# Assembly name: ASM2467924v1 # Organism name: Pseudorasbora parva (stone moroko) # Isolate: DD20220531a # Taxid: 51549 # BioSample: SAMN28772710 # BioProject: PRJNA843929 # Submitter: The Max Planck Institute of Molecular Cell Biology and Genetics # Date: 2022-08-16 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JANLNJ01 # Assembly method: HiFiasm v. 0.16.1; purge-dups v. 1.2.3; yahs v. 1.1a; bwa-mem v. 0.7.17; pbmm2 v. 1.30; deepvariant v. 1.2.0; bcftools v. 1.12 # Expected final version: yes # Genome coverage: 22x # Sequencing technology: PacBio Sequel; Illumina NovaSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_024679245.1 # RefSeq assembly accession: GCF_024679245.1 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCA_024679315.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_024679265.1 GCF_024679265.1 Primary Assembly ## GCF_041296485.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name manual_scaffold_1 assembled-molecule 1 Chromosome CM045350.1 = NC_090172.1 Primary Assembly 70945429 na manual_scaffold_2 assembled-molecule 2 Chromosome CM045351.1 = NC_090173.1 Primary Assembly 65081997 na manual_scaffold_3 assembled-molecule 3 Chromosome CM045352.1 = NC_090174.1 Primary Assembly 64720376 na manual_scaffold_4 assembled-molecule 4 Chromosome CM045353.1 = NC_090175.1 Primary Assembly 58880579 na manual_scaffold_5 assembled-molecule 5 Chromosome CM045354.1 = NC_090176.1 Primary Assembly 53700321 na manual_scaffold_6 assembled-molecule 6 Chromosome CM045355.1 = NC_090177.1 Primary Assembly 52001423 na manual_scaffold_7 assembled-molecule 7 Chromosome CM045356.1 = NC_090178.1 Primary Assembly 51612557 na manual_scaffold_8 assembled-molecule 8 Chromosome CM045357.1 = NC_090179.1 Primary Assembly 49618263 na manual_scaffold_9 assembled-molecule 9 Chromosome CM045358.1 = NC_090180.1 Primary Assembly 49481869 na manual_scaffold_10 assembled-molecule 10 Chromosome CM045359.1 = NC_090181.1 Primary Assembly 49212747 na manual_scaffold_11 assembled-molecule 11 Chromosome CM045360.1 = NC_090182.1 Primary Assembly 48180521 na manual_scaffold_12 assembled-molecule 12 Chromosome CM045361.1 = NC_090183.1 Primary Assembly 47421265 na manual_scaffold_13 assembled-molecule 13 Chromosome CM045362.1 = NC_090184.1 Primary Assembly 47244194 na manual_scaffold_14 assembled-molecule 14 Chromosome CM045363.1 = NC_090185.1 Primary Assembly 47228699 na manual_scaffold_15 assembled-molecule 15 Chromosome CM045364.1 = NC_090186.1 Primary Assembly 46074479 na manual_scaffold_16 assembled-molecule 16 Chromosome CM045365.1 = NC_090187.1 Primary Assembly 45968560 na manual_scaffold_17 assembled-molecule 17 Chromosome CM045366.1 = NC_090188.1 Primary Assembly 45115010 na manual_scaffold_18 assembled-molecule 18 Chromosome CM045367.1 = NC_090189.1 Primary Assembly 45076383 na manual_scaffold_19 assembled-molecule 19 Chromosome CM045368.1 = NC_090190.1 Primary Assembly 44645779 na manual_scaffold_20 assembled-molecule 20 Chromosome CM045369.1 = NC_090191.1 Primary Assembly 44131381 na manual_scaffold_21 assembled-molecule 21 Chromosome CM045370.1 = NC_090192.1 Primary Assembly 42207876 na manual_scaffold_22 assembled-molecule 22 Chromosome CM045371.1 = NC_090193.1 Primary Assembly 41862244 na manual_scaffold_23 assembled-molecule 23 Chromosome CM045372.1 = NC_090194.1 Primary Assembly 38578424 na manual_scaffold_24 assembled-molecule 24 Chromosome CM045373.1 = NC_090195.1 Primary Assembly 37596121 na manual_scaffold_25 assembled-molecule 25 Chromosome CM045374.1 = NC_090196.1 Primary Assembly 37333635 na scaffold_31 unplaced-scaffold na na JANLNJ010000026.1 = NW_027125103.1 Primary Assembly 1105039 na scaffold_33 unplaced-scaffold na na JANLNJ010000027.1 = NW_027125104.1 Primary Assembly 1013418 na scaffold_43 unplaced-scaffold na na JANLNJ010000028.1 = NW_027125105.1 Primary Assembly 327215 na scaffold_52 unplaced-scaffold na na JANLNJ010000029.1 = NW_027125106.1 Primary Assembly 156148 na scaffold_53 unplaced-scaffold na na JANLNJ010000030.1 = NW_027125107.1 Primary Assembly 154209 na scaffold_54 unplaced-scaffold na na JANLNJ010000031.1 = NW_027125108.1 Primary Assembly 150758 na scaffold_55 unplaced-scaffold na na JANLNJ010000032.1 = NW_027125109.1 Primary Assembly 148988 na scaffold_61 unplaced-scaffold na na JANLNJ010000033.1 = NW_027125110.1 Primary Assembly 104999 na scaffold_67 unplaced-scaffold na na JANLNJ010000034.1 = NW_027125111.1 Primary Assembly 83521 na scaffold_69 unplaced-scaffold na na JANLNJ010000035.1 = NW_027125112.1 Primary Assembly 78246 na scaffold_72 unplaced-scaffold na na JANLNJ010000036.1 = NW_027125113.1 Primary Assembly 70748 na scaffold_73 unplaced-scaffold na na JANLNJ010000037.1 = NW_027125114.1 Primary Assembly 70213 na scaffold_74 unplaced-scaffold na na JANLNJ010000038.1 = NW_027125115.1 Primary Assembly 67387 na scaffold_79 unplaced-scaffold na na JANLNJ010000039.1 = NW_027125116.1 Primary Assembly 65100 na scaffold_80 unplaced-scaffold na na JANLNJ010000040.1 = NW_027125117.1 Primary Assembly 61130 na scaffold_83 unplaced-scaffold na na JANLNJ010000041.1 = NW_027125118.1 Primary Assembly 57907 na scaffold_84 unplaced-scaffold na na JANLNJ010000042.1 = NW_027125119.1 Primary Assembly 56920 na scaffold_85 unplaced-scaffold na na JANLNJ010000043.1 = NW_027125120.1 Primary Assembly 56356 na scaffold_86 unplaced-scaffold na na JANLNJ010000044.1 = NW_027125121.1 Primary Assembly 55394 na scaffold_88 unplaced-scaffold na na JANLNJ010000045.1 = NW_027125122.1 Primary Assembly 52660 na scaffold_89 unplaced-scaffold na na JANLNJ010000046.1 = NW_027125123.1 Primary Assembly 51719 na scaffold_90 unplaced-scaffold na na JANLNJ010000047.1 = NW_027125124.1 Primary Assembly 51163 na scaffold_91 unplaced-scaffold na na JANLNJ010000048.1 = NW_027125125.1 Primary Assembly 50797 na scaffold_92 unplaced-scaffold na na JANLNJ010000049.1 = NW_027125126.1 Primary Assembly 49604 na scaffold_94 unplaced-scaffold na na JANLNJ010000050.1 = NW_027125127.1 Primary Assembly 44825 na scaffold_95 unplaced-scaffold na na JANLNJ010000051.1 = NW_027125128.1 Primary Assembly 43158 na scaffold_96 unplaced-scaffold na na JANLNJ010000052.1 = NW_027125129.1 Primary Assembly 42555 na scaffold_98 unplaced-scaffold na na JANLNJ010000053.1 = NW_027125130.1 Primary Assembly 39026 na scaffold_99 unplaced-scaffold na na JANLNJ010000054.1 = NW_027125131.1 Primary Assembly 38641 na scaffold_101 unplaced-scaffold na na JANLNJ010000055.1 = NW_027125077.1 Primary Assembly 33544 na scaffold_102 unplaced-scaffold na na JANLNJ010000056.1 = NW_027125078.1 Primary Assembly 32737 na scaffold_103 unplaced-scaffold na na JANLNJ010000057.1 = NW_027125079.1 Primary Assembly 32705 na scaffold_105 unplaced-scaffold na na JANLNJ010000058.1 = NW_027125080.1 Primary Assembly 29851 na scaffold_106 unplaced-scaffold na na JANLNJ010000059.1 = NW_027125081.1 Primary Assembly 29584 na scaffold_107 unplaced-scaffold na na JANLNJ010000060.1 = NW_027125082.1 Primary Assembly 29485 na scaffold_108 unplaced-scaffold na na JANLNJ010000061.1 = NW_027125083.1 Primary Assembly 29214 na scaffold_109 unplaced-scaffold na na JANLNJ010000062.1 = NW_027125084.1 Primary Assembly 28877 na scaffold_111 unplaced-scaffold na na JANLNJ010000063.1 = NW_027125085.1 Primary Assembly 26554 na scaffold_113 unplaced-scaffold na na JANLNJ010000064.1 = NW_027125086.1 Primary Assembly 25888 na scaffold_114 unplaced-scaffold na na JANLNJ010000065.1 = NW_027125087.1 Primary Assembly 23924 na scaffold_115 unplaced-scaffold na na JANLNJ010000066.1 = NW_027125088.1 Primary Assembly 23476 na scaffold_116 unplaced-scaffold na na JANLNJ010000067.1 = NW_027125089.1 Primary Assembly 22488 na scaffold_117 unplaced-scaffold na na JANLNJ010000068.1 = NW_027125090.1 Primary Assembly 21747 na scaffold_118 unplaced-scaffold na na JANLNJ010000069.1 = NW_027125091.1 Primary Assembly 21239 na scaffold_119 unplaced-scaffold na na JANLNJ010000070.1 = NW_027125092.1 Primary Assembly 20027 na scaffold_121 unplaced-scaffold na na JANLNJ010000071.1 = NW_027125093.1 Primary Assembly 18884 na scaffold_122 unplaced-scaffold na na JANLNJ010000072.1 = NW_027125094.1 Primary Assembly 18777 na scaffold_123 unplaced-scaffold na na JANLNJ010000073.1 = NW_027125095.1 Primary Assembly 17771 na scaffold_124 unplaced-scaffold na na JANLNJ010000074.1 = NW_027125096.1 Primary Assembly 15915 na scaffold_125 unplaced-scaffold na na JANLNJ010000075.1 = NW_027125097.1 Primary Assembly 15888 na scaffold_126 unplaced-scaffold na na JANLNJ010000076.1 = NW_027125098.1 Primary Assembly 15121 na scaffold_127 unplaced-scaffold na na JANLNJ010000077.1 = NW_027125099.1 Primary Assembly 14307 na scaffold_128 unplaced-scaffold na na JANLNJ010000078.1 = NW_027125100.1 Primary Assembly 13797 na scaffold_129 unplaced-scaffold na na JANLNJ010000079.1 = NW_027125101.1 Primary Assembly 11321 na scaffold_130 unplaced-scaffold na na JANLNJ010000080.1 = NW_027125102.1 Primary Assembly 11091 na MT assembled-molecule MT Mitochondrion na <> NC_015614.1 non-nuclear 16600 na