hub GCF_010993605.1 genome assembly
shortLabel sea lamprey (primary hap 2020)
longLabel sea lamprey (primary hap 2020)/Petromyzon marinus/GCF_010993605.1_kPetMar1.pri genome assembly
useOneFile on
email hclawson@ucsc.edu
descriptionUrl html/GCF_010993605.1_kPetMar1.pri.description.html

genome GCF_010993605.1
taxId 7757
groups groups.txt
description sea lamprey (primary hap 2020)
twoBitPath GCF_010993605.1.2bit
twoBitBptUrl GCF_010993605.1.2bit.bpt
chromSizes GCF_010993605.1.chrom.sizes.txt
chromAliasBb GCF_010993605.1.chromAlias.bb
chromAuthority ucsc
organism kPetMar1.pri Feb. 2020
defaultPos NC_046069.1:11417781-11427781
scientificName Petromyzon marinus
htmlPath html/GCF_010993605.1_kPetMar1.pri.description.html
blat dynablat-01.soe.ucsc.edu 4040 dynamic GCF/010/993/605/GCF_010993605.1
transBlat dynablat-01.soe.ucsc.edu 4040 dynamic GCF/010/993/605/GCF_010993605.1
isPcr dynablat-01.soe.ucsc.edu 4040 dynamic GCF/010/993/605/GCF_010993605.1
liftOver.GCA_014621495.2 liftOver/GCF_010993605.1ToGCA_014621495.2.over.chain.gz
liftOver.GCF_000002035.6 liftOver/GCF_010993605.1ToGCF_000002035.6.over.chain.gz
liftOver.GCF_000242695.1 liftOver/GCF_010993605.1ToGCF_000242695.1.over.chain.gz

track assembly
longLabel Assembly
shortLabel Assembly
visibility hide
colorByStrand 150,100,30 230,170,40
color 150,100,30
altColor 230,170,40
bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.assembly.bb
type bigBed 6
html html/GCF_010993605.1_kPetMar1.pri.assembly
searchIndex name
searchTrix ixIxx/GCF_010993605.1_kPetMar1.pri.assembly.ix
url https://www.ncbi.nlm.nih.gov/nuccore/$$
urlLabel NCBI Nucleotide database:
group map

track cytoBandIdeo
shortLabel Chromosome Band (Ideogram)
longLabel Ideogram for Orientation
group map
visibility dense
type bigBed 4 +
bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.cytoBand.bb

track gc5Base
shortLabel GC Percent
longLabel GC Percent in 5-Base Windows
group map
visibility dense
autoScale Off
maxHeightPixels 128:36:16
graphTypeDefault Bar
gridDefault OFF
windowingFunction Mean
color 0,0,0
altColor 128,128,128
viewLimits 30:70
type bigWig 0 100
bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.gc5Base.bw
html html/GCF_010993605.1_kPetMar1.pri.gc5Base

track tanDups
shortLabel Tandem Dups
longLabel Paired identical sequences
compositeTrack on
visibility hide
type bigBed 12
group map
html html/GCF_010993605.1_kPetMar1.pri.tanDups

    track gapOverlap
    parent tanDups on
    shortLabel Gap Overlaps
    longLabel Paired exactly identical sequence on each side of a gap
    bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.gapOverlap.bb
    type bigBed 12

    track tandemDups
    parent tanDups on
    shortLabel Tandem Dups
    longLabel Paired exactly identical sequence survey over entire genome assembly
    bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.tandemDups.bb
    type bigBed 12

track repeatMasker
shortLabel RepeatMasker
longLabel RepeatMasker Repetitive Elements
type bigRmsk 9 +
visibility pack
group varRep
bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.rmsk.bb
maxWindowToDraw 5000000
html html/GCF_010993605.1_kPetMar1.pri.repeatMasker

track repeatModeler
shortLabel RepeatModeler
longLabel RepeatModeler Repetitive Elements
type bigRmsk 9 +
visibility hide
group varRep
bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.rModel.bb
xrefDataUrl bbi/GCF_010993605.1_kPetMar1.pri.rModel.align.bb
maxWindowToDraw 5000000
html html/GCF_010993605.1_kPetMar1.pri.repeatModeler

track simpleRepeat
shortLabel Simple Repeats
longLabel Simple Tandem Repeats by TRF
group varRep
visibility dense
type bigBed 4 +
bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.simpleRepeat.bb
html html/GCF_010993605.1_kPetMar1.pri.simpleRepeat

track refSeqComposite
compositeTrack on
shortLabel NCBI RefSeq
longLabel RefSeq gene predictions from NCBI
group genes
visibility pack
type bigBed
dragAndDrop subTracks
allButtonPair on
dataVersion NCBI Petromyzon marinus Annotation Release 100 (2022-09-28)
html html/GCF_010993605.1_kPetMar1.pri.refSeqComposite
priority 2

        track ncbiRefSeq
        parent refSeqComposite on
        color 12,12,120
        shortLabel RefSeq All
        type bigGenePred
        urls geneName="https://www.ncbi.nlm.nih.gov/nuccore/$$?report=genbank" geneName2="https://www.ncbi.nlm.nih.gov/datasets/gene/$D/?search=$$"
        labelFields name,geneName,geneName2
        defaultLabelFields geneName2
        searchIndex name
        searchTrix ixIxx/GCF_010993605.1_kPetMar1.pri.ncbiRefSeq.ix
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.ncbiRefSeq.bb
        longLabel NCBI RefSeq genes, curated and predicted sets (NM_*, XM_*, NR_*, XR_*, NP_* or YP_*)
        idXref ncbiRefSeqLink mrnaAcc name
        baseColorUseCds given
        baseColorDefault genomicCodons
        priority 1

        track ncbiRefSeqPredicted
        color 12,12,120
        parent refSeqComposite on
        shortLabel RefSeq Predicted
        longLabel NCBI RefSeq genes, predicted subset (XM_* or XR_*)
        type bigGenePred
        urls geneName="https://www.ncbi.nlm.nih.gov/nuccore/$$?report=genbank" geneName2="https://www.ncbi.nlm.nih.gov/datasets/gene/$D/?search=$$"
        labelFields name,geneName,geneName2
        defaultLabelFields geneName2
        searchIndex name
        searchTrix ixIxx/GCF_010993605.1_kPetMar1.pri.ncbiRefSeqPredicted.ix
        idXref ncbiRefSeqLink mrnaAcc name
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.ncbiRefSeqPredicted.bb
        baseColorUseCds given
        baseColorDefault genomicCodons
        priority 3

        track ncbiRefSeqOther
        color 32,32,32
        parent refSeqComposite on
        shortLabel RefSeq Other
        longLabel NCBI RefSeq other annotations (not NM_*, NR_*, XM_*, XR_*, NP_* or YP_*)
        priority 4
        searchIndex name
        searchTrix ixIxx/GCF_010993605.1_kPetMar1.pri.ncbiRefSeqOther.ix
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.ncbiRefSeqOther.bb
        type bigBed 12 +
        labelFields name
        skipEmptyFields on
        urls GeneID="https://www.ncbi.nlm.nih.gov/gene/$$" MIM="https://www.ncbi.nlm.nih.gov/omim/$$" HGNC="http://www.genenames.org/cgi-bin/gene_symbol_report?hgnc_id=$$" FlyBase="http://flybase.org/reports/$$" WormBase="http://www.wormbase.org/db/gene/gene?name=$$" RGD="https://rgd.mcw.edu/rgdweb/search/search.html?term=$$" SGD="https://www.yeastgenome.org/locus/$$" miRBase="http://www.mirbase.org/cgi-bin/mirna_entry.pl?acc=$$" ZFIN="https://zfin.org/$$" MGI="http://www.informatics.jax.org/marker/$$"

        track ncbiRefSeqPsl
        priority 5
        parent refSeqComposite off
        shortLabel RefSeq Alignments
        longLabel RefSeq Alignments of RNAs
        type bigPsl
        searchIndex name
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.bigPsl.bb
        indelDoubleInsert on
        indelQueryInsert on
        showDiffBasesAllScales .
        showDiffBasesMaxZoom 10000.0
        showCdsMaxZoom 10000.0
        showCdsAllScales .
        baseColorDefault diffCodons
        pslSequence no
        baseColorUseSequence lfExtra
        baseColorUseCds table given
        color 0,0,0

track cpgIslands
compositeTrack on
shortLabel CpG Islands
longLabel CpG Islands (Islands < 300 Bases are Light Green)
group regulation
visibility dense
type bigBed 4 +
html html/GCF_010993605.1_kPetMar1.pri.cpgIslands

    track cpgIslandExt
    parent cpgIslands off
    shortLabel CpG Islands
    longLabel CpG Islands (Islands < 300 Bases are Light Green)
    type bigBed 4 +
    priority 1
    bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.cpgIslandExt.bb

    track cpgIslandExtUnmasked
    parent cpgIslands on
    shortLabel Unmasked CpG
    longLabel CpG Islands on All Sequence (Islands < 300 Bases are Light Green)
    type bigBed 4 +
    priority 2
    bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.cpgIslandExtUnmasked.bb

track windowMasker
shortLabel WM + SDust
longLabel Genomic Intervals Masked by WindowMasker + SDust
group varRep
visibility dense
type bigBed 3
bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.windowMasker.bb
html html/GCF_010993605.1_kPetMar1.pri.windowMasker

track allGaps
shortLabel All Gaps
longLabel All gaps of unknown nucleotides (N's), including AGP annotated gaps
group map
visibility hide
type bigBed 3
bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.allGaps.bb
html html/GCF_010993605.1_kPetMar1.pri.allGaps

track augustus
shortLabel Augustus
longLabel Augustus Gene Predictions
group genes
visibility dense
color 180,0,0
type bigGenePred
bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.augustus.bb
html html/GCF_010993605.1_kPetMar1.pri.augustus

track xenoRefGene
shortLabel RefSeq mRNAs
longLabel RefSeq mRNAs mapped to this assembly
group rna
visibility pack
color 180,0,0
type bigGenePred
bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.xenoRefGene.bb
url https://www.ncbi.nlm.nih.gov/nuccore/$$
urlLabel NCBI Nucleotide database:
labelFields name,geneName,geneName2
defaultLabelFields geneName
searchIndex name
searchTrix ixIxx/GCF_010993605.1_kPetMar1.pri.xenoRefGene.ix
html html/GCF_010993605.1_kPetMar1.pri.xenoRefGene

track ensGene
shortLabel Ensembl genes
longLabel Ensembl genes 2022_06
group genes
priority 40
visibility pack
color 150,0,0
itemRgb on
type bigGenePred
bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.ensGene.bb
searchTrix ixIxx/GCF_010993605.1_kPetMar1.pri.ensGene.ix
searchIndex name
labelFields name,name2
defaultLabelFields name2
baseColorUseCds given
baseColorDefault genomicCodons
labelSeparator " "
html html/GCF_010993605.1_kPetMar1.pri.ensGene

track GCF_010993605.1_kPetMar1.priChainNet
compositeTrack on
shortLabel Chain/Net
longLabel Chain alignments to target sequence: GCF_010993605.1_kPetMar1.pri
subGroup1 view Views chain=Chains synten=Syntenic rbest=Reciprocal_best liftover=Lift_over align=Alignment
subGroup2 species Assembly s000=GCA_014621495.2 s001=GCF_000242695.1 s002=GCF_000002035.6
subGroup3 chainType chain_type c00=chain c01=syntenic c02=reciprocal_best c03=lift_over c04=chain_align c05=syntenic_align c06=reciprocal_align c07=lift_over_align
dragAndDrop subTracks
visibility hide
group compGeno
color 0,0,0
altColor 255,255,0
type bed 3
chainLinearGap loose
chainMinScore 5000
dimensions dimensionX=chainType dimensionY=species
sortOrder species=+ view=+ chainType=+
configurable on
html html/GCF_010993605.1_kPetMar1.pri.chainNet

    track GCF_010993605.1_kPetMar1.priChainNetViewchain
    shortLabel Chains
    view chain
    visibility dense
    parent GCF_010993605.1_kPetMar1.priChainNet
    spectrum on

    track GCF_010993605.1_kPetMar1.priChainNetViewSynTen
    shortLabel Syntenic
    view synten
    visibility hide
    parent GCF_010993605.1_kPetMar1.priChainNet
    spectrum on

    track GCF_010993605.1_kPetMar1.priChainNetViewRBest
    shortLabel Reciprocal best
    view rbest
    visibility hide
    parent GCF_010993605.1_kPetMar1.priChainNet
    spectrum on

    track GCF_010993605.1_kPetMar1.priChainNetViewLiftOver
    shortLabel Lift over
    view liftover
    visibility hide
    parent GCF_010993605.1_kPetMar1.priChainNet
    spectrum on

        track chainGCA_014621495.2
        parent GCF_010993605.1_kPetMar1.priChainNetViewchain on
        subGroups view=chain species=s000 chainType=c00
        shortLabel Pacific lamprey Chain
        longLabel Pacific lamprey/GCA_014621495.2_ETRf_v1 (2020-11-05) Chained Alignments
        type bigChain GCA_014621495.2
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainGCA_014621495.2.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainGCA_014621495.2Link.bb
        otherDb GCA_014621495.2
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 40.427

        track chainSynGCA_014621495.2
        parent GCF_010993605.1_kPetMar1.priChainNetViewSynTen off
        subGroups view=synten species=s000 chainType=c01
        shortLabel Pacific lamprey synChain
        longLabel Pacific lamprey/GCA_014621495.2_ETRf_v1 (2020-11-05) Chained Alignments
        type bigChain GCA_014621495.2
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainSynGCA_014621495.2.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainSynGCA_014621495.2Link.bb
        otherDb GCA_014621495.2
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 40.427

        track chainRBestGCA_014621495.2
        parent GCF_010993605.1_kPetMar1.priChainNetViewRBest off
        subGroups view=rbest species=s000 chainType=c02
        shortLabel Pacific lamprey rbChain
        longLabel Pacific lamprey/GCA_014621495.2_ETRf_v1 (2020-11-05) Chained Alignments
        type bigChain GCA_014621495.2
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainRBestGCA_014621495.2.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainRBestGCA_014621495.2Link.bb
        otherDb GCA_014621495.2
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 40.427

        track chainLiftOverGCA_014621495.2
        parent GCF_010993605.1_kPetMar1.priChainNetViewLiftOver off
        subGroups view=liftover species=s000 chainType=c03
        shortLabel Pacific lamprey loChain
        longLabel Pacific lamprey/GCA_014621495.2_ETRf_v1 (2020-11-05) Chained Alignments
        type bigChain GCA_014621495.2
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainLiftOverGCA_014621495.2.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainLiftOverGCA_014621495.2Link.bb
        otherDb GCA_014621495.2
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 40.427

        track chainGCF_000242695.1
        parent GCF_010993605.1_kPetMar1.priChainNetViewchain off
        subGroups view=chain species=s001 chainType=c00
        shortLabel spotted gar Chain
        longLabel spotted gar/GCF_000242695.1_LepOcu1 (2012-01-13) Chained Alignments
        type bigChain GCF_000242695.1
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainGCF_000242695.1.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainGCF_000242695.1Link.bb
        otherDb GCF_000242695.1
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 97.336

        track chainSynGCF_000242695.1
        parent GCF_010993605.1_kPetMar1.priChainNetViewSynTen off
        subGroups view=synten species=s001 chainType=c01
        shortLabel spotted gar synChain
        longLabel spotted gar/GCF_000242695.1_LepOcu1 (2012-01-13) Chained Alignments
        type bigChain GCF_000242695.1
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainSynGCF_000242695.1.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainSynGCF_000242695.1Link.bb
        otherDb GCF_000242695.1
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 97.336

        track chainRBestGCF_000242695.1
        parent GCF_010993605.1_kPetMar1.priChainNetViewRBest off
        subGroups view=rbest species=s001 chainType=c02
        shortLabel spotted gar rbChain
        longLabel spotted gar/GCF_000242695.1_LepOcu1 (2012-01-13) Chained Alignments
        type bigChain GCF_000242695.1
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainRBestGCF_000242695.1.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainRBestGCF_000242695.1Link.bb
        otherDb GCF_000242695.1
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 97.336

        track chainLiftOverGCF_000242695.1
        parent GCF_010993605.1_kPetMar1.priChainNetViewLiftOver off
        subGroups view=liftover species=s001 chainType=c03
        shortLabel spotted gar loChain
        longLabel spotted gar/GCF_000242695.1_LepOcu1 (2012-01-13) Chained Alignments
        type bigChain GCF_000242695.1
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainLiftOverGCF_000242695.1.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainLiftOverGCF_000242695.1Link.bb
        otherDb GCF_000242695.1
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 97.336

        track chainGCF_000002035.6
        parent GCF_010993605.1_kPetMar1.priChainNetViewchain off
        subGroups view=chain species=s002 chainType=c00
        shortLabel zebrafish GRCz11 Chain
        longLabel zebrafish GRCz11/GCF_000002035.6_GRCz11 (2017-05-09) Chained Alignments
        type bigChain GCF_000002035.6
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainGCF_000002035.6.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainGCF_000002035.6Link.bb
        otherDb GCF_000002035.6
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 97.796

        track chainSynGCF_000002035.6
        parent GCF_010993605.1_kPetMar1.priChainNetViewSynTen off
        subGroups view=synten species=s002 chainType=c01
        shortLabel zebrafish GRCz11 synChain
        longLabel zebrafish GRCz11/GCF_000002035.6_GRCz11 (2017-05-09) Chained Alignments
        type bigChain GCF_000002035.6
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainSynGCF_000002035.6.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainSynGCF_000002035.6Link.bb
        otherDb GCF_000002035.6
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 97.796

        track chainRBestGCF_000002035.6
        parent GCF_010993605.1_kPetMar1.priChainNetViewRBest off
        subGroups view=rbest species=s002 chainType=c02
        shortLabel zebrafish GRCz11 rbChain
        longLabel zebrafish GRCz11/GCF_000002035.6_GRCz11 (2017-05-09) Chained Alignments
        type bigChain GCF_000002035.6
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainRBestGCF_000002035.6.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainRBestGCF_000002035.6Link.bb
        otherDb GCF_000002035.6
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 97.796

        track chainLiftOverGCF_000002035.6
        parent GCF_010993605.1_kPetMar1.priChainNetViewLiftOver off
        subGroups view=liftover species=s002 chainType=c03
        shortLabel zebrafish GRCz11 loChain
        longLabel zebrafish GRCz11/GCF_000002035.6_GRCz11 (2017-05-09) Chained Alignments
        type bigChain GCF_000002035.6
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainLiftOverGCF_000002035.6.bb
        linkDataUrl bbi/GCF_010993605.1_kPetMar1.pri.chainLiftOverGCF_000002035.6Link.bb
        otherDb GCF_000002035.6
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 97.796

    track GCF_010993605.1_kPetMar1.priMafNetViewnet
    shortLabel Nets
    view align
    visibility hide
    parent GCF_010993605.1_kPetMar1.priChainNet

        track netGCA_014621495.2
        parent GCF_010993605.1_kPetMar1.priMafNetViewnet off
        subGroups view=align species=s000 chainType=c04
        shortLabel Pacific lamprey mafNet
        longLabel Pacific lamprey/GCA_014621495.2_ETRf_v1 (2020-11-05) Chained Alignments
        type bigMaf
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.GCA_014621495.2.net.bb
        summary bbi/GCF_010993605.1_kPetMar1.pri.GCA_014621495.2.net.summary.bb
        speciesOrder GCA_014621495.2
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 40.427

        track synNetGCA_014621495.2
        parent GCF_010993605.1_kPetMar1.priMafNetViewnet off
        subGroups view=align species=s000 chainType=c05
        shortLabel Pacific lamprey synNet
        longLabel Pacific lamprey/GCA_014621495.2_ETRf_v1 (2020-11-05) Chained Alignments
        type bigMaf
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.GCA_014621495.2.synNet.bb
        summary bbi/GCF_010993605.1_kPetMar1.pri.GCA_014621495.2.synNet.summary.bb
        speciesOrder GCA_014621495.2
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 40.427

        track rbestNetGCA_014621495.2
        parent GCF_010993605.1_kPetMar1.priMafNetViewnet off
        subGroups view=align species=s000 chainType=c06
        shortLabel Pacific lamprey rbestNet
        longLabel Pacific lamprey/GCA_014621495.2_ETRf_v1 (2020-11-05) Chained Alignments
        type bigMaf
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.GCA_014621495.2.rbestNet.bb
        summary bbi/GCF_010993605.1_kPetMar1.pri.GCA_014621495.2.rbestNet.summary.bb
        speciesOrder GCA_014621495.2
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
        priority 40.427

        track netGCF_000242695.1
        parent GCF_010993605.1_kPetMar1.priMafNetViewnet off
        subGroups view=align species=s001 chainType=c04
        shortLabel spotted gar mafNet
        longLabel spotted gar/GCF_000242695.1_LepOcu1 (2012-01-13) Chained Alignments
        type bigMaf
        bigDataUrl bbi/GCF_010993605.1_kPetMar1.pri.GCF_000242695.1.net.bb
        summary bbi/GCF_010993605.1_kPetMar1.pri.GCF_000242695.1.net.summary.bb
        speciesOrder GCF_000242695.1
        html html/GCF_010993605.1_kPetMar1.pri.chainNet
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