This directory contains a dump of the UCSC genome annotation database for the Saccharomyces cerevisiae sequence dated 1 Oct. 2003 in the Saccharomyces Genome Database (http://www.yeastgenome.org/). Files included in this directory (updated nightly): - *.sql files: the MySQL commands used to create the tables. To see descriptions of the tables underlying Genome Browser annotation tracks, select the table in the Table Browser: http://genome.ucsc.edu/cgi-bin/hgTables?db=sacCer1 and click the "describe table schema" button. There is also a "view table schema" link on the configuration page for each track. - *.txt.gz files: the database tables in a tab-delimited format compressed with gzip. ------------------------------------------------------------------ If you plan to download a large file or multiple files from this directory, we recommend that you use ftp rather than downloading the files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to the directory goldenPath/sacCer1/database. To download multiple files, use the "mget" command: mget <filename1> <filename2> ... - or - mget -a (to download all the files in the directory) All the annotations in this directory are freely available for public use.
Name Last modified Size Description
Parent Directory - all_est.sql 2016-05-15 11:28 2.1K all_est.txt.gz 2016-05-15 11:28 961K all_mrna.sql 2020-05-09 02:10 2.1K all_mrna.txt.gz 2020-05-09 02:10 44K augustusGene.sql 2015-07-26 17:28 1.9K augustusGene.txt.gz 2015-07-26 17:28 107K bigFiles.sql 2024-10-13 03:30 1.4K bigFiles.txt.gz 2024-10-13 03:30 33 blastHg16KG.sql 2013-10-01 12:48 1.3K blastHg16KG.txt.gz 2004-09-28 17:12 270K choExpDistance.sql 2013-10-01 12:48 403 choExpDistance.txt.gz 2004-01-14 17:03 34M chr1_est.sql 2016-05-15 11:28 2.1K chr1_est.txt.gz 2016-05-15 11:28 11K chr1_intronEst.sql 2016-05-15 11:28 2.1K chr1_intronEst.txt.gz 2016-05-15 11:28 1.1K chr1_mrna.sql 2020-05-09 02:10 2.1K chr1_mrna.txt.gz 2020-05-09 02:10 1.0K chr2_est.sql 2016-05-15 11:29 2.1K chr2_est.txt.gz 2016-05-15 11:29 71K chr2_intronEst.sql 2016-05-15 11:29 2.1K chr2_intronEst.txt.gz 2016-05-15 11:29 9.3K chr2_mrna.sql 2020-05-09 02:10 2.1K chr2_mrna.txt.gz 2020-05-09 02:10 3.2K chr3_est.sql 2016-05-15 11:28 2.1K chr3_est.txt.gz 2016-05-15 11:28 32K chr3_intronEst.sql 2016-05-15 11:28 2.1K chr3_intronEst.txt.gz 2016-05-15 11:28 1.5K chr3_mrna.sql 2020-05-09 02:10 2.1K chr3_mrna.txt.gz 2020-05-09 02:10 1.1K chr4_est.sql 2016-05-15 11:28 2.1K chr4_est.txt.gz 2016-05-15 11:28 149K chr4_intronEst.sql 2016-05-15 11:28 2.1K chr4_intronEst.txt.gz 2016-05-15 11:28 12K chr4_mrna.sql 2020-05-09 02:10 2.1K chr4_mrna.txt.gz 2020-05-09 02:10 5.5K chr5_est.sql 2016-05-15 11:28 2.1K chr5_est.txt.gz 2016-05-15 11:28 53K chr5_intronEst.sql 2016-05-15 11:28 2.1K chr5_intronEst.txt.gz 2016-05-15 11:28 3.3K chr5_mrna.sql 2020-05-09 02:10 2.1K chr5_mrna.txt.gz 2020-05-09 02:10 2.6K chr6_est.sql 2016-05-15 11:28 2.1K chr6_est.txt.gz 2016-05-15 11:28 30K chr6_intronEst.sql 2016-05-15 11:28 2.1K chr6_intronEst.txt.gz 2016-05-15 11:28 2.9K chr6_mrna.sql 2020-05-09 02:10 2.1K chr6_mrna.txt.gz 2020-05-09 02:10 1.1K chr7_est.sql 2016-05-15 11:29 2.1K chr7_est.txt.gz 2016-05-15 11:29 83K chr7_intronEst.sql 2016-05-15 11:29 2.1K chr7_intronEst.txt.gz 2016-05-15 11:29 8.3K chr7_mrna.sql 2020-05-09 02:10 2.1K chr7_mrna.txt.gz 2020-05-09 02:10 4.4K chr8_est.sql 2016-05-15 11:28 2.1K chr8_est.txt.gz 2016-05-15 11:28 32K chr8_intronEst.sql 2016-05-15 11:28 2.1K chr8_intronEst.txt.gz 2016-05-15 11:28 3.6K chr8_mrna.sql 2020-05-09 02:10 2.1K chr8_mrna.txt.gz 2020-05-09 02:10 1.8K chr9_est.sql 2016-05-15 11:28 2.1K chr9_est.txt.gz 2016-05-15 11:28 24K chr9_intronEst.sql 2016-05-15 11:28 2.1K chr9_intronEst.txt.gz 2016-05-15 11:28 2.6K chr9_mrna.sql 2020-05-09 02:10 2.1K chr9_mrna.txt.gz 2020-05-09 02:10 1.5K chr10_est.sql 2016-05-15 11:28 2.1K chr10_est.txt.gz 2016-05-15 11:28 50K chr10_intronEst.sql 2016-05-15 11:28 2.1K chr10_intronEst.txt.gz 2016-05-15 11:28 3.2K chr10_mrna.sql 2020-05-09 02:09 2.1K chr10_mrna.txt.gz 2020-05-09 02:09 3.4K chr11_est.sql 2016-05-15 11:28 2.1K chr11_est.txt.gz 2016-05-15 11:28 49K chr11_intronEst.sql 2016-05-15 11:28 2.1K chr11_intronEst.txt.gz 2016-05-15 11:28 3.2K chr11_mrna.sql 2020-05-09 02:09 2.1K chr11_mrna.txt.gz 2020-05-09 02:09 2.5K chr12_est.sql 2016-05-15 11:28 2.1K chr12_est.txt.gz 2016-05-15 11:28 81K chr12_intronEst.sql 2016-05-15 11:28 2.1K chr12_intronEst.txt.gz 2016-05-15 11:28 5.7K chr12_mrna.sql 2020-05-09 02:09 2.1K chr12_mrna.txt.gz 2020-05-09 02:09 4.6K chr13_est.sql 2016-05-15 11:28 2.1K chr13_est.txt.gz 2016-05-15 11:28 70K chr13_intronEst.sql 2016-05-15 11:28 2.1K chr13_intronEst.txt.gz 2016-05-15 11:28 5.5K chr13_mrna.sql 2020-05-09 02:09 2.1K chr13_mrna.txt.gz 2020-05-09 02:09 3.4K chr14_est.sql 2016-05-15 11:28 2.1K chr14_est.txt.gz 2016-05-15 11:28 46K chr14_intronEst.sql 2016-05-15 11:28 2.1K chr14_intronEst.txt.gz 2016-05-15 11:28 2.4K chr14_mrna.sql 2020-05-09 02:09 2.1K chr14_mrna.txt.gz 2020-05-09 02:09 2.8K chr15_est.sql 2016-05-15 11:28 2.1K chr15_est.txt.gz 2016-05-15 11:29 101K chr15_intronEst.sql 2016-05-15 11:29 2.1K chr15_intronEst.txt.gz 2016-05-15 11:29 5.3K chr15_mrna.sql 2020-05-09 02:09 2.1K chr15_mrna.txt.gz 2020-05-09 02:09 3.2K chr16_est.sql 2016-05-15 11:28 2.1K chr16_est.txt.gz 2016-05-15 11:28 84K chr16_intronEst.sql 2016-05-15 11:28 2.1K chr16_intronEst.txt.gz 2016-05-15 11:28 6.6K chr16_mrna.sql 2020-05-09 02:10 2.1K chr16_mrna.txt.gz 2020-05-09 02:10 3.1K chrM_est.sql 2016-05-15 11:28 2.1K chrM_est.txt.gz 2016-05-15 11:28 33 chrM_intronEst.sql 2016-05-15 11:29 2.1K chrM_intronEst.txt.gz 2016-05-15 11:29 39 chrM_mrna.sql 2020-05-09 02:10 2.1K chrM_mrna.txt.gz 2020-05-09 02:10 860 chromInfo.sql 2013-10-01 12:48 405 chromInfo.txt.gz 2004-01-14 17:03 218 dmBlastTab.sql 2008-11-03 03:18 1.6K dmBlastTab.txt.gz 2008-11-03 03:18 52K drBlastTab.sql 2013-10-01 12:48 811 drBlastTab.txt.gz 2004-01-14 17:03 83K ensGene.sql 2008-04-19 03:11 1.9K ensGene.txt.gz 2008-04-19 03:11 150K ensGtp.sql 2008-04-19 03:11 1.3K ensGtp.txt.gz 2008-04-19 03:11 29K ensPep.sql 2008-04-19 03:11 1.1K ensPep.txt.gz 2008-04-19 03:11 1.7M esRegGeneToModule.sql 2013-10-01 12:48 381 esRegGeneToModule.txt.gz 2004-09-28 17:12 9.1K esRegGeneToMotif.sql 2013-10-01 12:48 656 esRegGeneToMotif.txt.gz 2004-09-28 17:12 37K esRegMotif.sql 2013-10-01 12:48 452 esRegMotif.txt.gz 2004-09-28 17:12 17K esRegUpstreamRegion.sql 2013-10-01 12:48 598 esRegUpstreamRegion.txt.gz 2004-09-28 17:12 19K estOrientInfo.sql 2016-05-15 11:29 1.8K estOrientInfo.txt.gz 2016-05-15 11:29 303K extFile.sql 2013-10-01 12:48 445 extFile.txt.gz 2004-09-13 06:09 1.5K gbLoaded.sql 2020-09-01 20:04 1.6K gbLoaded.txt.gz 2020-09-01 20:04 43K gcPercent.sql 2013-10-01 12:48 555 gcPercent.txt.gz 2004-01-14 17:04 2.8K growthCondition.sql 2011-09-12 00:03 1.3K growthCondition.txt.gz 2011-09-12 00:03 685 grp.sql 2014-03-02 04:14 1.4K grp.txt.gz 2014-03-02 04:14 218 hgBlastTab.sql 2009-08-19 15:45 1.8K hgBlastTab.txt.gz 2009-08-19 15:45 59K hgFindSpec.sql 2023-03-28 13:53 1.8K hgFindSpec.txt.gz 2023-03-28 13:53 894 history.sql 2013-10-01 12:48 537 history.txt.gz 2004-09-13 06:09 584 mmBlastTab.sql 2007-10-20 17:54 1.6K mmBlastTab.txt.gz 2007-10-20 17:54 58K mrnaOrientInfo.sql 2020-05-09 02:10 1.8K mrnaOrientInfo.txt.gz 2020-05-09 02:10 18K multizYeast.sql 2013-10-01 12:48 671 multizYeast.txt.gz 2004-01-14 17:04 501K oreganno.sql 2016-05-15 11:29 1.5K oreganno.txt.gz 2016-05-15 11:29 83K oregannoAttr.sql 2016-05-15 11:29 1.4K oregannoAttr.txt.gz 2016-05-15 11:29 118K oregannoLink.sql 2016-05-15 11:29 1.4K oregannoLink.txt.gz 2016-05-15 11:29 83K phastCons.sql 2013-10-01 12:48 895 phastCons.txt.gz 2004-09-30 17:31 305K phastConsElements.sql 2013-10-01 12:48 655 phastConsElements.txt.gz 2004-09-30 17:31 380K protHomolog.sql 2013-10-01 12:48 621 protHomolog.txt.gz 2005-01-12 09:45 3.2M rnBlastTab.sql 2006-07-22 13:14 1.6K rnBlastTab.txt.gz 2006-07-22 13:14 68K sacBay_pwMaf.sql 2013-10-01 12:48 662 sacBay_pwMaf.txt.gz 2004-09-13 06:09 46K sacCas_pwMaf.sql 2013-10-01 12:48 662 sacCas_pwMaf.txt.gz 2004-09-13 06:09 77K sacKlu_pwMaf.sql 2013-10-01 12:48 662 sacKlu_pwMaf.txt.gz 2004-09-13 06:09 112K sacKud_pwMaf.sql 2013-10-01 12:48 662 sacKud_pwMaf.txt.gz 2004-09-13 06:09 63K sacMik_pwMaf.sql 2013-10-01 12:48 662 sacMik_pwMaf.txt.gz 2004-09-13 06:09 56K sacPar_pwMaf.sql 2013-10-01 12:48 662 sacPar_pwMaf.txt.gz 2004-09-13 06:09 34K samSubdir.sql 2013-10-01 12:48 345 samSubdir.txt.gz 2005-01-12 09:45 14K sgdAbundance.sql 2013-10-01 12:48 394 sgdAbundance.txt.gz 2004-01-14 17:04 19K sgdBlastTab.sql 2013-10-01 12:48 813 sgdBlastTab.txt.gz 2004-01-14 17:04 1.0M sgdCanonical.sql 2013-10-01 12:48 616 sgdCanonical.txt.gz 2004-01-14 17:04 89K sgdClone.sql 2013-10-01 12:48 571 sgdClone.txt.gz 2004-01-14 17:04 16K sgdDescription.sql 2013-10-01 12:48 391 sgdDescription.txt.gz 2004-01-14 17:04 139K sgdGene.sql 2013-10-01 12:48 833 sgdGene.txt.gz 2004-01-14 17:04 112K sgdIsoforms.sql 2013-10-01 12:48 409 sgdIsoforms.txt.gz 2004-01-14 17:04 27K sgdLocalization.sql 2013-10-01 12:48 387 sgdLocalization.txt.gz 2004-01-14 17:04 19K sgdOther.sql 2013-10-01 12:48 594 sgdOther.txt.gz 2004-01-14 17:04 24K sgdOtherDescription.sql 2013-10-01 12:48 401 sgdOtherDescription.txt.gz 2004-01-14 17:04 13K sgdPep.sql 2013-10-01 12:48 331 sgdPep.txt.gz 2004-01-14 17:04 1.6M sgdToName.sql 2007-03-23 10:42 1.2K sgdToName.txt.gz 2007-03-23 10:42 36K sgdToPfam.sql 2013-10-01 12:48 375 sgdToPfam.txt.gz 2004-04-17 05:21 22K sgdToSgd.sql 2013-10-01 12:48 374 sgdToSgd.txt.gz 2004-01-14 17:04 28K sgdToSwissProt.sql 2013-10-01 12:48 379 sgdToSwissProt.txt.gz 2004-01-14 17:04 32K simpleRepeat.sql 2013-10-01 12:48 1.1K simpleRepeat.txt.gz 2004-01-14 17:04 33K tableDescriptions.sql 2024-10-12 02:03 1.5K tableDescriptions.txt.gz 2024-10-12 02:03 6.9K tableList.sql 2024-10-13 03:30 1.6K tableList.txt.gz 2024-10-13 03:30 6.3K trackDb.sql 2023-03-28 13:53 2.1K trackDb.txt.gz 2023-03-28 13:53 21K transRegCode.sql 2013-10-01 12:48 663 transRegCode.txt.gz 2004-12-22 21:39 1.4M transRegCodeCondition.sql 2013-11-10 22:13 1.5K transRegCodeCondition.txt.gz 2013-11-10 22:13 1.2K transRegCodeMotif.sql 2013-10-01 12:48 471 transRegCodeMotif.txt.gz 2004-12-22 21:39 6.3K transRegCodeProbe.sql 2013-10-01 12:48 638 transRegCodeProbe.txt.gz 2004-12-22 21:39 138K uwFootprintsMappability.sql 2009-04-26 11:34 1.3K uwFootprintsMappability.txt.gz 2009-04-26 11:34 99K uwFootprintsPrints.sql 2009-04-26 11:35 1.4K uwFootprintsPrints.txt.gz 2009-04-26 11:35 52K uwFootprintsTagCounts.sql 2009-04-26 11:34 1.8K uwFootprintsTagCounts.txt.gz 2009-04-26 11:35 34M xenoRefFlat.sql 2020-09-01 20:04 1.7K xenoRefFlat.txt.gz 2020-09-01 20:04 960K xenoRefGene.sql 2020-09-01 20:04 2.0K xenoRefGene.txt.gz 2020-09-01 20:04 1.1M xenoRefSeqAli.sql 2020-09-01 20:04 2.1K xenoRefSeqAli.txt.gz 2020-09-01 20:04 1.1M yeastP2P.sql 2013-10-01 12:48 359 yeastP2P.txt.gz 2005-06-16 05:00 27M