This directory contains a dump of the UCSC genome annotation database for
the Feb. 2007 assembly of the P. pacificus genome
(priPac1, Washington University School of Medicine GSC
	Pristionchus pacificus 5.0).
The annotations were generated by UCSC and collaborators worldwide.

This assembly was produced by the Genome Sequencing Center at the
Washington University School of Medicine in St. Louis.
For more information on the P. pacificus genome, see the project website:
http://genome.wustl.edu/genome.cgi?GENOME=Pristionchus+pacificus+var.+california


Files included in this directory (updated nightly):

  - *.sql files:  the MySQL commands used to create the tables

  - *.txt.gz files: the database tables in a tab-delimited format
    compressed with gzip.

To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
  http://genome.ucsc.edu/cgi-bin/hgTables?db=priPac1
and click the "describe table schema" button.  There is also a "view
table schema" link on the configuration page for each track.

---------------------------------------------------------------
If you plan to download a large file or multiple files from this 
directory, we recommend you use ftp rather than downloading the files 
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to 
the directory goldenPath/priPac1/database/. To download multiple 
files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

The P. pacificus sequence is made freely available to the community by the
Genome Sequencing Center, Washington University School of Medicine, with
the following understanding:

1. The data may be freely downloaded, used in analyses, and repackaged in
   databases.

2. Users are free to use the data in scientific papers analyzing these data
   if the providers of these data are properly acknowledged.  See
   http://genome.ucsc.edu/goldenPath/credits.html for credit information.

3. See also: http://genome.wustl.edu/data.cgi

4. Any redistribution of the data should carry this notice.
      Name                          Last modified      Size  Description
Parent Directory - xenoRefSeqAli.txt.gz 2020-09-01 08:22 11M xenoRefSeqAli.sql 2020-09-01 08:22 2.1K xenoRefGene.txt.gz 2020-09-01 08:22 10M xenoRefGene.sql 2020-09-01 08:22 2.0K xenoRefFlat.txt.gz 2020-09-01 08:22 9.1M xenoRefFlat.sql 2020-09-01 08:22 1.7K xenoMrna.txt.gz 2016-02-21 22:47 80M xenoMrna.sql 2016-02-21 22:47 2.3K trackDb.txt.gz 2023-03-28 13:52 24K trackDb.sql 2023-03-28 13:52 2.1K tableList.txt.gz 2024-05-19 03:15 2.8K tableList.sql 2024-05-19 03:15 1.6K tableDescriptions.txt.gz 2024-05-18 02:03 5.0K tableDescriptions.sql 2024-05-18 02:03 1.5K tRNAs.txt.gz 2012-04-16 04:27 35K tRNAs.sql 2012-04-16 04:27 1.7K simpleRepeat.txt.gz 2007-08-03 16:10 859K simpleRepeat.sql 2007-08-03 16:10 2.0K quality.txt.gz 2007-08-03 16:10 2.9M quality.sql 2007-08-03 16:10 1.7K netCe6.txt.gz 2008-08-01 03:30 1.3M netCe6.sql 2008-08-01 03:30 2.2K netCb3.txt.gz 2007-08-03 16:10 1.4M netCb3.sql 2007-08-03 16:10 2.2K netCaeRem2.txt.gz 2007-08-03 16:10 1.5M netCaeRem2.sql 2007-08-03 16:10 2.2K netCaePb1.txt.gz 2007-08-03 16:10 2.1M netCaePb1.sql 2007-08-03 16:10 2.2K mrnaOrientInfo.txt.gz 2017-01-02 03:16 1.8K mrnaOrientInfo.sql 2017-01-02 03:16 1.8K microsat.txt.gz 2015-08-24 00:34 8.7K microsat.sql 2015-08-24 00:34 1.5K intronEst.txt.gz 2016-05-15 11:17 1.2M intronEst.sql 2016-05-15 11:17 2.1K history.txt.gz 2007-08-03 16:09 506 history.sql 2007-08-03 16:09 1.4K hgFindSpec.txt.gz 2023-03-28 13:52 631 hgFindSpec.sql 2023-03-28 13:52 1.8K grp.txt.gz 2014-03-02 04:14 208 grp.sql 2014-03-02 04:14 1.4K gc5Base.txt.gz 2007-08-03 16:09 708K gc5Base.sql 2007-08-03 16:09 1.7K gbLoaded.txt.gz 2020-09-01 08:22 43K gbLoaded.sql 2020-09-01 08:22 1.6K estOrientInfo.txt.gz 2016-05-15 11:17 450K estOrientInfo.sql 2016-05-15 11:17 1.8K ctgPos2.txt.gz 2007-08-03 16:08 256K ctgPos2.sql 2007-08-03 16:08 1.4K chromInfo.txt.gz 2007-08-03 16:08 70 chromInfo.sql 2007-08-03 16:08 1.2K chrUn_rmsk.txt.gz 2007-08-03 16:08 1.0M chrUn_rmsk.sql 2007-08-03 16:08 1.9K chrUn_gold.txt.gz 2007-08-03 16:08 83K chrUn_gold.sql 2007-08-03 16:08 1.6K chrUn_gap.txt.gz 2007-08-03 16:08 246K chrUn_gap.sql 2007-08-03 16:08 1.5K chrUn_chainCe6Link.txt.gz 2008-08-01 03:30 2.9M chrUn_chainCe6Link.sql 2008-08-01 03:30 1.4K chrUn_chainCe6.txt.gz 2008-08-01 03:30 876K chrUn_chainCe6.sql 2008-08-01 03:29 1.7K chrUn_chainCb3Link.txt.gz 2007-08-03 16:07 4.1M chrUn_chainCb3Link.sql 2007-08-03 16:07 1.4K chrUn_chainCb3.txt.gz 2007-08-03 16:07 1.4M chrUn_chainCb3.sql 2007-08-03 16:07 1.7K chrUn_chainCaeRem2Link.txt.gz 2007-08-03 16:07 8.9M chrUn_chainCaeRem2Link.sql 2007-08-03 16:07 1.4K chrUn_chainCaeRem2.txt.gz 2007-08-03 16:07 3.2M chrUn_chainCaeRem2.sql 2007-08-03 16:07 1.7K chrUn_chainCaePb1Link.txt.gz 2007-08-03 16:07 56M chrUn_chainCaePb1Link.sql 2007-08-03 16:06 1.4K chrUn_chainCaePb1.txt.gz 2007-08-03 16:06 31M chrUn_chainCaePb1.sql 2007-08-03 16:05 1.7K blastCe6SG.txt.gz 2008-08-20 03:18 1.1M blastCe6SG.sql 2008-08-20 03:18 2.1K bigFiles.txt.gz 2024-05-19 03:15 33 bigFiles.sql 2024-05-19 03:15 1.4K augustusGene.txt.gz 2015-07-26 17:21 3.2M augustusGene.sql 2015-07-26 17:21 1.9K all_mrna.txt.gz 2017-01-02 03:16 8.8K all_mrna.sql 2017-01-02 03:16 2.1K all_est.txt.gz 2016-05-15 11:17 1.6M all_est.sql 2016-05-15 11:17 2.1K