The GENCODE Genes track (version 26lift37, March 2017) shows high-quality manual annotations merged with evidence-based automated annotations across the entire human genome generated by the GENCODE project. The GENCODE gene set presents a full merge between HAVANA manual annotation process and Ensembl automatic annotation pipeline. Priority is given to the manually curated HAVANA annotation using predicted Ensembl annotations when there are no corresponding manual annotations. The GENCODE V26 annotations on the GRCh38 (hg38) primary assembly were mapped to GRCh37 (hg19) using the process documented here.
The Ensembl human and mouse data sets are the same gene annotations as GENCODE for the corresponding release.
Selected transcript models are verified experimentally by RT-PCR amplification followed by sequencing. Those experiments can be found at GEO:
See Harrow et al. (2006) for information on verification techniques.
GENCODE version 26lift37 corresponds to Ensembl 88.
See also: The GENCODE Project