This directory contains reciprocal-best netted chains for mm10-danRer11.

 - mm10.danRer11.rbest.net.gz: mm10-referenced recip.best net to danRer11.
 - mm10.danRer11.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from mm10 to danRer11 through the recip.best net.

 - danRer11.mm10.rbest.net.gz: danRer11-referenced recip.best net.
 - danRer11.mm10.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.mm10.danRer11.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                         Last modified      Size  Description
Parent Directory - axtRBestNet/ 2017-06-13 18:24 - md5sum.txt 2017-06-13 09:25 248 danRer11.mm10.rbest.chain.gz 2017-06-13 09:25 3.1M mm10.danRer11.rbest.chain.gz 2017-06-13 09:25 3.1M mm10.danRer11.rbest.net.gz 2017-06-13 09:25 4.0M danRer11.mm10.rbest.net.gz 2017-06-13 09:25 4.1M