This directory contains a dump of the UCSC genome annotation 
database for the May 2003 freeze of the C. elegans genome from 
WormBase (ftp://ftp.sanger.ac.uk/pub/wormbase/WS100/CHROMOSOMES/). 

Files included in this directory (updated nightly):

  - *.sql files: the MySQL commands used to create the tables.
    To see descriptions of the tables underlying Genome Browser annotation
    tracks, select the table in the Table Browser:
      http://genome.ucsc.edu/cgi-bin/hgTables?db=ce1
    and click the "describe table schema" button.  There is also a "view
    table schema" link on the configuration page for each track.

  - *.txt.gz files: the database tables in a tab-delimited format 
    compressed with gzip. 

-----------------------------------------------------------------
If you plan to download a large file or multiple files from this 
directory, we recommend that you use ftp rather than downloading the 
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, 
then go to the directory goldenPath/ceMay2003/database/. To download 
multiple files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

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All the tables in this directory are freely usable for any purpose 
except for the following:

   softberryGene.txt and softberryPep.txt -  Free for academic 
        and nonprofit use. Commercial users please contact
        Softberry Inc. at http://www.softberry.com.

The C. elegans sequence is made freely available to the community by the
Genome Sequencing Center at the WUSTL School of Medicine. Please see the
WUSTL data use policy at http://genome.wustl.edu/data.cgi for data use
restrictions and citation information.
      Name                        Last modified      Size  Description
Parent Directory - all_est.sql 2006-09-10 08:45 2.1K all_est.txt.gz 2006-09-10 08:45 7.2M all_mrna.sql 2013-10-01 12:48 1.3K all_mrna.txt.gz 2003-06-24 12:22 137K author.sql 2013-10-01 12:48 332 author.txt.gz 2003-06-24 12:22 30K cds.sql 2013-10-01 12:48 326 cds.txt.gz 2003-06-24 12:22 20K cell.sql 2013-10-01 12:48 328 cell.txt.gz 2003-06-24 12:22 44 chrIII_blastzCb1.sql 2013-10-01 12:48 1.3K chrIII_blastzCb1.txt.gz 2003-06-24 12:22 15M chrIII_blastzSelf.sql 2013-10-01 12:48 1.3K chrIII_blastzSelf.txt.gz 2003-06-24 12:24 59M chrIII_blatFugu.sql 2013-10-01 12:48 1.3K chrIII_blatFugu.txt.gz 2003-06-24 12:27 219K chrIII_cb1Chain.sql 2013-10-01 12:48 854 chrIII_cb1Chain.txt.gz 2003-06-24 12:27 5.5M chrIII_cb1ChainLink.sql 2013-10-01 12:48 577 chrIII_cb1ChainLink.txt.gz 2003-06-24 12:28 13M chrIII_chainSelf.sql 2013-10-01 12:48 856 chrIII_chainSelf.txt.gz 2003-06-24 12:29 22M chrIII_chainSelfLink.sql 2013-10-01 12:48 579 chrIII_chainSelfLink.txt.gz 2003-06-24 12:31 56M chrIII_est.sql 2013-10-01 12:48 1.3K chrIII_est.txt.gz 2003-06-24 12:32 1.1M chrIII_gap.sql 2013-10-01 12:48 696 chrIII_gap.txt.gz 2004-05-01 05:06 161 chrIII_gold.sql 2013-10-01 12:48 783 chrIII_gold.txt.gz 2003-06-24 12:32 6.9K chrIII_mrna.sql 2013-10-01 12:48 1.3K chrIII_mrna.txt.gz 2003-06-24 12:32 25K chrIII_rmsk.sql 2013-10-01 12:48 1.0K chrIII_rmsk.txt.gz 2003-06-24 12:32 370K chrIII_wabaCbr.sql 2013-10-01 12:48 568 chrIII_wabaCbr.txt.gz 2003-06-24 12:32 2.2M chrII_blastzCb1.sql 2013-10-01 12:48 1.3K chrII_blastzCb1.txt.gz 2003-06-24 12:32 13M chrII_blastzSelf.sql 2013-10-01 12:48 1.3K chrII_blastzSelf.txt.gz 2003-06-24 12:33 42M chrII_blatFugu.sql 2013-10-01 12:48 1.3K chrII_blatFugu.txt.gz 2003-06-24 12:33 172K chrII_cb1Chain.sql 2013-10-01 12:48 852 chrII_cb1Chain.txt.gz 2003-06-24 12:33 5.0M chrII_cb1ChainLink.sql 2013-10-01 12:48 575 chrII_cb1ChainLink.txt.gz 2003-06-24 12:34 12M chrII_chainSelf.sql 2013-10-01 12:48 854 chrII_chainSelf.txt.gz 2003-06-24 12:34 16M chrII_chainSelfLink.sql 2013-10-01 12:48 577 chrII_chainSelfLink.txt.gz 2003-06-24 12:35 40M chrII_est.sql 2013-10-01 12:48 1.3K chrII_est.txt.gz 2003-06-24 12:36 1.0M chrII_gap.sql 2013-10-01 12:48 694 chrII_gap.txt.gz 2004-05-01 05:06 93 chrII_gold.sql 2013-10-01 12:48 781 chrII_gold.txt.gz 2003-06-24 12:36 8.7K chrII_mrna.sql 2013-10-01 12:48 1.3K chrII_mrna.txt.gz 2003-06-24 12:36 17K chrII_rmsk.sql 2013-10-01 12:48 1.0K chrII_rmsk.txt.gz 2003-06-24 12:36 329K chrII_wabaCbr.sql 2013-10-01 12:48 566 chrII_wabaCbr.txt.gz 2003-06-24 12:36 1.6M chrIV_blastzCb1.sql 2013-10-01 12:48 1.3K chrIV_blastzCb1.txt.gz 2003-06-24 12:36 16M chrIV_blastzSelf.sql 2013-10-01 12:48 1.3K chrIV_blastzSelf.txt.gz 2003-06-24 12:37 41M chrIV_blatFugu.sql 2013-10-01 12:48 1.3K chrIV_blatFugu.txt.gz 2003-06-24 12:38 228K chrIV_cb1Chain.sql 2013-10-01 12:48 852 chrIV_cb1Chain.txt.gz 2003-06-24 12:38 5.6M chrIV_cb1ChainLink.sql 2013-10-01 12:48 575 chrIV_cb1ChainLink.txt.gz 2003-06-24 12:38 14M chrIV_chainSelf.sql 2013-10-01 12:48 854 chrIV_chainSelf.txt.gz 2003-06-24 12:38 16M chrIV_chainSelfLink.sql 2013-10-01 12:48 577 chrIV_chainSelfLink.txt.gz 2003-06-24 12:39 39M chrIV_est.sql 2013-10-01 12:48 1.3K chrIV_est.txt.gz 2003-06-24 12:40 1.0M chrIV_gap.sql 2013-10-01 12:48 694 chrIV_gap.txt.gz 2004-05-01 05:06 601 chrIV_gold.sql 2013-10-01 12:48 781 chrIV_gold.txt.gz 2003-06-24 12:40 8.7K chrIV_mrna.sql 2013-10-01 12:48 1.3K chrIV_mrna.txt.gz 2003-06-24 12:40 21K chrIV_rmsk.sql 2013-10-01 12:48 1.0K chrIV_rmsk.txt.gz 2003-06-24 12:40 358K chrIV_wabaCbr.sql 2013-10-01 12:48 566 chrIV_wabaCbr.txt.gz 2003-06-24 12:40 2.5M chrI_blastzCb1.sql 2013-10-01 12:48 1.3K chrI_blastzCb1.txt.gz 2003-06-24 12:40 12M chrI_blastzSelf.sql 2013-10-01 12:48 1.3K chrI_blastzSelf.txt.gz 2003-06-24 12:41 47M chrI_blatFugu.sql 2013-10-01 12:48 1.3K chrI_blatFugu.txt.gz 2003-06-24 12:42 214K chrI_cb1Chain.sql 2013-10-01 12:48 850 chrI_cb1Chain.txt.gz 2003-06-24 12:42 4.3M chrI_cb1ChainLink.sql 2013-10-01 12:48 573 chrI_cb1ChainLink.txt.gz 2003-06-24 12:42 10M chrI_chainSelf.sql 2013-10-01 12:48 852 chrI_chainSelf.txt.gz 2003-06-24 12:43 16M chrI_chainSelfLink.sql 2013-10-01 12:48 575 chrI_chainSelfLink.txt.gz 2003-06-24 12:44 44M chrI_est.sql 2013-10-01 12:48 1.3K chrI_est.txt.gz 2003-06-24 12:45 1.3M chrI_gap.sql 2013-10-01 12:48 692 chrI_gap.txt.gz 2004-05-01 05:06 82 chrI_gold.sql 2013-10-01 12:48 779 chrI_gold.txt.gz 2003-06-24 12:45 8.0K chrI_mrna.sql 2013-10-01 12:48 1.3K chrI_mrna.txt.gz 2003-06-24 12:45 26K chrI_rmsk.sql 2013-10-01 12:48 1.0K chrI_rmsk.txt.gz 2003-06-24 12:45 391K chrI_wabaCbr.sql 2013-10-01 12:48 564 chrI_wabaCbr.txt.gz 2003-06-24 12:45 1.5M chrM_blastzCb1.sql 2013-10-01 12:48 1.3K chrM_blastzCb1.txt.gz 2003-06-24 12:45 2.1K chrM_blastzSelf.sql 2013-10-01 12:48 1.3K chrM_blastzSelf.txt.gz 2003-06-24 12:45 137 chrM_blatFugu.sql 2013-10-01 12:48 1.3K chrM_blatFugu.txt.gz 2003-06-24 12:45 137 chrM_cb1Chain.sql 2013-10-01 12:48 850 chrM_cb1Chain.txt.gz 2003-06-24 12:45 391 chrM_cb1ChainLink.sql 2013-10-01 12:48 573 chrM_cb1ChainLink.txt.gz 2003-06-24 12:45 2.0K chrM_chainSelf.sql 2013-10-01 12:48 852 chrM_chainSelf.txt.gz 2003-06-24 12:45 120 chrM_chainSelfLink.sql 2013-10-01 12:48 575 chrM_chainSelfLink.txt.gz 2003-06-24 12:45 97 chrM_est.sql 2013-10-01 12:48 1.3K chrM_est.txt.gz 2003-06-24 12:45 36K chrM_gap.sql 2013-10-01 12:48 709 chrM_gap.txt.gz 2004-05-01 05:06 33 chrM_gold.sql 2013-10-01 12:48 786 chrM_gold.txt.gz 2004-05-01 05:06 64 chrM_mrna.sql 2013-10-01 12:48 1.3K chrM_mrna.txt.gz 2003-06-24 12:45 117 chrM_rmsk.sql 2013-10-01 12:48 1.0K chrM_rmsk.txt.gz 2003-06-24 12:45 662 chrM_wabaCbr.sql 2013-10-01 12:48 564 chrM_wabaCbr.txt.gz 2003-06-24 12:45 412 chrV_blastzCb1.sql 2013-10-01 12:48 1.3K chrV_blastzCb1.txt.gz 2003-06-24 12:45 18M chrV_blastzSelf.sql 2013-10-01 12:48 1.3K chrV_blastzSelf.txt.gz 2003-06-24 12:46 55M chrV_blatFugu.sql 2013-10-01 12:48 1.3K chrV_blatFugu.txt.gz 2003-06-24 12:48 223K chrV_cb1Chain.sql 2013-10-01 12:48 850 chrV_cb1Chain.txt.gz 2003-06-24 12:48 6.4M chrV_cb1ChainLink.sql 2013-10-01 12:48 573 chrV_cb1ChainLink.txt.gz 2003-06-24 12:48 15M chrV_chainSelf.sql 2013-10-01 12:48 852 chrV_chainSelf.txt.gz 2003-06-24 12:49 21M chrV_chainSelfLink.sql 2013-10-01 12:48 575 chrV_chainSelfLink.txt.gz 2003-06-24 12:50 50M chrV_est.sql 2013-10-01 12:48 1.3K chrV_est.txt.gz 2003-06-24 12:51 950K chrV_gap.sql 2013-10-01 12:48 685 chrV_gap.txt.gz 2003-06-24 12:51 33 chrV_gold.sql 2013-10-01 12:48 779 chrV_gold.txt.gz 2003-06-24 12:51 12K chrV_mrna.sql 2013-10-01 12:48 1.3K chrV_mrna.txt.gz 2003-06-24 12:51 20K chrV_rmsk.sql 2013-10-01 12:48 1.0K chrV_rmsk.txt.gz 2003-06-24 12:51 428K chrV_wabaCbr.sql 2013-10-01 12:48 564 chrV_wabaCbr.txt.gz 2003-06-24 12:51 1.8M chrX_blastzCb1.sql 2013-10-01 12:48 1.3K chrX_blastzCb1.txt.gz 2003-06-24 12:52 7.2M chrX_blastzSelf.sql 2013-10-01 12:48 1.3K chrX_blastzSelf.txt.gz 2003-06-24 12:53 22M chrX_blatFugu.sql 2013-10-01 12:48 1.3K chrX_blatFugu.txt.gz 2003-06-24 12:54 310K chrX_cb1Chain.sql 2013-10-01 12:48 850 chrX_cb1Chain.txt.gz 2003-06-24 12:54 2.2M chrX_cb1ChainLink.sql 2013-10-01 12:48 573 chrX_cb1ChainLink.txt.gz 2003-06-24 12:54 6.3M chrX_chainSelf.sql 2013-10-01 12:48 852 chrX_chainSelf.txt.gz 2003-06-24 12:55 11M chrX_chainSelfLink.sql 2013-10-01 12:48 575 chrX_chainSelfLink.txt.gz 2003-06-24 12:57 21M chrX_est.sql 2013-10-01 12:48 1.3K chrX_est.txt.gz 2003-06-24 12:57 825K chrX_gap.sql 2013-10-01 12:48 692 chrX_gap.txt.gz 2004-05-01 05:06 71 chrX_gold.sql 2013-10-01 12:48 779 chrX_gold.txt.gz 2003-06-24 12:57 11K chrX_mrna.sql 2013-10-01 12:48 1.3K chrX_mrna.txt.gz 2003-06-24 12:57 27K chrX_rmsk.sql 2013-10-01 12:48 1.0K chrX_rmsk.txt.gz 2003-06-24 12:58 263K chrX_wabaCbr.sql 2013-10-01 12:48 564 chrX_wabaCbr.txt.gz 2003-06-24 12:58 1.0M chromInfo.sql 2013-10-01 12:48 394 chromInfo.txt.gz 2003-06-24 12:58 143 description.sql 2013-10-01 12:48 342 description.txt.gz 2003-06-24 12:58 23K development.sql 2013-10-01 12:48 342 development.txt.gz 2003-06-24 12:58 318 extFile.sql 2013-10-01 12:48 443 extFile.txt.gz 2003-06-24 12:58 159 gbCdnaInfo.sql 2013-10-01 12:48 1.5K gbCdnaInfo.txt.gz 2004-09-28 10:04 1.8M gcPercent.sql 2013-10-01 12:48 544 gcPercent.txt.gz 2003-06-24 12:58 26K geneName.sql 2013-10-01 12:48 336 geneName.txt.gz 2003-06-24 12:58 101K genomicSuperDups.sql 2006-07-05 07:02 2.5K genomicSuperDups.txt.gz 2006-07-05 07:02 421K grp.sql 2013-10-01 12:48 358 grp.txt.gz 2004-10-22 04:25 204 hgFindSpec.sql 2013-10-01 12:48 825 hgFindSpec.txt.gz 2005-04-23 05:28 533 history.sql 2013-10-01 12:48 499 history.txt.gz 2003-06-24 12:58 271 keyword.sql 2013-10-01 12:48 334 keyword.txt.gz 2003-06-24 12:58 4.3K kimExpDistance.sql 2013-10-01 12:48 392 kimExpDistance.txt.gz 2003-10-30 06:58 118M library.sql 2013-10-01 12:48 334 library.txt.gz 2003-06-24 12:58 8.3K miRNA.sql 2013-10-01 12:48 776 miRNA.txt.gz 2004-03-20 05:05 2.1K mrnaClone.sql 2013-10-01 12:48 338 mrnaClone.txt.gz 2003-06-24 12:58 510K orfToGene.sql 2013-10-01 12:48 364 orfToGene.txt.gz 2003-10-09 20:19 98K organism.sql 2013-10-01 12:48 336 organism.txt.gz 2003-06-24 12:58 65 productName.sql 2013-10-01 12:48 342 productName.txt.gz 2003-06-24 12:58 117K refFlat.sql 2013-10-01 12:48 769 refFlat.txt.gz 2003-06-24 12:58 1.1M refGene.sql 2013-10-01 12:48 753 refGene.txt.gz 2004-05-20 05:15 1.1M refLink.sql 2013-10-01 12:48 802 refLink.txt.gz 2004-05-20 05:15 496K refMrna.sql 2013-10-01 12:48 329 refMrna.txt.gz 2004-05-20 05:15 7.1M refSeqAli.sql 2013-10-01 12:48 1.3K refSeqAli.txt.gz 2003-06-24 12:59 1.3M refSeqStatus.sql 2013-10-01 12:48 350 refSeqStatus.txt.gz 2004-06-23 04:28 69K sangerBlastTab.sql 2013-10-01 12:48 808 sangerBlastTab.txt.gz 2003-10-09 20:19 18M sangerCanonical.sql 2013-10-01 12:48 612 sangerCanonical.txt.gz 2003-10-30 06:55 340K sangerGene.sql 2013-10-01 12:48 824 sangerGene.txt.gz 2003-10-30 06:55 1.2M sangerIsoforms.sql 2013-10-01 12:48 405 sangerIsoforms.txt.gz 2003-10-09 20:19 102K sangerLinks.sql 2013-10-01 12:48 419 sangerLinks.txt.gz 2003-10-30 06:55 550K sangerPep.sql 2013-10-01 12:48 326 sangerPep.txt.gz 2003-09-25 08:55 4.8M sangerToKim.sql 2013-10-01 12:48 375 sangerToKim.txt.gz 2003-10-09 20:19 95K sangerToPfam.sql 2013-10-01 12:48 377 sangerToPfam.txt.gz 2004-04-17 05:03 69K sangerToRefSeq.sql 2013-10-01 12:48 381 sangerToRefSeq.txt.gz 2003-10-09 20:19 107K seq.sql 2013-10-01 12:48 588 seq.txt.gz 2003-06-24 12:59 2.7M sex.sql 2013-10-01 12:48 326 sex.txt.gz 2003-06-24 12:59 140 simpleRepeat.sql 2013-10-01 12:48 1.1K simpleRepeat.txt.gz 2003-06-24 12:59 822K softberryGene.sql 2013-10-01 12:48 752 softberryGene.txt.gz 2003-08-29 07:24 1.0M softberryHom.sql 2013-10-01 12:48 381 softberryHom.txt.gz 2003-08-29 07:24 352K softberryPep.sql 2013-10-01 12:48 332 softberryPep.txt.gz 2003-08-29 07:24 4.7M source.sql 2013-10-01 12:48 332 source.txt.gz 2003-06-24 12:59 83 tableDescriptions.sql 2008-05-18 03:15 1.2K tableDescriptions.txt.gz 2008-05-18 03:15 6.2K tissue.sql 2013-10-01 12:48 332 tissue.txt.gz 2003-06-24 12:59 132 trackDb.sql 2008-07-16 03:14 2.0K trackDb.txt.gz 2008-07-16 03:14 13K twinscan.sql 2013-10-01 12:48 755 twinscan.txt.gz 2004-05-05 05:06 958K twinscanPep.sql 2013-10-01 12:48 337 twinscanPep.txt.gz 2004-03-24 05:08 4.2M wabaCbr.sql 2013-10-01 12:48 825 wabaCbr.txt.gz 2003-06-24 13:02 260M