCTCTAGAGACATGTGGC----ATAGACTGTATATAGAGGTTCTTTTTAGTAAGCTCATTAAGGCATGACAAAAAGTTCAGGAGTTCAATGCTAGAATGGAAAGCCTGTTTACTTTGCTCTATGTTGTCTTCTTACCTTTAGGCATCTTTGAGGGGTCCAAGGTGCCTTGTGGTCTCAACATACTGGATATTAACCATCTGTGATCATTTTAATCCCTCTTCACAAGATTTGTGTCTATGTTGCTCACATTAATGTAAATGTTTTGTGCACATAACTGATCAGCCACCCAAAAGTGTTATACATGTAGCCCAGGCAAGAGACTAGGGAAAGATGTGTCAAGAAAACTTTTATTT---TATACATGCCATATTCACCTGGAACTTTGCTTCCTTCATAAAATAACAGTGTCTTTCCA s rn5.chr14 99080959 1498 - 115151701 taaaatgcataCAGAAATAAATGTTGTATGTTGACAAAGTCCTCATTTCCTTTCACTCATCCTTGGTACAGGAGCTCAAACACTGGATACCACAGCAAATGAGGACACTGCTCACCAGTTGAGCTCAGTTGACACACCTGAAACTCCACATGCTCTCAGCACAGAGCCACACAACTGCAACTGATCAACACCCCCATTTTAATTAATTGGGCCATTTTTAATTTCTTTGTGAAATTGAGGGATTTTGTTTAAATATCAAGAATTCTTCAGCTAGGTGTAtatttgcctgtgtattatgtaggtttgtttatgtgatagttggtatccacaattgccagaaaagagggttttatcacctgaagcctgagttccagttgagacccacctgattataagctcacatatcaaactgtggtcctctgcaacagtaacatgtgctcttagcctgtgagcaatctctcTCAAACTATAAGTGATTTGTTTTAGGAatagtaaagcatgtttactgagggcaaatcttaggtgagttcactggtcccaaggaataagtccagggatctggacatacagagagaaagacaggttgtaggtgaagggagaaagaaggagcctgagagaggTTTCTTGTTCTTTTTTGTTCTTTTGTCTTCTTGTGTAC---------AAATAAATGTCCACATGGGTTCCAATTTAGCTGATAACTTTATTAATCCTCGAAAGAGTATGAAATGTGATATTCCTGGCATCAATGTGTTTATTTTGGCTTCTCTCCAGAGGGCATTTGTTGAGTCCTTAAATTTAGATCCATTATTCAATGTAGACAATAACAATGATATGTAAACAGAGAACTTATGACTTATGTGTTTAATAAACACAGTGTATAATAATTTTATTGATAGTTCACTAAACAGTAAGGAATTACAATGACTAGTCTGAGGGTGAATTTTTCTTAGTTT--------TGCAAAGAAATTGTTTAGAATAAAATTCTTTTGTAAAGCAAATGCTTTATATAGTAGAGGGACCTGCATATTATTGGACACCTTTACATACACTTAGTGTACTACATAGAGTTTGGGAGTCTGTAGGAATAATGCTCTACAGACATGTGGCTGTAGTATAAAGGGCATAGAGGATCCTGCTAGTAATCTCATGGACTCATGACATAAAGATCAAGAGTAGACAGCCAGACTGGAAAGCCTGTTTACTTTGCCCTGGATTGTCTTCTTCCATTTAGGCATCTCTGAGGGGTGCAAGGGGCCTTGTGGTGTGAATGTGCTGTATTTTCATCTTCTGTGGTCCATTTAATCCTACTTCACTGGAGTTGTGTCTATGTTGCTTACTTTAATTTAAAGGTTTAGTGCACTTAACTGCTCAGCGACACCAGAGGGTTGTAAATGTAGCTGAGG-AAAAGACAAGGGAAAGAAGTGCCAAGAAACCTTTTTTTTTTATATACATGTCAATTTCACACTGAATTTTTCTGCACTTGTGCAATAAAAGTGTCTTTCCA i rn5.chr14 N 0 N 0 a score=11284.000000 s mm10.chr5_JH584296_random 85453 183 + 199368 CTTCTTTAGATGACATTATTGTTGTTTAAGTAGAATAAAGTATCTAAATTGAAGGATTCTGCAACAAATGCCCTCTGAGATGAGTTAAAATGAACACATGGATGCCAGACGTGTCAGGATTCAAAATCTTGAGTAGGTGGATAAAGTTATCAGCTAAGGTAGTTCACATATGGATATCTAGGT s rn5.chr14 99218888 183 - 115151701 CTTTTTTAGATGTCATTAATGTTGTTATATTTGAATAAAGTATCTAAATTAAAGGATTCTGTAACAGGTACCATCTAGGGAGGGTATAAATGAACAATTTAATGCCAGGCATGTACGGATTCAGAATCTTGGGCAGGTGGATAAAGTTATCAGTTAAGGTGGTTCATATATGGAAATTTAGGT i rn5.chr14 N 0 I 1448 a score=0.000000 s mm10.chr5_JH584296_random 85636 16278 + 199368 TGGCCTTTtgccacatcacctccagtaaagatctgtgtgacaatttccacagactaaggcatttgacttcaaaagggggaggcctcctggaaccagttgtgaaattcctcacaggagaaaaattaatgagccatagttctcgtatcagttttatgttttctattccttttcctatatacaagatgttcctaatagcccaggccaagatcttaagtattttttttaagattttttatttatttattattatagtaagtacactgtagctatcttcagacacaccagaagagggagtcagatcttgttacagatggttgtgagccaccatgtggttgctgggatttgaactctggacctttggaagagcagtcaggtgctcttacccactgagccatctcaccagcccaagatcttaagtattatggttacaaaaccatctcttgaaatggaatcactaaacatgacctcatctcttggaaaaccaggacttcactttataaatcacgtataagatagtagtgataaatataaactttcccaacaataatattatatgtgtctgcatgtgtgtcatcagaagtaggttttggaatcttgtttaagaaagtcttaaatagaattaaaacagtttatgttttgaagaattacagaagaacaggaactagaggttaacagtacctgatcataaaaactcattagcttgttcttgggaatttgccagtatccctagatgattttgtattttgatgtataaaatgattattgtacatgattatgattattgtaaatgattatgtctgttctattttgctgcttcactgaatacagcttttcagagctgtaacaccagtttctctgttgattgagagctgcagaatacagtcagattcaaactgcctctgtgtttgtttctgtttgtcaccaccaaatccttacccacctgactttgagaatccaatcccagggactctcctacccagctgtagtggtttgtggcaGCCTGTGGTAAAGAAAAGTCATAAAAACAATATCTATGTCTCTCAGCTCCTTTTATCTTCCTCCACCCATACCTTCTCCCAGTTTGTCAACTTGACAGGCCTTCTTACTTGGAATCTGTCAACCtgctttttgcactttctttgactgctgtgtcaatgttttctatggtatcttctgcacctgagattctctcttctatctcttgtattctgttggtgatgcctgatctctttcctaggtttttaaacgccagggttgtctccctttgtgatttctttcttgcttctatatccatttttatatctgggatggatttgttcatttcctccacctatttgattgtgttttcctgtatttctttaaggggtgtatgtttcctctttaggggcttctggctatttacctgtattctcctgtatttaagggagttatttatgtccttcttacccgggcctagcaaacacagaagtggaagctcacagtcaactattggatggatcacagggaccccattggaggagctagagaaagtatccaaggagctaaagagatctgcaaccctatcggtggaacaacattatgaactaaccagtaccccagagctcttgactctagctgcatatgtgtcaaaagatggcctagtcggccatcactggaaagagaggccgataggtcaggcaaactttatatgccccagtacaggggaacgccagggccaaaaaatgggaatgggtgggtaggggagggggggagagggtgtgggggacttttgggatagcattggaaatgtaattgaggaaaatacgtaattaaaaaaaaagttctttatcatcaccctgagaagcgattttagatttgaattttgctctatcagatgtgatggtatatcccagacttgctattgtgggagaattgggttctgatgatgccaagtaaccttggtttgtgttgcttatgtttttatagcctccagctatctgattatatctagagctacctgcccttgctatttactggagcttgtccttcttgtgatcctagttgtgtcagaactcctcagagttcagctttctctgtgatcctgtgattctgggttcctgaagtcctaggatcctgaattcctgaggtcctgtgtgtgtcagaactcctggaagtcaagctctctctggaaccatgccatcatggtgtgaccaagctcctgggaccctgaggacctgggcatgttagagcgtctgggagtggatttttttctgggtattgtggggctggcttctgagttcacacccaaggtctgctcagggcccactggcccagattggaagaaatccatgccactggtcagatggagttcctgggttccccgggtcccattcgtctcagttacttcaggtgttggggcagattttgtgtcctcctctatgatcccgggagtgttaacaccttggagtggatcttctctgggtgttgtgggtttggctgtggagttcacaccccagttctgctcaggacattggcccagactggaaggaactggtgccactggtcaggcagagctctacatttgacttttcaacagagactctaaaatatagaagggcctgaactgaacagatgtcttgcatcttttatgagaccacagatgccaatgtagactactatccctagcagaactctcagtcaccatagatggaaaagatattccaagtcaaaagcaaactttaaaaatatctattcaacaaatctagacctacagaaaattttagatgaaaaacttcagcccaacaggttaactacaactttaaaaactacaggggggctaaagagatggctcagcagttaagagcactggctgctcttccagaggttctgagttcaatttccatcaaccacttggtagttcacaatgatctataaggggctcttatgccctcttctggcatgtcggtgcaaacgcatcagagcactcatacataaaaaaaataataaCAAAATACAATAAAATCATCCATTTCATGTAGATTAAAAAAAACAAACGGAAAATAATTCCATTACAGAATAACCAAAATAAGGGAAGTCCACACAATCACAACCTCTAACACACCagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaaagagaaagTaagttgattgctgaactttaccaggtccaaggggggcaagttcttcatacttcctgcttctcaaaaatttatatcatactggtcagaagacttaagttggatagtccaattttatatagaaaatttgggtagttctccatgtagactgctgtctgtttttttttttttttttcaataattttagaagttgcttactgtgcaagcacactaaagttatgttccttatcaaatctcgaatgaggtggagcactagatgcttttaatctcacaattaacctgaagatattttagattaagcaaaatgctttaaaaagataattttaggtctaagtagattttttttcacgatgacaactgcaagctatgatagaaaatgacttaagtacaggactctgaactcaaggagagagcatagatagtacagtacattctccaatgttggataatacaagtggactggatattatgcctaattcttacctgatacgttttgataactttttcatcattgttcctattgtatagtttgttatatggataaagcctttttttggactaaaggtgggagaTTttggaggaggatattgtgctttgtgtactcagatgatgatttctgtatcctgagaactgggtacagtctaggcacaggcattgtcaagagtatttatccatctcctgtatctttgtggtgtaaaaatgctccccaattatccctggttggttaatgaaaagctgacttgatgaagacttgccttagtcatgctatctcttcaaagcaatggaaaccctaaGATAATGATATTTAAAATGTTTATGTTTgggcctcagagatgacttggaggttaagagcattgtttgctctactagaggtcctatgttcaattccccacaagcatatggtggcttacaaccatctataatgagatctggtgccctcttctgccctgcaggatacatgcagacagaatgctgtacacattataaataaataaatctaaaaaaaaGTTTAAGTTTTCTATTACTCCTAATAGTAACATGTGAGGTCTCtgtggtaatactaactactgggtcgaactgactgatgcctctatgccaggagattctccacaaacagtggacaatttcagttgacagctgtgttctacctagccagggttgccactaaacagacaactattaccccaaattacctttggactacaaacctctcaggatatacaagttctgagtgcatatactgacatgatcattttaaagaggtcaaaaataatactaacactgccacctaaaaccaagctggacaattgtggaaagcttggctaaattagattcattattgtaaaGGGTCTCTATCATTTCTAACCAGATTTATAGGGCATGCCTATACTAATTTTCCCAGAGTTAGAGCCTCAGTCAACTAAGACATCTGGACATGATTTGTGTCCAATTCCCTTTATATATGAAGCTTCTTCAAGCATTTAGAGAATGTAGTAGATACTCTGCAGCCCCTGGACTTTCTGGAATGTGAGATGACAGACTCAGATCAATGTCCTCCTACTTGTCCTCAGCCAATGCTCCTAACTTACCAATGGCAAATTCTATGACAAGGAAATAAAATATGGACAAAAATGAATGTTagagctgaactagaggatcaagaaaaaactttagaatccatggaatttcacatttggcacaatcacaatgggtgtgccttggagaggcagagccctgaaggctgtgtcctgtggacttcatgctgttatggagttttgctctgcttcttgctctcatgcccctcctaatctatgagttctatgaaatctctaaggaagcttccagccccttgcctggtagtatcattggcacatacattaatagtgaatgatcttttccaaacatggcttcacagcagattaatggtttaaccaccaccctcagaaaggacttagagctgtagatttttattaatgtcaaccaaccttagaaagagttgaaatggtggttgttaataaagttagcttaagatgttttgctagtggctttgatgtataaaatattactgagcaCTATCACAATTCCCTGCCTCCTGGCCCCTCTGAGCAAACTCAGTGTTAGGGAGTTCTGACACTGCAATCCCTGAACCTTCTGCTGTCTATTTCTTGGTCCACAGCTAGCTCCTCCTGCATTCTTGGAGGCCTGGCACAACCAGGCTATATTCATAAGCCTCAagccccacctcagaggctgacattatatctttaacaaaattatagaagaaaatttatttcccctaaaggaaaggatgcctataaacatacaagaatcttaaagaacaagtagtagattggaaaaaaaaatccttctgccacataataatcaaacactaaacatatagaacaaagaaaagaatagtaaaaggtgatagggatgaaggccaagtaacataaaaatatagaattacaggagaattcttagaggagactttaaaagccataatggactggggagatgtcttacagtctctaagagatcacaggtaccaacccagagtattatacccagcaaaactttcaatcatcatggacagagaagacaagatactccattacaaaacccaatttaaacaatacgttctacttatcctgcaagctagtcttccactagcagccttcatataaagatgtaaaattctcagctctgtctggatgctaccatgctcctgccttgatgacaatggtttgaacttctgaatctctataccaacctcaaccaaaACTTTGccaggggcagatggtttttagtgcataattttaccagactttccaagaacagataatatcattacttgtgtgctctttccccagccttgagcaggataaacagatcttgagtgcttgccacaatgggttttacaacctaggtggacttgtctgcacctgcaatttcctacaggaacttagaggaatagactgccttctgtgctttctttgcaacatattccagctgaaacaaagaatgaggtctgtgggctttccctgtataaacaaaatgctgaatattaaacttggagccttgatcagaaactttatcttcgcttcatccttctcttgcattccatccattatcatttccaggcaacccagttcttccatggctactggacaactacaaatacccctcatgctattccacaatgtagaaacagaatgaatattgccaaacctaatctatgaaggaagagtcaccttgatacctaaacaacacaaagcctcaacaaacaaagaaaatttcagacacctttcccttatgaacactgatgcaaaaatactcgatatgatattagcaaacagaacccaagaagacatcaaagtcacaatccactatgataaagtaggcttcataccaaggaagcagggttgggttaaaatacaaaaatgcagccaggcatggttgcacacacctttaatcctagcacttgggaggcagaggcaggcaattttctgtgttcgaggccaacctggtctacagagtgagttccagggctacacagagaaacactgtcttgacgcaccccccacccccaaaaaatatacatcaatgtaatctaccatataaacacaccaagggaaaaaattacatgctattgagaaagactttgacaaaatccaacatattatattgaaagacttggagagatcagggatacaaggcatagaaaaaaaaaataggatataaattggaaaagaggaagccaaagtattgctattcacagattatataataacatatgtttatgagtccaaatatttttcagagaaatctgatagctgataaacatctttagtaaagtggctggatagaaaactaatttaaaaaatcagtatcctgcctttatacaaatgataaatgggatgaaaaaggaattaggcaaacaatgcccttcacaacaatcacaaataatatatctttgtataaccaagcaagtgaaagacctgtatgacaagaacttcaagtccttgaagaaagaaaatgaggaagacatcagaacatggaaagatcttccaggctcacagattggtaTCAATGTCTAACTCATTGGGTACCAAGGGTAGAGTTGCATTAATCAGTACACAGGGGATGCATAGTAACAGTGTGCCAATGCATAGTTTATTGAGCATTCAATCATCTTTATAGGCAAGCAGAATAAAGTTTTCCTACAGCTTCTAATTCTCAACAGCTTCCATATTCCAAGCAATAACTTATCTAGGTTCATGGTGACCCAAACCTCCTTGCTGTGTGAGAAGTCTTTCAGTGGCCCACCTCTTTTAAGTGTTGCTTAGTTTAATTAAAAACAAAGTACATTTCTAATGAGATAATAATGGCCATGAAGGCTACTTCCTCAGGCACACAGCTAAATTGGCTGAACATCAGGGTTCTCTGCTGAGAAAGAATGTCTTTCCCATGTTCCAGTATGCTGAGATTAACAGAAATCCTTAAGTCACCTTGCAGATAGCAGGCTGGGAGTCATACCATTTTTCTACAgatcagtaggattaacatagtgaaaatggctaccttatcaaaagcaatctacagattcaatgcaattcccatcaaactccaacacaattatttacagaccttgaaagagcaattctcaatttcatatgaataaacaaaaaacttaagatagttaaaacaatcctggacaatgaaagaacttctggagttatcaccatcccttatttcaagtggtattactggtactacagagcagtagttatataaactgcatggtggtattgagacaaacaggttgatcaatggaagtgaattgattatccacacccatggtcccttgatttttgacaaagccaagaccagacaatggaaaaaaggatctttaacaaatggtacttgtctaactcaatgcctgcatgtagaagaatgtaaatagatccatatttatcaccctgcaaaatactcagtccaagtgggtcaaagTTCCAGTATGTTGCTTCCCTGAATCCCAGTGTCCTCCACTTGATGCTACATGggtcatgttacatataaagggagacctattgaaattacacccaacttctcaaaggagactttatatccagaagggccttggcaaatgtcttacagcagaaactacgaatggctggcccagacaaatatacccaggtaaaactttgcatcactgtcgatggtgaaaacaagactttccatgagaaaacaaaatttaaacaatatttatctcgaaatacagccctacagaagatactagaaggaacacttcaacccaaatacagtaattccacaccagcaaaaccaaaagcatgggaacacacacacacacacacacacacacacacgtgcacacacacccatcaccgacatcaaaataggaattaccaatcattagtcatcaatatctctcaacatcaaggactcaattttcaagtaaaaagacacagacagaatggatgtgaaaagaacatcctgcattctactccatataataaacagacttcaacaacaaagatagacattaccttagagtaaaggtctcgaaaaagattttccaagcaaacaaaccaaaaaagcaagttagtgtagccatcttgatatttttacagattttcaatgaaaattattgtaggacacttcatagtaaaaaaaaaatccattaagagaatgtttcaagtatgatcatttatgctccaaatgcaaagcacacacaaacataaaacaaacttttctaaagttaaattcaaacctggagtatcacacattaatagtgtgatacatcaataccccactttcactaaaagacaagtcattgagacaaacagtaaacagagaaataatgaaagagatgtatgtttcaagtggacataacagatatctacagaccctttcacccaattacaaaggatatgccttctgctcagcacctcatggaacattcaccaaattaaacatgtaattggttacagggaaaacctaaaaagatataagaaagttgaaataaatttctgtgtcttatcaattactataacaatagaaacaacagaaaactaacaacctcatacgagctgaacaactctctactcaatgatcactgggtcaaagaagaactaaattaaaatcttttgataattcagtaaaaatgaaggctgaacatatcgaaacttatgggacacagagaatacagttctcagaggtaaattcataacactaagtatctttataaagaattagatttctcatactagcaatttaatactacacctgaaagccctagaaagaaaagaagcaaacacatccaatagttgtagacaatagagctgaaaccaatcaattagaaacaaaaagaacagtacaaagaatcaagcaaacaagttggttttttgagaagaccaacaagacagacaaatctttagtcaaactaacaaaaggcagagagacactacccaaattaacaaaatcagaaatgaaaataatgacaacaggcaccaaagaaatcattaggttttacttcaagaacttgtactccttaaaactggaaaatctaaatgaaatggatgattttcaaggcaaatgcaacttacaaaagttaaaactcaatgtcaagttaaatgtctagtcctataacccctagggatatagtagtagtcattaaaaatcactcatccaaaaaattcttagggtcagatggctttagtgcagaactttaccatacttccaaagaagagcttatgccaataatcctcaaattattccatataatagaaacaaaaggaacactgacaaactcattctaagaccagagtctccctgttacttaacttataaaaagcctcaacataaaggagaacttcagattaacatcccttatgaacatttatacaaaaatactcaataaaatataggaaactgaatccaagaacacatcaaagacataatccaccataattaaataggcttcatcccagggatgcaaggagagttcaacatatgaaaattcaccaatgtatttcaccataaatacaaccttaaaaatatcacaggaccatctatatcactgtatgataagaaagcctttgacaaaaacagcctattatgttaaaagtcttaaggttatcaggatacatgttggatatgtaaacatagtagaagcaacatacaacaaaccaataggcaacatcaaattaaaaagagaaacctaaagcaatctcagtaaaaccagcaacaagtcttcccactctctccctatctactcaacacagtacttgaaattctagctagagcaaaaactaaaggatttcaaggggacaaaattggaaacgaagaaaaagtatcactagtcacagatcatatgatagtatagataagagatctccaaaattctatcagagaattcctacaactgataaacaccttcagcaaaatggctagataacaaaactcactgtaaaaaaaaataacccttttttagacaaatgataaactgacttagaaagaaattatagaaacattaccctttataatacttacaaaatatcttggtgtaactctactcaagcaagtgtaagacaccaatgacaagaacttcaagtttttgaagaaagaaaattgaaagaaattggataaagaaattgaggaagatatcagaacatggaaaaatctccacatacatggattggtagcctcaatctagtgaaaatagctgtaataccaaaagcaatctacagattcaatgcaattcctgtcaaaatcccaacacaattatttacagacatggaaagaactattataatcttcatatggaaaaataaacaagataattaaagcagtcctgtataataaaagttctggagtcatcaccatctctgacttcaagtggtagtagagagtaatagtaataaaccttgaatcattggtatcaagacagagaggttgatccaaattgaggacccagaaataaaccactacaattattgatattggtttttgacaaagaaggcaaaaccatacaacaaaaaagaaaagatcttcaacaaatggtgctgttctaactggatgtctgcatgtagaagaattcaaataggtccatatctatcaccctacagaacactccagtccaagcggaccaaaaacctcaacctaaacctagatacattaaatataattaaaaagtgggtaatagctttgaatccattagtacaggagacatcttcctgaaagatccaacatctcagtcactaagatcaaaaagtaataaatggaacctcatgaaactaaaacatctcctgtatggaaaaggagatttttgtcaaggacagtggtcaaaaggataaaacagtagcctagagattgggaaaatatctccaccaaccttccatctgaaagagggctgatatccaaagtacctaaagaactaaaaaaggtagacactaacaaaccaaatagcctaaattttaaaaaggggtacatagctaaatagaattttcaacagaggaatatttaatgaccaagaagcacttacagaaatgctcaacatccttagtcatcagggaaatccaaatcaaaatgactctgggatttcattttacaccctttagaagggcaacagttcatgctagctagggtgtggagcatgggaaacactctcttcctttgctgataggagtgcaaacttgtacaaccagtctgaaaataaattcagtgctttctcaaataattggaaataattatctctgaaatgcttataccactcctggtcgtatactcaaaagatgctgcgtcataccacaagaatagtgttttaactatgtgcagttttattggaaatagccagaaacttgaaacaacccaaatgtccctcaactgaagaatggaaaatgaatatatgctacatttacacaacagaatactactcagctgttaaatcaatgacatcatgaaacttgcaggctaaacccagactcataaagacaaatgtggcatgtactcaggagtgaattgtaaccataaagtacaggataaccttgttatccagaggcttaaagaaactaagaagaaaggtccagcagaagatatttgaatctaaataagaacataaataaagtacacttcaggagtagatggatggagggaactatatgtaagggaaattctggacagtaaccagagtcgtcacatatggtgaagatgaagcgagagagaagtggaatctgtgactgcggagaatatctgagatgagctagataactaggacaatggaaactccctggaatctatgagagtgagtgaccctagctatgacttcttgcaataggacctatggaacatgaaccagtcacttcttgtaattaggcaagtcttctgatggagacaacaactcacccacaaacttttgacacacaaattttcctgcttataaatatgcatggataaagaagcagcagaaattgcaggaatgcctaatgaatgactggcccaatgtgagacccatgccatgagagaaacaccacccctgatgttatagtaacaatagtgtggatatttacagacaggagcctagcttacatgccatctgagaggcttcatccagcaccacatagaaacagatgcagagacccactgcaaaacattaggcagagcttgaagaatatgtggaagagggggaggtaagattgaagaatcagataagtcaaggatacaagaaaacctacaaattcaaccaaccttgccccataggggctcactgagactgaattaccaaccgaaatgcatccataggatagaaataggctccctacacagatgtaagagatgtgcaccttgttctttccatgggatccctaatagcagggccaggggctaactgcctttggatccctttcccctaacttggctgccttttcttgccttaatagaaaaggatgcaactagtccagtgaaacttgatataccaaggcaaatccattggaggcctccacttctctcgggagaaatgaaggggagtggagggaagggaggtgagagggagtgactgggaagacagggagggaaagctgcattctggatgtaaaataaataaattaataCATTAATGGAAATCATCTAGTCTCttttctcctattgggttcccttgtacagccttggggcctttgtcttgccttgttttgttgtctctggctttcatccctttgaaacctgctttttttctgaagagaaaacaaagggggataggatatggggagggaggtatatattgacagggagttgggaggagtagaagaggaaaatgtgctttagatgtgtcatatatattatagaagaataTTCTAAaaaaaatccattcccttttaaaatacaaaaatctcctttcaaaattcaaagtctctcaagtttgggctcttgtgaaaatcaaatgtcaaaaaaggagagaaccagggcacagtcacaatcagattagagccaacctcaatggcaagagtataatgtactcaatgtccaatgtctgggtactaccctgtctcttcttggttccttcaaagggcttggatcacttctccactctgtcctgtatagcacacagagcttgtcttctaggctcaggctggctccattccatatctgctgttcttgttacttatgcctaggtactgcatctccaactcaactgggtctctcaactgggtagcactttcacccatagcctttcctagaccctaagactccaagactccagcactgctttccagtgccaagcttcacctgttctccccttagtaacttcaaaaacagcaccaccagggtgattctttcactaccgagttcacctgtcaaccttggaataaagcttctttggattctgaaagaacactttccagatgaacttacctcaataatgctggtctattatctcagctgattcttcagccccagctgacctgttgatatttcaggaaatcaaaggtttcactttacttgttctggtgacttgttaatcaagagctgattcttaagctaaaatctgaactatgaagacttaactcaaatgactcagtagtgtcttggctttcctctgaagcatttcaagccatgcctcaatcatctgtactgctctcaatgctcttaccttccaacatcctacagaacacctagctcagatctcctcactcaatggattttctagtccaaatttccaaagtccttccacaatcctccctaaaacatgatcaggtgtgtcaaaacaacagcccactatgccagtaccaGGTTATGTCTTTGGGATTGTTTGCTGTGATGAAccaggtccatgagcccaggtgtggaactacccacaatgggctgtgcccttccccattaatcactaattacgaaaatgctccacaggcttacctatagcacagtcttatggaggcatattccctcctctcagatgactctagccagtgtcaggttgtcacaaaacACACACACAtctctctccctccctccctccctccccccccctctctctctctctctctctctctctccacacacacacacacacacacacacttatacacaatcacacacaAATTCCAACCCAACAGAATTTTCTCTTATTGGCAACAGAGGAAAACCCCTCTTCAAGATATTTAATGTATTTTTCTATAAATTTCTCTTATCTATGAGAATTTCACTTTTCTCTAATGAGTCTATGTTTCCTGAATGCTGACAAAAAGTAATTGAAATAAAAGTTTAAATGTAGATActagacatgtagtgagtttcaggaaggcttgtctagcatgctttgagcactcttcatcaccacacgctgttaagaggatacggttcttggacttgtgtcccaccacttaggaggtagaggcagaaggtctctgctgctcaaactaatctaagatacatatatatttctggggtagcctggagaccatgtttcaGCTTAGCAAAAACTAACTAAGTAATCAAACTAGCCAGAAACACTAAAATGAAACAGAAGATTCTTGAGTAACAGCCTGTAATGTGAGCCCCTGGGAGCTGAGgctggatttggtgacacatgccaatgactcaagtattcaggagacagggacaggtggatttcaggttccaaccactcttagctacatggtctgttccaggccaatctgggcaacatagcaaaatgttgtctcaaaaaTTAAGACTTACAAATTATCAAAGAAAACACTCAGTTAAAGATAAAACTGAATTTGGGTTTGAAACAAATCTCTAATCTGCAAATCTTGGGTCAGAAATTACAGTACTTTGTGCCACCTAATGTCCTCAGCATGGAGTGGCAGGGTGGGCTGCAGAATGCAGGTGTTTAACTTACCTGAGGTGACAGTGTTCCTATTGCAAGCAAGGACAGGCTGAAGTTTTAGGTTCTAGAACTCTGAAAGTTTTCCTGACTCCTCTGGAGCAAAAAGCCACTTTCCTCCTCACTTCTCCTCTTCACCACCACAGATCCCCCCACAATCTACAATTTGATTTGATGggaaggggtaaatctcagagaaccccacctctagttcaaaaattgcagttaactaagggctgctgagtgaggggggaattattacaaaaacctgagcctcctaattgctgtgcagttccaggtggttgtacttgaaaacacatatacaaagtaaagagtaaataagactcagcacgttgtagttatatatattaggcatctatacacacacccgtaagttcatgtgtgtaTGTGTAATTTTGTATGTGTATTGTTACTGGAAGTGATCCCATGATGTCTCACAATGCAATGCTCAGGTTCTTTGTGTCATGAACAAAGAGTTAACATTGACACATCAATCCAGGGGAGAAGTGGAGTTCCTCTTGTTGATAAGAAAACAATAAGAACAACCACCCCCCCCAATACCAAGCaaacaatacaataacaacaacaacaacaaaacaaaacaaaagaaaacCAGACaaaccatctctgatctttaagggaataaaacatactttattcttgtgccaaataggagtagcaatgttctgaaaaaagatttactttacacga e rn5.chr14 99219071 1448 - 115151701 I a score=4790.000000 s mm10.chr5_JH584296_random 101914 104 + 199368 aatttcatatttgaacataaaagcagtttcatgaagttcttatggtagcaactcaaaaaagaaat--cttaaatcaattcttagatatatcggtAAAAATGTAAAA s rn5.chr14 99220519 105 - 115151701 aatatgatctttaaataTGAA-TCATTTTCATGAATTTCTTATGGTAATAACTCAAAGATGTTTTAATTTAAAGCAGTTCTTAGATATATTGGTAcaaatttaaaa i rn5.chr14 I 1448 C 0 a score=0.000000 s mm10.chr5_JH584296_random 102018 891 + 199368 ATATTTACattggatggatccccgggtatggcagtctgtagatggtccatcctttcatcccagctccaaactttgtctctgtaactccttccatgggtgttttgctcccaattctaagaaggggcaaagtgtccacactttggtcttcattcttcttgagtttcatatgatttgcaaattgtatcttatatcttgggtaccctaagtttctgggctaatatccacttatcagtgagtacatatcatgtgagttcttttgtgattgggttacctcactcatgattatgccctccaggtccatccatttgcctaggaatttcataaattcattctttttaatagctgagtagtactccattgtgtaaatgtaccacattttctgtatccattcctttgttgaggggcatctgtgttctttccagcttctggctattataaataaggctgctatgatcatagtggagcGCAAaaaggacccttatatagctgtctcttgtgaggctatgccagggcctggcaaacacaaaagtggatgctcaaagtcagctattggatggaacacagggcccccaatgcaggagctagagaaagtacccaaggagctaaaggggtctgcaaccatataggcgaaacaacaatatgaactaaccagtacccctggagctcatatttctagctgcatatgtatcagaagatggcctagttggccatcattgggaagagaggccacttggtcttgcaaattttatatgcctcagtacgggagaacgccagggccaagaagtaggagtggagggggaggggagagtggggggagggtctggggaactttttggatagcatttgtaatgtaaataaagaaaatacctaattaaaaaCTaaattaaaaaa e rn5.chr14 99220624 0 - 115151701 C a score=24678.000000 s mm10.chr5_JH584296_random 102909 491 + 199368 tatttacattgctggaaatgttattgtgtatggtttaaaaagctgaaaaatctctcatatcagcctcaaattccatctgagaacattctaaa-gtttttgattggtgg-gactggtgtttttaatttaatatactataagattttaaaaaatctattacggtattaggtcctgttttatttgttagtgacaggatgttaagtgggacatgttgggagag-caaggcatggctatttaatatactaatgcttccccaagtctactgcatctagtttcctgcctgaagcattccatcttccctatgtcagtgaatgccagtcagccagtcagcctctgaagactcagcagcttcctgggaatCCCTTCGTGGCCCTTCTTACTGAGATGAATTACATTAAAAAGAATTGAAAATGAAATTCAGAAGGAAGTGTCTATATCATCTTATTAGAGTCTGAGAAGAAGAGAAGCCAGCAGTAAATCCAAGAAGGTACCAG s rn5.chr14 99220624 484 - 115151701 tatttacattgatggacatgttagtggtt----tcaacaaagctgagca--ctctcatacttgtctcagatggcatctgaaaacattctaaatccctttgattgatggtaattgggaacttaactttaatacattataaagtttgaaaacatcttttagtgcattagattctgttttaattgttagtgacaagttgttcagtgggacatgtggggagagacaaggtagagttatttaatgcactaaagcttctccaagacagcaatgtccagtctcctgcctgaggcattccatcttccccaagtcattgaatgccagtcagccag----cttctggaaactgagcaccttcccaggaattccttcacaGCCCTTCTCACTGAGCGGAAGTACATTAAAATGAATGTGTGAAGAAATTCCGAAGGAAGCACTTGTATCATCTTATAGGAATCTGAGAGGAAGACAGGTAAGCTGTAAATAACAGAAGGTACCAG i rn5.chr14 C 0 C 0 a score=0.000000 s mm10.chr5_JH584296_random 103400 1050 + 199368 ATAAGAtgaaaaccagtctggcagttcctcagaaaactggacatagtacttgttgcagacccagtagatccagcaatacctctcctgggcatatacccagaagatattccaactggtaataaggacacatgctccactatgttcatagcagcgttatttataatagccagaagctggaaacaacccagatgtccctcaacagaggaatggatatagaaaatgtggtacatttacacaatggactactactcagctattaaaaacaatgaatttacgaaattcttgggcaaatggatgtatctggaggatatcatcctgagtgaggtaacccaatcacaaaagaaatcacttgatatgtactcactgataagtggatattagcccagaaacctagaatacccaagatacatttgccaaaatacaaaaaaaaaaatcaataagaaggaagaccaatgcatggatacttcattcctccttagactagggaacaaaatacccatggaaggagttgcagagacaaggtttggagctaatatgaaaggatggaccatccagagactgccccacccaggagtccatcccataattagccaccaaatgcagacactgttgcatatgccagcaggtttttactgaaaagaccctgatatagcggtcccttttgaggctatgccagtgcctggaaaatatagaagtggttgctcacagtcatctataggatgcaacacagggcccccaatgaaggaactagagaaagtacccaaggagttaaagaggtctgcaaccctataggtggaacaacaatatgaactaaccagtatccccatagctcgtgtctctacggcatatgtatcagaagatggactagtcggccatcactgggaagagaggccctttggtcttgcaaactttatatgccccagtacaggggaatgccagggcaatgaagtgggagtggagtgggtaggggagcagggtcaggggaggtttaggggacttttgggatagtatttgaaatgtaaatgaagaaaatatctaataaTTCTTTTT e rn5.chr14 99221108 0 - 115151701 C a score=4375.000000 s mm10.chr5_JH584296_random 104450 102 + 199368 TTAAAAAAGAAATTAATGAGGAAGAGTCATGTCTTTACAGTTAGGGGCAGCAGTGGAGGTTTGCA------ATAGAAAAAGAATAGAAAAAGGCTGTCTACAGAAGAA s rn5.chr14 99221108 104 - 115151701 TTGAGGAAGGAGATAAGGAGGGAGAGTCATGTCTGTATAGTAAGGGTCAGCAATGGAGGTCTGCACACACGGTAGAAAAAGA----CAGGTGGGGGTCTATAGAAGGG i rn5.chr14 C 0 I 31281 a score=59127.000000 s mm10.chr5_JH584296_random 104552 1325 + 199368 AATGGCAAAAGGCCCAGAATATTTCAGCAGGCATGTTTAGAATTTACACAGGTCTTGGGAGGGAGAAAGACTACATTTACAACTTTGAGTTGGAACCAAGGCAACAGGCTAGTTTGGCAGTGAAGATGACTGACCAACTGGTAG---TAGGGAAGTGTAAGAACAGGCGCTCATTATGGGGTTGATCATTCTTCCCATGTCCTTGGAATATCTTCAGGTGAACCAGCCCTCCTGTGGGATGGTCTCCTTTGTGGG---------------------ATTAACTCATAAGATAAAGGGATAATATAATGTAATGTTCTAATCTTTGGTGCAGATTAAAATGACAGG-TTCTTTCAGGGTCAGGTGTATAACTCAACTCTCATATTCTATGCCCAAGAGAAAGTAACTTTCCTTTAACATCTGTTAAGAAACCC-AATACCTCTGCCTGATTCCTAGTAAGACCAGTGACACttgctgtgaagaaat-tcccaaaggaagcagttttacctggaaaaggatcttcgttgtctcaaagttcaagggaatactgtccatcattgaaaggaggacatggtgtcaagagtgagaggtaagtggttaggatatgtgcaccgtcagg-----------agcagagagtcatagtcagtttgcactccctttcttattctcttatgacaccagcacatgggatgatgatctcagcctatgaaacagcacctccacattcagattggagcatctg-caaaaacctctttacacaacgccatcaggtatatttccttgatgggtctaaactgcaccatagtgacaaagttaaccattaTGTAAATGTTTTTTTTTCTGTTG---TTGTTTGATTGGttttggttttgg-acagtttctctgtgtagctttggctgtgcttgaaacctgcagacaaggttaccctacaatactcagagctctttttacctctctgccttatgatgctggta--ttgaaggtatgatccaccaggcccagcCCCATAAATGGCTCTTAGCACCCAGAGTAGAACACTACAAGTTTTCAGTGAAGTTGGCGAAAAGGTACAAAACTGTGGCTAAAGGCATTAAATATGTCCAAGAATTTGCTCTTTGAG--CCCTAGTGAGTCAGCAAATGGAATCCTCAAAGGTGAGAGCAAGTTGTGCTTTCTAGTAACAAATATTCAAACTACCACACCTTCAA-CTTTAACTCAATTCAGAAACTAACTCTCCTGAATTCCCAGGGACCTCTTTCTTAGGTGGTTAGAGCCTGTCTAGTTGAGAGATGATCTCTTTTGCCAAAACCTTATACCTCATCCCAATGCCAA----AATATCTACTTATCTAATTTTGGTGTTTAGGTTCt s rn5.chr14 99252493 1353 - 115151701 aAAGGCAAAAAGTACAGAGAATCTCAGCAAGCACATTGAGAATTTACACAGGATTTGGTGGGGAAAA--------TTTACTACTTTGAGTTAGACTCAGGG-AACAGACTGATTTGGCAGTGCAGAGAACTAAGCAATTGGTAGGGGTAGGGGAGTGTAAGAACATCATCTCATTAAGGGGTTAATGACACCTCCCCT---CTTTGAGAATCCTCAGGTAAAC--GCTCTCTTTAGGCATGGTATTCTTGGTAAAGTGATTGACAGGTCCAGTTTAATTAACTGGTAAGATAGAGGGATAATGTAAAGGAATCTTCTTAACTTTGATACAGATTGCAATAACAGGGCTACCCCAGCGTCAGAGGTCCAAACCAGACC--ATATTCTATGCCCAAGAGAAAGTAACTTTCCTTTACCTACTCTTAAGAAACTCTAATTAATCTGCCTCATCCCTAGTATGGGCAATAATACttgctgtgatgaaatatatttaaggaatcagttt-acatgtaaaagg-ttttccttgactcacatttcaagggaatactgttcatcactgtaaggataacaaagcggcaagagtaag--gcaactggtcagcatgtgttcataagcagggagaagagaaaaggcaagggtcataatcagttttccccctctttcttattctcttattaccccagcttatggggcgatgatcttattctatgaaagaccacctcattattccaagtatagcatctgtccaatggctcttcacacaactctgtcaggcatgtttccttgaggggtctaaagcgaaccaaggtgacaatgttaaacattataTAAATTTTTCTTTTGTTGTTGCAATGGTTTGAttgttttgggttttgatgcagtgtctctgtgtagatttgcccatccatgaaatcttcagaccagctaggtctacaactatcacagctctgcctgcctgtctgtctcaggatgctggtanattcaaggtgtgctccatgaaccccagcCCCCTTAATTTTTCTTAAGACCCAGAGTAGAATACTAGGTGTTTTCAGTGAAGGTGAAGGAAAGATGCAAGGCAGTGATGAAAGCCATAAAATATTTCCAAGTAGTTGGTATCTCAAGACCCTTGAAAGTCAGGGAATGGAATACCCACAGGTGAGAGCAAGTTGCACTTTTTAGAATGTAGCATTCAAACTTACAAACTTTCAAACTTTAACTCAATCCATAAACTAAGTCTCCTGAATTCCAAGAGGCCTCTCTGTTAGGTGATTAGAGCCTGCCTAATTGACATTTAG----TTTTGGCAAAACTTTACACCTCCTCCCAATGCCAATCACAACATCCACTGGTCTACTTTTGGTGTTTAAGTTCA i rn5.chr14 I 31281 I 2 a score=0.000000 s mm10.chr5_JH584296_random 105877 482 + 199368 gtattagtcagggttctcaagagtcacagaacttatggatagtctctatatagtaaaggaatttattgatgacttacagtctgcagtccaattcccaacaatggttcagtagtcgctgtaaaaggtagcccaaggatctagcagttactcagtcccacagggcaagcaggcaaaggagcgagagcgagaatcccttcttccaatgtccttatatggtctccagcagaaggtgtagtccaggttaaaggtgtgttccaccacacctttaatcccagatgagcttgaactctgagatctccctgtcttattcttctggaatccatagccactatgcctcaagatctccataccaacatccagataaaaaatttctatctcccagcctccagattagggtcactggtgagccttccaattctggattgtagttcattccaaatatagtcaagttgacaaccaggaatagccactacaGGTTCCAA e rn5.chr14 99253846 2 - 115151701 I a score=6180.000000 s mm10.chr5_JH584296_random 106359 116 + 199368 GTGATGGCTAAGCATGTTTAt-ggatttagaatctgtatggaaatccacctgagaatgtttcctaaaacctgtgactgagtagaaaggtgaaccaacttaaatgggagtggcaccat s rn5.chr14 99253848 117 - 115151701 gtgatggctaaattggttgatgggatttagaattgctatgcaaactcacacgtgactgtttcttaaaacctgtgcctgagcaggaatgtgaacttactgtaatgggagtggcatcat i rn5.chr14 I 2 I 22 a score=0.000000 s mm10.chr5_JH584296_random 106475 408 + 199368 aaatggactaaaggccagaactgaatttgtgaggagtgggtgtggcagcagtcccaagatggtgcccgggacttctgtcaagtcttatgaactttctcatacacctgaaaataagccacgaccatcgtgagaactgcacacgtgcactaagatgctgggggtgtaaacaagtccatatttggtggagacgtgcccctgccaccctaattggctgaagctgcgtgcctggtgaggtgatgcagcctgccgtgagtggatgggggctgagagtatataagagtgagaggcccggggtttgggggagagagatgaagagggagagagatgaagactgaagcttgctgaataaactgctgtgagaagaactggtggccatgtcgtttttgctggttgagggcagatgcgaca e rn5.chr14 99253965 22 - 115151701 I a score=11432.000000 s mm10.chr5_JH584296_random 106883 248 + 199368 tgaattaaagagagaaatcaagctgaataccacattc-----tctcttcttcctgttaggatacactgtgaccaggcctctcctctttccagaagtcttttcccacaataccatgctg--cagcatcccaagaacagtagg-tgaaggaaactcctttctctcttgtttcttgtgagcgttctgatgacagcaTTtgtttttgcagctactaatgttcagagcctgaggcttgatagacctaaaaagtcagatgtg s rn5.chr14 99253987 245 - 115151701 caaattaaaaagaaaaatgaagctgagcaccacatttatctgtctctgcttcctgtttggatgcactgttaccaggtctctcccct-----------ctttcccacaataccgtgctggagagcatcccgagaacagttggctaaatccaactcgttgttaaggtgattcttgtgaggtttctgatgacagcaaTTGTTAGGGGAGGAATTAAGGCTAAGAGTCTGAGACCTGATTGACCTCAAAAGTCAGGTGTG i rn5.chr14 I 22 I 19 a score=0.000000 s mm10.chr5_JH584296_random 107131 2437 + 199368 gtcactcttccccagtaagtcagttaTCAAGTAAGTCATCAGGACCTTGGGCCCGAACTCAGTGGACAGTCTTACCGACTGTCCGATTCTCTacccccaccccaggtaccctagcatgcccaggatcttaggatcactggtgagtaggacacaacatctgttcaaagagaaccgggagtgcctggtcccaggtggagcacagacacaggaaccccactgaccagtgtctcaggttccttcaggtcagctgtggtctatattggttttgaactcagcagacagccccactgtccccagaggaggtacaacttccaggcactctaacacccaggatcccaggatctcaggagcttggtcatatcaggatctcagggtcacaggatcacaaagaaagctggactctgagaagttctgactcaactgggattagaggaaagacaggctccaatcagataattgagggcaggagcacttgaaataatcaaatggcaagaggcaagcataagaatagaagcaacagaaaccaaggttacttgtcatcatcagaacccaactcttccaccatagcaagtcctggatataccatcacaccagaaaagcaatatatggatctaaagccacttctcacaatgaaaatgaagtacataaatacataagtacataaatagctcccttaaagaaatacaggagagggctggagagatggctcagcagttaagagcactgattgctcttccagaggtgagttcaattcacagcaaccacatggtggctcacaactatctgtaatgcaatctgatgccctgttctggtatgtctgaagacagctacagtgtactcatataaataaaataaatcttaaaaaaaagaaatagaggagaacaatatccaaacaggtaaaagaattaaacaaaaccatccaggatctaaaaatggaagtagaaaaaataaagaaatcacaaaagaagacaactctggaaatagaaaacctaggaaagaagtcaggagccatagatgcaagcataacaaacagaatacaaaagatagaagagagaatctcaaatacagaagataccatagaaaacattgacacaacaatcaaagaaaatgagaaatcaaaagagatcctaacctaaaacatccaagaaatccaggacacaatgacaagatcaatcctaaggataaaaagtacagacgagaaggaagttttccaacttaaagggccagtaaatatcatcaacaaaattgttgaagaaaactttcccaccctaaataagagatgtccatgaacatacaagaagcctacagaactccaaatagttttggaccagaaaagaaattcctcctgtcacataataatcaaaacaccaaatgcacaaaacaaagaaagaatattaaaagcaataagggggaaagatcaagtaccatataaaggcagacctcttagaattacaccagacttctcaccagagactatgaaagccagatgatcttggacaaatgttatgcagacactaagaaaaaacaaatgccagcccaggctactacatccagcaaaactctcaattaccgtaggtggagaaaccaaagtattccatgccaaaaccagattcacacaataccttttgacaaatccagcccttcagaggataataatgggaaaacaccaacacaaggatggaaactacatgcctttaatcccagcacttgggaggcagaggcaggcaaaatacccaaggtacaatttgcaaaacatgaaattcaagaagaaggaagaccaaagtgtgtatacttcttcttagaagggagaacaaaattaacatggaaggagttacagagacaaagttcagagctgagactgaaggaatgaccatccagaaactaccgcatctgggaatccatccaataaacaaccaccaaacccatacactattgcagatgccaacaagagcttgctgataggagcctgatattgctgtctcctgcgaggctctgccagtgcctaactaatacagaagtagatgctcacagtcatccattagaagtagcacagtgtccccaatgaaggatctagaaaaaggacccaagaagttgaaggggttagcaatccccttggaggaacaacaatataaactaaccagtaaccccggagtcccctggcactaaaccaccaatcaaagaaaatacattgagggactcatggctctagctgcatatgtatcataggatggcttagttggtcatcaataggaggagaggtccttggtcctgtaaaggttctattccccagtataggggcatgcctgggtcaggaagtgggagtgggtaggttgggaagcagatgtagggggagaggataggggtctttttgggggggaaaataggaaaggggataacatttgaaatgtaaataaagaaagtatctaaaaaaaaaaGT e rn5.chr14 99254232 19 - 115151701 I a score=21698.000000 s mm10.chr5_JH584296_random 109568 417 + 199368 AAGTCTTCAGAACAGCAGATA-TGAGTTGACTGAGCATTTATTTGGTGGGCAGGGGTCTAGAACAACGTTTTTA-TAATATCCCTGGTTATCAGGGCAGAAATGCCAAAAGGAAGCATTGGTTCTTTATCTCCTGGGTGAACATTGTTGCCTGAGGACCATATGGGAGAATGTGATCAAAAACACAGTGCAGACACAAATCCCTTCTGGTGAAGAGATTTTAGAATCAGATACTAAAATTTTAATGAGTTTAAAATGAGTTTTATCAATTGCACTATTTTCTTCAGTGCATCTACTAAATcagtggttctcaacctgtgtgacaggacacctttgatataccatattaaatatcctgcatatcagatatttatactacaattcataaccatggaaaattacagttaaaaagtaaccatg s rn5.chr14 99254251 413 - 115151701 AAGTTATCAGGACAGGAGATAATGTGTTGACTGAGCATTT----GGTGATCACGGACCCAGAACAACATTTCTAGTAATGTCCACAGTTATCAGGCCAGAAATGCCAAACAGGATCACTGGTTCTTGATCTCCTGTGTGACCATTCTTGCCTGAGGGTCATAAGGGAGTGTCTGACCAAATCTCCTGTGCAGACAGAAATCCCTTCTGTTGAAGACCTTTTAGAATCACATAGTGAAATTTTAATGAGGTTAAAATGACTAATATCTGCTGCCAAATTTTCTTCTGTCAATCCATTAAATCATTGGCTCTCACCCTGTGGTTCAGGACTCTATTgaagtcccatattaaatatagtgtatatcagacaattatattacaattcataactatc--aaattactgttaAAAGCTAACCatg i rn5.chr14 I 19 T 60546 a score=2888.000000 s mm10.chr5_JH584296_random 109985 78 + 199368 aaataatttttttggtcggggttcccacaacataagcaagtacattgaagggt-cacagcattaagaagattgagaccc s rn5.chr14 99194118 76 - 115151701 aaataattttat--gttggggacactaaagaatggg-aagtgcattcaagggtatgtagccttaagaaggttgagaccc i rn5.chr14 T 60546 I 60578 a score=0.000000 s mm10.chr5_JH584296_random 110063 390 + 199368 actgGTGTAGACTGTCTTCCCCTTTCATCCCTGCCAGGATAGTCACAGGGAAGAAGCTTCTAGGCTAGACAGGGAGGTGAGAAGAGAGTCTGTCCTGTGGACTGCATCACAGCTCTGGGAACTGTGAAGTGCAGGAGAAACACCAGGATCTAGGATAAAAAACAAAAAAGTCACAGAAATCGAAGTCATAGGGAAGGAAAGTGACTTTTCCAAACCACAACTTAGTTCTTATTGGGGTTGTCAGTCTGAAGATAACACACCTCAATTGGGGCTTGTAGCAGGAAGGAGGTTGTTGAAGTAAGGGTATTATCTCTGCTCAAGAACCCCGAAACCAGGGATTTCTGGACTTGTAGACATAAGATGGGAAGAGAATGTTAGCCAGTTTATTAA e rn5.chr14 99194194 60578 - 115151701 I a score=5624.000000 s mm10.chr5_JH584296_random 110453 137 + 199368 CAATTGAAACGCTTTTTGTGGGAGATCTTGAGGTCACAGCCAGTCATAGGTTTGAACCAAGGAATTGA-TGCTGTAGAATTGTAACCTCATGTCTATAACAATCCTGAGGGCTGAAGGTTGGGTAAATTGAGGCTTAt s rn5.chr14 99254772 138 - 115151701 caataaaaaCATTTTATAGGGGAGGCCTTCAGGTCACAGCTAATTGTGGATTTGAATGAACAATTTGGGTGGTGTTCGATTGAAACCATATTTCTAGTACAGTGCGGAAAGGTGAAGGTTGTATAAATTGGGGCTTAT i rn5.chr14 I 60578 I 1 a score=0.000000 s mm10.chr5_JH584296_random 110590 7590 + 199368 tcttttcttttattagatattttcttcatttacatttcaaatgctatcccaaaagtcccctataccctcccccggccctcctcccctacccacaactcccacttcttggccctggcattcccctgtacggtggaatataaaatttgctagaaaaggggcctctcttcccaatgatggccgactagtctatcttctgctacatatgtagctagagacacgagttctggggggtactgactagatcataatgttgttccacctatagggttgcagacagcttcagctccttgggtactttctctagatcctccatcagggaccctgtgttacatcctatagatgactgtgagcatccacttctgtatttgccaagtactggcatagcctcacaagagacagctatatcagggacctttcagcaaaaacttgctggcatatgcaatagtgtctgtgtttgctggctgattatgggatggactcctgggtgaggcagtctctggatggtccatcctttcattatttgctccaaactttgtctctacaactccttccgtgggtattttattccttattctagggaggaatgaagtattcatgcgttggtcttccttcttgattttcttgtgttttggaaaatgtatctggggtatcctaggtttctgagctaaaatccacttatcagtgagtgcataccacgtgacttcttttgtgattgggttacctcattcaggatgatatcctccagatacacccatttgcccaagagtttcataaattcattgtttttgatagctgagtagtactccattgtgtaaatgtaccacattttctgtatccattcttctgttgagggacatctgggttgtttccatcttttggctattataaataaggctggtatgaacatagtggagtatgtgtccttattaccagttggaacatcttctgggtatatgcccaggaaagatattcctggatctactggtagtactatgttcagttttctgaggagccaccagactgatttccagtatggttgtacaagcttgcaatcccaccttcaatggaggagtgttcctctttctccacatcctcagcagcatctgctgtcacttgaatttttgatcttagccattctgactggtgtgaggtggaatctcaggtttgttttgatttgcattttcctgatgattaaggatgttgaacattttttcaagtgcttctcagccctttggtttttcatagcttagaattttttgtttagctctgtaccccatttttaatggggttatttgaatttctggagtccagatttttgacctctttgtatatattggatattactcccctatcagatttaggattgttaaaaatcctttcccaaatctgttggtggcctttttgtcttattgacagtgtcttttgccttacagaagctttgcaatttcatgaggtcccatttttcaattcttgatctattttttttaaattaggtattttccttgtttacattttcaatgctatcccaaaagtccgccatacccacctcccccaaccccctacccacccactccccctttttggccctttggttcccctgtactggggcatatacagtttgcaagtccaatgggcctctctttgcagtgatggccgactaggccatcttttgatacatatgcagctagagtcaagagctctggggtactggttagttcatattgttgttccacctatagggttgcagttccctttagctccttgggtaatttctctagctcctccattgggggccctgtgacccatccattagctgactgtgatcatccacttctgtgtttgctaggccccggcatagtctcacaagaactgactggagtgaagtggaatctcagggttgttttgatttgcatttccctgattattaaggatgttgaacattttttcaggtgcttctcagccattcgttattcctcaggtgagaattctttgttcagctctgagccccattttttaatggggttatttgattttctggagtccaccttcttgagttctttatatatattggatattagtcccctatccgatttgggataggtaaatatcctttcccaatctgttggtggcctttttgtcttattgatggtgtcttttgccttgcagaagctttgcaattttatgaggtccaatttatcgattctcgatcttacagcacaagccattgctgttctattcaggaattttcctcctgtacccatatcttcgaggcttttccctactttctcctctataagtttcagtgtctctggtttcatgtggagctccttaatccacttagatttgaccttagtacaaggagataggaatggatcaattcacattcttctccatgataaccgcgttgtgccagcaccatttgtagaaaatgctgtcttttttccactggatggttttagctcccttgtcaatgatcaagtgaccataggtgtgtgggttcatctctgggtcttcaattctgttcaattggtctacttgtctgtaactataccaataccatgcagtttttatcacaattgctctgtagtacagctttaggtcaggcatggtgattccaccagaggttcttttatccttgagaagagtttttctatcctaactcaatttttcaacgaattagaaagggcaatcagcagattcatctggaataacaattcttgatcttaaagcacaggccattgctgttctgtttagatttttttcccctgtgcccatatcttcttggcttttctccaatttctcctctataaattttagtgtgtctggttttatgtggagttctttgatccacttagacttgagctttgtacaaggagataagaaagatcaatttgcattcttctacatgataaccaccagttgtaccagcaccatttgttgaaaatgctgtcttttacccactggatggttttagctcccttgtcaaaaataaagtaaccttaggtgtgtgggttcatttctgggttttcaattctattccattgatctacctgtttgatgctgtatcacaattgctttgtagtacagcttgaggtcgggcatggtgattcccccagaggttcttttattgttgagaatagtatttgctcttccaggttttttgttattccatttgaaattgcaaatttccctttctaactccatgaagaattgagttggaattttgatggggattgcattgtatctgaagatttcttttagcatgatagcccatttttactatattacccctgccagtccataagcatggaagatctttccatcttctgagactttcttcaatttctttcttcagagacttgaagttcttgtcatacagatctttcacttccttagttagagtcacagcaaggtattttatattgtttgtgactattgagaagggtgttgtttccctaacttctttctcatcctgtttatcctttgtgtagagaaaggccactgatttgtttgagttaattttatatccatctactgcactgaagctgtttatcaggattaggagttctctggtggaatcactttagggtcacttatatatactatcatatcatatgcaaatagtgatattttgacttcttcctttccaatttgtatccccttgatctccatttgttgtcgaattgctctggctaggacttcaagtacaatgttgaatgttagggagaaagtggacagccttgtctagtccctgattttagtggattgcttctagcttctcaccatttactttgatgctggctactgttttgctgtagattgcttttattatgtttatgtatgagacttgaattcctgatctttccataacttttatcatgaagagttgtttgattttgtcaaatgatttctcaacatctaacaagatgataatgtggtttttgtctttgagtttgtttatatagtggattatgttgatggatttccatatattaaaccatccctgcatccctgggatgaaacctacctgttcaggatggatgattgttttaatgtgttctgggattccatttgcgaggattttaatatttttgaatcgatattcctaagggaaattggtctgaagttctctttctttgttggatctttgtatggtttaggtatcagagtaattgtggcttcatagaatgaattgggtagagaatcttctgtttctattttgtggaatagtttgaggagtgttggaattaggtcttctttgaatgtctgacagaactctgcactaaacccatctggtcctgggattttatttttggttgggagactattaatgactgcttctatttccttaggaaaaatggaactgttaagatcgtgaatctgatcctgatttaacattggtacctgatatctgtctaggaaggagtccatttcatccaggttttccagttttgttgagtattgccttttgtagtaggatctgatgatgtttgagatttcctaaggatctgttgttatgtctcctcctcatttttgattttgttacgtaggatactgtccctgtgccctctagttagtctggctaagggtttatctatcttgttgattttcttaaagaaccaggtcctggtttggttgattctttgaatagttctttttgtttccacttggttgatttcaggcctaaatttgattatttcctgctgtctactcctcttgggtgaaattgattcctttttttctagagtttctgtgtgtgctgtcagactgctagagtatggtcttatagtctctctggtttctttttggaggcactcagggctatgaattatcctcttaggactgctttcattgtgttccataagtttgggtatgttttggcttcattttcattaatgtctaaaaagtctttaatttctttcttcattccttccttgaccaaggtatcattgagtagagtttttctcagtttccatgtgaatgttggctttctattatttatgctgttactgaagatcatccttagtccatggtgatctgataggatgcatgggataattttaatatgcttgtatatgttaaggcctgttttgtgactgattatatggtcagttttggaggaggtaccataaggtgctgagaagaaggtatatccttttgttttaggataaaatgttctgtaaatgtctgttaaatccatttgtttcataacttctgttaatgtccatgtgtctctgtttagtatctatttccaggatctgttcattggtgggatgggttgttgaagtctcccactattattatctgaggtgcaatgtgtgctttgagctttactaaagtttctttaatgaatggctgcccttgcagttggagcatagatatttagaatttagagtacatcttggtagattttacttttgatgtgtatgaagtgctcctccttgtcttttttgatatctttgggttggaagtcaattttattctttattagaatggctactccagcttgtttcttcagaccaaatacttggaaaattgtttttcagccatttactctgaggtagtgtctgtctatgtccctgaggtgggtttcctgtaagcagcaaaaagttgggtccagatggtgcagccagtctgttactctatgtctttttgttggggaattgagtccattgatattaagagatattaaggaaaagtaattgttgcttcctggtatttttgttttcagagttgggattctgttcttgctgctgtcttcttttaggttagtagaaggattactttcttgctttttctagggtgtagttaccatccttgtgttggtgttttcccatcattatcctttgaagggctgggtttgtctaaagatactgtgaatctggtttcgtcatggaatactttggtttatccatctatggtaattgagaattttgctgggtgtagtaccctggcctggcatttgtgttctcttaggatctgtataacatctatccagtctttcatagtctctggttagaagtctggagtaattctaataggcctgcctttatatgttacttgaccttgtttcccttactgcttttaatattctgtctttatttagttcatttgttctgattattatgtgtcaggaggaatttcttttctgctccagtctatttggagttctgtaggcttcttgtatgatcatgggcatctctttctttaggtatggggagttttcttctataattttgttgaaaatatttgctggccctttaagttgaaaatcttctttctcctctactcctattatcagcaagtttggtcttctcatggtatcctggatttcctgaatgttttgggttatgatctttttccattatgcattttctttgattgttatgtccatgttccctatgggatcttctgcacctgagattctctcttccatcccttgcattctgttgctgatgctcacatctatggttcctaatttctttcctagggtttctatttccagagttgttttcctttggcttttcttcattgtttctactttcatttttagatgttgggtggttttgttcaaatccatcccctgtttggttgttttttcctgtttttctttaagggatttttgtgaatcttctacctgtttagcagtgtttgcctgtagttcttttaagacttctacctgtttaataatgttctcctgtatttctttaatggagttattaatgtccttcttaaatcttctaccaccatcatgagacatgagatatgagtttaaatctgcatcttgcttttcgggtgtgttggggcatccaggacttgctgtggtgggtgtactaggttctgatgatgcccagtgttcttggtttctgttagtaagattcttacgtttgcctttcaccatctggaaatttctggtgttaatgttcaagctgtctctgggtggagcttgatcctcctgtgattttgttagcctctgtctgcactctccaactctcacctgagttccagtggtcagagtactctctgcaggcaagctctcctcttgcagggcaggtgtccagaagtgtggggctctgatccatatcctgagttctggggtcagagtcatccatgtaggctgactctcctctggcaaggaacgtgcccagggatctgggtctcagctcagccttctggctgaggatgaaggcccaatgggaccctgactaagatgctctgttgcttctattgcccaactgctctcagatgatcataaggtcctgggtatggtaggggtcctgcggtgtggatcatcctctggtgccctagatgcccttggcctggttcatggagaagatggccgggctgcccctgacctgaatgggtcccagcctctggtcgggtggggttcctctgtccctgttcctgctggcacaagaccccctgccattctctggagctgatgttgctttccactcacccatgatcccaaggtcatcccaaggtcctgcagtgtggagagcactctggtacccttagtggcctccgcagggctcAGAAGGAAGATGGCATGTATGTCCCCGACCAGAATGAGGATCATTGAGGCTTATT e rn5.chr14 99254910 1 - 115151701 I a score=32246.000000 s mm10.chr5_JH584296_random 118180 830 + 199368 CTTAAGTTACTACTTTTAATAT---GAACTGGTGGAACTTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTGGTTGggagggttatattggagagtttgaaaggaggaaaaggaagagagagat-gttgtaatcataatctcaaaaataaaaTTTTATAGTGTTTATTATAAGAACTTTGCC-----------------------------------------------------------------------------------------------AATAAAA------------------TCTCACATCAAAGTCAACCAGACTCAAAGTCTGTATATCTTTATAAACTTCTACACATTAAAAACAG-TATTCTGATCTGTGGAACTTCACAATTGATTCTATAATTTCAATAAGGAATATATTCTAGTGCACCTATCTACCACAAAGCCTGAAAATCCCATGACAT--TTGAATGAGAA-AACCATGTGATATATATCCTCTTTACAATGTACAACTCATGTCAGTCAGCAC--TTCTGTCCTCCCTGGTCCTCTAGTAtttagtccttttgtcttctttctgactctttctattgtaaccaaatgactactcatgtacatatatggacagatactgcataggagagagaacatgcatttttctttc----tgatattgggtgatctcacttggtgttaatcattttatgtctatgccttttctgcatattttataactttgttcttctttagatctgaatagtaatcaatgttacatatatatcagcctttcatttttattctgtctgttgatgaactactagttgtaatgtaattcagtgctctagtgaacacagcagcagcaaacattggggtgtgaagtacctctgtagtagggtatataatcctctttgcatatgcccagaagtgaaa s rn5.chr14 99254911 909 - 115151701 CTTAAGAAACTATTTTTAATATTAAGAATTGCTGGAATTATTTGTGTGTGGGGG--------------------------------------GGTTGTGAGGGTAATACTGTAAAGTTAAGAAGGAGTAAAAAAAAGGAAGAGAGAGATGTAATCATATTCCCAAAAATAAAATATTGTATCCTTTACTATAAGAAAAGTGCTggggttggggatttagctcagtggtagagcgcttgcctaggaagcgcaaggccctgggttcggtccccagctccaaaaaaaagaaccaaaaaaaaaAAAAAAAGAAAAGTGCTGATAAATCCAAATACCAAACTCAAGCAGTCTCAAAGACAAGACATCTTCATAAATTTCTACACATTAAGAACAGACATTCTGCTGTGTGCAGATTCATAACTGATTCTGTACTCTCAGTAGGGAATTTGACCTAGTGCACTTTTCTACCACCCAACCTGAAAATCCCATGACAGAATTGAATGAGAAGAATCACTGGATGAAGATTCTCTTT------CACAACTTATGTCAATCAATACCATTCTGTCTTTCCTGATCCCTTAGTATTTATTCCTTTTGTCCTCGTTTCTACTGATTAGACTGTATCTACATGACTAGTCATTTACATGTTTGGGGagattccacctatgaaagagaatctgcatttttctttctttatgacattggctgatctctcttagtgttggtccttccatttctctgcattttctgcatattttagaacttaattcttctttagagctgagtactattcaattttgtgttcatatcaaactt--aatttta--ccatatgatgatatataaatagttggagtgtaatttgatgctatagtgaagagagcagcaataaacattggggtgtagagtacctctttagtcaggtattgaatcctctgtgttcatgcccagaagtgaaa i rn5.chr14 I 1 I 9683 a score=0.000000 s mm10.chr5_JH584296_random 119010 2488 + 199368 aagcaaggtcagatactattgttagttttagttcattctgagacatctccagacactttcttacaattcttgtataatttgcagtacaggcaaccatgactagtgctccattcaatctgcatacttaccaacacttcctgtcagagttttttttttttttttttttttttttttttttggttttctaagacagggtttctctgtatagccctggctatcctggaactcactttgtagaccaggctggcctcgaacttagaaatccacctgGCAAAGGCTACAAAAAGGGACTTGTGTTTCTTTCATCAGTGACTGGGCACAAAACAAATCGACCTGTACGAAGTACCAGGACACCACAGAAAAGGGAAAACTTGGCTAAATTGTGAAACCAGCTTTACTTTCACAAGCCAATCTGACAACAGTGTTACAGGAGTGAATGCTCTCACAGTGAAATGTGCAGGTGGTTCTTATGTGTGAGGAGGGGATACATTTGTAACTAGAAAGGTAAAGTGGTTCTCAATTTCAGATTCAACACAAGTGAGTTGGGCTTATCAGCTAAGCTGGTGGAAAACACACTGAGCTCTTCCAGCCCTTCTTCCAAGGACCAGCTCCTCATCCCAGCTGGCATGCCTGCATGCTGAGTCCTAAGACCCCTTGAAGCCTTTTCAGAGTGTCCAAGGAGTCTCATCACCACAGTCATCATTCTCTAAGAGAATAATTCTGTGCTGAGTCACATGACTTGTAATTGCCTAATGAGAACACCAGAGGGACAGATTCAGAAAGGAACATGAGGAATTGATGACTTCAGTCTGTTCATCTGCTTCACAGTTGTCAGGTCTAATGATGTCCCCTCATACAGAAAGTTACTGGTCCTCGTATTGTTTACAATCTAGAAGACAAGTCACAAGAAAAAACAATGTTACCTTAGGAAAGTCTACATTTTATTAAAGACTATACTCAACAACTGAGTGCCTTATTCCCTCCTTCTTTTTGTAATAATTTACATCAAGAAAATAAATTATAAGCTGATGCTGAGTTTTGTGAATGAACAATCTCTGGTGGGATGTATATGATGCTGTTTCTAGTCGTGGGGgtatcttaatacctgctctcaagttggtggcattgtttgggaatactcagtcactatgatcctgctgggggatatttgccactagggatgggtttgaatttttaaaaAAATGGGGGTGTTTtggagagaccacacagtggttaagaggctgctctttcagactactgggatcatttcccatcacccacatgAAAACTTTGGGACATGCtgtcttaaccagttttctgctgtgtgacaaaacattctgaccaaaagcaacttgaggagtcaggatttctttcctcttacagccttcaggtcccagtccttaactgaggggcatcaggggaggaagtcaagcaggaacctggaggGGAATACTGGAGAAacctcctgcactggcagccattctttgttgtttaagagtcatcaaggctatactggtttagaaggcatgaagggtaaaggagagcatctgaagtttgtccctgtgagaagccaggagaggacattggtgaagttaaagcctcagtaacagttgaaggcacatgtttataggggtgatggagagaagatgaagcttcgaccctgagagagcctatgagatcctattgctaaaagtgcaatcttgacacagcagaagactccagtgtgttggagctgccagtatcatgtgatgaccccaagaacaacagcagcattgagtgtagcaagccagtaagcagcacctttcaaggcctctgtgtaggcttctgcctccaggttcctgccctgttttagttcccgatctgaagtcctctagtgttgcgtgccttccagcagctcacaaggacaggtacacctgaatgacaggcaggcgctgaaagagagggaaactaggtgacgagagagatgaaaccaagacagtgttctgatcaaggttcaaatttttaatggcagacacgctgtataaaggagagaggaagcccattcccaccaaatcatccttggagtccagctgcaggtgaccacctgtaggatcagatgtagactcctgtatatctaggccaactcccagtaggtagcagcggacaggggctgaacaatagagtgatctatggaggcaggatccaccctagataatctccttagtggcaacaaagttgaggaggtctgattcagtgaacttcaggttgggtgggagTGGGGGGGTGTTACACTCTAGTGACTCctctgactattgcctgcctttggccccttttctctaactggaaaaccttgtctagcctcaataaaaacagatgcacctTGGTAAGCTAATGTGCATTTGTGTGAggactcctcttctctgaggggaagtcaaataaacctccccaatttgttttggtcatgattttatcacagcaatagaaaccttaagtaagataATGATTTTGG e rn5.chr14 99255820 9683 - 115151701 I a score=13946.000000 s mm10.chr5_JH584296_random 121498 291 + 199368 TCTGTAAGCTCTGCTCAATTCCATAGAATGCAGTTATTAATGGATTGTGACTTTTCTGTCTCAAAAAATACATGTGATTTTGAAGAATGATCCTTACGGGCTGGGAGTGCAGGTAGTAGGATCCTTGAATCTCTGAAGCAATCCTGTGGCCAAGATCAACCTGGTTTCCAGTAGGGGGCAGCACTGACACAGAGTATAAATGGTGCCTCGGGTAGTTGTGTGTTCTCACCAAGGGCTAGGCTGAGAAG--CTTCCATACACCAACACCCTCTCCCCAGCTCTTGCAACCATGA s rn5.chr14 99265503 284 - 115151701 TCCATAAGAGCTTCTCAATTCTATAGAATGCAGCTATCAATGGACTATGATTCTTCTGCTTCAGAAAATCCATGTTATTTTGTACAATGATTCTTCCTGGCTGGGAGTGCAGATATTAGGAAACTCAAGGCTTTGAAGAAATCCTGTGACAGATGTCAATCACTTGTCCAGCAGAGGGCAGGACTGACACACAATAAAAATGGTGCTTGG----CTTGTGTGTTATCAACCAGGTCTAGGCTGAGAAGTCCCTCTCTATACCA-----CACCCCTAAACACTTGCAAGCATga i rn5.chr14 I 9683 I 7 a score=0.000000 s mm10.chr5_JH584296_random 121789 6515 + 199368 TTAATTTGTACTTGAAAatataactatatataaattatatggagtatatggaatatatatggaaatatatgatgtatggagatatagatatatagatagagatagagatatggaaatataACTAAATGGGCCTCTGAATGATTTTATTCTATTTGTTTTCTTCTTTTGGTTCTTCTGCTTTCCTGGTAGCAGAGTTTTGTCCTTCAGGAAAtcattgataagaaatgccagtcccttagaatacccaaaatacaatttgcaaaacacatgaaactcaagaagaaggaagaccaaagtgtggatactttgttccttcttagaatggggaacaaaatactcatggaggaagttacagagacaaagttcggagcagagcctgaaggaatgaccaaccagagactgtcccacttggggatctaccccataaacaaccaccaaacccagacactgggcagatgccaacaagagtctgctgacaggaatctgatatagctgtctcctgcgaggctctgccagtgcctggcaaatacagaagtgaatgctcatagttgtccattggatggagcacaaggtccccaatggatgtgccagagaaatacccagggagctgaaggagactgaagcctcatagaaggaacatcaatatgaactaatcagtacactcagagctccttggagctataccaccaaccaaagaaaacacatggtggaagttgaggctttagctatatttgtagcagaggatggcctagttggtcatcaatgggaggagagtcccttggtcctgctaagactctctgcctcaatataggggattgccaggacaagcaatgggagtgggtgggctcgtgaacatggggaggggtaggagataggggatttttggaggggaaactaggaaagggggtaacatttgaaatataaataaagaaaatatctaataaaTATAATATCaaaaaaggaaacgaagaggaaagaaaggaaaagaaaGAAATGCCAGTCACTCTCCCTCACTCTTGCTCAGTGATCCCGAGTTTCGAGTAACAGGAGCTTCCTTTTTAGGCTATATCTCATGGTGGCCCTTGCATatgaaatactatttacttcaagagaaaagaaaaggggcacagtcacaatcagattagaggaaaacaaaacagtagtagtgtaaatagttttatatccTCCACTCCTAATTGCTACTGGTTGAAGAATATCATTAATGGTGTCAGGGCTCTCAAACTTATAGTAAAAGTTgactaattactgcacagaacaaccatagctcatgcattaagatcaacaataaatgggcttcatgaaactgaatatcctctgtaaggcaaaagacagcatcaataggacaaaatggcagcataaagaatggaaaatgaatttttgatcttagccattctgactggtgtgaggtggaatctcagggttgttttgatttgcatttccctgatgattaaggatgttgaacattttttcaggtgcttctctgccattcggtattcctcaggtgagaattctttgttcagctctgagccccattttttaatggggttatttgtttttctggagcccaccttcttgaattctttatatatatatattggatattagtcctctatctgatttaggataggtaaagatcctttgccaatctgttgatggtctttttgtcttgttgatggtgtcttttgccttgcagaagctttgcaactttatgaggtcccatttattgattctcgatcttaacggcacaagctgttgctgttttttccggaacatttcccctgtacccatatctttgaggcttttctctactttctcctctataagtttcagtgtctctggttttatgtggagttccttaatccacttagatttgaccttagtataaggagataggaatggatcaattcacattcttctccatgataaccgccagttgtgccagcaccatttgttgaaaatgctgtcttttttccactggatgcttttagctcccttgtcaaagatcaagtgaccataggtgtgtgggatcaggtgacagcagatgctggcgaggatatggataaagaggaacactcctccaaggttggtgggatttcaagcttgaacaaccactctggaaatcagtctggcagtttctcagaaaactggatatagtactaccggaggatcctgcaatacctctcttgggcatatatccagaagatgttccaaccggtaagaaggacacatgctccactatgttcatagcagccttatttattatagccagaagctggaaagaacccagatgtcccttaacagaggaatggatacagaaaatgtggcacatttacacaatggagtactactccgctattaaaaagaatgaatttatgaaattcctaggcaaatggatgtacctggagggcatcatattgaatgaggtaacccaataacaaaggaactcacacaatatgtactcactgataagaggatattagcccagaaacttaggatacccaagatataagatacaatttgctagacgcatgaaactcaagaagaacgaagactaaagtgtggacactttgctccttcttagaattgggaacaatacacccatggaaggagttacagagacaaagtttggagctgtgaggaaaggatggaccatctagagcctgcatatccacggttccatcccataatcagcttccaaacgctgacaccattgcatatactagcaagatcttgctgaaaggacccagatatagctgtctcttgtcagactatgccggggcctagcaaacacatgagtggatggtcacagtcagctattggatggatcacagggcccccaatggaggagctagagaaagtacacaaggagctaaaatgatctgcaaccctataggtagaacaacattatgaactaaccagtaccccggagctcttgactctagctgcatatgtatcaaaggatggcctagtcagccatcactggaaagagaggcccattggacttgcaaactttatatgccccagtacaagggaacaccagggccaaaaagtgggagtgggtggataggggagtgaggggtgggtagggtatggtggacttttgggatagcattggaaatgtaaatgaggaaaatacttaacaaaaatatacaaataaaTAAATAAATGAATAAAATTTATAACGCAAAAAAAagaaactttgcagtttcatgaggtcacatttgccaattctcaatcttacagcacaagccattgctgttctattcagtaatttttcccctgtgcccatatctttgaggcttttccccactttctcctctataagtttcagtgtctctggttttatgtggagctccttgatccacttagatttgaccttagtacagggagatagaaatggatcaattcacattcttctacatgataaccaccagttgtgccagcaccatttgttgaaaattctgtcttttttccactagatgcttttagctcccttgtagaagatcaagtgaccatagatgtgtacgttcatttctgggtcttcaattctattctattggtctacatgtctgtcACAActctgacactcttcatgatactttgctatgcttaaggacagaagccagcaGCAGGGTCATATGAttagtttacagttcatagcataccctcagtcacttccactcctctcaatcactccctattctcttccacaccttgcctcccattctcctcagaaaaggggaaacctcccatggataaatattagcttatcaatgtgcatctttttcaattaaggctagacaatggtgcccaaataagggaaagtgatcaaaagttaggcaacagtcagtaatcaccccttgtcctgtcgtttctgttccatatgaaagccaagcttcagaactgttaaatatgtgtaaggggcctaggtctgtctcatgaaagttctctggtcggtagttcaatctcaatgatcccaactgtggctaggtagcttgattctgtaggtttttcttgtgctgtctttgatctctctggctccttcaatcctccccaccgcctacaaaattccctgaacttcgtttgcctggggtctctgcatgtgattctatttatggccatgtgattcctctccaaggacagttgtgctaggctcctgtctgcagaatatcattagtaatgtcagggCTcttgaacagattggaaaaggtgatgacttcttgaaatgaacacccatggctcaggcactcagttcaacagttaattaaagggaccccattaaatggaatatcctctggaagacaagggacagaattagtatgtcaaaacagaagcctatagaatgaaaaaacaaacaaacaaacaaacatctttaccatctattcatttgtcagagggctgatatccaaacaaaatatatatctcaaggaaccagacatctacaaaccaaataccccatttaaaaatagggtacagaggtcaacagagaattttcaacagaggaatctctaatggtcaagaagcaattcacgacatattctactttcctagtcaaatgcatattgaaagtactttgagggtccatcctataaccatcagcatggtaaaaaaatgggaatgggtgggtaagaaagtcggggggagggtatgggggacttttgggatagcattctaaatgtaattgaggaaatatgttataataaaaaatatatatataaaaaaagatttccactttaaaaaaaaagactaaaaactcaagatgcagtacatgctggtgaggatgtggagtaagggagacagtcttcaaattctggtgagtgtgtcaacttttatactacatttgtaaatcaatcttgatatttctcacaaataattctacctcaaaacccagttatatcactcctgggcaaatactcaaaacatgtttccccataatacaaggatacttgctcaactacattcatagcacctttattcataataggcagaaagtggaaacaacccacctgtccctctaccatagaatggataaggaatattttgtacatttatgccatggaatcgtggtcatctactaaaaatatggaatattatgtgattttcaggcagatggatgaaactggaaaagatcattctgagtgaggtaactcagacccagaaggaattgcgtgttatgtagtcactgttaatgcattattacttatagagtataagatgaccatgctacaatccaaatccgcgaacaagctaagtaacaattgggaacaaggtagagtgattgaatctcactcagaagaggaaataaaatcggtatcagtggtgatttcttagggagaactatataggagagggtacagggacaggaacattttggggtatcaggtatggtgggaagggccaagggatttagagatttgggagatagaaaagcaatccatgtgggggcatttcagggaaaagcaagagaccttggatggagcaggctgctgggagtatatgggagggaccttggctgagagcccagcagatgggtataaagagatgaagtagccacctcctctagctaggcaagatttccaatggagggagggggacaccaatccaccaattcctatccaaaaatttccctgcctacaagatatgcaggtataaagatagagcagagattgaaggaataaacaaccaatgattaaccaaacttgagatctaccccatggaagagagccaaactctgacactcttaatgatacttggttatacttaaggacagaagccttgcataactgtcttgggagtggcttcatccagcacctgatggcagcagatggatacccacagccaaacattagacagaatttggggagtcttgtggaaaagtcagaggaaggatagagggagccagatggtgaaaagatcagcccagggctttttaccaaatttgaccaaacagcagagcttaaggacccagccattcctggaagacagaggaggtcatgaagcatgtaggcaccctcccttcctggattacatttctcaggaatacccatgggcacagcgtccatttgccacctacagacaagagaagtccttgccacctcattccctaaagaccaatcagtttaaaattcatactgtgcctagttgctgtataaaaactggccaaatgggccatgtgggtttggggcctcttcttgaggtgcatgacgatcctagcatactggaacaataaatttctcttgactttgaaatcatcaccttctacgagttcttcactcgagggtccccattagctaagggtcatcagagctttacaacagagtcaagcattccagaaggagacctacataactaagtcatgtggacccattgggagttcacacagactgaactaccgatcaaagagcatgcatggtctagacctaggcctcctactcatatggaacagatgtgaaatttggtcttaaatgagggtctcctaaaaatcagactgggtg e rn5.chr14 99265787 7 - 115151701 I a score=94770.000000 s mm10.chr5_JH584296_random 128304 2007 + 199368 ttttctccttttaaactttgttctctgcatttggaaccttttccccttgatgggctgacttgtctggcttcagtgggtgaggatgcatttagtcctgatgcaacttggtgtgtcaaagtggtgtggaacctggtaggggtggggagtgtgtgcctctcctttgctgaggagaatggcagaaggaaataagatgaaaaggtcagagggtagaactgggaggaaaagacaggcaggaagtgatcaggtggtaaagtgaatacataaatgaaTTAATGAAAGCAAAAAGAAATGAGAAACAGGGAGCTAGACATGTT-AGCATTTAAACTTTGCCCACAACAAACTGAACAGAAACAAGTTTTTCCTGAAACATGTTAGCAACATATATTCTCATGAGCCACTTATAATTACACTAAATAGTCATGAAATATGCAATTATTTTGATATAAGACAAAGTTCTGAACATTGGATTGAAGCTTGGTGCCTTTAGTTAGTATGTACTTATAACTGATAATTAGTATATGTCAATTACACAAAGAATGTTGTTTCAGTCAGACATTTCCCTA-AGACATAAATAGGTAAGGTTATATTTA------GTTCTTATTTCCCTCCCTCTGTACATTGTTTCTTTCTCTTCTCTGATCAAGATATGCGTAAAGACTATACTATAGAAATTGTTCAGGattttttattattttgatttttatttacttattttGAACAG-TTTTGTTCCTTTCCTGATCAGGGATAAGATGAGTTCAAGAGACATCAAAAGGAAAGTGCTCAGGGACTCTGGCTCCCTATCAAGAGGAAGTTTTTTGAATTTTTATATTAGGTATT-AGATAAGTAGATAGAATGCTACTGAATTCCTGCTCTGAATTCTCAACCTAGAGGGTGCTGAGATAATTGTTA-CATATTATCACACCCTGTT-AATTTGGTTCATAGATCCTGTGAATGGCTAGGTAAACATTCTATGAAATGAAGCTCATCCTGACCATTCTTAGAATGACTCAGGATATTGCTATATCATTGGCTGATCTACATAGTGACTATCTAAAAAAAGGAAACAATCAAGCATACCAGCAACACACACATGTACACAAAATGTTTGAATTGTAATGAATTAAAGATAATGCCAAAGTCGTAAGCTTTTGTGCAAAATAAA--------------------TTCCTGATTCCTTTTGATTCTCTATCCATGAGTATGTTTACCATTCTCAAACATGGGCCTTTAAggatcaaa-------aattatgaatcctggttgctctttcagacaactggagttcagttctagacaagcacctggtagctgacaaccatctatacaacgttctgatgcctttttctATCATGCAAGGATACATGCAAATAAAAGAGGAATATACATAAAATACATACAGAAATAAATATTGCAGAGTGACAAACTACTAATTTCTTCTCACTCACCCATAGTGAAAGAGTTCAAACTCTGGAGCTCAGAGCATCTTACAATATTGCTCACCAATGGAGCTCAAAGGATATGCCTAAAACTCCACATGCTCCCTTCACAGACACACAAGTGCTACTGAACAACATCACCATTTTAATTAATTGGGCCATTTTTTATTCCCTTGTGAAATTGAGTCCTTTTTTATTTAAAGAGTTCTTCAGCTGGTTGAATAGCTACCTGTGTATtatgtggatttgtgcatgtgaaaggtgggatccacagaggacagaaaggagggtcctagcacctgaagcctgagttccatttgacagccacgtggttattagctctgaaacagaactttggttctctgcaaaagcagcatgtgctcttcactggtgaagagtctctctcaatctacatgttgtttgttttaagaatatgaaagcatgttaattgtgggaaaatatcaggtgagttcactggtcttaaggaacaagttcagggaattggacattcagacagggagaaagggtgtgagggaagacagaaagaacgagTCTGAGAGAGGTATGTTCTTTATTTTTTTTTCT s rn5.chr14 99265794 2010 - 115151701 ttgtctcttattgaactttgttgcatttctttggaaacttttcccctagctggtctgccttgtttggcttcagtgggagaggatgcatttagtcctcatgcaactttgtgtgacagagcagtatgatacctagtctgggtgtggcctgggtgcctgtccttctctgggaataatgggagcaggaaatgaggggaaatcgtcaaagggtaagactgggagtaaagcaaaggaaagaggtgatcgggtggtaaagtgaata----aatgaattaaTGAAAATAAAATAAAATGATGAATAGGAAGCTCGCTATGTTTAACATTTAATCTTTGTCCACTG-AACCTCAATAATAAGAAGTTCTCCCTGAAACAAGTTATCAACTTATATTTTCAGGGAACACTTTTAATAACATTAAAAAGTAACGAACCATCCAATTGTTTTACTCTAAGA-AAACTTGTGAGGATTGTTGTTAAGCTTGGTGGGTATGGTTAGTATGCACTTAGAAAAGATCATTTGTATATGTATAATGTACAAAGAATGTAGTTTCTCTCAGACATGACCCTACAGACATAACTAGGGAAAGTTATATTTATTTTAGATTCTTATCTCCTGTCCTCT-TACATT--TTTATTCTCCTCTCTTATCAATATATGCTTAAAGATTATAGTATAAAAATCCTTCA--AATTTTTATTATTTTGACTTTTATTTACTTATGTTGCACAGCTTTTGTTCTATTTCAGAGCAGGGATAAGACAAAGTCATGAGAGATGAGAAGGAAAGTGCAGAGGGACTCTAGCTGCGTGTCAGGAAGAAGTTTCTTGAATGTT-ATATTAGGTATTGAAATAAGTAGATAGAGTGATATTGAATTTCTGCTCTGAAGGCTCAACATGTAGTGTGCTGAGATAGCTGTTAATGTATTATTACACCCTTTTTAATGCGGTTCACAAATCCAATGAATGGATAGACAAACACTGTATGAAGTAAAGCACATCCAGACATTTCATGGAATGACTCAGGACATTGGTATTGCTTTAGCAGATCTACTTAGTGGTTATCTTAAAAAATAAACCAATTT-GAAAGTCATCACCATACTCATGTGCACAAAACATCTGAAAGGTAACAAATTAAAGA--ATGCTGAACTGGTAAGCTTTTATGCAaaaacaaaacaaaacaaaacaaaaAACCACCAGCTTTCTTGTGATTATGTATCCTCAAGTACTATTTCTAGTGTCAAATATgggcattgagggatcatggctcagtaattaagattcctcattgacctatcagacaacctgagttcaattctggataaccatctggcagctca-aaccatct---tcgggttctgatgccttttttggtcatgaaag----cattcaaatagaacacaaatatacatagaattaatGCAGAAATCAATGATGTATATTGACAAAATCCTAATTTCCCCTCACTCACTCTTGGTGCAGGAGCTCAAACACTGGATACCAGAGCAAAGCAGCCTATTGCTCACCAATTGAGGTCAACGGACACACCTGAAACTCCACATGCTCTCTTCACAGA---------GCTCTACATCAACATCCCCATTTTAATTAAGTAGGCCATTTTTTATTTCTTTGTGGAATTGACTTA-TTTTCATTTAAAGA---CTTCAGATAGGCATATATTTACTGATGTATTATTAAGTTTtgtgcatgtgaaaattggtaaccacaaggaccaaaaaagagggttttatcacctgaagcctgagtttcatttgagagctacctgattataacaacagaaatcaatctttggtcctctgcaacactagcatgtgctcttaacctgtgaacaatctctcTCAAACTATAGGTCATTTGTTTTAAGAATAtgaaagcatgtttagtctaggtaaatcttaggtgagttcactggtcccaaggaataaggccagtgaactggatatgcagacagaaggacaggttgtaggttaagagtgaaagaaggagcCTGAGAGAAATTTCTTGTTCTATTTTGTTTTT i rn5.chr14 I 7 T 63325 a score=14605.000000 s mm10.chr5_JH584296_random 130311 348 + 199368 TCCTCTGTACTTTAGGCCAGCCTAGAAGTTCATATATTTCCCACCATAACTGATAACTTTATCCACCTTCCCAAGATTGTGAATTTTGACATGCCTGGCTTCAATGTGTACTTTTTTACTTCTTTCCAGAGGGTGATTGTTGTAGTCTT-TTAATTTAGATGCTTTATTCAATTCAGACAATAACAATGATGTTTAAACAAAGAAATCATGTTCTAAGTTTTCAATAAATACAGAGT--AACAAATTATTTTATTGATAGTT-----TACAGAAAGGGGGTATAATGACTAGGCTGAGTGAGATTTTTTTCTCTGTTCTTTTTATTACAACTGAAGATGGAAAATACATTTTTTTT s rn5.chr14 99204479 348 - 115151701 TCTTCTGTATCTCAGGCTAGCACAGGTTTCCACAAGTTTTCCATGTTACCTGATAACTTTATCCACCTACTGAAGATTGTAAATTGTGATATTCCTGGCATGAATGTATTTATTTTGACTTCCCTTGAGAGGACAGTTGTTGGTGAGTCATTAATTTAGTTCCATTATTCAATTCATACAATCACAATGATATTTAAACAGAGAACCTGTGATCTATGGGCGTAATAAATACAGTGTACAATAAATCATTTTATTGATGTTTCACTATACAGCAAGTAGTAATAATGACTAGGCTGAGGGAGATTTT--------TTATTTTTGTTACAAATCAATACTTAGAATAAAATTCCTTT i rn5.chr14 T 63325 I 67288 a score=0.000000 s mm10.chr5_JH584296_random 130659 1 + 199368 T e rn5.chr14 99204827 67288 - 115151701 I a score=12823.000000 s mm10.chr5_JH584296_random 130660 233 + 199368 GGTAAGACATGTGTCCCAAACCTTATTTTTATTCCAATCCAGAATG-----TTCCCATTTTACTGCCAGCAACGACAAAGGTTGGCCACCTGGTCAAAGACCCAGCGCTCCCCACATGTGTGGCAGATATCTGTAGCAAAGGAGGTGTTCTTGGGCTGCCTTATTGCCCTCAGTGTATCCATGAGATCCTGACAAAGTCGCACAAATCTTTCTACAGAGACTTGAGCAAATTCATCAT s rn5.chr14 99272115 238 - 115151701 GATGAGAGATGTGTCTCAAGTCTGTTGTTTATTCAAATATGGGAGTCCTATTTCCCAATTTACTGCCAGCAACAACAAAGTCTGGACCCATTGTGATAGACATAGTGCTCACCACATCTTTGGCAGGCATCTGTAGCAAAGGAGATGCTCTTGGGCTGCCTTATTGCCCTGAGTGTATCCACGATCTCAGGACAAAGTAGGGCAAATCTTTCTACAGATACTTGAGCCGAGTCATCAT i rn5.chr14 I 67288 C 0 a score=39974.000000 s mm10.chr5_JH584296_random 130893 434 + 199368 AGCACTCCAGAGGGGCAGGGTATTGTTCCACATTCATCTTGCTCCAGTTGGCTGTGTGCTGCAAAAGGTCCTTCAGGAAGGGCATGGAGAATTCATTGTTGTAGAAGTTGATATTGGAGATCTGAGAGCATTGTTTGAATGCAGGTAGGAGGACACTGAGCTGGGAGTCCTTCATCCTACACCCCTGCAAATCCAGAGTCTCAAGAGTGCCTGCCACTTTCATGAGGAGACCTCTCAGAGGCATAAGATCCAAATCCAGTAAGACCACACCTCTCAATTCCAGATGTTTTAGCTGAAAGAGGCTCTGACAGCAGGCAAAG-GAATCCAAATCTCTCTGTGAAATCAGGGAGTAAGTAATGGAGAAGGTCTTCAAGGGTGTCATCAAGCACCTAGAGGTAAAGGAGACAGATGGTTAGTTATGGCAAATGGGCTTG s rn5.chr14 99272353 429 - 115151701 AGCACTCCAGAGGGGCAGGGTATAGTTCCACATTGATCCTGCTCCAGTTGATTGTGTGCTGCAAAAGGTCCTTCAGAATATGCATGGAGAAGTTATTGCTGTAGAAGTTGACCATGGTGAGCTGACAGCAATGTCTGAGGGCAGGTAGGAGGGCATAGAGTTGGGAGTCATTCATTCTACACCACTTCAAATCCAGAGTCTCAAGAGTGTCTGCCACTTTCTCTAGGAGACCTCTCAGAGGCATAATATCCAGATCACATAAGACCACTCCACTCAAATCCAGATGTTTTAGCTGAAATAGGCTTTGACTGCGGGATAGG-GAATCCAAGTCTTTCTGTGAAATTAGGTAGTATGTGATTGAAAGGGTCTCCAAGGGAGTCATCAGGGACCTA---GTTAAG--AACAGGGTGTTAGTTATGGCTAATAGTGTTG i rn5.chr14 C 0 C 0 s eriEur1.scaffold_215500 1746 428 + 27225 AACTCTCCAGAGGGGCTGGATAGAGCTCTAGTTTTAACCTGCTGAGGCCCGAGGTACAGCTCAGCAGCTTCTCCAGGGTGGCCATGGACAGGCAGTTCCCATGCAGGCTGAAGGATCTGAGCTGGGAACAGCTGCTCAGGGCAGGGAGCAGGACCTCAAGCTGGGGGTCCTGGAGGCCACACAGACCCAGGTCCAGATGCTGGAGGGTGGATGCATTTACCTCCAGCAGAGATCGCAGGCACTTACTGACAGAGGT---TAAGGGGACTCCCTTCAGACACAGGTCCTTCAATTGACTGATACATGGGCTTTGGAACACGTgagtcaatattttttttctaaatc-tgcaGTTAGTGAGTGAGAAGACCTCCAAGGAGGTATTAAAACacctg---ggaagagagaaagaaagtttaGGATGGACCATGGGTTTG i eriEur1.scaffold_215500 N 0 I 1343 a score=50216.000000 s mm10.chr5_JH584296_random 131327 1132 + 199368 TAGATGTTTGGCAGGGATATACAGAGTGGTAGCAGGAATCAGGTGCCCCAAGATCAGTTTTACTAAGTGATTAAGGACATCATCTATGATGCTTTCTGTTGGAAACTGCTCAGTCATTTCAACCTCTTAATTTATCTCCTGGCCTCACTCTAAACCTGAAAACCAGTTCATCCCCTAATCCCAGAAAGCA-ACAGAAGAAATCCCATCCCAATAGAATTCTGACAGGATCTCAATATTTGCTTTGTGTTCACTGAATCTGCATTCTATCATTCCCTCTGCAGTCATGCTTGCTCTCATTTACAGCCCAAGCTCTACCTCCTGCCCCATGTATTCAGCACTAC-TGGGCTCAAAACATTTAACCCATGGGAAGTGGGTGATGATAGAAGGCTGTTCTAACAGATCTGAACATATAGCTCCTGTTTACCCTGTACTTGTGAGTCCCCTGACTTCTCACTACACACTTCCATTCCTCTTCAGTTTCCATTTGATTGGGCGGCCATGATTCTAGGAAGAAATACAACTGATCCTTACTAGATCTGACCTACTCTTTACCTCAAATCACTTTCCTACTTCATGAGTGTTCATTTGAGATACTGATTTATCTTGTAAAATTTCCCTTGTATAACTGAGTATTCATGGAAACAAGACAT--AACTTCCAGTCTTTGGAGTCTCTAAATATTTGTTCCTAGTGACTGGTTGGCATCATGTCCCCATAACCCTTAAGAAAAGAGAGACAGATTTGCTCTGATAGCTGAACCAGCTCTCCATCATGGCTTACCCTAGGACCTGATTCATCTGGGATCTGAGAAAATGGACACAGAACATGAAAAGATGCTGCAGACAGTTGAATTTGGAGAACTGAGAAACAAACTTGTTGATACACTTGACTTCGGTGACTCTTGTTCTATTGGGTAAATGGAAGTCGATTTTGTGGAGGGGTGCCAGGAATACTTTGCAAAGATTTCTCATCTGCCCAAAATAGGGGGCAAAATGTGTCAACTCTAAAAGAGTCCATTCAGTGTTTAGTTCTAACTCCATGATGTGCTCTGGATCAAAAATGTGGAAGATATGTCTGAGAGCTTTTACTGGCAGAGTCCAGATTTTCATCTTTGTACAGCAGAAATATAGGGAG s rn5.chr14 99272782 1079 - 115151701 TAGAGATTTGGCTGGAATGTACAGAGTGATAGAAGGATCCAGGTGCCTTATGGTCAGTTTGACTAAATGTTCAAGGACATCAGTTTTGATGCTTCCTGATGTAAATTACTCAGTCAGGCCCAGCCCACAGTTCATCCACTGACTTCACTCTCACACTGAAAAGCAATTTACCTCATAAGTCCAGAAAGCACACAGAAGTACTTCCATCAACATAAAGTCCTGACAGCATCTCGATATTTACTATGTGCTCAATGAATATGGATTCTATCCTTCCTTCTGAAGTCACCTGTGCTCTCAATTACAGCACAAGCTGTACCCCCTGTCCCATTCATCCAGTGCTACTTGTGTTCCAAAGTTTTCACCCATGGAAATTGGGGGAC-----AAGACTGTTTTCTTAGATTTGAGCATATAGCTCAGGTTCAAACTATGCTACCTAGTCCTCCAAATCCAGAAT-------------------------------------------ATAATACCTGGAAAAATTACAATCCACTCCTACTACCT--------CTCTTAATGCCAAATCAATTCTCTAATTCATAAAGGCTTATTAGAAACACTGATTTCACTCATAAAAGTTACCTTTTGTAGGTCAATATACATGAAAACAGGACATAAAATTCTGAGTCTTATGAGTCTGTGAATGTTTGTTCCTAGTGACT-GTTGGCGTTATGCGCCATTAATCCTTAAGATAAGAGAGACAGATTTGTTTTGCTATCTGAGCTAGCTTTACCTTCTTACTTACCCTAGGACTTGATTCATGTGATCTCTAAGAAAATGGACGCAGAACATGCAGAGATGCTGGAGGCAATTGAATTTGGAGAACTGAGATATAAACTTCTTGATACACTTGGTTTCTCTGTCTCTTGTTTCAGTGCTATTAGAGAGGGTCATCTTGTGGAGGGGTGCCAGGAAGACTTTCTGAAGATTTATCATCTTTCCAAAGTAGGCAGCAAAATGTGCCAGGTCAGACAGATTCCACTCTGTATTCAGTTCTAATTCAGTGATGTGTTGTGGATTAAATACATTCAAGATCTCTTTGAGAACTCTGAGTGGCAGCTCCCAGATTGTCATCTGTGTACAACAGAAATGTAGGGAG i rn5.chr14 C 0 C 0 e eriEur1.scaffold_215500 2174 1343 + 27225 I a score=18850.000000 s mm10.chr5_JH584296_random 132459 263 + 199368 CCCTTTCTCTCCTGGGCCCACTTCAAGAACCATG---------------TTTGTGCTTCATCAAGGCAGGACCTGATGCACAGGTCAAC------TGTGACCTTCAGACGCT--------GCCTCAGTGCATATCTGGGACGGACCTGCAGGGCTTTCTTTTCATCCAAGATCTCTGCTGAATAGTCACTGTCCTCTGAATCAGTCCATATGTTCCAGAAGCTATGGTGCACATTCCTCAGGTCGAGATACTGTAGTTTTTTCCTCCTGCAGGTGAAACATAAGAATGATGA s rn5.chr14 99273861 266 - 115151701 CCCTTTCTCTGCTGGGCCCACTTCAAGAAATATG---------------CTTGTGTTTCATCAAGGCAGGACCAGATGCACAATTCAAC------TATGACCTTCACTCGCT-----GCCGCCTCAGTGCATATCTGGGCAAGACCTTCACTACTTGCTTTTCCTCCCAGTTTTCTGCTGAACAGCTGCTCTCCTCTGCACCAGCCCATATGTTCCAGAAGGCATGGTGTGCATTTCTCAAATCAAGAACCTGTAGTTTTGTTCTCCTGTTGGTGAAACATATGAATGTCAT i rn5.chr14 C 0 C 0 s eriEur1.scaffold_215500 3517 260 + 27225 ccctttctttttttggtccaGTTCAGCAAGTAGGTGGAAAACCTATCAACTTGTTCTTCACCAAGGTAGAGGTCTACACACACCTCCAAGTAGGGTgtggccttctctttctttgaagTTCCCTCAG-----------------ACATCAGTTCTCTCTTTT---------------GTGAGTATGCTTGGAGGTGGGATCCAGTCCATGTGTTCCAGAACTTTTGCCCAGTGAACTGTAAATCCAGCACTTGTAATCTGCACCTGCTTTGGGCAAAATAGGACACTGATGA i eriEur1.scaffold_215500 I 1343 I 579 a score=16231.000000 s mm10.chr5_JH584296_random 132722 335 + 199368 CAGACCCTGAATTAGCTTTTACTACATATATCTAAACTCGTCTCTCTTCTGTGCTAAAGTGTACATTTTTTTTTCAGGACCTGATATCCAAGTTGGACTCAGGCTTGCTACTGAAGCTTTCCTGTG-CTTCTGTACACATGAATACTTTTCTTTCAATAAGGTACACTTTACTTCTCCTTACTTATATTATTAGTTCTTGTGGGAATGTCAGGGATAGGCTCATTCCACTGTGAGGCCACATTTACTCTAGTCCATATTCAAGGTTAATCCATATCGAACTGTGCTCAGTACAAGTAAACAGTAGCTGTCAAGAACCCTGTATCCCTGCCTGATGA s rn5.chr14 99274127 327 - 115151701 TAGACTCCGAATCAACTTTTATGAC--ATATCTAAACTCATCTCTCCCCCTTGCTAAAACACA---TGCTGTTTAAGCAGCTGACCTCCAAACTGGACTCAGGTATACTCCAGATGTTTTCCCATGCCTTCTCTTCACTTGATTACTTTTCTTTCACTAAGTCAAACCTTATCTCTCCTTAGTTATATCATTAGTGGTTGTAGAAATGTCAGGGATAGGCTCATTCTACTGTGAGGCTGCACTTACCCTAGTCCATATTCAACTATAACCCATATTCAACTGTCCTTATTAAAAATAAA---TAACTTTCAAGAACCATATATCCCT-CATGAAGA i rn5.chr14 C 0 C 0 e eriEur1.scaffold_215500 3777 579 + 27225 I a score=27444.000000 s mm10.chr5_JH584296_random 133057 407 + 199368 TGCCATCAGAAGCATCTGATCCATTTATGACAGATCTAATCTCCCTGACAATGTCTAATGTGTACTCCTTCTGCTCCCTTCTACAGGACTTGGAAATTGCTTACCTGGGGTGAAACCCTATGGTTCGAC-GAATGTCTACTCCATCTAGCACAGCCTGCAA-----TGTTTCCAGGTCAGTAGTCCT-CATCAATGCCCCCACAGGGAGACAGTGGAAAGGCCAGGCTATCACCAATGCCTTTATGAGCTTGATATACCTGCCATCAATGGCCTCCTTGAA-ATGTGCT---------------GGGAAGAGTCCATGGGCCATCTCCTCCAGATCAGACATGCCTAGAGCCTCCTCTCTCACCAGAGTCTGAATTGCCAGCTTCTGGAGTGTGGGTGGGGTATGAACATTCATCTTCTTAAGGTCTCCA s rn5.chr14 99274454 406 - 115151701 TGTTTTCAGAAACTTCTGATCAACTTATAGCCTAGCCTACTGCCCTAATAATCTCTATTGTGTAGTCCATGAAATCCCTTCTATGGTAATTGTTTATTTCCTACCTGGGGTGAAACTTTCTTGTCAGTC-GCATGTCTACTCCATCTAGCACAGCTTGAAA-----GGTTTCTAGGCTTGGTGTCTT-CATCAATGCACCCACAGGGAGACAGGGCAATGGCCAAGTTGCCACCATTTCTTTCACAAGCTTGGTTTGTCTGCCCTCAAAGGCCTCCTTGAA-CAGTGCT---------------GGGAAGAGCACATTTGGCATCTCCTCCAGAGAGAATATGGCCACATCCTCATTTCTGAGCAATGACTGTCTTGCCAGCATCTGGAGTGTGAGTGGGGTCGGAATACTCATCTTC-TAAGGTCTCCA i rn5.chr14 C 0 C 0 s eriEur1.scaffold_215500 4356 402 + 27225 TGGCATTAGAAGCCTTGGTCCCA---ATGGTCC-TCTACTCTCCCTGAC-CCAGCTATATTATAGGAAATATAGACCCTCTCAGACTA--TGGATCCTCCTTACCTGGGG-GAAACTTTCTGCTTGATCAGGACATCAATTCCATCCATCACAGCTTTGAAACTTGGATTCTCAGGAGCCCTGTCATGAACCAGGGATCCCAGAGGGAGTCTTTCAAAGGGCCAGGACAGCACTATGGCCTTCAGGGTCTTG----------------TAGCATCCTTGAATATGTGCTTTCAGAAACAGACTGGGTAAGAGTGCATCAGGTATGTCCTTCAGGGAAGAGATAGCCAAGTTGTCATCCTTCAGCAGGCTCTGAATGGTCAGTTGTATGAGACTGGATGGATTGTCGTAGTTCATATTT----GGTTTCCA i eriEur1.scaffold_215500 I 579 N 0 a score=79010.000000 s mm10.chr5_JH584296_random 133464 1986 + 199368 ATCAGAAGGATCCTGGGGAAGGAGTCAGAAATGCATATACGTTTAAGAGAATATTTATAAA-ACTTCCTCACCATCACATCAACCACTAAGCTTCTGAGTTACTGCTCATGCAATGGTAGAGACATCAATTTACCTCTTCATCCTAAGAC-GTCATAGAAAGACAGTCGCCCACACTGTCATCATGGCAGCCTCTCTATCACCCAAATGGGTATATAATTTTTGGATCAAAA-ATTTTGTTTGTGACACACTCTTTAAAAAAAGAAAGAATGAAAGTAATA---TTGAATTGACAagactcacaggacttaatgtggatggcccaagacaacatgtgcagcacaagcgagatagaaccttaagagaccagcctcagtggataggcatgttccccatgtgagggaagggcccagtcacccatctcaaaatttttaacttagaactgttcccatctaaagaaaaa-cttggacaaaaaatgaatcagagattgaaggaaagaccatccagagactgcataccctgggatcaatcccatcagcagacactaatccccgacactatagttggtgccaagatgtgcttacagataagagccttgtatagctgttctctgagaggctgtgccagcatgta----agacaattgcagacacttataggcaacc-attggactgagccaggggaacacaatggaaggcttagggaagaacagaa-gaggtgaaagagattaaagccccataggaataacaacaatatccactaacttgacccctcagagctctgacggatgaaaccaccacccaaagtttgtacacgggtgcatccacggctctggataaatatgtagctgatgattgaattatctgatatccatgggaagggagatgcttggtcctgtggaggcttgtt-------------------------------ggggactgggtgtgtgtgtaagggagtattgttttagagtcaaagtggatagatgatggtcagcggctgccaaagaaaagactgggaaaaagaacaacaattcaaatgtaattaaataatcaacaaaaaaaaaaaaaaaaaggaaaaagaaaaaagaaaaaaaaaCCCAAAACAAAAATGCAACACACAACAATCATGGAAGCAGTAAacacacacacacacacacacacacacacacacacacacacaacacCCTGT-GTCTTGGATCAATATTGA---TCCACTAAGCATGATGATGACAATGGGTTCCTATAATTTTCAGGGTTTTCTGGGTCCCATATACAGACCATATAAAAAAATCAAAGCTGTGTGAAAGCGATATCAAGCAAAGCCTAATGTAAGACATTGAGTGAGACATTAAGACACTCCAAGTGTAACTCAAGCTATTGTGAGTTAAAGGTGTTCAAAGACACATGGTCCCCTGGTCTCCAG-GTGAGCCAGTGACTCACAAAAACAAGCAC---AAACATTTGAGTGAATGGAAATGTGAGGGAACACACTAGTAATGTTAATACTGAGGAGTCTTATGAGTCAAAAGGTTATTGCTTTTCACCCTACCCAATGCCACATGGCCATTTGTAGGACAGCTTAAACAAAATAG---------------AAAATCAACCATAATAATGAAATCACCTGGTTAACATATACGTTTGTGATGAAGCTAAAACTTCATTTGAAATTAAATCCCAGGTGTTCAATGTATTCCTCTAAGAAGA-AAAAATTAACATGTTTTGTCCTAACTTGGAGTCTAAATGTCTCTACATCAAACCGCATGACCCAGGGGAATATCATTACCTACTAGTTCTGAACACTGTAGACTGGTCTCTGAGTGCTGGTCAAACAAGACGGTTATTCAGGCTGCAGTTCTCTGAATGTGTTCTCTGGCTCCAGTGAAGCCTTTATATACCTCTCTGCTCACCA-CTCCCTTTTGTAGCCACACCCACCAATC-CCAAACTGGAATTGGAGTAAATGATTAAACTCCACCCTTTTAATCGTATTTGTAACATGCAACCTTTTCAGTGATTGAATCAGAGCTCTC s rn5.chr14 99274860 1989 - 115151701 ATAGGAAAGCTCCTGGGGAAGGAGTTAGCAAAAAATATATTTTCTAGAGAAAGACTGTGAACACTTCTTCACAAACACAACAACATTTAAGATTCTGAGTTTCTTCTCTGGGAGTGTTAGAGACATCATTTTACCTCTTCATCCTAAACTGGTCATATAAAGACAGACTCCCACAGTGAAATCATGGGAGAGTGTTGATCACTCAAATGTGTATATAATTTTCTGCTCAAAATATATTAAGTGTGACCATTTCTTTTaaaaatgaaagaatgaaagagagacagtaaaaagggagaaactcccaggaccc-atgtggatgacagtagcttaaatatgcatgagaggggaggataaacctgaagagaccaccaccagtgaatagacatggcttccagttgaagaatggagacactaacccatctcaaaatgtgtaacctagaat--ttactgtctaaagaaaaagcaggggcaaaaaatggattagagactgaaagaaaggccatccagagaccacctaccttgggatccatcccatcaacagacatcaaatcccatcattattgctaatgctaagctgtgcttac--acaggagcccggtatggctgtcctctgaaaggctgtgccaccacctgcctcagacaattgcagacactcacaggcaaccaactttactgaacttgggaatcgcaattggagagatagtgaggaaccgaaggagctgaatcagcttgaaaactcataggaataacaacaagatcaactaacttaaccactcagagctccaacaga-gcaaccaccaaccaaagagt----acaggtgaattcataattccagataaacaggcagcaaagcattgccttatcttgcatgaatgcgaggggag--gcttggtcccatgaaggcttgtttccccagggaaggtggtgctaaaggatgagggaggagtgggtggctggatggggaatcacctcttttgggtcaaaggagaggcatgtttggagtggagttgtggaggggagaccaagaagggggacaatttctgaaacataaatcaataa--aataataaaaaaaagaagaaagaaaaagaaagaacaaaccaatcaacaaagaaaaaactga------aacaagcaaacaaacaataaa-------------------------------agaaacaaaaaaTCCTCCAGTTGTGGATCAAAATTGAATTCCTACTAAGAAGGATGACAACAGTAGGTTCTTAAAATTTTCAGGTTTTCCTGGGTTCCAAAAGCAGACCATATCCCAAAA-CAAAGCTATGTTAAAAAGATGCAGAGCATAGCTTAAGTTAAGACATT---TGAGTAACTCACACA-------TATAATTCTAGGTATTATGAGTTAAAGAGGATCAAAGACACATGGTCTCCAGGTCTCCAGTATGAGCCAGGGTCTCACAAAAACTAACACAAGAAGCATTTGTGAGAATGGAAATATAAGGGAACTTGCTAGATAc-ttagccctgaggagtctgctgagtcaggaggatcttgatatccagcctacccagagccacatggccatttctaggagagtgtgaataacatagaaagacttcttataaaaaATCTACCACAATAATGAAATCAACAGGTTAACCAAGATGTTTGAGATTAAACTAAAACTAGATTTGGAATTAAATCCAAGTTCTTCAATGAGTTCATCTAAAGAGACAGAAATTAAAATGTGTTGTCATATCTTGGAGTCTAGAGG--TCTACATCAAACTGCATGATTCAAGGGAAATCAATTACATACCAGTTTTGAGCACTGCACACAGATCTCTGCATCCCAGAGAAACCAGGCAGCTATTCAGGCTGCAGGTCTCTGAATATTTTCTCTGGCTCCACTGAAGCCTTTATATACCTCTCTGCTCACCCTCAGCCCATTACAGGCACACCCTCCCACCTCCCACCTCCCACTGGAAT--TTGGTTAAGCTCCACCCTTTGAATTCTATGTGTAGTATCCAACCAATTCTTTGATTGAATCAGAACTCTC i rn5.chr14 C 0 I 2202 a score=0.000000 s mm10.chr5_JH584296_random 135450 2390 + 199368 AACCTCATTTCacagctcatgtggggaggttatggaacaagaggaacacatctctattgttgaagagagtgcaaacttgcacaaccacttgtaagatcaatctggcagtttctcaaataactgagattcaatctaccttgtagacccagctttaccactcacagacagaaagccaaagaggacccacaatgccacaaagatacttgcttgactatgttcatagtagcCATCGTTCTACTGAAGATACCTTaaggccttctaaaacacagcagaactgatgcacatatgaatttagagagcttgaagcagcgggcacagggcatgcacaaatttgtaccacatgacagtattgagagaagctcccattccgaacccagaagctgtctccaatctataaagtaaagtcttccaaatgaaacactaaacttgttaaatggaattttttttttttttttggttttttgagtcagggtttttctgtgtaggccaggctgtcctggaattcactttgtagaccaggctggccttgaactcagaaatccgcctgcctctgcctcccaaatgctggtattaaagatgtgcaccaccactgcctggagttaaatggaaattttctgttggatacaaatcctactcttaaaagaagactaattaaccagttgtaggagggaaacaaaacaaactcaaagacaatttagcagatctgagtgttagaaagttgtgttatacacttttgtttatttatattgttctgcttttagattataaattctttctttctgtttttctgggatttctgtgtctttgaatgtattctgtatttctttgggattttttttttgctgttgttgttgatgattctactttatttttttgATGGGGTGGGATTGGCTCTCTTTTTCTGTTGGCTTATTTATTTTGTCCTGTTCCAAGTTGTGTGTTCTTCTTTTCTTTTGATTTTCTGTTGCTCTTTTTGTTTATTTGTTCATTTCTCTGtttgtttttcaagcagggtctcattgtatgttaaactgttctgtacctcacttgctaggccagtctggaggtggtcctgcctcttcctcccctgtcctggcagtacacttgtgttctgccacacATGTTTCTGGAttctttaagtgcctgtttcttttctcaggagagatacaaagggtgtggattgagatggaaaataatgtgggaatgacctcagaggagttgggggagttgaaaccataatcataacacgttgtatgaaaaaaatatttcagtaaGGGAGACGCAAAGAAAAggggagggagatatgactgagtagttagagcactggcttctctaacagatacctcaggtacatatcctagcTTTTGTGTGTCAGGTCCTGTGTTTTTGTCCCCCATGCTCCTAACTCCTGAACTATCTCTTTATCCCATATCTGATTAACATGAAGGAGTGCCAGCTTAGCACATTGTCTACAGATAATGCCACTGAGATAGGAACTAGGCAGGCTGAAGGCTCATACTACACAAAGAGGCAGAGATAGTATCTTCTTTAATTTGCGTGTAGACAGGGTTATAGATGAGGACTATTTCACCTAGGCAGCCATAACGAATAGCATGGGGGTTCATTACAGGAAAGGATCTCAGTATCCAGACTTGATAAGTGAGGTAGTACAGTTTTGGAAGCTTGAAAATTGGGAGCTATAGAACTCTTGATCATGAGAGAACCCACAACATGGAGAAGGCCAGTGGCTCCTTGAATGAGACCCAATCTTGAGGAAAGTGCCTCAAGAGAAGTTGTTCCAAGACTTGTAGCTAGCAAGCCTTTTCATTGTGTACACTGGACTGGAAGGAAACTGATCTATATTCTGTACTTTCATAGGAACCAGTGTCATTGATGCTCTCTCCCTGGAAGAAGCAATTCTGGAATGACCCCTGAGGTTACTCTCTAGGCACATCTGGTAGAGATTTTCAAGATATGCAAAGGTTGAGGATCAAGGCTAGATGTTACCATTGTCCTGTGACAGCCACATTTCTGGAGAAAATCAATGGGAGAGGCCAAGATCATCAGTTCCTTTGGATTTTGAGCCTGTAGTCTCTGGATTTTGCCTGTTAAATTCAATTGTCAGTCAAGGAAGAAAATGGTTGCTCATAGCTTTGGGCAACAAACAGGTGTTGGTGTGACCCTCACAATGTTCCTTCCCAGGTCCTACTGGTGTGGCTCAGAGGTGAAAAAAGAAAGGAATAGTGTGTGCTAGGAAGATGTGAATGGCTAAATACTATAGGCACGGTTGTTGAAGCATCTGCTATATCTGCGTAGGTGGTAGAGAGCACCAAGCTACCAGAATAAAAGTTCTGGGCACCTGAATAGCAAGGGGGTTAGAAGTTTCATGG e rn5.chr14 99276849 2202 - 115151701 I a score=18812.000000 s mm10.chr5_JH584296_random 137840 434 + 199368 CCAAACAGAGAATAGTGCTTAGTAACAGGATCTCAGCCACAGTCAGGTCCAGAGGAAACCCTCAAACAAAGACAGATGTAAAAAATACCCCCCAGACCCCCCACAAACAAACAAGAAACAAACCAGATCAAGAAAAACTTTGAGACTTTCCATTCTTCTACTCTGATGAGCATGGAACAGAAGGTCAACCTCACCAGGACAGGGCTCCTTGAACCTTGGTGC-AACAATACTACCCAAACAACAGATTCTACTG-----------TGCATGAAATTCCCCAAGGACAGCCTGGACAAGCTGCTCAGAGGAACACAGGTCAATTTCAGAAAATCTCTAGAAAAAAACTTATTGCAATATAATATGATCAGGGATCTATTGTCTCCCATTGAGCACAAAGCCTGGACCTGAAGAAAGCT-TTTGCCCACCATTGGGTATGTATACAAAG s rn5.chr14 99279051 440 - 115151701 CCACACACAGAACAAGGCTTGGCAGCAGGATTTCAGCCTCAGGCCGATCCTGAGGACACCCTCAACCAAAGACCGAACTCACGAaaacgaacaaa----ccaacaaacaaacaa--acCAAAACAGAACAAGAAATTCTGTCAGGCCCTCCATCCTCCTACTCTGAAGTGCATGAAACAGAAGATCAAAGGCACCAGGACAGGGCTTCCAGTATTTTTGGGCAAACCATACTGGCCAACCAATTGAATCTAATGTGCTCCACCCTTGCATGGAATTCTTCAAAGTCATCCTTGGCAAGCTTCTCAGAGGGACACACGTCAATGACAGAAAA-CACTAGACAAAAGCTTGTAGGAATATAACAGCATCAGGTGTCTATCCCTTCCCATTGAGCCCAAAGCCTGGACTTGAAGAAACTTATTTTTCCACCACTGCCTATTTAGACGAAG i rn5.chr14 I 2202 I 49 a score=0.000000 s mm10.chr5_JH584296_random 138274 477 + 199368 CCTCCATTCCAACTCTGAGGTGTGACATTGTTTATGCATGCTGAAAAGTGTGTAcacatcagtgtctgagtttggtgactgtaaatgggatggatcaccaggtgagccagtctctagatggtcgtttattcagtctctactccacactttgagtctgtatctccttccatgttcccccttttgtccaccccctttaagatagataaaagatccacactttggtcttccttcttcttgagttccatgtggtttgttaattttatcttggctattctgagcttctggtcttctggactaatatccacttatctgtatgccccagtgtggggaaatggcagggccaggaagcaggagtgggtggattggtaagcagggggagggggagggcataggggaagggtgtttttcacaggggaaaccaggaaaggggctaacatttgaaaatgtaaataaagaaaatatccaatgaaaaGGCGG e rn5.chr14 99279491 49 - 115151701 I a score=9802.000000 s mm10.chr5_JH584296_random 138751 179 + 199368 GTCATTGTCTTTATCTCTAGACAGTGGTACTTGTGGCTCTTTCATTAAAAACTGTAGTGCCTATTAACTCGGCAAGGTCAAT----GCCCCTAGGCTCCAGAATTCCCTGGTCATGAGCCCCATC-----CAGCTCAAAGTCTCCTTTCTCTTGGTCCCATTTTACTCTGAAAATCTTTCTTTCTACT s rn5.chr14 99279540 188 - 115151701 GTCATTGGGTTTTTCTCTGGCTAGATGTACTTGTGGCCCTTCCATTAATAACTGTGGTGCCTATTAGACTGTCAAGGTCAGTTCTAACTTCTGGTCTCCCCAATTCCCTGCTCCTGAGCTGCACCCAGCTCAGCTCAATATCTCCTTTCTCTTGGTCCCATTTTACACTGAAATTCTTTCTTCCCACT i rn5.chr14 I 49 T 66843 a score=0.000000 s mm10.chr5_JH584296_random 138930 115 + 199368 TTGGATTTCTTCTTTCTTTTCCAAGGAGATCTCATTAGCATTTTGGAGAAAGCCTTTTTTTCTTGACCCAAGGAGTTTTACTGCAGATATTTTAATTCATGAAGCCAGAACAAGA e rn5.chr14 99279728 66843 - 115151701 T a score=96851.000000 s mm10.chr5_JH584296_random 139045 2199 + 199368 GGCTGAGCTGCCAATCAAACACCCAGCTCCCATTGTTGGTATTTGAATGGGAGACACAGAATTACATTATGTAGT----------------TTGGGGGTCATCCTTCATCAGTCCACTGAAACTTGCACCACCACCCTTGAT-AGCTCTCCTGCTCTTCTGTACATGCTGACTGTCTTAGTTCATTTGTGAATTGGTGGATCAGCTAGGGAGTGTGCATGTAGAGT-GGGTGGACTGTAAACTGAAGTGGTCTCTGTCAGTACAGCTGTGGTTACCACTACTGAACtcaggcttgacagcaagtgccgttcccctctgagccaactcactggctcTTAAGCTCCCTTGAAGTTA--ATTTAAGAATTTTATTT----TGTGTTTTGGG----------TACTTTTTTGTTTGGTTTTTGTCTCTCTGTCT------------GtttgtttgtttgactgatttttgacagggttggtcagtttacccatctctggttcttcctgaactcacgttgtatactagattaaccttgacctcagagcttctcctgtgtctacctacctaatcctgggttttaagtctgcacctgcaccatctggGAAATTTCATCTTGTTTGTGTGTTTGttttgttgtttttagacagggtctctttgtttaaaagccctaaatgtcccataagccactctgaggagcagtctggcctcgaaatcaaagatgctcctgcctctgactgtagtgctgggatttatgccctgtgccaccctgcccagctCTGGTTTAATTTTGTGAAAGATCCTCACTCCATAGATTTCACTGGTTGGGGTTTAGTTATTAAGATAAGGGTAGCTCTGAACTCCCTGAATCAGTCAAACTTTGACTCCTGAGGGGAGGGAATCAATGTGTATGCTCCCATTCTCAGTATAAATGTATTGTTTTAGTAAGAtttgttctatgtgtaggggtgctttgcctacaactatgaatgggcagccctctcatggctgctcccctagaaggtcagaacgcagtttcacaact-gctggaactggagtcacagatcatttcaagccaccatgtagatgataggaatagaaggttgacaggtgttccttctttctaagccaagtctccagcccAAGACCCAC------------ATCCCTGAGGAATTTTGTTAGGCTGATCCTACTTGTCATAATCTAAGTTGCCTGAGCAGCCAAGGGCACCATTTCCCTT--------------------------------------------GTCTTTTAGGGATcagactatacttcagcttacagtttggctgaagatgacattaaaatgagcctcctacctcccacttccaattttgagcttaccagcatgccccatcttgtctgttgcacagagagttttagagaggaatctttgaatgctgggtagctccctaccaactgagtacacacacaacaccCTGGCCACTATAGTAATGGAATCAAGCCTTGCTCCTGCCCTACCTTTTGTGTGGCTGCTGCTGCAGTTTACTGACAGAACATCCACTTCAGCCCTTGAGCTCCAGTACCTATTCCTAACTCTGACTCTGTATTCTGTCCCAAATCCAGCTAAAAAGAATACCTTTGAATTATGGTATGTCTCTGATCAATAACAGATTAAACCCTTAGCTGATGAAAACTAAAAATGACTCTGGTCCCATGAATGAAATCCaaccagatgtgtttattcataacagtaatcctagcaataagaaggattctgaggcagaagaatttctaga-attagacttctaaaacacccttggcttctgagcatgacAAGACCCATGGAACAAATTGAAAACTAAGTAAACCTTAAGTAAATGAAAGAACAAATAAAAAAACTTGATGTTATATGGTTAATTAACAAGTGGAATGTTCATATTTATCCATGAAACCTTTTGGGGGGGGGTGAGGAA---------------GAGTGGAGAGTATGTGAATACAAGTCCTTCTGATTTAACCGATGAAATGATTAGATCTTTGATCTGGAATTTGAAGGGTGGAGATTAAACCAGGAAATCCAATTCCAGTT-TTGGTTGAAGGGTGTGGCTAAAATAGGGAGGGGTTAGCACAGAGGTATATAAAGGCTCCAGTTGATCCAGAGAACACACTCAGAGACCTGCAGCCT-GATAACTGCCTGGTGCAGCTGGGACTTGGAGACCTATCTGCAGTGCTCA-ACTGGTATGTACTGGTTTTTCCTTGGGTAATGCTGTTTGATGTAGAGAAGTTTAGACT-------------------------------TCTTTAGAGGAACAGGTT s rn5.chr14 99212885 2298 - 115151701 GACTGAGCTGCCTATTTAACACCCAGCTCTGATTGTAATTATATGTTTAGATGAGACAGAATTACATTTTGTAGTCTAGGCTAGACTCAGTTTTGGGGCCTTCCTTTCTCAGTACCTTGAAGCTTGCATCACCACCCTGGATCATCTCTGCTGCTGTTCTCTCCATGATGAAAATCTTAGTTCATTTGTGTTTTGGTGTGTCAGCAATGGAGCCTGCATGTAGTGTAGGGAGAACTAGAACCTGAACTAGTTTCTTTCAGTATACCTGTGGTTATCATTAGTGAATTCAGGCATGGCAGCAATTGAAATTCTAGTCTGAAACA-CTCACTAGCTGTAATGTTCTCTTAAGGTTTTTATTTAGAAATTTTGTTTGCTTTGTCCATTGGGGAAATTtttttgttttcttttttgtttttgatttttttgttttctgttgttgtAGTTTTTTGttttgttctgctttatacagtgtttgtttgttta---aaagctagttgttcctgaactcacagtgtacaccaggctgaccttgacctcacaggtccacctgtttctacctccctattgctagggttaaggcctgtacaggaaccactgcGTAAACCATACCTTGTTTAAGTCTTTGttttcttgttctgagaataggtatctct-tttaagagccctac-tatctcgcaagccactctgtggactgatttggcctggatctggatgatccctctgcctctg-----------------tctcctcagtgcCCCCTTTCCCAGCTCTGGTTGAATTTTAAGACATACCCTTACTCCAAAGGCTTCAC--------------------agataaggctagccctgagttcactgaatcagtcaaccttcggctcctgagtggaggaattaaatttgtgtgccaacattcccaacATAGATGTACTGTTTTAAGAAGGtttattctatgtgtaggggtgttgtgcctacaaatatgaatgggcatcactcacatgcctggtgccaaagaaggtcagaagtgtgtttcagattttggtggaactggagtcacagaccaactcaagcgaccctatacgtgatgggaatagaggactgacaggttctcGATCTGGGTCAGGGAACTCTAAAGCCCATATCCTACTCCAGGCATCATCCCCTTCAGTAAGTCTGTTGGGCTGATCCTACTTCA---AATCTCTGTTTCCTGGGGTGTCAAGGGCAGCATCTCCCTCAGAACCTACTTTTTTCTTTGTTTTTTTGTCCATTTACAGAGCAAGTTTTGTCGGGCTCTTGCTATTCTTCAGCTTACAATTTGGCTGAAGATGACTTTTAGCAGAGTCTCCTACCTCCAACTGTCAATTTTCAGCTTAGCAGCATGCCCCATCATGTATGCTGCACAGAGAGTTGGAGATAGGACTCCCAGTATACTGCTTGACTTCCTAACATCTGACT-CAGACACAGCATTCTGGCTACAATAGTTATA-AAGCAAGCCATGGTCCAGTTCCACCTTTTGT-TGGCTGCTGTGGCAGTTCATTGAGAGAGCATCCACTTCAGTCCTTGAGCTTCAGTACATATTCCTTTCTCTGATGCAGTGCTTGCTTTCAAATCCAGTGGAAAAGAATATCGTTGAATTATTTTATGTCTTTAAATGGCTGCAGATTAAACCACGAGCTGAAGCAAAGTGGACATGACTCTGGTCCCATGAATAAAATTCagccagatatggttattcacaacagtaatcccag-gataagaaggattctgaggcatgagtactgctagaccttagacttctagcacaaccttgtcttcagagcatgaaccagtccctgaaacacaTTGAAAACTAAGAAAACCTTAAGCAAATGAAGGAACAAATCAAAAAACGTGGTGTTATATGGTGAATGAACAGGTGT-ATGTTTGTACTTAGCCAAGAAACTTTTTTTATGGGGGGCAAGAGGGCAGGGCTTGTCATGAGTGGTGAGTATGT---CACAACCCCTTCTGATTCAATCAATGAAATGATTGGATGTTTGCTCTAGACGTAAAAGTGTGGAGATTAAATCAGGAAATCAAAATGCAGTTCCCAGTTGAAGGGTGTGGCTTCAATAGGGAGGGGTGAGCAGGGAGGTGCATTAAAGCTTCAGTGGAGCCAGAGAACACACTCAGAGACCTGCATCCTGGAAAACAGCCTGGTTTGGCTGGGACTCAGAGACCTATCTGCAGTTCTCAGACTGGTATGTAATGATTTTCACTTGGGTCATGTAGTTTGATGAAGAGAAATTTAGACTCCAGGATAGCAGAGAAATCTTCATTTCTATCTTGTGAAAGGAACACATT i rn5.chr14 T 66843 I 76028 a score=11226.000000 s mm10.chr5_JH584296_random 141244 235 + 199368 GAAGACCTTGGGTTTCATTCCAATTGAATTTTTAGCCTTATCACCGATATATTTCTGTAGCATCACTGATATATTTCTATAGCTTGCATAGTTCATTAGTGTGTTTCATAAAAT-TTTTGAGACAAGTATTCTGTATCTTGTTCAAACTCTCTTAGAACTGGCCATGTGGCTCCTGGGAAGCTGGAAAGCAGATCATTCTGACTAACCTGTTCCTTCAGGTTTCCTCTTCACTGAA s rn5.chr14 99291211 216 - 115151701 gaaGAGCTTGGATTTCATTCCAAATGATGTTTTAGGCTCATTTCCACTATATTTCTA-------------------CTATAGCTTGTATATTTCATTAGTGTGCTTGATATAATGTTTTTCAACAAGGATTTTTTATGTTGTTCAAACACTCTTAGAGCTGGCCATGCGGCTCTAGATAATCTGGAAGTCAGATCATTCTGACTAAGGTATTCTCTCATGTTTTC-CTTCACTGAA i rn5.chr14 I 76028 I 28 a score=0.000000 s mm10.chr5_JH584296_random 141479 114 + 199368 TTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgGTgagagagagagagagagagagagagagagagagagagagagagagagagagagagaCAGG e rn5.chr14 99291427 28 - 115151701 I a score=11377.000000 s mm10.chr5_JH584296_random 141593 282 + 199368 CTCTGGGTCACACTGTAGACCTGTACACCATGTATCTTTGGTTTTCTTCAATGCCCAATTGCTCAAGTGAAACTTTTGAGTTATGCATATGTATTGCCTTAGGCTTTGCGTTTCATCTTTTCCACATAGCTTTCTTCTGTGTACATGATCTGCTTACCAGACCCAGGAAACCCTAAAAATTGTAGAAATGTACTGAAGTCATTCTGCTTACTGGGAATTAATATTGATCTGCATCACAAAGATGTATGTTTGTTTTTTTGGTTGGTTGGTCAGTCGGTTGGt s rn5.chr14 99291455 274 - 115151701 CCCTGGCTCATACTGTAGACCTGAAGATGATTTATTTTTGATCTCCTCCAAC-TCCAATAGGTGGTATTACTCTTGTGAGTTACTCCCATGTACTGGCTCAAGCTTCAGTTGCACTTTTTAACACATAGCTTTGTTCTAT--ACATGTTCTGCTTCCCAAACACTAGAAACCCTAAAAACTGCAGAAATGCACTGACACCATCCTGTTTTCTGGGAATCAGTATTGATCCACATAACCAGGCT-----TTTGTTTGTTTAGTTGGCTGTATGGTTGGGTGGT i rn5.chr14 I 28 C 0 a score=0.000000 s mm10.chr5_JH584296_random 141875 192 + 199368 tttgtttgattttggaatttttttttattattttatgtaagtacactgtagctgtcttcagacacaccagaagagggagtcagatcttgttacggatggttgtgagccaccatgttgtttctgggatttgaactctggaccttcggaatagcagtcgggtgctcttacccactgagccatctcaccagcccc e rn5.chr14 99291729 0 - 115151701 C a score=29569.000000 s mm10.chr5_JH584296_random 142067 678 + 199368 TGGAATTTTTTTTTAAGAATGTTTTTGAGAAAGGGTCACACAAAAAGTATTTTGATTTGAAA-TTATGTGCTCATTTGGTTTTTAGAAAGACCCCGGT--------TGTGGGAGTCTGTCTTTCCACCACCAGTTTAGGTTGAAGAGGTAAATTGATTTCTCTGTCACTGTCAGAGTAGTAACTCTGAAGATTAGTGGTTGATGTAATGGTGAGGAAGTTTTACAAACTTTGTCTTGAAAGTATATTTTTTTCTGAATCCTTCCCAAGGAGCCTTCTGACTGGAGACTGAAGAGGATGAGTGTTCAGACTCTGTCCACTCTCCAGAATCTGACATTGAAGGCTCTGCTGAGAGATGAGGCTTTGGCCTTGTCCTGTCTGGAGGAGGTGCCTTTTCTGCTCTTCCCAGCACTGTTCCAGAGGGCCTTTGCTGGCAGACTTAAGAAGCTCATGAAGGCAATCATGGCAGCCTGGACTTTTCCCTGTCTCCCTGTGGGGGCTTTGATGAAGTCACCTAACTTGGAGACCTTGCAGGCTGTGCTAGATGGAATAGACATGCAACTGACAAGAGAA-TCTCACCCCAGGTGCGTAATAATCAAGTCGTCTATAAGGGATCATTTGGGT-ACACAGTAGAGATTGTGGGTTCAGGGAGAATGGCTTCTGATGGGATCATCAGACAGTGGTGCAGG s rn5.chr14 99291729 669 - 115151701 TG--ATTTATTTTCAATTTTGTTTTTGAAAAAGGCTCATA-------TATTTTGACCTGAAAATTCTGTGC-CATTTGTGTGATAGAAAGGATCCCATGATACCATTTTGGGAGTCTGTCTTTCCACCCTCAGTTTAGGATGAAGAGGTAAATTG---TCTTTGCCACTGACAGAGTAGTAATTCAGAAGCTTAAAGGTTGTTGTGATTATGGGGAATTTT--ATAACTTTGTCTTGAAAGTATATTTATTT--GACTCCTTCCCCAGGAGCTTTCTGACTTGACACCTAAGAAGATGAGTGTTCAGAACCCGCCCATGTTACAGAAGCTGGCAAGGCACAGTCTCCTAAGAAATGATGCTGTGGCCATGTCCTCTCT--AGGAGCTGC-TATTGTGCTTTTCTCAGCACTGTTCAAGGAGGTCTTCCAGGGCAGATACACCAATATCATTAATGCAATGGTGGCAGCCTGGCCTTTTCACTGTCTCCCTGTGGGGATAAAGATGAAGACACCACTTCTGGAAACCTTGAAGCCTGTGATAGATGGATTAAACATGTGAATGACAAAAAAAGTTTCACCACAGATAAGGAGTAACCATGTACGATAGCAGGGGACACAGGGCTTACACATTAGAGATTATAGGTTCAGGGAGAATGTTTTCTGATGGGATCTTCAGACATCAATGCAGA i rn5.chr14 C 0 C 0 a score=287.000000 s mm10.chr5_JH584296_random 142745 15 + 199368 AACCTTGAAG-CTATT s rn5.chr14 99292398 16 - 115151701 AGTCTTGATGACTATT i rn5.chr14 C 0 C 0 s ochPri2.scaffold_2607 174736 15 - 183216 TCCCCTAAAA-CCCTT i ochPri2.scaffold_2607 N 0 I 106 a score=2478.000000 s mm10.chr5_JH584296_random 142760 111 + 199368 GTCT----TCTTGGACTAAGGACAGTTGTAACTGACAGTTGTCAGTGGATTACAGCTTACTCTAA--GTAGCCT----GTAGAATGAGCTTATTCCTGGTTTTCCCACAACCACTATTAAT s rn5.chr14 99292414 108 - 115151701 GTTTGTTTTCTTGGAATAAGGACAGTTGT-------------CTTTGCTTTAGGGCTTAGATTAGAGGTAGCCTCATGGTAGAATGAGCCTAATCCCAGCATTCCCATAAGAAATAATTAC i rn5.chr14 C 0 C 0 e ochPri2.scaffold_2607 174751 106 - 183216 I a score=450.000000 s mm10.chr5_JH584296_random 142871 14 + 199368 GGGACTAAGGAGAA s rn5.chr14 99292522 14 - 115151701 AGGAGTAAGGAGAA i rn5.chr14 C 0 C 0 s ochPri2.scaffold_2607 174857 9 - 183216 --GGGGAAGAA--- i ochPri2.scaffold_2607 I 106 I 1224 a score=48255.000000 s mm10.chr5_JH584296_random 142885 831 + 199368 ATAAAGAGTACCTTAGTGGAAGGAAAGTGGTCAGGTCTACACATGCAGCTCAGGGAAAGATTCTGTAGCATGCTTGTGTGCACATTGCACTCT-GTTTCAAGAAATTATACCTTACCAAAGTTGGGGAGACTTGAGTTTAGAGTCAGGTAGTCAAAGCTGACTGTGGGTA--GTCATGTCTGCTGACATTTGACATGTTTCACTCCCGACAGGGGAAAACTTCAGGTTCTGGACCTGAGGAATGTGCACCATGCCTTCTGGGACATATGGGCTGGTGCAGAGGATGGTAGCTGTTCTTCAGAGCCCTTGGATGAGAAGCCTACAGTAGTGAAGGTCCTTCGCAGATATGCAAGGAGGAGGCAGCTGAAGGTGGTAGCAGACCTGTGCCTCAGGCCCCGCCGTGATGAAACACAAGCATACTTCTTGAAGTGGGCCCAGCAGAGAAAGGACTCCCTACATTTGTGCTGTATAAACATGAAGATCTGGGCTATGCCCGTGGACTTTGTCTTAGAGATTTTGAATGTCTTTCATCCAGAGCACATCGAGGAATTCGAACTGAACACTGAGTGAAATGTGTTCAATCTGGCCCGTTTTGCTCCCTGCTTATGGCAGATGAGAAATCTTCGCAAACTTCTCCTGGCACCCCTCTATAAGAATGTCTTCAAGATTGCCAATAGGACAGGAGACAGAAAAGATAAGTGTGTCAAGGAGTTCGTTTCTATCTTCTCCAAATTCAATTGTCTCCAGCATCTCTCCATGCAAGGTGTCCACTTTCTCACAGACCACATGAGTCAGGTCTTCAGGTAAGCAAGGATGGAGATCTGAGTTACCTAG s rn5.chr14 99292536 821 - 115151701 ATA--GAGTAGGTTAGCGGAAGGAAACTGATCTGGTATACAAATGCAACTCAGGAGTAGCTTCTGTAGCATGCATGTGTGCACATTACACTCTTGTAGCATAAACGTACACCATGGCAGGGTGGAGGAGACTGGAGTTTAGAGTCATGTAGTGGAAACTGACAGCAGATCTTGTCATGTTTGCTGACACTTCACCTGTTTTATTCTCAGCAGGGGTAAACTTTAGGTTTTAGAACTGAGAAATTTGCACCACCCCTTCTGGAACATATGGGCTGGTAAGGAGGATGGCAGCTGTTCTTCACAGACCTTGGATGAGAATCTT---GTAGTGAAGGTCCTTCCCAGATAGGCACTAAGGCAGAAGCTGAATGTGGTAGCTGAGCTGTACCCTAAACTCTGCCTTGATGAAGCACAAGCATGCTTCTTAAAGTAAGCCCAGCAGAGAATGGGCTCCTGGAATTTTTGCTGTATAAAGCTGAAGATCTGGGCCATGCCGGTAGAGTTTATCAGAGAGATTTTGAATGTCCTTCATCCAGAGCACATTGAGGATTTGGAACTGAACACTGAGTGGAATTTCTTCAAGCTGGTCCATT----TGCTCTCTTTCAGTAGATGAGAAATCTTCACTAACTATTCCTGGCACCCCTCTACATGAACGTCTTCAAGATTGCCAATAGTCCAGG----AAAGAAGGCAAGTGTGTCAAAGGGTTCGTTTCTCTGTTCTCCAAATTTTATTGTCTCCAGCATCTTTCCATGAGTGATGTTCATTTTCTCACAGAACGCATGAATCAGGTCTTCAGGTAAGCAAGGGTGGAGGGTTAGGCCACCTAG i rn5.chr14 C 0 T 76082 e ochPri2.scaffold_2607 174866 1224 - 183216 I a score=8297.000000 s mm10.chr5_JH584296_random 143716 232 + 199368 CAGAGCATTT-TTTCTTGTCCGTTTTAAGGATTATTCATGTACAATGCCTGACAGTCAGCCACCTGGAACAAATT-TTAGGGACCTTTTAGAATATGGCCGTTATGTGTATTGATTCAAAGTCTCAAATAATTACTCCTGAAGCAAAAGACTGAAGGGAGGTAAGGAGTAGCACAGATCTGATCAGAAGAGACTGTAATTCTTCTTGGAGTCACAGCCAACAAAATGATCAGAA s rn5.chr14 99217275 234 - 115151701 CAGAGCAAACATTCCTCTTCCATTTTCAGGTTTAGTGGTGCAGGTTGTTTTTAAGTCAGTCAATAGGAACAAAGAATTTGGGAGTCTTTAGACTAGGGAAGTTGTGTGTAGTGATTCAAAGTCACAAATGAGCTGTTCTGAAGTAGAGGATTGAAGGAAGTTATGCAATAGTTCTGATCTGGTCAGGAGGGTTTGTAATTCTTTTTGGAATTGTAGGTAAGCAACAGCCCAGAA i rn5.chr14 T 76082 C 0 e ochPri2.scaffold_2607 174866 1224 - 183216 I a score=0.000000 s mm10.chr5_JH584296_random 143948 182 + 199368 GCgctggccagtggtggcacatgcctttaatcttagcacttgggaggcagaggcaggtggatttctgagttagaggccagcatggtctacagagtgagttctaggacagcccggctatacagagaaatcctgtctagagaaaaGGAACAAAATAATCAAACAACCAACCAAACAAAAATGAT e ochPri2.scaffold_2607 174866 1224 - 183216 I e rn5.chr14 99217509 0 - 115151701 C a score=-93.000000 s mm10.chr5_JH584296_random 144130 3 + 199368 CAG s ochPri2.scaffold_2607 176090 3 - 183216 TGA i ochPri2.scaffold_2607 I 1224 N 0 e rn5.chr14 99217509 0 - 115151701 C a score=0.000000 s mm10.chr5_JH584296_random 144133 1 + 199368 A e rn5.chr14 99217509 0 - 115151701 C a score=9435.000000 s mm10.chr5_JH584296_random 144134 397 + 199368 AGGGAACAGAGAGTTAAGGTTGTAGTTAGGAGCTGGGGGAGACCAT-CAAAGTGAGGAGGTTAGCTCTGTGCTAAGATCTGTGGGAACAGCCTAATATCTTCCCCTACTTTCCCATG--------GTTTTGAGCCCCAGTACTGTGGAGTACAAGGGATATGAGGGATTGTGTGGAACTGTAAGGGATAGCAAGAGTGACTGTTCAGAAACTTGGATGAAATGCAGCTTTGAATGAGCCCACATGTAATGTCCCTAGATCCTGTCAGGACTCTTTTGTCACAGAACTTCCTCTATGT--------GTCTTATGGGCTAAACTGGTTTTCTGTGTGGGACTGAAGCCAGCAGATTAAGTGTGGGTGA----------------------------------------------CCTTGGGTCACCTGGTCCCTTCTACAACTGTATAAACTGCATTCCACG s rn5.chr14 99217509 442 - 115151701 AGAGAAAGGGAAAATGAGCATGTAGTTAAGAGTGTCAGGACTCAGCAGAAAGTAAGGAAGGGAGCTCTCAATGGGGTTCTGTGGGAACAGTCTTCTATCTTTCCCTAAATTCCCATGAATGAAGGGTTTTGACCGACA-TAGGACTGAGTGACTGGGGCCTGAGG----------------AAAGGAAGACTAAATCGCGTGTTCAGAGCCTAGGAATGAATGCATCTAAGAGTGAGTCTACAAATAAT-TCCCTAGATATAGTCAAGAATATTTTAGCATAGAACTTTTTCCTCTTATAGCATGGTCCTGTAGGATAAATTGCTTCTCTGCTTGAGACTGAGAGCAACAGATCAGCTGTGGGTGTGAATGGACTGATTTTAAAAGGAAACGTCTTTCATAATATCTTTGATCATTTGGCCACCTGGTCCCTTCTTTGATTTCATAAACCCCACCCCACA i rn5.chr14 C 0 C 0 a score=1055.000000 s mm10.chr5_JH584296_random 144531 20 + 199368 CTCTCCATCACCACTTGCCA s rn5.chr14 99217951 20 - 115151701 AAACCCATCACCAATTACAA i rn5.chr14 C 0 C 0 s eriEur1.scaffold_306392 3686 20 - 17895 CTCTCCTCCAGCATCCTCCA i eriEur1.scaffold_306392 N 0 I 542 a score=35259.000000 s mm10.chr5_JH584296_random 144551 548 + 199368 GAACTAACCATCTGGTCTCACTTATTCCTAGGTGCTTGATGACACCCTTGGGGTCCCTCTCCATCACTCACTACCAAATTTCACAGTCAGACTTGGATTCCTTCTCTTGCTGTCAGAGTCTCTTTCAGCTAAAACATCTGGAGATGAAAGGCGTGGTCTTACAGGTTTTGGATGTGATGCCTCTGAGAGGTCTCTTAGAGAAAGTGGTAAAAACTCTTGAGACTCTGAATTTGCAGGGATGTAAGCTGAAGGACTCTCAGCTCAATGCACTCCTACCTTCCTTCATACAATGCTCTCAGCTCACCAAGGTCAACTTTTACAACAATGACTTCTCCATGCCCATTCTGAAGGACCTTTTACAGCAAACAGCCAACTGGAACAAGATGAATGTGGAACAGTACCCTGCCTCTCTGGAGTGCTATAATGAGTTGGGACATGTCTCTGTAGAAAGATTTGCCCAACTTTGTCAGGAACTCATGGATACACTAAGGGCAATAAGGCAGCCCAAGAGCCTCTCTTTTGCTACACGTATATGCCACAAATGTGGT s rn5.chr14 99217971 543 - 115151701 GAGCTAACATTCTTGTCTTCTTTATTTCTAGGAGCCTGATGACACCCTTGGTGAAACTCTCCATCGTGCACTATGGAATTTCACAGAAAGACTTGGATTCCTTCTCCTGCTGTCAGAGCCTCTTTCACCTAAAACATCTGGAGATGAGCGGTGTGAAGT-----GCTTTGGATATTATGCATCTGAGAAGTCTCATGGAGAAAGTGGCAGATAATCTTTAGACTCTGGATTTGCAGGGGTGTAGAATGAAAGACTACCAGCTCAATGCCCTCCTACCTGCCCTCACACGATGCTCTCAGCTCGCCAAGATCAACTTCTACAACAGTGACTTCTCCATGGCCATCCTAAAGGACTTTTTGCAGCACACTGCCAACTGGGGCAAGATCAATGTGGAACAATACCCTGCACCTCTGGAGTGCTATGATGAGTTAGCTCATGTCTGCAGAGAAAGGTTTGCCCAACTTTGATTGGAGCTCACGGATACGCTTGGGACAATAAGGCAGCTCAAGAGCATTTCTTTTGCTACAAATATGTGCCACAAATGTGGT i rn5.chr14 C 0 C 0 e eriEur1.scaffold_306392 3706 542 - 17895 I a score=38.000000 s mm10.chr5_JH584296_random 145099 1 + 199368 G s rn5.chr14 99218514 1 - 115151701 A i rn5.chr14 C 0 C 0 s eriEur1.scaffold_306392 4248 1 - 17895 G i eriEur1.scaffold_306392 I 542 N 0 a score=43592.000000 s mm10.chr5_JH584296_random 145100 1230 + 199368 AGTGCTGTGTCTATGGCAAGAGAGCCAGACTTTGTTTTTGCTGGCGGTGAACATGGATTCAGAACTTCTGCATGTGAATAAATGACAGTCTTGAGACACATCTCTCATCTGGGGTGCTCAGAGAC--TGACTTCAGGCAATGTACAGATACTTGGAAAGGAAAG-GATGTGCAATAATTGGGATCTTGGAGGCTAAGCTTGACATGGGGAGC------------------------AGACTTGTGGACTGACAAAGGCAACTTGGATGTTTTGAATTGACTCTGCCAGGACAGATTAACTAGATCCTTTGTCATGGACTTGTAAACTTTTTGTTCTTCACTGTAATATATAATTGAATAAATAGAACATGGGTGCTTTTTTAGATGTTATTCCTGATGTCTGAGTAGAATAAAATATCTAACTTTAAGCATTTTG-AGCAAATGTCCTCTGGAGAGAGTCAAAATGAACACATGGATGCTA-GCATGTCATGATTCAAAATCTGGGATAGGTGGATAAAGTTATCAGCTAAGGTGGTTCACATATGGATATCTAGGTTGGCCGGTGGTAAAAAAAAATTCATAAACCCAATCTCTGTGTCTCTCACACTCCTTTTTCCTTCCTTCCCCTCACCCTGTCTCCCTGTCTGCCTGTCAACTTCACAGGCCTTGTTGCTTGGAACCTATGAACCTGCTGGAAGTTTGCTCACAGAAAATTCCTTTCATGCTCTTCAGAAAAATAAACAAATCAACAAACA-----AAAGCTCATGAGCCCAAAAAGGCAATGAGCCAtg-tttaatagtacatgttgctttagaagagggcaga-------ttttgatttcagaac---tatcatcagatgccta-cagcagtaactcaggcttcaagtgttaatctcatttcttcagacatctgtggatcctagcatttacaagcaccatatgtacaataaaTCTGCATATACACAAAATTGAGAACATCTTAGAGAAAGTCACACCATTTCACACAGGTTTCAGAAAATGAAGTAATTGATTAAAATGATATTGGTCAGTAG----CAGTTCCCAGAGTTTTGTGTGCCTCCAATGGTATTCCCCTCTACCATAGTGTGAAGAGAATGTGTGAAGTTTCAGGTGTTTTCATTGAGCTTAATTGGGGACCAGTAGCCCAGTTTGTTCTGTTCTCTGGTTTGAAGCCTGCACCTTAGAAGGGTGAAAGAATACTAGGAGTTTGTCCTAGAACAATATCTGTCTATTTGCCTGCCAGTCCTTTTC s rn5.chr14 99218515 1255 - 115151701 TGCAGCGTGTCTATGGACGGGAGAACAGAAGTTGTAGTTGCCGGCTGTAAACATGGGTACCAGACTACTAGATATGAATAAATAACAGGATTCTGACACAACTCTAACCTGGGGTGCTCACTGATTATGATTTCAGACACTGCTTATATGGGTGAAAACAAAAATCATGTACAGAGACTGGGATCTTGGAATCTAAGCTTGACAAGGGAAACTGTCTGATGGACCGTGGGAATAGGGGCCTTGTGGAGTCAGAAACAAAACTTGGCCATTTTCACGATCTGTAGTCTGGACAGAGAACGTAGAGTCTTTGTAGTTTACTTTTCAACTTTTTGTTCTTCACTGAAATAT-TCAGTGAATAACTAGAGCATGTGTTCTTTTTTAGATGTCATTAATGTTGTTATATTTGAATAAAGTATCTAAATTAAAGGATTCTGTAACAGGTACCATCTAGGGAGGGTATAAATGAACAATTTAATGCCAGGCATGTACGGATTCAGAATCTTGGGCAGGTGGATAAAGTTATCAGTTAAGGTGGTTCATATATGGAAATTTAGG-TGGCCTGTCATACAGAAAA--TGATACAAACAACCTC--TGTTTCTCACACTCTTTTTCTCTTCCTCCTCATCACCCTGGCTACTTGACTACCTGTC-ATTACACAGGCCTTGTTGCTTTGAACCAGTGAACCTGCTGC-TCCTTGCTCACAATAAACTCCTTTCATACTCCTCAGATAAATAAAGAAGCAAACAAACAGCCAGAGAAGCCATAGACT---AAAGGAGATGATTCTTGTTTTCAGAGCACATATTGCTTTAAAAGGTCATCAAAGTTTTTTTTTTTTTTCAAAAGTAATACCATCAGGTGGCTCTCAGCTATAACTCAGGTTTCAGGAGGTAAGCCC--TTTTTCAGGCCTCTGTGGATCCCAGCTTTAATATTCCCAATATGCAGAAT--ATATGTATACCCACTTAATTGAGAAAGTCTTGGAATAAACC-CTCGATTCAACGAAGACTT-AAAAAACAAACTAATTATTTGGAGTGAAGATGTTCAGTAAAGTCTGCTTGCTTGAATTTTGTGTGGCT-CAATATTATTTC------TCATACAGGGAAAAGAGTATGTGGATTTTCAGGTTTTTCCATCGAGTTCAATTAGTGAGTAATAGCCTAATTTCCTCTGGGTTCTAGTTTGAGATCTCCAGCCTGGAAGACTGAAA-AGTACTAGGCATTTGTATTAGAACACCCTCTGTCTGTCTGTCTTCCTATTTTTTTC i rn5.chr14 C 0 I 93876 a score=0.000000 s mm10.chr5_JH584296_random 146330 1282 + 199368 AAGACAGTGGTTGGGACCCTTAGTATTGCTCAACAGTTCTATATGGTGAGTTTCTCTCTAAAGAATCTACAATACACAAATACATTAACGTGCACATACACACACCAAACAAATGAATAAAAAAAATTGAGAATGAAAATTTCAAGGTAATTCCAAATATTTTCAGTATGTGAAATAAACTTTTGATTCATTGTTATTCTATACCTCCAAGTACTTGGCCTATAGCAATTCCTGATACCCTTAGTTTACCCATGGTGGAAAGAGAAAGACCAGTAACTAGACTTGAGCTATGGTGGTATTTAGTCACTGAGATGAAAGATGAAGTTTGAAAATTTCAAATTATTTTCACAATATGTGAGATGGAGCCCCAAGACATCATCCATGCCAAGCAAGCATAGAACCACTGAGGTACATCTCAGGTTGATTTTGATCAACTCATCCAGTTGTTCATTTCTGTAAGATGCTTTACTTCCAGAGGGTCTTACTTTGTAGCCTATCCTGGCTGATAATTTTGTCTACCTAAGAGGATTTGCAATCCCTCAGAAATATTTTTCTGGGGCCATTGATTCTTCAGATCATGTTTGGTCAAATTTACAAATCTCCTGCCTCATCTTCTCATACCAATAAACATCATTTAAAAACAACGCCTCAAATGTCTTTATATGAGGAAAGAAAAATATTTGGTGTCATCTTGGGCCATGTGCCTATCTTAGAGACAGCCTGTAGACATGGGATTGGTGCTTGCCCATTTGGTAAAGGTGTGGACACATGGAACCAGGTTAGTAGAGCACTCAGTGTCTGAGAGACCAGACAGTGACTTCATCCAGGGAATCAGTCTCTCTACTAGCTTCTTTGGGCTCTTTGTTGCTGTTGACACAGGCTGTCATGTATGAGCTGCCTCTGCAGTAAGACAGCTGTGTACTCCTGATACTCCTCCCTCTTCTTTCCATGTGAAGGCAAGAGGGCAATATATCAAGCCCAGTCTCCAGCAAGGTTTTCAATGGCCTTTGAATTTAGACCTCTCATTTCAATCAGTAACTTGCAGTATCAAAGGTGCGTTGTACTCTCCAATTTCTCCTTAAAAGAATGCAGTTCCATgtcaggcgtggtggcacatgcctttaatctcagcactcgggaggcagaggcaggcagatttctgagttcgaggccagtctggtctacaaagtaagttccaaaacagctagggctatgcagagaaaccctgtctcgaaaaacaaaaCAAAAACAAaaacaaacaaacaaacaatcaaacaaacaa e rn5.chr14 99219770 93876 - 115151701 I a score=11781.000000 s mm10.chr5_JH584296_random 147612 236 + 199368 aAAGAATGCAGTTCCACAGAAACTGATCTCACTGCTGG-TTTGGTGGTCCACAGTTCCAGTCTCAGGATTC-AGGGGTGGTAGCATCAGGG-TAAATATTCAAGCTAGCCTTAGCTTCATAATTGGCTGCAGGCTAGGTTAGTCTACGTCAGACTGACTCAAAAATAAAGAAATATGTATGGAAAGTAGATTAGGACATATCATTTCTAAGATATTGACCCAGAGCACCCAGGCTCtgt s rn5.chr14 15719973 235 + 115151701 AGAGAATAAAGTTCCACAGAAAGTTGTTTCACTGCTGGATGTGGTGGCTCACAGCTCCACAATCAGGATTCTGGGGGTGGTACCATCAGGGATTAGGATTCAGGCTAGGCTCAGCTCCATAGCTGACTGGAGGTTAGATTAATCTACATCAGACTGATTCAG----AAAGAAAAGTGTATGGAATGTTGATCTGTCTATATCATCTGTAAGCTAGTGACCCAGAACCCCCATGCTCTCT i rn5.chr14 n 93876 n 93876 a score=0.000000 s mm10.chr5_JH584296_random 147848 2119 + 199368 gtgggtggggaagcacccttacagaggcaggaggaggggtaatgggaaaggagggtcccaaaggggagacctggaaaggaaaaaaaaaaacttttgaaatgtgtcttagtcagggtttctattcctgcacaaacatcatgaccaagaagcaagatggggaggaaagggtttatttggcttacacttccatactgctgttcatcaccaaggaagccaggactggaactcaagcaggtcaggaagcaggagctgatgcagaggccatggagggatgttctttactggcttccttggtgatgaacagcagtatggaagtgtaagccaaataaaccctttcctcaccatctgcttcttggtcatgatgtttgtgcaggaatagaaaccctgactaagacaaattggtaccaggagtggggtattcctgtgacaacctgaccatgttttggggaggactgtggaaggactttggaactttgggcttgaagattcatccgttgttaaatctctgtcggatgttgtgtaggagcttggaagataatgttgagaacactgcagaagatggaggtctggtttgtgaaatttcagagggaaaattaaagactcttttcagggccattgctgttttgattgtgaagattctgtagttctggttagctggggctgaagaatcagctgtgattaacaagataccagaactaccaaagcaaaaactttgcattactgggactattgatgctggttagctggagctaagaaattagcggtgattaagaagagaccagcatcattgaggtgacatcttctgggaagtgttttctgaaagcacaaagaggctgtgttccagagatggccaaggttgtactcctgctgcagtgggtcttggtaatatgtaagtgtcacacaggtggtactggttttgaaggcatgaaggggtcacgcaaagcagctgaggtttggcactgtgagaggccatggaaggccattggtgaaggtgcagcctcagttgcaattgacggcccaggactgaaggggtcatgcagccttttggagatgccagtaccatgagatgaccaccaagagcagcagcagcagtggagtacaggcatctggagcctagaggactacgcgtgtgctacaaggggcatggctggagaagtgacccaagcccttggaggagcccagaagatcgtgagttggatcccagacattggacggttggagattgatttttgctttgattgtgactgtgccctgttattttccctcttgaaggaagaaactgttttagtggagcccacagttaagagacttttaattgtaaaaaaagagtttggattttaaaagagatggatattttaaagagattgaaaatttaggaatatgtaaagactgtgggacttttaaagttatttagatcttggggatgaataagaatgtaagggttgaggcttactagtgatgtgtttgtgtgtcaagttgacaagggatcaattgtactggctagttttgtgtcaacttgacacagctgtagttaccacagagaaaggagcttcagttgaggaaatgcctccatgagatacaactgtaaggcattttctcaattagtgatcaagggggaagggccccttgtaggtgggaccatctctgggctggctgtcttggattctataagagagcaagctgagcaagccagaggaggcaagctagtaaggaacatccctccatggcctctgcatcagctcctgcttcctgacctgcctgagttccagtcctgacttccttggtgatgaacagcagcatggaagtgtaagccaaataaaccttttcctccccaacttgcttcttggtcctgatgtttgtgcaggaatagaaaccctgactaagacaAaatgtaaacaaataaaatatccaagaataaaaaaagaaacaaaatgcatgatatgaagagtcaacaaaaccaagagctgactgagaaaaatcaataaaatggataaacccttagccaaactaactaaaggctatagagaaagaatccaaatgaacaaaataagaaatgaaaagggagacttagctacagaaactgaggacatccaaaaatcatcatcatatcttactacaa e rn5.chr14 15720208 93876 + 115151701 n a score=91.000000 s mm10.chr5_JH584296_random 149967 1 + 199368 a s tarSyr1.scaffold_31183 14050 1 - 20537 A i tarSyr1.scaffold_31183 N 0 I 12 e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 149968 12 + 199368 agaattgtactc e tarSyr1.scaffold_31183 14051 12 - 20537 I e rn5.chr14 15720208 93876 + 115151701 I a score=7018.000000 s mm10.chr5_JH584296_random 149980 283 + 199368 TTAAAGTAC-AGAAACATTGACAAGATCGAGGATGAAATTCCTTTTATGATATCTCTATGAAGAGAGAACACTAGAGACATTTGTCTCAGTCCCATCAGAAAAGCTTCAATCTTACACTAATACAATGTTTATATAAGCTACTCCCT-TAAAGAACCAAAGTAAATTGAACTGAAGAACAAGAGACTGTTCCCCATAAGTTAGGAATGGCATTATCAGAAATGCTGTGGACAGTTTTCCTATCAGCTACAAATGCTTCCATAGTTATTTATAATTAAAGTGAAAA s tarSyr1.scaffold_31183 14063 280 - 20537 CCAGAGTGCCAGGAGAATTGGTTGAACCCCACATGAATGTGGTTTAATAATGCTTCTGGAAAGATGGAACACTAGAGAC-TGAGTCTCAGTTC--TCAGAAAAATTCCCGCTCTGAGCCTGGACCAAACTTTGGAGAGACACTGTCTGTAAGGAATCAAATGGAATTGAACTGAAGACTAAAAGACTATTCCTCAAAAGCAACAAACTGCATTAATTCAAGTATTATGGACAAAACTCATACCTGCTGCAGATGTCTCCATATTTATT--TGGCTAAAGCTGGAA i tarSyr1.scaffold_31183 I 12 C 0 e rn5.chr14 15720208 93876 + 115151701 I a score=-1540.000000 s mm10.chr5_JH584296_random 150263 20 + 199368 TAGTTG--TTTGGAAGaaaaaa s dipOrd1.scaffold_36223 3547 10 - 13717 ATGT------------GTAAGA i dipOrd1.scaffold_36223 N 0 C 0 s tarSyr1.scaffold_31183 14343 22 - 20537 TGGTTAGCTATGGCAGAAGGAA i tarSyr1.scaffold_31183 C 0 N 0 e rn5.chr14 15720208 93876 + 115151701 I a score=723.000000 s mm10.chr5_JH584296_random 150283 25 + 199368 tataagtaaatatttttttttattt s dipOrd1.scaffold_36223 3557 25 - 13717 CAGAAGGAAATTCCTTTCTCTGGTT i dipOrd1.scaffold_36223 C 0 N 0 e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 150308 902 + 199368 tattattGACATTTAACaaacaaaaaaaaaagaaaaaagaaaaaaagaaaaaaataccttgtttgcttacacattgctgatctataacaagctgcttagttacaaatgtaattaggttcttgggaataataattttattcataatacttaaaatattggctcatgtgaaggtattcggaaacatattttctcttagtatactcattgtaaactttcatttaaaccatagactataagtacactgttatttttgtactgcttggaagatatagctgggatatataggctgtggtagaaaaagagtgttggagctttgctccacccatcaaatgtgtatgtatgtatatgtttaaagttgaaggttttgaagcttacttcatccaccgtgtgtgttcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtatgtgtgtgtgtatgtgtgtgtgtttgtgtgtgtgtTagagagagagagagagagagagagaaaatatatatgtaaattatgtgtgtgtgtgttaaagagagagagagagaaagagagagagagagagagagagagagagaaattatgtatgatccatcaacacttctggccagtcccactgagtattttgctggcaacagattgcttcttgccaaccccgtagaatcaacctttgctccttcagagaaaagtcagctgggtgatcagctaccaactctatgcacagcctcagtttgccctggatgtcaaagctggcctttgaAAAATGAAGATGTCAACATTTTACTTCAGGATTGCAAGCAACCTTTTCTTTCCTAGGCTCAATCCAAGAAGTATGTGCATCACTCATTTGGAAGTTTTCCAAAACAGAAGTCAGCAGTTATCACCTTC e rn5.chr14 15720208 93876 + 115151701 I a score=-236.000000 s mm10.chr5_JH584296_random 151210 14 + 199368 ACAGC-GGGATTTGG s choHof1.scaffold_143352 1007 15 - 4507 GGAGCTGAGGGCTGC i choHof1.scaffold_143352 N 0 I 72 e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151224 26 + 199368 TACAGCTTCCAGCTCAGGCTCTTCTA e choHof1.scaffold_143352 1022 72 - 4507 I e rn5.chr14 15720208 93876 + 115151701 I a score=-324.000000 s mm10.chr5_JH584296_random 151250 16 + 199368 CC---TACTTCTGGATCTT s tarSyr1.scaffold_43204 1204 19 + 14749 CTGGTTTCCTCCTACTCAT i tarSyr1.scaffold_43204 N 0 I 95 e choHof1.scaffold_143352 1022 72 - 4507 I e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151266 11 + 199368 GGTCTCTCCTG e choHof1.scaffold_143352 1022 72 - 4507 I e tarSyr1.scaffold_43204 1223 95 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=337.000000 s mm10.chr5_JH584296_random 151277 15 + 199368 AGCAGGAAGCACCAG s choHof1.scaffold_143352 1094 15 - 4507 ATAAGAATGCACAGG i choHof1.scaffold_143352 I 72 I 89 e tarSyr1.scaffold_43204 1223 95 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151292 70 + 199368 CAATTCCAGCCCATACATCCCAAACATCATGATGCTCATTCTGCATATCGGGTACTCAAAGTTTCCACCT e choHof1.scaffold_143352 1109 89 - 4507 I e tarSyr1.scaffold_43204 1223 95 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=351.000000 s mm10.chr5_JH584296_random 151362 5 + 199368 CCTAT s turTru2.JH480289 7638 5 - 106259 CCTGT i turTru2.JH480289 N 0 C 0 e choHof1.scaffold_143352 1109 89 - 4507 I e tarSyr1.scaffold_43204 1223 95 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=44.000000 s mm10.chr5_JH584296_random 151367 3 + 199368 GGG s tarSyr1.scaffold_43204 1318 3 + 14749 TTG i tarSyr1.scaffold_43204 I 95 I 110 s turTru2.JH480289 7643 3 - 106259 GGG i turTru2.JH480289 C 0 C 0 e choHof1.scaffold_143352 1109 89 - 4507 I e rn5.chr14 15720208 93876 + 115151701 I a score=68.000000 s mm10.chr5_JH584296_random 151370 3 + 199368 TAA s turTru2.JH480289 7646 3 - 106259 GAA i turTru2.JH480289 C 0 C 0 e choHof1.scaffold_143352 1109 89 - 4507 I e tarSyr1.scaffold_43204 1321 110 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=-130.000000 s mm10.chr5_JH584296_random 151373 7 + 199368 CAGGTGA s turTru2.JH480289 7649 7 - 106259 ACAGCAG i turTru2.JH480289 C 0 C 0 s choHof1.scaffold_143352 1198 7 - 4507 CAGGGGA i choHof1.scaffold_143352 I 89 I 90 e tarSyr1.scaffold_43204 1321 110 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=-1237.000000 s mm10.chr5_JH584296_random 151380 120 + 199368 AGTGTCAGTGGAA----AAGAG---------ATGACTTTCCATGGAGTCAGCTCTTCCTTTCTCCTATCTGGTCTAGGCAGTGTTGGTTTTTCTCCT-AGTGCTGAGTATCCACTAACAACCTAATGTTGTTAA s turTru2.JH480289 7656 109 - 106259 ATTGGCAGCGATGCCTTAAGAGCCACACATAATGAAA--CCACAGTCTCAGC-------------------ATTTAGGCAGCACTCATTTCCCACCTGAGCTTTTAATTCTCATCCGTGACATCAC----CTGC i turTru2.JH480289 C 0 C 0 e choHof1.scaffold_143352 1205 90 - 4507 I e tarSyr1.scaffold_43204 1321 110 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=1905.000000 s mm10.chr5_JH584296_random 151500 28 + 199368 TGACTTTTTCTGAGCTGCCTCCATAGCC s turTru2.JH480289 7765 25 - 106259 TGCCTTGCCCT---CTTCTTCCCTCTCC i turTru2.JH480289 C 0 C 0 s choHof1.scaffold_143352 1295 28 - 4507 TGCTTCTCTCTGGGATTCTTCCACATCC i choHof1.scaffold_143352 I 90 C 0 e tarSyr1.scaffold_43204 1321 110 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=1873.000000 s mm10.chr5_JH584296_random 151528 17 + 199368 CTGTGAGTTTACTCCAT s tarSyr1.scaffold_43204 1431 17 + 14749 CCCTGACTTTCCCCCAT i tarSyr1.scaffold_43204 I 110 I 49 s turTru2.JH480289 7790 17 - 106259 GTCTCACCTTCCTCCAT i turTru2.JH480289 C 0 C 0 s choHof1.scaffold_143352 1323 4 - 4507 -------------CCAT i choHof1.scaffold_143352 C 0 C 0 e rn5.chr14 15720208 93876 + 115151701 I a score=-1691.000000 s mm10.chr5_JH584296_random 151545 40 + 199368 TCTGTTACTCTTTAA-------CTGGT-----ACTACTACTACCTGTGG----------GAG s turTru2.JH480289 7807 62 - 106259 CTTGTTTCCCCTTCCATCCTTCCTGGTTCTCCACTTCTAGTACCTTAAGCATCACTAGAAAG i turTru2.JH480289 C 0 I 1 s choHof1.scaffold_143352 1327 28 - 4507 TTTGAAAACCTTTAA------------------------GTACCCCTGG----------GAG i choHof1.scaffold_143352 C 0 C 0 e tarSyr1.scaffold_43204 1448 49 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=-2468.000000 s mm10.chr5_JH584296_random 151585 7 + 199368 AGTCAAG- s tarSyr1.scaffold_43204 1497 7 + 14749 TTTCAAT- i tarSyr1.scaffold_43204 I 49 I 66 s turTru2.JH480289 7870 6 - 106259 TGTGGG-- i turTru2.JH480289 I 1 C 0 s choHof1.scaffold_143352 1355 4 - 4507 ----AAGG i choHof1.scaffold_143352 C 0 C 0 e rn5.chr14 15720208 93876 + 115151701 I a score=978.000000 s mm10.chr5_JH584296_random 151592 43 + 199368 ----GGAAGGCTCTTTCCC-TGTACCTACATCTTTACTATTAGTCCAC s turTru2.JH480289 7876 44 - 106259 ----GACATGTTCCTTCAGGTGCCCTTTCATCTTAGGTACTCCTACAT i turTru2.JH480289 C 0 C 0 s choHof1.scaffold_143352 1359 47 - 4507 AGAGTGCATGTTCCTTCTGTGACTCCTTCATTTTAATT-TGCTTCCAT i choHof1.scaffold_143352 C 0 C 0 e tarSyr1.scaffold_43204 1504 66 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=-2944.000000 s mm10.chr5_JH584296_random 151635 6 + 199368 -TCTACA s tarSyr1.scaffold_43204 1570 6 + 14749 -TCTTTC i tarSyr1.scaffold_43204 I 66 I 61 s turTru2.JH480289 7920 2 - 106259 ---TT-- i turTru2.JH480289 C 0 C 0 s choHof1.scaffold_143352 1406 3 - 4507 TTC---- i choHof1.scaffold_143352 C 0 C 0 e rn5.chr14 15720208 93876 + 115151701 I a score=2295.000000 s mm10.chr5_JH584296_random 151641 45 + 199368 CTGAACAGTATTTTCTCATCAGAGAACAACATCAG-TCAAGGCATC s turTru2.JH480289 7922 45 - 106259 CTGGAAGGCATTTCCCAAAGTGAACTCAGCAATGG-CCAAGGCCTC i turTru2.JH480289 C 0 C 0 s choHof1.scaffold_143352 1409 45 - 4507 -CAGAAGCCCTTTCCCTAAGTGAGGCTTGCGATGGATCCAGGCCTC i choHof1.scaffold_143352 C 0 I 15 e tarSyr1.scaffold_43204 1576 61 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=191.000000 s mm10.chr5_JH584296_random 151686 2 + 199368 TG s turTru2.JH480289 7967 2 - 106259 TG i turTru2.JH480289 C 0 I 102 e choHof1.scaffold_143352 1454 15 - 4507 I e tarSyr1.scaffold_43204 1576 61 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151688 13 + 199368 TAATCTTACTAGT e turTru2.JH480289 7969 102 - 106259 I e choHof1.scaffold_143352 1454 15 - 4507 I e tarSyr1.scaffold_43204 1576 61 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=46.000000 s mm10.chr5_JH584296_random 151701 4 + 199368 GAAA s choHof1.scaffold_143352 1469 4 - 4507 GGCA i choHof1.scaffold_143352 I 15 I 9 e turTru2.JH480289 7969 102 - 106259 I e tarSyr1.scaffold_43204 1576 61 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151705 2 + 199368 CT e turTru2.JH480289 7969 102 - 106259 I e choHof1.scaffold_143352 1473 9 - 4507 I e tarSyr1.scaffold_43204 1576 61 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=160.000000 s mm10.chr5_JH584296_random 151707 3 + 199368 TCC s tarSyr1.scaffold_43204 1637 3 + 14749 TCT i tarSyr1.scaffold_43204 I 61 I 5 e turTru2.JH480289 7969 102 - 106259 I e choHof1.scaffold_143352 1473 9 - 4507 I e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151710 4 + 199368 AATA e turTru2.JH480289 7969 102 - 106259 I e choHof1.scaffold_143352 1473 9 - 4507 I e tarSyr1.scaffold_43204 1640 5 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=91.000000 s mm10.chr5_JH584296_random 151714 1 + 199368 T s choHof1.scaffold_143352 1482 1 - 4507 T i choHof1.scaffold_143352 I 9 I 87 e turTru2.JH480289 7969 102 - 106259 I e tarSyr1.scaffold_43204 1640 5 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=91.000000 s mm10.chr5_JH584296_random 151715 1 + 199368 A s tarSyr1.scaffold_43204 1645 1 + 14749 A i tarSyr1.scaffold_43204 I 5 I 96 e turTru2.JH480289 7969 102 - 106259 I e choHof1.scaffold_143352 1483 87 - 4507 I e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151716 67 + 199368 CCTCTGTTCCCATCCTGCAAGATCCAGTGGATTACTTCCCCAAAAACCAGTGTCCCCCACTTGATAT e turTru2.JH480289 7969 102 - 106259 I e choHof1.scaffold_143352 1483 87 - 4507 I e tarSyr1.scaffold_43204 1646 96 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=459.000000 s mm10.chr5_JH584296_random 151783 7 + 199368 TACATGG s turTru2.JH480289 8071 7 - 106259 TACCTGG i turTru2.JH480289 I 102 C 0 e choHof1.scaffold_143352 1483 87 - 4507 I e tarSyr1.scaffold_43204 1646 96 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=91.000000 s mm10.chr5_JH584296_random 151790 6 + 199368 GCCATG s turTru2.JH480289 8078 6 - 106259 ATCAGA i turTru2.JH480289 C 0 C 0 s choHof1.scaffold_143352 1570 6 - 4507 ATCACC i choHof1.scaffold_143352 I 87 I 63 e tarSyr1.scaffold_43204 1646 96 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=451.000000 s mm10.chr5_JH584296_random 151796 6 + 199368 CTTACC s turTru2.JH480289 8084 6 - 106259 CTCACC i turTru2.JH480289 C 0 I 288 e choHof1.scaffold_143352 1576 63 - 4507 I e tarSyr1.scaffold_43204 1646 96 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151802 10 + 199368 TGAGTTGAAA e turTru2.JH480289 8090 288 - 106259 I e choHof1.scaffold_143352 1576 63 - 4507 I e tarSyr1.scaffold_43204 1646 96 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=-351.000000 s mm10.chr5_JH584296_random 151812 3 + 199368 TTC s tarSyr1.scaffold_43204 1742 3 + 14749 GAA i tarSyr1.scaffold_43204 I 96 I 11 e turTru2.JH480289 8090 288 - 106259 I e choHof1.scaffold_143352 1576 63 - 4507 I e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151815 11 + 199368 ATGTGTAAATA e turTru2.JH480289 8090 288 - 106259 I e choHof1.scaffold_143352 1576 63 - 4507 I e tarSyr1.scaffold_43204 1745 11 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=-128.000000 s mm10.chr5_JH584296_random 151826 3 + 199368 GGA s tarSyr1.scaffold_43204 1756 3 + 14749 GTC i tarSyr1.scaffold_43204 I 11 I 81 e turTru2.JH480289 8090 288 - 106259 I e choHof1.scaffold_143352 1576 63 - 4507 I e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151829 39 + 199368 CATATAATCCACCCAGCAAAGCCTGAAATATTGCCTTCT e turTru2.JH480289 8090 288 - 106259 I e choHof1.scaffold_143352 1576 63 - 4507 I e tarSyr1.scaffold_43204 1759 81 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=241.000000 s mm10.chr5_JH584296_random 151868 11 + 199368 GGAGCCTGTAT s choHof1.scaffold_143352 1639 11 - 4507 GAAGCCACCGT i choHof1.scaffold_143352 I 63 I 234 e turTru2.JH480289 8090 288 - 106259 I e tarSyr1.scaffold_43204 1759 81 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151879 30 + 199368 ATCAAGGCACCACAGGAAAGTAGATGGAAG e turTru2.JH480289 8090 288 - 106259 I e choHof1.scaffold_143352 1650 234 - 4507 I e tarSyr1.scaffold_43204 1759 81 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=851.000000 s mm10.chr5_JH584296_random 151909 18 + 199368 GCCATGCTGACACCATAG s tarSyr1.scaffold_43204 1840 18 + 14749 GCCAGGCCTGCACCATTG i tarSyr1.scaffold_43204 I 81 I 166 e turTru2.JH480289 8090 288 - 106259 I e choHof1.scaffold_143352 1650 234 - 4507 I e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 151927 157 + 199368 CCTTCACAACCTTAGTGAATCTATCAGTGAAAGCCTCCTCGAACAGTGCTGGGAGAAGATCAATGAGCAATTTCTCCAGAGACAACCAAGGTCTCATACTTCAGTGCCTTCTTCCTTATCAGCTCCAGGAATTGGGGTGGGCCATGAACTGCCATCC e turTru2.JH480289 8090 288 - 106259 I e choHof1.scaffold_143352 1650 234 - 4507 I e tarSyr1.scaffold_43204 1858 166 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=191.000000 s mm10.chr5_JH584296_random 152084 2 + 199368 TG s turTru2.JH480289 8378 2 - 106259 TG i turTru2.JH480289 I 288 C 0 e choHof1.scaffold_143352 1650 234 - 4507 I e tarSyr1.scaffold_43204 1858 166 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=273.000000 s mm10.chr5_JH584296_random 152086 1 + 199368 A s turTru2.JH480289 8380 1 - 106259 A i turTru2.JH480289 C 0 C 0 s choHof1.scaffold_143352 1884 1 - 4507 A i choHof1.scaffold_143352 I 234 I 29 e tarSyr1.scaffold_43204 1858 166 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=-31.000000 s mm10.chr5_JH584296_random 152087 1 + 199368 T s turTru2.JH480289 8381 1 - 106259 C i turTru2.JH480289 C 0 C 0 e choHof1.scaffold_143352 1885 29 - 4507 I e tarSyr1.scaffold_43204 1858 166 + 14749 I e rn5.chr14 15720208 93876 + 115151701 I a score=273.000000 s mm10.chr5_JH584296_random 152088 1 + 199368 T s tarSyr1.scaffold_43204 2024 1 + 14749 T i tarSyr1.scaffold_43204 I 166 N 0 s turTru2.JH480289 8382 1 - 106259 T i turTru2.JH480289 C 0 C 0 e choHof1.scaffold_143352 1885 29 - 4507 I e rn5.chr14 15720208 93876 + 115151701 I a score=-250.000000 s mm10.chr5_JH584296_random 152089 27 + 199368 -------------GGTTCTGGGAAAAATTCCAAGATAGAA s turTru2.JH480289 8383 34 - 106259 CTGCTCCAAAAGGAATCCTGTGGAAACTTGCAGG------ i turTru2.JH480289 C 0 C 0 e choHof1.scaffold_143352 1885 29 - 4507 I e rn5.chr14 15720208 93876 + 115151701 I a score=-31.000000 s mm10.chr5_JH584296_random 152116 1 + 199368 C s choHof1.scaffold_143352 1914 1 - 4507 T i choHof1.scaffold_143352 I 29 I 26 e turTru2.JH480289 8417 0 - 106259 C e rn5.chr14 15720208 93876 + 115151701 I a score=568.000000 s mm10.chr5_JH584296_random 152117 21 + 199368 AAACAAGTAAACTTTAACTCA s turTru2.JH480289 8417 19 - 106259 GAACAAGGCATCTTT--CTCA i turTru2.JH480289 C 0 C 0 e choHof1.scaffold_143352 1915 26 - 4507 I e rn5.chr14 15720208 93876 + 115151701 I a score=-928.000000 s mm10.chr5_JH584296_random 152138 3 + 199368 CAC- s turTru2.JH480289 8436 3 - 106259 GTC- i turTru2.JH480289 C 0 C 0 s choHof1.scaffold_143352 1941 2 - 4507 --CC i choHof1.scaffold_143352 I 26 N 0 e rn5.chr14 15720208 93876 + 115151701 I a score=462.000000 s mm10.chr5_JH584296_random 152141 9 + 199368 AAACACAAA s turTru2.JH480289 8439 9 - 106259 AAGCATGAA i turTru2.JH480289 C 0 N 0 e rn5.chr14 15720208 93876 + 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 152150 6271 + 199368 TCAGTGTCCAACAAGTATCACTAAAGGCTTACAATCTGATAAAGTTACTAAACATATTCTTTCAGTCTTCCTGTCTCTGGCCTCTAATCTCGGACCAGGGTAGTTGGGTGGGTGAAGTGCCAGAAGGTAAGTAGTTCCAGATCAGCCATGCAGTGGAGAACACCTAAATAAAGCCAAACATTTAAAAACAAAACCAAACAAACAAAAAGAGTGCTCCACACATTGAAGTATATGCCTTTCATTCCAGCCCTCAGGATGCAAAGATATGGAGATTTTGCTTTCTAGCCTGTTCCACATAATAAGTTACAGGCTACTTAGAACCATGAGTAAGAGTATTTAAATcacacatgcaaactcacacacaaccacacacccatacacatacaccacacaTTTtttgggattctattgctgtggtgaaaagtcatagccaaaggcaagctgagggtaaaagggtttatttggctcacccttctacactgtagtccatcatcaaagcaagcaaggacagaaaaacatgacaggaacctagaagcaagagctgatgcagaggaaatggaatggtgcaacttcttgccttgttctctgtagtttgctttcttttaggaccaccagaccaggaatagcaccaccataagtcagctggacatccccatcaagcactaagaaaattctccattgacctgctcaaagcccatacctatgaagccattttctgaacagttgttccttcctctcagattactctaacatgtgtcagttgacataaaactatccagcacaTCTTTcccctgtcagcttaacacataaacgctttttgagacataacccttcccttttgggtggcgggtgttgatcaccaagatctcgggttaataaatatcacaaatataaaacatgaataattaaaccttcacagcctttacaaattcaatcacatcgaaagtgcagtctctgaaaaaaaaatccagtctcctccaaGTCACCTGCCTGCCAGATCCACCTGCGGCACCTAGATGTACCCTGTCCACTGAGCTCCATTTTCCAGTCCATCGCTCTGCCTGCATTTCTGCAGGTCTCTCAGCATCTAGAATGTTCTAGTCAGTCTCTGCCCAAGGTCTCTTGCCTGCCAGGTTTCCTTAGGCCACACACAGCAGAGCAAATTTCACCTTGTACCCTGCACTCCACCTGCTTGCTCACAAATCTGCCCTGCTTTTCAGGAGGCTTGCTGGCAccagagacaacccaagagctaaaggtcagcataagaacacaatcaacaacagccaaggcaatatggcaactccaaatcccagatattctactacagtaagctctggataacgtaatgtagctgaagcagaacaaaatgatcttatactcaattttttgaagatgatagacacctttaaagagaaaatgaataaatccgttaaccaaacacaagaaatataatcaaacaggtgaaggaaacacataaaacagttcaagacatgaaaatagaagagaaaccactgaagaaaatacaaacagaggcaatcttagggattacaaacctaggtaagagaagagacaccacatacacaagcatctttaacataatacaagacatagaaaagaaaatttcaggtgtcaaagataaaatagaagtatttgatacatcagtcaaagaaaatgttaaatcgaaggaggttctgatgcacaacatccaggaaatttggaacactataaaaagaccaaacctaagaacaatagaaatagaagaagaagattcttagctccaaagatacagaaaataatttcaacaaaataataaaagaaaaatttcctaacctaatggtagagttgcttataaacatacaaaaagcttaaacaacaccaaatagattggaccaaaaaaatcctcctgccacataataattaagacactaaatgtaacaaacaaaaattatatcaaaagctgcaaggggaaaaggccaagtaatatataaagggatacttattagaattacacccaacttctcaaaagagagtttaaaatccagaaggtcctggtgcagactctaagggaccacagatagatggcccagactactatacccaggtaaaactttacatcactatatatggagaaaacaagattgtccatgacaaaacaaatttaaaccatgtccatcaccaaatacagccccataggagatactagaaggaaaactccactcaagtaagttaactccacacaacaaatgaaataatcccatactagcaaacccaaactggaaacacacacacacacacacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacgcacgcacacagactcataaccaacatcaaaacaggaatcatcacttattgctcatcaatatctctcaacatcaatgggctcaattttccagtccaaagacacagactaacagaatggatgtgaaaacaagaccctgaatttgcttcataaaagaaacagaattcaacaacaaagatagacattaccttaaagtaaagggcaggaaaaagattttctaagcaaaaagaccaagaagcaagtcagtgtagccatcataatatattttgactttcaatgtacattatggaaggacacttcatattcaaaaaatataaaaatccactataagaatgtctcaattatgaatagttccacaaatgccagggaacacatatttgtaaaagattactaatgcttaaatcacacttccaatatcatacattggtagtgggagacttcaacaccttgctttaaccaaaagacagattatcgaggcagaacctaagcaaaaaaatcagaaataatgaaacaagcagaagttatgaatcaaagggacttaacagatacctttagaacatttcacccaaacaagaaagaatataccttctcagcaccccatggaaccttctccaaaagtggccatgtagttgcttaccaagaaaaccttaagagatacatgaaaactgaaataattacctgtatcttaacagaccaaaatggatcaaactggatttcaacagcagtataaacaacagaaagccaacaaattcctggaaactaacaaccctctactcaatgattactcaatgggtcagagaagaaatatattaaagacattgtaaaattcaatgaagatgaaggcagaacataccgaaacctaaaggatacaatgaaagcagtgttaagaggcaaattcatagcactaagtTCcaattgagtactactcagctattaacaaaatggatttatgaaattcttggacaaatggaattatctggaggatatcatccttagtgagataacccaatcacaaaagaagtcattagatatgcactcacttataaatggatattagcctagaaacatagaacagccaagattcaatttgcaaaacacaagaaaatcaagaagaatgaagaacaatttgtggataattcattcctccttagaatagggaacaaaatatccatgaaaggagtaacagagataaagtttggagctaagatgaaagaatggactatccagagactaccccgcctggggatccatcccatagtcagccaccaagcccagacactattgcatatgtcagaaagattttgctgaagggaccctgttatagctgtctcatatgagtgcctggcaaatacagaagtggatgctcacattcatctataatatcaaacacagggtccccaatggagaagctagagaaagcatccaagaagctgaaggggtctgcaaccctataggtgggaacaacaatatgaactaaccagtacccccagagctcatacctctagctgcatatgtagcagaagatagcctagtcggccatcactgggaagagaggccccttggtattgcaaactttatataccccagtacagggaaatgccagggccaagaagcaggagtgggtgggtaggggagcagggtggggggaactttcggggtagcatttcaaatgtatataaagaaaatatctaatttaaaaataagatacaatttgcaaaacacatgaaactgaagaagaacgaagaccaaaatgtggacactttgccccttcttagaaatggaaacaatcacccatggaaggagttacagagacaaagtttggagctgagacaaaaggatagaccatctagagactgcaatatccagggatccatcccataattagcctccaaacggtgacaccatcgcatacactagtaagcatttgctgcaaggaccctgatatagctgtctcttgtgagactaggctggggcctagcaaacacataagtggatgctcacagtcagctattggatggagcacagggcccccaatggaggagctagagaaagtatccaaggagctaaagagatctgcaaccctgtaggtgcaacaacattatgaactaaccagtacccaggagctcttgactctagctgcatgtgtatcaaaggatggcctagtgggccatcactggaaagagccccattggacatgcaaactttatatgctccagtacaggggaatgccagggccaaaaaatgggaatgggtgggtagggaagttggagggagggtatgggggacttttgggatagtattggaaatgtaattgaggaaaatacgtaataaaaaaatattaaaaaaaaAAAAGAAAAAGAAAAAAAAAGAATTAGCAAggtacttgctgctgggttaaacttttgttggtctgctcccgagtagactccatatcctggtccatcctagagcaaccactgcattcagagtcttggagctgctgctgggagcctggtagacttggaacccatcaaccaccccccacccccatccccgaatactgctctcctttcttccatccattccaccccttctacctgatccttcctgctgtggcagacttctagttggtctgctctgtgaagactccatatcccaatctatcctagaggacctgctgcactcagagcagttgttctaccagtatctgacaaatacagatgtggatactcacagtctaccattggctgagcacaggatccccaatgaatgacctacagaaaggacccaaggagctgacaggttttgcagcaccataggaggaacaacattatgaactaaccattatccccagagttcccaggaactaaaccaccaactaaagactacacatcatgggactcatggctcctatgctcatagattgatagaattaacatagtaaaaatggccattctgccaaaggcaatctatagattcaatgtaatccccatcaaaatcccaacacaattcttcaaagacatagaaagagcaattctcaaatttgtctggaaaggaaaaaatcccagaatagtgaaaacaattcttaacagtagaagagcagctgggggaatcaccatccctgacatgaagctttactacaaagcaatggtgataaaaactgcacagtattggtagagagacagacatgttgaacaatagaatagaattgaagacccagaaataaaagctcacacttatggtcatttggtctttgacaaaaacaccaaaaatatacaatggaataaagaaagcatcttcaataaatgatgctggtctaactggctgtttgtttgtagaagaatgaaaatagacccacatttgtcaccttgaacaaagctcaagtccaagtggattaaggatctcaacataaatcaagacacactgaatctagtagaagagaaagtgaaaaagagtcttcaaGGATAGCTAAAAGCAGTCCATgtgggggaatctcagggacaagcagagacctggggtgggtcaagctcctgggaggatatgggagttaccctgggtgagactcaaggagctaggaataaggagactgaaatggccacttcctgtagccaggcaggatttccagtggaaggagggggacaacaacctacccacaaaaccttccatccaaaaatgtccctgcctacaagatatacagggataaagatggagctgagattgaaggaataaccaaccaatgagtgcacaaacttgagacctacctcatagaggagagccaaaccctgacactcttgatgatacttggttgcacttcaggacagaagcctagcataaacatcatgtgaggattcatacagcaagtgatggcaacagatggacatgcacagccaaatattaggcagaattcagggaatcttttgatatagtcagaggaagga e rn5.chr14 15720208 93876 + 115151701 I a score=131458.000000 s mm10.chr5_JH584296_random 158421 2785 + 199368 ttgagggagccagatg--ggtcaagtataccagaaggagacctagagagccaagtcacctggaccctttgggcattcatagagattgagccaccaaccaaaaagcatgcatggtccagacctagggcccctacaaatgtggagcagatgtgaagcttggtcttaatgtgtgtcacctaacaagtagatggggggttgtctcttattgaactttgctgccttctattggaatctatgggaacctagtggggctgccttgtttggccacagtaggagaggatgtatttgttcctgatgcaacttggtttgccagggtggtgtggtagctgatggggttgcatagtgaatacctttccttctcttgggagaatgggaggaggaaatgatgagaaagggtcgaagggtaggcctaggaggaaagggaaggcaggatgtgatcaaatggtaaagtgcataa---atgaatgaGTGAAAATAAACAGAAATGATAAATAGGGAGCTAGACATGTTTAACAT---TTAAACTTTGTCAACTGCAAACTGAATAGAAATGTGTTCTCCCTGAAATATGTTAGCAACCTATGTATTCATGAGCTACTTATAATTAAACTAAATAATGATTAAATATGCAAAAGTTTTGGTATATGATAAAGTTGTGAGGATTGGTGTGAAGCTTGGTTGCTATAGTTAGTATGTACTTATAACTGATAATTAGCATATGCAAATTATACACACACAATGTTGT-TCAGTCAGACATCATCCTACAGATATAAATAGGTAGGGTTATATTTATTTTAGTTCCTTATCTCCCCCCTCTGCACATTGTTTCTTTCTCCTCTCTTATCAGTATATGCTTAAAGTTTATACTATAAAAATTGTTCAGGTTTTTTATTCTTTTGAATTTTATTTACTTATTTGTCACAGCTTTTATTCCATTCCT-GAGCAGGGATAAGATGAAGTCAAGAGAGACCGGAAGGAAAGTGCTAAGGGATTCTAGCTCCATGTCAGGAGGAAGTTTTGTGGATTTTGATATTAGTTATT-----TAGATAAGTAGATAGAATGACATAGAATTTCTCCTCTGCAGTCTCAACCTACAGGGTGTGGAGATAACTCTTATGTATTATTACATCCTG-TTAATGGGGTTCACAGATCCAGTGAATGGATAGAAAAACACTTTACAAAGTAAAACACATCCAGAGATTTCTTGGATTGACTTAGGACATTGGTATTACTTTGATATATCTACACAGTGATTATCTA-AaaacaaacaaacaaacaaacaaacaCACCATCAACATGCACAAGGTCACCAAATATTTGAAATGTAATTAATTAAATATAATGCCAAACTGGTAAGCTTTCCTGCAACATAGATACCTGCTTCCTTGTGAATCTGTATCTGTGAGTGCTTTTTTTCCCTTTTCAAACATAggcctggagagatgatggctcagtaagtaagagtcttggttggttgctctttcagacaacctgagttcaattctagacaattacctggtagctgataaccatctatacagggttctgatgcctttttctgtcatgccAGCTTACATAGTAATAGAACAGGAATAAACATAAAATGCATACAGAAATAAATGTTGTACATTGACAAATTCCTAATTTCCTCTA-CTCATCCATAGTTTAGGAGCTCAAACTCTGGAGCCCAAAGCACCCTACCCTATTGCTCTCCAGCTGAGCTCAATGGACACACCTGTAAGTTCACATGCTCTCTTCACAGAGCCACACAACTGTTGATGATCACCATCCAAGTTTTAATTAATTGGGCCATTTTCTTTATTACTTTGTGAAACTGAGTCCTTTTTTCTTTAAGAACTTCTTTGACTAGGTGTATAGCTACATGTAtattatgtgggtttgtgtatgtgaaagggggcattcacagaggccagaaaagagggtcctatcacctgaagcctgagttccattggacagacacctgattattagctctgaaacagaactttgctcctctgcaaaagcagcgtgtgctctccaccaatgaagagtctctctccaTCTATGCCTTGTTTATTTTAAGAATACAAATGCACGTTAAATGTGGGGAAATCTCAGGTGAGTCC-------TAAGGAACAAGGTCAGGGAACTG----TTGAGATAGGAAGACAGGTTGCAAGGGAAGACAGAAAGAAGGAGTGTAAGAGAGATTTG--------------------------------TTGTTTGGTCTTT--CTTCTTCTTTACCTTAGGCCAGCCTAAATGTCCATATGGGTCCCACCTTAGCTGATAACTTTATCCATCTTCCAAAGAT-------TGTGAAAGGCCTGGCATCAATGTGTACATTTTAACTTCACTCCAGAGGGCATTTGTAGCAGAGTCCTTAAATTTAGATACTTTATTCAATTCAGACAGTAACAATGATGTGT-AAATGAAGAACTCATATTCTAAGTGTTCAATAAATGCAG-AGTAACAAATTATTTTATTGATGGTTTACTATACAGAAAAGGGGTATAATGACTTGGCAGAGGGAGTCTTTTTTCTTTTGTTCTTTTTTTTATTACAACTGAAGAATTAAAGTACATTTGTTTTGTAAAGTACATGCTTTATGTAGTGGAGAGACCTGCATATTATGGGATACCTTTATATAAAATATTGGTGTGTCATAGAGTTTTGGAGTCCACTGGAATAAGGCTTTAGAGACATGTGGCATAATGGATGGATAAAGAGGTTCCAGTAGTCACTTCATTAAAGCATGATAAAAAGATCAAGATTACAAAGCCAGACTGGAAATCCTGTTTACTTTGCCCTAT s rn5.chr14 99313646 2773 - 115151701 ttgaaggagccagatgagggtcaagtatactagaaggagacatcaagagccaagttacctgtacacattatgggttcacagagtctaactgccaaatcaatgagcttgtagggtctagaactaggcctcctaaacatatagaacagttgtgaagcttggtgttaatgtgagtctcctaataattagactgggggttgtctcttcttgaacttcattaacctcctttttaacctgtgc--acttaactggactgtcttgtctggcctc-gtgagatagaactcatttagtcctgaggcaagttggtgtgcaagggcagcatggttcctggtgagttgg--taactgagagcctcagttactgagggagaatgggagcaggaaagaaggggaagtggtgggagcgtaggacttggaggaaagaaaaggtagtatgtgatttggtggtaaaataaaaaatTCATGTGTTAATGAAAACAAA-ATAAGTGATAAACAGGGACCTAGATATTGTTAACATCATTTAAACATTGTCCACTGCAAACTGAATAGGCATGTGTTGTCCCTGAAACATGTTAGCAACCT--GTTTTTATAGGCCAATTATAATTCCATTAAA--ACCATTAAATATGCAAAAATTT-GCTATAAGATAAAGATCTGAGGACAGTTGTGAACTTTGGTGGCTATAGTTGGTAGGTACTTATAACTGATAATTAACATTTGTAAACTATACA------ATGTTGTCTCACTCAGATATTTCCTTACAGATATAAACAGTTAAGTTTATATTCATTTTAGTTTATG--TTTCTCCCTAGCTACATTTTGTCTTTCTTCTCTCTTATATATAATTGTTTAACGTTAATACTGTAAATAATTTTCAGGTTTTT-ATTCTTTT-------ATGTACTTATTTTTCATAGCTTTTATTTTATTTTTTGAGCAGGGATAAGATGAGGTAAAGAGAAACCAGAAGGAAAGTCCTGAGAGACTCTAGTTCCATATCA------AGTTTTTGGAATTTTCACAGTAGGTATTCATATTAGGTAAGGAGATAAAATGACATCGAATTTCTTCTCTGAAGTGCCAACCTGTAGGGTGTTGAGATAACTGTTATGTAT------ACCCTGATTAATGTGGTTTACATGTGGAGTGAATGGATACATAAACACTCTATGAAGTGAAGTACATCCATTCCTTTCTTGGAATGACTTGCAACATTGGTATTGCTCTGGCAGATCTACATAATAACTTTCTACAAAACAAACAAAAAATCAAGCAATCAAAACT----CACACACATGTACACAAAACATTTGAAATGTAACAGATTAAAGACAGCCCCAGACTGGTAAGGTTTTATGCAAAATAGGCACCTGATTCCTTGTGATTCAGTTTTCATGAGTGCTTTTT---ACTTGTGAAACAAGAGCCTAggg-gatgatagtgcaataattaatagtcctggtgg----ccttttcagataacctgagttcaattctagacaaacacctggcagctcacaaacatctatacagggttctgatgcctttttctgtcatgcaagcacacaggcaaacagaacacaaatatacataaaatGCAAACAGAAATGAATGTTGTACTTTGACAACCTCCTCATTTCCTCTCTCTCACCCATGGTACAGGAGCTCAAACCCTGGAGCTCAGAGCAAATGAGGCTATTTCCCATCAGCTGAACTCAATGGATACACCTGAAACTCCATATGTGCTCTTAACAGAGCCACACAAC--------ATAACCAT-----TTTTAATTAATTGGGCTATATT--TTATTTCTTTGTGATATTGAGTCCATTTTTATTTAAAGACTTCTTCAGTTAGGtgtatatatgcatgcatattacgtggatttgtgcctatgagagctgggatccacacaggccagaaaagtgg---------cctgaggcctgatttccatttgagaaccatgtgattataagctctgagacccaaatt--gttctctgcaaaagcagcatgtgctcttaaccagtgagcaatctctccCAAACTATAGGTAGTTTGTTTTAAGAATAtgaaagcatgtttattgtgggcaaatctcaggtgagttcactgttctgaggaaccaggtcagggaactgaacatggagacagagagacaggttgtgaggaaagacagaaagaaggagcctgagagaggTTTGATGTCTTTGGAGGttgtgttttgtttgtttgtttgtttgttttttgtCTCCCTCTCTTTCTTAGGTCAGTGTAGATGTCCATATGTGTGCCACCTTAGGTATTAACATTATCCACCTTCCCAAGATAGTGAATTGTGACATTTCTGACATCAATGTGCTTATTTTGACTGCTTTCCATAGAGCATTTGTTGCAGAGTCCTTAAATCTGGATAGTTTATTCAATTCAGACAATAACAATGATATTTCAAGCGAAGAACCCATGCTCTATGTATACAATAAATATTGTAACAATAAATTATTTTGTTGGTAGTTTACTATGTTGAAAGTGGGTATATGGACTAGGATGAGAAAGATTTTTTTTTCTGTTCTATTTTCTGATT----CTGATGACTAAAACTAAATTTCTTTT-TAAGGTAAATGCTTTATGTAGTAGAGGGAACCTCATATCATTTGGCAACTTCTTGTTCACTATGGGTACTTCATAGAGTTTTGGAGACCATAGAGATCAGGCTCTAGAGACATATGGAAGAATGGCCAGATATAGAGGTTCT--CAGTAATCTCATGTAGGCATGACAAAAATATCAAGAGTTCAAAGCCAGACTGGAAAGCCTGTTTACTTTGCCCTGG i rn5.chr14 I 93876 I 7469 a score=9745.000000 s mm10.chr5_JH584296_random 161206 243 + 199368 GTTGTCTTCTTTCCTTTAGGCATCTCGGTTGAGTCCAAGGTGCCTTGAAATCTGAATGTACTAGATATTAAT----TGTGATCCTTTTAATCTTCCTTCATAGGAGGTGTGACTATGTAGCTCAAATTGTTTAAATATTTTGTGCACATAACTGATCAGCCACCCAGGAGGGTTGTACATGTAACCCAGGCAAAGTACAAGGGAAATAAGTGTCAAGAAAAGTTTCATTTTATACATTTCCAATTTC s rn5.chr14 99323888 236 - 115151701 GTTGCCTTCTTCCTTATAGGTATCTCTGATATTTCCAAACTGCCATGTGGTTTGAATATACTGGATGTTACTAGTCTGTGATGCATTTAATCCTCCTTCTTAGGTTGTGTATCTATATTTCTCA----CTTTAAATGTTGTGTGCATACAA-TGATCAGTCACC-AAGAGGATTGTAATTGTAGCTCAGGCAATAAACAAGGAAAATATTTGTCAACAACATTTTTATTTTGTGT-----CAATTTC i rn5.chr14 I 7469 I 19 a score=0.000000 s mm10.chr5_JH584296_random 161449 1872 + 199368 TTTTTTTTTGTGTGTGTGTTCTTTCCACAACAATACTCTtttttttttaaaattaggtattttcctcgtttacattttcaatgctatcccaaaggtcccccatacccaccccccaatcccctacccacccattccccctttttggccctggcattcccttgtactggggcatataaagtttgcaagtccaatggacctctctttgcagtgatggccgactaggccatcttttgatacatatgcagctaaagacaagagctcccgagtactggttagttcatattgttgttccaactatagggttgcagttccctttagctccttgggtaatttctctagctcctccattggaggccgtgtcacccatccaatagctgactgtgatcatccactactgtgtttgctaggccccggcatagtctcacaagagagctatatctgggtcctttcagcaaaatcttgctagtgtatgcaatggtgtcagcatttggaagctgattatgggatggatccctgcataaggcaatcactagatggtccatcctttcctcacagctccaaattttgtctctgtaactccttccatgggtgttttgttcccatttctaagaaagggtaaagggtccacattttggtcttcgttcttcttgaatttcatgtgtttggcaagttgtatcttatatcttgggtatcctaagtttctgggctaatatccacttatcagtgagtacatattgtgcgagttcctttgtgattgggttacttcactcaggatgataccgtccaggtccatccatttgcctaggaatttcataaattcattttttaatagctgagtagtattccattgtgtaaatgtaccacattttctgtatccattcatctgttgaggggcatctgggttctttccagcttctggctattataaacaaggctgctatgaacatagtggagcatgtgttcttcttaccagttgggacattttctggatatatgtccaggagaggtattgtgggattctcctgtagtactatgtccaattttctgaggaatggtcagactgatttccagagtagatgtacaagcttgcaatcccaccaaaaatagaggagtattcccctttctccacatcctcgccagcatctgctgtcacctgagtttttgatcttagccattctgactggagtgaagtggaatctcagtgttgttttgatctgtatttccctgatgattaaggatgttgaacattttttcaggtgcttctctgccattcgatattcctcaggtgagaattctttgttcagctctgagccccatttttcatggggttatttgaccttctggagttctttatatatattggatattagtcccctatccgatttgggataggtaaagatcctttcccaatctgttggtggcctttttgtcttattgatgttgtcttttgatttgcagaagctttgcaattttatgaggtcccatttatcgattcttgatcttacagcacaagccattgttgttctattcaggaatttttcccctgtacccatatcttcgaggcttttccctactttctcctctataagtttcagtgtgtccggttttatgtggagttccttaatccacttagatttgaccttagtacaaggagatagaaacggatcaatttgcattcttctacatgataactgccagttgtgccagtaccatttgttgaaaaggctgtcttttttccactggatggttttagctcccttgacaaagatcaagtgaccataggtgtgtggattcatctctgggtcttcaattctgttccattggtctacttgtctgtcactacatttccaatttcaaacagactttttCTTC e rn5.chr14 99324124 19 - 115151701 I a score=17199.000000 s mm10.chr5_JH584296_random 163321 393 + 199368 CCATGAAATACCAGTGT-TTTCCATTCCTGGGCCCATCTAACCTTTCTGACTCTGAACCAGATAGTGAGGTTGGTAACAGTCAAAGACCACACAGAGAGAACATCCAGGTTTATAAGTATAGAACTAAGCATCTAGTTAGTTTGTCTGGGGAGAAGCCAGGTATCAATGCCAAACTGTGTTTCTGACTCCAATTGGCCCCTGTTCCCTCCACCCTTCCAACTGTTCCTCCATGTCAAGCTCAGTCTCCAAGACACCAGTCACTGTACATCCTTATGTTTCCAACCATCTGAGCAGTATCAGAAACCATGGGCTCCTAGGTCCCCAGATGAAAGATGTATATCAAGCCTATTGTTTATTCAAATCCAGAACTCATATTTCCCAATTTGCTGCCAA s rn5.chr14 99324143 371 - 115151701 TCATAAAATACCAGTATCTTTCTATTCCTGGACCTATTGAAACTTCCTGACTCAGAACCTGGTAGTGAAGTTG-TAACAATTAAAGACCCCAGAGAGAGAACATCCAGGTTTATCAGTATACAGCAAAGCATTTATTTACTATGTCCAG--------------------CCAAACTCTGATACTGACTCCAAAAGGACCCTGGTCCCACAATAGATACCACTGTTCC-CCATGACACGTTTGCCCTGCAAGATCCCAGTCTCTGTACATAATT-TTTCCCCAAACATCTGAGCAGTGTCAAAAGCCACAATCTCGAAGAACCCCACATGAGAGATGTTTCCCAATCCTGTTGTTTATTCCAATCCAGAAGTAGTATTTCCCAAATTAATGCCAG i rn5.chr14 I 19 C 0 a score=13065.000000 s mm10.chr5_JH584296_random 163714 216 + 199368 CAACAACAACAACGTCTGAACACCTGGTGTTAGACACAGCACTCACCACATGTATGGCATATATCTGTAACAAATGAACTCTTCTTGGGCTGCCTTTTTGCCCTGAGTGTATCTATGGGCT--------------------------CCTGAGCCA----ATACA-------TCATAGCACTCCAGAGGGGCAGTGTATTGTTTCACATTCATCTTGGTCCAGTTGGCTGT-TGATGCGAAAGGTCCTTCAGGA s rn5.chr14 99324514 244 - 115151701 CACCTGCAAA---GTCTGGTCACCTGGGTATAGACACAGTGCTTGGCACATCTTTGGCACATTTTTGAAGCAAAGGCGATGTTCTTGGGCTGCCTTATTGCCCTGAGTGTAGCCATGAGCTGAGAACAAAGTTGTGAAAATCTTTCTCTGGAGACATGGGACAAC-------TCATAGCACTCCAGAGGAGCAGGGTATTGTTCCACAACGATCTTGTTCCAGTTGTCTGTGTGCTGCAAAAGGGCCATTAGGA i rn5.chr14 C 0 C 0 s papHam1.scaffold30449 1847 250 + 21515 CAACAGCAGCACTGATCTAACTCCAGGTCATAAAATGACCTGTTGCCACAGCGAGGGCAGTAGTCAGTACAGAACAAGATCCTCTTGGGCTCCCTTAAATCCCTCACTCTCCCCATCAGCTCAGCCCCAAGTTGGGCAAATCTGCTCCGGCAGAGA----GTACCACCAGCATCATAACTCTCCCGCGGGGCAGGATACAGCTCCAGGCATAAGTTGTCCAATCTGATAGTGTGGCACAGCAGGTTCTCCAGGG i papHam1.scaffold30449 N 0 C 0 a score=177.000000 s mm10.chr5_JH584296_random 163930 4 + 199368 TGGG s rn5.chr14 99324758 4 - 115151701 TGTG i rn5.chr14 C 0 C 0 e papHam1.scaffold30449 2097 0 + 21515 C a score=0.000000 s mm10.chr5_JH584296_random 163934 396 + 199368 tgtactggctagttttgtgtcaacttgacacagctggagttatcacagagaaaggagctacagttgaggaaatgcctccatgagatccaactgtaaggcattttctcaattagtgatcaagggggaaaggccccttgtgggtgggaccatctcagggctggtagtcttggttctataagaaagcaggctgagcaagccaggtgaggcaagccagtaaagaacatccctccatggcctctgcatcagctcctgctccctgacctgtttgagttccagtcctgacttcctttggtgatgaacagcagcatggaagtgtaagccgaataaaccctttcctccccaacttgtttcttggtcatgatgtttgtgcaggaatagaaaccctgactaagacaA e papHam1.scaffold30449 2097 0 + 21515 C e rn5.chr14 99324762 0 - 115151701 C a score=166.000000 s mm10.chr5_JH584296_random 164330 4 + 199368 TGGG s papHam1.scaffold30449 2097 4 + 21515 TGGC i papHam1.scaffold30449 C 0 C 0 e rn5.chr14 99324762 0 - 115151701 C a score=30861.000000 s mm10.chr5_JH584296_random 164334 395 + 199368 CATGGAGAAATCACTGTTGTAGAAGTTGACATTGGAGATCTGAGTGCATTGTTTGAATCCAGGTAGGAGGGCATTGACCTGGGAGTCATTCACCCTACATCCTTGCAAATCCAGAGTCTCAAGAGTGCTTACCACTTTCATGAGGAGACACCTCAGAGCCATAAGATCAAAATCCAGTAAAACCACACCTCTCAATCCCAGATGTTTTAGCTGAAAGAGGATCTGACAGCAGGAGAAGGAATCCAGGTCTCTCTGTGAAATTAGGGAGTAACTAATGGAGAGGGTCTTCAAGGGTGTCACAAGGAACCTAGGGTTAAAGGAGACAGAGAGTTAGTTCAGTCAAAT-----GGTCTTGTAGAGGTTTGGCAGGGATATACTGA---GTAGAAAGAACCAGGTGC s rn5.chr14 99324762 390 - 115151701 CATGGAGAAGTCATTTTTGTAGAGGTTGATCTTGGTGAGCTGAGAGCATTGTCTAAGGGCAGGAAGGAGGGCATTGAGTTGTGAGTCAATCATTCTACACCCCTCTAATTGCAGAATCTCTAGCGTGTCTTCCACTTTATGTAGCAGAGCTCTCAGAGGCATAAGATCCAGTGAATACAAGACTGTTCCTCTCAGATCCAGATGTTTTAACTGAAAGAGGCTCTCACAGCAGGACAAGGAATTCAAGTCTCTCTGTGAAGTTATGTAATTAGTGATGGAGAGGGTCTCCAAGCGTGTCATCAGGAACCTAGGGTTAGA----ACAGGGGGTTAGTTATGGATAAT-----TGTGTAGTAGAAGTTTGGCTGGAATGTACATAGTGGTAGTAGGAACCAG---- i rn5.chr14 C 0 C 0 s papHam1.scaffold30449 2101 393 + 21515 CATGGAGACGGGATTTCCACGGAAATTGAAGGTGGTGAGCTCAAAGCAGCGGCTCAGGGCAGGCAGGATGGTGTTGACTTGGGAGTCTACGATGCCACAGTCATCTAAGTCCAGGTACTCAAGGGTGCCTGCAACTTTTTCTAGCAGAACTTGGAGAGGCACAAGGCTGAAATTGGCCAGTCTGATGCCAGTCAGGTCCAGGGTCTTTAGTTGACCGATGCTCGGGCACTTGGACAGATGCCTCAAGTCTGATTCCAAAAGCACACAGTTAGTTATTGCGAGGATCTTTAACGAGGTCTTCAGACAGCTGGGGAGAG-----ACAGCAAG-AAGTTCTGGGGAATCACAGGGGTGAGTGGACGGTGGTGGGGAATGTCAAGGTGAAGGGCAAAGACCAT---- i papHam1.scaffold30449 C 0 I 11 a score=728.000000 s mm10.chr5_JH584296_random 164729 11 + 199368 GTGCCCCAAGT s rn5.chr14 99325152 11 - 115151701 GTACCCCAAGG i rn5.chr14 C 0 C 0 e papHam1.scaffold30449 2494 11 + 21515 I a score=902.000000 s mm10.chr5_JH584296_random 164740 4 + 199368 TCAG s rn5.chr14 99325163 4 - 115151701 TCAG i rn5.chr14 C 0 C 0 s papHam1.scaffold30449 2505 4 + 21515 CCAG i papHam1.scaffold30449 I 11 I 1546 a score=28039.000000 s mm10.chr5_JH584296_random 164744 632 + 199368 TTTGACTAAATGATCAAGGACATCATTTATGATACTTTCTATTGGAACCTGTTCAGTCCATTCAACC--CCACAATTCATCTCCTGTCCTCACTCTCAAGCTAAAAATCAATTCATTCCTTAAGCCCAGAAAGCACTCAGAAGAAATTTCCATCCCATGAAATTTTTGACAGGATCCCAATATTTGCTGTGTGTTCACTGAATCTGCATACTTTCATTCCCACTGCAGTCATGCTTGCTCTCATTTACAGCCCAAGCTCTACCTCCTATCCCATGCACTCAGTGCTACTTGGGCTCAAAATATTTCACTCATGGAAACTGGGTAAATATAGAAGGCTACTCTCATAGTTCAGACCATATAACCCATGTTCACAATGTGCCAATGAGTACCCTTACTCCTCACTACAGTCTCCCCTTTCTCTTCCCTTTCCATTTGATTCTGTGGGAATGATTTCAAT------TACAACTAATTTTTACTAGCTCTAACCTACTATTTACACCCAATCGCTTCTCTCCATCAGGAGTTCTCATCTGAGACACTGATT---------------------------------TACCTTGTAAAATTTCCCTTGTTTATC-TCAGTGTACATAGAAACAAGACATAACTTTCTGATTCTTATTGGTCTCTAAATGTTTGTTCCTAGT s rn5.chr14 99325167 663 - 115151701 TTTGACCAAATGACCAAGAACATCTTCTATGATGCTTCCTATTGGAAACTGCTCGGGTCATTTCCCCTGCCACAGTTCATCTACTGGGCTCAATCTC-----AAAAACCCATTCAGCCTATATGCCCAGAAAGCAC----AAAGAACTCCCATCTCAAGAAAGTCCTGACAAGATGTCCACATTTGCTGTGCTCTCACTGAATCTGCATTCTATCATTCCCTCTACAGTCTTGCTTGCTC-CTCTTACAGCCCTAGTTGTACCCCTTGTCCCATGCACTCAGTGCTACTTGGGCACAAAGCATTTCATCCATTAGAATTGTGAAAAGAT-CAAGGCTGTTCTCATAGATCTGAGCATATAGTTCATGTTCATACTGTGTTAGTCAGTTCCCCGACTCCTCCATACACATTCCCCTTCCTGTTCTCTTTATATTTGATTGGGTGGGCATGATTCGAGTAAGAAATACAACCCAGCTTTACTATATCTGACATACTCTTCAAACCATATCTTTTCTTTAATTAATGAGTGCTCATTTGCAAAATTTACCCTGTATACCTTTAGTATACATGGAAAGAAGGCATAACTTGCAAAATTTACCCTGTATACCTTTAGTATACATGGAAAGAAGGCATAACTTCAAGAGTCTTATGAGTCTCTGAATGTTCGTTCCTAGG i rn5.chr14 C 0 C 0 e papHam1.scaffold30449 2509 1546 + 21515 I a score=22747.000000 s mm10.chr5_JH584296_random 165376 370 + 199368 GGCTGGCTGGCATCATGT-ACCACTAATCCTTATGATAAGACAGACAGACTTGCTCTGATA-GCTGAACCAGCTCTCCATTATGGCCTACCGTAGGACCTGATTCATCTGGGATATGAAAAAATGGACGCAGAACATGAAAAGTTGCTGGAGACAGTTGAATAAGAAGAACTGAGAAGTAAACTTGTTGATACACTTGGCTTCTCTGACTCTTGTTCTATT------GAAAATAGGAAAGGTGATACCAGGAAGGGATACCAGGAAGACTTTTCAAAGATTTCACAGCTGCCCAAAGTAGTGAACAAAATATGCCAACTCTAACAGGGTTCA------ATTCAACTCCAATTCAGTGATGTGCTCTGCATAAAAAATATTCAAG s rn5.chr14 99325830 374 - 115151701 GAAT-GCTGGCATCATGTCCCCACTAATCC-TAAGATTTGAAATACAGGATAGAT-TGGTA-GCACTCTCAGCTCTCCATTTTTGCTTACCCTAAAATCTGATGCATCTGGACTCTGAGGAAATGAACTTGACTAATGAAGAGATGCTGCAGACAGTTGAATTGAGAGAACTGAGAAATAAAATTGTTGACACTCCTGGTTTCTCTGACCCTTGTTCTTTC------AATTGTAGAGAAGGTTGTCATATGGAGGGGTGCCAGGATAAGTTTGCGAAGATTTCTCATCTGTCCAAAGTAGTGAGCAAAATGTCTCAGCTGTAACAGAGTCCACTTGGTATGCAGTTCTAATTCTGCAATGTGCTCTCTGTCAAAAACATTCAAG i rn5.chr14 C 0 I 4515 s papHam1.scaffold30449 4055 366 + 21515 GGCTGGCTCACAGTAGATGCCCACTAGCGTTTACTGTGACAAGAAAGGCTCTGCTGTGGTCTGCAGAGAAAGCTCACCACCCTTCCTCACCTGAGCAGCTGGTCCAGGTGGCCTTCAAGGAAAGATACAGAGTTCATATAAAGCTTTTGGAGGTAGCGCAGCTTGAGGAACTGAGAAGTGAACTGGGTAACAAACT-------------CCTTCTTCTTCTCTGGGGAAATGTAGCGAGAGACATCCACATCAGAG-----AGAACGAGCCTGTGAAGATTCCTCATCTGGCCCAGGTATGGGGTAAACTCTGCCAGGACGGGTAGTGTCCAATTGCAATTCACTTCCACCTCCTGGATACAGTCTAGGTTGACTATTTTCAGG i papHam1.scaffold30449 I 1546 C 0 a score=155.000000 s mm10.chr5_JH584296_random 165746 53 + 199368 GGGGCgcaga----gttggcagacaaccccaaggtccccagaggactctctacagta s papHam1.scaffold30449 4421 53 + 21515 ACGTTTCTGATATTGTGGAGGGGCATTCCCAACATTTTCAG----CTTCTTACAGCA i papHam1.scaffold30449 C 0 N 0 e rn5.chr14 99326204 4515 - 115151701 I a score=0.000000 s mm10.chr5_JH584296_random 165799 10966 + 199368 tcttaggaccccctggtgaatggaacacaagttctgttccaatctaatagcgctggacctgagacagcattaattagggaaacagaaaatgcggcctgaccagggtcacaagttccttccttttggcgccaggacctggtcaccttaggcatgaagtcagcggacacccccaaggtcactagaggactctctacttgatcttaggacttctggtgagtagaacacaacttctgccagtaggcaggttcaaacgccagatatctgggcaccttccctataaaaggagagcttgcctgcagagagtgctctgactactgaaactcaggagagagctagtctcccaggtctgctgatgagggctaacagaatcacgacatcaacaagctctaaccagagacaactataacaaatatgtccagagaataccagatgaagaaaggcaaacgtaagaatcttactaacagaaaccaagaccaatcaccaacatcaaaacgcagcactcccaacttgtccagccctgggcaccccaacacacctgaaaagctagacctggatttaaaagcatatctcatgatgatggtagaggacaccaagaagaactttaatagctcagttaaagtactgcaggagaatatgctaaagagttacaagtccttaaagaaaaacaggaaaacacaaccaaactggtagaagtccttgaagaaaaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatactagacctaaaaagggaagtagacacaataaagaaaacacaaaatgaggcaacactggagatagaaaccctaggaaagaaatcaggaatcatggatgagagcatcagcaacagaatacaagagatggaagagagaatcttatgtgcagaagattccatagagaacatctgcacaacaaccaaagaaaatgcaaaatgcaaaagaatcctaaatcgaaatatccagaaaatccgggacacaatgagaacaccaaacctacagataataggagtatatgagaatgaagattttcaacttaaagggccagcaaatatcttcaacaaaataataggagaaaatttcccaaatctaaaaaagacacgctcatgaacataaaagaagtctacagacctccaaatagactggaccagaaaagaaattcctcccgacacataataatcagaacaacaaatgcactaaataaacatagaatattaaaagctgtaagggaaaaaggccaagtaacatataaaggcaggcctaacaaaattacaccagacttttcaccagagactatgaaagccagaagatgctggacagatgttatacagacactaagcgaacacaaatgccagcccaggctactatacccagccaaactctcaattaccatagatggagaaatcaaagtattccaggaaaaaaccaaattcacacattatctttccacgaatccagcccttcaaaggataataacagaaaaaaaatacaaggacagaaaccacgccctacataaagcaagaaagtaatccttcaacaaacgtaaaaaagaaagacacaagaacagaattccaactctaacaacaaaaataatagtaagcaacaattactttaccttaatacatcttaatatcaatgaactcaatttcccaataaaaaacatagagtaacagactggctacacaaaaaggacccaacattttcctgcctacaggaaacccatctgagggaaaaagacagacactacctcagaataaaaggctagaaaacaattttccaagcaaatggtctgaagaaacaatctggaataggcattctaatatctaataaaatcaatttccaacccaaagttatcaaaaaagacaaggaaggacacttcatactcatcaaatgtaaagtcttccaaggagaactctcaattctgagtatctatgctccaaatgcaagggcagccacattcattaaagaaactttagtaaagctcaaacacacattgcacctcactcaataatagtgggagacttcaacacaccactttcatcaatggaaagatcgtggaaacagaaactaaacagggacacagtgaaactaacagaagtggtgaaacaaatggatttaacagatatctacagcacattttttcctaaaacaaaaggatatactttcttctcagcacctcatggtaccttctccaaaattgatcatataattggtcataaaaaaggcctcaaaagatacaaaaacattgaaattgtcccaagcatcctgttagatcaccatggactaaggctgatcttcaataacaacataaataatagaaagccaacattcacgtggaaactgaacaacactcttctcaatgatacctttgtcaaggaaggaataaagaaagaaattaaagactttttagagtttaatgaaaatgaagcccatacataccccatgttatgggacagaataaaagcatttctgagaggaaaactcatagctctgagtgcctccgaaatgaaactagagagagtacacactggcagcttgacaacacacctaaaagctctagagaaaaaggaaggaaattcaccacaaaggtgtagatgacaggaattaatcaaattcaggggcgaaatcaaccaagtggaaacaagaagaactattcaaaaaatcaaccaaacaaggagctggttctttgagaaaatcaacaagatagataaacccttacccagactaatgagagggcacagggacagcatcctaattaacaaaatcagaaatgaaaagggagacataacaacaaatcctgaaaaaatcaaaaacacatcagatctgtttataaaaggctatactcaacaaaacaggaaaacctggatgaaatggacaaattttagacagataccaggtaccaaagttaaaccaggatcaagttaatgatctaaacagtcctatatcccctaaaaatttagcagtagtcattaatcgtctcccaaacaaaaaaagcccaggaccagatgggtttagggcagaattctatcagaccagatagagaacttcagaccaatttctgttatgaatatcgatgcaaaaatactcaataaaattcgagctaaccgaacccaagaacactttaaaacaatcatccatcctgaccaagtagattttatttccacggatgcagggatggtttaatatacataaatccatcaacttaatccattatataaacaaactcaaagacaaaaaacacataatcatctccttagacgatgagaaagcatttgacaaaatccaacacccattcatgataaaactcttggaaagatcaggaattcaaggcccatacctaaacatgacaaaagcaatctacagcaaaccagttgccaacattaaagtaaatggggagaagctgaaagcaatcccactaacatcagggattagacaagtctgcccactttctccctacctattcaactttgtacttgaagtcctagccaaagcaattcaacaacaaaaggagatcaacgggatacaaattggaaaagaagaagtcaaaatatcactttttgcagatgacatgatagtatatataagtgaccccaaaaattctgccagagaactcctaaacctgataaaaagcttcaatgaagtagctggatataaaattaactcaaacaagtcaatggcctttctctacacaaagaataagcaggctgagaaagaaattagggaaacaacacccttctcaatagtcacaaataataaaaaataccttggtgtgactctaactaaggaagtgaaaggtctgtatgataagtacttcaagtctctgaggaaagaaattaaagaagatctcagaggatggaaacatttcccatgctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaagcaatctacagattcattgcaatccccatcaaaattccaactcaattcttcaatgaattagaaaaagcaatctgaaaattcatctgaaatacaaaaaacctaggatagcaaaaactcttctcaaggataaaagaatatctggtggaatcaccgtgcctgacctaaagctgtactacagagcaattgtgataaaaactgcatggtactggtatagtgacagacaggtagaccaatggaatagaattgaagacccagaaatgaacccacacacctatggtcacttgatttttgacgaaggagataaaaccatccagtgaaaaaaagacagccttttcaacaaatggtgctggcacaactggtggttatcatttagaagaatgtgaattgattattcctatctccttgtactaaggtcaaatctaagtggatcaaggagctccacataaaaccagagacgctgaaacttatagaggaaaaagtggggaaaagcctcgaagatattggcacaggggaaaaattcctgaatagaagagcaatggcttgtgctgtaagatcaagagtcaacaaatgggacgccatgaaactgcaaagcttctgtaaggcaaaagacactgtcaataagacaaaaaggccaccaacagattgggaaaggatctttacctatcctaaatcagatagggggctaatatccaatatatataaagaactgaagagggtggactccagaaaatcaaataatcccattaaaaatggggtacagagctaaacaaagaattctcacctgtggaataccgaatggctgagaaacacctgaaaaaatgagcagtatccttaatcatcagagaaatgcaagtcaaaacaaccccgagattccatctcacaccagtcagaacagctaacataaaaatttcaggtaacagcagatgctggcaaggatgtggagaaagaggaacactcccccattgttggtgggattacaagcttgtataaccactctgaaagttagtctggtggttcctcagaaaattggacatagtactgcaggaggaacctgcaatacctcccttgggtatatatctgttctgtccggccagtagatcacaacatgggttctagcctggaaaggcattttggaaacctggaagagaagaggggctaggtggcaagataaagaaatgcagctaagacaggcattctgatcaaagctcaattttactgttctgcatgcaattataaagcaggggaagggggcccgattctccacaattaatcttggagtccaatagcagggtgaccacgtgcacggctccaaacagcaaagaggcaggttccagcagtgggcatggcagaacaattgaatgggaagctccacccctgagcaaacaggtttcaggctgggggaggggagactacatctcctcccttttgttaacaaaaaaagaaaaaaaagaaaaagatggcctaaggcaaaaaatttatttatgctctgtagttttgcctgaattttagggctaaagaaaaaaacctgtcttagtgggattccctaactttttttatggtaaactgtatctggctaagactgtcctttctatcctagtaaataactaacagaaaagcctggagctgtaggctctgactttataatgctaattagtactgaataggtaacttcctagttgaattttaagcaaggcgttggaaccctggctaagtttggctgaacaaatttgaaatacactttattaagaataacactTAGTTGATATTCCTCCACACttttggatgacaggcgggaaacagggaggaggtgtatgaccggctccatagtacaaggccaattggctttttatattggggtgggaggcagtgaagacagtatggtctccaacctctctccccccattaattaagttaaataaggcaacgcttaactgaggtgatcaaaagattttctcatccatagatgagtgggcttttaaccttggcttgggtggacattgacaggattcctcccatgggtgctgtcacgacccacacctgtggctcttggtatgttttggggaggggaggcagagccatagatattttttgtttattagatatcaacctcctttttaaaccgggtataacccacaggaaaatcagaaatggtcaagctggacttgtccctgcagtagttctctgcaccaagcgatacccatactatattcgtatgattacgaaatagtatgcacagttctgagtactgtgtagctcctaaaggagaattatcaacctcagatttagcaaggcctaggcaagaattatgttattagtaacaccacgatttgtggctaaaataggagctggaagtcgtttctcctcatccctgtattttccacagcctgaggaactaaggacaccttgcagtaacagcaagggtgaaaagccagaggtcagctaagggactaaacccatctatcaaaataaaaactaatctctattaatattagaaatatctacttttctagccctcttggtaaacctaatttttaacttagactgaaagccacgtgctggaatgtcctgggactgaagtaacagctgccacctgtgcgctctagggggcggggatgtacatctgctgatctggctggagaatgttgattaacctgcttgaaacacaaaatctcaacagtgagaaagtaggaaagcagaaattcttttgggaaagtccaggtactttatttaaatgtaaatagtaaagctgaggttaatctctagcctcctgttgggtagcaggcccagagagtagcaggaaaagagttcttctgggagcattcattcccagctgaattttaagcacaagaggaattttagtcttcagaatgatacttaagagaagagtcagaatctgtgttcatctgatgaattaatctctcGGcagaagatattccaactagcaagaaagacacatgctccactatgttcatagcagacctatttataatagcccgaactggaaataacccagatgtccctcaacagaggaatggataaaaaaattgtggtacatttacacaatggactactactcagctattaaaaagaatgaatttatgaaattcctaggcaaatggttggacctggatggcattatcctgagtgaggtaacccaatcacaaaagaactcaaatgatatgtactcactgatatatggatattatcccagaaacttagaatacccaagatataagttacaatttgcaaaatacatgaaactcaagaagaagaaagaccaaagtgtggacactttgccccttattagaattgggaacaaaacacccatggaaggagttacagagacaaagattggagctgagacaaaagaatggaccatcttgagactgccatatccagggacccatcccataatcagcctgcaaaggctgacaccattgtatacactagcaagattttgtggaaatgaccctgatatagctgtctcttgtgagactatgccgggcctagcaaacacataagtggatgctcacagtcagctattggatggattacagggcccccaatggaggagctagagaaagtacccaaggagctaaagggatttgcaacactataggtggaacaacattataaactaaccagtaccctggagctcttgtctctagctgcatatgtatcaaaacatggcctagtcggccatcactggaaagagaggcccattggacaaactttatatgccccattacaggggaacgccaggttcaaaaagtgggagtggatggtaaggggagtgcgagagagggtatgggggacttttgggatagcattggaaatgtaaatgaggaaaatacctaataaaaaacaataaaaaaaGAAAAAAAAAAGCAAGTGAATGAAAGGTAGATAGAAAAATGGGAGAGACTCACAGGACTCAATGAGGATGTCACtgtgggaaattgcaggctagtatccagttgagctgaggtctgaaccccgatggtcataattcaccttcatgacatgttaggcattccctcatggtcctggaactctgacccctccctaagttaccgcccaccacagcccccacaagagaagcatggtcagtagtgacatagacaatggcccaagcttctgaccttcatgctcaactcctacacagttacctagcaacagtaaagaccataaaagaggtgttcagcccacaactcactctctcttactcttatgctcttacttcttacccttcattctcaccctctctctcccctctctttgtcttctctcctcttctctctccctctttctctcctctctctctctcttgcttgctctctctctctctctctctctctcccttctctctccctgcatttctataataaagctcttaaaccagagagagtctctgctccatcaagatccactgtgcactctggtcagtgttgggaacctcttcccttattcctcgctctcctaaccctggggctacagggtgtggccttggggttctcagatcaggggctgccccttctccatcccctgctaactgggacagaagctatgctcacccagggccaagtggaaagtgtccatcagccctccagtgcctgcgtccacctgcccagagtacaggaactctggccagatatgggccccttttcccttccccctcctcccagggccttcctctGCCCCCCCCCCAATTTTTTTTGTTcccaacatgtccctagctgaaataaggagcaaaggagagatagaaccttaagagactaccctcagtgcataggcatggctctcagttgagcgaagcagccagtcagccatctcgaaattttaacccTGagctgggcagtggtggcacacacctttaatcccagcacttgagaggcagaggcaggtgggtttctgagttcgaagccagcctagtctacaaagtgagttccaggacagccagggctatacagagaaaccccatctcttgaaaaaatgctcagcatccttaatcatcagggaatagcaaatcaaaacaaacctgagatgccacgtcacaacagtcagaacggctaaggtaaaaaattcatgtgacagtagatgctggaaaggatgtggagaaagaggaacactcctccattgttggtgggattgcaaacttgtacaaccactctggaaatcagtctggtggttcctcagaaaattggacatagtactatcggaggatccagtaatacccctcctgcgcatatatccagaagatgttccaactagcaataagaacacatgctccactatgttcatagcaactttatttataatagccagaagctggaaagaacccagatgtccctcaatagaagaatggatacagaatatgtagtatatttacagaacggaatactcagctattaaaaacaataaatttatgaaattcctagtcaaatggatggatctggagggcatcatccagagtgaggtaacacaatcacaaataactcacgtgatatgtactcagtggtaagtggatattagcccagaaacttagaatacccaagacacaatttgtgaaacacatgaaactcaagaagaacaacgaccaaagtgtggatactttgccccttcttagaattgggaacaaaacacccatggaaggagttatggagctgagatgaaaggatggaccatccagtgactgccccacctgggggtccatcccataatcagacaccaaacgcagacactattgcatacgccagcaagattttgctgaaaggaccatgatatagctgtctcttgtgaggctattcgagtgcctgacaaacacagaattggattctcacagtcagctattggatggaacatagggccaccaatggaggagctagaggaagtatccaaggagctgaaggtgtctgcaatcctataggtggaacaacaatatgaactaaccagtgcccccagaacttttgtctctagctgcatatgtatcagaagatggcctagttggccatcattgggaagagaggcctcttgatcttgaaaactttatatgccccagtactggggaaacaccagttccaagcagtgggagtgtgtgggtaggggaacagggtggagggagggtatagaggacttttaggatagtatttgaaatgtaaatgaagtaaatacctaatttaaaaaaATTGGAAAAAAACCCTCTCTCGAAAATCAAAACAAAACAAAACATAaaaatttaaccctgaattgttcctgtctaaatgaaaaatagttacaaaaaatggagcagagattgaaagaaaggccatccagagactgggatcttgggatccattcaattagcagacaggaaaccccaagactgttgctgatgccaagatatggctgtcctctgaggggctatgtcagcatctatctaaggcaattgcagacactcacatccagctaatggattgaccttggggaccctaatgaagtagatctggaaggactaaaggagctgaaagggattgtaacccttaggaagcaaacaacatcaactgactggactcctcagatttcccagggattaagtcaccagccaaagtgtatacatgaattggtctatggttcgtgatacatatgtaacaaaggattgctttatcttgcatcaatgtgagaggaaccctttgtcctttggaggcttgtttccccagttaagggggatgctagtggggatgagactggagtgagtgggtagggtacaccctcttagaggtaaaggggaagagaatggaagggggtgtggaggtgaaaactggaagggagaaaactccagctgcatatgtagcagaggatggcctctggggaatcaatggcaaggaggtgggagtgggtggctgggtagaggaacaccctcatagaagcagggggagggaggatatgatagggtgtttcctggagggatgaaaactgggaaaggggatggataaaatttgaaatggaactaaagaaaacatccCCGAAAATGAGAAATTAATAAAATGGTCAATAAAAA e rn5.chr14 99326204 4515 - 115151701 I a score=99741.000000 s mm10.chr5_JH584296_random 176765 2287 + 199368 AAAggaaaaaaatggcgaggagttatgggatgaggaacaataagagctcagaccaggattgggataaggactgtactgtaaataaagaaTTTAAGGAATATTAAATTTATTAATAAagaaaaagaaaaaacgtaaaataagaaaaaaaaacaaagcaaccaaccaacaaaatcaataaaaccaaaccaaacaagctaacatacaataaaacaaacaaaTACATCCTGTGTTGAGGATCAGTATTGAATTCCCAT-AAGCAGGTTGATGACAATGAGTTTCTACAATTTTCAGGCATTCCTGGGTCGCAAAAGCATATCATATCCAAAAAAGAAAACTTTGTTTAAATGATGCAAAG--ACACATGA-GTAACACGC------------AAGTTTCATTCTAGCTATTGGGAATGGAAGGAGATCAAAGATGCATGGTCTACA------------ATGTGAGTAAGGGTCTCACAAAAACAAATAAAGACAATTACTTCAGTGAAAGGAAACAGGAGGGAACATGTTAGTCATAATGATCTGATTTCTACCTTACCAAGACTCACATGG---------------TTAACAACATAGAGCATACTTGTCTCAAAAAATTATATGGAGAACACCAATGAAATATATATGCTATCATAGAAATATATTGGTGATGAGGCTAAAACTTTATTTGGAATGAAAGCCAACATCTTCAATGTGTTCTTCTAAAGAGATGGAAATTAAAATTTGGAATCCTATCCTGGAGTCTAAATTTCTCTACTTCAAACTGCATGACTGAAGGGAAAATCATGACAT---GCCTATTGTAAGCACTGCAGATCGGTCTCTGAGTCTCAGACAAACCAGGCAGCTATCCAGGCTCCAGGTCTCTGAATATTATCTATGTCTCCACTGAAGCCTTTATAAAATTCTCTGCCTACTCCTCCCTGTTGCAGCCATGCCTCCAAACACAAACTGGAATTGAATTAGATCTTTAAACTCCACCCTTTAAATTGTATTCATAACATCCATT--------ACACGGATTGATTCAGAGCTCATTGTGAGTATATCTCCATATTGCCCCACCCCTCAAACATTTCACTTATTAATTAACATCACATCACTTAATTTGTGATATTTTTCCTTCATTTGCTTAATTATTATGTAgttttgagtttgatatgacaggtctgtgtcttgctctgaagcta---tggttttataaatctaagttctagcaatcctcctgcctcagcatcctttttcctgctagtactactgttttgaatcactgtacctggGTGAATGTTGTTCATATGAT-TAAATCAGTCTGA-TTTGCCTCAGAACAGTGTTTAGTCTGTTGCTGATAATAGACAAAAAAATAATTCATAGATATTACTGTCACTTGATTTGAGAAAAACAATTTTTTAATAGTCAGGAATATGTTCTGGAGCTCAAGGACTGAATTAGATGCTTTTGCAATAAACTTCAGTAATACCTACACAAAAGTTAGAGGACGGGGCAAGGCTTGATTCCATTAACATTGTCCCAGGATTctgggtgtgtattcagtttgtaaagagttatccagcatacaggaagtcctctctccagcaccacatgcagcaaacaatatggccatgcctagaacatcacaattcaaaagttggaagcaagaggatcaattcaaggccatcctcagccatattgttaagagaaggagagcctgagccttataattggccccacttcttaacagagccaaaCACAATCAGAAAACGGTGGGTCTGAGAGAGATGCTACCCTTAGCAGACAGAAAACAGATAATGTGCCAGGAAGGATCAGGCCAGCATGCTTGCTCAAGATGAAATCAGGTGTGGGATCGGTGCTGTGGAGTTAGCTGCCCAATAATGAGCACCTGTTAATCttctattcccagcacctacttgatgac------------gtgactccagttttttgaaatctgaagcctacttctgaccttcttgggcactttcttggcatacatgtggtgcacattcatatattcagggaaaacaccaaaacaaagagaacaaGTCATTAATAAAAATAAATCTGTAAGTAGAAC------AgtggcaaacccctttaatctctcaaatctggaggcaaaggtagcctgggttcgatgagtttgagactagccttatgtaagtagatatgtattaactagtgaagcctatggagtaaacatctgttttagaaTTTAACTAGagctggctgggctggcacataattctaatcccagcttcctacagacagaaggaggtagacctttagagcccagaccgatctacagaaggaaatgtgagatggg s rn5.chr14 99330719 2302 - 115151701 aaaagaggaaAATATggaggaggaattggatgaggaacacatggaggccagaacagtaggggtagaaggactagaatgtaaaaaTATAATC-AAGAAATATTAAATTTGTTaataaaaaagaa----------aaaaccatataaaagaaaaaactaaccaacaagcaaaaacaataaaa--aacagaaacaaagaagcaaacattagaacaaataaa---GTATTATGTTGAGGGTCAATTTTGAATTCCCATTAAACAGAATGACAAAAGTGGGTTTCTACTATTTTTAGGATTAT-------GTATAAGCAGACCATATCCAAAAA-TAAAACTATGTGAAAAAGATTCAAAGCAAAACATAATGTAAGACATTTCAGCAATTCAAAATGTAATACCAGGTATTGTGTGTTAAGGAGAACCAAATATACATGGTCTACATACAAGTCTCCAGACTGAGGCAGTGTCTCACAAAAG-AAATAAAGATGATCATTTCAGTGAAGGGAAATACGAGGGAAAAGGCATTTCAAAATGATCTGATTTCTAGCTTAACAAGAGCCACGTGGCCCATTCTAGTAGTTTGAACAACATAGAGAATCCTCACAC--ACACATTATACGAAGCACACTAATGAAATAAACAGGCTATCATAGAATTATATTGGATGTGAGGCTAAAACTTCATTTAGAAAAAAAAACAAATTCTCTAATATGTTGCTCTAAAGAGAGAGAAACTAATATTTCCTGTCATATCCTGAAATCTAAATTTCTCTACATCAAACTGCATGACCGAAGTGAAATTCATTACATACCACCAGTTCTGAGCACTGCAAATAGGTCTGTGAGTCCCAGCTGAATCAGGCAGTTATCCAGGCTCCAGGTCTCTGAATACTTCCTCTGGCTCCAATGAAGCATTTATATACCTCTCTGCCTATCCCTCCCTGTTGAAGCCACACCTCAATTCTCAACCTGGTACTGCATTCCATGGTTAAGCTCTACCCTTTGATTTCTATATGTAACTTCCAACCACTTAAAGTATTGATTGAGTGAGAGCTCTCTGTGAGAATACCT------------GCCTCTCAAACATTTCACTTGTTTATTAACAAAACATCAATTAATTTTTGGACTTT----TTCACTTGCTTACATATTAAATAGTTTTGAGCTTTGTATGAtgggactgggtcttgctctgaagctaaggttgttttagataccttagttccagcaatcctcctgcctcagtatccttcttcctgctaggttttctgttgtaaatcactatacctggGTGAACTTTATTCATATGACAAAAATCAGTCTCATTTTGAGTCAGCTCAG-GGTTATTCTGTTGCTGATAATAAAC-ATAAAATAATTCATAGACATTATTGTCACTGGATTTGCAGCAAACAA-CTTTTAATACTTAAAAATAGGTTCTGGTGATTAAGGAGAGAATTGGATGCTTTTTCAATAAATTACAGTAGCTCCTACTTGAAATGTAGAGGCAGGAGCATGGCTTGATTCCAGTAATATTGTCCAACggtgctgggtatgaactcagtttgtagagaactatgcatcatacagggcatcctctctcaagcactgcaaagagcagatatgatggccatgtct-gaacgttacaattcaagagttggaagcaaaagcatcaattcaaggacatattaagtcatatTGTATAACGAAAGA------CATTCTTACATTTGGGTCCATTTATAAATAGACCCGAAAGAAAATTGAAAAGAGT--GTCTGAG-GGGGTGCTGCCATTGGCTTCTAGAAAGCAGAGAGTGTGTCAGGTGGGATCAGGACAGCATGCTTGCTCCAGATGAAATCGGGAGT-AGACCTGTGATAAGGAGTTGACACCACAATAAGGAACATCTGTTAATCttccgttgctggcccagatatcggggcttaaaataatctgtgactctagtttttggatatctgaagcttccttctaagtattttgtgca----ccaggcatgcatgtggtacacattcacattttcacagaaaacacacgaacacagagaacaaaCCTTTAAGAGAAATATATCTGAAAGAAGAACTgatgtaatggcaaactcctttaatccctgcactctgaaggcaaagatagactgtgttcagtgagatcaaggcaagcctTAACTAACTAGGTAATTATTCACCAGGGAACCCTATGGAGTAAAGGTCT-TTTTAGAatgaaatcagagcttggtagagtggcccatgactttaatcccagcacccaaaaggcagagtaaggcagatctttagaaccatgactgatcttcagaatgaagtatgggacagg i rn5.chr14 I 4515 I 600 a score=0.000000 s mm10.chr5_JH584296_random 179052 5 + 199368 ggaac e rn5.chr14 99333021 600 - 115151701 I a score=54372.000000 s mm10.chr5_JH584296_random 179057 1118 + 199368 tctaaaatagagaaatacactctcaaaaaCCAAACCAAACCAAAC-------------------AACACAAAAATCTAATTTagctgggaggtgctactacaggcctttaattccagcatttgcgaggcagaagtaggtggacctctgagtttgagctagcctggtctaccaagtgagatctgggacagccagtcctgttaaacagaatgcctgtctcaaaagtgtaaaaacaaaaAATGAAAAGTAAATGTTTTCTAAAAAAAAAAAAACAACAACTTTAAGAGATCTTAGTAggctgtgagatggctcagtgatcaatggtacttcctaccaagcctgaatgcaacaatgggacc-acaggtgtaaggagagaaaccactacaggttctagtgctcccaagtctacatgTAAAGTCCTCTGCCAACACACCAACAC--------------------ATTCCTCACAcccaggtaaaatatgaaggcctagatggaatttaaggcctaggtaactgtttcctctctgcc---aagtataaggaaactttctcatatgttcctgctcccactaggaaactttctaatccccaaatcaattacatattctgttatgtactgtgccaatagaaatggatcatgatagaagtcagtagatctgttttgtatagttacccacaataaactagaacccaaaccaaccacccaacagcacttcatgcacttatgtataa-gatttatagtactttcctttgtaagctggccctgggatggacccc-aacataagagaagcactcatactgatataaaaaactatttgggataagatttccattttgagtagtggttcagtttagtgtaagttcccctggaccttcctggcaactaacatcttacttggcagatggagacacgtacatgtatgtgggtaactgacatcctggttggcaagttaagatataaagtttag-taagtcccattctgg------------------------agtcccatgctacagttcaatactccaacccatgg-agcaggacagctgtataacaaagacatgttcttttaggaatcctttaaccctaaatcttgattggtgaaatatctcggcacagatctttgtggattttgtgcttgagaaccctgtaggatAGAAGAAAGCTATGGCTGGCTT s rn5.chr14 99333621 1157 - 115151701 TCTAAAATAAAGAGT----GTCTCAAaaaccaaaccaaaccaaaccaaaccataccaaGAAAACAAAAACAAAATCTTGTTTAcctagaagg-gctactacaggtctttaatcccagcagtgaggaggcagaggtaggtggacctctgagttttagctagccatgtctacagggtgagttctgggactgccagtttt-ttaaacagacatgctgtctttgaaaaatcaaaaACAAAACTGAAAA---AGTGTTTTCTAATAAAAAAAATCTATGAGCTTT-----------GTAggccatgagatggctaagtggtcaatggcatttgctaccaagcctgaattcagcattgggacccaaaggtgtacagagggaaatcacttcacgtgctagtccttccatgtctacatgcatgcTCCTCTGCCAACACACCAAAATCATTTGTCAGAAAAAGGTAAAATTGTCagactgagataaaatatgaagacctagatcgaatgtaaggcctaggaaactgtttcctggctgtctgccattataggaaaactttctcacacgt-cttactattactaggcatctttcaaatgtcaaaatcaattacatattctgttatattgtatgccaataaaaaaggatcatgatagaaatcagtagatgtgttttgtgtagtataccacaataaactaggacccaaaccagccacccaacagcacttcctgcacctatgtatattcttttatggtatttgcctgtataagctacctctgggatagacccccaacataaggcagacacctatactggtataaaatagtatttggaataagttttccattttgaataatggtccacttaagtgtaagttcccacaaccc---ctgataactgaaatcctacttgacagaggggc-------catggatttgtgtaactgacatcctcgttggcaaattaagacattaatgttagacaagtcccattatgatatacaggaatgttagacaaggcaagtcccctgccaaagttaaataccccaaccaatgggagcagaatacatgtacaacaaagatattttcttcaggaaattcctaaaccc-aaatcctgatttgtaaaacaacttggcacagatatttgtggattttagggattacaaccatataggatAGCAGAATACTCTGACTGACTT i rn5.chr14 I 600 C 0 a score=0.000000 s mm10.chr5_JH584296_random 180175 5402 + 199368 TAATGAGTGACAGACCCTGTCATGGGTGCTTGCTCTCCCACAATCCTGAGTGTCACAGATCTGATATTCAGAGCTTGTACTGTTTtgccagggaaatgttagtggtcccccaatgtacacacaggagctgatctgataaaactcacagctgggccattattctattcaatctagtttggcccctccttcacccccaactaacttccatcatgcagaactgttttagtggtggttcagggcctaatgtctattggggcaaggctctaatagtaagcagtaagcaggagtacatgtgcaagcatctaattgaaaagctactgtggcctttaacataattggctggtacttggagtcatatcacacataaaccttctgtttcactctgcactggtggttgttaggcaaagtgtgggcttataacctggggttcaggattttggggggaatgaactggagacactggccttgttgagggtgtaacctgaaaactctgttcttgttgggaattagcctagagatggaagctagactcaggttttgttgagggcaacttggaaactaatgccaggtaacataagtttacctgagttcaaacttaggtcaggttctctaaaatggagtctgaacttaaaatatttggcctctcaTCCCCCTTTCTCTTGTGACTAGAAATCTCAATCATGGAACTTTCTGAAGCTTCATGAAATCAGTAATAGGGTTATGTCTTTTTGGTGTCCCTGGGGCATGGGTAGAGACCCATTTGTGGGAGATAGGAAAGAGTTTTGCGGCTGAATTCTCCTCCTGCTGGCCAGGGTCTTCTTCTAGTGCAAACAAATGCTTGGTGAATCCGTGCTCCAACTCTGTAGCACAGGGACCCTTTTAGGGAAGCTCTGGCAGTGTCTCTTGACCAAGGTACAATCTCTGGGTAAAGTTGGTGGAACTCTAGAGGTGGTCATGTTTTATGGGAAGCATAAAGGTTAAGCCAAACACATTTATGTACCCATTGGACACACTTTAAATTGTGTAACAATTAGCAATCATCTGTTTTTGTAATAATTTCTGTCAGTAAGTGAACTAAacataatttccaaagggggaagccctatcaggtacaggaagttctatactctataaggatgaaggggagaagtgtcacccagtcaccatcagtctttaaggtcaatttagttagtgtctcctttggggttctatttatcttctctaactgacgtgatctttggtgtctataagcacatgaaatttccagtcaatccccagaatattagctaatctctaacttacctgggacacaaatgtaggtccattatctgaccctataaacttaaaaaatatatatcttggaagaatttctttgttaccatctgtatagtttcatgttaattgggaaagtctcaatctatcctggtaagatatctataaatatcagcaaatgtttgtacccagatttatttggttttatttctgtagagtccattccctgatagactcttggcTTGGTGATGTGATATTGAGTATCAGGGTCTTTCTCATTGTCAACCACATTAGTTAATTGACAGGCCTCATAGTTCTTAACAATGTCAGCTGGTTTCAAATTGGCATCCTCTATCATTAATTGTGACACTGAGACATGGGCCAGTTTTGGCCTAGATCACATCTTCTGACTGGTCAGAGTGTGTGGGATATCCTGAGTCTAGTGAAATCAAGGGCATGAGAAGTCCAGATTCTAGGGTCATTCACTGGGCTGACTTCTTTCCCACTGGTTGGAATCTAgtcattgacagtgaatgatggccagctttttaggctcctatagaagccttagtatgaagaggatatcctctatatttttgataatccttcctggggtggtgagtaggcctctctcttataaataggcctacagcaatgagcagtagcaaaggcaccctggccgtctgggtctcttgtcttttctcagctctaaagcattggtcagagttgctagttcaaacttctgggctgaaattcctgccaggagtggctctttccatatgatcttggtgtctgagacaactgctgttccagcatacctctgttaatctggaatgaggctgttgccatTGGTGAACAATGCCATCACTGCATCCATCTGAGCAGTCATGCAGAGGCCCAACCACTGTGGTAAGGATCAGGCAACAGGCTAGCTGAAAAGTTATCCTGGGGCACTCAAAAAAAGAGGCTGGTAAGGAGTCATTCTGCCATCTTCTTTAACCAGGAGGTTGTTTCTGTACTGATGTGTAAACAGGGCAGGTTCCAGCTTCTGCCAGTTGGTGACACATTAGCCATTAGCTAATAGAAGGCCCGAATTTTGAATATGTATCCCCAGTTCTAGGGAGCTAACCTGTAGCTGACAGGGTAAATCCATTTTAGTGGAGGCTTAATAGTCCAAGCTTGTCAAGGTCTCTAAGAGGACCTGGATTTTTTATTACTTCTGTTGTCACAAGAAAGTCATTTATACAGATGAAGAAACTTTATCTTCAGCCTTTAGAAGACAAAATGTTGAAACTTATTAACTATCAACAAAAAGCTAGTGGCTTTTCCTTTGACTTTAAGTTTACCCTGGGCTTACGGAGAGGGTGCTTTTGATCGTTAGGGCCTCCTTGCCTTCTTTTTCTCAGGCTATTTGTTTTTGGCATCTCTTATGGTCTTCTGGTAAAAGCTAGAGTGATTGCTGTCTTGGCTTCTAATAATTTAGGGTACATGGATGTATATTGTTGAAATGCTTCTATGACCCTCTCTAAAAGTCTTTTActgtctaatatcatacactatggccaaatttggggtccatttgtggctgcattgagaccttccagtagagcctatggtagaccaagagcctctcccttccttcaatggtgttaaaaaatctcaatctgggcaaataaggggaaaGCAAGCACACTGTGGAAGGCTCCCCTGTGGGGCCAGGAAGCTGGTTCCTGGCCCCTTCTGTGGTGGAGGGAACCTGTAGAATACACCCTGTAGAATATGATAAAGGTAATCTGTCTCATATTAATACGTCAATCAAAGTAAAAAAAATTAGTCACTTTGTCAAAGTCACCTGTCAAAGTCACCAGTCAAAGTTATCTCATCAAAGTCAGTCATTTTGTATCAAAAACCACAAATACAACACACAAAACCACAAAAACTTCACTCTCTACAGGGCAGTAACAAGAATGACCAGAACTTAATACTTTTGAAAAACACCTCTTTATAACACCACAAACACAAATCCAATCATCTCTCCTTATTAGGTAGGAAGGAAATATAACCAGAAGCAATGCACATTCACAAGAAAGAAACAAATTGGTGGGGATTTGAGCCCATGCCCACCCAAACCTAGGCTCAGGATGGTTCCTGGCCCTGCACCCAGATACATCTATCCTCACCATAACAAACCACAAAAACAAATTCAAGGCCTTGTACCCAGAAGGATGTCACTCCATTTATAGTCAGTGAACAAAGGAACCAGAAACAAAAATCAATCAAACTAGAAaaataaataaataaataaataaataaataaataaaATAGAGTCTGTAGTAACAAGAATGAACCAGAAGATGGCACTCACAGAGAGGGATGTGCTGCCACTCAATTGTGAACATTCAGCCAGCAacaaaaaccaaaaccacatgagacacaatgaaatcagtggtaagagaaaaactcatagctctaaatgcctccaaaaatatttgaagagagcttacactaacagcttgacagcacccctaaaatctccacaatgaaaagcagcaaatacacccaagaagtgtagatggcaggaaataatcaaacttagggatgaaatcaaccaaatagaaacaaaaagaactatacaaagcatcaaccaaactaggagttggttctttgaggaaatcaacaagatagataaacttttagccagactaaccagagggtgcagtgacagtatgcaaattaataaattcagaaatgaaaaatgagacataTCTTAAAATAATTATGTTTGTTGAATATTAACAGTTGAAAACTTTAAAATCATGTCCTACTTAAAAAAATACAGCAGCTGGAAATAACAAGAACCAACCAGAAAGTGTTGCTCACAGAAGGTGGAAGTGGCACCACTCAGATCTGGAAGAAAAAATATACAGCCCTCAGTAACAAGAACCAACCAGAAAGTGGTGCTAACACACAAATGGCAACCCTCAGTACTGCACAAATGTTTCCTCAGACCTGGAAAAATCACCATCGTAGTGTGAGTCAGTTATCTTTACACAGGTTTTCCTTACACTCTTGATCTCACAGAAAGTTTCTAACATTCAGACAAATTAGCTGTTGCACAATTCACAAGTTTTTGCTCCAACGAGCAAGTGCTCACCTGGTCAGAGCACACAGAAAACTTCTGACACTCAGGTTTCTCAGCATGGCTCAAACCTAGAAGTATTACCATGGCAACACAAGCCACCAGGTTCCACACAAATAAATTATCTGAGCTTGGTTGGAAACATTTATCTCCACACAAGCTGGCTTCTGTTCTGCTCTGTAGATCTCCCACAGAAAGCTCTGACAAATTCAGCACTCAGACAGGGAAAAAGCAGAAAGTTTAACACAATGTCACAAACATAAAATGCAAATACCTAGACTAGTTTGCCACCTTCAAGACCCTCTACATCAGTAGTCTTAGGTGTCATGGGAAACTTCCCAACCAATGCACCAAAAtgttgtgccaggtatatgttagtgatcccccaacacatacccaggagccagtaagatgctatccacagtagggtttttattctattctaggtagctcatgacccccaaagcaccttcatcatgcaggactgttttggtagtaggggagccctgaatgtctatggggcaaggctttctagtaagcagcaagcagagagtatgtgtgcaaacatctaattggaaagagactgtggcctttaatataatttgcttgtgctgggtgtcatatcataaacttaacttctgttcccctctgcattggtggtcattaggcaaggggtgagcttgcaacctgtgaatgaacccacgtcgtctggaagcacatccaatgctcataactgcttagccatctctccagctcctattatatgaatcttaagaaaacaaccagaaaaaatcagcaggtgcaggtttgttggggggaataacttttagacactggtcttgttgagggtttaacctagaaactggtattgttgtggattagcctagagactggagctagactcaggttttgttggggagcaacttagaaactaatgaggggtgctaacctataattttacctgatttcaaacttaggccagTGTGACTA e rn5.chr14 99334778 0 - 115151701 C a score=34261.000000 s mm10.chr5_JH584296_random 185577 645 + 199368 TAATGAGCCAAGGTCCCCGTCTATGTTGCTTGCTCTTCCCCAATCCGGAGTGCCAGAGCTCCAACATTCAGAGCTTGTATACTTGTACTATCTCACATTTCAAGTCTGGATATTGAGATGCTC-----------AACCCAGTACATATTATTTAAAGGTGTCTAGGTGAAATACTTCCAGTCTATACCCCAGGCTAGACTCAAACTAGATAGGATCTTGTTTCTGCCTCCTTGTGTAGTATGAGCCTTAAGCCTGTCTAGCTCCCATATTTGGTACCACCAGCTCTAGACAATGTGCCAAGCTGATTCTTTCTGGTGGTTTTCTTAAGATTCATATAGTAggagctggagagagagctaagcagttatgagcattggatgtgcttgcagaggacatgggttcattcataacacacttatcatggctcacaactgtctatgattccagttccagggc----ttccaatgccttcacacaaacatacgtgcaggcaacatacaaacgcaggtaaaataaaagataaTAAAGGACATAAAAG-TCAAAAGCAGATTTACATAAtttttaaactacttattttaatttatttatctttgcactatgtagtactatgtgtattttatggatatcagtagttaggctcataaatggggttacagata s rn5.chr14 99334778 634 - 115151701 TAATGAGCCATGGGCCCTGTCCCCGTTGCTTGCTCTCCCATAATCTGGAGTGCCAGAACTCTGACGTTCAGGGTTTGTACACTTGTACAATCTCAC-TTTCAAGACTGCATATTGAGATCCTTTCTTGTTCCTAACCCCAGTTCATACTATATATTGTTGGCTAGATGAAATACCTTCAGTCTACAACCCAGGCTAGACTCAAATTAGGTATGACCTTATTTCTGTCTCCTTGTATATTATGAGC-----------CTAGCTCTCATTTGAGGTGGCACCATCTGTACACAATGTG-CAAGCTGATCCTTTCTGCTTGTCTTCTTAGGATTCATATAGTAggtgatggagagatagctaaactcttatgagcattggctgtgcttctagaggacttgggttcattccaggcacaaatatgatggctcacaactgtctgtgattccagtcccaggagaccaacccatcatcttcattcaaacatacatgcaggaaacacacaaatgccc-----ataaaagataataaaTCATATAAAAATTCAAAAGCAAATTTACATAATATTTAGACTATTTAT---------TTGTTCTTTCCACCATGTAGTACTGTGTATGTCTTATAGACATCAGAATTTAGGTTCTTAAATGGTGTTACAGACA i rn5.chr14 C 0 I 51907 a score=0.000000 s mm10.chr5_JH584296_random 186222 6883 + 199368 tttgggagtttctttgttggacactggaaaatgacctttggttctctgtaagagcagccagtgctcttgactccttagacatctcccaaccccCACTTTGTGTTCTCCATATGTCAaaaatagacttttaatacagtatgttctgattatatttgttccacccccaactcttcttagatcccctcctacttcttctttatctcaatttatgccctttctgtctcttctcaaaacaaacaggtagctaaagaataCAAGAAGGagccaagtgtggtagaacacacctttaatcctagtacttaagaggaagaggcaggcagatctccatgaggcggtctagccttatctacaaagtgagttccaggacagccagagttacacagggaaagcatgtcttaaaaacaaacaaacaaacaaaaacaaacaaacaaacaaacaaaacaaacaaTCAccctttcggtctgagcaacaccggagtagctagggtgcacagtcggctgactactgccaggtacccacaacaccggccaagcgatcttaagacttctggtgagtggaacacagcatctgctccaatccaattgcgcgggacttgagactgcagtagtcagggaagcagaaaacccggtctgagtaggggcacaagcccctttcagtctgtgcagcaccggggtagctagggcgcagaatcagctgacaaccaccagctacccacaacacccgccaagtgatcttaagacttctggtgattggaacacatcatctgctccaatccaatcgcgcgggacctaagactgcattagttaggaaagcagaaaacccggaccaagcagcacctgggtagctagggcgcagagtcggctgataatcaccagatacccacaacaccagccacatgatcttaagaattctgaggattgggatctgcccggcgcgggagcgctttgcctgagcatcagcagcagacatcttggttccgggatccagccgagtgtatcctgcacaggcaggtgaccattttcccggccagaggatagggacctgcctggcgtggaagtgctttgcctgagcattggcagcagacatcttagttccgggaccctgccgagtgtaccctgcacagacatcttggttccaggaccccgctgagtgtatcctgcacagctccagagaataccagatggtgaaaggcaaacgaaagaatcctactaacagaaatcaagaccactcaccatcatcagaaagcagcactcccaccccaactagtcctgggtaccccaacacaaccgaaaagctagacccggatttaaaagcatatctcatgatgatgttagaggacatcaagaaggtctttaataactcacttaaagaaatacaggagaacactgctaaagagttacaagtcctaaaagaaaaacatgaaaacacaaccaaacaggtagaagtccttataggaaaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatactagacattaaaaagggaagtaggcacaataaagaaaacccaaagtaaggcaacgctggagatagaaaccctaggaaggaaagctggaaccaaagatgcaagcatcagcaacagaatacaagagagagaagagagaatctcaggtgcagaagattccatagagaacattggcacaacaatcaaagaaaatacaaaatgcagaaggatccaaactcaaaacatccaggaaatacaggacacaatgagaaaatccaaacgtacggataataggagttgatgagaatgaagattttcaacttaaagggccagcaaatatattcaacaaaattatagaagaaaacttcccaaacctaaagaaagacatgcccatgaacatacaggaagcctacagaactccaaatagactggaccagaaaagaaattcttcctgacacataataatcagaacaacaaatgcactaaataaacatagaatattaaaagctgtaagggagaaaggtcaagtaacatataaaggcagacctatcagaattacaccagacttttcaccagagactatgaaagccagaagagcctggacagatgttatacagacactaagagaacacaaatgccagcccaggctactatacccagccaaactctcaattatcatagatggagaaaccaaactattccacgacaaaacaaaatttacacattatatttccacgaatccagcccttcaaaggataataacagaaaaaaacaaaacaaaacaaaaaacaaaacaaacaaccaaaaaaaagcaatacaagcacggaaatcacgccctagaaaaagcaaggaagtaatccctcaacaaaccaaaaagaacacagccacaagaacagaatgctaactctaacgacaaaaataaaaggaagcaacatttacttttccttaatatctcttaatatcaatggactcaattccccaataaaaagacatagactaacagactggctacacaaacaggacccaacattctgctgcttacaggaaacccatctcatggaaaaagacagacactacctcagagtgaaaggctgacaaacaattttccaagcaaatggtctgaagaaacaagctggagtagccattctaatatcgaataaaatcgacttgcaacccaaagtcatcaaaaaagacaaggagggacacttcatattcatcaaaggtaaaatcctccaagaggaactctcaatcctgaatatctatgctccaaatgcaagggcagccacattcattaaagacacattagtaaagctcaaaacacacattgcacctcacacaataatattgggagacttcaacacaccactttcatcaagggacagatcgtggaaacagaaactaaacagggacacagtgaacctaacagaagttatgaaacaaatggacttaacagatatctacagaacattttatcctaaaacaaaaggatttaccttcttctcagcacctcacgggaccttcttcaaaattgaccatataattggtcacaaaacaggcctcaacagtacaaaaatattgaaatcgtcccatgcatcctatcagaccaccatggactaaggctgatcttcaataacaacataaatattggaaagcccaccttcacgtggaaactgaacaacactcttctctatgacaccttggtcaaggaaggaataaagaaagaaattaaagactttttagagtttaatgaaaatgaagccacaacatacccaaacctatgggacacaaagaaatcatttcaaagagggaaactcatagctctgagtgcctccaaaaagaaactagaaagaacacacactagcagcttgacaacacatctaaaagctctagaaaagaaggaagaaaattcacccaagaggagtagatggcaggaaataatcaaactccggggagaaatcaaccaactggaaacaagaagaactattcaaagaattaaccaaacgaggagttggttctttgagaaaatcaacaagatagataaacccttagctagactcactaaagggcacagggacaacatcctaattaacaaaatcagaaatgaaaagggagacaaaacaacagatcctggataaatccaaatcaccatcagatccttctacaaaaggctatactcaacaaaactggaaaacctggatgaaatggacaaatttctagacagataccaggtaccaaagttaaatcaggattaagttaatgatctaaacagtcccatatcccctaaagaaatagaagcagtcattaatagtctcccagccaaaaaaaccccaggaccagatgggtttagtgcagatttctaccagaccttcaaagaagacctaattccagttctgcataaactattccacaaaatagaagtagatggaactctaccgaactcattctatgaagccacaattactctgatacctaaaccacacaaagatccaacaaagatagagaacttcagaccaatttcccttatgaatatagatgcaaaaatcctcaataaattctcgctaaccgaatccaagaacacattaaagcaatcatccatcctgaccaagtaggttttattccagggatgcagggatggtttaatatacggaaatccatcaaagtaatccattatataaacaaactcaaagacaaaaaccacatgatcatctctttagatgcagaaaaagcattcgacaagatccaacccccattcataataaaactctttgaaagatcaggaattcaaggcccatacctaaccatgataaaagcaatctacagcaaaccagtagccatcatcaaagtaaatggtgagaagcttgaagcaatcccactaaaatcagggactagacaggctgtccactctctccatacctattcaacactgttcttgaagacctagccagagcaattcgacaacaaaaggagatcaaagggatacaaattggaaaagaggaagtcaaaatatcatgttttgcagatgatatgatagtatatatcagtgacgctaaaaattccaccagagaactcctaaacctgataaacagcttcggtgaaatagctggatataaaataaactcaaacaagtcaatggcctttctctacacaaagaataaacaggctgagaaagaaattagggaaacaacacccttctcaatagtcacaaatgatataaaatatcttggcgtgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatctctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatgctcatggattggcaggaacaacattgtaaaaatggctatcttgacaaaagcaatctacagattcaatgcaatcccaatcaaaattccaactcaattcttcaatgaattggaaagagcaatccgcaaattcgtctggaataacagaaaagctaggatagcaaaaactattctcaaggataaaagaacctctgatggaatcaccatgcctgacctaaagctttactacagagcaattgtgataaaaactgcatgctactggtatactgacagacaaatagaccaatggaataaaattgaagacccagaaataaacccacacacctatggccacttgatctttgacaagggagctaaaaccatccagtggaagaaagacagcattttcaacaaatggtgctggcacaactggttgttatgtagaagaatgtgaatctatccattcctgtctccttgtactaaggtcaaatctaagttgatcaaggaacttcacataaaaccagagacactgaaacttatagaggagaaagtgggaaaaagcctcgaagatacgggcataggggaaaaattcctgaatagaacagcaatagcttgtgctgtaagatcgagaatatgaccaatgggacctcatgaaactgcaaagcttctgcaaggcaaaatatactgtcaataagacaaaaaggccaccaacagatcaggaaaggatctttacctatcctaaatcagataggggactaatatccaatatatataaagaactgaagagggtggactccagaaaatcaaataaccccattaaaaattggggctcagaattgaacaaagaattctcactggaggaataccgaatggcagagaagcacctgacaaaaatgttcaagatccttaattatcagggaaatgcaaatcaaaacaaccctgagattccacctcacaccagtcaaaatggctaagatcagaaattcaggtgacagcagatgctggcaaggatgtggagaaagagaaacactcctccactgtttgtgggattgcaagcttgtacaactactctggaaatcagtctggcggttccttagaaaattggacatagtactaccggaggatcctgcaatacctcttctgggcatatatccagaagatgtcccaaccggtatgaaggacacatgctccactatgttcatagcagccttatttatagtagacagaagcatgaaagaacccagatgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatggaatactactcagctattaaaaagaatgaatttatgaaattcctaggcaaatggatggacctggagggcatcatcctgagcgaggtaacccaatcacaaaggaactcacacaatatgtactcactgataagtggatactagcccaaaacttagtatacccaagatataagatacaatttgccaaatgcatgaaactctagaagaatgaagaccaaagtgtggacactttgctccctcttagaattgggaacaaaacaccatggaaggagttatagagacaaagtttggagctgtgacaaaaggatggactatctagagactgccttatctagggatccaccccataatcaccttccaaacactgaaaccactgcatacactagcaagattttgctgaaaggacccagataaagctgtatcttgtgagactaggcaggggccacataagtggatgctcacagtcagctattgaatggatcacagggcccccaatggaggagctagagaaagtatccaaggagctaaagagatctgcaaccctgtaggtgcaacaacattatgaactaaccagtaccctggagctcttgactctagctacatatgtatcaaaagatggcctagttggccatcactggaaagagaggcccatcggacacacaaactttatgtgccccagtacaagggaatgccagggccaaaaaaatgagaatgagtgggtagggaattggtggggagggtatgggggacttttgggatagcattggaaatgtcattgaggaaaatacgtaataaataaataaaaaaT e rn5.chr14 99335412 51907 - 115151701 I a score=82470.000000 s mm10.chr5_JH584296_random 193105 1733 + 199368 GATAATTACAGTCTGGTAAGTTTCTATGTAAAACAGACACCCGATTCCTTGTAATTATGTATCCACAAGTACTTTTTGGATTGTCAAACATAggtctggagaaatg---tctcaataattaagagtactggctgctctttccaacaacctgagttcaattctagacaaccacctgacctacttacaactatctatacaaggttctgatgcctttttctgacatgtaagcatacatgcaactagaataggaatataacataaaatacatacagaaataaatgttgaaCATTGACAAACTCCTAATTACCTCTCACTCACTCATGGTACAGTAGTTCAAACTCTGAAGCCCAGAGCACTCTACAGTATTGCTCACCAACTGAACTCAATGGAAACACCTGAAACTCCACAGGCTCTCTTCAGAGACACACA------------ATCAACATCCCCATTTTAATTGA----------GTTCTA----TTTGTGAAATTGA-GTCATTTTTTAA----AGGACTTCTTTAGCTATGTGCATAGCGACATATGTATTATGTGTATTCATGCATGTGAAAGCCAAGATCCACATAGTCCAGAAAAGAGAGTCCTATCACCTGAAGTCTGAGTTC-----AAGAGTGACCTGATTATTAGCACTGAAACCAAACTTTGCTCCTATGCAAAAGCAGCATGTGCATTTAACCTGTGAGCAATCTCTCCCAAACTACGGGTTGCCTGTTTAAAGAATGtgaatgcatatttattgtgagcaaatttcaggtgagttcactggtcctaaggaacaaggctaggaaactggacattcatacagggagtcagaatgtaggggaagacagaaaggaggagcctaagagaggTTTGTTGTT---------TGTTTTGTCTTCCTCTGTGCCTTAGGCCAGCCTAGATGTCCA--TGTGTTCAACCATAGCTGATAACTTTACCCACCTTCCCAAGATT--TAATTGTGACATTCCTGGCATCAATGTGTTAATTTTGACTTCTCTCCAGAGGGCATTTGTGGCAGAGTCCTTAAATTTTGATATGTTTTTCTATTAAGACAATAACAAAGAT-CTTAAGCAAAGGACTCATGTTCCAAGTGTTCAATAAATACAGAGTAACAATAAATTATTTTATTGATAGTTTGCTATACAGAAAGGGGT-ATAATGACTAGGCAGAGGGAGATTCTTTTCTTTTGTTTTTATTACAACTAAAGCCTTAAAATACA---TTTTTTAAAAGTAAAGACTTTATGTAGATAAGTTACCTGCATATTATTGGACAACTTTACATATACTATAGGTACTTCATAGATTTTGGGACTCCATAGGAATAGGGCCCTAGAGACACGTGGC------ATGAAGACTTCATATAGAGGTTCCTGTTAGTAATCTCATTAAGGCATGACAAAAATATCAAGAGTTTAAAGCTAGAATGGAAAGCCTGTTTGCTTTGCTCTATGTTGTCTTCTTAACTTTAGGCATCTTTGATGGGTCCAAGGTGCTTTGTGGTCTGAATGTACTGGATAGTAACCATTTGTGACATTTATCTTCCTCCTTCAAAGAA--TTTGTCTATGTTGCTCACTTTAGTTTAAATGTTTTGTGCACATAACTGATCAGCCACACAAAAGTGTTACACATGTAGCCCAGGCAAGAGACAAGGGAAAGATGTGTCACGAATACTTTCATTTTATACATGCCATTTATCACCTAAAACTTACCTTTCTTCATAAAAAAACAGTGTCTTACCAATCCTGGACCCATTCAAC s rn5.chr14 99387319 1771 - 115151701 GATAATGCCAAACTGGTATGTTTTTATGAAAAACAGACACCAGGTTTCTTGTGATTATGTATCCATGAGTGCTTTTTACATTGTCAAACATggacctggaaggatgatggctcactaattaagactcctggctctcctttcagacaacctaagttcaatggtagacaaccatctgccaca-tcacaaccatct---tagcactctgataccttttctcctcatgaaagcatacagataaatagaacacaaatata-cagaaaattcataaaGAAATAAATGTTGTACCTTGACAAACTCCTCATTTCCTTTCACTCTCCCTTGGTGCAAGACCTCCAAGCCTAGAGACCAAAGAAAACTATGCTATTGCTGGCCAATTCAGCTCAGTGGACACACCTGAATCTCCACATGCTCTCTTCACAGAGCCACACAACTGCTACCGATCAACACACCTGTTATAATTAATTGGACCATTGTTTTACTTCTTTGTGAAATTGATGGAATTTTCTAATTTCAAGACTTTTTCAGCTACGTGTATATCTGAATGTGAATTATATAAGTTTGGTCATGAGAAAgtgaggattcacaaaagccagaaaagcaggttttattacatgaagactgagttccatttgagagtcacctgattataagctcagaaatcaaactttgatcctctgcaacagtagcatgtgctctaagcctgtgagcaatttctcTCAAACTATAGGTCATTTGTTTTAAGAATATGAAAGCGTGTTTACTGTGGACAAATGTTAGGTGAGTTCACTGGTCCCAAGGAATAAGGCCAGGTATCTGGACATACAGACAAAAAGACAGGTTGTAGGCGAAGAGAGAAAGAAGGAGCCTGAGAGAGGTTTCTTGTTCTTTTTTGTTCTTTTGTCTTCTTGTGCACCTTAGGGCAGCATAAATGTCCAGATGGGTCCCAACTTAGCTGATAACCTTATTAATCTTTCCAAGAGTATGAAATGTGATATTCCTGGCATCAATGTGTTTATTTTGGCTTCTCTCCACAGAGCATTTGTTG---AGTAATTAAATTTAGATCCATTATTCATTGTAGACAATAACAATGATATTTAAACAGAGAACCTATGATCTATGTGtttaataaatacaatgta-taataaattattttattGATAGTTCACTCTCCAGTAAGGAGTTATAATGAATAGTCTGAGGGAGAAC-----------TTTTTTTTACAACTCAAGATTTAGAATAAAATTCTTTTGTAAAGAAAATGCTTTATATAGTAGAGGGACCTGCATATTATTGGACA-CCTTACATACACTTTGGGTGCTACATATAGTTTGAGAGTCCATAGGAATAATGCTCTACAGTCATGTGGCTGTAGCATAGAGTGTGCATA----GGTTCCCGGTAGTAGTCTCATGGAGGCATGACAAAAAGATCAAGAGTAGAAAGTCAGAGTGGAAAGCCTGTTTCCTTTGTCCTGGGTTGTCTTCTTCCATTTAGGCATCTCTGAGGGGTGCAAGGTGCCTTGTGGTCTGAATGTACTGTATTTTCATCTTCCATGATCCATTTAATCCTACTTCATTGGAGCTATGTCTATGTTGCTTACTTTAGTTTAAATGTTTACTGCACTTAACTGAGCAGTGAAACAAGAGGGTTGTAAATGTAGCCGAGGAAAAGGACAAGGAAAAGAAGTATCAAGAAAACTTTTATTTTGTACATGGCAATT-TCACCCTGACATTAGCTTCACTCATGCAATACCAGTGTCTTTCC-ATTCTGAACCCATTCAAC i rn5.chr14 I 51907 T 89523 a score=1511.000000 s mm10.chr5_JH584296_random 194838 59 + 199368 CTTCTAGACCCTGACCCTGATAGTGATGTTGTTAACAGTCAAATACCCATGAGAGAGAT s rn5.chr14 99299567 59 - 115151701 TTTCCTGACCATAAACCTGGTACCAAGGTTGGTAACAATTGAAGGGgagagagagaaag i rn5.chr14 T 89523 I 63 a score=0.000000 s mm10.chr5_JH584296_random 194897 35 + 199368 CATCTAGGTTTATGAGTACACAAAAAAAGCATCTA e rn5.chr14 99299626 63 - 115151701 I a score=8837.000000 s mm10.chr5_JH584296_random 194932 206 + 199368 TATATACACTGTCTGGGCAGAAGCCACATATAAACGCCAAACTGTTTTTCTGAC--CACAATCCCCCTGTTATCAGATTCCATCGAAATGTTCCCCATGTCAAGCTCAGCCTTCAGGGTCCCAGTCACTGTAAATCTCTTTATTTTCAACCATATGGGAAGTGTCTGAAATCACAGTTTCTGAGCACTGCAGATTAAAGATGTGTTCC s rn5.chr14 99299689 206 - 115151701 TAGTTAGTCTGTGCGGGAAGAAGCCATGTATAAATGTCAAATTATGTTTCTGACTCCACAAATATCCCGTTCTCA-AGTCCATCTGAATGTTCCCCATTTCAAGCTCAGTGTCCAAGGTCCAAGTCTTTGTATGTGT-TTTGCTTCCAACAATATGTTTAGTGTCAGAAATCACAGGCTCTGAGTAACCTGGATGAGGGATGTGTCCC i rn5.chr14 I 63 I 89197 a score=51841.000000 s mm10.chr5_JH584296_random 195138 986 + 199368 AAGCCTGTCATTTATTCATATCCAGAAGTCCTGTATCTATGTTTACTGAAAACAAGAACAAAGTATAGGGTCCTGGTCATAGACACAGGGCTTACAACATTTGTGACAGCTATCTGTAGCAAAAGAGATGCTCTTGGGCTGCCTTATAGCTCTGAGAGTATACATGAGCTCCTGACAAAGTTGGACAAATCTTTCTACAGAGACATGACCCAACTCATTATAGCACTGCAGAGGGGCAGGGCATTGTTCCACATTCATCTTGCTCCAGTTGGCTGTGTGCTGTAAAAGCTCCTTCAGGGTGGACATGGAGAAGTCATTGTTGTAGAAGTTGATCTGGTTGAGGTGAGTGCATTGACTGAGGGCAGGTAGGAGGGCATTGATCTGGGAGTCCTTCATCCTACACCACTGAAAATCCAGAAACTCAAGAGTGTCTGCTACTTTTTGTAGGAGACCTCTCAGAGGCATAAGATCCAAAGCATATAAGATCATCCCTCTTATTTCCAGATGTTTTAATTTAAAGAGGTTGTGGGAGCAAGAAAAGAAATCAAAGTCTCTCTGTGAAATTAGGCATTGGGTGATGGAGAAGGTCTCGAAGGGAGTCATCAGGCACCTAGGGATAGAGGAGACCAGAGGGTTATTTCTGACAAGTAGTGTTGTAAAGGTTTGGCTGGGATGTACACAGAGGTAGAATAAACCAGGGGCCCCAAGCTCAGTTTGACAAAAGGATCAAGTACATCCTCTATGATGCTTCCTATTGG-ATCTGCTCAGTCATTCCAATCCCACAATTCATCCTTGGATCTCACACTCAAGCTGAAAACCAGTTCATCATTTAAGCCAAGAAAGCACACAGAAGAACTTCTAATCTAAGAAATTCCTGACAGGATTTTGATAAA----TTCTGTGGACTCATTGAATCTACATTCTATCATTCCTTCTGCAGTCATCCTTGCTCTAATTTACATCC-----------ACCTGTCCCATACACTCAGTGCTAC s rn5.chr14 99389092 980 - 115151701 AAGCCTGTTTTTTACTGAAATACAGAAGTTCTACTTCACAATTTACTGCCAGCAACAACAAAGCCTGGGCCCATTATGATAGACACAACGCTTACCACATGTATAACAGATTTCTGTAGCAAACGAGATGTTCTTGGGCTGCCTTATTGCCCTGTGTGTATCCGTGAGCTCACGACAAAGTTGGGAAAATCTTGCTACAGAAACTTGAGATGAGTCATCATAGCACTCCAGAGGGGCAGGGTATTGTTCCACATTCACCTGGCTCCAGTTGGCTGTGTGCTGCAACAGGTCCTTCAGAATGGGCATGGAGAACTTGTTGCTGTAGAACTTGACTGTGGTGAGCTGAGAGCAATTTCTGAGGGCAGGTAGGAGGGCATAAAGCTGAGGGTCCTTCATCCCACACCACTGCAAATTCAGAGTCTCAAGAGTGTCTGCCACTTTCTCTAGGAGACCTCTAAGGGGCATCACATCCAAACCATATAAGAGCACTCCTATCAATTCCAGATGTTTTAAGTGAAAGAGGCTCTGAGAGCAGGAGAAGGAATCCAAGTCGTTCTGTGAAATTATGTAGCAAGTAACTGAGAGGGTCTCCAAAGGCGTCATCAGGTACCTAGGGATAGAA-----CAGGGGATCAGTTCTGGCTAATGGTGTTGTAGATATTTGGCTGGAATGTACAGAGTGGTAGAGGGAACCAGTTGCCCCATGGTGAGTTTGACTAAATGGTCAAGGACATCATTTATGGTGCTTCCTATTGGAAATTGATCAGTCATGCCCACTCCACAGTTCATGTACTGACTTCACTCTCAAACTGAAAAGCGGTTCAGCTCATGAGTCCAGAAAGCACACAGAAGAACATCCATCCCAAGAAA--------AGCATCTCGATAAATGTTTGCTGTGTGCTCACTGAATCTGGA---------TCTTTCTGAATTCATCCTTGCTCTCATTTGCAGGCCAAGCTCTAAACCCTGTCCCAAGCACTCAGTGCTAC i rn5.chr14 I 89197 C 0 a score=631.000000 s mm10.chr5_JH584296_random 196124 4 + 199368 TTAG s rn5.chr14 99390072 4 - 115151701 TTGG i rn5.chr14 C 0 C 0 s ochPri2.scaffold_2607 7136 4 + 183216 TCAG i ochPri2.scaffold_2607 N 0 N 0 a score=5206.000000 s mm10.chr5_JH584296_random 196128 107 + 199368 GCTCAAAACGTTTCTCCCATTGGCACTTGGGGAAGATAGAAGGCTGTTCTCACAGATCTGAGCATATAGCTCATGTTCAAACTGTACTAATGAGTATCCTGACTCCT s rn5.chr14 99390076 107 - 115151701 GCTCTCAATGTTTTATCCAAGGGAATTGAGGGAAGATAGAAGGTTGTACTCTCAAATTTAAGCATTTAGCTCAGGTTCACCCTATGCTATTGAGTCCCCCAACTCCT i rn5.chr14 C 0 T 89197 a score=4528.000000 s mm10.chr5_JH584296_random 196235 120 + 199368 CTATACAC---TCCCCTTTCTCTTCCTTTTCCATTTGATTGGGCGGGCATGATTCCAGGAAGAATTACAACTCATTCTTACAAGATCTGTCCTACTCTTTACACCAAATCACTTCTCTACCCC s rn5.chr14 99300986 122 - 115151701 CATTACACATTTTCCTTTCCTGTTCCCTTACCATTTGAATGGGTGATCATGATTTGATGAAAAATTACAACACATCCTTACTCAATCTGACCTATTCTT-ACCACAATTGTCTTCTTTTACAC i rn5.chr14 T 89197 I 89243 a score=87922.000000 s mm10.chr5_JH584296_random 196355 1832 + 199368 ATGAGTTCTCATTTGAGATACTATTTTAACTTGTACTATTCCCCTTGTATATTTCAGTATACATGGAAAGAAGACACAACTTTCAGAGTCTTATGAATGTCTAAAT-TTTGTTCCTAGTGACTGTCAGGCATCATGGACCACGAATCTT------AAGATAGACAGATTTGCTTTTGTACCTGACCCAGCTCTCCGTTCTTGCTTACCCTGGAACCTGATTTA----GTCTCTTAGAAAATGGACAAGTTTCATGAAGATATCCTGGAGACAGTTGAATTGGGAAAATGGAGAAATAATCTTGTGAACACACTTGGCTTCTGTGGCACTTGTTATATTGATAATAGGGGAGGGATTCTTGTGGAGGGGTGCCAGGAAGACTTTTTGAAGATTTTTCATGTGCCCAAAGTAGGGAACAAAATGTGCCAGCTGTAACAGAGTCCAGTAAGCATTGAGTTCTAATTCTGTGATGTGCTCTGGATCAAAAACATCAAAGATTTCTCTGATAACTTGGTCTGGTGGATCCCAGATCTTCATCTTTGTACAGCAGAAATATAGGGACCCTGTTCTCTGCTTGGCCCAATTCAAGAAATATGCCTTTGATTTATTGAAGTGGGAACTGATTGACAGGTTGACTATGACCTTCAGAAGCTGCC---TCTGTGCATATCTCAGAAGGACCTTCACTATCTGCTTTTCATCCAATGTCTCTGCTTTACATTCACTGTCATTTGCATCAGCCCACATGTTTCAGAAGGCATGGTACATATTTCTCATGTCAAGAACCTGAAGTTTTGCCCTCCTGTGGTTGAAACAAATGAATGTTAGCAGACCCTGAATCATCTTTTGCTACATATATCTAAACTCAGCTCCCCTCCCTACTAAGGTGTTTGATTTTTTAAGCACCTGATATCCAAGGTGGACTCAGGTATGCTACAGAAGCTTTCCTGGACTTCATTACACTTGATTACTTTTCTTTCAGTAAGGTAACCATTATTTCTCCTTAGAGattaattaattattaattagaaaatttaattattattaCTAGTTGTGGGAAGGCCAGGGATAGGCTCATTCTACTGTAAGGCTAAATCTAATCTAGTCCATATTCAACTCTAATCCATATCCAACTTTCCTCAGTATATGTAAACAATAGCTTTCAAGAACCTTGTATCCCTACTTGATGATGTGATTAGAAGCATCTGAACCATTTAGTACAAAGCCAATCTCCCTGGCAATGTCTATTGTGTACTCCTCATGCTCCCTTATACAATACATGGATATTGCTTACCTGGGGTGAAACTCTCTTGTCAGTCTCATGTCTACTCCATCTAGCAGAGCTTGCAAGGTTTCTAGGTTAGGCTTCTTTATCAATGGTCCCACAGGGAGACAGGGGAAAGGCCAGGCTGCCACCATTGCCTTTAGGAGATTGGTGTGTCTGCCAGCAAAGACCTCTTTGAATAGTGCTGGGAAGACCACAGTAGGCAACTCCTCCAGAGAGGACTTGATCAAAGCTTCATGTGTCAGCAGAGTGC------------------GTGTGGGTGGGGTCTGACCACTCATCCTCTCAGGTCTTCAGTAAGAAGGCTCCTGGGGAAGCAGTTAG-AAAGAATATATATTCAAGACAAACTTTATAATATTCCTTCACCATCACATCAACCACTTAGCTTCTGAGTTACTGCCATGACAGTCATAAAGCCACCAATTTACCTCTTCATCCTAAACTGGTGGTGT----AAAGACTCTCAAACTGGCATCATGGGAATCTCTCTATTACTCTAATGGACACCTAATTTTGGAGTCAAAATATTTTTA-TTTGTTACTCTTTCTTTAAAAAAGGAAAGAATGAA s rn5.chr14 99390351 1821 - 115151701 aTGAGTGCTCATTTGAAACACTGATTTCACTTGTAAAATTAACCGGGTGTCACTCAGTATACATGAAAATAGGACATAAATC-CTGAGTCTTATGTGTCTCTGAATGTTTGTTCCTAGTGACTG-CTGACATCATACACCACTAATCCTTAAGATAAGAGAGACAGATTTGCTTTGGGAGCTGAACTAGCTGTTCATTCTTACTTACCTGAGGACTTGATTCATGTGATCTCTAAGAAAATGGCAGTAAAACATACTGAGATGCTGGAGACAATTGAACTTGGAGAACTGAGAAATAAACTTCTTGATACATGTGGCTTCTCTGTCTCCTGTTTCATTGCGATTAGAGGAGATTATCTTC---AGGGGTGCCAGGGAGACTTTGCGGAGATGTCTCATCTGTCCAAAGTAGGGAGCAAAATGTGCCAGCTCTAAAAGTGTCCACTCATTATGCAGTTCAAATTCTGTGATATGCTGTGGATCAAAAACTTTCAAGATCTCTCTGATAACATGGACTGGCAGATCCCAGATCGTCATCTTTGTACAGCAGAAATGTAGGGAGCCCTTTCTCTCCTGGGCCCACTTTAAGAAGCATGCTTGTTGCTCCTCAAGACAAGAAAAGATGGACAGTTCAACTATGACTTTCACACGTTGCCGCCTCAGTGCATATCTGGGAAAGACCTTCGCTACTTGCTTTTCCTCCAGGTTCTCTGCTGAATGGCTGCTGTCCTCTGCTCCAGTCCATATATTCCAGAAGTTATGGTGCTCATTTCTCAGATCGAGGACCTGTAGTTTTGTCCTCCTGTTGGTGAAACATATGAACCTCATGAGACTCTGAATCAGCTTTTAATACATATATCTAAACTCATCTCTCTCCTATTGAGAGGTATTC---TGTTTAAGTACCTGATATCCAAACTAGACTCAGGCATGCTCCAGATCCTTTCCCAGACTTCTGTTCACTTGACTATTTTTATTTCACTAAGGTAAACCT-----------------------ATTTTTAATTAGTCA-------CATTATTAGTGGTTGTGGGAATGCTAAGTATAGGCTCATTCTACTGTGAGGCTATATTTACTCAAGTCTATATTCAACTATAATCCATATTCAACTATGCTTAGTACAAGTAAA---TTGCTTTCAAGAACCATGTATCCCTGCATGATGATGAGATCAAAAATTTCTGATCCATGTATAACCAAGCCAACCACCTTGACAATCTCTACTGTGTAGTTCATGTGCTGTCTTATACAGTACATAGTTATTCCTTACTTTGGGTGAAACGTTCTTGTCAGTCGCATGTCTACTCCATCTAGCAGAGCCTTCATGGTTTCCCCATTAGGTGTCTTCATCAATGCCCCCACAGGTAGACAGGGAAAAGGCCAAGCTGCCACCATTTCCTTTATGAGGTTGATGTGTCTGCCCTCAAATGCCTCCTTGAACAGTGCTGGGAAGAGTATAGTAGGCAGCTCCCCAAGACAGGATATGGCCATGGCCTCATTTCTTAGCAGAGTCTGCCTTGCCAGCTTCTCAAGTGTGGGTGGGGTATGGCCACTCATCTTCTAAGGTCCTCAGTCAGAAAGCTCCTGGGGAAGGAGTCAGAAAAGAATGCACTTTCAAGAAAAAGTTTATAAAACTTCCTCACAATCACAGCAATGATGAAGC--------TACTGCTCTGGCAAGGGTAGAAACATCATTTTTCCTCTTCATCCTAAATTGGTCATGTAAAGAAAGACTCTCACACTGGCAATGTGGGAGATATTCGATCCATCAAATGGGTATATAATTTTCTGTTCAAAAGATTTTAAGTGTGACACTTCCATTTTAAAAAAAGTAAGAATgga i rn5.chr14 I 89243 N 0