track rnaSeqStar compositeTrack on group regulation shortLabel RNAseq longLabel RNAseq analysis and raw data subGroup1 view Views expression=Expression junction=Splice_Junctions alignment=Alignments subGroup2 tissue Tissue brain=brain liver=liver dimensions dimensionX=view dimensionY=tissue sortOrder view=+ tissue=+ visibility full dragAndDrop subTracks type bed 3 noInherit on html html/rnaSeqStar track GCA_001624675.1_NOD_ShiLtJ_v1ExpressionStar shortLabel GCA_001624675.1_NOD_ShiLtJ_v1 Expression view expression visibility dense subTrack rnaSeqStar maxHeightPixels 100:24:16 autoScale on track wigStar_GCA_001624675.1_NOD_ShiLtJ_v1_brain longLabel GCA_001624675.1_NOD_ShiLtJ_v1 brain Expression shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_brain_Expression parent GCA_001624675.1_NOD_ShiLtJ_v1ExpressionStar off type bigWig bigDataUrl rnaSeqData/brain.normalized_average_expression.bw color 153,38,0 subGroups view=expression tissue=brain track wigStar_GCA_001624675.1_NOD_ShiLtJ_v1_liver longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver Expression shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_liver_Expression parent GCA_001624675.1_NOD_ShiLtJ_v1ExpressionStar off type bigWig bigDataUrl rnaSeqData/liver.normalized_average_expression.bw color 153,38,0 subGroups view=expression tissue=liver track GCA_001624675.1_NOD_ShiLtJ_v1_Alignments shortLabel Raw Alignments view alignment visibility hide subTrack rnaSeqStar track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_brain_ERR032989 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 brain RNASeq Alignments ERR032989 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_ERR032989 bigDataUrl rnaSeqData/brain.ERR032989.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=brain type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_brain_ERR032990 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 brain RNASeq Alignments ERR032990 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_ERR032990 bigDataUrl rnaSeqData/brain.ERR032990.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=brain type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_brain_ERR032991 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 brain RNASeq Alignments ERR032991 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_ERR032991 bigDataUrl rnaSeqData/brain.ERR032991.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=brain type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_brain_ERR033017 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 brain RNASeq Alignments ERR033017 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_ERR033017 bigDataUrl rnaSeqData/brain.ERR033017.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=brain type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826348 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826348 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826348 bigDataUrl rnaSeqData/liver.SRR826348.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826349 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826349 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826349 bigDataUrl rnaSeqData/liver.SRR826349.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826350 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826350 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826350 bigDataUrl rnaSeqData/liver.SRR826350.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826351 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826351 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826351 bigDataUrl rnaSeqData/liver.SRR826351.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826352 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826352 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826352 bigDataUrl rnaSeqData/liver.SRR826352.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826353 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826353 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826353 bigDataUrl rnaSeqData/liver.SRR826353.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826354 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826354 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826354 bigDataUrl rnaSeqData/liver.SRR826354.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826355 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826355 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826355 bigDataUrl rnaSeqData/liver.SRR826355.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826356 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826356 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826356 bigDataUrl rnaSeqData/liver.SRR826356.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826357 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826357 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826357 bigDataUrl rnaSeqData/liver.SRR826357.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826358 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826358 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826358 bigDataUrl rnaSeqData/liver.SRR826358.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826359 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826359 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826359 bigDataUrl rnaSeqData/liver.SRR826359.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826360 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826360 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826360 bigDataUrl rnaSeqData/liver.SRR826360.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826361 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826361 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826361 bigDataUrl rnaSeqData/liver.SRR826361.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826362 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826362 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826362 bigDataUrl rnaSeqData/liver.SRR826362.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track bamstar_GCA_001624675.1_NOD_ShiLtJ_v1_liver_SRR826363 longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver RNASeq Alignments SRR826363 shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_RNASeq_SRR826363 bigDataUrl rnaSeqData/liver.SRR826363.sortedByCoord.out.bam parent GCA_001624675.1_NOD_ShiLtJ_v1_Alignments off subGroups view=alignment tissue=liver type bam indelDoubleInsert on indelQueryInsert on showNames off pairEndsByName on track GCA_001624675.1_NOD_ShiLtJ_v1_SpliceJunctions shortLabel Splice Junctions view junction visibility squish subTrack rnaSeqStar track GCA_001624675.1_NOD_ShiLtJ_v1_brain_SpliceJunctions longLabel GCA_001624675.1_NOD_ShiLtJ_v1 brain STAR Splice Junctions shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_brain_Splice_Junctions parent GCA_001624675.1_NOD_ShiLtJ_v1_SpliceJunctions off bigDataUrl rnaSeqData/brain.filtered_splice_junctions.bb type bigBed 12 colorByStrand 255,0,0 0,0,255 subGroups view=junction tissue=brain track GCA_001624675.1_NOD_ShiLtJ_v1_liver_SpliceJunctions longLabel GCA_001624675.1_NOD_ShiLtJ_v1 liver STAR Splice Junctions shortLabel GCA_001624675.1_NOD_ShiLtJ_v1_liver_Splice_Junctions parent GCA_001624675.1_NOD_ShiLtJ_v1_SpliceJunctions off bigDataUrl rnaSeqData/liver.filtered_splice_junctions.bb type bigBed 12 colorByStrand 255,0,0 0,0,255 subGroups view=junction tissue=liver