This directory contains a dump of the annotation database for
the Release 1.0 assembly of the Drosophila simulans genome
(droSim1, Apr. 2005) produced by the Genome Sequencing Center
at the Washington University St. Louis School of Medicine. The
annotations were generated by UCSC and collaborators worldwide.
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=droSim1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
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If you plan to download a large file or multiple files from this
directory, we recommend you use ftp rather than downloading the
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu,
then go to the directory goldenPath/droSim1/database/. To download
multiple files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the files in this directory are freely available for public use.
Name Last modified Size Description
Parent Directory -
xenoRefSeqAli.txt.gz 09-Jul-2017 08:52 12M
xenoRefSeqAli.sql 09-Jul-2017 08:52 2.1K
xenoRefGene.txt.gz 09-Jul-2017 08:52 11M
xenoRefGene.sql 09-Jul-2017 08:52 1.9K
xenoRefFlat.txt.gz 09-Jul-2017 08:52 9.8M
xenoRefFlat.sql 09-Jul-2017 08:52 1.7K
xenoMrna.txt.gz 09-Jul-2017 08:53 123M
xenoMrna.sql 09-Jul-2017 08:52 2.1K
trackDb.txt.gz 26-Mar-2017 21:30 17K
trackDb.sql 26-Mar-2017 21:30 2.0K
tableList.txt.gz 23-Jul-2017 04:09 7.9K
tableList.sql 23-Jul-2017 04:09 1.5K
tableDescriptions.txt.gz 23-Jul-2017 04:09 3.9K
tableDescriptions.sql 23-Jul-2017 04:09 1.4K
simpleRepeat.txt.gz 10-Jun-2005 15:58 603K
simpleRepeat.sql 01-Oct-2013 12:48 1.1K
netDm6.txt.gz 14-Dec-2014 12:57 2.8M
netDm6.sql 14-Dec-2014 12:57 2.1K
mrnaOrientInfo.txt.gz 13-Jun-2017 16:37 3.1K
mrnaOrientInfo.sql 13-Jun-2017 16:37 1.8K
microsat.txt.gz 23-Aug-2015 15:16 1.0K
microsat.sql 23-Aug-2015 15:16 1.5K
history.txt.gz 10-Jun-2005 15:58 330
history.sql 01-Oct-2013 12:48 537
hgFindSpec.txt.gz 26-Mar-2017 21:24 585
hgFindSpec.sql 26-Mar-2017 21:24 1.7K
grp.txt.gz 02-Mar-2014 03:40 223
grp.sql 02-Mar-2014 03:40 1.4K
genscanPep.txt.gz 10-Jun-2005 15:58 4.3M
genscanPep.sql 01-Oct-2013 12:48 330
genscan.txt.gz 10-Jun-2005 15:58 689K
genscan.sql 01-Oct-2013 12:48 746
geneid.txt.gz 23-Sep-2005 04:49 731K
geneid.sql 01-Oct-2013 12:48 1.0K
gcPercent.txt.gz 10-Jun-2005 15:58 41K
gcPercent.sql 01-Oct-2013 12:48 546
gbLoaded.txt.gz 09-Jul-2017 08:52 8.9K
gbLoaded.sql 09-Jul-2017 08:52 1.6K
gbDelete_tmp.txt.gz 27-Sep-2005 05:01 180K
gbDelete_tmp.sql 01-Oct-2013 12:48 326
extFile.txt.gz 10-Jun-2005 15:57 313
extFile.sql 01-Oct-2013 12:48 445
estOrientInfo.txt.gz 18-Dec-2016 07:03 1.1M
estOrientInfo.sql 18-Dec-2016 07:03 1.8K
dmRefGene.txt.gz 10-Jun-2005 15:57 810K
dmRefGene.sql 01-Oct-2013 12:48 663
chromInfo.txt.gz 10-Jun-2005 15:57 220
chromInfo.sql 01-Oct-2013 12:48 396
chrYh_random_rmsk.txt.gz 10-Jun-2005 15:57 3.2K
chrYh_random_rmsk.sql 01-Oct-2013 12:48 1.1K
chrYh_random_mrna.txt.gz 18-Dec-2016 07:03 42
chrYh_random_mrna.sql 18-Dec-2016 07:03 2.1K
chrYh_random_intronEst.txt.gz 18-Dec-2016 07:03 47
chrYh_random_intronEst.sql 18-Dec-2016 07:03 2.1K
chrYh_random_gold.txt.gz 10-Jun-2005 15:57 491
chrYh_random_gold.sql 01-Oct-2013 12:48 797
chrYh_random_gap.txt.gz 10-Jun-2005 15:57 379
chrYh_random_gap.sql 01-Oct-2013 12:48 720
chrYh_random_est.txt.gz 18-Dec-2016 07:03 161
chrYh_random_est.sql 18-Dec-2016 07:03 2.1K
chrXh_random_rmsk.txt.gz 10-Jun-2005 15:57 2.1K
chrXh_random_rmsk.sql 01-Oct-2013 12:48 1.1K
chrXh_random_mrna.txt.gz 18-Dec-2016 07:03 42
chrXh_random_mrna.sql 18-Dec-2016 07:03 2.1K
chrXh_random_intronEst.txt.gz 18-Dec-2016 07:03 492
chrXh_random_intronEst.sql 18-Dec-2016 07:03 2.1K
chrXh_random_gold.txt.gz 10-Jun-2005 15:57 372
chrXh_random_gold.sql 01-Oct-2013 12:48 797
chrXh_random_gap.txt.gz 10-Jun-2005 15:57 300
chrXh_random_gap.sql 01-Oct-2013 12:48 720
chrXh_random_est.txt.gz 18-Dec-2016 07:03 1.3K
chrXh_random_est.sql 18-Dec-2016 07:03 2.1K
chrX_rmsk.txt.gz 10-Jun-2005 15:57 248K
chrX_rmsk.sql 01-Oct-2013 12:48 1.0K
chrX_random_rmsk.txt.gz 10-Jun-2005 15:57 75K
chrX_random_rmsk.sql 01-Oct-2013 12:48 1.1K
chrX_random_mrna.txt.gz 18-Dec-2016 07:03 627
chrX_random_mrna.sql 18-Dec-2016 07:03 2.1K
chrX_random_intronEst.txt.gz 18-Dec-2016 07:03 46K
chrX_random_intronEst.sql 18-Dec-2016 07:03 2.1K
chrX_random_gold.txt.gz 10-Jun-2005 15:57 35K
chrX_random_gold.sql 01-Oct-2013 12:48 795
chrX_random_gap.txt.gz 10-Jun-2005 15:57 20K
chrX_random_gap.sql 01-Oct-2013 12:48 718
chrX_random_est.txt.gz 18-Dec-2016 07:03 108K
chrX_random_est.sql 18-Dec-2016 07:03 2.1K
chrX_mrna.txt.gz 18-Dec-2016 07:03 1.2K
chrX_mrna.sql 18-Dec-2016 07:03 2.1K
chrX_intronEst.txt.gz 18-Dec-2016 07:03 148K
chrX_intronEst.sql 18-Dec-2016 07:03 2.1K
chrX_gold.txt.gz 10-Jun-2005 15:57 99K
chrX_gold.sql 01-Oct-2013 12:48 781
chrX_gap.txt.gz 10-Jun-2005 15:57 30K
chrX_gap.sql 01-Oct-2013 12:48 704
chrX_est.txt.gz 18-Dec-2016 07:03 326K
chrX_est.sql 18-Dec-2016 07:03 2.1K
chrU_rmsk.txt.gz 10-Jun-2005 15:57 533K
chrU_rmsk.sql 01-Oct-2013 12:48 1.0K
chrU_mrna.txt.gz 18-Dec-2016 07:03 786
chrU_mrna.sql 18-Dec-2016 07:03 2.1K
chrU_intronEst.txt.gz 18-Dec-2016 07:03 23K
chrU_intronEst.sql 18-Dec-2016 07:03 2.1K
chrU_gold.txt.gz 10-Jun-2005 15:57 136K
chrU_gold.sql 01-Oct-2013 12:48 781
chrU_gap.txt.gz 10-Jun-2005 15:57 94K
chrU_gap.sql 01-Oct-2013 12:48 704
chrU_est.txt.gz 18-Dec-2016 07:03 111K
chrU_est.sql 18-Dec-2016 07:03 2.1K
chrM_rmsk.txt.gz 10-Jun-2005 15:56 1.0K
chrM_rmsk.sql 01-Oct-2013 12:48 1.0K
chrM_mrna.txt.gz 18-Dec-2016 07:03 34
chrM_mrna.sql 18-Dec-2016 07:03 2.1K
chrM_intronEst.txt.gz 18-Dec-2016 07:03 39
chrM_intronEst.sql 18-Dec-2016 07:03 2.1K
chrM_gap.txt.gz 10-Jun-2005 15:56 33
chrM_gap.sql 01-Oct-2013 12:48 615
chrM_est.txt.gz 18-Dec-2016 07:03 28K
chrM_est.sql 18-Dec-2016 07:03 2.1K
chr4_rmsk.txt.gz 10-Jun-2005 15:56 25K
chr4_rmsk.sql 01-Oct-2013 12:48 1.0K
chr4_random_rmsk.txt.gz 10-Jun-2005 15:56 3.0K
chr4_random_rmsk.sql 01-Oct-2013 12:48 1.1K
chr4_random_mrna.txt.gz 18-Dec-2016 07:03 41
chr4_random_mrna.sql 18-Dec-2016 07:03 2.1K
chr4_random_intronEst.txt.gz 18-Dec-2016 07:03 1.0K
chr4_random_intronEst.sql 18-Dec-2016 07:03 2.1K
chr4_random_gold.txt.gz 10-Jun-2005 15:56 952
chr4_random_gold.sql 01-Oct-2013 12:48 795
chr4_random_gap.txt.gz 10-Jun-2005 15:56 456
chr4_random_gap.sql 01-Oct-2013 12:48 718
chr4_random_est.txt.gz 18-Dec-2016 07:03 1.8K
chr4_random_est.sql 18-Dec-2016 07:03 2.1K
chr4_mrna.txt.gz 18-Dec-2016 07:03 34
chr4_mrna.sql 18-Dec-2016 07:03 2.1K
chr4_intronEst.txt.gz 18-Dec-2016 07:03 15K
chr4_intronEst.sql 18-Dec-2016 07:03 2.1K
chr4_gold.txt.gz 10-Jun-2005 15:56 5.4K
chr4_gold.sql 01-Oct-2013 12:48 781
chr4_gap.txt.gz 10-Jun-2005 15:56 1.9K
chr4_gap.sql 01-Oct-2013 12:48 704
chr4_est.txt.gz 18-Dec-2016 07:03 26K
chr4_est.sql 18-Dec-2016 07:03 2.1K
chr3h_random_rmsk.txt.gz 10-Jun-2005 15:56 51K
chr3h_random_rmsk.sql 01-Oct-2013 12:48 1.1K
chr3h_random_mrna.txt.gz 18-Dec-2016 07:03 42
chr3h_random_mrna.sql 18-Dec-2016 07:03 2.1K
chr3h_random_intronEst.txt.gz 18-Dec-2016 07:03 9.0K
chr3h_random_intronEst.sql 18-Dec-2016 07:03 2.1K
chr3h_random_gold.txt.gz 10-Jun-2005 15:56 5.1K
chr3h_random_gold.sql 01-Oct-2013 12:48 797
chr3h_random_gap.txt.gz 10-Jun-2005 15:56 3.5K
chr3h_random_gap.sql 01-Oct-2013 12:48 720
chr3h_random_est.txt.gz 18-Dec-2016 07:03 12K
chr3h_random_est.sql 18-Dec-2016 07:03 2.1K
chr3R_rmsk.txt.gz 10-Jun-2005 15:56 264K
chr3R_rmsk.sql 01-Oct-2013 12:48 1.0K
chr3R_random_rmsk.txt.gz 10-Jun-2005 15:56 13K
chr3R_random_rmsk.sql 01-Oct-2013 12:48 1.1K
chr3R_random_mrna.txt.gz 18-Dec-2016 07:03 42
chr3R_random_mrna.sql 18-Dec-2016 07:03 2.1K
chr3R_random_intronEst.txt.gz 18-Dec-2016 07:03 13K
chr3R_random_intronEst.sql 18-Dec-2016 07:03 2.1K
chr3R_random_gold.txt.gz 10-Jun-2005 15:56 7.8K
chr3R_random_gold.sql 01-Oct-2013 12:48 797
chr3R_random_gap.txt.gz 10-Jun-2005 15:56 4.7K
chr3R_random_gap.sql 01-Oct-2013 12:48 720
chr3R_random_est.txt.gz 18-Dec-2016 07:03 33K
chr3R_random_est.sql 18-Dec-2016 07:03 2.1K
chr3R_mrna.txt.gz 18-Dec-2016 07:03 1.9K
chr3R_mrna.sql 18-Dec-2016 07:03 2.1K
chr3R_intronEst.txt.gz 18-Dec-2016 07:03 446K
chr3R_intronEst.sql 18-Dec-2016 07:03 2.1K
chr3R_gold.txt.gz 10-Jun-2005 15:56 104K
chr3R_gold.sql 01-Oct-2013 12:48 783
chr3R_gap.txt.gz 10-Jun-2005 15:56 25K
chr3R_gap.sql 01-Oct-2013 12:48 706
chr3R_est.txt.gz 18-Dec-2016 07:03 823K
chr3R_est.sql 18-Dec-2016 07:03 2.1K
chr3L_rmsk.txt.gz 10-Jun-2005 15:56 250K
chr3L_rmsk.sql 01-Oct-2013 12:48 1.0K
chr3L_random_rmsk.txt.gz 10-Jun-2005 15:56 10K
chr3L_random_rmsk.sql 01-Oct-2013 12:48 1.1K
chr3L_random_mrna.txt.gz 18-Dec-2016 07:03 175
chr3L_random_mrna.sql 18-Dec-2016 07:03 2.1K
chr3L_random_intronEst.txt.gz 18-Dec-2016 07:03 7.3K
chr3L_random_intronEst.sql 18-Dec-2016 07:03 2.1K
chr3L_random_gold.txt.gz 10-Jun-2005 15:56 6.4K
chr3L_random_gold.sql 01-Oct-2013 12:48 797
chr3L_random_gap.txt.gz 10-Jun-2005 15:56 3.7K
chr3L_random_gap.sql 01-Oct-2013 12:48 720
chr3L_random_est.txt.gz 18-Dec-2016 07:03 17K
chr3L_random_est.sql 18-Dec-2016 07:03 2.1K
chr3L_mrna.txt.gz 18-Dec-2016 07:03 1.5K
chr3L_mrna.sql 18-Dec-2016 07:03 2.1K
chr3L_intronEst.txt.gz 18-Dec-2016 07:03 317K
chr3L_intronEst.sql 18-Dec-2016 07:03 2.1K
chr3L_gold.txt.gz 10-Jun-2005 15:56 88K
chr3L_gold.sql 01-Oct-2013 12:48 783
chr3L_gap.txt.gz 10-Jun-2005 15:56 23K
chr3L_gap.sql 01-Oct-2013 12:48 706
chr3L_est.txt.gz 18-Dec-2016 07:03 625K
chr3L_est.sql 18-Dec-2016 07:03 2.1K
chr2h_random_rmsk.txt.gz 10-Jun-2005 15:56 109K
chr2h_random_rmsk.sql 01-Oct-2013 12:48 1.1K
chr2h_random_mrna.txt.gz 18-Dec-2016 07:03 244
chr2h_random_mrna.sql 18-Dec-2016 07:03 2.1K
chr2h_random_intronEst.txt.gz 18-Dec-2016 07:03 15K
chr2h_random_intronEst.sql 18-Dec-2016 07:03 2.1K
chr2h_random_gold.txt.gz 10-Jun-2005 15:56 11K
chr2h_random_gold.sql 01-Oct-2013 12:48 797
chr2h_random_gap.txt.gz 10-Jun-2005 15:56 7.1K
chr2h_random_gap.sql 01-Oct-2013 12:48 720
chr2h_random_est.txt.gz 18-Dec-2016 07:03 24K
chr2h_random_est.sql 18-Dec-2016 07:03 2.1K
chr2R_rmsk.txt.gz 10-Jun-2005 15:56 198K
chr2R_rmsk.sql 01-Oct-2013 12:48 1.0K
chr2R_random_rmsk.txt.gz 10-Jun-2005 15:56 37K
chr2R_random_rmsk.sql 01-Oct-2013 12:48 1.1K
chr2R_random_mrna.txt.gz 18-Dec-2016 07:02 191
chr2R_random_mrna.sql 18-Dec-2016 07:02 2.1K
chr2R_random_intronEst.txt.gz 18-Dec-2016 07:03 25K
chr2R_random_intronEst.sql 18-Dec-2016 07:03 2.1K
chr2R_random_gold.txt.gz 10-Jun-2005 15:56 17K
chr2R_random_gold.sql 01-Oct-2013 12:48 797
chr2R_random_gap.txt.gz 10-Jun-2005 15:56 10K
chr2R_random_gap.sql 01-Oct-2013 12:48 720
chr2R_random_est.txt.gz 18-Dec-2016 07:03 60K
chr2R_random_est.sql 18-Dec-2016 07:03 2.1K
chr2R_mrna.txt.gz 13-Jun-2017 16:36 1.8K
chr2R_mrna.sql 13-Jun-2017 16:36 2.1K
chr2R_intronEst.txt.gz 18-Dec-2016 07:03 396K
chr2R_intronEst.sql 18-Dec-2016 07:03 2.1K
chr2R_gold.txt.gz 10-Jun-2005 15:56 80K
chr2R_gold.sql 01-Oct-2013 12:48 783
chr2R_gap.txt.gz 10-Jun-2005 15:56 21K
chr2R_gap.sql 01-Oct-2013 12:48 706
chr2R_est.txt.gz 18-Dec-2016 07:03 752K
chr2R_est.sql 18-Dec-2016 07:03 2.1K
chr2L_rmsk.txt.gz 10-Jun-2005 15:56 224K
chr2L_rmsk.sql 01-Oct-2013 12:48 1.0K
chr2L_random_rmsk.txt.gz 10-Jun-2005 15:56 8.6K
chr2L_random_rmsk.sql 01-Oct-2013 12:48 1.1K
chr2L_random_mrna.txt.gz 18-Dec-2016 07:03 42
chr2L_random_mrna.sql 18-Dec-2016 07:03 2.1K
chr2L_random_intronEst.txt.gz 18-Dec-2016 07:03 6.7K
chr2L_random_intronEst.sql 18-Dec-2016 07:03 2.1K
chr2L_random_gold.txt.gz 10-Jun-2005 15:56 4.8K
chr2L_random_gold.sql 01-Oct-2013 12:48 797
chr2L_random_gap.txt.gz 10-Jun-2005 15:56 3.0K
chr2L_random_gap.sql 01-Oct-2013 12:48 720
chr2L_random_est.txt.gz 18-Dec-2016 07:03 14K
chr2L_random_est.sql 18-Dec-2016 07:03 2.1K
chr2L_mrna.txt.gz 18-Dec-2016 07:02 1.7K
chr2L_mrna.sql 18-Dec-2016 07:02 2.1K
chr2L_intronEst.txt.gz 18-Dec-2016 07:03 360K
chr2L_intronEst.sql 18-Dec-2016 07:03 2.1K
chr2L_gold.txt.gz 10-Jun-2005 15:56 81K
chr2L_gold.sql 01-Oct-2013 12:48 783
chr2L_gap.txt.gz 10-Jun-2005 15:56 22K
chr2L_gap.sql 01-Oct-2013 12:48 706
chr2L_est.txt.gz 18-Dec-2016 07:03 679K
chr2L_est.sql 18-Dec-2016 07:03 2.1K
chainDm6Link.txt.gz 14-Dec-2014 12:57 56M
chainDm6Link.sql 14-Dec-2014 12:57 1.5K
chainDm6.txt.gz 14-Dec-2014 12:57 11M
chainDm6.sql 14-Dec-2014 12:57 1.7K
blastDm2FB.txt.gz 28-Jul-2005 05:23 900K
blastDm2FB.sql 01-Oct-2013 12:48 1.3K
bigFiles.txt.gz 23-Jul-2017 04:09 33
bigFiles.sql 23-Jul-2017 04:09 1.4K
augustusGene.txt.gz 26-Jul-2015 13:01 743K
augustusGene.sql 26-Jul-2015 13:01 1.9K
all_mrna.txt.gz 13-Jun-2017 16:36 9.6K
all_mrna.sql 13-Jun-2017 16:36 2.1K
all_est.txt.gz 18-Dec-2016 07:03 3.6M
all_est.sql 18-Dec-2016 07:03 2.1K