This directory contains compressed multiple alignments of the
following assemblies to the mouse genome (mm6, Mar. 2005):
- rat (rn3, Jun. 2003)
- human (hg17, May 2004)
- dog (canFam2, May. 2005)
- cow (bosTau1, Sep. 2004)
- opossum (monDom1, Oct. 2004)
- chicken (galGal2, Feb. 2004)
- frog (xenTro1, Oct. 2004)
- zebrafish (danRer3, May. 2005)
- Tetraodon (tetNig1, Feb. 2004)
Files included in this directory:
- chr*.maf.gz files: each contain all the alignments to that
particular mouse chromosome.
For a description of multiple alignment format (MAF), see
http://genome.ucsc.edu/goldenPath/help/maf.html.
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If you plan to download a large file or multiple files from this
directory, we recommend that you use ftp rather than downloading the
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu,
then go to the directory goldenPath/mm6/multiz10way. To download
multiple files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the files in this directory are freely usable for any
purpose. For data use restrictions regarding the individual
genome assemblies, see http://genome.ucsc.edu/goldenPath/credits.html.
Name Last modified Size Description
Parent Directory -
chr1.maf.gz 05-Dec-2005 19:50 196M
chr1_random.maf.gz 05-Dec-2005 16:34 1.1M
chr2.maf.gz 05-Dec-2005 20:05 202M
chr3.maf.gz 05-Dec-2005 18:49 157M
chr3_random.maf.gz 05-Dec-2005 16:35 2.9M
chr4.maf.gz 05-Dec-2005 18:52 158M
chr5.maf.gz 05-Dec-2005 18:36 149M
chr5_random.maf.gz 05-Dec-2005 16:34 1.7M
chr6.maf.gz 05-Dec-2005 18:37 151M
chr6_random.maf.gz 05-Dec-2005 16:34 1.1M
chr7.maf.gz 05-Dec-2005 18:17 134M
chr7_random.maf.gz 05-Dec-2005 16:34 2.6M
chr8.maf.gz 05-Dec-2005 18:10 129M
chr8_random.maf.gz 05-Dec-2005 16:34 1.6M
chr9.maf.gz 05-Dec-2005 18:18 133M
chr9_random.maf.gz 05-Dec-2005 16:34 358K
chr10.maf.gz 05-Dec-2005 18:17 133M
chr10_random.maf.gz 05-Dec-2005 16:34 462K
chr11.maf.gz 05-Dec-2005 18:27 137M
chr12.maf.gz 05-Dec-2005 17:57 117M
chr12_random.maf.gz 05-Dec-2005 16:35 2.7M
chr13.maf.gz 05-Dec-2005 17:50 113M
chr13_random.maf.gz 05-Dec-2005 16:35 3.0M
chr14.maf.gz 05-Dec-2005 17:59 120M
chr14_random.maf.gz 05-Dec-2005 16:34 1.4M
chr15.maf.gz 05-Dec-2005 17:43 105M
chr15_random.maf.gz 05-Dec-2005 16:34 778K
chr16.maf.gz 05-Dec-2005 17:37 98M
chr16_random.maf.gz 05-Dec-2005 16:34 1.4M
chr17.maf.gz 05-Dec-2005 17:29 90M
chr17_random.maf.gz 05-Dec-2005 16:34 1.2M
chr18.maf.gz 05-Dec-2005 17:33 93M
chr18_random.maf.gz 05-Dec-2005 16:34 744K
chr19.maf.gz 05-Dec-2005 17:14 67M
chr19_random.maf.gz 05-Dec-2005 16:34 631K
chrM.maf.gz 05-Dec-2005 16:33 61K
chrUn_random.maf.gz 05-Dec-2005 16:41 22M
chrX.maf.gz 05-Dec-2005 18:00 124M
chrY.maf.gz 05-Dec-2005 16:34 950K
chrY_random.maf.gz 05-Dec-2005 16:36 12M