This directory contains the Aug. 2003 Drosophila pseudoobscura Freeze 1 assembly (dp2) from the Baylor College of Medicine HGSC Drosophila Genome Project. The annotations were contributed by UCSC and collaborators worldwide. Files included in this directory (updated nightly): - *.sql files: the MySQL commands used to create the tables. To see descriptions of the tables underlying Genome Browser annotation tracks, select the table in the Table Browser: http://genome.ucsc.edu/cgi-bin/hgTables?db=dp2 and click the "describe table schema" button. There is also a "view table schema" link on the configuration page for each track. - *.txt.gz files: the database tables in a tab-delimited format compressed with gzip. -------------------------------------------------------------- If you plan to download a large file or multiple files from this directory, we recommend you use ftp rather than downloading the files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to the directory goldenPath/dp2/database/. To download multiple files, use the "mget" command: mget <filename1> <filename2> ... - or - mget -a (to download all the files in the directory) All the annotations in this directory are freely available for public use.
Name Last modified Size Description
Parent Directory - all_est.sql 2016-06-05 10:02 2.1K all_est.txt.gz 2016-06-05 10:02 2.2M all_mrna.sql 2017-10-22 06:27 2.1K all_mrna.txt.gz 2017-10-22 06:27 9.2K augustusGene.sql 2015-07-26 12:13 1.9K augustusGene.txt.gz 2015-07-26 12:13 749K bigFiles.sql 2024-10-06 03:30 1.4K bigFiles.txt.gz 2024-10-06 03:30 33 blastDm1FB.sql 2013-10-01 12:48 1.3K blastDm1FB.txt.gz 2004-09-01 13:17 1.4M chainDm1.sql 2013-10-01 12:48 838 chainDm1.txt.gz 2004-09-01 13:17 2.8M chainDm1Link.sql 2013-10-01 12:48 561 chainDm1Link.txt.gz 2004-09-01 13:17 28M chromInfo.sql 2013-10-01 12:48 388 chromInfo.txt.gz 2004-09-01 13:17 9.2K estOrientInfo.sql 2016-06-05 10:02 1.8K estOrientInfo.txt.gz 2016-06-05 10:02 388K extFile.sql 2013-10-01 12:48 441 extFile.txt.gz 2004-09-01 13:17 74 gap.sql 2013-10-01 12:48 718 gap.txt.gz 2005-06-23 05:17 82K gbDelete_tmp.sql 2013-10-01 12:48 322 gbDelete_tmp.txt.gz 2005-09-27 05:01 180K gbLoaded.sql 2020-08-21 13:08 1.6K gbLoaded.txt.gz 2020-08-21 13:08 43K gcPercent.sql 2013-10-01 12:48 542 gcPercent.txt.gz 2004-09-01 13:18 36K geneMapper.sql 2013-10-01 12:48 750 geneMapper.txt.gz 2006-01-29 08:24 597K genscan.sql 2013-10-01 12:48 744 genscan.txt.gz 2005-01-09 04:35 693K genscanPep.sql 2013-10-01 12:48 326 genscanPep.txt.gz 2004-09-01 13:18 4.6M grp.sql 2014-03-02 03:40 1.4K grp.txt.gz 2014-03-02 03:40 223 hgFindSpec.sql 2023-03-28 13:48 1.8K hgFindSpec.txt.gz 2023-03-28 13:48 676 history.sql 2013-10-01 12:48 533 history.txt.gz 2004-09-01 13:18 333 intronEst.sql 2016-06-05 10:02 2.1K intronEst.txt.gz 2016-06-05 10:02 1.4M microsat.sql 2015-08-23 14:16 1.5K microsat.txt.gz 2015-08-23 14:16 9.4K mrnaOrientInfo.sql 2017-10-22 06:27 1.8K mrnaOrientInfo.txt.gz 2017-10-22 06:27 2.6K netDm1.sql 2013-10-01 12:48 1.3K netDm1.txt.gz 2004-09-01 13:19 7.1M rmsk.sql 2013-10-01 12:48 1.1K rmsk.txt.gz 2004-09-01 13:19 2.3M seq.sql 2013-10-01 12:48 587 seq.txt.gz 2004-09-01 13:19 213K simpleRepeat.sql 2013-10-01 12:48 1.1K simpleRepeat.txt.gz 2004-09-01 13:19 1.4M tableDescriptions.sql 2024-10-05 02:03 1.5K tableDescriptions.txt.gz 2024-10-05 02:03 4.6K tableList.sql 2024-10-06 03:30 1.6K tableList.txt.gz 2024-10-06 03:30 2.3K trackDb.sql 2023-03-28 13:48 2.1K trackDb.txt.gz 2023-03-28 13:48 13K twinscan.sql 2013-10-01 12:48 1.0K twinscan.txt.gz 2004-09-01 13:19 731K xenoMrna.sql 2016-02-21 13:45 2.4K xenoMrna.txt.gz 2016-02-21 13:45 109M xenoRefFlat.sql 2020-08-21 13:08 1.7K xenoRefFlat.txt.gz 2020-08-21 13:08 12M xenoRefGene.sql 2020-08-21 13:08 1.9K xenoRefGene.txt.gz 2020-08-21 13:08 13M xenoRefSeqAli.sql 2020-08-21 13:08 2.1K xenoRefSeqAli.txt.gz 2020-08-21 13:08 13M