##maf version=1 scoring=roast.v3.3 a score=1224.000000 s galGal6.chrUn_NW_020109905v1 77 58 + 2898 gaaagggaacagcatggagctgtgtcagaggAGGG------TCgggtgggggttagggaaaggg s picPub1.KL216911 396423 59 + 1622813 gagagggaacggattgaagctt-----gaggagggcagatttagcctggagattaggaagacat i picPub1.KL216911 N 0 C 0 a score=602.000000 s galGal6.chrUn_NW_020109905v1 135 3 + 2898 tct s lepDis1.KK669342 12783 3 - 13883 CCT i lepDis1.KK669342 N 0 I 102 s picPub1.KL216911 396482 3 + 1622813 tct i picPub1.KL216911 C 0 C 0 a score=637.000000 s galGal6.chrUn_NW_020109905v1 138 50 + 2898 gcacca-----gtgggca-----tggagcaggctgcccagggtga-tgggcacggccctga s picPub1.KL216911 396485 61 + 1622813 ttacagagagggtggggagacactggaacaggctgcccagggaggctgtggatgtcccctc i picPub1.KL216911 C 0 C 0 e lepDis1.KK669342 12786 102 - 13883 I a score=304.000000 s galGal6.chrUn_NW_020109905v1 188 10 + 2898 gctgctgcag s fulGla1.KK610899 38230 8 - 40935 gctg--gcag i fulGla1.KK610899 N 0 C 0 s picPub1.KL216911 396546 8 + 1622813 cctg--gagg i picPub1.KL216911 C 0 C 0 e lepDis1.KK669342 12786 102 - 13883 I a score=-1328.000000 s galGal6.chrUn_NW_020109905v1 198 2 + 2898 -ct s fulGla1.KK610899 38238 2 - 40935 -tg i fulGla1.KK610899 C 0 I 13 s picPub1.KL216911 396554 2 + 1622813 -tg i picPub1.KL216911 C 0 I 2 s pelSin1.JH207533 1158813 2 - 1270565 CT- i pelSin1.JH207533 N 0 C 0 e lepDis1.KK669342 12786 102 - 13883 I a score=-861.000000 s galGal6.chrUn_NW_020109905v1 200 9 + 2898 cagggagcG-- s picPub1.KL216911 396558 9 + 1622813 caaggccag-- i picPub1.KL216911 I 2 C 0 s pelSin1.JH207533 1158815 9 - 1270565 --GAGGCTGTG i pelSin1.JH207533 C 0 C 0 e fulGla1.KK610899 38240 13 - 40935 I e lepDis1.KK669342 12786 102 - 13883 I a score=-529.000000 s galGal6.chrUn_NW_020109905v1 209 4 + 2898 TTGG- s cotJap2.chr2 39347739 4 - 134823679 tttg- i cotJap2.chr2 N 0 C 0 s picPub1.KL216911 396567 4 + 1622813 cttg- i picPub1.KL216911 C 0 C 0 s pelSin1.JH207533 1158824 4 - 1270565 -TCGT i pelSin1.JH207533 C 0 C 0 e fulGla1.KK610899 38240 13 - 40935 I e lepDis1.KK669342 12786 102 - 13883 I a score=-581.000000 s galGal6.chrUn_NW_020109905v1 213 18 + 2898 GAAACCGCAGTCAGGCac s cotJap2.chr2 39347743 18 - 134823679 gacagtgctctcagacac i cotJap2.chr2 C 0 I 1 s fulGla1.KK610899 38253 18 - 40935 GAAGCCCTAGTCGAGCCT i fulGla1.KK610899 I 13 I 40 s picPub1.KL216911 396571 18 + 1622813 gatggtgccttgagcaat i picPub1.KL216911 C 0 I 1 s pelSin1.JH207533 1158828 18 - 1270565 GTTCTCCCGGCCAGGTGC i pelSin1.JH207533 C 0 C 0 e lepDis1.KK669342 12786 102 - 13883 I a score=-1257.000000 s galGal6.chrUn_NW_020109905v1 231 12 + 2898 -agggtttgattt s cotJap2.chr2 39347762 12 - 134823679 -AGAGTCTGATTT i cotJap2.chr2 I 1 C 0 s picPub1.KL216911 396590 11 + 1622813 -tgggctagagg- i picPub1.KL216911 I 1 I 1 s pelSin1.JH207533 1158846 12 - 1270565 AATGATCAAGTT- i pelSin1.JH207533 C 0 C 0 e fulGla1.KK610899 38271 40 - 40935 I e lepDis1.KK669342 12786 102 - 13883 I a score=-951.000000 s galGal6.chrUn_NW_020109905v1 243 1 + 2898 -t s chlUnd1.KK746311 70530 1 + 135506 -C i chlUnd1.KK746311 N 0 I 4 s pelSin1.JH207533 1158858 1 - 1270565 G- i pelSin1.JH207533 C 0 C 0 e cotJap2.chr2 39347774 0 - 134823679 C e fulGla1.KK610899 38271 40 - 40935 I e lepDis1.KK669342 12786 102 - 13883 I e picPub1.KL216911 396601 1 + 1622813 I a score=807.000000 s galGal6.chrUn_NW_020109905v1 244 2 + 2898 gg s cotJap2.chr2 39347774 2 - 134823679 GG i cotJap2.chr2 C 0 C 0 s picPub1.KL216911 396602 2 + 1622813 ag i picPub1.KL216911 I 1 C 0 s pelSin1.JH207533 1158859 2 - 1270565 GG i pelSin1.JH207533 C 0 C 0 e chlUnd1.KK746311 70531 4 + 135506 I e fulGla1.KK610899 38271 40 - 40935 I e lepDis1.KK669342 12786 102 - 13883 I a score=1000.000000 s galGal6.chrUn_NW_020109905v1 246 1 + 2898 g s cotJap2.chr2 39347776 1 - 134823679 G i cotJap2.chr2 C 0 C 0 s lepDis1.KK669342 12888 1 - 13883 g i lepDis1.KK669342 I 102 I 220 s picPub1.KL216911 396604 1 + 1622813 g i picPub1.KL216911 C 0 C 0 s pelSin1.JH207533 1158861 1 - 1270565 G i pelSin1.JH207533 C 0 C 0 e chlUnd1.KK746311 70531 4 + 135506 I e fulGla1.KK610899 38271 40 - 40935 I a score=546.000000 s galGal6.chrUn_NW_020109905v1 247 1 + 2898 t s cotJap2.chr2 39347777 1 - 134823679 T i cotJap2.chr2 C 0 C 0 s picPub1.KL216911 396605 1 + 1622813 t i picPub1.KL216911 C 0 C 0 s pelSin1.JH207533 1158862 1 - 1270565 t i pelSin1.JH207533 C 0 C 0 e chlUnd1.KK746311 70531 4 + 135506 I e fulGla1.KK610899 38271 40 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=-1543.000000 s galGal6.chrUn_NW_020109905v1 248 6 + 2898 -ggtcct--- s cotJap2.chr2 39347778 6 - 134823679 -AGTCCT--- i cotJap2.chr2 C 0 C 0 s chlUnd1.KK746311 70535 5 + 135506 --GCACT--- i chlUnd1.KK746311 I 4 I 1 s picPub1.KL216911 396606 5 + 1622813 --gtccc--- i picPub1.KL216911 C 0 I 1 s pelSin1.JH207533 1158863 10 - 1270565 tgggcctgct i pelSin1.JH207533 C 0 C 0 e fulGla1.KK610899 38271 40 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=698.000000 s galGal6.chrUn_NW_020109905v1 254 3 + 2898 ttg s cotJap2.chr2 39347784 3 - 134823679 GTG i cotJap2.chr2 C 0 I 1 s fulGla1.KK610899 38311 3 - 40935 CTG i fulGla1.KK610899 I 40 C 0 s chlUnd1.KK746311 70541 3 + 135506 TTC i chlUnd1.KK746311 I 1 N 0 s picPub1.KL216911 396612 1 + 1622813 --g i picPub1.KL216911 I 1 I 2 s pelSin1.JH207533 1158873 3 - 1270565 ttg i pelSin1.JH207533 C 0 C 0 e lepDis1.KK669342 12889 220 - 13883 I a score=2828.000000 s galGal6.chrUn_NW_020109905v1 257 12 + 2898 gggagccagggg s cotJap2.chr2 39347788 12 - 134823679 TGGATCCAGGAG i cotJap2.chr2 I 1 C 0 s fulGla1.KK610899 38314 12 - 40935 GTGGGACAGGGC i fulGla1.KK610899 C 0 C 0 s picPub1.KL216911 396615 12 + 1622813 tgtgcccagggg i picPub1.KL216911 I 2 C 0 s pelSin1.JH207533 1158876 8 - 1270565 ----ggcagggg i pelSin1.JH207533 C 0 C 0 e lepDis1.KK669342 12889 220 - 13883 I a score=-664.000000 s galGal6.chrUn_NW_020109905v1 269 2 + 2898 tt s cotJap2.chr2 39347800 2 - 134823679 TT i cotJap2.chr2 C 0 C 0 s fulGla1.KK610899 38326 2 - 40935 TG i fulGla1.KK610899 C 0 I 130 s picPub1.KL216911 396627 2 + 1622813 gc i picPub1.KL216911 C 0 I 2 s pelSin1.JH207533 1158884 2 - 1270565 gc i pelSin1.JH207533 C 0 I 1 s anoCar2.chr1 133162919 2 - 263920458 TC i anoCar2.chr1 N 0 C 0 e lepDis1.KK669342 12889 220 - 13883 I a score=-1217.000000 s galGal6.chrUn_NW_020109905v1 271 53 + 2898 gg--acttgatggtccctgtgtgtcccttccaactcag-gatatt-ctatgattctg s cotJap2.chr2 39347802 56 - 134823679 GAGTACTTAGATATCT-TATTTGTGGTCTCCAACTGAGAGATatttctatggttcta i cotJap2.chr2 C 0 C 0 s picPub1.KL216911 396631 52 + 1622813 ga--actggaggatct-ttcaggtcccttccaacctaa-actgtt-ctatgactctg i picPub1.KL216911 I 2 I 14 s pelSin1.JH207533 1158887 51 - 1270565 gg--gcttgatgcctc-ctgagatctcttccagcccta-ga-atg-cTGGGATTCTA i pelSin1.JH207533 I 1 C 0 s anoCar2.chr1 133162921 49 - 263920458 GG--CTTTTCTCCTCCTTCAGTGTCGCTTCAAGT-----AATATC-AGCTGAGACTA i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38328 130 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=-1767.000000 s galGal6.chrUn_NW_020109905v1 324 12 + 2898 tgatatccGTGG s cotJap2.chr2 39347858 12 - 134823679 tgacacTAAAAG i cotJap2.chr2 C 0 N 0 s pelSin1.JH207533 1158938 10 - 1270565 GGGTACAAGA-- i pelSin1.JH207533 C 0 C 0 s anoCar2.chr1 133162970 10 - 263920458 CCATACGAGT-- i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38328 130 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I e picPub1.KL216911 396683 14 + 1622813 I a score=-1684.000000 s galGal6.chrUn_NW_020109905v1 336 12 + 2898 TTTGCCTGGGAA-- s pelSin1.JH207533 1158948 12 - 1270565 ACTCAAGACTAT-- i pelSin1.JH207533 C 0 I 1 s anoCar2.chr1 133162980 14 - 263920458 TCTGCCCAGGAGCA i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38328 130 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I e picPub1.KL216911 396683 14 + 1622813 I a score=-137.000000 s galGal6.chrUn_NW_020109905v1 348 1 + 2898 A s picPub1.KL216911 396697 1 + 1622813 C i picPub1.KL216911 I 14 N 0 s anoCar2.chr1 133162994 1 - 263920458 A i anoCar2.chr1 C 0 C 0 e pelSin1.JH207533 1158960 1 - 1270565 I e fulGla1.KK610899 38328 130 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=77.000000 s galGal6.chrUn_NW_020109905v1 349 29 + 2898 TCCCTGatggtttt--ttctttccctttttc s pelSin1.JH207533 1158961 28 - 1270565 TCCGTGCCTGCTTT--TTCCT-CCTAGCCCC i pelSin1.JH207533 I 1 C 0 s anoCar2.chr1 133162995 28 - 263920458 ---TTGCCAGCTGTACCTCCTTCCTGTTGTT i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38328 130 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=-265.000000 s galGal6.chrUn_NW_020109905v1 378 1 + 2898 a s phaCar1.KL422674 38791 1 + 77101 C i phaCar1.KL422674 N 0 C 0 s capCar1.KL340075 35495 1 + 60063 C i capCar1.KL340075 N 0 C 0 s pelSin1.JH207533 1158989 1 - 1270565 A i pelSin1.JH207533 C 0 C 0 e anoCar2.chr1 133163023 0 - 263920458 C e fulGla1.KK610899 38328 130 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=681.000000 s galGal6.chrUn_NW_020109905v1 379 1 + 2898 t s melGal5.chr15 2187382 1 + 17450715 G i melGal5.chr15 N 0 C 0 s tauEry1.KL455809 9764 1 + 35130 T i tauEry1.KL455809 N 0 N 0 s phaCar1.KL422674 38792 1 + 77101 T i phaCar1.KL422674 C 0 N 0 s capCar1.KL340075 35496 1 + 60063 T i capCar1.KL340075 C 0 C 0 s pelSin1.JH207533 1158990 1 - 1270565 T i pelSin1.JH207533 C 0 C 0 s anoCar2.chr1 133163023 1 - 263920458 T i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38328 130 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=-3304.000000 s galGal6.chrUn_NW_020109905v1 380 3 + 2898 -gGC s melGal5.chr15 2187383 3 + 17450715 -GAG i melGal5.chr15 C 0 N 0 s capCar1.KL340075 35497 3 + 60063 -GAG i capCar1.KL340075 C 0 C 0 s pelSin1.JH207533 1158991 1 - 1270565 ---C i pelSin1.JH207533 C 0 I 2 s anoCar2.chr1 133163024 3 - 263920458 TGC- i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38328 130 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=180.000000 s galGal6.chrUn_NW_020109905v1 383 1 + 2898 T s capCar1.KL340075 35500 1 + 60063 T i capCar1.KL340075 C 0 N 0 s pelSin1.JH207533 1158994 1 - 1270565 C i pelSin1.JH207533 I 2 C 0 s anoCar2.chr1 133163027 1 - 263920458 T i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38328 130 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=-829.000000 s galGal6.chrUn_NW_020109905v1 384 1 + 2898 -A s pelSin1.JH207533 1158995 1 - 1270565 -A i pelSin1.JH207533 C 0 C 0 s anoCar2.chr1 133163028 1 - 263920458 T- i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38328 130 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=-1103.000000 s galGal6.chrUn_NW_020109905v1 385 2 + 2898 GC- s fulGla1.KK610899 38458 2 - 40935 GT- i fulGla1.KK610899 I 130 C 0 s pelSin1.JH207533 1158996 1 - 1270565 -C- i pelSin1.JH207533 C 0 N 0 s anoCar2.chr1 133163029 2 - 263920458 -CT i anoCar2.chr1 C 0 C 0 e lepDis1.KK669342 12889 220 - 13883 I a score=1741.000000 s galGal6.chrUn_NW_020109905v1 387 11 + 2898 GAGCTGTGAGA s fulGla1.KK610899 38460 11 - 40935 Gagctgtgaaa i fulGla1.KK610899 C 0 I 23 s anoCar2.chr1 133163031 11 - 263920458 GTGCTGTGATT i anoCar2.chr1 C 0 C 0 e lepDis1.KK669342 12889 220 - 13883 I a score=-228.000000 s galGal6.chrUn_NW_020109905v1 398 27 + 2898 AGT--GAAGGAATGGCAGTGCGT----GCTTAA s anoCar2.chr1 133163042 33 - 263920458 CGCAAGGAGGAACTGAATTCTGCTTCCACTTAA i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38471 23 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=-1421.000000 s galGal6.chrUn_NW_020109905v1 425 4 + 2898 CCGG- s fulGla1.KK610899 38494 4 - 40935 TAAG- i fulGla1.KK610899 I 23 I 185 s phaLep1.KK448075 53024 4 - 118683 ACAG- i phaLep1.KK448075 N 0 C 0 s anoCar2.chr1 133163075 4 - 263920458 -CTGT i anoCar2.chr1 C 0 C 0 e lepDis1.KK669342 12889 220 - 13883 I a score=-380.000000 s galGal6.chrUn_NW_020109905v1 429 2 + 2898 -GC-- s phaLep1.KK448075 53028 2 - 118683 -GC-- i phaLep1.KK448075 C 0 N 0 s anoCar2.chr1 133163079 5 - 263920458 GGCAC i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38498 185 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=-116.000000 s galGal6.chrUn_NW_020109905v1 431 19 + 2898 TGCGTGG------CAAGCAGGTCCG s anoCar2.chr1 133163084 25 - 263920458 TTCATGGTGTGCCCAGTCATATTGG i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38498 185 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=-1034.000000 s galGal6.chrUn_NW_020109905v1 450 1 + 2898 -C s apaSpi1.APJP01331784 97 1 + 347 -A i apaSpi1.APJP01331784 N 0 N 0 s anoCar2.chr1 133163109 1 - 263920458 T- i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38498 185 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=77.000000 s galGal6.chrUn_NW_020109905v1 451 3 + 2898 TGG s anoCar2.chr1 133163110 3 - 263920458 AGG i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38498 185 - 40935 I e lepDis1.KK669342 12889 220 - 13883 I a score=300.000000 s galGal6.chrUn_NW_020109905v1 454 1 + 2898 G s lepDis1.KK669342 13109 1 - 13883 G i lepDis1.KK669342 I 220 I 209 s anoCar2.chr1 133163113 1 - 263920458 G i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38498 185 - 40935 I a score=111.000000 s galGal6.chrUn_NW_020109905v1 455 14 + 2898 CTGCC-GTATAAGGA s anoCar2.chr1 133163114 15 - 263920458 CTGCCTGCCCAGGCA i anoCar2.chr1 C 0 C 0 e fulGla1.KK610899 38498 185 - 40935 I e lepDis1.KK669342 13110 209 - 13883 I a score=819.000000 s galGal6.chrUn_NW_020109905v1 469 41 + 2898 TGCATCCAGACTTCCAAATC-ACCTCCTTTAAGAAGGCCGAA s anoCar2.chr1 133163129 42 - 263920458 TACCTTGATACATGCAATTCTACTCTTTTTGAGGCTGCCAAA i anoCar2.chr1 C 0 I 2 s mm10.chr11 32834784 40 + 122082543 TGTACTTCAACATCCAGGG--GCTCTTTTGTAACAAGCCAAA i mm10.chr11 N 0 C 0 e fulGla1.KK610899 38498 185 - 40935 I e lepDis1.KK669342 13110 209 - 13883 I a score=-586.000000 s galGal6.chrUn_NW_020109905v1 510 39 + 2898 TAGTCTTTCA----------------------------------GTGATTGTTCTGGG--CAGCTCAC----ACCACTG s phoRub1.KK418723 8566 41 + 37146 TGGCCTTTCA----------------------------------GCAGTAGTCCTGCTTCCAAGCTTC----ACTACTG i phoRub1.KK418723 N 0 I 1039 s anoCar2.chr1 133163173 73 - 263920458 TGTTCTCTCACTCACTCtcaccctgtgtgtgtgtgtgtgtgtgtgttattgttCTGGG--CAGCACAT----GCCACTG i anoCar2.chr1 I 2 C 0 s mm10.chr11 32834824 41 + 122082543 TATCCCTGTG------------------------------------TATTGTTCTAGG--CACCTCCCGTTGGTCATTG i mm10.chr11 C 0 C 0 e fulGla1.KK610899 38498 185 - 40935 I e lepDis1.KK669342 13110 209 - 13883 I a score=4543.000000 s galGal6.chrUn_NW_020109905v1 549 44 + 2898 G-GTGTATAATTCATTTCACTTGGAATTTCAGGGTCAGACATAAA s anoCar2.chr1 133163246 45 - 263920458 GCATGGGCAATGCCTTGCGATTAAAATTACAAGATCAGACATAAA i anoCar2.chr1 C 0 C 0 s mm10.chr11 32834865 41 + 122082543 ----GGCTAATTTATTTCAGTCGGAATTTCAGGACCAGACACAAC i mm10.chr11 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I e fulGla1.KK610899 38498 185 - 40935 I e lepDis1.KK669342 13110 209 - 13883 I a score=-1839.000000 s galGal6.chrUn_NW_020109905v1 593 3 + 2898 -------------TGT-- s fulGla1.KK610899 38683 3 - 40935 -------------TGT-- i fulGla1.KK610899 I 185 I 42 s anoCar2.chr1 133163291 3 - 263920458 -------------GGT-- i anoCar2.chr1 C 0 C 0 s mm10.chr11 32834906 18 + 122082543 TCTTATTACTCACTGCTT i mm10.chr11 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I e lepDis1.KK669342 13110 209 - 13883 I a score=300.000000 s galGal6.chrUn_NW_020109905v1 596 1 + 2898 C s anoCar2.chr1 133163294 1 - 263920458 C i anoCar2.chr1 C 0 I 27 s mm10.chr11 32834924 1 + 122082543 C i mm10.chr11 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I e fulGla1.KK610899 38686 42 - 40935 I e lepDis1.KK669342 13110 209 - 13883 I a score=287.000000 s galGal6.chrUn_NW_020109905v1 597 2 + 2898 TG s lepDis1.KK669342 13319 2 - 13883 gg i lepDis1.KK669342 I 209 N 0 s anoCar2.chr1 133163322 2 - 263920458 gg i anoCar2.chr1 I 27 I 2 s mm10.chr11 32834925 2 + 122082543 AG i mm10.chr11 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I e fulGla1.KK610899 38686 42 - 40935 I a score=-2337.000000 s galGal6.chrUn_NW_020109905v1 599 12 + 2898 AGAAGGAAGTG-------------------------------------------------G s anoCar2.chr1 133163326 61 - 263920458 agaaagaaatacagagagagggagggagcggtgggtgggtatggagagatgaagagaaGTG i anoCar2.chr1 I 2 C 0 s mm10.chr11 32834927 12 + 122082543 AGAGGGAATAA-------------------------------------------------A i mm10.chr11 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I e fulGla1.KK610899 38686 42 - 40935 I a score=207.000000 s galGal6.chrUn_NW_020109905v1 611 1 + 2898 G s fulGla1.KK610899 38728 1 - 40935 g i fulGla1.KK610899 I 42 I 59 s anoCar2.chr1 133163387 1 - 263920458 G i anoCar2.chr1 C 0 C 0 s mm10.chr11 32834939 1 + 122082543 A i mm10.chr11 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=4239.000000 s galGal6.chrUn_NW_020109905v1 612 52 + 2898 AGGCTGAactgatatttggaaaaatgaaaaat--gtttaaaatgttttt------------------gcaag- s anoCar2.chr1 133163388 72 - 263920458 AAGCCGAATTCATATTTGGAAAATGGGAAAATATGTTTAGAATGTTTTGTTGGGGAGTGgggaagaggaaaa- i anoCar2.chr1 C 0 C 0 s mm10.chr11 32834940 62 + 122082543 AAGC--AATTGATATTTGGAAAAATGAAAAATATGTCCAGAACACTTTG---------GGTCCCGAGGCCAAG i mm10.chr11 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I e fulGla1.KK610899 38729 59 - 40935 I a score=-2586.000000 s galGal6.chrUn_NW_020109905v1 664 4 + 2898 ----ATAA------------------------- s fulGla1.KK610899 38788 4 - 40935 ----aaaa------------------------- i fulGla1.KK610899 I 59 N 0 s anoCar2.chr1 133163460 4 - 263920458 ----acaa------------------------- i anoCar2.chr1 C 0 I 3 s mm10.chr11 32835002 33 + 122082543 AAGGAAAAGGAGGGTGGGTGGGTGGAGGGGAAA i mm10.chr11 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=1766.000000 s galGal6.chrUn_NW_020109905v1 668 44 + 2898 GCCCTCAGCAAACA-----------------GTCG-TCCTGTTGCACTTTTGGCCAGTCTCA s pteGut1.KL231475 1046 44 + 88758 GCCCTCAGTGAATA-----------------GTCA-TTCCACTCAGCTTCTGGCCAGTCTCG i pteGut1.KL231475 N 0 N 0 s anoCar2.chr1 133163467 45 - 263920458 tCCCTGGCCAAATA-----------------GTTTCTTCCATTCTGTTGCTGGCAAGCCTCA i anoCar2.chr1 I 3 C 0 s mm10.chr11 32835035 59 + 122082543 GCTGGCGGGAAAAATCAGGCAGGCTCACCTCGTCA--CACACTCTGTCG-TGCCCTGTCTCG i mm10.chr11 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=5548.000000 s galGal6.chrUn_NW_020109905v1 712 60 + 2898 GATGCTTGTCTTCCAGAATGTCTGCGTGTGGATGAATC-GCAACAGGATCCTGggaatttt s anoCar2.chr1 133163512 60 - 263920458 GAGGGTTCTCTTCCAGAATGTCTGCAACCGAATGAATC-ACACCATGCTCTTGGGATCTCT i anoCar2.chr1 C 0 C 0 s mm10.chr11 32835094 61 + 122082543 GAGACAGAGAGTCTAGAATGTCTACAGACAAATGAATCAATAGCAGGGTGCTGAGACTTCC i mm10.chr11 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=180.000000 s galGal6.chrUn_NW_020109905v1 772 1 + 2898 t s cheMyd1.KB515585 864537 1 + 3324539 C i cheMyd1.KB515585 N 0 C 0 s anoCar2.chr1 133163572 1 - 263920458 T i anoCar2.chr1 C 0 N 0 s mm10.chr11 32835155 1 + 122082543 T i mm10.chr11 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=302.000000 s galGal6.chrUn_NW_020109905v1 773 2 + 2898 aa s cheMyd1.KB515585 864538 2 + 3324539 AA i cheMyd1.KB515585 C 0 C 0 s mm10.chr11 32835156 2 + 122082543 GA i mm10.chr11 C 0 N 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-921.000000 s galGal6.chrUn_NW_020109905v1 775 89 + 2898 gaaag----------------gtaggaaggaggacccggggaactacaggccggtgagcctcacctctgtgcctgggaagatcatggagcagatcctcctacaag s cheMyd1.KB515585 864540 76 + 3324539 AAGAGAATATAGGAAGTGATTGTTGGGAAGATGCCCCAGATATCTATA------------------TTATCTTTTAGGAGATTATATAGTTAAT----------- i cheMyd1.KB515585 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=150.000000 s galGal6.chrUn_NW_020109905v1 864 10 + 2898 aggaagaaac-- s cotJap2.chrUn_NW_015440052v1 37921 10 + 77997 agaaaaaaac-- i cotJap2.chrUn_NW_015440052v1 N 0 N 0 s cheMyd1.KB515585 864616 6 + 3324539 ------AAACAT i cheMyd1.KB515585 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=1339.000000 s galGal6.chrUn_NW_020109905v1 874 12 + 2898 ttacaggagaaa s cotJap2.chr3 93672334 12 - 100941466 ttacaggaggaa i cotJap2.chr3 N 0 C 0 s araMac1.AOUJ01496192 485 11 + 776 ttttagcagGA- i araMac1.AOUJ01496192 N 0 N 0 s cheMyd1.KB515585 864622 12 + 3324539 CTTTGGCAGAGA i cheMyd1.KB515585 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=11406.000000 s galGal6.chrUn_NW_020109905v1 886 282 + 2898 aaaactaCAGGT-GAGCCTAACCTATCAATTAACTGAGA---------------ACAAAACGTTAGGAAGGACAAGACTGTGCTTGAGTTTTCCCAGTAATTAGTGCCTGAATTCCAGAGTGGGTTTCTGAATCTTTGTTTCATCCTACGGGTCCTATGAAGGACTGTGCCTTCATTGTAATCTGCATCAGAAATGCCTCCTTTCTCAGGGCAAATCCAGCCA--TTGGATTAAGGGCAAAAATAATGTGCAGAGTAGGACTTCTATAGT----ACTCATATTATACA-----ACTCTAAAGACAGACT s cotJap2.chr3 93672346 239 - 100941466 aaaacc-caaca-aaacgGAGCCTAACAGATTAATGAGA---------------CCAAAATGTTAGGAAAG-------TGTGCTTGAGTTTTCCCAGTAATTAGTGCCCGAATTCCAGAATGGGTTTCTGAACCTTTCTTTCATCCTGCAGGTCCTATGAAGGACTGTGCCTGCATTGTAATCTCCATCAGAAATGCCTCCTTTCTCAGTGAAAATCCAGCCA--TTGGATTAAGGGCAAAAATGATGTGCAGAGTAGAAGCTGT-------------------------------------------- i cotJap2.chr3 C 0 C 0 s cheMyd1.KB515585 864634 268 + 3324539 -AAATT-TAGCACCAGTGTCTTCTGACACATCAGTgatataaaaaatgaaattgcCATAATAGTAGGAAGGACATGGCATTCCTTCAGTTTTCTCTCTGAATAGTTCTTTATCTCCAGGAATTATTTGTGTATC---------------------------------AGCATTTATGGTAAAACCCACCTAAAAGccatttttgctt--tgaaaatctccccaccTTGCTTTAAGCACATAAGT----TTGAAATTTTGGCTTGTATCATTGTAATCCATCTTTGGCAGTGATGTCCTAGACTCAGACT i cheMyd1.KB515585 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-108.000000 s galGal6.chrUn_NW_020109905v1 1168 2 + 2898 AT s cheMyd1.KB515585 864902 2 + 3324539 GG i cheMyd1.KB515585 C 0 N 0 s xenLae2.chr4S 34790885 2 - 121245977 at i xenLae2.chr4S N 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I e cotJap2.chr3 93672585 0 - 100941466 C a score=5893.000000 s galGal6.chrUn_NW_020109905v1 1170 148 + 2898 AATACTCTATATTACAGGGACTCTAAAAACAGACTGCTTCAACACACTTGAAATCAGCACACCTTTGAATC---TGATGCAAAGAGATGCAcgtttggttgttttgttttgtt-tgtttttaaatctctttgaaCAGCCAGATCAAGTAGCT s cotJap2.chr3 93672585 134 - 100941466 ---------TCTTCC-----CTCTGAATACAGTCTGCTTCAACACCCTTGCATTCAGAATCCCTTTAAAGC---TGATGCAAAGAGAAGcatgtttggttgttttgtgttgtt-ttgttttaaatagctttGAACAGCCAGATCCAGTAGCT i cotJap2.chr3 C 0 C 0 s xenLae2.chr4S 34790887 128 - 121245977 aatattgtatatagatgggaccacaaaa-----------caacaatgtaaaattaggaaaattttaaaatcaggggatgtaaaa-----------tgggggttctacggTATTATGTTTCTAGGTTATTATGTAAATAAAGAT--AACATCT i xenLae2.chr4S C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=132.000000 s galGal6.chrUn_NW_020109905v1 1318 2 + 2898 GA s cotJap2.chr3 93672719 2 - 100941466 AA i cotJap2.chr3 C 0 C 0 s fulGla1.KK606249 18847 2 - 24915 TA i fulGla1.KK606249 N 0 N 0 s xenLae2.chr4S 34791015 2 - 121245977 TA i xenLae2.chr4S C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-878.000000 s galGal6.chrUn_NW_020109905v1 1320 3 + 2898 ---GAA s cotJap2.chr3 93672721 3 - 100941466 ---GAA i cotJap2.chr3 C 0 C 0 s xenLae2.chr4S 34791017 3 - 121245977 CCT--- i xenLae2.chr4S C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=1187.000000 s galGal6.chrUn_NW_020109905v1 1323 37 + 2898 GCCTCgtt--ccagcttttctgtaaaaCTTGA--------------------GTCATGA s cotJap2.chr3 93672724 37 - 100941466 GCCTCGtt--ccagcttttctgtacaAATGGA--------------------GTCATGG i cotJap2.chr3 C 0 C 0 s mm10.chr1 43995473 39 - 195471971 GTCTTGTTTATCAGATTTTCAAGGAGAGTTTA--------------------GTTAACC i mm10.chr1 N 0 C 0 s xenLae2.chr4S 34791020 57 - 121245977 GTCTCCTG--ACATCATTTTTGTAACAGTCTGTTCCACTTGGCTTCATTAGCATCAATG i xenLae2.chr4S C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-4242.000000 s galGal6.chrUn_NW_020109905v1 1360 36 + 2898 GGAGTGC-TTTCTCTAACAGTGGTAGTG-----TTGGGA--CAC s cotJap2.chr3 93672761 36 - 100941466 TGAGTGT-TTTCTCTAACAATTGTAGCG-----TTGGGA--CAC i cotJap2.chr3 C 0 C 0 s mm10.chr1 43995512 44 - 195471971 GGTTTACATTTTTGTGATAGTAAAAATAACTATTTAGAAATTAG i mm10.chr1 C 0 C 0 s xenLae2.chr4S 34791077 42 - 121245977 GATATATATGtccctgtgtgtgttattgtgaaagtaaaa--tat i xenLae2.chr4S C 0 C 0 s angJap1.KI307563 7416 27 - 56816 GAAGTGT---TCTCTCACTGT------------TTGAAC--TGT i angJap1.KI307563 N 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-1197.000000 s galGal6.chrUn_NW_020109905v1 1396 7 + 2898 ACGCCTC s cotJap2.chr3 93672797 7 - 100941466 ACGCTTC i cotJap2.chr3 C 0 C 0 s mm10.chr1 43995556 7 - 195471971 ATATTTT i mm10.chr1 C 0 C 0 s xenLae2.chr4S 34791119 5 - 121245977 atatg-- i xenLae2.chr4S C 0 C 0 s angJap1.KI307563 7443 7 - 56816 TCACTCA i angJap1.KI307563 C 0 I 4 s letCam1.KE994637 91027 7 - 118437 ACACCCC i letCam1.KE994637 N 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-17.000000 s galGal6.chrUn_NW_020109905v1 1403 5 + 2898 TCTTT- s cotJap2.chr3 93672804 5 - 100941466 TGTTT- i cotJap2.chr3 C 0 C 0 s hg38.chr1 185093003 3 + 248956422 --TCT- i hg38.chr1 N 0 I 1 s mm10.chr1 43995563 5 - 195471971 TGTTT- i mm10.chr1 C 0 I 1 s xenLae2.chr4S 34791124 5 - 121245977 ttttt- i xenLae2.chr4S C 0 C 0 s angJap1.KI307563 7454 5 - 56816 TGCCT- i angJap1.KI307563 I 4 C 0 s letCam1.KE994637 91034 5 - 118437 -ACTTC i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-7022.000000 s galGal6.chrUn_NW_020109905v1 1408 9 + 2898 TTGCCACAG-------- s cotJap2.chr3 93672809 9 - 100941466 TTGCCATCA-------- i cotJap2.chr3 C 0 C 0 s anoCar2.chrUn_GL343203 1483593 9 - 4717188 TGGCTTTGG-------- i anoCar2.chrUn_GL343203 N 0 C 0 s hg38.chr1 185093007 9 + 248956422 TAGCCCAAA-------- i hg38.chr1 I 1 C 0 s mm10.chr1 43995569 9 - 195471971 TAGCACAAC-------- i mm10.chr1 I 1 C 0 s xenLae2.chr4S 34791129 4 - 121245977 -----taaa-------- i xenLae2.chr4S C 0 C 0 s angJap1.KI307563 7459 8 - 56816 -TGCCCAGC-------- i angJap1.KI307563 C 0 I 2 s letCam1.KE994637 91039 17 - 118437 CTGCCACTTCTTATCAC i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-2224.000000 s galGal6.chrUn_NW_020109905v1 1417 3 + 2898 ACT-- s cotJap2.chr3 93672818 3 - 100941466 ACT-- i cotJap2.chr3 C 0 C 0 s anoCar2.chrUn_GL343203 1483602 3 - 4717188 AAT-- i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093016 3 + 248956422 GAT-- i hg38.chr1 C 0 I 3 s mm10.chr1 43995578 3 - 195471971 AGT-- i mm10.chr1 C 0 I 3 s xenLae2.chr4S 34791133 3 - 121245977 act-- i xenLae2.chr4S C 0 C 0 s nanPar1.KN905951v1 787403 3 - 2428735 ATC-- i nanPar1.KN905951v1 N 0 C 0 s angJap1.KI307563 7469 1 - 56816 --T-- i angJap1.KI307563 I 2 I 2 s letCam1.KE994637 91056 3 - 118437 --TCT i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=802.000000 s galGal6.chrUn_NW_020109905v1 1420 2 + 2898 GA s cotJap2.chr3 93672821 2 - 100941466 GA i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 123875 2 + 179485 GA i pytBiv1.KE955523 N 0 C 0 s anoCar2.chrUn_GL343203 1483605 2 - 4717188 TA i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093022 1 + 248956422 -A i hg38.chr1 I 3 C 0 s mm10.chr1 43995584 1 - 195471971 -G i mm10.chr1 I 3 C 0 s xenLae2.chr4S 34791136 2 - 121245977 tg i xenLae2.chr4S C 0 C 0 s nanPar1.KN905951v1 787406 2 - 2428735 AA i nanPar1.KN905951v1 C 0 C 0 s angJap1.KI307563 7472 2 - 56816 GA i angJap1.KI307563 I 2 C 0 s letCam1.KE994637 91059 2 - 118437 AA i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-2716.000000 s galGal6.chrUn_NW_020109905v1 1422 2 + 2898 GC- s cotJap2.chr3 93672823 2 - 100941466 AT- i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 123877 2 + 179485 gc- i pytBiv1.KE955523 C 0 C 0 s anoCar2.chrUn_GL343203 1483607 2 - 4717188 AC- i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093023 2 + 248956422 GC- i hg38.chr1 C 0 C 0 s mm10.chr1 43995585 2 - 195471971 TC- i mm10.chr1 C 0 C 0 s xenTro9.chr4 29662722 2 - 133473341 GT- i xenTro9.chr4 N 0 C 0 s nanPar1.KN905951v1 787408 2 - 2428735 AT- i nanPar1.KN905951v1 C 0 C 0 s angJap1.KI307563 7474 2 - 56816 AC- i angJap1.KI307563 C 0 I 2 s letCam1.KE994637 91061 2 - 118437 -CC i letCam1.KE994637 C 0 C 0 e xenLae2.chr4S 34791138 0 - 121245977 C e phoRub1.KK418723 8607 1039 + 37146 I a score=3785.000000 s galGal6.chrUn_NW_020109905v1 1424 1 + 2898 A s cotJap2.chr3 93672825 1 - 100941466 A i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 123879 1 + 179485 a i pytBiv1.KE955523 C 0 I 3 s anoCar2.chrUn_GL343203 1483609 1 - 4717188 A i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093025 1 + 248956422 A i hg38.chr1 C 0 I 2 s mm10.chr1 43995587 1 - 195471971 A i mm10.chr1 C 0 I 1 s xenTro9.chr4 29662724 1 - 133473341 A i xenTro9.chr4 C 0 C 0 s nanPar1.KN905951v1 787410 1 - 2428735 A i nanPar1.KN905951v1 C 0 C 0 s angJap1.KI307563 7478 1 - 56816 A i angJap1.KI307563 I 2 C 0 s danRer11.chr2 23357420 1 + 59640629 A i danRer11.chr2 N 0 C 0 s letCam1.KE994637 91063 1 - 118437 G i letCam1.KE994637 C 0 C 0 e xenLae2.chr4S 34791138 0 - 121245977 C e phoRub1.KK418723 8607 1039 + 37146 I a score=-9320.000000 s galGal6.chrUn_NW_020109905v1 1425 10 + 2898 ttgttctctc s cotJap2.chr3 93672826 10 - 100941466 TTGTTCTCTC i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 123883 10 + 179485 ttttggattt i pytBiv1.KE955523 I 3 C 0 s thaSir1.NW_013658955v1 15689 10 + 356375 tcgtaattct i thaSir1.NW_013658955v1 N 0 C 0 s anoCar2.chrUn_GL343203 1483610 1 - 4717188 ---------T i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093028 10 + 248956422 GTTTACATTT i hg38.chr1 I 2 C 0 s mm10.chr1 43995589 10 - 195471971 GTCTAAATTT i mm10.chr1 I 1 C 0 s xenTro9.chr4 29662725 5 - 133473341 -----GTGTT i xenTro9.chr4 C 0 C 0 s xenLae2.chr4S 34791138 5 - 121245977 -----gcgtt i xenLae2.chr4S C 0 C 0 s nanPar1.KN905951v1 787411 5 - 2428735 -----CTGTC i nanPar1.KN905951v1 C 0 C 0 s angJap1.KI307563 7479 10 - 56816 TGATTTACTC i angJap1.KI307563 C 0 C 0 s danRer11.chr2 23357421 10 + 59640629 TTGTCATATC i danRer11.chr2 C 0 C 0 s letCam1.KE994637 91064 10 - 118437 GTGTTCCATT i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-20261.000000 s galGal6.chrUn_NW_020109905v1 1435 9 + 2898 tcct-----tcttc s cotJap2.chr3 93672836 9 - 100941466 TCCT-----TATTA i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 123893 9 + 179485 tttt-----ttctt i pytBiv1.KE955523 C 0 C 0 s thaSir1.NW_013658955v1 15699 9 + 356375 tttt-----ttttt i thaSir1.NW_013658955v1 C 0 C 0 s anoCar2.chrUn_GL343203 1483611 9 - 4717188 TCTC-----CTTTC i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093038 14 + 248956422 GCTTTCCCCTCCTT i hg38.chr1 C 0 C 0 s mm10.chr1 43995599 9 - 195471971 TCTT-----CTCTT i mm10.chr1 C 0 C 0 s xenTro9.chr4 29662730 11 - 133473341 CCATTA---TTTTT i xenTro9.chr4 C 0 C 0 s xenLae2.chr4S 34791143 9 - 121245977 --aata---ttttt i xenLae2.chr4S C 0 C 0 s nanPar1.KN905951v1 787416 9 - 2428735 CCAT-----CTGTT i nanPar1.KN905951v1 C 0 C 0 s gasAcu1.chrIII 11632652 2 - 16798506 ------------TC i gasAcu1.chrIII N 0 I 7 s angJap1.KI307563 7489 2 - 56816 ------------TC i angJap1.KI307563 C 0 I 1 s danRer11.chr2 23357431 2 + 59640629 ------------TC i danRer11.chr2 C 0 I 6 s letCam1.KE994637 91074 9 - 118437 CCTT-----TATTT i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-20318.000000 s galGal6.chrUn_NW_020109905v1 1444 6 + 2898 -----atATCT------ s cotJap2.chr3 93672845 6 - 100941466 -----ATATCT------ i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 123902 6 + 179485 -----attctc------ i pytBiv1.KE955523 C 0 C 0 s thaSir1.NW_013658955v1 15708 6 + 356375 -----attctc------ i thaSir1.NW_013658955v1 C 0 C 0 s anoCar2.chrUn_GL343203 1483620 6 - 4717188 -----CTCCTT------ i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093052 6 + 248956422 -----TTATTT------ i hg38.chr1 C 0 C 0 s mm10.chr1 43995608 6 - 195471971 -----TTATTT------ i mm10.chr1 C 0 C 0 s xenTro9.chr4 29662741 6 - 133473341 -----TTTCAC------ i xenTro9.chr4 C 0 C 0 s xenLae2.chr4S 34791152 6 - 121245977 -----tttcac------ i xenLae2.chr4S C 0 C 0 s nanPar1.KN905951v1 787425 6 - 2428735 -----GTTCAC------ i nanPar1.KN905951v1 C 0 C 0 s fr3.chr22 6177124 6 - 11609757 -----ATATCT------ i fr3.chr22 N 0 I 6 s gasAcu1.chrIII 11632661 6 - 16798506 -----CTTTCC------ i gasAcu1.chrIII I 7 I 1 s angJap1.KI307563 7492 2 - 56816 ---------CC------ i angJap1.KI307563 I 1 I 4 s danRer11.chr2 23357439 3 + 59640629 --------TCT------ i danRer11.chr2 I 6 I 4 s letCam1.KE994637 91083 17 - 118437 ACTTAATTCCAATCTCG i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-3929.000000 s galGal6.chrUn_NW_020109905v1 1450 1 + 2898 -T s cotJap2.chr3 93672851 1 - 100941466 -T i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 123908 1 + 179485 -a i pytBiv1.KE955523 C 0 C 0 s thaSir1.NW_013658955v1 15714 1 + 356375 -a i thaSir1.NW_013658955v1 C 0 C 0 s anoCar2.chrUn_GL343203 1483626 1 - 4717188 -A i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093058 1 + 248956422 -A i hg38.chr1 C 0 C 0 s mm10.chr1 43995614 1 - 195471971 -A i mm10.chr1 C 0 C 0 s xenTro9.chr4 29662747 1 - 133473341 -A i xenTro9.chr4 C 0 C 0 s xenLae2.chr4S 34791158 1 - 121245977 -a i xenLae2.chr4S C 0 C 0 s nanPar1.KN905951v1 787431 1 - 2428735 -A i nanPar1.KN905951v1 C 0 C 0 s letCam1.KE994637 91100 1 - 118437 C- i letCam1.KE994637 C 0 C 0 e fr3.chr22 6177130 6 - 11609757 I e gasAcu1.chrIII 11632667 1 - 16798506 I e danRer11.chr2 23357442 4 + 59640629 I e angJap1.KI307563 7494 4 - 56816 I e phoRub1.KK418723 8607 1039 + 37146 I a score=884567.000000 s galGal6.chrUn_NW_020109905v1 1451 89 + 2898 ---GCAGGAAAGATTGTTTCACGTGTAATGAAAAGCTAGTGTCCAGAAGATCACTGCGGCCAGATGCCAATTTTGATGCCCTCGTCAGTAAG s cotJap2.chr3 93672852 89 - 100941466 ---GCAGGAAAGAATGTTTCATGTGTAATGAAAAACTGGTGTCCAGAAGATCACTGGGGCCAGATCCCAATGTTGCTGCACTCATCGGTAAC i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 123909 89 + 179485 ---gaAACAAAGAATGCCCTACTTGTCGTAAAAAGCTTGTTTCTAAAAGATCATTGAGACCAGATCCAAACTTCGATGCCCTCATCAGTAAA i pytBiv1.KE955523 C 0 C 0 s thaSir1.NW_013658955v1 15715 89 + 356375 ---gaaACAAAGAATGCCCTACTTGTCGTAAAAAGCTTGTTTCCAAAAGATCTTTGAGACCAGATCCAAATTTTGATGCCCTCATCAGTAAA i thaSir1.NW_013658955v1 C 0 C 0 s anoCar2.chrUn_GL343203 1483627 89 - 4717188 ---GAAACAAAGAATGCCCTACATGTCGTAAAAAGCTTGTTTCTAAAAGATCTTTGAGGCCAGACCCAAATTTTGATGCCCTCATCAGTAAA i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093059 89 + 248956422 ---GCAACAAAGAATGTCCTACCTGTCGGAAAAAACTAGTTTCCAAAAGATCACTAAGGCCAGACCCAAACTTTGATGCACTCATCAGCAAA i hg38.chr1 C 0 C 0 s mm10.chr1 43995615 89 - 195471971 ---GCAACAAAGAGTGTCCTACCTGTCGGAAAAAACTGGTTTCTAAAAGATCACTAAGGCCAGACCCGAACTTTGATGCACTCATCAGCAAG i mm10.chr1 C 0 C 0 s xenTro9.chr4 29662748 89 - 133473341 ---GAAACAAAGAGTGCCCTACCTGTAGGAAGAAGCTTGTTTCCAAAAGATCACTACGGCCAGATCCCAACTTCGATGCTCTGATAAGCAAA i xenTro9.chr4 C 0 C 0 s xenLae2.chr4S 34791159 89 - 121245977 ---gaaacaaAGAGTGCCCTACTTGTAGGAAGAAACTAGTTTCCAAAAGATCACTACGGCCAGATCCGAACTTTGACGCTCTGATAAGCAAA i xenLae2.chr4S C 0 C 0 s nanPar1.KN905951v1 787432 89 - 2428735 ---GAAATAAAGAATGTCCAACATGCCGTAAAAAATTGGTCTCCAAAAGATCGTTGCGCCCAGATCCAAACTTTGATGCCCTTATCAGTAAG i nanPar1.KN905951v1 C 0 C 0 s tetNig2.chrUn_random 84948898 89 - 107808587 ---gTAATAAAGAATGTCCCACCTGCCGTAAGAAGCTGGTGTCTAAGAGGTCCCTGCGTCCTGACCCGAACTTTGATGCTCTGATAAGTAAG i tetNig2.chrUn_random N 0 I 14 s fr3.chr22 6177136 89 - 11609757 ---GTAATAAAGAATGTCCCACCTGTCGTAAGAAGCTGGTGTCGAAGAGGTCGCTGCGTCCTGACCCTAATTTTGACGCCCTGATAAGTAAG i fr3.chr22 I 6 I 11 s oreNil3.chrUn_NW_017615958v1 180037 89 - 329220 ---GTAATAAAGAGTGTCCTACCTGTCGTAAGAAGCTGGTGTCCAAGAGATCGCTGCGCCCAGACCCCAATTTTGATGCTCTGATTAGTAAG i oreNil3.chrUn_NW_017615958v1 N 0 I 2 s mayZeb1.JH720898 126521 89 + 174807 ---GTAATAAAGAGTGTCCTACCTGTCGTAAGAAGCTGGTGTCCAAGAGATCGCTGCGTCCAGACCCCAATTTTGATGCTCTGATTAGTAAG i mayZeb1.JH720898 N 0 I 2 s oryLat2.chr17 25649946 89 - 31848461 ---GGAACAAAGAGTGTCCTACCTGTCGTAAGAAGCTGGTGTCAAAGAGGTCGCTGCGTCCAGACCCCAACTTCGATGCTCTGATCAGTAAG i oryLat2.chr17 N 0 N 0 s gasAcu1.chrIII 11632668 89 - 16798506 ---GTAATAAAGAGTGTCCTACCTGTCGTAAGAAGTTGGTATCCAAGAGATCGCTGCGTCCAGACCCGAACTTTGATGCGCTGATTAGTAAG i gasAcu1.chrIII I 1 I 2 s angJap1.KI307563 7498 89 - 56816 ---GGAACAAAGAGTGTCCAACGTGCAGGAAGAAGCTGGTGTCGAAGCGCTCCCTAAGGCCAGACCCCAACTTTGACGCGCTGATCAGTAAG i angJap1.KI307563 I 4 C 0 s danRer11.chr2 23357446 89 + 59640629 ---GGAATAAGGAGTGTCCAACATGCAGAAAGAAGCTGGTGTCTAAGCGCTCTCTTCGTCCAGACCCTAACTTTGACGCTCTGATCAGTAAG i danRer11.chr2 I 4 C 0 s letCam1.KE994637 91101 92 - 118437 GCAGGAACAAGGAATGCCCCACGTGCCGCAAGAAGCTGGTGTCGAAGCGCTCGCTGCGCCCCGACCCCAACTTCGACGCTCTCATCTCCAAG i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=-4307.000000 s galGal6.chrUn_NW_020109905v1 1540 9 + 2898 ACTTGT-CAA s cotJap2.chr3 93672941 10 - 100941466 ACGTGTCCAG i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 123998 10 + 179485 ATTTACCCAA i pytBiv1.KE955523 C 0 C 0 s thaSir1.NW_013658955v1 15804 10 + 356375 ATTTACCCAA i thaSir1.NW_013658955v1 C 0 C 0 s anoCar2.chrUn_GL343203 1483716 10 - 4717188 ATCTATCCAA i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093148 10 + 248956422 ATTTATCCAA i hg38.chr1 C 0 C 0 s mm10.chr1 43995704 10 - 195471971 ATTTATCCCA i mm10.chr1 C 0 C 0 s xenTro9.chr4 29662837 10 - 133473341 ATCTACCCAA i xenTro9.chr4 C 0 C 0 s xenLae2.chr4S 34791248 10 - 121245977 ATCTATCCAA i xenLae2.chr4S C 0 C 0 s nanPar1.KN905951v1 787521 10 - 2428735 ATCTACCCAA i nanPar1.KN905951v1 C 0 C 0 s tetNig2.chrUn_random 84949001 5 - 107808587 ATACA----- i tetNig2.chrUn_random I 14 I 77 s fr3.chr22 6177236 5 - 11609757 ATACA----- i fr3.chr22 I 11 I 72 s oreNil3.chrUn_NW_017615958v1 180128 5 - 329220 ACGTC----- i oreNil3.chrUn_NW_017615958v1 I 2 I 5008 s mayZeb1.JH720898 126612 5 + 174807 ATGTC----- i mayZeb1.JH720898 I 2 I 2 s gasAcu1.chrIII 11632759 5 - 16798506 ATCAA----- i gasAcu1.chrIII I 2 C 0 s angJap1.KI307563 7587 5 - 56816 ATCTA----- i angJap1.KI307563 C 0 I 5 s danRer11.chr2 23357535 5 + 59640629 ATCTA----- i danRer11.chr2 C 0 I 5 s letCam1.KE994637 91193 10 - 118437 ATCTACCCGA i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=15300.000000 s galGal6.chrUn_NW_020109905v1 1549 1 + 2898 G s cotJap2.chr3 93672951 1 - 100941466 G i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 124008 1 + 179485 G i pytBiv1.KE955523 C 0 C 0 s thaSir1.NW_013658955v1 15814 1 + 356375 G i thaSir1.NW_013658955v1 C 0 C 0 s anoCar2.chrUn_GL343203 1483726 1 - 4717188 G i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093158 1 + 248956422 G i hg38.chr1 C 0 C 0 s mm10.chr1 43995714 1 - 195471971 G i mm10.chr1 C 0 C 0 s xenTro9.chr4 29662847 1 - 133473341 G i xenTro9.chr4 C 0 C 0 s xenLae2.chr4S 34791258 1 - 121245977 G i xenLae2.chr4S C 0 C 0 s nanPar1.KN905951v1 787531 1 - 2428735 G i nanPar1.KN905951v1 C 0 C 0 s tetNig2.chrUn_random 84949083 1 - 107808587 G i tetNig2.chrUn_random I 77 C 0 s fr3.chr22 6177313 1 - 11609757 G i fr3.chr22 I 72 C 0 s oreNil3.chrUn_NW_017615958v1 185141 1 - 329220 G i oreNil3.chrUn_NW_017615958v1 I 5008 C 0 s mayZeb1.JH720898 126619 1 + 174807 G i mayZeb1.JH720898 I 2 N 0 s gasAcu1.chrIII 11632764 1 - 16798506 G i gasAcu1.chrIII C 0 C 0 s angJap1.KI307563 7597 1 - 56816 G i angJap1.KI307563 I 5 C 0 s danRer11.chr2 23357545 1 + 59640629 G i danRer11.chr2 I 5 C 0 s letCam1.KE994637 91203 1 - 118437 G i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=743652.000000 s galGal6.chrUn_NW_020109905v1 1550 117 + 2898 CCCTGATGTATGTGAAGCTCATGAGGAGGGAATGCTAGCAAG-AATCAGCTAACACA---AT-AGCAGCAAGCTTTCAGTGACAGCGTTCAGGAAGGG-TGGCGattcaggctgggagcaggt s cotJap2.chr3 93672952 117 - 100941466 CCCTGATGTATCTGAAGCTGATCAGGAGGGAATGCTGGCAAG-CATCAGCTGACGCA---AT-GCCAGCAAGCTTTCAGTCACAGTGTTAAGGAAGGA-TGAAGACGCGGGCTGGGAACAGTT i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 124009 119 + 179485 TCGTGATGAATATGAGGCTCACCAGGAGAGAGTTTTAGCAAG-GATCAGCAAGCACA---ATAATCAGCAAGCTTTGAGCCACAGCATTGAGGAGGGTCTGAAAATCCAGGCCTTGAACAGGT i pytBiv1.KE955523 C 0 C 0 s thaSir1.NW_013658955v1 15815 119 + 356375 TCGTGATGAATATGAGGCTCACCAGGAGAGAGTTTTAGCAAG-GATCAGCAAGCACA---ATAATCAGCAGGCTTTGAGCCACAGCATTGAGGAGGGCCTGAAAATCCAAGCCTTGAACCGGT i thaSir1.NW_013658955v1 C 0 C 0 s anoCar2.chrUn_GL343203 1483727 119 - 4717188 CCGTGATGAATATGAGGCTCATCAGGAGAGAGTTCTAGCAAG-AATCAACAAGCACA---ATAATCAGCAAGCTCTAAGTCACAGCATTGAGGAGGGTTTGAAAATCCAGGCTCTGAACAGGT i anoCar2.chrUn_GL343203 C 0 C 0 s hg38.chr1 185093159 119 + 248956422 TCGTGATGAGTATGAAGCTCATCAAGAGAGAGTATTAGCCAG-GATCAACAAGCACA---ATAATCAGCAAGCACTCAGTCACAGCATTGAGGAAGGACTGAAGATACAGGCCATGAACAGGT i hg38.chr1 C 0 C 0 s mm10.chr1 43995715 119 - 195471971 TCGTGATGAGTATGAAGCGCATCAGGAAAGGGTCTTAGCAAG-GATCAACAAACACA---ACAATCAGCAGGCTCTCAGCCACAGCATCGAGGAGGGGCTGAAGATACAGGCCATGAACAGGT i mm10.chr1 C 0 C 0 s xenTro9.chr4 29662848 119 - 133473341 TCGTGATGAGTATGAAGCTCACCAGGAGAGAGTATTAGCCCG-GATTAATAAGCATA---ACAACCAGCAGGCACTTAGTCACAGTATTGAGGAAGGATTGAAGATACAAGCCTTGAACAGGT i xenTro9.chr4 C 0 C 0 s xenLae2.chr4S 34791259 119 - 121245977 TCGGGATGAGTATGAAGCTCACCAGGAGAGAGTATTAGCCAG-GATTAATAAGCATA---ACAACCAGCAGGCTCTTAGTCACAGTATTGAGGAAGGATTGAAGATACAAGCCCTGAACAGGT i xenLae2.chr4S C 0 C 0 s nanPar1.KN905951v1 787532 119 - 2428735 CCGAGATGAATATGAAGCTCACCAGGAAAGAGTACTGGCCAG-GATCAGCAAACATA---ACAATCAACAAGCACTGAGTCACAGTATTGAAGAAGGTCTTAAGATACAAGCAATGAACAGGT i nanPar1.KN905951v1 C 0 C 0 s tetNig2.chrUn_random 84949084 119 - 107808587 CCGTGACGAGTACGAAGCCCACCAGGAGAGAGTATTAGCCCG-TATTAGCAAACACA---ACAACCAGCAGGCCCTGTCCCACAGCATAGAGGAGGGGCTGAAGATCCAGGCCATGACCAGGT i tetNig2.chrUn_random C 0 C 0 s fr3.chr22 6177314 119 - 11609757 CCGTGATGAGTATGAAGCCCACCAGGAGAGAGTGTTGGCCCG-TATTAGTAAACACA---ACAACCAGCAGGCCCTGTCCCACAGCATAGAGGAGGGCCTGAAGATCCAGGCCATGACCAGGT i fr3.chr22 C 0 C 0 s oreNil3.chrUn_NW_017615958v1 185142 119 - 329220 CCGTGACGAGTACGAAGCCCACCAGGAAAGAGTTTTGGCCCG-CATCAGCAAACACA---ACAACCAGCAAGCCTTATCCCACAGCATAGAAGAAGGGCTGAAGATACAGGCTATGACCAGGT i oreNil3.chrUn_NW_017615958v1 C 0 C 0 s gasAcu1.chrIII 11632765 86 - 16798506 -------------GAGGTTC------------TGTCAAACCGCTAGCAGCAAACACATTGAAGATTATTAGGGCCCG---AGCAATTCAAGTGTGGGG---------CAGTATGGGTGTAGGT i gasAcu1.chrIII C 0 C 0 s angJap1.KI307563 7598 119 - 56816 CAGAGATGAGTATGAGGCCCACCAGGAGCGGGTTTTGGCCCG-CATCAGCAAACACA---ACAACCAGCAAGCCCTCAGCGACAGCATCGAGGAGGGCCTAAAGATCCAGGCCATATACCGGT i angJap1.KI307563 C 0 N 0 s danRer11.chr2 23357546 119 + 59640629 CAGAGACGAATACGAAGCCCACCAGGAGAGAGTGCTGGCCCG-CATCAGCAAACACA---ACAACCAGCAGGCGCTCAGCCACAGTATCGAAGAAGGCCTAAAAATCCAGGCCATGAACAGGT i danRer11.chr2 C 0 I 1 s letCam1.KE994637 91204 119 - 118437 CCGCGAGGAGTACGAGGCCATCCAGGAGCGCGTGCTCAACCG-CCTGCAGAAGCACC---ACAACCAGCAGGCGCTCAGCGTCTCCATCGCCGAGGGGCTCAAGATGCAGGCGCAGAACCGGT i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=6559.000000 s galGal6.chrUn_NW_020109905v1 1667 1 + 2898 a s cotJap2.chr3 93673069 1 - 100941466 T i cotJap2.chr3 C 0 C 0 s pytBiv1.KE955523 124128 1 + 179485 A i pytBiv1.KE955523 C 0 N 0 s thaSir1.NW_013658955v1 15934 1 + 356375 A i thaSir1.NW_013658955v1 C 0 N 0 s anoCar2.chrUn_GL343203 1483846 1 - 4717188 A i anoCar2.chrUn_GL343203 C 0 N 0 s hg38.chr1 185093278 1 + 248956422 A i hg38.chr1 C 0 C 0 s mm10.chr1 43995834 1 - 195471971 A i mm10.chr1 C 0 N 0 s xenTro9.chr4 29662967 1 - 133473341 A i xenTro9.chr4 C 0 I 5 s xenLae2.chr4S 34791378 1 - 121245977 A i xenLae2.chr4S C 0 N 0 s nanPar1.KN905951v1 787651 1 - 2428735 A i nanPar1.KN905951v1 C 0 N 0 s tetNig2.chrUn_random 84949203 1 - 107808587 A i tetNig2.chrUn_random C 0 N 0 s fr3.chr22 6177433 1 - 11609757 A i fr3.chr22 C 0 I 1 s oreNil3.chrUn_NW_017615958v1 185261 1 - 329220 A i oreNil3.chrUn_NW_017615958v1 C 0 N 0 s gasAcu1.chrIII 11632851 1 - 16798506 A i gasAcu1.chrIII C 0 C 0 s letCam1.KE994637 91323 1 - 118437 A i letCam1.KE994637 C 0 C 0 e danRer11.chr2 23357665 1 + 59640629 I e phoRub1.KK418723 8607 1039 + 37146 I a score=-287.000000 s galGal6.chrUn_NW_020109905v1 1668 1 + 2898 T s cotJap2.chr3 93673070 1 - 100941466 G i cotJap2.chr3 C 0 C 0 s hg38.chr1 185093279 1 + 248956422 T i hg38.chr1 C 0 N 0 s danRer11.chr2 23357666 1 + 59640629 T i danRer11.chr2 I 1 C 0 s letCam1.KE994637 91324 1 - 118437 C i letCam1.KE994637 C 0 C 0 e fr3.chr22 6177434 1 - 11609757 I e gasAcu1.chrIII 11632852 0 - 16798506 C e xenTro9.chr4 29662968 5 - 133473341 I e phoRub1.KK418723 8607 1039 + 37146 I a score=375.000000 s galGal6.chrUn_NW_020109905v1 1669 1 + 2898 G s cotJap2.chr3 93673071 1 - 100941466 G i cotJap2.chr3 C 0 C 0 s xenTro9.chr4 29662973 1 - 133473341 C i xenTro9.chr4 I 5 C 0 s gasAcu1.chrIII 11632852 1 - 16798506 G i gasAcu1.chrIII C 0 I 1 s danRer11.chr2 23357667 1 + 59640629 G i danRer11.chr2 C 0 N 0 s letCam1.KE994637 91325 1 - 118437 G i letCam1.KE994637 C 0 C 0 e fr3.chr22 6177434 1 - 11609757 I e phoRub1.KK418723 8607 1039 + 37146 I a score=-2701.000000 s galGal6.chrUn_NW_020109905v1 1670 2 + 2898 --GC s cotJap2.chr3 93673072 2 - 100941466 --TC i cotJap2.chr3 C 0 C 0 s xenTro9.chr4 29662974 2 - 133473341 --CT i xenTro9.chr4 C 0 C 0 s fr3.chr22 6177435 2 - 11609757 --GC i fr3.chr22 I 1 N 0 s gasAcu1.chrIII 11632854 2 - 16798506 --TC i gasAcu1.chrIII I 1 I 7 s letCam1.KE994637 91326 2 - 118437 GA-- i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=1037.000000 s galGal6.chrUn_NW_020109905v1 1672 14 + 2898 -ATCCCCTGACTTGA s cotJap2.chr3 93673074 14 - 100941466 -ATCACCTGATTTGG i cotJap2.chr3 C 0 C 0 s xenTro9.chr4 29662976 14 - 133473341 -GTGGGCTGATATGG i xenTro9.chr4 C 0 I 1 s gasAcu1.chrIII 11632863 14 - 16798506 -ATTCCTGGACTTAA i gasAcu1.chrIII I 7 C 0 s letCam1.KE994637 91328 15 - 118437 CTGCcgctcgctcgg i letCam1.KE994637 C 0 C 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=1288.000000 s galGal6.chrUn_NW_020109905v1 1686 2 + 2898 CC s cotJap2.chr3 93673088 2 - 100941466 CC i cotJap2.chr3 C 0 C 0 s carCri1.KK509948 18278 2 - 19506 CC i carCri1.KK509948 N 0 C 0 s xenTro9.chr4 29662991 2 - 133473341 CT i xenTro9.chr4 I 1 C 0 s gasAcu1.chrIII 11632877 2 - 16798506 TT i gasAcu1.chrIII C 0 C 0 s letCam1.KE994637 91343 2 - 118437 cc i letCam1.KE994637 C 0 N 0 e phoRub1.KK418723 8607 1039 + 37146 I a score=758.000000 s galGal6.chrUn_NW_020109905v1 1688 2 + 2898 AT s cotJap2.chr3 93673090 2 - 100941466 AC i cotJap2.chr3 C 0 C 0 s phoRub1.KK418723 9646 1 + 37146 -T i phoRub1.KK418723 I 1039 N 0 s carCri1.KK509948 18280 1 - 19506 -T i carCri1.KK509948 C 0 N 0 s xenTro9.chr4 29662993 2 - 133473341 AT i xenTro9.chr4 C 0 C 0 s gasAcu1.chrIII 11632879 1 - 16798506 -T i gasAcu1.chrIII C 0 C 0 a score=2145.000000 s galGal6.chrUn_NW_020109905v1 1690 27 + 2898 GTGTAACTTGATGCTAGAAGTACACCa s cotJap2.chr3 93673092 27 - 100941466 ATGTAACTTGATGCTAGAAATACACCA i cotJap2.chr3 C 0 C 0 s xenTro9.chr4 29662995 23 - 133473341 GTGCAGCCCA----TAACAGTACACTG i xenTro9.chr4 C 0 C 0 s gasAcu1.chrIII 11632880 27 - 16798506 GTCCCTTTTCAGGCAAGATCTATCCCA i gasAcu1.chrIII C 0 N 0 a score=-150.000000 s galGal6.chrUn_NW_020109905v1 1717 1 + 2898 c s cotJap2.chr3 93673119 1 - 100941466 G i cotJap2.chr3 C 0 C 0 s xenTro9.chr4 29663018 1 - 133473341 C i xenTro9.chr4 C 0 N 0 a score=5530.000000 s galGal6.chrUn_NW_020109905v1 1718 94 + 2898 gtcctccctccctgcatggCAAGAGATGGCTCTCTTCTCCTGCAAGGGCAGCCAAAGTAACTTCTGTGTGCTGActagagagagaaaacttgGT s cotJap2.chr3 93673120 94 - 100941466 GTCCTCACTCCCTGCATAGCAAGAGATTCCTCCGTTCTCCTCCAAAAGCTGCCAAAGTAACTTCTGTGTGATGAGTGCTGAGATCAAACTTTGT i cotJap2.chr3 C 0 I 779 a score=0.000000 s galGal6.chrUn_NW_020109905v1 1812 42 + 2898 GTCACTCCTTGCAAGTCCTGTGGCAGCCAGATATTGTGTTAG e cotJap2.chr3 93673214 779 - 100941466 I a score=-168.000000 s galGal6.chrUn_NW_020109905v1 1854 4 + 2898 CCAC s mesUni1.KK798872 16020 4 + 42658 CTTA i mesUni1.KK798872 N 0 N 0 e cotJap2.chr3 93673214 779 - 100941466 I a score=0.000000 s galGal6.chrUn_NW_020109905v1 1858 29 + 2898 TCACAGGTAGCATGTCTTTGGTATCAGGG e cotJap2.chr3 93673214 779 - 100941466 I a score=297.000000 s galGal6.chrUn_NW_020109905v1 1887 8 + 2898 TGTAAGAG s picPub1.KL217235 4464202 8 + 4559572 TAGGAGAG i picPub1.KL217235 N 0 I 80 e cotJap2.chr3 93673214 779 - 100941466 I a score=273.000000 s galGal6.chrUn_NW_020109905v1 1895 3 + 2898 AAT s cotJap2.chr2 70909903 3 + 134823679 AAT i cotJap2.chr2 n 779 I 120 e picPub1.KL217235 4464210 80 + 4559572 I a score=0.000000 s galGal6.chrUn_NW_020109905v1 1898 87 + 2898 GAACTCTGTAGGAGCGCTGCTGTCATAGGCCACCAAGGGCCTGGGATGCCTGGCTGAAATTTGATGTTGCAGATACCTTGGTGTCAC e cotJap2.chr2 70909906 120 + 134823679 I e picPub1.KL217235 4464210 80 + 4559572 I a score=-54.000000 s galGal6.chrUn_NW_020109905v1 1985 3 + 2898 TGG s picPub1.KL217235 4464290 3 + 4559572 AAG i picPub1.KL217235 I 80 N 0 e cotJap2.chr2 70909906 120 + 134823679 I a score=0.000000 s galGal6.chrUn_NW_020109905v1 1988 27 + 2898 AATCCATGGAGCTGACACAGTCCTCTG e cotJap2.chr2 70909906 120 + 134823679 I a score=232.000000 s galGal6.chrUn_NW_020109905v1 2015 8 + 2898 ATGGCTGG s cotJap2.chr2 70910026 8 + 134823679 GGGGCTGt i cotJap2.chr2 I 120 n 120 a score=0.000000 s galGal6.chrUn_NW_020109905v1 2023 171 + 2898 ATTTCTGCTTGCTAAGGGTATTCCTTCTGGTTTCTTggcttttcaggtgatttttgctttgctttccttggctttttagtacttcctccttctgttattgCTCCTGGCttagttttgctttgctctttggtttttcttttgtacctttgccttgcattgcttgtgaatatt e cotJap2.chr2 70910034 120 + 134823679 n a score=3659.000000 s galGal6.chrUn_NW_020109905v1 2194 74 + 2898 tgtttattccttctcttcagtgctAAGCATTGGTGAGTGTTTTTACTGTGTTTGGCTTCTTTGGTTTGCCACGA s cotJap2.chr3 93673993 74 - 100941466 tgttctttctttctttccagagcTCATCGTTGGGGAGCGTTTTTATCTTATTCAGACTCTTTGCTTTGCCATGA i cotJap2.chr3 I 779 I 26 a score=0.000000 s galGal6.chrUn_NW_020109905v1 2268 25 + 2898 TATACACGAGTAAAGCAAATGAATG e cotJap2.chr3 93674067 26 - 100941466 I a score=22514.000000 s galGal6.chrUn_NW_020109905v1 2293 600 + 2898 GAATGCAGTATGGTGACTTGTTT-GAATTGCTTTGTCTTCCtcgtttggttgtttttccc-ctattgcttttcagtagtgcgccttttgctttgctttccattgtctttgtgtctgttCTGTTGGCTCTTTGTCTtagctgttcctttctttgcattagcttcttcctcccagaggagagcattccttgccttttcagaggatggttcttgg---------------ctttgcttggagtttctcccttgctcttcATTCTTGGTTGCCTtacctggctttgccttccttgtccccttgccccggccttgc-tcttcctttgccttcacttACCTGATGTGCTCTCTCCCTTGAttgttctcttctgtctgttcctttctggcttcttgaactgcagcctcctctctgggctttcctgccgtgcttgatgcatttgcagct-------ccttGGAGTTTCCCAGGTGGGTCCACGCCTCCTGGGCCTCCTTGCCTCTTCCCTTGTGGTGCTCTTGtggctttttctc---cagctggctGGATCCATGC-----GGCCTATTGCCCCATTTTCTCGGCATTGCTGTATGTGGATTGTTCTCTGTCATCTTCCCAGGCCTAGATGCTGAGTTTT s cotJap2.chr3 93674093 613 - 100941466 GTTTGTATTTCTAGaccttgttttgctttgctctgttttccctgtttgtttggtattcttacctttgcttttctttagtgCCCCCGTGGCTTTGCTTTCCACGGTCTTTGTTTCATGTTCGTTGCTTCTTTGTCTGTCTGGTTCCTTTCTTTGCATTCCCTTTATCCTT---GATGAGgtcattcttttccttttgagactctttttttttttttttttttttctctctttgctttgagtttctcctttccttttcattctt-----ccttgcctggctttgctttccttgtccccttgcccgtgcctttcctCttactttcccttcccttaccTGATGTTCTCTCGCCCTCAACTGTCTTGTTTGGTTTATTCGTTTCTGGCTTCTTATTATCCAGCCTCCTCTTTgg-ctttccttctctgcttgatgcatttgcagttgttttttcttctcattttcccaGGTGGGTCCACTCCTCCAGGACAATGATGCCTGTTCCCTTGTAGTGGTCTTGCAGCTTTTCCTCTGATAGCTGGCGAGATCCGTGCCCGGTAGCTACTAGTACCTCCTCCTTGGC-TGACTGCAGGtg-------ctctgccttcctccagAG---AGATGTTTGGTTCT i cotJap2.chr3 I 26 N 0