0 nestedRepeats,237 uniprot,1822 0.01 cpgIslandExt,473 cpgIslandExtUnmasked,476 cpgIslandSuper,473 0.0f cpgIslandExt,449 cpgIslandExtUnmasked,452 cpgIslandSuper,449 0.1f cpgIslandExt,451 cpgIslandExtUnmasked,454 cpgIslandSuper,451 0.5 est,709 intronEst,790 mrna,425 xenoRefGene,264 0.6 cpgIslandExt,276 cpgIslandExtUnmasked,279 cpgIslandSuper,276 000 est,669 intronEst,750 1 cpgIslandExt,245 cpgIslandExt,429 cpgIslandExt,458 cpgIslandExt,485 cpgIslandExtUnmasked,248 cpgIslandExtUnmasked,432 cpgIslandExtUnmasked,461 cpgIslandExtUnmasked,488 cpgIslandSuper,245 cpgIslandSuper,429 cpgIslandSuper,458 cpgIslandSuper,485 est,792 intronEst,876 mrna,509 uniprot,1110 uniprot,1314 uniprot,1346 uniprot,1490 uniprot,1927 xenoRefGene,387 10 uniprot,1928 100 microsat,70 nestedRepeats,230 100.0 cpgIslandExt,474 cpgIslandExtUnmasked,477 cpgIslandSuper,474 1000 nestedRepeats,238 1000000 uniprot,1824 10607616 nestedRepeats,394 rmsk,417 10973072 nestedRepeats,361 rmsk,384 11932250 est,816 intronEst,900 mrna,533 xenoRefGene,317 12 est,812 intronEst,896 mrna,529 xenoRefGene,313 14681350 est,798 intronEst,882 mrna,515 15 microsat,30 microsat,79 microsat,130 simpleRepeat,90 xenoRefGene,236 15108278 uniprot,2051 15608248 xenoRefGene,393 16 nestedRepeats,357 rmsk,380 17 cpgIslandExt,241 cpgIslandExtUnmasked,244 cpgIslandSuper,241 196 cpgIslandExt,619 cpgIslandExtUnmasked,622 cpgIslandSuper,619 1987 cpgIslandExt,379 cpgIslandExt,616 cpgIslandExtUnmasked,382 cpgIslandExtUnmasked,619 cpgIslandSuper,379 cpgIslandSuper,616 1990 blastHg18KG,173 1996 nestedRepeats,410 rmsk,433 1996-2010 nestedRepeats,334 rmsk,357 1999 microsat,103 microsat,128 nestedRepeats,388 rmsk,411 simpleRepeat,65 simpleRepeat,88 2 cpgIslandExt,421 cpgIslandExt,426 cpgIslandExt,428 cpgIslandExt,434 cpgIslandExt,460 cpgIslandExt,475 cpgIslandExt,620 cpgIslandExtUnmasked,424 cpgIslandExtUnmasked,429 cpgIslandExtUnmasked,431 cpgIslandExtUnmasked,437 cpgIslandExtUnmasked,463 cpgIslandExtUnmasked,478 cpgIslandExtUnmasked,623 cpgIslandSuper,421 cpgIslandSuper,426 cpgIslandSuper,428 cpgIslandSuper,434 cpgIslandSuper,460 cpgIslandSuper,475 cpgIslandSuper,620 microsat,66 microsat,132 simpleRepeat,92 uniprot,1121 uniprot,1331 2-3 uniprot,1572 20 cpgIslandExt,618 cpgIslandExtUnmasked,621 cpgIslandSuper,618 200 cpgIslandExt,271 cpgIslandExtUnmasked,274 cpgIslandSuper,271 2000 nestedRepeats,63 nestedRepeats,355 rmsk,99 rmsk,378 2002 est,810 intronEst,894 mrna,527 xenoRefGene,311 2004 est,790 intronEst,874 mrna,507 uniprot,2045 2005 xenoRefGene,385 2012 uniprot,2000 2013 est,765 intronEst,849 mrna,482 2014 xenoRefGene,352 2022_03 uniprot,1911 2023 uniprot,1191 215 blastHg18KG,176 22102590 uniprot,2007 23 uniprot,2047 23193287 est,772 intronEst,856 mrna,489 24259432 xenoRefGene,359 25 xenoRefGene,271 261-82 cpgIslandExt,621 cpgIslandExtUnmasked,624 cpgIslandSuper,621 27 microsat,131 simpleRepeat,91 2n cpgIslandExt,487 cpgIslandExtUnmasked,490 cpgIslandSuper,487 3 blastHg18KG,177 cpgIslandExt,432 cpgIslandExt,462 cpgIslandExtUnmasked,435 cpgIslandExtUnmasked,465 cpgIslandSuper,432 cpgIslandSuper,462 est,481 est,534 est,588 intronEst,114 intronEst,562 intronEst,615 intronEst,669 microsat,68 uniprot,1123 uniprot,1194 300 cpgIslandExt,6 cpgIslandExtUnmasked,9 cpgIslandSuper,6 32 est,793 intronEst,84 intronEst,877 mrna,510 33 xenoRefGene,388 3656447 cpgIslandExt,623 cpgIslandExtUnmasked,626 cpgIslandSuper,623 4 est,813 intronEst,897 mrna,530 xenoRefGene,314 40 uniprot,2002 403-410 blastHg18KG,178 41 est,767 intronEst,851 mrna,484 418-420 nestedRepeats,359 rmsk,382 42 xenoRefGene,354 464-70 uniprot,2049 5 blastHg18KG,175 cpgIslandExt,464 cpgIslandExtUnmasked,467 cpgIslandSuper,464 est,478 est,519 est,545 intronEst,559 intronEst,600 intronEst,626 uniprot,2048 5-base gc5Base,6 gc5Base,27 50 cpgIslandExt,265 cpgIslandExtUnmasked,268 cpgIslandSuper,265 nestedRepeats,229 500 est,35 intronEst,46 573-80 microsat,133 simpleRepeat,93 6 cpgIslandExt,466 cpgIslandExt,469 cpgIslandExt,477 cpgIslandExtUnmasked,469 cpgIslandExtUnmasked,472 cpgIslandExtUnmasked,480 cpgIslandSuper,466 cpgIslandSuper,469 cpgIslandSuper,477 nestedRepeats,391 nestedRepeats,412 nestedRepeats,413 rmsk,414 rmsk,435 rmsk,436 60 blastHg18KG,109 blastHg18KG,121 blastHg18KG,129 656-64 est,814 intronEst,898 mrna,531 xenoRefGene,315 657-63 nestedRepeats,392 rmsk,415 7 cpgIslandExt,472 cpgIslandExt,480 cpgIslandExtUnmasked,475 cpgIslandExtUnmasked,483 cpgIslandSuper,472 cpgIslandSuper,480 743-8 nestedRepeats,414 rmsk,437 750 est,668 intronEst,749 8994846 nestedRepeats,416 rmsk,439 9 cpgIslandExt,482 cpgIslandExtUnmasked,485 cpgIslandSuper,482 nestedRepeats,358 nestedRepeats,390 rmsk,381 rmsk,413 93 uniprot,1483 96 est,716 intronEst,797 mrna,432 9862982 microsat,135 simpleRepeat,95 _alt uniprot,1419 _fix uniprot,1421 a cpgIslandExt,43 cpgIslandExt,50 cpgIslandExt,54 cpgIslandExt,128 cpgIslandExt,166 cpgIslandExt,236 cpgIslandExt,590 cpgIslandExt,593 cpgIslandExtUnmasked,46 cpgIslandExtUnmasked,53 cpgIslandExtUnmasked,57 cpgIslandExtUnmasked,131 cpgIslandExtUnmasked,169 cpgIslandExtUnmasked,239 cpgIslandExtUnmasked,593 cpgIslandExtUnmasked,596 cpgIslandSuper,43 cpgIslandSuper,50 cpgIslandSuper,54 cpgIslandSuper,128 cpgIslandSuper,166 cpgIslandSuper,236 cpgIslandSuper,590 cpgIslandSuper,593 est,118 est,135 est,170 est,196 est,269 est,388 est,468 est,472 est,598 est,624 est,632 est,685 est,704 gap,67 gap,71 gap,101 gap,117 gap,120 gap,127 gap,130 gc5Base,44 gold,49 gold,108 gold,114 intronEst,117 intronEst,151 intronEst,199 intronEst,216 intronEst,251 intronEst,277 intronEst,350 intronEst,469 intronEst,549 intronEst,553 intronEst,679 intronEst,705 intronEst,713 intronEst,766 intronEst,785 microsat,53 microsat,119 mrna,64 mrna,81 mrna,116 mrna,142 mrna,215 mrna,334 mrna,401 mrna,420 nestedRepeats,177 nestedRepeats,226 nestedRepeats,344 nestedRepeats,363 quality,45 quality,60 rmsk,36 rmsk,56 rmsk,226 rmsk,240 rmsk,367 rmsk,386 simpleRepeat,79 uniprot,140 uniprot,311 uniprot,418 uniprot,459 uniprot,480 uniprot,490 uniprot,523 uniprot,603 uniprot,622 uniprot,708 uniprot,740 uniprot,759 uniprot,805 uniprot,965 uniprot,976 uniprot,988 uniprot,1001 uniprot,1048 uniprot,1071 uniprot,1152 uniprot,1164 uniprot,1179 uniprot,1217 uniprot,1226 uniprot,1234 uniprot,1239 uniprot,1286 uniprot,1458 uniprot,1599 uniprot,1634 uniprot,1735 uniprot,1779 uniprot,1807 uniprot,1922 uniprot,1949 uniprot,2017 uniprot,2023 uniprot,2032 xenoRefGene,240 xenoRefGene,259 xenoRefGene,329 xenoRefGene,372 aa unipModif,1 about est,34 est,414 intronEst,45 intronEst,495 microsat,98 mrna,351 simpleRepeat,59 xenoRefGene,178 above nestedRepeats,218 uniprot,1525 access cpgIslandExt,505 cpgIslandExtUnmasked,508 cpgIslandSuper,505 uniprot,896 uniprot,1706 uniprot,1838 accession xenoRefGene,118 xenoRefGene,130 according cpgIslandExt,370 cpgIslandExtUnmasked,373 cpgIslandSuper,370 nestedRepeats,183 acid blastHg18KG,63 unipModif,5 unipMut,4 uniprot,339 uniprot,351 acids blastHg18KG,135 est,763 est,788 intronEst,847 intronEst,872 microsat,126 mrna,480 mrna,505 simpleRepeat,86 uniprot,620 uniprot,1998 xenoRefGene,350 xenoRefGene,383 acronym uniprot,546 added nestedRepeats,147 uniprot,1187 additional nestedRepeats,288 rmsk,295 admin cpgIslandExt,577 cpgIslandExtUnmasked,580 cpgIslandSuper,577 uniprot,1917 af nestedRepeats,372 nestedRepeats,396 rmsk,395 rmsk,419 afa nestedRepeats,325 rmsk,348 after cpgIslandExt,94 cpgIslandExt,326 cpgIslandExtUnmasked,97 cpgIslandExtUnmasked,329 cpgIslandSuper,94 cpgIslandSuper,326 uniprot,294 uniprot,1329 ag intronEst,91 again uniprot,629 uniprot,1500 against est,653 intronEst,37 intronEst,734 mrna,344 mrna,393 xenoRefGene,222 aids cpgIslandExt,86 cpgIslandExtUnmasked,89 cpgIslandSuper,86 al cpgIslandExt,378 cpgIslandExtUnmasked,381 cpgIslandSuper,378 xenoRefGene,341 alejo uniprot,1966 algorithms uniprot,52 align est,683 intronEst,764 uniprot,1216 aligned blastHg18KG,47 blastHg18KG,71 est,652 est,688 intronEst,36 intronEst,155 intronEst,733 intronEst,769 mrna,392 mrna,404 uniprot,783 uniprot,973 uniprot,1007 uniprot,1246 uniprot,1335 uniprot,1472 xenoRefGene,221 xenoRefGene,243 aligning est,400 intronEst,481 uniprot,952 alignment blastHg18KG,167 est,58 est,423 est,429 est,441 est,693 est,806 intronEst,78 intronEst,142 intronEst,504 intronEst,510 intronEst,522 intronEst,774 intronEst,890 mrna,39 mrna,362 mrna,368 mrna,380 mrna,409 mrna,523 unipAliSwissprot,4 unipAliTrembl,4 uniprot,108 uniprot,135 uniprot,191 uniprot,807 uniprot,914 uniprot,1175 uniprot,1429 uniprot,1523 uniprot,1620 uniprot,1629 uniprot,1636 uniprot,1642 uniprot,1704 uniprot,1862 xenoRefGene,232 xenoRefGene,248 xenoRefGene,307 alignments blastHg18KG,18 est,16 est,702 intronEst,17 intronEst,783 mrna,17 mrna,418 rmsk,306 uniprot,82 uniprot,100 uniprot,637 uniprot,793 uniprot,814 uniprot,876 uniprot,1138 uniprot,1148 uniprot,1161 uniprot,1309 uniprot,1410 uniprot,1487 xenoRefGene,257 all cpgIslandExt,327 cpgIslandExt,527 cpgIslandExtUnmasked,6 cpgIslandExtUnmasked,330 cpgIslandExtUnmasked,530 cpgIslandSuper,327 cpgIslandSuper,527 est,192 est,246 est,301 est,396 est,488 gold,126 intronEst,120 intronEst,273 intronEst,327 intronEst,382 intronEst,477 intronEst,569 mrna,138 mrna,192 mrna,247 nestedRepeats,138 nestedRepeats,170 rmsk,65 uniprot,89 uniprot,121 uniprot,204 uniprot,395 uniprot,956 uniprot,1107 uniprot,1167 uniprot,1311 uniprot,1337 uniprot,1343 uniprot,1418 uniprot,1542 uniprot,1685 uniprot,1979 allowed est,664 intronEst,745 allows est,391 intronEst,472 mrna,337 xenoRefGene,149 aln unipAliSwissprot,2 unipAliTrembl,2 also blastHg18KG,137 cpgIslandExt,531 cpgIslandExtUnmasked,534 cpgIslandSuper,531 est,273 est,381 est,432 est,601 gold,34 intronEst,354 intronEst,462 intronEst,513 intronEst,682 mrna,219 mrna,327 mrna,371 uniprot,666 uniprot,706 uniprot,1799 alt uniprot,850 alter est,129 intronEst,210 mrna,75 alternating gold,80 alternative unipAliSwissprot,16 uniprot,163 uniprot,670 altschul blastHg18KG,155 alus rmsk,160 always gold,111 uniprot,503 uniprot,960 uniprot,1411 uniprot,1579 amino blastHg18KG,62 blastHg18KG,134 unipModif,4 unipMut,3 uniprot,338 uniprot,350 uniprot,619 amount rmsk,215 an blastHg18KG,91 cpgIslandExt,66 cpgIslandExtUnmasked,69 cpgIslandSuper,66 est,450 est,497 est,580 gc5Base,65 intronEst,61 intronEst,531 intronEst,578 intronEst,661 nestedRepeats,196 nestedRepeats,347 quality,79 rmsk,370 uniprot,765 uniprot,899 uniprot,1203 uniprot,1467 uniprot,1568 xenoRefGene,143 xenoRefGene,231 xenoRefGene,343 analysis uniprot,1648 uniprot,1728 analyze microsat,122 simpleRepeat,82 and blastHg18KG,10 blastHg18KG,25 blastHg18KG,125 cpgIslandExt,12 cpgIslandExt,35 cpgIslandExt,183 cpgIslandExt,244 cpgIslandExt,248 cpgIslandExt,295 cpgIslandExt,508 cpgIslandExt,599 cpgIslandExtUnmasked,15 cpgIslandExtUnmasked,38 cpgIslandExtUnmasked,186 cpgIslandExtUnmasked,247 cpgIslandExtUnmasked,251 cpgIslandExtUnmasked,298 cpgIslandExtUnmasked,511 cpgIslandExtUnmasked,602 cpgIslandSuper,12 cpgIslandSuper,35 cpgIslandSuper,183 cpgIslandSuper,244 cpgIslandSuper,248 cpgIslandSuper,295 cpgIslandSuper,508 cpgIslandSuper,599 est,10 est,26 est,48 est,88 est,132 est,293 est,457 est,471 est,479 est,607 est,713 gap,5 gap,48 gap,70 gap,126 gap,135 gc5Base,9 gc5Base,22 gc5Base,74 gold,6 gold,43 gold,82 gold,96 gold,102 intronEst,11 intronEst,27 intronEst,88 intronEst,132 intronEst,169 intronEst,213 intronEst,374 intronEst,538 intronEst,552 intronEst,560 intronEst,688 intronEst,794 microsat,4 microsat,8 microsat,33 microsat,36 microsat,67 microsat,72 microsat,75 mrna,10 mrna,24 mrna,29 mrna,78 mrna,239 mrna,358 mrna,429 nestedRepeats,12 nestedRepeats,38 nestedRepeats,113 nestedRepeats,162 nestedRepeats,166 nestedRepeats,231 nestedRepeats,256 nestedRepeats,309 nestedRepeats,315 nestedRepeats,346 nestedRepeats,375 quality,9 quality,101 rmsk,7 rmsk,28 rmsk,137 rmsk,221 rmsk,332 rmsk,338 rmsk,369 rmsk,398 simpleRepeat,9 simpleRepeat,42 unipAliSwissprot,19 unipAliTrembl,11 unipChain,9 unipConflict,7 unipDisulfBond,7 unipDomain,5 unipInterest,7 unipLocCytopl,6 unipLocExtra,6 unipLocSignal,7 unipLocTransMemb,6 unipModif,8 unipMut,7 unipOther,7 unipRepeat,5 unipStruct,9 uniprot,8 uniprot,17 uniprot,174 uniprot,329 uniprot,345 uniprot,355 uniprot,369 uniprot,378 uniprot,403 uniprot,433 uniprot,439 uniprot,448 uniprot,488 uniprot,517 uniprot,568 uniprot,589 uniprot,611 uniprot,617 uniprot,702 uniprot,761 uniprot,796 uniprot,866 uniprot,926 uniprot,939 uniprot,1122 uniprot,1214 uniprot,1310 uniprot,1342 uniprot,1375 uniprot,1420 uniprot,1465 uniprot,1498 uniprot,1598 uniprot,1617 uniprot,1650 uniprot,1691 uniprot,1790 uniprot,1898 uniprot,1958 uniprot,1970 uniprot,2028 uniprot,2036 xenoRefGene,8 xenoRefGene,17 xenoRefGene,45 xenoRefGene,79 xenoRefGene,129 xenoRefGene,154 xenoRefGene,187 xenoRefGene,200 xenoRefGene,268 xenoRefGene,295 xenoRefGene,380 annot unipOther,2 annotated rmsk,67 uniprot,736 uniprot,994 uniprot,1014 uniprot,1027 uniprot,1034 uniprot,1040 uniprot,1053 uniprot,1082 uniprot,1233 uniprot,1265 annotation rmsk,38 uniprot,143 uniprot,466 uniprot,487 uniprot,530 uniprot,605 uniprot,624 uniprot,1731 annotationonprotein uniprot,1929 annotations nestedRepeats,71 unipOther,5 unipStruct,7 uniprot,6 uniprot,18 uniprot,54 uniprot,96 uniprot,128 uniprot,171 uniprot,212 uniprot,363 uniprot,394 uniprot,397 uniprot,455 uniprot,501 uniprot,595 uniprot,631 uniprot,662 uniprot,704 uniprot,718 uniprot,763 uniprot,1438 uniprot,1504 uniprot,1514 uniprot,1757 xenoRefGene,188 any est,316 est,550 intronEst,397 intronEst,631 mrna,262 uniprot,660 uniprot,1146 uniprot,1250 api cpgIslandExt,519 cpgIslandExtUnmasked,522 cpgIslandSuper,519 aplcal1 uniprot,1816 apply est,188 intronEst,269 mrna,134 approach uniprot,1531 appropriate xenoRefGene,112 apr est,811 intronEst,895 mrna,528 xenoRefGene,312 apsects gc5Base,51 archive uniprot,893 uniprot,1670 uniprot,1908 archives uniprot,1832 are cpgIslandExt,8 cpgIslandExt,17 cpgIslandExt,28 cpgIslandExt,116 cpgIslandExt,149 cpgIslandExt,153 cpgIslandExtUnmasked,11 cpgIslandExtUnmasked,20 cpgIslandExtUnmasked,31 cpgIslandExtUnmasked,119 cpgIslandExtUnmasked,152 cpgIslandExtUnmasked,156 cpgIslandSuper,8 cpgIslandSuper,17 cpgIslandSuper,28 cpgIslandSuper,116 cpgIslandSuper,149 cpgIslandSuper,153 est,30 est,67 est,149 est,159 gap,36 gap,104 gap,149 gold,51 gold,74 gold,91 gold,131 intronEst,41 intronEst,230 intronEst,240 intronEst,804 microsat,16 microsat,25 microsat,52 mrna,48 mrna,95 mrna,105 nestedRepeats,74 nestedRepeats,102 nestedRepeats,140 nestedRepeats,146 nestedRepeats,164 nestedRepeats,172 nestedRepeats,181 nestedRepeats,209 nestedRepeats,274 nestedRepeats,281 rmsk,43 rmsk,288 rmsk,304 rmsk,312 simpleRepeat,49 uniprot,55 uniprot,93 uniprot,124 uniprot,146 uniprot,165 uniprot,175 uniprot,208 uniprot,456 uniprot,502 uniprot,555 uniprot,579 uniprot,596 uniprot,644 uniprot,679 uniprot,735 uniprot,868 uniprot,880 uniprot,1006 uniprot,1013 uniprot,1033 uniprot,1061 uniprot,1086 uniprot,1117 uniprot,1149 uniprot,1318 uniprot,1350 uniprot,1425 uniprot,1433 uniprot,1454 uniprot,1659 uniprot,1867 uniprot,1895 xenoRefGene,40 xenoRefGene,105 xenoRefGene,203 areas cpgIslandExt,305 cpgIslandExtUnmasked,308 cpgIslandSuper,305 gc5Base,37 arian nestedRepeats,305 rmsk,16 rmsk,328 arrangement cpgIslandExt,67 cpgIslandExtUnmasked,70 cpgIslandSuper,67 arrows nestedRepeats,145 nestedRepeats,163 as cpgIslandExt,165 cpgIslandExt,548 cpgIslandExt,550 cpgIslandExtUnmasked,168 cpgIslandExtUnmasked,551 cpgIslandExtUnmasked,553 cpgIslandSuper,165 cpgIslandSuper,548 cpgIslandSuper,550 est,597 gap,38 gold,36 intronEst,678 microsat,21 nestedRepeats,125 quality,91 rmsk,53 rmsk,55 uniprot,307 uniprot,598 uniprot,600 uniprot,621 uniprot,1100 uniprot,1778 ascii uniprot,1762 aspects quality,67 assembled gold,24 assemblies rmsk,107 assembly gap,14 gap,84 gap,113 gold,1 gold,2 gold,14 quality,26 quality,97 uniprot,445 uniprot,701 assembly.2bit cpgIslandExt,412 cpgIslandExtUnmasked,415 cpgIslandSuper,412 associated cpgIslandExt,18 cpgIslandExt,38 cpgIslandExt,510 cpgIslandExtUnmasked,21 cpgIslandExtUnmasked,41 cpgIslandExtUnmasked,513 cpgIslandSuper,18 cpgIslandSuper,38 cpgIslandSuper,510 est,110 gc5Base,34 intronEst,191 rmsk,224 simpleRepeat,51 uniprot,787 astashyn xenoRefGene,328 at blastHg18KG,127 cpgIslandExt,155 cpgIslandExt,218 cpgIslandExt,235 cpgIslandExtUnmasked,158 cpgIslandExtUnmasked,221 cpgIslandExtUnmasked,238 cpgIslandSuper,155 cpgIslandSuper,218 cpgIslandSuper,235 est,265 est,549 est,594 est,714 est,730 intronEst,67 intronEst,82 intronEst,107 intronEst,346 intronEst,630 intronEst,675 intronEst,795 intronEst,814 microsat,28 microsat,77 mrna,211 mrna,430 mrna,447 quality,29 rmsk,243 rmsk,267 uniprot,825 uniprot,1946 uniprot,1991 xenoRefGene,93 xenoRefGene,269 xenoRefGene,285 attempt est,581 intronEst,662 augustus uniprot,835 uniprot,867 automated uniprot,1468 uniprot,1727 automatically uniprot,1565 av uniprot,2015 available cpgIslandExt,543 cpgIslandExtUnmasked,546 cpgIslandSuper,543 nestedRepeats,259 nestedRepeats,276 rmsk,73 uniprot,881 uniprot,1660 uniprot,1981 average nestedRepeats,186 nestedRepeats,221 averaged quality,52 aware uniprot,1456 awk cpgIslandExt,424 cpgIslandExtUnmasked,427 cpgIslandSuper,424 bairoch uniprot,2022 base cpgIslandExt,46 cpgIslandExt,53 cpgIslandExt,234 cpgIslandExtUnmasked,49 cpgIslandExtUnmasked,56 cpgIslandExtUnmasked,237 cpgIslandSuper,46 cpgIslandSuper,53 cpgIslandSuper,234 est,386 est,420 est,697 est,705 est,717 intronEst,467 intronEst,501 intronEst,778 intronEst,786 intronEst,798 mrna,359 mrna,413 mrna,421 mrna,433 quality,23 quality,40 rmsk,217 rmsk,219 rmsk,222 xenoRefGene,252 xenoRefGene,260 xenoRefGene,272 based gold,52 uniprot,60 uniprot,727 uniprot,1604 bases cpgIslandExt,7 cpgIslandExt,353 cpgIslandExtUnmasked,10 cpgIslandExtUnmasked,356 cpgIslandSuper,7 cpgIslandSuper,353 est,36 est,397 est,670 gc5Base,25 intronEst,47 intronEst,85 intronEst,478 intronEst,751 basic blastHg18KG,165 basis cpgIslandExt,289 cpgIslandExtUnmasked,292 cpgIslandSuper,289 uniprot,1570 be cpgIslandExt,37 cpgIslandExt,70 cpgIslandExt,187 cpgIslandExt,513 cpgIslandExt,532 cpgIslandExt,561 cpgIslandExt,572 cpgIslandExtUnmasked,40 cpgIslandExtUnmasked,73 cpgIslandExtUnmasked,190 cpgIslandExtUnmasked,516 cpgIslandExtUnmasked,535 cpgIslandExtUnmasked,564 cpgIslandExtUnmasked,575 cpgIslandSuper,37 cpgIslandSuper,70 cpgIslandSuper,187 cpgIslandSuper,513 cpgIslandSuper,532 cpgIslandSuper,561 cpgIslandSuper,572 est,109 est,122 est,144 est,253 est,263 est,274 est,305 est,323 est,333 est,382 est,433 est,529 est,637 gap,29 gc5Base,41 intronEst,58 intronEst,81 intronEst,190 intronEst,203 intronEst,225 intronEst,334 intronEst,344 intronEst,355 intronEst,386 intronEst,404 intronEst,414 intronEst,463 intronEst,514 intronEst,610 intronEst,718 microsat,19 microsat,39 mrna,68 mrna,90 mrna,199 mrna,209 mrna,220 mrna,251 mrna,269 mrna,279 mrna,328 mrna,372 nestedRepeats,269 nestedRepeats,291 quality,57 rmsk,278 rmsk,284 rmsk,298 simpleRepeat,44 uniprot,181 uniprot,246 uniprot,1094 uniprot,1105 uniprot,1143 uniprot,1197 uniprot,1270 uniprot,1327 uniprot,1556 uniprot,1694 uniprot,1715 uniprot,1740 uniprot,1750 uniprot,1759 uniprot,1770 uniprot,1793 uniprot,1800 uniprot,1882 xenoRefGene,88 bears est,94 intronEst,175 because cpgIslandExt,61 cpgIslandExt,107 cpgIslandExtUnmasked,64 cpgIslandExtUnmasked,110 cpgIslandSuper,61 cpgIslandSuper,107 est,629 intronEst,710 uniprot,674 been intronEst,8 nestedRepeats,89 rmsk,70 rmsk,109 uniprot,34 uniprot,47 uniprot,303 uniprot,1043 before est,566 intronEst,647 uniprot,934 below nestedRepeats,68 rmsk,104 uniprot,73 uniprot,92 uniprot,189 uniprot,207 uniprot,769 uniprot,898 benson est,747 est,775 intronEst,831 intronEst,859 microsat,102 microsat,112 microsat,114 mrna,464 mrna,492 simpleRepeat,64 simpleRepeat,72 simpleRepeat,74 best blastHg18KG,102 est,712 intronEst,793 mrna,428 uniprot,1074 uniprot,1415 xenoRefGene,267 beta uniprot,364 better est,74 mrna,55 between est,17 est,85 gap,94 gold,46 gold,88 gold,93 intronEst,18 intronEst,76 intronEst,166 mrna,18 uniprot,375 uniprot,922 uniprot,1371 uniprot,1615 bias uniprot,400 bigbed uniprot,1736 bigbedtobed uniprot,1767 uniprot,1812 binaries uniprot,1791 binary cpgIslandExt,570 cpgIslandExtUnmasked,573 cpgIslandSuper,570 uniprot,1781 biol blastHg18KG,172 cpgIslandExt,615 cpgIslandExtUnmasked,618 cpgIslandSuper,615 biological uniprot,320 black gap,39 gap,78 blast blastHg18KG,146 blastHg18KG,153 uniprot,949 uniprot,1084 uniprot,1115 blast-like est,805 intronEst,889 mrna,522 xenoRefGene,306 blat blastHg18KG,54 blastHg18KG,179 est,657 est,666 est,803 intronEst,738 intronEst,747 intronEst,887 mrna,398 mrna,520 xenoRefGene,228 blat--the xenoRefGene,305 blocks gold,98 gold,125 intronEst,79 blog cpgIslandExt,553 cpgIslandExtUnmasked,556 cpgIslandSuper,553 blue unipAliSwissprot,11 unipAliSwissprot,15 uniprot,507 uniprot,583 bond uniprot,473 bonds unipDisulfBond,2 unipDisulfBond,5 uniprot,334 uniprot,336 both uniprot,675 uniprot,1616 xenoRefGene,126 xenoRefGene,197 boundaries blastHg18KG,59 gold,73 box est,208 est,219 est,259 gap,79 intronEst,289 intronEst,300 intronEst,340 mrna,154 mrna,165 mrna,205 xenoRefGene,216 boxes est,179 gap,40 intronEst,260 mrna,125 nestedRepeats,126 bp cpgIslandExt,272 cpgIslandExtUnmasked,275 cpgIslandSuper,272 brian blastHg18KG,199 uniprot,1959 bridge gold,123 bridged gap,68 briefly uniprot,778 brown gold,83 gold,97 xenoRefGene,322 browser cpgIslandExt,522 cpgIslandExtUnmasked,525 cpgIslandSuper,522 est,226 est,350 est,367 intronEst,307 intronEst,431 intronEst,448 mrna,172 mrna,296 mrna,313 nestedRepeats,243 uniprot,1544 uniprot,1721 browsing uniprot,1662 build uniprot,1552 but blastHg18KG,96 est,486 est,543 est,596 intronEst,567 intronEst,624 intronEst,677 rmsk,311 uniprot,638 uniprot,1047 by blastHg18KG,6 blastHg18KG,182 blastHg18KG,195 cpgIslandExt,49 cpgIslandExt,194 cpgIslandExt,229 cpgIslandExt,406 cpgIslandExt,596 cpgIslandExtUnmasked,52 cpgIslandExtUnmasked,197 cpgIslandExtUnmasked,232 cpgIslandExtUnmasked,409 cpgIslandExtUnmasked,599 cpgIslandSuper,49 cpgIslandSuper,194 cpgIslandSuper,229 cpgIslandSuper,406 cpgIslandSuper,596 est,268 est,496 est,665 est,743 gap,61 gap,106 gc5Base,81 gold,76 intronEst,93 intronEst,349 intronEst,577 intronEst,746 intronEst,827 microsat,110 mrna,214 mrna,460 nestedRepeats,8 nestedRepeats,91 nestedRepeats,129 quality,107 rmsk,4 rmsk,14 rmsk,50 simpleRepeat,6 simpleRepeat,22 simpleRepeat,70 uniprot,39 uniprot,49 uniprot,224 uniprot,713 uniprot,720 uniprot,818 uniprot,987 uniprot,995 uniprot,1015 uniprot,1028 uniprot,1045 uniprot,1538 uniprot,1764 uniprot,1943 xenoRefGene,102 xenoRefGene,107 xenoRefGene,171 xenoRefGene,189 xenoRefGene,195 xenoRefGene,292 xenoRefGene,297 c cpgIslandExt,44 cpgIslandExt,389 cpgIslandExtUnmasked,47 cpgIslandExtUnmasked,392 cpgIslandSuper,44 cpgIslandSuper,389 gc5Base,23 calculated cpgIslandExt,369 cpgIslandExtUnmasked,372 cpgIslandSuper,369 calculation cpgIslandExt,399 cpgIslandExtUnmasked,402 cpgIslandSuper,399 can cpgIslandExt,512 cpgIslandExt,530 cpgIslandExt,560 cpgIslandExt,571 cpgIslandExtUnmasked,515 cpgIslandExtUnmasked,533 cpgIslandExtUnmasked,563 cpgIslandExtUnmasked,574 cpgIslandSuper,512 cpgIslandSuper,530 cpgIslandSuper,560 cpgIslandSuper,571 est,121 est,252 intronEst,202 intronEst,333 mrna,67 mrna,198 rmsk,116 simpleRepeat,35 uniprot,180 uniprot,656 uniprot,1064 uniprot,1093 uniprot,1104 uniprot,1326 uniprot,1555 uniprot,1693 uniprot,1714 uniprot,1739 uniprot,1749 uniprot,1758 uniprot,1769 uniprot,1792 uniprot,1798 uniprot,1881 xenoRefGene,87 cannot uniprot,1269 canonical intronEst,70 cap-selected est,559 intronEst,640 cap-selection est,568 intronEst,649 cases uniprot,757 uniprot,1183 uniprot,1452 cat uniprot,1936 cavanaugh est,749 intronEst,833 mrna,466 cdna est,461 est,464 intronEst,542 intronEst,545 cell uniprot,563 cells est,456 intronEst,537 certain nestedRepeats,294 rmsk,301 cg cpgIslandExt,243 cpgIslandExt,281 cpgIslandExt,339 cpgIslandExtUnmasked,246 cpgIslandExtUnmasked,284 cpgIslandExtUnmasked,342 cpgIslandSuper,243 cpgIslandSuper,281 cpgIslandSuper,339 chain uniprot,290 chained blastHg18KG,7 blastHg18KG,88 chains blastHg18KG,104 blastHg18KG,117 unipChain,1 unipChain,7 uniprot,288 change cpgIslandExt,210 cpgIslandExtUnmasked,213 cpgIslandSuper,210 est,125 intronEst,206 mrna,71 changed rmsk,285 uniprot,1382 characteristic est,330 intronEst,411 mrna,276 checkbox uniprot,231 chmod uniprot,1921 choose cpgIslandExt,581 cpgIslandExtUnmasked,584 cpgIslandSuper,581 est,286 est,325 intronEst,367 intronEst,406 mrna,232 mrna,271 uniprot,657 chosen est,348 intronEst,429 mrna,294 chr6 uniprot,1820 chris uniprot,1954 chrom uniprot,1819 chromosome uniprot,1416 circle rmsk,202 cited cpgIslandExt,374 cpgIslandExtUnmasked,377 cpgIslandSuper,374 clark est,751 intronEst,835 mrna,468 class rmsk,199 rmsk,253 classes rmsk,150 classification rmsk,266 rmsk,282 clawson gc5Base,83 quality,109 cleaved uniprot,249 click gc5Base,56 quality,72 uniprot,229 uniprot,481 uniprot,1673 xenoRefGene,110 xenoRefGene,214 clicking uniprot,1633 clipped nestedRepeats,224 cloned est,466 intronEst,547 closed gap,30 cm xenoRefGene,333 code quality,104 uniprot,1546 uniprot,1775 uniprot,1789 coding simpleRepeat,38 uniprot,1102 uniprot,1133 xenoRefGene,212 codon mrna,332 mrna,357 xenoRefGene,138 xenoRefGene,145 xenoRefGene,160 xenoRefGene,190 codons xenoRefGene,165 xenoRefGene,172 coiled-coil uniprot,367 collapsed nestedRepeats,173 collection xenoRefGene,33 color est,131 est,327 intronEst,212 intronEst,408 mrna,77 mrna,273 rmsk,207 xenoRefGene,58 xenoRefGene,169 coloration gold,84 colored est,434 intronEst,515 mrna,373 uniprot,160 uniprot,176 coloring est,421 intronEst,502 mrna,333 mrna,360 xenoRefGene,139 xenoRefGene,146 xenoRefGene,184 colors xenoRefGene,81 xenoRefGene,161 column nestedRepeats,107 combination est,289 intronEst,370 mrna,235 combined rmsk,232 command cpgIslandExt,409 cpgIslandExt,503 cpgIslandExtUnmasked,412 cpgIslandExtUnmasked,506 cpgIslandSuper,409 cpgIslandSuper,503 uniprot,1871 uniprot,1875 commands uniprot,1902 comment uniprot,260 uniprot,282 uniprot,531 uniprot,615 common cpgIslandExt,30 cpgIslandExtUnmasked,33 cpgIslandSuper,30 compare mrna,342 xenoRefGene,155 comparison uniprot,1260 compiled uniprot,1771 completely uniprot,1464 xenoRefGene,137 complexity nestedRepeats,40 rmsk,30 rmsk,182 components gold,127 composed uniprot,1396 compositional uniprot,399 computational uniprot,51 configuration est,49 gc5Base,60 gc5Base,69 intronEst,133 mrna,30 nestedRepeats,114 quality,75 quality,83 rmsk,138 uniprot,235 uniprot,449 uniprot,650 uniprot,1755 xenoRefGene,46 configured est,383 gc5Base,42 intronEst,464 mrna,329 quality,58 xenoRefGene,89 conflicts unipConflict,2 unipConflict,5 uniprot,373 connect uniprot,1677 considerable est,640 intronEst,721 considered intronEst,59 consistency uniprot,402 consortium uniprot,1986 constructed cpgIslandExt,322 cpgIslandExt,495 cpgIslandExtUnmasked,325 cpgIslandExtUnmasked,498 cpgIslandSuper,322 cpgIslandSuper,495 construction cpgIslandExt,311 cpgIslandExtUnmasked,314 cpgIslandSuper,311 consult est,220 intronEst,301 mrna,166 contact uniprot,686 uniprot,1440 contain uniprot,1163 contains blastHg18KG,16 est,245 gap,85 intronEst,326 mrna,191 xenoRefGene,142 contamination est,628 intronEst,99 intronEst,709 content cpgIslandExt,263 cpgIslandExtUnmasked,266 cpgIslandSuper,263 gc5Base,31 context gap,116 contig gap,118 gold,72 gold,141 contigs gap,52 gap,99 gap,133 gold,26 gold,29 gold,47 gold,64 gold,89 gold,106 controls cpgIslandExt,217 cpgIslandExtUnmasked,220 cpgIslandSuper,217 xenoRefGene,92 convenience uniprot,404 conventions est,47 est,55 intronEst,131 intronEst,139 mrna,28 mrna,36 nestedRepeats,112 rmsk,136 uniprot,447 xenoRefGene,44 xenoRefGene,52 converted uniprot,1477 uniprot,1760 coordinates uniprot,29 uniprot,643 uniprot,1848 uniprot,1855 uniprot,1886 uniprot,1892 copies microsat,80 copy uniprot,419 correct uniprot,962 uniprot,1222 corresponds est,228 intronEst,309 mrna,174 count cpgIslandExt,334 cpgIslandExt,357 cpgIslandExtUnmasked,337 cpgIslandExtUnmasked,360 cpgIslandSuper,334 cpgIslandSuper,357 cover est,561 intronEst,642 coverage uniprot,1485 cpg cpgIslandExt,1 cpgIslandExt,3 cpgIslandExt,15 cpgIslandExt,26 cpgIslandExt,55 cpgIslandExt,147 cpgIslandExt,176 cpgIslandExt,225 cpgIslandExt,316 cpgIslandExt,319 cpgIslandExt,333 cpgIslandExt,346 cpgIslandExt,351 cpgIslandExt,356 cpgIslandExt,367 cpgIslandExt,382 cpgIslandExt,385 cpgIslandExt,506 cpgIslandExt,608 cpgIslandExtUnmasked,2 cpgIslandExtUnmasked,3 cpgIslandExtUnmasked,18 cpgIslandExtUnmasked,29 cpgIslandExtUnmasked,58 cpgIslandExtUnmasked,150 cpgIslandExtUnmasked,179 cpgIslandExtUnmasked,228 cpgIslandExtUnmasked,319 cpgIslandExtUnmasked,322 cpgIslandExtUnmasked,336 cpgIslandExtUnmasked,349 cpgIslandExtUnmasked,354 cpgIslandExtUnmasked,359 cpgIslandExtUnmasked,370 cpgIslandExtUnmasked,385 cpgIslandExtUnmasked,388 cpgIslandExtUnmasked,509 cpgIslandExtUnmasked,611 cpgIslandSuper,1 cpgIslandSuper,3 cpgIslandSuper,15 cpgIslandSuper,26 cpgIslandSuper,55 cpgIslandSuper,147 cpgIslandSuper,176 cpgIslandSuper,225 cpgIslandSuper,316 cpgIslandSuper,319 cpgIslandSuper,333 cpgIslandSuper,346 cpgIslandSuper,351 cpgIslandSuper,356 cpgIslandSuper,367 cpgIslandSuper,382 cpgIslandSuper,385 cpgIslandSuper,506 cpgIslandSuper,608 cpg_lh cpgIslandExt,418 cpgIslandExt,558 cpgIslandExt,568 cpgIslandExt,580 cpgIslandExtUnmasked,421 cpgIslandExtUnmasked,561 cpgIslandExtUnmasked,571 cpgIslandExtUnmasked,583 cpgIslandSuper,418 cpgIslandSuper,558 cpgIslandSuper,568 cpgIslandSuper,580 cpg_lh.err cpgIslandExt,423 cpgIslandExtUnmasked,426 cpgIslandSuper,423 cpgisland.bed cpgIslandExt,489 cpgIslandExtUnmasked,492 cpgIslandSuper,489 cpgislandext cpgIslandExt,566 cpgIslandExtUnmasked,569 cpgIslandSuper,566 cpgs cpgIslandExt,115 cpgIslandExt,152 cpgIslandExtUnmasked,118 cpgIslandExtUnmasked,155 cpgIslandSuper,115 cpgIslandSuper,152 created microsat,89 rmsk,13 uniprot,824 uniprot,1942 credits blastHg18KG,139 cpgIslandExt,584 cpgIslandExtUnmasked,587 cpgIslandSuper,584 est,725 gc5Base,71 intronEst,809 microsat,104 mrna,441 nestedRepeats,302 quality,85 rmsk,325 simpleRepeat,66 uniprot,1938 xenoRefGene,280 criteria cpgIslandExt,261 cpgIslandExtUnmasked,264 cpgIslandSuper,261 est,303 est,321 est,359 est,377 intronEst,384 intronEst,402 intronEst,440 intronEst,458 mrna,249 mrna,267 mrna,305 mrna,323 cs cpgIslandExt,63 cpgIslandExt,101 cpgIslandExt,296 cpgIslandExtUnmasked,66 cpgIslandExtUnmasked,104 cpgIslandExtUnmasked,299 cpgIslandSuper,63 cpgIslandSuper,101 cpgIslandSuper,296 curated uniprot,35 uniprot,110 uniprot,142 xenoRefGene,296 xenoRefGene,373 curator rmsk,261 curr nestedRepeats,384 nestedRepeats,406 rmsk,407 rmsk,429 current est,163 intronEst,244 mrna,109 nestedRepeats,250 uniprot,1296 uniprot,1575 uniprot,1692 uniprot,1712 currently gold,69 cytoplamsic uniprot,518 cytoplasmic unipLocCytopl,1 unipLocCytopl,3 uniprot,276 uniprot,284 uniprot,569 cytosine cpgIslandExt,45 cpgIslandExtUnmasked,48 cpgIslandSuper,45 gc5Base,24 d cpgIslandExt,438 cpgIslandExtUnmasked,441 cpgIslandSuper,438 d23-6 est,796 intronEst,880 mrna,513 d36-42 est,770 intronEst,854 mrna,487 d501-4 xenoRefGene,391 d71-5 uniprot,2005 d756-63 xenoRefGene,357 da est,748 est,776 intronEst,832 intronEst,860 mrna,465 mrna,493 dark unipAliSwissprot,10 uniprot,162 uniprot,582 uniprot,587 xenoRefGene,75 darker intronEst,148 darkly est,69 mrna,50 data cpgIslandExt,403 cpgIslandExt,493 cpgIslandExt,504 cpgIslandExt,525 cpgIslandExtUnmasked,406 cpgIslandExtUnmasked,496 cpgIslandExtUnmasked,507 cpgIslandExtUnmasked,528 cpgIslandSuper,403 cpgIslandSuper,493 cpgIslandSuper,504 cpgIslandSuper,525 est,735 gap,64 gap,155 gc5Base,73 intronEst,819 microsat,47 mrna,452 nestedRepeats,263 nestedRepeats,280 rmsk,126 rmsk,287 uniprot,32 uniprot,45 uniprot,892 uniprot,895 uniprot,1683 uniprot,1705 uniprot,1709 uniprot,1724 uniprot,1837 uniprot,1980 xenoRefGene,36 xenoRefGene,290 database est,768 est,794 intronEst,852 intronEst,878 mrna,485 mrna,511 nestedRepeats,345 quality,99 rmsk,125 rmsk,368 uniprot,25 uniprot,821 uniprot,2003 uniprot,2031 xenoRefGene,355 xenoRefGene,376 xenoRefGene,389 databases est,615 est,742 intronEst,103 intronEst,696 intronEst,826 mrna,459 deamination cpgIslandExt,110 cpgIslandExtUnmasked,113 cpgIslandSuper,110 dec nestedRepeats,389 nestedRepeats,411 rmsk,412 rmsk,434 default cpgIslandExt,195 cpgIslandExtUnmasked,198 cpgIslandSuper,195 uniprot,225 xenoRefGene,103 xenoRefGene,196 defined uniprot,305 uniprot,1387 degraded est,530 intronEst,611 degree est,625 intronEst,706 deletion est,443 intronEst,524 mrna,382 rmsk,220 dense est,61 gold,58 intronEst,145 mrna,42 nestedRepeats,157 nestedRepeats,168 depending uniprot,442 uniprot,808 depicts gap,10 gold,62 deposited est,602 intronEst,683 deprecated uniprot,1044 derived uniprot,830 described nestedRepeats,60 nestedRepeats,338 rmsk,96 rmsk,361 uniprot,1524 description blastHg18KG,13 cpgIslandExt,14 cpgIslandExtUnmasked,17 cpgIslandSuper,14 est,12 est,112 gap,7 gc5Base,11 gold,8 intronEst,13 intronEst,193 microsat,10 mrna,12 mrna,58 nestedRepeats,14 quality,11 rmsk,9 simpleRepeat,11 uniprot,11 uniprot,106 xenoRefGene,11 xenoRefGene,99 designed uniprot,1355 desired est,288 intronEst,369 mrna,234 destined uniprot,244 detailed nestedRepeats,70 rmsk,37 uniprot,692 details rmsk,119 uniprot,499 uniprot,771 uniprot,1157 uniprot,1584 dev cpgIslandExt,419 cpgIslandExtUnmasked,422 cpgIslandSuper,419 nestedRepeats,387 nestedRepeats,409 rmsk,410 rmsk,432 developed cpgIslandExt,595 cpgIslandExtUnmasked,598 cpgIslandSuper,595 dfam rmsk,112 di-nucleotide microsat,3 microsat,32 diekhans uniprot,1540 uniprot,1957 diemand uniprot,2014 differ est,406 intronEst,487 uniprot,746 uniprot,1131 difference uniprot,1251 differences uniprot,374 uniprot,921 uniprot,1370 different gc5Base,50 quality,66 rmsk,149 uniprot,634 dinucleotide cpgIslandExt,240 cpgIslandExtUnmasked,243 cpgIslandSuper,240 dinucleotides cpgIslandExt,282 cpgIslandExt,340 cpgIslandExtUnmasked,285 cpgIslandExtUnmasked,343 cpgIslandSuper,282 cpgIslandSuper,340 direction est,81 est,99 intronEst,162 intronEst,180 directly cpgIslandExt,534 cpgIslandExtUnmasked,537 cpgIslandSuper,534 uniprot,993 directory rmsk,134 discarded xenoRefGene,238 discover blastHg18KG,57 discussion nestedRepeats,364 rmsk,387 disease uniprot,545 uniprot,616 diseases simpleRepeat,54 display est,46 est,54 est,62 est,127 est,154 est,184 est,329 est,353 est,369 est,385 est,395 est,444 gold,121 intronEst,118 intronEst,130 intronEst,138 intronEst,146 intronEst,208 intronEst,235 intronEst,265 intronEst,410 intronEst,434 intronEst,450 intronEst,466 intronEst,476 intronEst,525 mrna,27 mrna,35 mrna,43 mrna,73 mrna,100 mrna,130 mrna,275 mrna,299 mrna,315 mrna,331 mrna,383 nestedRepeats,111 quality,103 rmsk,135 rmsk,141 rmsk,212 uniprot,446 xenoRefGene,43 xenoRefGene,51 xenoRefGene,80 xenoRefGene,116 xenoRefGene,159 displayed cpgIslandExt,204 cpgIslandExtUnmasked,207 cpgIslandSuper,204 gc5Base,54 intronEst,805 nestedRepeats,124 nestedRepeats,217 quality,70 xenoRefGene,204 displays cpgIslandExt,174 cpgIslandExtUnmasked,177 cpgIslandSuper,174 microsat,13 rmsk,145 simpleRepeat,14 distant est,585 intronEst,666 distinguish cpgIslandExt,75 cpgIslandExtUnmasked,78 cpgIslandSuper,75 distinguished gold,75 disulf unipDisulfBond,1 uniprot,472 disulfide unipDisulfBond,4 uniprot,333 uniprot,335 diverged nestedRepeats,212 divided uniprot,56 dj blastHg18KG,164 est,756 est,780 intronEst,840 intronEst,864 mrna,473 mrna,497 dl est,784 intronEst,868 mrna,501 dna cpgIslandExt,60 cpgIslandExt,79 cpgIslandExt,92 cpgIslandExtUnmasked,63 cpgIslandExtUnmasked,82 cpgIslandExtUnmasked,95 cpgIslandSuper,60 cpgIslandSuper,79 cpgIslandSuper,92 microsat,123 nestedRepeats,33 nestedRepeats,41 rmsk,23 rmsk,31 rmsk,174 rmsk,177 rmsk,257 simpleRepeat,83 do cpgIslandExt,140 cpgIslandExtUnmasked,143 cpgIslandSuper,140 uniprot,168 uniprot,1129 doc rmsk,132 dollar cpgIslandExt,425 cpgIslandExt,427 cpgIslandExt,431 cpgIslandExt,433 cpgIslandExt,457 cpgIslandExt,459 cpgIslandExt,461 cpgIslandExt,463 cpgIslandExt,465 cpgIslandExt,468 cpgIslandExt,471 cpgIslandExt,476 cpgIslandExt,479 cpgIslandExt,481 cpgIslandExtUnmasked,428 cpgIslandExtUnmasked,430 cpgIslandExtUnmasked,434 cpgIslandExtUnmasked,436 cpgIslandExtUnmasked,460 cpgIslandExtUnmasked,462 cpgIslandExtUnmasked,464 cpgIslandExtUnmasked,466 cpgIslandExtUnmasked,468 cpgIslandExtUnmasked,471 cpgIslandExtUnmasked,474 cpgIslandExtUnmasked,479 cpgIslandExtUnmasked,482 cpgIslandExtUnmasked,484 cpgIslandSuper,425 cpgIslandSuper,427 cpgIslandSuper,431 cpgIslandSuper,433 cpgIslandSuper,457 cpgIslandSuper,459 cpgIslandSuper,461 cpgIslandSuper,463 cpgIslandSuper,465 cpgIslandSuper,468 cpgIslandSuper,471 cpgIslandSuper,476 cpgIslandSuper,479 cpgIslandSuper,481 domain unipLocExtra,4 domains unipDomain,1 unipDomain,3 unipLocCytopl,4 unipLocTransMemb,4 uniprot,255 uniprot,257 uniprot,266 uniprot,268 uniprot,277 uniprot,279 uniprot,323 uniprot,325 uniprot,331 uniprot,391 uniprot,514 uniprot,516 uniprot,519 uniprot,550 download uniprot,1744 uniprot,1983 downloaded uniprot,1741 uniprot,1777 downloading uniprot,1787 downloads rmsk,76 uniprot,1698 dr xenoRefGene,367 draft gold,13 drastically intronEst,105 drawn gap,75 gold,117 draws uniprot,1532 due uniprot,848 uniprot,919 uniprot,1368 duplicate uniprot,594 duplication cpgIslandExt,95 cpgIslandExtUnmasked,98 cpgIslandSuper,95 during gap,31 gap,137 e uniprot,2021 e.g uniprot,398 uniprot,467 each blastHg18KG,68 cpgIslandExt,239 cpgIslandExt,253 cpgIslandExtUnmasked,242 cpgIslandExtUnmasked,256 cpgIslandSuper,239 cpgIslandSuper,253 est,217 intronEst,298 mrna,163 nestedRepeats,120 quality,22 quality,30 uniprot,151 echo uniprot,1925 edge uniprot,1182 uniprot,1451 effect est,600 intronEst,681 either gap,54 rmsk,273 uniprot,816 uniprot,1398 electronic nestedRepeats,348 rmsk,371 element rmsk,228 elements nestedRepeats,352 nestedRepeats,380 rmsk,3 rmsk,156 rmsk,164 rmsk,169 rmsk,176 rmsk,375 rmsk,403 eliminate est,673 intronEst,754 eliminating intronEst,111 emerged est,570 intronEst,651 end est,520 est,538 est,548 est,589 intronEst,601 intronEst,619 intronEst,629 intronEst,670 rmsk,245 uniprot,126 uniprot,210 uniprot,1823 ends intronEst,92 ensembl uniprot,731 uniprot,834 uniprot,865 entered est,254 est,264 intronEst,335 intronEst,345 mrna,200 mrna,210 entire cpgIslandExt,301 cpgIslandExtUnmasked,304 cpgIslandSuper,301 entirely uniprot,1434 ermolaeva xenoRefGene,330 especially est,155 intronEst,236 mrna,101 est est,11 est,87 est,183 est,451 est,614 est,635 est,687 est,733 intronEst,12 intronEst,62 intronEst,77 intronEst,102 intronEst,128 intronEst,168 intronEst,264 intronEst,532 intronEst,695 intronEst,716 intronEst,768 intronEst,817 mrna,11 ests est,3 est,6 est,23 est,29 est,193 est,298 est,313 est,354 est,372 est,490 est,535 est,546 est,648 est,675 intronEst,2 intronEst,5 intronEst,24 intronEst,40 intronEst,115 intronEst,121 intronEst,156 intronEst,274 intronEst,379 intronEst,394 intronEst,435 intronEst,453 intronEst,571 intronEst,616 intronEst,627 intronEst,729 intronEst,756 et cpgIslandExt,377 cpgIslandExtUnmasked,380 cpgIslandSuper,377 xenoRefGene,340 etc uniprot,479 evaluate uniprot,1461 evaluated cpgIslandExt,257 cpgIslandExtUnmasked,260 cpgIslandSuper,257 even est,609 est,616 intronEst,690 intronEst,697 uniprot,136 every uniprot,1571 evidence gold,56 intronEst,65 evolutionary cpgIslandExt,98 cpgIslandExtUnmasked,101 cpgIslandSuper,98 ew blastHg18KG,162 est,760 intronEst,844 mrna,477 exact uniprot,1622 uniprot,1747 example est,186 est,239 intronEst,267 intronEst,320 mrna,132 mrna,185 rmsk,256 uniprot,1450 uniprot,1811 uniprot,1901 except uniprot,508 exception gap,22 exclude est,134 est,339 est,345 intronEst,215 intronEst,420 intronEst,426 mrna,80 mrna,285 mrna,291 exe cpgIslandExt,578 cpgIslandExtUnmasked,581 cpgIslandSuper,578 uniprot,1918 exist cpgIslandExt,179 cpgIslandExtUnmasked,182 cpgIslandSuper,179 gold,87 exon blastHg18KG,58 blastHg18KG,69 blastHg18KG,103 blastHg18KG,116 exons blastHg18KG,86 exp cpgIslandExt,381 cpgIslandExtUnmasked,384 cpgIslandSuper,381 expansions simpleRepeat,48 expected cpgIslandExt,285 cpgIslandExt,366 cpgIslandExtUnmasked,288 cpgIslandExtUnmasked,369 cpgIslandSuper,285 cpgIslandSuper,366 expense intronEst,109 experimentally uniprot,304 explanation gc5Base,66 quality,80 explored cpgIslandExt,514 cpgIslandExtUnmasked,517 cpgIslandSuper,514 uniprot,1716 expressed est,20 est,194 intronEst,21 intronEst,275 mrna,140 expression cpgIslandExt,11 cpgIslandExt,146 cpgIslandExtUnmasked,14 cpgIslandExtUnmasked,149 cpgIslandSuper,11 cpgIslandSuper,146 extend rmsk,308 extended blastHg18KG,119 extending blastHg18KG,105 extracellular unipLocExtra,1 unipLocExtra,3 uniprot,254 uniprot,262 uniprot,513 uniprot,566 extracted nestedRepeats,23 f xenoRefGene,327 facilitate uniprot,1852 factor est,231 intronEst,312 mrna,177 famiglietti uniprot,2018 families uniprot,1395 family rmsk,249 faq nestedRepeats,298 rmsk,321 uniprot,1839 far uniprot,599 farrell xenoRefGene,332 feature est,389 intronEst,470 mrna,335 uniprot,64 uniprot,524 uniprot,613 xenoRefGene,147 xenoRefGene,180 features uniprot,694 uniprot,1805 xenoRefGene,83 feedback uniprot,1445 uniprot,1961 file cpgIslandExt,583 cpgIslandExtUnmasked,586 cpgIslandSuper,583 uniprot,884 uniprot,1511 uniprot,1614 uniprot,1737 uniprot,1756 filenames uniprot,1748 uniprot,1894 files uniprot,1863 filter est,119 est,168 est,181 est,190 est,237 est,278 est,302 est,320 est,358 est,376 intronEst,200 intronEst,249 intronEst,262 intronEst,271 intronEst,318 intronEst,359 intronEst,383 intronEst,401 intronEst,439 intronEst,457 mrna,65 mrna,114 mrna,127 mrna,136 mrna,183 mrna,224 mrna,248 mrna,266 mrna,304 mrna,322 uniprot,187 uniprot,664 filtered est,341 intronEst,422 mrna,287 uniprot,1480 uniprot,1499 filtering est,280 intronEst,361 mrna,226 uniprot,693 uniprot,912 uniprot,1154 final cpgIslandExt,89 cpgIslandExtUnmasked,92 cpgIslandSuper,89 uniprot,1153 finally blastHg18KG,81 find rmsk,117 finder microsat,94 microsat,107 microsat,118 simpleRepeat,25 simpleRepeat,78 finger uniprot,327 finishing gap,33 first blastHg18KG,36 uniprot,70 fit nestedRepeats,175 fix uniprot,851 flag nestedRepeats,287 rmsk,294 flags nestedRepeats,289 rmsk,296 followed cpgIslandExt,47 cpgIslandExtUnmasked,50 cpgIslandSuper,47 following cpgIslandExt,260 cpgIslandExt,408 cpgIslandExtUnmasked,263 cpgIslandExtUnmasked,411 cpgIslandSuper,260 cpgIslandSuper,408 gap,87 follows est,52 intronEst,136 mrna,33 xenoRefGene,49 for blastHg18KG,149 cpgIslandExt,133 cpgIslandExt,162 cpgIslandExt,242 cpgIslandExt,246 cpgIslandExt,258 cpgIslandExt,309 cpgIslandExt,500 cpgIslandExt,556 cpgIslandExtUnmasked,136 cpgIslandExtUnmasked,165 cpgIslandExtUnmasked,245 cpgIslandExtUnmasked,249 cpgIslandExtUnmasked,261 cpgIslandExtUnmasked,312 cpgIslandExtUnmasked,503 cpgIslandExtUnmasked,559 cpgIslandSuper,133 cpgIslandSuper,162 cpgIslandSuper,242 cpgIslandSuper,246 cpgIslandSuper,258 cpgIslandSuper,309 cpgIslandSuper,500 cpgIslandSuper,556 est,56 est,114 est,185 est,216 est,238 est,411 est,422 est,435 est,483 gc5Base,64 intronEst,116 intronEst,140 intronEst,195 intronEst,266 intronEst,297 intronEst,319 intronEst,492 intronEst,503 intronEst,516 intronEst,564 microsat,95 mrna,37 mrna,60 mrna,131 mrna,162 mrna,184 mrna,348 mrna,361 mrna,374 nestedRepeats,35 nestedRepeats,239 nestedRepeats,293 nestedRepeats,299 nestedRepeats,311 nestedRepeats,362 quality,78 rmsk,25 rmsk,120 rmsk,255 rmsk,300 rmsk,322 rmsk,334 rmsk,385 simpleRepeat,30 simpleRepeat,56 uniprot,75 uniprot,78 uniprot,401 uniprot,405 uniprot,462 uniprot,497 uniprot,532 uniprot,549 uniprot,697 uniprot,739 uniprot,743 uniprot,770 uniprot,842 uniprot,846 uniprot,861 uniprot,886 uniprot,964 uniprot,997 uniprot,1017 uniprot,1023 uniprot,1057 uniprot,1070 uniprot,1097 uniprot,1119 uniprot,1211 uniprot,1238 uniprot,1320 uniprot,1393 uniprot,1427 uniprot,1627 uniprot,1644 uniprot,1651 uniprot,1661 uniprot,1726 uniprot,1782 uniprot,1786 uniprot,1810 uniprot,1833 uniprot,1840 uniprot,1869 uniprot,1977 uniprot,1982 uniprot,2034 xenoRefGene,20 xenoRefGene,53 xenoRefGene,175 form uniprot,1665 formats uniprot,885 uniprot,1865 formula cpgIslandExt,373 cpgIslandExtUnmasked,376 cpgIslandSuper,373 found mrna,416 uniprot,241 uniprot,1128 uniprot,1271 uniprot,1328 uniprot,1557 uniprot,1751 uniprot,1794 fragment gap,92 gap,146 gold,133 fragments est,42 gold,4 intronEst,53 nestedRepeats,3 nestedRepeats,19 nestedRepeats,82 nestedRepeats,101 nestedRepeats,127 nestedRepeats,139 nestedRepeats,191 nestedRepeats,205 nestedRepeats,208 free uniprot,1435 from blastHg18KG,22 blastHg18KG,40 cpgIslandExt,81 cpgIslandExt,496 cpgIslandExt,535 cpgIslandExt,563 cpgIslandExt,574 cpgIslandExtUnmasked,84 cpgIslandExtUnmasked,499 cpgIslandExtUnmasked,538 cpgIslandExtUnmasked,566 cpgIslandExtUnmasked,577 cpgIslandSuper,81 cpgIslandSuper,496 cpgIslandSuper,535 cpgIslandSuper,563 cpgIslandSuper,574 est,407 est,455 est,476 est,586 est,604 est,649 est,732 gap,152 gold,3 intronEst,488 intronEst,536 intronEst,557 intronEst,667 intronEst,685 intronEst,730 intronEst,816 mrna,7 mrna,449 nestedRepeats,24 nestedRepeats,50 nestedRepeats,72 rmsk,86 uniprot,21 uniprot,36 uniprot,115 uniprot,198 uniprot,250 uniprot,557 uniprot,747 uniprot,831 uniprot,890 uniprot,915 uniprot,1507 uniprot,1696 uniprot,1742 uniprot,1772 uniprot,1844 uniprot,1953 uniprot,1962 xenoRefGene,27 xenoRefGene,167 xenoRefGene,287 frommer cpgIslandExt,606 cpgIslandExtUnmasked,609 cpgIslandSuper,606 full nestedRepeats,118 rmsk,140 uniprot,486 uniprot,528 uniprot,540 future rmsk,272 g cpgIslandExt,51 cpgIslandExt,392 cpgIslandExt,597 cpgIslandExtUnmasked,54 cpgIslandExtUnmasked,395 cpgIslandExtUnmasked,600 cpgIslandSuper,51 cpgIslandSuper,392 cpgIslandSuper,597 gc5Base,20 microsat,115 simpleRepeat,75 gap blastHg18KG,94 blastHg18KG,98 est,430 gap,1 gap,2 gap,58 gap,69 gap,82 gap,147 gold,44 intronEst,511 mrna,369 gaps gap,11 gap,18 gap,26 gap,35 gap,91 gap,93 gold,86 gardiner-garden cpgIslandExt,376 cpgIslandExt,604 cpgIslandExtUnmasked,379 cpgIslandExtUnmasked,607 cpgIslandSuper,376 cpgIslandSuper,604 gary microsat,111 simpleRepeat,71 gasteiger uniprot,2020 gattiker uniprot,2016 gbdb uniprot,1815 gc cpgIslandExt,262 cpgIslandExtUnmasked,265 cpgIslandSuper,262 gc5Base,1 gc5Base,3 gc5Base,13 gc5Base,30 genbank est,25 est,650 est,761 est,785 intronEst,26 intronEst,731 intronEst,845 intronEst,869 mrna,8 mrna,23 mrna,387 mrna,478 mrna,502 uniprot,376 gencode uniprot,730 gene blastHg18KG,11 cpgIslandExt,145 cpgIslandExtUnmasked,148 cpgIslandSuper,145 unipAliSwissprot,20 unipAliTrembl,12 unipChain,10 unipConflict,8 unipDisulfBond,8 unipDomain,6 unipInterest,8 unipLocCytopl,7 unipLocExtra,7 unipLocSignal,8 unipLocTransMemb,7 unipModif,9 unipMut,8 unipOther,8 unipRepeat,6 unipStruct,10 uniprot,9 uniprot,732 uniprot,1025 uniprot,1050 uniprot,1059 uniprot,1080 uniprot,1281 uniprot,1394 xenoRefGene,9 xenoRefGene,54 xenoRefGene,108 xenoRefGene,123 xenoRefGene,128 xenoRefGene,156 xenoRefGene,185 gene-rich gc5Base,36 genedx uniprot,1973 general est,532 intronEst,613 generally rmsk,72 uniprot,248 generate est,643 intronEst,724 nestedRepeats,261 nestedRepeats,320 rmsk,343 generated cpgIslandExt,588 cpgIslandExtUnmasked,591 cpgIslandSuper,588 nestedRepeats,282 rmsk,289 xenoRefGene,291 genes blastHg18KG,9 blastHg18KG,27 blastHg18KG,33 blastHg18KG,44 cpgIslandExt,20 cpgIslandExt,23 cpgIslandExtUnmasked,23 cpgIslandExtUnmasked,26 cpgIslandSuper,20 cpgIslandSuper,23 est,45 intronEst,56 simpleRepeat,41 unipAliSwissprot,18 unipAliTrembl,10 unipChain,8 unipConflict,6 unipDisulfBond,6 unipDomain,4 unipInterest,6 unipLocCytopl,5 unipLocExtra,5 unipLocSignal,6 unipLocTransMemb,5 unipModif,7 unipMut,6 unipOther,6 unipRepeat,4 unipStruct,8 uniprot,7 uniprot,1300 xenoRefGene,6 xenoRefGene,7 xenoRefGene,19 xenoRefGene,194 xenoRefGene,202 xenoRefGene,213 genet nestedRepeats,354 nestedRepeats,386 nestedRepeats,408 rmsk,377 rmsk,409 rmsk,431 genetic nestedRepeats,52 rmsk,88 genome blastHg18KG,51 cpgIslandExt,164 cpgIslandExt,302 cpgIslandExtUnmasked,167 cpgIslandExtUnmasked,305 cpgIslandSuper,164 cpgIslandSuper,302 est,28 est,655 est,808 gap,97 gap,140 gold,19 gold,139 intronEst,29 intronEst,39 intronEst,736 intronEst,892 mrna,26 mrna,395 mrna,525 nestedRepeats,405 rmsk,428 unipAliSwissprot,9 unipAliTrembl,9 uniprot,88 uniprot,103 uniprot,120 uniprot,203 uniprot,216 uniprot,609 uniprot,642 uniprot,717 uniprot,749 uniprot,803 uniprot,811 uniprot,910 uniprot,1141 uniprot,1377 uniprot,1494 uniprot,1520 uniprot,1543 uniprot,1730 uniprot,1847 uniprot,1858 uniprot,1891 xenoRefGene,226 xenoRefGene,309 genome.bed uniprot,1935 uniprot,1937 genomes cpgIslandExt,612 cpgIslandExtUnmasked,615 cpgIslandSuper,612 nestedRepeats,369 nestedRepeats,383 rmsk,392 rmsk,406 uniprot,863 uniprot,941 xenoRefGene,378 genomic est,91 est,409 est,610 est,721 intronEst,74 intronEst,172 intronEst,490 intronEst,691 intronEst,802 mrna,346 mrna,437 uniprot,28 uniprot,450 xenoRefGene,164 xenoRefGene,276 genuine intronEst,113 giri nestedRepeats,56 nestedRepeats,310 rmsk,92 rmsk,333 gish blastHg18KG,157 github uniprot,1559 given uniprot,741 uniprot,1235 uniprot,1240 uniprot,1808 glyco uniprot,469 glycosylation uniprot,341 uniprot,584 go est,417 est,438 intronEst,498 intronEst,519 mrna,354 mrna,377 uniprot,1412 xenoRefGene,181 gold gold,81 gold,95 goldenpath uniprot,1907 gr xenoRefGene,323 graph gc5Base,59 gc5Base,78 quality,74 graphical gold,120 quality,102 rmsk,211 greater cpgIslandExt,267 cpgIslandExt,269 cpgIslandExt,274 cpgIslandExtUnmasked,270 cpgIslandExtUnmasked,272 cpgIslandExtUnmasked,277 cpgIslandSuper,267 cpgIslandSuper,269 cpgIslandSuper,274 green cpgIslandExt,10 cpgIslandExtUnmasked,13 cpgIslandSuper,10 nestedRepeats,328 rmsk,351 uniprot,588 uniprot,593 group uniprot,430 grouped gold,31 gs cpgIslandExt,294 cpgIslandExtUnmasked,297 cpgIslandSuper,294 gt cpgIslandExt,422 cpgIslandExt,488 cpgIslandExtUnmasked,425 cpgIslandExtUnmasked,491 cpgIslandSuper,422 cpgIslandSuper,488 intronEst,90 uniprot,907 uniprot,909 uniprot,1930 guanine cpgIslandExt,52 cpgIslandExtUnmasked,55 cpgIslandSuper,52 gc5Base,21 h uniprot,2013 haeussler uniprot,1945 handful uniprot,1180 haplotype uniprot,852 hard cpgIslandExt,416 cpgIslandExtUnmasked,419 cpgIslandSuper,416 hare blastHg18KG,75 blastHg18KG,85 est,2 est,5 est,19 est,647 gold,18 intronEst,4 intronEst,20 intronEst,127 intronEst,728 mrna,2 mrna,5 mrna,20 mrna,389 quality,4 quality,96 xenoRefGene,4 xenoRefGene,25 xenoRefGene,225 hart xenoRefGene,334 has est,117 intronEst,198 mrna,63 nestedRepeats,246 uniprot,33 uniprot,46 uniprot,154 uniprot,606 uniprot,1195 uniprot,1232 uniprot,1381 xenoRefGene,68 have intronEst,7 intronEst,89 nestedRepeats,88 rmsk,69 rmsk,108 uniprot,170 uniprot,302 uniprot,942 uniprot,1000 uniprot,1042 uniprot,1444 having cpgIslandExt,138 cpgIslandExtUnmasked,141 cpgIslandSuper,138 est,694 est,703 intronEst,775 intronEst,784 mrna,410 mrna,419 xenoRefGene,249 xenoRefGene,258 heavily uniprot,1533 height quality,28 heights quality,49 helices uniprot,366 help cpgIslandExt,546 cpgIslandExtUnmasked,549 cpgIslandSuper,546 gc5Base,61 quality,76 helpful est,145 intronEst,226 mrna,91 helps cpgIslandExt,74 cpgIslandExtUnmasked,77 cpgIslandSuper,74 here rmsk,127 uniprot,1795 heterochromatic gap,25 hg18 blastHg18KG,31 hg19 uniprot,847 uniprot,860 hg38 uniprot,700 uniprot,843 uniprot,1177 uniprot,1367 uniprot,1909 hgdownload.soe.ucsc.edu cpgIslandExt,576 cpgIslandExtUnmasked,579 cpgIslandSuper,576 uniprot,1814 uniprot,1906 uniprot,1916 hiatt xenoRefGene,324 hidden uniprot,182 uniprot,223 hide uniprot,659 uniprot,667 xenoRefGene,192 high gc5Base,29 higher cpgIslandExt,157 cpgIslandExtUnmasked,160 cpgIslandSuper,157 rmsk,230 highest est,696 intronEst,777 mrna,412 uniprot,948 uniprot,1113 xenoRefGene,251 highlight est,336 gc5Base,49 intronEst,417 mrna,282 quality,65 highlighted est,306 est,324 intronEst,387 intronEst,405 mrna,252 mrna,270 uniprot,580 highly microsat,40 hillier cpgIslandExt,601 cpgIslandExtUnmasked,604 cpgIslandSuper,601 hiram gc5Base,82 quality,108 horizontal nestedRepeats,130 nestedRepeats,150 housekeeping cpgIslandExt,22 cpgIslandExtUnmasked,25 cpgIslandSuper,22 how rmsk,121 however cpgIslandExt,96 cpgIslandExtUnmasked,99 cpgIslandSuper,96 http cpgIslandExt,575 cpgIslandExtUnmasked,578 cpgIslandSuper,575 nestedRepeats,332 rmsk,355 uniprot,1813 https uniprot,1905 uniprot,1915 hub uniprot,711 uniprot,1672 uniprot,1679 hubley nestedRepeats,308 nestedRepeats,326 rmsk,331 rmsk,349 hum uniprot,2043 human blastHg18KG,1 blastHg18KG,3 blastHg18KG,42 blastHg18KG,50 nestedRepeats,404 rmsk,427 uniprot,699 uniprot,940 uniprot,2040 hybridizes est,500 intronEst,581 i est,754 est,778 intronEst,838 intronEst,862 mrna,471 mrna,495 i.e intronEst,72 id nestedRepeats,10 nestedRepeats,106 uniprot,1026 uniprot,1051 uniprot,1060 uniprot,1282 identical uniprot,1106 uniprot,1144 uniprot,1147 identified blastHg18KG,28 est,700 intronEst,781 xenoRefGene,255 identifying cpgIslandExt,249 cpgIslandExtUnmasked,252 cpgIslandSuper,249 identity est,698 est,706 est,718 intronEst,779 intronEst,787 intronEst,799 microsat,71 mrna,414 mrna,422 mrna,434 nestedRepeats,187 nestedRepeats,222 xenoRefGene,253 xenoRefGene,261 xenoRefGene,273 ids uniprot,1292 if est,279 est,291 est,307 est,343 est,360 gap,44 intronEst,360 intronEst,372 intronEst,388 intronEst,424 intronEst,441 mrna,225 mrna,237 mrna,253 mrna,289 mrna,306 nestedRepeats,137 uniprot,602 uniprot,688 uniprot,1030 uniprot,1077 uniprot,1230 uniprot,1261 uniprot,1323 uniprot,1442 xenoRefGene,205 ignored uniprot,1426 immediately cpgIslandExt,48 cpgIslandExtUnmasked,51 cpgIslandSuper,48 imperfect simpleRepeat,19 important uniprot,900 in blastHg18KG,29 cpgIslandExt,24 cpgIslandExt,58 cpgIslandExt,64 cpgIslandExt,87 cpgIslandExt,180 cpgIslandExt,189 cpgIslandExt,214 cpgIslandExt,297 cpgIslandExt,341 cpgIslandExt,375 cpgIslandExt,610 cpgIslandExtUnmasked,27 cpgIslandExtUnmasked,61 cpgIslandExtUnmasked,67 cpgIslandExtUnmasked,90 cpgIslandExtUnmasked,183 cpgIslandExtUnmasked,192 cpgIslandExtUnmasked,217 cpgIslandExtUnmasked,300 cpgIslandExtUnmasked,344 cpgIslandExtUnmasked,378 cpgIslandExtUnmasked,613 cpgIslandSuper,24 cpgIslandSuper,58 cpgIslandSuper,64 cpgIslandSuper,87 cpgIslandSuper,180 cpgIslandSuper,189 cpgIslandSuper,214 cpgIslandSuper,297 cpgIslandSuper,341 cpgIslandSuper,375 cpgIslandSuper,610 est,24 est,37 est,60 est,151 est,172 est,195 est,205 est,223 est,276 est,398 est,531 est,579 est,689 gap,12 gap,41 gap,111 gap,114 gc5Base,5 gc5Base,26 gc5Base,43 gold,57 gold,118 intronEst,25 intronEst,48 intronEst,86 intronEst,100 intronEst,144 intronEst,232 intronEst,253 intronEst,276 intronEst,286 intronEst,304 intronEst,357 intronEst,479 intronEst,612 intronEst,660 intronEst,770 intronEst,806 microsat,42 microsat,49 mrna,22 mrna,41 mrna,97 mrna,118 mrna,141 mrna,151 mrna,169 mrna,222 mrna,405 nestedRepeats,61 nestedRepeats,64 nestedRepeats,75 nestedRepeats,115 nestedRepeats,156 nestedRepeats,167 nestedRepeats,241 nestedRepeats,339 nestedRepeats,367 nestedRepeats,381 nestedRepeats,402 quality,24 quality,59 rmsk,45 rmsk,63 rmsk,97 rmsk,100 rmsk,128 rmsk,139 rmsk,209 rmsk,270 rmsk,317 rmsk,362 rmsk,390 rmsk,404 rmsk,425 uniprot,67 uniprot,148 uniprot,161 uniprot,177 uniprot,242 uniprot,291 uniprot,313 uniprot,427 uniprot,505 uniprot,509 uniprot,570 uniprot,581 uniprot,586 uniprot,591 uniprot,737 uniprot,755 uniprot,854 uniprot,870 uniprot,882 uniprot,1066 uniprot,1132 uniprot,1151 uniprot,1171 uniprot,1190 uniprot,1199 uniprot,1252 uniprot,1258 uniprot,1272 uniprot,1466 uniprot,1637 uniprot,1663 uniprot,1734 uniprot,1752 uniprot,1849 uniprot,1864 xenoRefGene,244 include est,133 est,338 est,362 intronEst,214 intronEst,419 intronEst,443 mrna,79 mrna,284 mrna,308 rmsk,159 rmsk,172 included blastHg18KG,115 blastHg18KG,138 cpgIslandExt,306 cpgIslandExtUnmasked,309 cpgIslandSuper,306 includes rmsk,198 uniprot,1587 including est,7 intronEst,122 rmsk,188 uniprot,1700 incorrect uniprot,1361 indels microsat,74 indicate est,71 mrna,52 nestedRepeats,153 indicates est,79 intronEst,150 intronEst,160 quality,35 xenoRefGene,60 information blastHg18KG,151 cpgIslandExt,542 cpgIslandExtUnmasked,545 cpgIslandSuper,542 est,78 est,413 est,437 gc5Base,55 intronEst,159 intronEst,494 intronEst,518 microsat,97 mrna,350 mrna,376 nestedRepeats,53 nestedRepeats,301 quality,71 rmsk,89 rmsk,324 simpleRepeat,58 uniprot,678 uniprot,1842 uniprot,2038 xenoRefGene,177 initiate rmsk,316 input uniprot,1952 insertion est,442 intronEst,523 mrna,381 rmsk,223 insertions nestedRepeats,86 nestedRepeats,92 inside uniprot,560 inspection uniprot,1653 instead xenoRefGene,120 institute nestedRepeats,55 rmsk,91 instructions uniprot,1785 integrator cpgIslandExt,526 cpgIslandExtUnmasked,529 cpgIslandSuper,526 uniprot,1725 interactions uniprot,316 interactively cpgIslandExt,515 cpgIslandExtUnmasked,518 cpgIslandSuper,515 uniprot,1717 interest unipInterest,1 unipInterest,5 uniprot,299 international est,739 intronEst,823 mrna,456 internet nestedRepeats,279 interrupted nestedRepeats,1 nestedRepeats,5 nestedRepeats,21 nestedRepeats,90 nestedRepeats,121 interspersed nestedRepeats,36 nestedRepeats,373 nestedRepeats,400 rmsk,26 rmsk,154 rmsk,162 rmsk,396 rmsk,423 into cpgIslandExt,105 cpgIslandExtUnmasked,108 cpgIslandSuper,105 est,255 est,460 est,467 est,612 gold,25 gold,32 intronEst,336 intronEst,541 intronEst,548 intronEst,693 mrna,201 uniprot,57 intractable gap,24 intron est,662 intronEst,71 intronEst,743 introns est,679 intronEst,760 is blastHg18KG,141 cpgIslandExt,56 cpgIslandExt,113 cpgIslandExt,121 cpgIslandExt,130 cpgIslandExt,160 cpgIslandExt,203 cpgIslandExt,321 cpgIslandExt,330 cpgIslandExt,335 cpgIslandExt,347 cpgIslandExt,368 cpgIslandExt,404 cpgIslandExt,494 cpgIslandExtUnmasked,59 cpgIslandExtUnmasked,116 cpgIslandExtUnmasked,124 cpgIslandExtUnmasked,133 cpgIslandExtUnmasked,163 cpgIslandExtUnmasked,206 cpgIslandExtUnmasked,324 cpgIslandExtUnmasked,333 cpgIslandExtUnmasked,338 cpgIslandExtUnmasked,350 cpgIslandExtUnmasked,371 cpgIslandExtUnmasked,407 cpgIslandExtUnmasked,497 cpgIslandSuper,56 cpgIslandSuper,113 cpgIslandSuper,121 cpgIslandSuper,130 cpgIslandSuper,160 cpgIslandSuper,203 cpgIslandSuper,321 cpgIslandSuper,330 cpgIslandSuper,335 cpgIslandSuper,347 cpgIslandSuper,368 cpgIslandSuper,404 cpgIslandSuper,494 est,295 est,311 est,347 est,364 est,453 est,465 est,474 est,494 est,623 est,667 gap,59 gap,66 gap,74 gap,119 gap,129 gc5Base,32 gold,110 gold,116 intronEst,104 intronEst,376 intronEst,392 intronEst,428 intronEst,445 intronEst,534 intronEst,546 intronEst,555 intronEst,575 intronEst,704 intronEst,748 microsat,88 mrna,241 mrna,257 mrna,293 mrna,310 nestedRepeats,59 nestedRepeats,123 nestedRepeats,198 nestedRepeats,219 nestedRepeats,337 rmsk,95 rmsk,360 simpleRepeat,28 uniprot,159 uniprot,222 uniprot,417 uniprot,626 uniprot,707 uniprot,839 uniprot,911 uniprot,958 uniprot,972 uniprot,1052 uniprot,1081 uniprot,1209 uniprot,1245 uniprot,1256 uniprot,1264 uniprot,1283 uniprot,1334 uniprot,1390 uniprot,1564 uniprot,1578 uniprot,1603 uniprot,1630 uniprot,1732 island cpgIslandExt,343 cpgIslandExtUnmasked,346 cpgIslandSuper,343 islands cpgIslandExt,2 cpgIslandExt,4 cpgIslandExt,5 cpgIslandExt,16 cpgIslandExt,27 cpgIslandExt,148 cpgIslandExt,177 cpgIslandExt,226 cpgIslandExt,320 cpgIslandExt,507 cpgIslandExt,609 cpgIslandExtUnmasked,4 cpgIslandExtUnmasked,8 cpgIslandExtUnmasked,19 cpgIslandExtUnmasked,30 cpgIslandExtUnmasked,151 cpgIslandExtUnmasked,180 cpgIslandExtUnmasked,229 cpgIslandExtUnmasked,323 cpgIslandExtUnmasked,510 cpgIslandExtUnmasked,612 cpgIslandSuper,2 cpgIslandSuper,4 cpgIslandSuper,5 cpgIslandSuper,16 cpgIslandSuper,27 cpgIslandSuper,148 cpgIslandSuper,177 cpgIslandSuper,226 cpgIslandSuper,320 cpgIslandSuper,507 cpgIslandSuper,609 isoform unipAliSwissprot,13 uniprot,157 uniprot,186 uniprot,671 isoforms unipAliSwissprot,17 uniprot,145 uniprot,164 isolated est,454 intronEst,535 issue est,769 est,795 intronEst,853 intronEst,879 mrna,486 mrna,512 uniprot,2004 xenoRefGene,356 xenoRefGene,390 it est,93 est,107 est,516 gap,65 intronEst,174 intronEst,188 intronEst,597 uniprot,228 uniprot,625 uniprot,1586 item nestedRepeats,197 xenoRefGene,77 items est,65 est,138 est,148 est,342 intronEst,219 intronEst,229 intronEst,423 mrna,46 mrna,84 mrna,94 mrna,288 nestedRepeats,171 nestedRepeats,180 xenoRefGene,104 its cpgIslandExt,509 cpgIslandExtUnmasked,512 cpgIslandSuper,509 nestedRepeats,204 uniprot,230 uniprot,762 uniprot,1316 uniprot,1348 itself uniprot,715 j blastHg18KG,170 cpgIslandExt,613 cpgIslandExtUnmasked,616 cpgIslandSuper,613 est,758 est,782 intronEst,842 intronEst,866 mrna,475 mrna,499 nestedRepeats,341 rmsk,364 xenoRefGene,335 jan est,766 est,791 intronEst,850 intronEst,875 microsat,129 mrna,483 mrna,508 simpleRepeat,89 uniprot,2001 xenoRefGene,353 xenoRefGene,386 jim blastHg18KG,183 blastHg18KG,196 joined nestedRepeats,7 nestedRepeats,18 nestedRepeats,103 nestedRepeats,128 journal nestedRepeats,349 rmsk,372 jul cpgIslandExt,617 cpgIslandExtUnmasked,620 cpgIslandSuper,617 jurka nestedRepeats,62 nestedRepeats,340 rmsk,98 rmsk,363 k est,752 intronEst,836 mrna,469 k1 cpgIslandExt,484 cpgIslandExtUnmasked,487 cpgIslandSuper,484 k2 cpgIslandExt,486 cpgIslandExtUnmasked,489 cpgIslandSuper,486 karsch-mizrachi est,753 est,777 intronEst,837 intronEst,861 mrna,470 mrna,494 kd xenoRefGene,321 xenoRefGene,363 keep cpgIslandExt,125 cpgIslandExtUnmasked,128 cpgIslandSuper,125 uniprot,1486 kent blastHg18KG,184 blastHg18KG,197 est,801 intronEst,885 mrna,518 xenoRefGene,303 kept est,724 mrna,440 xenoRefGene,279 km xenoRefGene,339 known blastHg18KG,26 gold,35 gold,112 xenoRefGene,15 l cpgIslandExt,600 cpgIslandExtUnmasked,603 cpgIslandSuper,600 label xenoRefGene,101 xenoRefGene,113 xenoRefGene,136 labeled nestedRepeats,132 uniprot,457 xenoRefGene,106 labeling est,387 intronEst,468 labels nestedRepeats,161 xenoRefGene,78 landrum xenoRefGene,336 large quality,46 larger intronEst,152 least blastHg18KG,128 est,715 intronEst,68 intronEst,83 intronEst,796 microsat,29 microsat,78 mrna,431 xenoRefGene,270 lee uniprot,1955 length cpgIslandExt,268 cpgIslandExt,360 cpgIslandExt,395 cpgIslandExtUnmasked,271 cpgIslandExtUnmasked,363 cpgIslandExtUnmasked,398 cpgIslandSuper,268 cpgIslandSuper,360 cpgIslandSuper,395 est,38 est,663 intronEst,49 intronEst,87 intronEst,744 less uniprot,680 xenoRefGene,234 level est,707 intronEst,97 intronEst,788 mrna,423 rmsk,205 xenoRefGene,62 xenoRefGene,262 levels cpgIslandExt,158 cpgIslandExtUnmasked,161 cpgIslandSuper,158 libraries est,560 intronEst,641 nestedRepeats,258 nestedRepeats,317 rmsk,340 library nestedRepeats,47 rmsk,83 lifted uniprot,1492 lifting uniprot,1843 liftover uniprot,887 uniprot,1878 uniprot,1897 uniprot,1920 uniprot,1924 uniprot,1932 light cpgIslandExt,9 cpgIslandExtUnmasked,12 cpgIslandSuper,9 unipAliSwissprot,14 uniprot,506 uniprot,592 xenoRefGene,71 light-blue uniprot,178 lighter rmsk,237 like uniprot,1541 likely microsat,17 line gap,73 gold,115 nestedRepeats,151 rmsk,165 uniprot,1872 uniprot,1876 lines nestedRepeats,131 link gc5Base,63 quality,77 uniprot,491 uniprot,1675 linux.x86_64 cpgIslandExt,579 cpgIslandExtUnmasked,582 cpgIslandSuper,579 uniprot,1919 lipid uniprot,346 lipman blastHg18KG,163 est,755 est,779 intronEst,839 intronEst,863 mrna,472 mrna,496 lipoification uniprot,577 list est,212 intronEst,293 mrna,158 uniprot,979 uniprot,1165 uniprot,1831 literature uniprot,434 lm uniprot,2019 local blastHg18KG,166 nestedRepeats,98 located simpleRepeat,21 location uniprot,554 uniprot,767 uniprot,1417 locations gap,3 uniprot,451 logic est,290 intronEst,371 mrna,236 long est,678 intronEst,759 rmsk,161 rmsk,166 lot uniprot,1950 low nestedRepeats,39 rmsk,29 rmsk,181 ls-snp uniprot,1536 ltr rmsk,170 m cpgIslandExt,605 cpgIslandExt,607 cpgIslandExtUnmasked,608 cpgIslandExtUnmasked,610 cpgIslandSuper,605 cpgIslandSuper,607 est,750 intronEst,834 mrna,467 made rmsk,110 uniprot,931 uniprot,938 maglott xenoRefGene,366 mailing uniprot,1830 main unipAliSwissprot,12 uniprot,156 uniprot,1548 maintained uniprot,719 make blastHg18KG,66 est,449 est,515 gold,66 intronEst,530 intronEst,596 rmsk,123 uniprot,1406 makedb rmsk,131 making uniprot,1978 mammalian nestedRepeats,368 nestedRepeats,382 rmsk,391 rmsk,405 xenoRefGene,346 manner uniprot,1469 manual uniprot,1652 many est,147 gap,15 intronEst,112 intronEst,228 mrna,93 uniprot,932 uniprot,1124 map uniprot,758 uniprot,1885 mapped blastHg18KG,5 nestedRepeats,233 uniprot,26 uniprot,97 uniprot,117 uniprot,132 uniprot,200 uniprot,213 uniprot,632 uniprot,1517 mapping gap,4 gc5Base,8 gold,5 quality,8 uniprot,725 uniprot,752 uniprot,775 uniprot,904 uniprot,1213 uniprot,1322 uniprot,1613 uniprot,1853 mappings uniprot,1362 mark est,536 intronEst,617 uniprot,1539 uniprot,1956 markers microsat,23 masked cpgIslandExt,192 cpgIslandExt,198 cpgIslandExt,328 cpgIslandExtUnmasked,195 cpgIslandExtUnmasked,201 cpgIslandExtUnmasked,331 cpgIslandSuper,192 cpgIslandSuper,198 cpgIslandSuper,328 rmsk,71 masking cpgIslandExt,304 cpgIslandExtUnmasked,307 cpgIslandSuper,304 maskoutfa cpgIslandExt,414 cpgIslandExtUnmasked,417 cpgIslandSuper,414 match est,84 est,300 est,315 est,356 est,374 intronEst,165 intronEst,381 intronEst,396 intronEst,437 intronEst,455 mrna,246 mrna,261 mrna,302 mrna,320 uniprot,1305 uniprot,1341 matched blastHg18KG,126 matches est,72 mrna,53 matching est,90 intronEst,171 uniprot,1068 uniprot,1075 mature est,506 intronEst,587 unipChain,3 uniprot,251 uniprot,292 maximally cpgIslandExt,250 cpgIslandExtUnmasked,253 cpgIslandSuper,250 maximilian uniprot,1944 maximum blastHg18KG,93 est,661 intronEst,742 may cpgIslandExt,36 cpgIslandExtUnmasked,39 cpgIslandSuper,36 est,143 est,262 est,272 est,380 est,431 est,511 est,513 est,525 est,527 est,547 est,672 gap,28 gc5Base,40 intronEst,224 intronEst,343 intronEst,353 intronEst,461 intronEst,512 intronEst,592 intronEst,594 intronEst,606 intronEst,608 intronEst,628 intronEst,753 mrna,89 mrna,208 mrna,218 mrna,326 mrna,370 nestedRepeats,268 nestedRepeats,290 quality,56 rmsk,297 rmsk,307 simpleRepeat,43 uniprot,2046 mcgarvey xenoRefGene,338 md5 uniprot,1601 mdash est,485 est,489 gap,19 gap,27 intronEst,566 intronEst,570 mediating uniprot,314 medium xenoRefGene,73 mementos nestedRepeats,377 rmsk,400 menu xenoRefGene,174 method uniprot,726 uniprot,753 uniprot,776 methods blastHg18KG,35 cpgIslandExt,224 cpgIslandExtUnmasked,227 cpgIslandSuper,224 est,447 intronEst,528 microsat,45 mrna,386 nestedRepeats,244 rmsk,286 simpleRepeat,55 uniprot,777 xenoRefGene,217 methylated cpgIslandExt,71 cpgIslandExt,100 cpgIslandExt,132 cpgIslandExtUnmasked,74 cpgIslandExtUnmasked,103 cpgIslandExtUnmasked,135 cpgIslandSuper,71 cpgIslandSuper,100 cpgIslandSuper,132 methylation cpgIslandExt,73 cpgIslandExtUnmasked,76 cpgIslandSuper,73 micro-satellites rmsk,180 microsatellite microsat,1 microsat,22 microsatellites microsat,2 might est,108 est,681 intronEst,189 intronEst,762 miklem cpgIslandExt,598 cpgIslandExtUnmasked,601 cpgIslandSuper,598 miller blastHg18KG,159 mismatch rmsk,218 misplacements uniprot,853 mj xenoRefGene,337 mode est,63 est,128 gold,59 intronEst,147 intronEst,209 mrna,44 mrna,74 nestedRepeats,119 nestedRepeats,160 nestedRepeats,169 rmsk,142 models uniprot,733 modification cpgIslandExt,591 cpgIslandExtUnmasked,594 cpgIslandSuper,591 modifications unipModif,2 unipModif,6 uniprot,340 uniprot,574 modified rmsk,57 uniprot,343 modsnp uniprot,2030 moiety-binding uniprot,347 mol blastHg18KG,171 cpgIslandExt,614 cpgIslandExtUnmasked,617 cpgIslandSuper,614 months uniprot,1573 more blastHg18KG,107 blastHg18KG,150 cpgIslandExt,541 cpgIslandExtUnmasked,544 cpgIslandSuper,541 est,68 est,175 est,282 est,412 est,436 intronEst,256 intronEst,363 intronEst,493 intronEst,517 microsat,96 mrna,49 mrna,121 mrna,228 mrna,349 mrna,375 nestedRepeats,211 nestedRepeats,300 rmsk,323 simpleRepeat,57 uniprot,498 uniprot,691 uniprot,984 uniprot,1841 xenoRefGene,176 most est,484 intronEst,565 nestedRepeats,249 uniprot,683 uniprot,756 uniprot,1295 uniprot,1391 mostly uniprot,1365 motifs uniprot,388 mouse uniprot,521 uniprot,535 mrna est,9 est,507 est,523 est,606 intronEst,10 intronEst,588 intronEst,604 intronEst,687 mrna,9 mrna,14 mrna,129 mrna,403 mrna,443 mrna,450 mrnas mrna,3 mrna,6 mrna,21 mrna,139 mrna,244 mrna,259 mrna,300 mrna,318 mrna,343 mrna,390 much nestedRepeats,210 mujica uniprot,1967 multiple est,260 est,690 intronEst,341 intronEst,771 mrna,206 mrna,406 uniprot,58 uniprot,1067 uniprot,1095 xenoRefGene,245 must intronEst,63 intronEst,80 mutagenesis uniprot,353 mutat uniprot,2044 mutated uniprot,618 mutation-related uniprot,408 mutations unipMut,1 unipMut,5 uniprot,352 myers blastHg18KG,161 mysql cpgIslandExt,538 cpgIslandExtUnmasked,541 cpgIslandSuper,538 n cpgIslandExt,386 cpgIslandExt,394 cpgIslandExt,456 cpgIslandExtUnmasked,389 cpgIslandExtUnmasked,397 cpgIslandExtUnmasked,459 cpgIslandSuper,386 cpgIslandSuper,394 cpgIslandSuper,456 name est,201 intronEst,282 mrna,147 nestedRepeats,136 uniprot,105 uniprot,461 uniprot,541 uniprot,1577 xenoRefGene,109 xenoRefGene,119 xenoRefGene,124 names xenoRefGene,131 nbci uniprot,822 ncbi blastHg18KG,145 uniprot,840 uniprot,856 uniprot,1024 uniprot,1046 uniprot,1049 uniprot,1079 uniprot,1204 uniprot,1274 uniprot,1280 uniprot,1289 uniprot,1299 xenoRefGene,29 xenoRefGene,299 xenoRefGene,368 near cpgIslandExt,31 cpgIslandExtUnmasked,34 cpgIslandSuper,31 newer est,558 intronEst,639 nestedRepeats,270 rmsk,106 newly cpgIslandExt,77 cpgIslandExtUnmasked,80 cpgIslandSuper,77 next blastHg18KG,60 no blastHg18KG,97 est,95 intronEst,176 microsat,73 uniprot,1031 uniprot,1078 uniprot,1262 uniprot,1324 nomask cpgIslandExt,498 cpgIslandExtUnmasked,501 cpgIslandSuper,498 non-coding xenoRefGene,193 non-mrna est,627 intronEst,708 non-protein-coding xenoRefGene,18 xenoRefGene,201 non-redundant xenoRefGene,374 non-sea xenoRefGene,3 normally cpgIslandExt,42 cpgIslandExtUnmasked,45 cpgIslandSuper,42 not cpgIslandExt,131 cpgIslandExt,186 cpgIslandExtUnmasked,134 cpgIslandExtUnmasked,189 cpgIslandSuper,131 cpgIslandSuper,186 est,352 est,487 est,514 est,528 intronEst,433 intronEst,568 intronEst,595 intronEst,609 mrna,298 rmsk,113 rmsk,313 uniprot,169 uniprot,627 uniprot,959 uniprot,1130 uniprot,1455 note est,658 intronEst,739 nestedRepeats,264 uniprot,695 now uniprot,1680 ns gap,110 nuclear rmsk,155 rmsk,163 nucleic est,762 est,787 intronEst,846 intronEst,871 microsat,125 mrna,479 mrna,504 simpleRepeat,85 uniprot,1997 xenoRefGene,349 xenoRefGene,382 nucleotide cpgIslandExt,352 cpgIslandExtUnmasked,355 cpgIslandSuper,352 number cpgIslandExt,279 cpgIslandExt,286 cpgIslandExt,292 cpgIslandExt,337 cpgIslandExt,383 cpgIslandExt,387 cpgIslandExt,390 cpgIslandExtUnmasked,282 cpgIslandExtUnmasked,289 cpgIslandExtUnmasked,295 cpgIslandExtUnmasked,340 cpgIslandExtUnmasked,386 cpgIslandExtUnmasked,390 cpgIslandExtUnmasked,393 cpgIslandSuper,279 cpgIslandSuper,286 cpgIslandSuper,292 cpgIslandSuper,337 cpgIslandSuper,383 cpgIslandSuper,387 cpgIslandSuper,390 intronEst,153 rmsk,233 numbers gap,108 o xenoRefGene,331 obs cpgIslandExt,380 cpgIslandExtUnmasked,383 cpgIslandSuper,380 observed cpgIslandExt,278 cpgIslandExt,364 cpgIslandExtUnmasked,281 cpgIslandExtUnmasked,367 cpgIslandSuper,278 cpgIslandSuper,364 uniprot,1114 obtain uniprot,1803 obtained cpgIslandExt,562 cpgIslandExt,573 cpgIslandExtUnmasked,565 cpgIslandExtUnmasked,576 cpgIslandSuper,562 cpgIslandSuper,573 uniprot,1506 uniprot,1695 occur simpleRepeat,36 oct blastHg18KG,174 of blastHg18KG,19 blastHg18KG,110 blastHg18KG,122 blastHg18KG,130 blastHg18KG,143 cpgIslandExt,91 cpgIslandExt,108 cpgIslandExt,144 cpgIslandExt,171 cpgIslandExt,200 cpgIslandExt,221 cpgIslandExt,264 cpgIslandExt,277 cpgIslandExt,280 cpgIslandExt,290 cpgIslandExt,293 cpgIslandExt,312 cpgIslandExt,338 cpgIslandExt,350 cpgIslandExt,363 cpgIslandExt,384 cpgIslandExt,388 cpgIslandExt,391 cpgIslandExt,396 cpgIslandExt,400 cpgIslandExt,592 cpgIslandExtUnmasked,94 cpgIslandExtUnmasked,111 cpgIslandExtUnmasked,147 cpgIslandExtUnmasked,174 cpgIslandExtUnmasked,203 cpgIslandExtUnmasked,224 cpgIslandExtUnmasked,267 cpgIslandExtUnmasked,280 cpgIslandExtUnmasked,283 cpgIslandExtUnmasked,293 cpgIslandExtUnmasked,296 cpgIslandExtUnmasked,315 cpgIslandExtUnmasked,341 cpgIslandExtUnmasked,353 cpgIslandExtUnmasked,366 cpgIslandExtUnmasked,387 cpgIslandExtUnmasked,391 cpgIslandExtUnmasked,394 cpgIslandExtUnmasked,399 cpgIslandExtUnmasked,403 cpgIslandExtUnmasked,595 cpgIslandSuper,91 cpgIslandSuper,108 cpgIslandSuper,144 cpgIslandSuper,171 cpgIslandSuper,200 cpgIslandSuper,221 cpgIslandSuper,264 cpgIslandSuper,277 cpgIslandSuper,280 cpgIslandSuper,290 cpgIslandSuper,293 cpgIslandSuper,312 cpgIslandSuper,338 cpgIslandSuper,350 cpgIslandSuper,363 cpgIslandSuper,384 cpgIslandSuper,388 cpgIslandSuper,391 cpgIslandSuper,396 cpgIslandSuper,400 cpgIslandSuper,592 est,43 est,73 est,82 est,100 est,102 est,137 est,176 est,202 est,213 est,249 est,318 est,428 est,505 est,521 est,539 est,556 est,618 est,626 est,630 est,710 gap,16 gap,23 gap,50 gap,56 gap,90 gap,100 gap,109 gap,122 gap,132 gc5Base,19 gc5Base,46 gc5Base,52 gc5Base,67 gc5Base,76 gold,15 gold,79 gold,104 gold,132 intronEst,33 intronEst,54 intronEst,66 intronEst,98 intronEst,110 intronEst,119 intronEst,154 intronEst,163 intronEst,181 intronEst,183 intronEst,218 intronEst,257 intronEst,283 intronEst,294 intronEst,330 intronEst,399 intronEst,509 intronEst,586 intronEst,602 intronEst,620 intronEst,637 intronEst,699 intronEst,707 intronEst,711 intronEst,791 microsat,27 microsat,55 microsat,64 microsat,81 mrna,54 mrna,83 mrna,122 mrna,148 mrna,159 mrna,195 mrna,264 mrna,367 mrna,426 nestedRepeats,4 nestedRepeats,20 nestedRepeats,27 nestedRepeats,48 nestedRepeats,83 nestedRepeats,93 nestedRepeats,108 nestedRepeats,189 nestedRepeats,195 nestedRepeats,203 nestedRepeats,228 nestedRepeats,252 nestedRepeats,350 nestedRepeats,365 nestedRepeats,378 nestedRepeats,399 quality,21 quality,32 quality,38 quality,62 quality,68 quality,81 quality,93 rmsk,39 rmsk,59 rmsk,84 rmsk,151 rmsk,206 rmsk,216 rmsk,234 rmsk,246 rmsk,264 rmsk,373 rmsk,388 rmsk,401 rmsk,422 simpleRepeat,40 unipAliSwissprot,5 unipAliTrembl,5 unipInterest,4 uniprot,83 uniprot,269 uniprot,298 uniprot,310 uniprot,385 uniprot,407 uniprot,420 uniprot,452 uniprot,465 uniprot,542 uniprot,561 uniprot,652 uniprot,677 uniprot,877 uniprot,902 uniprot,980 uniprot,1111 uniprot,1125 uniprot,1159 uniprot,1166 uniprot,1181 uniprot,1288 uniprot,1298 uniprot,1306 uniprot,1315 uniprot,1347 uniprot,1360 uniprot,1363 uniprot,1397 uniprot,1436 uniprot,1457 uniprot,1590 uniprot,1594 uniprot,1639 uniprot,1646 uniprot,1656 uniprot,1666 uniprot,1684 uniprot,1687 uniprot,1710 uniprot,1951 xenoRefGene,63 xenoRefGene,82 xenoRefGene,96 xenoRefGene,121 xenoRefGene,233 xenoRefGene,265 xenoRefGene,377 off xenoRefGene,134 older uniprot,1560 uniprot,1647 oligo-dt est,498 intronEst,579 omitted nestedRepeats,165 on blastHg18KG,152 cpgIslandExt,287 cpgIslandExt,323 cpgIslandExt,544 cpgIslandExt,551 cpgIslandExtUnmasked,5 cpgIslandExtUnmasked,290 cpgIslandExtUnmasked,326 cpgIslandExtUnmasked,547 cpgIslandExtUnmasked,554 cpgIslandSuper,287 cpgIslandSuper,323 cpgIslandSuper,544 cpgIslandSuper,551 est,232 est,281 gap,53 gold,53 intronEst,313 intronEst,362 mrna,178 mrna,227 nestedRepeats,141 nestedRepeats,176 nestedRepeats,277 rmsk,74 uniprot,19 uniprot,61 uniprot,129 uniprot,172 uniprot,232 uniprot,443 uniprot,482 uniprot,648 uniprot,728 uniprot,772 uniprot,809 uniprot,859 uniprot,1035 uniprot,1139 uniprot,1176 uniprot,1366 uniprot,1446 uniprot,1534 uniprot,1558 uniprot,1567 uniprot,1581 uniprot,1605 uniprot,1887 uniprot,2039 xenoRefGene,345 once est,266 intronEst,347 mrna,212 uniprot,647 one cpgIslandExt,233 cpgIslandExtUnmasked,236 cpgIslandSuper,233 est,173 est,284 est,317 intronEst,69 intronEst,254 intronEst,365 intronEst,398 mrna,119 mrna,230 mrna,263 uniprot,74 uniprot,77 uniprot,155 uniprot,981 uniprot,1098 uniprot,1638 ones uniprot,1041 ongoing uniprot,1569 only cpgIslandExt,196 cpgIslandExtUnmasked,199 cpgIslandSuper,196 est,157 est,297 est,370 est,403 est,701 intronEst,238 intronEst,378 intronEst,451 intronEst,484 intronEst,782 microsat,61 mrna,103 mrna,243 mrna,316 mrna,417 uniprot,645 uniprot,975 uniprot,1178 uniprot,1302 uniprot,1804 xenoRefGene,210 xenoRefGene,256 open-3.0 nestedRepeats,331 rmsk,354 opin nestedRepeats,385 nestedRepeats,407 rmsk,408 rmsk,430 option est,416 intronEst,497 mrna,353 xenoRefGene,114 xenoRefGene,166 optional xenoRefGene,144 options est,445 gc5Base,70 intronEst,526 mrna,384 quality,84 or blastHg18KG,198 cpgIslandExt,127 cpgIslandExt,266 cpgIslandExt,523 cpgIslandExtUnmasked,130 cpgIslandExtUnmasked,269 cpgIslandExtUnmasked,526 cpgIslandSuper,127 cpgIslandSuper,266 cpgIslandSuper,523 est,174 est,309 est,328 est,337 est,402 est,480 est,512 est,526 intronEst,255 intronEst,390 intronEst,409 intronEst,418 intronEst,483 intronEst,561 intronEst,593 intronEst,607 mrna,120 mrna,255 mrna,274 mrna,283 nestedRepeats,96 nestedRepeats,117 nestedRepeats,158 rmsk,251 rmsk,280 uniprot,317 uniprot,389 uniprot,436 uniprot,829 uniprot,888 uniprot,982 uniprot,1038 uniprot,1205 uniprot,1266 uniprot,1401 uniprot,1449 uniprot,1722 uniprot,1776 uniprot,1835 uniprot,1879 xenoRefGene,132 order gap,47 gold,41 gold,101 uniprot,872 ordered gap,134 organ est,198 est,204 intronEst,279 intronEst,285 mrna,144 mrna,150 organism-specific blastHg18KG,92 organisms nestedRepeats,295 rmsk,302 uniprot,998 xenoRefGene,21 orientation gap,49 gold,42 gold,103 oriented gap,136 origin nestedRepeats,398 rmsk,421 original nestedRepeats,84 ostell est,757 est,781 intronEst,841 intronEst,865 mrna,474 mrna,498 other cpgIslandExt,135 cpgIslandExtUnmasked,138 cpgIslandSuper,135 nestedRepeats,376 rmsk,195 rmsk,399 unipOther,1 unipOther,4 uniprot,90 uniprot,122 uniprot,205 uniprot,319 uniprot,393 uniprot,396 uniprot,862 uniprot,1200 xenoRefGene,1 xenoRefGene,22 others cpgIslandExt,247 cpgIslandExtUnmasked,250 cpgIslandSuper,247 nestedRepeats,214 uniprot,1312 uniprot,1344 otherwise cpgIslandExt,185 cpgIslandExtUnmasked,188 cpgIslandSuper,185 est,682 intronEst,763 our cpgIslandExt,536 cpgIslandExt,545 cpgIslandExt,552 cpgIslandExtUnmasked,539 cpgIslandExtUnmasked,548 cpgIslandExtUnmasked,555 cpgIslandSuper,536 cpgIslandSuper,545 cpgIslandSuper,552 rmsk,124 rmsk,129 uniprot,891 uniprot,1697 uniprot,1765 uniprot,1829 uniprot,1836 uniprot,1870 uniprot,1874 out quality,43 output cpgIslandExt,499 cpgIslandExtUnmasked,502 cpgIslandSuper,499 nestedRepeats,26 nestedRepeats,110 outputs rmsk,35 outside est,617 intronEst,698 uniprot,558 over blastHg18KG,106 blastHg18KG,120 cpgIslandExt,97 cpgIslandExtUnmasked,100 cpgIslandSuper,97 uniprot,522 uniprot,536 overlapping gap,123 own uniprot,724 p nestedRepeats,329 rmsk,352 pack nestedRepeats,116 page cpgIslandExt,223 cpgIslandExt,547 cpgIslandExtUnmasked,226 cpgIslandExtUnmasked,550 cpgIslandSuper,223 cpgIslandSuper,547 est,113 est,425 est,446 intronEst,194 intronEst,506 intronEst,527 mrna,59 mrna,364 mrna,385 rmsk,77 uniprot,236 uniprot,651 uniprot,1158 uniprot,1585 uniprot,2027 xenoRefGene,100 xenoRefGene,191 pair gap,63 gap,154 paired-end gap,144 gold,54 parent cpgIslandExt,83 cpgIslandExtUnmasked,86 cpgIslandSuper,83 part blastHg18KG,142 quality,92 particular uniprot,1019 particularly cpgIslandExt,21 cpgIslandExtUnmasked,24 cpgIslandSuper,21 past uniprot,1690 patch uniprot,1423 patches uniprot,1432 penalty blastHg18KG,99 peptide unipLocSignal,2 uniprot,477 uniprot,565 peptides blastHg18KG,21 unipLocSignal,5 uniprot,239 uniprot,512 percent gc5Base,2 gc5Base,4 gc5Base,14 percentage cpgIslandExt,345 cpgIslandExtUnmasked,348 cpgIslandSuper,345 gc5Base,18 perfect microsat,31 performed cpgIslandExt,405 cpgIslandExtUnmasked,408 cpgIslandSuper,405 perhaps cpgIslandExt,137 cpgIslandExtUnmasked,140 cpgIslandSuper,137 est,608 intronEst,689 period microsat,65 permitted rmsk,314 pharmaceuticals uniprot,1969 phenotype uniprot,432 phosphorylation uniprot,590 pia uniprot,1971 pick uniprot,1089 pipeline uniprot,1537 pipelines uniprot,1850 places est,691 intronEst,772 mrna,407 xenoRefGene,246 plasmid est,469 intronEst,550 please uniprot,685 uniprot,1439 uniprot,1826 pmc est,773 est,799 est,817 intronEst,857 intronEst,883 intronEst,901 microsat,136 mrna,490 mrna,516 mrna,534 simpleRepeat,96 uniprot,2008 xenoRefGene,318 xenoRefGene,360 xenoRefGene,394 pmc148217 microsat,137 simpleRepeat,97 pmc187518 est,818 intronEst,902 mrna,535 xenoRefGene,319 pmc308779 est,800 intronEst,884 mrna,517 pmc3245120 uniprot,2009 pmc3531190 est,774 intronEst,858 mrna,491 pmc3965018 xenoRefGene,361 pmc539979 xenoRefGene,395 pmid cpgIslandExt,622 cpgIslandExtUnmasked,625 cpgIslandSuper,622 est,771 est,797 est,815 intronEst,855 intronEst,881 intronEst,899 microsat,134 mrna,488 mrna,514 mrna,532 nestedRepeats,360 nestedRepeats,393 nestedRepeats,415 rmsk,383 rmsk,416 rmsk,438 simpleRepeat,94 uniprot,2006 uniprot,2050 xenoRefGene,316 xenoRefGene,358 xenoRefGene,392 point est,551 intronEst,632 rmsk,269 poly-a est,503 est,577 intronEst,584 intronEst,658 polymorphic microsat,41 simpleRepeat,46 polypeptide unipChain,6 uniprot,287 uniprot,289 population microsat,44 position quality,31 uniprot,610 positions uniprot,1495 possible gold,28 uniprot,601 possibly simpleRepeat,18 post-processing uniprot,295 potential cpgIslandExt,175 cpgIslandExtUnmasked,178 cpgIslandSuper,175 precompiled uniprot,1780 predicted blastHg18KG,24 blastHg18KG,38 cpgIslandExt,228 cpgIslandExtUnmasked,231 cpgIslandSuper,228 uniprot,48 uniprot,193 xenoRefGene,70 prediction xenoRefGene,55 predictions blastHg18KG,12 unipAliSwissprot,21 unipAliTrembl,13 unipChain,11 unipConflict,9 unipDisulfBond,9 unipDomain,7 unipInterest,9 unipLocCytopl,8 unipLocExtra,8 unipLocSignal,9 unipLocTransMemb,8 unipModif,10 unipMut,9 unipOther,9 unipRepeat,7 unipStruct,11 uniprot,10 xenoRefGene,10 xenoRefGene,157 xenoRefGene,186 prepared gc5Base,80 uniprot,712 present cpgIslandExt,154 cpgIslandExtUnmasked,157 cpgIslandSuper,154 rmsk,44 presentation gc5Base,75 pressure cpgIslandExt,123 cpgIslandExtUnmasked,126 cpgIslandSuper,123 previous uniprot,1654 primary unipStruct,4 uniprot,360 primed est,495 intronEst,576 primer est,482 intronEst,563 priming est,578 intronEst,659 principal gap,88 printf cpgIslandExt,435 cpgIslandExtUnmasked,438 cpgIslandSuper,435 problem uniprot,1359 uniprot,1389 procedure uniprot,990 process gap,34 gap,142 uniprot,321 uniprot,879 uniprot,905 uniprot,1229 uniprot,1448 produce blastHg18KG,190 produced est,729 intronEst,813 mrna,446 xenoRefGene,284 products unipChain,5 program blastHg18KG,55 blastHg18KG,80 cpgIslandExt,559 cpgIslandExt,569 cpgIslandExt,594 cpgIslandExtUnmasked,562 cpgIslandExtUnmasked,572 cpgIslandExtUnmasked,597 cpgIslandSuper,559 cpgIslandSuper,569 cpgIslandSuper,594 microsat,100 microsat,120 mrna,399 nestedRepeats,30 rmsk,20 rmsk,34 simpleRepeat,62 simpleRepeat,80 uniprot,1529 programs uniprot,1877 project xenoRefGene,301 projected uniprot,800 projects est,572 est,591 est,621 intronEst,653 intronEst,672 intronEst,702 promoter cpgIslandExt,40 cpgIslandExtUnmasked,43 cpgIslandSuper,40 pronounced uniprot,1392 proofreading cpgIslandExt,93 cpgIslandExtUnmasked,96 cpgIslandSuper,93 prot.bed uniprot,1931 uniprot,1933 protein blastHg18KG,113 blastHg18KG,132 unipChain,4 unipStruct,3 uniprot,5 uniprot,15 uniprot,84 uniprot,95 uniprot,111 uniprot,113 uniprot,137 uniprot,153 uniprot,194 uniprot,196 uniprot,252 uniprot,256 uniprot,267 uniprot,278 uniprot,293 uniprot,324 uniprot,359 uniprot,635 uniprot,672 uniprot,742 uniprot,760 uniprot,780 uniprot,790 uniprot,906 uniprot,916 uniprot,954 uniprot,966 uniprot,970 uniprot,1020 uniprot,1037 uniprot,1072 uniprot,1099 uniprot,1218 uniprot,1241 uniprot,1244 uniprot,1333 uniprot,1607 uniprot,1635 uniprot,1854 uniprot,1888 uniprot,1989 uniprot,1994 uniprot,2041 protein-coding xenoRefGene,16 xenoRefGene,199 protein-genome uniprot,875 uniprot,1174 protein-protein uniprot,315 protein-to-genome uniprot,1703 proteins blastHg18KG,2 blastHg18KG,4 blastHg18KG,39 unipAliSwissprot,7 unipAliTrembl,7 uniprot,243 uniprot,744 uniprot,925 uniprot,929 uniprot,1005 uniprot,1188 uniprot,1364 uniprot,1385 uniprot,1404 uniprot,1470 xenoRefGene,381 provide uniprot,1860 provided quality,90 uniprot,817 provides uniprot,489 providing nestedRepeats,312 rmsk,335 provisional xenoRefGene,72 pruitt xenoRefGene,320 xenoRefGene,362 pseudogenes uniprot,1184 psl est,57 intronEst,141 mrna,38 uniprot,1479 pslmap uniprot,889 uniprot,1497 uniprot,1528 uniprot,1880 uniprot,1900 pslreps uniprot,1482 uniprot,1502 public cpgIslandExt,537 cpgIslandExtUnmasked,540 cpgIslandSuper,537 est,740 intronEst,824 mrna,457 uniprot,709 publications uniprot,38 publicly nestedRepeats,275 pull-down xenoRefGene,173 purpose simpleRepeat,32 putative blastHg18KG,83 q uniprot,1904 uniprot,1914 q99697 uniprot,1926 quality est,75 mrna,56 quality,1 quality,6 quality,13 quality,19 quality,37 quality,87 queried cpgIslandExt,533 cpgIslandExtUnmasked,536 cpgIslandSuper,533 query blastHg18KG,112 blastHg18KG,124 rmsk,47 rmsk,61 uniprot,1484 questions uniprot,1834 quickly mrna,341 xenoRefGene,152 quite simpleRepeat,45 quot est,241 est,243 est,292 est,294 est,308 est,310 est,344 est,346 est,361 est,363 gc5Base,58 gc5Base,62 gold,37 gold,39 gold,135 gold,137 intronEst,322 intronEst,324 intronEst,373 intronEst,375 intronEst,389 intronEst,391 intronEst,425 intronEst,427 intronEst,442 intronEst,444 mrna,187 mrna,189 mrna,238 mrna,240 mrna,254 mrna,256 mrna,290 mrna,292 mrna,307 mrna,309 rmsk,130 rmsk,133 rmsk,241 rmsk,242 rmsk,248 rmsk,250 rmsk,252 rmsk,254 rmsk,275 rmsk,276 uniprot,63 uniprot,66 uniprot,261 uniprot,263 uniprot,272 uniprot,274 uniprot,283 uniprot,285 uniprot,412 uniprot,416 uniprot,423 uniprot,426 uniprot,431 uniprot,435 uniprot,437 uniprot,441 uniprot,468 uniprot,470 uniprot,471 uniprot,474 uniprot,475 uniprot,478 uniprot,572 uniprot,575 r nestedRepeats,327 rmsk,350 random est,574 intronEst,655 random-primed est,620 intronEst,701 raney blastHg18KG,200 uniprot,1960 range nestedRepeats,227 nestedRepeats,236 quality,47 uniprot,1809 rare cpgIslandExt,57 cpgIslandExt,118 cpgIslandExtUnmasked,60 cpgIslandExtUnmasked,121 cpgIslandSuper,57 cpgIslandSuper,118 rather est,575 intronEst,656 ratio cpgIslandExt,273 cpgIslandExt,349 cpgIslandExt,362 cpgIslandExtUnmasked,276 cpgIslandExtUnmasked,352 cpgIslandExtUnmasked,365 cpgIslandSuper,273 cpgIslandSuper,349 cpgIslandSuper,362 raw uniprot,1708 rc rmsk,200 read est,473 gap,62 gap,153 gold,55 intronEst,554 reads gap,125 gap,145 gold,22 rearrangements nestedRepeats,99 reason cpgIslandExt,136 cpgIslandExtUnmasked,139 cpgIslandSuper,136 reasonably est,541 est,564 intronEst,622 intronEst,645 recently uniprot,1186 record uniprot,496 xenoRefGene,67 reduced intronEst,106 refer uniprot,1827 reference uniprot,1378 uniprot,1422 xenoRefGene,31 xenoRefGene,347 xenoRefGene,369 references cpgIslandExt,603 cpgIslandExtUnmasked,606 cpgIslandSuper,603 est,746 intronEst,830 microsat,113 mrna,463 nestedRepeats,66 nestedRepeats,323 rmsk,102 rmsk,346 simpleRepeat,73 uniprot,1984 xenoRefGene,302 reflect quality,50 reflects rmsk,213 refseq uniprot,823 uniprot,828 uniprot,841 uniprot,845 uniprot,857 uniprot,864 uniprot,1002 uniprot,1010 uniprot,1055 uniprot,1207 uniprot,1236 uniprot,1276 uniprot,1290 xenoRefGene,2 xenoRefGene,5 xenoRefGene,34 xenoRefGene,66 xenoRefGene,300 xenoRefGene,342 xenoRefGene,371 regeneron uniprot,1968 region cpgIslandExt,129 cpgIslandExtUnmasked,132 cpgIslandSuper,129 uniprot,312 regions cpgIslandExt,41 cpgIslandExt,150 cpgIslandExt,182 cpgIslandExtUnmasked,44 cpgIslandExtUnmasked,153 cpgIslandExtUnmasked,185 cpgIslandSuper,41 cpgIslandSuper,150 cpgIslandSuper,182 microsat,14 simpleRepeat,39 unipInterest,3 uniprot,240 uniprot,297 uniprot,300 uniprot,328 uniprot,348 uniprot,368 uniprot,384 regulation cpgIslandExt,13 cpgIslandExt,143 cpgIslandExtUnmasked,16 cpgIslandExtUnmasked,146 cpgIslandSuper,13 cpgIslandSuper,143 related uniprot,551 relationship est,96 intronEst,177 relative gap,46 gold,100 relatively cpgIslandExt,117 cpgIslandExtUnmasked,120 cpgIslandSuper,117 release uniprot,1589 releases uniprot,1561 uniprot,1686 relevant est,160 intronEst,241 mrna,106 uniprot,681 remain uniprot,1189 remaining blastHg18KG,186 removed cpgIslandExt,331 cpgIslandExtUnmasked,334 cpgIslandSuper,331 rmsk,279 uniprot,597 uniprot,1150 reorganizing uniprot,1987 repbase nestedRepeats,45 nestedRepeats,57 nestedRepeats,335 nestedRepeats,342 rmsk,81 rmsk,93 rmsk,114 rmsk,358 rmsk,365 repeat cpgIslandExt,181 cpgIslandExt,191 cpgIslandExtUnmasked,184 cpgIslandExtUnmasked,194 cpgIslandSuper,181 cpgIslandSuper,191 microsat,83 nestedRepeats,85 nestedRepeats,122 nestedRepeats,135 nestedRepeats,257 nestedRepeats,316 rmsk,168 rmsk,175 rmsk,227 rmsk,339 simpleRepeat,47 repeated uniprot,386 uniprot,390 repeating rmsk,2 repeatmasker nestedRepeats,9 nestedRepeats,29 nestedRepeats,73 nestedRepeats,77 nestedRepeats,109 nestedRepeats,254 nestedRepeats,285 nestedRepeats,330 rmsk,1 rmsk,5 rmsk,19 rmsk,78 rmsk,292 rmsk,353 repeats microsat,6 microsat,9 microsat,35 microsat,58 microsat,63 microsat,86 microsat,93 microsat,106 microsat,117 nestedRepeats,6 nestedRepeats,13 nestedRepeats,22 nestedRepeats,37 nestedRepeats,49 nestedRepeats,95 nestedRepeats,366 nestedRepeats,374 nestedRepeats,401 rmsk,8 rmsk,27 rmsk,41 rmsk,68 rmsk,85 rmsk,152 rmsk,179 rmsk,183 rmsk,185 rmsk,187 rmsk,196 rmsk,303 rmsk,310 rmsk,389 rmsk,397 rmsk,424 simpleRepeat,2 simpleRepeat,5 simpleRepeat,10 simpleRepeat,17 simpleRepeat,20 simpleRepeat,24 simpleRepeat,34 simpleRepeat,77 unipRepeat,1 unipRepeat,3 uniprot,383 uniprot,440 repetitive nestedRepeats,351 rmsk,374 uniprot,1400 represent est,41 intronEst,52 representation quality,100 represented gap,37 gap,105 rmsk,49 representing gap,80 reproducibility uniprot,1645 requiring intronEst,94 res est,764 est,789 est,809 intronEst,848 intronEst,873 intronEst,893 microsat,127 mrna,481 mrna,506 mrna,526 simpleRepeat,87 uniprot,1999 xenoRefGene,310 xenoRefGene,351 xenoRefGene,384 research nestedRepeats,54 rmsk,90 residues uniprot,344 resolve uniprot,1357 resolved uniprot,1284 resource uniprot,1995 uniprot,2033 rest cpgIslandExt,518 cpgIslandExtUnmasked,521 cpgIslandSuper,518 result cpgIslandExt,112 cpgIslandExtUnmasked,115 cpgIslandSuper,112 uniprot,798 uniprot,1065 uniprot,1170 resulting uniprot,874 uniprot,1137 uniprot,1308 results uniprot,1463 uniprot,1649 retained uniprot,795 retrieve est,583 intronEst,664 retroposons rmsk,173 reverse est,458 est,492 est,509 intronEst,539 intronEst,573 intronEst,590 review xenoRefGene,64 reviewed xenoRefGene,74 riestra uniprot,1972 rna est,104 est,452 intronEst,185 intronEst,533 rmsk,186 rmsk,189 xenoRefGene,30 xenoRefGene,242 xenoRefGene,288 rnas xenoRefGene,219 robert nestedRepeats,307 rmsk,330 role uniprot,309 rolling rmsk,201 row nestedRepeats,179 rpts nestedRepeats,2 rrna rmsk,191 s blastHg18KG,133 cpgIslandExt,436 cpgIslandExt,440 cpgIslandExt,442 cpgIslandExt,443 cpgIslandExt,445 cpgIslandExt,447 cpgIslandExt,453 cpgIslandExt,455 cpgIslandExtUnmasked,439 cpgIslandExtUnmasked,443 cpgIslandExtUnmasked,445 cpgIslandExtUnmasked,446 cpgIslandExtUnmasked,448 cpgIslandExtUnmasked,450 cpgIslandExtUnmasked,456 cpgIslandExtUnmasked,458 cpgIslandSuper,436 cpgIslandSuper,440 cpgIslandSuper,442 cpgIslandSuper,443 cpgIslandSuper,445 cpgIslandSuper,447 cpgIslandSuper,453 cpgIslandSuper,455 nestedRepeats,286 rmsk,18 rmsk,293 uniprot,751 uniprot,774 same nestedRepeats,143 uniprot,608 uniprot,612 uniprot,641 uniprot,1173 satellite rmsk,184 save cpgIslandExt,582 cpgIslandExtUnmasked,585 cpgIslandSuper,582 sayers est,759 intronEst,843 mrna,476 scaffold gold,50 gold,71 gold,109 scaffolds gold,33 scheib uniprot,2012 scientific uniprot,37 scientists est,744 intronEst,828 mrna,461 xenoRefGene,293 score nestedRepeats,188 nestedRepeats,216 nestedRepeats,223 quality,20 uniprot,950 uniprot,1116 uniprot,1317 uniprot,1349 uniprot,1491 scores quality,2 quality,7 quality,14 quality,53 quality,88 uniprot,1085 scoring cpgIslandExt,238 cpgIslandExt,251 cpgIslandExtUnmasked,241 cpgIslandExtUnmasked,254 cpgIslandSuper,238 cpgIslandSuper,251 screens nestedRepeats,32 rmsk,22 script uniprot,1549 scrna rmsk,193 sea blastHg18KG,74 blastHg18KG,84 est,1 est,4 est,18 est,646 gold,17 intronEst,3 intronEst,19 intronEst,126 intronEst,727 mrna,1 mrna,4 mrna,19 mrna,388 quality,3 quality,95 xenoRefGene,24 xenoRefGene,224 search blastHg18KG,168 searching cpgIslandExt,230 cpgIslandExtUnmasked,233 cpgIslandSuper,230 secondary unipStruct,5 uniprot,361 secreted uniprot,247 section nestedRepeats,67 rmsk,103 uniprot,897 see blastHg18KG,154 intronEst,124 microsat,101 nestedRepeats,296 nestedRepeats,370 rmsk,319 rmsk,393 simpleRepeat,63 uniprot,188 uniprot,526 uniprot,768 uniprot,894 xenoRefGene,209 segment cpgIslandExt,254 cpgIslandExt,299 cpgIslandExtUnmasked,257 cpgIslandExtUnmasked,302 cpgIslandSuper,254 cpgIslandSuper,299 segments cpgIslandExt,252 cpgIslandExtUnmasked,255 cpgIslandSuper,252 select xenoRefGene,162 selected est,296 est,312 est,365 intronEst,377 intronEst,393 intronEst,446 mrna,242 mrna,258 mrna,311 uniprot,986 selecting microsat,60 selective cpgIslandExt,122 cpgIslandExtUnmasked,125 cpgIslandSuper,122 sep nestedRepeats,356 rmsk,379 separated est,267 intronEst,348 mrna,213 seq unipConflict,1 sequence blastHg18KG,76 cpgIslandExt,232 cpgIslandExt,303 cpgIslandExt,325 cpgIslandExt,329 cpgIslandExt,397 cpgIslandExt,410 cpgIslandExtUnmasked,7 cpgIslandExtUnmasked,235 cpgIslandExtUnmasked,306 cpgIslandExtUnmasked,328 cpgIslandExtUnmasked,332 cpgIslandExtUnmasked,400 cpgIslandExtUnmasked,413 cpgIslandSuper,232 cpgIslandSuper,303 cpgIslandSuper,325 cpgIslandSuper,329 cpgIslandSuper,397 cpgIslandSuper,410 est,21 est,92 est,401 est,410 est,584 est,722 est,734 est,741 gap,124 intronEst,22 intronEst,75 intronEst,173 intronEst,482 intronEst,491 intronEst,665 intronEst,803 intronEst,818 intronEst,825 mrna,347 mrna,438 mrna,451 mrna,458 rmsk,48 rmsk,62 unipConflict,4 uniprot,356 uniprot,372 uniprot,381 uniprot,387 uniprot,636 uniprot,967 uniprot,971 uniprot,1134 uniprot,1219 uniprot,1242 uniprot,1379 uniprot,2035 xenoRefGene,277 xenoRefGene,289 xenoRefGene,370 xenoRefGene,375 sequences blastHg18KG,64 est,32 est,603 est,611 intronEst,43 intronEst,684 intronEst,692 microsat,26 microsat,124 nestedRepeats,34 nestedRepeats,42 rmsk,24 rmsk,32 simpleRepeat,84 uniprot,16 uniprot,85 uniprot,112 uniprot,114 uniprot,131 uniprot,138 uniprot,166 uniprot,195 uniprot,197 uniprot,377 uniprot,673 uniprot,781 uniprot,1103 uniprot,1374 uniprot,1424 uniprot,1608 uniprot,1611 uniprot,1889 xenoRefGene,32 xenoRefGene,348 sequencing gap,6 gc5Base,10 gold,7 quality,5 quality,10 quality,18 server uniprot,1699 uniprot,1745 servers cpgIslandExt,539 cpgIslandExtUnmasked,542 cpgIslandSuper,539 set blastHg18KG,148 gap,121 gap,131 uniprot,838 uniprot,858 uniprot,1287 uniprot,1597 settings cpgIslandExt,213 cpgIslandExtUnmasked,216 cpgIslandSuper,213 several est,426 intronEst,507 mrna,365 sf blastHg18KG,156 shade nestedRepeats,194 shaded est,70 mrna,51 nestedRepeats,182 shades nestedRepeats,202 shading intronEst,149 nestedRepeats,240 rmsk,208 rmsk,239 xenoRefGene,59 short rmsk,153 uniprot,460 uniprot,978 shotgun gap,98 gap,141 gold,21 gold,140 should est,332 est,636 intronEst,413 intronEst,717 mrna,278 show intronEst,31 intronEst,64 uniprot,80 uniprot,227 uniprot,538 xenoRefGene,125 shown est,150 gold,92 intronEst,231 microsat,48 mrna,96 uniprot,504 uniprot,628 uniprot,646 uniprot,1580 uniprot,1631 shows est,15 gc5Base,16 gold,11 intronEst,16 mrna,16 nestedRepeats,17 nestedRepeats,81 quality,16 uniprot,14 uniprot,484 xenoRefGene,14 side est,599 gap,55 intronEst,680 signal unipLocSignal,1 unipLocSignal,4 uniprot,238 uniprot,476 uniprot,511 uniprot,564 significantly cpgIslandExt,156 cpgIslandExtUnmasked,159 cpgIslandSuper,156 signifies rmsk,258 signs intronEst,32 similar nestedRepeats,199 uniprot,1403 simple microsat,57 microsat,85 rmsk,178 simpleRepeat,1 simpleRepeat,3 simpleRepeat,15 since uniprot,1383 sine rmsk,157 single blastHg18KG,101 est,633 est,686 intronEst,714 intronEst,767 mrna,402 nestedRepeats,178 uniprot,141 xenoRefGene,241 single-read est,31 intronEst,42 sites cpgIslandExt,34 cpgIslandExtUnmasked,37 cpgIslandSuper,34 uniprot,342 uniprot,354 uniprot,578 uniprot,585 size blastHg18KG,95 sizes gap,148 gold,45 skepticism est,641 intronEst,722 sm xenoRefGene,325 smit nestedRepeats,306 nestedRepeats,324 nestedRepeats,371 nestedRepeats,395 rmsk,17 rmsk,329 rmsk,347 rmsk,394 rmsk,418 snrna rmsk,192 so uniprot,1135 uniprot,1430 soft-masked rmsk,305 software nestedRepeats,255 some cpgIslandExt,134 cpgIslandExtUnmasked,137 cpgIslandSuper,134 est,158 est,555 est,571 est,674 intronEst,239 intronEst,636 intronEst,652 intronEst,755 mrna,104 nestedRepeats,207 rmsk,105 rmsk,268 uniprot,318 sometimes simpleRepeat,50 uniprot,983 sort cpgIslandExt,483 cpgIslandExtUnmasked,486 cpgIslandSuper,483 sorted uniprot,556 source cpgIslandExt,555 cpgIslandExtUnmasked,558 cpgIslandSuper,555 uniprot,820 uniprot,1545 uniprot,1774 uniprot,1788 space est,270 intronEst,351 mrna,216 uniprot,1990 spaces gold,90 specialized simpleRepeat,29 specific est,197 intronEst,278 mrna,143 simpleRepeat,53 splice uniprot,144 spliced intronEst,1 intronEst,9 intronEst,60 splicing intronEst,34 intronEst,95 spontaneous cpgIslandExt,109 cpgIslandExtUnmasked,112 cpgIslandSuper,109 squish nestedRepeats,159 src cpgIslandExt,564 cpgIslandExtUnmasked,567 cpgIslandSuper,564 srprna rmsk,194 staff uniprot,42 uniprot,1965 stage uniprot,1228 stages cpgIslandExt,90 cpgIslandExtUnmasked,93 cpgIslandSuper,90 start cpgIslandExt,33 cpgIslandExtUnmasked,36 cpgIslandSuper,33 est,563 intronEst,644 uniprot,125 uniprot,209 uniprot,1821 stdin cpgIslandExt,415 cpgIslandExt,420 cpgIslandExtUnmasked,418 cpgIslandExtUnmasked,423 cpgIslandSuper,415 cpgIslandSuper,420 stdout cpgIslandExt,413 cpgIslandExt,417 cpgIslandExtUnmasked,416 cpgIslandExtUnmasked,420 cpgIslandSuper,413 cpgIslandSuper,417 uniprot,1825 step uniprot,901 uniprot,1155 uniprot,1330 stored uniprot,1733 strand cpgIslandExt,80 cpgIslandExt,84 cpgIslandExtUnmasked,83 cpgIslandExtUnmasked,87 cpgIslandSuper,80 cpgIslandSuper,84 est,77 intronEst,158 nestedRepeats,144 nestedRepeats,155 strands uniprot,365 strategy uniprot,1120 uniprot,1193 structure unipStruct,1 unipStruct,6 uniprot,362 uniprot,2037 subcellular uniprot,553 submitted est,736 intronEst,820 mrna,453 subset est,136 intronEst,217 microsat,54 mrna,82 subtrack uniprot,411 subtracks uniprot,59 uniprot,72 uniprot,520 uniprot,548 successful est,593 intronEst,674 such cpgIslandExt,65 cpgIslandExtUnmasked,68 cpgIslandSuper,65 uniprot,306 suffix uniprot,1255 suitable uniprot,1868 supercontig gap,102 gap,128 supercontigs gold,38 supported gap,60 sure uniprot,1407 swiss-prot uniprot,2025 swissprot unipAliSwissprot,1 unipAliSwissprot,6 uniprot,3 uniprot,24 uniprot,31 uniprot,76 uniprot,109 uniprot,116 uniprot,127 uniprot,414 uniprot,454 uniprot,495 uniprot,623 uniprot,703 uniprot,1373 synthesized cpgIslandExt,78 cpgIslandExtUnmasked,81 cpgIslandSuper,78 system uniprot,1353 uniprot,1784 t cpgIslandExt,437 cpgIslandExt,439 cpgIslandExt,441 cpgIslandExt,444 cpgIslandExt,446 cpgIslandExt,448 cpgIslandExt,450 cpgIslandExt,452 cpgIslandExt,454 cpgIslandExtUnmasked,440 cpgIslandExtUnmasked,442 cpgIslandExtUnmasked,444 cpgIslandExtUnmasked,447 cpgIslandExtUnmasked,449 cpgIslandExtUnmasked,451 cpgIslandExtUnmasked,453 cpgIslandExtUnmasked,455 cpgIslandExtUnmasked,457 cpgIslandSuper,437 cpgIslandSuper,439 cpgIslandSuper,441 cpgIslandSuper,444 cpgIslandSuper,446 cpgIslandSuper,448 cpgIslandSuper,450 cpgIslandSuper,452 cpgIslandSuper,454 xenoRefGene,365 table cpgIslandExt,521 cpgIslandExtUnmasked,524 cpgIslandSuper,521 est,222 est,225 est,244 intronEst,303 intronEst,306 intronEst,325 mrna,168 mrna,171 mrna,190 uniprot,1720 tables cpgIslandExt,511 cpgIslandExt,529 cpgIslandExtUnmasked,514 cpgIslandExtUnmasked,532 cpgIslandSuper,511 cpgIslandSuper,529 uniprot,1301 tags est,22 intronEst,23 tail est,504 intronEst,585 taken est,475 gap,151 intronEst,556 xenoRefGene,26 tandem microsat,92 microsat,105 microsat,116 simpleRepeat,4 simpleRepeat,16 simpleRepeat,23 simpleRepeat,76 task est,164 intronEst,245 mrna,110 tatusova xenoRefGene,364 tblastn blastHg18KG,8 blastHg18KG,17 blastHg18KG,79 blastHg18KG,140 uniprot,1476 techniques est,569 intronEst,650 ten rmsk,148 tend cpgIslandExt,68 cpgIslandExt,102 cpgIslandExtUnmasked,71 cpgIslandExtUnmasked,105 cpgIslandSuper,68 cpgIslandSuper,102 microsat,37 term est,171 intronEst,252 mrna,117 terminal rmsk,167 terms est,215 est,261 intronEst,296 intronEst,342 mrna,161 mrna,207 text est,178 est,218 est,258 intronEst,259 intronEst,299 intronEst,339 mrna,124 mrna,164 mrna,204 uniprot,1763 than blastHg18KG,108 cpgIslandExt,159 cpgIslandExt,270 cpgIslandExt,275 cpgIslandExtUnmasked,162 cpgIslandExtUnmasked,273 cpgIslandExtUnmasked,278 cpgIslandSuper,159 cpgIslandSuper,270 cpgIslandSuper,275 est,283 est,576 intronEst,364 intronEst,657 mrna,229 nestedRepeats,213 nestedRepeats,271 xenoRefGene,23 xenoRefGene,235 thanks nestedRepeats,303 rmsk,326 uniprot,1974 that blastHg18KG,65 blastHg18KG,118 cpgIslandExt,114 cpgIslandExt,178 cpgIslandExtUnmasked,117 cpgIslandExtUnmasked,181 cpgIslandSuper,114 cpgIslandSuper,178 est,39 est,66 est,120 est,227 est,251 est,299 est,314 est,331 est,355 est,373 est,390 est,405 est,659 est,680 gold,65 intronEst,6 intronEst,30 intronEst,50 intronEst,201 intronEst,308 intronEst,332 intronEst,380 intronEst,395 intronEst,412 intronEst,436 intronEst,454 intronEst,471 intronEst,486 intronEst,740 intronEst,761 microsat,15 mrna,47 mrna,66 mrna,173 mrna,197 mrna,245 mrna,260 mrna,277 mrna,301 mrna,319 mrna,336 nestedRepeats,265 nestedRepeats,273 rmsk,42 rmsk,259 uniprot,167 uniprot,301 uniprot,696 uniprot,734 uniprot,745 uniprot,999 uniprot,1012 uniprot,1169 uniprot,1408 uniprot,1602 uniprot,1624 uniprot,1738 uniprot,1866 xenoRefGene,148 the blastHg18KG,20 blastHg18KG,23 blastHg18KG,30 blastHg18KG,37 blastHg18KG,41 blastHg18KG,49 blastHg18KG,53 blastHg18KG,61 blastHg18KG,73 blastHg18KG,78 blastHg18KG,82 blastHg18KG,100 blastHg18KG,111 blastHg18KG,123 blastHg18KG,131 blastHg18KG,144 blastHg18KG,185 cpgIslandExt,62 cpgIslandExt,76 cpgIslandExt,82 cpgIslandExt,88 cpgIslandExt,111 cpgIslandExt,142 cpgIslandExt,163 cpgIslandExt,168 cpgIslandExt,172 cpgIslandExt,190 cpgIslandExt,197 cpgIslandExt,201 cpgIslandExt,207 cpgIslandExt,211 cpgIslandExt,215 cpgIslandExt,219 cpgIslandExt,231 cpgIslandExt,259 cpgIslandExt,284 cpgIslandExt,288 cpgIslandExt,291 cpgIslandExt,298 cpgIslandExt,300 cpgIslandExt,310 cpgIslandExt,313 cpgIslandExt,317 cpgIslandExt,324 cpgIslandExt,332 cpgIslandExt,336 cpgIslandExt,342 cpgIslandExt,344 cpgIslandExt,348 cpgIslandExt,355 cpgIslandExt,359 cpgIslandExt,361 cpgIslandExt,372 cpgIslandExt,398 cpgIslandExt,401 cpgIslandExt,407 cpgIslandExt,490 cpgIslandExt,501 cpgIslandExt,517 cpgIslandExt,520 cpgIslandExt,524 cpgIslandExt,528 cpgIslandExt,554 cpgIslandExt,557 cpgIslandExt,567 cpgIslandExtUnmasked,65 cpgIslandExtUnmasked,79 cpgIslandExtUnmasked,85 cpgIslandExtUnmasked,91 cpgIslandExtUnmasked,114 cpgIslandExtUnmasked,145 cpgIslandExtUnmasked,166 cpgIslandExtUnmasked,171 cpgIslandExtUnmasked,175 cpgIslandExtUnmasked,193 cpgIslandExtUnmasked,200 cpgIslandExtUnmasked,204 cpgIslandExtUnmasked,210 cpgIslandExtUnmasked,214 cpgIslandExtUnmasked,218 cpgIslandExtUnmasked,222 cpgIslandExtUnmasked,234 cpgIslandExtUnmasked,262 cpgIslandExtUnmasked,287 cpgIslandExtUnmasked,291 cpgIslandExtUnmasked,294 cpgIslandExtUnmasked,301 cpgIslandExtUnmasked,303 cpgIslandExtUnmasked,313 cpgIslandExtUnmasked,316 cpgIslandExtUnmasked,320 cpgIslandExtUnmasked,327 cpgIslandExtUnmasked,335 cpgIslandExtUnmasked,339 cpgIslandExtUnmasked,345 cpgIslandExtUnmasked,347 cpgIslandExtUnmasked,351 cpgIslandExtUnmasked,358 cpgIslandExtUnmasked,362 cpgIslandExtUnmasked,364 cpgIslandExtUnmasked,375 cpgIslandExtUnmasked,401 cpgIslandExtUnmasked,404 cpgIslandExtUnmasked,410 cpgIslandExtUnmasked,493 cpgIslandExtUnmasked,504 cpgIslandExtUnmasked,520 cpgIslandExtUnmasked,523 cpgIslandExtUnmasked,527 cpgIslandExtUnmasked,531 cpgIslandExtUnmasked,557 cpgIslandExtUnmasked,560 cpgIslandExtUnmasked,570 cpgIslandSuper,62 cpgIslandSuper,76 cpgIslandSuper,82 cpgIslandSuper,88 cpgIslandSuper,111 cpgIslandSuper,142 cpgIslandSuper,163 cpgIslandSuper,168 cpgIslandSuper,172 cpgIslandSuper,190 cpgIslandSuper,197 cpgIslandSuper,201 cpgIslandSuper,207 cpgIslandSuper,211 cpgIslandSuper,215 cpgIslandSuper,219 cpgIslandSuper,231 cpgIslandSuper,259 cpgIslandSuper,284 cpgIslandSuper,288 cpgIslandSuper,291 cpgIslandSuper,298 cpgIslandSuper,300 cpgIslandSuper,310 cpgIslandSuper,313 cpgIslandSuper,317 cpgIslandSuper,324 cpgIslandSuper,332 cpgIslandSuper,336 cpgIslandSuper,342 cpgIslandSuper,344 cpgIslandSuper,348 cpgIslandSuper,355 cpgIslandSuper,359 cpgIslandSuper,361 cpgIslandSuper,372 cpgIslandSuper,398 cpgIslandSuper,401 cpgIslandSuper,407 cpgIslandSuper,490 cpgIslandSuper,501 cpgIslandSuper,517 cpgIslandSuper,520 cpgIslandSuper,524 cpgIslandSuper,528 cpgIslandSuper,554 cpgIslandSuper,557 cpgIslandSuper,567 est,27 est,53 est,64 est,76 est,80 est,83 est,86 est,89 est,98 est,103 est,111 est,126 est,130 est,140 est,152 est,162 est,167 est,177 est,182 est,189 est,200 est,203 est,206 est,211 est,221 est,224 est,230 est,240 est,247 est,256 est,277 est,287 est,319 est,326 est,340 est,349 est,357 est,366 est,375 est,392 est,399 est,408 est,419 est,440 est,463 est,477 est,491 est,502 est,508 est,518 est,522 est,533 est,537 est,544 est,553 est,557 est,567 est,587 est,613 est,619 est,654 est,660 est,692 est,695 est,711 est,720 est,738 est,804 gap,13 gap,21 gap,32 gap,45 gap,51 gap,57 gap,77 gap,81 gap,86 gap,95 gap,112 gap,138 gc5Base,12 gc5Base,17 gc5Base,53 gc5Base,57 gc5Base,68 gc5Base,72 gold,12 gold,16 gold,40 gold,63 gold,68 gold,77 gold,94 gold,99 gold,105 gold,119 gold,124 intronEst,28 intronEst,38 intronEst,73 intronEst,96 intronEst,101 intronEst,108 intronEst,125 intronEst,137 intronEst,157 intronEst,161 intronEst,164 intronEst,167 intronEst,170 intronEst,179 intronEst,184 intronEst,192 intronEst,207 intronEst,211 intronEst,221 intronEst,233 intronEst,243 intronEst,248 intronEst,258 intronEst,263 intronEst,270 intronEst,281 intronEst,284 intronEst,287 intronEst,292 intronEst,302 intronEst,305 intronEst,311 intronEst,321 intronEst,328 intronEst,337 intronEst,358 intronEst,368 intronEst,400 intronEst,407 intronEst,421 intronEst,430 intronEst,438 intronEst,447 intronEst,456 intronEst,473 intronEst,480 intronEst,489 intronEst,500 intronEst,521 intronEst,544 intronEst,558 intronEst,572 intronEst,583 intronEst,589 intronEst,599 intronEst,603 intronEst,614 intronEst,618 intronEst,625 intronEst,634 intronEst,638 intronEst,648 intronEst,668 intronEst,694 intronEst,700 intronEst,735 intronEst,741 intronEst,773 intronEst,776 intronEst,792 intronEst,801 intronEst,822 intronEst,888 microsat,43 microsat,46 microsat,56 microsat,82 microsat,84 microsat,91 mrna,13 mrna,25 mrna,34 mrna,45 mrna,57 mrna,72 mrna,76 mrna,86 mrna,98 mrna,108 mrna,113 mrna,123 mrna,128 mrna,135 mrna,146 mrna,149 mrna,152 mrna,157 mrna,167 mrna,170 mrna,176 mrna,186 mrna,193 mrna,202 mrna,223 mrna,233 mrna,265 mrna,272 mrna,286 mrna,295 mrna,303 mrna,312 mrna,321 mrna,338 mrna,345 mrna,356 mrna,379 mrna,394 mrna,397 mrna,408 mrna,411 mrna,427 mrna,436 mrna,442 mrna,455 mrna,521 nestedRepeats,25 nestedRepeats,28 nestedRepeats,44 nestedRepeats,51 nestedRepeats,65 nestedRepeats,69 nestedRepeats,76 nestedRepeats,100 nestedRepeats,105 nestedRepeats,134 nestedRepeats,142 nestedRepeats,149 nestedRepeats,154 nestedRepeats,185 nestedRepeats,193 nestedRepeats,201 nestedRepeats,215 nestedRepeats,220 nestedRepeats,235 nestedRepeats,242 nestedRepeats,248 nestedRepeats,253 nestedRepeats,278 nestedRepeats,284 nestedRepeats,297 nestedRepeats,313 nestedRepeats,397 nestedRepeats,403 quality,12 quality,17 quality,25 quality,27 quality,33 quality,36 quality,39 quality,48 quality,51 quality,69 quality,73 quality,82 quality,86 quality,94 quality,98 rmsk,33 rmsk,40 rmsk,46 rmsk,60 rmsk,66 rmsk,75 rmsk,80 rmsk,87 rmsk,101 rmsk,118 rmsk,204 rmsk,210 rmsk,214 rmsk,229 rmsk,231 rmsk,236 rmsk,238 rmsk,244 rmsk,247 rmsk,260 rmsk,265 rmsk,271 rmsk,274 rmsk,281 rmsk,291 rmsk,320 rmsk,336 rmsk,420 rmsk,426 simpleRepeat,60 uniprot,22 uniprot,40 uniprot,53 uniprot,69 uniprot,81 uniprot,87 uniprot,94 uniprot,102 uniprot,119 uniprot,184 uniprot,202 uniprot,215 uniprot,233 uniprot,259 uniprot,270 uniprot,281 uniprot,308 uniprot,379 uniprot,410 uniprot,421 uniprot,428 uniprot,444 uniprot,463 uniprot,485 uniprot,493 uniprot,510 uniprot,527 uniprot,534 uniprot,539 uniprot,543 uniprot,547 uniprot,562 uniprot,571 uniprot,607 uniprot,640 uniprot,649 uniprot,668 uniprot,698 uniprot,748 uniprot,785 uniprot,789 uniprot,791 uniprot,797 uniprot,802 uniprot,810 uniprot,812 uniprot,819 uniprot,832 uniprot,836 uniprot,855 uniprot,873 uniprot,883 uniprot,903 uniprot,913 uniprot,923 uniprot,927 uniprot,935 uniprot,944 uniprot,947 uniprot,953 uniprot,961 uniprot,969 uniprot,1009 uniprot,1036 uniprot,1039 uniprot,1054 uniprot,1090 uniprot,1112 uniprot,1126 uniprot,1136 uniprot,1140 uniprot,1156 uniprot,1172 uniprot,1212 uniprot,1221 uniprot,1243 uniprot,1253 uniprot,1267 uniprot,1273 uniprot,1278 uniprot,1294 uniprot,1303 uniprot,1307 uniprot,1321 uniprot,1332 uniprot,1339 uniprot,1358 uniprot,1372 uniprot,1376 uniprot,1384 uniprot,1388 uniprot,1409 uniprot,1414 uniprot,1428 uniprot,1431 uniprot,1462 uniprot,1508 uniprot,1512 uniprot,1519 uniprot,1522 uniprot,1527 uniprot,1535 uniprot,1547 uniprot,1574 uniprot,1582 uniprot,1588 uniprot,1592 uniprot,1595 uniprot,1606 uniprot,1609 uniprot,1612 uniprot,1618 uniprot,1621 uniprot,1628 uniprot,1640 uniprot,1664 uniprot,1667 uniprot,1678 uniprot,1681 uniprot,1701 uniprot,1707 uniprot,1711 uniprot,1719 uniprot,1723 uniprot,1729 uniprot,1743 uniprot,1746 uniprot,1753 uniprot,1773 uniprot,1796 uniprot,1857 uniprot,1861 uniprot,1893 uniprot,1963 uniprot,1988 uniprot,1992 uniprot,2024 uniprot,2029 xenoRefGene,28 xenoRefGene,35 xenoRefGene,50 xenoRefGene,57 xenoRefGene,61 xenoRefGene,65 xenoRefGene,76 xenoRefGene,91 xenoRefGene,94 xenoRefGene,97 xenoRefGene,111 xenoRefGene,117 xenoRefGene,122 xenoRefGene,127 xenoRefGene,135 xenoRefGene,163 xenoRefGene,168 xenoRefGene,183 xenoRefGene,198 xenoRefGene,211 xenoRefGene,218 xenoRefGene,223 xenoRefGene,247 xenoRefGene,250 xenoRefGene,266 xenoRefGene,275 xenoRefGene,298 their nestedRepeats,190 uniprot,62 uniprot,723 uniprot,1101 them cpgIslandExt,126 cpgIslandExtUnmasked,129 cpgIslandSuper,126 rmsk,318 uniprot,20 uniprot,173 uniprot,483 then cpgIslandExt,256 cpgIslandExtUnmasked,259 cpgIslandSuper,256 nestedRepeats,232 uniprot,1083 uniprot,1516 there cpgIslandExt,120 cpgIslandExtUnmasked,123 cpgIslandSuper,120 est,622 intronEst,703 uniprot,705 uniprot,1092 therefore gold,113 uniprot,968 uniprot,1145 these est,590 gap,17 gap,103 intronEst,671 microsat,24 nestedRepeats,262 nestedRepeats,266 rmsk,235 simpleRepeat,33 uniprot,99 uniprot,130 uniprot,1160 they uniprot,179 thibaud-nissen xenoRefGene,326 this blastHg18KG,14 blastHg18KG,191 cpgIslandExt,72 cpgIslandExt,222 cpgIslandExt,585 cpgIslandExtUnmasked,75 cpgIslandExtUnmasked,225 cpgIslandExtUnmasked,588 cpgIslandSuper,72 cpgIslandSuper,222 cpgIslandSuper,585 est,13 est,50 est,115 est,142 est,378 est,415 est,595 est,631 est,644 est,726 gap,8 gap,42 gap,83 gap,115 gc5Base,38 gc5Base,77 gold,9 gold,60 gold,129 intronEst,14 intronEst,134 intronEst,196 intronEst,223 intronEst,459 intronEst,496 intronEst,676 intronEst,712 intronEst,725 intronEst,807 intronEst,810 microsat,11 microsat,50 microsat,99 mrna,31 mrna,61 mrna,88 mrna,324 mrna,352 nestedRepeats,15 nestedRepeats,79 nestedRepeats,321 quality,54 rmsk,10 rmsk,51 rmsk,143 rmsk,344 simpleRepeat,12 simpleRepeat,31 uniprot,12 uniprot,134 uniprot,149 uniprot,218 uniprot,220 uniprot,653 uniprot,663 uniprot,871 uniprot,878 uniprot,1018 uniprot,1058 uniprot,1063 uniprot,1248 uniprot,1259 uniprot,1352 uniprot,1447 uniprot,1530 uniprot,1553 uniprot,1562 uniprot,1657 uniprot,1674 uniprot,1688 uniprot,1939 xenoRefGene,12 xenoRefGene,38 xenoRefGene,47 xenoRefGene,85 xenoRefGene,140 xenoRefGene,179 xenoRefGene,215 xenoRefGene,281 those est,371 est,404 intronEst,452 intronEst,485 microsat,62 mrna,317 nestedRepeats,272 uniprot,729 xenoRefGene,229 three uniprot,1227 three-step uniprot,989 through gap,76 nestedRepeats,97 rmsk,309 uniprot,98 uniprot,133 uniprot,633 uniprot,804 uniprot,1521 xenoRefGene,90 time cpgIslandExt,99 cpgIslandExt,237 cpgIslandExtUnmasked,102 cpgIslandExtUnmasked,240 cpgIslandSuper,99 cpgIslandSuper,237 tissue est,207 est,242 est,257 intronEst,288 intronEst,323 intronEst,338 mrna,153 mrna,188 mrna,203 tissues est,250 intronEst,331 mrna,196 to blastHg18KG,56 blastHg18KG,189 cpgIslandExt,69 cpgIslandExt,103 cpgIslandExt,124 cpgIslandExt,139 cpgIslandExt,205 cpgIslandExt,283 cpgIslandExt,358 cpgIslandExt,365 cpgIslandExt,371 cpgIslandExtUnmasked,72 cpgIslandExtUnmasked,106 cpgIslandExtUnmasked,127 cpgIslandExtUnmasked,142 cpgIslandExtUnmasked,208 cpgIslandExtUnmasked,286 cpgIslandExtUnmasked,361 cpgIslandExtUnmasked,368 cpgIslandExtUnmasked,374 cpgIslandSuper,69 cpgIslandSuper,103 cpgIslandSuper,124 cpgIslandSuper,139 cpgIslandSuper,205 cpgIslandSuper,283 cpgIslandSuper,358 cpgIslandSuper,365 cpgIslandSuper,371 est,97 est,124 est,161 est,165 est,180 est,187 est,191 est,209 est,229 est,236 est,335 est,384 est,394 est,418 est,439 est,448 est,517 est,582 est,642 est,737 gc5Base,48 gold,122 intronEst,57 intronEst,178 intronEst,205 intronEst,242 intronEst,246 intronEst,261 intronEst,268 intronEst,272 intronEst,290 intronEst,310 intronEst,317 intronEst,416 intronEst,465 intronEst,475 intronEst,499 intronEst,520 intronEst,529 intronEst,598 intronEst,663 intronEst,723 intronEst,821 microsat,18 microsat,38 microsat,121 mrna,70 mrna,107 mrna,111 mrna,126 mrna,133 mrna,137 mrna,155 mrna,175 mrna,182 mrna,281 mrna,330 mrna,340 mrna,355 mrna,378 mrna,454 nestedRepeats,148 nestedRepeats,152 nestedRepeats,174 nestedRepeats,184 nestedRepeats,200 nestedRepeats,225 nestedRepeats,234 nestedRepeats,260 nestedRepeats,304 nestedRepeats,319 quality,44 quality,64 rmsk,147 rmsk,315 rmsk,327 rmsk,342 simpleRepeat,81 unipAliSwissprot,8 unipAliTrembl,8 uniprot,27 uniprot,86 uniprot,101 uniprot,118 uniprot,201 uniprot,214 uniprot,226 uniprot,245 uniprot,492 uniprot,525 uniprot,552 uniprot,559 uniprot,658 uniprot,682 uniprot,764 uniprot,784 uniprot,801 uniprot,849 uniprot,917 uniprot,920 uniprot,955 uniprot,974 uniprot,1008 uniprot,1088 uniprot,1196 uniprot,1215 uniprot,1220 uniprot,1247 uniprot,1285 uniprot,1336 uniprot,1356 uniprot,1369 uniprot,1405 uniprot,1413 uniprot,1460 uniprot,1473 uniprot,1478 uniprot,1493 uniprot,1518 uniprot,1551 uniprot,1676 uniprot,1761 uniprot,1802 uniprot,1828 uniprot,1846 uniprot,1851 uniprot,1856 uniprot,1884 uniprot,1890 uniprot,1975 xenoRefGene,115 xenoRefGene,151 xenoRefGene,158 xenoRefGene,182 xenoRefGene,208 together blastHg18KG,89 tolerated uniprot,1257 tool blastHg18KG,147 blastHg18KG,169 est,807 intronEst,891 mrna,524 uniprot,1766 uniprot,1797 xenoRefGene,308 tools nestedRepeats,314 rmsk,337 uniprot,1873 top cpgIslandExt,220 cpgIslandExtUnmasked,223 cpgIslandSuper,220 uniprot,1304 uniprot,1340 uniprot,1489 xenoRefGene,95 top-scoring uniprot,792 topological uniprot,330 track blastHg18KG,15 blastHg18KG,34 blastHg18KG,45 blastHg18KG,192 cpgIslandExt,173 cpgIslandExt,202 cpgIslandExt,216 cpgIslandExt,314 cpgIslandExt,318 cpgIslandExt,402 cpgIslandExt,492 cpgIslandExt,586 cpgIslandExtUnmasked,176 cpgIslandExtUnmasked,205 cpgIslandExtUnmasked,219 cpgIslandExtUnmasked,317 cpgIslandExtUnmasked,321 cpgIslandExtUnmasked,405 cpgIslandExtUnmasked,495 cpgIslandExtUnmasked,589 cpgIslandSuper,173 cpgIslandSuper,202 cpgIslandSuper,216 cpgIslandSuper,314 cpgIslandSuper,318 cpgIslandSuper,402 cpgIslandSuper,492 cpgIslandSuper,586 est,14 est,51 est,116 est,141 est,153 est,379 est,645 est,727 gap,9 gap,43 gc5Base,15 gc5Base,39 gold,10 gold,61 gold,130 intronEst,15 intronEst,129 intronEst,135 intronEst,197 intronEst,222 intronEst,234 intronEst,460 intronEst,726 intronEst,808 intronEst,811 microsat,12 microsat,51 microsat,59 microsat,87 mrna,15 mrna,32 mrna,62 mrna,87 mrna,99 mrna,325 mrna,444 nestedRepeats,16 nestedRepeats,78 nestedRepeats,80 nestedRepeats,322 quality,15 quality,34 quality,55 rmsk,11 rmsk,52 rmsk,144 rmsk,345 simpleRepeat,13 uniprot,13 uniprot,104 uniprot,150 uniprot,219 uniprot,221 uniprot,234 uniprot,422 uniprot,429 uniprot,576 uniprot,654 uniprot,710 uniprot,1004 uniprot,1208 uniprot,1277 uniprot,1554 uniprot,1563 uniprot,1583 uniprot,1658 uniprot,1671 uniprot,1689 uniprot,1713 uniprot,1754 uniprot,1940 xenoRefGene,13 xenoRefGene,39 xenoRefGene,48 xenoRefGene,86 xenoRefGene,98 xenoRefGene,141 xenoRefGene,170 xenoRefGene,282 tracks est,59 est,424 intronEst,143 intronEst,505 mrna,40 mrna,363 uniprot,91 uniprot,123 uniprot,206 uniprot,409 uniprot,1643 xenoRefGene,56 transcribed est,44 est,459 intronEst,55 intronEst,540 transcript est,554 intronEst,635 uniprot,837 uniprot,908 uniprot,918 uniprot,945 uniprot,963 uniprot,1003 uniprot,1076 uniprot,1223 uniprot,1237 uniprot,1249 uniprot,1263 uniprot,1268 uniprot,1291 uniprot,1325 uniprot,1596 uniprot,1610 uniprot,1623 transcript-genome uniprot,813 uniprot,1619 transcript-to-genome uniprot,806 transcriptase est,510 intronEst,591 transcription cpgIslandExt,32 cpgIslandExtUnmasked,35 cpgIslandSuper,32 est,101 est,493 est,540 est,562 intronEst,182 intronEst,574 intronEst,621 intronEst,643 transcripts uniprot,786 uniprot,833 uniprot,928 uniprot,936 uniprot,957 uniprot,985 uniprot,992 uniprot,1011 uniprot,1022 uniprot,1032 uniprot,1056 uniprot,1069 uniprot,1091 uniprot,1096 uniprot,1108 uniprot,1127 uniprot,1168 uniprot,1338 uniprot,1474 xenoRefGene,379 transmembrane unipLocTransMemb,1 unipLocTransMemb,3 uniprot,265 uniprot,273 uniprot,515 uniprot,567 transposable nestedRepeats,379 rmsk,402 trembl unipAliTrembl,1 unipAliTrembl,6 uniprot,4 uniprot,44 uniprot,79 uniprot,185 uniprot,192 uniprot,199 uniprot,211 uniprot,500 uniprot,604 uniprot,661 trends nestedRepeats,353 rmsk,376 trf simpleRepeat,7 simpleRepeat,26 simpleRepeat,61 simpleRepeat,67 tri-nucleotide microsat,5 microsat,34 tried uniprot,869 trna rmsk,190 ts cpgIslandExt,106 cpgIslandExtUnmasked,109 cpgIslandSuper,106 turn cpgIslandExt,104 cpgIslandExtUnmasked,107 cpgIslandSuper,104 xenoRefGene,133 turns uniprot,370 twice cpgIslandExt,354 cpgIslandExtUnmasked,357 cpgIslandSuper,354 two uniprot,71 uniprot,630 uniprot,1641 twobittofa cpgIslandExt,411 cpgIslandExt,497 cpgIslandExt,502 cpgIslandExtUnmasked,414 cpgIslandExtUnmasked,500 cpgIslandExtUnmasked,505 cpgIslandSuper,411 cpgIslandSuper,497 cpgIslandSuper,502 type est,169 est,199 gold,134 intronEst,250 intronEst,280 mrna,115 mrna,145 uniprot,65 uniprot,271 uniprot,464 uniprot,614 types est,248 est,427 gap,89 intronEst,329 intronEst,508 mrna,194 mrna,366 uniprot,676 typical cpgIslandExt,161 cpgIslandExtUnmasked,164 cpgIslandSuper,161 typically cpgIslandExt,29 cpgIslandExtUnmasked,32 cpgIslandSuper,29 est,33 est,462 gc5Base,33 intronEst,44 intronEst,543 ucsc blastHg18KG,32 blastHg18KG,43 est,731 intronEst,815 mrna,448 nestedRepeats,245 unipAliSwissprot,3 unipAliTrembl,3 uniprot,107 uniprot,190 uniprot,773 uniprot,826 uniprot,827 uniprot,844 uniprot,1206 uniprot,1275 uniprot,1668 uniprot,1947 xenoRefGene,286 undergone xenoRefGene,69 underlying uniprot,1682 xenoRefGene,37 unexpected uniprot,766 uniprot unipChain,2 unipConflict,3 unipDisulfBond,3 unipDomain,2 unipInterest,2 unipLocCytopl,2 unipLocExtra,2 unipLocSignal,3 unipLocTransMemb,2 unipModif,3 unipMut,2 unipOther,3 unipRepeat,2 unipStruct,2 uniprot,1 uniprot,2 uniprot,23 uniprot,30 uniprot,41 uniprot,43 uniprot,68 uniprot,152 uniprot,237 uniprot,253 uniprot,264 uniprot,275 uniprot,286 uniprot,296 uniprot,322 uniprot,332 uniprot,337 uniprot,349 uniprot,358 uniprot,371 uniprot,380 uniprot,382 uniprot,392 uniprot,413 uniprot,424 uniprot,453 uniprot,494 uniprot,529 uniprot,544 uniprot,573 uniprot,669 uniprot,714 uniprot,721 uniprot,738 uniprot,750 uniprot,779 uniprot,924 uniprot,996 uniprot,1016 uniprot,1029 uniprot,1231 uniprot,1437 uniprot,1503 uniprot,1509 uniprot,1513 uniprot,1591 uniprot,1669 uniprot,1702 uniprot,1817 uniprot,1845 uniprot,1910 uniprot,1964 uniprot,1976 uniprot,1985 uniprot,1996 uniprot-annotated uniprot,1279 unipstruct.bb uniprot,1818 uniptogenome.over.chain.gz uniprot,1896 uniprot,1912 uniprot,1934 uniptogenomelift.psl.gz uniprot,1899 unique uniprot,1600 universal uniprot,1993 unknown rmsk,203 unless cpgIslandExt,119 cpgIslandExtUnmasked,122 cpgIslandSuper,119 nestedRepeats,206 unmasked cpgIslandExt,169 cpgIslandExt,208 cpgIslandExt,315 cpgIslandExt,491 cpgIslandExtUnmasked,1 cpgIslandExtUnmasked,172 cpgIslandExtUnmasked,211 cpgIslandExtUnmasked,318 cpgIslandExtUnmasked,494 cpgIslandSuper,169 cpgIslandSuper,208 cpgIslandSuper,315 cpgIslandSuper,491 unprocessed est,605 intronEst,686 unpublished cpgIslandExt,602 cpgIslandExtUnmasked,605 cpgIslandSuper,602 unspliced est,8 est,634 intronEst,123 intronEst,715 unsure rmsk,263 up blastHg18KG,67 gold,67 rmsk,146 update est,786 intronEst,870 mrna,503 nestedRepeats,46 nestedRepeats,58 nestedRepeats,336 nestedRepeats,343 rmsk,82 rmsk,94 rmsk,359 rmsk,366 xenoRefGene,344 updated uniprot,1566 xenoRefGene,41 us uniprot,687 uniprot,1441 use est,166 gold,78 intronEst,247 mrna,112 uniprot,991 uniprot,1021 uniprot,1073 uniprot,1225 used blastHg18KG,188 cpgIslandExt,308 cpgIslandExtUnmasked,311 cpgIslandSuper,308 est,123 est,275 est,334 est,573 intronEst,204 intronEst,356 intronEst,415 intronEst,654 mrna,69 mrna,221 mrna,280 nestedRepeats,247 nestedRepeats,292 nestedRepeats,318 rmsk,299 rmsk,341 uniprot,1062 uniprot,1087 uniprot,1118 uniprot,1198 uniprot,1210 uniprot,1319 uniprot,1351 uniprot,1550 uniprot,1626 uniprot,1801 uniprot,1883 useful microsat,20 user est,393 intronEst,474 mrna,339 users uniprot,406 uniprot,684 xenoRefGene,150 uses rmsk,79 using blastHg18KG,52 blastHg18KG,77 blastHg18KG,90 cpgIslandExt,516 cpgIslandExt,589 cpgIslandExtUnmasked,519 cpgIslandExtUnmasked,592 cpgIslandSuper,516 cpgIslandSuper,589 est,656 gap,143 intronEst,737 microsat,90 mrna,396 nestedRepeats,43 nestedRepeats,104 nestedRepeats,283 rmsk,15 rmsk,290 uniprot,217 uniprot,722 uniprot,1526 xenoRefGene,227 usually est,40 gap,150 intronEst,51 nestedRepeats,192 utilities blastHg18KG,187 utils cpgIslandExt,565 cpgIslandExtUnmasked,568 cpgIslandSuper,565 valid est,214 intronEst,295 mrna,160 validate xenoRefGene,153 value est,285 intronEst,366 mrna,231 variant uniprot,2026 variants uniprot,357 uniprot,415 uniprot,425 uniprot,533 uniprot,943 uniprot,2042 variation microsat,7 nestedRepeats,11 rmsk,6 simpleRepeat,8 uniprot,438 variety gc5Base,45 quality,61 various uniprot,50 varying gap,107 vector est,470 intronEst,551 version cpgIslandExt,170 cpgIslandExt,193 cpgIslandExt,199 cpgIslandExt,209 cpgIslandExtUnmasked,173 cpgIslandExtUnmasked,196 cpgIslandExtUnmasked,202 cpgIslandExtUnmasked,212 cpgIslandSuper,170 cpgIslandSuper,193 cpgIslandSuper,199 cpgIslandSuper,209 rmsk,58 uniprot,1254 uniprot,1297 uniprot,1576 uniprot,1593 versions nestedRepeats,251 nestedRepeats,267 uniprot,1655 vertebrate cpgIslandExt,59 cpgIslandExt,611 cpgIslandExtUnmasked,62 cpgIslandExtUnmasked,614 cpgIslandSuper,59 cpgIslandSuper,611 vertebrates cpgIslandExt,25 cpgIslandExtUnmasked,28 cpgIslandSuper,25 very est,677 intronEst,758 uniprot,977 uniprot,1185 uniprot,1399 uniprot,1402 via uniprot,1293 view cpgIslandExt,206 cpgIslandExtUnmasked,209 cpgIslandSuper,206 est,210 intronEst,291 mrna,156 viewed est,638 gold,70 intronEst,719 visibility cpgIslandExt,212 cpgIslandExtUnmasked,215 cpgIslandSuper,212 visible cpgIslandExt,188 cpgIslandExtUnmasked,191 cpgIslandSuper,188 uniprot,147 w blastHg18KG,158 blastHg18KG,160 gold,136 want uniprot,690 was blastHg18KG,180 cpgIslandExt,255 cpgIslandExt,307 cpgIslandExt,587 cpgIslandExtUnmasked,258 cpgIslandExtUnmasked,310 cpgIslandExtUnmasked,590 cpgIslandSuper,255 cpgIslandSuper,307 cpgIslandSuper,587 est,699 est,728 intronEst,780 intronEst,812 microsat,108 mrna,415 mrna,445 rmsk,12 rmsk,262 simpleRepeat,68 uniprot,799 uniprot,815 uniprot,1354 uniprot,1625 uniprot,1941 xenoRefGene,254 xenoRefGene,283 way uniprot,1459 ways gc5Base,47 quality,63 we rmsk,122 uniprot,1224 uniprot,1453 uniprot,1859 weekly xenoRefGene,42 well cpgIslandExt,549 cpgIslandExtUnmasked,552 cpgIslandSuper,549 est,542 est,565 intronEst,623 intronEst,646 rmsk,54 were blastHg18KG,46 blastHg18KG,70 blastHg18KG,87 blastHg18KG,114 blastHg18KG,136 blastHg18KG,193 cpgIslandExt,227 cpgIslandExtUnmasked,230 cpgIslandSuper,227 est,592 est,651 est,723 gc5Base,79 gold,23 gold,30 intronEst,673 intronEst,732 mrna,391 mrna,439 quality,89 quality,105 uniprot,782 uniprot,794 uniprot,930 uniprot,937 uniprot,1386 uniprot,1471 uniprot,1505 uniprot,1515 xenoRefGene,220 xenoRefGene,237 xenoRefGene,278 wget uniprot,1903 uniprot,1913 wheeler est,783 intronEst,867 mrna,500 when est,146 est,156 est,684 gold,27 intronEst,35 intronEst,227 intronEst,237 intronEst,765 mrna,92 mrna,102 mrna,400 quality,41 uniprot,951 uniprot,1202 uniprot,1632 xenoRefGene,239 where cpgIslandExt,151 cpgIslandExt,393 cpgIslandExtUnmasked,154 cpgIslandExtUnmasked,396 cpgIslandSuper,151 cpgIslandSuper,393 gold,85 uniprot,1192 which cpgIslandExt,85 cpgIslandExtUnmasked,88 cpgIslandSuper,85 est,106 est,233 est,499 est,524 est,671 intronEst,187 intronEst,314 intronEst,580 intronEst,605 intronEst,752 mrna,179 nestedRepeats,31 nestedRepeats,87 rmsk,21 rmsk,64 rmsk,158 rmsk,171 rmsk,197 simpleRepeat,27 uniprot,158 uniprot,1380 uniprot,1768 white gap,72 whole cpgIslandExt,167 cpgIslandExtUnmasked,170 cpgIslandSuper,167 gap,96 gap,139 gold,138 whole-genome gold,20 width cpgIslandExt,430 cpgIslandExt,467 cpgIslandExt,470 cpgIslandExt,478 cpgIslandExtUnmasked,433 cpgIslandExtUnmasked,470 cpgIslandExtUnmasked,473 cpgIslandExtUnmasked,481 cpgIslandSuper,430 cpgIslandSuper,467 cpgIslandSuper,470 cpgIslandSuper,478 wildcards est,271 intronEst,352 mrna,217 will est,304 est,322 est,351 est,368 intronEst,385 intronEst,403 intronEst,432 intronEst,449 mrna,250 mrna,268 mrna,297 mrna,314 rmsk,277 rmsk,283 uniprot,537 uniprot,665 uniprot,754 uniprot,1142 uniprot,1162 windows gc5Base,7 gc5Base,28 wish est,235 intronEst,316 mrna,181 xenoRefGene,207 with blastHg18KG,48 blastHg18KG,72 cpgIslandExt,19 cpgIslandExt,39 cpgIslandExt,141 cpgIslandExt,540 cpgIslandExtUnmasked,22 cpgIslandExtUnmasked,42 cpgIslandExtUnmasked,144 cpgIslandExtUnmasked,543 cpgIslandSuper,19 cpgIslandSuper,39 cpgIslandSuper,141 cpgIslandSuper,540 est,105 est,501 est,639 est,676 est,719 gap,20 gc5Base,35 intronEst,186 intronEst,582 intronEst,720 intronEst,757 intronEst,800 microsat,69 microsat,76 mrna,435 nestedRepeats,133 rmsk,111 rmsk,225 simpleRepeat,52 uniprot,183 uniprot,258 uniprot,280 uniprot,458 uniprot,639 uniprot,716 uniprot,788 uniprot,946 uniprot,1475 uniprot,1481 uniprot,1496 uniprot,1501 uniprot,1718 uniprot,1948 xenoRefGene,230 xenoRefGene,274 within est,139 est,552 est,708 gold,48 gold,107 gold,128 intronEst,220 intronEst,633 intronEst,789 mrna,85 mrna,424 simpleRepeat,37 uniprot,1109 uniprot,1313 uniprot,1345 uniprot,1488 uniprot,1806 xenoRefGene,84 xenoRefGene,263 without uniprot,139 wj est,802 intronEst,886 mrna,519 xenoRefGene,304 words uniprot,1201 worldwide est,745 intronEst,829 mrna,462 xenoRefGene,294 would cpgIslandExt,184 cpgIslandExtUnmasked,187 cpgIslandSuper,184 written blastHg18KG,181 blastHg18KG,194 microsat,109 quality,106 simpleRepeat,69 www.repeatmasker.org nestedRepeats,333 rmsk,356 x uniprot,1923 xml uniprot,1510 years uniprot,933 yip uniprot,2010 yl uniprot,2011 you est,234 intronEst,315 mrna,180 rmsk,115 uniprot,655 uniprot,689 uniprot,1443 xenoRefGene,206 younger nestedRepeats,94 your uniprot,1783 zinc uniprot,326 zoomed quality,42