This directory contains reciprocal-best netted chains for mm10-melGal5. - mm10.melGal5.rbest.net.gz: mm10-referenced recip.best net to melGal5. - mm10.melGal5.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from mm10 to melGal5 through the recip.best net. - melGal5.mm10.rbest.net.gz: melGal5-referenced recip.best net. - melGal5.mm10.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.mm10.melGal5.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2017-01-19 19:52 - md5sum.txt 2017-01-19 13:33 244 mm10.melGal5.rbest.chain.gz 2017-01-19 13:33 6.3M melGal5.mm10.rbest.chain.gz 2017-01-19 13:33 6.3M mm10.melGal5.rbest.net.gz 2017-01-19 13:33 11M melGal5.mm10.rbest.net.gz 2017-01-19 13:33 11M