This directory contains reciprocal-best netted chains for mm10-panTro6. - mm10.panTro6.rbest.net.gz: mm10-referenced recip.best net to panTro6. - mm10.panTro6.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from mm10 to panTro6 through the recip.best net. - panTro6.mm10.rbest.net.gz: panTro6-referenced recip.best net. - panTro6.mm10.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.mm10.panTro6.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - panTro6.mm10.rbest.net.gz 2018-03-25 07:22 141M mm10.panTro6.rbest.net.gz 2018-03-25 07:27 91M panTro6.mm10.rbest.chain.gz 2018-03-25 07:24 65M mm10.panTro6.rbest.chain.gz 2018-03-25 07:25 65M md5sum.txt 2018-03-25 07:27 244 axtRBestNet/ 2018-03-25 16:34 -