This directory contains a dump of the UCSC genome annotation database for the Feb. 2003 release of the A. gambiae genome (anoGam1) from the International Anopheles Genome Project (version MOZ2). Files included in this directory (updated nightly): - *.sql files: the MySQL commands used to create the tables. To see descriptions of the tables underlying Genome Browser annotation tracks, select the table in the Table Browser: http://genome.ucsc.edu/cgi-bin/hgTables?db=anoGam1 and click the "describe table schema" button. There is also a "view table schema" link on the configuration page for each track. - *.txt.gz files: the database tables in a tab-delimited format compressed with gzip. ----------------------------------------------------------------- If you plan to download a large file or multiple files from this directory, we recommend that you use ftp rather than downloading the files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to the directory goldenPath/anoGam1/database/. To download multiple files, use the "mget" command: mget <filename1> <filename2> ... - or - mget -a (to download all the files in the directory) The A. gambiae sequence is made freely available by The International Anopheles Genome Project. All the annotations in this directory are freely available for public use.
Name Last modified Size Description
Parent Directory - xenoMrna.txt.gz 2020-08-20 19:42 118M chainDm6Link.txt.gz 2014-12-14 08:42 16M genscanPep.txt.gz 2004-08-09 19:13 7.6M xenoRefSeqAli.txt.gz 2020-08-20 20:23 6.6M xenoRefGene.txt.gz 2020-08-20 20:23 6.5M all_est.txt.gz 2016-06-12 06:05 6.1M xenoRefFlat.txt.gz 2020-08-20 20:23 5.8M ensPep.txt.gz 2004-08-09 19:12 3.3M all_mrna.txt.gz 2020-03-01 04:47 3.0M chainDm6.txt.gz 2014-12-14 08:42 2.2M netDm6.txt.gz 2014-12-14 08:42 1.8M chr2R_est.txt.gz 2016-06-12 06:05 1.8M estOrientInfo.txt.gz 2016-06-12 06:05 1.7M simpleRepeat.txt.gz 2004-08-09 19:15 1.6M blastDm2FB.txt.gz 2005-07-28 05:23 1.3M genscan.txt.gz 2005-01-09 04:31 1.3M chr2L_est.txt.gz 2016-06-12 06:05 1.3M chr3R_est.txt.gz 2016-06-12 06:05 1.2M anoEstNcl.txt.gz 2005-06-10 04:23 1.0M chr2R_mrna.txt.gz 2017-11-26 05:29 1.0M chr2R_intronEst.txt.gz 2016-06-12 06:05 958K geneid.txt.gz 2005-09-23 04:48 897K chr3L_est.txt.gz 2016-06-12 06:05 863K chrU_rmsk.txt.gz 2004-08-09 19:11 801K ensGene.txt.gz 2004-08-09 19:11 790K mrnaOrientInfo.txt.gz 2020-03-01 04:47 721K augustusGene.txt.gz 2015-07-26 10:05 713K chr2L_intronEst.txt.gz 2016-06-12 06:06 658K chr3R_mrna.txt.gz 2020-03-01 04:46 656K chr2R_rmsk.txt.gz 2004-08-09 19:10 651K chr3R_intronEst.txt.gz 2016-06-12 06:06 631K chr2L_mrna.txt.gz 2019-07-14 05:14 565K chr2L_rmsk.txt.gz 2004-08-09 19:10 564K chr3R_rmsk.txt.gz 2004-08-09 19:11 556K chrX_est.txt.gz 2016-06-12 06:05 540K anoEstTcl.txt.gz 2005-06-10 04:24 539K chr3L_intronEst.txt.gz 2016-06-12 06:05 462K chr3L_rmsk.txt.gz 2004-08-09 19:11 444K chrX_rmsk.txt.gz 2004-08-09 19:11 423K chr3L_mrna.txt.gz 2020-03-01 04:47 394K chrU_est.txt.gz 2016-06-12 06:05 339K chrX_intronEst.txt.gz 2016-06-12 06:06 248K chrU_mrna.txt.gz 2016-06-12 06:06 241K gbLoaded.txt.gz 2020-08-20 20:23 210K chrM_est.txt.gz 2016-06-12 06:05 207K gbDelete_tmp.txt.gz 2005-09-28 04:49 180K ensGtp.txt.gz 2004-08-09 19:12 156K chrX_mrna.txt.gz 2017-04-23 10:32 145K chrU_gold.txt.gz 2004-08-09 19:11 144K chrU_intronEst.txt.gz 2016-06-12 06:05 129K chrU_gap.txt.gz 2004-08-09 19:11 99K gcPercent.txt.gz 2004-10-24 04:18 85K microsat.txt.gz 2015-08-23 09:42 46K trackDb.txt.gz 2023-03-28 13:46 27K anoEstExpressed.txt.gz 2005-06-10 04:23 20K tableDescriptions.txt.gz 2024-11-30 02:03 5.1K tableList.txt.gz 2024-12-01 03:25 4.5K all_mrna.sql 2020-03-01 04:47 2.4K all_est.sql 2016-06-12 06:05 2.4K xenoMrna.sql 2020-08-20 19:42 2.4K chr3R_intronEst.sql 2016-06-12 06:06 2.4K chr3L_intronEst.sql 2016-06-12 06:05 2.4K chr2R_intronEst.sql 2016-06-12 06:05 2.4K chr2L_intronEst.sql 2016-06-12 06:06 2.4K chrX_intronEst.sql 2016-06-12 06:06 2.4K chrU_intronEst.sql 2016-06-12 06:05 2.4K chr3R_mrna.sql 2020-03-01 04:46 2.4K chr3L_mrna.sql 2020-03-01 04:47 2.4K chr2R_mrna.sql 2017-11-26 05:29 2.4K chr2L_mrna.sql 2019-07-14 05:14 2.4K chrX_mrna.sql 2017-04-23 10:32 2.4K chrU_mrna.sql 2016-06-12 06:06 2.4K chrM_mrna.sql 2016-06-12 06:05 2.4K chr3R_est.sql 2016-06-12 06:05 2.4K chr3L_est.sql 2016-06-12 06:05 2.4K chr2R_est.sql 2016-06-12 06:05 2.4K chr2L_est.sql 2016-06-12 06:05 2.4K chrX_est.sql 2016-06-12 06:05 2.4K chrU_est.sql 2016-06-12 06:05 2.4K chrM_est.sql 2016-06-12 06:05 2.4K chrM_intronEst.sql 2008-03-18 03:23 2.2K xenoRefSeqAli.sql 2020-08-20 20:23 2.1K netDm6.sql 2014-12-14 08:42 2.1K trackDb.sql 2023-03-28 13:46 2.1K xenoRefGene.sql 2020-08-20 20:23 2.0K augustusGene.sql 2015-07-26 10:05 1.9K mrnaOrientInfo.sql 2020-03-01 04:47 1.9K estOrientInfo.sql 2016-06-12 06:05 1.9K hgFindSpec.sql 2023-03-28 13:46 1.8K xenoRefFlat.sql 2020-08-20 20:23 1.7K chainDm6.sql 2014-12-14 08:42 1.7K gbLoaded.sql 2020-08-20 20:23 1.7K tableList.sql 2024-12-01 03:25 1.6K chainDm6Link.sql 2014-12-14 08:42 1.5K microsat.sql 2015-08-23 09:42 1.5K tableDescriptions.sql 2024-11-30 02:03 1.5K bigFiles.sql 2024-12-01 03:25 1.4K grp.sql 2014-03-02 03:37 1.4K blastDm2FB.sql 2013-10-01 12:48 1.3K simpleRepeat.sql 2013-10-01 12:48 1.1K chr3R_rmsk.sql 2013-10-01 12:48 1.0K chr3L_rmsk.sql 2013-10-01 12:48 1.0K chr2R_rmsk.sql 2013-10-01 12:48 1.0K chr2L_rmsk.sql 2013-10-01 12:48 1.0K chrX_rmsk.sql 2013-10-01 12:48 1.0K chrU_rmsk.sql 2013-10-01 12:48 1.0K chrM_rmsk.sql 2013-10-01 12:48 1.0K ensGene.sql 2013-10-01 12:48 1.0K geneid.sql 2013-10-01 12:48 1.0K chrM_rmsk.txt.gz 2004-08-09 19:11 1.0K anoEstTcl.sql 2013-10-01 12:48 946 anoEstNcl.sql 2013-10-01 12:48 946 hgFindSpec.txt.gz 2023-03-28 13:46 905 chr3R_gold.sql 2013-10-01 12:48 783 chr3L_gold.sql 2013-10-01 12:48 783 chr2R_gold.sql 2013-10-01 12:48 783 chr2L_gold.sql 2013-10-01 12:48 783 chrX_gold.sql 2013-10-01 12:48 781 chrU_gold.sql 2013-10-01 12:48 781 genscan.sql 2013-10-01 12:48 748 chr3R_gap.sql 2013-10-01 12:48 706 chr3L_gap.sql 2013-10-01 12:48 706 chr2R_gap.sql 2013-10-01 12:48 706 chr2L_gap.sql 2013-10-01 12:48 706 chrX_gap.sql 2013-10-01 12:48 704 chrU_gap.sql 2013-10-01 12:48 704 chrM_mrna.txt.gz 2016-06-12 06:05 665 chrM_gap.sql 2013-10-01 12:48 615 gcPercent.sql 2013-10-01 12:48 546 history.sql 2013-10-01 12:48 537 chr2R_gold.txt.gz 2004-08-09 19:10 489 chr3L_gold.txt.gz 2004-08-09 19:10 486 ensGtp.sql 2013-10-01 12:48 438 chromInfo.sql 2013-10-01 12:48 396 genscanPep.sql 2013-10-01 12:48 330 chr3L_gap.txt.gz 2004-08-09 19:10 327 gbDelete_tmp.sql 2013-10-01 12:48 326 chr2R_gap.txt.gz 2004-08-09 19:10 325 ensPep.sql 2013-10-01 12:48 322 history.txt.gz 2004-08-09 19:13 315 anoEstExpressed.sql 2013-10-01 12:48 307 chrX_gold.txt.gz 2004-08-09 19:11 273 chr2L_gold.txt.gz 2004-08-09 19:10 245 chr3R_gold.txt.gz 2004-08-09 19:11 235 grp.txt.gz 2014-03-02 03:37 223 chrX_gap.txt.gz 2004-08-09 19:11 194 chr3R_gap.txt.gz 2004-08-09 19:11 171 chr2L_gap.txt.gz 2004-08-09 19:10 171 chromInfo.txt.gz 2004-08-09 19:11 155 chrM_intronEst.txt.gz 2008-03-18 03:23 106 chrM_gap.txt.gz 2004-08-09 19:11 33 bigFiles.txt.gz 2024-12-01 03:25 33