This directory contains reciprocal-best netted chains for hg38-gorGor5.
- hg38.gorGor5.rbest.net.gz: hg38-referenced recip.best net to gorGor5.
- hg38.gorGor5.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from hg38 to gorGor5 through the recip.best net.
- gorGor5.hg38.rbest.net.gz: gorGor5-referenced recip.best net.
- gorGor5.hg38.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/hg38.gorGor5.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2016-06-25 13:02 -
gorGor5.hg38.rbest.chain.gz 2016-06-25 11:22 17M
gorGor5.hg38.rbest.net.gz 2016-06-25 11:21 22M
hg38.gorGor5.rbest.chain.gz 2016-06-25 11:22 17M
hg38.gorGor5.rbest.net.gz 2016-06-25 11:22 36M
md5sum.txt 2016-06-25 11:22 244