This directory contains reciprocal-best netted chains for mm10-cebCap1. - mm10.cebCap1.rbest.net.gz: mm10-referenced recip.best net to cebCap1. - mm10.cebCap1.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from mm10 to cebCap1 through the recip.best net. - cebCap1.mm10.rbest.net.gz: cebCap1-referenced recip.best net. - cebCap1.mm10.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.mm10.cebCap1.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2017-10-04 21:16 - md5sum.txt 2017-10-04 15:50 244 mm10.cebCap1.rbest.chain.gz 2017-10-04 15:49 62M cebCap1.mm10.rbest.chain.gz 2017-10-04 15:48 62M mm10.cebCap1.rbest.net.gz 2017-10-04 15:50 97M cebCap1.mm10.rbest.net.gz 2017-10-04 15:46 132M