# Assembly name: drRosRugo1.1 # Organism name: Rosa rugosa (eudicots) # Taxid: 74645 # BioSample: SAMEA111431194 # BioProject: PRJEB64184 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2023-07-18 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAUDJL01 # Assembly method: various # Genome coverage: 54x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_958449725.1 # RefSeq assembly accession: GCF_958449725.1 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCA_958301625.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_958449724.1 GCF_958449724.1 Primary Assembly ## GCA_958449726.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OY288191.1 = NC_084820.1 Primary Assembly 72975089 na SUPER_2 assembled-molecule 2 Chromosome OY288192.1 = NC_084821.1 Primary Assembly 72780665 na SUPER_3 assembled-molecule 3 Chromosome OY288193.1 = NC_084822.1 Primary Assembly 59034732 na SUPER_4 assembled-molecule 4 Chromosome OY288194.1 = NC_084823.1 Primary Assembly 58176182 na SUPER_5 assembled-molecule 5 Chromosome OY288195.1 = NC_084824.1 Primary Assembly 56393972 na SUPER_6 assembled-molecule 6 Chromosome OY288196.1 = NC_084825.1 Primary Assembly 54899299 na SUPER_7 assembled-molecule 7 Chromosome OY288197.1 = NC_084826.1 Primary Assembly 41385338 na SUPER_2_unloc_1 unlocalized-scaffold 2 Chromosome CAUDJL010000001.1 = NW_026908904.1 Primary Assembly 27237 na SUPER_7_unloc_1 unlocalized-scaffold 7 Chromosome CAUDJL010000002.1 = NW_026908905.1 Primary Assembly 100433 na SUPER_7_unloc_2 unlocalized-scaffold 7 Chromosome CAUDJL010000003.1 = NW_026908906.1 Primary Assembly 45254 na SCAFFOLD_157 unplaced-scaffold na na CAUDJL010000004.1 = NW_026908907.1 Primary Assembly 25700 na SCAFFOLD_225 unplaced-scaffold na na CAUDJL010000005.1 = NW_026908908.1 Primary Assembly 2000 na SCAFFOLD_186 unplaced-scaffold na na CAUDJL010000006.1 = NW_026908909.1 Primary Assembly 18615 na SCAFFOLD_170 unplaced-scaffold na na CAUDJL010000007.1 = NW_026908910.1 Primary Assembly 21327 na SCAFFOLD_189 unplaced-scaffold na na CAUDJL010000008.1 = NW_026908911.1 Primary Assembly 18330 na SCAFFOLD_195 unplaced-scaffold na na CAUDJL010000009.1 = NW_026908912.1 Primary Assembly 17572 na SCAFFOLD_177 unplaced-scaffold na na CAUDJL010000010.1 = NW_026908913.1 Primary Assembly 19722 na SCAFFOLD_219 unplaced-scaffold na na CAUDJL010000011.1 = NW_026908914.1 Primary Assembly 13019 na SCAFFOLD_216 unplaced-scaffold na na CAUDJL010000012.1 = NW_026908915.1 Primary Assembly 14038 na SCAFFOLD_200 unplaced-scaffold na na CAUDJL010000013.1 = NW_026908916.1 Primary Assembly 17000 na SCAFFOLD_184 unplaced-scaffold na na CAUDJL010000014.1 = NW_026908917.1 Primary Assembly 19027 na SCAFFOLD_188 unplaced-scaffold na na CAUDJL010000015.1 = NW_026908918.1 Primary Assembly 18368 na SCAFFOLD_160 unplaced-scaffold na na CAUDJL010000016.1 = NW_026908919.1 Primary Assembly 24854 na SCAFFOLD_214 unplaced-scaffold na na CAUDJL010000017.1 = NW_026908920.1 Primary Assembly 14107 na SCAFFOLD_212 unplaced-scaffold na na CAUDJL010000018.1 = NW_026908921.1 Primary Assembly 14345 na SCAFFOLD_207 unplaced-scaffold na na CAUDJL010000019.1 = NW_026908922.1 Primary Assembly 15788 na SCAFFOLD_218 unplaced-scaffold na na CAUDJL010000020.1 = NW_026908923.1 Primary Assembly 13898 na SCAFFOLD_165 unplaced-scaffold na na CAUDJL010000021.1 = NW_026908924.1 Primary Assembly 22155 na SCAFFOLD_205 unplaced-scaffold na na CAUDJL010000022.1 = NW_026908925.1 Primary Assembly 16070 na SCAFFOLD_213 unplaced-scaffold na na CAUDJL010000023.1 = NW_026908926.1 Primary Assembly 14181 na SCAFFOLD_181 unplaced-scaffold na na CAUDJL010000024.1 = NW_026908927.1 Primary Assembly 19156 na SCAFFOLD_197 unplaced-scaffold na na CAUDJL010000025.1 = NW_026908928.1 Primary Assembly 17377 na SCAFFOLD_183 unplaced-scaffold na na CAUDJL010000026.1 = NW_026908929.1 Primary Assembly 19061 na SCAFFOLD_220 unplaced-scaffold na na CAUDJL010000027.1 = NW_026908930.1 Primary Assembly 13007 na SCAFFOLD_175 unplaced-scaffold na na CAUDJL010000028.1 = NW_026908931.1 Primary Assembly 20191 na SCAFFOLD_190 unplaced-scaffold na na CAUDJL010000029.1 = NW_026908932.1 Primary Assembly 18229 na SCAFFOLD_211 unplaced-scaffold na na CAUDJL010000030.1 = NW_026908933.1 Primary Assembly 14383 na SCAFFOLD_139 unplaced-scaffold na na CAUDJL010000031.1 = NW_026908934.1 Primary Assembly 32300 na SCAFFOLD_208 unplaced-scaffold na na CAUDJL010000032.1 = NW_026908935.1 Primary Assembly 15779 na SCAFFOLD_217 unplaced-scaffold na na CAUDJL010000033.1 = NW_026908936.1 Primary Assembly 13920 na SCAFFOLD_176 unplaced-scaffold na na CAUDJL010000034.1 = NW_026908937.1 Primary Assembly 19949 na SCAFFOLD_180 unplaced-scaffold na na CAUDJL010000035.1 = NW_026908938.1 Primary Assembly 19319 na SCAFFOLD_179 unplaced-scaffold na na CAUDJL010000036.1 = NW_026908939.1 Primary Assembly 19343 na SCAFFOLD_223 unplaced-scaffold na na CAUDJL010000037.1 = NW_026908940.1 Primary Assembly 11891 na SCAFFOLD_202 unplaced-scaffold na na CAUDJL010000038.1 = NW_026908941.1 Primary Assembly 16796 na SCAFFOLD_204 unplaced-scaffold na na CAUDJL010000039.1 = NW_026908942.1 Primary Assembly 16150 na SCAFFOLD_55 unplaced-scaffold na na CAUDJL010000040.1 = NW_026908943.1 Primary Assembly 109000 na SCAFFOLD_145 unplaced-scaffold na na CAUDJL010000041.1 = NW_026908944.1 Primary Assembly 30554 na SCAFFOLD_193 unplaced-scaffold na na CAUDJL010000042.1 = NW_026908945.1 Primary Assembly 17662 na SCAFFOLD_221 unplaced-scaffold na na CAUDJL010000043.1 = NW_026908946.1 Primary Assembly 12981 na SCAFFOLD_187 unplaced-scaffold na na CAUDJL010000044.1 = NW_026908947.1 Primary Assembly 18469 na SCAFFOLD_168 unplaced-scaffold na na CAUDJL010000045.1 = NW_026908948.1 Primary Assembly 21645 na SCAFFOLD_191 unplaced-scaffold na na CAUDJL010000046.1 = NW_026908949.1 Primary Assembly 18032 na SCAFFOLD_162 unplaced-scaffold na na CAUDJL010000047.1 = NW_026908950.1 Primary Assembly 24151 na SCAFFOLD_172 unplaced-scaffold na na CAUDJL010000048.1 = NW_026908951.1 Primary Assembly 20612 na SCAFFOLD_206 unplaced-scaffold na na CAUDJL010000049.1 = NW_026908952.1 Primary Assembly 15971 na SCAFFOLD_209 unplaced-scaffold na na CAUDJL010000050.1 = NW_026908953.1 Primary Assembly 15038 na SCAFFOLD_178 unplaced-scaffold na na CAUDJL010000051.1 = NW_026908954.1 Primary Assembly 19405 na SCAFFOLD_169 unplaced-scaffold na na CAUDJL010000052.1 = NW_026908955.1 Primary Assembly 21530 na SCAFFOLD_166 unplaced-scaffold na na CAUDJL010000053.1 = NW_026908956.1 Primary Assembly 21857 na SCAFFOLD_152 unplaced-scaffold na na CAUDJL010000054.1 = NW_026908957.1 Primary Assembly 27524 na SCAFFOLD_201 unplaced-scaffold na na CAUDJL010000055.1 = NW_026908958.1 Primary Assembly 16935 na SCAFFOLD_163 unplaced-scaffold na na CAUDJL010000056.1 = NW_026908959.1 Primary Assembly 23077 na SCAFFOLD_198 unplaced-scaffold na na CAUDJL010000057.1 = NW_026908960.1 Primary Assembly 17334 na SCAFFOLD_161 unplaced-scaffold na na CAUDJL010000058.1 = NW_026908961.1 Primary Assembly 24565 na SCAFFOLD_194 unplaced-scaffold na na CAUDJL010000059.1 = NW_026908962.1 Primary Assembly 17579 na SCAFFOLD_192 unplaced-scaffold na na CAUDJL010000060.1 = NW_026908963.1 Primary Assembly 18002 na SCAFFOLD_224 unplaced-scaffold na na CAUDJL010000061.1 = NW_026908964.1 Primary Assembly 11557 na SCAFFOLD_222 unplaced-scaffold na na CAUDJL010000062.1 = NW_026908965.1 Primary Assembly 12267 na SCAFFOLD_215 unplaced-scaffold na na CAUDJL010000063.1 = NW_026908966.1 Primary Assembly 14066 na SCAFFOLD_171 unplaced-scaffold na na CAUDJL010000064.1 = NW_026908967.1 Primary Assembly 21143 na SCAFFOLD_153 unplaced-scaffold na na CAUDJL010000065.1 = NW_026908968.1 Primary Assembly 27240 na SCAFFOLD_185 unplaced-scaffold na na CAUDJL010000066.1 = NW_026908969.1 Primary Assembly 18963 na SCAFFOLD_199 unplaced-scaffold na na CAUDJL010000067.1 = NW_026908970.1 Primary Assembly 17296 na SCAFFOLD_151 unplaced-scaffold na na CAUDJL010000068.1 = NW_026908971.1 Primary Assembly 27588 na SCAFFOLD_173 unplaced-scaffold na na CAUDJL010000069.1 = NW_026908972.1 Primary Assembly 20471 na SCAFFOLD_226 unplaced-scaffold na na CAUDJL010000070.1 = NW_026908973.1 Primary Assembly 1000 na scaffold_MT_1 assembled-molecule MT Mitochondrion OY288198.1 <> na non-nuclear 302780 na