##maf version=1 scoring=roast.v3.3 a score=191.000000 s galGal6.chrUn_NW_020109926v1 0 2 + 3687 GA s araMac1.KE106114 1878 2 - 2728 GA i araMac1.KE106114 N 0 C 0 a score=-829.000000 s galGal6.chrUn_NW_020109926v1 2 1 + 3687 -A s cucCan1.JNOX01052133 10 1 - 439 -A i cucCan1.JNOX01052133 N 0 C 0 s araMac1.KE106114 1880 1 - 2728 C- i araMac1.KE106114 C 0 C 0 a score=476.000000 s galGal6.chrUn_NW_020109926v1 3 1 + 3687 C s cotJap2.chrUn_NW_015440561v1 1576 1 - 4764 C i cotJap2.chrUn_NW_015440561v1 N 0 C 0 s cucCan1.JNOX01052133 11 1 - 439 T i cucCan1.JNOX01052133 C 0 C 0 s amaVit1.AOCU01180583 53 1 + 435 C i amaVit1.AOCU01180583 N 0 C 0 s araMac1.KE106114 1881 1 - 2728 C i araMac1.KE106114 C 0 C 0 a score=1500.000000 s galGal6.chrUn_NW_020109926v1 4 1 + 3687 C s cotJap2.chrUn_NW_015440561v1 1577 1 - 4764 C i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2748 1 + 6027 c i melGal5.chrUn_NW_011216510v1 N 0 C 0 s cucCan1.JNOX01052133 12 1 - 439 C i cucCan1.JNOX01052133 C 0 C 0 s amaVit1.AOCU01180583 54 1 + 435 C i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 1882 1 - 2728 C i araMac1.KE106114 C 0 C 0 a score=15409.000000 s galGal6.chrUn_NW_020109926v1 5 15 + 3687 CCTTAGCCCCA-TAAG s cotJap2.chrUn_NW_015440561v1 1578 16 - 4764 CTTCTGCCCCAATAAG i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2749 15 + 6027 CCTCAGCCCCA-TAAA i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 13 15 - 439 TCTCAGCCCCA-TAAG i cucCan1.JNOX01052133 C 0 C 0 s mesUni1.KK803254 179 15 - 1908 CCCCAGACCCA-TAAG i mesUni1.KK803254 N 0 C 0 s amaVit1.AOCU01180583 55 15 + 435 ACACAGCCCCA-TAAG i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 1883 15 - 2728 TTTGGGACCCA-TAAG i araMac1.KE106114 C 0 C 0 a score=2548.000000 s galGal6.chrUn_NW_020109926v1 20 1 + 3687 T s cotJap2.chrUn_NW_015440561v1 1594 1 - 4764 T i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2764 1 + 6027 T i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 28 1 - 439 T i cucCan1.JNOX01052133 C 0 C 0 s mesUni1.KK803254 194 1 - 1908 T i mesUni1.KK803254 C 0 C 0 s amaVit1.AOCU01180583 70 1 + 435 T i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 1898 1 - 2728 T i araMac1.KE106114 C 0 C 0 s picPub1.KL216759 931 1 - 5278 T i picPub1.KL216759 N 0 I 143 a score=16702.000000 s galGal6.chrUn_NW_020109926v1 21 102 + 3687 GAACCCCTGGGCCCATAAGTGACCCTGT-GC-CCCATAAATG--AACCCctgtgccccataagtgaccctCTGTGCCCATAAGTG-gccctctgccccataagtgaa s cotJap2.chrUn_NW_015440561v1 1595 100 - 4764 GACATACTGTGCCCATAAGTGACCCTTC-CTGCCCATAAGTGACAAACCCTG---ACCATaagtgcccccc--accccatacagC-CCTTCCTGCCCCTCAAAGTGA i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2765 103 + 6027 GAACCTTCAGCCCCAGAAGTGAACCTtc-agccccataagtg--aaccCTCA-GACCCATAAGTGAACCCTCAGACCCATAAGTGAACCCTCTGCCCCATAAATGAA i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 29 101 - 439 GATCTCTCAGCCCCATAAGTGATCTCTC-AGCCCCACAAGTG--GCTTCTCA-GCCCCATAAATAGTTGACGTGGGCGATG-GTG-GTTCCCACTCTCGTGCAACGC i cucCan1.JNOX01052133 C 0 C 0 s mesUni1.KK803254 195 96 - 1908 AA-CCCCCAGTCCCATAAGTGATCCCT--AGACCCATAAGTG--ATCCCCTG--ACCCATAAGCAACC--TCTGACCCATATGTG--ATCTCTGACCCATAAGTGAC i mesUni1.KK803254 C 0 I 71 s amaVit1.AOCU01180583 71 81 + 435 CCTCTCCCAGCCCCATAAGTGACCCCC--AGTTCCGTAAGTG--TGCTTGT---------------------TGCTGCCTGTGTG-TGGGTCTGCCCCATAAGTGAT i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 1899 83 - 2728 GGTCCCTCCGACCCATAAGTGACCCTTTGGGACCCATAAGTT--CCCCCCTG--------------------TGCCCCATAAGTG-TGGGTCTGCCCC-CAAGTGAC i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 932 143 - 5278 I a score=4935.000000 s galGal6.chrUn_NW_020109926v1 123 41 + 3687 -CTTCTTTGCTCCATA-AGAG--AAgcctct-gccccataagtgtt s cotJap2.chrUn_NW_015440561v1 1695 41 - 4764 -CAGC-CGGCCCCATATAGTA--ACACCTCT-GCCCATAGAGCCTC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2868 39 + 6027 -CCtc--agccccata-agtg--aaccctca-gccccataagtgaa i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 130 38 - 439 -CCTT-----CGCATG-AGGGCTCTcccact-gccccccaagtgcc i cucCan1.JNOX01052133 C 0 C 0 s amaVit1.AOCU01180583 152 40 + 435 GCCCC--AGCCCCATA-AGTG--ACACCCCC-ACCCCATATGTGCC i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 1982 42 - 2728 CCTTT-GAGCCTCAGA-GGTG--AcccccccTGACCCATAATTGGA i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 932 143 - 5278 I e mesUni1.KK803254 291 71 - 1908 I a score=-6020.000000 s galGal6.chrUn_NW_020109926v1 164 3 + 3687 CC--------------------------C s cotJap2.chrUn_NW_015440561v1 1736 6 - 4764 CC-----------------------ACTC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2907 29 + 6027 ccTTCAGCGCCATAAGTGAACCtcagccc i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 168 3 - 439 cc--------------------------c i cucCan1.JNOX01052133 C 0 C 0 s amaVit1.AOCU01180583 192 3 + 435 CT--------------------------T i amaVit1.AOCU01180583 C 0 I 8 s araMac1.KE106114 2024 3 - 2728 CT--------------------------T i araMac1.KE106114 C 0 I 3 s picPub1.KL216759 1075 3 - 5278 CT--------------------------C i picPub1.KL216759 I 143 C 0 e mesUni1.KK803254 291 71 - 1908 I a score=1898.000000 s galGal6.chrUn_NW_020109926v1 167 5 + 3687 CATAA s cotJap2.chrUn_NW_015440561v1 1742 5 - 4764 CATAA i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2936 5 + 6027 cataa i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 171 2 - 439 tt--- i cucCan1.JNOX01052133 C 0 C 0 s mesUni1.KK803254 362 5 - 1908 catac i mesUni1.KK803254 I 71 I 30 s amaVit1.AOCU01180583 203 5 + 435 CATAA i amaVit1.AOCU01180583 I 8 C 0 s araMac1.KE106114 2030 5 - 2728 CATAA i araMac1.KE106114 I 3 C 0 s picPub1.KL216759 1078 2 - 5278 ---AA i picPub1.KL216759 C 0 C 0 a score=-123.000000 s galGal6.chrUn_NW_020109926v1 172 6 + 3687 G-TGCGT-------- s cotJap2.chrUn_NW_015440561v1 1747 7 - 4764 GTTGCCC-------- i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2941 6 + 6027 g-tgaac-------- i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 173 5 - 439 --tgccc-------- i cucCan1.JNOX01052133 C 0 C 0 s amaVit1.AOCU01180583 208 6 + 435 G-TGACC-------- i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2035 6 - 2728 G-TGACC-------- i araMac1.KE106114 C 0 C 0 s picPub1.KL216759 1080 14 - 5278 G-TGACCCCAAGTGA i picPub1.KL216759 C 0 I 83 e mesUni1.KK803254 367 30 - 1908 I a score=6692.000000 s galGal6.chrUn_NW_020109926v1 178 15 + 3687 CCttctgccccataa s cotJap2.chrUn_NW_015440561v1 1754 15 - 4764 TCTTCTGAGCCATAA i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2947 14 + 6027 cc-tcagccccataa i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 178 15 - 439 ctctcagccccACAA i cucCan1.JNOX01052133 C 0 C 0 s amaVit1.AOCU01180583 214 15 + 435 CCTCTGAGCCCTTAA i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2041 15 - 2728 CTTTAGGACCCATAA i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 1094 83 - 5278 I e mesUni1.KK803254 367 30 - 1908 I a score=-2348.000000 s galGal6.chrUn_NW_020109926v1 193 4 + 3687 gtg-g s cotJap2.chrUn_NW_015440561v1 1769 4 - 4764 GTG-A i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2961 4 + 6027 gtg-a i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 193 4 - 439 GTG-G i cucCan1.JNOX01052133 C 0 C 0 s mesUni1.KK803254 397 4 - 1908 GTGG- i mesUni1.KK803254 I 30 I 54 s amaVit1.AOCU01180583 229 3 + 435 GTG-- i amaVit1.AOCU01180583 C 0 I 1 s araMac1.KE106114 2056 3 - 2728 ATG-- i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 1094 83 - 5278 I a score=-1711.000000 s galGal6.chrUn_NW_020109926v1 197 20 + 3687 gCAATGTGCCCCACATGTGA s cotJap2.chrUn_NW_015440561v1 1773 19 - 4764 CAGCCCTGCTCCATAAGTA- i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2965 19 + 6027 accctctgccccataagtg- i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 197 20 - 439 GTTCTGAGCCCCACAAGTGT i cucCan1.JNOX01052133 C 0 C 0 s araMac1.KE106114 2059 1 - 2728 --------------A----- i araMac1.KE106114 C 0 I 1 e picPub1.KL216759 1094 83 - 5278 I e mesUni1.KK803254 401 54 - 1908 I e amaVit1.AOCU01180583 232 1 + 435 I a score=-31.000000 s galGal6.chrUn_NW_020109926v1 217 1 + 3687 a s cucCan1.JNOX01052133 217 1 - 439 G i cucCan1.JNOX01052133 C 0 C 0 e picPub1.KL216759 1094 83 - 5278 I e mesUni1.KK803254 401 54 - 1908 I e melGal5.chrUn_NW_011216510v1 2984 0 + 6027 C e amaVit1.AOCU01180583 232 1 + 435 I e cotJap2.chrUn_NW_015440561v1 1792 0 - 4764 C e araMac1.KE106114 2060 1 - 2728 I a score=910.000000 s galGal6.chrUn_NW_020109926v1 218 7 + 3687 cccctgt s melGal5.chrUn_NW_011216510v1 2984 7 + 6027 cctcTCA i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 218 7 - 439 GGTCGGC i cucCan1.JNOX01052133 C 0 C 0 s amaVit1.AOCU01180583 233 7 + 435 Tccctgt i amaVit1.AOCU01180583 I 1 C 0 s araMac1.KE106114 2061 7 - 2728 cccctgt i araMac1.KE106114 I 1 C 0 e picPub1.KL216759 1094 83 - 5278 I e mesUni1.KK803254 401 54 - 1908 I e cotJap2.chrUn_NW_015440561v1 1792 0 - 4764 C a score=1500.000000 s galGal6.chrUn_NW_020109926v1 225 1 + 3687 g s melGal5.chrUn_NW_011216510v1 2991 1 + 6027 G i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 225 1 - 439 G i cucCan1.JNOX01052133 C 0 C 0 s mesUni1.KK803254 455 1 - 1908 G i mesUni1.KK803254 I 54 I 76 s amaVit1.AOCU01180583 240 1 + 435 g i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2068 1 - 2728 g i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 1094 83 - 5278 I e cotJap2.chrUn_NW_015440561v1 1792 0 - 4764 C a score=1778.000000 s galGal6.chrUn_NW_020109926v1 226 10 + 3687 cccca-----gagcT s cotJap2.chrUn_NW_015440561v1 1792 7 - 4764 ---CC-----GAcct i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 2992 15 + 6027 CCCCATAAATGAACc i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01052133 226 10 - 439 CCCCC-----CAACT i cucCan1.JNOX01052133 C 0 N 0 s amaVit1.AOCU01180583 241 10 + 435 cccca-----taagt i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2069 10 - 2728 ccccc-----taagt i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 1094 83 - 5278 I e mesUni1.KK803254 456 76 - 1908 I a score=166.000000 s galGal6.chrUn_NW_020109926v1 236 18 + 3687 GTCACTCATTtgccccat s cotJap2.chrUn_NW_015440561v1 1799 11 - 4764 tcc-------tgccccac i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3007 11 + 6027 ttc-------tgccccat i melGal5.chrUn_NW_011216510v1 C 0 C 0 s amaVit1.AOCU01180583 251 7 + 435 -----------gaccccc i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2079 18 - 2728 gccccccatgcgaccccc i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 1094 83 - 5278 I e mesUni1.KK803254 456 76 - 1908 I a score=-1390.000000 s galGal6.chrUn_NW_020109926v1 254 1 + 3687 -a s cotJap2.chrUn_NW_015440561v1 1810 1 - 4764 -a i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3018 1 + 6027 -a i melGal5.chrUn_NW_011216510v1 C 0 C 0 s amaVit1.AOCU01180583 258 1 + 435 -a i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2097 1 - 2728 -a i araMac1.KE106114 C 0 C 0 s picPub1.KL216759 1177 1 - 5278 C- i picPub1.KL216759 I 83 I 45 e mesUni1.KK803254 456 76 - 1908 I a score=6296.000000 s galGal6.chrUn_NW_020109926v1 255 54 + 3687 agtaccccatctgccccataagtgcccc--at---------------ctgccccataagtgtccaactctg s cotJap2.chrUn_NW_015440561v1 1811 56 - 4764 agtgcaACAcctgacccataagtgacacGAGC---------------CAGCCCCATAAAGTAAcacctctg i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3019 53 + 6027 agtgaaccttcagccccataagtgaacc--ct---------------ctgccccataagtgaac-tctctg i melGal5.chrUn_NW_011216510v1 C 0 C 0 s amaVit1.AOCU01180583 259 48 + 435 aacacctccccagccccataagtgcccc--ct-------------------cccaaaagtgtgg-ggcc-g i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2098 67 - 2728 aac-ccccccaagccccataagtgaccc--ctgctgtgtgaccccTTGAGCCGCAGAAGTGACT-ccccag i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 1178 45 - 5278 I e mesUni1.KK803254 456 76 - 1908 I a score=200.000000 s galGal6.chrUn_NW_020109926v1 309 2 + 3687 -cc s cotJap2.chrUn_NW_015440561v1 1867 2 - 4764 -cc i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3072 2 + 6027 -cc i melGal5.chrUn_NW_011216510v1 C 0 C 0 s amaVit1.AOCU01180583 307 2 + 435 -cc i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2165 2 - 2728 -cc i araMac1.KE106114 C 0 C 0 s picPub1.KL216759 1223 2 - 5278 AC- i picPub1.KL216759 I 45 C 0 e mesUni1.KK803254 456 76 - 1908 I a score=1680.000000 s galGal6.chrUn_NW_020109926v1 311 4 + 3687 -ccat s cotJap2.chrUn_NW_015440561v1 1869 4 - 4764 -ccat i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3074 4 + 6027 -ccat i melGal5.chrUn_NW_011216510v1 C 0 C 0 s mesUni1.KK803254 532 4 - 1908 -CTAT i mesUni1.KK803254 I 76 N 0 s amaVit1.AOCU01180583 309 4 + 435 -ccct i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2167 4 - 2728 -ccgt i araMac1.KE106114 C 0 C 0 s picPub1.KL216759 1225 3 - 5278 CCC-- i picPub1.KL216759 C 0 C 0 a score=3957.000000 s galGal6.chrUn_NW_020109926v1 315 4 + 3687 aact s cotJap2.chrUn_NW_015440561v1 1873 4 - 4764 aagt i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3078 4 + 6027 aagt i melGal5.chrUn_NW_011216510v1 C 0 C 0 s amaVit1.AOCU01180583 313 4 + 435 aagt i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2171 4 - 2728 aaat i araMac1.KE106114 C 0 C 0 s picPub1.KL216759 1228 4 - 5278 AAGT i picPub1.KL216759 C 0 I 24 a score=-4164.000000 s galGal6.chrUn_NW_020109926v1 319 25 + 3687 g-cccc---ccgtgc--cccataagt---------gcccc s cotJap2.chrUn_NW_015440561v1 1877 27 - 4764 g-cccctCTCCAAAC--TCCA-AAGT---------GCCCC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3082 33 + 6027 g-ctcC---CCA-GC--CCCATAAGTACACACtcagcccc i melGal5.chrUn_NW_011216510v1 C 0 C 0 s amaVit1.AOCU01180583 317 29 + 435 g---cc---ccgtgc--cccaTAGGG--CTCTGTGGCGC- i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2175 29 - 2728 ggtccc---ccgagcaatcc--------ccccgtagcccc i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 1232 24 - 5278 I a score=-5891.000000 s galGal6.chrUn_NW_020109926v1 344 12 + 3687 at--------aagtgtgact s cotJap2.chrUn_NW_015440561v1 1904 20 - 4764 TTTCTGCCCAAAGTGACAAC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3115 10 + 6027 at--------aagtg--aac i melGal5.chrUn_NW_011216510v1 C 0 C 0 s amaVit1.AOCU01180583 346 11 + 435 -C--------AGGGGGCTGC i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2204 12 - 2728 AC--------AAGTGGCTCC i araMac1.KE106114 C 0 C 0 s picPub1.KL216759 1256 11 - 5278 --------CCAAGTGACCT- i picPub1.KL216759 I 24 I 29 a score=-212.000000 s galGal6.chrUn_NW_020109926v1 356 29 + 3687 cc------atgccccataagtgcccccca-tgcccc- s cotJap2.chrUn_NW_015440561v1 1924 31 - 4764 TG------TTCGCCCATAAGTGACCCTCACTGCCCCA i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3125 29 + 6027 ct------cagccccataagtgaaccctc-tgcccc- i melGal5.chrUn_NW_011216510v1 C 0 C 0 s amaVit1.AOCU01180583 357 29 + 435 GGCTGGAGCAGACCCG------GCCCTTT-GGCCCC- i amaVit1.AOCU01180583 C 0 C 0 s araMac1.KE106114 2216 30 - 2728 ACC-----CAGCCCCATAAGTCGTCTCCC-AGCCCC- i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 1267 29 - 5278 I a score=4419.000000 s galGal6.chrUn_NW_020109926v1 385 8 + 3687 ataagtgt s cotJap2.chrUn_NW_015440561v1 1955 8 - 4764 ATAAGTGC i cotJap2.chrUn_NW_015440561v1 C 0 I 1 s melGal5.chrUn_NW_011216510v1 3154 7 + 6027 ataagtg- i melGal5.chrUn_NW_011216510v1 C 0 C 0 s amaVit1.AOCU01180583 386 8 + 435 ATAAGTGT i amaVit1.AOCU01180583 C 0 N 0 s araMac1.KE106114 2246 8 - 2728 ATAAGTGA i araMac1.KE106114 C 0 C 0 s picPub1.KL216759 1296 7 - 5278 CCAAGTG- i picPub1.KL216759 I 29 C 0 a score=319.000000 s galGal6.chrUn_NW_020109926v1 393 2 + 3687 ca s cotJap2.chrUn_NW_015440561v1 1964 2 - 4764 AA i cotJap2.chrUn_NW_015440561v1 I 1 C 0 s melGal5.chrUn_NW_011216510v1 3161 2 + 6027 aa i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 1303 1 - 5278 -A i picPub1.KL216759 C 0 I 13 e araMac1.KE106114 2254 0 - 2728 C a score=3051.000000 s galGal6.chrUn_NW_020109926v1 395 13 + 3687 ctctgtgccccat s cotJap2.chrUn_NW_015440561v1 1966 13 - 4764 CCCTGAACGCCAT i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3163 13 + 6027 cccTCAGACCCAT i melGal5.chrUn_NW_011216510v1 C 0 C 0 s araMac1.KE106114 2254 13 - 2728 CCCCCAGTTCCAT i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 1304 13 - 5278 I a score=-1660.000000 s galGal6.chrUn_NW_020109926v1 408 1 + 3687 -a s cotJap2.chrUn_NW_015440561v1 1979 1 - 4764 -A i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3176 1 + 6027 -A i melGal5.chrUn_NW_011216510v1 C 0 C 0 s araMac1.KE106114 2267 1 - 2728 -G i araMac1.KE106114 C 0 C 0 s picPub1.KL216759 1317 1 - 5278 C- i picPub1.KL216759 I 13 I 109 a score=15977.000000 s galGal6.chrUn_NW_020109926v1 409 121 + 3687 agtg------------ccccataagtgcctcat--ctgccccgtaagtgtccaactctgccccataagtggc-ccctgtgccccataagtgtcactcttttgccccataagtgcctca---tctgc-cccgtaagtgtct s cotJap2.chrUn_NW_015440561v1 1980 136 - 4764 AGTGCCCCCCTCgccaccccataagtgcccccttcctgccccataagtg-acagccAGGCCCAATAAGTAAC-AACTCTGCCCTATAAA-GCCCTCCCCTCACTCCATAAGTGCCCCGTtttctgc-cccataagtgaca i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3177 126 + 6027 AGTGAACCtcag----ccccataagtgaacTCT--CTGCCCCGTAAGTG-ACCCCTCAGCCCCATAAATGAA-CCTtcagccccataa--gtgaaccctctgccccataagtgagccc---tcagc-cccataagtgaac i melGal5.chrUn_NW_011216510v1 C 0 C 0 s araMac1.KE106114 2268 124 - 2728 AGCGTTTGCC------GCTTGTGTGTGCGT-----CTGCCCCATAAGTG-ATGCCCCAGCCCCATGAGTGACGCCCCCGGCCCTGTATGTGCCATT-TGGAGCCTCATAAGTAACCCT---TCTGAGCCCTCAAGTGCTC i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 1318 109 - 5278 I a score=-4428.000000 s galGal6.chrUn_NW_020109926v1 530 22 + 3687 catttgccccataagt-----------gtcact s cotJap2.chrUn_NW_015440561v1 2116 25 - 4764 gccctg-cccataaGTGA-------CGGCCCTT i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3303 32 + 6027 cttcagccccataagtgaaccCTC-AGATCCCT i melGal5.chrUn_NW_011216510v1 C 0 C 0 s araMac1.KE106114 2392 17 - 2728 CCTGTGCCCCATAAGT----------------T i araMac1.KE106114 C 0 C 0 s picPub1.KL216759 1427 19 - 5278 -----------CAAGTGACCCCAAGTGACC--- i picPub1.KL216759 I 109 I 81 a score=9851.000000 s galGal6.chrUn_NW_020109926v1 552 84 + 3687 --------ctgtgccccataagtgc---------cccataagtgcctcatctgccccataagtgccccatct---gccctataagtgtca-ctcttttgccccat s cotJap2.chrUn_NW_015440561v1 2141 93 - 4764 --------Caccgccccataagtga---cagcaGCCCATAagt-ccccccccaccccataagtgcACCCTTCCtaaccccataagtgacagccCCTGAGCCCCAT i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3335 98 + 6027 AAGTGAACCtcagccccataagtgaaccctctgccccataagt-gcctcTCAGCCCAGTAAGTGAACCTtca---gccccataagtga---accCTCTGCCCCAT i melGal5.chrUn_NW_011216510v1 C 0 C 0 s araMac1.KE106114 2409 82 - 2728 --------cccccccccAAGTGTGG---GGCTGCCCCATAAGT-TCAGGGCTGCCCCCTAAGTGCCCCGT-----GCCCCATAGA------GCTCTGTGGCGCCG i araMac1.KE106114 C 0 C 0 e picPub1.KL216759 1446 81 - 5278 I a score=-1660.000000 s galGal6.chrUn_NW_020109926v1 636 1 + 3687 -a s cotJap2.chrUn_NW_015440561v1 2234 1 - 4764 -A i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3433 1 + 6027 -A i melGal5.chrUn_NW_011216510v1 C 0 C 0 s araMac1.KE106114 2491 1 - 2728 -G i araMac1.KE106114 C 0 C 0 s picPub1.KL216759 1527 1 - 5278 C- i picPub1.KL216759 I 81 I 88 a score=4164.000000 s galGal6.chrUn_NW_020109926v1 637 59 + 3687 agtgc---------cccataagtgccccatctgccccataagtgt---ccctctgccccataagtggcccc s cotJap2.chrUn_NW_015440561v1 2235 68 - 4764 AGTGAAAACCCCTGACCATAagtgacagccctgccccataagtga---cgCCCAGGCCCAATAAGTACACC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3434 68 + 6027 AATGAACCTtcagccccataagtgaaccTTCAGCGCCATAAGTGA---ACCtcagccccataagtgaaccc i melGal5.chrUn_NW_011216510v1 C 0 C 0 s araMac1.KE106114 2492 71 - 2728 GTGGCTGCGGCTGGAGCAGACCCGGCCTTTCGGCCCCATAAGTGTGGGGCCGGGGCCGCGTGGGGCGCCCC i araMac1.KE106114 C 0 N 0 e picPub1.KL216759 1528 88 - 5278 I a score=1792.000000 s galGal6.chrUn_NW_020109926v1 696 19 + 3687 tgtgccccataagtgccac s cotJap2.chrUn_NW_015440561v1 2303 18 - 4764 TCTGACCCATGAA-GCACC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3502 19 + 6027 tctgccccataagtgaacc i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 1528 88 - 5278 I a score=546.000000 s galGal6.chrUn_NW_020109926v1 715 1 + 3687 t s cotJap2.chrUn_NW_015440561v1 2321 1 - 4764 T i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3521 1 + 6027 t i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 1616 1 - 5278 T i picPub1.KL216759 I 88 I 50 a score=600.000000 s galGal6.chrUn_NW_020109926v1 716 51 + 3687 ccgtgccccataagtgccccataagtgcctcatctgccccataaatactct s cotJap2.chrUn_NW_015440561v1 2322 43 - 4764 CCCCACTCCATA--------TCACGTCCCCCTTCCTGCCCATAAGTGACAG i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3522 38 + 6027 ca--gccccata-----------agtgagccctcagccccataagtgagac i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 1617 50 - 5278 I a score=600.000000 s galGal6.chrUn_NW_020109926v1 767 1 + 3687 c s cotJap2.chrUn_NW_015440561v1 2365 1 - 4764 C i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3560 1 + 6027 c i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 1667 1 - 5278 C i picPub1.KL216759 I 50 I 139 a score=5409.000000 s galGal6.chrUn_NW_020109926v1 768 124 + 3687 tgtgccccataagtgtcactccgtgccccataagtgcctcatctgccccatacgtgtccaactctgccccataagtgctccctgtgccccataagtgtcactttgtgccccataactg-------cccaat s cotJap2.chrUn_NW_015440561v1 2366 125 - 4764 ACTTGCCCATAAGTGACAGCCCTGCCCTCATAGTTAA--CATCCTGCCATAAtg---acagccctgccccataagtacAAGCCCTGACCCAT-AGAGTGACATcctgacccataagtgacagcCACCCAAT i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3561 122 + 6027 tctgccccataagtga-accttcagccccataagtgaaccTTCAGCGCCTTAAGTGAacc-ctctgccccataagtgagccctctgccccataagtgc--ctcTCAGCCCCATAAATG--AACC-TTCA-- i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 1668 139 - 5278 I a score=-829.000000 s galGal6.chrUn_NW_020109926v1 892 1 + 3687 -a s cotJap2.chrUn_NW_015440561v1 2491 1 - 4764 -A i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s picPub1.KL216759 1807 1 - 5278 C- i picPub1.KL216759 I 139 I 49 e melGal5.chrUn_NW_011216510v1 3683 0 + 6027 C a score=-190.000000 s galGal6.chrUn_NW_020109926v1 893 32 + 3687 agtgcccca---taagcg------cct--cataag---------tggcccca s cotJap2.chrUn_NW_015440561v1 2492 52 - 4764 AGTGACCCGACCTAAGTGAACAGCCCTGCCATAATGACCAGCCCTGCCCCCA i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3683 26 + 6027 ---GCCCCA---GAAGTGAac---cct-----------------ctgcccca i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 1808 49 - 5278 I a score=828.000000 s galGal6.chrUn_NW_020109926v1 925 5 + 3687 taagt s cotJap2.chrUn_NW_015440561v1 2544 4 - 4764 TAA-T i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3709 5 + 6027 taagt i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 1857 5 - 5278 CAAGT i picPub1.KL216759 I 49 I 83 a score=6406.000000 s galGal6.chrUn_NW_020109926v1 930 74 + 3687 gt---ccctctgccccataagtgccccccg------------tgtcccataagtgtcactccgtgccccataagtgccccccgtgcccc s cotJap2.chrUn_NW_015440561v1 2548 89 - 4764 GTACGCCTTCCGCCCCATAAGTCCCTCCCATAGTGCTTATCCTGCCACATAAGTGACAGCCCGGACCCTATAAGTGAAAACCCCGCCCC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3714 74 + 6027 gaa--cccTCAGACCCATAAGTGAACCCTC------------AGCCCCATAAATGA-ACCTtcagccccataagtgaaccctctgcccc i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 1862 83 - 5278 I a score=546.000000 s galGal6.chrUn_NW_020109926v1 1004 1 + 3687 a s cotJap2.chrUn_NW_015440561v1 2637 1 - 4764 A i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3788 1 + 6027 a i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 1945 1 - 5278 A i picPub1.KL216759 I 83 I 32 a score=2867.000000 s galGal6.chrUn_NW_020109926v1 1005 44 + 3687 taagtgcctcataagtgccccataag-tgtccaactctgccccat s cotJap2.chrUn_NW_015440561v1 2638 45 - 4764 TAAGTGATCAACCCTGCCCCCATAAGATGCCCCCTCCTGCACCAT i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3789 41 + 6027 taagtgagccctc--tgccccataag-tgagc-CCTCTGCCCCAT i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 1946 32 - 5278 I a score=546.000000 s galGal6.chrUn_NW_020109926v1 1049 1 + 3687 a s cotJap2.chrUn_NW_015440561v1 2683 1 - 4764 A i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3830 1 + 6027 A i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 1978 1 - 5278 A i picPub1.KL216759 I 32 I 9 a score=405.000000 s galGal6.chrUn_NW_020109926v1 1050 9 + 3687 agtgtggct s cotJap2.chrUn_NW_015440561v1 2684 9 - 4764 AGTGCCTCC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3831 9 + 6027 AATGAACCT i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 1979 9 - 5278 I a score=-1940.000000 s galGal6.chrUn_NW_020109926v1 1059 3 + 3687 ccg- s cotJap2.chrUn_NW_015440561v1 2693 3 - 4764 TAC- i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3840 3 + 6027 tca- i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 1988 3 - 5278 -AAG i picPub1.KL216759 I 9 I 50 a score=2998.000000 s galGal6.chrUn_NW_020109926v1 1062 43 + 3687 tgccccataagtgccccccgtgccccataagtgcctcataagt s cotJap2.chrUn_NW_015440561v1 2696 42 - 4764 TTCCCCATATGTGTCTCCCTGGCCCCATAAGTactccctcc-t i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3843 39 + 6027 -gccccataagtgaaccTC-AGACCCATAAGCAAaccctc--t i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 1991 50 - 5278 I a score=600.000000 s galGal6.chrUn_NW_020109926v1 1105 1 + 3687 g s cotJap2.chrUn_NW_015440561v1 2738 1 - 4764 g i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3882 1 + 6027 g i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 2041 1 - 5278 G i picPub1.KL216759 I 50 I 45 a score=4829.000000 s galGal6.chrUn_NW_020109926v1 1106 48 + 3687 ccccataagtgtcctactctgccccataagtgtggctccgtgccccat s cotJap2.chrUn_NW_015440561v1 2739 47 - 4764 ccccataagtg-acagccCTGCACCATAAGTGACCCCTTCCTCCCCAT i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3883 46 + 6027 ccccataagtg-aacgCTCAGCTCCGTAAGT-CCAtcctctgccccat i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 2042 45 - 5278 I a score=-1107.000000 s galGal6.chrUn_NW_020109926v1 1154 1 + 3687 -a s cotJap2.chrUn_NW_015440561v1 2786 1 - 4764 -A i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3929 1 + 6027 -a i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 2087 1 - 5278 C- i picPub1.KL216759 I 45 I 88 a score=6760.000000 s galGal6.chrUn_NW_020109926v1 1155 99 + 3687 agtgccccccgtgccccataagt----gcccagctctgccccgtaagtg---ccctccgtgccccac-cagtgccccctgtgccccataagtgcc---------ccacaagtg--ccc s cotJap2.chrUn_NW_015440561v1 2787 115 - 4764 AGTGACAGCCCTG-ACCATAAGTGGCCGCCCCgccccaccccataagtgccacCTTCCCTACCCCATACAGTGACAGCACTG-CCCATAAGTGACAGCCGTG-ACCATAAGTGAAACC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 3930 107 + 6027 agtgaacccTCTGCCCCAAAGG-----GCCC--CTCTACCCCATAAGTG---CATCCTCTGCCCCAT-AACTGAgccctctgccccataagtgaaccctctgccccataagtgaaccc i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 2088 88 - 5278 I a score=-69.000000 s galGal6.chrUn_NW_020109926v1 1254 1 + 3687 t s cotJap2.chrUn_NW_015440561v1 2902 1 - 4764 G i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4037 1 + 6027 t i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 2176 1 - 5278 T i picPub1.KL216759 I 88 I 105 a score=6146.000000 s galGal6.chrUn_NW_020109926v1 1255 77 + 3687 ttgagccccataagtgccccccgtgtcccataagtgtcactccgtgccccataaatg---ccccatctgccccataagtg----------- s cotJap2.chrUn_NW_015440561v1 2903 91 - 4764 CTGACCCTCATAagtgacagccctgccccataagtgacaggCACTGCCGCATAAGTTGACAGCCACTGACCCGATAAGTACAGCCCTCGAC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4038 73 + 6027 ctg--ccccataagtgcatCCTCTGCGCCATAAGTGCCCCTCA--GCCCCATAAGTG---CGtcctctgccccataagtg----------- i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 2177 105 - 5278 I a score=-1050.000000 s galGal6.chrUn_NW_020109926v1 1332 2 + 3687 gg- s cotJap2.chrUn_NW_015440561v1 2994 2 - 4764 CG- i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4111 2 + 6027 ag- i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 2282 2 - 5278 -GA i picPub1.KL216759 I 105 I 32 a score=573.000000 s galGal6.chrUn_NW_020109926v1 1334 32 + 3687 caatg-------tgccccat-aagt----------gcctcataagtg-----cct s cotJap2.chrUn_NW_015440561v1 2996 55 - 4764 AagtgacagccctgccccatcAAGTGACTAGCCAGGCCCCATAAGTGAAAACCCT i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4113 40 + 6027 cCCTC-------AGCCCCAT-AAGTGCATCCTTT-GCCCCATAAGTG------CT i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 2284 32 - 5278 I a score=-326.000000 s galGal6.chrUn_NW_020109926v1 1366 1 + 3687 c s cotJap2.chrUn_NW_015440561v1 3051 1 - 4764 G i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4153 1 + 6027 C i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 2316 1 - 5278 T i picPub1.KL216759 I 32 I 147 a score=13480.000000 s galGal6.chrUn_NW_020109926v1 1367 157 + 3687 a--------------tctgc-cccataagtgtccaactctgccccataagtggcccctgtgcc-ccataagtgtcactccgtgccccataagtgcgccatctgccccataagtgtccaactctgcc-ccataagtgccccat--ctgccccataagtgctccctgtgccccataag s cotJap2.chrUn_NW_015440561v1 3052 171 - 4764 ACCATAAAGTGAAGCCCTGCGCCCATAAGTGACAGACcctgacccataagtgacagcCCTGCCTCCTTAagtgacagccc-tgccccataagtgagcagcctgccccataagtgac--agccTGCCGCCATAAGATgaccagcactgccccat-agtgaaacctg-accccataag i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4154 151 + 6027 C--------------CCAGC-CCCATAAGT-ACACACtcagccccataagtgaaccTTCAGCC-CCGTAAGTGA-ACCTC-AGACCCATAAGTGAAtcctctgccccataagtgcc--tcTCAGCC-CCATAAATGAACCTt--cagccccataagtgaaccTCA-GACCCATAAG i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 2317 147 - 5278 I a score=-3000.000000 s galGal6.chrUn_NW_020109926v1 1524 10 + 3687 tgtcactttg-- s cotJap2.chrUn_NW_015440561v1 3223 10 - 4764 tgacagccCT-- i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4305 9 + 6027 CAA-accctc-- i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 2464 6 - 5278 ------tcccag i picPub1.KL216759 I 147 I 186 a score=9770.000000 s galGal6.chrUn_NW_020109926v1 1534 195 + 3687 tgccccataagtgc---------cccataagtgtccaac--tctaccccataagtgtggctccgtgccccataagtgccccacaagtg-ccccctgtgccccataagtgcctcatctgccccataagtgtcgctccgtgccccataagtgc---------cccataagtgtccctctgccccataagtg-------tcccctgtg---ccccataagtt-tcgctcc s cotJap2.chrUn_NW_015440561v1 3233 212 - 4764 GCCACCATAAGTGACAGC-CAGGCCCATAAGTATACTACCGTCTGCCCCATAAAGAGCCCT-----CCCCAT-------CCATAAGTGACCCTTTCTGCCCCAACACTGACAACTCTGCCCAGACGTTGACAGCCCGGACCGCATaagtgacagccctg-cccataaGTGACAGCCTG-CCCATAATTGGAAAACTTACCATACGACCCACCATAAGTGAGCAGTCC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4314 197 + 6027 tgccccataagtgaacgCTCAGCTCCGTAAGT---CCAtcctctgccccataagtgaacc------cTCTGC-------CCCAAAGGG--CCCCTCTACCCCATAAGTGCATCCTCTGCCCCATAAAT-ACaccctctgccccataagtgaaccctctgccccataagtgcctcTCAGCCCCATAAATG-------AACCTtcag---ccccataagtg-cccctCT i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 2470 186 - 5278 I a score=-1925.000000 s galGal6.chrUn_NW_020109926v1 1729 3 + 3687 -gtg s cotJap2.chrUn_NW_015440561v1 3445 3 - 4764 -TGA i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4511 2 + 6027 -GG- i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 2656 3 - 5278 GGG- i picPub1.KL216759 I 186 I 36 a score=1142.000000 s galGal6.chrUn_NW_020109926v1 1732 39 + 3687 tcccataagtgccccataagtgtccaactctgccccgta s cotJap2.chrUn_NW_015440561v1 3448 39 - 4764 ACCCATAATTGACACCTGCCTAACTAACCCTCTACCTAA i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4513 26 + 6027 -CCCATAAGCAAacc------------ctctgccccata i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 2659 36 - 5278 I a score=-469.000000 s galGal6.chrUn_NW_020109926v1 1771 6 + 3687 agtgcc s cotJap2.chrUn_NW_015440561v1 3487 6 - 4764 TACATC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4539 6 + 6027 agtgaa i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 2695 6 - 5278 AGAGAC i picPub1.KL216759 I 36 I 11 a score=-150.000000 s galGal6.chrUn_NW_020109926v1 1777 1 + 3687 c s cotJap2.chrUn_NW_015440561v1 3493 1 - 4764 G i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4545 1 + 6027 c i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 2701 11 - 5278 I a score=-40.000000 s galGal6.chrUn_NW_020109926v1 1778 7 + 3687 cccgagc- s cotJap2.chrUn_NW_015440561v1 3494 7 - 4764 CCCTGGC- i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4546 7 + 6027 aCTCAGC- i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 2712 7 - 5278 -cccagtg i picPub1.KL216759 I 11 I 27 a score=1548.000000 s galGal6.chrUn_NW_020109926v1 1785 27 + 3687 cccataagtg-----------ccccataagtgccccct s cotJap2.chrUn_NW_015440561v1 3501 37 - 4764 CCCATAAGTGAAAACCTCTGCCCCAATAAGTGACAGC- i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4553 36 + 6027 TCCGTAAGTC-CAtcctctg-ccccataagtgaacctt i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 2719 27 - 5278 I a score=-1355.000000 s galGal6.chrUn_NW_020109926v1 1812 2 + 3687 ga- s cotJap2.chrUn_NW_015440561v1 3538 1 - 4764 -A- i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4589 2 + 6027 ca- i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 2746 2 - 5278 -gt i picPub1.KL216759 I 27 I 28 a score=1659.000000 s galGal6.chrUn_NW_020109926v1 1814 28 + 3687 gccccataag---------cgccccataagtgtccaa s cotJap2.chrUn_NW_015440561v1 3539 33 - 4764 GGCCCATAAT--ACACGTCTGCCCCATAA--GACCCT i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4591 35 + 6027 gccccataagtgaaccctctgccccacaa--gtgccc i melGal5.chrUn_NW_011216510v1 C 0 C 0 e picPub1.KL216759 2748 28 - 5278 I a score=791.000000 s galGal6.chrUn_NW_020109926v1 1842 8 + 3687 ctctgccc s cotJap2.chrUn_NW_015440561v1 3572 8 - 4764 CCCCACTC i cotJap2.chrUn_NW_015440561v1 C 0 C 0 s melGal5.chrUn_NW_011216510v1 4626 8 + 6027 cTCTACCC i melGal5.chrUn_NW_011216510v1 C 0 C 0 s picPub1.KL216759 2776 8 - 5278 CTATGGGT i picPub1.KL216759 I 28 N 0 a score=38303.000000 s galGal6.chrUn_NW_020109926v1 1850 1155 + 3687 cacaagtgccccctg--tgccccataagtgtcactttgtaccccataagtgccccat--ctgcccaataagtgtctcatctgccccataagtgtcgctctgtg-------------ccccataagt---gcccc--------ataagtgt-------ccaactctgccccataagtgtggct-------------ccgtgccccataagt---gccccacaagtgccccctgtgccccat-aagtg---tggctccg-------------tgcca-cataagt---gccccacaagtgccccctgtgccccataagtgtcactttgtaccccataagtgccccatctgccccataagtgtctcatctg--ccccataagtgtcgctctgt-------gccccataag-----------tgccccacaagtgccccctgtgcc-ccataagtgtggctccgtgc-cccataagtgc------cccacaagtgcctcataagtgcctcatctgccccataagtgtcgctccgtgccccgtaagtgccccctgtccccataagtgtc-gctccatgccccataagtgccccataagtgccccattagtgtcca----------actctgccccataagtgcccccgtgccccataagtgtcactttgt-------------gccccataag--------tgccccataagtgcctcatctgccccataagtgtggctccgtgccccataagtgc---cccacaagtgc---cccctgtgccccataag-tgtggctccgtgccccataagt---gccccacaagtgccccctg--tgccccataagtgcctcatctgccccataagtgtcgcgccgtgccccgtaagtgcccgctgtgccccataagtgtggctccgtgtcccataagtgccccctgtgc---cccataagtgtg-gctccgtgccccataagtgtccaactctgccccataagtgccccccctgccccataagtgtggctccgt-------gc--cccataagtgccccccgtgccccat-aagtgtccaactctgccccgtaagtgccctccgtgccccaccagtgccccctgtgccccataagtg----------ccccacaagtgc-cctttgagccccataagtgccccccgtgtcccataagtgtcactccgtgccccataaatgccccatctgccccataagtgtcactccgtgccccataagtg--------cctcataagtgcctcat--cttccccataagtgtccaactctgccccataagtgccccctgtgccccataagtgtca s cotJap2.chrUn_NW_015440561v1 3580 1184 - 4764 CATAAGTGCCCCCtttctgccccataagtgacaa-ccgtgccccataagtgaccccttcctgccccataagtgcaaACCTtgacccataagtgacagcCAGGG--------------CCCATAAGT---GACACCTCTGCAAATAAGTG--------ACACCTCTGCCACATCAGTCCCGTTGT---------GCTGGTGTCTCGT--------CCCTAGCAGCGGTTGAGGATTCCCACGGAGTGTAATGGTACCA-------------AACCCTCCTTCCT---GCCCGAGAAGGACAGCCCTCGACCCATATATGACAGCCTAtgacccataagtgacagcCCTG-ACCATAAGTGACAGCCCTGAACCCCATAAGTGTAA-------------GCCCGACATGATGACAGCCctcgccccataagtgacaccCCTGCCACCATAATTAATACACCTCCTGCCCATCTATACTGCAGACCCTGACCAGCAACATAAGTGC--CACCCCACCCATAAAGTGCCCCCttcgccccataagtgacagcaGGCCCCATAAGTAACAACTCTCTGCCCCATGAGAGTGCCGCTCCCACTCGCATAATGCCCC----------TTTCTG-CCCATAAGTGACAGCCTGCCCAATAAA-GTGacaccct-------------gccccataagttGAAACCTGACCGATAAGTAGCAGCCCTGGCCCATAA-TGAACAGCCAGGCCCCATTAA---------GTAAGCAC---CTC---TGCCACATAAGTTGCCTCCCCCCACTCCATA-------------AAGTGCCCCTTTTCTGCCCCA-AAGTGACAGCCCTGTCCATCAGCTGacccctcctgccccataagtgcaaACTTGACCCACTAAGTG-AAAGCCAGGCCCCATAAGTGGCCCCCTTTCCTGCCCATAAGTGAACAGCCCAGGCCCCATAAGTAACAACCTCTG-CCCATAAGAGCCCTCCCACCTCCAGTAAGTTGCCCCCTT-------TCTGCCCATAagtgacagccctgccccatcAAGTGACACCCCCTGCACCAAAGTGAAACCCCTCGCCGCAGAAAGtacagccctgccccataagtgacagccTGAACCCATCAAGTGCACCCTTCCTACCCATAAGTGACAACCCTG-CCCATAAGTA--AATCCTGCCCCAGTAAGTGACCCCT-TCTCCCATATGTGACAGCC--TGACCCATTAAcgtgcccccaccccataagtgcACCCTTCCTaccccataagtg-acagccAGGCCAt---agtgccccccac-cccattaagTGCCA i cotJap2.chrUn_NW_015440561v1 C 0 N 0 s melGal5.chrUn_NW_011216510v1 4634 1150 + 6027 CATAAGTGCATCCTC--TGCCCCATAAATG-CACCCTCTGCCCCATAACCGAaccct--ctgccccataagtgcc-ctCCAGACCCATAACTGCAGCCCCATAAATACAATCCCAGCCCCATAAGTCCAGCCCC--------ACAAGTCCGGCCCCATAAGCTCAGCCCCATAAATACAATCCTTTAAATACAATCCCAGCCCCATAAGTCCAGCCCCATAAGTGC------AGCCCCAC-AACTA---CAACCCCATAAATACAACCCCAGCCC-CATAAGTCCAGCCCCATAAGTGCTCCACA-GCCCCATAAGTACAAT-------CCCATAAATACAAACCCAGCCCCATAAGT------CCAG--CCCCATAAGTGCAGCCCCACAACTACAACCCCATAAA--TACAAAcccagccccataagtgcctCCCA-GCC-CCATAACTGCAGC--------CCCATAAGTGC------TCCACA---GCCCCTTAAGTAC--AAC----CCCATAAA-TACAAAcccagccccataagtgcctCCCAGCCCCATAAGT--------CCAGCCCCATAAGTGCTCCACAgccccttaagtacaaccccataaatacaaacccagccccataagtgccccccagccccataagtacaatcccataaatacaaacccagccccataag-----tgcagccccttaagtgtc-ccccagccccataaatacaatccca-gccccaCAAGTACAATCCCTTAAATACAAACCC---AGCCCCACAAT-TACA-------GCCCCATAAGTGCAGCCCCACAAGTGCCCCC----AGCTCCATAAGTA------CAACCCCATAAAT-ACAATCCCAGCCCCATAAGTACCC-TTTAGCCCCATAAGTG-------CAGCCCCATAAGTACAAT---------CCCATAAGTACA-ATCCCA-GCCCCACAAGT-------CCAGTCCCATAAATACAatcccagccccataagtgCAGCCCCATAAGTCCAGC--CCCATAAATACAatcccagccccat-aagtgcc--ctTCAGCCCCATAAGT------CCAGCCCCATAAGTACAATCCCAGCCCCATAAGTC-------CAGCCCCATAAACAC-AatcccagccccataagtgCAGC------CCCATAAGT-------CCAGCCCCTTAAATATAatcccagccccataagtgccctTC--AGCCCCATAAGTG-----CAGCCCCATAAGTACAATCC--CAGCCCCACAAGTC-------CAGTCCCATAAATACAATCCCAGCCCCATAAGT---- i melGal5.chrUn_NW_011216510v1 C 0 C 0 a score=641.000000 s galGal6.chrUn_NW_020109926v1 3005 63 + 3687 ctttgtgccccataagtgccccataagtgtccaactctgccccataagtgtggctcctgcccc s melGal5.chrUn_NW_011216510v1 5784 42 + 6027 ---------CCA-----GTCCAATAAATA-CAATCCCAGCCCCATAAG------TCCAGCCCC i melGal5.chrUn_NW_011216510v1 C 0 C 0 a score=546.000000 s galGal6.chrUn_NW_020109926v1 3068 2 + 3687 at s melGal5.chrUn_NW_011216510v1 5826 2 + 6027 AT i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01032958 983 2 + 2141 AT i cucCan1.JNOX01032958 N 0 I 13 a score=631.000000 s galGal6.chrUn_NW_020109926v1 3070 14 + 3687 aagt---gccccacaag s melGal5.chrUn_NW_011216510v1 5828 17 + 6027 AAGTGCAGCCCCACAAC i melGal5.chrUn_NW_011216510v1 C 0 C 0 e cucCan1.JNOX01032958 985 13 + 2141 I a score=273.000000 s galGal6.chrUn_NW_020109926v1 3084 1 + 3687 t s melGal5.chrUn_NW_011216510v1 5845 1 + 6027 T i melGal5.chrUn_NW_011216510v1 C 0 C 0 s cucCan1.JNOX01032958 998 1 + 2141 T i cucCan1.JNOX01032958 I 13 I 206 a score=4752.000000 s galGal6.chrUn_NW_020109926v1 3085 195 + 3687 gccccccgtgccccataagtgacgctccgtgccccataagtgccccataagtgccccataagcgtccaactctgccccataagtgccccctgtgccccataagtgtggctccgt-------gccccataagtgccccccgtgccccataagtgtcactttgtgccccataagt---gccccacaagtgccccctgtgccccataa s melGal5.chrUn_NW_011216510v1 5846 181 + 6027 ACA------ATCTCATAAAT-ACAAccccagccccataagtgccctcca---gccccataagtg-------cagccccataaatacaatcccagccccataagtgCAGCCCCACAACTACAATCCCATAAATACAatcccagccccataagtgcc-------GCCCCATAACTGCAGCCCCATAAACGCAATCCCAGCCCCATAA i melGal5.chrUn_NW_011216510v1 C 0 N 0 e cucCan1.JNOX01032958 999 206 + 2141 I a score=1432.000000 s galGal6.chrUn_NW_020109926v1 3280 41 + 3687 gtgtggctccgtgccacataagtgccccacaagtgcc--cctg s melGal5.chrUn_NW_011210931v1 160 42 + 669 GT-CACCTCTgggccccataagtgccccataaaTGTCATTctg i melGal5.chrUn_NW_011210931v1 N 0 C 0 e cucCan1.JNOX01032958 999 206 + 2141 I a score=29.000000 s galGal6.chrUn_NW_020109926v1 3321 1 + 3687 t s melGal5.chrUn_NW_011210931v1 202 1 + 669 t i melGal5.chrUn_NW_011210931v1 C 0 C 0 s cucCan1.JNOX01032958 1205 1 + 2141 C i cucCan1.JNOX01032958 I 206 I 324 a score=11544.000000 s galGal6.chrUn_NW_020109926v1 3322 324 + 3687 gccccataagtgtcactttgtaccccataagtgccccatctgccccataagtgt-ctcatctgccc-ataagtgtcgctctgtgccccataagtgccccctgtgccccataagtgtggctccgtgccccataagtgccccacaagtgccccataagtg-cctcatctgcccataactgtcgctccgtgccccgtaagtg-cccctgt-ccccataagtgtcgctccgtgccccataagtgcctcataagtgcccATTAGTGTCCAACTCTGCCC-ATAAGTGCCCCCTGGCCCCATAATGTCACTTGTgcccataagtgccccataagtg s melGal5.chrUn_NW_011210931v1 203 319 + 669 gccccataagtgtgtcctgctgccccataagtgacctCTGGGCCCCATAAGTGTGTTCttctgccccataagtgtgtCCTTttgccccataagtgacccctGGGCCCCATAAGTGTGTctgc-tgccccataagtgacccct--GGGCCCCATAAGTGACCTCTGGGCCCCACAAGTGCCCAACTCTGCCCCATAAGCGGCCTctgtgccccataagtgtgtccttctgccccataagtgacctCTGGGC-CCCTTAAGTGTGACCTGCTGCCCCATAAGTCACCTCTGGGCCCCTTAAGTGTGTCctgc-------tgccccataagtg i melGal5.chrUn_NW_011210931v1 C 0 C 0 e cucCan1.JNOX01032958 1206 324 + 2141 I a score=-951.000000 s galGal6.chrUn_NW_020109926v1 3646 1 + 3687 -c s melGal5.chrUn_NW_011210931v1 522 1 + 669 -t i melGal5.chrUn_NW_011210931v1 C 0 C 0 s cucCan1.JNOX01032958 1530 1 + 2141 A- i cucCan1.JNOX01032958 I 324 N 0 a score=1959.000000 s galGal6.chrUn_NW_020109926v1 3647 40 + 3687 ctcAT-CTGCCCCATAAGGTGGCTCCGTGCCCCATAAGTGT s melGal5.chrUn_NW_011210931v1 523 41 + 669 gtCCTGCTGCCCCATAAGTCACCTCTGGGCCCCATAAGTGT i melGal5.chrUn_NW_011210931v1 C 0 N 0