##maf version=1 scoring=roast.v3.3 a score=91.000000 s galGal6.chrUn_NW_020110065v1 300 1 + 13513 a s melGal5.chrUn_NW_011234257v1 633 1 + 634 a i melGal5.chrUn_NW_011234257v1 N 0 N 0 a score=100.000000 s galGal6.chrUn_NW_020110065v1 4163 1 + 13513 G s angJap1.KI319851 19806 1 + 26375 g i angJap1.KI319851 N 0 C 0 a score=1939.000000 s galGal6.chrUn_NW_020110065v1 4164 19 + 13513 ----AGGGAacagaggagaactc s oreNil3.chrLG11 11609777 19 + 36466354 ----AGACAACAGTAAAGGCAGC i oreNil3.chrLG11 N 0 C 0 s mayZeb1.JH720519 1488533 19 - 6722756 ----AGACAACAGTAAAGGCAGC i mayZeb1.JH720519 N 0 C 0 s angJap1.KI319851 19807 23 + 26375 ggggaggggaccAGAGCGCCCCC i angJap1.KI319851 C 0 C 0 a score=-657.000000 s galGal6.chrUn_NW_020110065v1 4183 13 + 13513 ----cacctgtactccc s pelCri1.KK492659 2715 13 + 126815 ----CACAGTTACTCCA i pelCri1.KK492659 N 0 I 54 s oreNil3.chrLG11 11609796 14 + 36466354 CGCTTACAGGTCCC--- i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488552 14 - 6722756 CGCTTACAGGTCCC--- i mayZeb1.JH720519 C 0 C 0 s angJap1.KI319851 19830 14 + 26375 CATTTTCCGGCGCC--- i angJap1.KI319851 C 0 C 0 a score=-1240.000000 s galGal6.chrUn_NW_020110065v1 4196 16 + 13513 actctgcccactgacc s oreNil3.chrLG11 11609810 8 + 36466354 TTTCTG--------TC i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488566 8 - 6722756 TTTCTG--------TC i mayZeb1.JH720519 C 0 C 0 s angJap1.KI319851 19844 8 + 26375 GCGCAG--------CG i angJap1.KI319851 C 0 C 0 e pelCri1.KK492659 2728 54 + 126815 I a score=-9344.000000 s galGal6.chrUn_NW_020110065v1 4212 41 + 13513 accccag--tgccc--------tgaacaccctttg--cat---ggccctca----ggctt s oreNil3.chrLG11 11609818 49 + 36466354 AGCTCAGATAGCAT--------TGATCTCCTCTTGCGTGT---GTTCCTTATCTTGTGCA i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488574 49 - 6722756 AGCTCAGATAGCAT--------TGATCTCCTCTTGTGTGT---GTTCCTTATCTTGTGCA i mayZeb1.JH720519 C 0 C 0 s angJap1.KI319851 19852 24 + 26375 GCCTCAG----------------GACGTCTCGTTG--------------------GAGCA i angJap1.KI319851 C 0 C 0 s petMar3.PIZI01000069v1 1337503 49 - 3145599 AACGCAG-TAGCATGTACACTGTAATATTACAACGGCCGTAAAGAATCTT---------- i petMar3.PIZI01000069v1 N 0 C 0 e pelCri1.KK492659 2728 54 + 126815 I a score=-406.000000 s galGal6.chrUn_NW_020110065v1 4253 3 + 13513 ctc s pelCri1.KK492659 2782 3 + 126815 AAA i pelCri1.KK492659 I 54 I 71 s oreNil3.chrLG11 11609867 3 + 36466354 GTC i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488623 3 - 6722756 GTC i mayZeb1.JH720519 C 0 C 0 s angJap1.KI319851 19876 1 + 26375 --C i angJap1.KI319851 C 0 C 0 s petMar3.PIZI01000069v1 1337552 3 - 3145599 CTC i petMar3.PIZI01000069v1 C 0 C 0 a score=4442.000000 s galGal6.chrUn_NW_020110065v1 4256 23 + 13513 tcagtgactccCTCTGCCAACAC s oreNil3.chrLG11 11609870 23 + 36466354 TTGGTAATTCCCCCGCACAAGGC i oreNil3.chrLG11 C 0 I 22 s mayZeb1.JH720519 1488626 23 - 6722756 TTGGTAATTCCCCCGCACAAGGC i mayZeb1.JH720519 C 0 I 22 s angJap1.KI319851 19877 23 + 26375 TGGGTGCTCTCCTCGGTGGCGGT i angJap1.KI319851 C 0 I 6 s petMar3.PIZI01000069v1 1337555 23 - 3145599 TCTTTGACTTCAccgacggagac i petMar3.PIZI01000069v1 C 0 C 0 e pelCri1.KK492659 2785 71 + 126815 I a score=-12706.000000 s galGal6.chrUn_NW_020110065v1 4279 34 + 13513 -----CAACCACAAAAA------CCACACGTTGTAACAC--------------------AAACTG----------- s tetNig2.chrUn_random 24479842 25 + 107808587 -----CACCCACCAAAA------CGAC---ATCTGAACC------------------------------------- i tetNig2.chrUn_random N 0 C 0 s oreNil3.chrLG11 11609915 25 + 36466354 -----CACCTCTGGAGA------CGGC---TTTTAACCC------------------------------------- i oreNil3.chrLG11 I 22 C 0 s mayZeb1.JH720519 1488671 25 - 6722756 -----CACCTCTGGAGA------CGGC---TTTTAACCC------------------------------------- i mayZeb1.JH720519 I 22 C 0 s angJap1.KI319851 19906 51 + 26375 -----CACGTGGGGGTAGCAGCGCGCC---TTGTCCCCCGCGCAGGACGGGCGGAGCTG----------------- i angJap1.KI319851 I 6 I 11 s petMar3.PIZI01000069v1 1337578 41 - 3145599 agagacaatgaCACGGA------CTCC---TTGCGCCGA--------------------------AACGCAGCTGA i petMar3.PIZI01000069v1 C 0 C 0 e pelCri1.KK492659 2785 71 + 126815 I a score=-3935.000000 s galGal6.chrUn_NW_020110065v1 4313 22 + 13513 -----CCCTCACCACCCCACTGA--CCGC s tetNig2.chrUn_random 24479867 22 + 107808587 -----CTTTCATCATAGAACCAA--CAGT i tetNig2.chrUn_random C 0 I 1 s oreNil3.chrLG11 11609940 22 + 36466354 -----CTTCCATCACACTACCCA--CAGT i oreNil3.chrLG11 C 0 I 1 s mayZeb1.JH720519 1488696 22 - 6722756 -----CTTCCATCACACTACTCA--CATT i mayZeb1.JH720519 C 0 I 1 s angJap1.KI319851 19968 24 + 26375 -----CCCGCAGGACGCTCCTCAGCATGG i angJap1.KI319851 I 11 I 2 s danRer11.chr19 10611893 22 + 48449771 -----CCATCAACACATGCTTTG--ATGG i danRer11.chr19 N 0 I 2 s petMar3.PIZI01000069v1 1337619 27 - 3145599 GAAGCAGCAGAGAAGGCTGCGGA--CCTT i petMar3.PIZI01000069v1 C 0 C 0 e pelCri1.KK492659 2785 71 + 126815 I a score=-921.000000 s galGal6.chrUn_NW_020110065v1 4335 3 + 13513 CCT-- s thaSir1.NW_013658552v1 419471 3 + 511692 CTC-- i thaSir1.NW_013658552v1 N 0 C 0 s anoCar2.chrUn_GL343281 1363731 3 - 1799426 CTT-- i anoCar2.chrUn_GL343281 N 0 C 0 s tetNig2.chrUn_random 24479890 3 + 107808587 CCT-- i tetNig2.chrUn_random I 1 C 0 s oreNil3.chrLG11 11609963 3 + 36466354 CCT-- i oreNil3.chrLG11 I 1 C 0 s mayZeb1.JH720519 1488719 3 - 6722756 ACT-- i mayZeb1.JH720519 I 1 C 0 s gasAcu1.chrX 2121828 3 + 15657440 CTT-- i gasAcu1.chrX N 0 C 0 s danRer11.chr19 10611917 3 + 48449771 CTG-- i danRer11.chr19 I 2 C 0 s petMar3.PIZI01000069v1 1337646 4 - 3145599 -CTGT i petMar3.PIZI01000069v1 C 0 C 0 e pelCri1.KK492659 2785 71 + 126815 I e angJap1.KI319851 19992 2 + 26375 I a score=9742.000000 s galGal6.chrUn_NW_020110065v1 4338 10 + 13513 CGCacagcac s thaSir1.NW_013658552v1 419474 10 + 511692 CGGatggtgg i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363734 10 - 1799426 TGGATGGCAG i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479893 10 + 107808587 CTCACAGCTG i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11609966 10 + 36466354 CTCACAGCAG i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488722 10 - 6722756 Ctcacagcag i mayZeb1.JH720519 C 0 C 0 s gasAcu1.chrX 2121831 10 + 15657440 CTGACAGCCG i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 19994 10 + 26375 CGCACCGCCG i angJap1.KI319851 I 2 C 0 s danRer11.chr19 10611920 10 + 48449771 CGAACCGCTG i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337650 1 - 3145599 ---------C i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257094 10 - 2114266 CGCACGGCCC i letCam1.KE993770 N 0 C 0 e pelCri1.KK492659 2785 71 + 126815 I a score=-2243.000000 s galGal6.chrUn_NW_020110065v1 4348 2 + 13513 tg s pelCri1.KK492659 2856 2 + 126815 TT i pelCri1.KK492659 I 71 C 0 s thaSir1.NW_013658552v1 419484 2 + 511692 ag i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363744 2 - 1799426 TG i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479903 2 + 107808587 AG i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11609976 2 + 36466354 AG i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488732 2 - 6722756 ag i mayZeb1.JH720519 C 0 C 0 s gasAcu1.chrX 2121841 2 + 15657440 CC i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20004 2 + 26375 AG i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10611930 2 + 48449771 CC i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337651 2 - 3145599 TG i petMar3.PIZI01000069v1 C 0 I 9 s letCam1.KE993770 257104 2 - 2114266 TG i letCam1.KE993770 C 0 I 12 a score=20255.000000 s galGal6.chrUn_NW_020110065v1 4350 5 + 13513 gagga s pelCri1.KK492659 2858 5 + 126815 AAGTA i pelCri1.KK492659 C 0 I 7 s thaSir1.NW_013658552v1 419486 5 + 511692 gaaga i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363746 5 - 1799426 GAGGA i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479905 5 + 107808587 GAAGA i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11609978 5 + 36466354 GAAGA i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488734 5 - 6722756 gaaga i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680816 5 - 29412213 GAGGA i oryLat2.chr11 N 0 C 0 s gasAcu1.chrX 2121843 5 + 15657440 GAGGA i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20006 5 + 26375 GAGGA i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10611932 5 + 48449771 GAGGA i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337662 5 - 3145599 GAGAC i petMar3.PIZI01000069v1 I 9 C 0 s letCam1.KE993770 257118 5 - 2114266 GAGCT i letCam1.KE993770 I 12 C 0 a score=22653.000000 s galGal6.chrUn_NW_020110065v1 4355 7 + 13513 gaaatag s thaSir1.NW_013658552v1 419491 7 + 511692 gaagaag i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363751 7 - 1799426 GAAGTAG i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479910 7 + 107808587 CATGTAA i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11609983 7 + 36466354 AAAGTAG i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488739 7 - 6722756 aaagtag i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680821 7 - 29412213 CAGGTAG i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121848 7 + 15657440 GAAGTAG i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20011 7 + 26375 GAAGTAG i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10611937 7 + 48449771 AAAGTAA i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337667 7 - 3145599 GACATAA i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257123 7 - 2114266 GAAGTAG i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 2863 7 + 126815 I a score=23661.000000 s galGal6.chrUn_NW_020110065v1 4362 5 + 13513 aagat s pelCri1.KK492659 2870 5 + 126815 aagat i pelCri1.KK492659 I 7 I 15 s thaSir1.NW_013658552v1 419498 5 + 511692 aaaat i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363758 5 - 1799426 AAGAT i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479917 5 + 107808587 AATAT i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11609990 5 + 36466354 AAAAT i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488746 5 - 6722756 aaaat i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680828 5 - 29412213 AAGAT i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121855 5 + 15657440 AAGAT i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20018 5 + 26375 AAGAT i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10611944 5 + 48449771 AAAAT i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337674 5 - 3145599 TAAAC i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257130 5 - 2114266 AAGAC i letCam1.KE993770 C 0 C 0 a score=54485.000000 s galGal6.chrUn_NW_020110065v1 4367 20 + 13513 gaaggggtCGAGCGCGgtgc s thaSir1.NW_013658552v1 419503 20 + 511692 aacaggATCCAACACCGTGT i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363763 20 - 1799426 TGCTGGGTCTAAGGACGCAT i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479922 20 + 107808587 AAACGGGTCCAGGCAGGCAT i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11609995 20 + 36466354 AAGAGGGTCTAGGCAGGCAT i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488751 20 - 6722756 aagAGGGTCTAGACAGGCAT i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680833 20 - 29412213 GAGGGGGTCCAGGCAGGCGT i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121860 20 + 15657440 GATGGGATCCAGGCAGGCGT i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20023 20 + 26375 GAGCGGGTCCAGGCAGGCGT i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10611949 20 + 48449771 GATGGGGTCCAAACAGGCAT i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337679 20 - 3145599 GAAAGAGTCCAGGCAGGTGT i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257135 20 - 2114266 GAACGGATCGAGGCAGGCGC i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 2875 15 + 126815 I a score=27891.000000 s galGal6.chrUn_NW_020110065v1 4387 17 + 13513 tgagggt-ggtgagg---agc s pelCri1.KK492659 2890 16 + 126815 tgagaac-ag-gagg---agg i pelCri1.KK492659 I 15 I 14 s thaSir1.NW_013658552v1 419523 17 + 511692 TGAGGGA-AGTCAGG---CAG i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363783 17 - 1799426 TGAGGGT-GCTGAGG---AGC i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479942 17 + 107808587 TAAAGGT-GCTGCAC---AGC i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610015 17 + 36466354 TGAAGGT-GCTGCAC---AGC i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488771 17 - 6722756 TGAAGGT-GCTGCAC---AGC i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680853 17 - 29412213 TGAGGGT-GCTGGAG---AGC i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121880 17 + 15657440 TTAAGGT-GCTGCAG---AGC i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20043 17 + 26375 TGAAGGT-GCTGAAC---AGG i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10611969 17 + 48449771 TCAGAGT-GCTGAAT---AGC i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337699 21 - 3145599 TAAGACTCGCCAGCGCCAAGC i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257155 20 - 2114266 TGAGGCT-GCTGAAGGCGAGC i letCam1.KE993770 C 0 C 0 a score=10718.000000 s galGal6.chrUn_NW_020110065v1 4404 15 + 13513 a-gagcataAGC-CTCC s thaSir1.NW_013658552v1 419540 16 + 511692 A-ATGTCTCTGTTCTCC i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363800 16 - 1799426 A-AAGCATAGACTCTCC i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479959 16 + 107808587 A-AGGCCTTATCTCTCC i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610032 16 + 36466354 A-GGGCCTTGTCTCTCC i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488788 16 - 6722756 A-GGGCCTTGTCTCTCC i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680870 16 - 29412213 A-GGGCGATGCTCCTCC i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121897 16 + 15657440 A-ACGCCATGTTCCTCC i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20060 16 + 26375 A-GGGCGTAGACGCGCC i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10611986 16 + 48449771 A-GAGCAAAGTGTCGCC i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337720 16 - 3145599 A-GATCTTGTAGACCCC i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257175 17 - 2114266 GTGAGCCGGTAGACCCC i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 2906 14 + 126815 I a score=5634.000000 s galGal6.chrUn_NW_020110065v1 4419 1 + 13513 A s pelCri1.KK492659 2920 1 + 126815 a i pelCri1.KK492659 I 14 I 8 s thaSir1.NW_013658552v1 419556 1 + 511692 A i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363816 1 - 1799426 A i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479975 1 + 107808587 A i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610048 1 + 36466354 A i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488804 1 - 6722756 A i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680886 1 - 29412213 A i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121913 1 + 15657440 A i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20076 1 + 26375 A i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612002 1 + 48449771 A i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337736 1 - 3145599 A i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257192 1 - 2114266 G i letCam1.KE993770 C 0 C 0 a score=-3754.000000 s galGal6.chrUn_NW_020110065v1 4420 8 + 13513 gtcagggc s thaSir1.NW_013658552v1 419557 8 + 511692 GGAAGGGC i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363817 8 - 1799426 CTCAGGGC i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479976 8 + 107808587 GGCAGGAC i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610049 8 + 36466354 TGCCGGAC i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488805 8 - 6722756 CGCCGGAC i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680887 8 - 29412213 ATCCTCAT i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121914 8 + 15657440 CTCCTCGC i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20077 8 + 26375 GGAGGGGC i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612003 8 + 48449771 ACCTTCGC i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337737 8 - 3145599 TAGAGGGA i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257193 8 - 2114266 TACAGGCC i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 2921 8 + 126815 I a score=-7642.000000 s galGal6.chrUn_NW_020110065v1 4428 2 + 13513 tg- s pelCri1.KK492659 2929 2 + 126815 tT- i pelCri1.KK492659 I 8 I 22 s thaSir1.NW_013658552v1 419565 2 + 511692 tt- i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363825 2 - 1799426 TC- i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479984 2 + 107808587 TT- i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610057 2 + 36466354 TT- i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488813 2 - 6722756 TT- i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680895 2 - 29412213 TC- i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121922 2 + 15657440 TC- i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20085 2 + 26375 TC- i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612011 2 + 48449771 TA- i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337745 2 - 3145599 -CG i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257201 2 - 2114266 -GC i letCam1.KE993770 C 0 C 0 a score=10241.000000 s galGal6.chrUn_NW_020110065v1 4430 22 + 13513 ------------cgctgctgcacaaagc--ccacca s thaSir1.NW_013658552v1 419567 22 + 511692 ------------tttttAGTCACGAAGC--CCACAA i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363827 22 - 1799426 ------------TCGTTCTTAATGAAAC--CCACAA i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24479986 22 + 107808587 ------------TTCCATGTGATAAAAC--CCACCA i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610059 22 + 36466354 ------------TTCCACTTTATAAAAC--CAATGA i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488815 22 - 6722756 ------------TTCTTGTTTATAAAAC--CAATGA i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680897 22 - 29412213 ------------TCCTGGCGGACGAAGC--CCACCA i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121924 22 + 15657440 ------------TCCTGCCGGACGTACC--CCACCA i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20087 22 + 26375 ------------CGCCAGTGGGCGTAGC--CCACCA i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612013 22 + 48449771 ------------TTCCGATGGATGAAAC--CAACCA i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337747 36 - 3145599 TGTTCTGATAGAACTTTATGCGCAAAGCGTGCACCA i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257203 36 - 2114266 TGCTCCCGCGTATCCAGTTGAGCAGCGCGTGCGCCA i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 2931 22 + 126815 I a score=9506.000000 s galGal6.chrUn_NW_020110065v1 4452 8 + 13513 ----catgcGAG s pelCri1.KK492659 2953 7 + 126815 ----c-tgagtg i pelCri1.KK492659 I 22 I 32 s thaSir1.NW_013658552v1 419589 8 + 511692 ----CGTGGGTG i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363849 8 - 1799426 ----TGTGGGAG i anoCar2.chrUn_GL343281 C 0 C 0 s tetNig2.chrUn_random 24480008 8 + 107808587 ----CGTGTGAG i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610081 8 + 36466354 ----TGTGTGAG i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488837 8 - 6722756 ----TGTGTGAG i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680919 8 - 29412213 ----CATGGGAA i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121946 8 + 15657440 ----CGTGGGAG i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20109 8 + 26375 ----CGTGCGAG i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612035 8 + 48449771 ----CGTGTGAG i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337783 8 - 3145599 GCAACGTG---- i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257239 8 - 2114266 GCAGCACG---- i letCam1.KE993770 C 0 C 0 a score=61416.000000 s galGal6.chrUn_NW_020110065v1 4460 33 + 13513 ATGTTGTAGGGTCCAAAGCAGACC-CCAAGTTGG------ s thaSir1.NW_013658552v1 419597 34 + 511692 ATATTGTAAGGAGCAAAGGCCAGAGTGAAATTGA------ i thaSir1.NW_013658552v1 C 0 I 1 s anoCar2.chrUn_GL343281 1363857 34 - 1799426 ATGTTGTAAGGAGCGAAGCAGATGGCAAAGTTGA------ i anoCar2.chrUn_GL343281 C 0 I 1 s tetNig2.chrUn_random 24480016 34 + 107808587 ATGTTGTAGGGGccaaaacagacagcaaacactA------ i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610089 34 + 36466354 ACGTTGTAGGGTCCAAAACATAGAGCAAACACCA------ i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488845 34 - 6722756 ACGTTGTAGGGTCCAAAACATAGAGCAAACACCA------ i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680927 34 - 29412213 GCGTTGTACGGCCCGAAGCAGACTGTGAAGACGA------ i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121954 34 + 15657440 GCGTTGTAGGGCCCAAAGCACACGGTGAACACTG------ i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20117 34 + 26375 ACGTTGTAGGGCCCGAAGCAGAGCATGAAGACCA------ i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612043 34 + 48449771 ATGTTATAAGGGCTGAAGCAGATGGTGAAAACCA------ i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337791 40 - 3145599 ACGTTCGTGGGAACGAAGCACAGGACAAAGGCTCCGAGCA i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257247 40 - 2114266 CAGTTGCACGGCGCGAAGCACGTGACGAACATGAGCAGCA i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 2960 32 + 126815 I a score=-961.000000 s galGal6.chrUn_NW_020110065v1 4493 1 + 13513 C s pelCri1.KK492659 2992 1 + 126815 C i pelCri1.KK492659 I 32 I 57 s tetNig2.chrUn_random 24480050 1 + 107808587 T i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610123 1 + 36466354 C i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488879 1 - 6722756 C i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680961 1 - 29412213 T i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121988 1 + 15657440 T i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20151 1 + 26375 G i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612077 1 + 48449771 A i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337831 1 - 3145599 C i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257287 1 - 2114266 C i letCam1.KE993770 C 0 C 0 e anoCar2.chrUn_GL343281 1363891 1 - 1799426 I e thaSir1.NW_013658552v1 419631 1 + 511692 I a score=3112.000000 s galGal6.chrUn_NW_020110065v1 4494 40 + 13513 catggtgaccacagcca------------------------------------gccccacagtgcggtacttcttc- s thaSir1.NW_013658552v1 419632 40 + 511692 CAAGGTAGCCACAGCTA------------------------------------AGCCCACGGCTCTCTGCCTCTTC- i thaSir1.NW_013658552v1 I 1 C 0 s anoCar2.chrUn_GL343281 1363892 40 - 1799426 CAACGTCACCACGGCCA------------------------------------GGCCCACAGCCCGTTGCTTCCTT- i anoCar2.chrUn_GL343281 I 1 C 0 s tetNig2.chrUn_random 24480051 40 + 107808587 AAGAGTTCCCAACGCCA------------------------------------TCCCTATGGCCCGCAGGCGTCGA- i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610124 40 + 36466354 CAGGGTTCCCAAAGCCA------------------------------------TGCCCATGGCTCGGATGCGCCGG- i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488880 40 - 6722756 CAGGGTTCCCAAAGCCA------------------------------------TGCCCATGGCTCGGATGCGCCGG- i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10680962 40 - 29412213 GAGTGTGCCGAGCGCCA------------------------------------GGCCAATGCAACGTAGCCTCCGT- i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2121989 40 + 15657440 CAGGGTGCCGAACGCCA------------------------------------GGCCGATGGCGCGCATCCTGCGC- i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20152 40 + 26375 CAGCGTGCCCAGCGCCA------------------------------------TGCCGATGGCCCGCTGCCGCTTG- i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612078 40 + 48449771 GAGTGTCCCAACCGCCA------------------------------------ACCCAATGGCTCTGAGTCTGCGA- i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337832 52 - 3145599 CGTGACGCACAGATGCA---------------------CGGCCTT----CTTCTTCTCTCGGTCCATTTGTTCCCCT i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257288 77 - 2114266 CACGGCGGACAGCCGCATGGCTCGGCGACGAAAGTTGCCGACCTTGGcgccaccgcccgcggtgccgccgctgccgc i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 2993 57 + 126815 I a score=10793.000000 s galGal6.chrUn_NW_020110065v1 4534 5 + 13513 tgcag s thaSir1.NW_013658552v1 419672 5 + 511692 TGGGG i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363932 5 - 1799426 CGGGC i anoCar2.chrUn_GL343281 C 0 C 0 s xenTro9.chr9 17527221 5 + 80437102 TGTCA i xenTro9.chr9 N 0 C 0 s tetNig2.chrUn_random 24480091 5 + 107808587 CGCCG i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610164 5 + 36466354 CGCCG i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488920 5 - 6722756 CGCCG i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10681002 5 - 29412213 CGCCG i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2122029 5 + 15657440 CGCCT i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20192 5 + 26375 GGCAG i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612118 5 + 48449771 CGCCG i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337884 5 - 3145599 CGTCG i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257365 5 - 2114266 cgccg i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 2993 57 + 126815 I a score=-20619.000000 s galGal6.chrUn_NW_020110065v1 4539 18 + 13513 tgggatgtgggtCGAGTG-- s phoRub1.KK408240 342 18 - 10760 tgggatcTCTTTCTAGGG-- i phoRub1.KK408240 N 0 C 0 s thaSir1.NW_013658552v1 419677 18 + 511692 CTTAATGTTGGGCATGCT-- i thaSir1.NW_013658552v1 C 0 I 1 s anoCar2.chrUn_GL343281 1363937 18 - 1799426 TTGTATGTTTGGTAAGGA-- i anoCar2.chrUn_GL343281 C 0 I 1 s xenTro9.chr9 17527226 18 + 80437102 TGGTGTGTGGCGCAGCAA-- i xenTro9.chr9 C 0 I 1 s tetNig2.chrUn_random 24480096 18 + 107808587 GTCAATGTTATTCAGCCT-- i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610169 18 + 36466354 GTCAATGTGTTGCAGCTT-- i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488925 18 - 6722756 GTCAATGTGTTGCAGCTT-- i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10681007 18 - 29412213 ACTGATGTTGGGGAGGCG-- i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2122034 18 + 15657440 GCCGATGTTCGGCAGGCG-- i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20197 18 + 26375 GCTGATGTTGGGCAGCCG-- i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612123 18 + 48449771 TCCCAGATGGGGCAGGTT-- i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337889 13 - 3145599 -----AGAGGAGCGCCTC-- i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257370 9 - 2114266 -----c------cgcctttg i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 2993 57 + 126815 I a score=-2298.000000 s galGal6.chrUn_NW_020110065v1 4557 1 + 13513 A s phoRub1.KK408240 360 1 - 10760 A i phoRub1.KK408240 C 0 C 0 s pelCri1.KK492659 3050 1 + 126815 g i pelCri1.KK492659 I 57 I 37 s thaSir1.NW_013658552v1 419696 1 + 511692 T i thaSir1.NW_013658552v1 I 1 C 0 s anoCar2.chrUn_GL343281 1363956 1 - 1799426 G i anoCar2.chrUn_GL343281 I 1 C 0 s tetNig2.chrUn_random 24480114 1 + 107808587 G i tetNig2.chrUn_random C 0 I 1 s oreNil3.chrLG11 11610187 1 + 36466354 T i oreNil3.chrLG11 C 0 I 1 s mayZeb1.JH720519 1488943 1 - 6722756 T i mayZeb1.JH720519 C 0 I 1 s oryLat2.chr11 10681025 1 - 29412213 G i oryLat2.chr11 C 0 I 1 s gasAcu1.chrX 2122052 1 + 15657440 C i gasAcu1.chrX C 0 I 1 s angJap1.KI319851 20215 1 + 26375 G i angJap1.KI319851 C 0 I 1 s danRer11.chr19 10612141 1 + 48449771 G i danRer11.chr19 C 0 I 1 s letCam1.KE993770 257379 1 - 2114266 g i letCam1.KE993770 C 0 C 0 e xenTro9.chr9 17527244 1 + 80437102 I e petMar3.PIZI01000069v1 1337902 0 - 3145599 C a score=87719.000000 s galGal6.chrUn_NW_020110065v1 4558 30 + 13513 GGAGGGCACGGATGAAGCAGATGTAGCAGA s phoRub1.KK408240 361 30 - 10760 AGGGGACATAGACAAAGCGATTGGAAAAGG i phoRub1.KK408240 C 0 C 0 s thaSir1.NW_013658552v1 419697 30 + 511692 TTAAGATGCGGATCACGTTGGCATAGCAGG i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1363957 30 - 1799426 TCAGGATGCGGATTAAGTTGACGTAGCAGA i anoCar2.chrUn_GL343281 C 0 C 0 s xenTro9.chr9 17527245 26 + 80437102 GCAAGGCATATGGGGTTTAGATGTCG---- i xenTro9.chr9 I 1 C 0 s tetNig2.chrUn_random 24480116 30 + 107808587 ACAGAACCCGGATAAAGTTGATGTAGCAAA i tetNig2.chrUn_random I 1 I 2 s oreNil3.chrLG11 11610189 30 + 36466354 AGAGAATTCTGATGAAGTTGATGTAGCAAA i oreNil3.chrLG11 I 1 I 2 s mayZeb1.JH720519 1488945 30 - 6722756 AGAGAATTCTGATGAAGTTGATGTAGCAAA i mayZeb1.JH720519 I 1 I 2 s oryLat2.chr11 10681027 30 - 29412213 ACAGGATGAGGATGAAGTTGATGTAGCAGA i oryLat2.chr11 I 1 I 2 s gasAcu1.chrX 2122054 30 + 15657440 ACAGGATGAGGATGAAGTTGACGTAGCAGA i gasAcu1.chrX I 1 I 2 s angJap1.KI319851 20217 30 + 26375 ACAGGATGCGGATGAAGTTGACGTAGCAGA i angJap1.KI319851 I 1 I 2 s danRer11.chr19 10612143 30 + 48449771 AGAGGATTCGGATGAAGTTGATGTAGCAGA i danRer11.chr19 I 1 I 2 s petMar3.PIZI01000069v1 1337902 28 - 3145599 --AGTGAGCGCATGATGGCAACGTAGCAGA i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257380 30 - 2114266 CGAGCTCGCGGATGACGGACACGTAGCAGA i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 3051 37 + 126815 I a score=-59436.000000 s galGal6.chrUn_NW_020110065v1 4588 14 + 13513 ---CCATGGTGATGGCA s phoRub1.KK408240 391 4 - 10760 -------------AGCA i phoRub1.KK408240 C 0 C 0 s pelCri1.KK492659 3088 14 + 126815 ---tcactttctaggga i pelCri1.KK492659 I 37 I 8 s thaSir1.NW_013658552v1 419727 11 + 511692 ------CAATGGTGACG i thaSir1.NW_013658552v1 C 0 I 3 s anoCar2.chrUn_GL343281 1363987 11 - 1799426 ------AGAGGGAGACA i anoCar2.chrUn_GL343281 C 0 I 3 s xenTro9.chr9 17527271 9 + 80437102 --------GTTGTGATG i xenTro9.chr9 C 0 I 3 s tetNig2.chrUn_random 24480148 12 + 107808587 ---CAGCTGATCAAG-- i tetNig2.chrUn_random I 2 C 0 s oreNil3.chrLG11 11610221 12 + 36466354 ---CTAGAAATCAGG-- i oreNil3.chrLG11 I 2 C 0 s mayZeb1.JH720519 1488977 12 - 6722756 ---CTAGAAATCAGG-- i mayZeb1.JH720519 I 2 C 0 s oryLat2.chr11 10681059 12 - 29412213 ---CAGCTGATGAGG-- i oryLat2.chr11 I 2 C 0 s gasAcu1.chrX 2122086 12 + 15657440 ---CAGCAGATGAGG-- i gasAcu1.chrX I 2 C 0 s angJap1.KI319851 20249 12 + 26375 ---GAGCAGACTAGG-- i angJap1.KI319851 I 2 C 0 s danRer11.chr19 10612175 12 + 48449771 ---CAGCAGATGAGG-- i danRer11.chr19 I 2 C 0 s petMar3.PIZI01000069v1 1337930 14 - 3145599 ACGTCGTGATGGCG--- i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257410 14 - 2114266 AGACGGTGACGCAG--- i letCam1.KE993770 C 0 C 0 a score=22020.000000 s galGal6.chrUn_NW_020110065v1 4602 7 + 13513 GAGGGGA s phoRub1.KK408240 395 7 - 10760 CAagtcc i phoRub1.KK408240 C 0 C 0 s thaSir1.NW_013658552v1 419741 7 + 511692 AAAGGAA i thaSir1.NW_013658552v1 I 3 C 0 s anoCar2.chrUn_GL343281 1364001 7 - 1799426 AAAGGGA i anoCar2.chrUn_GL343281 I 3 C 0 s xenTro9.chr9 17527283 4 + 80437102 ---GACA i xenTro9.chr9 I 3 I 3 s tetNig2.chrUn_random 24480160 7 + 107808587 AAAGGTA i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610233 7 + 36466354 AAAGGGA i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488989 7 - 6722756 AAAGGGA i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10681071 7 - 29412213 AAAGGGA i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2122098 7 + 15657440 AAGGGCA i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20261 7 + 26375 AAGGGGA i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612187 7 + 48449771 AGGGGTA i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337944 7 - 3145599 AACGGAG i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257424 7 - 2114266 AAGGGCA i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 3102 8 + 126815 I a score=-240.000000 s galGal6.chrUn_NW_020110065v1 4609 13 + 13513 TGAG-----GAAGGTGA------T s phoRub1.KK408240 402 24 - 10760 tcagcctctggaggtgACTCCTGT i phoRub1.KK408240 C 0 C 0 s pelCri1.KK492659 3110 13 + 126815 -----ttgacaaagtga------t i pelCri1.KK492659 I 8 I 98 s thaSir1.NW_013658552v1 419748 13 + 511692 -----GTAAGAAGAGGA------C i thaSir1.NW_013658552v1 C 0 I 1 s anoCar2.chrUn_GL343281 1364008 13 - 1799426 -----CCAAGAAGAGAG------A i anoCar2.chrUn_GL343281 C 0 I 1 s xenTro9.chr9 17527290 9 + 80437102 ---------GAAGCTGA------T i xenTro9.chr9 I 3 I 3 s tetNig2.chrUn_random 24480167 13 + 107808587 -----TGCAAAACAGTA------T i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610240 13 + 36466354 -----TGCAGAAAAGCA------C i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1488996 13 - 6722756 -----TGCAGAAAAGCA------C i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10681078 13 - 29412213 -----TGCAGAAGAGCA------T i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2122105 13 + 15657440 -----CGCAGAAGAGAA------C i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20268 13 + 26375 -----TGCAGAAGAGCA------C i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612194 13 + 48449771 -----TACAGAAAAGCA------G i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337951 13 - 3145599 -----CCAGGAAGGCGA------T i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257431 13 - 2114266 -----GCAGGAAGATGA------C i letCam1.KE993770 C 0 C 0 a score=-1275.000000 s galGal6.chrUn_NW_020110065v1 4622 1 + 13513 G s phoRub1.KK408240 426 1 - 10760 C i phoRub1.KK408240 C 0 C 0 s xenTro9.chr9 17527302 1 + 80437102 G i xenTro9.chr9 I 3 C 0 s tetNig2.chrUn_random 24480180 1 + 107808587 G i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610253 1 + 36466354 C i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1489009 1 - 6722756 C i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10681091 1 - 29412213 G i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2122118 1 + 15657440 C i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20281 1 + 26375 C i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612207 1 + 48449771 G i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337964 1 - 3145599 G i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257444 1 - 2114266 G i letCam1.KE993770 C 0 C 0 e anoCar2.chrUn_GL343281 1364021 1 - 1799426 I e thaSir1.NW_013658552v1 419761 1 + 511692 I e pelCri1.KK492659 3123 98 + 126815 I a score=8077.000000 s galGal6.chrUn_NW_020110065v1 4623 5 + 13513 AGGCA s phoRub1.KK408240 427 5 - 10760 AGGCA i phoRub1.KK408240 C 0 C 0 s phaCar1.KL435607 23265 5 - 58663 AGCCT i phaCar1.KL435607 N 0 I 45 s thaSir1.NW_013658552v1 419762 5 + 511692 AAGAA i thaSir1.NW_013658552v1 I 1 C 0 s anoCar2.chrUn_GL343281 1364022 5 - 1799426 ACGCA i anoCar2.chrUn_GL343281 I 1 C 0 s xenTro9.chr9 17527303 5 + 80437102 GGGTT i xenTro9.chr9 C 0 C 0 s tetNig2.chrUn_random 24480181 5 + 107808587 ACAAA i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610254 5 + 36466354 ACACA i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1489010 5 - 6722756 ACACA i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10681092 5 - 29412213 AGGAA i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2122119 5 + 15657440 AAGAA i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20282 5 + 26375 AGGAA i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612208 5 + 48449771 AGGAA i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337965 5 - 3145599 GCGAA i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257445 5 - 2114266 AGGAA i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 3123 98 + 126815 I a score=-11905.000000 s galGal6.chrUn_NW_020110065v1 4628 42 + 13513 -GAGTGAAAGGCGCAGCAGTAGGACGAAGTG-CTGCTGGGTTTT---- s phoRub1.KK408240 432 32 - 10760 -TGAAGGAAGG-GTATCCCTTCAAGGA----------GGATGTT---- i phoRub1.KK408240 C 0 C 0 s thaSir1.NW_013658552v1 419767 42 + 511692 -GAGCTCCAGGCGGAAAGGGAGGACGACGGC-AAGCTGTTTATC---- i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1364027 42 - 1799426 -GAGCTCCAGTCGGACAGGGAGAAGAATGTC-AAGCTGCCTGGA---- i anoCar2.chrUn_GL343281 C 0 C 0 s xenTro9.chr9 17527308 42 + 80437102 -TGGCAATGGGGTCAGGTGTGGGAGGAAGTT-TTGCAATGGTGT---- i xenTro9.chr9 C 0 C 0 s tetNig2.chrUn_random 24480186 42 + 107808587 -CAGCTCCAGACGAACCGGCAGGAGAATGTT-GAGCTGGGCGTC---- i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610259 42 + 36466354 -AAGCTCCAGGCGCACAGGCAGGAGGACGTT-CAGCTGAGACTC---- i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1489015 42 - 6722756 -AAGCTCCAGGCGCACAGGCAGGAGGACGTT-CAGCTGAGACTC---- i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10681097 42 - 29412213 -GAGCTCCAATCGGACGGACATGACGATGCT-GAGCTCCTCTGG---- i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2122124 42 + 15657440 -GAGCTCCAGGCGCACCCGCAGCACGATGTT-CAGCTCCTCCGG---- i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20287 42 + 26375 -GAGCTCCAGGCGCACGGGCAGCAGCACCTC-CAGCTGCGCTGG---- i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612213 42 + 48449771 -AAGCTCCAGGCGAACAGGAAGCAGAATGGT-CATCTGCTCTAA---- i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1337970 42 - 3145599 GAAGACCATGGAGTAGATGACGAGGAAT----CGGC--CGCCACTTCT i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257450 48 - 2114266 GAAGACGACGCAGTAGACTTGGAAGAAGGTGACGACGGCGTCGCTCTT i letCam1.KE993770 C 0 C 0 e phaCar1.KL435607 23270 45 - 58663 I e pelCri1.KK492659 3123 98 + 126815 I a score=8516.000000 s galGal6.chrUn_NW_020110065v1 4670 3 + 13513 GGA s phoRub1.KK408240 464 3 - 10760 GTA i phoRub1.KK408240 C 0 C 0 s phaCar1.KL435607 23315 3 - 58663 GGA i phaCar1.KL435607 I 45 N 0 s thaSir1.NW_013658552v1 419809 3 + 511692 GGA i thaSir1.NW_013658552v1 C 0 C 0 s anoCar2.chrUn_GL343281 1364069 3 - 1799426 GGA i anoCar2.chrUn_GL343281 C 0 C 0 s xenTro9.chr9 17527350 3 + 80437102 GGG i xenTro9.chr9 C 0 C 0 s tetNig2.chrUn_random 24480228 3 + 107808587 GGT i tetNig2.chrUn_random C 0 C 0 s oreNil3.chrLG11 11610301 3 + 36466354 GGT i oreNil3.chrLG11 C 0 C 0 s mayZeb1.JH720519 1489057 3 - 6722756 GGT i mayZeb1.JH720519 C 0 C 0 s oryLat2.chr11 10681139 3 - 29412213 GGT i oryLat2.chr11 C 0 C 0 s gasAcu1.chrX 2122166 3 + 15657440 GCT i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20329 3 + 26375 CGT i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612255 3 + 48449771 GGT i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1338012 3 - 3145599 GGT i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257498 3 - 2114266 GGG i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 3123 98 + 126815 I a score=33284.000000 s galGal6.chrUn_NW_020110065v1 4673 15 + 13513 TAAG-TCGTCGTAGCA s phoRub1.KK408240 467 13 - 10760 T--G-TCACCCAGGCA i phoRub1.KK408240 C 0 C 0 s thaSir1.NW_013658552v1 419812 15 + 511692 GAAG-TTATAGTAGCA i thaSir1.NW_013658552v1 C 0 N 0 s anoCar2.chrUn_GL343281 1364072 15 - 1799426 GAAT-TTTTCATAGCA i anoCar2.chrUn_GL343281 C 0 I 1 s xenTro9.chr9 17527353 15 + 80437102 TCAG-TGAGTGTGGCA i xenTro9.chr9 C 0 C 0 s tetNig2.chrUn_random 24480231 16 + 107808587 AAAATTTCTCATAGCA i tetNig2.chrUn_random C 0 N 0 s oreNil3.chrLG11 11610304 15 + 36466354 GAAG-TTCTCATAGCA i oreNil3.chrLG11 C 0 I 8 s mayZeb1.JH720519 1489060 15 - 6722756 GAAG-TTCTCATAGCA i mayZeb1.JH720519 C 0 I 8 s oryLat2.chr11 10681142 15 - 29412213 GAAT-TCCAGGTAGCA i oryLat2.chr11 C 0 I 1 s gasAcu1.chrX 2122169 15 + 15657440 GAAA-TCCAGGTAGCA i gasAcu1.chrX C 0 C 0 s angJap1.KI319851 20332 15 + 26375 GAAC-TCCACGTAGCA i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612258 15 + 48449771 GAAG-TTATCGTAGCA i danRer11.chr19 C 0 C 0 s petMar3.PIZI01000069v1 1338015 15 - 3145599 GAAC-ACGTCGAAGCA i petMar3.PIZI01000069v1 C 0 C 0 s letCam1.KE993770 257501 15 - 2114266 GAAG-ACGTCGTAGCA i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 3123 98 + 126815 I a score=152.000000 s galGal6.chrUn_NW_020110065v1 4688 1 + 13513 G s phoRub1.KK408240 480 1 - 10760 A i phoRub1.KK408240 C 0 C 0 s xenTro9.chr9 17527368 1 + 80437102 G i xenTro9.chr9 C 0 C 0 s gasAcu1.chrX 2122184 1 + 15657440 G i gasAcu1.chrX C 0 N 0 s angJap1.KI319851 20347 1 + 26375 G i angJap1.KI319851 C 0 C 0 s petMar3.PIZI01000069v1 1338030 1 - 3145599 G i petMar3.PIZI01000069v1 C 0 N 0 s letCam1.KE993770 257516 1 - 2114266 T i letCam1.KE993770 C 0 I 1 e oryLat2.chr11 10681157 1 - 29412213 I e anoCar2.chrUn_GL343281 1364087 1 - 1799426 I e danRer11.chr19 10612273 0 + 48449771 C e pelCri1.KK492659 3123 98 + 126815 I e mayZeb1.JH720519 1489075 8 - 6722756 I e oreNil3.chrLG11 11610319 8 + 36466354 I a score=-1034.000000 s galGal6.chrUn_NW_020110065v1 4689 4 + 13513 TGGT s phoRub1.KK408240 481 4 - 10760 GTGC i phoRub1.KK408240 C 0 C 0 s lepDis1.JJRK01080001 9654 4 - 11067 ATGT i lepDis1.JJRK01080001 N 0 N 0 s anoCar2.chrUn_GL343281 1364088 4 - 1799426 TTGG i anoCar2.chrUn_GL343281 I 1 I 2 s xenTro9.chr9 17527369 4 + 80437102 TGGT i xenTro9.chr9 C 0 C 0 s oreNil3.chrLG11 11610327 1 + 36466354 ---C i oreNil3.chrLG11 I 8 I 3 s mayZeb1.JH720519 1489083 1 - 6722756 ---T i mayZeb1.JH720519 I 8 I 3 s angJap1.KI319851 20348 4 + 26375 GTGC i angJap1.KI319851 C 0 I 3 s danRer11.chr19 10612273 2 + 48449771 --GT i danRer11.chr19 C 0 I 3 s letCam1.KE993770 257518 4 - 2114266 TGGT i letCam1.KE993770 I 1 C 0 e oryLat2.chr11 10681157 1 - 29412213 I e pelCri1.KK492659 3123 98 + 126815 I a score=-17232.000000 s galGal6.chrUn_NW_020110065v1 4693 4 + 13513 ------AGCC s phoRub1.KK408240 485 4 - 10760 ------ACCA i phoRub1.KK408240 C 0 C 0 s anoCar2.chrUn_GL343281 1364094 2 - 1799426 ------AC-- i anoCar2.chrUn_GL343281 I 2 N 0 s xenTro9.chr9 17527373 4 + 80437102 ------AGCC i xenTro9.chr9 C 0 C 0 s oreNil3.chrLG11 11610331 1 + 36466354 ------A--- i oreNil3.chrLG11 I 3 C 0 s mayZeb1.JH720519 1489087 1 - 6722756 ------A--- i mayZeb1.JH720519 I 3 C 0 s oryLat2.chr11 10681158 1 - 29412213 ------G--- i oryLat2.chr11 I 1 C 0 s angJap1.KI319851 20355 1 + 26375 ------T--- i angJap1.KI319851 I 3 C 0 s danRer11.chr19 10612278 1 + 48449771 ------T--- i danRer11.chr19 I 3 C 0 s letCam1.KE993770 257522 6 - 2114266 GACGCC---- i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 3123 98 + 126815 I a score=-2944.000000 s galGal6.chrUn_NW_020110065v1 4697 6 + 13513 CCGGTG s phoRub1.KK408240 489 5 - 10760 CCA-TG i phoRub1.KK408240 C 0 C 0 s xenTro9.chr9 17527377 1 + 80437102 -----G i xenTro9.chr9 C 0 I 5 s oreNil3.chrLG11 11610332 6 + 36466354 TCTGTG i oreNil3.chrLG11 C 0 I 3 s mayZeb1.JH720519 1489088 6 - 6722756 TCGCTG i mayZeb1.JH720519 C 0 I 3 s oryLat2.chr11 10681159 6 - 29412213 TGGGTG i oryLat2.chr11 C 0 I 2 s angJap1.KI319851 20356 6 + 26375 CTCCTG i angJap1.KI319851 C 0 I 2 s danRer11.chr19 10612279 6 + 48449771 CACATG i danRer11.chr19 C 0 I 2 s letCam1.KE993770 257528 6 - 2114266 CAGCTC i letCam1.KE993770 C 0 C 0 e pelCri1.KK492659 3123 98 + 126815 I a score=-12747.000000 s galGal6.chrUn_NW_020110065v1 4703 6 + 13513 GGGTTG------------- s phoRub1.KK408240 494 6 - 10760 gagaga------------- i phoRub1.KK408240 C 0 C 0 s pelCri1.KK492659 3221 4 + 126815 -agtg-------------- i pelCri1.KK492659 I 98 N 0 s xenTro9.chr9 17527383 6 + 80437102 GGGTAG------------- i xenTro9.chr9 I 5 C 0 s oreNil3.chrLG11 11610341 4 + 36466354 GGGT--------------- i oreNil3.chrLG11 I 3 C 0 s mayZeb1.JH720519 1489097 4 - 6722756 GGGT--------------- i mayZeb1.JH720519 I 3 C 0 s oryLat2.chr11 10681167 4 - 29412213 GGGG--------------- i oryLat2.chr11 I 2 C 0 s angJap1.KI319851 20364 4 + 26375 GGGC--------------- i angJap1.KI319851 I 2 C 0 s danRer11.chr19 10612287 4 + 48449771 GATT--------------- i danRer11.chr19 I 2 C 0 s letCam1.KE993770 257534 17 - 2114266 GGGC--ACGCGCCGCGTCA i letCam1.KE993770 C 0 C 0 a score=-5361.000000 s galGal6.chrUn_NW_020110065v1 4709 13 + 13513 GGTCT--------CAGAGGTG s phoRub1.KK408240 500 13 - 10760 ggtat--------ccagtacC i phoRub1.KK408240 C 0 C 0 s xenTro9.chr9 17527389 13 + 80437102 AATTT--------CAGGGTTG i xenTro9.chr9 C 0 N 0 s oreNil3.chrLG11 11610345 6 + 36466354 ---------------GAGCTG i oreNil3.chrLG11 C 0 I 5 s mayZeb1.JH720519 1489101 6 - 6722756 ---------------GAGCTG i mayZeb1.JH720519 C 0 I 5 s oryLat2.chr11 10681171 6 - 29412213 ---------------AAGTTG i oryLat2.chr11 C 0 I 11 s angJap1.KI319851 20368 6 + 26375 ---------------GGGCTG i angJap1.KI319851 C 0 I 7 s danRer11.chr19 10612291 6 + 48449771 ---------------GAGCTG i danRer11.chr19 C 0 I 7 s letCam1.KE993770 257551 21 - 2114266 GGTCTACGGCGTGCAGGGGCG i letCam1.KE993770 C 0 C 0 a score=4764.000000 s galGal6.chrUn_NW_020110065v1 4722 6 + 13513 TCGTGG s phoRub1.KK408240 513 6 - 10760 TGAGGG i phoRub1.KK408240 C 0 C 0 s oreNil3.chrLG11 11610356 6 + 36466354 TTGAGG i oreNil3.chrLG11 I 5 I 9 s mayZeb1.JH720519 1489112 6 - 6722756 TTGAGG i mayZeb1.JH720519 I 5 N 0 s oryLat2.chr11 10681188 6 - 29412213 TTGTGG i oryLat2.chr11 I 11 I 2 s angJap1.KI319851 20381 6 + 26375 TTGCCG i angJap1.KI319851 I 7 C 0 s danRer11.chr19 10612304 6 + 48449771 CTGTAG i danRer11.chr19 I 7 I 3 s letCam1.KE993770 257572 6 - 2114266 CCGTGG i letCam1.KE993770 C 0 N 0 a score=-9709.000000 s galGal6.chrUn_NW_020110065v1 4728 3 + 13513 --------GA--G s phoRub1.KK408240 519 5 - 10760 --------AATTA i phoRub1.KK408240 C 0 C 0 s oreNil3.chrLG11 11610371 3 + 36466354 G------GG---- i oreNil3.chrLG11 I 9 C 0 s oryLat2.chr11 10681196 3 - 29412213 G------TG---- i oryLat2.chr11 I 2 C 0 s angJap1.KI319851 20387 2 + 26375 -------TG---- i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612313 9 + 48449771 GAGTTATCG---- i danRer11.chr19 I 3 C 0 a score=-4264.000000 s galGal6.chrUn_NW_020110065v1 4731 10 + 13513 GTCGAGGTGG s phoRub1.KK408240 524 10 - 10760 GCCGTGATGG i phoRub1.KK408240 C 0 C 0 s lepDis1.KK681594 111064 10 - 194327 GCTGTGCCAG i lepDis1.KK681594 N 0 C 0 s oreNil3.chrLG11 11610374 7 + 36466354 ACTGTAG--- i oreNil3.chrLG11 C 0 C 0 s oryLat2.chr11 10681199 10 - 29412213 GCCGTGATTG i oryLat2.chr11 C 0 N 0 s angJap1.KI319851 20389 4 + 26375 CTCG------ i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612322 4 + 48449771 CTCG------ i danRer11.chr19 C 0 C 0 a score=-3097.000000 s galGal6.chrUn_NW_020110065v1 4741 11 + 13513 AGGTGGTGTAG- s phoRub1.KK408240 534 10 - 10760 AGGTGATTTA-- i phoRub1.KK408240 C 0 I 1 s lepDis1.KK681594 111074 10 - 194327 AAGTGATTTG-- i lepDis1.KK681594 C 0 I 1 s oreNil3.chrLG11 11610381 11 + 36466354 AGTTCTTGTG-G i oreNil3.chrLG11 C 0 N 0 s angJap1.KI319851 20393 11 + 26375 AAGTACTGCA-T i angJap1.KI319851 C 0 C 0 s danRer11.chr19 10612326 11 + 48449771 AGTCTATGTA-T i danRer11.chr19 C 0 C 0 a score=443.000000 s galGal6.chrUn_NW_020110065v1 4752 1 + 13513 A s opiHoa1.KK736143 2316204 1 + 7072827 G i opiHoa1.KK736143 N 0 C 0 s phoRub1.KK408240 545 1 - 10760 G i phoRub1.KK408240 I 1 C 0 s lepDis1.KK681594 111085 1 - 194327 A i lepDis1.KK681594 I 1 C 0 s angJap1.KI319851 20404 1 + 26375 G i angJap1.KI319851 C 0 T 9561 s danRer11.chr19 10612337 1 + 48449771 G i danRer11.chr19 C 0 I 2 a score=-1949.000000 s galGal6.chrUn_NW_020110065v1 4753 24 + 13513 ATGGTGTTCAGAATGatgatcttt--- s opiHoa1.KK736143 2316205 21 + 7072827 ATGACTT---GAACAATGAGCAGT--- i opiHoa1.KK736143 C 0 C 0 s phoRub1.KK408240 546 21 - 10760 ATGACCT---GAACAATGAAGAGT--- i phoRub1.KK408240 C 0 C 0 s lepDis1.KK681594 111086 21 - 194327 ATGACCT---GGACAACAAGCAGT--- i lepDis1.KK681594 C 0 C 0 s angJap1.KI319851 10844 18 + 26375 ACCCAGA---AGAAGACGCTG------ i angJap1.KI319851 T 9561 C 0 s danRer11.chr19 10612340 24 + 48449771 ACGATGT---AAACAATGCTGAGGTTT i danRer11.chr19 I 2 N 0 a score=14521.000000 s galGal6.chrUn_NW_020110065v1 4777 70 + 13513 ----tcttccaacatccACATAATGTCAGAT----------------GTGGAAGCTTGCAGGGAGTTCACT-----ATCGTTGTACGGCAAT-----TCA s opiHoa1.KK736143 2316226 86 + 7072827 ----TATCCAAAGATCCAGACGAAGTGAAGTCCACGCGACCCATGTGGTGGAAGTTTGTGCAGAGCAAATC-----ATCATCATATGTCAGC-----TCG i opiHoa1.KK736143 C 0 C 0 s phoRub1.KK408240 567 86 - 10760 ----TATCCGaagatccagatgaagtcaAGTGCACGCGACCCGTGTGGCAGAAGTTTGTATGGAGCGCACC-----ATCATTGTATACAAAC-----TCA i phoRub1.KK408240 C 0 C 0 s lepDis1.KK681594 111107 86 - 194327 ----TATCCAAAGATCCAGATGAAGGCAAGATTACATGACCCATGTGGTGGAATTTTGTATGGAGCCCACC-----ATCGTTGTATGCCAAC-----TCA i lepDis1.KK681594 C 0 I 2 s angJap1.KI319851 10862 88 + 26375 GCCATCACCGAGTA------------CACGGGCCTGCGGTTGAGGTTGTGCCAGATGGGGAAGGCCACGCCCAGGTAGCGCTCCACGCTGACGGCGGTCA i angJap1.KI319851 C 0 C 0 a score=-265.000000 s galGal6.chrUn_NW_020110065v1 4847 1 + 13513 G s opiHoa1.KK736143 2316312 1 + 7072827 T i opiHoa1.KK736143 C 0 I 1 s phoRub1.KK408240 653 1 - 10760 T i phoRub1.KK408240 C 0 I 1 s angJap1.KI319851 10950 1 + 26375 G i angJap1.KI319851 C 0 C 0 e lepDis1.KK681594 111193 2 - 194327 I a score=1205.000000 s galGal6.chrUn_NW_020110065v1 4848 2 + 13513 GA s opiHoa1.KK736143 2316314 2 + 7072827 GG i opiHoa1.KK736143 I 1 C 0 s phoRub1.KK408240 655 2 - 10760 GG i phoRub1.KK408240 I 1 C 0 s lepDis1.KK681594 111195 2 - 194327 GG i lepDis1.KK681594 I 2 I 1 s angJap1.KI319851 10951 2 + 26375 GA i angJap1.KI319851 C 0 C 0 a score=-265.000000 s galGal6.chrUn_NW_020110065v1 4850 1 + 13513 A s opiHoa1.KK736143 2316316 1 + 7072827 C i opiHoa1.KK736143 C 0 C 0 s phoRub1.KK408240 657 1 - 10760 C i phoRub1.KK408240 C 0 C 0 s angJap1.KI319851 10953 1 + 26375 A i angJap1.KI319851 C 0 C 0 e lepDis1.KK681594 111197 1 - 194327 I a score=-294.000000 s galGal6.chrUn_NW_020110065v1 4851 2 + 13513 AG- s opiHoa1.KK736143 2316317 2 + 7072827 AG- i opiHoa1.KK736143 C 0 C 0 s phoRub1.KK408240 658 2 - 10760 AG- i phoRub1.KK408240 C 0 C 0 s lepDis1.KK681594 111198 2 - 194327 AG- i lepDis1.KK681594 I 1 C 0 s angJap1.KI319851 10954 2 + 26375 -GA i angJap1.KI319851 C 0 C 0 a score=-1390.000000 s galGal6.chrUn_NW_020110065v1 4853 1 + 13513 -T s opiHoa1.KK736143 2316319 1 + 7072827 -T i opiHoa1.KK736143 C 0 C 0 s phoRub1.KK408240 660 1 - 10760 -T i phoRub1.KK408240 C 0 C 0 s lepDis1.KK681594 111200 1 - 194327 -T i lepDis1.KK681594 C 0 C 0 s eurHel1.JJRO01080163 1234 1 + 3836 -T i eurHel1.JJRO01080163 N 0 N 0 s angJap1.KI319851 10956 1 + 26375 A- i angJap1.KI319851 C 0 C 0 a score=9283.000000 s galGal6.chrUn_NW_020110065v1 4854 32 + 13513 AATGACGTGGAAA--TTTGGAGAGGAACAAGCAG s opiHoa1.KK736143 2316320 32 + 7072827 AATGACCTGGAAG--GACAGCAAGGAACAAACAG i opiHoa1.KK736143 C 0 C 0 s phoRub1.KK408240 661 32 - 10760 AATGACTGGGAAA--GACGGAGAGGAACAAATGG i phoRub1.KK408240 C 0 C 0 s lepDis1.KK681594 111201 32 - 194327 AATGACttggaaa--gacagagagagagaaatgg i lepDis1.KK681594 C 0 C 0 s angJap1.KI319851 10957 34 + 26375 GGTGCTGTTGTAGATGGTGGTGTAGAACAGGAAG i angJap1.KI319851 C 0 N 0 a score=7296.000000 s galGal6.chrUn_NW_020110065v1 4886 30 + 13513 TGAAGGAATTGCT-GACCAACTCTGGCAATT----------- s opiHoa1.KK736143 2316352 31 + 7072827 TGGATGAGTTGGTGGGTCAGCTCTGgcaatt----------- i opiHoa1.KK736143 C 0 N 0 s phoRub1.KK408240 693 31 - 10760 TGGATGAATTGGCTGGTCAAGTTTGGCAATA----------- i phoRub1.KK408240 C 0 C 0 s lepDis1.KK681594 111233 42 - 194327 tgGATGAATTGGCTGGCCAGCTCTGGCAACACGAAGAaagtc i lepDis1.KK681594 C 0 C 0 a score=38.000000 s galGal6.chrUn_NW_020110065v1 4916 1 + 13513 C s phoRub1.KK408240 724 1 - 10760 C i phoRub1.KK408240 C 0 C 0 s lepDis1.KK681594 111275 1 - 194327 t i lepDis1.KK681594 C 0 I 3 a score=-34.000000 s galGal6.chrUn_NW_020110065v1 4917 2 + 13513 CA s phoRub1.KK408240 725 2 - 10760 GA i phoRub1.KK408240 C 0 I 1 e lepDis1.KK681594 111276 3 - 194327 I a score=-31.000000 s galGal6.chrUn_NW_020110065v1 4919 1 + 13513 G s fulGla1.KK586807 7415 1 - 17801 a i fulGla1.KK586807 N 0 I 11 e lepDis1.KK681594 111276 3 - 194327 I e phoRub1.KK408240 727 1 - 10760 I a score=1092.000000 s galGal6.chrUn_NW_020110065v1 4920 2 + 13513 TT s fulGla1.KK586807 7427 2 - 17801 tt i fulGla1.KK586807 I 11 C 0 s phoRub1.KK408240 728 2 - 10760 TT i phoRub1.KK408240 I 1 N 0 s lepDis1.KK681594 111279 2 - 194327 tt i lepDis1.KK681594 I 3 C 0 a score=-611.000000 s galGal6.chrUn_NW_020110065v1 4922 43 + 13513 CCACCAGCCAGG----------AGGAATACAGGGACAGTT--GGGT-TCATAAAGG s fulGla1.KK586807 7429 54 - 17801 cctccccacagGCCTGCGTCTCGGCTGTGGGGAAACTGCC--AGACATGATAGACG i fulGla1.KK586807 C 0 C 0 s lepDis1.KK681594 111281 45 - 194327 ccttcctaCAGGTCTGCGTCTCAGCTCTGGAGAAACTGTCGTGGG----------- i lepDis1.KK681594 C 0 C 0 a score=-2126.000000 s galGal6.chrUn_NW_020110065v1 4965 3 + 13513 AGT- s fulGla1.KK586807 7483 2 - 17801 AG-- i fulGla1.KK586807 C 0 C 0 s lepDis1.KK681594 111326 3 - 194327 AG-T i lepDis1.KK681594 C 0 C 0 s egrGar1.KK500841 1356527 1 - 1522064 ---T i egrGar1.KK500841 N 0 I 26 a score=134.000000 s galGal6.chrUn_NW_020110065v1 4968 15 + 13513 --GCCCTGTTTGAGAGG s fulGla1.KK586807 7485 15 - 17801 --AAACTGTCCCAGGAG i fulGla1.KK586807 C 0 C 0 s lepDis1.KK681594 111329 17 - 194327 TCCAGCAATTCAAAGAG i lepDis1.KK681594 C 0 I 6 e egrGar1.KK500841 1356528 26 - 1522064 I a score=91.000000 s galGal6.chrUn_NW_020110065v1 4983 1 + 13513 T s fulGla1.KK586807 7500 1 - 17801 T i fulGla1.KK586807 C 0 C 0 e egrGar1.KK500841 1356528 26 - 1522064 I e lepDis1.KK681594 111346 6 - 194327 I a score=718.000000 s galGal6.chrUn_NW_020110065v1 4984 4 + 13513 TCCT s fulGla1.KK586807 7501 4 - 17801 TCCA i fulGla1.KK586807 C 0 C 0 s lepDis1.KK681594 111352 4 - 194327 TCCT i lepDis1.KK681594 I 6 C 0 e egrGar1.KK500841 1356528 26 - 1522064 I a score=926.000000 s galGal6.chrUn_NW_020110065v1 4988 8 + 13513 Aagattca s fulGla1.KK586807 7505 8 - 17801 ACAACTCA i fulGla1.KK586807 C 0 I 11 s lepDis1.KK681594 111356 8 - 194327 ATGCCCCA i lepDis1.KK681594 C 0 C 0 s egrGar1.KK500841 1356554 8 - 1522064 ACTTCCCA i egrGar1.KK500841 I 26 C 0 a score=26069.000000 s galGal6.chrUn_NW_020110065v1 4996 85 + 13513 -cctttctcacaa----CTCACCGAGTGGGAcgggacattttccttggcatcatgggcagaatgccctggataaagagcaagaggaatcc s fulGla1.KK586807 7524 83 - 17801 -TCCTACTCCCCA----CCTGTACCTCAGGA--GTAAGCGtccctctgctcaagagagaggatatcATGGATACACACCATGGGGCACCC i fulGla1.KK586807 I 11 N 0 s lepDis1.KK681594 111364 88 - 194327 CCTGTATGGACCAGTATCTCAGCTATTAGGA--GTAAGCATTCCTCTGCTCAAGGGAAAGGATATAGTGGGTACATACTACGGGCCACCC i lepDis1.KK681594 C 0 C 0 s phaLep1.KK448170 2993 77 - 4282 CCTGTACGGACCAGTATCTCAGCTGTTAGGA--GTAAGCGttcttctgctcaagagagaggatataGGGGGTACACACC----------- i phaLep1.KK448170 N 0 C 0 s egrGar1.KK500841 1356562 88 - 1522064 CCTGTATGGACCAGTATCTCAGCCATTAGGA--GTAAGTGTCCCTCTACTCAAGAGAGAGGATATAGTGGATACACACCACAGGGTACCC i egrGar1.KK500841 C 0 C 0 a score=-3575.000000 s galGal6.chrUn_NW_020110065v1 5081 32 + 13513 aGAAGGGCTATAACctgagttgagaaagaagg--------- s lepDis1.KK681594 111452 29 - 194327 TATGG---TTTTACCTGAATGAACAAGGAGAG--------- i lepDis1.KK681594 C 0 N 0 s phaLep1.KK448170 3070 12 - 4282 -------------------TGA-----GAGAGGATA----- i phaLep1.KK448170 C 0 C 0 s egrGar1.KK500841 1356650 38 - 1522064 TGTGG---TTTTATCTGCATGACCATGGAGAGGACATGAGG i egrGar1.KK500841 C 0 C 0 a score=-2678.000000 s galGal6.chrUn_NW_020110065v1 5113 56 + 13513 attcttgtttagggccatgtctga----gctctgtggcagctgtCACGT-----------CTACACGAGTT s phaLep1.KK448170 3082 64 - 4282 ------GAGGGGATACACACCTCGggccaccctgtggttttatCTGCGTGACCAcagagaggacatgagg- i phaLep1.KK448170 C 0 C 0 s egrGar1.KK500841 1356688 50 - 1522064 AAGTGGGATGGAAAATCTACCTCA----ACCCTAGGG--------GCAT---------GAGTACATGAGTT i egrGar1.KK500841 C 0 I 22 a score=491.000000 s galGal6.chrUn_NW_020110065v1 5169 16 + 13513 CAGCCTGATGGAGAGT s phaLep1.KK448170 3146 16 - 4282 aagtgaGATGGAAAAT i phaLep1.KK448170 C 0 C 0 e egrGar1.KK500841 1356738 22 - 1522064 I a score=-820.000000 s galGal6.chrUn_NW_020110065v1 5185 1 + 13513 G- s phaLep1.KK448170 3162 1 - 4282 -C i phaLep1.KK448170 C 0 C 0 s egrGar1.KK500841 1356760 1 - 1522064 G- i egrGar1.KK500841 I 22 N 0 a score=81.000000 s galGal6.chrUn_NW_020110065v1 5186 16 + 13513 CAGAACGATACAGGAC s phaLep1.KK448170 3163 16 - 4282 TACCTCGACCCTAGAC i phaLep1.KK448170 C 0 N 0 a score=320.000000 s galGal6.chrUn_NW_020110065v1 8341 13 + 13513 tcccaattag-att s cotJap2.chr1 144434614 14 + 175656249 TCCCAATCACCACT i cotJap2.chr1 N 0 N 0 a score=28369.000000 s galGal6.chrUn_NW_020110065v1 8655 987 + 13513 acagtttctagtcaggccaaggtctctttgaagagcagtttgttccttattgcagGAATGGGCGCATGCCCCCTACTGATCAGGGAGAAATGATGCAACCAGTAGGTGAAATCCATTCCGTTATGCACCCTGGGTc-gacgcaggtaaagcctctcctggcactcattggttgagcatctcaggctcacagcCTTCTGACGCTGCTgctatgttacacttccatagcttcATTACACATCCATACCTCTGTTACACTTCCTTAGCTCCGTTACAATTCCATACcaagtctgttaccaacccattgtctttgggtatgttctggactttttataGCGATACGAGGACAATAGTGTCACTCGTT-----------------------TTGACTCTCACCT----------------TTaccctagtgcctgtgccaattctacctaGGTTGTAACTCCCCACTCTCAACTTTACTct-ttcagcaactttctttgggaaaggc-acttatcctgggctacatacagaaatactggaaatttccactgcaaaaacacaatctacctctcaca---------gagccactgccattggtgccatgaggcag---gagcagccgGGGGACAGCGAGACTGGGAACAGGAGTGGccggacagctgctgtcagttcccctttttagttaggatgatgtgatgtcacctcctgatgagg----------CGATATTAGCCcatctggatggttgcactggggtccctctggggtgggac------------------aagtggagaggtgcacactgcacactgtgactgttgaggtgccccacacgctctgcaccctgggctgtcacacactgtcccaaagggctgtgagtg--tgtcccctggcatggtgaCCCCAACTCACGCCagactctctgcacagtgccccagtagggcagtccgtgcttgcctgggctctccag-----gcaacagcgtc--agacagtgactcagaggaacaacagaagaccatttattgaactgtCCACCATCATCAATcaactgcactgcactgaaataAGGGGA s melGal5.chr1 120063686 1032 + 190651702 AAAATTTCTAATCAGGCAAAGATCTCTGTGAAGAgcattttattaattattacaGTAATGGATGCACACCCCCtactgacaagggagaaat--tgtAACTAGTTAGTGAAATCCACTC--TTATATACCCTGAGTCTGACGGAGGTAAAGCCTCTCCTGGCACTCACTGGTTGAGCGTCTCAGGCTCATAATCTTCTGACGCTGTTGCTACGTTACACTTCCATCGCTATGTTACACTTCCATAGCTACGTTATACTTCCATGGCTACGCTACACTTCCATACAATATCTGTTATCAACCCATTGTCTTTGGgtatgttctgtactttttgTGGAGATAGGAGGACAATATTTTCAACAATTAGCACACAAGTCCTGTCCTATACTGGACTCTCCCCTACCCCATATAACTGCCTTACCTT-GTGCCTGAGCCAATTTTACCCAGGTCAGAATGCCCTAGTCTCAACTTTACTCTGTTCAGCAACTTTCTTTGTGAAAGGCAACTTATTCCATGCTACATagagaaatactggaaatttcCATTGCAAAAATACAATCTACCTCTCACACCCTCCTATGTGCCTATGTCAAGGCATGTATGAGACAATGTGGTGATCCGAgg--cagccagcatggcttcaccaaggg-cagattgtgcctgaccaatctggtggctttctatgatgcagtgatggcatcagtggacaGGGGTAGGGagatggatgtca-tctacctggactttttcaagg-----cctttgacatggtccctcatTATATTCTTTCTAAAATTGAGAGGTATGGATTcgaaggatggactgttcagtggattAAGA------ACTGGCTGGCTGGTTGTA------GTCAAAGGGTTGCgattaatggttctgtgtcagggtg-----aaGGCTGGTCAGA----------AGTGCCCCTACGGGGTTGatcttg-ggaccggtgctcttcaacatctttatcagtgacatagacaATGGCATTGAGGGCactcagcaa---atttgcagatgacaccaagttgatCAGTACAGT-cgatacactggaaggaaggga i melGal5.chr1 N 0 N 0 a score=-23.000000 s galGal6.chrUn_NW_020110065v1 9880 2 + 13513 TT s mesUni1.JJRI01070886 535 2 + 2215 TG i mesUni1.JJRI01070886 N 0 I 315 a score=0.000000 s galGal6.chrUn_NW_020110065v1 9882 323 + 13513 GAGGGGAatcaggaaggatttgggggtgagaGAGGAGAATTCAGGGATTTGGTGGACTTTaaatgagatgagctgcacacgggaggatttggggatgtttgatTTTTTGGGATTTAGGGGTATAAGGATGGGATTGCTGTATCATGGAGCTCCAAGTGGGGAATTTGGGGTGTGTCCCATTCAGAGCgccttaaaaatgaagcactgtgGGTGTGGGGGTATCAGCAGGGgtcccccactgcccacatgggtgtagataatggggggcTGATGGATGGCCGGGGAGCAGGGGTCACAGCATGAATTTCGGCGTAGGTCAGACG e mesUni1.JJRI01070886 537 315 + 2215 I a score=38.000000 s galGal6.chrUn_NW_020110065v1 10205 3 + 13513 CTC s mesUni1.JJRI01070886 852 3 + 2215 TCC i mesUni1.JJRI01070886 I 315 N 0 a score=1149.000000 s galGal6.chrUn_NW_020110065v1 11078 475 + 13513 gagtgcagccacaaagcccctcaccagtgccatcaccagaTTGGCACAG--------GACTGCTCCACAGCACCTGTGGGTCCAGGTGTTTGGGTGTCCCTTGCCAGCCACAACCCCCa--------------tgcagactggatgcagagacacagccacCCATCCATGACGGGGGGCATG--CAAATGGGGGGTTCAGACCCA-----CCTgaggtgcagctgtgggtgtcacct--ccagcatcacgctgtccccaggggtgaggacacaaaggggTAACC-CCTGgggcgataggagcacctgtaggtg--------ccactgtcagctggggtcaccgcCAGGAAGGTAAACT--------TTGCAGCACCCCACCACTGGGGTC---CTGGTGCTTGATAggggctgagctcccatccttgtgcag-----gaggaaggtggccccgtagtccttgttccagcagcggatggtgatgTTGGTCCCCATCTCCACATGTTGCTCGGGGTGAATGGAAAT------GCTGGGT s allMis1.JH735850 83402 519 + 218810 GGGGGGAGCC-CAGAGCCGCACCCCTAAGCC-----TGGACTGGCTCAGACTGCCTGGACTGCCCCAAAGCTGTGAAGAGCCCAGGTGTCCGGGCGTCCAGCCCCCATCACAACCCTCGACACCCCTTCCTCTCGCAGTCTGGATCC---GACCCGGGCTCCGCCCCCCGAGGGGGGATGAGATCAGACACGGGACAGGGATAAAGAGGCCGTgcagcgcagcagaggcaggagctggaccagcagcagcgggagcCCCGGACCCAGCACCCCGAGAAGGGACCGCATAGGAAGCACAAGGTATGGGGGGGTGGGCCCGGATCTCTCCTAGTTGGGGTGTGGGGCTGGAGGGGAGAATGGGGGGGCTGGGAGC-CCGGGCGCCTGGCGTCCCTCCAGCGCCAGGAGGGGGCCGAGATC---TTGGGGTGCAGGGTTTGGAGCAGGGGGTGCTGGGCTCCC--TCCCGGCTTCGGGTCTGGCAACCTGCCCCAATCCCC---CGGTGCTCACGGCAAAGGGGGCTCGTCCGCCTGGGT i allMis1.JH735850 N 0 I 32 a score=0.000000 s galGal6.chrUn_NW_020110065v1 11553 9 + 13513 GGGGAATAA e allMis1.JH735850 83921 32 + 218810 I a score=-2955.000000 s galGal6.chrUn_NW_020110065v1 11562 872 + 13513 CTgtgatctgcatgagggaggggacagcagtgggacacggtcctgtggggagcagccagagccatttgctgtccccagtgtcct-cacctgtcagcaccagctccacggggtcactct-tctctgatgccCCTACTGACCAAGA-CAccggtactgacaccgataacgacctgcgtgttcccgcagtgtgctaacaaaggagaactcggccgcgtcctgctccttctccttccccttgttGTACGACCAACCTCtttcctggtacagccagacccagg---cagccagccggggcaggtggcagcgcagggtgacattgttcGCTAGGgaccccctgg---ctggggtgcagtgacagggagggtcggggc--actaggacaggggacagcagtcagccttgtccctgcacaccctcctg-------ggcccctctgctgg--ccccctgaccacactcccctccctctgtccccattctccccctgtccccatactcacgttgctgtgccctgctcgctgccaccagcgCCAACCTTGCat---------ggacacggtc----ctggtcccacacagggccac----caacccccgtggcaccacgtc--cccattgtcactcacccaggatgagggccaccaccattggtgccatgaggcaggagcagcttggggacaacGAGAATGCAGTGGGGACAAGGAGTGACCAgagaggcaatctcattt---------------cctctttgggGACGGGATGGAGACATGAAGTCTCCACCTCATGTGATAAATAGCCGTCATGTG-----TGGTGGCACTTTTGGTTTCCCAGTGACAAACagagagcactgcacagagcccccATTGCTGTGCCCCACGCAGGCTGT--CACCTCTCAAGTCCCCAAGGAGCCCCCATCATGTGGCCT-TG s allMis1.JH735850 83953 880 + 218810 ctctctctcCCCCGTAGCATGCTGCTGTCGAGGGCCCCGATCCTG------GCCGCCACCGTCTGCCTCCTCCTCCTGTGCCCCGCGGCCACCGCCACCAG--CCGGGGGGCCCCCCTGCCGCAGCCCCCCCCAGTGCCCCACACCACCTGGGAGGATTACGAGGACGAC---------ACCGC--TACGCCCACCACGCCCAGGCTGGGCCCGCCGAGCCGCTGCGACTACCAGCCCTGCCGCCACCTGCAGCCATCCTGCGCCGAGCTGCGCCAGGCCTCAGCCTGCCTCTGCCCAGGAC--TGTCGGGCGCCAGCGAGCCCCCCGATCCCCCGCGGCTCCTGGAGGCGGTGGTGGCGGCCGGCGGGGCCAGCCTGCACTGGTGCGCGCCCCCCTCCACCGTGCTGCGCTACCGCCTGCTGGCCTGGCCCCCCCATGGGCCCCCCCTGGCCA----GCCCTCCGCTCAACGCCAGCTTCCGCCGCGC--------CACGCTGGGGCCCCTGGCACCCGGCACCCGCTACCGCCTCTGCGTCGTGGCCGAGAACGCGGCCGGCGCCAGCTTCCAGCACGACGACGCTGCAGCCCCCGGTGGGCCCTGCCGGGCCGTGGACACCCCCCTCGGGCCCCAGCCACTGCTGT--ATGCCAC-------------CCTGGGGGTGGCCGCCTTGCTGGGGGGCCTCGGC---ACCAGTGCGCTGGTCTGGCGCTGGGCCCGCCACCGGCGGCCGTGGGGTCGGTCGGCACGGACGGGATCGCGGGATAATATCCTGGAGAGCGGTGCGGGGCTGGCTGGGGCCACCAACAGCGCCTATGGGAAGGAGGAGGACCTCTG---ATACCCCCCCCCCCCGTGTCCTCCCTGGACTGTGACACCCCCCTGGAGTCCTTGGTGTCCCCCCAATGTCTCCCATG i allMis1.JH735850 I 32 C 0 a score=499.000000 s galGal6.chrUn_NW_020110065v1 12434 19 + 13513 CACTCTG-TCCCCCATAGGA s balPav1.KL481927 27992 19 - 51548 CACTCCA-CCTCCACCAAGA i balPav1.KL481927 N 0 C 0 s allMis1.JH735850 84833 20 + 218810 GACTGTGATGCCCCCTTGGA i allMis1.JH735850 C 0 N 0 a score=1432.000000 s galGal6.chrUn_NW_020110065v1 12453 119 + 13513 TGCCAGACACACATACATGGCTCCAATGGGCTGTCCCACATGGCATGCCAcgtgcca---tccccagcacatccagcctgctgtcaccacGCACTTTGGGTAACACACTCTTTCCC----CAC-TGC s balPav1.KL481927 28011 118 - 51548 TGCAACACAGCCATACCTGGCTGCAAAGGGCTGCCCCTCGGAGCTTAGCATGGGGCAGCGTCCCCAGCAAACGCAGCTACAT---------CCCTTCCAGTCTTACCCAGCTCCCCGTGACATGTGC i balPav1.KL481927 C 0 I 27 a score=0.000000 s galGal6.chrUn_NW_020110065v1 12572 39 + 13513 ACTTTCCTCTGCCATcccactggggacagcagcacagac e balPav1.KL481927 28129 27 - 51548 I a score=735.000000 s galGal6.chrUn_NW_020110065v1 12611 15 + 13513 ctttgggggcacagt s balPav1.KL481927 28156 15 - 51548 CCCTGGGAGCCCAAT i balPav1.KL481927 I 27 N 0 a score=315.000000 s galGal6.chrUn_NW_020110065v1 12907 112 + 13513 ACTTGGCGATGGTGATGTTCA--TCCTGCACCCAGC-ATACATGTTTTTGTGCACTAATGCACCT-TGCACATGTGT---TGTGTGTAAGCATGGCCATGCACCG----CACTGGTTTTGTA-----G s halAlb1.KK649155 38502 127 + 42253 AATTGGCCAATGGGATCTTGAGTTCTTGAGGACAGAGAAACATATCTATATGTA-taatgtgtgtgtacatatatatacgTGCATGCATGCATAGGTTTGCATTAATTTCACCGCTTTTGGAAACCGG i halAlb1.KK649155 N 0 C 0 a score=521.000000 s galGal6.chrUn_NW_020110065v1 13019 13 + 13513 ATCTTTGGGTTGG s anaPla1.KB742439 9632 13 + 2713871 ACCTCTGTGCCTG i anaPla1.KB742439 N 0 C 0 s halAlb1.KK649155 38629 13 + 42253 ATTTCTAGCCTAA i halAlb1.KK649155 C 0 C 0 a score=356.000000 s galGal6.chrUn_NW_020110065v1 13032 4 + 13513 AGTG s anaPla1.KB742439 9645 4 + 2713871 AATG i anaPla1.KB742439 C 0 C 0 s phoRub1.JJRE01064278 2701 4 - 11758 AGCA i phoRub1.JJRE01064278 N 0 I 62 s halAlb1.KK649155 38642 4 + 42253 AAGA i halAlb1.KK649155 C 0 C 0 a score=-535.000000 s galGal6.chrUn_NW_020110065v1 13036 21 + 13513 GGCAATTTTG---------GTTGTCCCAGA s anaPla1.KB742439 9649 17 + 2713871 GAAAA----G---------Attctcctgga i anaPla1.KB742439 C 0 C 0 s halAlb1.KK649155 38646 30 + 42253 TAAAGTTTTGTTGTAAGTTGTTATTCCACA i halAlb1.KK649155 C 0 C 0 e phoRub1.JJRE01064278 2705 62 - 11758 I a score=667.000000 s galGal6.chrUn_NW_020110065v1 13057 2 + 13513 AG s anaPla1.KB742439 9666 2 + 2713871 ag i anaPla1.KB742439 C 0 C 0 s eurHel1.KK559637 16026 2 + 17272 GG i eurHel1.KK559637 N 0 N 0 s halAlb1.KK649155 38676 2 + 42253 GG i halAlb1.KK649155 C 0 C 0 e phoRub1.JJRE01064278 2705 62 - 11758 I a score=-346.000000 s galGal6.chrUn_NW_020110065v1 13059 19 + 13513 AATGGTGATGGAATTTTGG s anaPla1.KB742439 9668 19 + 2713871 caatgtcaaggaacatgca i anaPla1.KB742439 C 0 C 0 s halAlb1.KK649155 38678 15 + 42253 ----CTAAGAGAACTCAAG i halAlb1.KK649155 C 0 C 0 e phoRub1.JJRE01064278 2705 62 - 11758 I a score=180.000000 s galGal6.chrUn_NW_020110065v1 13078 1 + 13513 A s anaPla1.KB742439 9687 1 + 2713871 a i anaPla1.KB742439 C 0 C 0 s halAlb1.KK649155 38693 1 + 42253 G i halAlb1.KK649155 C 0 C 0 s acaChl1.KK841682 46941 1 - 91667 a i acaChl1.KK841682 N 0 C 0 e phoRub1.JJRE01064278 2705 62 - 11758 I a score=-553.000000 s galGal6.chrUn_NW_020110065v1 13079 3 + 13513 GTC s anaPla1.KB742439 9688 3 + 2713871 gac i anaPla1.KB742439 C 0 C 0 s phoRub1.JJRE01064278 2767 1 - 11758 G-- i phoRub1.JJRE01064278 I 62 I 62 s halAlb1.KK649155 38694 3 + 42253 GGC i halAlb1.KK649155 C 0 C 0 s acaChl1.KK841682 46942 3 - 91667 ggc i acaChl1.KK841682 C 0 C 0 a score=-4633.000000 s galGal6.chrUn_NW_020110065v1 13082 54 + 13513 --AC-----------------TTGGGAATAATTGGAGGTTCTCAACTGCTGGTAAGGAATTCATGGTGCGTAA s anaPla1.KB742439 9691 62 + 2713871 --aa---------agaggtcATTGGAGATAGCAAGCATGGCCTCACCAAGGGTAAATaatgcctgaccaatct i anaPla1.KB742439 C 0 C 0 s halAlb1.KK649155 38697 48 + 42253 ATATGGATGACAGGGAGGTGACTCAAGTCAGCCAACATGGGTTCACaa------------------------- i halAlb1.KK649155 C 0 C 0 s acaChl1.KK841682 46945 40 - 91667 acat--------gggAGGTGATTCAAGACAGTCAGCACGGCTGCACCA------------------------- i acaChl1.KK841682 C 0 C 0 e phoRub1.JJRE01064278 2768 62 - 11758 I a score=-3004.000000 s galGal6.chrUn_NW_020110065v1 13136 10 + 13513 -GGAAGaactt s anaPla1.KB742439 9753 10 + 2713871 -ggtaGCCTTC i anaPla1.KB742439 C 0 C 0 s phoRub1.JJRE01064278 2830 9 - 11758 -TAATGACCT- i phoRub1.JJRE01064278 I 62 I 70 s halAlb1.KK649155 38745 10 + 42253 agggcaaatt- i halAlb1.KK649155 C 0 C 0 s acaChl1.KK841682 46985 10 - 91667 AGAGCAAGTC- i acaChl1.KK841682 C 0 C 0 a score=-2777.000000 s galGal6.chrUn_NW_020110065v1 13146 23 + 13513 ------------tggggtgagaaatgagCCTTTGA- s anaPla1.KB742439 9763 7 + 2713871 ------------TAcaatg----------------- i anaPla1.KB742439 C 0 C 0 s halAlb1.KK649155 38755 28 + 42253 gtgcctgactaatctggtg--------gccttctac i halAlb1.KK649155 C 0 I 4 s acaChl1.KK841682 46995 28 - 91667 CTGTCTGACAAACCTAATG--------GCCTTCTAC i acaChl1.KK841682 C 0 I 4 e phoRub1.JJRE01064278 2839 70 - 11758 I a score=-2441.000000 s galGal6.chrUn_NW_020110065v1 13169 17 + 13513 GGGTAACTGATGTTATc s anaPla1.KB742439 9770 16 + 2713871 gagtgactg-catcacC i anaPla1.KB742439 C 0 I 3 s balPav1.KL478613 28651 7 + 84282 GGGACac---------- i balPav1.KL478613 N 0 C 0 s halAlb1.KK649155 38787 14 + 42253 GAGTGACTG-TGGTG-- i halAlb1.KK649155 I 4 I 11 s acaChl1.KK841682 47027 14 - 91667 Aagtgacta-catca-- i acaChl1.KK841682 I 4 N 0 e phoRub1.JJRE01064278 2839 70 - 11758 I a score=100.000000 s galGal6.chrUn_NW_020110065v1 13186 1 + 13513 c s anaPla1.KB742439 9789 1 + 2713871 C i anaPla1.KB742439 I 3 C 0 e halAlb1.KK649155 38801 11 + 42253 I e balPav1.KL478613 28658 0 + 84282 C e phoRub1.JJRE01064278 2839 70 - 11758 I a score=4665.000000 s galGal6.chrUn_NW_020110065v1 13187 19 + 13513 aaggg-----caactgatgtcatc s anaPla1.KB742439 9790 24 + 2713871 AAGGGAGGACCAATGGATGTCATC i anaPla1.KB742439 C 0 C 0 s tauEry1.KL459220 10400 19 - 88538 AAGgg-----caactgatgtcatc i tauEry1.KL459220 N 0 C 0 s phoRub1.JJRE01064278 2909 17 - 11758 gtgga-----caagggaaggaC-- i phoRub1.JJRE01064278 I 70 N 0 s balPav1.KL478613 28658 13 + 84282 -----------aactgatgtcatc i balPav1.KL478613 C 0 C 0 s halAlb1.KK649155 38812 19 + 42253 aagag-----caacagataTCACC i halAlb1.KK649155 I 11 C 0 a score=39282.000000 s galGal6.chrUn_NW_020110065v1 13206 71 + 13513 tacgtGGACTTCCACGATGTCTTTGACAAGGTCTCACACAACTCCCTCATccctaaattggagagatatgg s anaPla1.KB742439 9814 71 + 2713871 TGCCTGGACTTCTGCAAAGCCTTTGTCATGGTCCCACACAACATCCTGATCTCCAGAAATgagagatatgg i anaPla1.KB742439 C 0 C 0 s tauEry1.KL459220 10419 70 - 88538 tatTTGGACTTCTGTAAGGTCTTTGACATGGCCCCACACAACATTGTTGTTGCTAAATTGGAGAGAC-TGG i tauEry1.KL459220 C 0 N 0 s balPav1.KL478613 28671 71 + 84282 tatctTGACTTCTGTAATGCCTTTGACATGGTCCCACCCAACATCCTTATCgctaaattggagagatatgg i balPav1.KL478613 C 0 C 0 s halAlb1.KK649155 38831 71 + 42253 TGTCTTGACTTCTGTGAGGCCTTCGACAGGGTCCCATACAACATCCTTATtgctaaattggagagataaga i halAlb1.KK649155 C 0 C 0 a score=10675.000000 s galGal6.chrUn_NW_020110065v1 13277 70 + 13513 atatGAGCATTGGAGAGAAGGagttctggagagaaggaatttgttggaaggtcacagccagagggctgtg s anaPla1.KB742439 9885 64 + 2713871 atttgatggCTGGA------CCATTCAGTGGAGAAGGAATTGGCTTAAAGGTTGCACCCAGAGAACGGTG i anaPla1.KB742439 C 0 N 0 s balPav1.KL478613 28742 60 + 84282 gtTTGATGAATGGA------GTATTAGATACATAAGCAATTGGCTGGATGGCCGCAcccaaagagt---- i balPav1.KL478613 C 0 C 0 s halAlb1.KK649155 38902 60 + 42253 gtttgatggatgga------ctattTGATGGGTAAGGAATTGGCTGGGTGGCTGCATCCAAAGACT---- i halAlb1.KK649155 C 0 C 0 a score=5210.000000 s galGal6.chrUn_NW_020110065v1 13347 116 + 13513 acGGGATGGAGTGCAGCTGCAAACCCAGTGTGCACAAAAGGAGGTCTGAGGAGCACCTCCGAGGttgtcttcttca----tcttctttgtgGTCATCATTG--CGGTTTGCTTGTTGATGAC s balPav1.KL478613 28802 102 + 84282 -----------tgcagtcaatggctcaatgtcaATGTACAGAGGTGTG---------TaacaagtggtgttcctcaagGGTCTGTACTGGGATCAGTACTGTTCCATACCTTTATTAATGAC i balPav1.KL478613 C 0 N 0 s halAlb1.KK649155 38962 100 + 42253 -----------TAGAGTCAACGGCTTACTGTCCA--AATGGAGATCAG---------TAACAAGTGGTGTCCTTCAGGGGTCCGTATTGAGACTGGTactgttcaatatttttattaatgac i halAlb1.KK649155 C 0 C 0 a score=153.000000 s galGal6.chrUn_NW_020110065v1 13463 20 + 13513 TGTGACCTCCAGA-TGAGTGC s halAlb1.KK649155 39062 21 + 42253 actgacagtgggattgagtgc i halAlb1.KK649155 C 0 N 0 a score=100.000000 s galGal6.chrUn_NW_020110065v1 13487 1 + 13513 C s melGal5.chrZ 5396623 1 - 68461266 c i melGal5.chrZ N 0 N 0