##maf version=1 scoring=roast.v3.3 a score=77.000000 s galGal6.chrUn_NW_020109879v1 177 3 + 1800 act s picPub1.KL215363 124734 3 - 586038 CCT i picPub1.KL215363 N 0 N 0 a score=152.000000 s galGal6.chrUn_NW_020109879v1 202 6 + 1800 cccaca s tauEry1.JNOY01063823 0 6 - 221 CGCCCA i tauEry1.JNOY01063823 N 0 C 0 a score=-70.000000 s galGal6.chrUn_NW_020109879v1 208 3 + 1800 tgt s cotJap2.chr19 6305660 3 - 8760791 Gat i cotJap2.chr19 N 0 I 30 s tauEry1.JNOY01063823 6 3 - 221 TGC i tauEry1.JNOY01063823 C 0 C 0 a score=400.000000 s galGal6.chrUn_NW_020109879v1 211 4 + 1800 cccc s tauEry1.JNOY01063823 9 4 - 221 CCCC i tauEry1.JNOY01063823 C 0 C 0 e cotJap2.chr19 6305663 30 - 8760791 I a score=-208.000000 s galGal6.chrUn_NW_020109879v1 215 22 + 1800 atatatccccattgtcccccac s tauEry1.JNOY01063823 13 18 - 221 AT----CCCCAGGGTGGCACCT i tauEry1.JNOY01063823 C 0 C 0 s hg38.chr6 30654573 22 + 170805979 ATGTCTTTCTATTTTACCCTAC i hg38.chr6 N 0 C 0 e cotJap2.chr19 6305663 30 - 8760791 I a score=1.000000 s galGal6.chrUn_NW_020109879v1 237 7 + 1800 tgtcccc s cotJap2.chr19 6305693 7 - 8760791 tgagccc i cotJap2.chr19 I 30 C 0 s tauEry1.JNOY01063823 31 3 - 221 ----CCA i tauEry1.JNOY01063823 C 0 C 0 s hg38.chr6 30654595 7 + 170805979 CTTCCTC i hg38.chr6 C 0 C 0 a score=-1066.000000 s galGal6.chrUn_NW_020109879v1 244 3 + 1800 ------cac- s cotJap2.chr19 6305700 3 - 8760791 ------tgc- i cotJap2.chr19 C 0 I 11 s tauEry1.JNOY01063823 34 3 - 221 ------TGC- i tauEry1.JNOY01063823 C 0 I 4 s anoCar2.chr2 192116664 3 + 199619895 ------CAC- i anoCar2.chr2 N 0 I 1 s hg38.chr6 30654602 10 + 170805979 TTTCTGTACC i hg38.chr6 C 0 C 0 a score=-2486.000000 s galGal6.chrUn_NW_020109879v1 247 11 + 1800 tgtccccgctg s tauEry1.JNOY01063823 41 7 - 221 GGCCAC----A i tauEry1.JNOY01063823 I 4 I 1 s anoCar2.chr2 192116668 10 + 199619895 GGTTTCTTTG- i anoCar2.chr2 I 1 I 1 s hg38.chr6 30654612 11 + 170805979 AGTCCCAGCAA i hg38.chr6 C 0 C 0 e cotJap2.chr19 6305703 11 - 8760791 I a score=-5913.000000 s galGal6.chrUn_NW_020109879v1 258 12 + 1800 tcccca---------------------tgtgtc s cotJap2.chr19 6305714 33 - 8760791 caccgagccctgcattgagccctgcactgagcc i cotJap2.chr19 I 11 C 0 s tauEry1.JNOY01063823 49 12 - 221 CCCCGT---------------------GGTGGC i tauEry1.JNOY01063823 I 1 C 0 s anoCar2.chr2 192116679 14 + 199619895 TACCATGC-------------------CGTCTC i anoCar2.chr2 I 1 C 0 s hg38.chr6 30654623 14 + 170805979 -------------CTTGAACC------TGGGTT i hg38.chr6 C 0 C 0 a score=-1059.000000 s galGal6.chrUn_NW_020109879v1 270 2 + 1800 ct s cotJap2.chr19 6305747 2 - 8760791 ct i cotJap2.chr19 C 0 I 5 s tauEry1.JNOY01063823 61 1 - 221 A- i tauEry1.JNOY01063823 C 0 C 0 s gasAcu1.chrUn 27922777 2 + 62550211 CT i gasAcu1.chrUn N 0 C 0 e anoCar2.chr2 192116693 0 + 199619895 C e hg38.chr6 30654637 0 + 170805979 C a score=-2238.000000 s galGal6.chrUn_NW_020109879v1 272 4 + 1800 --cata s tauEry1.JNOY01063823 62 4 - 221 --TCTC i tauEry1.JNOY01063823 C 0 C 0 s anoCar2.chr2 192116693 4 + 199619895 --CAAA i anoCar2.chr2 C 0 I 6 s hg38.chr6 30654637 4 + 170805979 --CTTA i hg38.chr6 C 0 C 0 s gasAcu1.chrUn 27922779 4 + 62550211 AGCA-- i gasAcu1.chrUn C 0 C 0 e cotJap2.chr19 6305749 5 - 8760791 I a score=-577.000000 s galGal6.chrUn_NW_020109879v1 276 1 + 1800 t s cotJap2.chr19 6305754 1 - 8760791 g i cotJap2.chr19 I 5 C 0 s tauEry1.JNOY01063823 66 1 - 221 C i tauEry1.JNOY01063823 C 0 C 0 s hg38.chr6 30654641 1 + 170805979 G i hg38.chr6 C 0 C 0 s gasAcu1.chrUn 27922783 1 + 62550211 T i gasAcu1.chrUn C 0 C 0 e anoCar2.chr2 192116697 6 + 199619895 I a score=-10924.000000 s galGal6.chrUn_NW_020109879v1 277 13 + 1800 ------atcccc--attgtcc s cotJap2.chr19 6305755 15 - 8760791 ------agccctgtattgagc i cotJap2.chr19 C 0 N 0 s tauEry1.JNOY01063823 67 13 - 221 ------ACCCCC--ATGGCCA i tauEry1.JNOY01063823 C 0 C 0 s araMac1.KE080522 3 9 - 2588 ------atcccc--atc---- i araMac1.KE080522 N 0 C 0 s anoCar2.chr2 192116703 8 + 199619895 ------AACTAT--AT----- i anoCar2.chr2 I 6 C 0 s hg38.chr6 30654642 7 + 170805979 --------------CTTGCCA i hg38.chr6 C 0 I 3 s gasAcu1.chrUn 27922784 13 + 62550211 CTCCAAGTCTCT--C------ i gasAcu1.chrUn C 0 C 0 a score=-6065.000000 s galGal6.chrUn_NW_020109879v1 290 5 + 1800 ccca-----c s tauEry1.JNOY01063823 80 1 - 221 C--------- i tauEry1.JNOY01063823 C 0 C 0 s araMac1.KE080522 12 10 - 2588 cccacgGTGC i araMac1.KE080522 C 0 C 0 s anoCar2.chr2 192116711 5 + 199619895 -----CTGAC i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654652 3 + 170805979 -------CAC i hg38.chr6 I 3 C 0 s gasAcu1.chrUn 27922797 5 + 62550211 -----CTCGC i gasAcu1.chrUn C 0 C 0 a score=-18541.000000 s galGal6.chrUn_NW_020109879v1 295 20 + 1800 tgtcccc----------ct-atgtccccgct s tauEry1.JNOY01063823 81 15 - 221 -GTCCCC---------------GTGCCCGTG i tauEry1.JNOY01063823 C 0 C 0 s araMac1.KE080522 22 16 - 2588 TGCCCCT---------------ATGCCCGCG i araMac1.KE080522 C 0 C 0 s anoCar2.chr2 192116716 30 + 199619895 AATCCCTCAGGGTTTGGCT-ATATGGATATG i anoCar2.chr2 C 0 I 6 s hg38.chr6 30654655 2 + 170805979 -----------------------------CA i hg38.chr6 C 0 I 12 s mm10.chr17 59096130 8 - 94987271 -----------------------TGCCAACA i mm10.chr17 N 0 I 10 s gasAcu1.chrUn 27922802 20 + 62550211 ----------CACCCGTCTCATGCACCCCT- i gasAcu1.chrUn C 0 C 0 a score=-7151.000000 s galGal6.chrUn_NW_020109879v1 315 3 + 1800 gt-----c s tauEry1.JNOY01063823 96 8 - 221 GCGGCACC i tauEry1.JNOY01063823 C 0 C 0 s araMac1.KE080522 38 7 - 2588 GT-GCTGC i araMac1.KE080522 C 0 C 0 s cheMyd1.KB566561 240187 3 + 486768 -----GGC i cheMyd1.KB566561 N 0 C 0 s anoCar2.chr2 192116752 3 + 199619895 -----TGC i anoCar2.chr2 I 6 C 0 s hg38.chr6 30654669 3 + 170805979 -----GTC i hg38.chr6 I 12 C 0 s mm10.chr17 59096148 3 - 94987271 -----ATT i mm10.chr17 I 10 C 0 s gasAcu1.chrUn 27922822 3 + 62550211 -----CGC i gasAcu1.chrUn C 0 C 0 a score=-30065.000000 s galGal6.chrUn_NW_020109879v1 318 15 + 1800 -------cccacatgtc----cc----cat s tauEry1.JNOY01063823 104 15 - 221 -------TCCGCGTGCC----CC----CAG i tauEry1.JNOY01063823 C 0 C 0 s araMac1.KE080522 45 8 - 2588 -------CCCACGGT--------------- i araMac1.KE080522 C 0 C 0 s cheMyd1.KB566561 240190 19 + 486768 -------CCAGCATGTC----CCACTGCGG i cheMyd1.KB566561 C 0 C 0 s anoCar2.chr2 192116755 15 + 199619895 -------CAGAAAGACC----CT----CAA i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654672 15 + 170805979 -------TCCACCTGCGTGGGC-------- i hg38.chr6 C 0 C 0 s mm10.chr17 59096151 15 - 94987271 -------TCCACACATCTGAGC-------- i mm10.chr17 C 0 C 0 s xenTro9.chr8 65203235 5 - 117616046 -------TCTAC------------------ i xenTro9.chr8 N 0 C 0 s gasAcu1.chrUn 27922825 12 + 62550211 CGCCCGTCTCAT------------------ i gasAcu1.chrUn C 0 C 0 a score=-4798.000000 s galGal6.chrUn_NW_020109879v1 333 9 + 1800 atatcccca s pytBiv1.KE956310 32800 9 - 140023 ATGCCCGTG i pytBiv1.KE956310 N 0 C 0 s anoCar2.chr2 192116770 9 + 199619895 AAGGCCACA i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654687 3 + 170805979 ------ACA i hg38.chr6 C 0 I 3 s mm10.chr17 59096166 3 - 94987271 ------AAG i mm10.chr17 C 0 I 3 s xenTro9.chr8 65203240 9 - 117616046 ACATGCACT i xenTro9.chr8 C 0 I 3 s gasAcu1.chrUn 27922837 8 + 62550211 GCACCCCT- i gasAcu1.chrUn C 0 C 0 e cheMyd1.KB566561 240209 0 + 486768 C e araMac1.KE080522 53 0 - 2588 C e tauEry1.JNOY01063823 119 0 - 221 C a score=226.000000 s galGal6.chrUn_NW_020109879v1 342 3 + 1800 ttg s pytBiv1.KE956310 32809 3 - 140023 TTT i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 414875 3 - 744864 TTT i thaSir1.NW_013658169v1 N 0 C 0 s hg38.chr6 30654693 3 + 170805979 TGT i hg38.chr6 I 3 C 0 s mm10.chr17 59096172 3 - 94987271 TAG i mm10.chr17 I 3 C 0 s xenTro9.chr8 65203252 3 - 117616046 TAA i xenTro9.chr8 I 3 C 0 s nanPar1.KN906318v1 991768 3 - 1166527 TTT i nanPar1.KN906318v1 N 0 C 0 e cheMyd1.KB566561 240209 0 + 486768 C e araMac1.KE080522 53 0 - 2588 C e gasAcu1.chrUn 27922845 0 + 62550211 C e anoCar2.chr2 192116779 0 + 199619895 C e tauEry1.JNOY01063823 119 0 - 221 C a score=-1345.000000 s galGal6.chrUn_NW_020109879v1 345 2 + 1800 tc s pytBiv1.KE956310 32812 2 - 140023 TA i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 414878 2 - 744864 TA i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116779 2 + 199619895 AT i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654696 2 + 170805979 TC i hg38.chr6 C 0 I 1 s mm10.chr17 59096175 2 - 94987271 TC i mm10.chr17 C 0 C 0 s xenTro9.chr8 65203255 2 - 117616046 GA i xenTro9.chr8 C 0 C 0 s nanPar1.KN906318v1 991771 2 - 1166527 TT i nanPar1.KN906318v1 C 0 C 0 s tetNig2.chrUn_random 78607080 2 - 107808587 TT i tetNig2.chrUn_random N 0 C 0 e cheMyd1.KB566561 240209 0 + 486768 C e araMac1.KE080522 53 0 - 2588 C e gasAcu1.chrUn 27922845 0 + 62550211 C e tauEry1.JNOY01063823 119 0 - 221 C a score=-2581.000000 s galGal6.chrUn_NW_020109879v1 347 1 + 1800 c s tauEry1.JNOY01063823 119 1 - 221 C i tauEry1.JNOY01063823 C 0 C 0 s araMac1.KE080522 53 1 - 2588 G i araMac1.KE080522 C 0 C 0 s pelSin1.JH205538 133617 1 + 309723 c i pelSin1.JH205538 N 0 C 0 s pytBiv1.KE956310 32814 1 - 140023 G i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 414880 1 - 744864 A i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116781 1 + 199619895 A i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654699 1 + 170805979 C i hg38.chr6 I 1 C 0 s mm10.chr17 59096177 1 - 94987271 C i mm10.chr17 C 0 C 0 s xenTro9.chr8 65203257 1 - 117616046 G i xenTro9.chr8 C 0 C 0 s nanPar1.KN906318v1 991773 1 - 1166527 G i nanPar1.KN906318v1 C 0 C 0 s tetNig2.chrUn_random 78607082 1 - 107808587 C i tetNig2.chrUn_random C 0 C 0 s gasAcu1.chrUn 27922845 1 + 62550211 C i gasAcu1.chrUn C 0 C 0 s danRer11.chr15 34901701 1 + 48040578 C i danRer11.chr15 N 0 C 0 e cheMyd1.KB566561 240209 0 + 486768 C a score=7138.000000 s galGal6.chrUn_NW_020109879v1 348 2 + 1800 cc s tauEry1.JNOY01063823 120 2 - 221 CC i tauEry1.JNOY01063823 C 0 C 0 s araMac1.KE080522 54 2 - 2588 CC i araMac1.KE080522 C 0 C 0 s cheMyd1.KB566561 240209 2 + 486768 CC i cheMyd1.KB566561 C 0 C 0 s pelSin1.JH205538 133618 2 + 309723 cc i pelSin1.JH205538 C 0 C 0 s pytBiv1.KE956310 32815 2 - 140023 CT i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 414881 2 - 744864 CT i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116782 2 + 199619895 CT i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654700 2 + 170805979 CT i hg38.chr6 C 0 C 0 s mm10.chr17 59096178 2 - 94987271 CT i mm10.chr17 C 0 C 0 s xenTro9.chr8 65203258 2 - 117616046 CT i xenTro9.chr8 C 0 C 0 s nanPar1.KN906318v1 991774 2 - 1166527 CT i nanPar1.KN906318v1 C 0 C 0 s oreNil3.chrLG11 5479234 1 + 36466354 -C i oreNil3.chrLG11 N 0 C 0 s mayZeb1.JH720744 568403 1 + 681854 -C i mayZeb1.JH720744 N 0 C 0 s gasAcu1.chrUn 27922846 2 + 62550211 GC i gasAcu1.chrUn C 0 C 0 s danRer11.chr15 34901702 2 + 48040578 TT i danRer11.chr15 C 0 C 0 e tetNig2.chrUn_random 78607083 0 - 107808587 C a score=374.000000 s galGal6.chrUn_NW_020109879v1 350 1 + 1800 c s tauEry1.JNOY01063823 122 1 - 221 C i tauEry1.JNOY01063823 C 0 C 0 s araMac1.KE080522 56 1 - 2588 C i araMac1.KE080522 C 0 C 0 s cheMyd1.KB566561 240211 1 + 486768 G i cheMyd1.KB566561 C 0 I 8 s pelSin1.JH205538 133620 1 + 309723 c i pelSin1.JH205538 C 0 I 8 s pytBiv1.KE956310 32817 1 - 140023 C i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 414883 1 - 744864 C i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116784 1 + 199619895 A i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654702 1 + 170805979 C i hg38.chr6 C 0 C 0 s mm10.chr17 59096180 1 - 94987271 T i mm10.chr17 C 0 C 0 s xenTro9.chr8 65203260 1 - 117616046 G i xenTro9.chr8 C 0 C 0 s nanPar1.KN906318v1 991776 1 - 1166527 T i nanPar1.KN906318v1 C 0 C 0 s tetNig2.chrUn_random 78607083 1 - 107808587 C i tetNig2.chrUn_random C 0 I 2 s oreNil3.chrLG11 5479235 1 + 36466354 C i oreNil3.chrLG11 C 0 I 1 s mayZeb1.JH720744 568404 1 + 681854 C i mayZeb1.JH720744 C 0 I 1 s gasAcu1.chrUn 27922848 1 + 62550211 T i gasAcu1.chrUn C 0 C 0 s danRer11.chr15 34901704 1 + 48040578 C i danRer11.chr15 C 0 C 0 s petMar3.PIZI01000229v1 166366 1 - 179474 c i petMar3.PIZI01000229v1 N 0 C 0 a score=1252837.000000 s galGal6.chrUn_NW_020109879v1 351 59 + 1800 accTGCCGCATGAACTCCTTGGTGGTGAAGACCAGCTCGTGGTAGAGCACCCAGCGGGG s tauEry1.JNOY01063823 123 59 - 221 ACCTGGCGCATGAACTCCTTGGTGGTGAAGACCAGCTCGTGGTAGAGCACCCAGCGCGG i tauEry1.JNOY01063823 C 0 C 0 s araMac1.KE080522 57 59 - 2588 ACCTGCCGCATGAACTCCTTGGTGGTGCAGACGAGCTCGTGGTACAGCACCCAGCGCGG i araMac1.KE080522 C 0 C 0 s allMis1.JH738550 45179 59 + 211077 ACCTGTCTCATGAACTCCTTGGTGGTGAAGACCAGCTCATGGTAGATGAGCCAGCGGGG i allMis1.JH738550 N 0 C 0 s allSin1.KE696820 563656 59 + 732863 ACCTGTCTCATGAACTCCTTGGTGGTGAAGACTAGCTCGTGGTAGATGAGCCAGCGGGG i allSin1.KE696820 N 0 C 0 s cheMyd1.KB566561 240220 59 + 486768 ACCTGTCTCATGAATTCTTTGGTGGTGAAGACCAGCTCGTGGTAGATGAGCCAGCGGGG i cheMyd1.KB566561 I 8 C 0 s pelSin1.JH205538 133629 59 + 309723 acctgTCTCATGAACTCCTTGGTGGTGAAGACCAGCTCGTGGTAGATGAGCCAGCGGGG i pelSin1.JH205538 I 8 C 0 s pytBiv1.KE956310 32818 59 - 140023 ACCTGTCTCATGAATTCCTTAGTGGTGAAGACCAGTTCGTGATAAATGAGCCAGCGGGG i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 414884 59 - 744864 ACCTGTCTCATGAATTCCTTAGTGGTGAAAACCAGTTCATGATAAATGATCCAGCGGGG i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116785 59 + 199619895 ACCTGTCTCATGAATTCTTTAGTTGTGAAGACCAGTTCGTGATAGATGAGCCACCGTGG i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654703 59 + 170805979 ACCTGTCTCATGAACTCTTTGGTGGTCAAGACAAGTTCGTGGTAGAGCAGCCAGCGTGG i hg38.chr6 C 0 C 0 s mm10.chr17 59096181 59 - 94987271 ACTTGTCTCATGAATTCCTTTGTGGTCAAGACAAGCTCATGGTAGAGCAACCAGCGTGG i mm10.chr17 C 0 C 0 s xenTro9.chr8 65203261 59 - 117616046 ACCTGTCTCATATATTCCTTGGTGGTGAAAACCAGCTCATGATATATAACCCAGCGGGG i xenTro9.chr8 C 0 C 0 s xenLae2.chr8S 79962571 59 + 98932710 acctgTCTCATATATTCCTTGGTAGTGAAAACCAGTTCATGATATATAACCCAGCGGGG i xenLae2.chr8S N 0 C 0 s nanPar1.KN906318v1 991777 59 - 1166527 ACCTGTCTCATGTACTCCTTGGTGGTAAAGACAAGTTCATGATATATAACCCAGCGTGG i nanPar1.KN906318v1 C 0 C 0 s tetNig2.chrUn_random 78607086 59 - 107808587 ACCTGGCGCATGAACTCTTTGGTGGTGAAGACCAGCTCGTGGTAGATGATCCAGCGCGG i tetNig2.chrUn_random I 2 C 0 s fr3.chr7 12442760 59 - 14304132 ACCTGTCGCATGAACTCTTTAGTGGTGAACACTAGCTCGTGGTAGATGATCCAGCGAGG i fr3.chr7 N 0 C 0 s oreNil3.chrLG11 5479237 59 + 36466354 ACCTGTCTCATGAACTCCTTGGTGGTGAAGACCAGCTCGTGGTAGATGAGCCAGCGGGG i oreNil3.chrLG11 I 1 C 0 s mayZeb1.JH720744 568406 59 + 681854 ACCTGTCTCATGAACTCCTTGGTGGTGAAGACCAGCTCATGGTAGATGAGCCAGCGGGG i mayZeb1.JH720744 I 1 C 0 s oryLat2.chr16 4531052 59 - 30014384 aCCTGTCTCATGAACTCCTTGGTGGTGAAGACCAGCTCGTGGTAGATGAGCCAACGGGG i oryLat2.chr16 N 0 C 0 s gasAcu1.chrUn 27922849 59 + 62550211 ACCTGTCTCATGAACTCCTTGGTGGTGAACACCAGCTCGTGGTAGATGAGCCAGCGCGG i gasAcu1.chrUn C 0 C 0 s angJap1.KI304500 336065 59 + 497953 ACCTGTCTCATGAACTCTTTGGTGGTGAACACCAGCTCGTGGTAAATGAGCCAGCGTGG i angJap1.KI304500 N 0 C 0 s danRer11.chr15 34901705 59 + 48040578 ACCTGTCTCATGAACTCTTTGGTGGTGAAGACCAGCTCATGGTAGATCATCCATCGCGG i danRer11.chr15 C 0 C 0 s petMar3.PIZI01000229v1 166367 59 - 179474 aCCTGTCTCATGTACTCCTTGGTGGTGAACACCAACTCGTGGTAGAGCAGCCAGCGGGG i petMar3.PIZI01000229v1 C 0 C 0 s letCam1.KE993740 1249736 59 - 2608117 ACCTCGCGCATGTACTCCTTGGTGGTGAGCACCAGCTCGTGGTACACCaccctgtgggg i letCam1.KE993740 N 0 I 673 a score=130649.000000 s galGal6.chrUn_NW_020109879v1 410 7 + 1800 CTGTTCC s tauEry1.JNOY01063823 182 7 - 221 CTGCTCC i tauEry1.JNOY01063823 C 0 C 0 s araMac1.KE080522 116 7 - 2588 CTGCTCC i araMac1.KE080522 C 0 C 0 s allMis1.JH738550 45238 7 + 211077 CTGCTCC i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563715 7 + 732863 CTGCTCC i allSin1.KE696820 C 0 C 0 s cheMyd1.KB566561 240279 7 + 486768 CTGCTCC i cheMyd1.KB566561 C 0 C 0 s pelSin1.JH205538 133688 7 + 309723 CTGCTCC i pelSin1.JH205538 C 0 C 0 s pytBiv1.KE956310 32877 7 - 140023 CTGCTCT i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 414943 7 - 744864 CTGCTCT i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116844 7 + 199619895 CTGTTCT i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654762 7 + 170805979 CTGTTGC i hg38.chr6 C 0 C 0 s mm10.chr17 59096240 7 - 94987271 CTGTTGT i mm10.chr17 C 0 C 0 s xenTro9.chr8 65203320 7 - 117616046 TTGCTCC i xenTro9.chr8 C 0 C 0 s xenLae2.chr8S 79962630 7 + 98932710 CTGCTCC i xenLae2.chr8S C 0 C 0 s nanPar1.KN906318v1 991836 7 - 1166527 CTGTTCT i nanPar1.KN906318v1 C 0 C 0 s tetNig2.chrUn_random 78607145 7 - 107808587 CAGCTCT i tetNig2.chrUn_random C 0 C 0 s fr3.chr7 12442819 7 - 14304132 CAGCTCT i fr3.chr7 C 0 C 0 s oreNil3.chrLG11 5479296 7 + 36466354 CTGCTCC i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720744 568465 7 + 681854 CTGCTCC i mayZeb1.JH720744 C 0 C 0 s oryLat2.chr16 4531111 7 - 30014384 CTGCTCC i oryLat2.chr16 C 0 C 0 s gasAcu1.chrUn 27922908 7 + 62550211 CTGCTCC i gasAcu1.chrUn C 0 C 0 s angJap1.KI304500 336124 7 + 497953 CTGCTCC i angJap1.KI304500 C 0 C 0 s danRer11.chr15 34901764 7 + 48040578 CTGCTCC i danRer11.chr15 C 0 C 0 s petMar3.PIZI01000229v1 166426 7 - 179474 TTGCTCG i petMar3.PIZI01000229v1 C 0 C 0 e letCam1.KE993740 1249795 673 - 2608117 I a score=134883.000000 s galGal6.chrUn_NW_020109879v1 417 10 + 1800 TCAAAGAGGG s tauEry1.JNOY01063823 189 10 - 221 TCGAACAGGG i tauEry1.JNOY01063823 C 0 C 0 s araMac1.KE080522 123 10 - 2588 TCGAAGAGGG i araMac1.KE080522 C 0 N 0 s allMis1.JH738550 45245 10 + 211077 TCAAAGAGGC i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563722 10 + 732863 TCAAAGAGGC i allSin1.KE696820 C 0 C 0 s cheMyd1.KB566561 240286 10 + 486768 TCGAAGAGGC i cheMyd1.KB566561 C 0 C 0 s pelSin1.JH205538 133695 10 + 309723 TCGAACAGGC i pelSin1.JH205538 C 0 C 0 s pytBiv1.KE956310 32884 10 - 140023 TCAAACAAGG i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 414950 10 - 744864 TCAAACAAGG i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116851 10 + 199619895 TCAAACAGAG i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654769 10 + 170805979 TCAAAGAGGG i hg38.chr6 C 0 C 0 s mm10.chr17 59096247 10 - 94987271 TCAAAGAGAG i mm10.chr17 C 0 C 0 s xenTro9.chr8 65203327 10 - 117616046 TCATGAAGAC i xenTro9.chr8 C 0 C 0 s xenLae2.chr8S 79962637 10 + 98932710 TCGTGTAGAC i xenLae2.chr8S C 0 C 0 s nanPar1.KN906318v1 991843 10 - 1166527 TCGTGCAGAC i nanPar1.KN906318v1 C 0 C 0 s tetNig2.chrUn_random 78607152 10 - 107808587 TCGAAGAGCG i tetNig2.chrUn_random C 0 C 0 s fr3.chr7 12442826 10 - 14304132 TCGAAAAGGG i fr3.chr7 C 0 C 0 s oreNil3.chrLG11 5479303 10 + 36466354 TCAAACAGAG i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720744 568472 10 + 681854 TCAAACAGAG i mayZeb1.JH720744 C 0 C 0 s oryLat2.chr16 4531118 10 - 30014384 TCAAACAGGG i oryLat2.chr16 C 0 C 0 s gasAcu1.chrUn 27922915 10 + 62550211 TCGAACAAAG i gasAcu1.chrUn C 0 C 0 s angJap1.KI304500 336131 10 + 497953 TCGAACAGGG i angJap1.KI304500 C 0 C 0 s danRer11.chr15 34901771 10 + 48040578 TCAAACAGTG i danRer11.chr15 C 0 C 0 s petMar3.PIZI01000229v1 166433 10 - 179474 TCGAAGAGGC i petMar3.PIZI01000229v1 C 0 C 0 s letCam1.KE993740 1250468 10 - 2608117 TTGAAGAGCG i letCam1.KE993740 I 673 C 0 a score=344382.000000 s galGal6.chrUn_NW_020109879v1 427 22 + 1800 AACTGTTGGGGTGGATGTAAAC s tauEry1.JNOY01063823 199 22 - 221 CGCTGTTGGGGTGGATGAAAAC i tauEry1.JNOY01063823 C 0 N 0 s allMis1.JH738550 45255 22 + 211077 AGCTGTTGGGGTGGATGAACAC i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563732 22 + 732863 AGCTGTTGGGGTGGATGAACAC i allSin1.KE696820 C 0 C 0 s cheMyd1.KB566561 240296 22 + 486768 AGCTGTTGGGGTGGACAAAGAC i cheMyd1.KB566561 C 0 C 0 s pelSin1.JH205538 133705 22 + 309723 AGCTGTTGGGGTGGACGAAGAC i pelSin1.JH205538 C 0 C 0 s pytBiv1.KE956310 32894 22 - 140023 AGCTGTTGGGATGGATGTACAC i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 414960 22 - 744864 AGCTGTTGGGATGGATATACAC i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116861 22 + 199619895 AACTGTTTGGGTGGACAAACAC i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654779 22 + 170805979 AGGAGTTGGGATGAATGAAGAC i hg38.chr6 C 0 C 0 s mm10.chr17 59096257 22 - 94987271 AGGAGTTGGGATGAATAAACAC i mm10.chr17 C 0 C 0 s xenTro9.chr8 65203337 22 - 117616046 TGCTATTTGGATGGATATATAC i xenTro9.chr8 C 0 C 0 s xenLae2.chr8S 79962647 22 + 98932710 TGCTGTTAGGATGGATATAGAC i xenLae2.chr8S C 0 C 0 s nanPar1.KN906318v1 991853 22 - 1166527 TGCTGTTTGGATGTACGAATAC i nanPar1.KN906318v1 C 0 C 0 s tetNig2.chrUn_random 78607162 22 - 107808587 AGCTGTTGGGGTGCACGAACAC i tetNig2.chrUn_random C 0 C 0 s fr3.chr7 12442836 22 - 14304132 AACTGTTTGGGTGGACGAAGAC i fr3.chr7 C 0 C 0 s oreNil3.chrLG11 5479313 22 + 36466354 AGCTGTTGGGGTGCACGTAAAC i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720744 568482 22 + 681854 AGCTGTTGGGGTGCACGTAAAC i mayZeb1.JH720744 C 0 C 0 s oryLat2.chr16 4531128 22 - 30014384 AGCTGTTGGGGTGGGTGTAGAC i oryLat2.chr16 C 0 C 0 s gasAcu1.chrUn 27922925 22 + 62550211 AGCTGTTGGGGTGGACGTAGAC i gasAcu1.chrUn C 0 C 0 s angJap1.KI304500 336141 22 + 497953 AGCTGTTAGGGTGAACGTAAAC i angJap1.KI304500 C 0 C 0 s danRer11.chr15 34901781 22 + 48040578 AGCTGTTGGGATGGACGTAAAC i danRer11.chr15 C 0 C 0 s petMar3.PIZI01000229v1 166443 22 - 179474 AGCTGTTGGGGTGCACGTGaac i petMar3.PIZI01000229v1 C 0 C 0 s letCam1.KE993740 1250478 22 - 2608117 CGCTGGACGGGTGGATGTAGAC i letCam1.KE993740 C 0 C 0 a score=542466.000000 s galGal6.chrUn_NW_020109879v1 449 45 + 1800 TGTCTGCTGGTGCTTCACTGTCCGGTAGCCACCGCGTGTCAGCCG s allMis1.JH738550 45277 45 + 211077 TGTTTGCTGATGTTTCACTGTCTTGTAGCCGGTGCGGGTCAGCCG i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563754 45 + 732863 TGTTTGCTGATGTTTCACTGTCTTGTAGCCGGTGCGGGTCAGCCG i allSin1.KE696820 C 0 C 0 s cheMyd1.KB566561 240318 45 + 486768 CGTCTGCTGGTGCTTGACCGTCTTGTAGCCGGTGCGGGTCAGGCG i cheMyd1.KB566561 C 0 C 0 s pelSin1.JH205538 133727 45 + 309723 TGTCTGCTGGTGCTTGACCGTCTTGTAGCCGGTGCGGGTCAGGCG i pelSin1.JH205538 C 0 N 0 s pytBiv1.KE956310 32916 45 - 140023 AGTTTGCTGATGCTTGACTGTTTTGTAACCGCTACGGGTTAGCCG i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 414982 45 - 744864 TGTCTGCTGATGCTTGACCGTTTTGTAACCACTGCGGGTTAGCCG i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116883 45 + 199619895 TGTCTGCTGGTGCTTAACTGTCTTGTAACCGGTGCGGGTGAGACG i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654801 45 + 170805979 TGTCTGCTGCTGTTTCACTGTGCGGTAGCCACTCCGAGTCAACCG i hg38.chr6 C 0 C 0 s mm10.chr17 59096279 45 - 94987271 TGTCTGCTGCTGCTTCACTGTGCGGTAGCCGCTCCGAGTCAGCCT i mm10.chr17 C 0 C 0 s xenTro9.chr8 65203359 45 - 117616046 AGCCTGCTGCTGTTTGACAGTCTTGTATCCACTACGAGTAAGACG i xenTro9.chr8 C 0 C 0 s xenLae2.chr8S 79962669 45 + 98932710 AGCCTGCTGTTGTTTAACAGTCTTGTATCCACTACGAGTAAGACG i xenLae2.chr8S C 0 C 0 s nanPar1.KN906318v1 991875 45 - 1166527 GGCTTGCTGCTGCTTCACTGTCTTGTAGCCGCTGCGGGAGAGCCG i nanPar1.KN906318v1 C 0 C 0 s tetNig2.chrUn_random 78607184 45 - 107808587 CGTCTGCTGGTGCTTCACTGTTTTGTAGCCGCCCTTACTGAGTCG i tetNig2.chrUn_random C 0 C 0 s fr3.chr7 12442858 45 - 14304132 CGTCTGCTGGTGCTTCACTGTCTTGTAGCCGCCCTTACTGAGGCG i fr3.chr7 C 0 C 0 s oreNil3.chrLG11 5479335 45 + 36466354 AGTCTGCTGGTGCTTCACAGTCTTGTAGCCTCCTTTGCTCAGTCT i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720744 568504 45 + 681854 AGTCTGCTGGTGCTTCACAGTCTTGTAGCCTCCTTTGCTCAGTCT i mayZeb1.JH720744 C 0 C 0 s oryLat2.chr16 4531150 45 - 30014384 CGTCTGCTGGTGCTTCACCGTCTTGTAGCCGCCTTTGCTGAGCCG i oryLat2.chr16 C 0 C 0 s gasAcu1.chrUn 27922947 45 + 62550211 CGTCTGCTGGTGTTTCACCGTTTTGTAGCCCCCTTTGTTCAGTCG i gasAcu1.chrUn C 0 C 0 s angJap1.KI304500 336163 45 + 497953 CGTCTGCTGGTGCTTCACCGTCTTGTAGCCCCCTTTGCTGAGCCG i angJap1.KI304500 C 0 C 0 s danRer11.chr15 34901803 45 + 48040578 TGTCTGCTGGTGTTTTACCGTTTTATATCCCCCTTTACTCAACCG i danRer11.chr15 C 0 C 0 s petMar3.PIZI01000229v1 166465 45 - 179474 ctgctgctggtgcttcACCGTCTTGTAGCCGCCCTTGGTGAGGCG i petMar3.PIZI01000229v1 C 0 C 0 s letCam1.KE993740 1250500 41 - 2608117 CACCTGCTGGTCCACCAGCGTGCGGTAGCCTTCC----TGAGGGT i letCam1.KE993740 C 0 C 0 a score=416505.000000 s galGal6.chrUn_NW_020109879v1 494 35 + 1800 -------GGCCGTGTGGTAGAAGAAACCTGCAGTGATGGCct s allMis1.JH738550 45322 35 + 211077 -------GGCCGTGTGGTAGAAGAAGCCGGCTGTAATGGCCT i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563799 35 + 732863 -------GGCCGTGTGGTAGAAGAAGCCAGCTGTAATGGCCT i allSin1.KE696820 C 0 C 0 s cheMyd1.KB566561 240363 35 + 486768 -------GGCCGTGTGGTAGAAGAAGCCAGCGGTGATGgcct i cheMyd1.KB566561 C 0 C 0 s pytBiv1.KE956310 32961 35 - 140023 -------GGCAGTGTGATAAAAGAAACCAGCTGTTATGGCCT i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 415027 35 - 744864 -------GGCAGTGTGATAAAAGAAACCGGCTGTTACAGCCT i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116928 35 + 199619895 -------GGCCGTGTGATAGAAGAAACCAGCAGTGATGGCCT i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654846 35 + 170805979 -------TGCCGTGTGGTAAAAGTAACCAGCAGTGATGGCCT i hg38.chr6 C 0 C 0 s mm10.chr17 59096324 35 - 94987271 -------CGCAGTGTGGTAAAAATAACCCGAAGTGATGGCCT i mm10.chr17 C 0 C 0 s xenTro9.chr8 65203404 35 - 117616046 -------TGCCGTGTGGTAGAAATATCCAGCTGTGATTGCCT i xenTro9.chr8 C 0 N 0 s xenLae2.chr8S 79962714 35 + 98932710 -------TGCGGTGTGGTAGAAATATccggctgtgattgcct i xenLae2.chr8S C 0 N 0 s nanPar1.KN906318v1 991920 35 - 1166527 -------AGCCGTGTGGTAGAAATAGCCAGCTGTGATAGCCT i nanPar1.KN906318v1 C 0 C 0 s tetNig2.chrUn_random 78607229 35 - 107808587 -------GGCCGTGTGGTAGAAATAACCGGCGGTGACGGCCT i tetNig2.chrUn_random C 0 C 0 s fr3.chr7 12442903 35 - 14304132 -------CGCGGTGTGATAGAAATAACCAGCTGTTACAGCCT i fr3.chr7 C 0 C 0 s oreNil3.chrLG11 5479380 35 + 36466354 -------GGCCGTGTGATAGAAATATCCTGCAGTCACCGCCT i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720744 568549 35 + 681854 -------GGCCGTGTGATAGAAATATCCTGCAGTCACCGCCT i mayZeb1.JH720744 C 0 C 0 s oryLat2.chr16 4531195 35 - 30014384 -------GGCTGTGTGGTAGAAGTACCCGGCTGTCACTGCCT i oryLat2.chr16 C 0 C 0 s gasAcu1.chrUn 27922992 35 + 62550211 -------CGCCGTGTGATAAAAATATCCCGCCGTCACCCCCT i gasAcu1.chrUn C 0 C 0 s angJap1.KI304500 336208 35 + 497953 -------CGCTGTGTGGTAGAAGTACCCCGCAGTTAccgcct i angJap1.KI304500 C 0 C 0 s danRer11.chr15 34901848 35 + 48040578 -------TGCTGTATGGTAGAAATATCCCGCAGTTACTGCCT i danRer11.chr15 C 0 C 0 s petMar3.PIZI01000229v1 166510 35 - 179474 C-------GACGTGTTGTAGAAGAAACCTGCGGTAATCGCCT i petMar3.PIZI01000229v1 C 0 C 0 s letCam1.KE993740 1250541 42 - 2608117 CCTTCTTTgctgcgttcctgaagaagccaCTCAGCACGGCCT i letCam1.KE993740 C 0 N 0 a score=1722.000000 s galGal6.chrUn_NW_020109879v1 529 1 + 1800 g s allMis1.JH738550 45357 1 + 211077 G i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563834 1 + 732863 G i allSin1.KE696820 C 0 C 0 s cheMyd1.KB566561 240398 1 + 486768 g i cheMyd1.KB566561 C 0 C 0 s pytBiv1.KE956310 32996 1 - 140023 G i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 415062 1 - 744864 A i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116963 1 + 199619895 G i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654881 1 + 170805979 A i hg38.chr6 C 0 C 0 s mm10.chr17 59096359 1 - 94987271 A i mm10.chr17 C 0 C 0 s petMar3.PIZI01000229v1 166545 1 - 179474 G i petMar3.PIZI01000229v1 C 0 N 0 e angJap1.KI304500 336243 0 + 497953 C e oryLat2.chr16 4531230 0 - 30014384 C e fr3.chr7 12442938 0 - 14304132 C e mayZeb1.JH720744 568584 0 + 681854 C e oreNil3.chrLG11 5479415 0 + 36466354 C e danRer11.chr15 34901883 0 + 48040578 C e tetNig2.chrUn_random 78607264 0 - 107808587 C e nanPar1.KN906318v1 991955 0 - 1166527 C e gasAcu1.chrUn 27923027 0 + 62550211 C a score=-48110.000000 s galGal6.chrUn_NW_020109879v1 530 8 + 1800 ---gggggggg- s allMis1.JH738550 45358 11 + 211077 TCAGAGGGAGA- i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563835 11 + 732863 TCAGAGGGAGA- i allSin1.KE696820 C 0 C 0 s cheMyd1.KB566561 240399 8 + 486768 ---ggaagggg- i cheMyd1.KB566561 C 0 C 0 s pytBiv1.KE956310 32997 10 - 140023 -TAGAAACAGA- i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 415063 10 - 744864 -TAGAAACAGA- i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116964 10 + 199619895 -TGGACAGAGA- i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654882 8 + 170805979 ---AGGAGCGG- i hg38.chr6 C 0 C 0 s mm10.chr17 59096360 8 - 94987271 ---AGGAGCAG- i mm10.chr17 C 0 C 0 s nanPar1.KN906318v1 991955 8 - 1166527 ---AGCAGAGA- i nanPar1.KN906318v1 C 0 C 0 s tetNig2.chrUn_random 78607264 9 - 107808587 ---GGAGGGTTG i tetNig2.chrUn_random C 0 C 0 s fr3.chr7 12442938 9 - 14304132 ---GGAGGATGA i fr3.chr7 C 0 C 0 s oreNil3.chrLG11 5479415 4 + 36466354 ---GCAG----- i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720744 568584 3 + 681854 ---GCA------ i mayZeb1.JH720744 C 0 C 0 s oryLat2.chr16 4531230 3 - 30014384 ---GAG------ i oryLat2.chr16 C 0 C 0 s gasAcu1.chrUn 27923027 9 + 62550211 ---GGTGgagag i gasAcu1.chrUn C 0 C 0 s angJap1.KI304500 336243 9 + 497953 ---gagagagag i angJap1.KI304500 C 0 I 1 s danRer11.chr15 34901883 9 + 48040578 ---GGAAGAAGG i danRer11.chr15 C 0 N 0 a score=-19277.000000 s galGal6.chrUn_NW_020109879v1 538 5 + 1800 tcggg s allMis1.JH738550 45369 5 + 211077 GCGGT i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563846 5 + 732863 GCGGT i allSin1.KE696820 C 0 C 0 s cheMyd1.KB566561 240407 5 + 486768 ggggg i cheMyd1.KB566561 C 0 C 0 s pytBiv1.KE956310 33007 5 - 140023 GCAGG i pytBiv1.KE956310 C 0 C 0 s thaSir1.NW_013658169v1 415073 5 - 744864 GCAGG i thaSir1.NW_013658169v1 C 0 C 0 s anoCar2.chr2 192116974 5 + 199619895 GCAAT i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654890 5 + 170805979 GCAGG i hg38.chr6 C 0 C 0 s mm10.chr17 59096368 5 - 94987271 GCAAG i mm10.chr17 C 0 N 0 s nanPar1.KN906318v1 991963 5 - 1166527 ACAGA i nanPar1.KN906318v1 C 0 I 1 s tetNig2.chrUn_random 78607273 3 - 107808587 GAA-- i tetNig2.chrUn_random C 0 I 1 s fr3.chr7 12442947 3 - 14304132 GCA-- i fr3.chr7 C 0 C 0 s oreNil3.chrLG11 5479419 3 + 36466354 GAA-- i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720744 568587 3 + 681854 GAA-- i mayZeb1.JH720744 C 0 C 0 s oryLat2.chr16 4531233 3 - 30014384 AGA-- i oryLat2.chr16 C 0 C 0 s gasAcu1.chrUn 27923036 3 + 62550211 aga-- i gasAcu1.chrUn C 0 C 0 e angJap1.KI304500 336252 1 + 497953 I a score=-21132.000000 s galGal6.chrUn_NW_020109879v1 543 5 + 1800 gggtg- s allMis1.JH738550 45374 5 + 211077 CAGGG- i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563851 5 + 732863 CAGGG- i allSin1.KE696820 C 0 C 0 s cheMyd1.KB566561 240412 5 + 486768 ggggg- i cheMyd1.KB566561 C 0 N 0 s pytBiv1.KE956310 33012 5 - 140023 AAGGG- i pytBiv1.KE956310 C 0 I 2 s thaSir1.NW_013658169v1 415078 5 - 744864 AAGGG- i thaSir1.NW_013658169v1 C 0 I 2 s anoCar2.chr2 192116979 5 + 199619895 GGATG- i anoCar2.chr2 C 0 C 0 s hg38.chr6 30654895 3 + 170805979 AAA--- i hg38.chr6 C 0 C 0 s nanPar1.KN906318v1 991969 2 - 1166527 ---GG- i nanPar1.KN906318v1 I 1 C 0 s tetNig2.chrUn_random 78607277 5 - 107808587 -GAAGC i tetNig2.chrUn_random I 1 C 0 s fr3.chr7 12442950 5 - 14304132 -GAAGC i fr3.chr7 C 0 C 0 s oreNil3.chrLG11 5479422 5 + 36466354 -GGGGA i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720744 568590 5 + 681854 -GGGGA i mayZeb1.JH720744 C 0 C 0 s oryLat2.chr16 4531236 5 - 30014384 -GAGGC i oryLat2.chr16 C 0 C 0 s gasAcu1.chrUn 27923039 5 + 62550211 -gagag i gasAcu1.chrUn C 0 C 0 s angJap1.KI304500 336253 5 + 497953 -gaggc i angJap1.KI304500 I 1 C 0 a score=-77673.000000 s galGal6.chrUn_NW_020109879v1 548 6 + 1800 ------------------------------------------------------tt-atag s allMis1.JH738550 45379 6 + 211077 ------------------------------------------------------TC-ACAA i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563856 6 + 732863 ------------------------------------------------------TC-ACAA i allSin1.KE696820 C 0 C 0 s anoCar2.chr2 192116984 6 + 199619895 ------------------------------------------------------CC-ACAG i anoCar2.chr2 C 0 N 0 s hg38.chr6 30654898 5 + 170805979 -------------------------------------------------------G-AAAA i hg38.chr6 C 0 C 0 s nanPar1.KN906318v1 991971 6 - 1166527 ------------------------------------------------------TA-ATAG i nanPar1.KN906318v1 C 0 C 0 s tetNig2.chrUn_random 78607282 6 - 107808587 A---------------------------------------------------GGAA-A--- i tetNig2.chrUn_random C 0 C 0 s fr3.chr7 12442955 6 - 14304132 A---------------------------------------------------GGTT-A--- i fr3.chr7 C 0 C 0 s oreNil3.chrLG11 5479427 6 + 36466354 A---------------------------------------------------GATA-A--- i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720744 568595 6 + 681854 G---------------------------------------------------GATA-A--- i mayZeb1.JH720744 C 0 C 0 s oryLat2.chr16 4531241 29 - 30014384 A-----CAAACCCTTATG----------------AGACTCA-------GCATGACA-A--- i oryLat2.chr16 C 0 C 0 s gasAcu1.chrUn 27923044 7 + 62550211 a---------------------------------------------------gagaga--- i gasAcu1.chrUn C 0 C 0 s angJap1.KI304500 336258 57 + 497953 aagGAGCCAACGCGTTTAACCTTCCCACCAACACAAACCCACGCAACCTCAGCaca-a--- i angJap1.KI304500 C 0 C 0 e thaSir1.NW_013658169v1 415083 2 - 744864 I e pytBiv1.KE956310 33017 2 - 140023 I a score=-40629.000000 s galGal6.chrUn_NW_020109879v1 554 20 + 1800 cca-atggg-g--------ggggtaaatgg s allMis1.JH738550 45385 21 + 211077 ACAGACAGT-G--------TGTGCACAGGG i allMis1.JH738550 C 0 I 3 s allSin1.KE696820 563862 21 + 732863 ACAGACAGA-G--------TGTGCACAGGG i allSin1.KE696820 C 0 I 3 s pytBiv1.KE956310 33019 21 - 140023 AAAAGTGAg-g--------gggggAAATGA i pytBiv1.KE956310 I 2 C 0 s thaSir1.NW_013658169v1 415085 29 - 744864 AAATGTGAG-GTAGACAATGAAAGAAATGG i thaSir1.NW_013658169v1 I 2 N 0 s hg38.chr6 30654903 13 + 170805979 -----------------TCAATGGAAAAGG i hg38.chr6 C 0 C 0 s nanPar1.KN906318v1 991977 19 - 1166527 CAAGGTGAG-G----------ATTAAATGG i nanPar1.KN906318v1 C 0 N 0 s tetNig2.chrUn_random 78607288 20 - 107808587 -GAAACGGT-G--------ACCGTGGGTGT i tetNig2.chrUn_random C 0 C 0 s fr3.chr7 12442961 20 - 14304132 -TAAATAGA-G--------AATTTTGGTGA i fr3.chr7 C 0 C 0 s oreNil3.chrLG11 5479433 21 + 36466354 -GAGACAGAGG--------AGGGCAGATGG i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720744 568601 21 + 681854 -GAAGCAGTGG--------AGGGCAGATGG i mayZeb1.JH720744 C 0 C 0 s oryLat2.chr16 4531270 20 - 30014384 -CAAGGATT-T--------ggtgtgtatgt i oryLat2.chr16 C 0 C 0 s gasAcu1.chrUn 27923051 20 + 62550211 -gagagaga-g--------agagagagaga i gasAcu1.chrUn C 0 C 0 s angJap1.KI304500 336315 12 + 497953 -gagacaga-g--------atg-------- i angJap1.KI304500 C 0 C 0 a score=-1026.000000 s galGal6.chrUn_NW_020109879v1 574 1 + 1800 g s allMis1.JH738550 45409 1 + 211077 A i allMis1.JH738550 I 3 C 0 s allSin1.KE696820 563886 1 + 732863 A i allSin1.KE696820 I 3 C 0 s hg38.chr6 30654916 1 + 170805979 C i hg38.chr6 C 0 C 0 s tetNig2.chrUn_random 78607308 1 - 107808587 C i tetNig2.chrUn_random C 0 C 0 s fr3.chr7 12442981 1 - 14304132 A i fr3.chr7 C 0 C 0 s oreNil3.chrLG11 5479454 1 + 36466354 G i oreNil3.chrLG11 C 0 N 0 s mayZeb1.JH720744 568622 1 + 681854 G i mayZeb1.JH720744 C 0 N 0 s oryLat2.chr16 4531290 1 - 30014384 g i oryLat2.chr16 C 0 I 2 s gasAcu1.chrUn 27923071 1 + 62550211 g i gasAcu1.chrUn C 0 I 1 e angJap1.KI304500 336327 0 + 497953 C e pytBiv1.KE956310 33040 0 - 140023 C a score=-9912.000000 s galGal6.chrUn_NW_020109879v1 575 12 + 1800 gggcaa-tggggg s allMis1.JH738550 45410 12 + 211077 GGGCAA-GGTTTA i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563887 12 + 732863 GGGCAA-GGTTTA i allSin1.KE696820 C 0 C 0 s pytBiv1.KE956310 33040 13 - 140023 AGACAACTGAAAA i pytBiv1.KE956310 C 0 C 0 s hg38.chr6 30654917 13 + 170805979 AGACATCTGGGGA i hg38.chr6 C 0 C 0 s tetNig2.chrUn_random 78607309 12 - 107808587 GAGCAC-AGGGAG i tetNig2.chrUn_random C 0 N 0 s fr3.chr7 12442982 12 - 14304132 AAGAAA-AGTTAG i fr3.chr7 C 0 C 0 s oryLat2.chr16 4531293 6 - 30014384 -------tgtgtg i oryLat2.chr16 I 2 I 6 s gasAcu1.chrUn 27923073 11 + 62550211 -gagag-agagag i gasAcu1.chrUn I 1 I 1 s angJap1.KI304500 336327 3 + 497953 ----------caG i angJap1.KI304500 C 0 I 9 a score=-11781.000000 s galGal6.chrUn_NW_020109879v1 587 2 + 1800 gg- s allMis1.JH738550 45422 2 + 211077 CC- i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563899 2 + 732863 CC- i allSin1.KE696820 C 0 C 0 s pytBiv1.KE956310 33053 2 - 140023 TG- i pytBiv1.KE956310 C 0 C 0 s hg38.chr6 30654930 2 + 170805979 CC- i hg38.chr6 C 0 C 0 s fr3.chr7 12442994 2 - 14304132 -AG i fr3.chr7 C 0 C 0 s oryLat2.chr16 4531305 2 - 30014384 -gg i oryLat2.chr16 I 6 C 0 s gasAcu1.chrUn 27923085 2 + 62550211 -gG i gasAcu1.chrUn I 1 N 0 s angJap1.KI304500 336339 1 + 497953 --a i angJap1.KI304500 I 9 I 4 a score=1273.000000 s galGal6.chrUn_NW_020109879v1 589 6 + 1800 ctgggg s allMis1.JH738550 45424 6 + 211077 TTGCGG i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563901 6 + 732863 TTGCGG i allSin1.KE696820 C 0 C 0 s pytBiv1.KE956310 33055 6 - 140023 CTGAAG i pytBiv1.KE956310 C 0 N 0 s hg38.chr6 30654932 5 + 170805979 CTAAG- i hg38.chr6 C 0 C 0 s fr3.chr7 12442996 6 - 14304132 CCAAGG i fr3.chr7 C 0 C 0 s oryLat2.chr16 4531307 6 - 30014384 gtgggg i oryLat2.chr16 C 0 C 0 s angJap1.KI304500 336344 6 + 497953 gtgaga i angJap1.KI304500 I 4 C 0 a score=-4289.000000 s galGal6.chrUn_NW_020109879v1 595 6 + 1800 ggggaa--- s allMis1.JH738550 45430 6 + 211077 ATGGGA--- i allMis1.JH738550 C 0 C 0 s allSin1.KE696820 563907 6 + 732863 ATGGGA--- i allSin1.KE696820 C 0 C 0 s hg38.chr6 30654937 1 + 170805979 -----A--- i hg38.chr6 C 0 C 0 s fr3.chr7 12443002 6 - 14304132 ---GAATAA i fr3.chr7 C 0 N 0 s oryLat2.chr16 4531313 6 - 30014384 ---gggtgt i oryLat2.chr16 C 0 C 0 s angJap1.KI304500 336350 3 + 497953 ---gga--- i angJap1.KI304500 C 0 C 0 a score=-3315.000000 s galGal6.chrUn_NW_020109879v1 601 3 + 1800 -atg s allMis1.JH738550 45436 3 + 211077 -ACG i allMis1.JH738550 C 0 N 0 s allSin1.KE696820 563913 3 + 732863 -ACG i allSin1.KE696820 C 0 N 0 s hg38.chr6 30654938 3 + 170805979 -ATG i hg38.chr6 C 0 I 14 s oryLat2.chr16 4531319 3 - 30014384 ctT- i oryLat2.chr16 C 0 C 0 s angJap1.KI304500 336353 3 + 497953 gag- i angJap1.KI304500 C 0 C 0 a score=101.000000 s galGal6.chrUn_NW_020109879v1 604 11 + 1800 atggagtttgg s hg38.chr6 30654955 11 + 170805979 TTCAGGCTTCA i hg38.chr6 I 14 C 0 s oryLat2.chr16 4531322 11 - 30014384 ATGGCTTATGG i oryLat2.chr16 C 0 N 0 s angJap1.KI304500 336356 11 + 497953 atggagtcAGG i angJap1.KI304500 C 0 I 14 a score=-5722.000000 s galGal6.chrUn_NW_020109879v1 615 199 + 1800 ggggtattaaggggtttggggggggatgatggggtt--tgggagggaatgatggggttttgaggggtgttatagtcctggggggata----------aaggaggagaatgggggggctgg-----gg--gggaaatgatggagtttgggggggaatgatggggtttgggggggaatgatggggtttggggggga----atgatggggttttgagggggtgtt- s hg38.chr6 30654966 205 + 170805979 GGAAAACTAGAGAGGTAAGGAATGCATGAAGAACTTCCCAGGAATGAACCTTCAGTGGTCTGGGGAAGAAAGGGCCCTGGGAGGACACGTCATACACAAGGGGAAGAGGGCATGCTCTCA-CGCTGG--AGGAAATGCTGCATGCCCCCAGAGAA-GCTTGCTCCTGGGAAGGTA---------CTGGGGGTGG----AAAGCAGGAGGCTGAAGAAATGCT- i hg38.chr6 C 0 N 0 s angJap1.KI304500 336381 202 + 497953 TGTGTGTGGGGTGACTGGTGTATGGATAATGGAGGTAGCAGTAGAG-----TCAGTTAGAGGTGATGGAGGTAGCTATAGGGTAACT-GTTACA---GAGGTGATGGAAGTGGGTGTAGGGTGCCAGTTACAGAGTGATGGAGGTGGGTGTAG---GGTGACAGTTATAGAGATA---------ATGGAGGTGGGTGTAGAGTGAGGTATAGAGGTAATGGAG i angJap1.KI304500 I 14 C 0 a score=1278.000000 s galGal6.chrUn_NW_020109879v1 814 74 + 1800 atagtcactgggggggataagggggagaatgggggggctg-ggggggaatgatggagtttggggaggaatgaggg s angJap1.KI304500 336583 71 + 497953 ATGGGTGTAGAGTGAGGTATAAAGGAGATTGAGGTTGGTGTAGAGTGAATGGTGA----TGGGGATGGATGTAGG i angJap1.KI304500 C 0 N 0