[DIR] Parent Directory

This directory contains data generated by the Myers/HudsonAlpha lab as part of the ENCODE project. This is Release 2 of this track. Release notes are included in the track description. Further information is available in the Common Cell Cnv track description.

Data is RESTRICTED FROM USE in publication until the restriction date noted for the given data file.

There are two files within this directory that contain information about the downloads:

  • files.txt which is a tab-separated file with the name and metadata for each download.
  • md5sum.txt which is a list of the md5sum output for each download.
    • RESTRICTED
    until    		  FileSizeSubmitted  Details
      2009-08-20wgEncodeHudsonalphaCnvRegionsGM12878V2.bed.gz  7.0K  2008-11-20  dataType=Genotype; cell=GM12878; expId=273; subId=449; dataVersion=ENCODE July 2009 Freeze; dateResubmitted=2009-07-24; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed
      2009-08-20wgEncodeHudsonalphaCnvSignalGM12878.bedGraph4.gz  6.3K  2008-11-20  dataType=Genotype; cell=GM12878; expId=273; subId=449; dataVersion=ENCODE July 2009 Freeze; dateResubmitted=2009-07-24; grant=Myers; lab=HudsonAlpha; view=Signal; type=bedGraph4
      2009-08-20wgEncodeHudsonalphaCnvRegionsHepG2V2.bed.gz  6.6K  2008-11-20  dataType=Genotype; cell=HepG2; expId=274; subId=449; dataVersion=ENCODE July 2009 Freeze; dateResubmitted=2009-07-24; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed
      2009-08-20wgEncodeHudsonalphaCnvSignalHepG2.bedGraph4.gz  5.9K  2008-11-20  dataType=Genotype; cell=HepG2; expId=274; subId=449; dataVersion=ENCODE July 2009 Freeze; dateResubmitted=2009-07-24; grant=Myers; lab=HudsonAlpha; view=Signal; type=bedGraph4
      2009-08-20wgEncodeHudsonalphaCnvRegionsK562V2.bed.gz  8.1K  2008-11-20  dataType=Genotype; cell=K562; expId=275; subId=449; dataVersion=ENCODE July 2009 Freeze; dateResubmitted=2009-07-24; grant=Myers; lab=HudsonAlpha; view=Regions; type=bed
      2009-08-20wgEncodeHudsonalphaCnvSignalK562.bedGraph4.gz  7.3K  2008-11-20  dataType=Genotype; cell=K562; expId=275; subId=449; dataVersion=ENCODE July 2009 Freeze; dateResubmitted=2009-07-24; grant=Myers; lab=HudsonAlpha; view=Signal; type=bedGraph4
    6 files