# Assembly name:  SpiSpi1_v1.hap1
# Organism name:  Spinachia spinachia (sea stickleback)
# Isolate:  SK-2024b
# Taxid:          206126
# BioSample:      SAMN36735485
# BioProject:     PRJNA1146010
# Submitter:      University of Copenhagen
# Date:           2025-02-27
# Assembly type:  haploid (haplotype 1)
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JBLUUC01
# Assembly method: Hifiasm v. 0.19; purge_dups v. 1.2.5; yahs v. 1.2a.1; samba v. 4.1.0
# Expected final version: yes
# Genome coverage: 58x
# Sequencing technology: HiFi; HiC
# RefSeq category: Reference Genome
# GenBank assembly accession: GCA_048126635.1
# Linked assembly: GCA_048127205.1 (haplotype 2)
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_048126645.1		Primary Assembly
## GCA_048126655.1		non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
chr1	assembled-molecule	1	Chromosome	CM106587.1	<>	na	Primary Assembly	35838203	na
chr2	assembled-molecule	2	Chromosome	CM106588.1	<>	na	Primary Assembly	30536166	na
chr3	assembled-molecule	3	Chromosome	CM106589.1	<>	na	Primary Assembly	28013330	na
chr4	assembled-molecule	4	Chromosome	CM106590.1	<>	na	Primary Assembly	27159969	na
chr5	assembled-molecule	5	Chromosome	CM106591.1	<>	na	Primary Assembly	22780565	na
chr6	assembled-molecule	6	Chromosome	CM106592.1	<>	na	Primary Assembly	20438143	na
chr7	assembled-molecule	7	Chromosome	CM106593.1	<>	na	Primary Assembly	20223383	na
chr8	assembled-molecule	8	Chromosome	CM106594.1	<>	na	Primary Assembly	19449660	na
chr9	assembled-molecule	9	Chromosome	CM106595.1	<>	na	Primary Assembly	19262566	na
chr10	assembled-molecule	10	Chromosome	CM106596.1	<>	na	Primary Assembly	18717046	na
chr11	assembled-molecule	11	Chromosome	CM106597.1	<>	na	Primary Assembly	18500370	na
chr12	assembled-molecule	12	Chromosome	CM106598.1	<>	na	Primary Assembly	18083112	na
chr13	assembled-molecule	13	Chromosome	CM106599.1	<>	na	Primary Assembly	17925536	na
chr14	assembled-molecule	14	Chromosome	CM106600.1	<>	na	Primary Assembly	17403199	na
chr15	assembled-molecule	15	Chromosome	CM106601.1	<>	na	Primary Assembly	16123721	na
chr16	assembled-molecule	16	Chromosome	CM106602.1	<>	na	Primary Assembly	15740488	na
chr17	assembled-molecule	17	Chromosome	CM106603.1	<>	na	Primary Assembly	15188090	na
chr18	assembled-molecule	18	Chromosome	CM106604.1	<>	na	Primary Assembly	14973668	na
chr19	assembled-molecule	19	Chromosome	CM106605.1	<>	na	Primary Assembly	14966635	na
chr20	assembled-molecule	20	Chromosome	CM106606.1	<>	na	Primary Assembly	14709901	na
scaffold_30	unplaced-scaffold	na	na	JBLUUC010000001.1	<>	na	Primary Assembly	65877	na
scaffold_23	unplaced-scaffold	na	na	JBLUUC010000002.1	<>	na	Primary Assembly	137257	na
scaffold_24	unplaced-scaffold	na	na	JBLUUC010000004.1	<>	na	Primary Assembly	125000	na
scaffold_31	unplaced-scaffold	na	na	JBLUUC010000005.1	<>	na	Primary Assembly	61013	na
scaffold_32	unplaced-scaffold	na	na	JBLUUC010000006.1	<>	na	Primary Assembly	54503	na
scaffold_25	unplaced-scaffold	na	na	JBLUUC010000009.1	<>	na	Primary Assembly	123700	na
scaffold_26	unplaced-scaffold	na	na	JBLUUC010000016.1	<>	na	Primary Assembly	99151	na
scaffold_37	unplaced-scaffold	na	na	JBLUUC010000020.1	<>	na	Primary Assembly	25087	na
scaffold_27	unplaced-scaffold	na	na	JBLUUC010000021.1	<>	na	Primary Assembly	97023	na
scaffold_36	unplaced-scaffold	na	na	JBLUUC010000025.1	<>	na	Primary Assembly	31319	na
scaffold_29	unplaced-scaffold	na	na	JBLUUC010000026.1	<>	na	Primary Assembly	75000	na
scaffold_28	unplaced-scaffold	na	na	JBLUUC010000028.1	<>	na	Primary Assembly	76203	na
scaffold_35	unplaced-scaffold	na	na	JBLUUC010000031.1	<>	na	Primary Assembly	37618	na
scaffold_22	unplaced-scaffold	na	na	JBLUUC010000033.1	<>	na	Primary Assembly	190720	na
scaffold_21	unplaced-scaffold	na	na	JBLUUC010000034.1	<>	na	Primary Assembly	216000	na
scaffold_34	unplaced-scaffold	na	na	JBLUUC010000035.1	<>	na	Primary Assembly	42533	na
scaffold_33	unplaced-scaffold	na	na	JBLUUC010000036.1	<>	na	Primary Assembly	50000	na
mtDNA	assembled-molecule	MT	Mitochondrion	CM106668.1	<>	na	non-nuclear	19352	na