##maf version=1 scoring=roast.v3.3 a score=2289.000000 s galGal6.chrUn_NW_020110134v1 12313 189 + 23766 gaaggcaaagggcggaggaggttagGGACTG--Gaagg--------gttttttaaaaataacaaaa----aaattgtgaa----------atgaggaagaaatgagCAAAT------------AATGC------------------------TATAATTATACATAATGGATTGCAA-----AATTTCATGAACGCAAATATGAAATTTTACTGTGTAGGAGTGTGTGCATGCCTCTGACTGTGATTGTGATCC s bucRhi1.KL531876 8270 252 + 42612 gaaggCTGAAGTGAACAGTGGTTTGagactgcagaagaaatctgaagttTCTTATGAGTAACAGACTGTTAGACCATGAATCTCAGATAAAAGAGGAAGTAAAGGTCAAATTAATTAGAACATAATGCATCAACGTGTAATTTTGTGCTGAATAAAAGCATACGTAGTTGCTGGCAACCTAAGTTTTCATGAATGCGTTTGTGAAACTTCACTGTGTTTAAGCCTGCATATTCTAATGA--GTGATTAAAATAC i bucRhi1.KL531876 N 0 I 4158 a score=0.000000 s galGal6.chrUn_NW_020110134v1 12502 350 + 23766 TGGgatggaagaaagaattttgCCAGTTTTAGGGAATTGATATTTTAGCTGTAGCCATGGAGAGCTTGTTTTGTGGAGAGAGCTGACCTGGTTGTTCATCTTGTTTGTgcaaagatttgttttgcttgcaggTGTTCCACTTTGGCTTTGTATGACACAGTGGACGAGAGGGGACGGCGTTCAGTGGAACAAACGCTGCAGACCCTGGGGAGAatcaaagcaggagagaggaaacgTGCCCTTTGCAGCAGGGGCCGTTGTGCTGGCATTGCCcatcgcatccactgctgctgtggtcctttctttcctttgggcaGTTTGCTGTCTCTCACGGGGTTGTCTACAATagg e bucRhi1.KL531876 8522 4158 + 42612 I a score=840.000000 s galGal6.chrUn_NW_020110134v1 12852 93 + 23766 tgtttgtttgtgtgtccGTGTG-----AGGC-----TGTTGAATAAAATTCCTAcctctgtgttctgctctgggtGCGTGGTTttcttgcctctgctcctgag s hg38.chr8 144600326 96 + 145138636 TGTGTACCTGAGTGTGCATGTGCGTGGAGGCATGCGTGCACACTTGGGTACCTACCTGCGTGTGTGGAGGCGTGTGTGTG-------CACTTGTGTACCTGAG i hg38.chr8 N 0 I 1348 e bucRhi1.KL531876 8522 4158 + 42612 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 12945 99 + 23766 gcATCCTGACTGTCGGATCCAAACGTACcctgggacagacagacagacagccagccaaggcaggcaggtgctgcgATGCCAAccgtccagccagccaag e hg38.chr8 144600422 1348 + 145138636 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=221.000000 s galGal6.chrUn_NW_020110134v1 13044 8 + 23766 gcaggcag s hg38.chr8 144601770 8 + 145138636 GCGTGGAG i hg38.chr8 I 1348 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-380.000000 s galGal6.chrUn_NW_020110134v1 13052 4 + 23766 --gcac s hg38.chr8 144601778 4 + 145138636 --GCAT i hg38.chr8 C 0 C 0 s xenTro9.chr6 125506596 4 - 135134832 GTGC-- i xenTro9.chr6 N 0 I 26 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-331.000000 s galGal6.chrUn_NW_020110134v1 13056 2 + 23766 gt s hg38.chr8 144601782 2 + 145138636 GC i hg38.chr8 C 0 C 0 s xenTro9.chr6 125506626 2 - 135134832 AA i xenTro9.chr6 I 26 C 0 s nanPar1.KN911321v1 2912 2 + 4697 GG i nanPar1.KN911321v1 N 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=2986.000000 s galGal6.chrUn_NW_020110134v1 13058 17 + 23766 gtgtgtg------tgtgtgtggg s hg38.chr8 144601784 23 + 145138636 GTGTGTGCTAATGTACCTGTGTG i hg38.chr8 C 0 C 0 s xenTro9.chr6 125506628 17 - 135134832 GTGTGTG------TGCATGCATG i xenTro9.chr6 C 0 C 0 s nanPar1.KN911321v1 2914 17 + 4697 GTGTATA------TAGATGGAGG i nanPar1.KN911321v1 C 0 C 0 s petMar3.PIZI01000011v1 4970900 16 + 16651794 gtgtata------tgtgtatag- i petMar3.PIZI01000011v1 N 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-3147.000000 s galGal6.chrUn_NW_020110134v1 13075 6 + 23766 tgtgcg-- s pelSin1.JH210540 148081 4 - 849802 GA--CA-- i pelSin1.JH210540 N 0 I 21 s hg38.chr8 144601807 4 + 145138636 --TGTG-- i hg38.chr8 C 0 I 2 s xenTro9.chr6 125506645 4 - 135134832 --TGTG-- i xenTro9.chr6 C 0 I 14 s nanPar1.KN911321v1 2931 4 + 4697 --TATA-- i nanPar1.KN911321v1 C 0 C 0 s petMar3.PIZI01000011v1 4970916 6 + 16651794 --tgtata i petMar3.PIZI01000011v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-4736.000000 s galGal6.chrUn_NW_020110134v1 13081 21 + 23766 ------CAAGGGTGGGGTTGCACATGT s hg38.chr8 144601813 21 + 145138636 ------TGGAGGCGTGTGTGCTCGTGT i hg38.chr8 I 2 I 1 s xenTro9.chr6 125506663 7 - 135134832 ------TAAATGT-------------- i xenTro9.chr6 I 14 I 1 s nanPar1.KN911321v1 2935 7 + 4697 ------CAgaggg-------------- i nanPar1.KN911321v1 C 0 I 1 s petMar3.PIZI01000011v1 4970922 27 + 16651794 gtagtgtagtgtagtgtatagtagtgt i petMar3.PIZI01000011v1 C 0 C 0 e pelSin1.JH210540 148085 21 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-3746.000000 s galGal6.chrUn_NW_020110134v1 13102 3 + 23766 TTT- s pelSin1.JH210540 148106 3 - 849802 aca- i pelSin1.JH210540 I 21 I 128 s hg38.chr8 144601835 3 + 145138636 CCT- i hg38.chr8 I 1 C 0 s xenTro9.chr6 125506671 1 - 135134832 --T- i xenTro9.chr6 I 1 I 2 s nanPar1.KN911321v1 2943 1 + 4697 --t- i nanPar1.KN911321v1 I 1 I 2 s petMar3.PIZI01000011v1 4970949 3 + 16651794 -ata i petMar3.PIZI01000011v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-16100.000000 s galGal6.chrUn_NW_020110134v1 13105 95 + 23766 --GTGTACACGTGGGTGCACAAGGG-------------GAGGGGTTACACAGCTGTGAGTAA-GCACATGGAGAGTATAAGGATGGAgttgcacacgtgtgtgt-gca--------aGGG-- s hg38.chr8 144601838 95 + 145138636 --GTGTGCATGTGCGTAGAGGTGTGTGT----------GCGAGCTCACGTACCTGTGTGT---GTCCATGGAG-GCGTGCATGTGCTCGTGTACCTGTGTGTGT-GCA--------TGGA-- i hg38.chr8 C 0 N 0 s xenTro9.chr6 125506674 72 - 135134832 --GCATGCATGTGTGTATTT---------------------------------------------GCATGTCCTTATTAAATGTGTGTGTTTGCATGTGTGTGC-TTGCCTGTCCCTAAA-- i xenTro9.chr6 I 2 I 6 s nanPar1.KN911321v1 2946 72 + 4697 --atatagatggaggtatataggag-------------gaggag-------------------gagcatacagt-----gaggaggaggtatacagaggGGTGT-CTA--------TAGA-- i nanPar1.KN911321v1 I 2 I 6 s petMar3.PIZI01000011v1 4970952 111 + 16651794 gtgtatgtagtagtgtatagtgtagtgtatagtgtatagtagtgtatagtagtgtagtgtagtgtatatgtagtgtatagtagtgttagtgta---gtgtatgtagtg--------tagtag i petMar3.PIZI01000011v1 C 0 C 0 e pelSin1.JH210540 148109 128 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-8172.000000 s galGal6.chrUn_NW_020110134v1 13200 48 + 23766 TTAACAAACTGGTGG--------GGTTGCGCA-GGTGCGTGCattcacagggc-tgtg- s hg38.chr9 72961282 45 - 138394717 TTCACAAGCCTGTGG-----------TGTGGA-AGT-CAGGCAACCACAGGGCACATG- i hg38.chr9 N 0 C 0 s xenTro9.chr6 125506752 56 - 135134832 TGCATGCATGTGTGTGCTTGTCTGTCCCTAAA-TGTGTGTGCATGCATGTGTG-TATT- i xenTro9.chr6 I 6 C 0 s nanPar1.KN911321v1 3024 44 + 4697 TATACAGAGGGGTGT------------CTATA-GATGGAGGTATACAGAGGGG-TGTC- i nanPar1.KN911321v1 I 6 C 0 s petMar3.PIZI01000011v1 4971063 49 + 16651794 tgtatagtgtagtgt---------atagtgtatagtgtgtgtaggtagtagtg-tagtg i petMar3.PIZI01000011v1 C 0 C 0 e pelSin1.JH210540 148109 128 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-296.000000 s galGal6.chrUn_NW_020110134v1 13248 4 + 23766 caaa s pelSin1.JH210540 148237 4 - 849802 CACA i pelSin1.JH210540 I 128 I 369 s hg38.chr9 72961327 4 - 138394717 CACC i hg38.chr9 C 0 C 0 s xenTro9.chr6 125506808 2 - 135134832 --TG i xenTro9.chr6 C 0 I 2 s nanPar1.KN911321v1 3068 2 + 4697 --TA i nanPar1.KN911321v1 C 0 C 0 s petMar3.PIZI01000011v1 4971112 4 + 16651794 tata i petMar3.PIZI01000011v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-25063.000000 s galGal6.chrUn_NW_020110134v1 13252 86 + 23766 gtGTTGGGGT--TGCACATGTGGG----TGAGTGCGCAAGGGCGGGGTGGTACAGGTTTGTGCACGCAAG-TCGTGA-----GTGCAAG-------GAAGGGTTG--- s hg38.chr9 72961331 102 - 138394717 TGCTGGGGGT-GTGCACACATGAACATATATGTATGCGGGTGAGCAGGTGTGCACGTCTGTGTGTGAGCA-GTGTGAACAT-GTGTATGTGTGTGTGAGCAGGTA--- i hg38.chr9 C 0 C 0 s xenTro9.chr6 125506812 69 - 135134832 ------------TGTCCTTAT-------TAAAtgtgtgtgtttgcatgtgtgtgcttgcctgtccctaaa--tgtgt-----gtgcatgcatgtg------------- i xenTro9.chr6 I 2 C 0 s nanPar1.KN911321v1 3070 23 + 4697 ----------------------------TAGATGGAGGTATACAGAGGGGT--------------------------------------------------------- i nanPar1.KN911321v1 C 0 C 0 s petMar3.PIZI01000011v1 4971116 96 + 16651794 --------gtagtgtatagtgtag----tatatagtagtgtatagtgtagtatagtgtagtgtatagtagtgtatgtatgtagtgtatagtagtgtagtgtagtgtag i petMar3.PIZI01000011v1 C 0 C 0 e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-1982.000000 s galGal6.chrUn_NW_020110134v1 13338 8 + 23766 CACACGTG-- s hg38.chr9 72961433 8 - 138394717 TGCACGTG-- i hg38.chr9 C 0 C 0 s xenTro9.chr6 125506881 8 - 135134832 tgtgcttg-- i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110502 8 - 120101378 cacacata-- i xenLae2.chr8L N 0 C 0 s nanPar1.KN911321v1 3093 1 + 4697 -------G-- i nanPar1.KN911321v1 C 0 C 0 s petMar3.PIZI01000011v1 4971212 8 + 16651794 --tgtatagt i petMar3.PIZI01000011v1 C 0 C 0 e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-9347.000000 s galGal6.chrUn_NW_020110134v1 13346 11 + 23766 CCTGTACGcag--------------- s hg38.chr9 72961441 10 - 138394717 CCTGTGT-GTG--------------- i hg38.chr9 C 0 C 0 s mm10.chr5 20199919 11 - 151834684 CCCGAGTCCTG--------------- i mm10.chr5 N 0 C 0 s xenTro9.chr6 125506889 11 - 135134832 tctgtccctaa--------------- i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110510 11 - 120101378 tacacacacac--------------- i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3094 11 + 4697 TCTATAGATGG--------------- i nanPar1.KN911321v1 C 0 C 0 s petMar3.PIZI01000011v1 4971220 24 + 16651794 --agtgtatagtgtagtgtatagtag i petMar3.PIZI01000011v1 C 0 N 0 e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-19173.000000 s galGal6.chrUn_NW_020110134v1 13357 53 + 23766 ggg-----tgtgcaaaggggtggggATGCACAAGTGT-GTGCATA-GAAGTGGTTTTGGG-------------- s hg38.chr9 72961451 48 - 138394717 AGAGCAGGTATGCATATATGTG------AGCAAATGT-GCACATG-AGTATG----TGTG-------------- i hg38.chr9 C 0 C 0 s mm10.chr5 20199930 42 - 151834684 CGA-----TATGCTTA---GTG-----AAACAGATACAGCACCTC-CACATG----TGTG-------------- i mm10.chr5 C 0 C 0 s xenTro9.chr6 125506900 50 - 135134832 atg-----tgtgtgcatgcatgtgtgtatttgcatgt-ccttattaaatgtg----tgtg-------------- i xenTro9.chr6 C 0 I 6 s xenLae2.chr8L 69110521 50 - 120101378 ata-----tacacacacactcacacacacacaaacat-atatatatagtaag----tgtC-------------- i xenLae2.chr8L C 0 I 6 s nanPar1.KN911321v1 3105 47 + 4697 AGG-----TATACAGAGGGGTGTCTATAGATGGAGGT-ATACA---GAGGGG----TGTC-------------- i nanPar1.KN911321v1 C 0 I 6 s petMar3.PIZI01000056v1 1324779 60 - 6220833 gag-----tgtgtgaatggatg--agtgaacgaatgt-atgtat--aactta----tttcgcaccgtacttagc i petMar3.PIZI01000056v1 N 0 C 0 e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=1458.000000 s galGal6.chrUn_NW_020110134v1 13410 2 + 23766 CA s carCri1.KK525596 269 2 - 791 CG i carCri1.KK525596 N 0 I 142 s hg38.chr9 72961499 2 - 138394717 CA i hg38.chr9 C 0 C 0 s mm10.chr5 20199972 2 - 151834684 CA i mm10.chr5 C 0 C 0 s xenTro9.chr6 125506956 2 - 135134832 tg i xenTro9.chr6 I 6 I 18 s xenLae2.chr8L 69110577 2 - 120101378 TG i xenLae2.chr8L I 6 I 6 s nanPar1.KN911321v1 3158 2 + 4697 TG i nanPar1.KN911321v1 I 6 I 8 s petMar3.PIZI01000056v1 1324839 2 - 6220833 ca i petMar3.PIZI01000056v1 C 0 C 0 e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-15272.000000 s galGal6.chrUn_NW_020110134v1 13412 23 + 23766 AG--GATGGGCTTGCAg---gtgtgtgc-- s hg38.chr9 72961501 23 - 138394717 TGGCAACAGGTGTGCA-----CATGTGT-- i hg38.chr9 C 0 C 0 s mm10.chr5 20199974 20 - 151834684 ----GACACGAGGACA----TTGTCTGT-- i mm10.chr5 C 0 C 0 s xenTro9.chr6 125506976 23 - 135134832 --taaatgtgtgtgtgt---gtgtgtgt-- i xenTro9.chr6 I 18 C 0 s xenLae2.chr8L 69110585 23 - 120101378 --TAGGTAGGTGCCAGT---GTTTGTGG-- i xenLae2.chr8L I 6 C 0 s nanPar1.KN911321v1 3168 23 + 4697 --CAGAGGGGTGTCTAT---AGATGGAG-- i nanPar1.KN911321v1 I 8 C 0 s petMar3.PIZI01000056v1 1324841 24 - 6220833 ------accgtgctaatcggaggtgtgttg i petMar3.PIZI01000056v1 C 0 C 0 e carCri1.KK525596 271 142 - 791 I e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=2931.000000 s galGal6.chrUn_NW_020110134v1 13435 17 + 23766 --gtgcacgtgggt------gtgtg s hg38.chr9 72961524 17 - 138394717 --ATGCATGTGGGC------ATGTG i hg38.chr9 C 0 I 11 s mm10.chr5 20199994 17 - 151834684 --ATGCGTGTGAGA------GTGGA i mm10.chr5 C 0 I 13 s xenTro9.chr6 125506999 23 - 135134832 --gtgcttgtctgtccctaagtgtg i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110608 17 - 120101378 --GTGCCAGTCTGT------AGGTG i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3191 17 + 4697 --GTATACAGAGGG------GTGTC i nanPar1.KN911321v1 C 0 C 0 s gasAcu1.chrXIV 1557094 17 - 15246461 --GTACACgtgtgt------gtgtg i gasAcu1.chrXIV N 0 C 0 s petMar3.PIZI01000056v1 1324865 17 - 6220833 ttgtgatctggaGT------GTG-- i petMar3.PIZI01000056v1 C 0 C 0 e carCri1.KK525596 271 142 - 791 I e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-443.000000 s galGal6.chrUn_NW_020110134v1 13452 2 + 23766 ca s anaPla1.KB742556 3033 2 + 616817 Ca i anaPla1.KB742556 N 0 I 41 s hg38.chr9 72961552 2 - 138394717 CT i hg38.chr9 I 11 C 0 s mm10.chr5 20200024 2 - 151834684 CT i mm10.chr5 I 13 C 0 s xenTro9.chr6 125507022 2 - 135134832 tg i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110625 2 - 120101378 CC i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3208 2 + 4697 TA i nanPar1.KN911321v1 C 0 C 0 e gasAcu1.chrXIV 1557111 0 - 15246461 C e carCri1.KK525596 271 142 - 791 I e pelSin1.JH210540 148241 369 - 849802 I e petMar3.PIZI01000056v1 1324882 0 - 6220833 C e bucRhi1.KL531876 8522 4158 + 42612 I a score=-21613.000000 s galGal6.chrUn_NW_020110134v1 13454 34 + 23766 agg-------------gtcgatttagacgtgtgtgtgc--acggttgtg s hg38.chr9 72961554 49 - 138394717 GAGTGTGAGCAAGTGTGCACATGTGTATGTGTGCATGTGAACAGATGTG i hg38.chr9 C 0 C 0 s mm10.chr5 20200026 36 - 151834684 GGG-------------GCTCATGTATACATGTGAGTGGCAAGGCCTGTG i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507024 34 - 135134832 -------------tgcatgcatgcatgtgtgtgcttgcctgtcccta-- i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110627 34 - 120101378 -------------AGTATGTGGGTATATAGGTAGGTGCCAGTCTGTG-- i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3210 26 + 4697 -------------TAGATGGAGGTATACAGAGGGGTGTC---------- i nanPar1.KN911321v1 C 0 C 0 s gasAcu1.chrXIV 1557111 28 - 15246461 -----------tctgtctgtgtgtgtgtgtgtgtctgtc---------- i gasAcu1.chrXIV C 0 C 0 s petMar3.PIZI01000056v1 1324882 28 - 6220833 ------------GTGAACGAGCG-GGGCGAGTGTGTGACAC-------- i petMar3.PIZI01000056v1 C 0 C 0 e anaPla1.KB742556 3035 41 + 616817 I e carCri1.KK525596 271 142 - 791 I e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-4503.000000 s galGal6.chrUn_NW_020110134v1 13488 5 + 23766 caAAG s phaLep1.KK451546 4087 5 - 5434 CAACA i phaLep1.KK451546 N 0 C 0 s hg38.chr9 72961603 3 - 138394717 CAC-- i hg38.chr9 C 0 C 0 s xenTro9.chr6 125507058 4 - 135134832 -aatg i xenTro9.chr6 C 0 I 1 s xenLae2.chr8L 69110661 4 - 120101378 -AATG i xenLae2.chr8L C 0 I 1 s gasAcu1.chrXIV 1557139 2 - 15246461 ---tg i gasAcu1.chrXIV C 0 I 3 s petMar3.PIZI01000056v1 1324910 3 - 6220833 -AAT- i petMar3.PIZI01000056v1 C 0 C 0 e anaPla1.KB742556 3035 41 + 616817 I e carCri1.KK525596 271 142 - 791 I e mm10.chr5 20200062 0 - 151834684 C e pelSin1.JH210540 148241 369 - 849802 I e nanPar1.KN911321v1 3236 0 + 4697 C e bucRhi1.KL531876 8522 4158 + 42612 I a score=545.000000 s galGal6.chrUn_NW_020110134v1 13493 2 + 23766 GG s anaPla1.KB742556 3076 2 + 616817 tg i anaPla1.KB742556 I 41 C 0 s phaLep1.KK451546 4092 2 - 5434 CA i phaLep1.KK451546 C 0 I 86 s xenTro9.chr6 125507063 1 - 135134832 -g i xenTro9.chr6 I 1 I 1 s xenLae2.chr8L 69110666 1 - 120101378 -G i xenLae2.chr8L I 1 I 1 s gasAcu1.chrXIV 1557144 1 - 15246461 -g i gasAcu1.chrXIV I 3 I 5 s petMar3.PIZI01000056v1 1324913 2 - 6220833 GG i petMar3.PIZI01000056v1 C 0 C 0 e carCri1.KK525596 271 142 - 791 I e mm10.chr5 20200062 0 - 151834684 C e pelSin1.JH210540 148241 369 - 849802 I e nanPar1.KN911321v1 3236 0 + 4697 C e hg38.chr9 72961606 0 - 138394717 C e bucRhi1.KL531876 8522 4158 + 42612 I a score=-4188.000000 s galGal6.chrUn_NW_020110134v1 13495 15 + 23766 GTGGGAGTGCAGGTG s anaPla1.KB742556 3078 12 + 616817 ctgtgtgcacag--- i anaPla1.KB742556 C 0 C 0 s hg38.chr9 72961606 13 - 138394717 GTGTGAGAGCAGG-- i hg38.chr9 C 0 C 0 s mm10.chr5 20200062 2 - 151834684 -----------AG-- i mm10.chr5 C 0 C 0 s gasAcu1.chrXIV 1557150 11 - 15246461 gtgtctgtgtg---- i gasAcu1.chrXIV I 5 C 0 s petMar3.PIZI01000056v1 1324915 13 - 6220833 GTGGGTGCGGACG-- i petMar3.PIZI01000056v1 C 0 C 0 e phaLep1.KK451546 4094 86 - 5434 I e carCri1.KK525596 271 142 - 791 I e xenLae2.chr8L 69110667 1 - 120101378 I e pelSin1.JH210540 148241 369 - 849802 I e nanPar1.KN911321v1 3236 0 + 4697 C e xenTro9.chr6 125507064 1 - 135134832 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-62582.000000 s galGal6.chrUn_NW_020110134v1 13510 67 + 23766 CGTATGAGCA-TGTGGGAAGTGTGTGA-----ACAAGGTGG-------CA--CA---------TGTGTGTGTTTGCCCAGGGGAGCTCAAA s anaPla1.KB742556 3090 63 + 616817 ----tgggcagtgtagg---tgtgtgt-----acacaTTAG-------CAACCA---------TTCAGGTGTTTCCATACCAGGATGTACA i anaPla1.KB742556 C 0 C 0 s hg38.chr9 72961619 62 - 138394717 ----TGTGCA-TATGTG---TGTGTGAGA---GCAGGTGTG-------CA--CG---------TGTCTGTGTGTGAGCAGTTGTGCGCGTG i hg38.chr9 C 0 C 0 s mm10.chr5 20200064 63 - 151834684 ----TGTACA-TGAGTG---CACGAGAGGGCTGCAGGAATG-------TA--AG---------ATGCTGTGAGTGTACATGTGTGCACG-- i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507065 57 - 135134832 ---gtgtgca-tgcatg---tgtgt-------gcttgtctg-------tc--cc---------taagtgt--gtgtgcatgcatgtgtgtg i xenTro9.chr6 I 1 I 14 s xenLae2.chr8L 69110668 53 - 120101378 ---CTGTAGG-TGCCAG---TATGT-------G------GG-------TA--TG---------TAAGTGTCAGAGTGCAGGAATGTTGGTA i xenLae2.chr8L I 1 I 6 s nanPar1.KN911321v1 3236 58 + 4697 ----TATAGA-TGGAGG---TATAC-------AGAGGGGTG-------TC--TA---------TAGATGGAGGTATACAGAGGGGTGTCTA i nanPar1.KN911321v1 C 0 I 2 s oryLat2.scaffold1775 15446 65 + 22015 --------CA-TGCAAG---TATGTGACT---GCATCACTGCTGCGGCTG--CA---------TGTCTATGGCTGCACGTCTGCGTCTGCA i oryLat2.scaffold1775 N 0 C 0 s gasAcu1.chrXIV 1557161 73 - 15246461 --------tg-tgtgtg---tgtgtgtAA---ACAACAGAG-TGACACTG--CACTCGTCCACTTTCTCTCTCTCCCTTTTTCCTTCTGTC i gasAcu1.chrXIV C 0 C 0 s petMar3.PIZI01000056v1 1324928 60 - 6220833 ----TGTTTG-Aaaggg---tgggtg------atgagtggg-------tg--tg--------gtgcgtgtgaatgcgtgagtgagtaagcg i petMar3.PIZI01000056v1 C 0 C 0 e phaLep1.KK451546 4094 86 - 5434 I e carCri1.KK525596 271 142 - 791 I e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-2096.000000 s galGal6.chrUn_NW_020110134v1 13577 3 + 23766 AGT s anaPla1.KB742556 3153 3 + 616817 TGC i anaPla1.KB742556 C 0 C 0 s phaLep1.KK451546 4180 3 - 5434 TGC i phaLep1.KK451546 I 86 N 0 s hg38.chr9 72961681 3 - 138394717 TAT i hg38.chr9 C 0 C 0 s mm10.chr5 20200127 1 - 151834684 --A i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507136 3 - 135134832 aat i xenTro9.chr6 I 14 C 0 s xenLae2.chr8L 69110727 3 - 120101378 AGT i xenLae2.chr8L I 6 C 0 s nanPar1.KN911321v1 3296 3 + 4697 GAT i nanPar1.KN911321v1 I 2 C 0 s oryLat2.scaffold1775 15511 3 + 22015 CAT i oryLat2.scaffold1775 C 0 I 2 s gasAcu1.chrXIV 1557234 3 - 15246461 GGA i gasAcu1.chrXIV C 0 I 2 s petMar3.PIZI01000056v1 1324988 3 - 6220833 agt i petMar3.PIZI01000056v1 C 0 C 0 e carCri1.KK525596 271 142 - 791 I e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-4973.000000 s galGal6.chrUn_NW_020110134v1 13580 4 + 23766 GTGG s anaPla1.KB742556 3156 4 + 616817 ACAG i anaPla1.KB742556 C 0 C 0 s hg38.chr9 72961684 4 - 138394717 GTGG i hg38.chr9 C 0 C 0 s mm10.chr5 20200128 4 - 151834684 GAGG i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507139 4 - 135134832 gtgt i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110730 4 - 120101378 GTGT i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3299 4 + 4697 GGAG i nanPar1.KN911321v1 C 0 C 0 s oryLat2.scaffold1775 15516 2 + 22015 GT-- i oryLat2.scaffold1775 I 2 C 0 s gasAcu1.chrXIV 1557239 2 - 15246461 GA-- i gasAcu1.chrXIV I 2 C 0 s petMar3.PIZI01000056v1 1324991 4 - 6220833 gtat i petMar3.PIZI01000056v1 C 0 C 0 e carCri1.KK525596 271 142 - 791 I e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-24179.000000 s galGal6.chrUn_NW_020110134v1 13584 9 + 23766 GGT---TGCACA s anaPla1.KB742556 3160 6 + 616817 GGG------GTA i anaPla1.KB742556 C 0 C 0 s carCri1.KK525596 413 4 - 791 --------AGCA i carCri1.KK525596 I 142 I 38 s hg38.chr9 72961688 11 - 138394717 -GCAATTGTGCA i hg38.chr9 C 0 I 2 s mm10.chr5 20200132 6 - 151834684 -GC-----TGCA i mm10.chr5 C 0 I 2 s xenTro9.chr6 125507143 5 - 135134832 -------gtgtg i xenTro9.chr6 C 0 I 16 s xenLae2.chr8L 69110734 5 - 120101378 -------GGGTA i xenLae2.chr8L C 0 I 16 s nanPar1.KN911321v1 3303 5 + 4697 -------GTATA i nanPar1.KN911321v1 C 0 I 16 s oryLat2.scaffold1775 15518 7 + 22015 -----GGCTGCA i oryLat2.scaffold1775 C 0 I 14 s gasAcu1.chrXIV 1557241 7 - 15246461 -----AGCTCCG i gasAcu1.chrXIV C 0 I 45 s petMar3.PIZI01000056v1 1324995 7 - 6220833 -----tgttgtg i petMar3.PIZI01000056v1 C 0 C 0 e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-36935.000000 s galGal6.chrUn_NW_020110134v1 13593 32 + 23766 ---CGTGCATG----TGTAATCGGATGTCTTC------------TTCAAGA s anaPla1.KB742556 3166 44 + 616817 ---TGTCCAAT----TCCAACCGGATGTTTACATATATGATAACTGTAAAG i anaPla1.KB742556 C 0 C 0 s hg38.chr9 72961701 20 - 138394717 ---TGTGTATG----TATGTGTGGGCA------------------------ i hg38.chr9 I 2 C 0 s mm10.chr5 20200140 24 - 151834684 ---AATGTAGGATGCTGTGAGTGTACA------------------------ i mm10.chr5 I 2 C 0 s xenTro9.chr6 125507164 20 - 135134832 ---tgtgcttg----tctgtccctaag------------------------ i xenTro9.chr6 I 16 C 0 s xenLae2.chr8L 69110755 20 - 120101378 ---TGTGTTAG----TATATAGGTAGG------------------------ i xenLae2.chr8L I 16 C 0 s nanPar1.KN911321v1 3324 20 + 4697 ---GATGGAGG----TATACAGAGGGG------------------------ i nanPar1.KN911321v1 I 16 C 0 s oryLat2.scaffold1775 15539 20 + 22015 ---CGTCTATG----GCTGCATGTCTG------------------------ i oryLat2.scaffold1775 I 14 C 0 s gasAcu1.chrXIV 1557293 20 - 15246461 ---AATCAGCA----GCTTCCTGCGTG------------------------ i gasAcu1.chrXIV I 45 C 0 s petMar3.PIZI01000056v1 1325002 22 - 6220833 atctgcagtgt----ggtggcggcgt------------------------- i petMar3.PIZI01000056v1 C 0 C 0 e carCri1.KK525596 417 38 - 791 I e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-7689.000000 s galGal6.chrUn_NW_020110134v1 13625 2 + 23766 TA- s anaPla1.KB742556 3210 2 + 616817 TT- i anaPla1.KB742556 C 0 C 0 s carCri1.KK525596 455 1 - 791 C-- i carCri1.KK525596 I 38 I 170 s hg38.chr9 72961721 1 - 138394717 -T- i hg38.chr9 C 0 I 3 s mm10.chr5 20200164 1 - 151834684 -T- i mm10.chr5 C 0 I 3 s xenTro9.chr6 125507184 1 - 135134832 -t- i xenTro9.chr6 C 0 I 1 s xenLae2.chr8L 69110775 1 - 120101378 -T- i xenLae2.chr8L C 0 I 5 s nanPar1.KN911321v1 3344 1 + 4697 -T- i nanPar1.KN911321v1 C 0 I 1 s oryLat2.scaffold1775 15559 1 + 22015 -C- i oryLat2.scaffold1775 C 0 I 5 s gasAcu1.chrXIV 1557313 1 - 15246461 -T- i gasAcu1.chrXIV C 0 I 5 s petMar3.PIZI01000056v1 1325024 2 - 6220833 -tg i petMar3.PIZI01000056v1 C 0 C 0 e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-99712.000000 s galGal6.chrUn_NW_020110134v1 13627 78 + 23766 TTTGCCCA------------TGCATGTGCAAA--GGAA--------TGGGGTTGCATATGCTTGTGAAAGCAAACGA----------------------GGGTGTGCAA--AGGGGT--CTGG----CTG s anaPla1.KB742556 3212 78 + 616817 ATCATATA------------TGTAAGTACACA--GGAC--------TATGTGCCAGTACACTGTAGCATATAACCAA----------------------TTGGGTGCAT--ATGAAC--CAAT----GGG i anaPla1.KB742556 C 0 C 0 s hg38.chr9 72961725 73 - 138394717 TGCACATG------------TGTCTGTGTGTC--AGCA--------GGTGTGCATATGTCTGTGTGCATGTGA---------------------------GATGTGCAT--GAGTGT--GGGG----GCA i hg38.chr9 I 3 I 1 s mm10.chr5 20200168 82 - 151834684 TGCACGAGAG-------GGCTGCAGGAATATA--AGAT--------GCTGTGAGTGTACATGCGTGCAGGAGA---------------------------AGGCTGCAG--GAATGT--AAGATGCTGTG i mm10.chr5 I 3 I 1 s xenTro9.chr6 125507186 82 - 135134832 tgtgtgca------------tgcatgtgtgtgcttgcctgtccctaaatgtgtgtgtgggcatgcatgtgctt----------------------------gtctgtcc--ctaagt--gtgt----gtg i xenTro9.chr6 I 1 I 9 s xenLae2.chr8L 69110781 74 - 120101378 TCTGTGAA------------TGCAACTGTAGG--TGCC--------AGTGTGTGGGTATGTAGGTATGTGCCA----------------------------GTGTGTTG--GTATATAGGTAG----GTG i xenLae2.chr8L I 5 I 9 s nanPar1.KN911321v1 3346 72 + 4697 TCTATAGA------------TGGAGGTATACA--GAGG--------GGTGTCTATAGATGGAGGTATACAGAG----------------------------GGGTGTCT--ATAGAT--GGAG----GTA i nanPar1.KN911321v1 I 1 C 0 s oryLat2.scaffold1775 15565 68 + 22015 CACGTCTA------------TGGCTGCACGTC--TGCG--------GCTGCACATCTGTGGCTACATGTCTGC----------------------------GGCTGCAC--ATCTAT--TGC-------- i oryLat2.scaffold1775 I 5 C 0 s gasAcu1.chrXIV 1557319 70 - 15246461 ACTGTTTG------------TGTGTGTGTGTC--TCCT--------ATTGCAtgtgtgtgtgagagtgtgtcc----------------------------cactgcacgtgtttgt--gtg-------- i gasAcu1.chrXIV I 5 C 0 s petMar3.PIZI01000056v1 1325026 91 - 6220833 ---------gttgaacagtgtggatGGGATGA--AGCA--------GTCGACAACATAGGCGGAAGAATCAAATTAATGAAGTAAACAGCATcacgcatttgtctcccc--a------------------ i petMar3.PIZI01000056v1 C 0 C 0 e carCri1.KK525596 456 170 - 791 I e pelSin1.JH210540 148241 369 - 849802 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=2800.000000 s galGal6.chrUn_NW_020110134v1 13705 1 + 23766 G s anaPla1.KB742556 3290 1 + 616817 G i anaPla1.KB742556 C 0 C 0 s pelSin1.JH210540 148610 1 - 849802 G i pelSin1.JH210540 I 369 N 0 s hg38.chr9 72961799 1 - 138394717 G i hg38.chr9 I 1 C 0 s mm10.chr5 20200251 1 - 151834684 G i mm10.chr5 I 1 C 0 s xenTro9.chr6 125507277 1 - 135134832 g i xenTro9.chr6 I 9 C 0 s xenLae2.chr8L 69110864 1 - 120101378 G i xenLae2.chr8L I 9 I 2 s petMar3.PIZI01000056v1 1325117 1 - 6220833 g i petMar3.PIZI01000056v1 C 0 C 0 e oryLat2.scaffold1775 15633 0 + 22015 C e gasAcu1.chrXIV 1557389 0 - 15246461 C e carCri1.KK525596 456 170 - 791 I e nanPar1.KN911321v1 3418 0 + 4697 C e bucRhi1.KL531876 8522 4158 + 42612 I a score=1058.000000 s galGal6.chrUn_NW_020110134v1 13706 4 + 23766 -TGCA s anaPla1.KB742556 3291 4 + 616817 -TGCA i anaPla1.KB742556 C 0 N 0 s hg38.chr9 72961800 4 - 138394717 -TGTG i hg38.chr9 C 0 C 0 s mm10.chr5 20200252 4 - 151834684 -TGTA i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507278 4 - 135134832 -tgtg i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110867 4 - 120101378 -TGCG i xenLae2.chr8L I 2 C 0 s nanPar1.KN911321v1 3418 4 + 4697 -TACA i nanPar1.KN911321v1 C 0 C 0 s petMar3.PIZI01000056v1 1325118 4 - 6220833 tggc- i petMar3.PIZI01000056v1 C 0 C 0 e oryLat2.scaffold1775 15633 0 + 22015 C e gasAcu1.chrXIV 1557389 0 - 15246461 C e carCri1.KK525596 456 170 - 791 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-948.000000 s galGal6.chrUn_NW_020110134v1 13710 2 + 23766 CA s hg38.chr9 72961804 2 - 138394717 CA i hg38.chr9 C 0 C 0 s mm10.chr5 20200256 2 - 151834684 CA i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507282 2 - 135134832 cc i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110871 2 - 120101378 AC i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3422 2 + 4697 GA i nanPar1.KN911321v1 C 0 C 0 s petMar3.PIZI01000056v1 1325122 2 - 6220833 ga i petMar3.PIZI01000056v1 C 0 C 0 e oryLat2.scaffold1775 15633 0 + 22015 C e gasAcu1.chrXIV 1557389 0 - 15246461 C e carCri1.KK525596 456 170 - 791 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-99430.000000 s galGal6.chrUn_NW_020110134v1 13712 80 + 23766 TGGGTG----TC-TGTG-------CATGGAGGTAGACA---GAAGGTTG------CATAC-A-------TGTACGTGTGCACAG-------------TGCT----ATGCAAATGGATG-------GGGTTACa s hg38.chr9 72961806 75 - 138394717 CGTGTG----TA-TGTG-------------TGTAAGCA---GGTG--TG------CATGT-G-------TGTTTGTGTGAGCAG---------------------GTGTGCATGTGTGTGGGGCAGCTGTACA i hg38.chr9 C 0 C 0 s mm10.chr5 20200258 115 - 151834684 TGAGTG----CA-TGAGAGGGATGCAGGAATGTAAGAT---GCTG--TGATTGTACATGA-G-------TGCACGAGAGGGCTGCAGGAATGTAAGATGCTGTGAGTGTACATGCGTGCACGAGAGGGCTGCA i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507284 76 - 135134832 tgcgtgtcccta-aatg-------tgtgtgcctg-------tctg--tc------cctaa-a-------tgtgtgtgtgTGCAT-------------------GTGTGTGCCTGCATG-------TCCCTAAA i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110873 74 - 120101378 TAggtg----ca-agtg-------tgtgggtatgtaga---tctg--tg------cc--a-g-------tgtgtgggtatgtag-------------------gtatgtgccagtgtg-------ttggtatA i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3424 80 + 4697 GGGGTGTCTATA-GATG-------GAGGTATACAGAGG---GGTG--TC------TATAG-A-------TGGAGGTATACAGAG-------------------GGGTGTCTATAGATG-------GAGGTATA i nanPar1.KN911321v1 C 0 C 0 s oryLat2.scaffold1775 15633 74 + 22015 TGCATGTCTGCG-GCTG-------CACGTCTATGGCTG---CATG--TC------TGCGA-C-------TGCACGTCTATGGCT-------------------GCATGTCTGCAGCTGCA------------- i oryLat2.scaffold1775 C 0 N 0 s gasAcu1.chrXIV 1557389 75 - 15246461 tgtgtgtctcct-attg-------cacgtgtgtgtgag---agtg--tg------tcccacc-------tgcatgtgtgtgtga-------------------gagagtgtcccactgca------------- i gasAcu1.chrXIV C 0 I 12 s danRer11.chr13 376105 46 - 52186027 TGTGTGTC--------------------TGTGTGAGAGAAACACG--TG------TGCAA-G-------TATATGTGCATGA--------------------------------------------------- i danRer11.chr13 N 0 C 0 s petMar3.PIZI01000056v1 1325124 82 - 6220833 ----tgtttacacaccg-------cacgagggtactca---ttta--ag------gccga-agtCGACCTGTAGGGGCGGGGCC-------CACCGATTCTCGAAGCGCACC--------------------- i petMar3.PIZI01000056v1 C 0 C 0 e carCri1.KK525596 456 170 - 791 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-3101.000000 s galGal6.chrUn_NW_020110134v1 13792 4 + 23766 caag s hg38.chr9 72961881 4 - 138394717 TGTG i hg38.chr9 C 0 C 0 s mm10.chr5 20200373 4 - 151834684 GGAA i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507360 3 - 135134832 T-GG i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110947 4 - 120101378 TAGG i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3504 4 + 4697 CAGA i nanPar1.KN911321v1 C 0 C 0 s oryLat2.scaffold3559 6441 4 + 8366 CATG i oryLat2.scaffold3559 N 0 C 0 s gasAcu1.chrXIV 1557476 4 - 15246461 tgtg i gasAcu1.chrXIV I 12 C 0 s danRer11.chr13 376151 4 - 52186027 CACg i danRer11.chr13 C 0 C 0 s petMar3.PIZI01000056v1 1325206 4 - 6220833 CACG i petMar3.PIZI01000056v1 C 0 C 0 e carCri1.KK525596 456 170 - 791 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-1879.000000 s galGal6.chrUn_NW_020110134v1 13796 2 + 23766 -tg s carCri1.KK525596 626 2 - 791 -CA i carCri1.KK525596 I 170 I 53 s hg38.chr9 72961885 2 - 138394717 -TG i hg38.chr9 C 0 C 0 s mm10.chr5 20200377 2 - 151834684 -TG i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507363 2 - 135134832 -TG i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110951 2 - 120101378 -TA i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3508 2 + 4697 -GG i nanPar1.KN911321v1 C 0 C 0 s oryLat2.scaffold3559 6445 2 + 8366 -GG i oryLat2.scaffold3559 C 0 C 0 s gasAcu1.chrXIV 1557480 2 - 15246461 -tg i gasAcu1.chrXIV C 0 C 0 s danRer11.chr13 376155 2 - 52186027 -tg i danRer11.chr13 C 0 C 0 s petMar3.PIZI01000056v1 1325210 2 - 6220833 TT- i petMar3.PIZI01000056v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-69913.000000 s galGal6.chrUn_NW_020110134v1 13798 66 + 23766 tgtg----catgcacgtgTT----TGTGTGCAAGG----AG---GGA---------CTT-----------GCATGTG---TGCGTGCTCAGGGGT--GTGCAAAGA s hg38.chr9 72961887 60 - 138394717 TTTG----TGTGAGCAGGTG----TGCATGTGTGT----GG---GGG---------CAG----------------------GTGTACACATGTGTAAGTATGTGAA i hg38.chr9 C 0 C 0 s mm10.chr5 20200379 81 - 151834684 TCGGATGCTGTGAGTGTACA----TGCGTGCACGA----GA---GGG---------CTGCAGGAATGTAAGATGCTG---TGAGTGTACATGCGT--GCACGAGAG i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507365 60 - 135134832 --------TGTGCCTGTCTGTCTCTAAATGTGTGT----GT---GTG---------TGC-----------ATGTGTG---TGCCTGCAT--------GTCCCTAAA i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69110953 62 - 120101378 --------GGTGCCAGTCTG----TGAATGTGTCT----GT---ATG---------TGC-----------CAGTATG---TGGGTATATAGGTAG--GTGCCAGTC i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3510 62 + 4697 --------GGTGTCTATAGA----TGGAGGTATACAGAGGG---GTG---------TCT-----------ATAGATG---GAGGTATACAGAGGG--GTGTC---- i nanPar1.KN911321v1 C 0 C 0 s oryLat2.scaffold3559 6447 54 + 8366 ----------TGCGTCTGCA----TGACTGCGTCT----GC---ATG-------ACTGC-----------GTCTGCA---TGGGTGCGTCTGCAT--G-------- i oryLat2.scaffold3559 C 0 C 0 s gasAcu1.chrXIV 1557482 60 - 15246461 ----------tcccactgca----tgtgtgtgtga----ga---gtgtgttccatctgc-----------gtgtgtg---tgagagtgtgt-CAC--A-------- i gasAcu1.chrXIV C 0 C 0 s danRer11.chr13 376157 52 - 52186027 ----------tgcatgtgca----agaatgtgtgt----gc---aag---------aga-----------gtgtgtg---caagtatatgtgcga--g-------- i danRer11.chr13 C 0 C 0 s petMar3.PIZI01000056v1 1325212 62 - 6220833 ----ACGCAATGCACCAGCT----TACGCACATGC----GGCACATG---------CAC-----------GTGCGTAAGTTGGGTGCACGCGGt------------ i petMar3.PIZI01000056v1 C 0 C 0 e carCri1.KK525596 628 53 - 791 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=513.000000 s galGal6.chrUn_NW_020110134v1 13864 2 + 23766 GG s carCri1.KK525596 681 2 - 791 AG i carCri1.KK525596 I 53 I 67 s hg38.chr9 72961947 2 - 138394717 GG i hg38.chr9 C 0 C 0 s mm10.chr5 20200460 2 - 151834684 GG i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507425 2 - 135134832 TG i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69111015 2 - 120101378 TG i xenLae2.chr8L C 0 C 0 s oryLat2.scaffold3559 6501 2 + 8366 GG i oryLat2.scaffold3559 C 0 C 0 s gasAcu1.chrXIV 1557542 2 - 15246461 AC i gasAcu1.chrXIV C 0 C 0 s danRer11.chr13 376209 2 - 52186027 ag i danRer11.chr13 C 0 C 0 s petMar3.PIZI01000056v1 1325274 2 - 6220833 cg i petMar3.PIZI01000056v1 C 0 C 0 e nanPar1.KN911321v1 3572 0 + 4697 C e bucRhi1.KL531876 8522 4158 + 42612 I a score=-58259.000000 s galGal6.chrUn_NW_020110134v1 13866 67 + 23766 TGGGGCTG--CACACGTGCACAC--------------------GCAGCTAGAT---------GTTTCCAGGATGGTA--TTTGCATGTGA-GTGTGC--------AAAA s hg38.chr9 72961949 49 - 138394717 CAAGTGTG--CACATATGT----------------------------CTGAGT---------GTGAGCAGA--------TGTGCATGTGG-----GC--------AGAT i hg38.chr9 C 0 C 0 s mm10.chr5 20200462 55 - 151834684 C-----TG--CAGGAATGT--AG--------------------GATGCTGTGA---------GTGTACATG--------CGTGCACGAGAAGGATGC--------AGGA i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507427 51 - 135134832 ------TG--TGTGCCTGT--CT--------------------GTCCCTAAAT---------GTGTGTG----------TGTGTGCATGT-GTGTGC--------CTGT i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69111017 61 - 120101378 ------TGAATGCGACTGT--AG--------------------GTGCCAGTAT---------GTGGGTA----------TGTAAGTGTGA-GTGTGCAGGAAAGTTGGT i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3572 49 + 4697 ----------TATAGATGG--AG--------------------GTATACAGAG---------GGGTGTC----------TATAGATGGAG-GTATAC--------AGAG i nanPar1.KN911321v1 C 0 C 0 s oryLat2.scaffold3559 6503 67 + 8366 TGCCTCTG--CATGGGTGC--GT--------------------CTGCATGGGT---------GCGTCTGCGTCTTCATGggtgcgtgtgc-atgtgt--------gcgt i oryLat2.scaffold3559 C 0 C 0 s gasAcu1.chrXIV 1557544 83 - 15246461 TGACACtg--tgtgtgtgt--gtcgc-------------acaactgcatgtgtgatgtgagagtgtgtcccactgcacgtgtgtgtgaga-gtgtgt--------ccca i gasAcu1.chrXIV C 0 C 0 s danRer11.chr13 376211 69 - 52186027 tgtatgtg--cgagaatgt--gt--------------------gtgcaagaga-------gtgtgtgtgcaagtgtgtgtgtgcaagaga-gtgtgc--------aaaa i danRer11.chr13 C 0 C 0 s petMar3.PIZI01000056v1 1325276 78 - 6220833 cgtgtgtg--cacacgtgt--aagGCCAGTGTAATGGTGACACGTGCGTAAGT--------GGGGTGCACAG-------CGTGCGTAATG-TGGTGC--------A--- i petMar3.PIZI01000056v1 C 0 C 0 e carCri1.KK525596 683 67 - 791 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-341.000000 s galGal6.chrUn_NW_020110134v1 13933 1 + 23766 G s carCri1.KK525596 750 1 - 791 G i carCri1.KK525596 I 67 N 0 s hg38.chr9 72961998 1 - 138394717 G i hg38.chr9 C 0 C 0 s mm10.chr5 20200517 1 - 151834684 A i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507478 1 - 135134832 C i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69111078 1 - 120101378 A i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3621 1 + 4697 G i nanPar1.KN911321v1 C 0 C 0 s petMar3.PIZI01000056v1 1325354 1 - 6220833 A i petMar3.PIZI01000056v1 C 0 C 0 e danRer11.chr13 376280 0 - 52186027 C e oryLat2.scaffold3559 6570 0 + 8366 C e gasAcu1.chrXIV 1557627 0 - 15246461 C e bucRhi1.KL531876 8522 4158 + 42612 I a score=-37606.000000 s galGal6.chrUn_NW_020110134v1 13934 16 + 23766 GGT--------------TGCGT---TGCACACG s hg38.chr9 72961999 18 - 138394717 TGCA-------------TGTGTG--TGGGCAGG i hg38.chr9 C 0 C 0 s mm10.chr5 20200518 24 - 151834684 TGTAAGATGC-------TGTGAG--TGTACATG i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507479 26 - 135134832 -----TGTCCCTAAATGTGTGTG--TGTGCATG i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69111079 24 - 120101378 -----GGTGC--AAGTGTGTGGA--TATGTAGA i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3622 26 + 4697 -----GGTGTCTATAGATGGAGG--TATACAGA i nanPar1.KN911321v1 C 0 C 0 s oryLat2.scaffold3559 6570 11 + 8366 ----------------ttgCATGGCTG------ i oryLat2.scaffold3559 C 0 C 0 s gasAcu1.chrXIV 1557627 9 - 15246461 ----------------ctgcacg--tg------ i gasAcu1.chrXIV C 0 C 0 s danRer11.chr13 376280 9 - 52186027 ----------------gtatacg--tg------ i danRer11.chr13 C 0 I 6 s petMar3.PIZI01000056v1 1325355 16 - 6220833 -------CGTTAAGTGGTGCACA---------- i petMar3.PIZI01000056v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-33180.000000 s galGal6.chrUn_NW_020110134v1 13950 28 + 23766 TGTCTGCATT-----TACAT------GTATGTCTGC----AT--A----- s hg38.chr9 72962017 28 - 138394717 TGTGCACATG-----TGCAT------GTATGTGTGG----GC--A----- i hg38.chr9 C 0 C 0 s mm10.chr5 20200542 37 - 151834684 CGTGCACGAGAGGGCTGCAG------GAATGTAAGATGCTGT--G----- i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507505 34 - 135134832 TGTGTGCCTG-----CATGTCCCTAAATGTGTGTGC----CT--G----- i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69111103 28 - 120101378 TCTGTGCCAG-----TCTGT------GGGTATGTAG----GT--G----- i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3648 30 + 4697 GGGGTGTCTA-----TAGAT----GGAGGTATACAG----AG--G----- i nanPar1.KN911321v1 C 0 C 0 s oreNil3.chrLG10 29587389 28 - 32426571 TACCTACTtt-----tactt------gtgtgtgtgc----ga--g----- i oreNil3.chrLG10 N 0 C 0 s oryLat2.scaffold3559 6581 20 + 8366 ------CGTC-----TGCAT------GGGTGTGTCT--------G----- i oryLat2.scaffold3559 C 0 C 0 s gasAcu1.chrXIV 1557636 20 - 15246461 ---------------tgtgt------gagtgtgtcc----cactg----- i gasAcu1.chrXIV C 0 C 0 s danRer11.chr13 376295 24 - 52186027 ----tgtgtg-----caagt------atgtgtgtgc----aa--g----- i danRer11.chr13 I 6 I 8 s petMar3.PIZI01000056v1 1325371 29 - 6220833 ----------CGTCGTAAGT-----GGTGTGCACAC----GT--GCAGTA i petMar3.PIZI01000056v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-201522.000000 s galGal6.chrUn_NW_020110134v1 13978 150 + 23766 ------------------------ATCATG------------GTTAGGAGCATCGGGGTCTTTGCACATGGCTGCATGGTTTTGCATACCTTTGCATGCGTACGGATGG------------TGT--G----TGCACACGGGTGTGCAAGGATGT-GCTTGCAT----------G------TG------TGTGACTGCACAGG----TACGTGTGGGAGTACATCTTTGCAC--- s hg38.chr9 72962045 89 - 138394717 ------------------------GGTGTG------------CACATGTGTATGTGAA-----------GGCAG----------------------------------------------------G----TGTGCACGTGTGTCTGAGTGTAA-GCAGGTGT----------G------CA------TGTGAGTGGGCAGG----TGTGCACG------------TGTAT--- i hg38.chr9 C 0 C 0 s mm10.chr5 20200579 124 - 151834684 ------------------------AGTGTA------------CATGCGTGCACGAGAG-----------GGCTGCAAGAATGTA-------------------AGATGC------------TGTGAG----TGTACATGTGTGCACGAGAGGAATGCAGGAAT----------G------TAAGATGCTGTGAGTGTACATG----TGTGCACGAGAGGGC-----TGCAG--- i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507539 119 - 135134832 ------------------------TCTGTC------------CCTAAATGTATGTGTG--------------TGCCTGTCTGTCCCTAA--------------ATGTG-------------TGT--G----TGTGCATGTGTGTGCCTGCATGT-CCCTAAATGTGTGTGCCTG------CA------TGTCTCTAAATGTG----TGTGTGTG------------TGCAT--- i xenTro9.chr6 C 0 C 0 s xenLae2.chr8L 69111131 110 - 120101378 ------------------------TATGTA------------TCTAGGTAGGTGCCAC--------------TGTGTGGATATGTAGGA--------------AGGTGCC---------ACTCT--G----TAGGTATATATGCAAAGGCCAGC-CCTTGGGT-----TACTTG------GG------TATGTATTAATATG----T-------------------TGC-T--- i xenLae2.chr8L C 0 C 0 s nanPar1.KN911321v1 3678 86 + 4697 ------------------------GGTGTC------------TATAGATGGAGG--------------------------TATACAGAG--------------GGGTGTC-----------TAT--A----GATGGAGGTATACAGAGGGGTGT-CTATAGAT----------G------GA------GGTATACAGAGGGG-------------------------------- i nanPar1.KN911321v1 C 0 C 0 s oreNil3.chrLG10 29587417 104 - 32426571 ------------------------------------------cacgTGAATGCCTACA--------------TGTGCGCGTTCtc------------------gcgtgtc---------tatgt--g----agtgctcgtgagtgactgtgtgt-gcatacCT----------G-ATATATG------CATGCACGTGAGTG----AGT----A------------TGCAT--- i oreNil3.chrLG10 C 0 C 0 s oryLat2.scaffold3559 6601 101 + 8366 ------------------------------------------CATGGGTGCGTCTGCA--------------TGGCTGCGTTTGCATGG--------------GTGCGTC---------TGCAT--G----GCTGCGTTTGCATGGGTGCGTCT-GCATGGGT----------G------TG------TCTGCA--TGGGTG----CGT----T------------TGCAT--- i oryLat2.scaffold3559 C 0 C 0 s gasAcu1.chrXIV 1557656 115 - 15246461 ------------------------------------------cacgtgtgtgtgagag--------------tgtgtcccactgcatgt--------------gtgtgag---------agtgt--gtcccactgcacgtgtttgtgtgtgtgt-gtCT-CCT----------A-TTGCACG------TGTGTGTGAGAGTG----TGTCCCAC------------TGCAC--- i gasAcu1.chrXIV C 0 C 0 s angJap1.KI316854 12996 131 + 43521 ------------------------agcacaggtaGGTGCAGACAGGTGAGCGCAGGTG--------------TGCAGGGATTTGAATAGCCCT----------GTGTAAC---------AGCAC--A----GGTAAGTGCAGACAGGTGAGAGC-GCAGGTGT----------G------CA------GGG--ATTTGAATAGCCCTGTGTAAC------------AGCAC--- i angJap1.KI316854 N 0 C 0 s danRer11.chr13 376327 121 - 52186027 ------------------------tgcgagagtatgtgcaagtatgtgtgtgtgagag--------------tgtgtg----tgcaaaa--------------gtgtatg---------tgcaa--g----agtgtgtgcaatagagtgtgtgc-aaaagtgt----------g------tg------tgtgcattagagtg----tgtgcaat------------agtac--- i danRer11.chr13 I 8 I 22 s petMar3.PIZI01000056v1 1325400 158 - 6220833 GTGTTGCACACGTGCGTTAAGCTGGGTGCA------------CACGTGTCGGTAAGTG--------------GGTGCACACGTGCGTAAGTT-----------GGGTGCACAGGTGCGTAATGT--G----GGTGCACACGTGCGTAAGTGGGT-GCACACGT----------GGCTAAGGG------GGTGCACACGTGCG----TAAGTGGG------------TGCACCAC i petMar3.PIZI01000056v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-2102.000000 s galGal6.chrUn_NW_020110134v1 14128 15 + 23766 TTGTGTgtatggttc s hg38.chr9 72962134 15 - 138394717 GTATGTGTGGGCAGG i hg38.chr9 C 0 C 0 s mm10.chr5 20200703 10 - 151834684 GAATGTA-----AGA i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507658 15 - 135134832 GTGTGTGCCTGCATG i xenTro9.chr6 C 0 I 4 s xenLae2.chr8L 69111241 15 - 120101378 GCACTTGGCTACATG i xenLae2.chr8L C 0 N 0 s oreNil3.chrLG10 29587521 15 - 32426571 ATAGGTGTGGGAGTA i oreNil3.chrLG10 C 0 N 0 s oryLat2.scaffold3559 6702 15 + 8366 GGCTGCGTCTGCATG i oryLat2.scaffold3559 C 0 I 29 s gasAcu1.chrXIV 1557771 15 - 15246461 GTGTGTGTGAGAGAG i gasAcu1.chrXIV C 0 I 43 s angJap1.KI316854 13127 15 + 43521 AGGTAAGTGCAGACA i angJap1.KI316854 C 0 I 33 s petMar3.PIZI01000056v1 1325558 15 - 6220833 GTGCGTAAGTGGGTA i petMar3.PIZI01000056v1 C 0 C 0 s letCam1.KE994057 31785 15 - 463839 ttgtgtgcgtgaatA i letCam1.KE994057 N 0 C 0 e danRer11.chr13 376448 22 - 52186027 I e nanPar1.KN911321v1 3764 0 + 4697 C e bucRhi1.KL531876 8522 4158 + 42612 I a score=-2698.000000 s galGal6.chrUn_NW_020110134v1 14143 3 + 23766 --tgc------- s hg38.chr9 72962149 3 - 138394717 --TGT------- i hg38.chr9 C 0 C 0 s mm10.chr5 20200713 3 - 151834684 --TGC------- i mm10.chr5 C 0 C 0 s petMar3.PIZI01000056v1 1325573 12 - 6220833 CACGTGGGTGGC i petMar3.PIZI01000056v1 C 0 C 0 s letCam1.KE994057 31800 12 - 463839 TACGCGTAAAGT i letCam1.KE994057 C 0 C 0 e angJap1.KI316854 13142 33 + 43521 I e danRer11.chr13 376448 22 - 52186027 I e oryLat2.scaffold3559 6717 29 + 8366 I e gasAcu1.chrXIV 1557786 43 - 15246461 I e nanPar1.KN911321v1 3764 0 + 4697 C e xenTro9.chr6 125507673 4 - 135134832 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-136072.000000 s galGal6.chrUn_NW_020110134v1 14146 91 + 23766 acacatGCGC----ATTCATATGCG-------------------TGTGCAAGGCTGTGCT----TG--CA----CGTCTGCATGC----------A---AATGGAGGCATG--------CAAGGTGCTGTTTGC----------GAGTGAGCGTG s hg38.chr9 72962152 96 - 138394717 ACACATGAGT----ATATATGTGTG---GGCAGGTGTGCACATGTGTA------TGTGAA----GG--CA----GGTGTGCACGT----------G-----TGTCTGAGTG--------TGAGCAGTTGTGA-------------TGTGTGTGGG i hg38.chr9 C 0 C 0 s mm10.chr5 20200716 112 - 151834684 ---TGTGAGT----GTACATGCGTGCACGAGAGGGCTGCAGGAATGTAAGATGCTGTGAG----TGTACA----TGTGTGCACGA----------GAGGAATGCAGGAATG--------TAAGATGCTGTGAGT----------GTACATGCGTG i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507677 98 - 135134832 ---TAAATGT----GTGTGTGTGTG---CATGTGTGTGCCTGCATGTC------TCTAAA----TG--TG----TGTGTGCATGT----------G---TGTGCCTGCATG--------TCCCTAAATGTGTGT----------GCCTGTCTGTC i xenTro9.chr6 I 4 C 0 s nanPar1.KN911321v1 3764 33 + 4697 --------------------------------------------TGTC------TATAGA----TG--GA----GGTATACAGAG----------G---GGTGTCT------------------------------------------------- i nanPar1.KN911321v1 C 0 C 0 s oryLat2.scaffold3559 6746 87 + 8366 ----CTGCGT----CTGCATGACTG-------------------CGTC------TTCA------TG--GG----TGTGTCTGCATGGCTGCGTCTT---CATGGGTGCGTT--------TGCATGGCTGCGTCT----------GCATGGGTG-- i oryLat2.scaffold3559 I 29 N 0 s gasAcu1.chrXIV 1557829 89 - 15246461 ----GTGTGT----GAGAGTGTCCC-------------------CCAC------CGCACGACATTG--AG----TGAGTCTGTCT---CACATCCG---GGTGTGCGTGTC--------CCCACAGC-Atgtgt----------gtgtgagtg-- i gasAcu1.chrXIV I 43 I 11 s angJap1.KI316854 13175 89 + 43521 ----CAGTGTAACAGTGCAGGTA-----------------------AG------TGCAGA----CA--GG----TGAGAGCGCAG----------G---TGTGCAGGGATT--------TGAACAGCCCTGTGTAACAGCACAGGTATAGGTG-- i angJap1.KI316854 I 33 C 0 s danRer11.chr13 376470 79 - 52186027 ----gagtgt----gtgcaagtatg-------------------tgtg------tgcgag----aa--AG----TGTGTGTGCAA----------G---AGTGTGTG------------TGCACGATTGTGTGCAATA------GTGTGTGTG-- i danRer11.chr13 I 22 C 0 s petMar3.PIZI01000056v1 1325585 65 - 6220833 ----------------ACACGTGCG-------------------TTGT------GGTGCA----CA--CG-------GCGTAAGT----------G---GGTGCACACGTG---------GCGTAAGTGGGTGC----------ACACGTG---- i petMar3.PIZI01000056v1 C 0 C 0 s letCam1.KE994057 31812 81 - 463839 ----------------GCGCGTATG-------------------CATC------CGTGCG----TG--CGAGGATGTGTGTACGC----------G---TATGTATACATATAAACGTATGTATAattgtgtac----------gagtgtg---- i letCam1.KE994057 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-30483.000000 s galGal6.chrUn_NW_020110134v1 14237 34 + 23766 CAAA-----GGTGGCCCATGTGG------GTGTGTGTT------CATATGT s hg38.chr9 72962248 23 - 138394717 CA------------GGTATTGAC------ATGTG----------TCTGAGT i hg38.chr9 C 0 C 0 s mm10.chr5 20200828 34 - 151834684 CACG-----AGAGGGCTACAGGA------ATGTAAGAT------GCTGTGA i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507775 29 - 135134832 CCTA----------AATGTGTGT------GTGTGTGCA------TGTGTGT i xenTro9.chr6 C 0 C 0 s nanPar1.KN911321v1 3797 24 + 4697 ---------------ATAGATGG------AGGTATACA------GAGGGGT i nanPar1.KN911321v1 C 0 C 0 s gasAcu1.chrXIV 1557929 29 - 15246461 ----------------caagaga------gtgtgtgtgtctcactgcatgt i gasAcu1.chrXIV I 11 C 0 s angJap1.KI316854 13264 39 + 43521 CAAACAGATGAGAGCGCAGGTGA------GCAGGGGTT------CGCGCGT i angJap1.KI316854 C 0 N 0 s danRer11.chr13 376549 33 - 52186027 CAAA------AGTGTGCGCGCGA------GAGTGTGTG------TGCACGA i danRer11.chr13 C 0 I 2 s petMar3.PIZI01000056v1 1325650 25 - 6220833 --------------CGTAAGTGG------gtaagtgta------cacgtgt i petMar3.PIZI01000056v1 C 0 C 0 s letCam1.KE994057 31893 31 - 463839 --------------tatgAATGATTGCCTGTTTTtgta------cgagtgt i letCam1.KE994057 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-142701.000000 s galGal6.chrUn_NW_020110134v1 14271 198 + 23766 ---------------GTGTG--------CAAATATGGGC-----TTGCACAGCTATGTGCAGAGGG--------------ATGCGGTTGCAATGTCTGCAC---------------------------A--------TGGGTTTGTGCAAGGGCAGGGTCGCACAGCTTGACCAC-AA------ATACGCCATAGGGTTGAACCGCACGTGTTCATGCA------------CGCATGTGGCTGTTTGCACACAG----------------GAGTGCAAaggatgtgc---a------tgtgtgtgcaaagGTAGGCTTG---------- s hg38.chr9 72962271 155 - 138394717 ---------------GTGAG--------CAGGTGTGCAT-----GTCTGTGTGCATGTGAGTAGGT--------------GTGCACGTTT-AGGTGTGCAC---------------------------A--------TGTGTATGTGTGTTAGCAGGTG-----TGCATGTCTGT-GA------GC--------------AGGTGTGCATGTGTGTGGG------------C--------------------AG----------------GTGTGCA---CATGTGT---A------TGTGTGTGGGCAGGTGTGCACA---------- i hg38.chr9 C 0 C 0 s mm10.chr5 20200862 205 - 151834684 ---------------GTGTA--------CATGTGTGCACGAGAGGGCTGCAGGAATGTAAGATGCT--------------GTGAGTGTAC-ATGCGTGCACGAGAGGGCTGCAGGAATGTAAGATGCTG--------TGAGTGTACATGCGTGCAGGAGAAGGCTGCAGGATTGT-AA------GA--------------TGCTGTGAGTGTACATGAG------------TGCATGAG-------------AG----------------GGCTGCA---GGAATGT---AAGATGCTGTGAGTGTACATGTGTGCACG---------- i mm10.chr5 C 0 C 0 s xenTro9.chr6 125507804 175 - 135134832 ---------------GCCTGCATGTCCCTAAATGTGTGT-----GCCCATC----TGTCCCTAAAT--------------GTGTGTGTGC-ATGTGTGTGC-------------------------CTGTCTGTCCCTAAATGTGTGTGTGTGCCTGCG---------TGTCCCT-AA------AT------------------------GTGTGTGCT------------TGCATGTG-------------AGCAGTACCCTGTACACAGTACACT---AAAGAATCCAT------TTTAAAGGTAAATTTG---------------- i xenTro9.chr6 C 0 I 1394 s nanPar1.KN911321v1 3821 126 + 4697 ---------------GTCTA--------TAGATGGAGGT-----ATACAGAGGGGTGTCTATAGAT--------------GGAGGTATAC-AGAGGGGTGT-------------------------CTA--------TAGATGGAGGTATACAGAGGGG---------TGTCTAT-AG------AT------------------------G---------------------------G-------------AG----------------GTATACA---GAGGGGT---G------TCTATAGATGGAG------------------- i nanPar1.KN911321v1 C 0 C 0 s gasAcu1.chrXIV 1557958 203 - 15246461 ---------------gtgtg--------agagtgtgtcc-----cactgcatgtgtgtgtgagagtatgtccccctgggcgtgtgtgtga-gagtgtgtcc-------------------------cac--------tgcgtgtgtgtgtgtgtcccac---------tgcatgt-gtgtgagagt----------gtcccactgcatgtgtgtgtgagagtgtgtccccctgcacgtgtgtgtcccactgcat----------------gtgtgtg---tgagtgt---g------tcccactacatgtgtg---------------- i gasAcu1.chrXIV C 0 C 0 s danRer11.chr13 376584 148 - 52186027 ---------------------------------CTGCCC-----GATAG--TGTGTGTGCAAAAGT--------------GTGTGTGGAA-GAGTGTGTGG-------------------------CGA--------AGAGTGTGTGCGTCTGTCtgtc---------tgtctgt-gt------at----------gtctc--------tgtgtgtg--------------cacacgtgtctgtctgtctgcat----------------gtttgtg---tatgcgt---g------tttgagtgcatgtgt----------------- i danRer11.chr13 I 2 C 0 s petMar3.PIZI01000056v1 1325675 171 - 6220833 gta-------agtgggtgca--------cacgtgtgt-a-----gtgGGT-CAAACGTGCTGTAAA--------------GTGGGTGCAC-ACGTGT------------------------------TG--------TAAGTGGGTGCACGTGTGTAAG---------TGGGTGCAAC------GT------------------GCGTAAGTGGGTGCAACAGTGT-----CGTAAGTG-------------GT----------------GCAC-CG---T-CGTGT---A------AGTGGGTGCACACGTGGCGTAGTG--TGGTGC i petMar3.PIZI01000056v1 C 0 C 0 s letCam1.KE994057 31924 166 - 463839 gtatgtatatattgcgtgta--------cgaatgtgtga-----gtgtgtatgaatg------aat--------------gtgcgtgtat-tggtattggt-------------------------atg--------tacgggtgtgtatgtgtgtgtg---------tgtgtac-gc------ac------------------gcgtgtgtgtgtgta----------------------------------c----------------gcacgcg---tgtgtgt---a------tgtgtgtgtgcgcgtgtcacggTACCTGCTTC i letCam1.KE994057 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-24898.000000 s galGal6.chrUn_NW_020110134v1 14469 17 + 23766 AAA----TGTGTGC--GTACAGA-- s hg38.chr9 72962426 14 - 138394717 TG-----TGTATGT--ATGT--G-- i hg38.chr9 C 0 C 0 s mm10.chr5 20201067 21 - 151834684 AGAGGGCTGCAGGA--ATGTAGG-- i mm10.chr5 C 0 C 0 s xenTro9.chr6 125509373 13 - 135134832 --------AAATGT--GTGTGCA-- i xenTro9.chr6 I 1394 C 0 s nanPar1.KN911321v1 3947 7 + 4697 ----------------GTATACA-- i nanPar1.KN911321v1 C 0 C 0 s gasAcu1.chrXIV 1558161 14 - 15246461 -------tgtgaga--gtgtgtc-- i gasAcu1.chrXIV C 0 C 0 s danRer11.chr13 376732 7 - 52186027 ----------------gcgtttc-- i danRer11.chr13 C 0 C 0 s petMar3.PIZI01000056v1 1325846 19 - 6220833 ------ACACGTGCGTAagtggggc i petMar3.PIZI01000056v1 C 0 I 32 s letCam1.KE994057 32090 17 - 463839 ------TCGCGTGC--ACGTGGAGA i letCam1.KE994057 C 0 N 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-89569.000000 s galGal6.chrUn_NW_020110134v1 14486 125 + 23766 TCGCTGTGCTTGAACATG--GATGTGT----------------------CATT--TTGCACACGTGTGTACA------TGCATGT--AGAT----GTATG------TGTGCTCATGGA--TGTCAGCAAAGgtgttcttgcaca--------tgtgt------------gcacgtgt--------------------ttgcctgtggg----tgt s hg38.chr9 72962440 131 - 138394717 AAGGCAGGTGTGCACATG--TGTGAGC----------------------AGGT--GTGCACATGTGTATGTA------TGCATGT--GGGC----AGGTG------TGCACATGTTTG--TGTGGGCAGGGGTGCACATGTGTA------TGTGTGT------------AAACAGGT--------------------GTGCACATGTGTCTGTGT i hg38.chr9 C 0 C 0 s mm10.chr5 20201088 126 - 151834684 ATGCTGTGAGTGTACATG--CGTGCAC----------------------GAGA--GGGC-----TGCAGGAA------TATAAGA--TGCT----GTGAG------TGTACATGCGTG--CAGGAG-AAGGCTGCAGGAATGTAAGATGCTGTGAGT------------GTACATGC--------------------GTGCACGAGAG-----GG i mm10.chr5 C 0 C 0 s xenTro9.chr6 125509386 136 - 135134832 TTTGTGTTGCTAAATGTG--TGTGCTTGCA------TGTCCCTAAC---GTGT--GTGCATTTGTGTAACTA------CATGTGT--GTGC----TTGCA------TGTCCCTA-ATG--TGTGTGCATTTGTGTTGCTACATG------TGTGTGC------------CTGCATG----------------------TCCCTAATGT-----GT i xenTro9.chr6 C 0 C 0 s nanPar1.KN911321v1 3954 147 + 4697 GAGGGGTGTCTATAGATG--GAGGTATACAGAGGGGTGTCTATAGATGGAGGT--ATACAGAGGGGTGTCTA------TAGATGG--AGGT----ATACAGAGGGGTGTCTATAGATGGAGGTATACAGAGGGGTGTCTATAGA------TGGAGGT------------ATACA-----------------------------gaggg-----gt i nanPar1.KN911321v1 C 0 C 0 s gasAcu1.chrXIV 1558175 137 - 15246461 ctactgcatacgtgtgtg--tgtgtgt----------------------ccta--ctgcatgtgtgtgtgtgTCCCACTGCATGT--GTGTGAGAGTGTG------TCCCACTGCATG--TGTGTG--AGAGTGTCCCACTGCA------TGTGTGTGAGAGTGTCCCACTGCAtgt--------------------gt--------------gt i gasAcu1.chrXIV C 0 C 0 s danRer11.chr13 376739 116 - 52186027 tctctgcatatgtgtgtgtatgtatat----------------------ctgt--ctgcatgtgtctgtata------tgaatat--atat----gtatg------tctgtctgcatg--tgtgtg--tgtgtgt-gtacagta------taGCTGT------------CTGCAtgt--------------------gt--------------gt i danRer11.chr13 C 0 C 0 s petMar3.PIZI01000056v1 1325897 98 - 6220833 tgtgtagtggtgtgcaca--cgtgtgt----------------------aagtgggtgcacacgtgcgtaag------tg-------gtgc----acacg------taTGCGTA---G--TGGGTG--------------CACA------CGTGCGTAAGTG-------GGGCACGT-------------------------------------- i petMar3.PIZI01000056v1 I 32 C 0 s letCam1.KE995463 4270 127 + 39816 TGTCTGCATCTGTACATA--GATGTGT----------------------GAGT--ATGCATTTGTGTTTGGA------TTTATTTGCACGT----ATATG------TTTGCGTGCCTG--TGGGTA--------------TGCATTTTTTCTTGCAT------------GTGCATTTCTAAATATTCCTGTCGTTAT------------------ i letCam1.KE995463 N 0 N 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-10876.000000 s galGal6.chrUn_NW_020110134v1 14611 15 + 23766 gtgcaggt-gtgt-----g-ga s hg38.chr9 72962571 13 - 138394717 GAGCAGGT-ATGC-----A--- i hg38.chr9 C 0 C 0 s mm10.chr5 20201214 16 - 151834684 CTGCAGGA-ATGT-----AAGA i mm10.chr5 C 0 C 0 s xenTro9.chr6 125509522 15 - 135134832 GTGCATTT-GTGT-----TAC- i xenTro9.chr6 C 0 C 0 s nanPar1.KN911321v1 4101 15 + 4697 gtatatag-atgg-----agg- i nanPar1.KN911321v1 C 0 C 0 s gasAcu1.chrXIV 1558312 17 - 15246461 gtgagagt-gtgtcccac---- i gasAcu1.chrXIV C 0 C 0 s danRer11.chr13 376855 12 - 52186027 gtgtgtgt-gtgt--------- i danRer11.chr13 C 0 C 0 s petMar3.PIZI01000056v1 1325995 14 - 6220833 GCGTAagtggtgc-----a--- i petMar3.PIZI01000056v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=1179.000000 s galGal6.chrUn_NW_020110134v1 14626 1 + 23766 t s allSin1.KE695952 1801309 1 + 3971137 t i allSin1.KE695952 N 0 N 0 s mm10.chr5 20201230 1 - 151834684 T i mm10.chr5 C 0 C 0 s xenTro9.chr6 125509537 1 - 135134832 T i xenTro9.chr6 C 0 C 0 s nanPar1.KN911321v1 4116 1 + 4697 t i nanPar1.KN911321v1 C 0 C 0 s gasAcu1.chrXIV 1558329 1 - 15246461 t i gasAcu1.chrXIV C 0 C 0 s petMar3.PIZI01000056v1 1326009 1 - 6220833 c i petMar3.PIZI01000056v1 C 0 C 0 e danRer11.chr13 376867 0 - 52186027 C e hg38.chr9 72962584 0 - 138394717 C e bucRhi1.KL531876 8522 4158 + 42612 I a score=5059.000000 s galGal6.chrUn_NW_020110134v1 14627 17 + 23766 acacgtgtgtgtgcacg s hg38.chr9 72962584 14 - 138394717 ---CGTGTGTGGGCAGG i hg38.chr9 C 0 C 0 s mm10.chr5 20201231 16 - 151834684 GC-TGTGAGTGTACATG i mm10.chr5 C 0 C 0 s xenTro9.chr6 125509538 15 - 135134832 --AAATGTGTGTGCCTG i xenTro9.chr6 C 0 C 0 s nanPar1.KN911321v1 4117 12 + 4697 --atataggagga---g i nanPar1.KN911321v1 C 0 C 0 s gasAcu1.chrXIV 1558330 17 - 15246461 acatgtgtgtgtgagag i gasAcu1.chrXIV C 0 C 0 s danRer11.chr13 376867 15 - 52186027 --gtgtgtgtgtgtgtg i danRer11.chr13 C 0 N 0 s petMar3.PIZI01000056v1 1326010 17 - 6220833 acgtgtgtaagtgggtg i petMar3.PIZI01000056v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-38299.000000 s galGal6.chrUn_NW_020110134v1 14644 61 + 23766 t-------acaggg-tgtgtgcat--gtcag--tgcttgctttttcaCA-CGCGTGTGCGTG-------CACAGGggtgca-------------------------- s hg38.chr9 72962598 61 - 138394717 TGTGCAC-Atgtgtctgtgtgtgtgggtcag-gtgt----------gca-tatgtgtctgtg-------tgcatgtgtgtg-------------------------- i hg38.chr9 C 0 I 7 s mm10.chr5 20201247 53 - 151834684 TGTGCACGAGAGGGCTGCAAGAAT--GTAAG-ATGC------------------TGTGAGTG-------TACATGTGTGCA-------------------------- i mm10.chr5 C 0 N 0 s xenTro9.chr6 125509553 66 - 135134832 CATGTCC-CTAACG-TGTGTGCAT--TTGTG-TTGC---------TACA-TGTGTGTGCCTGCATGTCCCTAACGTGTGTG-------------------------- i xenTro9.chr6 C 0 I 2 s nanPar1.KN911321v1 4129 40 + 4697 gaggagc-atacag-tgag---------gag-gagg---------tata--------------------cagaggggtgta-------------------------- i nanPar1.KN911321v1 C 0 N 0 s gasAcu1.chrXIV 1558347 62 - 15246461 tgtgtcccattgcg-tgtgtgtgt--gagagtgtgt---------cccactgcgtgtgtgtg-------tgagagtgtgtc-------------------------- i gasAcu1.chrXIV C 0 C 0 s petMar3.PIZI01000056v1 1326027 54 - 6220833 ---------------------------------------------caca-cgtgcgcacgag-------GAAATGCTCGCGCACAGCGGGAAGTCGTGGTCGGCGAA i petMar3.PIZI01000056v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-1689.000000 s galGal6.chrUn_NW_020110134v1 14705 3 + 23766 cca- s hg38.chr9 72962666 2 - 138394717 -CA- i hg38.chr9 I 7 C 0 s xenTro9.chr6 125509621 3 - 135134832 TTT- i xenTro9.chr6 I 2 C 0 s gasAcu1.chrXIV 1558409 3 - 15246461 cca- i gasAcu1.chrXIV C 0 N 0 s petMar3.PIZI01000056v1 1326081 3 - 6220833 -CGT i petMar3.PIZI01000056v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-344.000000 s galGal6.chrUn_NW_020110134v1 14708 11 + 23766 gcactgcccca- s hg38.chr9 72962668 11 - 138394717 TTGCTCTCCCA- i hg38.chr9 C 0 C 0 s xenTro9.chr6 125509624 11 - 135134832 GTGTTGCTACA- i xenTro9.chr6 C 0 N 0 s petMar3.PIZI01000056v1 1326084 11 - 6220833 -TCACGCCCCAG i petMar3.PIZI01000056v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=516.000000 s galGal6.chrUn_NW_020110134v1 14719 21 + 23766 gaaGAGTTTTCTGGGGGAGGC s hg38.chr9 72962679 21 - 138394717 GATACAGTGTTAGTGGGAGTC i hg38.chr9 C 0 I 1171 s petMar3.PIZI01000056v1 1326095 21 - 6220833 AAAGCAGATTTTGAGCAAGTT i petMar3.PIZI01000056v1 C 0 C 0 e bucRhi1.KL531876 8522 4158 + 42612 I a score=-459.000000 s galGal6.chrUn_NW_020110134v1 14740 39 + 23766 AGAACTCACACGAgactgctggagagcacaggg--------cggg---aa s petMar3.PIZI01000056v1 1326116 37 - 6220833 -------------GAGTGTGGCGGTGCACGgggaacctagcctggcacaa i petMar3.PIZI01000056v1 C 0 C 0 e hg38.chr9 72962700 1171 - 138394717 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=-1063.000000 s galGal6.chrUn_NW_020110134v1 14779 2 + 23766 --gt s apaVit1.JMFV01077927 2476 2 + 4385 --tt i apaVit1.JMFV01077927 N 0 N 0 s petMar3.PIZI01000056v1 1326153 2 - 6220833 ga-- i petMar3.PIZI01000056v1 C 0 C 0 e hg38.chr9 72962700 1171 - 138394717 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=160.000000 s galGal6.chrUn_NW_020110134v1 14781 3 + 23766 aca s petMar3.PIZI01000056v1 1326155 3 - 6220833 gca i petMar3.PIZI01000056v1 C 0 C 0 e hg38.chr9 72962700 1171 - 138394717 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=300.000000 s galGal6.chrUn_NW_020110134v1 14784 1 + 23766 g s allMis1.AKHW01035847 2044 1 + 2739 G i allMis1.AKHW01035847 N 0 N 0 s petMar3.PIZI01000056v1 1326158 1 - 6220833 g i petMar3.PIZI01000056v1 C 0 C 0 e hg38.chr9 72962700 1171 - 138394717 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=489.000000 s galGal6.chrUn_NW_020110134v1 14785 66 + 23766 ctctgcagca--------ctgcgcgctgcacagcagc-ctgcaggacggcacGGAGCACCGC-TGCGTCGGGGTGT s petMar3.PIZI01000056v1 1326159 76 - 6220833 ctcagcagtggcgtgtgtgtgtgtgtcgcgcagaagctctccggggttgtgtgaaggtacgtgtacgtgtgtgtgt i petMar3.PIZI01000056v1 C 0 N 0 e hg38.chr9 72962700 1171 - 138394717 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 14851 21 + 23766 TGGGACGGggatgaggcactg e hg38.chr9 72962700 1171 - 138394717 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=1195.000000 s galGal6.chrUn_NW_020110134v1 14872 62 + 23766 cacagaacacaCGCTCACACACACAGTCGGCCAAAGCGAGCGtttaagcactgcagtgcaca s allMis1.JH732814 349750 52 + 512361 CACAGAAC---CACACATGCACACAGTCACACA-------CCCTGACTCACAACTGTGCACA i allMis1.JH732814 N 0 N 0 e hg38.chr9 72962700 1171 - 138394717 I e bucRhi1.KL531876 8522 4158 + 42612 I a score=200.000000 s galGal6.chrUn_NW_020110134v1 14934 2 + 23766 gc s bucRhi1.KL531876 12680 2 + 42612 GC i bucRhi1.KL531876 I 4158 C 0 e hg38.chr9 72962700 1171 - 138394717 I a score=-1826.000000 s galGal6.chrUn_NW_020110134v1 14936 42 + 23766 tacCGATCCGCCAAGAGGTCCCAAAAGG--accatcagccagca s bucRhi1.KL531876 12682 32 + 42612 TAGCGATT------GATGTCCGAAA------TCCGCAGCTTCCC i bucRhi1.KL531876 C 0 C 0 s allMis1.JH733614 593900 44 + 1203201 CACCCGACAGACCAGACGTGCGAGGACGCCGCCTGCCCCTTCTC i allMis1.JH733614 N 0 C 0 e hg38.chr9 72962700 1171 - 138394717 I a score=-15192.000000 s galGal6.chrUn_NW_020110134v1 14978 164 + 23766 cagctcggATTGGCTGTAAGGGGAGGGACTGGTTGGC-TCAGGGCCTTGC------------------------------GGGCATCCCCATGGAGGCAGC-----GGTGTCCTCTGCCTG------AGTtacctcaccctgctgc-----------cctcctgacA-TGTCTGTATGCCCTGAGCCGGA----TCACGCACTCTACGCGTG-----------------GCCAGCGCGT s bucRhi1.KL531876 12714 176 + 42612 CAGCATGGgttgttttagaggtgaggcGTCAGTAGTTACCAGACCCTTGC------------------------------GGGCGTCCCCACGGAGGCAAC-----ATGGTCCTTGTCATGCCGTGCAGCTACCttgtctctgtgc-----------ccaaacgGCACTACCTTTATAGCTGAGGTTGAAGCCGCCCCTCATGTAACATATG-----------------GCCAGTACGT i bucRhi1.KL531876 C 0 N 0 s allMis1.JH733614 593944 152 + 1203201 GCGCGCCGTGACGCTGCGCCGGGAGCTGNAGCTGTGCGCCGAGGTCTTTG------------------------------GGGTGCCCCC----GGCCCGC-----GTGGGCCCGGCCGTG----------GCCTTCACCAACGCC-----------TGCTACGGCGCCGCCCGC---CCCCGCGCCG-------CCCGCATCCTCTTCATC-----------------AATGGTAGGG i allMis1.JH733614 C 0 I 1 s hg38.chrX 153501451 225 + 156040895 caagtcaggctgagtgacttgggagaaa----------tcagagcctctctctcggccttagcttttgtgtccataaaatggggatactcatcaggccagctccaggggatCCTATCCTTCCCCCCAGGCTCCCCTGGCTCCCTCTGACTTCATGGGCCCCTTGCTGCCTCCTGTGGGCTCAGACACGGA----GCCTGCCCCTTCCTCGGGAGAGGTCTCAGTTTTGTGCCAGTTCTT i hg38.chrX n 1171 C 0 a score=-1288.000000 s galGal6.chrUn_NW_020110134v1 15142 36 + 23766 ----GAATGCACAGTGCAGCGCAgggggggCAGCCAATCC s allMis1.JH733614 594097 36 + 1203201 ----GGGTCCCCAGTGCCTCCCAGTCTGCCCAGTCCAGCC i allMis1.JH733614 I 1 I 36 s hg38.chrX 153501676 36 + 156040895 TGAGGGGAAATGAGGGATGTGCCGGGAAGCCTGCCC---- i hg38.chrX C 0 C 0 a score=382.000000 s galGal6.chrUn_NW_020110134v1 15178 30 + 23766 ACAGCTCGTTGCTGGTGCCTCCTCACTGTT s hg38.chrX 153501712 30 + 156040895 GGCCCCCGCCCCTCCAGCCTGCCCACTGCT i hg38.chrX C 0 n 0 e allMis1.JH733614 594133 36 + 1203201 I a score=216.000000 s galGal6.chrUn_NW_020110134v1 15208 13 + 23766 ACCAAAACACAGC s hg38.chr11 133524689 13 - 135086622 ACCCAGGCAGGCC i hg38.chr11 n 0 C 0 e allMis1.JH733614 594133 36 + 1203201 I a score=-629.000000 s galGal6.chrUn_NW_020110134v1 15221 6 + 23766 -AGCGGC s allMis1.JH733614 594169 6 + 1203201 -ATCGAC i allMis1.JH733614 I 36 I 8583 s hg38.chr11 133524702 6 - 135086622 CACGGG- i hg38.chr11 C 0 C 0 a score=-1934.000000 s galGal6.chrUn_NW_020110134v1 15227 153 + 23766 CCCGTTGCCGAG--TTCCTTCATCACTGCAGTGTGATT--TCTGTGCACTGTACGGTTTGTTCTGC-------------------------ATCTTTCGATAGTTGCAG----------TTTCAGTCCGGTTACTGCATATC------TGCAGCCGTGCTCGTGACACCgaagttcagttcagtt-------cagttcaggcAGT s hg38.chr11 133524708 202 - 135086622 CTCTGCCCTCAGGCTCCCTCCCACCCTGTGGTGGGCACAGCCCCTGCTCTG---GGCTGGCTCTGCGAAGAACCAGGGAGAGTGGGAAAGAATATATTGGGGGGGGCAGGGGTGCTGCCCCTCACCCAGGAGAAGGGATGTTCCAGGATCCCGCGGCACAGGCAACACAGCTCCTTGGTCCATTTGCAGGGACAGTAGAGGCCGG i hg38.chr11 C 0 C 0 e allMis1.JH733614 594175 8583 + 1203201 I a score=174.000000 s galGal6.chrUn_NW_020110134v1 15380 3 + 23766 AGG s strCam1.KL206632 1110586 3 + 1250962 AAG i strCam1.KL206632 N 0 I 13 s hg38.chr11 133524910 3 - 135086622 AAT i hg38.chr11 C 0 C 0 e allMis1.JH733614 594175 8583 + 1203201 I a score=-465.000000 s galGal6.chrUn_NW_020110134v1 15383 13 + 23766 TTGGAAGGTTCCC s hg38.chr11 133524913 13 - 135086622 GTGAGGACCAAGC i hg38.chr11 C 0 C 0 e strCam1.KL206632 1110589 13 + 1250962 I e allMis1.JH733614 594175 8583 + 1203201 I a score=-128.000000 s galGal6.chrUn_NW_020110134v1 15396 1 + 23766 C s strCam1.KL206632 1110602 1 + 1250962 A i strCam1.KL206632 I 13 I 20 s hg38.chr11 133524926 1 - 135086622 C i hg38.chr11 C 0 C 0 e allMis1.JH733614 594175 8583 + 1203201 I a score=4.000000 s galGal6.chrUn_NW_020110134v1 15397 10 + 23766 TCGGGCAGTC s hg38.chr11 133524927 10 - 135086622 TCTGTCCTCC i hg38.chr11 C 0 n 0 e strCam1.KL206632 1110603 20 + 1250962 I e allMis1.JH733614 594175 8583 + 1203201 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 15407 3 + 23766 GCA e strCam1.KL206632 1110603 20 + 1250962 I e allMis1.JH733614 594175 8583 + 1203201 I e hg38.chr11 133524937 0 - 135086622 n a score=168.000000 s galGal6.chrUn_NW_020110134v1 15410 4 + 23766 CAGT s strCam1.KL206632 1110623 4 + 1250962 CTGT i strCam1.KL206632 I 20 I 19 e allMis1.JH733614 594175 8583 + 1203201 I e hg38.chr11 133524937 0 - 135086622 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 15414 19 + 23766 CCGTACACAGCCGCTCAAA e strCam1.KL206632 1110627 19 + 1250962 I e allMis1.JH733614 594175 8583 + 1203201 I e hg38.chr11 133524937 0 - 135086622 I a score=-31.000000 s galGal6.chrUn_NW_020110134v1 15433 1 + 23766 C s strCam1.KL206632 1110646 1 + 1250962 T i strCam1.KL206632 I 19 I 36 e allMis1.JH733614 594175 8583 + 1203201 I e hg38.chr11 133524937 0 - 135086622 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 15434 23 + 23766 CAGGAGAACAGCATCAGCTCGTT e strCam1.KL206632 1110647 36 + 1250962 I e allMis1.JH733614 594175 8583 + 1203201 I e hg38.chr11 133524937 0 - 135086622 I a score=-31.000000 s galGal6.chrUn_NW_020110134v1 15457 1 + 23766 T s opiHoa1.KK736084 120094 1 - 475300 C i opiHoa1.KK736084 N 0 C 0 e strCam1.KL206632 1110647 36 + 1250962 I e allMis1.JH733614 594175 8583 + 1203201 I e hg38.chr11 133524937 0 - 135086622 I a score=302.000000 s galGal6.chrUn_NW_020110134v1 15458 2 + 23766 TT s opiHoa1.KK736084 120095 2 - 475300 CT i opiHoa1.KK736084 C 0 N 0 s hg38.chr9 72963871 2 - 138394717 TT i hg38.chr9 I 1171 C 0 e strCam1.KL206632 1110647 36 + 1250962 I e allMis1.JH733614 594175 8583 + 1203201 I a score=44.000000 s galGal6.chrUn_NW_020110134v1 15460 4 + 23766 GGAG s hg38.chr9 72963873 4 - 138394717 GGGC i hg38.chr9 C 0 C 0 e strCam1.KL206632 1110647 36 + 1250962 I e allMis1.JH733614 594175 8583 + 1203201 I a score=608.000000 s galGal6.chrUn_NW_020110134v1 15464 5 + 23766 AGGGA s allMis1.JH733614 602758 5 + 1203201 AGGGA i allMis1.JH733614 I 8583 N 0 s hg38.chr9 72963877 5 - 138394717 CTGGA i hg38.chr9 C 0 C 0 e strCam1.KL206632 1110647 36 + 1250962 I a score=-14.000000 s galGal6.chrUn_NW_020110134v1 15469 2 + 23766 TG s hg38.chr9 72963882 2 - 138394717 GG i hg38.chr9 C 0 C 0 e strCam1.KL206632 1110647 36 + 1250962 I a score=-719.000000 s galGal6.chrUn_NW_020110134v1 15471 5 + 23766 GGTGG--- s strCam1.KL206632 1110683 5 + 1250962 CCTGG--- i strCam1.KL206632 I 36 I 19 s hg38.chr9 72963884 5 - 138394717 ---GGCAA i hg38.chr9 C 0 C 0 a score=367.000000 s galGal6.chrUn_NW_020110134v1 15476 17 + 23766 GGCCGGAGGCGGTGCCC---- s hg38.chr9 72963889 21 - 138394717 GGGCAGAGGCGCTTCCCGCAC i hg38.chr9 C 0 C 0 e strCam1.KL206632 1110688 19 + 1250962 I a score=38.000000 s galGal6.chrUn_NW_020110134v1 15493 1 + 23766 C s strCam1.KL206632 1110707 1 + 1250962 t i strCam1.KL206632 I 19 I 9 s hg38.chr9 72963910 1 - 138394717 C i hg38.chr9 C 0 C 0 a score=-42.000000 s galGal6.chrUn_NW_020110134v1 15494 9 + 23766 TGGAACACT s hg38.chr9 72963911 9 - 138394717 TGGTGGGCA i hg38.chr9 C 0 C 0 e strCam1.KL206632 1110708 9 + 1250962 I a score=-2114.000000 s galGal6.chrUn_NW_020110134v1 15503 26 + 23766 ---GCCACCACCC--GTGCAGGGCCCGGCGA s strCam1.KL206632 1110717 28 + 1250962 ---ttttttgcGAGGGTGCAAACCACGCAAA i strCam1.KL206632 I 9 I 17 s hg38.chr9 72963920 30 - 138394717 CTGATTTCCAGGA-GTTGCTGGACCTCTGGG i hg38.chr9 C 0 C 0 a score=47.000000 s galGal6.chrUn_NW_020110134v1 15529 17 + 23766 GAAGCCCAGGTTGT--GTC s hg38.chr9 72963950 19 - 138394717 GTGACCCAGGTGGCCCTCC i hg38.chr9 C 0 C 0 e strCam1.KL206632 1110745 17 + 1250962 I a score=573.000000 s galGal6.chrUn_NW_020110134v1 15546 2 + 23766 CA s strCam1.KL206632 1110762 2 + 1250962 CA i strCam1.KL206632 I 17 N 0 s hg38.chr9 72963969 2 - 138394717 CA i hg38.chr9 C 0 C 0 a score=1494.000000 s galGal6.chrUn_NW_020110134v1 15548 93 + 23766 CTGCCCA----------------------------------CTCACTCACTG------------CTGGGGGATTGCCGGCACAGGGGACACCTGGGACCGGGACTGAGGCGGTGACccgtggcagtgctgctctggatg s hg38.chr9 72963971 139 - 138394717 CAGCCCAGTGGTCAGGGAGCAGGGGCCTCACGTGCCCAGACCTACCTCATTGAGGGCAGGAAGCCTGAGGGATTCTGTGCACAGGGGAAGCCTGGGTCCAGGGCTGAGGCTTGTGCCTTCGTCCGCTCTGTCCTTGAGG i hg38.chr9 C 0 N 0 a score=-1529.000000 s galGal6.chrUn_NW_020110134v1 15641 190 + 23766 aGGCGGTCGGTGTGGAGACGGCCATTGAAGTtccacagaggctgcaggtgaTGTTGTGGCAGACGGTGGGCACAGTGACAGCCAGCGTGTCCACAGG----GCTGACAGTCACGCTGAGGCTGAAGTCTGCGACAAGGAGGATGGTGTCACCTTTGTGAGCCAAGCACGTGGCCCGGTGCGtgtccctccctcc s hg38.chr22 3608712 163 - 50818468 TGGCTGACGACATTGGG-------TTCAGGCCCAGCAAAGCCCAC---------------------TCATCCCACAGACA-CCGACGGCCCCATAAGCTTCGCTCCTGCTCGGGCCCCTGCCCAGGCCCTGGATGGCAGGAGCTGGCCCTCCCCTGTGGG-CAGGTGCAT-CCCTGGAGAGTGTGGAGACCTCT i hg38.chr22 N 0 C 0 a score=29.000000 s galGal6.chrUn_NW_020110134v1 15831 1 + 23766 t s melGal5.chrUn_NW_011217626v1 9488 1 - 52007 T i melGal5.chrUn_NW_011217626v1 N 0 N 0 s hg38.chr22 3608875 1 - 50818468 C i hg38.chr22 C 0 C 0 a score=256.000000 s galGal6.chrUn_NW_020110134v1 15832 101 + 23766 t---cctcgttctccatccctccccc----tatccatccctcctttcacctcccacctccctcccactcccacctcccaGTGT-GAGTATGTGTGGTGACTGAagcctt s hg38.chr22 3608876 100 - 50818468 TGGGGCTCGGTCCCCAGCCCTCCATAAAAGTATCCACTCAGCTTCTCCCCATAAGCCCCTCTGGTAAGGCC----CACAGTGTGGGGCAGGCGCAG-----GAGGCCTC i hg38.chr22 C 0 C 0 a score=-721.000000 s galGal6.chrUn_NW_020110134v1 15933 5 + 23766 tattc s strCam1.KL205875 377673 5 - 654266 CAGTC i strCam1.KL205875 N 0 N 0 s hg38.chr22 3608976 1 - 50818468 ---T- i hg38.chr22 C 0 C 0 a score=731.000000 s galGal6.chrUn_NW_020110134v1 15938 40 + 23766 tttttctttgctcaggagTGGGTAACGAGCTGGGCCTTCC s hg38.chr22 3608977 34 - 50818468 ------CCTGCCCAGGGCAGAGGACAGTTCTGAGCCTCCC i hg38.chr22 C 0 N 0 a score=145.000000 s galGal6.chrUn_NW_020110134v1 16328 2 + 23766 ta s pelCri1.JJRG01062154 8464 2 + 11714 GA i pelCri1.JJRG01062154 N 0 N 0 s capCar1.KL345392 32551 2 + 40007 GA i capCar1.KL345392 N 0 N 0 a score=-63.000000 s galGal6.chrUn_NW_020110134v1 16394 3 + 23766 tat s bucRhi1.KL503919 13059 3 - 18177 AGT i bucRhi1.KL503919 N 0 N 0 a score=1560.000000 s galGal6.chrUn_NW_020110134v1 16493 171 + 23766 ACAAAATTCAGTAAGAAGCAGAGGCAAATTTGCTCTCAAAGGTCACATTCTGGACTCTCCTGTTGCCTTCAATGGCCTCAACAACAGGCAATTTAGAAACTCCCTTTATACCCT-GCTTTAT-------GACTTCCATTCACCGTGGGTC-----AAAGCGGCTACGTGTAAGCAAAAATGCAA s oryLat2.chr6 12088142 177 + 26576615 ACAAGCGTCAGATAGAAGCAGGAGCAGATTTGCCCTGAAACCTGA-AGTATAAAGCCTCTAGTTGTGCTGCAGCACATC--CAACAGACTTTT----GTTTCCCTCTCCCCCCTCGTTTTGCAGTCGTGGATTTCAACTCATTGCAGCTTTGAGAGAAGGAGCTTTTGACAGGCAGGAAAGTAA i oryLat2.chr6 N 0 N 0 a score=569.000000 s galGal6.chrUn_NW_020110134v1 17257 30 + 23766 CTACCTCCAAA---CCGGCAGCGTGCGACTGCT s nanPar1.KN906062v1 1178642 33 - 1765914 CCACCTCACAAGAGCCTCTAGCCCATGACTGCC i nanPar1.KN906062v1 N 0 C 0 a score=665.000000 s galGal6.chrUn_NW_020110134v1 17287 13 + 23766 ---------TGGAGACTGACTG s thaSir1.NW_013659147v1 12477 13 + 304719 ---------TGGATTCTGTATA i thaSir1.NW_013659147v1 N 0 C 0 s nanPar1.KN906062v1 1178675 22 - 1765914 TCCAGGTAATGGATGATGTCTA i nanPar1.KN906062v1 C 0 C 0 a score=24451.000000 s galGal6.chrUn_NW_020110134v1 17300 198 + 23766 TGCCAGTCGGCCAGACCTACAGGAGGAACCATTGGACAGTGCTGAGGATTCCTGGGTTCATCCGACAGAAGCAGTGTTGTGAGACAAGgcaaccgtaaggcaggatatgcagtaactgctactgaccaGGTAATCGAA---CAACCATTGCCTGTGGGGACTT-GGCTCAGAAGGCTgcaataactgccttgacaagagcct s pytBiv1.KE955919 146837 199 - 159891 TGCCAGTCAACCAGATTTAAAGGATACCCCAATCCAGAATGCAGAGTATGAGT--CTTTA-CAGATGGGAGTAGTTTTGTGCAGGAAGGAATAAGAAAGGCTTGGTATGCAGTGGTAACCCTATGGGAGGTGACTGAGATGGGGCCACTACCTCCGGGTACCTCAGCCCAGTTGGCTGAAATTATAGCATCAACAACAGCCC i pytBiv1.KE955919 N 0 C 0 s thaSir1.NW_013659147v1 12490 200 + 304719 TGCCAATAGACCTGATCTTAGTGATCAGCCTCTCCCAAATGCTGACTGTGAAT-GGTTTA-CAGATGGTAGTAGCTTTATTATGGAAGGTCTGAGAAAGGCAGGATATGCAGTGGTCACACTGTGGGAAATTATAGAAGCCAAATCACTACCAGTAAACACTTCTGCTCAACTGGCTGAGCTGGTAGCTTTAACTAGAGCCT i thaSir1.NW_013659147v1 C 0 C 0 s nanPar1.KN906062v1 1178697 199 - 1765914 TGCAAGTCGGCCAGACTTAAAAGATAGACCCTTGGGAAGC-CAGATGTTGAGT-ACTTCA-CTGATGGCAGCAGCTTTGTAAAGGATGGGATCCGCTATGCTGGCTATGCAGTGGTGACACAGGAGACAGTGATAGAGGCAGGAGCCTTATCACAGGGAACCTCTGCATAAAAAGCGGAACTCATCGCTCTAACGAGAGCAT i nanPar1.KN906062v1 C 0 C 0 a score=910.000000 s galGal6.chrUn_NW_020110134v1 17498 1 + 23766 t s mesUni1.JJRI01093387 1787 1 - 2482 t i mesUni1.JJRI01093387 N 0 I 659 s pytBiv1.KE955919 147036 1 - 159891 T i pytBiv1.KE955919 C 0 C 0 s thaSir1.NW_013659147v1 12690 1 + 304719 T i thaSir1.NW_013659147v1 C 0 C 0 s nanPar1.KN906062v1 1178896 1 - 1765914 T i nanPar1.KN906062v1 C 0 C 0 a score=-17972.000000 s galGal6.chrUn_NW_020110134v1 17499 222 + 23766 aAAT------------------------ACATGGTCAGATGCTAAACATGCTTTTGGGG---TGGAACACGCTCATAGTgccatctggaaagagcaagga--ttgctcacacac------aagga---aaacattcagtatGA---------TGTACGCCTACCAAAGAGCAT------------------GGCTATTATACTctgtaaagga-------catcagaaaggtagcAC--------------TGTACgggaaactggagataag---atggcggatcaggtggcag------aacaggca-gttgaaga s pytBiv1.KE955919 147037 254 - 159891 GGAG-----TACAGGAAAGCTAGTAACAATATTTACAGATAGCAAGTATGCCTTTGGAG---TGGCCCATGCCCACAGGAGAATCTGGAAAGA--AAGGGGCCTATTGACAGCAGCTAATAAGGAGGTA------AAATATGGACCCCAGATATTGCGCCTACTTGAGGCAGT-------------------GCACTTGCCCATGTGAAGGCT-------CACTCAAAGGAAGATAC--------------TAAAACAGCAGATGGCAACAGG---AGAGTTGACATGGCAGCAGCCTTGCAACA-----GATGGCCA i pytBiv1.KE955919 C 0 C 0 s thaSir1.NW_013659147v1 12691 290 + 304719 AGAGCTGGCTGTAGGAATAACAGTAAATATTTACACAGATAGCAAATATGCTTTTGGAA---TCTTGCATGCCCATGGAGCTTTATGGAAGGA--AAGGA--TTATTAAATGTA------AAGGGGTCAACTATTAAGTATGGCCCACAAATTTTACAATTATTGGACACAGTCTGGCAGCCAAAAGAAGTAGCAGTCATACATGTCAAGGGG-------CATTCTAAGGAAGACACCCT------TTACACGAAAGGGAACCAGGCTGCAGA--TACGGCTGCTAAGGAAGCTGCCCTAGGACACGCAGAATGACCA i thaSir1.NW_013659147v1 C 0 C 0 s nanPar1.KN906062v1 1178897 223 - 1765914 ----------------------------------ACAACTAGC---------TTTGGAGACATTTTATATAAAGGCAGAACAA----GAATGGATACAGA--CTGATCCTGGGATGTAC-AAAGAGGAA------AAACCTGTCCCC-----TTTAGATGTACTCTACGGAAG-------------------ACCCCCACCCATCATAAAGGGAGATCTACACCAGATAGGGGGTATACTGAACTATGAAGTGTTACAGAAACTTGGGGAAAACATGCAGGAGATAGGGAAATGGGTTCAAGA--------------- i nanPar1.KN906062v1 C 0 N 0 e mesUni1.JJRI01093387 1788 659 - 2482 I a score=-13626.000000 s galGal6.chrUn_NW_020110134v1 17721 234 + 23766 a------ggctttaattccagacggtaaacttaaaatctcggaacctgagtcagaacctgtaaaatatccTACGGAGGATAGGAAT---------CTAATTAGTggtttaga-------------------agggaagagag-------------------caagctgacaga--------tgggttCACGCccagatggacacattgttGTGCCCGTTAGTATtg--------tatggaaattggttctaagggaagaT-----AAGAAAACATACTGCGGGAACAGAG------ACTACCAAGTAcaatcct s pytBiv1.KE955919 147291 232 - 159891 AGCAGCTGGCATTGATTGCCAAGCCCGAGTCTG----CTCTTCCCCC-AGGGGAGCCTCCATACCCACC---------ACAGGAAA------------ATGAGAGGCTCCAA----------AGGTGGGAAGGGGTAGAGAG-------------------AGACCTATAAGG--------ATGGTGGAGGCTTGGGGATAAGGTTGTTCTG--CCACAAGCAGTG-------TTGTGGCA---TATTCTGAAAGAGACCCATGGAAGAACTTGCAT---GGGACCTCAG----GCACTGGCTAACTCAATTCT i pytBiv1.KE955919 C 0 I 941 s thaSir1.NW_013659147v1 12981 285 + 304719 G-----TTTCCCTAATTCCAATGTCTCCATCCATACCCACTTCCCC--------GCCCTCTTATATACCCT----GGGACAGGAAATGGGCCACATTTATTGGAGGCATGGAGGGGAATGATGGGTGGTGGAGGGTAGAGAACAAATTTATTCTACCAGATACACCTCTAAGAATTACTTTATAAGAAATGCATGCAGGCACACATTGTGGG--TCAAAAGCACTGGTAGATTTTATGACA---TGCTGTGTAGTAGGC------AAGGATTTCTATTCCGCTATCTCCAAGCTGTAGCAGCTTTTCCGATCT- i thaSir1.NW_013659147v1 C 0 C 0 e mesUni1.JJRI01093387 1788 659 - 2482 I a score=-259.000000 s galGal6.chrUn_NW_020110134v1 17955 36 + 23766 agtaccaggaacagggtacaagtgggc---------ctactggga---------- s thaSir1.NW_013659147v1 13266 54 + 304719 -GTGCCAGAAATAATCCAAAAGTAGACAGGCACCCACCCCTATGAGTCCAACTTG i thaSir1.NW_013659147v1 C 0 C 0 e mesUni1.JJRI01093387 1788 659 - 2482 I e pytBiv1.KE955919 147523 941 - 159891 I a score=2099.000000 s galGal6.chrUn_NW_020110134v1 17991 38 + 23766 ---aagggaacctgccagggcaacaatggcaaattgatttc s pytBiv1.KE955919 148464 39 - 159891 AGGGGAGCA--TATCCAGGAGCAAATTGGGAGGTGGACTTC i pytBiv1.KE955919 I 941 C 0 s thaSir1.NW_013659147v1 13320 38 + 304719 ---ACAGCAACTACCCAGGGACAATTTGAGAAATAGACTTC i thaSir1.NW_013659147v1 C 0 C 0 e mesUni1.JJRI01093387 1788 659 - 2482 I a score=1520.000000 s galGal6.chrUn_NW_020110134v1 18029 6 + 23766 tcagaa s mesUni1.JJRI01093387 2447 6 - 2482 acagaa i mesUni1.JJRI01093387 I 659 N 0 s pytBiv1.KE955919 148503 6 - 159891 ACTGAG i pytBiv1.KE955919 C 0 C 0 s thaSir1.NW_013659147v1 13358 6 + 304719 ACTGAA i thaSir1.NW_013659147v1 C 0 C 0 a score=7960.000000 s galGal6.chrUn_NW_020110134v1 18035 137 + 23766 ctcccaagaaaaggcgggggggcggggggtaTATTGCGGTATGTTGGTCCT----GATAGCTTTTTAGGGTGGCTGGAGGCATTCCCTCGTAGGACTAATAAGGCATGTGAGGT-----AAGTATTGTTGCAGGAGGTTATTCCAA s pytBiv1.KE955919 148509 133 - 159891 CTACCAAAAA----------GCCAGGG---ATATAAATATTTGCTGGTCCTAATTGACACCTTTTCTGGCTGGGTTGAAGCCTTTCCTTGTCGGACCAATAAGGCCCAGGAGGTGGCGAAGGCACTATTGAAAGAGATTATCCCAA i pytBiv1.KE955919 C 0 N 0 s thaSir1.NW_013659147v1 13364 122 + 304719 TTACCTAGAA----------AGCAagg---ttttaaatttattttgggaCTA---GAAA--------GGATGGCCTGAGGCTTTTGCTTGCAGGACTAATAAAGATCATGAAGTAGTAAACATCCtattggaagaaattattttta i thaSir1.NW_013659147v1 C 0 C 0 a score=302.000000 s galGal6.chrUn_NW_020110134v1 18172 28 + 23766 GATGCCGGGGAACTACTTGGTCTGCCAA s thaSir1.NW_013659147v1 13486 15 + 304719 ggT-------------TTGGACTGCCAA i thaSir1.NW_013659147v1 C 0 N 0 a score=-901.000000 s galGal6.chrUn_NW_020110134v1 18202 81 + 23766 AAAGTGCACCGTCAAA------------------AGTTAAACTCATCGAGACAAGATGAGCTGGTTACTAATTTGCTTTATCTCAATGGAC---GCGGGAGG s thaSir1.NW_013659596v1 15109 99 - 210059 ATAGTATATCATTTGACTGTGACCCATATTTCATAGCTAAAGTTTGTGTGAACAGTTAAAC--ATCATTTGGAAGCTTCA-CTCAGTCTACCATATGGTAAG i thaSir1.NW_013659596v1 N 0 C 0 a score=-1403.000000 s galGal6.chrUn_NW_020110134v1 18283 62 + 23766 -TGTTCTGGCCTGGGAAGAGA----GCTCCTTTTACAGTG-------TAATTAGTAACTGTGCTAAGACTTCAA s picPub1.KL214959 22029 62 - 34951 -TATTGAGGGATGGGAACGAA----ATATGTATTGAAATG------CTAGTCAAGAACTG-GCTTTGCAAACTA i picPub1.KL214959 N 0 C 0 s thaSir1.NW_013659596v1 15208 69 - 210059 TTgtccag---tggggaaaaaaatgacatgatttaTAAAGCAACAGCTAGCTA--AACTATGCCAGGAGGTTCA i thaSir1.NW_013659596v1 C 0 C 0 a score=-2268.000000 s galGal6.chrUn_NW_020110134v1 18345 4 + 23766 ACTT--- s opiHoa1.KK733750 1103831 4 - 1149234 GAGC--- i opiHoa1.KK733750 N 0 I 65 s picPub1.KL214959 22091 3 - 34951 -ATC--- i picPub1.KL214959 C 0 I 1 s thaSir1.NW_013659596v1 15277 4 - 210059 ---CCTG i thaSir1.NW_013659596v1 C 0 C 0 a score=1988.000000 s galGal6.chrUn_NW_020110134v1 18349 25 + 23766 CTCTGACTGCTGGATCTGCACATGA s picPub1.KL214959 22095 25 - 34951 TTCTAACTGTTGGATATGCACCGAA i picPub1.KL214959 I 1 C 0 s thaSir1.NW_013659596v1 15281 25 - 210059 TTCTCACCGCAAACTTTGCCACTGA i thaSir1.NW_013659596v1 C 0 N 0 e opiHoa1.KK733750 1103835 65 - 1149234 I a score=225.000000 s galGal6.chrUn_NW_020110134v1 18374 13 + 23766 CT--ACCAAAGGCAG s picPub1.KL214959 22120 15 - 34951 CTTCCCCAAAGCCAA i picPub1.KL214959 C 0 C 0 e opiHoa1.KK733750 1103835 65 - 1149234 I a score=174.000000 s galGal6.chrUn_NW_020110134v1 18387 18 + 23766 GG-ATGGACGTACCATGCT s araMac1.AOUJ01130674 921 19 - 2134 GACATGGCCGCCCTATACT i araMac1.AOUJ01130674 N 0 N 0 s picPub1.KL214959 22135 16 - 34951 ---ATGAGGACCCCGCTAT i picPub1.KL214959 C 0 C 0 e opiHoa1.KK733750 1103835 65 - 1149234 I a score=434.000000 s galGal6.chrUn_NW_020110134v1 18405 9 + 23766 TTGGGGTCC s picPub1.KL214959 22151 9 - 34951 TTGGGGTAG i picPub1.KL214959 C 0 C 0 e opiHoa1.KK733750 1103835 65 - 1149234 I a score=-919.000000 s galGal6.chrUn_NW_020110134v1 18414 10 + 23766 CG--TCACTAAA s opiHoa1.KK733750 1103900 11 - 1149234 GGT-TTACTCAT i opiHoa1.KK733750 I 65 I 8 s picPub1.KL214959 22160 10 - 34951 --CTTCAATGAA i picPub1.KL214959 C 0 C 0 a score=328.000000 s galGal6.chrUn_NW_020110134v1 18424 7 + 23766 TTGACCT s picPub1.KL214959 22170 7 - 34951 TTGGACT i picPub1.KL214959 C 0 N 0 e opiHoa1.KK733750 1103911 8 - 1149234 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 18431 5 + 23766 GCTCA e opiHoa1.KK733750 1103911 8 - 1149234 I a score=166.000000 s galGal6.chrUn_NW_020110134v1 18436 4 + 23766 GCAC s opiHoa1.KK733750 1103919 4 - 1149234 GGAC i opiHoa1.KK733750 I 8 I 17 a score=0.000000 s galGal6.chrUn_NW_020110134v1 18440 19 + 23766 AAACATAAAAGCGGTCAGA e opiHoa1.KK733750 1103923 17 - 1149234 I a score=-634.000000 s galGal6.chrUn_NW_020110134v1 18459 9 + 23766 GGGAGCCCA s opiHoa1.KK733750 1103940 3 - 1149234 G------TT i opiHoa1.KK733750 I 17 I 14 a score=0.000000 s galGal6.chrUn_NW_020110134v1 18468 14 + 23766 TTTGCTTAGGGGCA e opiHoa1.KK733750 1103943 14 - 1149234 I a score=-51.000000 s galGal6.chrUn_NW_020110134v1 18482 6 + 23766 Ggtgag s opiHoa1.KK733750 1103957 6 - 1149234 TTGGAG i opiHoa1.KK733750 I 14 N 0 a score=91.000000 s galGal6.chrUn_NW_020110134v1 18564 1 + 23766 A s melGal5.chrUn_NW_011152221v1 17151 1 - 20140 A i melGal5.chrUn_NW_011152221v1 N 0 N 0 a score=168.000000 s galGal6.chrUn_NW_020110134v1 18663 4 + 23766 GCTT s cotJap2.chr3 79236524 4 + 100941466 TCTT i cotJap2.chr3 N 0 N 0 a score=-570.000000 s galGal6.chrUn_NW_020110134v1 18909 6 + 23766 CA---CACA s melGal5.chr24 118637 9 - 4088881 AAAGTCAGT i melGal5.chr24 N 0 I 3332 a score=0.000000 s galGal6.chrUn_NW_020110134v1 18915 517 + 23766 GCATTGTAGAACGATCCATCCCAGATGGGAACAAGGCCACAAGGCACCATCTTCACAGCTGATCAGAGAGGAGTCTAggatggtttggggttgggacaGTTACCCTGAGAACTGCTGTTACCCCACTGACATCACAGCAATGAAGGGGAGGGGCAAGGAGGGgccctccctctgccccgctTTACCTCATTATCTTCCTTCCCACCTTAAACAGGGCATCCAACTGAGGGGTTTGGgacccctccctgccccactggaCCCCGTAAACCTGATAGGTGGGCAACGGACCTCACTGACCCATTCTACTCCATAGAGCCCAATCCCTCCTGTAAGAAGGGGACCCATACGGCAAGGACTTctctcaccccacatcccactaaAAGGGGGCAACAGACCACCATACCCAAGATCCATCCTGCACCACagaccccatcaccccatcccaaATGGACAGAGGATCCAGGGATCCAGCACTCCCCATGCCAGAGCCATGGAACTGAGCCTCCTCCAAAGGTTC e melGal5.chr24 118646 3332 - 4088881 I a score=351.000000 s galGal6.chrUn_NW_020110134v1 19432 5 + 23766 TGGGT s gavSte1.JJRM01006257 10524 5 - 20129 TGGAT i gavSte1.JJRM01006257 N 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-479.000000 s galGal6.chrUn_NW_020110134v1 19437 12 + 23766 TCTGT---AGCAGCC s tauEry1.KL466384 45760 14 - 65150 TCTGTTC-AACAGAT i tauEry1.KL466384 N 0 C 0 s gavSte1.JJRM01006257 10529 12 - 20129 TCTGTTTGAACT--- i gavSte1.JJRM01006257 C 0 N 0 e melGal5.chr24 118646 3332 - 4088881 I a score=366.000000 s galGal6.chrUn_NW_020110134v1 19449 10 + 23766 AAGAGAGTGG s tauEry1.KL466384 45774 10 - 65150 ATAGGGGTGG i tauEry1.KL466384 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-73.000000 s galGal6.chrUn_NW_020110134v1 19459 68 + 23766 CTCCAG---CCAATGGGACGT----GGGTTCTGTACCCCCAGGGCCAC-----CCCCACTGGTCC------CCATGGAGGGAGTGG s tauEry1.KL466384 45784 69 - 65150 TTGAAGTTCCCCATGAGGACT----AGGGGCTGTGAATGTGACGCTAC-----TCCCacctgtct--------gtagagggcctgA i tauEry1.KL466384 C 0 I 7 s thaSir1.NW_013660008v1 14961 83 + 149140 CTTCTG---GCCATGGGACCTTTACAGGACCTTCACGCCCGGCTCCACAGGATTCCCACTGTCCTAGAACCCTTTGGGGAGAGTTG i thaSir1.NW_013660008v1 N 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-2661.000000 s galGal6.chrUn_NW_020110134v1 19527 7 + 23766 GGCCTGG- s tauEry1.KL466384 45860 7 - 65150 GTTCAGG- i tauEry1.KL466384 I 7 C 0 s egrGar1.KK501249 589667 6 + 4457039 CTTCTT-- i egrGar1.KK501249 N 0 I 11 s thaSir1.NW_013660008v1 15044 2 + 149140 ------GG i thaSir1.NW_013660008v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-11.000000 s galGal6.chrUn_NW_020110134v1 19534 9 + 23766 GGGC---------ACACT s tauEry1.KL466384 45867 18 - 65150 TGGCTTATAGCAGACACT i tauEry1.KL466384 C 0 C 0 e egrGar1.KK501249 589673 11 + 4457039 I e thaSir1.NW_013660008v1 15046 0 + 149140 C e melGal5.chr24 118646 3332 - 4088881 I a score=34.000000 s galGal6.chrUn_NW_020110134v1 19543 3 + 23766 GGT s tauEry1.KL466384 45885 3 - 65150 CGC i tauEry1.KL466384 C 0 C 0 s phaCar1.KL444500 3415 3 - 29006 CAC i phaCar1.KL444500 N 0 C 0 s thaSir1.NW_013660008v1 15046 2 + 149140 -GT i thaSir1.NW_013660008v1 C 0 C 0 e egrGar1.KK501249 589673 11 + 4457039 I e melGal5.chr24 118646 3332 - 4088881 I a score=33.000000 s galGal6.chrUn_NW_020110134v1 19546 2 + 23766 CT s tauEry1.KL466384 45888 2 - 65150 TA i tauEry1.KL466384 C 0 C 0 s phaCar1.KL444500 3418 2 - 29006 CC i phaCar1.KL444500 C 0 C 0 s egrGar1.KK501249 589684 2 + 4457039 TT i egrGar1.KK501249 I 11 N 0 s thaSir1.NW_013660008v1 15048 2 + 149140 CC i thaSir1.NW_013660008v1 C 0 C 0 s petMar3.PIZI01000091v1 715914 2 + 1484368 ct i petMar3.PIZI01000091v1 N 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-6282.000000 s galGal6.chrUn_NW_020110134v1 19548 13 + 23766 TT-GAGgcagaaat s tauEry1.KL466384 45890 6 - 65150 T--------AATAT i tauEry1.KL466384 C 0 C 0 s phaCar1.KL444500 3420 2 - 29006 ------------AC i phaCar1.KL444500 C 0 C 0 s thaSir1.NW_013660008v1 15050 13 + 149140 -AAGAGGCAGGGAC i thaSir1.NW_013660008v1 C 0 I 10 s petMar3.PIZI01000091v1 715916 11 + 1484368 -TTGAAGAAGAA-- i petMar3.PIZI01000091v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=187.000000 s galGal6.chrUn_NW_020110134v1 19561 1 + 23766 c s tauEry1.KL466384 45896 1 - 65150 C i tauEry1.KL466384 C 0 C 0 s phaCar1.KL444500 3422 1 - 29006 T i phaCar1.KL444500 C 0 I 155 s balPav1.KL484327 22484 1 + 26785 T i balPav1.KL484327 N 0 C 0 s thaSir1.NW_013660008v1 15073 1 + 149140 T i thaSir1.NW_013660008v1 I 10 C 0 e melGal5.chr24 118646 3332 - 4088881 I e petMar3.PIZI01000091v1 715927 0 + 1484368 C a score=-105.000000 s galGal6.chrUn_NW_020110134v1 19562 9 + 23766 atattttcc s tauEry1.KL466384 45897 9 - 65150 ATCTTTACC i tauEry1.KL466384 C 0 C 0 s balPav1.KL484327 22485 9 + 26785 ATAATGCCA i balPav1.KL484327 C 0 N 0 s thaSir1.NW_013660008v1 15074 9 + 149140 Gcatctcct i thaSir1.NW_013660008v1 C 0 I 1 s petMar3.PIZI01000091v1 715927 2 + 1484368 -------CC i petMar3.PIZI01000091v1 C 0 C 0 e phaCar1.KL444500 3423 155 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=-8358.000000 s galGal6.chrUn_NW_020110134v1 19571 56 + 23766 -tgTTGATCTCTCCA---CCCACCTGTA--TTTACATCCACCCtttcatcca---acaatc---gttc------- s tauEry1.KL466384 45906 66 - 65150 -TGTC-CTCTCTTTAATCCTTACCCGTAAACTCTCAGTTGGCTTCTCATCCATGCCCAGtcagagctc------- i tauEry1.KL466384 C 0 C 0 s thaSir1.NW_013660008v1 15084 56 + 149140 -tctc-cttcccccc---tccccctgcagaaGCACATGGACGCCTACGTGAG----CGACT---GCTA------- i thaSir1.NW_013660008v1 I 1 C 0 s petMar3.PIZI01000091v1 715929 62 + 1484368 TCGTG-CACTTATCC---CCCTCCTCCA---TTGCCCTAACCCTCGCACTGT---ACACTA---GCTGTCTAGCC i petMar3.PIZI01000091v1 C 0 C 0 e phaCar1.KL444500 3423 155 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=476.000000 s galGal6.chrUn_NW_020110134v1 19627 1 + 23766 c s tauEry1.KL466384 45972 1 - 65150 c i tauEry1.KL466384 C 0 C 0 s pteGut1.JMFR01007037 4199 1 - 19102 t i pteGut1.JMFR01007037 N 0 I 9 s thaSir1.NW_013660008v1 15140 1 + 149140 C i thaSir1.NW_013660008v1 C 0 I 2 s petMar3.PIZI01000091v1 715991 1 + 1484368 C i petMar3.PIZI01000091v1 C 0 C 0 e phaCar1.KL444500 3423 155 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=-1885.000000 s galGal6.chrUn_NW_020110134v1 19628 8 + 23766 gtccatcc- s tauEry1.KL466384 45973 8 - 65150 atgcactc- i tauEry1.KL466384 C 0 C 0 s thaSir1.NW_013660008v1 15143 7 + 149140 CAGCATC-- i thaSir1.NW_013660008v1 I 2 C 0 s petMar3.PIZI01000091v1 715992 8 + 1484368 -TCCTTTCC i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4200 9 - 19102 I e phaCar1.KL444500 3423 155 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=-4541.000000 s galGal6.chrUn_NW_020110134v1 19636 11 + 23766 aa-----tgatccttc s tauEry1.KL466384 45981 13 - 65150 cag---ctgctctctt i tauEry1.KL466384 C 0 I 12 s pteGut1.JMFR01007037 4209 11 - 19102 aa-----agagcccAT i pteGut1.JMFR01007037 I 9 I 9 s petMar3.PIZI01000091v1 716000 11 + 1484368 --AACACTGAGGC--- i petMar3.PIZI01000091v1 C 0 C 0 e phaCar1.KL444500 3423 155 - 29006 I e thaSir1.NW_013660008v1 15150 0 + 149140 C e melGal5.chr24 118646 3332 - 4088881 I a score=-202.000000 s galGal6.chrUn_NW_020110134v1 19647 9 + 23766 -aatccgttt s tauEry1.KL466384 46006 9 - 65150 -ACTCCCCTT i tauEry1.KL466384 I 12 C 0 s thaSir1.NW_013660008v1 15150 7 + 149140 ---GCCGTCT i thaSir1.NW_013660008v1 C 0 I 4 s petMar3.PIZI01000091v1 716011 10 + 1484368 TATCCTCCCT i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4220 9 - 19102 I e phaCar1.KL444500 3423 155 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=-2445.000000 s galGal6.chrUn_NW_020110134v1 19656 9 + 23766 ttccatcca- s tauEry1.KL466384 46015 9 - 65150 TCTCATCTT- i tauEry1.KL466384 C 0 C 0 s pteGut1.JMFR01007037 4229 9 - 19102 CTGCAACAC- i pteGut1.JMFR01007037 I 9 I 66 s thaSir1.NW_013660008v1 15161 5 + 149140 CTGCA----- i thaSir1.NW_013660008v1 I 4 C 0 s petMar3.PIZI01000091v1 716021 9 + 1484368 -TTCAATTCC i petMar3.PIZI01000091v1 C 0 C 0 e phaCar1.KL444500 3423 155 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=-5387.000000 s galGal6.chrUn_NW_020110134v1 19665 30 + 23766 tccatccatcatcc---------atccatccatccatcc s tauEry1.KL466384 46024 28 - 65150 CCCatcc--tgtcc---------ttcctaaaggTCCTGT i tauEry1.KL466384 C 0 C 0 s thaSir1.NW_013660008v1 15166 21 + 149140 TCCACAT--C-------------GTCCTGCGCTTCA--- i thaSir1.NW_013660008v1 C 0 C 0 s petMar3.PIZI01000091v1 716030 32 + 1484368 TCTATCC--TTTCCCCAATTGGAAACCT--AGCTCA--- i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4238 66 - 19102 I e phaCar1.KL444500 3423 155 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=-4096.000000 s galGal6.chrUn_NW_020110134v1 19695 14 + 23766 atccatccgtccgt s tauEry1.KL466384 46052 13 - 65150 ACCCCTCTGTT-GT i tauEry1.KL466384 C 0 C 0 s phaCar1.KL444500 3578 10 - 29006 AGGAGCCTGT---- i phaCar1.KL444500 I 155 I 8 s thaSir1.NW_013660008v1 15187 4 + 149140 AGGC---------- i thaSir1.NW_013660008v1 C 0 C 0 s petMar3.PIZI01000091v1 716062 14 + 1484368 AGCAATCTGTACAT i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4238 66 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=30.000000 s galGal6.chrUn_NW_020110134v1 19709 8 + 23766 ccccgtcc s tauEry1.KL466384 46065 8 - 65150 GACACTCC i tauEry1.KL466384 C 0 C 0 s thaSir1.NW_013660008v1 15191 5 + 149140 ---CCTCG i thaSir1.NW_013660008v1 C 0 I 3 s petMar3.PIZI01000091v1 716076 7 + 1484368 -CCTCTCC i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4238 66 - 19102 I e phaCar1.KL444500 3588 8 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=164.000000 s galGal6.chrUn_NW_020110134v1 19717 2 + 23766 at s anaPla1.KB743958 345315 2 + 353638 AG i anaPla1.KB743958 N 0 I 29 s tauEry1.KL466384 46073 2 - 65150 AG i tauEry1.KL466384 C 0 C 0 s thaSir1.NW_013660008v1 15199 2 + 149140 GG i thaSir1.NW_013660008v1 I 3 C 0 s petMar3.PIZI01000091v1 716083 2 + 1484368 AA i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4238 66 - 19102 I e phaCar1.KL444500 3588 8 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=-5654.000000 s galGal6.chrUn_NW_020110134v1 19719 10 + 23766 ccat-----ccatcc- s tauEry1.KL466384 46075 15 - 65150 CTGTGGGACCCTTCC- i tauEry1.KL466384 C 0 C 0 s phaCar1.KL444500 3596 6 - 29006 ---------CCATTA- i phaCar1.KL444500 I 8 I 17 s thaSir1.NW_013660008v1 15201 10 + 149140 -----AAGCGCAACG- i thaSir1.NW_013660008v1 C 0 I 1 s petMar3.PIZI01000091v1 716085 8 + 1484368 --------CCTGGCGT i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4238 66 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I e anaPla1.KB743958 345317 29 + 353638 I a score=-1663.000000 s galGal6.chrUn_NW_020110134v1 19729 2 + 23766 at s tauEry1.KL466384 46090 2 - 65150 CA i tauEry1.KL466384 C 0 C 0 s thaSir1.NW_013660008v1 15212 1 + 149140 C- i thaSir1.NW_013660008v1 I 1 I 4 s petMar3.PIZI01000091v1 716093 1 + 1484368 -T i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4238 66 - 19102 I e phaCar1.KL444500 3602 17 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I e anaPla1.KB743958 345317 29 + 353638 I a score=-5947.000000 s galGal6.chrUn_NW_020110134v1 19731 8 + 23766 ------ccatcca-----t s tauEry1.KL466384 46092 13 - 65150 ------CCATGTGCCTGTT i tauEry1.KL466384 C 0 C 0 s pteGut1.JMFR01007037 4304 6 - 19102 ------acaAGT------- i pteGut1.JMFR01007037 I 66 I 5 s thaSir1.NW_013660008v1 15217 4 + 149140 ------CCAT--------- i thaSir1.NW_013660008v1 I 4 C 0 s petMar3.PIZI01000091v1 716094 8 + 1484368 CCACTGCC----------- i petMar3.PIZI01000091v1 C 0 C 0 e phaCar1.KL444500 3602 17 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I e anaPla1.KB743958 345317 29 + 353638 I a score=548.000000 s galGal6.chrUn_NW_020110134v1 19739 2 + 23766 cc s tauEry1.KL466384 46105 2 - 65150 CC i tauEry1.KL466384 C 0 C 0 s thaSir1.NW_013660008v1 15221 1 + 149140 -C i thaSir1.NW_013660008v1 C 0 I 2 s petMar3.PIZI01000091v1 716102 2 + 1484368 TC i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4310 5 - 19102 I e phaCar1.KL444500 3602 17 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I e anaPla1.KB743958 345317 29 + 353638 I a score=-287.000000 s galGal6.chrUn_NW_020110134v1 19741 1 + 23766 a s tauEry1.KL466384 46107 1 - 65150 C i tauEry1.KL466384 C 0 C 0 s phaCar1.KL444500 3619 1 - 29006 G i phaCar1.KL444500 I 17 C 0 s pteGut1.JMFR01007037 4315 1 - 19102 A i pteGut1.JMFR01007037 I 5 I 36 s petMar3.PIZI01000091v1 716104 1 + 1484368 A i petMar3.PIZI01000091v1 C 0 C 0 e thaSir1.NW_013660008v1 15222 2 + 149140 I e melGal5.chr24 118646 3332 - 4088881 I e anaPla1.KB743958 345317 29 + 353638 I a score=180.000000 s galGal6.chrUn_NW_020110134v1 19742 1 + 23766 a s tauEry1.KL466384 46108 1 - 65150 G i tauEry1.KL466384 C 0 C 0 s phaCar1.KL444500 3620 1 - 29006 A i phaCar1.KL444500 C 0 I 64 s petMar3.PIZI01000091v1 716105 1 + 1484368 A i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4316 36 - 19102 I e thaSir1.NW_013660008v1 15222 2 + 149140 I e melGal5.chr24 118646 3332 - 4088881 I e anaPla1.KB743958 345317 29 + 353638 I a score=-912.000000 s galGal6.chrUn_NW_020110134v1 19743 5 + 23766 ---ccaAC s tauEry1.KL466384 46109 5 - 65150 ---CCAAT i tauEry1.KL466384 C 0 I 1 s pytBiv1.KE963723 1690 5 + 11496 ---cctAT i pytBiv1.KE963723 N 0 C 0 s thaSir1.NW_013660008v1 15224 5 + 149140 ---CAAGT i thaSir1.NW_013660008v1 I 2 I 1 s petMar3.PIZI01000091v1 716106 5 + 1484368 CTCCC--- i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4316 36 - 19102 I e phaCar1.KL444500 3621 64 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I e anaPla1.KB743958 345317 29 + 353638 I a score=-1390.000000 s galGal6.chrUn_NW_020110134v1 19748 1 + 23766 -A s anaPla1.KB743958 345346 1 + 353638 -A i anaPla1.KB743958 I 29 N 0 s tauEry1.KL466384 46115 1 - 65150 -A i tauEry1.KL466384 I 1 C 0 s pytBiv1.KE963723 1695 1 + 11496 -A i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15230 1 + 149140 -A i thaSir1.NW_013660008v1 I 1 C 0 s petMar3.PIZI01000091v1 716111 1 + 1484368 T- i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4316 36 - 19102 I e phaCar1.KL444500 3621 64 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=-646.000000 s galGal6.chrUn_NW_020110134v1 19749 13 + 23766 GTtctctcctctg s tauEry1.KL466384 46116 13 - 65150 GTTCCCGCAACTG i tauEry1.KL466384 C 0 C 0 s pytBiv1.KE963723 1696 7 + 11496 GCCCTCT------ i pytBiv1.KE963723 C 0 I 1 s thaSir1.NW_013660008v1 15231 7 + 149140 Gccccct------ i thaSir1.NW_013660008v1 C 0 I 1 s petMar3.PIZI01000091v1 716112 12 + 1484368 Gttcactcccct- i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4316 36 - 19102 I e phaCar1.KL444500 3621 64 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=-3391.000000 s galGal6.chrUn_NW_020110134v1 19762 3 + 23766 ttg s tauEry1.KL466384 46129 3 - 65150 CAC i tauEry1.KL466384 C 0 C 0 s eurHel1.KK561818 70497 3 - 89473 gAG i eurHel1.KK561818 N 0 C 0 s pytBiv1.KE963723 1704 2 + 11496 TT- i pytBiv1.KE963723 I 1 C 0 s thaSir1.NW_013660008v1 15239 2 + 149140 tt- i thaSir1.NW_013660008v1 I 1 C 0 e pteGut1.JMFR01007037 4316 36 - 19102 I e phaCar1.KL444500 3621 64 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I e petMar3.PIZI01000091v1 716124 0 + 1484368 C a score=133.000000 s galGal6.chrUn_NW_020110134v1 19765 3 + 23766 atc s tauEry1.KL466384 46132 3 - 65150 ACA i tauEry1.KL466384 C 0 C 0 s eurHel1.KK561818 70500 3 - 89473 ATT i eurHel1.KK561818 C 0 N 0 s apaSpi1.APJP01494108 6448 3 - 7680 ACT i apaSpi1.APJP01494108 N 0 I 2 s pytBiv1.KE963723 1706 3 + 11496 ATG i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15241 3 + 149140 gcc i thaSir1.NW_013660008v1 C 0 C 0 e pteGut1.JMFR01007037 4316 36 - 19102 I e phaCar1.KL444500 3621 64 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I e petMar3.PIZI01000091v1 716124 0 + 1484368 C a score=-7831.000000 s galGal6.chrUn_NW_020110134v1 19768 17 + 23766 cctctctccatc------------------tattt s tauEry1.KL466384 46135 17 - 65150 GATCTCATCATA------------------TTTAT i tauEry1.KL466384 C 0 C 0 s apaSpi1.APJP01494108 6453 15 - 7680 tatttcttcctg------------------ttt-- i apaSpi1.APJP01494108 I 2 I 2 s pytBiv1.KE963723 1709 24 + 11496 TACTTGAACACt-----------aatatcatgttt i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15244 17 + 149140 cccctccccatc------------------tgttc i thaSir1.NW_013660008v1 C 0 C 0 s petMar3.PIZI01000091v1 716124 31 + 1484368 --cctccctacTATGGTACTGGAAAAGCGCTTT-- i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4316 36 - 19102 I e phaCar1.KL444500 3621 64 - 29006 I e melGal5.chr24 118646 3332 - 4088881 I a score=67.000000 s galGal6.chrUn_NW_020110134v1 19785 1 + 23766 c s pytBiv1.KE963723 1733 1 + 11496 t i pytBiv1.KE963723 C 0 I 1 s thaSir1.NW_013660008v1 15261 1 + 149140 T i thaSir1.NW_013660008v1 C 0 I 1 s petMar3.PIZI01000091v1 716155 1 + 1484368 C i petMar3.PIZI01000091v1 C 0 C 0 e apaSpi1.APJP01494108 6468 2 - 7680 I e pteGut1.JMFR01007037 4316 36 - 19102 I e phaCar1.KL444500 3621 64 - 29006 I e tauEry1.KL466384 46152 0 - 65150 C e melGal5.chr24 118646 3332 - 4088881 I a score=-6293.000000 s galGal6.chrUn_NW_020110134v1 19786 9 + 23766 tctctcca---g s tauEry1.KL466384 46152 6 - 65150 --TCCCCA---- i tauEry1.KL466384 C 0 C 0 s phaCar1.KL444500 3685 9 - 29006 --TGTTTATGC- i phaCar1.KL444500 I 64 I 1 s pteGut1.JMFR01007037 4352 2 - 19102 ------TA---- i pteGut1.JMFR01007037 I 36 C 0 s apaSpi1.APJP01494108 6470 8 - 7680 tcccccAA---- i apaSpi1.APJP01494108 I 2 I 1 s pytBiv1.KE963723 1735 8 + 11496 tttctcca---- i pytBiv1.KE963723 I 1 I 2 s thaSir1.NW_013660008v1 15263 8 + 149140 CTCCCCAA---- i thaSir1.NW_013660008v1 I 1 I 2 s petMar3.PIZI01000091v1 716156 6 + 1484368 --ACCCTG---- i petMar3.PIZI01000091v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=600.000000 s galGal6.chrUn_NW_020110134v1 19795 1 + 23766 c s pytBiv1.KE963723 1745 1 + 11496 c i pytBiv1.KE963723 I 2 I 6 s thaSir1.NW_013660008v1 15273 1 + 149140 C i thaSir1.NW_013660008v1 I 2 I 2 s petMar3.PIZI01000091v1 716162 1 + 1484368 C i petMar3.PIZI01000091v1 C 0 C 0 e apaSpi1.APJP01494108 6478 1 - 7680 I e pteGut1.JMFR01007037 4354 0 - 19102 C e phaCar1.KL444500 3694 1 - 29006 I e tauEry1.KL466384 46158 0 - 65150 C e melGal5.chr24 118646 3332 - 4088881 I a score=-1306.000000 s galGal6.chrUn_NW_020110134v1 19796 5 + 23766 tctcc--- s tauEry1.KL466384 46158 2 - 65150 ---TC--- i tauEry1.KL466384 C 0 C 0 s phaCar1.KL444500 3695 2 - 29006 ---CC--- i phaCar1.KL444500 I 1 N 0 s apaSpi1.APJP01494108 6479 2 - 7680 ---TC--- i apaSpi1.APJP01494108 I 1 I 9 s pytBiv1.KE963723 1752 3 + 11496 T--CC--- i pytBiv1.KE963723 I 6 C 0 s thaSir1.NW_013660008v1 15276 3 + 149140 T--CC--- i thaSir1.NW_013660008v1 I 2 C 0 s petMar3.PIZI01000091v1 716163 5 + 1484368 ---CCTTC i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4354 0 - 19102 C e melGal5.chr24 118646 3332 - 4088881 I a score=-16311.000000 s galGal6.chrUn_NW_020110134v1 19801 9 + 23766 -------ctctGCACA s tauEry1.KL466384 46160 9 - 65150 -------CTGTGTGCA i tauEry1.KL466384 C 0 C 0 s pteGut1.JMFR01007037 4354 5 - 19102 ----------GAGGC- i pteGut1.JMFR01007037 C 0 I 517 s apaSpi1.APJP01494108 6490 7 - 7680 ---------ATGTGTA i apaSpi1.APJP01494108 I 9 I 2 s pytBiv1.KE963723 1755 5 + 11496 --------CATGT--- i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15279 5 + 149140 --------CTTTG--- i thaSir1.NW_013660008v1 C 0 C 0 s petMar3.PIZI01000091v1 716168 12 + 1484368 ATCTGGCCCACC---- i petMar3.PIZI01000091v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-1023.000000 s galGal6.chrUn_NW_020110134v1 19810 6 + 23766 AATCCA s tauEry1.KL466384 46169 6 - 65150 TTAGCA i tauEry1.KL466384 C 0 C 0 s merNub1.JJRJ01073185 26811 4 + 83031 --AGTA i merNub1.JJRJ01073185 N 0 N 0 s apaSpi1.APJP01494108 6499 6 - 7680 TATCTA i apaSpi1.APJP01494108 I 2 I 12 s pytBiv1.KE963723 1760 3 + 11496 ---TCA i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15284 3 + 149140 ---TCA i thaSir1.NW_013660008v1 C 0 C 0 s petMar3.PIZI01000091v1 716180 6 + 1484368 ATTCCA i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-14346.000000 s galGal6.chrUn_NW_020110134v1 19816 29 + 23766 AGCAGC----------CTCCCCCGTTAcccaccacaacc--- s tauEry1.KL466384 46175 29 - 65150 TGCAAG----------CATGTCAGAGAGGCACTCAAGTG--- i tauEry1.KL466384 C 0 C 0 s apaSpi1.APJP01494108 6517 29 - 7680 GACTGC----------CTCACTTATTTTACACTTGTGTC--- i apaSpi1.APJP01494108 I 12 C 0 s pytBiv1.KE963723 1763 32 + 11496 TTCAGCTTA-------TCCTCCTAAGACATATCCTGAAA--- i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15287 39 + 149140 GCCAGATCAGGTGGGGGTCTTTGGTGACACATCCACACC--- i thaSir1.NW_013660008v1 C 0 C 0 s petMar3.PIZI01000091v1 716186 27 + 1484368 ---------------CCCTCGTGGGAAAACAGTCCTGCAAGG i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-294.000000 s galGal6.chrUn_NW_020110134v1 19845 2 + 23766 tc s tauEry1.KL466384 46204 2 - 65150 TG i tauEry1.KL466384 C 0 C 0 s opiHoa1.KK734465 2414529 1 + 7494848 T- i opiHoa1.KK734465 N 0 N 0 s apaSpi1.APJP01494108 6546 2 - 7680 TC i apaSpi1.APJP01494108 C 0 C 0 s pytBiv1.KE963723 1795 2 + 11496 TC i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15326 2 + 149140 TC i thaSir1.NW_013660008v1 C 0 C 0 s petMar3.PIZI01000091v1 716213 2 + 1484368 TC i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-7915.000000 s galGal6.chrUn_NW_020110134v1 19847 9 + 23766 ct------ctGGAGC--------- s tauEry1.KL466384 46206 15 - 65150 CTGAGTTCCTGAAGA--------- i tauEry1.KL466384 C 0 I 3 s apaSpi1.APJP01494108 6548 9 - 7680 CTAAGTAC------C--------- i apaSpi1.APJP01494108 C 0 C 0 s pytBiv1.KE963723 1797 7 + 11496 --------CCTGAAT--------- i pytBiv1.KE963723 C 0 I 2 s thaSir1.NW_013660008v1 15328 7 + 149140 --------TTCCAGA--------- i thaSir1.NW_013660008v1 C 0 I 2 s petMar3.PIZI01000091v1 716215 16 + 1484368 --------CTCCAGTCGTTGAATT i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=531.000000 s galGal6.chrUn_NW_020110134v1 19856 15 + 23766 TTTGGGG-----GATCTCCC s tauEry1.KL466384 46224 15 - 65150 TTTGGGG-----CATTTCTC i tauEry1.KL466384 I 3 C 0 s apaSpi1.APJP01494108 6557 20 - 7680 TATGTAAATTTCCATTTCCC i apaSpi1.APJP01494108 C 0 I 1 s pytBiv1.KE963723 1806 15 + 11496 TCTTTGT-----CGCCTTCC i pytBiv1.KE963723 I 2 I 2 s thaSir1.NW_013660008v1 15337 14 + 149140 -CTGGGA-----CACGTTGC i thaSir1.NW_013660008v1 I 2 C 0 s petMar3.PIZI01000091v1 716231 15 + 1484368 TTTGCAC-----AAAGTCCC i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-3132.000000 s galGal6.chrUn_NW_020110134v1 19871 4 + 23766 --CATA s tauEry1.KL466384 46239 4 - 65150 --TATA i tauEry1.KL466384 C 0 C 0 s allSin1.KE695990 3369918 4 - 3518557 --CACT i allSin1.KE695990 N 0 N 0 s apaSpi1.APJP01494108 6578 4 - 7680 --CAAA i apaSpi1.APJP01494108 I 1 I 6 s pytBiv1.KE963723 1823 4 + 11496 --TGGA i pytBiv1.KE963723 I 2 C 0 s thaSir1.NW_013660008v1 15351 4 + 149140 --TGGA i thaSir1.NW_013660008v1 C 0 C 0 s petMar3.PIZI01000091v1 716246 3 + 1484368 CCT--- i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-1341.000000 s galGal6.chrUn_NW_020110134v1 19875 16 + 23766 GCAGTGcctt-caggca s tauEry1.KL466384 46243 17 - 65150 CCAGTGCATTGtaggca i tauEry1.KL466384 C 0 C 0 s apaSpi1.APJP01494108 6588 16 - 7680 GCCATTAGTT-CAGGTC i apaSpi1.APJP01494108 I 6 I 35 s pytBiv1.KE963723 1827 12 + 11496 ----CCCATT-CTAGCC i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15355 12 + 149140 ----GCTGCT-CTGGCC i thaSir1.NW_013660008v1 C 0 I 4 s petMar3.PIZI01000091v1 716249 15 + 1484368 -CACCACTTT-CTGGTC i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-12582.000000 s galGal6.chrUn_NW_020110134v1 19891 50 + 23766 tttccttgcAACCCTGCAAGTGCTG-------------------------------ATTTTCTGGTCCCTCTCCCTCACAT s tauEry1.KL466384 46260 81 - 65150 ttttctttcttacataaAAGTGCTGGAGGTGACCCCACTTAAACCccattttgttgattttgtaGTCTCTTCCTATCACAC i tauEry1.KL466384 C 0 C 0 s pytBiv1.KE963723 1839 32 + 11496 ------TGTCAATATCC---AGCTG-------------------------------GAAATGTGG---------GGCCCAG i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15371 32 + 149140 ----TTTGAGTACATCCTGGAGCTG-------------------------------AACAT--------------CCACAG i thaSir1.NW_013660008v1 I 4 C 0 s petMar3.PIZI01000091v1 716264 46 + 1484368 ----CTCCAATAGACCCACGTTCTA-------------------------------TTTTCCACATCCCTTTTCCTCTCCT i petMar3.PIZI01000091v1 C 0 C 0 e apaSpi1.APJP01494108 6604 35 - 7680 I e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-1306.000000 s galGal6.chrUn_NW_020110134v1 19941 3 + 23766 CAC s tauEry1.KL466384 46341 3 - 65150 CAC i tauEry1.KL466384 C 0 C 0 s apaSpi1.APJP01494108 6639 2 - 7680 AA- i apaSpi1.APJP01494108 I 35 N 0 s pytBiv1.KE963723 1871 3 + 11496 GAC i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15403 3 + 149140 CAT i thaSir1.NW_013660008v1 C 0 C 0 s petMar3.PIZI01000091v1 716310 3 + 1484368 CGC i petMar3.PIZI01000091v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-18541.000000 s galGal6.chrUn_NW_020110134v1 19944 80 + 23766 CCCATCCCTGTGATCAAAAGCCCT------------------------------------------CACCATTCTTAGGTT----------AAAGCCTCCCTT-----GTGAAG------------CTGCCATCCTACT---------GATGAAAATA s tauEry1.KL466384 46344 123 - 65150 TCCAAGCCCTTAGTTTAGCACTCTTGTCTTCCACTACCTCACAGGACTTCTGTCTACTCCTTCCCACATCATTCTGAGTTC----------AAAGGACTCTTT-----ATGAAG-----------TCAGCCATCCTGTT---------GGGGAAAATA i tauEry1.KL466384 C 0 C 0 s pytBiv1.KE963723 1874 79 + 11496 TCCAGGTGTGGTCTCACTGATGCC------------------------------------------CAGCACTCTCG-TTT----------AAAGCCCTCCTG-ATCAGTGAGC------------CAGCCACCTCTCA-------------AATATG i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15406 103 + 149140 CCAGAGCACGGACCCCCAGAAGCT------------------------------------------GGGCTTCCTGGACAC----------GCGGCCCCACTACGTACGTGCGCGTGCGGGAATGGCACTCCCCCCTCa---ggaagggaggggtggg i thaSir1.NW_013660008v1 C 0 C 0 s petMar3.PIZI01000091v1 716313 104 + 1484368 CCCACCCCTGGGATCGCGAGCCCT-----GCCAC--------------------------------GACCATTTTGTGGTTCGTGAAGGGGAAGGCCCCACCC-----CCGCAC------------TTTCCACTTCTACTTTGGCagaggtgaaaata i petMar3.PIZI01000091v1 C 0 N 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-1123.000000 s galGal6.chrUn_NW_020110134v1 20024 73 + 23766 TCCTCACCTCCCTTTGG-----GAGGTGGGTCCCATCCCTTCCAA-----GCAGACACCAATCTGCAAATA-GGTCCTGCAGAC s tauEry1.KL466384 46467 74 - 65150 GCTTTGCCTCTCTTAGT-----GAGGTGGCTCTCATCTCTCCTGA-----GCAGACGCTGATCTGCAAACAGGGTTCTGTGGTC i tauEry1.KL466384 C 0 C 0 s pytBiv1.KE963723 1953 58 + 11496 TACTTTCTTCCCTTTGT-----GAGATGAATCCCACCTCTGAACA-----GCAGGCTTTCCTCTCTGA---------------- i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15509 58 + 149140 tgcCCCCCATTCTTGGTGGGGAGGGAAGAATCTGAGGGCTGAAAAGGCGTGGGGGCTT-------------------------- i thaSir1.NW_013660008v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=29.000000 s galGal6.chrUn_NW_020110134v1 20097 1 + 23766 A s tauEry1.KL466384 46541 1 - 65150 A i tauEry1.KL466384 C 0 C 0 s pelSin1.JH210662 3175606 1 + 5131761 g i pelSin1.JH210662 N 0 N 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e pytBiv1.KE963723 2011 0 + 11496 C e thaSir1.NW_013660008v1 15567 0 + 149140 C e melGal5.chr24 118646 3332 - 4088881 I a score=-80.000000 s galGal6.chrUn_NW_020110134v1 20098 47 + 23766 CAGAACCCAAGgccctgcca-ccagcaccagtcCTGCAGCCAAGGACT s tauEry1.KL466384 46542 47 - 65150 TAGAGCACAAACCTTTGCGG-ACAGCACCAGTTCTGTAGCCAATTATT i tauEry1.KL466384 C 0 C 0 s pytBiv1.KE963723 2011 46 + 11496 -AAAATCTAAACCTCTCTTG-TTTGCACCAATCTTGCAATGAAAAGTT i pytBiv1.KE963723 C 0 I 63 s thaSir1.NW_013660008v1 15567 36 + 149140 --ATGACCAAACAGCCCCTGAGTTGC----------TGGAGGGGGGCT i thaSir1.NW_013660008v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-1784.000000 s galGal6.chrUn_NW_020110134v1 20145 67 + 23766 GGCACGCACCACCAGTGCC------CTCCTTTCACAcctgtcccac------------------agcaccacctgGGCCCCCACACCCTGG s tauEry1.KL466384 46589 88 - 65150 GACTTGTCCTGTTATTGTC---CTTCTCCTTGCATCCTTGTCCCTCACTAGCAGAATTAAGGAGAACACCATCTGGGGCCCCATGCATTTG i tauEry1.KL466384 C 0 C 0 s thaSir1.NW_013660008v1 15603 67 + 149140 GGCAGG-------AATGCCGGGACGCTCGCCTGCCTCTGGTCCGGC-----CAGGAAGGAGG------------GGGCTTCTGTGTCTGTG i thaSir1.NW_013660008v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e pytBiv1.KE963723 2057 63 + 11496 I e melGal5.chr24 118646 3332 - 4088881 I a score=868.000000 s galGal6.chrUn_NW_020110134v1 20212 15 + 23766 ACTACCAGcctgaga s tauEry1.KL466384 46677 15 - 65150 CTTACTGGCCCCAGA i tauEry1.KL466384 C 0 C 0 s pytBiv1.KE963723 2120 15 + 11496 ATTACCACCATGAGA i pytBiv1.KE963723 I 63 C 0 s thaSir1.NW_013660008v1 15670 4 + 149140 -----------GAGC i thaSir1.NW_013660008v1 C 0 C 0 e pteGut1.JMFR01007037 4359 517 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-3744.000000 s galGal6.chrUn_NW_020110134v1 20227 13 + 23766 ------gct----ctgcagttgc s tauEry1.KL466384 46692 12 - 65150 ------CCT-----TGTAGTCAC i tauEry1.KL466384 C 0 C 0 s pteGut1.JMFR01007037 4876 13 - 19102 ------ACT----GTACAGGTTT i pteGut1.JMFR01007037 I 517 I 1 s pytBiv1.KE963723 2135 19 + 11496 TCTTTCACC----ATCCTCTTTC i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15674 23 + 149140 TCAGGGGCCCCTAATCCCGCTTC i thaSir1.NW_013660008v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=755.000000 s galGal6.chrUn_NW_020110134v1 20240 1 + 23766 t s tauEry1.KL466384 46704 1 - 65150 T i tauEry1.KL466384 C 0 C 0 s phoRub1.JJRE01105766 9544 1 + 28169 T i phoRub1.JJRE01105766 N 0 I 500 s pteGut1.JMFR01007037 4890 1 - 19102 C i pteGut1.JMFR01007037 I 1 I 2 s pytBiv1.KE963723 2154 1 + 11496 T i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15697 1 + 149140 T i thaSir1.NW_013660008v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-4473.000000 s galGal6.chrUn_NW_020110134v1 20241 4 + 23766 ----tttg s tauEry1.KL466384 46705 2 - 65150 ----TT-- i tauEry1.KL466384 C 0 C 0 s pteGut1.JMFR01007037 4893 2 - 19102 ----TG-- i pteGut1.JMFR01007037 I 2 I 282 s pytBiv1.KE963723 2155 4 + 11496 CTTG---- i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15698 2 + 149140 CT------ i thaSir1.NW_013660008v1 C 0 C 0 e phoRub1.JJRE01105766 9545 500 + 28169 I e melGal5.chr24 118646 3332 - 4088881 I a score=-292.000000 s galGal6.chrUn_NW_020110134v1 20245 25 + 23766 atGCAGTATTACCTGTGCCCACCTT s tauEry1.KL466384 46707 22 - 65150 ---CAGTACTGTCCAGGTTTACCCT i tauEry1.KL466384 C 0 N 0 s pytBiv1.KE963723 2159 19 + 11496 ------GATCATCTgcaccttcctt i pytBiv1.KE963723 C 0 C 0 s thaSir1.NW_013660008v1 15700 9 + 149140 ----------------GCTCTCCTC i thaSir1.NW_013660008v1 C 0 C 0 e phoRub1.JJRE01105766 9545 500 + 28169 I e pteGut1.JMFR01007037 4895 282 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=212.000000 s galGal6.chrUn_NW_020110134v1 20270 4 + 23766 TCTT s pytBiv1.KE963723 2178 4 + 11496 tcct i pytBiv1.KE963723 C 0 N 0 s thaSir1.NW_013660008v1 15709 4 + 149140 accc i thaSir1.NW_013660008v1 C 0 C 0 e phoRub1.JJRE01105766 9545 500 + 28169 I e pteGut1.JMFR01007037 4895 282 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=138.000000 s galGal6.chrUn_NW_020110134v1 20274 4 + 23766 CCTG s thaSir1.NW_013660008v1 15713 4 + 149140 ccca i thaSir1.NW_013660008v1 C 0 C 0 e phoRub1.JJRE01105766 9545 500 + 28169 I e pteGut1.JMFR01007037 4895 282 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-3514.000000 s galGal6.chrUn_NW_020110134v1 20278 77 + 23766 GTCGCCTCGCACAGTGAACCACACGAGGTGTAAGGTTGGGTGGACTGC-ATTCATCACTTGGAGGCATC--TCAg----cctcc- s carCri1.JJRQ01077013 2110 73 + 2425 GGAAACTGGCATAT----CTGCAGGGAGTGGGGTCAcgggagcagagc-caggacagctTGTCGGCTTC--CCAG----TCCCC- i carCri1.JJRQ01077013 N 0 N 0 s thaSir1.NW_013660008v1 15717 76 + 149140 -----ctcacccac----ccacagATCACCCGGCGGTACGCAGAGTTCTCCTCGGCCATCGTCAGCATCAACCAGACCTTCTCCC i thaSir1.NW_013660008v1 C 0 C 0 e phoRub1.JJRE01105766 9545 500 + 28169 I e pteGut1.JMFR01007037 4895 282 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-296.000000 s galGal6.chrUn_NW_020110134v1 20355 20 + 23766 tcaccagcactgaggtc--GGT s thaSir1.NW_013660008v1 15793 22 + 149140 ACGAGAGGACTTTGGCCTTGTT i thaSir1.NW_013660008v1 C 0 C 0 e phoRub1.JJRE01105766 9545 500 + 28169 I e pteGut1.JMFR01007037 4895 282 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=812.000000 s galGal6.chrUn_NW_020110134v1 20375 6 + 23766 GGAGCT s phoRub1.JJRE01105766 10045 6 + 28169 GAAGCT i phoRub1.JJRE01105766 I 500 I 7 s thaSir1.NW_013660008v1 15815 6 + 149140 GGGGCA i thaSir1.NW_013660008v1 C 0 C 0 e pteGut1.JMFR01007037 4895 282 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=10.000000 s galGal6.chrUn_NW_020110134v1 20381 7 + 23766 GCGGTGG s thaSir1.NW_013660008v1 15821 7 + 149140 GCTTCAG i thaSir1.NW_013660008v1 C 0 C 0 e phoRub1.JJRE01105766 10051 7 + 28169 I e pteGut1.JMFR01007037 4895 282 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=91.000000 s galGal6.chrUn_NW_020110134v1 20388 1 + 23766 A s phoRub1.JJRE01105766 10058 1 + 28169 A i phoRub1.JJRE01105766 I 7 I 6 e pteGut1.JMFR01007037 4895 282 - 19102 I e thaSir1.NW_013660008v1 15828 0 + 149140 C e melGal5.chr24 118646 3332 - 4088881 I a score=201.000000 s galGal6.chrUn_NW_020110134v1 20389 6 + 23766 GCTGTG s thaSir1.NW_013660008v1 15828 3 + 149140 ---GTG i thaSir1.NW_013660008v1 C 0 C 0 e phoRub1.JJRE01105766 10059 6 + 28169 I e pteGut1.JMFR01007037 4895 282 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=1775.000000 s galGal6.chrUn_NW_020110134v1 20395 7 + 23766 AGCCCTT s phoRub1.JJRE01105766 10065 7 + 28169 AGCCCTT i phoRub1.JJRE01105766 I 6 C 0 s thaSir1.NW_013660008v1 15831 7 + 149140 GGCCCTT i thaSir1.NW_013660008v1 C 0 C 0 e pteGut1.JMFR01007037 4895 282 - 19102 I e melGal5.chr24 118646 3332 - 4088881 I a score=-265.000000 s galGal6.chrUn_NW_020110134v1 20402 1 + 23766 C s phoRub1.JJRE01105766 10072 1 + 28169 A i phoRub1.JJRE01105766 C 0 N 0 s pteGut1.JMFR01007037 5177 1 - 19102 A i pteGut1.JMFR01007037 I 282 N 0 s thaSir1.NW_013660008v1 15838 1 + 149140 C i thaSir1.NW_013660008v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-137.000000 s galGal6.chrUn_NW_020110134v1 20403 1 + 23766 T s apaVit1.KL389946 9508 1 - 39536 G i apaVit1.KL389946 N 0 I 49 s thaSir1.NW_013660008v1 15839 1 + 149140 T i thaSir1.NW_013660008v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=224.000000 s galGal6.chrUn_NW_020110134v1 20404 42 + 23766 GTGGGACAGGAGCGTCCTCTGCTGCCAGGATTCTCCAGCTTC s thaSir1.NW_013660008v1 15840 42 + 149140 GCAGGACAGGGGAGACCCTCCTTGCAAGGGGGGCAGCCTGTC i thaSir1.NW_013660008v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I e apaVit1.KL389946 9509 49 - 39536 I a score=-155.000000 s galGal6.chrUn_NW_020110134v1 20446 1 + 23766 A s apaVit1.KL389946 9558 1 - 39536 T i apaVit1.KL389946 I 49 N 0 s thaSir1.NW_013660008v1 15882 1 + 149140 A i thaSir1.NW_013660008v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=1159.000000 s galGal6.chrUn_NW_020110134v1 20447 43 + 23766 GTCCGTCACCAGATGCAAGGCTATGCCACGGGGCTGCAGCgag s thaSir1.NW_013660008v1 15883 43 + 149140 GTGCTACTGAAGACGCAAAGATGGGCCAGAGGGCTGCCTCAAG i thaSir1.NW_013660008v1 C 0 N 0 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 20490 43 + 23766 cctgcagctcagaacagccccgagcactgcagagacaagcagg e melGal5.chr24 118646 3332 - 4088881 I a score=482.000000 s galGal6.chrUn_NW_020110134v1 20533 5 + 23766 CAGTC s colStr1.KK538327 2496 5 + 3755 CAGTC i colStr1.KK538327 N 0 I 58 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 20538 64 + 23766 TGTGATGCCTTCAGAGCGTTATTCCCAACAGTTACAAAcacctgcaaaagcaaacaagaaccaC e colStr1.KK538327 2501 58 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=91.000000 s galGal6.chrUn_NW_020110134v1 20602 1 + 23766 A s colStr1.KK538327 2559 1 + 3755 A i colStr1.KK538327 I 58 I 11 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 20603 10 + 23766 CTGTGCAGTG e colStr1.KK538327 2560 11 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=2.000000 s galGal6.chrUn_NW_020110134v1 20613 7 + 23766 ATAAGAA s colStr1.KK538327 2571 7 + 3755 AAACCAA i colStr1.KK538327 I 11 I 214 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 20620 220 + 23766 CGCACAGCTTAGCAGACAGGAGCGTAGGGCTTAGGAGAAAGCTCTATTTCAGAGGTTGGTAGGGAATTTCACATCACACAAAGGCACCAACCAAAAGCAGAGTTTCTAACAGCAGTGTTATCCAGGAGTCCAGCAGACGGTGCTGGCACATTTGGTATGTGACCCCATAACAAGGCAGCTTAGGATGAGGCATCAGGCAGTGCTGACGACACGCTTTATG e colStr1.KK538327 2578 214 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=100.000000 s galGal6.chrUn_NW_020110134v1 20840 1 + 23766 G s colStr1.KK538327 2792 1 + 3755 G i colStr1.KK538327 I 214 I 187 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 20841 251 + 23766 ACAGGTCATGCTTTAATAGGTGCCGTTCCAATGGCAGCAATTAATTGAGAGCAAAGGCTTGACACACAAACCTGATGATTTACACTCCCACCAGTCAAGGCAGACAGACCAAGACTATGAGGCTGACCTGTAACCAGGCTTGGGacgcagccttgagaaagggggaatgctgacagcGAATGGGAGCTGACTGACTAGAAGGGctacaaatattcttgggaacaagttggctgggctggttagcagggctt e colStr1.KK538327 2793 187 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=4850.000000 s galGal6.chrUn_NW_020110134v1 21092 71 + 23766 taaactagagatggtgggggaaggggatgtACTGGGTGACAGGGAAGACCACAGGAATGCTTTCACCTtgg s pteGut1.JMFR01045851 27995 71 - 29222 TAAACTCGATACGATGGGGGAAGGGGATGTACTGGGCAACAGAGAAGAGCAAGGGAATGCTGTCGCCTtgg i pteGut1.JMFR01045851 N 0 N 0 e colStr1.KK538327 2793 187 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 21163 192 + 23766 gaggtggtaagggaaaaGCCCAGTCTTGCCCTGGAGGTATTAGGGagggtctggtggttggcgaccctgcacataacagggggttgaaactcgatgatcgttatggtccttttcaacccaggccattctatgattctatggtagcGCAGCTGAAGTTCCTTCTGCAGTCACTGGGGCAGCTTTCCCACCTCC e colStr1.KK538327 2793 187 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=277.000000 s galGal6.chrUn_NW_020110134v1 21355 8 + 23766 AGACCTAC s colStr1.KK538327 2980 8 + 3755 AGATGTAT i colStr1.KK538327 I 187 I 91 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 21363 216 + 23766 AGGCAACATACACACAAAGTGCAGCACGGCTGTTTGTGCTCCACACTCAGAGAGCAAGTTGTCAAGTTAGAGCTTGTACAAGGAccatggaggtgtggcactgatggacatggttagtgggcatggtgggaatgggttggggttggatttggtgaccctagaatcatttaggttggaaaagaccactatgacATCAACACTGATTGTACTTCAGAT e colStr1.KK538327 2988 91 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=-156.000000 s galGal6.chrUn_NW_020110134v1 21579 2 + 23766 GG s colStr1.KK538327 3079 2 + 3755 CA i colStr1.KK538327 I 91 I 76 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 21581 71 + 23766 GTTCTTTTGGAGGGGTTTCATTATCTTCCAAAAGCTGAAGCCAGGCTGCATTCTCTCCATATAATGACAAA e colStr1.KK538327 3081 76 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=100.000000 s galGal6.chrUn_NW_020110134v1 21652 1 + 23766 G s colStr1.KK538327 3157 1 + 3755 G i colStr1.KK538327 I 76 I 54 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 21653 78 + 23766 TTAATTCCTCCCTCTGCAAATTTCTACATTCTGCATCcaaatttgcttcatttgacAGGATTTACTggtaaatgcaga e colStr1.KK538327 3158 54 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=-332.000000 s galGal6.chrUn_NW_020110134v1 21731 5 + 23766 ag--aga s colStr1.KK538327 3212 7 + 3755 TGGCAAA i colStr1.KK538327 I 54 I 33 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 21736 31 + 23766 aggacaGCTTGCAAGGAAATAACAAAGCCAA e colStr1.KK538327 3219 33 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=-145.000000 s galGal6.chrUn_NW_020110134v1 21767 2 + 23766 AA s colStr1.KK538327 3252 2 + 3755 GC i colStr1.KK538327 I 33 I 48 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 21769 40 + 23766 TAGATTTGGTTAAAGCTAGTaaaacaaggcttttttttac e colStr1.KK538327 3254 48 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=91.000000 s galGal6.chrUn_NW_020110134v1 21809 1 + 23766 T s colStr1.KK538327 3302 1 + 3755 T i colStr1.KK538327 I 48 I 85 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 21810 59 + 23766 AGGCTAAAACGGAACTGCTATTACCCAACCAGAGaattaattaatcaaaatcACTACTC e colStr1.KK538327 3303 85 + 3755 I e melGal5.chr24 118646 3332 - 4088881 I a score=-246.000000 s galGal6.chrUn_NW_020110134v1 21869 2 + 23766 AT s colStr1.KK538327 3388 2 + 3755 TA i colStr1.KK538327 I 85 N 0 e melGal5.chr24 118646 3332 - 4088881 I a score=0.000000 s galGal6.chrUn_NW_020110134v1 21871 83 + 23766 AGCAATTaatgagagaaacaaacaaacaaacaaacaaacaaaaacctgagagAAATCCTTATGATCCCCTCCTTCCCATAACG e melGal5.chr24 118646 3332 - 4088881 I a score=84.000000 s galGal6.chrUn_NW_020110134v1 21954 15 + 23766 CGGGACATACCCCAG s mayZeb1.AGTA02068962 1520 13 - 6537 CAGAACGTCTCCC-- i mayZeb1.AGTA02068962 N 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=191.000000 s galGal6.chrUn_NW_020110134v1 21969 2 + 23766 GA s tetNig2.chr17 5913991 2 - 12136232 GA i tetNig2.chr17 N 0 I 1 e mayZeb1.AGTA02068962 1533 0 - 6537 C e melGal5.chr24 118646 3332 - 4088881 I a score=273.000000 s galGal6.chrUn_NW_020110134v1 21971 1 + 23766 A s xenLae2.chr3S 90383350 1 - 120483113 A i xenLae2.chr3S N 0 C 0 s gasAcu1.chrVI 7069402 1 - 17083675 A i gasAcu1.chrVI N 0 C 0 e tetNig2.chr17 5913993 1 - 12136232 I e mayZeb1.AGTA02068962 1533 0 - 6537 C e melGal5.chr24 118646 3332 - 4088881 I a score=1763.000000 s galGal6.chrUn_NW_020110134v1 21972 2 + 23766 TC s xenLae2.chr3S 90383351 2 - 120483113 TT i xenLae2.chr3S C 0 C 0 s tetNig2.chr17 5913994 2 - 12136232 TC i tetNig2.chr17 I 1 C 0 s oreNil3.chrLG13 8554521 2 + 32337344 TT i oreNil3.chrLG13 N 0 C 0 s mayZeb1.AGTA02068962 1533 2 - 6537 TT i mayZeb1.AGTA02068962 C 0 C 0 s gasAcu1.chrVI 7069403 2 - 17083675 TT i gasAcu1.chrVI C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=283.000000 s galGal6.chrUn_NW_020110134v1 21974 2 + 23766 CT s xenLae2.chr3S 90383353 2 - 120483113 AC i xenLae2.chr3S C 0 C 0 s tetNig2.chr17 5913996 2 - 12136232 CT i tetNig2.chr17 C 0 C 0 s oreNil3.chrLG13 8554523 2 + 32337344 TT i oreNil3.chrLG13 C 0 C 0 s mayZeb1.AGTA02068962 1535 2 - 6537 TT i mayZeb1.AGTA02068962 C 0 C 0 s gasAcu1.chrVI 7069405 2 - 17083675 TC i gasAcu1.chrVI C 0 C 0 s danRer11.chr13 35860096 2 - 52186027 CT i danRer11.chr13 N 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=129433.000000 s galGal6.chrUn_NW_020110134v1 21976 63 + 23766 TCAATCCTCGCTGCcacagagcttcagcagaacGTTCCTGTAGTCTCCTGAGCAGTCTCCCTG s xenTro9.chr3 25437897 63 - 137218701 TTAGTCTTCCCCTCCACAAAGTTTCAAGAGCACCTTCCTATAATCTCCAGAGCAGTCACCCTG i xenTro9.chr3 N 0 C 0 s xenLae2.chr3S 90383355 63 - 120483113 TTAGTCATCCCCTCCGCAAAGTTTCAAAAGCACCTTCTTATAATCTCCAGAGCAGTCACCCTG i xenLae2.chr3S C 0 C 0 s nanPar1.KN906005v1 609001 63 + 2048838 TCAGTCTTCTCCTCCACAAAGCTTCAGAAGCAACTTCCTGTAATCTCCAGAACAGTCTCCCTG i nanPar1.KN906005v1 N 0 C 0 s tetNig2.chr17 5913998 63 - 12136232 TCAGTCACTGCCTCCACACAGCTTGAGCAGGAGCTTCTTGTAGTCCCCTGAGGTGTCTCCCTA i tetNig2.chr17 C 0 C 0 s oreNil3.chrLG13 8554525 63 + 32337344 TCAGTCACTGCCCCCGCAGAGCTTGAGTAGGAGTTTCTTGTAGTCTCCTGATGTGTCTCCCTG i oreNil3.chrLG13 C 0 I 8 s mayZeb1.AGTA02068962 1537 63 - 6537 TCAGTCACTGCCCCCGCAGAGCTTGAGTAGGAGTTTCTTGTAGTCTCCTGATGTGTCTCCCTG i mayZeb1.AGTA02068962 C 0 I 20 s gasAcu1.chrVI 7069407 63 - 17083675 TCAGTCACTGCCCCCGCAGAACTTCAGGAGGAGTTTCTTGTAGTCTCCTGATGTGTCTCCCTG i gasAcu1.chrVI C 0 C 0 s danRer11.chr13 35860098 63 - 52186027 TTAATCACTTCCTCCGCAGAGTTTCAGCAGCAACTTCTTATAATCCCCTGAAGTGTCTCCCTG i danRer11.chr13 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=366.000000 s galGal6.chrUn_NW_020110134v1 22039 5 + 23766 GGAAT s xenTro9.chr3 25437960 5 - 137218701 CAGAA i xenTro9.chr3 C 0 C 0 s xenLae2.chr3S 90383418 5 - 120483113 TGGAa i xenLae2.chr3S C 0 C 0 s nanPar1.KN906005v1 609064 5 + 2048838 GAAAT i nanPar1.KN906005v1 C 0 C 0 s tetNig2.chr17 5914061 5 - 12136232 TGGAT i tetNig2.chr17 C 0 C 0 s gasAcu1.chrVI 7069470 5 - 17083675 TCAAC i gasAcu1.chrVI C 0 C 0 s danRer11.chr13 35860161 5 - 52186027 CAAAT i danRer11.chr13 C 0 N 0 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I a score=4035.000000 s galGal6.chrUn_NW_020110134v1 22044 5 + 23766 ACAAA s xenTro9.chr3 25437965 5 - 137218701 ACAAA i xenTro9.chr3 C 0 N 0 s xenLae2.chr3S 90383423 5 - 120483113 acaaa i xenLae2.chr3S C 0 I 2 s nanPar1.KN906005v1 609069 5 + 2048838 GTCAA i nanPar1.KN906005v1 C 0 C 0 s tetNig2.chr17 5914066 5 - 12136232 ATAAA i tetNig2.chr17 C 0 N 0 s gasAcu1.chrVI 7069475 5 - 17083675 AAAAC i gasAcu1.chrVI C 0 I 3 s danRer11.chr14 3329677 5 - 52660232 ataaa i danRer11.chr14 N 0 C 0 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I a score=172.000000 s galGal6.chrUn_NW_020110134v1 22049 2 + 23766 Gg s nanPar1.KN906005v1 609074 2 + 2048838 GG i nanPar1.KN906005v1 C 0 I 2470 s gasAcu1.chrVI 7069483 2 - 17083675 TG i gasAcu1.chrVI I 3 C 0 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e danRer11.chr14 3329682 0 - 52660232 C e xenLae2.chr3S 90383428 2 - 120483113 I a score=-3772.000000 s galGal6.chrUn_NW_020110134v1 22051 11 + 23766 ------tgaataaatg--a s xenLae2.chr3S 90383430 13 - 120483113 ------acaatatatatta i xenLae2.chr3S I 2 C 0 s gasAcu1.chrVI 7069485 13 - 17083675 TGTCAGCAAATGA------ i gasAcu1.chrVI C 0 I 223 s danRer11.chr14 3329682 9 - 52660232 ----atagaatga------ i danRer11.chr14 C 0 I 4 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e nanPar1.KN906005v1 609076 2470 + 2048838 I a score=581.000000 s galGal6.chrUn_NW_020110134v1 22062 22 + 23766 gaagaaagaaggg-aaaagtggg s xenLae2.chr3S 90383443 22 - 120483113 caacAAGCAAGCT-GGAGATGGG i xenLae2.chr3S C 0 I 333 s danRer11.chr14 3329695 22 - 52660232 -aagaaataaatgcacaaatgaa i danRer11.chr14 I 4 C 0 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e gasAcu1.chrVI 7069498 223 - 17083675 I e nanPar1.KN906005v1 609076 2470 + 2048838 I a score=-133.000000 s galGal6.chrUn_NW_020110134v1 22084 40 + 23766 ggacagagagaggagcagggacaataaagaggagagcaga s danRer11.chr14 3329717 31 - 52660232 aaataaa---------attaataattaaaaaacgaataaa i danRer11.chr14 C 0 C 0 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e gasAcu1.chrVI 7069498 223 - 17083675 I e xenLae2.chr3S 90383465 333 - 120483113 I e nanPar1.KN906005v1 609076 2470 + 2048838 I a score=-899.000000 s galGal6.chrUn_NW_020110134v1 22124 70 + 23766 gaaggagaggagagaaaagatcgagcagaacaaagaaaa----------------aagggaagagaggagcttGTAAcggggaaga s danRer11.chr14 3329748 86 - 52660232 gtaaaatagaagagaaaaattcataaaagaaaaataaaataaattaaataaattaaaatgaatgaatgaaataaataaatgaatga i danRer11.chr14 C 0 C 0 s petMar3.PIZI01000003v1 15971608 69 - 25736822 GATGAAGTGCGAGGAAAAGCGCGGAGTGAGAGGTGAAAA----------------GGAGAAGTGAGAGGTATGGAGAGGTGGAAA- i petMar3.PIZI01000003v1 N 0 C 0 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e gasAcu1.chrVI 7069498 223 - 17083675 I e xenLae2.chr3S 90383465 333 - 120483113 I e nanPar1.KN906005v1 609076 2470 + 2048838 I a score=-7245.000000 s galGal6.chrUn_NW_020110134v1 22194 189 + 23766 acagaagagtgaTGAATgagaggggggaagaaaga-------gggcAAAACGGAAGAGAGGATACGCGTAAGGAGAGCTGATCTAAAAAtggca----agggaaagaaagagagggtgaggagaa------cagagggaacagcagaagagggaaggg----cagatgcaggaagaagggaaggaatggtgcagag--aaaagggagaagag s mm10.chr1 185119858 173 + 195471971 aaagaaggaagaggaaaaagaggaggaaaggagga-------ggaggaagagggggaggagaaggaggtggagggag-------aggaagagga----ggaggaagagaaggaggaagaggagga-----gaagaaagaagaggaagagaaggaggag----aagaagaaagaggaggaggaggaa------------gaggaggagaagaa i mm10.chr1 N 0 C 0 s danRer11.chr14 3329834 195 - 52660232 ataaatgaaaaataaaataaatgtataaataaata-------aaatgaataaaataaaatagaatgaatgaatgaaataaatgaataaatacaaatttaaataaaataaaatagaatgaaataat-----aaataaataaatgaaaaataaaacaaaa----aataaacaaaataataaaataaaataaaataaaa-taaaataaaataaaa i danRer11.chr14 C 0 C 0 s petMar3.PIZI01000003v1 15971677 208 - 25736822 GCAGTGGGTTGGAAGATGAGGGTTGGTAAGCTGGAGTCTTTGGAGATGAGAGTTTCAGAAGCTTTGAGAATACAGACTGGGTTGGGAAAGGGAG----GGACAcgttggcagagagagagatatgtttGGATAGACATGCAGGGAGATGGAAGCTGGATTGTCATAAGATATATTGAGAGATAGATTGGGTTGGAAATGTAAGGAAGGAGAG i petMar3.PIZI01000003v1 C 0 I 72 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e gasAcu1.chrVI 7069498 223 - 17083675 I e xenLae2.chr3S 90383465 333 - 120483113 I e nanPar1.KN906005v1 609076 2470 + 2048838 I a score=486.000000 s galGal6.chrUn_NW_020110134v1 22383 17 + 23766 tgcagaaaaacagaaag s mm10.chr1 185120031 17 + 195471971 agaagagaaagagaagg i mm10.chr1 C 0 C 0 s danRer11.chr14 3330029 15 - 52660232 taaaataaaataaaa-- i danRer11.chr14 C 0 C 0 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e gasAcu1.chrVI 7069498 223 - 17083675 I e xenLae2.chr3S 90383465 333 - 120483113 I e petMar3.PIZI01000003v1 15971885 72 - 25736822 I e nanPar1.KN906005v1 609076 2470 + 2048838 I a score=-2764.000000 s galGal6.chrUn_NW_020110134v1 22400 38 + 23766 tagaagagaggaagagagaa------ggccagagCAAACTGAct s mm10.chr1 185120048 34 + 195471971 aggagaagaagaa-agagga------gga-ggaggaagagga-- i mm10.chr1 C 0 C 0 s oryLat2.chr15 20657980 40 + 30000224 taaagaagaagaaaaaagaaacctttaGCTGAAACAcaag---- i oryLat2.chr15 N 0 C 0 s danRer11.chr14 3330044 36 - 52660232 taaaataaaataaaataaaa----ttaaattaaattaaat---- i danRer11.chr14 C 0 C 0 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e gasAcu1.chrVI 7069498 223 - 17083675 I e xenLae2.chr3S 90383465 333 - 120483113 I e petMar3.PIZI01000003v1 15971885 72 - 25736822 I e nanPar1.KN906005v1 609076 2470 + 2048838 I a score=-168.000000 s galGal6.chrUn_NW_020110134v1 22438 4 + 23766 tact s mm10.chr1 185120082 1 + 195471971 ---g i mm10.chr1 C 0 C 0 s nanPar1.KN906268v1 57002 4 + 1239783 TACT i nanPar1.KN906268v1 n 2470 C 0 s oryLat2.chr15 20658020 1 + 30000224 ---t i oryLat2.chr15 C 0 C 0 s danRer11.chr14 3330080 1 - 52660232 ---t i danRer11.chr14 C 0 C 0 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e gasAcu1.chrVI 7069498 223 - 17083675 I e xenLae2.chr3S 90383465 333 - 120483113 I e petMar3.PIZI01000003v1 15971885 72 - 25736822 I a score=443.000000 s galGal6.chrUn_NW_020110134v1 22442 1 + 23766 g s mm10.chr1 185120083 1 + 195471971 g i mm10.chr1 C 0 C 0 s nanPar1.KN906268v1 57006 1 + 1239783 G i nanPar1.KN906268v1 C 0 C 0 s oryLat2.chr15 20658021 1 + 30000224 a i oryLat2.chr15 C 0 I 2 s danRer11.chr14 3330081 1 - 52660232 a i danRer11.chr14 C 0 I 3 s petMar3.PIZI01000003v1 15971957 1 - 25736822 g i petMar3.PIZI01000003v1 I 72 C 0 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e gasAcu1.chrVI 7069498 223 - 17083675 I e xenLae2.chr3S 90383465 333 - 120483113 I a score=1600.000000 s galGal6.chrUn_NW_020110134v1 22443 2 + 23766 ag s mm10.chr1 185120084 2 + 195471971 GG i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90383798 2 - 120483113 ag i xenLae2.chr3S I 333 C 0 s nanPar1.KN906268v1 57007 2 + 1239783 Ag i nanPar1.KN906268v1 C 0 C 0 s danRer11.chr14 3330085 2 - 52660232 aa i danRer11.chr14 I 3 I 28 s petMar3.PIZI01000003v1 15971958 2 - 25736822 ag i petMar3.PIZI01000003v1 C 0 C 0 e mayZeb1.AGTA02068962 1600 20 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e oryLat2.chr15 20658022 2 + 30000224 I e gasAcu1.chrVI 7069498 223 - 17083675 I a score=-6162.000000 s galGal6.chrUn_NW_020110134v1 22445 4 + 23766 --aaag s mm10.chr1 185120086 4 + 195471971 --GAAG i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90383800 4 - 120483113 --aatt i xenLae2.chr3S C 0 C 0 s nanPar1.KN906268v1 57009 4 + 1239783 --gagt i nanPar1.KN906268v1 C 0 C 0 s mayZeb1.JH720567 1138330 3 - 3270134 --AAA- i mayZeb1.JH720567 n 20 I 2 s oryLat2.chr15 20658024 3 + 30000224 --aaa- i oryLat2.chr15 I 2 I 4 s danRer11.chr14 3330115 3 - 52660232 --aaa- i danRer11.chr14 I 28 I 7 s petMar3.PIZI01000003v1 15971960 4 - 25736822 acag-- i petMar3.PIZI01000003v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554588 8 + 32337344 I e gasAcu1.chrVI 7069498 223 - 17083675 I a score=-53306.000000 s galGal6.chrUn_NW_020110134v1 22449 28 + 23766 gaaaaa-------aaaaggaa---------tat-------------gaa-------------------taa--ttttt s mm10.chr1 185120090 28 + 195471971 GAGAGA-------AAGTTGCT---------CAC-------------AAC-------------------CAA--GCCTT i mm10.chr1 C 0 I 14 s xenLae2.chr3S 90383804 43 - 120483113 gaatat-------aaaaaaaa---------tctgtttgctcttttgaga-------------------aatggatttc i xenLae2.chr3S C 0 I 23 s nanPar1.KN906268v1 57013 28 + 1239783 aaaaag-------aataaaaa---------tgt-------------aaa-------------------aat--atttt i nanPar1.KN906268v1 C 0 I 14 s oreNil3.chrLG8 17502727 26 - 30802437 GGATAT-------AAGGTCAT----------AT-------------AAC-------------------ATT--GTTT- i oreNil3.chrLG8 n 8 C 0 s mayZeb1.JH720567 1138335 31 - 3270134 CAATAT-------AAGGTCATA-----TAACAT-------------AAC-------------------ATT--GTTT- i mayZeb1.JH720567 I 2 C 0 s oryLat2.chr15 20658031 43 + 30000224 taatgtGCTGCTGGAGGGCAT------TTGTAT-------------AACTTCAT-------------AAAT--GTTG- i oryLat2.chr15 I 4 C 0 s danRer11.chr14 3330125 64 - 52660232 aaacaa-------aaGATGAAAGA--TTTGCATGCCAGGACTCA--AACTCCGGACGCCAAAGCACAATAT--ATGT- i danRer11.chr14 I 7 C 0 s petMar3.PIZI01000003v1 15971964 41 - 25736822 agacac-------aagggaAACAACTCTTACAC-------------AGCTTGAT--------------AGT--CTCT- i petMar3.PIZI01000003v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I e gasAcu1.chrVI 7069498 223 - 17083675 I a score=-110867.000000 s galGal6.chrUn_NW_020110134v1 22477 58 + 23766 ----------aagttcTA---CTGAAT-----------CAGAATTCTTCTTAAGACACAGAATTCTTTTGCAGTGCTTG---------------TAT s pytBiv1.KE954334 63633 31 + 287271 ----------AAGCTTGA----CCAAT-----------TA-----------AATGC-----------------AGCTTCCG-------------TAT i pytBiv1.KE954334 N 0 C 0 s thaSir1.NW_013658704v1 449547 42 + 513332 ----------AAGTTTAA---CCCAAT-----------CAT--CTCTCTCTAAGGC-----------------TGCCTGAAT------------TAT i thaSir1.NW_013658704v1 N 0 C 0 s mm10.chr1 185120132 43 + 195471971 ----------AGACTTAGAAGATTAAT-----------GAGGACTCACATGGCAGA-----------------AGTTTGAC---------------- i mm10.chr1 I 14 C 0 s xenLae2.chr3S 90383870 48 - 120483113 ----------cactatta---actgattcattttgaaaaacattttttcccatgac-----------------ag-------------------tat i xenLae2.chr3S I 23 C 0 s nanPar1.KN906268v1 57055 26 + 1239783 ----------aaatatag---cataat-----------aacattt----------------------------ag-------------------cat i nanPar1.KN906268v1 I 14 C 0 s oreNil3.chrLG8 17502753 53 - 30802437 ----------CAGTGTGG---ATGTAT-----------ATGATGTCCTTTTGAGAC-----------------ACGCTCCTTTGGA---GTCTTAGT i oreNil3.chrLG8 C 0 I 14 s mayZeb1.JH720567 1138366 53 - 3270134 ----------CAGTGTGG---ATGTAT-----------ATGATGTCCTTTTGAGAC-----------------ACGCTCCTTTGGG---GTCTTGGT i mayZeb1.JH720567 C 0 I 14 s oryLat2.chr15 20658074 46 + 30000224 ----------CATTAAAA---GTAT-T-----------GTAATGGC------ATGC-----------------AAGCTTGTAAGTT---GTCTATAT i oryLat2.chr15 C 0 I 10 s danRer11.chr14 3330189 46 - 52660232 ----------CAGCATAA---CTGA-G-----------ATAAATTT------AAAA-----------------AGTCTTATCAAAT---TACTGTAT i danRer11.chr14 C 0 I 1 s petMar3.PIZI01000003v1 15972005 75 - 25736822 GATTTCCACAAACTGTAA---ACCCAGGAATGATAA--AACATGACCCCAGCAAAT-----------------AGACTCCAAAGATCACGCTTGCAT i petMar3.PIZI01000003v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I e gasAcu1.chrVI 7069498 223 - 17083675 I a score=-91194.000000 s galGal6.chrUn_NW_020110134v1 22535 19 + 23766 TCT--TCTAGACA-------ATT-------------------TAAGA----------- s pytBiv1.KE954334 63664 20 + 287271 CTTT-TCCTGACA-------ttt-------------------taagc----------- i pytBiv1.KE954334 C 0 C 0 s thaSir1.NW_013658704v1 449589 25 + 513332 TCTG-TGCTGACG--ATCTCTTC-------------------CAAGC----------- i thaSir1.NW_013658704v1 C 0 C 0 s mm10.chr1 185120175 15 + 195471971 -----TCCTGTCA--------CT-------------------GAAGA----------- i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90383918 44 - 120483113 ccct-taaagtag--GTGAAGTTAGCTAGGATTAACATGCCAgaaca----------- i xenLae2.chr3S C 0 C 0 s nanPar1.KN906268v1 57081 23 + 1239783 ttttGTGAAGCAGCAGTGGCgct----------------------------------- i nanPar1.KN906268v1 C 0 C 0 s tetNig2.chr1 20479902 3 - 22981688 --------------------------------------------TCC----------- i tetNig2.chr1 N 0 I 16 s oreNil3.chrLG8 17502820 3 - 30802437 --------------------------------------------ACC----------- i oreNil3.chrLG8 I 14 I 7 s mayZeb1.JH720567 1138433 3 - 3270134 --------------------------------------------ACC----------- i mayZeb1.JH720567 I 14 I 7 s oryLat2.chr15 20658130 3 + 30000224 --------------------------------------------TAT----------- i oryLat2.chr15 I 10 I 12 s danRer11.chr14 3330236 3 - 52660232 --------------------------------------------TCA----------- i danRer11.chr14 I 1 I 21 s petMar3.PIZI01000003v1 15972080 22 - 25736822 ------------------------------------CCGATTGAACATTGACCTCTGG i petMar3.PIZI01000003v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I e gasAcu1.chrVI 7069498 223 - 17083675 I a score=-220969.000000 s galGal6.chrUn_NW_020110134v1 22554 43 + 23766 Aga-------------ttcaggaacat--------------tttca---------------------------------gta--------tgtCTT-----------T---GTAATGTCTGCCTA s pytBiv1.KE954334 63684 40 + 287271 atat------------tgtgtgaacac--------------agaca---------------------------------ATG--------TGTCTT-----------C---GCTGTAAAAG---- i pytBiv1.KE954334 C 0 C 0 s thaSir1.NW_013658704v1 449614 43 + 513332 ACA--------------ACATGAACAAT----------GAGATACA---------------------------------AGA--------TACCTT-----------CA--GGAGCACTAG---- i thaSir1.NW_013658704v1 C 0 C 0 s mm10.chr1 185120190 47 + 195471971 AAA-------------CACTTTCACTTT----------CCACCTTG---------------------------------AGA--------TAATTT-----------TAACCAggtgctag---g i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90383962 33 - 120483113 aaa-------------taatttcctttta---------gtAGTATC---------------------------------Aga--------catttt----------------------------- i xenLae2.chr3S C 0 I 2 s nanPar1.KN906268v1 57104 26 + 1239783 ----------------ttattgcttttt-------------ttgtt---------------------------------aGA--------TATTTA----------------------------- i nanPar1.KN906268v1 C 0 I 29 s tetNig2.chr1 20479921 29 - 22981688 -------------------------------------AGAGTCCTC---------------------------------TTG--------TAATCTCCCGATGTATC------------------ i tetNig2.chr1 I 16 C 0 s fr3.chr1 19578205 38 - 23260604 ----------------------------agcttcagcagcagcttc---------------------------------ttg--------taATCCCCAGAGGTGTC------------------ i fr3.chr1 N 0 C 0 s oreNil3.chrLG8 17502830 29 - 30802437 ----------------------------AGCTTCAACAGCAGCTTC---------------------------------TTG--------TAATCCCC--------------------------- i oreNil3.chrLG8 I 7 n 7 s mayZeb1.JH720567 1138443 29 - 3270134 ----------------------------AGCTTCAACAGCAGCTTC---------------------------------TTG--------TAATCCCC--------------------------- i mayZeb1.JH720567 I 7 I 9 s oryLat2.chr15 20658145 27 + 30000224 ----------------------------gatttattcGATATCTGG---------------------------------TTG--------TTTTTA----------------------------- i oryLat2.chr15 I 12 I 9 s gasAcu1.chrVI 7069721 34 - 17083675 ----------------------------AATGAAAACAGTATTTTT---------------------------------CTAAAAGTGTTTACTT------------------------------ i gasAcu1.chrVI I 223 I 3 s danRer11.chr14 3330260 59 - 52660232 ----------------------------AATTGAAA-AGCATTTTCAGTTTTAGTTTTCCACCAAGCGCATCCGTCATTTTC--------TATTTC----------------------------- i danRer11.chr14 I 21 I 14 s petMar3.PIZI01000003v1 15972102 45 - 25736822 ---GGACTTTTAACCTTGATTACCCATGAACCTTGGGAGTGGCCTC---------------------------------GA-------------------------------------------- i petMar3.PIZI01000003v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-23.000000 s galGal6.chrUn_NW_020110134v1 22597 5 + 23766 ATCTC s pytBiv1.KE954334 63724 2 + 287271 ---GC i pytBiv1.KE954334 C 0 C 0 s mm10.chr1 185120237 5 + 195471971 gatgc i mm10.chr1 C 0 C 0 s petMar3.PIZI01000003v1 15972147 5 - 25736822 ATCTC i petMar3.PIZI01000003v1 C 0 C 0 e fr3.chr1 19578243 0 - 23260604 C e tetNig2.chr1 20479950 0 - 22981688 C e mayZeb1.JH720567 1138472 9 - 3270134 I e thaSir1.NW_013658704v1 449657 0 + 513332 C e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG8 17502859 7 - 30802437 I e danRer11.chr14 3330319 14 - 52660232 I e oryLat2.chr15 20658172 9 + 30000224 I e gasAcu1.chrVI 7069755 3 - 17083675 I e xenLae2.chr3S 90383995 2 - 120483113 I e nanPar1.KN906268v1 57130 29 + 1239783 I a score=-115106.000000 s galGal6.chrUn_NW_020110134v1 22602 15 + 23766 -AGCCACTCTAA-----------AA-TA s pytBiv1.KE954334 63726 18 + 287271 -AGCCTTTCTAGTT---------AAGCA i pytBiv1.KE954334 C 0 C 0 s thaSir1.NW_013658704v1 449657 17 + 513332 -ATCCTTTCTTAAT---------AA-TA i thaSir1.NW_013658704v1 C 0 C 0 s mm10.chr1 185120242 15 + 195471971 -agctcagctgg-----------ta-ga i mm10.chr1 C 0 C 0 s xenTro9.chr3 131699889 19 - 137218701 -agccattctcaaatg-------ca-ag i xenTro9.chr3 N 0 C 0 s xenLae2.chr3S 90383997 25 - 120483113 --attgttttcGTGTTGGTTTTCCA-GA i xenLae2.chr3S I 2 C 0 s nanPar1.KN906268v1 57159 19 + 1239783 -aaatattttcattgg-------cA-AA i nanPar1.KN906268v1 I 29 C 0 s tetNig2.chr1 20479950 11 - 22981688 -GTCCTGAGTGG---------------- i tetNig2.chr1 C 0 I 18 s fr3.chr1 19578243 6 - 23260604 -ACCCTG--------------------- i fr3.chr1 C 0 I 4 s oreNil3.chrLG13 8554596 11 + 32337344 -AGCCCAAGAAA---------------- i oreNil3.chrLG13 I 8 I 1 s mayZeb1.JH720567 1138481 11 - 3270134 -ACCCTGAGAAA---------------- i mayZeb1.JH720567 I 9 n 9 s oryLat2.chr15 20658181 10 + 30000224 -ACCGCAGAAC----------------- i oryLat2.chr15 I 9 I 24 s gasAcu1.chrVI 7069758 11 - 17083675 -GCTTTTAAATA---------------- i gasAcu1.chrVI I 3 I 8 s danRer11.chr14 3330333 11 - 52660232 -ATTCCGATGCA---------------- i danRer11.chr14 I 14 I 2 s petMar3.PIZI01000003v1 15972152 10 - 25736822 CAACTGTGAA------------------ i petMar3.PIZI01000003v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-102171.000000 s galGal6.chrUn_NW_020110134v1 22617 36 + 23766 CCCAACAGGT-GTCAAGGGGGATCATCCCc---ttaaaag s pytBiv1.KE954334 63744 16 + 287271 ACTGATAGG------------------------TTGATAT i pytBiv1.KE954334 C 0 C 0 s thaSir1.NW_013658704v1 449674 16 + 513332 TTCAGTGCa------------------------ttataaa i thaSir1.NW_013658704v1 C 0 C 0 s mm10.chr1 185120257 24 + 195471971 agccatggg-------------ttccatcc---ccagaac i mm10.chr1 C 0 C 0 s xenTro9.chr3 131699908 34 - 137218701 acaagcaA-----AAAGGGCTGTCCCTCCTT-TCTAGACT i xenTro9.chr3 C 0 I 2 s xenLae2.chr3S 90384022 29 - 120483113 GCCAGCAGC---CAGAGGATAGTTC--------CTATATA i xenLae2.chr3S C 0 I 2 s nanPar1.KN906268v1 57178 1 + 1239783 G--------------------------------------- i nanPar1.KN906268v1 C 0 n 0 s tetNig2.chr1 20479979 8 - 22981688 --------------------------------CGAGTTAT i tetNig2.chr1 I 18 I 24 s fr3.chr1 19578253 8 - 23260604 --------------------------------CGAAACAT i fr3.chr1 I 4 I 28 s oreNil3.chrLG13 8554608 8 + 32337344 --------------------------------TTAAACAT i oreNil3.chrLG13 I 1 I 12 s mayZeb1.AGTA02068962 1620 8 - 6537 --------------------------------TTAAACAT i mayZeb1.AGTA02068962 I 20 I 12 s oryLat2.chr15 20658215 8 + 30000224 --------------------------------CCAGATGT i oryLat2.chr15 I 24 I 14 s danRer11.chr14 3330346 8 - 52660232 --------------------------------CCTAATAT i danRer11.chr14 I 2 I 42 s petMar3.PIZI01000003v1 15972162 30 - 25736822 ---------TCCACAAGTGCTAACTTATCTTGGCAAACA- i petMar3.PIZI01000003v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I e gasAcu1.chrVI 7069769 8 - 17083675 I a score=-125262.000000 s galGal6.chrUn_NW_020110134v1 22653 27 + 23766 cacacagcaaatccCACT--------------TTTTGT---------------------GTC----------------------------- s pytBiv1.KE954334 63760 27 + 287271 TCTAAGCTGGCACCCAAA--------------GATGGA---------------------GTC----------------------------- i pytBiv1.KE954334 C 0 N 0 s thaSir1.NW_013658704v1 449690 27 + 513332 tacaaacaaaaccgCTAT--------------GATAAA---------------------TTT----------------------------- i thaSir1.NW_013658704v1 C 0 I 17 s mm10.chr1 185120281 23 + 195471971 cacaaacaacgaggc-at--------------ggtagc----------------------------------------------------- i mm10.chr1 C 0 C 0 s xenTro9.chr3 131699944 24 - 137218701 --AAGACTGATATTCATT--------------TATAGA---------------------TT------------------------------ i xenTro9.chr3 I 2 C 0 s xenLae2.chr3S 90384053 21 - 120483113 --AACACTGGTG---AAT--------------GATGCA---------------------GC------------------------------ i xenLae2.chr3S I 2 C 0 s tetNig2.chr1 20480011 14 - 22981688 ----------CAAAAAAT--------------CCTCCT----------------------------------------------------- i tetNig2.chr1 I 24 C 0 s fr3.chr1 19578289 18 - 23260604 ------cccccACATCAT--------------CCCGTG----------------------------------------------------- i fr3.chr1 I 28 C 0 s oreNil3.chrLG13 8554628 13 + 32337344 -----------aacagat--------------tttatt----------------------------------------------------- i oreNil3.chrLG13 I 12 C 0 s mayZeb1.AGTA02068962 1640 13 - 6537 -----------aacagat--------------tttagt----------------------------------------------------- i mayZeb1.AGTA02068962 I 12 C 0 s oryLat2.chr15 20658237 34 + 30000224 -----------aataaat--------------gttccttacattttatatttgtttacc-------------------------------- i oryLat2.chr15 I 14 C 0 s gasAcu1.chrVI 7069777 22 - 17083675 -----------ATGCAAT--------------GGTAAT------------TTTTTTACT-------------------------------- i gasAcu1.chrVI I 8 C 0 s danRer11.chr14 3330396 27 - 52660232 -----------AATAAATACAAGACATGTAGATTTAGT----------------------------------------------------- i danRer11.chr14 I 42 C 0 s petMar3.PIZI01000003v1 15972192 47 - 25736822 ------CTTGCAGTGGAT--------------GTTGTT------------------------ACTTCTGAACCCAAGTTAACTGTGACCTC i petMar3.PIZI01000003v1 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I e nanPar1.KN906268v1 57179 0 + 1239783 I a score=-43340.000000 s galGal6.chrUn_NW_020110134v1 22680 9 + 23766 TAAGA-----TCAA s pytBiv1.KE959146 40949 9 - 65961 TAAGA-----TCAA i pytBiv1.KE959146 N 0 I 5 s thaSir1.NW_013658704v1 449734 4 + 513332 ----------GCAA i thaSir1.NW_013658704v1 I 17 I 5 s mm10.chr1 185120304 4 + 195471971 ----------acac i mm10.chr1 C 0 I 5 s xenTro9.chr3 131699968 4 - 137218701 ----T-----ACA- i xenTro9.chr3 C 0 I 2 s xenLae2.chr3S 90384074 5 - 120483113 ----T-----GCAC i xenLae2.chr3S C 0 I 5 s tetNig2.chr1 20480025 3 - 22981688 ----------AAA- i tetNig2.chr1 C 0 I 4 s fr3.chr1 19578307 4 - 23260604 ----------AAAC i fr3.chr1 C 0 I 16 s oreNil3.chrLG13 8554641 4 + 32337344 ----------gGAT i oreNil3.chrLG13 C 0 I 27 s mayZeb1.AGTA02068962 1653 4 - 6537 ----------gGAT i mayZeb1.AGTA02068962 C 0 I 27 s oryLat2.chr15 20658271 8 + 30000224 ----a--aaaaaaa i oryLat2.chr15 C 0 N 0 s gasAcu1.chrVI 7069799 10 - 17083675 ----AACACAATAA i gasAcu1.chrVI C 0 I 10 s danRer11.chr14 3330423 4 - 52660232 ----------GTAT i danRer11.chr14 C 0 I 7 s petMar3.PIZI01000003v1 15972239 9 - 25736822 -----TGATCTCAA i petMar3.PIZI01000003v1 C 0 I 6 e melGal5.chr24 118646 3332 - 4088881 I e nanPar1.KN906268v1 57179 0 + 1239783 I a score=-12713.000000 s galGal6.chrUn_NW_020110134v1 22689 5 + 23766 CAA-GT---- s pytBiv1.KE959146 40963 5 - 65961 GGA-AC---- i pytBiv1.KE959146 I 5 C 0 s thaSir1.NW_013658704v1 449743 6 + 513332 CAATAT---- i thaSir1.NW_013658704v1 I 5 C 0 s mm10.chr1 185120313 5 + 195471971 taa-cc---- i mm10.chr1 I 5 C 0 s xenTro9.chr3 131699974 5 - 137218701 CTA-AT---- i xenTro9.chr3 I 2 N 0 s xenLae2.chr3S 90384084 5 - 120483113 TGA-AT---- i xenLae2.chr3S I 5 I 7 s petMar3.PIZI01000003v1 15972254 5 - 25736822 -----CAGGT i petMar3.PIZI01000003v1 I 6 C 0 s letCam1.KE993907 798186 5 - 874331 -----CAAGC i letCam1.KE993907 N 0 C 0 e fr3.chr1 19578311 16 - 23260604 I e tetNig2.chr1 20480028 4 - 22981688 I e mayZeb1.AGTA02068962 1657 27 - 6537 I e melGal5.chr24 118646 3332 - 4088881 I e oreNil3.chrLG13 8554645 27 + 32337344 I e danRer11.chr14 3330427 7 - 52660232 I e gasAcu1.chrVI 7069809 10 - 17083675 I e nanPar1.KN906268v1 57179 0 + 1239783 I a score=-9956.000000 s galGal6.chrUn_NW_020110134v1 22694 1 + 23766 -T s pytBiv1.KE959146 40968 1 - 65961 -T i pytBiv1.KE959146 C 0 C 0 s thaSir1.NW_013658704v1 449749 1 + 513332 -T i thaSir1.NW_013658704v1 C 0 C 0 s mm10.chr1 185120318 1 + 195471971 -c i mm10.chr1 C 0 C 0 s xenTro9.chr3 25438351 1 - 137218701 -T i xenTro9.chr3 N 0 C 0 s xenLae2.chr3S 90384096 1 - 120483113 -T i xenLae2.chr3S I 7 C 0 s nanPar1.KN906005v1 611546 1 + 2048838 -T i nanPar1.KN906005v1 I 2470 C 0 s tetNig2.chr1 20480032 1 - 22981688 -C i tetNig2.chr1 I 4 C 0 s fr3.chr1 19578327 1 - 23260604 -T i fr3.chr1 I 16 C 0 s oreNil3.chrLG13 8554672 1 + 32337344 -T i oreNil3.chrLG13 I 27 C 0 s mayZeb1.AGTA02068962 1684 1 - 6537 -T i mayZeb1.AGTA02068962 I 27 C 0 s oryLat2.chr12 13635047 1 + 30041894 -T i oryLat2.chr12 N 0 C 0 s gasAcu1.chrVI 7069819 1 - 17083675 -T i gasAcu1.chrVI I 10 C 0 s angJap1.KI313603 18936 1 - 21249 -t i angJap1.KI313603 N 0 C 0 s danRer11.chr14 3330434 1 - 52660232 -G i danRer11.chr14 I 7 C 0 s petMar3.PIZI01000003v1 15972259 1 - 25736822 G- i petMar3.PIZI01000003v1 C 0 C 0 s letCam1.KE993907 798191 1 - 874331 G- i letCam1.KE993907 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-16167.000000 s galGal6.chrUn_NW_020110134v1 22695 1 + 23766 -T s pytBiv1.KE959146 40969 1 - 65961 -C i pytBiv1.KE959146 C 0 C 0 s thaSir1.NW_013658704v1 449750 1 + 513332 -T i thaSir1.NW_013658704v1 C 0 C 0 s anoCar2.chrUn_AAWZ02038318 8215 1 + 12106 -T i anoCar2.chrUn_AAWZ02038318 N 0 C 0 s hg38.chr2 172372705 1 - 242193529 -T i hg38.chr2 N 0 C 0 s mm10.chr1 185120319 1 + 195471971 -t i mm10.chr1 C 0 C 0 s xenTro9.chr3 25438352 1 - 137218701 -T i xenTro9.chr3 C 0 C 0 s xenLae2.chr3S 90384097 1 - 120483113 -C i xenLae2.chr3S C 0 C 0 s nanPar1.KN906005v1 611547 1 + 2048838 -C i nanPar1.KN906005v1 C 0 C 0 s tetNig2.chr1 20480033 1 - 22981688 -A i tetNig2.chr1 C 0 C 0 s fr3.chr1 19578328 1 - 23260604 -G i fr3.chr1 C 0 C 0 s oreNil3.chrLG13 8554673 1 + 32337344 -T i oreNil3.chrLG13 C 0 C 0 s mayZeb1.AGTA02068962 1685 1 - 6537 -T i mayZeb1.AGTA02068962 C 0 C 0 s oryLat2.chr12 13635048 1 + 30041894 -C i oryLat2.chr12 C 0 C 0 s gasAcu1.chrVI 7069820 1 - 17083675 -T i gasAcu1.chrVI C 0 C 0 s angJap1.KI313603 18937 1 - 21249 -c i angJap1.KI313603 C 0 C 0 s danRer11.chr14 3330435 1 - 52660232 -C i danRer11.chr14 C 0 C 0 s petMar3.PIZI01000003v1 15972260 1 - 25736822 G- i petMar3.PIZI01000003v1 C 0 N 0 s letCam1.KE993907 798192 1 - 874331 A- i letCam1.KE993907 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=599396.000000 s galGal6.chrUn_NW_020110134v1 22696 129 + 23766 ACCTTAA---TGAAGGAGTAGAGAGACTTCCCATA---CATAGTCAGGAGCTC-TCTTCCGATATCCAGTATATCTATCTTGAGGCGGAACACCACCACTCTGATCAGAGTGTTGCCATCTGTTCCCAGGCCCTA----G----- s pytBiv1.KE959146 40970 129 - 65961 ACCTTAA---TGAAAGAGTAGAGGGATTTTCCATA---CGTGCGCTTGAACTC-TGCCTTAATATCGATCATGTCGATCTCACAGCGAGAGACCATCAGTCGAACGAGAGTGTCGTCATCGGTCCCTAACCCCTG----G----- i pytBiv1.KE959146 C 0 I 443 s thaSir1.NW_013658704v1 449751 129 + 513332 ACCTCAA---TCATATGATGCAAAGATTTTTCATA---CTTAGTCCGGAATAT-TTCCCGAATATCCAACATATCAATCTCACTTCGTGACACCATGATGCGAATCAGCGTGTTATCCCTTGTCCCAAAACCCTA----G----- i thaSir1.NW_013658704v1 C 0 C 0 s anoCar2.chrUn_AAWZ02038318 8216 129 + 12106 ACCTTGA---TGAAGGCGTAGAGGGACTTCCCGTA---CATCCGCTTGAAGTC-CGCCTTGATGTCAATCATGTCGATCTCACAACGGGACACCATCAGGCGGATGAGCGTGTCGTCGTCCGTCCCCAGGCCCTG----C----- i anoCar2.chrUn_AAWZ02038318 C 0 C 0 s hg38.chr2 172372706 129 - 242193529 ACCTTGA---TGAACGAGTACAGAGACTTTCCATA---GAGTCTCTTGAAGTG-TGCCCGGATATCCAACATGTCAATTTCTGCTCGAGAAACCATCACTCTGATGAGGGTGTTATCATCGGTGCCCAAGCCCTA----A----- i hg38.chr2 C 0 I 2 s mm10.chr1 185120320 85 + 195471971 agcagaaagctgaaggattaaaaa----ttcaagg---acatctttgg------------------ttacatagcaagttct------------------------aggacatcttggac--tacacaaggctcc----a----- i mm10.chr1 C 0 I 2 s xenTro9.chr3 25438353 129 - 137218701 ACCTTAA---TAAAGGAATGCAGAGATTTGCCATA---CATCTTCTTGAACTC-GCTGCGGATTTCCAGCATGTCAATTTCACAGCGAGAAACCATAACTCTGATCAGAGTTTTATCATCTGTCCCCAGACCCTG----C----- i xenTro9.chr3 C 0 I 2 s xenLae2.chr3S 90384098 129 - 120483113 ACCTTAA---TAAAGGAATGTAGGGATTTCCCATA---CATTTTCTTGAACTC-GCAGCGGATTTCCAGCATGTCAATTTCACAACGAGAAACCATAACTCTGATCAGAGTTTTATCATCTGTCCCCATACCCTG----C----- i xenLae2.chr3S C 0 I 2 s nanPar1.KN906005v1 611548 129 + 2048838 ACCTTGA---TAAAGGAATGCAGAGACTTGCCATA---CATCTTCTTGAACTC-TGAGCGGATTTCCAACATGTCAACTTCACAGCGAGAAACCATTACTCTGATAAGCGTGTTGTCGTCTGTGCCCAGGCCCTG----T----- i nanPar1.KN906005v1 C 0 I 2 s tetNig2.chr1 20480034 128 - 22981688 ACCTTGA---TCATGTTATACAGCGATTTCTCATA----TTTCAGACGGAAACATTCCCTGATGTCCAACATGTCTATCTCGGAGCGGGAAATCATGATCCTGATTAGTGTGTTGTCAGCTGTCCCAAGACCCTG---------- i tetNig2.chr1 C 0 C 0 s fr3.chr1 19578329 129 - 23260604 ACCGAGA---TGTCAGTGTAAAGTGATTTCCCATA---GGTCCTGACGTAGGC-CTGTCTGATGTCCAGCATGTCTACCTCAGAGCGGGACACCATGACGCGGATGAGGGTCCTGTCCTTGGTTCCTGCTCCCTG----T----- i fr3.chr1 C 0 I 1 s oreNil3.chrLG13 8554674 129 + 32337344 ACAGAGA---TCGCAGTGTACAGAGACTTGCCGTA---ATTTTTCACATACTC-CTGGCGAATGTCCAGCATGTCAACCTCGGAACGGGAGACCATGATCCGGATCagagttttgtcttttgtcccAGCTCCCTG----c----- i oreNil3.chrLG13 C 0 C 0 s mayZeb1.AGTA02068962 1686 129 - 6537 ACAGAGA---TCGCAGTGTACAGAGACTTGCCGTA---ATTTTTCAAATACTC-CTGGCGAATGTCCAGCATGTCAACCTCGGAACGGGAGACCATGATCCGGATcagagttttgtcttttgtcccagctccctg----c----- i mayZeb1.AGTA02068962 C 0 C 0 s oryLat2.chr12 13635049 128 + 30041894 ACCTTGA---TGAAAGAGTGTAGAGACTTTCCATA---CGTCTTCAGGAAGTG-TTCCTTAATGTCCAGCATGTCAATCTCGGCCCTGGACACCATTATTCTTATGAGGACACTGTCTGTGGTGCCCAAGCCCTG---------- i oryLat2.chr12 C 0 C 0 s gasAcu1.chrVI 7069821 133 - 17083675 ACAGAGA---TGTGTGTGTACAGCGACTTGCCGTA---GTTTTTGACATACTC-CTGGCGAATATCCAGCATGTCAACTTCAGAGCGGGTGACCATGATCCGGATGAGGGTTGTGTCTTTGGTCCCAGCTCCCTGAAAac----- i gasAcu1.chrVI C 0 C 0 s angJap1.KI313603 18938 129 - 21249 acctTGA---TGAAAGAGTGGAGCGTCTTGCCGTA---CATCTTGAGGAACTC-GGCTTTGATGTCGAGCATGTCAATCTCAGCCCGAGCCACCATGATTCTGATCAGCACGCTGTCTGTGGTCCCCAGGCCCTG----C----- i angJap1.KI313603 C 0 C 0 s danRer11.chr14 3330436 129 - 52660232 ACCTGAA---TCATGTTGTACAGTGATTTCTCATAGCGCAGCCTGAAACACT----CTCTGATGTCTAGCATGTCGATCTCCGAGCGAGACACCATGATGCGGATCAGAGTGTTATCAGCTGTGCCCAAACCCTG----C----- i danRer11.chr14 C 0 C 0 s petMar3.PIZI01000044v1 4872514 134 + 10753504 ACCTTGA---TGAAGGAGTAGAGGGACTTCCCGTA---GAGGCGCTTGAACTC-GGCTCGGATGTCCAGCATGTCCACCTCGCAGCGCGACACCATGATGCGCATTAGCGTTGCGTCATCCGTGCCGGCGCCCTG----CATCAG i petMar3.PIZI01000044v1 N 0 C 0 s letCam1.KE993907 798193 134 - 874331 ACCTTGA---TGAAGGAGTAGAGAGACTTCCCGTA---GAGGCGCTTGAACTC-GGCTCGGATGTCCAGCATGTCCACCTCGCAGCGCGACACCATGATGCGCATTAGCGTCGCGTCATCCGTGCCGGCGCCCTG----CATCAG i letCam1.KE993907 C 0 C 0 e melGal5.chr24 118646 3332 - 4088881 I a score=-46557.000000 s galGal6.chrUn_NW_020110134v1 22825 4 + 23766 GAAG--------- s thaSir1.NW_013658704v1 449880 4 + 513332 AATG--------- i thaSir1.NW_013658704v1 C 0 C 0 s anoCar2.chrUn_AAWZ02038318 8345 4 + 12106 GGGG--------- i anoCar2.chrUn_AAWZ02038318 C 0 I 940 s hg38.chr2 172372837 2 - 242193529 AA----------- i hg38.chr2 I 2 C 0 s mm10.chr1 185120407 2 + 195471971 ta----------- i mm10.chr1 I 2 C 0 s xenTro9.chr3 25438484 2 - 137218701 AA----------- i xenTro9.chr3 I 2 I 2 s xenLae2.chr3S 90384229 2 - 120483113 CA----------- i xenLae2.chr3S I 2 I 2 s nanPar1.KN906005v1 611679 2 + 2048838 CA----------- i nanPar1.KN906005v1 I 2 I 1 s oreNil3.chrLG13 8554803 1 + 32337344 ---a--------- i oreNil3.chrLG13 C 0 I 3 s mayZeb1.AGTA02068962 1815 1 - 6537 ---a--------- i mayZeb1.AGTA02068962 C 0 I 3 s oryLat2.chr12 13635177 1 + 30041894 ---A--------- i oryLat2.chr12 C 0 I 3 s gasAcu1.chrVI 7069954 1 - 17083675 ---a--------- i gasAcu1.chrVI C 0 I 3 s angJap1.KI313603 19067 1 - 21249 ---G--------- i angJap1.KI313603 C 0 I 3 s danRer11.chr14 3330565 1 - 52660232 ---G--------- i danRer11.chr14 C 0 I 3 s petMar3.PIZI01000044v1 4872648 11 + 10753504 --AAACGGTTGCG i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 798327 11 - 874331 --AAACGGTTGCG i letCam1.KE993907 C 0 C 0 e fr3.chr1 19578458 1 - 23260604 I e tetNig2.chr1 20480162 0 - 22981688 C e pytBiv1.KE959146 41099 443 - 65961 I e melGal5.chr24 118646 3332 - 4088881 I a score=2854.000000 s galGal6.chrUn_NW_020110134v1 22829 2 + 23766 CA s thaSir1.NW_013658704v1 449884 2 + 513332 AA i thaSir1.NW_013658704v1 C 0 I 1182 s hg38.chr2 172372839 2 - 242193529 GA i hg38.chr2 C 0 C 0 s mm10.chr1 185120409 2 + 195471971 aa i mm10.chr1 C 0 C 0 s oreNil3.chrLG13 8554807 1 + 32337344 -a i oreNil3.chrLG13 I 3 I 1 s mayZeb1.AGTA02068962 1819 1 - 6537 -a i mayZeb1.AGTA02068962 I 3 I 1 s oryLat2.chr12 13635181 1 + 30041894 -A i oryLat2.chr12 I 3 I 1 s gasAcu1.chrVI 7069958 1 - 17083675 -a i gasAcu1.chrVI I 3 I 1 s angJap1.KI313603 19071 1 - 21249 -G i angJap1.KI313603 I 3 I 1 s danRer11.chr14 3330569 1 - 52660232 -A i danRer11.chr14 I 3 I 1 s petMar3.PIZI01000044v1 4872659 2 + 10753504 CA i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 798338 2 - 874331 CA i letCam1.KE993907 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578458 1 - 23260604 I e tetNig2.chr1 20480162 0 - 22981688 C e pytBiv1.KE959146 41099 443 - 65961 I e melGal5.chr24 118646 3332 - 4088881 I e xenLae2.chr3S 90384231 2 - 120483113 I e nanPar1.KN906005v1 611681 1 + 2048838 I e xenTro9.chr3 25438486 2 - 137218701 I a score=-4615.000000 s galGal6.chrUn_NW_020110134v1 22831 3 + 23766 AAG- s hg38.chr2 172372841 3 - 242193529 AAA- i hg38.chr2 C 0 C 0 s mm10.chr1 185120411 3 + 195471971 aaa- i mm10.chr1 C 0 C 0 s xenTro9.chr3 25438488 3 - 137218701 GAA- i xenTro9.chr3 I 2 C 0 s xenLae2.chr3S 90384233 3 - 120483113 GAA- i xenLae2.chr3S I 2 C 0 s nanPar1.KN906005v1 611682 3 + 2048838 GAA- i nanPar1.KN906005v1 I 1 C 0 s tetNig2.chr1 20480162 3 - 22981688 GAA- i tetNig2.chr1 C 0 I 1 s fr3.chr1 19578459 3 - 23260604 AAA- i fr3.chr1 I 1 I 1 s oreNil3.chrLG13 8554809 3 + 32337344 aca- i oreNil3.chrLG13 I 1 I 1 s mayZeb1.AGTA02068962 1821 3 - 6537 aaa- i mayZeb1.AGTA02068962 I 1 I 1 s oryLat2.chr12 13635183 3 + 30041894 GAA- i oryLat2.chr12 I 1 I 1 s gasAcu1.chrVI 7069960 3 - 17083675 aca- i gasAcu1.chrVI I 1 I 1 s angJap1.KI313603 19073 3 - 21249 ACC- i angJap1.KI313603 I 1 I 4 s danRer11.chr14 3330571 3 - 52660232 ATG- i danRer11.chr14 I 1 N 0 s petMar3.PIZI01000044v1 4872661 3 + 10753504 -AAT i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 798340 3 - 874331 -AAT i letCam1.KE993907 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I a score=2817.000000 s galGal6.chrUn_NW_020110134v1 22834 3 + 23766 CAA s hg38.chr2 172372844 3 - 242193529 CGA i hg38.chr2 C 0 I 1336 s mm10.chr1 185120414 3 + 195471971 caa i mm10.chr1 C 0 C 0 s xenTro9.chr3 25438491 3 - 137218701 GAA i xenTro9.chr3 C 0 C 0 s xenLae2.chr3S 90384236 3 - 120483113 GAG i xenLae2.chr3S C 0 C 0 s nanPar1.KN906005v1 611685 3 + 2048838 GAA i nanPar1.KN906005v1 C 0 C 0 s tetNig2.chr1 20480166 3 - 22981688 TAA i tetNig2.chr1 I 1 C 0 s fr3.chr1 19578463 3 - 23260604 CAT i fr3.chr1 I 1 C 0 s oreNil3.chrLG13 8554813 3 + 32337344 taa i oreNil3.chrLG13 I 1 C 0 s mayZeb1.AGTA02068962 1825 3 - 6537 taa i mayZeb1.AGTA02068962 I 1 C 0 s oryLat2.chr12 13635187 3 + 30041894 AAA i oryLat2.chr12 I 1 C 0 s gasAcu1.chrVI 7069964 3 - 17083675 aca i gasAcu1.chrVI I 1 C 0 s angJap1.KI313603 19080 3 - 21249 GAT i angJap1.KI313603 I 4 C 0 s petMar3.PIZI01000044v1 4872664 3 + 10753504 CAA i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 798343 3 - 874331 CAA i letCam1.KE993907 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I a score=-9090.000000 s galGal6.chrUn_NW_020110134v1 22837 4 + 23766 CCAC--- s mm10.chr1 185120417 3 + 195471971 aca---- i mm10.chr1 C 0 C 0 s tetNig2.chr1 20480169 1 - 22981688 ---C--- i tetNig2.chr1 C 0 I 9 s fr3.chr1 19578466 1 - 23260604 ---C--- i fr3.chr1 C 0 I 37 s oreNil3.chrLG13 8554816 1 + 32337344 ---c--- i oreNil3.chrLG13 C 0 C 0 s mayZeb1.AGTA02068962 1828 1 - 6537 ---c--- i mayZeb1.AGTA02068962 C 0 C 0 s oryLat2.chr12 13635190 1 + 30041894 ---C--- i oryLat2.chr12 C 0 I 3 s gasAcu1.chrVI 7069967 1 - 17083675 ---c--- i gasAcu1.chrVI C 0 C 0 s angJap1.KI313603 19083 1 - 21249 ---C--- i angJap1.KI313603 C 0 I 2 s petMar3.PIZI01000044v1 4872667 4 + 10753504 ---CAAA i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 798346 4 - 874331 ---CAAA i letCam1.KE993907 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I e xenLae2.chr3S 90384239 0 - 120483113 C e nanPar1.KN906005v1 611688 0 + 2048838 C e xenTro9.chr3 25438494 0 - 137218701 C e hg38.chr2 172372847 1336 - 242193529 I a score=-24856.000000 s galGal6.chrUn_NW_020110134v1 22841 5 + 23766 GTACA-- s mm10.chr1 185120420 1 + 195471971 ----a-- i mm10.chr1 C 0 C 0 s xenTro9.chr3 25438494 4 - 137218701 -CATA-- i xenTro9.chr3 C 0 I 2814 s xenLae2.chr3S 90384239 4 - 120483113 -CCCA-- i xenLae2.chr3S C 0 I 5 s nanPar1.KN906005v1 611688 4 + 2048838 -TGGA-- i nanPar1.KN906005v1 C 0 I 6 s tetNig2.chr1 20480179 2 - 22981688 ---TA-- i tetNig2.chr1 I 9 I 3 s oreNil3.chrLG13 8554817 5 + 32337344 acaca-- i oreNil3.chrLG13 C 0 I 55 s mayZeb1.AGTA02068962 1829 5 - 6537 acgca-- i mayZeb1.AGTA02068962 C 0 I 50 s oryLat2.chr12 13635194 5 + 30041894 AGACT-- i oryLat2.chr12 I 3 C 0 s gasAcu1.chrVI 7069968 5 - 17083675 gcaca-- i gasAcu1.chrVI C 0 C 0 s angJap1.KI313603 19086 4 - 21249 -GTCA-- i angJap1.KI313603 I 2 C 0 s danRer11.chr5 65010203 3 + 72500376 --CCA-- i danRer11.chr5 N 0 C 0 s petMar3.PIZI01000044v1 4872671 5 + 10753504 --gtgcc i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 798350 5 - 874331 --GTGGC i letCam1.KE993907 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578467 37 - 23260604 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I e hg38.chr2 172372847 1336 - 242193529 I a score=-3128.000000 s galGal6.chrUn_NW_020110134v1 22846 4 + 23766 GCTA s mm10.chr1 185120421 4 + 195471971 acaa i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90384248 4 - 120483113 TATA i xenLae2.chr3S I 5 C 0 s nanPar1.KN906005v1 611698 4 + 2048838 GCTA i nanPar1.KN906005v1 I 6 C 0 s oreNil3.chrLG6 16467709 3 - 44571662 -gtg i oreNil3.chrLG6 n 55 C 0 s oryLat2.chr12 13635199 4 + 30041894 GATG i oryLat2.chr12 C 0 C 0 s gasAcu1.chrVI 7069973 4 - 17083675 caca i gasAcu1.chrVI C 0 C 0 s angJap1.KI313603 19090 4 - 21249 GGTT i angJap1.KI313603 C 0 C 0 s danRer11.chr5 65010206 4 + 72500376 TATT i danRer11.chr5 C 0 C 0 s petMar3.PIZI01000044v1 4872676 4 + 10753504 acta i petMar3.PIZI01000044v1 C 0 I 131 s letCam1.KE993907 798355 4 - 874331 ACTA i letCam1.KE993907 C 0 I 582 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578467 37 - 23260604 I e tetNig2.chr1 20480181 3 - 22981688 I e mayZeb1.AGTA02068962 1834 50 - 6537 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=2779.000000 s galGal6.chrUn_NW_020110134v1 22850 2 + 23766 AC s mm10.chr1 185120425 2 + 195471971 ac i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90384252 2 - 120483113 TT i xenLae2.chr3S C 0 C 0 s nanPar1.KN906005v1 611702 2 + 2048838 AT i nanPar1.KN906005v1 C 0 C 0 s oreNil3.chrLG6 16467712 2 - 44571662 ac i oreNil3.chrLG6 C 0 C 0 s oryLat2.chr12 13635203 2 + 30041894 AT i oryLat2.chr12 C 0 C 0 s gasAcu1.chrVI 7069977 2 - 17083675 AC i gasAcu1.chrVI C 0 C 0 s angJap1.KI313603 19094 2 - 21249 ac i angJap1.KI313603 C 0 I 1661 s danRer11.chr5 65010210 2 + 72500376 AC i danRer11.chr5 C 0 I 4 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578467 37 - 23260604 I e tetNig2.chr1 20480181 3 - 22981688 I e mayZeb1.AGTA02068962 1834 50 - 6537 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I e letCam1.KE993907 798359 582 - 874331 I e petMar3.PIZI01000044v1 4872680 131 + 10753504 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=1020.000000 s galGal6.chrUn_NW_020110134v1 22852 3 + 23766 ACA s mm10.chr1 185120427 3 + 195471971 aaa i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90384254 3 - 120483113 CCA i xenLae2.chr3S C 0 C 0 s nanPar1.KN906005v1 611704 3 + 2048838 ACA i nanPar1.KN906005v1 C 0 C 0 s oreNil3.chrLG6 16467714 3 - 44571662 CAA i oreNil3.chrLG6 C 0 C 0 s mayZeb1.JH720515 957307 1 + 7287419 --A i mayZeb1.JH720515 n 50 C 0 s oryLat2.chr12 13635205 3 + 30041894 CCA i oryLat2.chr12 C 0 I 680 s gasAcu1.chrVI 7069979 3 - 17083675 GAA i gasAcu1.chrVI C 0 C 0 s danRer11.chr5 65010216 1 + 72500376 --A i danRer11.chr5 I 4 I 2 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578467 37 - 23260604 I e tetNig2.chr1 20480181 3 - 22981688 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e petMar3.PIZI01000044v1 4872680 131 + 10753504 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-1165.000000 s galGal6.chrUn_NW_020110134v1 22855 1 + 23766 G s mm10.chr1 185120430 1 + 195471971 c i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90384257 1 - 120483113 T i xenLae2.chr3S C 0 C 0 s nanPar1.KN906005v1 611707 1 + 2048838 A i nanPar1.KN906005v1 C 0 C 0 s oreNil3.chrLG6 16467717 1 - 44571662 A i oreNil3.chrLG6 C 0 C 0 s mayZeb1.JH720515 957308 1 + 7287419 A i mayZeb1.JH720515 C 0 C 0 s gasAcu1.chrVI 7069982 1 - 17083675 G i gasAcu1.chrVI C 0 I 73 s danRer11.chr5 65010219 1 + 72500376 G i danRer11.chr5 I 2 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578467 37 - 23260604 I e tetNig2.chr1 20480181 3 - 22981688 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e oryLat2.chr12 13635208 680 + 30041894 I e petMar3.PIZI01000044v1 4872680 131 + 10753504 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=844.000000 s galGal6.chrUn_NW_020110134v1 22856 2 + 23766 AA s mm10.chr1 185120431 2 + 195471971 aa i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90384258 2 - 120483113 GA i xenLae2.chr3S C 0 I 10 s nanPar1.KN906005v1 611708 2 + 2048838 GA i nanPar1.KN906005v1 C 0 I 8566 s oreNil3.chrLG6 16467718 2 - 44571662 CA i oreNil3.chrLG6 C 0 C 0 s mayZeb1.JH720515 957309 2 + 7287419 CA i mayZeb1.JH720515 C 0 C 0 s danRer11.chr5 65010220 2 + 72500376 CA i danRer11.chr5 C 0 I 1063 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578467 37 - 23260604 I e tetNig2.chr1 20480181 3 - 22981688 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e oryLat2.chr12 13635208 680 + 30041894 I e gasAcu1.chrVI 7069983 73 - 17083675 I e petMar3.PIZI01000044v1 4872680 131 + 10753504 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-1109.000000 s galGal6.chrUn_NW_020110134v1 22858 3 + 23766 CCT s mm10.chr1 185120433 3 + 195471971 aca i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90384270 2 - 120483113 AC- i xenLae2.chr3S I 10 C 0 s oreNil3.chrLG6 16467720 3 - 44571662 CCT i oreNil3.chrLG6 C 0 C 0 s mayZeb1.JH720515 957311 3 + 7287419 CCT i mayZeb1.JH720515 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578467 37 - 23260604 I e tetNig2.chr1 20480181 3 - 22981688 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e danRer11.chr5 65010222 1063 + 72500376 I e oryLat2.chr12 13635208 680 + 30041894 I e gasAcu1.chrVI 7069983 73 - 17083675 I e petMar3.PIZI01000044v1 4872680 131 + 10753504 I e nanPar1.KN906005v1 611710 8566 + 2048838 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-15622.000000 s galGal6.chrUn_NW_020110134v1 22861 26 + 23766 TCTGGAGAATCACCG---ACAGA--CACAAA s mm10.chr1 185120436 22 + 195471971 aacagataaT----G---TTAAA--CACAAC i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90384272 30 - 120483113 -ACCGGGAAGacattgggacagatttactga i xenLae2.chr3S C 0 C 0 s nanPar1.KN906015v1 1472268 25 - 1999786 TTTCAAGAATAATTC---ACAAA---ACAAA i nanPar1.KN906015v1 n 8566 C 0 s tetNig2.chr1 20480184 11 - 22981688 ------------------ACTAG--CACTGA i tetNig2.chr1 I 3 C 0 s fr3.chr14 5931726 9 - 12328026 --------------------GGA--CACAGA i fr3.chr14 n 37 C 0 s oreNil3.chrLG6 16467723 12 - 44571662 -----------------CACAAA--CATCAA i oreNil3.chrLG6 C 0 C 0 s mayZeb1.JH720515 957314 12 + 7287419 -----------------CACAAA--CATCAA i mayZeb1.JH720515 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e danRer11.chr5 65010222 1063 + 72500376 I e oryLat2.chr12 13635208 680 + 30041894 I e gasAcu1.chrVI 7069983 73 - 17083675 I e petMar3.PIZI01000044v1 4872680 131 + 10753504 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-21188.000000 s galGal6.chrUn_NW_020110134v1 22887 14 + 23766 -----GGCCT-CAGTGCCCG s mm10.chr1 185120458 5 + 195471971 -----AGCTT---------- i mm10.chr1 C 0 C 0 s xenLae2.chr3S 90384302 15 - 120483113 -----agggcgaagtggccg i xenLae2.chr3S C 0 I 718 s nanPar1.KN906015v1 1472293 14 - 1999786 -----AGCCTAGAATATAC- i nanPar1.KN906015v1 C 0 C 0 s tetNig2.chr1 20480195 12 - 22981688 GG--CAACTGGAAA------ i tetNig2.chr1 C 0 C 0 s fr3.chr14 5931735 12 - 12328026 GG--CAACTGGAAA------ i fr3.chr14 C 0 C 0 s oreNil3.chrLG6 16467735 14 - 44571662 CGCACAACTGTAAA------ i oreNil3.chrLG6 C 0 C 0 s mayZeb1.JH720515 957326 14 + 7287419 CGCACAACCGTAAA------ i mayZeb1.JH720515 C 0 C 0 s gasAcu1.chrXIX 7820721 8 - 20240660 -----AACTTCAC------- i gasAcu1.chrXIX n 73 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e danRer11.chr5 65010222 1063 + 72500376 I e oryLat2.chr12 13635208 680 + 30041894 I e petMar3.PIZI01000044v1 4872680 131 + 10753504 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-57012.000000 s galGal6.chrUn_NW_020110134v1 22901 61 + 23766 GTCTTGTGCAGGAGCTGTT-------------------------------------CTTAGTTAGAGCATTTCTGCATTAATGGA--GCG--------ATCCATTAGC s mm10.chr1 185120463 28 + 195471971 ------------------T-------------------------------------CTTAATAG------------ACTAAGGGT--TGG--------ATGCATA--- i mm10.chr1 C 0 C 0 s nanPar1.KN906015v1 1472307 46 - 1999786 -----------ATTCTGTT-------------------------------------CAGAGTTC------------ATAAATGAA--ACTTCTTTTTCATCCATTGGA i nanPar1.KN906015v1 C 0 C 0 s tetNig2.chr1 20480207 44 - 22981688 GACTGTTACAGGCTGTTAA-------------------------------------ACACTCCG------------CTGGAAGTA--AGC----------TTAGC--- i tetNig2.chr1 C 0 C 0 s fr3.chr14 5931747 85 - 12328026 GGCTATTGCAAGAAATTAGCTCTTATTCCCAGGACTGATGATATAATTTTGTTCTTACAACTTG----------TTCTCAATGTATCAGC----------TCAGC--- i fr3.chr14 C 0 C 0 s oreNil3.chrLG6 16467749 37 - 44571662 AGA---TACATGA-------------------------------------------ATAACTCC------------ATAGTGATA--AGC--------ATTAAGC--- i oreNil3.chrLG6 C 0 C 0 s mayZeb1.JH720515 957340 37 + 7287419 ACA---TACATGA-------------------------------------------ATAACTCC------------ATAGTGATA--AGC--------ATTAAGC--- i mayZeb1.JH720515 C 0 C 0 s gasAcu1.chrXIX 7820729 40 - 20240660 ------TACAGCAGCTGAT-------------------------------------GCAACGCT------------GTGGTAAGA--GAA--------CTTCTGC--- i gasAcu1.chrXIX C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e melGal5.chr24 118646 3332 - 4088881 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e danRer11.chr5 65010222 1063 + 72500376 I e oryLat2.chr12 13635208 680 + 30041894 I e xenLae2.chr3S 90384317 718 - 120483113 I e petMar3.PIZI01000044v1 4872680 131 + 10753504 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-15714.000000 s galGal6.chrUn_NW_020110134v1 22962 3 + 23766 AGC----- s melGal5.chr24 121978 3 - 4088881 AGC----- i melGal5.chr24 I 3332 N 0 s nanPar1.KN906015v1 1472353 3 - 1999786 AGT----- i nanPar1.KN906015v1 C 0 C 0 s tetNig2.chr1 20480251 3 - 22981688 --TG---C i tetNig2.chr1 C 0 C 0 s fr3.chr14 5931832 6 - 12328026 --AGAACT i fr3.chr14 C 0 C 0 s oreNil3.chrLG6 16467786 3 - 44571662 --CC---T i oreNil3.chrLG6 C 0 C 0 s mayZeb1.JH720515 957377 3 + 7287419 --CC---T i mayZeb1.JH720515 C 0 C 0 s gasAcu1.chrXIX 7820769 4 - 20240660 --CCA--C i gasAcu1.chrXIX C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e danRer11.chr5 65010222 1063 + 72500376 I e oryLat2.chr12 13635208 680 + 30041894 I e mm10.chr1 185120491 0 + 195471971 C e xenLae2.chr3S 90384317 718 - 120483113 I e petMar3.PIZI01000044v1 4872680 131 + 10753504 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-29045.000000 s galGal6.chrUn_NW_020110134v1 22965 24 + 23766 CTGCTCCTGA------GTATGACTAT----TGCC------- s mm10.chr1 185120491 11 + 195471971 --GCTCTTG---------------------TGCC------- i mm10.chr1 C 0 C 0 s nanPar1.KN906015v1 1472356 27 - 1999786 ---CTTTCAACTTGGGGTTATACTAT----TGCC------- i nanPar1.KN906015v1 C 0 n 0 s tetNig2.chr1 20480254 24 - 22981688 -----------------TCCTTGTATGAAATGCCCTCAAGT i tetNig2.chr1 C 0 C 0 s fr3.chr14 5931838 22 - 12328026 -----------------TTCTTCTTAAAAAtacttt--att i fr3.chr14 C 0 C 0 s oreNil3.chrLG6 16467789 24 - 44571662 -----------------TTTGCCTCCAATATGTCATTAACC i oreNil3.chrLG6 C 0 C 0 s mayZeb1.JH720515 957380 24 + 7287419 -----------------TTTGCCTTCATTATGTCATAAACC i mayZeb1.JH720515 C 0 C 0 s gasAcu1.chrXIX 7820773 24 - 20240660 -----------------TTTGGATTCTGTGTTCCTGCAGCA i gasAcu1.chrXIX C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e danRer11.chr5 65010222 1063 + 72500376 I e oryLat2.chr12 13635208 680 + 30041894 I e xenLae2.chr3S 90384317 718 - 120483113 I e petMar3.PIZI01000044v1 4872680 131 + 10753504 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-422.000000 s galGal6.chrUn_NW_020110134v1 22989 17 + 23766 CCGATGTGCAGAAAAGC s mm10.chr1 185120502 13 + 195471971 C----ACACTGAAGATA i mm10.chr1 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr14 5931860 0 - 12328026 C e tetNig2.chr1 20480278 0 - 22981688 C e mayZeb1.JH720515 957404 0 + 7287419 C e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e oreNil3.chrLG6 16467813 0 - 44571662 C e danRer11.chr5 65010222 1063 + 72500376 I e oryLat2.chr12 13635208 680 + 30041894 I e gasAcu1.chrXIX 7820797 0 - 20240660 C e xenLae2.chr3S 90384317 718 - 120483113 I e petMar3.PIZI01000044v1 4872680 131 + 10753504 I e nanPar1.KN906015v1 1472383 0 - 1999786 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-9485.000000 s galGal6.chrUn_NW_020110134v1 23006 12 + 23766 CTGAGCTTTCCT- s mm10.chr1 185120515 12 + 195471971 CTGAGATTTCCT- i mm10.chr1 C 0 C 0 s tetNig2.chr1 20480278 9 - 22981688 ---TTAAATATT- i tetNig2.chr1 C 0 I 22 s fr3.chr14 5931860 9 - 12328026 ---ctttttctt- i fr3.chr14 C 0 I 37 s oreNil3.chrLG6 16467813 9 - 44571662 ---CAttttgac- i oreNil3.chrLG6 C 0 I 19 s mayZeb1.JH720515 957404 9 + 7287419 ---CATTTTGAC- i mayZeb1.JH720515 C 0 I 19 s gasAcu1.chrXIX 7820797 9 - 20240660 ---AAATTGCAC- i gasAcu1.chrXIX C 0 I 10 s petMar3.PIZI01000044v1 4872811 12 + 10753504 -TTGGTGTTAACG i petMar3.PIZI01000044v1 I 131 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e danRer11.chr5 65010222 1063 + 72500376 I e oryLat2.chr12 13635208 680 + 30041894 I e xenLae2.chr3S 90384317 718 - 120483113 I e nanPar1.KN906015v1 1472383 0 - 1999786 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-18511.000000 s galGal6.chrUn_NW_020110134v1 23018 21 + 23766 AGAAAAGCCAGTTTCCTGACT--------- s mm10.chr1 185120527 21 + 195471971 CAGAAAGCCAGTTTCCAGAGT--------- i mm10.chr1 C 0 C 0 s tetNig2.chr1 20480309 4 - 22981688 --------CACT------------------ i tetNig2.chr1 I 22 C 0 s fr3.chr14 5931906 8 - 12328026 -AGA---GTACG------------------ i fr3.chr14 I 37 C 0 s oreNil3.chrLG6 16467841 11 - 44571662 -AAACATGCACC------------------ i oreNil3.chrLG6 I 19 C 0 s mayZeb1.JH720515 957432 11 + 7287419 -AAACATGCACC------------------ i mayZeb1.JH720515 I 19 C 0 s oryLat2.chr12 13635888 11 + 30041894 -AGAAATTCAAG------------------ i oryLat2.chr12 I 680 C 0 s gasAcu1.chrXIX 7820816 11 - 20240660 -CAAGATGTACT------------------ i gasAcu1.chrXIX I 10 C 0 s petMar3.PIZI01000044v1 4872823 21 + 10753504 TGGAAATTCCGC---------GTTCTTTTT i petMar3.PIZI01000044v1 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e danRer11.chr5 65010222 1063 + 72500376 I e xenLae2.chr3S 90384317 718 - 120483113 I e nanPar1.KN906015v1 1472383 0 - 1999786 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=2213.000000 s galGal6.chrUn_NW_020110134v1 23039 4 + 23766 GGCT s mm10.chr1 185120548 4 + 195471971 GGCT i mm10.chr1 C 0 N 0 s nanPar1.KN906005v1 620276 4 + 2048838 GATT i nanPar1.KN906005v1 I 8566 C 0 s tetNig2.chr1 20480313 4 - 22981688 AATT i tetNig2.chr1 C 0 C 0 s fr3.chr14 5931914 4 - 12328026 GAAT i fr3.chr14 C 0 C 0 s oreNil3.chrLG6 16467852 4 - 44571662 GACT i oreNil3.chrLG6 C 0 C 0 s mayZeb1.JH720515 957443 4 + 7287419 GACT i mayZeb1.JH720515 C 0 C 0 s oryLat2.chr12 13635899 4 + 30041894 TATT i oryLat2.chr12 C 0 C 0 s gasAcu1.chrXIX 7820827 4 - 20240660 TCTT i gasAcu1.chrXIX C 0 C 0 s petMar3.PIZI01000044v1 4872844 4 + 10753504 GGCA i petMar3.PIZI01000044v1 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e danRer11.chr5 65010222 1063 + 72500376 I e xenLae2.chr3S 90384317 718 - 120483113 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-159.000000 s galGal6.chrUn_NW_020110134v1 23043 1 + 23766 G s nanPar1.KN906005v1 620280 1 + 2048838 G i nanPar1.KN906005v1 C 0 C 0 s tetNig2.chr1 20480317 1 - 22981688 A i tetNig2.chr1 C 0 I 3 s fr3.chr14 5931918 1 - 12328026 G i fr3.chr14 C 0 n 0 s oreNil3.chrLG6 16467856 1 - 44571662 C i oreNil3.chrLG6 C 0 I 7 s mayZeb1.JH720515 957447 1 + 7287419 A i mayZeb1.JH720515 C 0 I 24 s oryLat2.chr12 13635903 1 + 30041894 G i oryLat2.chr12 C 0 I 10 s gasAcu1.chrXIX 7820831 1 - 20240660 A i gasAcu1.chrXIX C 0 I 24 s petMar3.PIZI01000044v1 4872848 1 + 10753504 G i petMar3.PIZI01000044v1 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e danRer11.chr5 65010222 1063 + 72500376 I e xenLae2.chr3S 90384317 718 - 120483113 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-30859.000000 s galGal6.chrUn_NW_020110134v1 23044 31 + 23766 ----CAGCTCC---------CGTCTCATG------------ATTGCCATGATGCTG s nanPar1.KN906005v1 620281 26 + 2048838 ----CAGCCCT---------TCTCTCCGG------------ATTG-----AATTTG i nanPar1.KN906005v1 C 0 C 0 s tetNig2.chr1 20480321 16 - 22981688 ----CACTCTC---------CATATCTTC--------------------------- i tetNig2.chr1 I 3 C 0 s fr3.chr1 19578504 16 - 23260604 ----CACCCTC---------ACGTTCCCC--------------------------- i fr3.chr1 I 37 C 0 s mayZeb1.JH720515 957472 15 + 7287419 ----AACCTGT---------CTGTGCTG---------------------------- i mayZeb1.JH720515 I 24 n 24 s oryLat2.chr12 13635914 28 + 30041894 ----CACCCTG---------CATTGCATTTTCAGGGAAGtg--------------- i oryLat2.chr12 I 10 C 0 s gasAcu1.chrXIX 7820856 16 - 20240660 ----CCCTCAA---------AATAGCCAC--------------------------- i gasAcu1.chrXIX I 24 C 0 s petMar3.PIZI01000044v1 4872849 28 + 10753504 AGACCAGTCTCACCAAAGGACAATGTAT---------------------------- i petMar3.PIZI01000044v1 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e oreNil3.chrLG6 16467857 7 - 44571662 I e danRer11.chr5 65010222 1063 + 72500376 I e xenLae2.chr3S 90384317 718 - 120483113 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-18984.000000 s galGal6.chrUn_NW_020110134v1 23075 17 + 23766 CTGACTCGAGCA-----TGAAA---- s nanPar1.KN906005v1 620307 18 + 2048838 CTCACGGGTGCA----ATGAAA---- i nanPar1.KN906005v1 C 0 I 4 s tetNig2.chr1 20480337 5 - 22981688 -----------------TGCTG---- i tetNig2.chr1 C 0 I 1 s fr3.chr1 19578520 5 - 23260604 -----------------CTCTA---- i fr3.chr1 C 0 I 1 s oreNil3.chrLG6 16467864 10 - 44571662 CTCAC------------TTCAA---- i oreNil3.chrLG6 I 7 I 1 s oryLat2.chr12 13635942 3 + 30041894 -------------------caa---- i oryLat2.chr12 C 0 I 6 s gasAcu1.chrXIX 7820872 7 - 20240660 ---AT------------TTCAG---- i gasAcu1.chrXIX C 0 I 6 s petMar3.PIZI01000044v1 4872877 19 + 10753504 -------ATGGATTGTGTGCATGAGG i petMar3.PIZI01000044v1 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e mayZeb1.JH720515 957487 24 + 7287419 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e danRer11.chr5 65010222 1063 + 72500376 I e xenLae2.chr3S 90384317 718 - 120483113 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-1374.000000 s galGal6.chrUn_NW_020110134v1 23092 3 + 23766 ATG- s xenLae2.chr3S 90385035 3 - 120483113 ATG- i xenLae2.chr3S I 718 C 0 s nanPar1.KN906005v1 620329 3 + 2048838 TCA- i nanPar1.KN906005v1 I 4 C 0 s petMar3.PIZI01000044v1 4872896 4 + 10753504 GTAG i petMar3.PIZI01000044v1 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578525 1 - 23260604 I e tetNig2.chr1 20480342 1 - 22981688 I e mayZeb1.JH720515 957487 24 + 7287419 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 19096 1661 - 21249 I e oreNil3.chrLG6 16467874 1 - 44571662 I e danRer11.chr5 65010222 1063 + 72500376 I e oryLat2.chr12 13635945 6 + 30041894 I e gasAcu1.chrXIX 7820879 6 - 20240660 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-17704.000000 s galGal6.chrUn_NW_020110134v1 23095 18 + 23766 cgagaaagaagcaagcaa- s xenLae2.chr3S 90385038 18 - 120483113 CTAGGCACAAAACAACAA- i xenLae2.chr3S C 0 C 0 s nanPar1.KN906005v1 620332 17 + 2048838 TTGAGCAGAGGACGACA-- i nanPar1.KN906005v1 C 0 C 0 s fr3.chr1 19578526 6 - 23260604 ------------cattaa- i fr3.chr1 I 1 I 10 s oreNil3.chrLG6 16467875 6 - 44571662 ------------CTGCCA- i oreNil3.chrLG6 I 1 n 1 s oryLat2.chr12 13635951 12 + 30041894 ------aaaaaactaaaa- i oryLat2.chr12 I 6 I 15 s gasAcu1.chrXIX 7820885 12 - 20240660 ------GAAACGAAACAG- i gasAcu1.chrXIX I 6 n 6 s angJap1.KI313603 20757 16 - 21249 --CCAAAAGGGGGCACAA- i angJap1.KI313603 I 1661 I 2 s petMar3.PIZI01000044v1 4872900 18 + 10753504 -GGAGTGAAAGGCAGCGTG i petMar3.PIZI01000044v1 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e tetNig2.chr1 20480342 1 - 22981688 I e mayZeb1.JH720515 957487 24 + 7287419 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e danRer11.chr5 65010222 1063 + 72500376 I e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-69.000000 s galGal6.chrUn_NW_020110134v1 23113 1 + 23766 t s xenLae2.chr3S 90385056 1 - 120483113 G i xenLae2.chr3S C 0 C 0 s danRer11.chr5 65011285 1 + 72500376 T i danRer11.chr5 I 1063 C 0 s petMar3.PIZI01000044v1 4872918 1 + 10753504 T i petMar3.PIZI01000044v1 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578532 10 - 23260604 I e tetNig2.chr1 20480342 1 - 22981688 I e mayZeb1.JH720515 957487 24 + 7287419 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e angJap1.KI313603 20773 2 - 21249 I e oreNil3.chrLG6 16467881 1 - 44571662 I e oryLat2.chr12 13635963 15 + 30041894 I e gasAcu1.chrXIX 7820897 6 - 20240660 I e nanPar1.KN906005v1 620349 0 + 2048838 C e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=-4196.000000 s galGal6.chrUn_NW_020110134v1 23114 8 + 23766 ---cTTACTCC s xenLae2.chr3S 90385057 8 - 120483113 ---TTTACAGG i xenLae2.chr3S C 0 C 0 s angJap1.KI313603 20775 6 - 21249 -----TCACAT i angJap1.KI313603 I 2 C 0 s danRer11.chr5 65011286 8 + 72500376 ---CTTCCTCT i danRer11.chr5 C 0 C 0 s petMar3.PIZI01000044v1 4872919 8 + 10753504 AGGACTCC--- i petMar3.PIZI01000044v1 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578532 10 - 23260604 I e tetNig2.chr1 20480342 1 - 22981688 I e mayZeb1.JH720515 957487 24 + 7287419 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e oreNil3.chrLG6 16467881 1 - 44571662 I e oryLat2.chr12 13635963 15 + 30041894 I e gasAcu1.chrXIX 7820897 6 - 20240660 I e nanPar1.KN906005v1 620349 0 + 2048838 C e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=700.000000 s galGal6.chrUn_NW_020110134v1 23122 1 + 23766 A s xenLae2.chr3S 90385065 1 - 120483113 A i xenLae2.chr3S C 0 C 0 s oreNil3.chrLG13 8554877 1 + 32337344 a i oreNil3.chrLG13 I 55 C 0 s mayZeb1.AGTA02068962 1884 1 - 6537 A i mayZeb1.AGTA02068962 I 50 C 0 s oryLat2.chr12 13635978 1 + 30041894 a i oryLat2.chr12 I 15 C 0 s angJap1.KI313603 20781 1 - 21249 G i angJap1.KI313603 C 0 C 0 s danRer11.chr5 65011294 1 + 72500376 G i danRer11.chr5 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e fr3.chr1 19578532 10 - 23260604 I e tetNig2.chr1 20480342 1 - 22981688 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e gasAcu1.chrXIX 7820897 6 - 20240660 I e petMar3.PIZI01000044v1 4872927 0 + 10753504 C e nanPar1.KN906005v1 620349 0 + 2048838 C e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=2139.000000 s galGal6.chrUn_NW_020110134v1 23123 4 + 23766 CAAT s xenLae2.chr3S 90385066 4 - 120483113 CAAA i xenLae2.chr3S C 0 I 3 s tetNig2.chr1 20480343 1 - 22981688 ---A i tetNig2.chr1 I 1 C 0 s fr3.chr1 19578542 2 - 23260604 --ag i fr3.chr1 I 10 C 0 s oreNil3.chrLG13 8554878 4 + 32337344 caga i oreNil3.chrLG13 C 0 C 0 s mayZeb1.AGTA02068962 1885 4 - 6537 CAGG i mayZeb1.AGTA02068962 C 0 C 0 s oryLat2.chr12 13635979 4 + 30041894 cAAA i oryLat2.chr12 C 0 C 0 s gasAcu1.chrVI 7070056 4 - 17083675 CAGA i gasAcu1.chrVI I 73 C 0 s angJap1.KI313603 20782 4 - 21249 AAAG i angJap1.KI313603 C 0 C 0 s danRer11.chr5 65011295 4 + 72500376 CAAC i danRer11.chr5 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e letCam1.KE993907 798359 582 - 874331 I e petMar3.PIZI01000044v1 4872927 0 + 10753504 C e nanPar1.KN906005v1 620349 0 + 2048838 C e xenTro9.chr3 25438498 2814 - 137218701 I e hg38.chr2 172372847 1336 - 242193529 I a score=1237.000000 s galGal6.chrUn_NW_020110134v1 23127 1 + 23766 C s hg38.chr2 172374183 1 - 242193529 C i hg38.chr2 I 1336 C 0 s tetNig2.chr1 20480344 1 - 22981688 C i tetNig2.chr1 C 0 C 0 s fr3.chr1 19578544 1 - 23260604 c i fr3.chr1 C 0 C 0 s oreNil3.chrLG13 8554882 1 + 32337344 C i oreNil3.chrLG13 C 0 C 0 s mayZeb1.AGTA02068962 1889 1 - 6537 C i mayZeb1.AGTA02068962 C 0 C 0 s oryLat2.chr12 13635983 1 + 30041894 C i oryLat2.chr12 C 0 C 0 s gasAcu1.chrVI 7070060 1 - 17083675 T i gasAcu1.chrVI C 0 C 0 s angJap1.KI313603 20786 1 - 21249 A i angJap1.KI313603 C 0 C 0 s danRer11.chr5 65011299 1 + 72500376 T i danRer11.chr5 C 0 C 0 s letCam1.KE993907 798941 1 - 874331 C i letCam1.KE993907 I 582 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e pytBiv1.KE959146 41099 443 - 65961 I e thaSir1.NW_013658704v1 449886 1182 + 513332 I e xenLae2.chr3S 90385070 3 - 120483113 I e petMar3.PIZI01000044v1 4872927 0 + 10753504 C e nanPar1.KN906005v1 620349 0 + 2048838 C e xenTro9.chr3 25438498 2814 - 137218701 I a score=-567.000000 s galGal6.chrUn_NW_020110134v1 23128 1 + 23766 T s pytBiv1.KE959146 41542 1 - 65961 T i pytBiv1.KE959146 I 443 C 0 s thaSir1.NW_013658704v1 451068 1 + 513332 T i thaSir1.NW_013658704v1 I 1182 C 0 s hg38.chr2 172374184 1 - 242193529 C i hg38.chr2 C 0 C 0 s tetNig2.chr1 20480345 1 - 22981688 G i tetNig2.chr1 C 0 C 0 s fr3.chr1 19578545 1 - 23260604 a i fr3.chr1 C 0 C 0 s oreNil3.chrLG13 8554883 1 + 32337344 T i oreNil3.chrLG13 C 0 C 0 s mayZeb1.AGTA02068962 1890 1 - 6537 T i mayZeb1.AGTA02068962 C 0 C 0 s oryLat2.chr12 13635984 1 + 30041894 A i oryLat2.chr12 C 0 C 0 s gasAcu1.chrVI 7070061 1 - 17083675 T i gasAcu1.chrVI C 0 C 0 s angJap1.KI313603 20787 1 - 21249 T i angJap1.KI313603 C 0 C 0 s danRer11.chr5 65011300 1 + 72500376 T i danRer11.chr5 C 0 C 0 s letCam1.KE993907 798942 1 - 874331 T i letCam1.KE993907 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e xenLae2.chr3S 90385070 3 - 120483113 I e petMar3.PIZI01000044v1 4872927 0 + 10753504 C e nanPar1.KN906005v1 620349 0 + 2048838 C e xenTro9.chr3 25438498 2814 - 137218701 I a score=-5653.000000 s galGal6.chrUn_NW_020110134v1 23129 1 + 23766 -G s pytBiv1.KE959146 41543 1 - 65961 -G i pytBiv1.KE959146 C 0 C 0 s thaSir1.NW_013658704v1 451069 1 + 513332 -A i thaSir1.NW_013658704v1 C 0 C 0 s hg38.chr2 172374185 1 - 242193529 -A i hg38.chr2 C 0 C 0 s xenTro9.chr3 25441312 1 - 137218701 -G i xenTro9.chr3 I 2814 C 0 s xenLae2.chr3S 90385073 1 - 120483113 -A i xenLae2.chr3S I 3 C 0 s nanPar1.KN906005v1 620349 1 + 2048838 -A i nanPar1.KN906005v1 C 0 C 0 s tetNig2.chr1 20480346 1 - 22981688 -T i tetNig2.chr1 C 0 I 1 s fr3.chr1 19578546 1 - 23260604 -g i fr3.chr1 C 0 I 1 s oreNil3.chrLG13 8554884 1 + 32337344 -G i oreNil3.chrLG13 C 0 I 1 s mayZeb1.AGTA02068962 1891 1 - 6537 -G i mayZeb1.AGTA02068962 C 0 I 1 s gasAcu1.chrVI 7070062 1 - 17083675 -A i gasAcu1.chrVI C 0 C 0 s angJap1.KI313603 20788 1 - 21249 -A i angJap1.KI313603 C 0 I 1 s letCam1.KE993907 798943 1 - 874331 C- i letCam1.KE993907 C 0 C 0 e anoCar2.chrUn_AAWZ02038318 8349 940 + 12106 I e danRer11.chr5 65011301 0 + 72500376 C e oryLat2.chr12 13635985 0 + 30041894 C e petMar3.PIZI01000044v1 4872927 0 + 10753504 C a score=442061.000000 s galGal6.chrUn_NW_020110134v1 23130 79 + 23766 TTTACCTTCATGGATTTATACAGTCTTTCAGCAAAGTACGCAGGCTTGTTTCACACACACTTTACT-----GTAAGGAGAGACA--- s pytBiv1.KE959146 41544 79 - 65961 TTTACCTTCATAGATTTGTACAGCCGTTCAGCAAAGTAGGCAGACTTATTTCTCATGCACTTCACT-----GGGAGGAGAGGAG--- i pytBiv1.KE959146 C 0 C 0 s thaSir1.NW_013658704v1 451070 79 + 513332 CTCACCTTCATTGCTTTGAACAATCTTTCAGCAAAATACTCAGCCGTACTCCTGATATTTTTCACT-----GTGGAAAGAACAT--- i thaSir1.NW_013658704v1 C 0 C 0 s anoCar2.chrUn_AAWZ02038318 9289 79 + 12106 TTTACCTTCATGGATTTGTAGAGTCTTTCGGCAAAGTAGGCGGTCCTGCTCCGCATGCATTTGACT-----gtgggaagaaaag--- i anoCar2.chrUn_AAWZ02038318 I 940 C 0 s hg38.chr2 172374186 79 - 242193529 TTTACCTTCATCGATTTATAGAGCTTTTCAGCAAAATATGCAGATTTGTTCCTCATGCACTTTACT-----GTCAaagaaaaaa--- i hg38.chr2 C 0 C 0 s xenTro9.chr3 25441313 79 - 137218701 CTCACCTTCATAGATTTGTACAACCGTTCTGCAAAATAGCCTGGCCTACTCCTCAAGCATTTCACT-----GCAAGGCAAAGAG--- i xenTro9.chr3 C 0 C 0 s xenLae2.chr3S 90385074 79 - 120483113 CTCACCTTCATAGATTTATACAGCCGTTCTGCAAAGTAGGCTGGTCTGCTCTTTATGCATTTCACT-----GCAAGGCAAAGAG--- i xenLae2.chr3S C 0 C 0 s nanPar1.KN906005v1 620350 77 + 2048838 CTCACCTTCATGGATTTATACAATCGTTCAGCAAAGTAACCGGGTTTGCTCCTTGTAcatttcact-----ggaag--aaaaaa--- i nanPar1.KN906005v1 C 0 C 0 s tetNig2.chr1 20480348 72 - 22981688 TTTACCTTCATTGACTTGTAAAGGCGTTTGGCAAAGAACATGGGAACACTCCTTATGCACTGAACT-----GT-----GTAT----- i tetNig2.chr1 I 1 I 2 s fr3.chr1 19578548 74 - 23260604 CGTACCTTCATGGCCTTGTGAAGCCGCTCTGCAAAGTAGGTCGGGGTGTCTCTGATGCATTTCACT-----GG-----ggacag--- i fr3.chr1 I 1 I 4 s oreNil3.chrLG13 8554886 73 + 32337344 CTCACCTTCATGGCTTTGTAGAGTCTTTCAGCAAAATATgcaggtgtgtttttaatgcacttcact-----a------aaacag--- i oreNil3.chrLG13 I 1 I 4 s mayZeb1.AGTA02068962 1893 73 - 6537 CTCACCTTCATGGCCTTGTAGAGTCTTTCAGCAAAATATGCAggtgtatttttaatgcacttcact-----a------aaacag--- i mayZeb1.AGTA02068962 I 1 I 3 s oryLat2.chr12 13635985 75 + 30041894 CTCACCTTCATGGATTTATATAATCGCTCTGCAAAAAACGCTGGCTTGCTCCTCAGGCATTTCACT-----GTA----GAGCAG--- i oryLat2.chr12 C 0 I 19 s gasAcu1.chrVI 7070063 73 - 17083675 CTCACCTTCATGGCTTTGTAAAGTCTCTCAGCAAAATAGGCAGGTGTGTTCTTAATACACTTTACT-----G------GAAAAG--- i gasAcu1.chrVI C 0 N 0 s angJap1.KI313603 20790 78 - 21249 CCTACCTTCATGGACTTATACAGCCTCTCAGCAAAGAAAGCAGGCTTATTTCTAATGCACTTCACTGTGGAA------CAACAC--- i angJap1.KI313603 I 1 N 0 s danRer11.chr5 65011301 71 + 72500376 --TACCTTCATAGCATGTTGGAGCTTTTCCGCAAAGTAGGCAGGTTTATTCCAAGCAGCCTTCACT-----A------AAACAT--- i danRer11.chr5 C 0 I 3 s petMar3.PIZI01000044v1 4872927 81 + 10753504 -TCACCTTCATAGATTTATAGAGGCTCTCGGCAAAGAAAGCAGGCTTGTTTTTCACGCACTTCACT-----ATGGTTGGGACAAACA i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 798944 82 - 874331 CTCACCTTCATAGATTTATAGAGGCTCTCGGCAAAGAAAGCAGGCTTGTTTTTCACGCACTTCACT-----GTGGTGAGGACAAACA i letCam1.KE993907 C 0 C 0 a score=-23278.000000 s galGal6.chrUn_NW_020110134v1 23209 4 + 23766 AGAA-------- s pytBiv1.KE959146 41623 4 - 65961 AATA-------- i pytBiv1.KE959146 C 0 C 0 s thaSir1.NW_013658704v1 451149 4 + 513332 TGGG-------- i thaSir1.NW_013658704v1 C 0 C 0 s anoCar2.chrUn_AAWZ02038318 9368 4 + 12106 gaga-------- i anoCar2.chrUn_AAWZ02038318 C 0 C 0 s hg38.chr2 172374265 4 - 242193529 aaag-------- i hg38.chr2 C 0 C 0 s xenTro9.chr3 25441392 4 - 137218701 ACAG-------- i xenTro9.chr3 C 0 N 0 s xenLae2.chr3S 90385153 4 - 120483113 TCAG-------- i xenLae2.chr3S C 0 N 0 s nanPar1.KN906005v1 620427 4 + 2048838 tTCA-------- i nanPar1.KN906005v1 C 0 I 11 s tetNig2.chr1 20480422 4 - 22981688 AGAG-------- i tetNig2.chr1 I 2 I 1 s fr3.chr1 19578626 4 - 23260604 aaaa-------- i fr3.chr1 I 4 I 1 s oreNil3.chrLG13 8554963 4 + 32337344 aaac-------- i oreNil3.chrLG13 I 4 I 1 s mayZeb1.AGTA02068962 1969 4 - 6537 aaac-------- i mayZeb1.AGTA02068962 I 3 I 1 s oryLat2.chr12 13636079 4 + 30041894 AATA-------- i oryLat2.chr12 I 19 I 1 s gasAcu1.chrIV 19252861 2 - 32632948 --AA-------- i gasAcu1.chrIV N 0 I 1 s danRer11.chr5 65011375 4 + 72500376 AGAG-------- i danRer11.chr5 I 3 I 1 s petMar3.PIZI01000044v1 4873008 10 + 10753504 --AACCCATTAA i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799026 10 - 874331 --AACCCATCAA i letCam1.KE993907 C 0 C 0 a score=-85787.000000 s galGal6.chrUn_NW_020110134v1 23213 25 + 23766 -CAAGA-----gaatt--aa-------ggtcaga-------aaagca---- s pytBiv1.KE959146 41627 23 - 65961 -AAGGA-----AGGTC-----------AGTTAGC-------ATAGCA---- i pytBiv1.KE959146 C 0 C 0 s thaSir1.NW_013658704v1 451153 32 + 513332 -AAAGAGTTTTAGGTCTGTA-------GGTCAAA-------AATGCA---- i thaSir1.NW_013658704v1 C 0 N 0 s anoCar2.chrUn_AAWZ02038318 9372 24 + 12106 -aaaag-----aagcc---g-------AATTAGC-------AACGGA---- i anoCar2.chrUn_AAWZ02038318 C 0 C 0 s hg38.chr2 172374269 25 - 242193529 -aagaa-----atgaa--aa-------gattaca-------gataag---- i hg38.chr2 C 0 I 12 s nanPar1.KN906005v1 620442 31 + 2048838 -AAGGG-----AATTC---A-------GACTAAACAGCTCTAATGTA---- i nanPar1.KN906005v1 I 11 C 0 s tetNig2.chr1 20480427 21 - 22981688 -AAATA-----AATCT--TC-------GGTTAAG-------CA-------- i tetNig2.chr1 I 1 C 0 s fr3.chr1 19578631 21 - 23260604 -aaaga-----gagtt--GG-------ACTCAAA-------TA-------- i fr3.chr1 I 1 C 0 s oreNil3.chrLG13 8554968 21 + 32337344 -aAGTC-----ATTAC--CA-------AGACAAC-------AA-------- i oreNil3.chrLG13 I 1 C 0 s mayZeb1.AGTA02068962 1974 21 - 6537 -aagTC-----ATTAC--CA-------AGACAAC-------AA-------- i mayZeb1.AGTA02068962 I 1 C 0 s oryLat2.chr12 13636084 28 + 30041894 -AAGTT-----CATCT--CATCTggacagacaaa-------ca-------- i oryLat2.chr12 I 1 C 0 s gasAcu1.chrIV 19252864 21 - 32632948 -AAGAC-----GGCCT--TG-------TGTTAGA-------CT-------- i gasAcu1.chrIV I 1 C 0 s danRer11.chr5 65011380 21 + 72500376 -GATTA-----AACTG--TT-------GGGAATG-------CA-------- i danRer11.chr5 I 1 C 0 s petMar3.PIZI01000044v1 4873018 30 + 10753504 CGAGAC-----ACATC--TA-------CAACAAC-------AAGAGAAGCA i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799036 30 - 874331 CGAGAC-----ACATC--TA-------CAACAAC-------AAGAGAAGCA i letCam1.KE993907 C 0 C 0 a score=-16309.000000 s galGal6.chrUn_NW_020110134v1 23238 5 + 23766 gGAGG s pytBiv1.KE959146 41650 5 - 65961 ACAAA i pytBiv1.KE959146 C 0 C 0 s anoCar2.chrUn_AAWZ02038318 9396 4 + 12106 -TAAG i anoCar2.chrUn_AAWZ02038318 C 0 C 0 s hg38.chr2 172374306 5 - 242193529 agaaa i hg38.chr2 I 12 C 0 s nanPar1.KN906005v1 620473 5 + 2048838 AGAGG i nanPar1.KN906005v1 C 0 N 0 s tetNig2.chr1 20480448 4 - 22981688 -GACA i tetNig2.chr1 C 0 I 1 s fr3.chr1 19578652 4 - 23260604 -TGAT i fr3.chr1 C 0 I 1 s oreNil3.chrLG13 8554989 4 + 32337344 -CAAT i oreNil3.chrLG13 C 0 I 1 s mayZeb1.AGTA02068962 1995 4 - 6537 -CAAT i mayZeb1.AGTA02068962 C 0 I 1 s oryLat2.chr12 13636112 4 + 30041894 -aaac i oryLat2.chr12 C 0 I 1 s gasAcu1.chrIV 19252885 4 - 32632948 -GACC i gasAcu1.chrIV C 0 I 1 s danRer11.chr5 65011401 4 + 72500376 -GTTT i danRer11.chr5 C 0 I 1 s petMar3.PIZI01000044v1 4873048 3 + 10753504 ACA-- i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799066 3 - 874331 AGA-- i letCam1.KE993907 C 0 C 0 a score=-15640.000000 s galGal6.chrUn_NW_020110134v1 23243 3 + 23766 TTT- s pytBiv1.KE959146 41655 3 - 65961 CAT- i pytBiv1.KE959146 C 0 C 0 s anoCar2.chrUn_AAWZ02038318 9400 3 + 12106 CCC- i anoCar2.chrUn_AAWZ02038318 C 0 C 0 s hg38.chr2 172374311 3 - 242193529 AGT- i hg38.chr2 C 0 C 0 s tetNig2.chr1 20480453 1 - 22981688 --T- i tetNig2.chr1 I 1 N 0 s fr3.chr1 19578657 1 - 23260604 --t- i fr3.chr1 I 1 I 2 s oreNil3.chrLG13 8554994 1 + 32337344 --T- i oreNil3.chrLG13 I 1 I 4 s mayZeb1.AGTA02068962 2000 1 - 6537 --T- i mayZeb1.AGTA02068962 I 1 I 4 s oryLat2.chr12 13636117 1 + 30041894 --t- i oryLat2.chr12 I 1 I 4 s gasAcu1.chrIV 19252890 1 - 32632948 --C- i gasAcu1.chrIV I 1 C 0 s danRer11.chr5 65011406 1 + 72500376 --T- i danRer11.chr5 I 1 I 8 s petMar3.PIZI01000044v1 4873051 3 + 10753504 -CCA i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799069 3 - 874331 -CCA i letCam1.KE993907 C 0 C 0 a score=-7043.000000 s galGal6.chrUn_NW_020110134v1 23246 2 + 23766 TC- s pytBiv1.KE959146 41658 2 - 65961 Tc- i pytBiv1.KE959146 C 0 N 0 s anoCar2.chrUn_AAWZ02038318 9403 2 + 12106 GT- i anoCar2.chrUn_AAWZ02038318 C 0 I 1 s hg38.chr2 172374314 2 - 242193529 GA- i hg38.chr2 C 0 C 0 s fr3.chr1 19578660 2 - 23260604 tc- i fr3.chr1 I 2 C 0 s oreNil3.chrLG13 8554999 1 + 32337344 -T- i oreNil3.chrLG13 I 4 C 0 s mayZeb1.AGTA02068962 2005 1 - 6537 -T- i mayZeb1.AGTA02068962 I 4 C 0 s petMar3.PIZI01000044v1 4873054 2 + 10753504 -TG i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799072 2 - 874331 -TG i letCam1.KE993907 C 0 C 0 e danRer11.chr5 65011407 8 + 72500376 I e oryLat2.chr12 13636118 4 + 30041894 I e gasAcu1.chrIV 19252891 0 - 32632948 C a score=1221.000000 s galGal6.chrUn_NW_020110134v1 23248 1 + 23766 C s anoCar2.chrUn_AAWZ02038318 9406 1 + 12106 C i anoCar2.chrUn_AAWZ02038318 I 1 C 0 s fr3.chr1 19578662 1 - 23260604 t i fr3.chr1 C 0 I 2 s oreNil3.chrLG13 8555000 1 + 32337344 T i oreNil3.chrLG13 C 0 N 0 s mayZeb1.AGTA02068962 2006 1 - 6537 T i mayZeb1.AGTA02068962 C 0 N 0 s oryLat2.chr12 13636122 1 + 30041894 t i oryLat2.chr12 I 4 I 4 s gasAcu1.chrIV 19252891 1 - 32632948 T i gasAcu1.chrIV C 0 I 4 s danRer11.chr5 65011415 1 + 72500376 T i danRer11.chr5 I 8 I 2 s petMar3.PIZI01000044v1 4873056 1 + 10753504 C i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799074 1 - 874331 C i letCam1.KE993907 C 0 C 0 e hg38.chr2 172374316 0 - 242193529 C a score=1772.000000 s galGal6.chrUn_NW_020110134v1 23249 2 + 23766 AC s anoCar2.chrUn_AAWZ02038318 9407 2 + 12106 AC i anoCar2.chrUn_AAWZ02038318 C 0 C 0 s hg38.chr2 172374316 1 - 242193529 -C i hg38.chr2 C 0 C 0 s danRer11.chr5 65011418 2 + 72500376 AC i danRer11.chr5 I 2 C 0 s petMar3.PIZI01000044v1 4873057 2 + 10753504 GC i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799075 2 - 874331 AC i letCam1.KE993907 C 0 C 0 e fr3.chr1 19578663 2 - 23260604 I e oryLat2.chr12 13636123 4 + 30041894 I e gasAcu1.chrIV 19252892 4 - 32632948 I a score=-39419.000000 s galGal6.chrUn_NW_020110134v1 23251 25 + 23766 ATC-----------------GCTGTGCAGCACTTTCACGGtg s anoCar2.chrUn_AAWZ02038318 9409 39 + 12106 ACTTTGGAATCAAccc---ggtttggcaccactttcactgcg i anoCar2.chrUn_AAWZ02038318 C 0 N 0 s hg38.chr2 172374317 25 - 242193529 AGT-----------------TGTTTCCTCTGTTTCTACAAGG i hg38.chr2 C 0 I 2 s fr3.chr1 19578665 15 - 23260604 ---------------------------ttttctttagaGCTT i fr3.chr1 I 2 C 0 s oryLat2.chr12 13636127 16 + 30041894 --------------------------AGTGAGGTGAATGCAC i oryLat2.chr12 I 4 C 0 s gasAcu1.chrIV 19252896 24 - 32632948 -AT-----------------CCCACGCGTTGCTTTAACACGC i gasAcu1.chrIV I 4 C 0 s danRer11.chr5 65011420 23 + 72500376 --C-----------------ATTACATTTCTTTTTTACGCTG i danRer11.chr5 C 0 C 0 s petMar3.PIZI01000044v1 4873059 24 + 10753504 ------------ATGCATGGATTATATAACACTTTG------ i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799077 24 - 874331 ------------ATGCATGGATTATAGAACACTTTG------ i letCam1.KE993907 C 0 C 0 a score=-9385.000000 s galGal6.chrUn_NW_020110134v1 23276 9 + 23766 cagctgttt-- s hg38.chr2 172374344 9 - 242193529 TCAATATTT-- i hg38.chr2 I 2 C 0 s fr3.chr1 19578680 5 - 23260604 ----TATCC-- i fr3.chr1 C 0 I 8 s oryLat2.chr12 13636143 5 + 30041894 ----AATTC-- i oryLat2.chr12 C 0 I 8 s gasAcu1.chrIV 19252920 5 - 32632948 ----GGTAG-- i gasAcu1.chrIV C 0 I 8 s danRer11.chr5 65011443 5 + 72500376 ----TATCT-- i danRer11.chr5 C 0 N 0 s petMar3.PIZI01000044v1 4873083 10 + 10753504 -CAACATGTGT i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799101 10 - 874331 -CAACATGTGT i letCam1.KE993907 C 0 C 0 a score=-2719.000000 s galGal6.chrUn_NW_020110134v1 23285 3 + 23766 ctt- s hg38.chr2 172374353 3 - 242193529 GCT- i hg38.chr2 C 0 C 0 s fr3.chr1 19578693 3 - 23260604 TTT- i fr3.chr1 I 8 I 9 s oryLat2.chr12 13636156 3 + 30041894 TTT- i oryLat2.chr12 I 8 N 0 s gasAcu1.chrIV 19252933 3 - 32632948 GTT- i gasAcu1.chrIV I 8 I 2 s petMar3.PIZI01000044v1 4873093 3 + 10753504 -TCG i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799111 3 - 874331 -TTG i letCam1.KE993907 C 0 C 0 a score=-1735.000000 s galGal6.chrUn_NW_020110134v1 23288 28 + 23766 ctgtcaagATGCAACTCCAGGCAAGCAA s hg38.chr2 172374356 26 - 242193529 TTGCCAGG--GAAATTTTAGCCAAGCAA i hg38.chr2 C 0 N 0 s fr3.chr1 19578705 27 - 23260604 GTGCCGAAGTCTATCG-CAGCTACATAT i fr3.chr1 I 9 C 0 s gasAcu1.chrIV 19252938 28 - 32632948 TTACCAACAGCCAGCATCAGCCTCTCAA i gasAcu1.chrIV I 2 C 0 s petMar3.PIZI01000044v1 4873096 18 + 10753504 ----------TCATTAGCAGGTATTTAA i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799114 18 - 874331 ----------TCATTAGCAGGTATTTAA i letCam1.KE993907 C 0 C 0 a score=-2640.000000 s galGal6.chrUn_NW_020110134v1 23316 1 + 23766 -A s fr3.chr1 19578732 1 - 23260604 -G i fr3.chr1 C 0 I 6 s gasAcu1.chrIV 19252966 1 - 32632948 -A i gasAcu1.chrIV C 0 N 0 s petMar3.PIZI01000044v1 4873114 1 + 10753504 T- i petMar3.PIZI01000044v1 C 0 C 0 s letCam1.KE993907 799132 1 - 874331 T- i letCam1.KE993907 C 0 C 0 a score=-6328.000000 s galGal6.chrUn_NW_020110134v1 23317 31 + 23766 CAGCAGGTGCAGTGCAGGCAT----------------------CCACAGTCAG s fr3.chr1 19578739 26 - 23260604 GGTAGGGCTCATTCCAGGGCC----------------------CTAGA----- i fr3.chr1 I 6 C 0 s petMar3.PIZI01000044v1 4873115 45 + 10753504 CAGCAGTTATA--ACAGTTACACTAGCGCCAGGCATGCAGGAAGTAG------ i petMar3.PIZI01000044v1 C 0 N 0 s letCam1.KE993907 799133 25 - 874331 CAGCAGTCGTA--ACAGTTAC--------------------GCTTAG------ i letCam1.KE993907 C 0 I 4 a score=-3637.000000 s galGal6.chrUn_NW_020110134v1 23348 103 + 23766 TGACACGCTGGGAGCTGACGTCTCTGTGCCTGGTGCACAGCAGTATTTGCGGGAAGGCTTCCATG--CCTCCTGACAGCAAACCTCTGC-----TACCAAAGCATCCTTT---- s fr3.chr1 19578765 93 - 23260604 TGAACATTTAGGGGTTCGTTACTTTGCTCATGG-GTACcatggcagtgctctgaaggtgtcctgggaCCTC-----------cctctac-----taccagaacaccttct---- i fr3.chr1 C 0 N 0 s letCam1.KE993907 799162 83 - 874331 -AGGCATGCAGGAAGTAGTATGTCTGT-------AGGCCACGGT---------GAGGCCTCGGGG---CTC-----------GCTTAGCAGCTGTGCCAGAAAAGGCGTTCCGT i letCam1.KE993907 I 4 C 0 a score=130.000000 s galGal6.chrUn_NW_020110134v1 23451 35 + 23766 GGCCAAGCACGCTGTACTATAAAGCACAACACCTT s letCam1.KE993907 799245 35 - 874331 AGGCGGTAAGGCCAGGTAATAGAGGAGAGCCCTTT i letCam1.KE993907 C 0 N 0 a score=91.000000 s galGal6.chrUn_NW_020110134v1 23745 1 + 23766 A s mesUni1.KK809620 289 1 - 8120 A i mesUni1.KK809620 N 0 N 0