##maf version=1 scoring=multiz a score=10958.000000 s hg15.chr7_random 91177 80 + 1057565 ACAAATGAAAGGATGAGATAAGATGACCTTCCACATTAAGGCACTGGAAAGAATAGCAAACTAAACCTAAAGCAAGCAGA s mm3.chr10 91103220 79 - 130738012 ACAGATTAGAGAATCA-ATGAATCATATTTACAAATTAAGAGACTGGAAAACAAAGCAAACTAAACCTATAGCAAGCAGA s rn2.chr20 40553048 79 + 54947872 acagatttaaaaatca-acgaaccatagttacaaattaagagatgagaaaacaaagccaactaaacccatagtaaGCAGA a score=41230.000000 s hg15.chr7_random 94054 425 + 1057565 tttacatgaaatggggagacaAGTCATTATCCCATTATCAATATTTTAATAAATTGGGTCCATGAACCAAATCCAATGAGATTAAATCAATTAATAATAATATTCAAATTGGTATTAAAATTACAAGAATTACGTGCATATTTGAGAACAGGAGAGTCATGATTGTTTATCCGCAATAATAAACATTATTAATTTTAATTGTGATCAGCTAAAGGAAATTAATTGCAATACATCATGCTTTATAATGTGACTGTCAAAAGGAAACTATGATTGTAATCTTACACTACATCTATCAATGTCTTTGATTCATAAGACTATAGAGTAAGCCCCTAGTTTTCAAAG------------------------------------------------------------------------------CCAACTTTTGAGGCAGTGACATCTTATGCAAGTTTGCTGCTTTCTGCCACAGTGATCCTTGGTCAGCTGTCACAAATTGTTTT s mm3.chr11 108060891 454 - 122862689 tttacatGAAATAGaaatataaataattatttcattatcaatattttaataaatttaaaCCATT-TCCAAACCCAATGTGGCTTAAT----------TAATATATAAACTTTAACCTAAATTACGAAAATGACTTGTAATTTCCAGAACA----------GATTGC----------TGATAAACAGTCTTAATTTTAATT--------------GAGATTAATTGCCACAGGTAGAGCTCTATGATGTGACTGTCAAAGGAGAAC-ATAATT-TAACCTTATGTTATTTCCACCaatatttcataata--aaaaatataaagtaattttatacttttaaatttaCAATACAAAAGCATCTCTTTTTAAAttttacattttcttttacactccagatttcatcccactcccagtctaccctctgactgttccaACAAAAGCATGTTATGTTAATTGTTTACCATTTAGTACAATGAGTGTTGTTCAGCTTTGAGAAATTACTTT s rn2.chr14 16103536 374 - 107821284 TTTACATGAAACGGAGAGATGaataattatttcattatcaataatttaataaatttaaaCCATTAGCCAAACCCAATGTAATTTAAT----------TAATATACAAACTTTAACCTAAATTATGAAAATTACTTGTAATTTCCAGAAGA----------GACTGC----------TGATAAACAGTCTTAATTTTAATT--------------GGGATTAATTGCCACAGGTAGAGCACTATGATATGACTGTCAAAGGATAAC-ACAATT-TAACCTTATGTTATTTCCACCAATATTTTGTACT---GAAAATATAAACTGAGTTTATATTTTTAAATG---AATTAAAAAG-----------------------------------------------------------------------------ACAAAAGCTTGTTATATGAATTGTTTACTGTGTAATACAATGAGTGTTGTTCAAGTTTGAGAAATTTTTTT a score=31553.000000 s hg15.chr7_random 94479 486 + 1057565 ACAAACGCCC-------------------------------CTAGGTCT-AAAAATAGTTTGGATCACAATGAACACAGAATCACCTTCATCCCTTCAGAAATACCTATCAATTACTTCCAATACAGAATGAAAAATTGACAAAGGAAATATGTGGATTGTAAAAATGCCAGTTAGCTTGCATCTACATGAAAGAAAAATGCCATTTTTATTACATTAGATCATTGTTTCACATGAGTTTTGGCATGGCACAATGTTGAACCAAGGGCAAAGAGAGATAAATTAATGAAGTCTTAAGACAT-----CAAGAATTTGAAAGAAAAGGCAGGTTATCTTTGAAGTTTAGTGACATAGCATTCATCTTCTGTTGTCACCTTTTCTGTCATTTCCTGTATGCCTGATGGACAGGTTTCACTCAAGTTCAGAGAACAGCATGCAAA-ATTAGCTACCAGTTAATCTTTATGAAGTGAGCTG--CATTTCTAGCCAGACTGAGCTTAC-----GTTTTAGCAGGAAGCATTTTTGGG s mm3.chr11 108061551 485 - 122862689 ATAAATGCACACATAATTATAAATCTTTATAAAACATGGTGCTATATTTGAAAAAGTATTTAGATTACAAAAATCACTGGCACATTTCTGTCCCTTTACAA------ATCAATGAATTCTAGTGTAGCATGGAAAACTGACTATGGAACTAGAGAGTC-----------------ACTTAGAACTGCAGGAGAGAAGCCTTCCCCCGTTACTGCCTTAATCAGTGA--CTACATGAACTGA-GTGTTTCTCCACTTTGGATCAAA-GTGTAGAGTGATAAAAGGATCACACTATAGCATACCAATGCAATGGTTAACAACAGAGAGAAGACTA-CCTGCACATTTATCAAAATA-CATTCATTCCGTGTGCTTGATTTTCCA-CCACT--CTGCA-----TATGGGATACTTTTAATCAAGCTCAGATAAGATCATGTAAAGAGTACCCATCAATCAATAACTATAGAGT--TCAT--TAGCTTCAAAAATAC----CTTGCAAGA-GTATCTGTAGAAAACATGTTTTGA s rn2.chr14 16104114 484 - 107821284 ATAAATACACACATAATTATAAA---CTATGAAACCTGCTGCTATGTTTGGAAAAGTATTTAGATTACAACAACCACTGGCAGTTCTCTATCCCTTTATAA------ATAAATTAATTCTAGTATAGCATGAAAAACTGGCTATGGAAATACAGAGTC------------------CTTAGAGCTACCTGATAGTAATGTGTCCTCCTTACTAACTTAAACAATAATGTTGTATGAACTAT-GTATTTCTCCACTTTGGGTCAAAGGTATAGAGGGATAAAAGGATCACACTATAACATAC-----CAATGGTTAACAGCAGAGAGAAGACCA-CCTGGAAATTTATCAACATA-CACTCATTCTGTGTGCTTGACTTTTCC-CCACT--CTGTA-----GATGGACACCTTTTAATCAAACTCAGATAAGGCCATGTATAGAGTACCACTAAGTCAATCACTACAGAGGGAGCATTGTGGGGCAAAGGATAC----CTTCCAAGAGGTATTTTTATAAAACATGTATTCA a score=68584.000000 s hg15.chr7_random 95041 549 + 1057565 GGAAGATATTTGGGGGAATCATTTACTCAAACTCTAAATAATAAAGGTACACAAAGGGCAAATTATACT-AGATTTCTTTCCCACTTGTTTTCTATGTCTCATGCAATTCACCTTGATTCCCTTCAGTTTCTGTTTAATGTAGAAAGTGGCATTTTCATTATTTTAAACTTCTAGCACAATGAAAGAATTTCTCTTTTTCATGAACAGGATCATAAATGAAAGGGAGGAAGAGTGTCCTATATCATATTTATTGTTCAACAAAACACTGCTCCACAGCTTAAATTCAGTTTA-AAAAAGAGAATTTATTGAACA-------CATACATAAAAGGCAGT--AAAGACAAATGAGAAGAGGGCAGGATATTGAAGTATACAGACTTCAATGCTGAGTTTTATATCTTAGGAAGTTACTCCACCTTACAGAGGCTCAATTTCCCCTGATCTAGGAAGGCGATGCTAATGGGTATTGCATAG-GTGTAAG---TTGAAAAATGTTGTATTTAAGAGAATCCCACAAGCTTGGTATAAGGCAGAAAATAAATAGATGTGACATGAATAA s mm3.chr11 108062516 544 - 122862689 GGCAGAAAGATTGGGGAATTATTTACT-AACAGCTAAGAAGTAAATTGACATGCCAGACAAATAATTTTGTGTGTATTTTTCCACTAGTTTTCTATACATGATGCATTTCAGTTTCCTT-TCTCCAGTTTCTGGCTCACATGGGAAGTTCCATTTTCAATATTTCAAGCTTCTAACACAATGAAAGTATTTCTGTCATCCATAAACTTGGTCATGCCTGAAAGG--AGAGAAGTTTCTTGTGTCATATTTATTGTTTAG-AAAGC--------ACAACTTAAATTTAATTTATAGAAACAGGCTGTATTGAACATACAGAACATACATAAAACTCTGTGGAAAAATAAATGCAAACAGGGAAAAGTCTTGAGTTATATGAGTCATAATGTTGAGTTCCATATTCTGGAAAGTGATTTCAACTTATGAATCCGCATTTTCCTCTG-TTTAATAAGA-AAGACTGACAGGTGTTGCAGAGAATATAAGAAAGAGGAAAAT-CTATATTTATGATGACCCAAAGAGTTTCAAGTAATAC----AGTTAATACATGTAATAGAAATAA s rn2.chr14 16104762 547 - 107821284 GGCAGAAAGATTGGGGAATTATTTACT-AACAGCTAAGGAGTAAATTGTCATGATAGACAAATAGTTTT------ATTTTTCCACTACTTGTCTACACCTCATATATTTCAGTTTGATT-TCTTCAGTTTCTGGCTTACATGGAAAGTTCCATTTTCATTATTTCAAGCTTCTAACACAATGAAAGGATTTCTGTCATCCACAAACTTGGTCATGCTTAAAAGA--TGAGACATTTTTTGTGTCATATTTATTGTTTAG-AAAGCCATGCTACACAGCTTAAATTCAATTCATAGAAACAGACTGTATTGAACATAGAGATCATACATAAAACTCTGTGAAAAAAGAAATGGAAAGAGGGAAATTTCTTGAGTTGTATAAGCCATAAGGTTGAATTCTACATACAGAAAAGTGATGTCAATTTATGAATCCTCATTTTCCTCTG-CTTAAGAAGG-AAGTCTAATGGATGTTGCAAAGAATATAAGAAAGAGGAAAAT-CTATATTTATGATGAACACAAGAGTTTCAAGTAATGC---AAGTTAATACATGCAATAGAAATAA a score=8317.000000 s hg15.chr7_random 95917 50 + 1057565 CATAAAATTCATTTTAATGCACGTGTTTATGCATAGCTTTCTATTTTTCT s mm3.chr11 108072348 50 - 122862689 CATAAATCATATTTGAAGGCAAGTAGTTATGTATACATCTCTATTTATCT s rn2.chr14 16120147 50 - 107821284 CATAAATCATATTTGAAGGCAAGTAATTATCTATACATCTCTATTTATCT a score=90394.000000 s hg15.chr7_random 97546 695 + 1057565 GGTCTCTCATCTTGTAAGATGGATATGACAGAACTTTCTCTGAGAAATGAAATTACTAACACACCTGCGAGGTGGATGGAAGAGAAAAAAAAGAATAATCAGCTTGAGT---TCTTCTCCTTGATAAGACAACTCACTAAAACCTTAAAGAGAAAAA----TACAAGTTTAAAATAATTAACAAGAAGAAGACGACTCTAGCGTTTTTAAATTGCTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAATTATATTGCTTGTGTTTTAAGGCACATAATGAGCACTTATATCACACATGATAGTTTCAGCAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAACTACTATTCTGCAAATTTAAAAATAAAGTT-TGAATGTTATTTGTCCTATTTAAAAGGTCTGTGAAAAA-AATGCACTATATGAAAAGTAGCTGCTACCTTAAATAATTATTTTAGACGGCTGGTTACAGTAATGCACAGTAAGGTGCTACATAGATATATTGCTAAATTTTCTGCATATACTATGTATTTGGCTTAAATTATTTGAAA-----TTATATAGTGAAAATAACAAATGCATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAA-------AGCGTCTTACACTCTA-AATATTATTTG s mm3.chr11 108086147 650 - 122862689 GACTTCTCACCTTGCATAATAGTTACAAAGCCACATTTCCACAGAGACATAACTGTTAACACACCTGCGAGGTACATGG-AGAAAAATAAGAGTTT----------------TTTTTTTCTTGACAAA-----TCACTAAAAAATTACAAGGAAAAAGAATCACTACTTTTCTATCATTAATCAAAAGGAGACAACTGCAGAATATTTTAGGTGCTGATAAGATTTTAATTGGTTTCAAGTTGAAAATAACTACATTGCTGATGTTTTAAGGAATGTAATGAGCAATTATATTACACACGATAGATTTAGCAGTATAATATTACCAGTTAACAGCTGGAACTCATAAACACACAGCACAGTGTGAATGTGAAATTTTCCAGGATAAACCATCTGTAGCAAAGAACTATTCTAGAAATTTAAAAAGAAGGTGAAAAATGTTATTTGCCTTATTTAACTGATCTGGTAAAAATGATGAG--ATTTTAGAAGTAGTTGAA-TCCTATTTAGC---------TAGTTGTTTAAAATAGCATAGA------------CAAGGAGTATACCAATATTTT---CACATCTCATGTAGTTAGT-----TTATTTGAAGATAGTTTTTATAA----ACTAGTAAATGTTTATT------CTTTCATATAAAATC---ATGCTCCTTTATGAAGTTTTTAGCAATTTACATTCTACACTAGTATTTG s rn2.chr14 16135272 691 - 107821284 GTCTTCTCACCTTGTATAACAGTTACAAAGCAACATTTCCACAGAGACAGAACTGTTAACACACCTGCGAGTTACATGA-GGAAAAATAAAAGATTAATCAGCTTGAGGATTTTTTTTTCTTGATAAA-----TCAGTAAAAAATTACACAGAAAAAAAATCACCACTTTTCTATCATTAATCAAAAGAAGACAACTGTAGAA-ATTTAAGATGCTGATAAGATTTTAATTTGTTTCAAGCTGAAAATAACTACATTGCTGATGTTTTAGGGAACATAATGAGCAATTATATTTCACACGATAGATGTAGCAGTATAATATTACCAGTTAACAGCTGGAACTCATAAACACACAGCACAGTGTGAACATGAAATTTGCTAAGATAAACCATCTGTAGAAAAGAACCATTCTGCAAATTTAAAAAGAAAGTGAAAAATGGTATTTGCCTTATTTAACTGATCTGTTAAAAATGATGAG--ATTTTAAAAGTAGCTGAATTCTTATTTATCCATATTAGGCAGTTGGTTAGAATAACAAAGAGAAAAAAGCTACTAAGGAGTTTACCATTATTTT---CAAATCTCATATAGTTAGT-----TTATTTGAAGATAATTTTTATAATTAGACTGGTAACTGTTTATT------GTTCTCTATAAAATG---AGGCTCCTTTATGAGGGTTTCAGCAATTTACATTCTACACTAGCATTTG a score=22847.000000 s hg15.chr7_random 101896 327 + 1057565 GTAATCCAATAATATTAATAATCATATTGATTAGCCCAAATTAAAA-ATAAATAGGGGATTCTCA--GTACATGCTAAAATATATTCGTTAAAAGGCAATATTCATGTCTTTAAAGAT---TTTAAATGCTATAAAGGGTCTGATATTCTATATGCAAACATGTGTATGTCC--ATTAGAAGAATAGAGACCTGATTTTCATGTTACTACATAGAGATAGAGAAGTGGATAGATTAATTTGCATATGCATAGAGAAAGCATAAAATAGAAATTGACTATCATAT-TAAAGGAATTTTAA-----TTCAACAATAAAATAA---TTCAAAGGtaaaatttta----------------------aat s mm3.chr11 108088431 334 - 122862689 GTGATCCAGCAACATAAAGAAGAATAGTAATGAGTTCAAGCAAAAAAAGAAATCAACATCTGCCATTGAATAGGAAGAAACTCTTTTGTTAAGAGAGTATATCTATGTGCTCAAATCCATGTCTAAAACCCAT-AATATTTTAATATT------------ATGTCTATGGCTAAATTACACACAGAGAAAAGAGTC-TTGGTATAGTTATGTAAGTAGA------TAGATGTGTTCATTTGCATATACAAAAAGAA-----AAATTAACAGCTCATTGTGAGATATAAAGGAAATAAA------ATCAATTATAAAATAATGTTGCAATTCTAAA-TTTTAAGGTCTACTAACATCTAGTGAAAAT s rn2.chr14 16139257 337 - 107821284 gtgATTCAGTAATATAAACAAGAATAGTAATGAGTTTAAACAAAAA--GAAATCAATGTGGGCCATTGAACAAGAAGAAACATTTTTGTTAAGAGAGCATAGCCATGCCCTCAAATCCATGTCTAAAACCCAT-AATAATTTAATCTT------------ATATCTATGGCTAAACTACACAGAGAAACAAGTGTCTTTGGTTCAGCTACATAAAC---------TAGATATGCTCATTAGCATATGCAAAGAGAA-----AAATTTAAAGTTCATTGTGTTACATAAAGGAAATAAAATAAATATCAACGATAAACTAATGCTGCAATTTCAAATTTTTAAGGTATAGTAACCTCTACTGACAAT a score=207.000000 s hg15.chr7_random 102223 66 + 1057565 atttttaaCAGGTACA---TTA--TTAATATTAGATACTATT-TATAATAATTGTGAAAATA----------TTCAGTGCTA s mm3.chr11 108088765 82 - 122862689 ATTATTGACAGGTATAAATGTAGTTTGATAGTATATTTTAGTACAAAGTGATGATAAACATAAGGTTTGAAATTTGGTTTAA a score=4617.000000 s hg15.chr7_random 102289 746 + 1057565 A-------AATAAGATACAATGTCTAAACATCATTATTAAAAG------TAGTATAAATATTTGCTTCTTTATACAAGGAAAATTCAAGCTCGACCTAAAATTATATGGGAAATAAAAGAAAAATTTTAAGGGAGCTCTTTAATAacataaacatatatatatacacacacatataacatgt-----atatatGTTATATGGGATAGATATAGATTTAACATGTTATATCTATATTTGTATCTATAACTACAGCTGTATGTATCTACATTTCTATATATTTACTCAGTGATATAAATATAGACTGGAATAAATATAAGGTGACATATGATTCTTGGATAAAAAGGATTTAGTATCATAAAGACAAATTCTTTCCAGATTCACTTATGAATT----CACAACCATATACAGTTTCATTAGTATAATTTAACACTTTTAAATAAATTCCTAGATTCATTTAAAGGAATATACATGTATACAAACAGTCAAGAAAGAAGCAAGAGTGCACTAAACTAACTTCCTATTAAAATACATTTTT-AAACTTAGTCACTAAAACTGAGCGTACTGATTT-GGAGTACTGGAATTTTGGTATAT---GGGATCTCAAAAGCACAGAGCTCAAAGG-AGACCCCTGTATGCACGAGAGCTTAGGATGTGCTTTAGAAGGCATTACCAAACCACGGGCA-AAGTTACTTCAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGA------TAAAAG---ACTCAAGACCACCATATAAGAGCAAAACAGAAGGAC s mm3.chr11 108088965 707 - 122862689 aCAAAGCAAATGAAAAACAAG--CAAAATAAAATGAACAAAAGATGAAATAAAAAAGATAATTG-----------Gaaaaaattttaaatt-----ttgaattatata--aaataaaaGTCAAGTTTAACATAAACT-TTCAATATGAAAAATTAATATTTAGTAACATATGTGTTACTTGCTATAAATGTGTGTTCTATTTGAGAGATAGAACTTTGAAATGATACATATATATTTCTATTTCTTTCTAA----GTAAAT-----CATTTC--TATGTTGAATTGTTTGTAT-----TTGGTTAGAAAAATTAC----TTAAATGCAAACCCAAAATAAAGAGAAC------TAATCAAGATAA--TTTTCCAACATTCATCTGAGAGTCATTGTAAAGCAAAATAAAA-TTCATCGGTGTAATTTAACAAATTTAGCTAACTAC--AAAATTACGTTAATGAATGGGAAC---TACTAGCATAGAAGGAATTAGTCTGAAT--AAGAATCTCAATTGCTACTAAAGGATATTTTTCAAATTTTGTTATTATAACTA---TTTTAGATTTCAGAGCATTTGAATTTATGTTTATACAAAAATAACAATAACACAACATTTAAAAATAAATCCCT------------CCTTAAATTA---TTTAG-TGGCATTGCCAATTATTGGGTAGGAGTTTAGTTATTCTCATTGTGGTCCTAGTTTTAAACAGTCAGAGCCGAGTAAAAGTGAACATGAAACAGCAATAGAAAAA-ATTGCAGAAGAAC a score=33683.000000 s hg15.chr7_random 104954 423 + 1057565 TGTCACAGTGAGAC----TGTTAAGTCTTGATTTCCCTGGACAACTTCACTGCATGACTTCTAATATGATTTTTTAATATACCCTTTA------CTGG-ACAATAAATTAAATCATTATCTGAGTAAGAGATATGGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCTCTTTGGTGAACTCGCATATGTTCTCCTCACCCGC--CAGTCACCTCTAAACCGTATTGTT-CCAAGACAACAAACAGAACT----CGAGTGTGT-------ATCTTTAACCACTGGATTTGTGTTTGC-TCCATAAACTTCACGCTTAATAGGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGGCCTTCTTCATATGGAATTATGGGTGATTTCCTTCAATCTGCATCATATGAAGTT-----------GAGATTCATG-------------TTGATG--AAAAGTAAA s mm3.chr11 108090277 448 - 122862689 TGTCACAGCAGAGTGATACATCCAGCCTTAATTTACCAGGACATGTTAGTGAAAT--ACTTGACTTTAATTTATAAATAAGCTCCATAAACTGTCTAGTACTATACATGATATGGTTATTGCTGTAACAAATA-----CTGAAGAAGCATTGGC------------TATATTTGATGAACTAGCAAATGGGATCATTTTTTACCACACCCATTTCT-ACCCATATTATTAAAAAAAAAACAAATAGCACACTACCTACTGTGT----TGTATATTTCACCATTGAATTTGCATTTGCTTAATTATGCTTAATACTTAA-AGGATTTCTCCTAGT-TGTTTTATATTTAAGATTTAATAAACTATCATAGGTTTTATTAGTATAG-ATTATGTCTCACATTCTTCAGTCTACTTCACTTCAAGCTTAAAATGCATGGAAGTACATGTAAAGAGCTAATTTTAATACCAAGAATAAA s rn2.chr14 16148231 439 - 107821284 TATCACAGCTGTGCTGCATGTCCAGTCTCAGTTGATCAGGACATGTTAGTGATAT--TCTTGCATTTAATTTACAAATAAGCTCCATAAATTGTCTAATACTATAAACGATATGGCTATTGTTATAAGAAATG-----GTTAAGAAGCATTGGC------------TATATTTGATGAATTAACAATTGGGCTCTTTGTTTACCACACCCACCTCT-ACTCATGTTGTT-TGAAGACCACAAATA---------CCGCTATGTAGTATATATATTTCACCATTGGATTTGTCTTTTC-TAAATATGTTTAATACTTAA-AGTATTTCTCCTAGC-TGTTTTCTATTTAAGATCTAATAAACTATCACAG--TTTATTAATATAG-ATTATGTCTCACATTCTTCAATCTACTAAAATTCAAGATAAAAATGCAAAGAAGTACATGCAAAGAAATACTTCTAATGTCAAGAATGCA a score=1939.000000 s hg15.chr7_random 105385 119 + 1057565 TGAAAATATCAGTAAGTATGCTTTCCCCTCCTT--TTTAGCACCTGTGCTTG-------------------------TG-ATACAAGCACA--------TTTT----------------------------------------------AATACAATTGTAGTCTCATGCTTTGATAATTCCTATGATGAAAATAACATTT s mm3.chr11 108091004 132 - 122862689 TTAAATTA-----AAGAATGCATTCATTAGATTATTTTAT---GTGTAGTTG-------------------------TGAACATCATTCCA--------TTTA----------------------------CTCAGTATGTTGAAAGACATTACAATTCTAATTCCAAGATTTGAACTATTATAGAATGACAAGTATATTT s rn2.chr14 16148920 193 - 107821284 TTAAATTA-----AAGGATGCATTCATTGCATTAATTTAG---GTGTAGCTGCAATAGGAACAATTAAATAATCAAATGGACACAAGGCGACAGATTGTTTTACGTGGAAGTATACTGTGAGTAGAATACCCTCAGTATGTAGAAAGATAAAACAATTCCAATGATAAATTTGGACCTGTTATAGGATAACAAGTATATTT a score=29754.000000 s hg15.chr7_random 105506 385 + 1057565 AGATAAAATATCTGAGTTTTATGAGGACTTTAGTATGTGATGTGATAG----AATATCAGAAGACTATACTTTTTTCTAGTTGTCCGTGCAATTCTATCATTGTTTCATCTT---TACTCCTACCAGAGTAAATTTCCAAAATAGATATGTTGTCATTCTTCCTGTTGTTATCAGTAAATAAGAGAA----ATGAAAGCCTAGAT-TATATAATTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCATTAATGAGA-CTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGAAGATCATATGGACCCATTGTC--AGAAATATTATTATTTATGTCTATATGGACATCACCTGTTCATATTTACATAGAAATCAATG-AGAGCTGattttt s mm3.chr11 108091138 359 - 122862689 AACTAAAGCATTTCGAGTCAATGAGA---TCATTAAGCCATGTGCTAA----GCCTTGGTCAGAATAGAGCCATTTC-A------------ATTC--TCTTTGTCCCATTCT----ATTACCTCAAAACTATATTTCCAAAATAAGCATCATACCATTCTTTCTCTTTATATCAATAAATAAGTAAATAAGGTGAAAAATAAGCTACAAATCATTGTTAGAGATACAAACAGTAGACTATAATTATTACACACTGATGCAATCCAACCAGTTAATTACAGAGCTAACAACTATTCATTTTGAGGAT------AGCTTCATGCCTGTGGAAAACTACCATTTCTCTCTTTCGAATCATCTACTCTT---------ACAGAAATCAACA-GAAGTTCATTTTG s rn2.chr14 16149536 377 - 107821284 aACAAAAGCTTTTCAAGTCAATGAGA---TCATTAAGCCATGTTATGATAGAGCTTTCATCATACTAGACCCATCTC-AGTTTTGTGAATAATTC--TCTTTGTTCCATTCTCATTATTTCCACAAAACTATTTTTCCATAATGAATAC---ACCATTCTTTCTCTTTATATCAATAAATAAGTAAATAAAGTGAAAAATAGGCTATAAATCATTGCTAGAGATGAAAACAGTAGACTATAATTATTACACAGTCATGAAATCTAACCAGATAATTACAGAGCTAACAACTGTTCATTTTGAGGAT------AACTTCCTGCCTATGAAAAACTACCATTTATCATTTTCACATAGTCCACTGTT---------ATAGCAATCAACATTTAGTTCATTTAG a score=72048.000000 s hg15.chr7_random 106209 662 + 1057565 TAAAATACTGAGATCATATAGAAGACAGTGCCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTGTGATGGTA--TCAATATTGT-TGTGGCCATTGGGGAGGAAACCA-TTAGTAAAACAACTAAGTTAAAGCTCTTGCTTTAAACTT--------------TGGCTTTAATTTAACAAATGTTCTATGGAGTGACAGTATGTATGTAACCATGCTATACCCATTCACAGATGCAGTAGAGGGAAGAATTTCTCAAACACAACTGTTCTAAGACTCAAACTGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATATCAGATACAAGAGAATCCCAGGTATGCGATGATAATCAGCAATGGTTGTTCACAAGATACATCAAATCAGTATTTGATTTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTAGACTCTTTAGTAGATAAATCTTATTAGGCTGAGATGTGTTTTCCCCTGTTTTTCCTCAAGGAGATTACAAATTTACAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAGCTG--AAGTTCATCAGTCAATGTGTCTAAGTGTTCACTGGTTATATACCATTTTGTAGTGTCAGCTATCTTTCCAACTTCCTAAATCATCACCTTCA-----TTTGATCTTGTTT s mm3.chr11 108091497 636 - 122862689 TGAAATACTGA-------------ATTATGCCTATGAAACAG-------CAGATTTCAGGCTAAAATGCATGGTGAGAAGTAAATAATATATATGCACATGGGACGAGAGAATATTTAGGAAAACTAATCTGTTAAAGCACTTGACTTAAAATTATTGATAGCCAAAACAATTTCTATCGAATAAGAATTCTCTGGAATAAGGATTTATGCTTATCAATGCTTGTCACCATCACAAATGCACTACGAGGAAAC--ATCTCCCATAAAAGTTCTCT-----------TACCTTGG-CTTAAAA----TAGGTTTTGT-----CTGAGTATTTTAGGTGTCAGAT--AAAGAGGTGTCAGGTATGTCGTGAAAATCAGCAGTTGTCGTTAGCAAAGTACATCATAACAGTATCTGAATTCACTTTTGAATTATGAGGATAAATGGGTCAAATGTTGGCTCATTAATGGATTAATC---TTATGCTGAGAAGTCTTTTCCTATTTTTATCCACA---AGACTTAAGATTGATAAACATCTTCTGTTCTCACTTTATGGTCTTACTAAGCCCAAAGTTATTCAGTTCATCAGTCAGTGTCTTTAAGTGCTCACTAGTTACATAAAGTTTTGTAGTGTTAGCAATTCTTGTAGGTTTCTACATCATCACCAACAATATCCTTGGTTTTGTTT s rn2.chr14 16149913 626 - 107821284 TGAAAAGCTGA-------------ATTACGCCTATAAAACAG-------CAAATTACGTGCTAAAATACATGGGGAGAAGTAAATAATGTATATGCACATGGGAGGGGAGAATATTTAGGAAAACTAATGTGTTAAAGCACTTGACTTAAAAGTGTTAATACCCAAAATAAAGCCTGTTTAATAAGAATTCTCAGGAATAATGACTTA-GTTTCTCCATGCTTTTCACCATCACAAATGCACTAGCAGGAAACATATCTTCATTTAAAATTACCT-----------TAAATTGGCCTTCAAA----TAGATCTAGG-----ATGAATATTTC-----------------AGATGTCAGGTATGTCATGATAATCAGCAGTTGCTGTTAGCAAAGTACATCGCAAGAGTATCTGAATTCACTTTTGAATTATGAGGATAAATGGATCAAGGTTTGGCTTATTAATGGATTAATCTTATTATGCTGAGAAGTCTTTTTCTCTTTGTATACACA---AGATTTAAGATCGATAAACTTCTGCTGCTCTCACTGTATGGTATTACTAAGCACAAAGTTATCTAGTTCATCAGTCAGTGTCTTTAAGTGCTCACTATTTACACATAGTTCTGTAGTGTAAGCAATTCTTGTAGGTTTCTACATCATCACCAACACCTTCCTTGTCTTTTTTT a score=319.000000 s hg15.chr7_random 106924 29 + 1057565 TTTGTTATTGTTCATT------TTAGTCTA-ATTTC s mm3.chr11 108092347 36 - 122862689 gttgtccttgtttttTTAACTGTTACTTTACATTTT a score=32360.000000 s hg15.chr7_random 106953 465 + 1057565 ATCAAAA---------------------GATCA-------CAAT---CTTTTAATTTCATTTTCATTTCAAAGATTAAATGAAACCTACATCGAAATGAGTGTAAGATTTGCATTTGCATTATTTTGCCATCAATTTTCTATCCTCCCTCATGCACATAGAGATC-ATTTCCATGTA----CATGATTTCAAACATCCAAGTGCAG-------------TATTAAAAGCAGTTTTTAAATTATGGTTCTCATTTTCATGATACAA-TTACA--------Atataaacttcctcttgc-----------------------tgat------gtaaccaattaccataa------------acttcat-atcttacaata-aagtgaccgttaa-------------------tcctacagttctgtagttcagaagccttaaatgaaactcacagggctaacatcaagttttgggcagggctgcagtctttc----tgagggctatgtggcagaatctattac-ttgatttttttcagcatccagaggccacctttattctttggaacatgacctcattcttatatcccat s mm3.chr11 108092383 536 - 122862689 ATGAAAATGGAAAGATAGACTCCtattaaattatttaaattaattaaatttGAATTTCACTTAGTTTTCAGATATGAAATTGA-------------TGGATTTTGATTTTGTATCTATGTT--TTTGCCTTTAATTTTCTTCACCTTTTCCTTTACATATAGATGTATATCTATGTAGACCTACATTATCAAAGATCTGAGGACAGAAGCAACTCATAATGTTAAAACCAG-TCCTAGTTGCTGAAATTTGTCTGTATGGTAAAA-CTGTGTTCAGCATGCACAAATGTCCGCATGCGATTTCTAGTACCAAAGTTGATATGATATGGGGGTGACTAATTATGACAAATTAACATGTACACAtcataattctgcataa-aaattatcataaacagtagcataaagtgattttattttatttctagaggttaaaagcctaaaataggattcacgaacttaaaatccagtttttatcctagcggtagcctttccttatggtgcccaagtcagagaatcagcctcgttga--tctttcagtgtctaA-------CTTTAT---------------------------TGCTAA s rn2.chr14 16150568 535 - 107821284 ATGAAAATGGAAAGATAGTCTCCTATTCAATTATTTAA--TAAT---ATTTGAATTTCACTTAGTTTTCAGAGATAAAATTGAATGTA----AGGGTGCATTTTGATTTTGTATCTATGTT-CTTTGCCTTTAATTTTCTTCAACTCTTCCTTCACATGTAGACCTATACCTGTGCAGGCCCATATTTTCAAATATCTGAGGACAGAGGCAGCTGGTAATGCTAAAACCAG-TCCTAGTGGCTGAAATTTATCTCCATGGTAAAGCCTGTGCTCAGCATATACAAAGGTCTACATGCTATTTCTAGCACCAAAGTTGGGGTGGT-----GGTGACAAATTATGATAAATGAACATGTACACATCATAATTCTAtataacaagttatcataaacagtgagataaactgattttattttatttctagagtttaaaagcatgaaacaggacttataaatgtaaaatccgattttcatccta-ccttatcctttcattctggagctcaagtcagagaatcaacct--ttga--tcttttagtatttag-------CCTTTT---------------------------TGCTAA a score=15816.000000 s hg15.chr7_random 107731 346 + 1057565 tatcttaaaagtcagtgat-----gttgagtaatttctcatgccaccacctccaaggttgcctttcttctgccttcttctttcacttataaggaagtttgtcatttcattgatcccagccatttaagaaaatctctctatcatttttctacaaccttaatttcacttgaaatctaatttcacactgccgtgcaacctaacatatttgtatgttagactctgggaattaggacatgaaaatttttgggaggccattctt---tggtctacAGCAGACAAAATCTATTGACCTGCAGATTAAAGCGTTCTTTATTTTTCTGTTTCCCTCTCttaatt----------ttttaaaaataatatGAAT-- s mm3.chr11 108092987 265 - 122862689 tACATTGGATGTGGGCAGT-TTAGGTTGAGT-ATTTCTT--GTTTCCGTCTCC------------CTTCT-TATTTTCTTTTTATTTGTAAAAAAATTTATTCTCTCATTGAG------------------------------------------------------------TAATTTGTTGTTGTCATAAAATTTCATTTATCTA-----TAGGTTCTGGGAAGT----------TATTTTCAAGTGACTATTTTTGCATGGTT-----CAGACACAGCATATAT-TCTGAAGATTAGAATGTTCGTTAGTATT---TTTCTCAATCTCAGTCACTCATAGAGTCTTCAAAATGACACAGACAA s rn2.chr14 16151170 261 - 107821284 tctattTAATGTAGGCAATGTTAGACTGAGT-ATTTCTCAAGTTTCCATCTCT------------CTTCT-TATTTTCATTTTACTTATAAGCAAATTTATTATTTCCTTGAG------------------------------------------------------------TAATTTGCTGGTGTCATAATAT----TTGATCTG-----GAGATTCTGGAAAG-------------TTTTCTAGTGACTATTTTTGAATGGTT-----CAGACACAGTCTACTT-TCTGAGGATTAAAATGTTCATTATTATT---TTTCTTGATCTCAATCATTCATTCAGTCTTCAGAATGACACAGACAa a score=2365.000000 s hg15.chr7_random 108085 20 + 1057565 AGAAAAAGAAAGAAAAAAAA s mm3.chr11 108093260 20 - 122862689 AAAAGAAATAAGAAGCTAAA s rn2.chr14 16154146 20 - 107821284 aaaaaaaaTAGGCAGCTAGA a score=174.000000 s hg15.chr7_random 149221 29 + 1057565 TAGTTGGGTAGAGCACAG--GATGGTGCTCT s mm3.chr7 124937154 24 - 134401573 TAGTTGGTGGTAGTGTGG--GATTCT----- s rn2.chr13 21175026 26 - 105800825 tagccggtgttagtgtggatggtgcc----- a score=7091.000000 s hg15.chr7_random 149250 99 + 1057565 TATTTAATATTCCTTGCAACAGGGGGCAAACCAACGTGTTGGGCAAGAATCCACTAGAAATTTAAGATTACTAGCGTGAGAGTTAGAGTTTTATTTTCT s mm3.chr5 95070820 99 + 149719773 tatatatTATTTCTCGCAACAGGTGATGAACCAACATGTTGGGCAAAAATCCACTAGAAATTTAAGATTATTAGCCTAAGAGTAAGAGttttattttct a score=6542.000000 s hg15.chr7_random 149349 77 + 1057565 AAAGG--AGAGAAGATGGCACTGGGA-----CGAGTCACAGG--GACTCAAGCGTGGGAACCTTG-AACAAAGAATGAGGGCTCTGA s mm3.chr7 124937270 81 - 134401573 GGAGGTTTGGCATGCT-GTGCAGGGA-----CTAGTGATGTGATGACTCAGGCATGGAAACCTTGAAACAAAGAAAGAAGGCTCTGA s rn2.chr13 21175131 82 - 105800825 AGAAATTTGGTTTGAT-GAGCAGGGCATAGTCGAGTCACATGATGACTCAAGCACTGTAACCTGG----AAAGAAAGAGggctctga a score=1333.000000 s hg15.chr7_random 149426 39 + 1057565 GGTCCCCTGCTGTGGAAAAAGAAAAGATGGGCTGTCTGA s mm3.chr6 63009634 37 + 149950539 ggt-ccctgttgt-gaaaaatacaagatggctgctctga a score=203028.000000 s hg15.chr7_random 666551 2050 + 1057565 ACACTGCGTCTGCACCTGGGCCCTCTGTCTCTGGGGACACTGGGGTATTTTCATGTCTTTAAGTGTGTGCGTGTGCCCTTGCATGTCCAAGCATGCTTGCTGCGTGTGCCTTGTGTCTTTCACCACATGGTGGGCGTGTGT----GCATT--------------ATCAGTAGCTCTGTATGGAGGGCTAAGTGTCAGCTTCTTGGTCACCATGGTTCTCATAAGCACACCTGTGCCTGCATGTCACACATGGGCTTAAACTGTGTCGCCT--GAGTCtgtg--tgtgtgcatgtgtgtgtgtgcacctgtgtgtgtgtgAAGAGGGGACTGCAGTACCAGGGC------AGTATACACAGAGCATT---CCAGTTCAGTTATTTCATACTTATAATTAAATAATAATACTTATTAAGAG-AAATTTTAATTGCAAAGTATTTTACCATACAGCTGAAGGTCCCAGAGATGAATAAGGGAAACTTGAAGATAACCTA-ACAGCCTACATAACTTATTGATTACTTCTCTTCAAAAGAGAAGCTGCAACCCGAAACGCATACATGTACGTATTTATAACAGTCTCCCTGGGCAAATGAAGTTGTCGGTGGGTTGAACAGTT--CACTTCATATCTTCAAGTGCAAACTAGAAC------CTTCTCCTGTTGTTTCTATTAGTAAAAGACAAATTAATTTTAAAAGTTCATGCCTGCGATGCAC--TTGCTTTCAGAGACCCTCTTTTC--AATCAAACCTAACTTCTAGTCACTCACTTTCTATATGCTGTAATCTGCACAAGCTATGCAATTTTTGAAATGACTTATATTTATGGCTTTATAAAGCTATGCCCCTTTTTGAAATGATTGATATTTCCAGCCCAGAGCATGGCATTTTAG-AATATGCTCTGTTCTCTGTTGATCAGGGGATCATGGAGGGTTCCCAGTTTCAGCTAATGAGGCCAAGGTCAACCCACAGGAGAGAAAACTGCTCCCTGGCCACAGACTGAACCACCAATTCTGGCCAACCGCCTCATAAACACAGGCCCAGGTCATAATGGGATCCAGATGGAGGAGTGTGGACAGTCACAGCTGACATTCTACTGACCGT---------GACTCAATGGAACACAGCTTG-GGGCAGGGCTAGGACTGGTGCTAAGGTCTCTGGTTTCTCCTTTCAGAGCCTATTTCTTTAtagcagtggtgggatttgaaactaggctctgaaagactggagcttcagaactgagccttagaGACAGCAAGGTCATTAAACAAAAGAAAGAAAAATAAACAAAAAGCTATTCCCT-CTAAGTCAATTCTGCAATCAAAGCATCGGAAAAGTTAAATGCACTAACAATGTCCACATTCATACTATCGGGGGGTAGAACCCCCCATTATAATCTAGGGCCTCATCCCTTCATTCCTGAGTAACAACA-GTTGTCTCCTAGCCTCTGGCTCTCAAAACATCCCCACAACTTTTTTTTTTCTTTGCCA--TTCCAATTGATTTATACCATCATTAATTTTCATTAAACTTCTCCTTTGTTCCAGAATTTACAATGGCTCCCAGCTCTGGCACTTTGGCTCAACCCAAGCCCCTCAAGCCTGTATTCAAAACTCTCTATTGTCAGGCTTCACTCACC-GGATTATTATTTTCCAGTACAGGCCTTCGACTCCCGCCAGGTGTCACTGTCTAAGGAGTCACCATCATTTCTCCCATCTTCCCTTATTTATTCCAGTCTCCA---------------TGACCCCTAGACTTCCCCATCC----------------------------CTATCTCATGT-TAACTTCCCTGTTAACCCATCTGGCAAA--A-TCTTTCACTGACTTTT----AATTTCTTGAACTGgctttgctcatcattgtttcc--ctagagtctggcagaaggtaggttcacaataaatctctgttgaatgaCCAAACATTTAAAATATTGAAGCATCAGAATGACAGTCTTGGCAGTTGGTTTGTGTTTtccatctcctcaaagagactgtgaactctgcaagattagggatcatgccttaccctctgcactctggagcacatatctactacgggacactcagtaatgaatgtttg-----atgaattgaactgaaAATTAATCTCCACCC s mm3.chr6 38796753 1935 + 149950539 ACACAACGTCTGTATCTGGGCCCTCAGACCCCACAGACACTTGGAAGGCTTC-TGTTTTCTGAGGTGGATGGTCACTTCTGT-------------CTTGA-ACATATACA-TGTGTCCTTCCTTAAAT-GTGTGCTCACCTGCAAGCATTCTCTGGCAATGCACATCAGCATCCCTGCAGAAAGAGTTAAT-------------GCCACCCT--TTCTCACAAGCACACCCATAACTGCATATTGTGTATGGGCTT-CACTGTGCTATGTGTAAGTCAGTACTTATGAGCATGCACAAGCCCTTACTCTCTTGTTTTTGGCAAGG---TTGCAGCA-TAGAGCTACTCAAATACATGCAGGCTACC---CTGGA--AATTACCAAGTAGTTATGAGCATGAATTAGTAATTCCTGAAAGAAAAGACTAATTTCAAAATG-TATACTATATAACCGAAGGTCACAGGG----ACAATGGAGATTTGAAAA---GTTA-CCAGCCCAGTTAACTTATTGATCACTTTTTTATAGAAACAGAGCAGTGGCTCTGCTTGTTTCCACATGTGTAT------GAGTT------GGCAAATGAGACTGTCAGTAAGCTGGATAGTGT-CACATGCTATGCTCCAATGTGAGCCTGCACATACCTCTCCTCCTGCTGTTT-TAGTTCCAAACGGCAGG-----TTTAAGAGCTAATGCTTGCCATGCATAACTGTGTGCAG-GTTCTGTTTTTC--AAGTG------------AGCCAGTCACCTTTTAAATATTATGATCTGCATAAGTTATACCATTTTTGAA---ACTTCTGTATGTGGC------AAC----ACCCTTTATTGAAGTGACTTAGACCTTCAGTCTACAATCTGGCAGTGTGGAAATATACCCTGTTCACAGTTCAT-GGGAAACTAGGAAAGGTTCCCAGTGTGGGTCAATGATGCCGGAATC-ACCCACAGGGGA-AAGACTCCTTCCTCCACACAACTAGAATCTCCAACTATGGCTCACAACCTGGTGAGCACAAGTCCTGCTCACAACAGAATCCAGATGGAACAGTGCAGG----------TGGCTCACTGCTAACAGT---------GAGTCAGGGAAACGGGTGGTGAGGGCAGGACCAGGACTGAGGCTGAGG---------TGACCTTCCAGAGACTATTACTTTGTAGTGGTGGTGGGATTTGAAACCAGGCCCTAGCAGACGAGAGTTTCAGAATCCAACCTTAGAGAGAGCAAAGTCACCAAGCAAA--AATGAAAAACAAACCCCATACTGTTCTCTGGTAAGTCAGTTCTGAAGTC-AATTATCAGAAAAGTCAAGCTCACTAATGG-GTCCACAGTCAGACAAC---GGGGTGGGGTCACCA--TATAATCTAGACCCTC-TGTTTTCATTCCTGAATT--AATACGTTAT-TCCTGGACCTTGTGTCT---------CCCATCAACTTTCTGTCTATTTGCCTTTTTCCAACTGA--TATATCATCACTAACC------------------TCCTCAAGAATTCACAGACGCTTCCAAC-ATGTTACTCTGACTAAACCCCAGCTCCTCATG-CTGTAGTCAAAACTCCCTACTGTCAGAGCTCACACCTCTATACCACTATGCTTCAACCCAGCCCTTCAACCACTTGCACA----ACT-------------CTTTTGTTTCTCCCATCTTCCTT--TTTATTACAACCTCCA---------------TGGCCTTTACCCCACCTCAGACTTCCCTGAAGATCTACCTAGAGACCCCTTCACCACAGGT----CTCTCTGGTCAGCCCATCGTGCAAAAGACCCCTTCACTGACCCTG----AGCTCTGTGG--CGGCTTTACTCACGTCTGCTACCCACTTCCATCTGGTACATAGTGGGTTCATAGGAAGTGTCTGTTGAATAATCATACACTTGGAATACC-AAATTTCAGAATTATATTTCTAGGAACTTCTCTTTAAAT--------CTGAAAGAGACAATTAACT---TAAAATTTGAGAATGTACCTTTCTTCCTATACCA-TTAATAGGTAGATATTCAGAGCTACTCAATCAT---TGTCTGACATAATGATTGGAACT-AAAATTAATTTCCATCT s rn2.chr4 63540521 1923 + 183307734 ACAC--TTTCTGTATCTGGACCCTCAGACAGCATGGACACAGGAAAGGCTGC-TGTTTTCTGAGGTGGACGGTCATCCCTGT-------------CTTGA-GCACATGCA-TGTGTCCTTCCACATAT-GTGCACTCCCCT-----CCTTCTCTGACTATGCACATGAGCATCCCTGCATAAAGGGCTAAC--------------CCACCCT--TTCTCACGAGCATACCCATGCCTCCATATCACAGAAGGGCTT-CACTGTGGTACTT--AAGTCAGTGTTCATGAGCATGCACCAGACCTTACTCTCTTGTGTATGGCAAAG---TTGCAGCA-GAGAGCTGCTCAAATACATGCAGACTATCACACTGGG--AGTTACCAGGTACTTATGAACATGAATTAATAATTACTAAAAGAAAAGACTAATTTCAAGATG-TATACTATGTAACTGAAGGTTGCAGAG----ACAATGGAGATTTGAAAAC-AGCTAGCCAGCCCAGGTAACTTATTGATCACATTTGTATAGAAACAGAGCAGTGGCTCTGCTTGTTTTCATGTGTGTATT-----AAGTT------GGCAACTGAGACTGTCAGTAAGCTGGATAGTTTTCACATACTATCCTCCAGTGTGAGCTAGCACATACCTCTCCTCCTGTTGTCT-TAGTAACAAAGGGCAGA-----TTTAAGAGCTAATGCTTGCCATGCGTAGCTGTTTGCAGAGTTCTGTTTTTTCAAAGCA------------GGCCAGTCACTTTTTAAATATTATGATCTGCATAAGTTATACTATTTTTGGA---ACTTCTGTATGTGGC------AACCAATACCCTTTATTGGAGTGACTTACACCTTCAGCCTACAGTCTGGCAGTGTGGAAATATGCCCTGTTCACAGTTCAT-GGGAAACTAGGAAAGGTTCCCAGTGTGGGTTAACAATGCCAGAGTC-ACCCACAGGGGA-AAGACTCCTTCCTCCACACAACTAGAATCTCCAAC-------------CTGCTGAGCACAAGTCTTGGTCACAACACAATCCAGATGGGACAGTGGGGG----------TGGTTCACAGCTAACAATCTACTCAATGAGTCAGGAAAACAGGTGGCG-GGGCAGGACCAGGACTGAGGCTGGGG---------TGACCTTCCAGAGACTATTACTTTGCAGTGGTGGTGGGATTTGAAACCAAGCCCTAGCAGAGCAGAGCTTCAGAATCCAGTCTCAGAGAGAACAATGTCACCAAACAAA--AATGAAAAACAAACCCCATAGTGTTCTCTGGCAAGTCAGTTCTGAAATC-AATTATCAGAAAAGCTAAATGCACTAACAG-GTCCATAGTCAGACTAT--GGGGGTGCGGTCACCA--TATAATCTAGATCCTC-TGTTTTCATTCCTGAATA--AATA-GTTAT-TTCCGATCTTTGTGTCT---------CCCACCAACTTTCTGTCTATTTGTCATCTTCCAACAGA--TATATCATCACTAACC---------------ACTTCTTCGAGAATTCACAGAAGCTTCCAAC-ATGTTACTCTGACTACACTACAGCTCCTCACG-CTGCACTGAAAGATCCCTACTGTCAGAGCTCACATCTC--TACCACT-TGCTCCAACCTAGGCCTTCATCCACTTGCACG----------------------TCTGTTTCTCCCATC-TCTCT--TTTATTGCAATCTCCACAGCCCCAGATTTCCCAGCCTTTATCCCAGCTCAGAC----------------------------TCACTACAGGTCTCACTCTCTACTCAGCCGATCATGCAAA--ATTCCTTCACTGACCCTGAGCTAGCTCTGTGG--CTGTTTTATTCACTTCTACCACCCACTTCAATCTGGTAGACAGTGGGTTCATAAGAAGTGTCTGTTGAATAATCACACACTTGGAATGCC-AAATGTCAGAATTATATTTCTAGGAATTTCTTTTTGAAT--------CTGAAAGAGACAATTAACT---AAAAATTTGAGAATGTTCCTTTCTTCCTATACCATTTAATATGTAGATATTCAGAGCTACTCAATCAT---TGACTGACATAATGAATGGAACT-AAAATTAATTTCCATCT a score=10446.000000 s hg15.chr7_random 668988 64 + 1057565 CCACCTAA-AACCACCATGAAATCAACTTGAAGACAGTCTTTGCACCCCAAAGAATCAGACAAAA s mm3.chr6 38798688 65 + 149950539 CTACCTAACAACCATTCCAGAATCATCTGGAAGATAGCCTCTGCACCCAAAACAATCAACTGAGA s rn2.chr4 63542444 65 + 183307734 CTACCCAGTAACCATTCCAGAATCATCTGGAAGACAGCTTCTGTACCCAAAAGAATCAACTGAAA a score=575.000000 s hg15.chr7_random 669355 33 + 1057565 GATTATTCTGAAAAAGTGGATTATTTGCTATTT s mm3.chr6 38798753 32 + 149950539 GAGTATTCTTAAAAA-TCAATCTCTCTCTCTCT s rn2.chr4 63542509 18 + 183307734 GAGTATTTTAAAAAA---AAT------------ a score=82868.000000 s hg15.chr7_random 669388 772 + 1057565 TTCATGTCCTAATTTTTTATGTTCAATTTTTGGG-TCCTGGTAACAGTCCTACGTGTTTCAAAAAACTCTAGACAAGAATATTTTGAATAATCCAGAGTAGAAACCAAAAAAAATCTATATATTTTAATCACTGATTACCCTTTGCCTGAATG-GCATGTCTTTTTGTTTGTGTTTTTTTCTGAGAGTGGAGTTTAACATTTGGTCTTATTTGTAGTTTACTGGTTCTGCTGATAATGGAAATACCCCAGTACCAATTTATTGCTTGCTCAAAAAAAAAACAAAAAAACTAAAAACAAACAAAATGAACTGGCATCAATGTAGAATTAAATAACAAAAGGGCAGGGGCGCCCAAGGTGAAGTAATACAAGCA---AGGATTACCTGCAACTCTGTTCTTTTGGGTGTCAACACCTGAAAGGTGACACCATTAAGAAAATCCCTCTGTCCTTCAGAATAGTGTTTCTCAAAGACTGGTCCTAAGACCCCCTGCCTGGCTCACCTCCAGTTCTCTGAGGCAAGTCTCT--GTGGTGGTGGGTGTGGA--------CTTTCTCCC-----AGGGTAC----TCCCAGGGAGA-------------CtctgttcccagcaacctctccaggagattcctgtgcacagtaaagcctgagaaccTGGGCAGCTGACAGTTAATGACATAACTGACCTTC------------GAATTGGAAGGGA-----ATACCCCTGCTTCAGACTCGAGAAAAAAACTTAAAAAGCAGCCTTTGTTTCCTGAAAAACACACCAGTGGGCTTGCCTCACAGAATACCAACAGCCACTGTGG------ s mm3.chr6 38798959 738 + 149950539 TTTATGTTCTGG-TTTTTATGCCCACTTTTGGAGATCTTATCAATGGTCTTAAAGGTCTCAAAAAAGTCTATACAA-AATATTTTGAACAGTCCAGAGCAGAAAC----AAAACTGTACACACTGTCACCTTTGACTATCTTTTGCCCAACCGTGAATTTTTCATGG--------TTTTTCA-------GAGTTTAATGTTTGGTCTTGTTTTTAGTTTGCTGGTGATACTGACAGCAGAAATACCCTAGTACCAGTTAACTGTTTGCTCAAAAA-------------CCCAAACT------------TTGGCATCAATGTAGAATTAAATAATGGCCTGGCAGGGACTTCTTTAGTGAGGTAATACAAATAAACAGAACCACCTTCCACTGTGATCTTTTG-------CCACCTGAAAGGTGGCACCTTGGAGGAAG-CCTGCTCTCAGCTGGAACAGGGTTTCTCAAGAAT---CTCtagg-----------------------gtagcgtagggtagggtagggtagggtagAGGATGCGAAAGA-----CTGTGCCCCACCAGAGGGCACAATAGCTCAGAGACAGGATCTAGCATAATTCTGTTCATA-TAAGCTCTCCAGG---TTCTTAGGTATGAGAGAGCTTGAGAAGCCGCACTGCTGACAGCTACCCTCAGAGCTGACCTTCAGGACGTAGGTTAAGTCGGGAGACACTCCTATACCCCTTTATTACACC---ATAAAGACCTGACAAAGCAACC-CTGATTCCTTAAAGCCACA-TATCAGGCCTCCCTCACAGAATGCTAACAGCAGCTCTGCGGTAGG s rn2.chr4 63542724 733 + 183307734 -TTATGTCCAAG-TTTTTATGCCCCCTTTTGGGGATCTTAGCAATGGTCTAAAAGATCTCAAAAAAGTTTATACAA-AATATTTTGAACAGTCCAGAGCAGAAAC----AAAATTGTACACACTGTCACCTCTGACTCTCTTTTGCCCAACAATGAATTTTTTGTGGTTTTTTTTTTTTTTT-------GAGTTTAATGTTTGGTCTTGTTTTTAGTTTGCTGGTCATACTGACAGCAGAAATACCCTAGTACCAGTTAACTGCTTGCTCAAAAA------------GCTAAAACC------------TTGGCATCAATGTAGAATTAAATAATGACCTGGCAGGGACTTCGTTAATGAGGTAACATAAGTAAACAGGGTCACCTT-CACTGTGCTCTTTTG-------CCACCTTAAATGTGGTACCTTGGAGGAAG-CATGCTCTCAGCTAGAACAGGGTTTGTCAAGAAT---CTCTAGG-----------------------GTAGAGTAGGGTAA--------AGGGCAGAGACTGTAAATGAAAGGCCTCCTCCCCCACAGAGGGCACAAAAGCTCTAGGACA-GATCTAGCACAATTCTGTTCATA-TAAGCTCTCTAGA---GTCTTAGGTATGAGCAAGCTTGAGAACCAGCACTGCTGATAGTTACCCTCAGAGCTGACCTTCAGGAC-------AGGTTGGAAGACACCCCTACACCCCTCCATTAGACC---ATAAAGACCTGACAAAGCAACC-CTGTTTCCTAAAAGCCACA-CATCAGG-CTTCCTCACAGAATGCCAACAACAACTCTGTGGTAGG a score=147581.000000 s hg15.chr7_random 670160 1662 + 1057565 CCAGGCACATGCCTGAGAGCTGGGGAAAACAGTTGGCTCCGGGGACACCACCTCCTTTTCCAAGTCCCCAAGGC-GAGGATAACATATCCTTGTCTCACACCGTTTCTGTGT-----------CACTAGGTGGGGACAATGGTGGGATGAGACACTTAGCCCAGTCCCATGCAAAATGACAGAGGGACACATAAGTACTCTACCTTTTGAAAGTCAGATGTCCTGGGACGATAATG-------TGCCCAGCTCAGATACAGGGGGCCGAGGGGAGAAAGTCCCCACCCACCACCTGCAGGACAAAGGCCAACCTGCTGGGAGGCTGGATGCACAGCATGCAATGACTCCTCCAGCCCAGGCGGCTCAAACACACAGCCATTCCCTCACGATGCAGATGCAGCTGAAAGCATCTGAAAGCGTCTTCTTTCT-GGGACATGGGCCTTAACGATGGACAATTAAAGAGCTTTTCTTGCCCCCTTTCTTTCCTATAAGAGGCAAAGCCACCAGGAAAATCAACTTGATAAACATGGCCTAGAGCTGGCTGTCCCACACAGCTGGGACGAAAAGAGACAGAGCACTAGAGACTGTCCTCGAAAAATCGGATCGATCTATATGGT----GGCAAACCACTGCAGGGCTCAGACAAGGCCTGAGGGAGAAACAGAACATTGCACCAACTTAGAAATGAAGCC-TCATTTCAGGCAGAAGAGCCGCTGTCTTTCC--------TGCTGACCGTATTTTTGGAACCAGGGCTGGGCACAGGGAGGCTGACATGAGGGCCTGAAGGTGACCACAGAAAGGAGAAAGAGGCCTTCTTGCTCAGAATTTTAGGCAATGGTGATTTCAGGGGTGAAAAGAGGGTACTATCACAACTAAACGGAGGGTCCTTCAGAGGGATGTGGGGACACAGGGGCCAGATGTGACTGTGCCTGTCACGAAGTGGGGAAAAGAGGGCTCCTGAGGGCCCAGGAACCGCCAGCAAACCAGCCTACCACACCCACCAGAGGCGTCCAAAAGGCCTGATCTCACCCACAGAGGGGGGCAGGAGAGGATCGCTGTGAGTCCAGGTGAAGGAGTCAGCCCT-CCCCAACCCTCACAGGCAAACTTTTACTGCTG-CCGCAGGCTTCCTGAGCTAGGATCCCCGATTTTGCGACCTGTCTCCTCAGCACTAGGGGCACCAGCACCAGGCAGGAAAGCAAAGAAAAACTCGCAGAGTCCAAGGGGATGGGCAGGGAGGGCTC----CAGGAAGCGTCACATGGGCACCAGAAGGCAAGATGACAAGGGGGTCTTAAGAATCCCCAATTCAGCTTACTCGATTCACCAAGTTTCGCTCTAAGGATGTGCTGCCTTTTAAACAGAGTTTGTCGAAGTCTTTTTACAAGTCGCCATG-CTAGCTTTCAG-TGAATGTTAATAACACTGGTACGTGTTCATGATGCAGCAATTCAGATGAACTA---CATAAAAGCCCTAGCAGCCA--AGTCAGGGGCTGTTCACCCTGAATTCAGGCCAAGAACTAGAAAGAGCCAGCCTTTGGCATGCTGAATTTACCAACCTAAATACGAAGTGGCACAGCAGCCTCC------CAGA-GCCAGCACAGCA----CCAGC--TAGCCCCCAATGGGGCTGG-----TACCCGGGACGGCCACCA--GAGCTGGCTTTCAGA----GGCCCAGGCACTCTCTACAGAGAATATGTGCTGTCGG s mm3.chr6 38800400 1494 + 149950539 CCAAGCACATATCTAGCTTCTAGGAAAAATAG-TGGCTTCCAGGCCACCACCTTCCTCCCCACATCCCTCAGGCTGAGAACAGGAAGTTC--ACTTCATATCACTTTTTTTTTTTTTAAACCATACCTGATGGGGGCCATGGGAGGA----GCACTAAATATAGTCCTGTTTAAAATGATAAAAGGACA---AAGTATTCAACCCTCTTAAAGCGGAGTGTTCC-------TAATG-------TGCCAGGCTCA-AGACAGGGGGCT--------------------------------------------CCTG-GGGAAAGATGGACCCAGAGCACATAATGACCTCTCT-GTCCAGGAAGCTTGAAAGCAC--CCTTCCTCTCTCGA------------AAAAAGTCCCTGAAGGTATGCTTTTTTTTGGGATAAGGACCTTAATGATAAATAATCAAAGAGCTTCTCTTGTCCACTCTC-CCCAAGTAAAAGGTAAAGTAGGCA-GGAAATCA-CCTCAACAGTTTCATCTAG-GCTGACTGTCCTACACAGC-AGGATGAGCAGGGTCCAAG--CTGAATGCTGTGCTCGTAAGCTTCCGCTGGCCTATGTAGCAGGAGACTGACCACTCCGGGGCTCAAATGAGGCCTGCGGCAGGCAGAGTACTATG-ATTAATTTAGAAATGAAGTTATCATTCCAGGACTCTGTGCCCTTGTCCCTAG-CGAAAGTTGCTTAGCTGGCCTTGAGAACCCAACAC---CATGAAGACGGGGGCAGGGGG---TGGGGGTG----------------GGGGGTCATTCTGCCTAGAATTTTAGGTATTAGTCACTTAAGGCCTAAAGAAAGGGAGTACT----------------------CAGATGGAAGTGGGAATGCAGGAAGTAGAGGTGACTGTGCCTGTTGACAAATGAGAATGACAAG-----TGGGGAGCTCCTAACTGTAATC----AGCCTTATCAC-CCCAT--GAGGTGCTCAAATGGATGG--CTGGGCCATAAAGCTG-GTGAGAAAGGACATC---AAGTCTAAGACGAGGATTCAGACCTGCCCCAGTTCCCATGG---AAATGTCACTGCCATTCATAGGCCTCCTGAGCTAGGGTTCCT------------------------------------------------GAAAGCAAAGTACA--CTGCAGAGTCC-------TTGGCAGGAGGGGCACAGAGTGGGCAGAGTGACAGGGGCA-CAGAGGGCAGGAATACAAAACAGGCTTCAGAGTCCCAAATGTAACTT-CTTGCGT---CAAATTTTGCTACAAGGATGCAATGCTTATTAAATATAGTTT---TAAGCCTATT-ACAAGCCTCCATGGCCAATTTTTAGCCAAACTTCAATGAAGC-------TGTCCACTTAG-AGCAATACAGGTTAACTAAATAATAAAACCTCACACAGCCCTTGGCTTGGCACAGTTTGCCCTAAATTCAGACCAAGAACTGGCAAGAAATAGCCATCGGCATCCTGAATTTGTAAGTCTAAATATAAAGTGACAGGAAAGCCTCCATTTTGCAGT-AACTACAGAGCAGGCCCCAGCAAAAGCCGCCTCTGGGGTAAGCTGTTTCTCTATGATGAACCATA--GAGTTGCCTTTCAAGAAAAGAGTTAGTCACTCTC--CAGAGAATATGGGTTGTCAG s rn2.chr4 63544302 1498 + 183307734 CCAAGCACATACTAAGCTTCAAGGAAAA-CAG-TGTCTTCCAG-CAGCCATCTTCCTTCCTATGTCCCTAAGGATGGGGACAGCAAATTC--ACTTCCTATTACTTTTGTTT------AACCATACCTGATGGGGGCTATGGGAGGA----GCACTTAACACAGTCCTGTTTAAAGTG-TAAAAGGACAGA-AAGCATTCATCCATTTTAAAGTAGAGTGTTCC-------TATTGGCAAATCTGCCAGTCTCC-ACACAGGGGACT--------------------------------------------CCTG-GGGAAAGACTGATGTAGAGCAAGTAATGACCTCT---GTCCAGGCAGTGTGAAAGCAT--CCTTGCTCTCTC--------------AAAATGTCTCTGAAAGTATGCTTTTTTA-AGGATAAGAATCTTAATGATAAATGATCAAAGAGCTTCTCT-GTCCACTCTC-CCCAAGTAAAGGGTGTAGTTGG---GAAAATCAACCTGAACAGTTTCATCTAC-ACTGACTGTCCTACACAGCCAGGATGAACAGGGTCAAAG--CTGAACGCTGTTCTTATAAGCTTCTACTGACCTATGTGGCAGAAGACTGACCACTTCAGGGCTCAGTTGAGGCCT-TGGCAGGCAGAAAATTATG-ACTAACTTAGAAATGAAGTTATCATTCTAGGACTCTGTGCCCTTGACTCTAGTCGAAGGCTGCTTAGCAGGCCTTGAGGACCCAACAC---CATGAAGACCCTGGCAGGAAG----------------------------GAAGCCATTCTGCCTAGAATCTTAGGTAGTAGTCACTTAAGGCCTAAAGAAGGGGTGCCCTGACACCCAAA---AAGGTGTCTCAGATGGCAGTAGGAACGCAGGAAGTAGAGGTGACTGTGCCGGTTGAGAAATGAGGCTGACAGG------GGGGCGCTGCTAACTGTAAACCAACAGCTTTACCAC-CCCAC--GAGGTGCTCAG-TGGACAA--CTGGGCTATAAAGCTG--TGAGAAGGGACATC---AACTCTAAGA---GGATTCAGACCTGCCCCAATTCCCATGG---AAATGTCACTTCCATTCATGGCCCTCCTGAGCTAGGGTTCCT------------------------------------------------GAAAGCACAGTACA--CTGGAGAGTCC-------TTGGCAGGAGGGGCACACAGTGGGCAGAGTGACAGGGGCA-CAGAGGGCAGGAATACAAAACAGGCTTCAGAATCCCAAATGTAACTT-CTTGAGT---CAAGTTCTGTTACAAGGATACACTGCTTATTAAATATAGTTT---TAAGCCTTTTTACAAGCCTCCATGCCTAGCTTTGAGCCAAACTTCAATGAAGC-------TGTTCACTAAG-AGCAATACAGGTTAACTAAATAATAAAAGCTCGCAGAGCCCTTTGCTTGGCACAGTTTGCCCTAAATTCAGGCCAAGAACTGGCAAGAAATAGCCATTGGCATCCTGAATTTGTAAGTCTAAATATAAAGTGACAGCAAAACCTCCATTTTGCAGTTAACTAGAGAGCAAGCCCCAGCAACAGCCACCTCTGGGGCAAGCTGTCTCTCTATGATGAACCATACAGAGTTGTCTTTAAGGAA--GAGCCAGGCACTCTC--CAGAGAATATGGGTTGTCAG a score=19396.000000 s hg15.chr7_random 673441 273 + 1057565 ACCACTCACAAA----CTGTTCTGGCCAGGCGGGTGTCCTTCTTGTCTCCTGTA-AATTCCCAC-TAGTGTGACTGCG-GACTGTGGATGGCACATCCCTCTCTCTCCACCACCTGTCTGGATCCTACCC-ATCCGGGAGGACGGAACTCTTCTGCTCTGCAC----CCCAGGTCCCAGGGAGCCCTTCCAACGCTGAACACCTGTGCCACGG--ATCTTACCTGGCTCCGTTCTAATGTGACTTCTAATTGACATCGCAATGTGCACATGTCCTAATTT------------CGTAAGT------------- s mm3.chr6 38803262 281 + 149950539 ACTATTCACAAATCTTCTGATCTAGCCAGGTAG--GTCATCCTGATCTCCTAAACGAGCCTTGCATTTTGCTACCCTGTGCCTGTCACTGGCAC---CCCCTTCCTGTTCTAGCTGAATGGATCCTCTCC-ATCAAGAAGGACCTGACTTCTCC------------------------AAAACTCTTTCCAACTCTCAATGTCCAGACCAAGATTATTTTACTCAGCTGC-TTCTCAGATAGCTTCTCGCCATCCCTCCAGTCTGCATGTATTCTAATCTTTCAACCATATACATAAACAAAAAGTCTCTTt s rn2.chr4 63547250 295 + 183307734 ACTATTCATAAATCTTCTGATCTGGCCAGGTAG--GTCATCCTGATCTCCTAAATGAGTCCTGCACCTTGCTACCCTGTACCTGCTATTGGCACA--CCTCTTCTTGCTCTAGCTGTCTGGATCCTCTCCCATCCAGAAGGACCTGGCTTCTCCGCTCTGCTCTTTACCCAGCTCCCCAAAGTCCTTTCCAACTCTCAGCGTCCAGACCAAGA--ATGTTACTCAGATGCCTTCTTCGACAGCTTCTCACCAGCACACCAGTCT-CATGCCTTCTCATTTTTCATC-----ACATCAA-----GGTCTCTGA a score=308206.000000 s hg15.chr7_random 673714 1307 + 1057565 ACATTAAGATCACTTGAAGGCAGGAACTGTAGACATATAATTTTATCTCC-CCACAGTGACTAAGGTGGCACATTCTCTGTGAGTGCCACTGGGCATTCAGCAGCTC--CTGTCTCCTTGTGGACGGTCTTACCTGTAATATCTGGACTGCAAGTAGGTGGAGCACACAGCCTTGGACACGTGGCTGGCTGAACCAAAGTCGATGACCTTGACTCTGTATGGTTGTCTAGATGGATCCACCAGCATGATGTTTTCTGGTTTGAGGTCAGCGTGGATAAGACCTAGGCTTTTGAGTTTCATCAGGGCTGTGGCTACCTGCTGGAGAACTGGGCGAATGTATTTGAGGGGCAAGGGGCTAAACTTGTTTTGCTTCAGAAAGTCATAGAGGTTCTGCTCCAACATCTCGAAGACCAAGCACGTGTGGTTCTTGTGCTGGAAGCATTCGTAGGCCCGGACGAAGTTATAGTCATCGGCACTCTCCGTGCTCAACCGGGCCAGGATGCTCACTTCAATCTGACCTTGTCGGGCATAGGATGGGTGGTTCTTCAGGATCTTGATGGCTACGATCTCATTGGTGCCCCGTTTCCAGCACTTGACCACTTGCCCAAACGTCCCTCGGCCCAAGAACTCTAAGACCTCGTAGGTGTTGGTCATGGAGCACAGCACCTCATGCTGCACCAGCTGATAGTCGCCCTCGCTGTTGGAGCCGCTGTTTTTGGAGGTGGCAGTAGACGTGGTGGCAGTGGCGACAGTGGCCCCGCTTGCATTATTCTGAATCATGGGTGGATGCTCCTCGATGATCTGCACGCTGCTTGTGTTCTCGATCTCCTCGCTCTTACGCTTGAGTCCACATTTTTGGTAGGTATCAAGGAGGCTCACAGTGCTTCGACGCATTAGGTTGTGTGGTCCGCCGAGGACTTGCCCGGTGACAGAAGTGCTGCTTGCTGAGGTGACCACGATGTGCCCGGTGCTTCCTGGGAAGACGATGGTCTGCTCGTAAGGTAGGCTTGGGTTTGGGACCGGCAAGGAGGTGCTGACGGTTGTGGTGGCTGGCTGCGACAGGGGGATGTTCTTGCTCTGGCTATACACTTTGCTGTGGGAGCCGTACCCAGTCATGTCCCAGTTGGAACTCGGCTCTATTTTCAGTTTCTTCACACTACAGAAGGCACTTGATTGAAGGGTGTGAGGGGAGAAAACTTGCACATGTGAGGCCATACCTACAAGGAAAGGAAAACGAAAAGTAAGTATCGGAGTCACCTTGGTACAAGTAAACTCAACAGATCCCCTTCAGTTC----------TCATCTGTG------GCTTGGG s mm3.chr6 38803750 1309 + 149950539 ATATTACGGTCTCTGTCTGGTAACAACCATTATCA-------TTATCCCCACCATGGC------CTCTGCACATTCCCTGTGGATGCCACTGGACCTCCTGCATCCTGACTATCTCCATGGAAAATGTCTTACCGGTAGTATCTGGATTGCAAGTACGTAGAGCAGACAGCTTTGGACACATGACTAGCTGAACCAAAGTCAATGACCTTCACTCGGTACGGTTGTCTGGATGGATCCACCAGCATGATGTTTTCTGGTTTGAGGTCAGCATGGATAAGACCCAGGCTTTTGAGTTTCATCAGGGCTGTGGCTACCTGCTGGAGGACTGGGCGAATATACTTGAGGGGCAAGGGACTAAACTTGTTCTGTTTCAGAAAGTCATAAAGGTTCTGCTCCAACATCTCAAAGACTAAGCACGTGTGGTTCTTGTGCTGGAAGCACTCATAGGCCCGCACAAAATTGTAGTCATCAGCGCTCTCCGTGCTCAGCCGGGCCAAGATGCTCACTTCAATCTGGCCTTGCCGGGCATAGGAGGGGTGGTTCTTGAGGATCTTAATGGCCACAATTTCATTGGTGCCCCGTTTCCAGCACTTGACCACTTGCCCAAATGTCCCTCGCCCCAAGAACTCTAAAACCTCATAGGTGTTGGTCATGGAGCACAGTACTTCATGCTGCACCAGCTGATAGTCCCCTTCACTGTTGGAGCCACTGTTTTTGGAGGTGGCAGTGGATGTGGTGGCAGTGGCTACAGTGGCCCCGCTGGCATTATTCTGAATCATGGGTGGATGCTCTTCAATGATCTGCACGCTGCTTGTGTTCTCAATCTCCTCACTCTTGCGCTTGAGTCCACATTTTTGGTAGGTGTCAAGGAGGCTCACAGTGCTTCGACGCATTAGGTTATGTGGTCCACCGAGGACTTGCCCGGTGACAGAAGTGCTACTTGCTGATGTTACAACTATGTGTCCAGTACTTCCTGGGAAGATGATGGTCTGCTCGTAAGGTAGGCTTGGGTTGGGGATTGGCAAGGAGGTGCTGACGGTTGTGGAGGCTGGCTGAGAAGGTGGTATGTTCTTGCTCTGGCTGTACACTTTGCTGTGGGAGCCGTACCCAGTCATGTCCCAGTTGGAACTTGGCTCTACTTTTAGTTTCTTCACACTACAGAAGGCACTTGATTGAAGGGTGTGAGGGGAGAAAACTTGCACATGTGAGGCCATACCTATAAGGAAAGAAAAAGGAAAATTAATTCTT----TCACTCCTCCAATAATAAACGTAATCGACTCATTTAGGCTCAGATTGTTCTTCCACTCTGAAAGAAGCTTAAg s rn2.chr4 63547772 1318 + 183307734 ATATCAAGGTCTCTGTCTGGTAACAACCACAATCA-------TTATCCCCACCATGGTGATTCTCTCTGCACATTCCCCGTGGATGCCACTGGACCTCCTGCATCCTGACTATCTCCATGGAAAAAGTCTTACCTGTAGTATCTGGATTGCAAGTACGTAGAACAGACAGCTTTGGACACATGACTAGCTGAACCAAAGTCAATGACCTTCACTCGGTATGGTTGTCTGGATGGATCCACCAGCATGATGTTTTCTGGTTTGAGGTCAGCATGGATAAGACCCAGGCTTTTGAGTTTCATCAGGGCTGTGGCTACCTGCTGGAGGACTGGGCGAATATACTTGAGGGGCAAGGGACTAAACTTGTTCTGTTTCAGAAAGTCATAGAGGTTCTGCTCCAACATCTCAAAGACTAAGCATGTGTGATTCTTGTGCTGGAAGCACTCATAGGCCCGCACAAAATTGTAGTCATCAGCGCTCTCCGTGCTCAGCCGGGCCAGGATGCTCACTTCAATCTGGCCTTGCCGGGCATAGGATGGGTGGTTCTTTAGGATCTTAATGGCCACAATTTCATTGGTGCCCCGTTTCCAGCACTTGACCACTTGCCCAAATGTCCCTCGCCCCAAGAACTCTAAAACCTCATAGGTGTTTGTCATAGAGCACAGCACTTCATGCTGCACCAGCTGATAGTCACCTTCACTGTTGGAGCCACTGTTTTTGGAGGTGGCAGTGGATGTGGTGGCAGTGGCGACAGTGGCCCCGCTGGCATTATTCTGAATCATGGGTGGATGCTCCTCAATGATCTGCACGCTGCTTGTGTTCTCAATCTCCTCACTCTTGCGCTTGAGTCCACATTTTTGGTAGGTGTCAAGGAGGCTCACAGTGCTTCGACGCATTAGGTTATGTGGTCCACCGAGGACTTGCCCGGTGACAGAAGTGCTACTTGCTGATGTTACAACTATGTGTCCAGTACTTCCTGGGAAGATGATGGTCTGCTCGTAAGGTAGGCTTGGGTTTGGGATTGGCAAGGAGGTGCTGACGGTTGTGGAGGCTGGCTGAGAAGGTGGTATGTTCTTGCTCTGGCTGTACACTTTGCTGTGGGAGCCGTACCCAGTCATGTCCCAGTTGGAACTTGGCTCTACTTTTAGTTTCTTCACACTACAGAAGGCACTTGATTGAAGGGTGTGAGGGGAGAAAACTTGCACATGTGAGGCCATACCTATAAGGAAAGAAAAGGAAAAATAAATTCTT-GAGTTACTCCTCCAATAATAAACTCAATTAATTCACTAAGACTCAGATTGTTCTTCCACTTTGAAAGAAGCTTGAG a score=44685.000000 s hg15.chr7_random 675021 622 + 1057565 CCATACAGAATATATTCCTCCCA-------------------------------------CTTGAAAAC----AAGGTTGAAAAAGTGAATCTC-TTCCACCCAGAAGCACATTCTGGTCACTGAGTTTGTGGAACCAAGTGGTTCCAGGGTGCCAC--------TTGCCACCATT---AGG---------TGCCAGCAACACAGCTGAGACT----CAGAAACAGAATTCCAATATCAGGACATAGGTCATCATTT-TTTTTTGTAAACATTACTTGTGACAGAAATGGATTCTTCCTCAGTTCTCCCTGGGTTGCTTTCTACTGAAACTCAGGAGGCTCTGC-----------------TGTCACGTACTTCGTTGC-CCACATCATCAGCTCAGCCTTGTCCACAGACCCT----GTCAAGTTTACTGGTTTGAGAAAACATCTTCCCACACAGGCCCCATCACC-AGGCCACTCAGGATCTTCTGGATCCTGGATGAACC---CTAATTACCAGCTGGCATCTTTGTCATC---GATTCTGTAGGGTTTAGTGGATCAGCAGTTGGTCTGACGTTT--TTCATTTCAA---------CAGCATAAAACATTTTATCAGCCTTACTGGTGGGGACTGGGTAGCACAATTCAT-GGCTCCATTCACTCACGCTTCCTGCTAAATTCATATATCAATACATTTCTCTAGAAAGTACTATTTCTTTTTGT s mm3.chr6 38805312 659 + 149950539 -ACAACAT--TACATTTCTTGGTCTGCATGTGCACATGAACATATATACATGCATGATGATTTAAAAATTCAGCAGCTTGAAAAAGCAAATCAGTTTCCACCCAGAAACACATTCAAGTCTCCTTGTTTGTGAGACCTA-TGGCTCCCATATTCTGCCATCAGATCTACCAGCGTT---AGGATAGAAGACTCCTAAAAACAGAGTCAAAAATAGTCAAGAATCAGA--TAAAGAATCAGGACTTAGTTCATCATTTATTTTTTGTAATTA--ATTTGTAACAGAAACCAATTCTCC----ATTCCTTTCAGGTTGCATCTTGCT--AAATCTGAAGATTATATCAAGTATCCCAGGTAAGTGTTACATACTTAGCACCTCCATGTAGTCAGCTTAGCCTTGTCAACAGATAGCAATAACTAGGTTCACTACTCTTAAGAAACACGTCCTTGCACAAACCCTAGCACAGGGGTCTCTCGTGCTCGTCTATGCTCTGAGTGGGGCAGACTACATACCATCTGGTACCCTCATCATTCTGAACTCTATAAGGCTGAGTTGAT----GGATGATTTGGTGT-----------------------CCCCTTCAGACA---------------------GGACCCAGTAGCACCGTGTGTGGGCTCC--TTGCTCA-TTGTTTTGTT-AATCTAGACAGTAAGAAATTTCTCTCAAGAATCCTGAG--ATTTTAg s rn2.chr4 63549346 624 + 183307734 -cctcca---cacaTTTCTTGCT-----------------CATTTATACATGCATAATGATTTAAAAATTCAGCAGCTTGAAAAAGCAAATCAA-TTCCACCAAGAAGCACATTCAAGTCTCCTTGTTTGTGAGACCTA-TGGTTCCCTTGTTCTGCCATTAGATCTACCAGCTTTAGGAGGATAGAAGACTCCC-AAAACAGAGTCAAGAATAGTCACAGATCAT-------------------------TCACTTATTTCTTGT------------------AAACCAATTCTCC----ACTCCTATCAGGTTGTATCATGCT--AACTCTGAAGACTATATCAAGTA-ACCAGGTAAGTGTTGCATACTTAGCACCTCCATGTAGTCAGCTTAG-CTTGTGAACAGATGCTAATAACCAGGTTCACTGCTCTTAAGAAATATGTCCTTGCACAAACCTCATCACAGGGGCCTGTCAAGATCTTCTGTGTTCTGAATGAGACATACTACATACCATCTGGTATCCTGGTTATCTTGAATTCTATAAGGCTGAATTGAT----GGATGATTTGGTGTTTGGTTGGCTTAAAACATGTGTCCCCTTTAAGATA---------------------GGGCCCAGTAGCAACATTTGTGGGCTCC--TTGCCCACTTGTTTTGTC-AATCCAGACAGTAATAAATTTCTCTCAA-AATCCTGAG--ATTTCAg a score=8595.000000 s hg15.chr7_random 675956 89 + 1057565 AGAAG-------------TACTATTATTTCATACCAACATCTCATCCACAATTTAGATAAACTTAGAAACCTATGAGACCGTTATTCTGGAACACTTGTACA s mm3.chr6 38806269 88 + 149950539 GGAAGCTGAGAGTGAACGAACTATGATTTCATAT-----------TTGCAACTCAGATAATCTTAAAACTGCTTAAGACCT---TTCTGAAGTAGCTGTACA s rn2.chr4 63550266 87 + 183307734 GGAAGCTAAGAGAAAAT-AGCTATGATTTCATAC-----------TTGCAACTCAGATAATCTTAGAACTATTTAAGACTT---TTCTGGAGTAGATATATA a score=2014.000000 s hg15.chr7_random 676045 111 + 1057565 ------AATTACGGTGATACTGAAA----CAAAAATTCATAGAAAATATATTAA-GCAAAAATAATAAGGTGAT---GAAGGATAACTCCTTAAAGGTTAAAAGAGTAACAAACA------TTGC------------CCATCT-- s mm3.chr6 38806357 142 + 149950539 ACTTATAATTATGGTGATACTGGAAATTTTAAAATGTGATAT---ATAGATTAAGGAAAAAACACTACAGCGACAAGAAAGGAAAACCCCTTAAAGGTACAAGAAGAAACAAATAACCAATTTGCTGCCTTGGATAACCATTTCT a score=2646.000000 s hg15.chr7_random 676156 20 + 1057565 --------------------------------TCTAAGCCACTATCAACAAA s mm3.chr6 38806499 52 + 149950539 TGTGTGTGTGTGTGTTTTCATGTGTATACATGTCTGAGTATGCATGTACTAA s rn2.chr4 63550416 52 + 183307734 tgtgtgtgtgtgtgtTTTCATATACATACATGTCTGAGTATGCATGCACTAG a score=88268.000000 s hg15.chr7_random 676176 859 + 1057565 CATTTCTCACAGAAGCAC-AAGGAAGTGCAGCTTCTG-CAAGCCCTGTTGGGGGTTGGCTAACCTAGTGTTCCTGTCTCTCTGAGCCCCTGGCATTACCTAGAGTGGT-----AATCCTTTCC-----ACTCCATCAACCATCACCCTAGTCCACCTTCTCTCTCAGTAGATGACCCAACTTCCACTTTGTCCAGAAGCCTGAGGTCAGCCTTACTTTCCTCCTTTATTTCCTTCTTCATTTCAGAACATTCCTGAATCTACATCATCCTCCATCCTTCATTCCTTCTCTCCAGTCTGAGAGAAAGAGGTGTTGCTCTTTTCCAATACTAAAAAAGTTCCCGATTCTCATGATCCATATTTGTCCCATTTTCTCTTGAACCTGCTTCCACCACTGTTCTTTCTCTTGTAGCTTTCCATTTCTCCCTGTACTTAATTGGATCCAAGTATTTAGTAGGAACTTAATATGGCTGTCCAAATGAATCGGTCACCTCATCTTTTTCTTCTGCCTTCA--TGTGCGTGCACACACAAACTCCCAACATGGAAGGCAAAAGGAGTAACAGCCGCATTCCCCCCTCTTAATTCTTTCCCTCCTCTCACCTGTGATCA-ATGGTTTATGCTCCCTTTTCTTCAATGCCCACATCTTAATCCATCTCCCCCAACTCGTTAATGCACTATAGGCTCctgttcttgaaggtaaatgacttcctaattgcctaatccaatggccttgtttcagccc--gttcttcttaac--ctctgcaacatctgatactgctgaccacgacttcc-------------ttcttgatgctcttctctggacttcagtgaatctgtaa-----tctccccatcccgtgtctgattgcacactgtgtgctcgggtggttc s mm3.chr6 38806804 735 + 149950539 CATTTCTTACAATGGCACTTAGAAGGTGAAGAGACCGCCAAGCTTTACTGATACTTAAGCATCTAGCAGCT----GCTCTCTGA-CCCCCAGCATTGTCTAGAGTGGTTCCTTAACACCTCCCTCTTAATGCCATCCTTTGTC-CCCCAATCCTCCCTCTCT-TCAATGGAT--CCCCAC--CTATCTTGCCCAGAATTCTGAGGTCAGTC-----------------------------------ACATTCTGCTAGTCCCATAATCCATAGTCTCCCATTTTTTCTAT----------AGAA---------------------------------TTCTGTTTCT-----GCCAT-----TCCCATCCCCACTTTAAGCTATTGA-------------------------------TGATTTCTACTTTTGG---GGCCAAAGTTTTTAGCTGGTATTGAACAAGGTTGTTCAAATGCATCACTGACCTAACCTTTCCCTC-TGCCTCCAAGTGTGTGTGCAGGCACAAACCTCCAACTTACAAGACAGAAAGAGTAACAGTCACAGCCCC---TCTTCACGCCTTC---CTTCTTACCTATAAATT-ACGCTTCATGTACTCTTTTCTTCAATGCTCAT-TCTTAATCCTTCTCCTTCAACATATTCAAATATCATAGACCTGtgttctt-aaggtaaataacttcctaattgcctaatccaatggc--tctttcagcccctattctccttaacctctctgcaacatctgataccgctgaccaccacttcc-------------ttcttgaCGTTCTTATCTGCTCTAATGTGAATCTGTAACTGCCTTCCTCCTCCCAATGGCTAATTACACA---GGGGTTAAGGCAGCTC s rn2.chr4 63550721 749 + 183307734 CATTTCTTACAATAGCACTTAGAAGGTGAAGAGACTGCCAAACTTTACTGATGCTTAAGCATCTAGAAGCT----GCTCTCTGA-CTCCTAGCATTGTCTAGAGTGGT-ACTTAACACCTCTCTCGTAACACTGTCATTTGTC-CCCCAATCCTCCCTCTCT-TCAGTGGAC--CCCCAC--CTATCTTGCCCAGAAACCTGAGGTCAGTCTC---------------------------------CCATTCTGCTAGTTTCCTAATCCATAGTCTCCCATTATT-CTCT----------AGAA---------------------------------TCCTGTTTCT-----GCCAC-----ACCC---TCCCCTTTAAGCTATTTA-------------------------------TTATCTCTGTTAATAG-TGGGCCAAAGTCTTTAGCTGGTACTGGACAAGGTTGTCCAAAGGCATCACAGACCTAACCTCTCCCTCCTGCCTTCAAGTGTGTGTGCATGCACAAGCTTCCAACTTACAAGACAGGAAGAGTAACAGTCATAGCCCC--CTCCTCACTCCTTC---CTTCTTACCTGTAAATTGATGCTTCATGGACTCTTTTCTTCAATGCTCAC-TCTTAATCCTTCTTCTCCAACATATT-AAATATCACAGACCTGTGttctc-aaggtaaatagcttcctaattgcctaatccaatggc--tctttcagcccttattctccttaacctctctgcaacatctgatactgctgaccatcacttcccatcatcacttccttcCTGATGTTCTTATCTGCTCTAATGTGAATCTGTAACTGCCTTCCTCCTCCCAGTGGCTTATTACACA---GGGGTGAAGGCAACTC a score=100469.000000 s hg15.chr7_random 677316 812 + 1057565 ctcttc---ctcctttcaaatgttggcatttccaccgttttgactctgttctctctggcagctatcatccattcaagcagtttaagccgtcacctctgtgtaggtgacccccacatgtttatcacaggctgggctctccctcagaggttacagtgata-tattgcagcctcctgctacaatgtcaaagatgcgcttccaaagctgaaccccttattttttcctaaaaatctagccatctcaccctctatcctaacatctccat-------------gactgttctagtcacttggctccaaaa-ctatgaact----atgatggttcttctttacattcatagacaagaaggtgctaagcctt-attaatttctccttccttcaaaacatc-----------------------------------------------tcttgcatccaattcttt-atttctgctgttgctgccacttccacagtgaatgtatttatcactttctagaagga---ctaaagcaaatctagacatctcatctacctgagcactctgtctccctttaatttgcctatatttggctaccagattaatcttcctaaa-acatctctgagcatgccactcccctctccaaa--cttccactggctccttactgtcaaggagataaagctgagaactcgatacatttacatgttgattccaact-accttgttagctccagct----ctactaaccttcctgggtccttaacttgaatgaagctggtctattcgctgtttctaga-----atgtctcttatacttcctaccttcacactcttacactatt--cctttacctggcatgcctttGCTGCTTTTCTCAACTTATCCAAAGACCAGCCAGCTTAGATTCC s mm3.chr6 38807539 852 + 149950539 CTCTTC---CTCCTTTAAAATGCTGGCACTCCTAGT------ATTCTGTTTCCTCTGGAAGGCATCATTCATTTAGACAGTTTAAACAGTTATCTCTATGCAGGCAACTCCCACATGCTTATCATGAGCCAAGTTCCCACTTGAATATTCCAGTAATATTATTTCTGTCTCCTACTACA---TTAAAA-TGATCTTCCAAAGCTGAACTCCTTGTCTTTCCCCTAAAACATAGCCATTTA-TGCTTCATTTTAACATTTCCATTCTATTAATAAAGTATTTATCTAGTTGCTTGGTTCCCAAA-CTGTGGACTTACCTTGATGAGTCTTCATTATCACAGCAAATAA-AAGACA----GTCTTGATTGATTTCGCCTTCTTTTAAAATGTCCTTTTTTAAA--TTAAAAGTATTTAAATAGCTATATAAGGCAACATGTCTCATTTTCAACTTTTTAATTTCTGTTCATTTTGCCACTCCCATAGCTGAAATCCTCATTACTTTTCAAAAGCAACCCTAAAGTAAATATAGGA---------TCCTGGTCACTGGAATGAGCGCTAATGTGCCTGTATCTGGCCCGCAGATTTGTCTTACTACATAAACTTCTAAGCATTGT--TCCTCTGTCCAAAAGCTTCTGGTGGCTCCTTGGTGCCCAGGAGATAAAGCTGAAGTGTTAACAC----ACATCCTGATTCCCATTCAACCATTTAGCTTCATCTTCGACCACTGATCCTCCAGAAATCTCAACT----CTAGACCGGCCTCACCCCTTTTTCTAGAATAGCATACCTCCTGCACTTGCTTCATTCACTCCCCAGTACTTTTTACCTT---CTGCCATGAAGTCATTGCTTCTCTCAA-----CTAAAGACCACGCAGTTTAGAGGCC s rn2.chr4 63551470 862 + 183307734 CTCTTCTTCCTCCCCTAAAATGCTAGTGCTCCCAGT------ACTCTGTTTCCTCTGGAAGGCACCACTCATTCATTCAGTTTAGGCAGTCATCTCTACGCAGGCAACCCCCATCTGCTTATCATGGGCCAAATTCCCACTTGAATGTTCCAGTAATATTATTTCTGTCTCCTGCTACA---TCAAAAATGATCTTCAAAAGCTGAACTCCTTGTCATTCA--GAAAACACAGCCATCTAATGCTCTATTCTAGCATTTCCACTCTGTTGATAAAATATTTATCTAGTTGCTTGGTTTCCAAAACTATGGACTTACCTTGATACGTCTTCATTACCTCAACAGACAA-AAGATACTTAGTCTTGGTTGATTTCTCCTTCCTTTAAAATGCCttttttaaaaaattaaaagtatttaaataaCCATATAAGGTAAAATGTCTCATTTCCAACTCTTTAATTT--GTTCTTTATGAAACTCCCATAGCTGAGATCCTTATTACTTTTCAAAAGTAACCCTAAAGTAAATATAGGA---------ACCTGGTCACTGGAATGATCATTAACGTGCCTGTATCTAGCCAGCAAATTTGTCTTACTACATAAACCTCCAAGCCTTGT----CTCTGTTCAAAAGCTTCTGATGACTCCTTAGTGCCCAGAAGATAAAGTTGAAGAGTCAACAT----ACATCTTGATTCCCATTCAACCATTTAGCTTCATCTTCAACCACTGATTTTCCAGAAGTCTCAACT----CTAGACTGGTTCCACCCCTGTTCCTAGAATAGAATGTCTGCTGCACTTGCTTCATCCACTCCCCAGTACTTCTTGCCTT---CTGCCATGAAGT-ACTGCTTCTTTCAACTAATCTAAAGGCCATGCAGTTTAGAGTCC a score=21.000000 s hg15.chr7_random 678142 117 + 1057565 CACTCTAACCCAGTGATCATTCCCAACTCA----CTGTTC--CTACAGCACTTACCA------TATGTACCATCTG----------ACTTCAGCTCTGACTTCCTAGGGGCAGTTCTGCTAACATCCAGCACCTGATTG s mm3.chr6 38808770 122 + 149950539 TACTCTAGAATGAAAAACAATACCAAGGCAGAGGCTGTTCGGCTCCTGCGCTGGCTGGACAGTCATGCTCTGCCTGTGCTATGGCAGCATGTGCTCTGACGTCCTGGAGGCAGGT-----------------CTGGTCT a score=99900.000000 s hg15.chr7_random 678259 888 + 1057565 GAGCCCCACCTCCACCCTGGGCCCATGGATCTGCTGGAG----------------GGTGTTCCCTTCTTGCTTCAATCCTGAGCTCCGACCTCCACCTACGCACTGTGAC-----------TGCACGTCTGTAGGAATCCTCGTGCCTGACAAGACTATTCTGGCTTGCTTATTCAGAATCCGTACTTCACCCGTTTCTTCC---CACTGTTC----------------TTTTTGTTC-------AAGTCAACATCCCCCTTA-TTCTAAGTCAACATCCCCCTTATTCTAGAACAACACAGAATATGGCTATTCCCTATTTATCAGTATCAAGTGAATATCCATATTGTT-CTAGATGTTGTATAC------------------------------------------------------------------------------------------------------------------------AATATAGAAATGACCAATTACTTGGCTTTCAGTAACTTAGCCACTGAAGAGTCAAAGCAAAAC----AGCCATTTCCTTCATCCTTTCGTGTCAAGCCTGCTGCTTATTTTTCAGTCTTTAAGTACCCGGAAG--GGGGCGGTCAGAGAGAGCGACAGCAGAAATACGCTGTTCATACATAAAGAAGGTGAGGTGCTAGTCTCTGTTTTCACTGTTTCAAAAAGATCTTGGTGGAAAGGCCGTCCACGGTGCAGAAGTGGAATTTTACAGAGGGGAAGAGGGTGGCTTATGACTTATTTGTTATTGGGATGACAGCCAAGGGTCATAAAATTGTGGAAATCATCACTGGCTGCCTCTGATGACAGATGCCCAGGATCAGACAGGAGGCCTACATGGCTGGAAACACCCTGCACCA-------CAGCCGGC---TGCCTCAGACTCCGGCCTGGCCTGGTGTGGCCCCTGCTGCCCCTTTATGAAGTCAACAGCCGCTATTCCAATGACTGGACCCAACGCTCAGTGCAGACGTGTTACCTTTGTTCTGTAGCAGAGGCCACTTTGC------TTCAGGCAGCAAAATGCTCCAACAAG s mm3.chr6 38808892 1033 + 149950539 TAGCCTAAACTCTCCTCTGAATC--TGCCTTTACGGTGA-----------------GACTTCCCTTCTGGTTTGAAAGCTGA-CTCCAAGGTTCACCTGGGTACTATGACTAATATGCCTGtgtatgtctgtatg--tctgtatgtctg-tatgtctgtGTATGTTCACCTGGGCACTATGACTAATATGCCTGTGTATGTCTGACATGATTACTGTTTGACATGGTTATTTTGGTTTGTTATGCAACCATACTTTTCACCTACTTTTATGTCAATATTTTCCTAATACC---ATAGCACAAAAAGTAGTTATTCTCTACTTACTAATATCACTTAAATATTCATATAGTT-ACACATGCTATAAGCCAGACAAGTTCAACCTGTGGCCTGCTGGCTTCATGTGTTCCAGTACACTAATGAATTTGCTCCAACACATTTGCAAATGGCATTTTGTTACAATGTCAAAAGGTCTGATACCCTTGAAGTAATACAGAAGAGAGCAATC-CTTGGCTTTAAGCTACCTATGAACAGAAGAGACTAAGCAAAATTAACATCTATCTACTTCAGCT--CTGTCCTTTGACTGTCTCCTGCTTCTCA--CTCAAGTTACTAAGGAA--AGGGAGAGTAGGAGGGGAAA-AGAAGAAATAAGCTGATTACACACAGAGCTTCAGAGGCACTGGTCCCTGTCCTCAGTGTTTT-AGAAGTTCTTGGTAGAGAGG----CCACATTGCAG-AGTGGAATTTTACAAAGGGGAAGAGGGTAGCTTATGACTTATTTGTTATTGGGATGATAGCCAAGGGTCAT-AAACTGTTGAAATAATCACTGGCTGCCTTGGGTGACAGATGCCCAGGATCAGCAAGGAGACCTGCATGGCTGGAACCTCTCTATACCCATCATTGTGGCCAGCAGCTGCCTCAGACTCTGGCTGGGGCTGCTGTGGTCACTGC----------TGAGGTCAACAGCCACTATTCCAAGAACTAGAACTAACATTTCCAACAACCTTTTTACCTTTGTTCTATGGCATGGTCCATCTTCCTGTGGATGTGGGAAGGAGAATGCTCAAACAAA s rn2.chr4 63552887 924 + 183307734 TATCCTAAGCACTACTCTGAATC--TGCCTTTACTGTGACCCCATAGGTCAAAAAAGACTTCCCTTCTGGTTTAAAAACTGA-TTCCAACCTTGACCTGGGTACT-------------------------------------------------------------------------ATGACTAACATGCCTATGTATGTCTGACATGATTA----------------TTTTGGTTTGTTAT--AACCATACTTTTCACATACTTTTATGTCAGTATCTTACTAATATC---ATGGCACAGAAA-----TATTCTCTATTTATTAATATCACTTAAATATTCATATAGTTTATACATGCTATAAGCCAGACAAGTCCAACCTGTAGCCGGCCAGCCTCATGT-TTCTAGTACACTAACGAATGGG-TCCAACATATTTGCAAATGGCACTTTGT---------------------ACCCTGGAAGAAATACAGAAAAGAGCAGTC-CTCAGCTTTAAGCTACCTATCCCCAGAAGAGACGAAGCAAAAC------CCATCTGCTTCAGCT-TCTGTCCCTTGACTATCTCTTGCTCCTCA--CTCAAGTTACTAAAGGAGAAGGGAGAGTAGGAGGAGAAA--GAAGAAATAAGCTGATCCCGCACAAAGCTTCGGAGGCATTGGTCCCTGTCCTCACTGTTTC-AGAAGTTCTTGGTAGAAAGG----CCACATTGCAC-AGTGGAATTTTACAAAGGGGAAGAGGGTAGCTTATGACTTAATTGTTATTGGGATGACAGCCAGGGGTCACAAAACTGTGGAAATAATCACTGGTTGCCTTGGGTGACAGATGCCCAGGATCAGCAAAAAGACCTGCATGGCTGGAACCTCTCTATACCCATCAT--TGGCCAGCAAATGCCTCAGATTCTGGCTGGGGCTGCTGTGGTCACTGC----------TGAGGTCCACAGCCACTATTCCAAGAACTAGACCTAATGTTTCCAACAACCTTTTTACCTTTGTTCTATGGCACAGTCCATTTTCC------CTTGGGAAGAAAAACGTTCAAACAAA a score=149585.000000 s hg15.chr7_random 679147 1430 + 1057565 ATATAGTT----AAAGTCTTTAACAGTAATACTTTTTTAAATCCCTGAAATACCTTCATAAGGAATAAGACACTGCTGGTGGTTTTGTAGCTTAATCTTAAAATAATCTTATGGCAA----CACACTTATTTCCAAACATTTCTCCTTGAGAGTATTTCTCTGGAACAAACCTTCCCTATTAGTTTAGCTTTCAGAGAGTTGAGCCCACAACGTATTACTTCTCTATTTATTCAGAT-CCTAAAGTGAGGGACAATAAAGTGGGGGTGCAGAGGGGGACTCAATGTTTTTTTCCACTTGAAAGTAAAAGCTAAATGTCTCCTCTCATTTCTTTCTGTATTGACCTCTGGACTAGTCAAGG-CTACTTCCCGCCT-------CATT-TGTCAATA--------TCCTTTTCAG-GAAAAACAGAGG-CTTAATGCACATTGTCAGTTTGATCCAATGGCAAAATCTCAAGTGCTTTTTAAGTTATCTCTGCACTTCCTAGTTGGCTCTTGAAAGAGAAGGCGGATTTTACTC-CTTCTAGGTGACAGACCAGGGGGACTACTGGACTTGGGAGGGCAAGTTTCGAGCCCATGGGGAGCAGTAAGAGGAACCCAGGAGGTCACGGTAGGATAAATCTGCCATAACCACACCTGCTCC-TACAGGAATGACCTGACCCAGACTTTTCCACAAAAGCCTTAGTGGCCTCCCAAGATAAAACCTGTCAAAATGGCCACATTTTCATTCA---CTAAAGGACAGGGAGTCACCATAACCTAGAACTAAAGCTTTTAACAAGTAGCATGCCTATTACCATACCACTCTGTCTCATAAACAGGCTGAAGTCATAAACACTGAATCTCAGATATGCATGGGGTTCTTACATGCTTGTTAATTACACAGACACGAGTTCATGTGGTTGCTACAGAAGTGATAAGTAAAAAGCACTGAAGAACAAATTTATTAAAATTTAAAACAACTTCTATTACACAACTATATATAATAAACTCTTCATTGCATATGACAAATGAAAAATAGCACCTATAAAACTGACATTAAAATATATGCTATAGTTAGA-AGAATTAAAGTCCACTATTTGTAAGACATTATTCCTTATTACCATAAAGCTGACAAAG-TCTCTCATGC-CGAAACAAATCCAGGTTACCCAGACTTAGGGTGCACTTTGAT-------ATGCTAAAGGCAATGAGGGTTCTGACCCTTCTTTTAGTTACTTTATTGAAATTCTCATTTTGCATTTATAAAAAGCATGTAT-GCAAGTCTGCATTTCAAAATACTAT----------TTTTAAAACATCTGCCTTCTAGCCTTAATTATAGATGCCATTTATGTCTATAAAATGCTAG---ACTTGACTTCATCTGCTATTCCTCAGGATTCTTAAAACACTTATGAGTCTCCAGGTTTTAAAATCTTGAGTACTA--AGTACACAGCAGGCTCCAGGACAGATGTTTTATGGA---------------------------- s mm3.chr6 38809925 1288 + 149950539 ATATAGCTAAAGAAAGTCACTAAGGATGA---TTTTTTTAAGCCCTAAAAT--CTTTATAAGGAACAAAACA---CTGGCAGTTT-GTAGCTTCATTTTAAAATAATCTCACATCCATAATCAAACTTATGTCTAAACATCTCTCCTTGGAAGTCTTT-TCTGGAACAACCCTTCCTGGTTAGTTTAGCTCTCTTTG--TTAAGCCCACAACCC-CTGCCATTCCATTTGTTCAGATCCCTAAGGCAAGGGACAGGGAAGAGGTG-----GGGGAGACCTGTATG---TTTTCCACTCTAAAGGAAAAGCTAAATGTTTCCTCTCATTTCTTTATGGTTTGACCCCTGTACTCTTCAAGGACTACTGACCTCCTATACACACAAA-TAATAATAGTAATAACTTCCCCTCAG-AAATGGCAGGCG-CTGACTGGACATCTTCAGTTTGATCCTAT-ATAAAATTTCA---------------ATCTCCGTGTCTCCTCTTGGGCTCTTAGAAGAAAACGTGGCTCTGACCC-CTACTAG---------CA--------------------AGGATAGGTTT-AACTCCCTGAAGGGCAGTATGGAGGACCCAGGGAATAAC---ACAATAAATCTGCAATAATTACACCTGCTCCTTAGAGGTATAGCCC-ATCCAGACCTTTCTATAAAAGCCTCGGTGGCCTCTCAAGATAAAACCCTACATAATGGCTGTATATCCAGTGATTGCTGATACATAGGG-------------------TGAAGTGTCTACAAAGGAGTATTCTCACTACCATGC--CTCTGGCTCTTAAGCAGGCCAAAGGCATGAGCATTGAA---CACATCT-----------TTCCATATTTCT---------------GGGCTTATGG---------ACAAACTACCAATAAAAGAGATATACTTACAAACTCACTAGAAATGTAGCTAACTTACAT--CTCAACTGTATGCAATAAATTCCTCACTTC--ATGACAAATAAAAAGTAGTGCCTATAAACCTG--ATTAAAA--------ACAGTCACACAGAATGACAGTGAACATTTT-----AAGTCATTCCTTATCACTACAACAAAGACAAAACTGTCTTATGTACCAAACAAACCCAGGTCCCAAAGGTTTCAAGTGCCTTTTGGTAACCTGCATGTTTAA-ACAATGAAGAT--GAACTGCTCTTTAGGTTCCCCGC---AAATGCCCACTTCACAT---TAAAACGTATCTACAATAAACCCGGG------------------------TTTCAAAGCATCTGCCTTGTAGTCTT-TTCATGGGTGCCATGGATGCCCACAAACTTCCATCACACTCGACTCCAGCCTCTG-----------TATAAAATCATGGACCATTCTTCAGATTGTAAATTAGCAAGCACCA---GTGCACATGTGGCTCTGGGAGAAGTGTCTTTGGGA---------------------------- s rn2.chr4 63553926 1331 + 183307734 ATATAGCTAAAGAAAGTCATTAATAAT--------TTTTAAGCCCTAAAAT--CTTTATAAGAAATAAAATA---CTGGTAGTTTTGTAGCTTCATTTTAAAATAGTCTCACATTCATAATCAAACTTATGCATAAACATTACTCTTTGGAAGTAATT-TCTGGAAAAACC-TTCCTGATTAGTTTAGCTCCCTCTGAGTTAAGTCCACAACCT-TTGCCACTCCATACGTTCAGATCCCTAAGGCAAGGGGCAGGGAAGGGGAC-----GGGGAGACCTGCATG---TTTTCCACTCTAA-GGAAAAGCTAAATGTTTCCTCTCATTTCTTTATGGTCTGACCCCTGTACTCTTCAAGGTCTACTGACCTCCTGTACACACAAAATAACAATAGTAACAACTTCCCCCCAGGAAATGGCAGGGGGCTGACTGAACATCTTTAGTTTGATCCTAT-ACAAAATTTCA---------------ATCTCTGTGTCTTCTCTTGGGCTCTTAGAAGAAAACTTGGCTTTGACCCTCTTTTAG---------CA-------------------GAGGATAGGTTTTAACTCCCTGGAGGGCAGTATGGAGGACCCAGGGAATAAC---ACAATAAATCTACAATAATTACACCTGCTCCTTAGAAGCATAGCTC-ATCCAGACCTTTCTATAAAAGCCTTGGTGGCCTCTCAAGATAAAGCCCTACATAATGGTTGTGTATCCATTGATTGCTGAGGTACAGGG-------------------TGAAGTATCTACAAAGGAGTATTCTTACTACCATGC--CACTGGCTTGTGAGCAAGCCAAAGGCATGAGCACTGAA---CACATCT-----------TTCCATGTTTCT---------------GGGCTTATGG---------ACAAATGACCAATAAAAGAGATTTACTTACAAATTCACTAGAAATTTAGCTAACTTACAT--CTCAGCTGTATGTAATAGATTCCTCACCTC--ATGACAAATAAAACATAGTGCCTATAAACCTG--ATTAAAA--------ACAGTCACACAGAATCACAGTGAACAATTT-----AAGTCATTCCTTATCACTACAAAAAAGACAGAA-TGTCTCATGTACCAAAAAA----AGGTCCCAAAGGTTTTAAGTGCCTTTTGATAACTTGCATGTTTAA-ACAATGAAGAT--TAACTGCTCATTAGGCCCCCCCA---AAATGGTCATTTCACAT---GAAAACTTATGTAC----AGCCTGTGTTTCAAAA----ATAAAATAACTATTTCAAAGCATTTGCTTTATAGTCTT-CATATGGATGCCATGTACACCCACAAAATTCCATCACACTTGATTCCAGCCCCTA-----------TAGAAAATCATGGGCCATTC-TCAGATTGTAAATTACCAAGCACCCTGTATACACATGTGTCTCTGGGAGGGGTGTCCTTGGGAGAGTGAGTGAGCACCTTTGCCTGAGATA a score=25342.000000 s hg15.chr7_random 680590 370 + 1057565 GACCACCTCAAGAGACAAGTAAACCAGACCTGCAGCAGATACTGAGGAGGCCAGGTGTGTGCCTGGCAACGGAAGGTAAGCCTCAGATGGACTTTTCCTATCCTTTAGAAATGTTTGGTAAAGTCTAAATCAAGACTAAAAATCTGGTAGGCTTTTTCTCTTCTGAGCAAGAGTGAATTTGTTAGCCTTAAATGTCTGGTACTATGTTGGTAAAGTAAAATGATGCGTTTTACTAGCCAAACACCCATTTCCGGCCCAGTCC-------------ACAGCTGAGGTGCCTTTTTG----------------------------------AGCTACCT---CAGG-------------------------------TTCTACTTCAGAAATGTTTGTGGCACACAGAATCAGAACTGGAAATCTACTCTATTCTTTCCCATTTTGGTGTTCT s mm3.chr6 38817590 266 + 149950539 GACCACCTC--------AGCCACCCAGACTTACAACAGTCACTGAGGAGGCCGAGTAGTTGGCTGGTAA-GGTCAGTCAGCCTCACATGAA-TTATGCTATCCCTTAGAAATGCCTTATAAATTATAAAGTGAGACTCATAAGCTGGTGTG-------------------AAGAAAATTGGATATTCCCAAATGTTTG---------------------------------------------CTTATTCCATGCTCAGTTC-------------ACTACTAAATTGGTTTTTTT---------------------------------------------CAAG---------------------------------CTTAGCCAGAAA-ATCTGATACACTTAGAAGCAGAGCT-------------------TCCCATGTTGGTGTCTT s rn2.chr4 63561962 376 + 183307734 GACCACCTC--------AGCAAACCAGACTTACAGTAGTCACTGAGGAGGCCGAGTAGTTGGCTGGTAA-AGTCAGTCAGCCTCACATGAA-TTATGCTATCCCTTAGAAATGTCTTATAAATAATAAACTGAGACTCATAAGCTGGTGTG-------------------AAGAAAACTGGATATTCCCAAATGTTTG---------------------------------------------CTTATTCCTTGCTCAGTTCCCCCCAAAGCTTAGCCAGGAAAtctttttttttttttccggagctggggaccaaacccagggccttgcgcttgctaggcaagtgctctaccactgagctaaatccccaaccccCTCTTAGCCAGGAA-ATCTGATACACTCAGAAACAGAGCTGGAAACGTGGTCTACACATTCCCATATTGGTGTCTT a score=144484.000000 s hg15.chr7_random 681458 1257 + 1057565 CCTTGGCTGACTGGACTCTGAACAGT-GAAGGGATAGCCTAGAAGGA-------AGGAGCTGAGCCACCTGACTGAGTGGTGAGGTTGGTGGATGTGCAGATGGAATTCCT-GGCATTGAATTGGAGGGCAGGAG----TTTTAGTTTGAGTAGAGGTTAGGAAGATAAAAGA-GGTGCGAGAAACCTGTTGTCAACCTCCAGCAGATTTGGTAGCTTGTGCCACATGTGCAGCATCATGCTTGGGGACTCA-------------GGGGACATCAATAAGTAGTCAGTAGCTGATGCTTAtattggtagtgcctacagtgtgccaag-------------cccagttctgagcttaatactttacatacatta-gccactt-cagcacagtcgctgtcttttccaagcactcttaaactcattgcaggcaagattaaaccaagcaacaaaagacatcaagcgatgcagggtaatacGTGATGAGCACTGTT----AGGCCCAAAGAGAAAACCCTGAGGTCCCCAGTGACAA--GGGATGCATCATTTGATCTGGGGTTTGAAGGATGGTCTTGATTTGGAAAGGTGGCTAGGGAGCAAGCTCGAGGTTGCCCCACACAGGGGTGCACAAGGCCCGGCTGGGGGACAGTGGGTGTCTCACTTGGGCTGACTGGAACAAGTTCCAGGTCACAGGTTTTTTTATTTGAATGTAATTATTTGACTGTAGTAGCCATCAGCAGATGGAGAGTTCAGAGGGACTGCACTGAAATAATGAATAA-TTTGCAGATGCAGTTGGTAGCCCTGGTGTCTTGGTGTGCCTTTCTGTTCCAGCAGGATGCGTGCAAAGAGTGGCTCACAGCCCCATCTGCTCTGCTCCTCCTGGCTCGAGCTTTGCTTTAATAACCTCTCTGTCACCTATTTACACGAGGTCATCCAGCTCCTCTTTTTCTCCTTTTCTGTGTTGAAATAATCGTGGCTGCTACTTGCTGTGAAAGACTTAACTAGTAGTGGGTAGGATTGACCTCTCAATTCAGTAAACATTTACTGAGTCCCCAGGACAATGCTTGCAGTGAGCATGC--AGAGG-AGGAGGT-GATTCCAGCCGGCAAGTGGAGGCAGagctcgagccagcaggcctggccactgcctggaagttggggggtgaggg----gggtgtggaaggtgagccagggtgcttagcctcagccactggggaatgcgaatgatagtcctgggggaaagagaaaacaagaggaggaacagatttgtgggatggagaacagtggggtaatgagctccatttgggacattt s mm3.chr6 111118085 1125 - 149950539 CTCTGGCAGACTAGACTCTAGGCAGCAGAGGAGGTGGCTTGGA-----------AGGAGAT------------------------------GATGCTCAGCCAGAATCATTGGGTCTTGGAT---AGGGCAGAAAGAAGTTTTAGTTCTAGAAGAGGTTTGGAAAGGAGAAGAGGGTGAAGAAAAGCTGTTTTCAA-CTTGAGCAGCTTTGGT-----------CCTGGGCATC--CATGC------------------------TAGAATAGTGACTGATAGATAGTAGCCAGTACTTATCGGG--------TGCAGTGTGCCAGGGGGGCTCCAAACACTCCATTCTG---------CTGTACTTACATCACTCTACGT-AAGTACACGCTCTGGCTTCTCCAAGAACTTATCAACTCACTGCAGACAGGATTAAACAAAGCAACAAAAGGCATGAAGTGATGCCAAGTAATATACAGTGAGTACAATTAGAGAGGCACAGAGAGAAAGCACTGAGGCCCCAAATATCC---AGAATGCTCTGTTTAGT-----GTTTGTAGAAAGGCTTTGGTTTGAATAGTAG-----------AGCCTGAATTCGCCTCAAA-----------------TGGTCATAGGACAGTGGGTATCCAACCTGCCGTGAATGGACCAAGTCTTCAGTTACAGGTTTTCTCACTTGAATGTAGTTATTTGACTAGAGTAGCCATC-ACAGATGGAGCGTTCAAAGGGACCACACAAAAATAATTAATAA-TTTGCAGGTGCGGTTGGCAGCCCTGGTGTCTCCATGTGCCTTTTTGTCCCAGCAGGATGCACACAGAGGGAGGCCCCCAACCCCATCTGCCCTGTGCTCCCGGGCTTAATCTGTGCTTTAATAACTTTCCTCTCGTCTGTTTGCATGAGGTCATCCATCTC--------------TTCTGTGTTTAAATAGTTCTGGCTATGACTTGC----AGGGCCATGTCTGATTGTTGGCAAGATTGGCTTCTGGGTAGAACGAACATTTATTGAGTCTACAGGGCTCTGCCTATAGTAAACAGGTAAACTGG-AATAAGTAGGATCTAGGTGTCAAAGGGCCTCAGA----------------------CTTATCTGGAAATTGAGGTTGAAGGGAGCCAGGTGAGAAAGGTAAGCCTGGGCAGCCAGCTTGGACCCTTG--GAGAACCTA-GGTAGTGATGGTAGAAAGGGAAAATGACAGGAAGAGCAGACTTGTGGAATGTG-------GGGACATAGTGCTTGATTTGGAACATTT s rn2.chr4 119731735 1139 - 183307734 CTCTGGCAGACTAGACTCTAGGCAGCAGAGTGGGTGGCTTGGAAGGAGCACTGGAGGAGAT------------------------------GATGTTTAGCTAGAATCACTGGGTCTTGGGT---AGGGCAGACA----TTTTAGTTCTAGAAGAGGTTAGGAAAGGAGAAGAGGGTGAAGAAAAGCTGGTTTCAA-CTTTAGCTGCTTTAGC-----------CCTGAGAACT--CTTGCTGGGGCACCTGAGAGACGTCAGTATAGAACAGTAGCTGATAGATAGTAGCTAGTTCTTATCTGGTTACTGCTTGCAATGTGCCAGGAAGGCTCTAAGCATTCTATCCTG---------CTTTACTTACATTACTCTACTTAAAGTACAAGCTCTGTGTTCTCCAGGAATTTATCAACTCATTGCAGACTGGATTAAACAAAGCAACAAAAGACATGAAGTGATGCCAAGTAATATACAGTGAGTACAATTAGAGAGGCACAAAGAGAAAGTACTGAGGTCTCAAACATCCAGGAGAATGCTCTGTTTAGT-----GTTTGAAGGATGGCTTTGGTTTGAACAGTGG-----------AGCCTTAATTTGCCTCAAA-----------------TGGTCATAGGACAGTGG--------CCTGTCATGAATGGACCAATATTTCACTTACAGGTTTTTCCACTTGAATGCAGTTATTTGACTGGAGTAGCCATC-GCAGATGGAGTGCTGTAAGGGACCACACAAAAATAATGAATAATTTTGCAAGTACAGTTGGCAGCCTTGGTGCCTCCATGTGCCTTTCTGTCCCAGCAGGATGCACACTGAAGGAGGCTCCCAACCCCATCTGCCCTGTGCTCCCAGGCTTAATCTGTGCTTTAATAACTTTCCTGTCACCTGTTTGCATGAGGT----CATCTC--------------TTCTATGTTTAAATAGTTCTGGCCATGACTTGC----AGGGTCATGTCTGATTGTCAGCAAGATTGGCTTCTGGGTAGAATGTACATTTATTGGGTCTACAGGCCTCTGCCTATAGTGAACAGGC--ACTGGAAATAGGTAGGATCTAGGTGTCAAAGGGCCTCAGA----------------------CTTATCTGGAAATTGAGGTTGAAGGGAACCAGAAGAGAAA-------------------CTTGGACCCTTGGAGAGAACCAA-GGTAGTGATGGTAAAAAGGGAAAATGACAGGAAGAGCAGGCTTGTGGAATGTG-------GGGACACAGTGCTTGATTTGGGACATTT a score=84732.000000 s hg15.chr7_random 683084 587 + 1057565 GAGTGATCTTCTAGCTGGGACCTGGATGTGAGGCTGGCATGTTTGAAGGTTGGTGAATGCCTGTTGACCTGCATGCCCCAACCGGGTGAACTCCTTCTACCTTTTGATTCCTAACTAATTGCAGTGAACAATACGCCAGCTTGTCTTCTGTAAAATGAGAGGGTGACTGTGCccaccagccttgctgctttggttggacaggtcagtacagtgccttgaaactctacttattcatctgtgaaatgaagggatttggcga-gatgccgcttaacgtgacttccagcactagcattttatgTAGGTCAGTGATCCTTTGTCCAGGGAGTGA--------TCTTTTTTCCAGAGGAACCGTTCTGCAGTTGCTGGTTAGCTTATCATCTTGGCAGggagcagcgtggtgaagcgagcagaacgtggcctccggagtcagcaaacctagttaaaatccactt----------gccgtaagtccgtcacgtggcttcgcagcgggcctcttggcaattagctgcttttcaccagtcctcaagtttcctcatctgtaaaatgggatgatgatatgtatttcaggtccggtgggtgagaatATGTATCAGGCA s mm3.chr6 111119210 571 - 149950539 GAGTGGTCTTCTAGTGGGTGCCTGGAGACAAGGCTGGCCCATTTGAAGGCTGCGGAACGTCTGGTTATC---------------AGGGAACTTTGGCTTCCTTTAG-TCCTTAACTAATTGCAGAGAGCAATACAGCTG-----CTTTGGTGACACAAGAGGGTGGGTGTACCTACCAATCTTCCCACTTTGGTAGGGCCAGTCACTTTTGTACTCT---------CTTATTCATCTGGAAAGTGGAGGAATTTGGCAAGGATGGCCTTTAATGGGACTTCTAACACTCACATTTTTTATTGCTCAGTGACCCTTCATCTAGGGAGTAATCTTTTTTTTTTTTTTCCAGAGA-GCCATTCCATAGTTGCTGGTTAGCTTATTATCTTGGCAagaagcagcatggtaaggtgaatggaatgtggcctcaggagttggcaaagctagcttaaatccactccatctgtgtgtccgtctgtccataatgaggctctgttgtgg--cccttgacaattatctgttcctctctaattctcaagtgtcctcatgtgtaatgtgggg-gatgacctgactttgagggtcactgga-gataatgtgtgccaggca s rn2.chr4 119732874 557 - 183307734 GAGCGGTCTTCTTGTGGGCACCTGGAGACAAGGATGGCCAGTTTGAAGGCTGCAGAAGGCCTGCTGAGC---------------AGTGAAC--TGGCTTCCCTTAG-TCTT----TAATTGCAGAGAGCAGTACCGCTG-----CCTTGCTGATTCAAGAGGGTGGGTGTGCTTACCAGTCTGGCCACTGTGGTTGGGCCAGTCAGTTTAGTACTTT---------CTTATTCATCTGGAAAGTGGGGGAATTTGGCAAGGACAGCCTTTAATGTGACTTCTAACACTCAGATTTTATATTGCTCAGTGACCCTTCATCTAGGGAGTGA-------TTTTTTTTTCCAGAGA--CCATTCCACAGTTGCTAGTTAGCTTATTATCTCAGCAagaagaagcatggtaaggcgaatggaatgtggcctcgggagttggcaaacccagtttaaatccaccctgtctgtgtgtctgtctgtccataatgtggctctattgtgg--cccttgacaattatctgttcctcaccaattctcaagtttcctcatgtgtaaaatgagg-gataaCCTGAATTTCAGGTTCATTGGA-GATAATGTGTACTAGGCA a score=167106.000000 s hg15.chr7_random 683701 1762 + 1057565 ttattgagatataa-------------ctc---acataccggaaagttcacttttttgaagtgtacagctcatcagcttttagcctgttcactaagttgtacatcaggcaccactgtccaattccagaacatt----ccatcatcccaaaaggaaatcccattcctgttaactcactccctattcgcttctccttctagcccctggcaaccactaatctattttctgtctctatgggtttgcctgtcctggacatttcattgaaatggaatcagacaatgtgtgatcttttgtgtctggcttcttttgcttagcatgatgtttttgaggttcatccatgttgtagcaggtatcggttcttcattgctttgtattgccaaataatgtttcacggtaggaatataccacattttgcttatctgttaatcacttgatggacatgcaggtggtttccactttttggctgttatgaataatcctcctgtgaacattagtggacatggttttgtgtagacatatgttttcagttttcttggtatcccattgtgtttttgatttgcatttccctaataattaataatgatcatcctgtgcatattgaccatttgtatgtcttctc---tggctaaatgtatattcagttcttcattcatttaaaaaattagg---ttgtgtttttattattgagttgtaagagttctttatatactctggatGTTGTACCTGGCTTTTAAATAGGCATACAATCAATGTTAGTTCCTCATTCCAGGTCTCTCGCAGAACCCTGTAGTCTTTTAGGTGACCTCTGGAACTAACTGCCCAGACACTTAATCCTCAGCATCCTGAGTCTTAAACCATCCCCTTATGTCTTGTTCAGAGCTCTTCTTAGCACAAAGCCCTGAGCCATTTTGATCCTGGAGCCCCAG--TCTGGAACTTGGAACAGCAGGGGGATAGGTGGGGTCTAGAGATGGGCTCTGGCTGAATCCA--CAGGGCAGTGGCTACTACCAAGTCTCATTTTTTTCTAGATGGAGGACTTAGGGGGTAACTGCACTGATT----TT-TGGCTGCAT-GGAGTCCTCTCTCCTGTGCTATGGACACCTGCATGTTGGGGCTGGGGCCCACAAAGAG--ATATGTCTAAGGACACTGGCTTCTTTCCAC--TGCCACTGCCAAGATGAGCAGCGGATTTTCCAAGAGTGATCTGGCAGTTGTAAGTTGTATATAAAAATGTCCCAAGGAAAATCATGTGTCTGTTTTAAAGAGAAGGGAGTTTTCTAGGAAACCTTT-GACCTGGACATTCTTCTCTATTCTGAGAACTG--TACCCTGTGCCCCCAAGATGTGATCTGTACTTTGTTGCCCCTCTGCTTTTGTGCCCATCATCTTCTTCCTCTATTTCTCCTCCCTGATGTGTGCAGCCCTCCCTTTCAGCCAGTAGGGAAAGGGAAACCTGCAGGGTCCG-----GCAGGGTCCCCTGTTCCTCCCCAACAAAGCCTCTTAGGTTTTCTTTGGCTGGGGTCTCTTCCTGCACACCTGGGGAAGAGGTGCCTGCAAAGCAGTGAAGGCCTTGGGAGTCCCACCTAGACTGTCCTCCAGAGAGCCA----TCTCCACTAGTTTG--------TGAAACTGCCATGCCACGTTTCTGTCCTAAAGACTTGGCCTTTCCTTAGACATGGATTTGATGGGTCCTGGACAGACGTTATTGATTGTTCCTCATAAGTCAGTCAAGACAGTTTATAGTCTCTGTTAATGCCCGGGAAATTTG---TTTTGGAAGACAAAGCCAGCCCAATGGCATTTGGATGAT--- s mm3.chr6 111120532 1573 - 149950539 ttattgagatataa-------------ctt--agtataccacaaa-----------------------catattcgttattagactactcacataggtgtactt----aattagtgtctaattcctgaacattttcatccttatcccccgaagaaacctcatctctgtg---ttactttccgttaact---------------------------------------tctttgtggatttgtttgtcctgaacttttcatgtaaatggaa---------gtgtagccttctgtgcctggcttattttcctttgcacaatattgcc-actttccccc-cattatagtatatatcagtgctttcttg-----------caaataatactctgtgccatagctgtttgctattttgtttgtctacaaat------------agatgagttgtttctactttgggactgtttcacataattctgccttaaatgtttgtgtacaagtttttgtatggacatatgttttaaaatttcttagcatatcattgtg--tttggcttatatttacctaatgactaatgatggtgtatatgtgtttattagtcatttgcatgtccttttgcatatagaaatatatagtatattctttactca-ttaaaaaaatgcatatttatctttttgttgttgagttgt-agagttctgtatatgctgtggataGTGTGCCTGGATTTGCAGCTAGCCCTCAGTCTGTGTTTGCCTCTCATCGCAGGTTTCTCAGAGAGGTCTATGAGCTTCTAGGTGCTCTCTAGGACTAATTTTCCTGATACTAACT-------------GTTCTTAAGCCTTCACCTTAGATACTT-TCATGGCTCCTTTTAGCTCCGAG-CCTGAGCCACCCTGATCCTACAG---CAGGCTCTAGAATCC---ACAGCAGCAGGATAGCTGGAGTCTAGAGAGGATGATTGGCTGGACCCATTTAGGA------CTGCTACTATCCCTCC---GTTTCTATGTGGA----------------TGTACAGCTTTTTGTTGTTGTTGCCTGAGAGCCCTTCATCCTGTT---------------TATTGGGGATAGGGATTATAAGGGGTTTTACATCT-GGGGTGATGACTTTTTTCCACTGTGCCACTGCAGAGATGAGTAATGTGTTTTCCAGGAGTGATCTGGCAATTTTAAGTCACATACAAAAACAGCTCAAGGAAAATCATGTGCCTGTTTTATTGACAAGAGAGTTTTATGGGAAGTCTTCAAAGCTA----------------CTGA-CACTG--AACTCTATG-TCCCAGTGTGTATTCTCTGCCTTGT-ACACCCTTGGTTTTAATCTCAACACCTTCTCTCTCC--TCCCCATTTCTGGCAGGCACA-CACTCCCTTTTTGCCAGTATG---ATTGACTCTCTCCATGTCCA-AGATAAAAGATCTTACATTCTCCT---GGAAAGTT--CTTGA-CCTCTGTGGCTAGGACCTCTTCATGGCTGCCAGGGGAAGGG--GCCTGTGGTGATACAAAGGGTCTGGAGGGCCCGCT-------------TGAGAGCTA----TCCCTGTCACTTTGAGAAGGTATAAAGTTGTAAAGGCACAGTCCCGATCTAAACACTTGGCCTTTCCTTAGACATGGACTTGGTGGGTTATGGACGGATG-TATTGA---CTCCTCTCAAGTTAGTCAAG--------TAGTCCTTG---GTGCCTAGGAGATGTG---TCTTGGAGGACAAGGCTAGCCCAGATGCCTTTGGTTGTTCAT s rn2.chr4 119734178 1552 - 183307734 TTattgatacatcatgaagtttaccctcttgaagtataccacaaa-----------------------cacattcgttattagact--tcacataggtgttctt----cattagtgtctaattcctgaacattt---tcctcatcccccaaagaaatctcatttccatg---ttacttcccattgagt---------------------------------------tctttgtggatttgtttgtcctgaattttgcatgtaaatggaa---------gtgtagccttttgtgcctggtgtattttcctttgcacaatattgtc-aatttcccccacattacgatatatatcagtgctttcttg-----------caaataatactttgtgccatagctgtttgttattttgtttgtccacaaat------------aaacgagttgtttctactttggaactgttatatataatttagccttaaacatttgtgcacacatttttgtatggacatatggctttaaatttcttagCATGTCAT--TG--TTTGACTTATATTTACCTAATGACt----------------------------------atattctttt---tgtagaa----ataatatattctttattca-ttaaaaaattgggtatttacccttttgttgttgagttgtaagagttctgtatatgccatggttacTGTGCCTGGGTTTGCAGCCAGCCCTCAGTCTGTGTGTGACCCTCATCTCAGGTTTCTCACAGAAGTCTTGGAGCTTCTAGGAGATCTCTAGGACTAATGTTCCTGATACTGACT-------------GTTCTTAAGCCTTCATCTTGTATACTG-TTGTGGCTCTTCTTAACTCCAAG-CCTGAGCCACTCTGCTCCTGCAA---CAGGCTCTGGCATTC---ACAGCAGCAGGATGGCTGGAGTCTAGAGATGATGATTGGCTGAACCCA-TTAGGA-------TGCTACTATGCCTCA---GTTTCTAGATGGAGCTGTTATAGTGCAGTTCTATAGCTT----TTGTTGTTTCC--AGAGTCATTCATTCTGTTCTGTGGCTATCCAGATATTGGGGATAGGGGTTACACTGGGTTTTACATCT-GGGATGATGACTTTTTTCCACTGTGCCACTGCAGGGATGAGTAATGTTTTTTCCAGGAGTGATCTGGCAATTTTAAGTCACATACAAAAACAGCTCAAGGGAAATCATGTGTCTACTTTGTTGAGGAGCGAGTTGTATGGGAAGGCTTCAGAGCTA----------------CTGA-CACTGACACCTCCATG-GCCCAGTGTGTACTCTCTGCCTTGC----------------------ATACCTTCCCTCCCCA-TCCCCATTTCTGACAGGTGCA-CCCTCCCTTTTTGCCAGTGTG---ATTGGCTCTCTCAATGTTCAGAAAAAAAAGATCTTGTGCTCTTCT---GGAAAGTTCCCTTGA-CTTCTGTTGCTAGGGCCTCTTCATGGCTGCCAGAGGAAGGG--GCCTGTGGT-----------CCTGGTGGGCTCTCTTG-------TTCCTGAGAGCTATCTGTCCCTGACACTTTGAGAAGGTGTAAAGTTGTGAAGGCACAGCCCTGATATAAATATTTGGCTTTTCCTTGGAAACGGATTTGGTGGGATATGGACAGATG-GAATGA---TTCCTCCCAAGTTAGTTAAG--------TGATCCTTG---GTGCCTGGGAGATGTGTCATCTCAGAGGTCAAGGCTAACCCAGGTACCTTTGGTTGTTCAT a score=180030.000000 s hg15.chr7_random 685474 1672 + 1057565 TTAAAGGGGAGAAGATACCCCTAGATGTGCAAGTCTTTTATAGGAACAGCTGTCTATGATGAGTCTTCATGCTCCTTTTGCTTCTCTGAACATTCTGGCATGCCCCTACCTAGCTGCTATTTTCTTGATTTCATAGAAAAGCACATTCTACCCTCAGAAAATCTGCTGTCCATTTGGAATGATAAGATAaatcagaaaattacccattgttagagctaaaagattccttggggattatccaatccattatttttcaATCTCCTATCCTGAC--AAAAAAGAGTAAGTGTTTTGTATGGAGAAAAAAAAAAGAAGTTTCCCTTtggtaaataaatttgggcttcagagcatattgtatatccctcttggagatccacggtgtgcactgcgatattaaagcctctgagaagtcctgcaaaaaagaaaaccgctttatttgattta-acccagcatttcttaaactgttttgaccTCATTTTTTTCTTCTTTTTTCATAATAAATATTAGCACctcacaggacactcagcccagtttggtaagcatggcctccttcatggaagaagaaatctgtgttcagaaatattaagtgacttgctcaaaatcaacacaaagccagacttgaagccaaattttctaactcccactccattgttctttctacAATTTATAACCAT-------------------GTCGTGGCTGAGTAAGGGT----------------------------------TTATG---------------------------------------------------------------------------------------ACTTTTAAAGATGTTGTCATTTACATTCCTaatggaaaatgtaaaggcattagggtcatactgacatgtgtttgaattcaggtcctctgattttacgagctcatgaccttgggggagcgaatcctgccagtctctctggatctctttcttctgtaaggtgaggatgataataatgac---ctcccagggttgccgtgaggcttagatgagagagtgtatgtaaagATCAAGTTCACGTTC-----------TTATCTTTGTTTTCTCTGACGTTTT-TCATCATACCAGGTTCTGTG-CCACTTATCTATGATTTCAAAAGACGAACCATATTACAAACAACAAAACGTGAATGGTGGTGATCATACTGAGTATTTATTGAATAGTGACTGAGAAAATGAATGCACAGGAGACAGGAGGAGTTACCTGTGAAAATTCAGAGCTATACTGAACTGATCAACGTTCACGGAATTGGAGA-AATAACAAAGGTGGGACAGGCTAGAGTGTGGAGATTAATGGGGGCTGAGGGAACAGGCTGTGCACTGGTAGGACATATTCAGGATCTCAAGCTACCTGCCTGCCACTTCTGCATCCCCACCGCGTCAAACTGTGGTTGAGCTTTCTTTATTAAATATGTAGCAGTTTGCTTTTGAAATACAATATCTTCAAAAACAAAAATAATGCCAGGCCTGCCAACAAAGTTTGTCCCGAGGGGGCAAAGGTGAAGGACAAGTGAAATGTTGCAAGAGGACAGGACGATACGAAGGATGGGGTCCAGAGTGAAAGAAGAGGCCTATGAGG--CTCAGCACAGTGACTCTAAGATGAAACCGAGTGTCTCCCCAGGGCGCACACATGGATGAAAAGTGAAGGGAATGAAAGAGAGAGCCAGCCATTCCAGGACTTCT---GCTCTTCTCTGCAGAA----ATCCTCCTTTCCTCACCAAC----TCTTCACCAACCCCCAAGCTTGC----TTAACTAGCTTTGGAATTTGTACTTTGTAt s mm3.chr6 111122268 1595 - 149950539 TTTAAAGTGGGGAAATACCTTTGTATGAATGAGGCCATTATAGGAATAGTTGTTCA-----------CAGACTACCCTGGCATCTCCGAACATCTTGACCTGCCTGTACCTTACTGAAATCT-----------TAGAAAA---------ACCTCCAGAAGGT-TGCTGACTAATTAGGATGCTACGGT-----GTAAAATTACT--GTGTTGTAGTTAAAAGATACCTT--AGAATAACCAATCCATTATTTTCCAGTCTTTTCTCCTGAT--AAAAAATATTAAATACTTGGTGTGGTTTAAA-------AAGTTTCTCTTTGATaaacaaatttgggctatagggtatattgcagg-ccctgttggtgattcacagtg-----------------agctctatgaagttctgcaataaagacaatagcttagtattattttaacctgtcatttcagaaacta-tttgaccCTACTTCCTTCCCCCC--------ATAAGTATTAACACCTCACAGGATACTAAGCACATTTTAGAAATCAT-CTTTCTTTTATAGCCAAGGAAACCTATGCTTGTAAATGT----TGACTTCTTTAAAATCCACAC----------TTGAATTTGTATTCCCCGACTCCTCCACTCTTGCTTATTCTACAGATTATTGCCTTCACATTTGAATATGTAGCCATCATGTTTGAATAAGTGTGTAGGGTTTGTTTCTTATGTTTCCAGGTAGTATCTCATGTAGCCCAGGCG---------------------CCACCTCAGTCTCCTAAGTGCTAGGATCGCAGCATATATATGAGCCAGCTGGA--GTTTTAAAAAATATTCTTATTTGTATTGTTAATAGCAaa--cacaggctttagagttagactgggaaacatttgaagtctgtccctgtcctttggccagcttatgacctt-gggtagctaggcctgctggtatccctgagtctgttccctctgca--gagagactgatgacaatgacaaactcacaggggtgccgtgatgattgggt--gaaaGTTTCTATAAAGATCATAACTGC---------------ATTTTTTCGTTTCCTCTGACTTTTTGCCATCACA-------------TCAGTGATCTGGGACTTTAAAGGCTGAG-CATATTCCAGATGCTAAAA-GCTAACAACAGTAATTGTAGTGGGTATGTACTGAGTGGCAACTGGAAGAATAAATGCACACAAGATGGCATGA-CTGCCTATGGCAATGTAGAGCTGTACTAAACTGCTAGCTACTCATGGGATTGGAAGTAACATAGAAGGCAGGACAGGTCAGAGC----AGATTTGCTGGGGCCAGGTGAACA-GCTGTGTA-TGGTGGGACAGATGCCAGCTCACAAGCCACCTGCCTTTC-TTTCTTTACCACCACAG-GTTAAAATGTGCCTGAG-----------------ATACCAGCATGCCTTTGGAATACAATTT-----AAAAGCAAAATAATGTCAGGCCTGCCAATAAAGTCTGTCCTGAGGAGAGTGGGTTGAAGGACAA---GAGCATTTCAGATGAACAGG--GGCATGAA------GGCCCAGGA---------------ATGGGGGCCCAGATATAGTGGCTGT--GCCTGAGCTGAGTGTTTCTT--GGGTAGATACATGAAAGGCA-----------------------TTCACTGATGCATAGCTCCTTGCTCTCTCTCCTGTGGAAGGATGTCTTCCTTACCTCATCAACCTGACCTACCCCAGCCTCAAAGCTTGCTTCTTTGCCTAGCTCT------------------ s rn2.chr4 119735729 1662 - 183307734 TTTAAGGTGGGAAAATACCTCTGCACGCATGAGGCCATCATAGGAATAGTTGTTCA-----------CAGACTACCCTGGCGTCTCTGAACATCTTGACCTGCCTCTACTTTACTGAAATCT-----------TAGAAAA---------ACCTCCAGAAGGT-TGTTGATTAATTAGAATGCTAAGGT-----GTAAAATTACT--GGGCTGTAGCTAGAAGATACCGT--GGACTATCCAATCCATTA-TTTCCAGACTTTTTTCCTGATTAAAAAAAAATTAAATACTCAGTGTGGTTTAAA-------AAGTTTCTCTTTGATaaacaaatttgggccataaagtatatcacatg-ctctcttggtgattcacagtgagcacaaccatattatcagctctatgaagttctacagtaaagacaatagcttaatattatttc-attggacatttcagaaacta-tttgaccTCA-GTCCCTCCCCCC--------ATAAGTATTAGTACTCTACAGGATACTAAGCACATTTTAGAAACCAT-CTGTCCTTTATAGCCAAGGAAACC--TGTTTGTAAATAT----TGACTTCTGTAAAATCCACACAAAGTCAAAATCTAAATTATATTCCCCATCTCTTACTCTATTGCTTATTCTACAGCTGGTTGCCATCA---TCAAATATATAGCCACCATGTTTGAATACATGTGTAGATTTTGTGTCTTATGTTTCCAGGTAGTA--TCatgtagcccaggctggtcttgcccgcccaatcctcccagttcagtcttctgagtgctaggatcacagcacatgtgtgaactagctgggttttTTTTTTAAATATTCTCATTTGTATTGTTAATaacaaa--cacagccattagagtcagactgggaaacatttgaagcctgtccctgtcctttggccagctcatgacctt-gggtagctaggcctgctggtatccctgaatctgttccttctgca--gagaggctgatgacaatgacaagctcacaggggtgctgtgatgattaggtgagagagtatctataaagATCATAACTGCattttttatttttttatttttttGTTTCCTCTGACTTTTTTTCATCACATCAGGGGCTGAGCTCAGTGATCTGGCACTTTAAAGGCTGAG-CATATTCCAGATGCTAAAA-GCTAATAACAATAATTGTAGTGGGTATCTATTGAATGTCAACTACAAGAATGAAAGCACACAAGATGGCATGA-CTGTCTATGGCAATGTAGAGCTGTACTAAACTGCTAGCGAATCATGGGATTGGAGGTAACATAGAAGGTA--ACAGGTCAGGGC----AGATTAGCTGGGGCCAGGTGAACA-GCTGTGTA-TGGTGGGACAGATGCCAGCTCACAAGACACCTGCCTTCC-TCTCTTTACCACTGTAG-GTTAAAATGTGTCCGAG-------------------ACCAGTACGCCTTTGGAATACAATTT-----AAAAGCAAAATAATGTCAGGCCTGCCAATAAAGTCTGTGCTGAGGAGAGTGGGCTAAAGGGCAAATGGAGCCTTGCAGAAGACCAGG--GGCATGAT------GGCCCAGGA---------------ATGGGG---CCGAGGCAGTGACTGT--GCTAAAGCTGAGTCTTTCTT--GGGTAGATACATGAAAGGC------------------------CTCACAGACTCATAGCTCCTTGCTCCCTCTCCTGTGGAAGGATGACTTCCTTACCTCATCAGCCTGATCTACCCCAGCCTCAAAGCTTGCTTGCTTGTCTAGCTCT------------------ a score=128879.000000 s hg15.chr7_random 687424 1254 + 1057565 GGAATTTGTACTTTTGCCTGGTAATTTAGTCCAGTGCCCAAACATGAAGTGTGAGTGTTTGTTTACTGCCAGCTTGGAGGGGACACATGCCTGATACTGACTCACCAGTTGCATTGGTGGTGGACTTGGCTCCTTCCCTGGGCTTCAGCCCATGTGTGCACCAGTCTGATCCCTTGCTCTGAAATATATTAGGACTAACAGGTGTGCAGGCCTCGAAGGACCCGTCTCTTTTGATATCTTCCTTGTCTAGTTGCTCTCTGATTTCTCATGGTCCTCACTCCCTCCGGGTCTTCTCCCTGCCAGTTTCTGAGCAGGCACTTTCCGGAGCACAGTGTGTGGATGACAGCAAATAAGTCCTCCGAGGCTTTGACCAGGAGCACAGACAGCTTTGCC-CTGGTGAGGGACGGTAGAGAGAGCACCAGTTTGCGTCCTGCTGCAGCTGCACTTTGCACAGAGCGCCTCTTCATCTGGCAAGCAAGCATGCATTGTGCCAACCCTCGTCTGCCATGCCAGGTGCTGGCTCTTTCTCCGGGGCGATACCAGGCTAAGCA---TGCTGCTGGCACTGAGCGAGTCAC-------------------AGCTTCTCTAATTTATTTACCTCAAATCAAACAAACCCTGACTCCTGCTTTGAATTTAGGCTGGTATTTTACCGAAGGACAGAAGGGCAGCATC-TCTGCAGAAGGGCCTTCTGTGCGCTTTGCCTGGGACCTCTGGG-GGACTTTGCAT-----GACTCCTGGGGACTTCAGGAGgccactttggaaaacaagtgtcaggtcctcaaaaggttaaacatagagtcgccacctgacctggcagttccactcccaggtatgtacccgagaggaataaaaacacgt----------------gtcca------------catggttgcatcgcag-caaaaaggagaagcagcccaaatgtccataagctgacaagtggatacacaaagtgtgcagtaatagtccactgaatattatt-----tggcaataaaagggaatggaatgttgatacatgctaccacatgagtaaaccttgaaaattttatgttaagcaaaagaagccagatggacata---tacatattgtg----tgataccatttatatg---aaatgtctagaacaggcaagtccgcagagatagaaagtagagattcatggtttccaggggctgtgggaagggggaatggg--gagtgactgctaatgggtatggggtttctgataatcagagtgatgataatattttgaaattagatagcagtgatggtcacacaattgtgttcaaaaccac s mm3.chr6 111123863 1208 - 149950539 GGAATTTGTACTTCTGCCTAAAAACG-----------ACAAGAATGAAGCCTTGGCATTTGGTTCCTGCCAGCTCTGAGAGGACCCATGCCCAACACTGAATCATCAATTGTACAGGTGGTAGACTTGATCTCTCCCCTAGTTGCCAGACCATAAGGGTA-CAGTTTCTTTATTCACTCTGGAATATACCAGGACTAACAGAC-TTTAAGCACTAATGCACCAGTCT-TCCTAATACATCCCTTGGATTACTGTTCTCTGTTTTCACCTGCCCCTTACCTCTTCCA-----TCTTTCTCCTAGTTTCTCAGTAGGCACTTTAAAGAGTATGCCCTA-GAGCAACAGTAAATAACTCTACTGAGTTCCTGACCAG--------------TGGCCTGTGAT--GGGACAGT-GAGAGCATGTCAGTTTGCATCCCACTGCAGCTGCTCCTTGCACAGAGTGCCTCTTCATCTGGTGGCCTGGTGCACATTGTGCCAG-CCTTGACTGCCATGCCAGGTGCTGGCATGCTCT-TGGGAGGATG-CAGGCCAGCCG---TGCTGCTGACACCAATTGCCTCCC---------------TCGCAGCTTTCCTTGCTTATTTGCCTTGAGTTGAACAGACCCTGAATCCTGCTCTGAATGTAGCCTATGTTTCTACTG-ATGACAGGAGGGCAGCTGTTTCTATAGAATTGCTTTCAGTGTGTCTTGCCTGGAACCATTGCCTGGAACATGTATGTTGGGACTTTTGGGGATTTCAGAAGgctaatttagaaaatgggtaacgattccttaaaagtctaaacatgaagtcctctcatgacccagcaaccccactctacag-ataaacccaagagtaatggaaaaattt----------------gctcaagtttcttgcagcattg-tgtgttgcagccagaaagcacaagcaacccagatgtccatca-ctgaggagtggagaaacaaactgtaccaga----tctattaaatggtctc---tgtggcagtgaaggagaatgaaatgcggacacgta------catggagaaaccttgagagacttctacaaagtgaaggaagaca-----acaaagcccacgggctgta----taattccacttatgct---gagtgtctagaataggcaagtccatagagacaggaagt--ggatcagaggttgccagggcctgtgggaaggggagatgggacagacgactg----------tgggatttctg---ttcagagtgatgaaaatgttttagaat----tagtgatgacaatcacatggctctttttgaaatcac s rn2.chr4 119737391 1121 - 183307734 GGA----------------------------------ACAAGAATGGAGCCTTGGCATT-------TGCCAGCTCTGAGAGGACCCATGCCCAGTACTGGATCGTCAATTGGACTGGTGGTGGACAAG-TCTCTTCCCTAGTTGCCAGACCATACGGGTA-CAGTTTCTTTATTTACTCTGGAATACACCTGGACTAAGAGAC-TTCAAACCTTAAAGCACCAGTCT-TCCTAGTACATTCCTTGG-TTGCTGTTCAGTGTTCTTGC---CCTCTGACTTTTTCCA-----TCTCTCTCCTAGCTTCTCAGTAGGCACTTTAAAGC------------ACCAACAGTAAACAACTCTCCTGGCTTTCTGACCAG--------------CCGCC-ATGAT--GAGACGGT-GAGAGCATGTCAGCTTGTCTCCCACTGCAGCTGCTCCTTGCACAGGGTGCTTCCTCATCTGGTGGCCTGGTGCACATTG--------------TGCCATGCCAGGTGTTGGCATGCTCT-TGGGAGGATA-CAGGCCAGGCGTGTTGCTGCTGACACCAATTGCCTCCCAGACtttttttttttttttttttttttttGCTTATTTGCCTTGTGTTGAGCAGATCCTACATCCTGCTCTG-------------------------------------------TCTATAGAATTGCTTTCAGTG-----------------------GAACCATGTATGTTGGGACTTTTGGGGAGTTCAGAAGgctaatttagaaagtgggtaacaattccttaaaagtctaagcatgaagttctctcatgacccaccaaccccactcaacag-ataaacctaagagtaatggaaacatttgctcacacatacttgggctcaagtttattgcagcattg-tgtgttacagtcagaaagcacaagtaacccagacgtccatca-cc-aggagtgtagaaacgagctgtaccata----tctatttaatggactcttttgtgactgtaaaggagaatgaactgtggacacgtg------catggagaaaccttgagaaacttctacagagtgagagaagaca-----acacagcccacaagctgtgtcattcattctattcatgctgaggagtgtctagcataggcaagtccatggggacaggaagt---gatcagtggttgccagggcctgcaggaaggagagatgggacaggtgac------------tgggatttctg---ttcagagtgatgggaatgttttagaat----tagTGATGACAATCACA--GCCCTATCTGAAATCAC a score=8391.000000 s hg15.chr7_random 688982 81 + 1057565 tgaactgtacatttttaaaatgtgaactttatggtatgtgagttgttatgtccataaagctgttacttta-aaaaTTGCCCT s mm3.chr6 111125071 80 - 149950539 tgaactgtacattttaagagggcaagctttgtgacgtggtaaataaaatgtcaaG--GTTTACTAGTTTTAAAAACCACCCT s rn2.chr4 119738512 80 - 183307734 CAAACTGCACATTTTAAGAGGACAATCTTTGTGACAT-GCAAATAAAATGTCAAGAAGGTTACTATTTTT-AAAACTACCCT a score=10646.000000 s hg15.chr7_random 689192 344 + 1057565 AAACTTACCTTTGTAGCCAAGTCCTTCATGGACAGGCTAGAGGTCAGAT--GGAAAGAAGTCAGAAAATTTATCTT---GGGCGAGGGCATTTATTCTGCCACTGTGGGAGAAGCACTGTGCCATGGGTGTGGAGGAGCAGTGTTCAGAGAGGAGTGTCCTGTGGCCTCCACAATATTCATTCAAAATTTGCCAATGTCTTGGACATCCTGGGTTCC--------------------------ATTCCCTGCCCGGAAATGAGTTCCTCTTTTTGCCTGGTAGATTTCAGTGATTAATAAATAAATGTTCATCCTTATACAtttaaaaacattttatttggaaatagtttccaagttactaaaaaattgcaaaaa s mm3.chr6 111125151 267 - 149950539 AAAC------ACGCAG-CAAACTCTTCAGAGAC-----ACAGGCCCTAGCAAAAAAGAGGTAAGGTAGTGTGCCCTAGAAGGTGCAAGCATTGATGTTTTCC---------AAGAGAGGAGCCA----GGTGGAAGAGCAGCACGGGGAGGGGATAG-------------ATAGCATGGGGTGGGGAGGGTGGGACACGGATGGTTCCCGAGGACCC----------------------------------------------------------------AGACTACAGTGGCTAATGAGT-AACATCCATCCATAGACAGTTAATGAT-TTTCATTTGGAAATAATTTCAAATTT----AAAAACTGAAAGAA s rn2.chr4 119738592 306 - 183307734 AAAC------ATCTAG-CAAACTCTTCAGAGA------AGAGGCCCTAAT-GGAAAGAGGTGAGGTAGTGCGCCCTAGAAGGAACAAGCATTGATGCTACCCCT------GAAGAGGGGAGCCA----GGTGGAAGAGCAACATGGGGAA--------------------------------GGGGGGGGGGCAACGTGGACGGTTCCTTATGATCCAAGGTGTTTGATTCATCCTTGGTGCCATCCTCTGCCTACAGCTAAGTTTCAACTGGAATCTGTTAGACTATAGTGGCTAATGGGTAAATGTCCATCCATAAACACTTAATAAT-TTTCATTTGGAA-----TTCAAACTT----AAAAACTGAAA--- a score=124830.000000 s hg15.chr7_random 690690 1374 + 1057565 CTTGGCAGCTCATTTTCCTGCAGTCCAGGAGAAAG-GTGGGCTTCTAGCGATTTTCAGCCATGGTTTGGGTGAAAAGCTGGGGTAATGAGCAAATTGCAGTGAT--TTTTATTCTTTCACTAACTGGTGTTAGAGCTTATCCTCCAGGGGATTTCTGGTGACTTA---ATGGGATTTCATGGCATGAGTAGG----------------TATGGAAAAC------------AGATTCCTGGGTCACTGAC--TTCACTTCCATAGACATTCCCCATCCCTTAATAATTCTTAGGA-TTTTGTGGGTGTAAAAGCTGGGAAACAAGAAATCAACGGGCTTATTATTCTTGTATCCTTTCCTATATTTCAAGTTGCCCCTTAGAATGTATCCTCATACGTCCTCCCACCTTTTTGTTTGGATTCAGCAAGTCTTAGAAGAGAAGAATCTTTAGCAAGGTAAGACC-----------TCGGTAGGAATACTATATGAGCCATGTAGTTTGAGCCAGGATGGAAAAGGGAAATGAATTCATGCAGAGAGAGTGGAAATGGAGCTGATAGCTTCATTTTCTGCTTAACTAAAACGGAATGAAAAGGGCTTGGCTGGCAAGGTCAGGACCA-CAAG-GCGAGCTGCTGAGAGCCGTATGGTGCAAGATGGCAACAGAGTTTCTACCCCTTGACCACCTTTTGAGAACTGACAGGGAAGACTCTTAGCGCTGGGCCTGTGTGGCTTGT-TTGGAGGAGTAAATTGAGTA----TACTTGATGCTAGTGAAAGAACCAGAGA-GCTTCCCTGCATCCAGCCGTTGGAAGGAAAACATACATTCGGA-CATTCTCTGTTAATATCTTATGCGTAACATGAGGCACCCTAGTTGGGTAA--ATGGCTTTGATTGGACTTTGTGGTTCCGCAAGGGTTGCTGTG-TTT---TGTAGGATTGTAGTTCCTGTTGTACTCCATAGCTCCAGCGTAGGCATTAAGTTTTTATGTTATTCGATAGCATCCTCCCAGCTTCAACAAAGGGTATTGGCCCAGGACAGTAACTCCTAGGAGT-GCCTGAGAGCTGATTTTGTTTCAGGTCAGCTCTGGCC-TTGGAGATGCCCTCCCTGGGAATCAGGGCAGAGCAGAGGGCATCTGTGCCAGGAGGGTGTGCTCTCCGCGTCCTGCTGTGGGAGTTCCCTCAGGGAAGCACCTTGGCCACCCTGACACTGGTGTGTGCGAGCCCCTTCTGGAAACAGAGTTGCAGTGCCCTGGTGAA------TGCTT---CTTCAGGGCATTGGCCCCTCTGTCTACCAGGTCATGCCTTCCTCTGCCACTTGAAGTCAGCAAGGACGCCAAAGGGGACCAGCCTTCCCT---TCATTCTCCTGTCACCTGATCCTGTGGCTTCC--ACATTATCGTGGTTCCTTTCCTACCTGTCAGTGCCAGGGTCTT s mm3.chr6 111125466 1284 - 149950539 CTTGGCAGCTTCCTTTCCTGCAGTGTAGG-GAGAG-ATGCATTCCCAGCAGGTTTATACTGTGGTTTG-GCTAAAGGC-AGGAAAGTAAGC-CCCTGCTGAGATGATTTTCTCCTGGAGCTCACTGG--------------CTTGAGGAGGCTACTGGTAACTCACTCAGGAGATCTGAGGCTAGGAGGAGGCTGCTGGTAACTCACTCAGGAGATCTGAGGCTAGGAGGAGTCTGCTAGCT-GCTGAC----CATTGCCTTGCAAGTTTTCTAACCCCCAG----TTTCCGGATTTTTGTGGA-GTAAAAGCTGGGAAGCAAGACATCAATATGTGTATTCTT----TACTCTTTTCTGTATTT-------CTATTTAGAATGTATTCTCAT----------ACC-TTTTGTTTTGATTTAGCAATTTTTTAGAAAAGAAACTATTTAGCAAGGTAAGGCTCACTGAAGAGATCAGCCGGACTACTGTATGAACCACATCATTTGAGCTAGGACAGAAAAGGGGAATGTGTTTCTTTAGGAAG-GTGGGAAGGGGGCCCTTAGCTTCATTTG-TACCTAGGTAAAACAGAATGCAGATG-CTTGGCTAGCAGGCCCAGGACCA-CAAGAGCTGGCCTGTGAGAGCCACACAG-GCACAGTAGAA------------------GACTGCCTT------------------GACATTT---------------CAGTTTGTCTTGGGGGAGCCAGCTGAGTGTGTTTGTTTGCTGCAGGTG-AAGTACCACAAA-CGTCTTCAGTATCCA-CCATTAGATGGGATGTACAAACTTGGATCATTTTCTTT--ATATTTTAGAGGAAACA-GAAGCACCCTGGTTGGCACATTTTTTTTTTCAATTCACCCAGTAGG---GCTAGAATTGTTGTG-TTTCCTTTTAGTATTGTGGCTTTCCTTAAATCTCACCCCTAT----TAAGGACTTGGATTTTATGTTCTTTTGTAGTGT-CTCCCAGTTTTGACTGAGAACATGGTC-----ATTGTAACTCAGGGGACCAGGCTGAGAGCTGATTTAGTTTCCAATCAGCTTTGGCC-TTAGA--------------AAATGAGGGCAGGCTGGATGGAAGCTTGGCCAGAAGTGTGTGTCCTCTGCATTCTGCTGCCTGTGGTCCCTCGGGGATGTACTTCACCTAACTGGACACAACTGTGCCTCATCTCTTTGTGGTGACAGAGTAG-AGTGCCTTTGTTCAGCCTGGCACTTGAACTGCAGGGCAT--GCCCTTCTCTCT------TCTCGCAGCTGTTTGCC---TGAAGT---------AGCCATCTGAGCCTGGGTTTTTTT---CCAGTCTGCTCTCTTCTG--CCATCAGTCTCAAGACATTAG-ATAGGTCTTCAGTCTCCTGTCTTTGGCTAGGCCTT s rn2.chr4 119738950 1266 - 183307734 GTTGGCAGCTTCCTTTCCTGCAGTGTAGG-GAGTGTATGCATTCCCAGCAGGTTTATACCATAGTTTTCACTAATGAC-AGGAAAGTAAGC-TCCTGCTGAGATGAATTTCTCCTAGAGCTCACTGG--------------CATGAGGAGGCTAT------------------------------GAGGAGGCTCCTGGTAACTC---CATGGGATCTGAGGCTGTGAGGAGGCTCCTGGCT-GCTGACCATTCATTGCCTTGGAAGTTTTCTGCCCTCGAG----ATTCAGGA-TTTTGTGGA-GTAAAAGCTGGGAAATAAGACATCATCATGTGTATTCTT----TACTCTTTTC--TATTT-------CTTTTTAGAATTTATTTTCATACCTATTCTCACC-TTTTGTTTTGATTTAGCAATTTTTTAGAAAAGAAACTATTTAATAAGGTGAGGGCTACTGAAGAAATCAGCCAGACTATTGTATGAACCAAATCATTTGAGTCAGGGCAGAGAGGGGGAATGGGTTTCCTTAGGGAGAGTGGGAATGGGGCTTATAGCCTCATTTG-TACCTAAGTAAAACAGAAGGGAAACG--TTGGCCAGCAGGCCCAGGACCACCAAGAGCTAGCCTGTGAGAGCCACATAG-GCAGAGCACAA------------------GACTGCCCT------------------GACATTT---------------CGGTTTGCCTTGGAGCAGCCAGCTTAATGCATTTGTTTGCTGCAGGTG-AAGTGCCACAAAGCCACTTCAGTATCCA-CCGTTAGGTGGAACATGCAGACTTAGAATATTTTCTTT--ATATTTTAGGGGAAACA-GAAGTACCCTGATTGGCACA--GTTTTTTTCGATTCACCCTGTAGG---GCTAGAGTTGTCATGTTTTCCCTTCAATATTGTGGCTTTCCTTAAATCTCACCCCTAC----TAAGGACTTGAATTTTATGTTCTTTTGTAGTGT-CTCCCAGCTTTGATTGAGAACATGGTC-----ATTGTAACTCAGGGGACCAGGCTGAGAGCTGATTTAATTTCCAGTCAGCTTTGGCCTTTGGA--------------GAATGAGGGCAGGCTGGATGGAAGCTTAGCCAGAAGTGTGTGTCCTCTGCATTCTGCTGCCTATGGTCCCTCGGGGATGTACTTCACCTAACTGGCCA-GGCTGTGGCTCATCTCTTTGTGGTGGCAGAGTAG-AGTGCCTTTGTTCAGCCTGGTACTTGAACTCCAGGGCAT--G--CTTCCTTCT------CCTTGCAGCTGTTTGCC---TGAAGT---------AGCCATCTGAGCCTGTTTTTTTTTTCCCCCACCTGCTCTGTTCTG--CCATCAGTCTCAAGACATTAA-ATAGGTCCTCAATCTCCTGTCTTTGGCTAGGCCTT a score=116758.000000 s hg15.chr7_random 692081 1307 + 1057565 TTGTTGTCTGCACCTTCCCTGCAGGTTCCTATCGCCT--CTCAGATGCGCCTTCATGGTGGGTGCC-AAGCC-----------------------------CCTGGCCACATGC-TTTCATTTCCCACTCAGAAGTGGTACCATTCCTCCCTCCCCTCTCAGCCACCTCC--TGTGACTCCTCAACAGAACAAAATCGAAACTAGGCACCAAAGACCTGCCACGCTGACTCCAGCCT----TTCCAGACCCTTTTGTCACTCACTGCAATGCAGAGCCCTCAACCACAGGCATGGTTT-TATTCTTCCTGATG-----TTCCCTTAGATGGGTTTGGTCCTGTTTTATCTTATTTTCATATTG-TGCTTTGTATTGTATCTGCACACTATCCCAGGTCCTGTAGGCAGTGGATGGCTTATGAATCTTAAATAAA---------------------------------AATGGGTCTCATCTGTCCCTGGAACCCAGTGCTCACTGGCCTCTGTGTTTCAGCTCACCCCTGGCTTCGCCTTGGGGTGCACTCTCGTGTGTAAAGGGGT---CGCTGACTCTGAGAGCACTCCATCCACTCTCTGAAGCCTGCACCGTTCAATGGGCAACAGTTGCGACTTCCTTCTGTGGTCAGTTATCTCTTCTCCCCTTGGCCCATCTCGTCCTGTTGACCTGAAAAACAGGTAGCCCTTTCTTTCACAATGCCAGTGGTCACCTGCCACTCTTGGGGTGGTGCTTGGACATCGTAGGTGCTCAGCAGATATTCCTGGATGCTGCTCACTCTGTCCTCTACAGTCCTCAGCCTAGCAGATTTGGAAATTTGACTCCATAAATTTAAGGATTATTGGGTTCTAAAAGACTGGTTCATACTAACTAATTCTATAAAAGGCTG----ATGGATCAATCTGAATCATTTAAAGAGAGATAATCCTAGCATCCAGAGAAGCTAGGCCTACATATCAAGGTATTTTCTCCTTGGTCAGAAGGTCCTCTCTGGAATCCCAGTAAGAGATGAGAAAGTTGCTTATTTAGCACAGAATTTAAGCAAAAGGCTTAAGTCGTCATGTACTTCTAAATGTATTTATAAATCATGAAAACATTCTCTGCTCATGGGATACTTCTC-TTAAAGAACCTGCATGGGATATCTAGAATCAAATATTCCCTTCCCACCTCGACAGTGAAAAACCTATGA--CTTACTTCTAGACTTCACTAAGATTAGTGTCAATTATCTTTGTAACATCATCTCTCTTTATTTAGGTATG--ACATATCATAGTTATACCAAGTTGGTAGATATTCTCATTAATTACATTTTACGTC----ATTTTGGAGTCACAAATCATACGGCTTGTCAAATCCTGGTTTTGTA-ATTTTTGAGG s mm3.chr6 111127493 1186 - 149950539 cTCCTGACACCATCTT-CATACAGGCTTCTATTACCTCACACATAGACACTGCCACAGTGGGCTTCATAGCCCACCACAGATAGCATCACAGCCATCAGTCTTTGGCTATACAT-ATCCATTTCCCATTCAGAAA----------CCCCACTCCCTTCTCTACCGTATCCATTATGCGTC-----CAGGACAGAATCAAAACCAGGTGCTGGAGACCTCAAACTCAGACACCAGCCTGTCTCTCCAAATCCATCTG----CTGCTGTCCTGATGAG--CTCAGCAATGTTCAGCATTTGCATCTTCCCCTGTAAGGGTTCCCTGTAGAT-GATTTGGTCCTGCTTCATCTCATCTTGATTTTGATGGTTTG--GTGTATCTGCAAACCATCCCTGGTCCTGTGAGAGGTAGATATCTCATAAATCTTAAATAAA---------------------------------GGTAAG--------GTCATCA-----------------GCCCTGATACTT-----------------------GGGCCCCTTTCTCC----TATATAGAT---ATCCACCACTGGGAGTGCCTTG-----TCTCTG-AGTCAGTGATATTTGATTGGTGAGGGTCATAGCTGCTTTCTGTGGTCAGTTATCTTTTCTGGTCTTACTCCACAGCATGCTGGTT-TTTTAAAAAAAAGCAATACTTT---------------------TGTACCATTT---------TGCTTGTACAT-ATACATACTCAGCAGATAGTTTTG---ACTATTCACCATGACCTATAGAATCCTTAGTTTAGCAGATTTGAAAATCTGACTTTAAAAATTCTAGGATTATTTGATTCTGAAAGTCTGGTACAAGTTAGTTCATCTTTGGAGTGGCTGGCTAGTTGCTTACTCTGGATTGTTTGAATGAATG-AAGCCTAGCAGCCAGTCAGG---------------AGAACCTCACCTTTATGGTTC-AAGGCCTTATCTGGGATCTC---AAGAGAACAG--AGGTGCTTGTTAAGCACAGAG-CTAACCAAAAGGCAT--------ATAGATGTCTAAGC----------------AGAACGTCTGCTGTGGAGGAGATGTTTGTCTTTAAAGAATCTGAGTAAAAC-TCCAAACCCAA------CACCCTTAGCTTATCAGTGGGAAATCACAGACTCTCATTCCTAGACATCACCATGACCACTGTGAACTATCCTTGTAAGG-------ACTTTATTTTGGAATGTTTCATAT-ACTGGGATTGCAAATGTATGGATATTATCATTAATTACACTTTAGGTTGGCAATTTTGGAGTCATAAATCAGATAACTTGTTAAATCCCGAATTTGTACATTTTTAAGG s rn2.chr4 119740708 1171 - 183307734 ---------------------------------------caCATAGACACTGTCATGGAGGGCTTC-TGGCT-------GTTAGCACCACAGCCATCTATCTTTGGCTATACATGATCCATTTCCCATTCAGGAA----------CCCCACTCCCTTCTCTACCATATCCATTATGCCTC-----CAGGACAGAATCAAAACCAGGTGCTAGAGATGCCACACTCAGATACCAGCCTGTCCCTCCAAAGCCACCTG----CTGCTGTCCTGACGAG--CTCAGCTATGTTCAGCTTCGGCATCTTTCCATATA------CCCCATAGAT-GATTTGGTCCTGCCTCATCTCATCTCCACTTTG-------------TATCTGCAAACCATCCCTGGTCCTGTGAGAGGCAGATATCTCATACATCTTAAATAAATAAAAATAGATCCAATCTGTCCCCTCCCCACAAGGTGAG--------GTCCACA-----------------GCCCTGATACTTCAG------------TTCCTCTTGGGCCCCTCTCTCTCTCATATAAAGATTCTATCCACCACTGGGAGTGCCCTG-----TCTTTG-AGTCAGTGATATTTGATTGGTGAGAGTCACAGCTGCTTTCTGTGGTCAGTTATCTTTTTTGGTCTTATTCCACAGCATGCTGGCT-TTTCAGAAGTAAGCAGTACTTT---------------------TGTATCATTT---------TGCTTGTACAT-ATACAAACTCAACAGATAGTTTTG---GCTATTCACTGTGGCCTATAGAATCCTCAGTTTGGCAGATTTGAACATCTGACTTTAGAAATTCTAGGATTATTTGATTCTGAAAGTCAGGTACAAGCTAATTAATCTTCTGAACGACTGGTTAGTTGTTCACCCTGGATTGTTTGGATGAAGATAATCCTGACAGCCAGTCGGG---------------AGGACATCACCTCCATGGTCC-AAGGCCTTTTCTGGGATCTC---AAGAGGACAG-AAGGTGCTCGTTGAG--CAGAG-TTAACCAAAAGGCAT--------ATAGATGTCTAAGC----------------AGAATGTTTGCTGT---GGAGATGTTTGTCTTTTAAGAATCTGAGTAAGAC-TCCAAA-CCAA------CACCCCCAACTTATCAGTGGGGAGTCACGGACTCTCATTTCTAGACAGCACCATGACCACTGTCAACTATCCTTGAAAGG-------ACTTTAGTTTGGAATGTTTCATAT-ATTGGGGTGGCAAATTTATGGATATTATCATTAATTACACTTTAGGTTGGTAATTTTGGAGTCATGAATCAGATGACTTGTTAAATCCTGAATTTGTAGATTTTTAAGG a score=142894.000000 s hg15.chr7_random 693403 1600 + 1057565 ATCTGCAGATCTCTATTTATAAATTAGTACAGCATAACACTCCTATGAGGGAAATGATAAATGTGTGTGCCTT--GATTCTAGAAATCACAATCTAAAACACCATACAAGTTAGGAGTCCACAGTAGTGTGTATTTGGCCATTAATGAATCAGTGGTCCCCTGGGTGTGTGAGCCATGCTATTTTTAAAACCATTGCTGACTTCAGTGATAAAGAGAGTACAGAATGTGCCTTCCCAGGCTTGTGAGCTTACCATGAATAATACCCATGGTTATCATGATGTCAGAACTTAAATATTCTTTACCAAGAGCACAACCGTGGCGTCATGGAGCATGGGAATGCATTTAGGGGGCAGGGTGTGGAAAGTCCATTTTTCCCAGAGAAAACATCAGCCCAGGGTAAAAGCTGATTCTCCCATGGGGGCACTTAGGCCTGTATGCAGCAGTG-CCAGACTCC----------TGTAGGGCATCTTCCCATTTTAGTCACCAGAGAGTGATTTGCGTCAAAGTTTGCAAACCAAAC---------CAGA--GCATTTGTCACTGAAGATCCCGTGCCTTCCACTTGTTCAG--AAAAGTTATTAGGTGGGGGATTAGTACGTGCACACTTGAAATCACTAACACTGGTGGTGATGAGAGTAGTTTCATCATTTGACACATTGATCTC-CTGAAGCATTCTCCTGGGGAATGGAAGTGATGCTAAAACATGGAAGAAAGGGACTGAACTATTTCGGAATTTTAACGTTGTCTTTAAAAACGTGTGCTCTGGTTTTGCTAGGTGAGCATGCTGTGCCTCACAATAGAATTACACTAAACCACGTTAATTGTGACTCATTAGGGATGGCAGCATTAACGAATATTCCAGCACTGgttaggatggcctaagttgtacagcagtaacaaacaacagaggtttgcttcacacttgcgccacatcttgggtcagctggggtctctgctctttgttaccctctttcactgaccaggcaaaggagctgctcctccccagaccatggttggttaccgtaatataagggaaagagg----agtcacacactggccggaaaggcttttgcctgagaatgctacttcttgcgta----cttc-------------------------tta------ttgtccaaggtggatcatttggccaagactaa-ttctaagTTACATGGCTTAGCTTACCTGAATTACAGCACAGCTTTTCAAAGTAATGGGTGCAAGACAACGTATTAGGATACAG-------------------AAGAAAATTTGAATATGTAT-ATTTTATCTCACTTTA-TCCTTTAAATTTTTC-------------------TATATTTGTGTTTTTGGT---------TAACAATACTGTATTGGAAAGTA---AAACATAGattatttttaattataaaaatCACA---------------TATATCAGGAGTGTTCTCTTTTCCCCTGATTAAGTGCTTAATCAAAAAA--------GTTGAGATCATTGTTTATACAGTAGATACAAATCTGCAATAAGCAT---ATTGTACATAGAAACTGGGTCTCAGTTATGA---CCAAGGATAGTGCTTTTGGTTAAAATGTTACATGGAAAAGAGATGCAGAAGCTTTGAAAGTAAATTCTATTCTGT-GTTAGCTAGGCCTCTGGGAGCTAGCTGACCACCCTCCCCTCAGTTTTCACTAAACGCTTGTTTAGGACt s mm3.chr6 111129181 1467 - 149950539 aTCTGTAGGTCT--------------GTACAATATAATACTTCTACTAGGGAAGTGGAAAATACCTATGCCTCAAAATCCTGTATA--------TAAAATTCTGTATAATTTTGGAGTCCAGAGCAGTATTTGTTCAGTTGTTAATGAATCATTGGTACTCTGGGTGTGTAAGCAACGTTATTTTTAAACCCATTGCTTACTTCAGTGATAAAGAGGGTACAGAATGTGCCATGCTGGGCTTGAGAGCATACCATGAGTAATATCCATTACTACTATGATGTCAGGACTTGAATATTCTTTACCAAAAAGATAACCATTGCATCATGGAGCTGAGGAATCCCACT--GGAGCAGAGTGAGAAAGGCCCATTCTTCTCATAAGAAACACCAACATGTGATAAAAACAGATATTCCCCTGCAGGAACCCAGACCTGTTATCAGTAGTGTCCAGGCTCT-------GTTTGAAAGGCAGC-TCTCATTTTAGTAACCAGAAAGTGACTTGCCTCTAAGTTTC-------------------CAGGAGGCATTTTTTA------ATTCTATACCTTCTGCTTATTCAG--AAAAACATCTAGGT-AGTAATTGTTGTGTGCATACTTGAAGTCACTAACACTTATGATGGCCAGTGTCATCTCATTATTT-ATACCTTCATCTCTCTGAAACATTCTC----------------ACATTAAAATAAGGAAGAAAAGGGTTAAACTACTTAGAAGTTGT-ACGTCATCCTCAGGAGTGTGAGCTCTGGTTTTGATGGCTAAGCACCTTGTGCATCAAGACAAAACCACATTCAGCCAC--------------------AATGGCAACAT--AAGGAAAGTAGAGTGCTCCTTAGATGGTTCTGATACACACAGCAACAGA-------------TTGC-TCACGTGCATGCTCCA--TTGGGCCA-CTGAGG--------TCCTCCAGTCCCCCT----------GGCCAAACAGCTTCTCCTCCTTGGATCAGGGCTGCTTATA-TA--GCAAGGGAAAGAAGACAAATTCTCACCCTGGCTTCAAA-GTTCTGGCCCAGAAACAATACCTCTCTCACACCTTTTTT-------------------------TTAAAAAACTGGCTTAAGGCCTCACTTGTGGCCAAACCTAACTTTTGTATTATATGACTTGAGTCTCTTAAGTTCTAGCAGGAACTTT--GAGTGAAAGGCTCAAGAAAAGTTACTAAGATTCAGTAA----------------AAACAAACCGAAACATTTATAATTTTCTAAGACtttatttatttataattttattataacttttttatttataatttttGTGCTTTCAGTAGGCATTTTTAGTAACATGGAATATGAAAATACATAAAAAGAAATGCTTCACTTTCATAATTGTCCTAATACAAATCTCTTCTCATTTCA----------TTTTTTTTCTGCTCTCTTGTTCATTCATAAAAACCTGCATGCCGCATCCCTCACCTTTGCC--------------------AGCAT---GCTGAGCATTG----TGAGTACCAGTTTTTA---CAA---------CCTATCCTCA--------------------------------------------------TGTAATTTGATA-ACCATGGTGGGCTGGCCAGCCTCACACTACTTGTTTCTCACTATTCATCtttttaagagt s rn2.chr4 119741894 1450 - 183307734 ATCTATAGGTCT--------------CTACAAAATAATACTTATACTAGGGCAGTGGAAAATATCTATGCCTCAAAATCCTGTATA----------------------ATTTTGGAGTCCAGGGCAGTATTTGTTCAGTTGTTAATGAATCAGTGGTACTCTGGGTGTGTAAACACCGCTATTTTTAAACCCATTGCTTACTTCAGTGATAAAGAGGGTACAGAATGTGCCTTGCTGGGCTTGAGAGCATACCATGAGTAATATCCATTACCACTATGATGTCAGAACTTGAATATTCTTTACCAAAAAGATAACCATTACATCA-------------------T--GGAGCAGGATGAGAAAGGCCTATTCCTCTCAAAAGAAACACCAACACATGACAAAAACAGATACTCCCCTGAAGGAACTTGGACCTGTGATCAACAGTGTCTAGTCCCTATGGCCAGTTTGAAAGGCAGCTTCTCATTTTAGTCATCAGAAAGTGATTTGCCTCTAAGTTTCCAGAAGGCATTTTTTTTTTCAGAAGGCATTTTTTA------ATGCT-TACTTTCTGCTTATTCAGAAAAAAACTTCTAGTT-GGTAATTGTTGTGTGTATACGTGAAGTCA-TAACACTTGTGATGGCC-GTGCCATCTCATTATTT-ATATCTTAATCTCACTGTAACATTCTT----------------ACATTACAATAAGGAAGAAAGAGACTAAACTACTTAGAAGTTTTAAAGTCATCCTGACAAATGTATGCTCTGGTTTTGATGGCTGAGCATCTTGTGTATTGCAACGTAACCACATTCAGCCAC--------------------AGTGGGAACATTAAGGCAAACTGTAGTGCTGCTTA----GCACTGTAGCACACAGCAGCAA--------------------CACATGCATGCTCCA--CTGGACCA-CTGAGGTCTTTGCTTCCTTCAACCCTCCTCCAGTGCCCAGGCCAAACAGCTTCTCCTCCCTAGATCAGAGCAGCTTACC-TA--GCAAGGAGAAGAAGACAAATTCTCACCCTGGCTTCAAA-ATTCTGGCCCAGAAACAATACA-------------CTTTaaaacaaaacaaaacaaaacaaaaATCAAAAAACTGGTGTAAAGGCTCACTTGTGGCTAACCCTAACTTTTGTATTATATGACTTGAGTCTCTTAAGTTCTAGCAGAAACTTT--GAGTGAAAGGTTCAAGAAAAGTTACTAAGATTCAGTAAAATcaaacaaacaaacaaacaaacCCAAACATTTATAATTTTCTAAGACTTTA-----------------------------------AATTTTCGTGCTTTCAGTAGGCA-TTATAGTAACACGGAACATGAAAATTTATAAAAATAAATGTTTCACCTTTATAATTGTCC-----------------CACTTCA-----------TTTTTTCCTGTCCTGTTGTTCATTCATAAAAACCTGCAGGCTGCATCCCTCACTGTTGCCG-------------------GGCATGCCGCTGAGCATTG----TGAGTACCAGTTTTTAGTGCAA---------CCTATTCTCA--------------------------------------------------TGT-ATTAGATA-GCTATGGTGAGCTAGCCAGCCTCACACTCCTCAGTTTTCACTATTTatcttttt-agggt a score=47706.000000 s hg15.chr7_random 695431 795 + 1057565 TCACTATTTTATacacacacacacacacacacacacacatatatatataatatgttatatatattatatgttatataatgtcatatataatatatgttatatatagttatatatatatatgttcatttactcctcacaaggaccctatgaaatatgattactgtctccactttagagatgaggggattgaggcagaaaggggttaagtaacttgctgagatcacagagctagaaagggcagcactggcatctgacctagTTGTTGAGAATGCAGAAACAATCTGAAAATTAGCTCTTGGAATACAGACCCCTATGAAGATAGGGATGGCCTACATCACCAAATGCCATCCTGTCTGTTTTAAAGCAAGACATAGGAGAGCTATCAGACATCTTAGATGTACGTGGGGAAGGCGCCCCGCTACAAGAACCAGTATTATCTGAGTGGGCACCTCCTCCCAGCACTGGGTGTAAGTGGCTCCGTGCCATGGAGTTGTTGGGTAATAACGCCA--GGACTGGCTTGATGACAGTGACTCACAGTAGAAAAATGTCCTTGCAACAGACCAAAGAACCCACTTT---AATTTGCACAGCTTAGAA--------TGGGCCACTGGTTGCCCTGCCAAGGGATCCCTGTACCAGCTGATTTTCATATCCACAAACACACACACAAAAGCACCTATTTAAATATTGCAAATAATACCACATTGCATTTTTATTATGCTTTATAGTTTACAAAGCACATTACAATGCTACTTTATTATTCTTAGTGTGCTCC-AATATAATTTCACTTGCCTTCTCTTT s mm3.chr6 111130648 644 - 149950539 tcactgtgtgccagagttagaaacaga-aaacaca-----------------------------------------------------------------------------------acacttgtttaatgcacacaaagcccttgtgatttactgctattatccccactttctaggggaaggaatt----------gaggttaagtggcctgctggatacatagGGGTAGAA----------CTGCTTCTGGCATAGCTGGTAGAGACACAAAAATGATCT-AAAACTAATCCTTGGAGCCCACAGCACAGTGACACTGGAGAGGACCGATATTG--TGAGGCTATACCATCTACCAC--CACAGTGTAC--------CATCTGACATCTCAGCCATGGCCTGAGACA----CCAATGGCAGGGACCCATGTGA---GAGCAAGCA-CTTCTGCCAGCTGTAGGT-CAAGTGGCTTAGAATTATGGAGCTGTTGAGTAATAATATCAGGGGATATGTTCAATGACAGTGACTCACAGTAT---AATGTCTTTGTGAAAGACCACAGAACCCACTTTTAGAGTCCGTGTGAGTGAGCG--------TGGACTGTTGGATGTATGGATAAGGGATC------CCATCTGCCTTCTATATCTGCACATGTATGCAGACACACACACATTACCAT---------------ACACTGCA---TTATTGTAGTCCATAGTTTCCAAAGCGCACGGCAGTG----TTTACTATTCTGAGGGTGCTCCTGATTCAGGGATTCTTATTTTCTCTTT s rn2.chr4 119743344 598 - 183307734 tcactgtgtgccagagttgtaagcatagaaacaca----------------------------------------------------------------------------------tacatttgtttaatttacacaaagcccttgtgatataatgttattatccccactttttagatgaaggaattgaggcacagagaggttaagtagcctgcTGGATACATTGGGGTAGAA----------CTGCTTCTGACATAGCTATCAGAGACACAAAAATGATCT-AAAACAAATTCTTGAAGCCCACAGCACAGTGAAGT--GAGATGGTTGATATTG--GGAGGTCATCCCATCTACCA---CACATTGCACATGAA---CA-CTGTCATCTCAGCCCTGACCTGAGA-----------GGAAGGGATCCATGTTC---GAGCAAGCA-CTTCTGCCAACAATAGGC-TAAATGGCTTAGAATTATGGAGCTGTTGAGAAATAGCATCA-GGGATATGTTCAATGACAGTGACTCACAGGAG---AAGTGATTTG--------CACA--------------------TGTCAGTGAGCATAGACTGCTGGGCTGCTGGATGTATGACCAAGGGGTC------CCAGCTGACGTCTATATCCGCACACATATACAAACAGACACACA-------------------------------------------------TTTCCAAAGTGCATGGCAGTG----TTCATTATTCTGAGGGTGCTCCTGATTCAGGGATCCTTATTTTCTtttt a score=162185.000000 s hg15.chr7_random 696226 1401 + 1057565 TCTCACCTTTTTCTCATCTTTAGTTTCTTTTTCCTTTTCCTCTCAGCATCCGTGCCAAC--TTTCCCCACACTCCAGCTTTCTTCCTTTCGTTTCTTCCTGCTCTTCCCTCTCCCTGCGAGTTGTGGAGGTGGTACC--------TTTCCCGAAGTGATCCCTAATTGAGTTTAGTCAGGTGTCAGTTAAAGGCAACTGAGGGGAATGAAACAATTCTCCAAGGAACAAAACAGTTGTAACATGGAGCTCCTGTTGTAAATAGCAGTTGCTATTTAAATCAAGTAAGAAGGATGGATTATTGTGCTTTAAGA-AGGGGATGAAATGAATCCTGTATTTAAAGAGAGCCTGGGGGAA-AGGGTTATCTGCATCTCACATCCCCGGCATCACTGTGTCTGCAAAACATCTTTCACAAAGTTTTCTTTGCAGTTAGAGAACAGCCTGTGAGAGAAATGCTCAAAGAAATACATAAACATGAGTACAAGGGGTGTGCAAACAGGTGTTGCACTGAGCGCAGAACCCAGATGGCGGCCCTTTGTCCTGGTTCCTTTGTATAACTCAGCAAGAAGTTGAGGTTTAGAAAAGGCAGGTTTGAGGAAGTGCCGTCTGTGGCCTCTTAACTGTGGACGTCACTGATGAGAACAGATCGAACTTT-AGATGCCTTCCTTAGAAATTTTGTTGTTTTGAAGTCAAACCTCAATCACAATGAACAAATATATTTGCATAAGGAGAGGAGGTGTATAGTGCCCTGGCAGGAATTAAGACTAAAACGTGGGAGTAAAG--CTGTAGATGCTTCTGTTGCTTTTTAACCAAGAGGCCACAGACACAGGCCGG-GAGGCTGAGAGGGCAACCTGCCATTTGGCCAGCGTCACTTTGCGATTGTTATAAATACTTTATCATAG-CTTGAGTACAGACATGCCTTT-TCAATGAAATACATCCTGACTTATTTTGCAG---AGGgtactagtttcatagggtgactgtaacaaattaacacaaactattaataggtggcctaaaacaacagaaatgtcttctctcacagttttggag---gagttggcagggccacgttccctcgaagactccaggtaaatccccttcttgccttctctcggcttctgatggctcccaacaatgctgggcatcccttgggttacagctgcattgctccagtctctgcctctgtcgatgtgtggcccgcactctgtgtgtatgtctgtgtctcctcttacaaggacaccagtcatatgggattacggctcaccttaatgaatttattgtaacttgattacctctgaaaagaccccatttccaaaaaagatcacatt----cacaggtactgggggttagga-cttaacatatcttttgggaggacacaTAGTAATAGAATCTACACAGTTTTTAGTTTAAATGAAAATT s mm3.chr6 111131410 1262 - 149950539 --cTGCTTTGCTC----------TTTTTTTTTTTTTTTCCTCCT----TCC---CTAAC--TTTCTC----------------TGCCTCCTCTCCTCATTGCTCTTGCCTGCCCTTTCAGTCACAGTAGGTGACACTTCCTCTGCTTCCCTAAACTGACCTGTAACTGAATTTAATCAGATGACAGTTGAAAGCAGGTGAGGGGAATGGCAAAGTTCTCCAGAGAATAAAAAAG--GGAAGGTAGAGTTGCTGTAGCAAATAG-GGTTGCCACACAGACC-AGCAAGAGCAGCAGATTGTCATACCCTCAGACGGAAGGT-GAATGAGCCCTGCC-TGAGAGACTTCTCAGGGAAAGCAGGGCCCATCCATTTCCCATCATCAGCCTCACTGCGCCTAGGCAACACGCTCCACAAAGTTCTCTGAGCAGCTGGCTGGCAGCATCTGAGA-AAGTATTCAGAGGAACACATAAAGGTGAGGAC-AGAGGCA-GCAGCTGGGTGTGGCAGTGATAGCAGA-------------CCCTGTGTTACGCTCCCCTTTCCTACCACAGCAAGAAGTTGAGGTTAGGAAAGG-------TGAAGTCTTGTTGTTCCTG---TCTGTGCTCTTAGGATCCCCAGTGATGACAAAGTGAAGTTTCATG--------------------GTGTTCTGAAGTCAGACCTCAGTCATGATGCATGAATGTATTTGCATCATGA-ATTAGTTGTTCAGTGTCCTGGCTGGAATGGGAACAACAGTGTTGGAGGAAAG--CTGTGGATACTTCTGCAGCTTTTCTGCCTAGAGGTGACAAATACAGGCTGTGAGGGCCATGAGGACAAGTTGCCATTTGGCTTAAGT--------GACAGCTAAAAATACTTTGTTATAG-TTTGAATGCAGACATGTTTTTCTCAGTGAAATACATCCTGAATTGTATTACAGAGTAGtatattcctttcctagagctactgtaacaaagtaacacaaac------caggtggctgagaaccacagaaatgtaagcttctgcagttctggagccgcagatgggaaacaaaggt---------gtcaccatgtagaactcttt--ttctcttcctagggtcttg-taga-ccctgtagtctatggtgtatcttacattgcaactgcgtt----cagtttctgcctgtgtcattatgtgg-----acttt---------------tcttttcttataaaggcgccagtcaggttggattaggactcaccctaatgacctcatcttaatttgattatacctgtaaagaccctgtttccaaataaggccacatt-atagacagctgctgggagcaggaagttcaacacaCCCTTTTGATGAACAGATAGTAATAGAA-----------------------AAGAATT s rn2.chr4 119744110 1276 - 183307734 --ctgccTTGTTCT---------TTTTTTTTTTTTTTTCCTCTT----TCC---TTAACTGTTTCTC----------------TGTTTCCACTCCCTATTGCTCTTGCCTATCCTTTCAGTTACAGTAGGTGACACT---TCTGCTTCCCTAAAGTGACCTGTAACTGAATTCAGTCAGATGATAGTTTAAAGCAGGTGAGAGCAATGACAAAGTTCTCCAGAGAACAGAAAAC--GGAAGGTAGAGCTGCTGTAGCAAATAG-GGTTGCCACATAGAGC-AGCAAGAGTAGCA-ATTATTATACCCTCAGACAGAAGGTAAAATGAACCCTACCTTGAGAGACTTCTCAGGGGAGGAGGGGCCTATCCGTTTCCCATCATCAGCCTCACTGTGCCTAGGCAACACCCTTCACAAA-TTCTCTGAGCAGCTGGCTGGCAGCATCTGAGA-AAGTATTCAGAGGAACATACAAAGATGAGGACAAGAGGTA-GTAAGTGGGTATGGCAGTGACAGCAGA-------------TCTTGTGTTCTGGTCCCCTTTTCTACCACAGAAAGAACCCAAGATTAGGAAAGG-------TGAAGTGTTATTGTTCTTG---TCTGTGCTCTGAGTATCCCCTGTTATGACAAAGTGAAGTTTCATGTGTCTTCA----------TATTGTTTTGAAGTCAAACCTCAATCATGATGCATGAATGTATTTGCATCAAGA-ATTAGTTGTTCAGTGTCCTGACTGGAATGGGAGCAACAGTGTTGGAGGAAAGCTCTGTGGTTGCCTCTGCAGCTTTTCTGCCTAGAGGTGACAAATACAGGCTGT-AAGACCATGAGGACAACTTGCCATTTGGCCTAAGT--------GACAGCTAAAAATACTTTGTTATAGTTTTGAGTGCAGA-GTGTTTTTCTCAGTGAAATACATCCTGAATTGTATTACAGAGCAGtatatttgtttcctagagctactgtaacaaagtaacatgaac------caggtggctgagaaccacagaaatgtaagcttctgcagttctggagccacagatgggaaataaaggt---------gtcactatgtagagcccttttcttctctttctagggtcttgttagc-ccctacagtctttggtgtatcttacattgcaactacatt----cagtttctgcctgtgtcattatgtgg-----acttt---------------tcttctcttataaaggcaccggtcaggttggactaggactcaccctagtgacctcatcttaatttgattacacctgtaaagaccctgtttccaaataaggccacattcatagacagctgttgggggcagggagtttaacacaCCCTTTTGATGAACAGATAATA--GAAA-----------------------AAAAATC a score=25917.000000 s hg15.chr7_random 697942 389 + 1057565 TGACATGGTAACAAGAACACCAAAATGGGAAAGAATAGAGTAGATTTCCAGTTCTGATTCTGTGTGCCACAAACATTTCTGAAGTAGAA-------------------------------CCTG---AGGTAGCT----------------------------------CAAAAAGGCACCTCAGCTGT-------------GGACTGGGCCGGAAATGGGTGTTTGGCTAGTAAAACGCATCATTTTACTTTACCAACATAGTACCAGACATTTAAGGCTAACAAATTCACTCTTGCTCAGAAGAGAAAAAGCCTACCAGATTTTTAGTCTTGATTTAGACTTTACCAAACATTTCTAAAGGATAGGAAAAGTCCATCTGAGGCTTACCTTCCGTTGCCAGGCACACACCTGGCCTCCTCAGTATCTGCTGCAGGTCTGGTTTACTTGTCTCTTGAGGTGGTCAGTGAG s mm3.chr6 111132672 283 - 149950539 TACCATAGTG--GAAGACACCAACATGGGA-------------------AGCTCTGCTTCTAAGTGTATCAGAT-TTTCTGGCTAAG---------------------------------CTTG---------------------------------------------AAAAAAACCAATTTAGTAGT-------------GAACTGAGCATGGAATAAG---------------------------------------------CAAACATTTGGGAATATCCAATTTTCTT-------------------CACACCAGCTTATGAGTCTCACTTTATAATTTATAAGGCATTTCTAAGGGATAGCATAA-TTCATGTGAGGCTGACTGACC-TTACCAGCCAACTACTCGGCCTCCTCAGTGACTGTTGTAAGTCTGGGTGGC--------TGAGGTGGTCTCTAAG s rn2.chr4 119745386 392 - 183307734 TACCATAGT---GAAGACACCAATATGGGAATGTGTAGACCACGTTTCCAGCTCTGTTTCTGAGTGTATCAGAT-TTCCTGGCTAAGAGggggttggggatttagctcagtggtagagcacttgcctagcaagcgcaaggccctgggtttggtccccagctccggaaaaaaaaaaaaagaTTTCCTGGCTAAGCTTTGGGGGGAACTGAGCAAGGAATAAG---------------------------------------------CAAACATTTGGGAATATCCAGTTTTCTT-------------------CACACCAGCTTATGAGTCTCAGTTTATTATTTATAAGACATTTCTAAGGGATAGCATAA-TTCATGTGAGGCTGACTGACT-TTACCAGCCAACTACTCGGCCTCCTCAGTGACTACTGTAAGTCTGGTTTGC--------TGAGGTGGTCACTAGG a score=70831.000000 s hg15.chr7_random 699239 720 + 1057565 ATTC------TCTTTTATACCAAAGTGACTACAGTTGCTCCTCAGTAGATTGAGAGATA-------CATTCCTATATGGCCTTTTTCAGAAGCGTTGTAACATCAACTCATGCAGAGCTTAATTTAAAGTAGATAGTATGCTTTTACTTGTTTCCAGCTATGATATTAGACTAATTGAAATGAACTTATAGGTCCTTTAAGGTAAGATATAGAGAAAGCACAAAGTGAAATGTCTTATCTCCAAGAAGGGAAAACCGAAGAGA---------CTTCTTTTGGAATATGGTAAT-------------TAT-TTAACCTGAGAAAATTATACTTTAGTAAAATGCTTTTGGTTTCCTTAAAACTATtgttatgggttgaattgtgtttcccccctgccaaattcatatcttaaattcctaaccttccatatctcagaatgtgactttatttgg--aggtagggactttataga------------------------------aggaatcaggt-------------taaagtgaggtcatcagggtgggccctaacccaatacaactgatgtccttattaaaagg-gaaatttggacacagatacacacagagggaagatgatgtgaagagacacacagagaagacagtcatcagtgagccaaggagggaggcctagaacagacccttcccttccagccctcagaaggaaccagccctgctgacaccttggtcttgg-actccagcttcttgaactgtgagacagcgtctgctgtttaggctgcc--cagtca------gtggtgctttggt------- s mm3.chr6 111133155 753 - 149950539 ACTT------GCCTTGATAACCAAGTCACTGCAGTGGTTTCTTCACATGCACAGAATA--------TAGCTCTCTATGGCCTCCCCCAGACACACAATGATA----CTC-TGCAGAACTCAGTTTAGTGTAAGCACTTTGCTCTTACTTGTTTCCATATGTG---------TGACTAATATACACTTACAGGTTATTTAAGGCAGGATTCAGGGAAAGCACAAAATGAAATATCTTACCTCAAAGGATAAAAAGCAAAGGCTGTATttttattttattttattttattttattttattttaAATGTTATGTCATCTTGACAACATTACATTTTAGTAAAGTGCTTCTGGCCTTCTTAAACTTATGCTTACTACAtgtattttgtg-----ccccccaagttcacatgtagaattcctgacccttaggacctcagaatatgaccttgtttagaaagagag---ctttacggagattactgacttactggttccc--tctgtcaaaaattagcccttcttggtgttcagaagtagcttccttagggtggaccat----cagtatgacagaggtccttatcaacgggagaaatctaaacacatgtatatacagggagga--------caggacaca-aggaaaaagatagctatgtaaaagccaattggggaggcttgaaagacctcattccctcccttctt-------ggaccaagcctgaccatgcattgattgtggtcctctggcctgtagaactgtgag-------atgctattttgtcatcagccagccaccagctgcagtgctttgttaaggAGG s rn2.chr4 119746318 746 - 183307734 ATTTACTGTTGCCTTGATACAGTGATGGGGGCAGTGGTTTCTTCACATGCACATACAGAGCTGTCTCAGTTCTGTGTGGCCACCTCTAGACATGCAGTGACA--AACTC-GGCAGAACTCAGTTTGGTGTAACCACTTTGCTCTTACTTGTTTCCATATATG---------TGACTGAAATATATTTGCAGGTTATTTAAGGCAGGATTCAGGGAAAGCACAAAATGTAACATCTTACCTCAAAGGATAAAAAGCAAAGGGTGTATttttattttattttatttta--------------------AATGTCACACTGACA-----ACATTTTAGTAAAGTGCTTTTGGCCTTCTTAAACTTACAGTTACTGtatggattttgtg------ttcctaagttcatatgtagatttcctgacccttagaacctcagaagatgaccttctttag--agagag---ctttgcagagattactgactgactggtgtcctttctgtcaaacaccagcc---cttggtgttcagaagtagctttcttagggtggaccataatccagtatgacaaatgtccttttcaaaggg-gaaatccgaatatacatacatacagggagga--------caggagacacaaggaaaagatagctaggtaaaagccaattggggaggcttggaatacctcattcccatccttctctaagaa-ggaccaattctgtccatgccttga-tgtgg-cttctggcctgtagaactgtgag-------ctgctattttgtcatca--cagcaaccagctgcagtgctttgttaaggagc a score=2078.000000 s hg15.chr7_random 699960 49 + 1057565 ccccaaccctg----gcagattcataTG-CTATGTT--TAGAAAGTGGTGTTTTGT s mm3.chr6 111134304 52 - 149950539 AAGGAGCTGTA----CCAGACGAATATGCCTATGTTAGCAGCCACTGGCTTTTTGT s rn2.chr4 119747057 55 - 183307734 aaggagctgtaTGTACCAGACGGATATGCCTGTGTTAGCAGCCACCAGC-ATCTAT a score=1625.000000 s hg15.chr7_random 700009 11 + 1057565 GTTT-TTCTAAA s mm3.chr6 111134486 12 - 149950539 GTTTGTTTTCAA s rn2.chr4 119747200 12 - 183307734 GTTTGTTTTCAA a score=125111.000000 s hg15.chr7_random 700345 1263 + 1057565 GCCAATGCCACTCTTGTTTCAAAAAGGATTCTTTGAATTGTTTTA-----------TTTTCTTTTCATTGATCCCATCAGTTTCCTGGAGAAAGAAGCTGAAAAAGCGTTTGTGTCTTATCAGTGTTTGCTTCAGCACTGGATTGGAT-------TGGGA-------------ATTTTCAG--------ATTGCTTAT-----------GAGCTCTTG-------------------ACACCATGTCCTGTAGATAA-ACAATTATGGGTTGTCTGTACTCACCC-------------------ACTGCAGGGCAAGGCTGGCTCACCCACAG-------------------TG-GTTGATGGCTTCATTCAAAGCAG-TATAGCAGAGTTACCAAAAGGAGTTA---------------TTTGGGGCCAAGTTAGCAGCTTGCAGAAAGAGAATTAAG-----TCTGAACA-----------TGTAACTCTGACAAATAATGAGTCAATAGGTAGATAGATGTGTGGAGAATTTGCAAATGTTAGGAAAAGGATGTTTTCTCAATCAAAGAAACAC-------AGCCTATGGTAGCATTTGCAGATTC-------AAGGCAGATGACATAAAAGATTTTGAACGTTCTTAAGAGAACCACATTTCTTGGAAGAGCAGGAGGCGTGACATGGTGCATTTGGTTCTCTTCCCAGGAGAGCACCCTTCTTTCCCTGCTCCTGACCCTGTGGGAAAAGAGGGCTATTGGCTCATTCCCAGCCAGGCTCTGCCACTCTTTCTCTGTTTTCATTCTCCTGGATCAATCCCTTAATTGTGTTTATCATCATTTCATCCTTGATGTTTCCCTGTGACTCATATTGTCCTCCTCATACTATTTGACAATGTCTCTG---CCCCCGAGGATTACTTGATTTGCCATCTGCTCTACTTTCTACAGCATTTCTCCTGGGAAACAGCTTTACCCACGGGGACTCCATTTCCACCGAGGTGTTGATGACAGCCTTCAGGTCCACATCTCCACCCATGACCTTGCGCCCATTCCCTAACCTGGCTTTTTTCTTGTTGCATATAGAACATTTCCTCTTTGTTGTTACTAATGCCTAAAACAAAATCTGCCCCAAACCAAGCCCTTCTAGCTGGCCTGTGCTCTTACCGTCAGCAGCACCATTCTCTTAGTCCCTTTGGGGCATGAACCTTTGATT-TAG-ATCTTTTTCCCATTTGCTATTTCTCATTCTGGCCTTCTGGTCTTTTGGCTGTGTCCCTCTGTCTTTGGCCTTACCCATGAACTAGTTCAGGGTCACCTTGCTCTCTTCCCCTTCCAGTTAATCCCATGCAGGCCCAGCCCATCCTATTGATTTCCATTCCCTTTTCAAAGTGGGTGATCGTCATTCACAATTCAACCT s mm3.chr6 111134507 1267 - 149950539 ATCATTGCAACTCTAGTTTGAAAGGGGGTT-TTGGAGTTGTTTTT-CACAAACTTGTTTTCCTTTTCTTGTTGCTGCATATTTATTG----CAGAGACTGGGAAA---CGTGTATCTTCTCAGTAGTCAT-------CCAGATTGGTCGTACTTCTGGGAATGTATCATTACTATTTTCAGTGTT----CTTACACAT-----GGTAGGAAAGTGCTG-TCCCTCTGCTACCTTCCCAGGCCTTGCCAAGTTGAGAGCACTCAGACTGCTTGTGAACACTAACAT------------GTTTTAGACAGCAGGTC--------CTCATCCACTG-------------------CGCGACATTGGGTGTATGCATGGTCAGTATAGGGGAGTCACAAAAAGTCACTAAAGAGAAGCTTGGGGTTGAGGGTAAGGTTAACAACTTTCAGAAAAAGATGAGAAGAGAGTCTGAACACCAAGAAGGGCTGATTTTTTGACAAATAGTGAACCAGTAAGTTGGTAAATGTCTGAGGAATTTTCAAATAGCAGGAGGAAAATGTTTTCTGAATT----AAACAC-------AAGTTATGGTAAAATTTAAAGAAGCATAGCCTATGGCAGATAATACAAAAGGCTTGGAAAGTTCTTAAGAGAATTACATTTCTTGGAAAAGCAAAGGGCATG-TGTGGTGTGTCTGCTTCTTGTCCCTGGAAGGAACTCCTCCTT-TCTCCTCCGACCTCTGGGAGAAAGGAGGGCTGCTGACACATTCCC-GCCAGGCCCAGCCACTCCT--CCTGTTTCCATTCTCCTGGACCAATCCCCTAACTGTGGTTTT--TCACTTCATTCTTGGC-TTTCCCCATGACTCATG-AGTCCTCCTCATAGTCTTTGACATCCTCTCTGTACCCTCCAAGGATGACTGTATATGGCGTCTGTTAGACTTCCAGGATTGCTTCTCCTGGGAAACAGTGTTACTCACATAAATTCCATTTTTATCAAGAT-------------TTAAG-----CATCTGCAGCTGCAACATCTTGTCCATTCTTCCACCTGATTTTTTCCTTGTTGT-----------TGTCTTGTTG---------ACACCTAGCA-----------------GGAGCCTTTTCTG---------GTTCTCACAATCAGTAGTAACTCTC-AAGAGTCTC---AGCACAGAAGCCTTTCTTTGTAGTATCTATTCCTTAGATATCTGTCCACAGTCTGTCTTTC-AGTATATTGGACCTTTCCCATTGCCTTTGG-TTTATCCATGCATAAGTTTAGGCC-ACCTTGCCACCTTCTCCTTTTGGCTAATCCTCCGCAGGCTTAGCCCATCATATTGGGTTCCGTTCTCCTTTCAAAATGGTTTATCTTCATTCAAGAGTCAACCT s rn2.chr4 119747358 1272 - 183307734 agccccGCAACTCTAGTTTTAAAAGGGGTT-TTGGAGTTGTTTCTGCACAAACTTGTTTTCCTTCTCTTGTTGGTGCATATTTA---------GAGACTGGGAAA---CGTGTATCTTATCAGTAGTCAT-------GCAGATTGGGTGTACTGCTGGGAATGTATCATTACTATTGTCAGTGTTGGGCATGGCACCCAGTTAGGTAGGAGACCCATGCTCTCTCTGCTACCTTCCCAGGCCTTGCCAAGTTGAGAG-ACTCAGACTGCTTGTGAACACCAACGTTTAGACATAATCATTTTAGACTGCAGGTA--------CTCATCCACTGATTGGAAGTGCCGGCTTAGCACAACATTGGTTTTATTCAGGGTAA---TAGGGGAGTCACAAAAAGTCACTAGAG----GCTTAGAGTTGTGGGTAGGGTTAACAACTTTTAGAAAGAGAAAGGAAGAG--TCTGAACA---AGAAGGGCTGGTTTTT-GACAAATAGTGAATGAGTAAGTTGGTAAATGTCTGAGGAATTTTCAAATAGCGGGGAGAAGATATTTTCTGAATT----AAATATCATTCTGAACTTATGATAAAATTTAAAGAATCATAGCCTATGGCAGATAATACAGAAGGCTTTGAAAGTTCTTAAGAGAATTACATTTCTTGGAAAAGCAAGGGGCACA-TGTGGTGTGT--GCTTCTCTTCCCTGGAGGGAACTCCTCCTT-TCTCCTCTGACCTCTGAGAGAGAGGAGGGCTGTTGACACATTCCCTGCGAGGCCCAGCCACTCCT--CCTGTTTCTGTCCT--------------------GTGTTTTT--TCACTTCATTCTTGGC-CTTCCCCATGACTCATG-AGTCCTCCGCATGCTATTTGACATACTGTCTGTACCCTCCAAGG--------------CGTCTGTTATGCTTTCAGCATTGCTTTTCCTGGGAAACACCGTTATTC-TGTGAATTCCATTTTCATCAAGAT-------------TTCAA-----CACCTACATTCATAACGTCTTGTCCATTCTTCTGCCCCACTTTCTCCTTGATGTAT----AGCA-TAGCCTGTTGCTGTAGCTGACACCCCGCA-----------------GGAGCCTTTTCTG---------GTTCTCACAGTCAGCAGTAACAC----AGAGTCTC---AGCACAGGAGCCTTTCTTTGCAGTGTCTGTTCTCTAGATATCTCTTCACATTCTGTCTTTC-AGTAT-TTTGACCTATTCCATTGTCTTTGG-TTTATCCATGAATAAGTTTAGGGTGACCTTGCCAACTTCTCCTTTTGGTTAATCCTGTGCAGGCTTAGCC-ATCCTATTGATTTTCATTCTCTTTTCAAAATGGTTTATCTTCATTCAAGAGTCAACCT a score=55161.000000 s hg15.chr7_random 701608 508 + 1057565 AGCAAGT--------AGGAACTGGGTGCTGGTTAGGAAAGACCATTAGCTCCTGAC----ACTTCAG-TAAATTAAGCAATTTCTTGCCTCAGAGTTTCAGTATGAATAGCTGAACACTGGACATTTCAACGTAGATATCCCGTTAGTGCTCATAATTCAACATGTTGAAAACAGATTCTATTCTCCCCTCCCCCAA-----CACTTCAACTCCACTTC---CCATCTTCCTTCTC-ACT-CGTGGAGCCCCACTCCTTCTGGCACCCCAAATGTGTTCTAGTCCCCTCTTTC-------CTTTGCTCTCACATCTCATCTGTCAGCATGTCTCACCTTTTCTCCTCTGCAGAGTTTTATATTTCTGC---TGCTTCCTGTTTTCTCAGGCAGTTCCTTAGTCCGGGTCCCCCTTACC---CCTCTGGAC--------CAGCTTTCCCATTGGCTGAGCACTTGCCCAAGCTCCCTTAGCCCGGCTCTTCTTACTCAAGGCCACTTCTCTG--CACTGACCCCCTATGCATC-AGATAAGCAGTGGTTACCTCTT s mm3.chr6 111136067 525 - 149950539 AGCAACTTTGCACAGAGGTACCAGATGCTGCCTGTCAAACACCAGCAGCTCCTGATGCTAACTTCAGTTAAATTAACCAAGTTCTTGTTTCCATGTTTTAGTGGAAGTTAATG---CCGGGATACTTGAGCATAGATATCC----AGTGCTTGTTATTTAACTTGTTGGAAA-----------CTCTTCTTCCCAAGAAAAAAAGTTTGGCAGCGTGTTCCATCATCCCCTCTGTT-ACCACCTGCAGACCTACTTCTCAT---CCCTCAGACACACTTGATTCCTTTCCTTTCTTCTCCCTCTGCTTTGA-----AACCTGTCAG--TAACTTGCTGGTTTTTCTCTCTGAAGCCATATATTTTTCCCCTTTCTTTCTGTTTTCTCAGACAGTTCCTTGGTTCAGATCCCCCTCCCCTGCCCTCTGGGCTATTGTGACAACCTTCCTGTTTGCCATGCAACCTCTCCAGGCCACTTAGTCTAAGGCTTCTTACTCAAGACCAGTGTTCTGGCCACTGGTCCATTGCATATT-GAAAAAGGGACAATTGCTTCTT s rn2.chr4 119748873 525 - 183307734 --CAACTTTGCATAGAGGTGCCAGATGCTGCCTGTCAAACACCAGTACCTCCTGATGCTAACTTCAGTTAAATCAAGCAATTTCTTGTTTTCATGTTTTAATAGAAGTTAATG---CCTGGGTACTTGAGC-TAACTATTT----AGTGCTTGTTATTTAACTTGTTGGAAACTTGTTCTTTCCTCTTCTCTTCAAG-ATAAAAGTGTGTTAGCATATT---TCATCTCCCCTGTTAACCACCTGCGGACCCACTTTTCAT---CCCTCAAACACACTTGATTCCTTTCTATCCT-----CTATGCTCTGA-----AACTGGTCAG--TATTTTACTGTTTTTTCTCTGTGAACCCCTATATTTTCCCCCTTTCTTTCTGTTTTCTCAGACAGTTCCTTGGTTCAGATCCTCCTCCCTCA-CCTCTGGGCTATTGTGACAACCTTCCTGTTTGCCATGCAACCTCTCCAGGTTACTTACTCTAAGTCTTCCTACTCAAGACCAGTGCTCTGGCCACTGTTTCACTGCACATTAAAAAAAGAGATAATTGCCtctt a score=93326.000000 s hg15.chr7_random 702116 1046 + 1057565 TAAATAGGTAAATGTATTTTATTTTAATCATTTCTTATGGTTATATTTCTCAGATGTCA---TAACCAGAAGACACAGAAATGAGAGATGACTCAGGGTCATTGTTGTTGACATCCACTATTTTATCAGGTGACGTATAGTCAGGTGCGTCCTGTAGTTTCAGTCTGTCTTCCTTCACTTATCAGCCCTCATTTTTCCTTTGGCTGGTGTGGGACTCATCTCGTTGTTTGGTGATTGTAGTCTGAGAACCTAAAGAATgaa---gaagtttggctggtggcatggatttgggagtcaggcagacctcagttcaaatcccagccctgctagcagaggcgaagtgactttggacaaattatagctccatttactcatctctaaaaca-------------------gggaaacactgtAGTTT-------TGTTGTATCGAGCAAACACCTGGAGTCTGACATATAGAGAGCAAAGGCAATCAGGACAGTCACCTACCACTTGTTG------ATGTGTTAGATGGCAGCCAGTGAGAGAGAAGGCGAAAGGAGAAATT--AGATGAGCAGCTCTCATGGTTGGGCTTCCCCCCAGCTCTCTGAGTATTTAGAAATTACTTCTAGAAGATAGAAGTTATCAGAAGATGACAATTCTGGATAACTAGGTAGTTGTATACACAGTGCATACTGGTGGTTATTTATTGCTTTAGCATTTGTTATTGTATTGCCACTATGCAAACGCACCTCAGTTGTCTCCAAGCAAAGCCTGAGC-TTTCTAGTACAGAGACCGCAGTGCTGGCCGCTCCCGCCATGAGTCTCACTCTCCTGATGGACTGAAG---TACACTCTGTTTGCAGGAT-TTGGAGCACTAG-----CCTTCTG-------CCCCATCTTTCTAATTGCAGCTTGAGTCTTAGTTCTGCTGTGAAACTTTGCCTGACCACAAT--GCATAGTGAC--TCCTGCCTCTAAACTTCTAGTGTTTACTTTGGCAAGTTGTTTATGTTGCCTTAGAATTACCAGCTGTCCTTTTTAATTTGCATTGTACTTGGCAATCCCCATGAGATTC-TAAGCTCCTTTAGGTCGGTGACGATGTCTT s mm3.chr6 111136592 947 - 149950539 AGAAGAAACATATTTAGTTT-TAAAAATAACTTTAAA-----ACATTTCTCAAACGTCATCCTGACCAGAGGAGACACAAATGTTAAACA--CCATGGTCATCGTTGTGGGTATTCGTTAT------GGTTGATG--CAGTCAGCTCTGTCCTGTAGTCTAGATCTGT-TTCCTCTTCTTTTTGGCTTTCATCTGACCATGGGTGCTACTCTGCCTGGCCTCA-TGTTCGATTCTTCTAATTCAAGAACCAAACAAGTGAAGCAGAAGCTTGAGTAATGAcatgagtttgagatctaggcagacctcagttccaaattcaaccctgctagta---gcagagtgactttaggtgacttccg---tcatttccct-------aagcA-------------------TAGGAGAAATGCACCTTACCTCACAGTCCTGA----TAAGCACCTGGAGTCCA----GAAAAGAGCAGGAGTGACCATGAAAGTCTCAGA-AACTTGATTAATTACATGTG-----TGGTAACC-----GAGTAAGAGCCACAGGCTGGGTCAGGGGCGAGC--------TGGCT---CCTCACAGCAGCTTTGT--GTGTTTAGAAG-TGTTTTTAGACTATTAGAGCCACCAGAAT-------------CTAAGGAGGCAGTTG-ATATGCAGTGTCCACTGGAGGTTGATTATTGCCTTTGCGTTTGTTAATATATTACTGATATGCAAATGTGCTTCAGTTGTTTCCAAGCAGAGCAGAAGCTTTCTGAGGACAGAGACAATGGTGCTGGTTGCTCT----------------CTACTGCGAGACTGAGGAATTACACCCTCCTAGTAGGATCCTGGAACACCAGCCTAACCTTCCGAAAGGTCATCCATCTTTATAATCACAGTTCACATCT---------TATCAAATCTTGCCTGGCTATAAC---CTGAGTGAG--TTCT-TCTCTGAACTG-TGCTGTTTACTTCGG----------------------------CAGTTGTCCTTTTAAATTGGCATTGGACTTTATGCTA----TGAGACTTTTAAGCTCCTTTAGGTCAATGGTGATGCCTT s rn2.chr4 119749506 961 - 183307734 AAAAGAGACatttatatttt---aaaataattttaaa-----GCATTTCTCAAATGTCATCCTGACCAGAGGAGACACAAATGATAAACA--CCATGGTCGTTGTTATGGGTATCCATTAT------GGTTGATG--TAGTCAGCTCTGCCTTGTAGTTTAGATCTGT-TTTCTCTTCTTTTTGGCTTTCATCTGTCTGT---CTTTACTCTGCCTGGCCTCA-TGTCTGATTCTTTTAATTCAAGAAGCAAACAAGTGAAGCGGAAGCTtgagtaatgacatgaattt--ggtctaggcagaccttaattccaaattcaaccctgctagta---gtaaagtgactttgggcaacttatg---ccatttccct-------aagcacatttccccatttgttcactaggagaaatgcaccttaccagacagttctgaggagtaaGCACCTGGAGTGCA----GGAAAGAACAGGTGTGTCC-TGAAAGTCTCAGA-AACTTGATT-GTTACATGTG-----TGGTAGC-------AGTGACAGCCAGAGGATGGGTC-GGGGCGAGC--------TGGCT---CTTCCCGGCAGCCTTG---GTGTTTAGAAG-TGTTTCTAAACTATTAGCGCCCCCAGAAT------------GGTAAGGAGGCAGCTG-GTATGCAGTGTCCGCTGCAGGCTGATTATTGCCTTGGCATTTGTTAATATATTACTGAGATGCAAATGTGCCTCAGCTGTTTGCAAGCAGAGCAGAAGC-TTCTGAGGACAGAGAC-ACAGTGCAGGTTGCTCC----------------CCACTGTAAGACTGATGAATTATATCCTCTTAGTAGGAT-CTGGAACTCCAGCTTCACCTTTTGAAAGGTCATCCATCTTT-TAATCACAGCTCGCATCT---------TGTCAAATCTTGCCTGACTGTAACACACTGAGTGGACCTACT-ACACTGTCCTG-TGCTGCTTACCTTGG----------------------------TAGTTGTTC-TTTAAACTGGCATAGGACTCGATGGTGCAC-TGAGATTCTTAAGCTCCTTTAGGTCAATGGTGAGGtctt a score=3125.000000 s hg15.chr7_random 703162 38 + 1057565 AGATG-TCTTTGTGTTTCCTGTTGTGCTCAACCCTAATC s mm3.chr6 111137679 37 - 149950539 AGACA-TTTTTGTATTTTCC-TTCTACCCCATGCCAGTC s rn2.chr4 119750590 38 - 183307734 ATGTGTTTTTTGTAATTTCT-TTCTACCCCATGCCAGTG a score=8673.000000 s hg15.chr7_random 703200 104 + 1057565 TTTTTTTATGTAGAGGAC--CCTTAATACAGACTTGATGATTGATTTTATTTCATGTTTTTTGTTTTTTTCAAATGCCCAGTGCTGCAATCAGTAGTATTGTTATt s mm3.chr6 111137716 88 - 149950539 -----TTATAAAGAGAAGACCTGTAATGCAGACCAGATGATTGACTTAGTTTA------------TTTTCCAGATGCTCAGCGCTGCTG-CAATCGTATTGCTGCT s rn2.chr4 119750865 90 - 183307734 -----TTATATAGAGAAG--CAGTGACACAGTCT-GATGACTGGTTTAGTTTAG-------TTTATTTTCCCAGTGCTCAGTGCTGCTA-CAGTCATGTTGCTGCT a score=63168.000000 s hg15.chr7_random 703747 387 + 1057565 aagaattctgtagagcttgtggttgaTCCTAAGCTGTGCTCTGGTGGAAT-ATACTATATATTTAACATTGCACAACTAGTGGGTAAACAGACATTGATTGAAAATGGTATAAAAGCCCC-AGGGACATTCAGTATACACTGTTTTGGAAATGTATCATTTAGAATGGGCTAACCTGAAATTATCTGTGTACTCCTTGTGAAATATAAACTTAATAAGCAGGATTATTAAAAC-TTTATGAATATTATTTAGTATGTCAATGAAGGAAACTTTC-CAAGTACTTTTTGACCCCCTGAGGTATTAGATCACCGTGTCATCCAGGGTTCTCAGGGGTTATACAGATTAACCCTT-TCTAGGTGTTT-AAAAATGTCCATTTAGATGCATATTTCC s mm3.chr6 111137816 378 - 149950539 AAGGATTCTGAAGAACTTGTGGTTAATTTTACAC--TGCTCAAGTGGAGTCATATCATGTATCTAACATTATACAACTAGTGCATAAACACTCTCTGATTGAAAATGATATAAAAGCCCCAAAAGATATTTAGTACTCACTGTTTTGAAAATCTGTCACTTAGAAACAGGTAACCTGAAATTGCTT-CACACTCTTT-TAAAATACAAACCTGACACACAGGATAATTATTACAGTTATGAATATTCTGTAGTATATCAATGAAG--AATTTTTTCTAATACTCTTCAATCCTCTGAGGCATTAAATAATCA-------CAAGTTTATCAAGGGCTATACAAATTTTCCCTTATCTAGGTGTTT-AAAAATTTCCATTT-GATACATAATTCC s rn2.chr4 119750967 378 - 183307734 CAGGATTCTGAAGAGCTTGTAGCTAACTTTATAC--TGCTCTGGTGGAGTTATATCATGTATTTAACATT-TACAACTAGTACATAAACACTCTCTGATTGAAAGTGATATAAAAGTCCCAAAAGATATTTAGTACACACTGTTTTGAAAATCTGTCACTTAGAAACAGGCAACCTGAAATTGCCT-CACACTCTTT-TAAAACACAAATTTGACACACAGAATAATTATTACAGTTATGAATAGTCTGTAGTATATCAATGAAG--AATTTTT-CTAATACTCTTCAATCCTCTGAGGCATTAAATAATCA-------CAAGTTTATCAAGGGCTATATAAATTTATCCTTCTCTAGGTATTTTAAAAATTTCCATTTAGATACATATTTCC a score=91592.000000 s hg15.chr7_random 704134 635 + 1057565 AACATTCATATATTTTTGACA-TATTCTAT---AATTT-TGTTATGTCTTATGTGCATAAT---CTATATTAGATATGGCATTTCATTAAATATGAGAATTAATCCTTCCTTTGAGTTCTTTATTATGAAAAAAAAAAAAAAAGATCTGTAGCATCTATTAAGTACTCATTATTCAGCCAGAGCTTGTGTCCAGAAGATTTTAGGAAGTAAGGAAGTTAGTACCTCTTAAAATCAGGTGTTCATGATTCCATTCTCTTGAATAATATAACTGGATTCTGAGCGGTAATCTGTTTTACATCTGCCAAACCCAAATTAAATATTACATACCGATAAAAT-TGGTGCCACTATTTTAGAGATCACCTCCCTGGGAATCAGGGCTTGAGCTTTGCTAGAATTCAGTGAAATTGAATTCAAT---------TTATTTTTTTTTATTGTAGTTGAACCCTCACTCATCCTTGT-----------AGTCTGATCTTCCAGTAGATAATTTATTTAGGGGTGGTGAAATGGAAAGGAAATGTTACTCAGATATGAAGCAACTTTTCAGTTCATCTAATTGTGAAATATAAAGTTATGAAGAAACTAAGTAAATAGTGGGGGGAAAATATGCTAAATGAGCCAGTCCCTTAACAAATGTCATTTTTTAAAAAA- s mm3.chr6 111138330 612 - 149950539 CATAGACATATATTTCTAACATTGATTTAT---AACTT-----ATATCTTATGTGCAAAATATGATATAGAAGACAGGATATTCTATTAAGTATGGGAATGAA----TTATTTTTATTATGTATTATAGGGAAACAAAATAACATT--GTAACTTTCATCAGATACTCATTATTCAGGC--AGTATATGCCTGGAAGGTTTTAGAAAGTGAAGAGGTTAGTACCTCT-----CGTGGGGATCTGGACTCTATGCTCTTTAACTATGTAACTGGATTTTGAGTGGCAATCTATTTCATATCTGCCAAGCCTAAATTAAACCTTAAATACTGATAAAAAATGATGC--CTATTTTTACTTATAATTCCTT---------CTCTTGAGCTTTGCT-GAGTTCAATGAAACTGAGTTCAATGAAAAAAA-TTAATCATATAT----------AACCCTCACTTATCCCTGTAGTTTCACCAGAGTCTGATCTTCCAGTAGATAATTT-----GGG-TGGTGAAATGGAAAGGAAATG-TACTCACATGTGAAGCAACTTTT-AGTTCATCCAATTGTGAAATAAAAAGTTATGAAGAAACTAAGCAAATATGTTAGGAAAAATACACTAAGTAAGCCAGTCTTTTAACAAATGTCATTTTTAAATATA- s rn2.chr4 119751492 617 - 183307734 CGTAGACATAT--TTTTAACATTGATTTATTTTAACTTGTTTTATATCTTATGTGAAAAATGTGATATAGACAACGGGGTATATTGTTAAGTATGGGAATGAA----TTCTTTGAGTTATGTATTATGGGGAAACAAAATAACATT---TAACTTCCATCAGATACCTGTCATTCAGGC--AGTATATGCCTAGAAGGTTTTAGGAAATGAGGAGATTGGTACCTCT------GTGCGGATCTGGACTCTACTCTCTTTAACTATATAACCAGATTTTGAGTGGCAATCTATTTCATATCTGCCAAGCTTAAATTAAACTTTAAATACTGATAAATA-TGATGC--CTATTTTTACTTATAATTCCTT---------CTCTTGAGCTTTGCT-GAATTCAATGAAATCGAGTTCAATGAAAAAAAATTAATCATATGT----------AACTCTCACTTATCCCTGTAGTTTCACCAGAGTCTGATCTTCCAGTAGATAATTT-----GGGGTGGTGAAATGGAAAGGAAATG-TACTCATATGTGAAGCAACTTTTTAGTTCATCCAATTGTGAAATAAAAAGTTATGAA--AACTAAGCAAATATATTAGGAAAAATACACTAAATGACCCAATCTTTTAACAAATGTCATGTTTAAAAAATA a score=7791.000000 s hg15.chr7_random 705102 54 + 1057565 GTGAGTTAAGACTTCAAGAAATCATGAAGATTTTTAGATATTC---TTATTATTACA s mm3.chr6 111138942 55 - 149950539 GTAGGTTAAAAACTCAAG--ATCATGAAAACTTTTAGCTTTTTAGGTGAGTATGACA s rn2.chr4 119752109 55 - 183307734 GTAGGTTAAAAACTCGAG--ATCATGAAGACTTTTAGCTTTGTAGGTGAGTATGACG a score=7175.000000 s hg15.chr7_random 705156 75 + 1057565 TTATTTGTAGCCCCAGACCAATGAATTTCTCATTAAACCATTAAGACAAAGAGAAACCAAAAGGTGCATAGAATT s mm3.chr6 111139106 69 - 149950539 TTGCCTACAACTCTGAAA----GGGTTTCTCATTAAACCTTCAAGACTAAGAAAGACAACGAGCCACAGAGTT-- s rn2.chr4 119752252 71 - 183307734 TTGTCTATAACTCTTGAA----GAGTTTCTCATCGAACCTTGAAAACTAAGAAAGACAATTAACCACATAGACTT a score=14382.000000 s hg15.chr7_random 705412 156 + 1057565 ATCTAGGTTTGAACTTCTGGGGTCAGGGTCTGATTTTTTTCACTTATCACAGAAGCTTAAACCCATCACATGACTTCCCAGTTTTCAAAGTAGGACCTTTGTGAGAAT--GAAAGTAGGGAGGGTGCTCTGAATAATTGAATTGGCCTAACAGGGTAA s mm3.chr6 111139175 145 - 149950539 GTCCAGGCTTGAGCTTC--AAATCAGGGTCTGATTTTGCC--CCTATTCCAGGAGCCCACA-CCATGACCTGATGTCACAGCTTTCAAC-TCATCCCTGTGTGAGGAG---ATTGTGTGGGGCATGTGT----TAATGGGATGAGCATACCACGATAA s rn2.chr4 119752323 148 - 183307734 ACCCAGGGTTGAGCTTC--AGATAAGGATCTGATTTTGCT--CCTATTCCAGGAGCCCACA-CCATGGTCTGACGTCATGGCCTCCATC-TCATCCCTGTGTGAGGAGGAGAGTGTGGGGAGCATGTGT----TAATGGGATGACCAGACCACTACAA a score=372.000000 s hg15.chr7_random 755576 20 + 1057565 CTCAGTCCTCATCCCTTCTA s mm3.chr1 37814872 20 + 195869683 CCCGCTCTCCATGGCCCCTG a score=20916.000000 s hg15.chr7_random 755598 243 + 1057565 CCTCAT-TGCCCTCAGTCCTCATTGATCTCAGTTCTCATTGCCCTCAGTCCTCATTGCCCTCAGTCCTCATTGATCTCAGTCCTCATTGCCCTCGGTCCTCATTGCCCTCGGTCCTCATTCCCC-------TCGGTCCTCATTGATCTCAGTCCTCATTGCTTTCAGTCCTCACTGCTTT----------CAGTCCTCATTCCCCTCAGTCCTCATTGCTTTCAGTCCTCATTCCCCTCAGTCGTCATTGCCCGCAGTCCT s mm3.chr16 33612872 253 - 98986639 CCTCCC-TGCCCACAGCTTCCCATGCCCACAGCTTCCCGTGCTCACAACTTCCTGTGCCCACAGGCTCCCGTGCCCACAGCTTCCCATGCCCACAGGCTCCCGTGCCCACAGCTTCCCATGCCCACAGGCTCCCGTGCCCACAGCTTCCCATGCCCACAGCTTCCCAGGCTCACAGCTTCCCACGGATTGCCGTGCCCACGGTCTCCCGTGTCCACAGCCTCCCTTGCCC-ACAGCTTC------CCGTGCTCACAGCTTC s rn2.chr11 86232692 247 + 88445885 CTTCCAGTGCCCACAGCTTCCAGTGCCCACAGCTTCCGGTGCCCACAGCTTCCAGTACCCATAGCCTCCCGTGCCCACAGCTTCCAGTGCCCACAGCTTCCAGTGCCCATAGCTTCCAGTGCCCATAGCTTCCAGTGCCCACAGCTTCCAGTGCCCATAGCTTCCAGTGCCCATAGCTTC----------CAGTGCCCATAGCTTCCAGTGCCCATAGCCTCCCGTGCCCAATAGCCTCC----TCCATGCCCACAGCTTC a score=3283.000000 s hg15.chr7_random 755841 177 + 1057565 CATTCCCCTCAGTCCTCATTCCCCTCAGTCCTCATTCCCCTCTGTCCTCATTGCCCTCAGTCCTCATTGATCGCAGTCCTCATTGATCGCAGTCCTCATTCCGCTCAGTCCTCATTGCCCTCAGTCCTCACTCCCCTCAGTCCTCATTGCCCTCAGTTCTCATTGCCCTCAGTCCTC s mm3.chr16 33613125 177 - 98986639 CTGTGCCCACAGCCTCCCGTGCTCACAGCTTCCTGTGCCCACAGCCTCCCGTGCCCACAGCCTCCCTTGCTCACGGTTTCCCGTGCCCACAGCCTCCCGTGCCCACAGCTTCCCGTGCCCACAGCTTCCCATCCCCACACCTTCCCGTGCCCACAGCCTCCCTTGCTCACGGTTTCC a score=5047.000000 s hg15.chr7_random 756018 72 + 1057565 ATTCCCCTCAGTCCTCATTGATCTCAATCCTCATTGCTTTCAGTCCTCATTAACCTCAGTCCTCATTGCGTT s mm3.chr16 33613302 63 - 98986639 CGTGCCCACAGCCTCCCGTG---------CCCACAGCTTCCCGTGCCCACAGCTTCCCATCCCCACACCTTC s rn2.chr11 86232681 63 + 88445885 CATACCCACAACTTCCAGTG---------CCCACAGCTTCCAGTGCCCACAGCTTCCGGTGCCCACAGCTTC a score=21675.000000 s hg15.chr7_random 756090 279 + 1057565 CAGTCCT------CATTCCCCTCAGTCCTCATTGCCCTCAGTCTTCATTCCCCTCAGTCCTCATTGCCCTCAGTCCTCATTGATCTCAGTCCTCATTGCCCTCAGTCCTCATTGATCTCAGTCCTCATTGCCCTCAGTCCTCATTGCCCTCAGACCTCATTCCCCTCAGTCCTCATTGCCCTCAGTCCTCATTGATCTCAG-TCCTCATTGATCTCAGTCCTCATTGATCTCAGTGCTCATTACCCTCAGTCCTC-ATTGATCT--CTTTGCTCATTACCGTCAGTCCT s mm3.chr16 33612853 272 - 98986639 CAGCTTC------CCGTGCCCACAGCCTCCC-TGCCCACAGCTTCCCATGCCCACAGCTTCCCGTGCTCACAACTTCCTGTGCCCACAGGCTCCCGTGCCCACAGCTTCCCATGCCCACAGGCTCCCGTGCCCACAGCTTCCCATGCCCACAGGCTCCCGTGCCCACAGCTTCCCATGCCCACAGCTTCCCAGGCTCACAGCTTCCCACGGATTGCCGTGCCCACGGTCTCCCGTGTCCACAGCCTCCCTTGCCC-ACAGCTTC--CCGTGCTCA-------CAGCTTC s rn2.chr11 86232667 272 + 88445885 CTGCTTCAGTAAAACATACCCACAACTTCCAGTGCCCACAGCTTCCAGTGCCCACAGCTTCCGGTGCCCACAGCTTCCAGTACCCATAGCCTCCCGTGCCCACAGCTTCCAGTGCCCACAGCTTCCAGTGCCCATAGCTTCCAGTGCCCATAGCTTCCAGTGCCCACAGCTTCCAGTGCCCATAGCTTCCAGTGCCCATAGCTTC----------CAGTGCCCATAGCTTCCAGTGCCCATAGCCTCCCGTGCCCAATAGCCTCCTCCATGCCCA-------CAGCTTC a score=2883.000000 s hg15.chr7_random 756369 161 + 1057565 CATTGATCTCAGTCCTCATTGCTCTCAGTCCTCATTGCCCTCAGTCCTCATTCCCCTCAGTCCTCATTGATCTCAGTCCTCATTCCCCTCAGTCCTCATTGATCTCAGTCCTCATTGCCCTCAG-TCCTCATTC---------------CCCTCAGTCCTCATTGATCTCAGTCCTC s mm3.chr16 33613125 177 - 98986639 CTGTGCCCACAGCCTCCCGTGCTCACAGCTTCCTGTGCCCACAGCCTCCCGTGCCCACAGCCTCCCTTGCTCACGGTTTCCCGTGCCCACAGCCTCCCGTGCCCACAGCTTCCCGTGCCCACAGCTTCCCATCCCCACACCTTCCCGTGCCCACAGCCTCCCTTGCTCACGGTTTCC a score=12356.000000 s hg15.chr7_random 756530 130 + 1057565 ATTGCCCTCAGTCCTCATTCCCCTCAGTCCTCATTGATCTCAGTCCTCATTCCCCTCAGTCCTCATTCCCCTCAGTCCTCATTGCTCTCAGTCCTCATTGCCCTCAGTCCTCATTCCCCTCAGTCC--------------TCAT s mm3.chr16 33613302 138 - 98986639 CGTGCCCACAGCCTCCCGTGCCCACAGCTTCCCGTGCCCACAGCTTCCCATCCCCACACCTTCCCGTGCCCACAGCCTCCCTTGCTCACGGTTTCCCGTGCCCACAGCCTCCCATGCCCACAGCTT------CCCACGGCTTCC s rn2.chr11 86232681 144 + 88445885 CATACCCACAACTTCCAGTGCCCACAGCTTCCAGTGCCCACAGCTTCCGGTGCCCACAGCTTCCAGTACCCATAGCCTCCCGTGCCCACAGCTTCCAGTGCCCACAGCTTCCAGTGCCCATAGCTTCCAGTGCCCATAGCTTCC a score=18514.000000 s hg15.chr7_random 756660 180 + 1057565 --TGCCCTCAGTCCTCATTGCCCTCAGTCCTCATTGCTCTCAGTCCTCATTGCCCTCAGTC-----------CTCATTGATCTCAGTGCTCATTACCGTCAGTCCTCATTGATCTCAATCCTCATTGCTCTCAGTCCTCATTGCCCTCAGTCCTCATTGATCTCAGTCCTCATTCCCCTCAATCCTCATTGCT s mm3.chr16 33613440 187 - 98986639 CATGCCCACAGCCTCCCGTGCCCACAGCTTCCCATGCCCATAGCTTCCCATGcccacagcttcccacagcttcccacggcttcTCGTGCCCACAGCCTCCCATGCCCACAGCTTCC------CACGGCTTCCCATGCCCACAGCCTCCCGTGCCCACAGCTTCCCATGCCCATAGCTTCCCATGcccacagct s rn2.chr11 86232681 189 + 88445885 CATACCCACAACTTCCAGTGCCCACAGCTTCCAGTGCCCACAGCTTCCGGTGCCCACAGCTTCCAGTA----CCCATAGCCTCCCGTGCCCACAGCTTCCAGTGCCCACAGCTTCCAGTGCCCATAGCTTCCAGTGCCCATAGCTTCCAGTGCCCACAGCTTCCAGTGCCCATAGCTTCCAGTGCCCATAGCT a score=5207.000000 s hg15.chr7_random 760168 39 + 1057565 TGGCAGAGGAGCTGAGGATGAGAGGAGGACAGGATGTCC s mm3.chr1 59965041 39 - 195869683 TGGCAGAGAGACAGGAGATGAGGAGAGGCCAGGGTGCTC s rn2.chr13 58780263 38 - 105800825 TGGCTAAGAGATAGGAAATGAGGAGAT-CCAGGGTGCTC a score=139.000000 s hg15.chr7_random 760964 10 + 1057565 ATGCGTCCCA s mm3.chr1 37814882 10 + 195869683 ATGGCCCCTG a score=1333.000000 s hg15.chr7_random 760982 40 + 1057565 --------------AGCCTGGCTCT------GCACGCCCACAGCCACCC-AGCCTTT--CTCC s mm3.chr16 33612849 42 - 98986639 --------------AGCACAGCTTC------CCGTGCCCACAGCCTCCC-TGCCCACAGCTTC s rn2.chr11 86232649 63 + 88445885 TCACCACCAGTAGGAATGCTGCTTCAGTAAAACATACCCACAACTTCCAGTGCCCACAGCTTC a score=2572.000000 s hg15.chr7_random 761022 19 + 1057565 CCAGGTGGTTCCAATCTTC s mm3.chr5 114196155 19 + 149719773 CCACATGAAGCCAACAGTC s rn2.chr12 5066306 19 - 46874691 CCACATGGAGCCAACAGTC a score=1491.000000 s hg15.chr7_random 761041 24 + 1057565 ATTCC---CCTCAGTCCTCATTACTCT s mm3.chr5 114196174 27 + 149719773 ATCCCTGATCTCTGTCACTCCTGCTCT s rn2.chr12 5067187 27 - 46874691 ATCCCTGATCACCATCATTCCCGatca a score=12265.000000 s hg15.chr7_random 761070 158 + 1057565 CTCACTGATCTCAGTCCTCATTGCTCTCAGTCCTCATTGATCTCAGTCCTCATTGATC----TCGGTCCTCATTCCCCTCGGTCCTCATTGCCCTTGGTCCTCACTGATCTCAGTCCTCATTGATCTCGGTCCTCATTGCCCTCAGTCCTCATTGATCTCGC s mm3.chr5 114196174 154 + 149719773 ATCCCTGATCTCTGTCACTCCTGCTCTATGTCATCCCTGGTCTCCATCATCCCCGCTCA--GTCAACCCtcatttccatcatccctcatcacc----atcatccctggtctccatcatccctgctca--gtcatccctcatcaccatcatccctggtctcca s rn2.chr12 5067187 158 - 46874691 ATCCCTGATCACCATCATTCCCGatcaccatcatccccaatcaccatcatccctgatcaccatcaaccctgatcacagtcatccctcatcacc----atcaaccacgatcaccatcatccccaatcaccatcatccctgatcaccatcatccctgatcactg a score=41465.000000 s hg15.chr7_random 761228 898 + 1057565 TCTTCGTTGCCCTCAGTCCTCATTGATCTCGGTCCTCATTCCCCTCAGTCCTCAT-TCCCCT-------------CAGTCCTCATTGCCCTCGGTCCTCATTAATCTCAGTCCTCATTGCCCTCAGTCGTCATTGATCTCAGTCCTCATTGCCCTCAGTCCTCATTCCCCTCAGTCCTCATTGCCCT-----CAGTCATCATTGATCTCAGTCCTCATTGATCTCAGTCCTCATTGATCTCAGTGCTCATTGCCCT-----CAGTCCTCATTGCTCTCAGTCCTCATTGCTCTCAGTCGTCATTGATCTCAGTCGTCATTGATCTCGGTCCTCATTCCCCTCAGTCCTCATTCCCCTCGGTCCTCATTCCCCTTGGTCCTCATTGCCCTCGGTCCTCAT----TGATCTCATTCCTCATTGATCT-----CAGTCCTCATTGATCTCAGTC----------CTCATTGATCTCGGTCCTCATTCCCCTCAGTCCTCATTGTCCTCAGTCCTCATTGATCTCAGTCCTCATTGCCATCAGTCCTCATTCCCCTCAGTCCTCATTGCCCTCAGTCCTCATTGAT-----CTCAGTCCTCAATCCCCTCAGTCCTCATTGATCTCAGTCCTCATTGCTCTCAGTCCTCATTGCCCTCAGTCCTCA---TTGATCTCAGTCCTCATTCCCCTCAGTCCTCATTGATCTCAGTCCTCATTGCCCTCAGTCCTCATTCCCCTCAGTCCTCATTGCCCT-----CAGTCCTCATTCCCCTCAGTCCTCATTGCCCTCAGTACTCATTGATCTCAGTCCTCA----------TTGATCTCAGTCCTTATTGATTTTAGTGCTCATTACCCTCATCCTCATTGATCTCAGTGCTCATTACCGTCAGTCCTCATTGATCTCAGTCCTCATTGCTCTCAGTCCTCATTGACCTCAGTCCTCATTGATCTCAGTCC--- s mm3.chr2 175585259 895 + 181423755 TCCCTGCTGTCCTCCATCTCTGCCGACCTCCATCCCTGCTGTCctcaatctctgcttgtcctccatctctgtcctccatctctgctgacctccatctctg----tctccatct---ctgtcctccatctctgttgtcctccatccctgctgtcctccatctctgt----ctccatccctgttgtcct-----ccatctctgccgtcctccatctctgtctgtctccatccctgttgtcctccatctctgccATCCT-----CCATCCCTGCCGTCCTCCATC----------TCTGCCGTCCTCCATCTCTGTTGTCCTCCATCTCTGTCTTCCATCTCTGCTGTCCTCCATCCCTGCCGTCCTCCATCTCTGCCGTCCTCCATCTCTGTTGTCCTCCATCTCTGTCTTCCATCTCTGCTGTCCT-----CCATCCCTGCTGTCctccatctctgtcttccatctctgtcttccatctctgctgtcctccatctctgttgtcctc---catctctgtcctccatctctgctgtcctctatccctgctgtcctccatct---ctgtcttccatctctgctgtc-----ttccatctctgctgtcctccatctctat---cttccatctctgCTGTCCTCCATCCCTGCTGTCctccatctctgtcttccatctctgtcttccatctctgctgtcct---------ccatctctgttgtcctccatctctgt---cctccatctctgctgtcct-----ccatctctgttgtcctccatct---ctgtcctccatccctgctgtcctccatctctgtcttccatctctgtcttccatctctgctgtcctccatctctgTTGTCCTCCATCTC--TGTCCTCCATCTCTGCTGTCCTCCATCTCTGTTGTCCTCCATCTCTGCTGTCCTCCATCTCTGTTGTCCTCCATCTCTGCTGTCCTCCATCCCTG s rn2.chr3 27169328 725 - 165924081 GCTCTGc---cctccatccctaccg-tctccatccctgctgccctccatccctgc-tgccctccatc--------ccatccctgctgccctccatccctgctgccctccatc-----------ccatccctgctgccctccatccctgctgccctccatc-----------ccatccctgctgccctccatcccatccctgctgccctccatc-----------ccatccctgctgccctccatccctgctgccctccatcccatccctgctgccctccatc---------------------ccatccctgctgccctccatc--------ccatccctgctgccctccatccctgctgccctccatccctgctgccctccatccctgctgccctcca--------ttccatccctgctgccctccatcccatccctgctgccctccatc---------------------ccatccctgctgccctccatc---------------------------ccatccctgctgccctccatccctgctgccctccatc-----------ccatccctgctgccctccatcccatccctgctgccctccatc-----------ccatccctgctgccctccatccctgctgccctccatccctg----------ctgccctccatccctgctgccctccat----cccatccctgctgccctccatc-----------ccatccctgctgccctccatcccatccctgctgccctccatc-----------ccatccctgctgccctccatccctg----------ctgccctccatc-----------ccatccctgctgccctccatc----------ccatcccTGCTGGTCTCCATC-----------CCATCCCTGCTGCCCTCCATC-----------CCAtccctgctggtctccatctctg a score=1174.000000 s hg15.chr7_random 762126 158 + 1057565 ---TCATTCCCCTCAGTCCTCATTCCCCTCAGTCCTCA----TTGCCCTCAGTCCTCATTGATCTCAGTCCTCATTGATCTCAGTCCTTATTGATTTTAGTGCTCATTACCCTCAGTCCTCATTGATCTCAGTGCTCATTACCGTCAGTCCTCATTGATCTCAAT s mm3.chr2 175586154 156 + 181423755 CTGTCctctatctctgtcctccatctctgctgtcctccatctctgtcttccatctctgctgtcctccatccctgctgtcctccatctctgtc--ttcca----tctctgtcttccatctctgctgtcctccatctctgttgtcctc---catctctgtcctccat a score=12493.000000 s hg15.chr7_random 762284 204 + 1057565 CCTCATTGCTCTCAGTCCTCATTGCCCTCAGTCCTCAGTGATCTCAGTCCTCATTCCCCTCAATCCTCATTGCTCTCAGTCCTCATTGATCTCAGTCCTCATTGCCCTCAGTCCTCATTGCCCTCAGTC----------CTCATTGATCTCAGTCCTCATTGCTCTCAGTCCTCATTACCCTCAGTCCTCATTGCCCTCAGTCCTCATTACTCT s mm3.chr2 175586310 205 + 181423755 ctctgctgtcctctatccctgCTGTCCTCCATCTCTGTC---TTCCATCTCTGCTGTCTTCCATCTCTGCTGTCCTCCATCTCTAT---CTTCCATCTCTGCTGTCCTCCATCCCTGCTGTCctccatctctgtcttccatctctgtcttccatctctgctgtcctccatctctgttgtcctccatct---ctgtcctccatccctgctgtcct s rn2.chr3 27169313 167 - 165924081 CCCTGCTGTGCACCAGCTCTGc---cctccatccctaccg-tctccatccctgctgccctccatccctgctgccctccatc-----------ccatccctgctgccctccatccctgctgccctccatc---------------------ccatccctgctgccctccatccctgctgccctccatc-----------ccatccctgctgccct a score=2151.000000 s hg15.chr7_random 762488 15 + 1057565 GAGTCCTCATTGCTC s mm3.chr6 145813727 15 + 149950539 cagctcccagtgctc s rn2.chr4 179920892 15 + 183307734 CAGCTCACAGTGTTC a score=468.000000 s hg15.chr7_random 762503 10 + 1057565 TGAATGTTCA s mm3.chr15 58606464 10 + 104111694 TGAGCCTTCA a score=1319.000000 s hg15.chr7_random 762520 10 + 1057565 CATGATTTCT s mm3.chr4 7133411 10 - 152921959 CTTGAGCTCT s rn2.chr5 8211474 10 - 191625135 CTTGAGCACT a score=3358.000000 s hg15.chr7_random 763111 41 + 1057565 AAGTGTGTCCTGGGCTCCCACCCTCTCCCTGCCTGTCC--TAT s mm3.chr11 66201444 41 + 122862689 AGGCATGTCCTGAGTTCATACCCTCTCCCTGCTAACCT--CAT s rn2.chr10 48220930 41 + 106208427 AGGCACGGACAGAGTTCAT--TCTCTCCCTGTTTCCTCTCCAT a score=8598.000000 s hg15.chr7_random 764642 97 + 1057565 AGAGGCAGGCGCAGAGGC-----------------ACGTGCAGGGAGGCCAGCGGCCAAGACAGAGGCGCATGCAGGGAGGCCAGCGGCCGGGACAGAGGCACGTATACCGCGG s mm3.chr1 59972719 108 - 195869683 AGAAGCAGCTGCAGAGGTGTGCCATCT------GGGGGTAGAGTGTGGTGAGTGCCTAGGAGGGAGGACTGAGGACCTGGGTCAATGGTTGGGAGGGAGGACTGGAGACATGGG s rn2.chr13 58789293 113 - 105800825 GGAAGAGGCTGCAAAGGT-TGCCATCTGGGGGGGGGGGTAGAGTGTGGTCAGTGGCTGGGAGGGAGGACTGGGGACCTGGGTCAGTGGCTAGGAAAGAGGACCGAGGACCAGGG a score=1267.000000 s hg15.chr7_random 764739 64 + 1057565 TCAGTGGCCGGGACAGAGGCACATGCAGGGGGGCCAGTGGCCAGGACAGAGACTCATTTACGGA s mm3.chr1 59972827 64 - 195869683 TCAGTGGCTGGGAGGGAGGACTGAGGACCTGGGTCAGTGGCTGAGAGGGAGGACTGGAGACATG a score=7697.000000 s hg15.chr7_random 764803 54 + 1057565 GGCCAGAGGCAGGCACAGAGGCGCGTGCAGGGAGGCCAGCGGCTGGGACAGAGG s mm3.chr1 59972891 54 - 195869683 GGTCAGTGGCTGGGAGGGAGGACTGAGGACCTGGGTTAGTGGCTGGAAGGGAGG s rn2.chr13 58789338 54 - 105800825 GGTCAGTGGCTGGGAGGGAGGACTGGGGACCTGGGTCAGTGGCTAGGAAAGAGG a score=4328.000000 s hg15.chr7_random 764857 107 + 1057565 CACATTTACGGAGGCCAGAGGCAGGCACA------GAGGCGTGTGCAGGGAGGCCAACAGCCACCACAGAGGCGCGTGCAGGAAGGCCAGCGGCCGGGACAGAGGCGCGTGTA s mm3.chr4 37876 107 - 152921959 CGGGTGTAGACAAAGCCGTGTCAGGCTCA------GAGGCGGGTGTAGACAAAGCCGTGTCAGGCTCAGAGGCAGGTGTAGACAAAGCCATGTCAGGCTCAGAGGCGGGTGTA s rn2.chr5 1817669 102 - 191625135 CAGGTGTAGACTGATTTGTATGGGGTTGACATTTGAAGGCAAGTGTGGACAAAGCCATGTCAGGCGTGAAGGGGTGTGTAGACGAAGCTATGTCAGGCTGAG----------- a score=7567.000000 s hg15.chr7_random 766580 43 + 1057565 CTTCTTTCCTCTGAGCCTGTGGCCACACACCTGGCACAGGCCT s mm3.chr8 69779911 43 + 128923138 CTTTTTCCCTCTGAGCCTGTAACTCTGCACCTGACCAAGGCCT s rn2.chr16 65282978 42 - 84226546 CTTTT-CCCTCTGGGCCTGTAATCCTGCACCTGACCAAGGCCT a score=5183.000000 s hg15.chr7_random 766623 48 + 1057565 GTGTCTGATCTGTTTGACTGGCTTGGCCCACTGTCCCGTGTGAGGCAC s mm3.chr1 37825574 48 + 195869683 GAGGATAATGGCACAGACAGACGTGGCCCTCTGTCCCATGTGAGGAAC s rn2.chr9 40167262 47 + 118059026 GAACATAATGACACAGACAGAGGTGGCCC-CTGTCCCATATTAGGAAC a score=8459.000000 s hg15.chr7_random 766694 46 + 1057565 CCACAGGACCCCAGGGATGGAAGAGGTTGCGGAGGTCTGTGTCCAG s mm3.chr15 34882838 46 - 104111694 CCATAGGTCTCCTGTGTTGGGGGTGGCGGGGGAGGTCTGTATCCGG s rn2.chr7 40582527 46 - 139049774 CCATAGGTCTCCTGTGTTGGGGGTGGCGGTGGAGGTCTGTATCCAG a score=9114.000000 s hg15.chr7_random 766788 54 + 1057565 ACTCACTGCCTTTCTTGGTGCCCACTCTGCCTAGGATGCTCTGGGAGTGTCACT s mm3.chr18 85175688 54 + 91041441 ACTCACTGCTTGTCTTAGTACCTACTCTTCCCAGGATGTTCCGGGAAGGCCTCT s rn2.chr18 76828166 54 - 82509072 ACTTACTGCTTGTCTCAGTACCTACCCTTCCCAAGACTATGTGGGAAGGCCTCT a score=2016.000000 s hg15.chr7_random 767201 42 + 1057565 GTGGCTGAGCACTCCTCTGCCGTATAGCGTGGGTCGGGTCCC s mm3.chr7 13118618 42 - 134401573 GTGGCTGAGTGTATTCCTACCCCACAGTGTGGGTCAGGACCC a score=6114.000000 s hg15.chr7_random 767417 527 + 1057565 CACATAAAAATCCACAAAACAGCAAAATAGGGGCCTGAGACCCACCCACTTTGACATGGTGAAAACCAAGAGCCTGCGAACCACCTGCTTTGACACAGTGAAAACCAAGAGCCTGAGACCCACCTGCTTTGACACAGTGAAAACCAAGA--GCCTGAGACCCACCTGCTGTGACACAGTGAAAACCAAGAGCCTGAGACCCACCTGCTGTGACACAGTGAAAACCAAGAGCCTGAGACCCACCTGCTGTGACACAGTGAAAACCAAGAGCCTGAGACCCACCTGCTGTGACACAGTGAAAACCAAGAGCCTGAGACCCACCTGCTGTGACACAGTGAAAACCAAGAGCCTGAGACCCACCTGCTGTGACACAGTGAAAACCAAGAGCCTGAGATCCACCTGCTGTGACACAGTGAAAACCAAGAGCCTGAGACCCACCTGCTGTGACACAGTGAAAACCAAGAGCCTGAGACCCACCTGCTGTGACACAGTGAAAACCAAGAGCCTGAGACCCACCTGCTGTGACGTGG s mm3.chr9 8902255 523 - 124467299 CACATGCAGACACACAAGTGACCCTGAT---GGTATGTCACTCACATGCTAATACATAGATAACCCTGACTGCATGTCACTCACATGCTAACACACAGATAACCCTGATGGCATGTCACTCACATGCT--AACACAGAAGTGACCCTGATGGCATGTCACTCACATGCTAACACACAGATAACCTTGAGTATATGTCACTCACATGCTACCACACAGATAACCCTGATGGCATGTCACTCACATGCTAACACACAAGTGACCCTGATGGCATGTCACTCACATGCTAACATACAAGTGACCCTGATGGCAAGTCACTTACATGCTAATACATAGATAACCCTGTCTGCATGTCACTCGAATGCTACCACACAGATAACCTTGAGTATATGTCACTCACATGCTACCACACAGATAACCCTGATGGCATGTCACTCACATGCTAACACACAAGTGACCCTGATGGCATGTCACTCACATGCTGACACACAGTG-ACCCTGATGGCATGTCACTCACATGCTAATACATAG a score=6423.000000 s hg15.chr7_random 768622 91 + 1057565 CAAGAAACACCAATG--GTCTGCGTGGCTGTGGTTTCCCCGGCTCCCTTGTGTGGCTGTGGGTCCCCAGCTCCCTTGCTCCGAGATGTCTCTG s mm3.chr8 123078441 84 + 128923138 CAGAAGACA-CAGTG--GTGTTCTGGCCTGTGGTTTCCAGGGCCCTCTTGTCTGAGTCTGGGATTCCAGCTCTTGTG------GATTTCTCTG s rn2.chr19 52686443 77 + 58130210 ---AAGGCA-CTGTGTGGTGTT-TGGCCTGTGCTTTGCAGGACCCTCT-----GGGTCTGTGACTCCGGCTCTTCTG------GATTTCTCTA a score=1921.000000 s hg15.chr7_random 771182 160 + 1057565 GGGCCAGGGCGGCTGCTGAGGC---CCCGGCCCGAGGAGGGGCGGTCACCCCGCAGTCGGATGCCGCCGCGCCCCACGCCGCAGGGCAGCGCGCCCCAAAGCTTCCCGCGCGGGGACTGAGTGGCGCCCTGGGCTAGTCCCCGCCCCTTCGCCCCC-GCCGCGC s mm3.chr15 86345003 159 + 104111694 GGAGCGGGGCGGCGGCTTGCGCAGGCCCGGTCGGGGGGCGCGCAGACTCCGCGCAGCAGGACGTGAGCGCGCGACGCGGCGCC-GCCTCCGCGCTCGTGGCCGGCACCCGCGGGG-CCGCGTAGTCCCC---GCTCCCCGGCGCCGCTGGGCTCCCGGGAGGGC a score=5488.000000 s hg15.chr7_random 771342 37 + 1057565 CGCA---CCAGCGCCCCCTGGCGGCCATCC----GCGCGCCGCG s mm3.chr15 86345162 44 + 104111694 GGCAGGTGCAgcgcggccgggtggccggccaggggggcgccgcg s rn2.chr7 112565632 44 + 139049774 GGCAGGTGCAgcgcggccgggtgcccggccaagggggcgccgcg a score=108.000000 s hg15.chr7_random 771775 14 + 1057565 CAGGGACTGCAGAG s mm3.chr16 93068449 10 + 98986639 cagagaatgc---- a score=1316.000000 s hg15.chr7_random 771789 36 + 1057565 TCACATAAGAGAGCATCGCATAGAGCAAGTAACACA s mm3.chr4 129477936 33 + 152921959 TCACAGAGAGGCTCCTCACATAGGGT---CTCCTCA s rn2.chr5 30320547 33 + 191625135 TCACAGAGGGCCTCCTCAAAGAGCCT---CTGTTCA a score=3390.000000 s hg15.chr7_random 771828 35 + 1057565 AGGGGGCACTCACTAAAGACAGCACCCACATAAAG s mm3.chr4 129477910 34 + 152921959 AGTGGGC-CTCCTCACAGAGGCTGTCCTCACAGAG s rn2.chr5 30320521 34 + 191625135 AGAGGGT-CTCCTCAAAAAGGGCCTCCTCACAGAG a score=3991.000000 s hg15.chr7_random 771863 61 + 1057565 AGAGCACCTACATACATAGAGCACTCACATAAAGAGGGCGCTCACATAAAGAGAGCACTCA s mm3.chr4 129477910 59 + 152921959 AGTGGGCCTCCTCACAGAGGCTGTCCTCACAGAGAGGCTCCTCACAT--AGGGTCTCCTCA s rn2.chr5 30320521 59 + 191625135 AGAGGGTCTCCTCAAAAAGGGCCTCCTCACAGAGGGCCTCCTCAAAG--AGCCTCTGTTCA a score=4187.000000 s hg15.chr7_random 771927 57 + 1057565 GAGCATCTACACAGAGAGCACTCCCATAGAGAGAGCACCCACATACAGCACTCAGTA s mm3.chr4 129477913 56 + 152921959 GGGCCTCCTCACAGAGGCTGTCCTCACAGAGAGGCTCCTCACATA-GGGTCTCCTCA s rn2.chr5 30320524 56 + 191625135 GGGTCTCCTCAAAAAGGGCCTCCTCACAGAGGGCCTCCTCAAAGA-GCCTCTGTTCA a score=5716.000000 s hg15.chr7_random 771984 244 + 1057565 AAGAGAGCACCCACATACAGAGAGCACCCACATAGAGGGAGCACCCACAGAGAGAGCACTCACATAGAGCACTCACTAAAGAGAGTGCCCACATAGAGAGCACTCCCACAGAGCACC--CATATAGAGCATCTGCATAGAGAGAGCACCCACACAGAGGGAGCACCCCCATAGAGAC-------------AGCACTCACATAGAGCACCCCCCTAGAGAAAGCACCCCCATAGAGAGAGCACCCTTATAGAGAGAGCAC s mm3.chr4 129477969 250 + 152921959 TTGAGGGCCTCCTCAGA--GAGAGCCTCCTCACAGAGGGCCTCCTCACAGAGGCTGTTCTCACAGAGAGC-CTCCTCAGAGAGAGCCTCCTCACAGAGGGCCTTCTCACAGAGAGCCTCCTCATAGAGGACCTCCTCACAGAGGGTCTCCTCACAGAGGG--CCTCCTCACAGAGGCTCTCTTCAGAGTGGCTGTCCACAGAGAGAGCCTCCTCACAGAGGGCCTCCTCACAGAGGG--CCTCCTCATAAAGGG--CCT a score=6854.000000 s hg15.chr7_random 772228 103 + 1057565 CCTTATAGAGAGAGCACCCCATAGAGAGAGCACCCCTAGAGAGCACCACCATAGAGAAAGCCCCCACACAGAGGGAGCACCCCCATAGAGACAGCACCCCTTA s mm3.chr4 129477873 96 + 152921959 CCCTATAGTGAGGCCAAGAAGTAGCTAAGAGGCTCACAGTGGGCCTCCTCACAGAGGCTGTCCTCAC----AGAGAGGCTCCTCACATAG---GGTCTCCTCA s rn2.chr5 30320484 96 + 191625135 CCCAATAGTGAAGCCAAGAACAAGCTAAGAGGCTCACAGAGGGTCTCCTCAAAAAGGGCCTCCTCAC----AGAGGGCCTCCTCAAAGAG---CCTCTGTTCA a score=199.000000 s hg15.chr7_random 772331 18 + 1057565 GAGAGAGCACCCCTTAGC s mm3.chr4 129477969 17 + 152921959 TTGAGGGC-CTCCTCAGA a score=20918.000000 s hg15.chr7_random 772349 960 + 1057565 GAAAGCACCCACACAGAGGCAGCATCCACACAGAGGGAGCACTCACATA----GAGCACCCCC---TAAAGAAAGCACCCACATAGAGAGCATCCCTATAGAGAGCACCACCATAGAAAGCCCCCACACAGAGGGAGCACCCCCATAGAGACAGCACCCCTTAGAGAGAGCACCCCTTAGCGAAACCACCCACAGAGGGAGCACGCACACAGAGGGAGCACTCACATAGAGCACCCCCCTAAA----GAAAGCACCCCCATAGAGAGCATCCCTATA----GAGAGAGCACCACCATAGAGAAAGCCCCCACACAGAGGGAGCACCCCTATAGAGAGAGCATCC-----CTTAGAGAGAGCACCCATAGAGACAGCACCCACACAGAGGGAGCACCCTATAGACACAG--------CACTCACACAGAGCACCCAC-TAGAGAAAATACCCCCATAGAGAGAGCACCCCATAGAGCCCCCACACAGAGGGAGCACCCCCACAGAGAGAGCACCCACACAGAGGGAGCATCCCATAGACAGAGCACTCACATAGCGCACCCCCATAGAGCACCCACACAGAGGGAGCACCCCCATAGAGACAGCACTCACATAGAGCACCTCCATAGAGAGAGCACCCCCATAGACCACTCACATAGAGCACCTAGAGAGAGCACTCACATAGAGAGAGCACTCACACAGAGAGAGCACCCACATAGAAAGAGCACTCACATAGAGCACCCATAGAGAGAG----CACTCACAGAGAGAGCACCCACATAGAGA--GCACCCACATAGAGAGAGCACCCACAAAAAGAGCACCTACATAGAGAGCACCCACATAGAGAGAGCACCCATATAGAGAGAGCACCCACATAGAGAGAGCACCCAAATAGAGCATCTACATAGAGAGCACTCACATACAGAGAGCACCTACATAGCACTCACATAGAGAGAGCACCTACATAGAGAGAGCACCCACATAGAGAGAGCATC s mm3.chr16 93067923 889 + 98986639 GAGAATGCTcacacacagagaatactcacacacagagaatactcacacacacagaatgctcacacacacagaatgctcacacacacagagaatgctcacaca---------cacagaatgctcacacacacagagaatgctcacacacagagaatgctca--------------------------cacacacagaatgctcacacacacagagaatgctcacacacagagaatgctcatacacacagaatgctcacacacagagagaatgctcacacacagagaatgctcacacacagagaatgctcacacacacagagaatgctcacacacacagaatgctcacacacacagaatgctcacacacacagagaatgctcacacacaGAGAATGCTC-ATACACAGAGAATGCTCACACACACAGAGAATGCTCACACAAAGAGAATGCTcacacacagagaatgctca--------cacacacagagaatgctcacacacagagaatgctctcacacacagagaatg-ctcacacacagagaatgctcata-------cacacagaatgctcacacacagagaatgctcacacacagagaatgctcacaca---------cagagaatgctcatacacacaGAATGCTCATACA-------CAGAGAATGCTCACACACAGAGAGAATGCTCACACACAGAGAATGCTCATACACAGAGAATGCTCACA---------CACAGAGAATGCTcacacacacagagaatgctcacacacagagaatgctctcacacacagagaatgctcaca-----------cacacagaatgctcacacacacagagaatgctcacacacagagaatgctcacacacagagaatgctcaca---------cacacagagaatgctcacacacagagaatgctca---------cacacacaGAATGCTCACACACAGAGAATGCTcacacacacagagaatgct a score=41659.000000 s hg15.chr7_random 773309 1474 + 1057565 CACAAAGAGAGAGCACCCACATAGAGAGAGCATCTACATAGAGAGAGCACTCACATAGAGAGAG----CACCTACATAGAGCACTCACATAGAGAGCACACACAGAGAGCACCCACAGAGTACCCACATAGAGAGAGCACCCATATAGAGCA--CCTACATAGAGAGAGCACCCACATAGAGAGAGCACTCACAGAGAACACCTACATAGAGCACTCACATAGAGAGAGCACCTACATAAACAGAGCACTCACATAGAGCACTCGCATAGAGCACCTACATAGAGAGAGCACCCACATAGAGAGAACACCCACATAGAGAGAGCACTCAGAGCACCCGCATAGAGAGCACTCCCATAGA------GCACCTACATAGAGAGCACTCACATAGAGCACCTAGAGAGAGCACCCACATAGAGCACTCACACAGAGAGAGCACTCAGAGAGAGCACCTACATAGAGCACTCACATAGAGAGAGCACCTACATAGAGAGAGCACCTAGAGAGCACTCACATAGAGCACCTACATAGAGAGAG------CACCCACATAGAGCACCCACATAGAG------CACCTACATAGAGAAAGC--ACTCACAGAGAGCACCCACATAGAGAGATCACTCACATAGAGTACCCCAGAGAGCACCTACATAGAGAACACTCA--CATAGAGAGTGCACCCACATAGAGAGAGCACCCACATAGAGAGA--GCACCTACATAGAGAGCACTCACATAGAGAGAG----CACCCACATAGAGAGAGCACCCACATAGAGAGAGCACTCACATAGAG--------CACTCACATAGAGAGAGCACACACATAGAGCA--CCCACATAGAGAGAGCACCCACATAGAGAGAGCACTCACATAGAGCACCCACATAAAGAGCACCCACAAAAAGAGCACCTACATAGAGAGAGCACCCACATAGAGAGAGCACCCATATAGAGAGAGCACCCACATAGAGAGAGCACCCAAATAGAGCATCTACATAGAGAGCACTCACATACAGAGAGCACCTACATAGCACTCACATAGAGCACCTACATAGAGCACCCACATAGAGAGAGCATCCACATAGAGAGAGCACCCACATAGAGAGAGCATCTACATAGAGAGAGCACGCACATAGAGAGAGCACCTACATAGAG------CACTCACATAGAGAG----CACACATAGAGAG----CACCCACATAGGGTACCCACATAGAGAGAG--CACCCATATAGAGCACCTACATAGAGAGAG----CACCCACATAGAGAGAGCACTCACATAGAGAA----CACCTACATAGAGCACTCACATAGATAGAGCACCTACATAAATAGAGCACTCACATAGAGCACTCGCATAGAGCACCTACATACAGAGAGCACCCACATAGAGAGAACACCCACATAGAGAGAGCACTCAGAGCACCCACATAGAGAGCACTCCCATAGAG------CACCTACATAGAGAGCACTCACATAGAGCACCTAGAGAGAGCACCCACATAGAGCACTCACATAGAGAG s mm3.chr16 93067915 1430 + 98986639 CACACACAGAGAATGCTcacacacagagaatactcacacacagagaatactcacacacacagaatgctcacacacacagaatgctcaca---------cacacagagaatgctcaca-------cacacagaatgctcacacacacagagaatgctcacacacagagaatgctcacacacacagaatgctcaca-------cacacagagaatgctcacacacagagaatgctcatacacacagaatgctcaca------------------------cacagagagaatgctcacacacagagaatgctcacacacagagaatgctca-----cacacacagagaatgctcacacacacagaatgctcacacacacagaatgctcacaca---cacagagaatgctcacacacaGAGAATGCTCATACACAGAGAATGCTCA-------CACACACAGAGAATGCTCACACAAAGAGAATGCTcacacacagagaatgctca-----cacacacagagaatgctcacacacagagaatgctctcacacacagagaatgctcacacacagagaatgctcatacacacagaatgctcacacacagagaatgctcacacacagagaatgctcacacacag------agaatgctcatacacacaGAATGCTCATACACAGAGAATGCTCACACACAGAGAGAATGCTCACACACAGAGAATGCTCATACACAGAGAATGCTCACACACAGAGAATGCTcacacacacagagaatgctcacacacagagaatgctctcacacacagagaatgctcacacacacagaatgctcacacacacagagaatgctcacacacagagaatgctcacacacagagaatgctcaca-----cacacagagaatgctcacacacagagaatgctcacacacacaGAATGCTCACACACAGAGAATGCTcacacacacagagaatgctcacacacacagaatgctca-----------tacacagagaatgctcacacacacagaatgctcaca-------cacacagaatgctcaca---------cacacagaatgctcacacacacagaatgctcatacacacacagaatgctcacacacacagaatgctcacacacaGAGAATGCTCACACACAGAGAATGCTCACACACACAGAGAATGCTCACACACAGAGAATGCTcacacacacagaatgctcacacacagaatgctcacacacacagaatgctcacacacagagaatgctcacacacacagagaatgctcacacacagagaatgctcacacacacagaatgctcacacacacagaatgctcacacacacagagaatgctca-----cacacacagagaatgctcacacacagagaatgctcacacacacagaatgctcacacacagagaatgctca---cacacacagagaatgctcacacacagagaatgctcacacacacagagaatgctcaca-----cacacagaatgctcacacacacagaatgctcacacacacaG a score=5086.000000 s hg15.chr7_random 774783 229 + 1057565 CACCCACATAGAGAGAGCACTCAGAGAGAGCACCTACATAGAGCACTCACATAGAGAGAGCACCTAGAGAGAGCACCTAGAGAGCACTCACATAGAG------CACCTAGAGAGAGCACCCACATAGAGCACC--CACATAGAGCACCTACATAGAGAAAGCACTCACAGAGAGCACCCACATAGAGAGATCACCCACAGAGTA----CCCCATAGAGAGAGCACCTACATAGAGAACACT s mm3.chr4 129479382 232 + 152921959 CCAGCTGACAGAGGCTGTCCTCAGAGAGAGCCTCCTCATAGAGGGCCTCCTCACAGAGGGCCTC---------CTCATAGAGGGCCTCCTCACAGAGGCTGTCCTCACAGAGAGCCTCCTCACACAGGGCCTCATCACAGAGGGCCTCCTCATTGAGGGCCTTCTCACAGAGAGCATCCTCACAGAGGGCCTCCTCACAGAGTGTGTCCTCCTTATAGAGAGCCTCTATTCCCAGCACACT a score=3172.000000 s hg15.chr7_random 775012 154 + 1057565 CACATAGAGAGTGCACCCACATAGAGAGTGCACCCACATAGAGAGAGCACCCACATAGAGAGAGCACCTACATAGAGAGCACTCACATAGAGAGAGCACCCACATAGAGAGAGCACCTACATAGAGCACTCATAGAGAGAGCACCCACATAGAG s mm3.chr4 129479431 144 + 152921959 CTCACAGAGG--GCCTCCTCATAGAGG--GCCTCCTCACAGAGGCTGTCCTCAC----AGAGAGCCTCCTCACACAGGGC-CTCAT-CACAGAGGGCCTCCTCATTGAGGGCCTTCTCACAGAGAGCATCCTCACAGAGGGCCTCCTCACAGAG a score=213.000000 s hg15.chr7_random 775166 15 + 1057565 AGAGCACCCACATAG s mm3.chr4 129479560 15 + 152921959 GGCCTCCTCACAGAG a score=4968.000000 s hg15.chr7_random 775185 90 + 1057565 ACTGTC-AGGGCTGAGTGGTGCAGTTGCA-----GAGGGAAAGGGCTGCCAGGTA-----TGTCCCACCCTGCTCACTGCCTG--------------CCCCATGCCAGGACCTCT s mm3.chr3 151647730 114 - 160674399 CTTATGGAAAGCAGAGTGA-GCATAAATACGGGTGAAGCCCGGGAACCTCAGGTGACAGTTGTCCTACTGTGATCTCTGCCTGTATGAACCAGGCCTCCCCAAGCCTAGACTTCT s rn2.chr2 90889098 106 + 246339213 CTTATTAAAAG--GCGTGG-GCATAAAC------GAAGCTCAGGAACCTCAGATGACAGTTGTCCCACTGTGATCCCTGACCGTGTGAACTGGTCCTCCTCAAGCATAGACGCAT a score=36071.000000 s hg15.chr7_random 777590 396 + 1057565 GAGAGACTCCAGATGTTGTCTTAATGCCCGAGCCTCAGCTCCCACTTACCCTCTTTCCTGGGCTTTGATCGCATGAGTCTTAATCCCCGCTGGTGACCTGGCCTCCATCCACCTGTTTCCGTCCACTATCTGGGAAGGCAGCAATGCCAACCTCTTCGGAATTCTTTGGCCTAAACACCTGTTCCCATCAACGATTCCTGTTCCTGAAACCTCCTGCCTTCCCAAGGGATGGCACCAACACAGCTGGAGTGAGGCTGTCACTGCTCCCTCCAGCAAATGTCCCC-AAATCATCAAAAAAAAGGAAAGCTTAGTTAATATCTTGCAATTAAAAGTCAGGAGATG-TGTCTGCTTA-ATAACAAATTAGATGATTTCTTCCAAAGTGGACAAAATATGATT s mm3.chr5 123388268 354 - 149719773 GAGAGATTCCAGATGTGAGTGTAACCTCTTCCCCT----GTCCTTTTCTCCTTTTCTTTGGGTTTTCAT-GGATTGGCCATCATCCCTG-TGGGCAGCTGGAC-CAATCCATCTGCTTCTATCTACTACCTG----AGCAATGGGGTGAGCCTCTCTGGAATTCCAT--CTTGAACACGTGTTCCCACCAGCAACTTGTGTTCCCAAGACCTCTTGCCTTGTCATGGAGATACACCAACATAGCTGGGGTGAGGCTATCATGG----CCCAGGCTGAAGCCCCTGAAGTCAT----AAAAAGGAAAGCTAGAACCATG---TGTAAGTAGTGA-----------CCTCTACAGAGGGGTGAAACAAGG------TTGGACAAGTAGATG----CTGCTT s rn2.chr4 1377325 364 + 183307734 GAGAGATTACAGATGTGAGTGTAGCCTCTTGTCCT----GCCCTTTGCTCATTTTCTTTGGGCTTATAT-GTATTGGCCATCATCTCTG-TGGGCAGCTGACC-CAATCCATCTGCTTCTGTCTACTACCTG----TGCAGTGGGGCGAGCCTCTCTGGAATTCCAT--CTTGAACACCTGTTCCCGCCAGCAACTTGCATTCCCAAGACCTCCTGCCTTCTCATGGGGAGACACCAACATTGCTGGGGTGAGGCTACCAGAG----CCTAGGCTGAAGCCCCTGGAGTCCT----AAGAAGGAAAGCTATATCCATG---GGTAATGACAGACAGGGCCACTCCCTCTACAGA-GGGCAAAATGAGA------CTCAACAAGTAGATG----CTGGCC a score=9294.000000 s hg15.chr7_random 777986 87 + 1057565 AAA---AGTTGAGAT----TCTTATTACACATCGAGAAAACTTAGCTCCCTACAAAAACAAAGAGTTTTGCTGTAGTTCATTCCAAGGCTTTGC s mm3.chr5 123388703 93 - 149719773 aAAGATAGCACAGATGCTGTCTGACTGCACATCGTGAAGACTGAGCTCCCTGGGAAAGCTAAGT-TTTCTCTGCCATTCCTTTCAAGGCTTTGC s rn2.chr4 1377771 87 + 183307734 ACAGACAGTGCAGATGCTGTCTGACGGCACATCTGGAAGACTGAGCTCCCTGGGAAAGTTAAGC-TTTCTCCACCATTCCTTCCAGGC------ a score=64232.000000 s hg15.chr7_random 779030 580 + 1057565 TCCGCTGCATGCTGTCCTCTGCCGACCTTTTCTGTCCGTGCAGGTGAAAGGTGCAAAGTCTCCGTGGGTGAGGCAG-GCAAGGT------------------------GCAGAGGGCTTCGG--TGTGGGCGGGGGTGTTAGTCCCTAAGCTCATGG------GCCCCCAGATAACTGAGAGCTGACTCAGTGCTCCCTGGTTTGGACTTAATGTAGTCTAAAGAGATGAAAACTCCTGGTAAGTCTTTCCCTGGCCCTCCCGCCTCTGTGGTCACCTCACCCAGCCACCACTGACCTTCTCTGGAGGAAAATAAACTCCAAACTCTTGACATTCAGTTCACCTAGAGTTGCAAAATGAAAGTTTAAACGGGAAG-----------------AAGCGTTCACTGTGAAGGGAAGGCACCTGCAAGCCCTGGCGTCTGGGCAGAGGG---GAGACTTAGAAGTTTGGGAGCCGGGTTCCCTGTCACTTTTGCAGGTGGCAAGTGAATTTTCACTCAGAGAAAATCAAATCACTTTAGAAGGTGCCTAATGTGGGAAGAAGATGGGGGTTAGATCACCGAGGTCAG---GTCTGTTGTGTGACACCTGAAACGGTTTTCCTGAATTCGGAGTGCCCAG s mm3.chr5 123389747 571 - 149719773 TCCACTGCATCTT---CTTTGCTAACCCTCCTGGAC----TAAGGGAATGATGCAGGGTCTCTGTGGGTGGAGCAG-AAAATATTTGCCCAAACCAGCAAATAGTTTGGCAGAGAGCCACAGAAAGCTGCCAAGGCCTTTAGTCATTAAGGTTACAGCCACCTACCCC---ATGACTGAGGGCTGCCTCAATAGCCC-TCGTATGGCCTTCTTGTA------------TAAGACTCGTGGGGAGT-------TGGATTTCCTGCCTTCACAGTCCCTT--GCCAGCTTCTACTGA-CTGCACTGATGAGGGAGAAAC-CCAAGCTCTTGACATTCACTTTGTCCAGACTTGCaaaattaaagtttaaaattaaagtttaaattaaaaaGGGAAAGCTCTAGCTGCGAAGGGAAGGTGCTTGT-GGCCCTGG-----GGGCAGCAGGCTCGTGTCTTTGAAGTCTTGGAACAGGGCTCCTTGGCAC-TATGCAGGTGGCAAATAGATTTTCATTCACAGAAAATCAGACC--------TGGGGCCTGGTGTG---AGAAGATGAGCAGT-----GCTGAGGTGAGTCTGTCTG------GAAATCTGAAAC-CTCTTCTCCAGCTGGGGATGGTCAG s rn2.chr4 1378673 571 + 183307734 TACACTGCATCCT---CTTTGCTCACCCTCCTGGAC----TACGTGGATGATGCAGGGTCTCTGTGGGTGGAGCAGAAAAATATTTGCCCAAACTAGCAAACAGTTTGGCAGAAAGCCATAGAAAGCTGCCAAGGCCATTAGTCATTAAGGCTACAGCTACCTGCCCC--GGTGACCCA-GGCTGCCTCGATGGCCC------TGGCCTTATTGTA------------TGGGACTCTCAGGGAGT-------GGGGTTTCCTGCCTTCAAGGTCCCTT--GCCAGCTTCTACTGA-CTCCACTGATGAGGGAGAAAC-CCAAGCTCTTGACATTCACTTTGTCCAGACTTGCAAAATTAAAGTTTAAAATTAAAGTTTAAATTGAAAAGGGAAAGCTCTAGCTGTGAAGGGAAGGCGTCTGTAGGCCCCGG-----GGGCAGCCGGCACTCGTCTTTGAAGTCTTGGAGCTGGGCTCCTTGGCAC-TATGCAGGTGGCAAATAGATTTTCATTCACAGAAAATCAGACC--------TGGGGCCTGGTGTGGGAAGGAGATGAACGGA-----GCTGAGGTGAGTCTGTCTG------GAAAACTGAACT-CTCTTCCCCAGCTACAGAAGGTCAG a score=24254.000000 s hg15.chr7_random 782764 242 + 1057565 CCCTGGGGAGAC--AGGAGCACTGGCCCTGGGGAGACAGACAGGCTCTTGAGCAGAACTTGCtggtactg-ggtgaatagtgtgccccaaattaaggtccatccccaaacctcagaatgt-gaccttatatagaaatagggtctctgcagatgtcattggtgaggttggggtgaggtcaccctggagtagggtgagccctcagtacaatggctggtgtccttgtaggaggagcagaggcacagaga s mm3.chr5 123392405 217 - 149719773 CTCTGAGGAGACAGAGGATCCCTGGCAGTGGGAGTGTAGCCCAG-----GAGCAGACCCTGCAAATGCAGTGAtgaagagtatcccccaaactca--cccttctcacaacctc-ggccatgggccttatttgga----------ccaaagatgtgattggttaggttaagatgagatcatcatggagt-gagtgtggcttaaggacaatggcttgtctcctca----------ataaGGCCAATAA s rn2.chr4 1380659 218 + 183307734 TTCTGAGGAGACAGAGGATTCCCAGCAGCGGGGGTGTGGCCCAG-----GAGCAGACCGTGTGAATGCAGTGAtgaatggtgtcccccaagctca--ctcttctcacagcctcaggccatgggccttatttgga----------ccaaagatactattggctaggttaagatgaggtcactgtggagt-gggtgtggcctatggacaatggcttgtcttcaca----------ataaggccaagaa a score=176.000000 s hg15.chr7_random 783006 18 + 1057565 gacacccagagaagatag s mm3.chr5 123392622 18 - 149719773 GATGTCTATGGGACAAAA a score=21910.000000 s hg15.chr7_random 783035 389 + 1057565 cagaggggaggctggagccaaggacccccgggattgccggccacaccagaactgggccaggtgcagggc------gatcctccctgca----------------gacttcagagggggtgaggccctgacaccctcatctaggacttc-cagcctctagagctgagagggaaggaatgtccactgttaaaggtgcccagtctgtgggacgtcattctggtggccacaggagactcatacaGCGCTTGGAGGAGGGGGTCAGTGGACAGCCAGAAGGGCAGCAAGGCCAGCAGCTCCAGAGCTGCCACCTCC--GCTGTGGCATCACTTTGCTTATTTTGGTGCCCGTGTGTCCTCACCTGTCTGCCCTGAGGGGGGGG-AAGTGC-AAAGCCCAGGGATGGGGGGAAGTGAGTGAG s mm3.chr5 123393692 314 - 149719773 AGATGTCCTGACAAGA---AAGGACCCAGATGGTTGT--GTCTAAGCTGGAAAGAGCCAAGAGAAGGACTGGAAAGGACTGCCCTGCAGGGTTGGCTGGCATATGGCTTCAGGGAGAACATGGCT----------TGCCCAGAACTTC--------------CAGGCCTGCAAGAGCATGCATTTTTGTTAGT-CACCATCCATGGGACTCTGTT---------ACA-GAGACCCAT--------------------------------------------GAGGTCAGCCACTCTGGAGTCACCTTCTCCCAGCTGCAATGTCTCTTTAGCTTCTTCGGTGC--------CCTCACCTGTCTGCCTTAAGGAAAGGG-AGATGC------CTTGGAAT---AGGAAGCAAGGGAG s rn2.chr4 1380879 328 + 183307734 agatgtcctgacaggg---atggacacagatg--------tctaagctggaaggagccaagagaaggactaggaaggactggcctgcagggtcggctggcacatgacttcagggagagcatggcc----------tgctcagaacttctcagatttcaactccaagcctgcaagagcgtgcacttctgttaat-catcgtgcatgggactttgtt---------aca-gAGACTAGT--------------------------------------------GAGGTCAGCCACTCTGGAGTCACCTTCTCCCGGCTGCATTGTCACTTTAGCCTCTTTGGTGC--------CCTC-CCTGTCTGCCTTAAGGAAAGGGGAGATGCACGGGCCTTGGAAT---AGGAAGCAAGAGAG a score=102048.000000 s hg15.chr7_random 784222 1890 + 1057565 GTTTTGTCTGCAGAGCTCTGCTTGCAGGTG-------------------------CCCGCAGTGCAGAGACCACAGGGGTCCCCGCGCC--GCCGGATGCCCGAGGATGTGAGACTGTGCACCATCTGCCCGCTGCCCGCTGCCACGTCCGTG--TGCTCGGGGCAGGGAAGAGCTCAAGCCAGTGACCTTGAAAGAGGGAACACAGCTGAGAAACGTGTCAGATGC-----------CCTTCCGGGCTGGCGGCG--CTGGC---------TGCACATCTGTCTGGAGTGCGTGGATGCCAGAAGTCACTGTCCATGGGGTGACAGCGCAGCCTGGAGCTGATGAGAGGCTGGG-----TGCGCGCTGCAC------GTCTCCAGCAGGTCCCCACA-GCAGGCTCTGCTGCAGGCATCTGGGCGGAACTGAGACTGGACAGACCGAGGCTGCCAGCAGAGGGAGGGGCAGGAGGCCTGTCCCAGGGAGGCACAGAGGGGGTGCGGCAGGGcctcccccagcctctccctcgcctggcacccccaccttccctcctttcctcg-tgatcgccttcccttccctttcctttcttcttcccttcAGAAGGAGGAGCTGTGGGCAGAGGGACTTTGG-AAAGCATGGCGTTACTTACCTTTCACACCTCTCAGGGCTTACGCCATCCTCCTGCGAATGATGAAAGACATCATCCCTGCCTCCAGCTGGGCCTCGGAAGAGAGCACTGATTTACAGAACGGGAGCTTTCCCCTTAGCGTGGCCCCCAGGTCAGAGTTTCCC----AGACGGAGGGCCTTGGAA-GATTGGCTTCTCTCGGTG---TTTCTGGC------AGACCAGGCAGAAAGTGAGGGGCAGCTCG-TGTTGGAAAGAGTTCGGGACACGCCGCCACCCGTGACCTCTCCTAGA----GGTGACGGC-ATATGTGTGAGCAGAGGGAA-GGCTCCGAGCAGCCCCGGAGGAAGTACACATGCGTGGCTTTATC-TAACCAGACATTTCCCT---TGGAGTCCTTTCCCCCACGGAGGGTGGACTGACACCTCAGAACCCT---GTGTTCTGGAGACCCT--GGGGGGATCCTCCCTGGCAGCCCTGCGGGGAAACAGTC---TCTGGGTGCAGAGCAGCGGTGCC-TGTGCTTTTTGTGTTTATGAGTCACTCATCGAGCAGTCTTTGCCCAATGAAAGGTTTGAGGAGCTGTTACTTGGGCCAAGTCCTGGGGAAGTGATGAAATAGAGACGGTTTGTCTTCAGTGCTGGCAACCTCCCCTTTTTAGTCACTTCTTTCCTGTCTCCAGAGAGGGTTTCCTCTCTGGTCATCC--ACTTGCTCAGGCATC-AGTGTTCTGATTCTGCCCAAACTTTCCTCTCTTTTAAATTATCCTTCATGGCTAGGATGGGAGTACTTGTTTATACTAATGTGTAAATGACTAACCAGCTAATATTGCTTATATTCTGTGTGGGCAGGAGGCTTTGCATAGGCCTCTCACATGTCCCGAGGTT--TGCCTTTAGGCAGAGGACCGTCTCCT---CTGACA-GCGTTAACTTAATGCACCT-------GCTACGCTTAATGAATACTTAGGCTTGATGAATACGCAGATGCGCCAGATCAGTTC---------------TGGGTAAAGGACAAACA-CCGTGAGCAGGACAGGTGGGGTCTGGAGGGGGAGGCAGATGCACCAAGGCAAGGGGAAATACCTAAAGACTGTTAGTGTCAGCACAGCGTCGCTTCAGGCCGAGTAAGCAATGCCCATCCAGAAAGTGGCAGATGGTGGCGTGTGGAGCAAGACATGGAGAGAGAAGATGAAAGATGCTCAGATcggggctcggcaaactttctctacaaaggccagatgacaaataaaggaacggtggctgtgtgggccacccagggcctgcctgaatcattgtc-tttgttttctgacaacccttcagggatgtaggcaccaCAGTCGGCTTGCCTGGGGCCGC s mm3.chr5 123403241 1657 - 149719773 GCTTTATTTGCAGATGTCTACTCACTGCTGAGACTGCTTCACAGAGTCTTAGCATCCCCTGCTACAGACACAACAAGAGTCCTCATGCATTGCTCTGTGCTGGAGGATAAGACACTGCCTGTCATCTGTCCATGTCATGCTGCAAAAGAGGTGTTTGCTCACAGCAAGGAA--------------------------AGGAGTATGGCTTAGAGTTGTGTCTGCAGCAGTCTGATCAGCCAGCCATGCCAGCAGCAGCCTGGGTGATCTAGTTACACAGCTGGCTGGGACATGGGGACAATAGCAGCTGCTGT-GATAGTGTGGTGGCCTTGGGTGG--------ACAGACTGAGACCCATGCATGCTATGCTACCTGGCCTTC----GGTCTATACATGCAAGC-CTACCCTGGCCTTCAGGG-----CTGAGGCTG---AGACAGGAGATG-----ACGGGAAGAGGCA--------GTTTCGGGGA-----------------GCAAGGAC-CACTCTGCTTCTTCCTC--------CGAGCTCCTTCCCTACCCTTCTCA-TACTCTCAGTGC------------TCCTCTTTCTCTTCTGAGGGCAAGACTGTGTGTCGGAGACGTTTGACCAAGTGTGATGTTGCTTTATCTGTGT--ATCTCAGGCCTTAT--------------AAAAATGAGAGAAGTTGTCTCT---------------------CAAAGCA-----------AGCAAGAGCC----------CATGTCTTCCCAGTCTG----TCTC--GGAGACAAAGAACATTGTCAGTATGAGCTGGGCACTGTGGCATTCCAGGTAGTGAAAGAATGGGCATACAGCAAGGGAGAGGTTAAAGTTAAAATGCAT--------CACTGTCATTC----CAATTCCTGGACTATAGTGAGCCC-A-------GTGCTCAGGCTA-GGTTCTAGGAAGCCCAGG-----GTCCACATCTGTGGTCCTATTGTAGTGGGGCCTTCCCCTGTATGTTTTCCCTTCTGTGGTAAATTAGGGCCTGGGCTTTGAGAACACTTCAGGGCTGTGGGAACACCTCAGAAGAGTCTTACTTTATCAAATAGAAGAAAAGTAACCCAGTCCAGAAACCAAG--GCTGTGTAATTTGCTTTGCA-GTTTGTGATCCA------GGGGTGCCACTGTT-----AAGGATTTGAAGAGCTGTGATGTGGGCCAGCCCATAAGGAAG-ATTGTAGTGGA---TGTTTGTCTT------------GTTATCCTTTT-GTCTCCTT---TCCTGTTG---GAGA------------TGCTCACCCCCACTTGCTCAAATTTCTAGTGCTATGTGTTTGCAC---TTTTCTTGTCTTCCAAGTTATCCTTCGTGGACAGGCTGGGGAAGCATGCTTATACTTA-----AGATGGCTAGCCATTCACTATGGCTTAAATCCTGTGTGGGCAGG-GACTCTG----CACCATCCTTCCATTCCAAGGTGCATGCCTCCGAGCACAGCAGCACTCTTTAACATGTCT-ACATCAACACCCACAATTT-----------CAAACACTGGGAACTT-GGTTGGAAGCATTACCATTTATTCAACAAGAGTCCATGACATACTTACCATGAGT-GAGGCCAGATG-TGATGAGCAAGACAGGCAGCATCCTGGGGCTGAGGCAGAGCCCTAAAGACAGACAGGA------GAATGTTCTTCATGTGAGCACAG-GTCACTCTAGACAGAGCACGAAATGATGGTCACGGAAGTGGTGCCAGGCAGAGCATGAAG---GACAGGGACAGAGGGAA-----------------------CTGCAGAGTC-------------------------------AGGGGAGCCATGTGGGCCACACAGCTTCTCTGTTCAT-GTGGTCATTTGTGTTGTAACAA---------------------------------CCTGGAGAGAC s rn2.chr4 1388434 1629 + 183307734 GCTTCATTTGCAGATGTCCACTCACTGCTGAGCCTGCTTCAGAG-TTCTCTGCATCCTCTGGTGCAAACTCCACTGGGGTCCTTACGCCTTGCCCCGTGCTGGAGGACGTGACACTGCCCACCATCTGCTCACGACATGCTGCAAAGGAGGTGTTTGCTCAGAGCAAGGAAGATCTAAAGCCCATGACCTTGAGCAAAGGAATATGGCTTAGAGTTGTATCTGCCGCAGGTTGATCAGCCAGCCATGCCAGCAGAAGCCTGGG-------------------------ACATGGGGATGATGTC--CTGCTGT-GATAGTGTGGTGGCCTTGATCAGGACTGACCACAGACTGAGATCCACTCATGCTATGC--------CTTC----GGTCTACACATGCAAGT-CTGCCCTAGGCTTCAGGA-----CTGAGGCCG---AGGCAGAGGATG-----GAGAGAAGAGGCA--------GTTGCAGGGA-----------------GCAAGGAC-CATTCTACTTAC-----------------------CCCTTCCCTTCTCAATATTCTCAATGT------------TCCTCTTTCCCTTCTGAGGGCAGGACTGTGTACAGGAGACATTTGGCCACATGTGATGCTTCTTTATCTGTGTGTATCTCAG-----AT--------------AAAAATGAGAGAAG----------------------------------CA-----------AGCAAGAGCC----------TGAGTCTTCCCAGTCTGACTGTCTCAGGGAGACAAAGAGCACTGTCA-TATGAGCTGAGCACTGTGGCATTCCAGGAAGTGCAAGGTTGGGCAAACAGCAAGGGAGAGGTTGAAGTTAAGATGCAC--------AGCAGCCATTC----CAATTCCTGGACTACCTTGAGCCCCA-------GTGCTCAGGTGAAGGTTTTATGAAGTCCAGG-----GTCCACCTCTGTGGCCCTATTGTAGTGAGGCCTTTCCCTGTATGGTTTCC-TTCTGTGATAGCTCAGGACCTGGGCTTTGAGAGCACCTTGGGGCTGTGGGAACACTTCAGAAGAATCTCACTTTATCAAATAGAAGAAAAGCAGCCCAGTCCAGAAGCCAAG--GCCGTGTA-TTTGCTTTGCA-GTCTG--ACTCA------GCGCTATCGCTGCT-----AAGGATTGGAAGAGCTGTGATGTGGGCCAGCCCCTAAGGAAT-GTTGTAGTGGA---TGTTTGTCTT------------GTTATCCCTTTCGTCCCCTTCTCTCCTGTTT---GAGA------------TGCTCATCCA-ACCTGCTCAAACATCTAATACTGTGTGTCTGCGC---CTTTCTTGTCCTTCGAGTCATCCTTTGTGGACAGGGTAGAAAAGCATGCTTAGACTTC-----AGATGACTAGCCAGTCACTGTGGCTTAAATCCTGTGTGAGCAGG-GACTCTGTGTGCACTGTTCTCATGCTCCATGGTGGATGTCTCCAAGCACAGCAACACTTCTTAACTTGTCTTACACCAACACCAAGAACTTGGCCGGAGGCACTACCATGGAGAACTT-GGCTGGAGGCACTACCATGTATTCAACAAGAGTCCGTGAAGCACTTGCCACGAGT-GAGGCCGAACGGTGCTGAGCAAGGCA---------------CTGAGGCAGACCCCTGAAGACAGACAGGA------GAATGTTCCTCATATGAGCACAG-CTCACTCTAGACCAAGCATGAAATGGTGGCCATGGAAGTGGTGCCAGGCAGAGCATGAAG---GACAGGGACAGAGGAAA-----------------------CTGCAGTCT-----------------------------------GTAGCCATGTGGGCCACACAGCTTCTCTTTTCAT-GTGGTCATTTGTGTTGTGATAA---------------------------------CCTGGAGAGGC a score=15709.000000 s hg15.chr7_random 786150 107 + 1057565 CCACTGGAGGGCACTGTTTTTAGAGAAAGTTCCTGGTTTCCTTCAAAGGAATTAAAACACAAATGTAAAACGTATTGGTGGACGTCCAGGCAGGAGAAGGAGGCAAG s mm3.chr5 123404914 107 - 149719773 CCACTGGAGAGCTCTGTTTCCAGGAGAAGTTTTTGGTTTCCTGAACACAATTTAAATAAAAATAGTAAGGAGTATCAGTGACAGTGGGGCGGAGAgaaggggaagag s rn2.chr4 1390688 107 + 183307734 CCACTGGAGAGCTCTGTTTCCAGGGGAAGTTTCTGGTTTCCTGATCACAATTTAAACAAAAAAAGTAAGGATTGTTAGTGACAGTGGGGTGGAGAGAAGGGGGCAGG a score=21162.000000 s hg15.chr7_random 847550 224 + 1057565 GAAACGAAGCTTTGTAGGTCCCCCTGCACTACCACCATCATGGGCAGCATAGCAGATGGGTTCTGGGACACC---AGCTAAAATG-TGTGCAAGAGAAACCAGGGCTCATGGCAGACG-TGT-GTTTCTCTG--------------TTTTGTTGACCAACTTCTGCTAGAATTCATAGCCATCTAGCCTATGTATTGGATTTTTA---------------------TTTC----TGTGACGTCTGCATCTTTTAAAAATATCAGTTGGg s mm3.chr5 15674960 251 - 149719773 GAAAAAGACATTTATGGGTTCCTC----CTACCCACTT--------GCATTGTTGAAGTGTTCTAGAATACCATAGTCTAGAATGTTGTGCCTAGGAAAGCCAAGCTCAGAGTAGGCACTGTGGCCTCAAAGAATTTCAGCAGGACTCTGGTTGACCAAGTTTTGCTAGAATTCAGAGCTTCATAGAACATCAATTTCACTTTTAAACCAGTATATTGGGGGAGGGGGTC------TTTTCTTTGATTATTTTCAAAATATTACTTGGC s rn2.chr12 21105950 253 + 46874691 AAGAAAGATGTTTATGGGTTCCTC----CTATCCACTT--------GCATTGTTGAAGTGTTCTAGAATACT---GTCTAGAATGTTGTGCCTGGGAAAGCCAGGCTCAGAGTAGGCACCGT-GCCTCAAAGAATTTCAACAAGATTCTGGCTGACCAAATTTTGCTAGAATTCAGAACTTCATAGAACACCAATTACATTTTTAAACCAATATTTTTTCGTGGtgttttgttttgttttgttttattATTTTAAAAATACTGCTTGGC a score=26822.000000 s hg15.chr7_random 848304 355 + 1057565 TCCAGATGTTGTCACATGGGCCAAGCAACCAAAGTCACATCTTAGAGTTGTGGACTGTGTAATCAGATAAGTGTGGCTA----CAGTCACAGAAGGTCAGGGTAGAAAGAGGCTTGGAGAGGGGCACACTTCTAGCCAGAGCTTTCCTACTGAGCTCCTTAAAGCTCAGGGGAAAGTGGGACAGGGTTGGGGGGCGACCTAAATCCCACACCCTCCCATCTTCAACCAGAGCAACCCCATTTGTATCTGCTCAGCAGTATCATGCATCCATGTAAAATTTTATTTGAAAATGGCCTTCTGCAATTAAAACTACAAAAAAAGATTGAAAG--------TGGCCA-----------------------ACTTAA----ACTCCACTCTGTTTCTTT s mm3.chr5 15675214 303 - 149719773 TCTGGACTCTGCCGTGTGGACCAAGTGACT----TGACATTTGAGATTTGTGGTATGTGTAG-CAGGTAAGTGTGGCTA----TGGTCATAGAGGGCAGGCCAGGGATGAGGCCTGGATGTCAGTGCAC--CTAGCCAGAGC------------CTGCTTGAAGCTCAGGTGGAAATGAGGGAGG--TG---------CTGAGTTACACATCC--------------------ACTCCATTTGTCAC-------------------------------------AGAGGATGCTCTTCTGCCACAAAGATGGCAAAAAATGTCTCAAAGCACAGCCTTGACCAGGTATCTTCCTCTATCACTTTCTACTTCATTTTTCTCTATTATGTTTACTT s rn2.chr12 21106206 286 + 46874691 TCTGGACTCTGTCATGTGGGCCAAGTGACT----TCACATTTGAGATTTGTAGTATGTGTAG-CAGGTAAGTGCGGCTATGGTTGGTCGTAGAGGGCGGGCCAGGGATGAGGCCTGAGTGTCAGTGCAC--GTAGCCAGAGC------------CTGCTTGAAGCTGAGGTGGAAATGAGAGAGG--TG---------CTGAGTTACACGTCT--------------------ACTTCATTTGTCAC-------------------------------------TGAGGATACTCTTCTGCCA---------------------CAGATCACAGCCTCGACCCGGTATCTCCCTCTATCACTTTCTACTTCATTTTTCTCTGTTATGTTTATTT a score=33896.000000 s hg15.chr7_random 848659 338 + 1057565 TTTGATTTGGGAGACTGATGTGCACAGAAGGGAAGTGTCACCTAATGAA-----ACTGTA----ACCTCACCACAGATGCCTGCCCATGGCTGGTGGAG------------------------CTCCCAAGGCCTGGGCCACACCCTAT----GTGCCCCATGCCCAGCAAGTGGAGGGGGGTGTGGTCAGTACATGTTTGTAAGATAAAGAAAAACATGCTTCCCAATCAGCCATATTACCCAGAGGGCGATATTGATTTAGATCTTATTTCAGCTTGGCTACAGAG----GCTCAGGTGCCAGTGAGCA-------GAAGTCTGGCCATTGTGGTGGATTCTGGAAGATAATGTGCTATACTATTAGCAGGGGTGCAATTTGGG s mm3.chr5 15675915 352 - 149719773 TTTGATGTGAGAGTTCAAGGAGCTCAG---------CACACCCAGTGAGTCCACATTGTGTGTACTCTCACTGCAGATGCCTGCCCAAGGCTCGCTGAGGCTGCTCAATGAGGCTAGCTGAGTTCTCCAGGGTCTTTG-AGCATCCTGCTTGAGTGTCCAGTGCCCAGAA-------GGGGAT----TCAGTGCATGTTTGTCAGAATAGGA---ATATGTTTCTTTCTTGGCCATATGTTTCATAAGG-GGCATTGACTTAGACTTCAAT--------GATATAGAACTGAACCCAGATACTAATGATCTAAGCCAGGAAGCCAGGTTCTTCTAGCTGTTTctggaagaaaatacaccaaactgttaataggggtt-aacttggg s rn2.chr12 21106893 343 + 46874691 TTTGATGTGGGACTTCAAGGAGCTCAG------ATCTGCACCCAGCGACTCCACATTGTG----CTCTCACTGCAAATGCCTGCCTAAGGCTAGCTGAGGCTGCTCAATGAGGCTGGCTGAGTTCCCCAGGGTCTATG-AGCATCCTGCTTGAGCATCCAGTACCCAGTA-------TGGGAT----TCGGTGCATGTTTGTCAGAATAGGA--CACGTGTTTCTTTCTTGGCCGTATGTTTCATAGTG-GACATTGACTTAGACCTCAAT--------GATACAGAGCTGAATCCAGATACTGATGATCT--------AAGCCAGGTTCTTCCAGGCGTTTCTGGAAGAAAAT--ACCAGACTGTTAATAGGGGTTAAACTTTGG a score=6565.000000 s hg15.chr7_random 850505 41 + 1057565 TCCTGGCCAGCTTTGCACACATTTAACTAG--ACTAAGATTTG s mm3.chr5 15677687 42 - 149719773 TCTTGGCCAGCCTTCTACACATCT-TCTAGTAACCAAGACAAG s rn2.chr12 21109128 42 + 46874691 TCTTGGCCAGCCTTCTACACATCT-TCTAGTAACCAAGACAAG a score=23597.000000 s hg15.chr7_random 850851 155 + 1057565 TGAGCTCCCTTCTCAGATCCGTGCCTCTCGACCTGGGCTGAAGGCTTCTACTCTCTCTGGCGTCACCTTCAGGAACCTGCTTGTTACTTCCCTCCTAAGAAT---GTTCCAGAAGGTCTTGGTTTATCTTCTGGAGGGCATTCAAGAACTCAGAGTCA s mm3.chr5 15677729 156 - 149719773 CCAGTTTCTCTGCCAGACACCTGTATGT-GACCTGGATTGAAGGCTTGGGCTCCCTCTGTTGCTTCCTTTAGGAACCTGCTTGATCCCTCTCTTCTGAGAAT-GTTTTTCTTAAGGCCTTGGTTTCATCTTTAGAGGGCATTTGAGAACTTGAAGCCA s rn2.chr12 21109170 157 + 46874691 CCAGATTCTCTGCCAGACACCTGTATGT-GGACTGGGTTGAAGGCTTGGGCTCCCTCTGTTGCTGCCTTCAGGAACCTGCTTGATACCTCTCTTCCGAGAACCTTTTTTTTTAAGGCCTCCATTTAATCTTTAGAGGGCATTTGAGAACTCGGAGCCA a score=39725.000000 s hg15.chr7_random 854792 399 + 1057565 GCAGTGCAGATGGCAGGACTGTGCCTGGGCTGCAGGCGCACATTTGCTGGGTGTGTGCAGTGCAGATTGCAGGGCTGTGCCCGGGATGCAGGCACACATTTACCAGGTGTGTGCAGTGTGGATGGCAGGGCTGTGCCTGGGCTGCAGGTACACATTTACCAGGTCTGTGCAGTGTGGGTGGCAGGACTGTGCCCAGGCTGCAGGTACACATTTACCAGGTGCGTGCAGTGTGAATGGCAGGGCTG-TCATGGGCCGCAGCTGCACATGTACTGGGTGTGCACAGTGTGGATGGCAGGGCTGTGCCTGGGCTGCCGGTACACATTTACCAGGTGTGTGCAGTGTGGATTGCAGGGCTGTGCCTGAGCTGCAGGTGCACATTTGCCAGGTGTGTGCAGTGTA s mm3.chr1 4414726 400 - 195869683 GCTGTGCAGACAGAGGGCCTGAGTGTGAGCTGTGCAGACAGAGGGCCTGAGTGTGAGCTGTGCAGGCAGAGGGCCTGAGTGTGAGCTGTGGGGGCAGAGGGCCTGAGTGTGAGCTGTGGGGGCAGAGGGCCTGAGTGTGAGCTGTGCAGGCAGAGGGCCTGAGTGTGAGCTGTGGGGGCAGAGGGCCTGAGTGTGAGCTGTGCAGACAGAGGGCCTGAGTGTGAGCTGTGCAGGCAGAGGGCCTGAGTGTGAGCTGTGCAGGCAGAGGGCCTGAGTGTGAGCTGTGGGGGCAGAGGGCCTGAGTGTGAGCTGTGGGGGCAGAGGGCCTGAGTGTGAGCTGTGCAGACAGAGGGCCTGAGTGTGAGCTGTGCGGGCAGAGGGCCTGAGTGTGAGCTGTGTA s rn2.chr13 12310024 400 - 105800825 GCTGTACAGGCAGGAGACCCGAGTGTGAGCTGTGCAGGCAGGAGACCCGAGTGTGAGCTGTGCAGGCGGGAGACCCGAGTGTGAGCTGTACAGGCGGGAGGCCCGAGTGTGAGCTGTGCAGGCAGGAGGCCTGAGTGTGAGCTGTGCAGGCAGGAGGCCTGAGTGTGAGCTGTGCAGGCAGGAGACCTGACTGTGAGCTGTACAGGCAGGAGGCCTGAGTGTGAGCTGTGCAGGCAGGAGGCCTGAGTGTGAGCTGTGCAGGCAGGAGGCCTGAGTGTGAGCTGTACAGGCAGGAGGCCTGAGTGTGAGCTGTGCAGGCAGGAGGCCTGAGTGTGAGCTGTACAGGCAGGAGACCCGAGTGTGAGCTGTACAGGCAGGAGATCCGAGTGTGAGCTGTGCC a score=45621.000000 s hg15.chr7_random 855245 780 + 1057565 CAGGGGTAACCATCTAAGACCCTGGGCATCTTCCCCAGCCTGGGCGATTCTCCAAGCCATCGCTTTTCAGCAGGACTGCCAGCAGGGCATCTGTCATGTTCGTCCACCAGCATCATAGCCTGTTTTGGGGAGAAGTAGTATTTCCACACCCCACTCAGGCTGATAGCATTTGAGGAAGAAGAGAAAGAGGGGCTTTTGGGTTTTCTGGTTTCCTTTCTGAAGGTGAACCTGTCACTGGTGAAAAAAATGGTGTTTTTTTTTTTTTTTTTGGACCAAGAAAGCGGCCTTGGCCTCCAGTGCCAGAGCAGGCTCTGGCTGGGGCAGAGGATCCTGGAGAGGATGCTATGCTGTGTTGGGCGGGAAGTCACTTCCTCCCTCCAAACATAGGTGTCCAGTTCTCTCTTCCTCCCTTTGTCAAGTAGGAGCTGTTATGCCAAGGGCAGGCAAGAA--------------------------------------ACAGGCCCCTGAGTGCTCAGTTTCATGGCCGGGCTTTGAAGCAGGAGTTTCCTCTTGGCCCTCAGGCCACACTTCTGTAGGGTGCC---------TCTGCAGCATTTCCCTCCTTGGGCA-GGAGCCTGGCTT---GCAGAGGACAGACAGCAGGAAGAATGCTGGCCTCCCCATGCCACCAGATCCTGTCCCAAGGCCAGCAGGAGGGGAGGGGAAGCAATCTGATCACTGGAGCAGGAGGGGCCAGCTCTGGAGTCCACATGGCTGTGGCTGGGCTGTGCTTCTAGAAGCAGCAGCTCTTGCCGCCTCTCTCTAGGGATTTTTGTCTTTCTTTTAAAAACt s mm3.chr5 15678122 623 - 149719773 CGAGGGAGATCATGCAAAGTTGAGGGTATCTTCCCCAGCACAGGACACACTCGTAGCCATGGCTTTGC--CAGGACTTCTTGAAAAGCACCTGTCACCCTCATCTCCC-------------------------------ATTTCCA----CCCCTGGGCTTCACAGAGCTTCTGGAAGGAAGAAAAGGGAGGCTTTGGG-------------CCTCCTGAAGTTGAGTCCAGCACTGGCACAAAAGATAGG-----------TTCTTTGGAACCAGGCCA--GACCCCAGCCTCCCATGCCC-------------------CAATTCATACCAGAGAG---------------TAGTCAGGAAGCCATTTCCTCCTGCTGACTACCAGGGTCTGGCTTTCTTCTTCCCTCTTCATCAGGGCCAACTTTTTATGTCAAGGGCATGAGAGAGAAAG----------------------------------AGAGGATGCTGACCTCCTAGGTTCACGGCTGGACTTTGAAGT--GTGTTTCCTCTGGGGCCTCAGGCTTCACCACTGGGGGATGCCCGGAAAAGGTCTGTAA----GGCTCCACCGGCCATGAAATCCGGCCTCACCCAGAGTCCCTGCA-CTGAACATCTGCTGGCCTTAC-------------TCCAGCACAAGGCCAG----------------GCACTCTGA----TGG----TGAGGGACCAGAAAAGGCAGCCACCAGAGAG------------GCTGCTCATTACC-CAGATTACACCGTCTC-CTGTAG-------------------CAGGACC s rn2.chr12 21109539 602 + 46874691 CAGGGGAGACCATGCAAAGT-------------------------CACACTCTTACCCTCGGCTTTGC--CAGGACTTCTTGAAAAGCCCCTGTTGCCCTCATCCCCC-------------------------------GTTTCCA----ACCCTGGGCTTCACCAAGCTTCTGGAAGGAGGAAAAGGGAGGCTTTGAG-------------CCTCCTGGTGTTGAGTCCACCACTGGCACAAAAGATAGG---------------------------------------CCTCCCATACCC-------------------CAATTCACACCAGAGAG---------------CAGTCAGGAAGCCATTTCCTCCTGCTGACTACCAGGGTACGGCTTTCTTCTTCCCTCTTCATCAGGGCCAAATTGTTATGTCAAGGGCATgagagagagggggagagagacagagacagagagacagagagagacagagGCTGCTGACCTTCTAGGTTCACAGCTGGACTTTGAAGT--GTGTTTCCTCTGGGGCCCCAGGAGTCACCACTGAGGGATGCCCGGAAAAGGTCTGTAA----GCCCCCACCAGCCATGAAATCCGGCCTCACCCAGAGTCCCTAAA-CTGAACATCTGCTGGCCTCA--------------TCCAGCACGAGGCCAG----------------GCACACTG-----TGG----TGAGGGGCTAGAAAAGACAGCTGCCGGAGAG--------------TTCTTATTACC-CAGACTATGCTCTCTC-CTGCAG-------------------CAGGACC a score=58562.000000 s hg15.chr7_random 856160 556 + 1057565 TGAATTTTATCTTTCCTACCAGCCTTTTCATATGAGCTGAGCCTGCAGGCTGTGCCTAAGCATAGCCCTTTGAACTTGATAGACTGCGAGCTTGGAAAGACTCCTTTGCAGTCTGAGTCCTCTGGCAAATACACTAGCTTGGTTAAGTGGACTTTTCTTTGATTGATGTTGGCTGCATCTAGAAAGCAGGATTGCCACCACTCCT-----TGAAGCACCCTATGATTAGA--GTGAGTGCTG--CTTCTGCTCTGCTGAGGCTGTTGACAAATTGCCTGAAAAGACCCCCTGTCAGAGGATGATGGGCTCGTCTGCAGCAGGGCCACTTGCAGCCCAATTGCTTCCAAGATTAAACCTTTCCAAAGCGGTCTGCACTGCCCGGTACACAGTTG--GGCCA-CTGGTTTAAGATTACAGATGAAGGTACTGAATTGGATCTCATTTAAAAATATATAGGTTTTAAAGTTTGAGGGCTCAGGAAGAAAATGAAATCCTTTGTCCCAAACCAGGGCCTGGT---TTTGTCAGTGgtgcgtgcacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt s mm3.chr5 15678745 496 - 149719773 TCCGTTTTGGCT------CCAGCCTCCT--------------------GCTAGGCAGAAGCCTGGTCCTTTAAACTTCACAGATTCAAAGTACTGTGGGATTGC-CTGAAATCTCAATTCCCTGGCAC-------------------TATGCCTCTT-TGGACTTACTTCAGCCACATCTGGA--------TTGCCGCTGCTGCAGCAGACAGAGCACCCTACCAACAGGCTGTGGGAACAGGTTTTCTGCTGTGCTGAAGCTGGTGACAAATTGA-----------------CAGAGTATGACCTGTTCATTGGCGGCAGGGCCACTTGTGGTCCAATTGCCTCCAAGATTAAACTTCCCCCAGGCGACATGTACAGCACCAGGAAGAGTGGCAGGCAGCCTGGTTCAGGATTACTAACAACTGTGTGGAATTGA-TCTGATTTTAAAGTGCATGGGTTTTGGAATTGTCAGGCTCTATAAGAAAATGAAATCCTTTGTGCCAGCTCTGGTCCTGCTGG-TCTGTGAGCGGTGGACACACTCGTGTGCGTGCCAATGCATGTGTGT-TGT s rn2.chr12 21110141 501 + 46874691 TCTGTCTTGGCT------CCAGTCTCCT--------------------GCTAGTCAGAAGCCTGGTCCTTTAAACTTCATAGACTCCAAGTACAGTGAGAATGC-CTGAAA-CTCACTTCCTGACAAA-------------------CATGCCTCTCCTGGATTTACTTCAGCCACATCTGGAAAGCAGGACTGTTGCTGCTGCTCCAGATGGAGCACCCTACCAACAGAGTGTGGGAACAGGTTTTCTGCTGTTCTGAAGCTGGTGACAAATTGA-----------------CAGAGTGTGACCTGTTCATCGGCAGCAGGGCCACTTGTGGTCCAATTGCCTCTAAGATTAAACTTCCCCCAGGCGACATGTACAGCACCAGGAAGAGTGGCAGGCAGCCTGGTTCAGGGTTACTAACAACTGTGTGGAATTGG-TCTGCTTTTAAAGTGTATGGGTTTTGGAGTTCTCAGGCTGTGTAAGAAAATGAAATCCTTTGTGCCAGCTCTGGTCCTGCTGGCTGTGTGAGTGGTGGACG-ACGCACATGCGTGCCAGTGCACGTG----TGT a score=30678.000000 s hg15.chr7_random 857044 173 + 1057565 AGAGAGACCCTAGTTT-AGCTCTTTTGGAAAGCAACTGCCCTGCATTA----------------GGCTTGTTTCTGGATGCTAGCACTAAAATAGCAATCAGACTCTGC-----ATGCCTCTCACAGGCAACTTGTCCACAAAACCACTTCCAAATGTTTTCCC-AAGTGCATGTGTCTGACCCAGG----CTTCTTTCT s mm3.chr5 15679241 199 - 149719773 AGAGAGTTCCTATTTTGAGCTGTTTGAGAAAGCAGCTGCCCTGAATTGAGGCGCATGTGTCTTCAGCTTATTTCCCGATGTTAGC-CTAAAATAGAAACCGGCCTCTGTCGGCAGTGGCTCTCCCGGGCAACTTGTCAGCAAAAGCACTTCCAAGTGTTTCCCTATAGTCTATGCCTTTGACGGAGAGCGCCTTCTTTCT s rn2.chr12 21110642 198 + 46874691 GTAGAGTTCCTATTTTGAGCTGTTTGGGAAAGCAGCTGCCCTGAATTGAGGCGCATGTGTCTTCAGCTTATTTCCCGATGTTAGCACTAAAATAGAAACCGGCCTCTGTCGGCACTGGCTCTCCCGGGCAACTTGTCAGCAAAAGCACTTCCAAGTGTTTCCC--CAGTCTATGCCTTTGACGGAGAGCGCCTTCCTTCT a score=16751.000000 s hg15.chr7_random 858022 99 + 1057565 AGCCCTAATTAA--CCCAGGCTGACTTACAATTCCTCCCTCTCTTAACCAAAATTATGTTGAATTTTTGTGTTCCTTGTCTTTTAACTGAAAAGCTCTTGt s mm3.chr5 15679765 100 - 149719773 AGCTTTAGTGAAGCCCCAGGCTATCTGGC-CTTCCTCTCCAGCTTGAATACAGTCATGTTTAATGTTTGTGTTATTTGCCTTTTAACTGAGTCACTCTTGT s rn2.chr12 21111165 100 + 46874691 AGCTTTAGTGAACCCCCAGGCTGTCTGGC-CTTCCTCTCCAGCTTGAACACAATCATGTTTAATGTTTGTGTTCTTTGCCTTTTAACTGAGTCACTCTTGT a score=6121.000000 s hg15.chr7_random 864378 54 + 1057565 atggaAGTCATATGCGTCATTCCA-AGTCTTTGCTATTCTTCGAAAAGTAATCAT s mm3.chr5 15688401 53 - 149719773 aTATAAGCCACTCACTTGATTTAACAGTGTTTGCTGTTGATTGAAAA--AATAAT s rn2.chr12 21121364 53 + 46874691 ATATAAGACACCCACTTGATTTAACAGTATTTGCTGTTAGttgaaaa--aattat a score=38758.000000 s hg15.chr7_random 864523 399 + 1057565 tatattgactacctaatatgtgattgtattg-----ctttagtagaat--tctctaataagtactcccatggtgtcagaatccacattgtttctagattt-ctctgttctaaacacatgctgaacattcttgtgaataaatctctgcctacatctctgattattcttatggatagactcctgaaagtATGAAGAGGA----AGGATTCATCTGCATTCTGAT-TTTAAATAGCCCATTTGTCTAAATGTTAGTAGGGCCTAAGATCTGGAATAAATGACACAGTGG----------CAAAAGTCAGAGTCACCCCTCCTGGTTGGTT--TCAGAGAGTCCTGGGCTGAAATGG---TGCCTTTGGGATC---CATCCCTGTCTAGCACA------GGAGTCCCCTTTGCAGCAGTGTCCATAAAAATATAGCTTGg s mm3.chr5 15688454 401 - 149719773 TTCATCAAATTCCAAATATACCACTGTACTGTACTGCAAAACTAGCTTGGTCTTCAGTAAGTAATTCCACTGT---AGAATCTTAACTGCTTCTAGTTTCCCCCTACCTTAAACATTGCCTAATGATTCTTGTGCATAAAT-TATTCTTACATTTCTGCTTAGTCTTATGAAGAGATTCCTAGAAACAAAAATCTAAGCCTGGGGTTAATCTGCACTCT----TTTAAATA-CTCATTTGTTTGGATGTTAGCAAGGCTGGAGGACCTAAATAAATCATACAGGGGGTATGTCTGATGAGAGGAGGAGTCA--CTTCCTGATTGGTTCCTGAAACAACCCTGGGTGGGTTT-----TGTTGTTGTTATT----------GTTTTGTTT-------TAAGGAACCTTTAGAGCC-TGTTCCTT-GAGTAGCATATGG s rn2.chr12 21121417 423 + 46874691 ttcatcaatttccaaatatcccactgtattg-----caaagctagcatggtcttcagtaagtaattccactgt---agaatctaaactgtttctagttttcccctgccctaa-ctttgcttaatgattgttgagcataaat-tattcttacatctctgcttagtcttaggaagagattcctagaaccaaaaatgtaagccaggggttaATCTGCATTCTAACTTTTAAATC-CCCATTTCTTTGGATGTTAGCAGGGCTAGGGGTCCTAAATAAATTATACAGGGG-CATGTCTGATGAGAGGAGGAGTCATACTTTCTGGTTGGTTCCTCAAACAACCCTGGTTGGGTttgttattgttgttgttattttggttttttgttttgtttctttttttAAGGCACCTTTAGAGCC-TGTCCCTTTGCATAGTATATGG a score=20207.000000 s hg15.chr7_random 865219 254 + 1057565 GTTAGCTTGG-TGATGAGTCTGGGAAGAGAATCTCTTTattcattcattcaatctgcaagtattcactgagggtctgccctgaacctagcaccatccatggccccaggaatagaatggagaaaagtacaTCTCCTTAAGTGTCTCCTAGAAATGGAGACC----TCACCACTCTcgctaagacat--agctctctgaaggcagggactgtgactgtctcattcactgctCATAGTAAACGCTCAAATGGTTTTTGAATAAA s mm3.chr5 15688855 206 - 149719773 ACCAACTTTGCTAGGCAGTCTGGGAAGAGCA--TCTTTGCTCATTCACCCAG--------------------------------------------CATATTCCTTGAACTAAATCAGCAAAGAG-------CCCCCAGAGTCTGCCAGACACCTTAACCTGGGTCTTCATTCTTACTAAGACATGAGGAGCTTGAGGAGAAGGGACCAGTAC--TCTCAGTCGGTGCTCATTGTGAACACTCAAATGGTCTCTGAAGGAA s rn2.chr12 21121840 204 + 46874691 GTCTGTTTTACTAGTCAGTCTGGGAATAGCA--TCTTTGCTCATTCACCCAG--------------------------------------------CATATTCCTTGAACTAAATCATCAAAGAG-------CCCC-AAAGTCTGCCAG-CACCTTAACCTGGGTCTTTGTTCTTACTAAGAGGTGAGGCACTTGGGGAGAAGGGACCAGGAC--TCTCAGTCAGTGCTCATAGTGAACACTCAAATGATCTCTGAAGAAA a score=4791.000000 s hg15.chr7_random 866214 93 + 1057565 AGAGGTTTTGACATGAGCAGTTACTGAGAAAGGGATCTGGAAGAGTATTTTGAAATCAGACATAAAGTCAAATTAGACTTATTTAAGAGAATT s mm3.chr5 15689100 71 - 149719773 AGGAGTGTAGATATGACCAGCTATTTGGAAAGTGGCCCAGAAGA--AGTCTGGAG------------------TAGTTCTACT--GGTGAAGT s rn2.chr12 21122114 69 + 46874691 AGAAGTTTAGATATGACCAGCTAGTTGGAAAGTGGCCCAGAAG-----TCCGGAG---------------AAGTAGTTCTATT--GGT--AGT a score=130839.000000 s hg15.chr7_random 867483 915 + 1057565 TCATCA------------------------TCAGACA---AGTCTTGCACATTCCCTGTTGCTTGGGAACTCAAGAGGTCCCTGCCTGTGGCTTCAGGGTATCCCCTCGCTGCTTCCCAGCAGGCACCCTGTATTGAAACCCCACACCCTCATCTCAGCTCCCGATACTGCCAGTCCCCCAAAACCAGCCCTTCCCATTGTGGAGTTATACCAGG-CACCACGTGAAAGCCACAGCATCAGCATTGGAGACTTTCTGCCAGGACACAGAACGTGTCTTAAATAGCACAAAGACATTTAAATGGGAAGAAATTACAGCAGGAGTGAGTTTATCCCTTTCAAGATACTCTTATTTAATAACCAAAAAACTCACATCGATGTTCATTTTATCCAACTACAAAAACAGCATGGTGGGTTATATATTGTGGTAACTACATGTTTGGGGTTTTATTCCTCCTTTAAACCAGATTTCTATTATTTCAGAAAATCAGCCATTGTAGAAAAAGACTATTCATTTATTTCATTTCTGGGTGGCCCATACACTGTAAAAATAGGTCAAGAACAGTAATCTAAATTGACTGCTGATAAATAATTAAAGCTAATAGAATTTTTCTCAGACCTGTGAACTAAAATCTTTGAGAAATTGCCAGGACATACTTACTGTCTCCTGTTGTATAGAAA--GATATTTTTTTATTTAATACTTCAGTTTCAATGCCATTTAAAATTACCATTTTCTATCACAAGGACTGGAAGGAATATGTGTTCATCTATAAAAGTAACCAGAGGAACGACGCCGCACTGATGGCTATATGGTACATCTTCA---GATGAGATGGGAAGTGACGGTTTCGGTATCCTGGACAAAA--GAAACTTCGTTTTTCACTGAACTGCATTTTAAGTCGAGGTCTACAGTCTGCATATCACATAATATATACTGTCTTGTTTTTA s mm3.chr5 15690196 858 - 149719773 ------------------------------TCAGGCAGGGTGTGTGGCAACGCTGTTGTTACTCGGGAACTC--AGTGTCACTGCC-----CTTTATG----TCCCTCGCTGACTTTTACCACTTACCC---ACTAGAG-CCCACACCTT--------CTCCAGTCACTGTTCGGCTCTAGGAAGCTGACCCTGCCATCACCCAGTGTTGTTGGA-TAGTGC-TGT-AGGCACCTCAATCACATTCAAGACGTTCTACCAGGACACAGGA--TGCTTTAAATGGAGCAAAGAAATTTAAATGGAAAGAAATTATAGCATGAGTGAGTTTCTCCTTTTCAAGATAATCTTATTTAATAACC-AAAACCTCACAAAGATGTACATTTTATCCCCAGACAAAGGCAATGTGGCAGGGTCTGCATCATGGTAATTACATGTTTGGGTTTTCATTCTTTCTTTAAAGTAGGCTTCTATTATTTCAG-----------TTTAGGAAAAAGACTATTCATCTATTCCATTGCTGTGTGGCCCATCCACTGTGAAAATAGGTCAAGAACCGTAATCTAACTCGACTGCTGATAAATAATTAAAGCTAATGGAATTTTT-GCAAATCTGTGAACTAAATTCTCTGAGATGCTGCCAGGCCATACTGGATG----CTGTTGTATGGAGA-----GATTTTTTATTTAACACCCCAGTTTAAATG-CATTTAAAACCACTCCTCCATCTCACAGAGACTGGAAAGGGTATGTGTTCATCTATAAAAGCAGCCGAAAGCTTGAAACCCCGTCAATAGCCATGCCATTCACCTTCAGATGATGAGATGAGAGGTGAAAGGTCCTGCATCCTGGGACAAAGGGAAACTTCCCTTTCTACC-AACCTCTCTTTAACTTGAACTCTGCAATCGAAGTATCAAGAACCTCACAC----------CTG s rn2.chr12 21123263 888 + 46874691 GGCTTGTGAATTGGACACAAATGACCTTTGTCAGGCAGGGAGTGTGGCAGAGCTGCTGTTGCTCGGGAACTT--GGTGTCACTGTC-----CTTTTTG----TCCCTCGCTGACTTTAGCCACTTACCC---ACTGGAG-CCCACACCT-----------CCAGTCACTGTGTGGCTCTCGGAAGCTGGCCCTCCTCTCACCCAGTGTCGTTGGGGCAGTGC-TGC--GGCACCTCAGTCACATTGGAGACATTCTACCAGGACACAGGA--TGCTTTAAATGGAGCAAAGAAATGGAAATGGAAAGAAATTATAGCATGAGTGAGTTTCTCCTTTTCAAGATAATCTTATTTAATAACC-AAAACCTC-CAAAGATGTACATTTTATCCCCAGACAAAGGCAATGTGGCAGGGTCTGCATCATGGTAATTACATGTTTGGGTTTTCTTTCCTTCTTTAAAGTAGGTTTCTTTTATTTCAG-----------TTTAGGAAAAAGACTATTCATCTATTCCATCGCTGGGTGGCCCATCCACTATGAAAATAGGTCAAGAACCGTAATCTAACTCGACTGCTGATAAATAATTAAAGCTAATGGAATTTTT-GCAAATCTGTGAACTAAATTCTCTGAGACGCTGCCAGGCCATACTGGATG----CTGTTGTATAGAGATTTTTTTTTTTTTATTTAACACCCCAGTTTAAATG-CATTTAAAACCACTCCTCCATCTCCCAGAGACTGGAGAGGGCATGTGTTCATCTATAAAAGCAGCCAAAAGCTTGAAA-CCTGTCAATAGCCACGCCATTCACCTTCAGATGATGAGATGAGAGGTGAAAGGTCCTGCATCCTGGAACAAAGGGAAACTTCCCTTCCCACC-AACCTCTCTTTAACTTGAACTCCGCAATCGAAGTACCAAGAACCTCACAC----------CTG a score=9523.000000 s hg15.chr7_random 868398 73 + 1057565 AAGACTCTGTACTTGGTCTAAGCTCTT----ACATTGATAAGGG-AAACTTACAGCTATCTTACATGACATCCAGGAA s mm3.chr5 15691304 77 - 149719773 cAGGCTTCATACCTGGTCTGGGTTCTTTGCCCTGTTCATAAAGGAGGAGTCACAGGTGCCATAAATGACA-CCAGGAA s rn2.chr12 21124367 74 + 46874691 caggcttcacacctggtctGGGTTCTTTG--CTGTTAGTGAAGG-GGAATCACAGGTGCCATACATGACA-CCAGGAA a score=20035.000000 s hg15.chr7_random 869916 248 + 1057565 TTTAAGtc---tctgactct------------gagcctcctgcccttctcttacaaggagcactaggattacaccgggcccgcctggataatccaggatcatctc-ctgactcatgatccctaatgtagtcccatctgcaaaagccccttttaccattgcaatctaacgtattcacaagtgccagctatgaggatgtggttatctctggaaaactattattGGTGCTGACCAGAGATAGCCTTATTTATATAAAAAGAGATTGG s mm3.chr5 15698399 237 - 149719773 tttgagtcccctctgactctctctctcttgtatggactcctgtgtttctact----tgggcagtctgatgacattagccccacgtacatggtccaggatcctctctcagacccacgattgttaatgtaatcatagctgcaatg--tccctttactgtgtcaa-gtcatgtatttacaggtctca-------------ggatatcgttag--ggctattagt-----cttctacAGGTAGCAATGTTTGTGGGGGTGGAGGAGGG s rn2.chr12 21131911 229 + 46874691 tttgagtcctttctaattctctct----tatatggactcctgtgtttctgct----tggacagtctgatgtcattagccttacctacatggcccaggatcctctccctgacccacaattgttagtataatcacagctgcaatg--tccttttactgtgtcaa-ctcatgtattcacaggtctca-------------ggacatccttgg-aggCTAATAG------CTTCTACAGGTTGCAATGTTTGTGGGAG----GGTAAA a score=19446.000000 s hg15.chr7_random 870454 142 + 1057565 CAGATTGGTAAAGAATCTGATGACTTTTTGTCATTTAACTTGGTGTAAAAATACAGAAAATCATCTAGTGGAGGAAGTAAAAGGACTGACTTCCCCAAGGAAATAATGGTATCACATTTAGAAATG-CATCATTTAGAACAGT s mm3.chr5 15698636 138 - 149719773 AAGCCCGTGAATTCATCTCCTTGCTTTTTGTCATTGAACTTAGTGTAGAAACGTAGCAAATCATCCAGTGGAGGAGCAGAAACTGTTGGCTTCTCCCAAAGA-----GGTGATACACCTATGAAGGACAGCCCTTAGGAAACT s rn2.chr12 21132140 138 + 46874691 AAGTCCATGAATGCATCTCATTGCTTTTTATCATTGAACTTAGTGTAGAAATGTAGTGAATCATCCAGTGGAGGAGCAAAAACTATTGGCTTCTCCAAAGGA-----GGTGACACACCTATGAATGACAGCCCTTAGGAAACT a score=29645.000000 s hg15.chr7_random 872818 210 + 1057565 GCTTTAGATAATGATAAACAGCACTGACTGCCACGCTGTTTTTAGGAGGTCTTAACCAATGTTTCCCTTCTTTCTCCTTCTCAAATGGCTGCTTCCTGACCTCCGCCTCCTGCTCCAGGATTTGCGCAAGCAGGTAGCACCACTGCTGAAGAGCTTCCA--TGGAGGTAAGCTTTTCTATTCATTT-TCTATCCTGA-GCCACCCTTTGTGGCT s mm3.chr5 15699086 198 - 149719773 GCTTTTTGTGGTGATGATCTGCACAGA--GCC------TTTGTAGGAAA-CCTAACCAATGTTGTTCTTCTTTTTCCTCC---AATGGCTGTGTCCTGACCTCTGTTCC---ACCCAGGATTTACGCAAGCAGGTAGCACCACTGCTAAAGAGCTTCCAAGGGGAGGTGAGTACACGTGCATGTTC-TTTATCCTCATGCCACTGTCTGTTGCT s rn2.chr12 21132594 199 + 46874691 GCTTTCTGTAGTGATAATCTGTACAGA--GCC------TTTGTAGGAAG-CCTAACCAGTATCCCTCTTCTCTTTCCTCC---AATGGCTGTTTCCTGACGTCTGCTCC---ACCCAGGATTTACGCAAGCAGGTAGCACCACTGCTCAAGAGCTTCCAAGGGGAGGTGAGTACGCATGCACGTTCACTTGTCCTCATCCCACGCTTTGTTGCt a score=36235.000000 s hg15.chr7_random 876252 232 + 1057565 aaaATTTGAGatattataatt-taatgattacttataattattataaCAAAATCATAAAATGCAACTCACACAGAAATTAGAGCTATTTATGATCAGTTGATTGATTATGATACCTAATTTTGGGTGTTTCACAAGCCCAACAAATTGATGGGTGGTGTGGAGGAGGTGTACCCTTAATATTCAGTCCAATTTAAAGCTTATTCTAGTCCAACAATAATTTAGACAATCCATT s mm3.chr5 15699678 210 - 149719773 AAAGTTTGAAATTTTATAATCATAACGATTACATGTAATTATTATGGCAAAGCCATCAAATTTAACTCACGTTAAAATTGGA---------------TTGATTGATTGCTGTACTTAATTTT--CTGTTTCACAAGCCCAGACAATTAATTGG------GAACGGGAATTAACCTCAGTGTTCAATCCAACTTGAAACATGTTCTACTCCAACAGTAATTTAAACAATCCCTT s rn2.chr12 21133166 210 + 46874691 AAAGTTTGAAATTTTATAATCATAACGATTACATGTAATTATTATGGCAAAGTCATCAAACTTAACTCACGTTGAAATTGGA---------------TTGATTGATTGCTGTACTTAATTTT--CTGTTTCACAAGCCCAGACAATTAATTGG------GAGCGGGAGTTAACCTCAGTGTTCAATCCAACTTGGAGCATGTTCTACACCAACAGAAATGTAAACAATCCCTC a score=11727.000000 s hg15.chr7_random 876619 63 + 1057565 GTAGTAGGGGAGAAAGTGTCCTCAGAGAAGAAAATCCTCTTAAGAAATAACATGAGTACTCAG s mm3.chr1 137809901 63 + 195869683 GTGGAAAGGGATAAAGTGTTCTCAGAGAGGAGAATTCTCTTAAGGAAAAATAGGATGACTCAG s rn2.chr13 99197579 63 + 105800825 GTGGAAAAGGACAAAGTGTTTTCAGAGAGGTAAATTCTCTTAAGGAAAGACAGGATGACTCAA a score=27834.000000 s hg15.chr7_random 938515 350 + 1057565 ttctccaagttgcacagctagtaagcaccttagccagatatccaacccaagtgtgcctgcttccaaaaagcctgtactctGGTTTTGGGTCGGGCTGGGACCAAACCTTCACTACCCATATAGCCTCCCGCCTCCCCAACCAGAATAGGTGGGGTGGAGAGTTTCACCCCAACTAGCAGTCTCACTGCCAAGGAACTTGAAAGC----------CATAGCGC-----CCAGGAACCTGTTCACAGAAGCCACCATTTCCTGGGCTCCCAAGGTAGCCCCAGGGAAGGGGGAAAGACTTACAC-ACCTTGGAACTTCTGGGGGGCTTCTCAGAACCTTTCCTTTCTGAACCAGAGCTCACAAATCTT s mm3.chr5 15829554 300 - 149719773 ttatctaagctg--cagctAGTAAATGGCAACGCCAAATCTCAAACCC-ATCATACTTGCATCCTA----TTTGTA----AGACTTAG------------------CTTAGCTACCCACCTAACCTGCCACCTGCT------GACTGGGTAGAGCAGAG---------CTCGGTGCCTACCTTGCTGCCATGAGGCTCGAAAACAGA--TTGTGAGCAGAGCCAGCACCAGGGGCTGGT---------CCTCTAATTCTCAAGTTCCTGAAGCTACCCAAGGAAAG---------CTGATGCAACCTGGGTATTTCT--GGGACCTATCAGAACCTCACTTTTCTGAATCACAGCTTTAAAACCTT s rn2.chr12 21264191 301 + 46874691 TTATCTAAGCTG--TAGCTAACAAATGGCACCTCCAAATCTCAAACCC-GTCATACGTGCATCCTA----TTTGTA----AGCCTTAG------------------CTTAGCTACCCACCTGACCTGCCATCTCCC------ACCTGGGCAGAGCAGAG---------CTGGGTGCCTACCTTGCTGCTGTGAGGCTTGAAAACAGCGTTTTCACACAGAGCCAGCACCAGGGACTAGT---------CCTCCAGTTCTCACGTGACTGAAGCCACCCAAGGGAAG---------CTGATGT-GCTGGGGTATTTCT--GGGACCTATCAGAACCTCACTTCTCTGAATCACAGCTTCAAAATCTT a score=69284.000000 s hg15.chr7_random 940811 399 + 1057565 GGCTGGGGTAGCACCAGAGGCCCTTTCCCCAGCAGCACCCCCCTCAC-GTCCCCGCCGCTTGTTGTCTTGTAGGTCTCGGATCCGCAGAGAACTGTTCATTGAGGAAATTCAGGCCGGGAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGCCCGCAGCGGCCGGGCGGCGCCCAGCTCGGAGGGCGACAGCTGCGACGGCGTGGAGGCCACT------GAGGGCCCAGGCAGCGCCGACACCGAGGAGCCCAAGTCTCAGGGAGA------------------------GGCCGAGCGGGAGGAGGTGCCGCGGCCGGCGGAGCAGACGGAGCCGCCGCC------CTCGGGGACCCCGGGCCCGGACGACGCCCGCGACGACGACC--ACGAG----------GGAGGCCCCGTGGAAGGCCCGGGGCCCCTGCCCAGCCc s mm3.chr5 15832195 432 - 149719773 GGCAGGGGTGAGGCCAGG---CCTGTGCACAGGAA------CCTCAC---AGCCTCCACTTG-TGTCTCACAGGTCTCGGATCCGCAGAGAACTGTTCATTGAGGAGATTCAAGCTGGAAGCCAGGGCCAGGCTGGTGCCAGCGACTCACCTTCAGCTCGAAGTAGCCGCGCTGCACCCAGCTCGGAAGGTGACAGCTGTGACGGCGTGGAAGCCACCGACGCCGAGGAGCCAGGTGG---CAACATAGTGGCCACCAAGTCTCAGGGAGGGCTGGCAGAGGTGGCCGCAGCCCCGGCAGACCGGGAAGAAGCGACGCAGCCGGCGGAGAAGGCGAAGGCACAGCCACTATGCTCGGGGACCCCAGGACAGGACGACGGTGAAGACGCAAGCCGGACTAGGCCACTTTCCGAGGGCCTCGCCGACGCCCCAGCGCCTGTGCCAAGCCT s rn2.chr12 21267072 435 + 46874691 GGCAGGGGTGAGGCCAAG---CCCATGCACAGGAA------CCTCACCACAGCCTTTGCTTG-TGTCTCACAGGTCTCGGATCCGCAGAGAACTGTTCATTGAGGAGATTCAAGCCGGAAGCCAGGGCCAGGCCGGTGCCAGCGACTCACCTTCAGCTCGAAGTAGCCGGGCTGCACCCAGCTCTGAAGGCGACAGTTGTGACGGCGTGGAAGCCGCTGACACCGAGGAGCCAGGTGG---CAACATAGTGGCCACCAAGTCTCAGGGAGGGCCGGCAGAGGTGACCGCAGCCCCGGCAGACCGGGAAGAAGCGACGCAGCCGGCCGAGAAGGCGAAGGCACAGCCACTATCCTCGGGGACCCCAGGACAAGACGACGGTGAAGACGCAGGCCGGTCTAGGCCACCTCCTGAGGGTCTTGCTGACGCCCCAGCGCCCGTGCCAAACCT a score=1279069.000000 s hg15.chr7_random 941210 9874 + 1057565 cgcctccgcgaccgccaccgccgcgcccgcggcccccgaggacgccgctacctcagccgccgcc---------------------------gcgccgGGGGAGGGCCCCGCGGCCCCGAGCTCCGCGCCACCGCCCAGCAACAGCAGCAGCAGCAGCGCCCCC---CGCAGGCCCAGCTCGCTGCAGAGCCTTTTCGGCCTCCCCGAGGCCGCGGGCGCCCGGGACTCGCGCGACAACCCCCTGCGCAAGAAGAAGGCCGCGAACTTGAACAGCATCATCCACCGCCTGGAGAAGGCCGCCAGCCGGGAGGAACCTATCGAATGGGAGTTCTGAGGGGCTGCGGCCCTGGGGCGGGCAGCCAGGCTGGGCCGCAAGGGCCTGGACGGGGTCGGACGGGGCAGGCGCTGCGACACCGTGGCCTGGGCTTGGCCCGCGGCCTGCACCGACCCCGGGCCGGACCTGAGCCCGCAGCCCAGACCCCCTCCACGGTCCGCGGCCTGCACCGACCCGAGGCCCAGATCCAAGGCCGCGGCCCAGACCCAC-TCTG-CGGCCCGGGCCGACCCTGCGGCCTCCACCAACCCCGCGGCCCAGACCCAGCCCGCGGCCTGGACCCCTGGACCGCTTTGCGCACTTACCGCCCTGCGGGCCACAGGGCAAAATCGCCATAGGCCAAGGTGCATATAGAAAACAAAGGAGCATTAAGCCCAATCTATGTCGTGTTTTCAAGGAAGAAAACGGAAATGTGTGGTCGAGCTTTTTTGTACCCTGAAGTGTTTTTTTT---------ATTGCCCTAAGTGATTTCCACAGGTTCTGGAATAACTC-TTACAGC-TTTGCCTTGTGTCCTCTTGTTCCGTGTGGGCTTTAAAAGAAAAAAAA-TCAAACCCACATATTAAAAGGGGGCTTTTTATCTGCCATCTAATGGCTTCAGAGCGATAATACACTATTATCTTCTTAAACCAGGAAAAAATAAAAGGGGGGGTGGGATTTTTCAGAAAAATTAAAAAA-GAAAGTTTTTGTAGCTGTTCAGTTGCCACTAAGAGATTGCACAGTCAAAACGACTCTAAACACACTAGTTTGGATTCCTAAATATTTTCAAGAAAAGAATCTTCTCGTTTGAAACTTTGAATTAAAATAAAACACATTTACTCCACATATTTTTTAACAAAAAGA------------AAACGTCACATCAGGAAA---CTCTGATTTTGTGGTAGCTGACATAGTGTTTTCTTGTACGTGAATAGAATCCTGACATGTAGTGCACATTGATGTATAGCTTTAACTGACCCTGGG-TTTTGCAGACCAGGGTTTGTTTAATACACTCCATTCTAGGCCAAATCAGGACaaaaaaaagaaaaaaaaagaaaaaaaaaaaagaaaaGATCCGAATCTAGGTATTTTATAATCTGCTTTTTAACCTCTAACCGCAGAGCACGCTGATCAGACCTCATATCTTGGAGGTTTAGGAGACAAGTTAGAACTGTAGCATGTACCTGTTAATTTTGTTTAATTTATGGTGTCTCAATCTGTCT--GTGCGTCTGCACGTGTGCAAGCATTGAAAGAAAGGAGAGAGTAGTCCGGGCGAGCACAGCAGGCAGTTCCAGGGCCAGACGGGCCCATCCCCAAGTAGATAGCAGTCTACGGATCTCTCTCTGGCACAGAAGGCACCTCACCTCACACCACTCTCCTGGATACCTGATGAACTGAGC------CCTCCCAGGGGAAGACACTCCCCAGGCCTGGGCAGGGCT----------TACACGCGCACTCTC------TCTCTTCTTTCCCTTTTTCTTCCCACCGCAAGCACTGATGACCCTGTTGAACTCGTGGGAAACTTCCTTTCTCTGCAGGAGAGAGAACGTGGCATTCTGGGCTCCCCACTCCCATCCCTGTAGAAATGGCCCAAACTCACACCAAAACGTGGATGCTCTTCAACTTCCAAACCTACCATTTGCCCTTCTTTCATTTCGCCTCTTA----GTTCTTTTTATGCACAGTTTTAGGGCAGTCTAAGTACAAACTGAAAGTCTAACTTGTCTC-TGATTCCTCCC-TTGTCTATGTGTATATGCGTGAGAATAGAGGCGGGTGAGAGTGTGCGTGCGTGTGCGTGTGTGCAATTTTATACGTCTGTGTATTTTCTTAAGTACCTGTGCACACGTAGAGTGCATTACTGCCACCTTTTTCAATAAGCTGTTTTATCAGTTACGGCTTCTACAAG-TTTGCTAATTTAGACTTCTTTATTGCCATATCTTTAAACTAACAATAGATGATTTCGGtatatatatatatttttttttGCTTATTTATAGGTGCTGTATTTTATTATCTGATTGTTAGGAAGGGATGAAAGGGGCAAATATTCTTTAGAGGGATAGACTGCCGGCAGTATTGGGTATAATTTACAAGATGTAGTTGTCATACTGTATATTACTGATTGAAAACTTTTTGACCGTATTGTGTATCATTGAAACCTTTGTCTTAGGTCAACATCTTTGGATGACATTTTAATGGTGCATTCATTATTTCTTAAGt----ttaattaatattacttttttttttatttGGG-GGGTGGGAGGGAGTTATAATTTTAAAGGTATGCTCTGGCTGTTCCACCTCCGTGTGCTTGTTA---ATTAACTTGTAGGACTTTGACTGTAAGATGTGAAACCACGTTTCTTGCATGATGTTTTAGAGATTA-----TTTCATTTACAGTCTTTTAACCTGCAGCTGC-AGCACTTAGTTCACGTTTTCACAAATTTCAAGAGTCACTACACTAAAGACAATGCCTTTTCATGAATAAGAAGTTTTCAGAAGGCTCTAGGGGGCTGGGAGGCAGGCTGTT-CGTTTGTCTTTTGTTGGGGGTATCATTTCTGAACTTGAAAT-CCAGTTCAGGGAGAAGAGAATTCAAAATTAGAGGAGCTTAAGGGGAC---ACGGGTCAACATCTAGCTCGATTCAGGTGCATTGAGAAGAGTGAGTTCACATCGGTGA--CCCTTAGGACAGTGAGTGGCAGAGCCCTGACGACTGTGGTGTCCTCTCCACAAAACCCTCAAGGGACTTTTGTCATCATGTGTGATGAATCTTTAAATATCGTCTAATTTTCATAAGAATGAAAAG--AAGTTAACAGGAAATAGTAGGCTAGGGT-TTAGTTTTAAAGGCATGACTGTTATTT-ACAAAGGTGTTAAATCTGAGGAAATTGACAAATA-CAGATTTGTCCATTCTAGTGGCCAAACAGTAACAGTCTAAAATGCAGTCATTTTGACCCTCCCAAGCAATTTAGTCATATGTGTTGTTTTCTCTTTTCTGTTTTTACTTCTTAGATTTTTAACTAGGTTACTGTTGGTTCCCATTCTGTCTTTTTTGCCAGACTTACATCT-GGTGCCAGATACAATCAGTTGGTTAAA-TTTTGCTTGCAGTTCTGTGTATTTTTTTTCCT-----Ctattatttatttttttaaaaaa-----aataGAGATCCTAACCTTA-GATCTTTGATGTGAAGCTAGCACTGTCTGTAATACTTCTAAGAGCTGCCACTAAAATAATACAGCAATCCGTGGCCAGGGGAGCA---CCCCCTCCTGGTTGGGCCC----------CTCAGTTGGAGTCTAAGGGTTAATCTCTCATCTTGCTAAGCAGTATTCAAGTGCCTTGAACAGTGTCCCCTCGGCATGGCTCCCCTTCAGCAGGCTGGCATTCCAAGCAGTGGCCCCCGCAGGCAGCCGACCCCCTTCCTCTTCACGCTCTATGAGTTTAAAAAGCTGATTTGTACCTCTCCCCTGG-GGG---AAACGGTTCCATATAAAACACTAACACTTAATTACAAGCTCCATTATGCCATTTTAAATGGCTTCTTTTTGTTAATTGGAGGCATTGTTCATAACTTAAGGCTTTTGCCATTAACTTAGCTGGCTAAGCAGAGGCTTGGGGTAAAATCAGTGTTTGCATTTA-GCCTCTTG--ACCCGGAGTTCCGGCCCAAGCTCCCTTGTGATAGCCGAGATGGCAGGTGTGTGAGTTCTGTCCTAGACCTGTGCCCAACTCACTTCCACCCCAGAGGAGTCTTCTGTCCTCCTCCCCAACCCCCGAGCTCCCTGGTAACCTCCTCTTGAACTTCTGTATCAGTGAAGACATCTGTGGTTTCTGCTCACCAGACCTCTCTTTA----GAAAGGGTTA----TCAGAGCCATGGAGCTTAGCTCAATTGG--ATTCTTCTAG---ACGATCTTAGGAGGCATCTTGGCATGAGGCAGCTTCTAAGCGTCTCCTGGGACAGGATTGGGGTGACAGCCCAGGGATGCATGCGTGGGAGAACTCTCTGAGAAATGCCAGGATCGTGGCTCACAGGGACCCACCATCAAAACCTGCTACTTTGTGCAAGTAATTGAGGCAAAAGATACCAGTCGACAGCCTCCCTGGGGTAGATCCCTTGTACCTCCAAAGTACAAATACCTCCCTGCTCAGT----TTCCTTCCTGTCGCCATCTTTGTTTTCTTCCCATTGAAAAACCATCCTGTCTGATGTGGACGTTCAGGTCTGCTGGTTGGCGGTCCGGGCCCAGAGTGCAGCAGAGCTCTGGGTTAAATATTCCT--------TTCTGGCCA---------CCGCCCAAGCCCAGGTGGCCAGCTCTCATACCCCATCTCCCTCCTTGGCCAGGGCCAGCATCAGGCGTGCAGCTCATGACCAGTTTACACAGGCTGC-----------------AAAGAGAT-CGCTGTGGGCCTCGGCTGACTACTTTAAGATTATGCCACAGC-CAGGCCCTAAAAAGAGAGGGGAACAGGAGTCCCCAG-------GTGAGCTCTCTGACGGTCAGGTGCCTTCCC-GACTAAGGTTGGACTGGATGACTTTGTTCCTCCTGCA-TGCATGTCCTTTGATGCAAGGGTGATCAATGAACTCTGTTGACATTCTATGCAATGTTTTTCATTCCTCTGATTTTAGCAAAGCAAATCTTACTGAAAAATAGCAGAGCCAGGGGAACAGACGCATGTCCTTCTGGGAGTCACACAAAAGCAGAGAGATTTTGAACTGAGGGGCGACAGCCTTTGCCTTAAATGCAGTATGACAGGCGCTTCTTGGCAGACCAGTAAAAACAAAAGCCCATAGACCTTACTCATCCCAAGGCCGACAAGCCAGCTGTACAGGGCGAGATGTAG--CAACACGGGGCATGAGC----GGTGGGCGTGCTGGGCTATTTGCTGTGGTACTTTAGGCTGGAGGTTTGGCTCCTGTGCTGCCGGTGGGGGGCCCTGTCCCTCCCCAGATGTCCTCCCTCTTCTTCACACTCCTCATTG-TCCCTTCTACCTCACTAACCTGTGTTCTCCATCTGATGTCACCCAGAACCACACCCCACAGAACTGTGAGGCACGTGGGCTGGAG---------------AGAGCAG----AAAAGCTGCCAGCGCAGCAGACACGAACATCCCTCTGCCTGGTGGGCCGGCTTTGTGTGTCTCTCCTTTTGTGAGCGCAACACGGACAAACAGCTGTGCTCTGCAAGGCACACGGATGTTTCC-----CTTCCACCTGTTCCCAAAGCTCCAGCAGCTGTTTCTTTTGCAGGCAGGGCGTGGTCTCGGGGCTCCGAGGGTCTTGTCTTTGGTCCGCCTTCCTTTCTGTCCAGTCCTGCTCAGCTGTTAAGATCCATCATGGCCATTATCCTTGTCCCGGACTGCCCCAAAGT--TCCCAGCTGGCTTTGGGGAACACTGTAGCTCTTGGGTGTCTCTTGTCTCTGGCATGGTTTTAGCGTCACTGCGAACACTCCTTTGCAAACATCAAACATCTCAAAGACGGAAAAGGATAGATGGCTTCCTCCA---GCCTACACGCCCCGTCCACAGTGGCATCACCCTCTTATCCCAAAAGAATATGCCAGTTCCCATCCAGCACCGAAGAAAATCAGCTCCTGGGGCTGGTGGTTGGAGGTGGGTCTGTCCACTGTGGGGGCCAAA-GTGTTCCCCTGCTGGAGACAGTTTGCAAGTAAGAACCTAAGGA--------------TGGGGACAGCATCCTGTGCTTGGGCATTGACCAGCCAAAGCTCACATTTAGAAATCCCTCAGTGCTTCTGTGGTTTCACCTGGGCATCGACGACATTAGGGAAGCCTTTGTGACCACAAGGGCAGGGCTTGTGCCCTGAGTGGCGAGGTGGTGACCTGAGGCCAGTGTGATGTGGTTGGATCTC-------AGCGTGTACTGAATGCCAGTCTGGCCGGCACACTCGAACGCTAAGAGAATGGTCCAATTTGATGATCTTATTTCTAT---TTCGATCAGGTTTTGACTTTTTGTAGATGAAAACTACGAGGGAA-----AAGGGGAAGCAGGTACCCAATAAAGTTTAGAAAGATCCAGTCTGTGAAACCCTTAGAGATGGGCTGAAAGTTAAGTCCACCAACCCTTGGGCTTAATCAGGACGGAAGAGGAGGGGGTGTGGGGGGCAGAGCGTAAAACAAGCCCCAGCCTTACTCCCGGCCCCCCAGCCCAGTCTTCCCAATCCCAGAGGCCCCGGCGGCCTGTGCTCCTCACCACCCTGGTCAGGGGAATAGAAGGAAATGCAATTTCCGCCTG--TCTGCCCGACTTCCAAAAAATGCCTCTTCCTGCCCAGGCCTCTCCCACCACCACCTTCCCTCCAAAGATAACCGTGTCCATGCCATCCGTGGCATCATCTCGAGTTTTCATTTTTGGATGAAGTGACATTTAGCTTTAACAAGACATTTCCAAAGCGCCTAGTCTCCTCCAAAATGCTAACTTTAAAAGTTGGGCATTGTAGGCGAAAAATCCCaaaaaaaaaaaaaagacaaaaaaaaaaGGCTGGCGAGAGAAAGACATTTGGCTATGCATAAATGTGCACTTCCCCCATGCCCCCGTTCTTAAACTCTTAAGATGCCTTTGAGTTGCTTTTCATGAATCCTTTTAGTTTACCCGATAATGTTAAGAAAGCATTAGTCTACGTTACTGTAATTTCTGTAGTGTTTACGCTTTAATTTCTACCACAAAATATGCTATATGCTATGTATCAAGCTTTCTGTAATCAGAAAGAAAAGGTGCCTTATATCCCAATGTCACGGCTACATCCCTATGGAAATTA-ATCAGAAGCACAGTGTGTACGGAAGCATTGGGACTTCTGCTGGTGAAACAAGAGACCATTCAGCAAGACACATTGAAGT-----GGCACGGAGCTGCttttgttttataattcttttttc---------ccccc--------ttttccttcttcttttttattatttta----ttattttttttgtactttgctttAAACGGAAAGCACTTAAATAGATGACTATGTGTAAAAGCTCTGTGCAATTGAAATCA---------------------------------TTTTTCTTCATTTTAAAAAAATAACG-TATTGCACACCAAATGAACTCA-AAGTAAGCTTTAG-ACCAGGA-CGATTCAGGTTATGAATGAGTTTGTTCACTGTAGTTCCGTTTGTTCATGAACCGAAGGGAAAACAGGCCTCCCCGACTCCCTCCAGTCTCCCAGCCTGCCTCTTGGTGACCACTGTGCTGGGCGTGCAGGGCCCGCGGGCTCTGGCCGGAGCCGCTGGCCTGACGAGGCAGGATAGGGAGTATCCGTGATTCAGAAGCTGAGACCCTTCCCCAGTGTCTGAGGCCACAGCCATCCCTTCCAGCACTTAATCTTGTC-TTGTTGAAATGGACTGACTGCTACTGACCTGCCGGCGTGCGTGAGGGTGATTATAAAAGGATGTTTCCTTGAGAAAA--AAAAAATTATT----TCTATCCTCTTCT-ATTTATTATTAGGTTAATCATTTAAGTACTTATCAGGAGTGTATTGTTATTTTGTGTTTTGTTGTCATAAATGCTTTTTGCTGTCACTCTAGTGGTT-ACTATCCTCTGCCTTCCTCTCCTCCCCTACTC-CCCCAGAGAACCAAGGCGTCTGGGG---------GATTGAC-TGGGGGGCAGAGGGGGTTTCCCCAGCAAAATCAAACACCTGTCTCCAGAGTAGCCACTCAAAAACTGGTGGTCTCTATGTGTC-TAACTTTTTAAATGAGAGTGTTTATGAACAAAAAAATTTACCAACGTGTGAGGGAGTTGCTGAGTTGAAGAATGCTCGCTTGAGGAGCTTCA-------GAGGAATCTTAGCAAAGCCAAGTTCAG--TTCCCCAAAGCCTCCTAGAGCCTCTGGTAAGACTTCTGGGTTCATGAAGTTTCGGCGAGCCGTGGTCAG-AGAGGGCGCGGTGGCCTGGCCAAGACTTTACCTCCAAGCGAGAGAGTGATTTCTTCCAAGGCCCGCACGGGTTGATACG-TTTTGGTTGGTTTTTTGTT-GTTGTTTTTC-TTGCGTACAAAGTTGGTCAAAACCATCTTTCAAAGCAACA-GTGTTTTGTAGTACCAGGCTGTGGCTTGAGGG--CTCACCTAGGAGATCATAGGCAGA-GGGCCCCTTTCCCCTATAGGTGGTTCAACGTGGAGGAAGGTTGGGTGTGGAGATTGCTTGCTGTGGCCCCAAGCTCAGCCAGCAGGA--CACCCAGTTGTTGC-CAATCAGGTGTGAAGG----TGAGGC---GCCCTGCCTTGATCCCATGGGCCCAGC-------AGAAGGAAACTTACCCCAGGCCAAGGCAAGGGCCCTGCTCA-CCCCAAGGTAGGCTGGG-------------------AA---------GAGC----------ATCTCTTTCCATATCATCACCTCCCC-TTCTCCAAGATTGCCGGGGGCCCTGATTTTGTTC-TCTCTTTGAAAGAAACCCTCCACCGAAACAATGGTCCCCATCTCCCCAGAAGCCTTTTTTTTTTTCATTTTTCTCTAATTAGTCTATGCATTTCTCTCTCT--------CAAACCATCTTCTGCCTCTTC--------CCTTGAGAAAACGGGCATCTCACGTACCCCCATCTGAGACC--TCTTGGAAAAAAAAAATCCCGTGTATTCTGGAGATGTGAGAATTCACCC------------AAAATTCTTAAAACA-TTGGAGAATAGCTTGTTATAAAATAAAAGTGGGGGTAAAAAGAAG----GTGGTTTTCCCCACATCCCTTTGCATTGAATAAGAGACCTAGTTCTTTGCGTTTGTGCAATAACTCTTTGCTGCTTGCCTTGAGAGCGGGTAGCACCACGCTCCTGTCCAGACTACTA----ACAGCACAAGACGCACTCACAGGGTGGCGGAATCTTCCGGAAAACTCTCTATAAGCTCAGCTCCCCCCACCCCACCCCCACTCTAGCGTTTTGTCACGTCTTACATTTTAGCAGTATT---TTATATTTTCTGTAACGCACCAAGTCTTAGATCTTTCTAGAGCTTGTTTGTTCATCCTCACAATCACAGATTTTTTT------CTCCAATCCTCACAGAGACCCAATTGACCAAAAAAGAA-AAAAGGAAAAAAAAAAAGTCG---------------------TCTTTTTTTTTTTT------------------TTTTGTACAAATCGCTTTGAGATGCCTCTGGTGTGTTGCTGTGTGACATCT-CTCTGGTAACATTTTATTTCTTGCTATTTGTTTTTCTACATTAAGAGTCAAAGTTGACCTGGCTGGC------GTGGGGGTGGGGGAGGCACCCGTCGGCCCCTTGGTGTTGTCCCTCTGTCTTTGGTTAGCCATACG--ATGTTTGTTCTCAGCACTGTACAACGGTCCCTA-TATAATACGGAGAAGCAATATCACTGTATGAGACTCACACCATGTATTATTATTCACTAGCACCCTAGGTGTGATAATTGAAGTAAATATCTTTTATACAAACACAAGAATGTGTGGGTTGTTTTTATTTAAAG-TGCTCTGGCCTGAGGACGAGCAGCAAACACTGTCATTCGAGGTCCAAAGGGCACCTCAAGAATCGCCGTTCCCGAGGTCGTCCCCTTTGCACCTGTCCGCGGGTCCTCGGGCGTGTGGCTTCCGGGCACACAGAAAACCGTGTGGTTCTAGGATACATGGGGATCTCGGGCACTGCTCTGTCAATCTGCATCCGGTTCACaggaagggcttcgccagg-gcctgcgttcctacttgctgttgtcaccagcactgtttgccta-cccttgaaccaagcccttaccctccctggcgtccgcttccttttctgtaaa-atg--gagacaccatctcctgtcatataggcttgctgtgggg s mm3.chr5 15832727 9021 - 149719773 CGCCTGTGCCAG---CCTCGCCGCACCCGCGGCCGGAGAGGACGCCGCTACCTCAGCCACTGCCCCGGCCACGGCCACCGAGGCCCCCGGGGCGGCCAGGGCGGGCCCTGCCGAGAGGAGTTCTGCG---TTGCCAAGCACCAGCGCGCCTGCCAACGCGCCTGCGCGAAGGCCTAGCTCACTGCAGAGCCTCTTCGGTCTGCCCGAGGCCGCGGGCGCCCGG---------GACAACCTGGTGCGGAAGAAGAAGGCTGCGAACTTGAACAGCATCATCCACCGCCTGGAGAAGGCTGCCAGCCGGGAGGAGCCCATCGAATGGGAGTTCTGAGG------------GCgccgggcctccgggcctgaccagcagggcctcgccgggccttg---------------------------ccgggcctcgccgg---------------ccttgccaggccc----------------------------------acctgcgcctagcAGGTCCCCTGGGCCCAGTCAGC-------ACCGGC-AGTG-TGGGCTGGGGCTGGCGGGTG--------------TGCAGGGCTGTGCC-AGCCGAGGCCTGGA---------CGTGTTGCGCACTTAACGCCCTGCGGGCCACAGGGCAAAATCGCCATAGGCCAAGGTGCATATAGAAAACAAAGGAGCATTAAGCCCAATCTATGTCGTGTTTTCAAGGAAGAAAACGGAAATGTGTAGTCAAGCTTTTTTGTACCCTGAAGTGTTTTTTTTTTTTTTTAAATTGCCCTAAGTGATTTCCACAGGTTCTGGAATAACTCTTTACAGCTTTTGCCTTGTGCCCTCCTCTTTCGTGTGGGCTTTAAAAAAAAAAAAA-TCAAACCCACATATTAAAAGGGGGCTTTTTATCTGCCATCTAATGGCTTCAGAGCGATAATACACTATTATCTTCTTAAACCAGG---------AAGGGGGGG--GATTTTTTCAGAAAAATTAAAAAAAGAAAGTTTTTGTAGCTGTTCAGTTGCCACTAAGAGATTGCACAGTCAAACCGACTCTAAACACACTAGTTTGGATTCCTAAATATTTTCAAGAAAAGAATCTTCTCGTTTGAAACTTTGAATTAAAATAAAACACATTTACTCCACATATTTTTTAACAAAAAAA-GAAAAAAAAAGAAAAGTCACATCAGGAAAAGTATCTGATTTTGTGGTAGCTGATGTAGTGTTTTCTTGTACGTAACTAGAATCCTGACATGTAGTGCACATTGATCCATAGCTTTAACTGACTCTGGGCTTTTGCTGGCCAGAGTTTGTTTAATACACTCCATTCTAGGCCAAATCAGGACAAAAA---------------------------GAAAGATCCGAATCTAGGTATTTTATAATCTGCTTTTTAACCTCTAACCGCAGAGCACGCTGATCAGACCTCATATCTCGGAGGTTTAGGAGACAAGTTAGAACTGTAGCATGTACCGGTTCATTTTGTTTTATTTATGGTGTCT--GTCTGTGTTGGCACATCTGCGCATGTGCAAGCGTCGAACGGAAGGAAATGTAGGCCCGCAAGGTCGCAGCAGTTAGTCCCG------------------CACGTGCAGGCCACCGTCTGCTCATCTTTCCTTGGCACAGAAGGCACCTCACCTCATGCCACTCTCCAGGGCACCTGACAGACTGAGCCCCCCACCCCCCAGGGGAAGATGTTCCCTATGCTCGGGCAGGGCTGGCGCAGCTCTGCGTGCACACTCTCTTCCTTTCTCTTCTCATCCCCTTCCTTCCCACCACAAGCACTGATAACCCTA-TGTACTCGTGGGAAGCTTCCTTTC-CTGCAGAAGAGAGAACGCTGCAGTCTGGGCT--CTATTCCCATCCCTGTAGAGATGGCCCAAACT--CACCAAAATGGTGACACTCTTCAATTCCAGACCAGACCATTGGCCCTTCATGAATTTCTTCTCTCACAATGTTTTTTTAATGCACAG-TTTAGGGCAATCTAAGTACAAATCAAAAGTCTAACTTGTCTCTTGATTCCTCCCGTTGTCTATGTGTATATGCGTGAGTATAGAGGTGGATGAAAGTGTGCGTGCGTGTGC--GTGTGCAATTTTATACGTCTGTGTATTTTCTTAAGTATCTGTGCACACATAGAGTGCATTACTGCCACCTTTTTCAATAAGCTGGTTTATCAGTCATGGCTTCTACAGGTTTTGCTAATTTAGAC-TCCTTATTGCCATATCTTTAAACTAACAATAGATGATTTCGGtatatatatatatttttttttGCTTATTTATAGGTGCTGTATTTTATTATCTGATTGTTAGGAAGGGATGAAAGGGGCAAATATTCTTTAGAGGGATAGACTGCCGGCAGTATTGGGTATAATTTACAAGCTGTAGCTGTCATACTGTATATTACTGATGGAAAACTTTTTGACCGTATTGTGTATCATTGAAACTTTTGTCTTAGGTCAACATCTTTGGATGACATTTTAATGGTGCATTCATTATTTCTTAAGTTTAATTAATTAATAGTAC-TTTTTTTTTATTTGGGAGGGTGGGAGGGAGTTCTAATTTTAAAGGCAT-CTCCCACTATTGCCCCTCAGTGTGCGTGTTATTCCTTAGCTTGTAGG-CTTTGACTGTCAGATGTGAAACCACACTTCTTGCATGATG-TTTGGAGCTTATGTATTTTCATTCACAGTCTTTCAACCTGCAGCTGCAAGCCCTTAGTTGGAGTTTTCACAAACTGTAAGAGTCACGACACTAAAGACAATGCCTTTTCATGAACGAGAAGTTTCCAAGAGGCTCTAGGAGGCTGGGAGGCAGGCCCCTGGCTCTGTCTTTGGATGGTTGTATCACTCCTAAGCTTGAGATCCGGGTTCGGTGAGAAGAGAATTCACAG-TGGAGGGACGGAAGGGAAACACAGAGTCC--CACCTGGCTCTGTGC--------AAGGAAGTACTCATTCACACCAGGGAGTCGTTAGGGACACGGAGGAGCAGAGT----GGGATTGTGCCACTCCCTCCACAGAAACCTCAAGGGA-ACCTGTCATCATGGGTGAT-GATCTTAAA----TACCTAACTTTCACTAGAGTGAGAAGCAGAGTTAACAGGATCGAGGAGGGTAGTGTGCTAGTTTCAAAGGCATGTCTGTTCCTTAACCGCAGCCTTAAATCTGCGGAAATGGAAGTTGA-GGTTTTTTTCCATCCTGACACCCACACGGTAGCAGTGTAAGA--CAGCC--TTTGACTCTTCCAAGCAA------------------------------GTTTCT-----TTAATTTTTGAACTAGGTTCTTATTAATTTCCATCCTGTCTCTTGTGCCAGACCTCCATCTGGGTGCTTGATACAATCACTTGGTTAGGTTTTTGCTTG-AGTTCTGTATTTGTATTTTCTTATttattattattattattgttattatt-------TTGAGATCCCAACTTGATGGTGTTTGGGGTTAAGTTAGCACTGTCTGTAGTATGTCTAAGAGCTGCCAGT-AGATAACACAGAAACCTG------GGGGGTTATATCTGCCTCCTCATCATGTCCTCCCTCCCTTCCCAGTGTGAGTCCAAGGGTTCATCTTTCATCTTGAAAAGCAATATTCAAGTGCCTTGAACAGCGCTCCCTC-ATGTGG-TGACCTTCCGCTGGCTGGAGATCCAAGCAGTAGCTCCCACAGACAGCCAACCA---TCCTCTTTATACTCTC--AGCTTAAAAAGCTGAATTGTACTTCTCCCCAAG-GGGAAAAAATGGTTCCATATAAAACACTAACACTTCATCACAAG--CCACTGTTCCATTTCAAATG---CCTTTTTCTTAATTAGAGGCAGTAATCCTAAC-TAG-------GCCATT-ACCCAGTTGGCTAAGTGGGAGCCTGGTGTAAAATCCATGTTCACATCAAGCCCTCTTGACACCTCTTGATTCATGCCAAGTCCCCTTATGGCATCCGAAGTGGCAGGAATATGAGTTCT----TAGACATCTGCCC-ACTCACTTCCAC-------------TCTGACCTGGCTCCCAATCACCA---------------CCTCCTTGAAACAATA-GTCAGTTGAGATGTC--TGACCACTGTGTACTAGACCTCTCTCtttaaaaataaaattaaatttataaatGCAGGCACTTAGCTGAAGTCGATATCTTCCTAGCTAGCCACCCTGAAAAATATCACACCTTGAAGTGGCT--------TATCCCGGGTTCGAATCAGGGCAGAGTCCTGGGGATAT-----------------------AGTATTAGG---------TGCTGGGCCACACCA-------------CTCTG-----AAAAATGAGGCAAGAG--GACAGCTGTCAGTCTCCGT-GCACAGAT-GCTTCTGCTTGCAAAGCTCAGGTGTCCGTCTCCTTAGTAATCTTCCCTCTGATGGGCATCTCT--TTCCTCCTTGTTGAAAG-----------------------TCAGATCTGGTAGAT---------GGCTCAGAGTATAGCAGGGCTGTGAGCTGAGTGTTCCTCTGGACTCTTGTGGCCAACAGAGTCCCCGCCTGTGGCCATGCCATAGACCTACATGGCCATTCT-TCTCTACAGCCAGGGCCATGTTGAGCTGTGGAGCTTATAAGCAAGCTCAGCAGGAGGCAGCCCGCATCTAGTGCAAAGGAGGCATGCTCTAGGCATCAGCTAAGCA-CCCAAGGTTGTGTAGCTGTGAAAGCCCCAGA---GCTGGGGAGTCCAAATGCTGAT-------GCTGG-------------AGATGCCCTCCC-TGCCTCAGCAAGACTGGCT--CTTTGTCCTTTCGGAGCTGTGTTCTCTT---------ACAGCTCGGTGGGCTCTAGGGAC---CCTTGGGATATATG--ATTCCCAT-----------------------------------------------------CACATGCTTCT----------------------GCTCTCT---------------------------------------------------GTCAGATC--------------------------------CCTGAGGCTGG-GAGCCATCCTTGCAGAG-GAGATGGGGTAGAGCAAAGGTCAAGAACACATTGAGGGAATGGAAGGCTCTTGGCTTTGTTCCT----------------------------------------CCTGTCCTTC----AATGTCTCCCCTTT---------------CTGTTCTCTTCTACCTCA--------------CCACTTGATGTCACC---------------CAGAATTGTGAGGGAAGTGACCtgggggtgggggtggggggaggggtggCTTAAGAGGCTACAAGCTAGACCGAT---CATCTCATCTTGCTTGGCAGGTGTGCTTTTTG----CCTCCTTCAAAGAATACATCCAGAAGTGGTGTCTGGAGTCTGCTAAGCACA-GGCCCTTCCTCTTGGCTTCCAGCTGTTCTTGAAATTCCAGCAGCTGTTGGGTCTGTAGACAGGA-GTGGTCTCCAGCCTCAGAAATTCTTGCCTTTTGCTCTGCCT-------------TCCCGCACAGCTGTCAGACTCCATCACAGCCATTCCTTTGGTCTTGGCTTATCCCCAAATACTATGAGCACACTTCCCCAGGAACTGTGGCTGTC-CGAGTCTCTCGTCCCTAG----------ACCTTGCCATGAGCTCTGCTTTACAAACA-CAGCTCTGTCCAGGACAGAAAAGGTTGGACAGAATTCTTCC---CCATGCATGCTTGGTCTCTACT---------------TCCCAAAAGAACACTCCAGTTTCTGTTCCCTGTGGGAGGCAAGCAGCTCCCGAGACAG--------CAGTGGGTCT-----------GGGCCATA-CTGCTCC----------AGAGTGTACCTGTAG-CACGTAGGGAAC----TTTTATTTTGTTGTTCCCATCATGAATGTCAA-AGTCACTAGGCACAGCTGCCA----------CTGCAGATTTTCTGA-----AACTGAATCA-----------GGGGAAGGCTTTATGGCCA-----------CTTTAACCC------------AGGTGGGCTGAGAC---TCTCAAGTGGCTAGGTTCC-----------------------------TACCAGTAGACTTGGATGCTAAGAGAATGGGCTGATGAGAAATTTTCA----------TTCTGCCCA-------TGCTTTTTAGAT-----------GGAAAGTGAGGGTAGGAACAAGCTCCTTAGTAAAA--------GATACAACCC------------------------------------CAAGACCTCAGGCTCAGCCAG--TGGAAGAAGACAGTT---GAACAGCAAGG-GAAAAGCCAG----------------GATCCCCC------------------------------------TGTG-----TACCGCTT---------------AAGGACCTGCTGCTTCACCGAACCCCCGCCCCACCCCC-----GTGCCCACCCCTACT----CCTCTC---CTGCTACCTTCCCTCCAAAGAT-TCCATGGCCACGTCTTCAGTGG---CATATCGAGTTTTCATTTTTGGACAAAGTGACATTTAGCTTTAACAAGACATTTCCAAAGCTCCTGGTCTCCTTTGAAATGCTGACTTTAAAAGTTCAGCATTGTTGCC-------------------AAGAATGGGGGTGGGGGGGGCTAATGAAAGAAAGACGTTAGATTATGCATGAATGTGCACG--CCCCAACCCTCGGTTATTCAAATTTCAA-ATGCCTTTGAGTTGCTCTTCATAGATGGGTTTATTTTGCTC----ATGTTAAG-------TAGTCT--GTTACTGTAATTTTTGTAGTATTCTGGCTTTAATTTCTACCACAA--------ATATGCTATGTACTAAGCTTTCTGTGATCAGAAAGGAAAGGTGCCTTAAATCCCAATACCACGCCTCTATCCCTATGGAGAATATGTCAGAAGCACA--GCGCCAGGAAGCATTGGGACTTCCGTTGGCAAAATAGGACACCATTCAGCAAGACACATCCGAGTGGCACGGCACGGGGCTGCTTTTGTTTGCTAATTCCTTTTTTGTTTTTTAACTCCCAACCCATAAttatcttttatttgttgtttgttttatttttttttttttttGTAGTTCGCTTTAAACAGGAAGCACTT-AATAGATGGCTCTGTGTCGAAGCTCTGTGCAATGGAAATCACGTTGCTTTGGTGGGGGGGGGGTGTTTTGTTTTTCTTTTCTTTTTGAAAAAAGATAGCGTTATTGCACACCAAATGAACTCCTAAGTAAGCTTTAGAACCAGGATCGATTCAGGTCGTGGATGGGTATGTTCACTGTAGTTCTGTGTGTTCACGAACCAACGGGCAAGCTGGCCTCCCT--------------------------------TGGCCATTG---------------------AGGCTCAGCCCTGAGCC---------------CTGGGTCATGGCTGCCTGGGTTTCAGCCGCAGGGAACTTTCCTGGATGTCTGGCCCCACAGTCGACCCTTGAAGCACTTAACCCTCTCTTTGTGGAGATAGACCAACTGCTACTGATCTGTCAGCGTACTCGAGGGTGATTATAAAAGGATGTTTCTTTAAGAAAGAAAAAAAAATATTTCTATCTATCCTCTTCTAATTTATTATTAGGTTAATCATTTAAGTACTTATCAGGAGTGTGTTGTCATTTTGTG--TTGTTGTCGCGAATGC-TTTTGCTGTCACTCCAGTGGTTAACTGTCCCTTGCTCCCCACCTCTCTTCTCTCCATCCCTGAGTCCAAAGAGGTCTGGGGACCAGCAGTGGGAGACATGAGGGACAGAAGGGAGTCCTCCAGCACAATCAGACACCTGTCTCCCTAGTAGCCACTC-AAACCTGGCGGTCTCTACATATCTTAACTGTTCAATCCAGAGAGTTGACGAACAAAG----CTACC--CATGTCAGGCAG-TACTGAGGGGAGGCTTGCTC-CCAGAGGCGCTGCGATGCAGTGAGGAA-AACAGAAAAGCCAAGTTCAAGTTTCCCCAAAGCCTCCTAGAGCCTCTGTTAAAACTTCTGGGTTCATGAATGTTTGGCGAGCCTGGATCAGGAGAGAGGCAGGCAGTCTGGCCAAGGCCGTCACCCTGAGCCGGAAGGTGGTTTC-TCAATGGTCCCCACAGGTGACCACGACTTTGATT--TTCATTGTCAGTTGTCTTTCTTTGCATTCAAAGTTGGTCAAAAGCATCTTTTGAGGCAACAGGTCTTTGCTATCACT-GGAGGTGGCTAGAGGCCCCACACCTAG----GCATGGGTTGA-AGAACCCTTTACCC---------TCCCATGCCGGGAAAGGTGGAGAAAGGA-----CTTTCCATGGCTGGAAATGCAACCAGCAAGAAGCCCCCATAGCTTGCTCAGCAGAGGGTGGGGGTATGTAGGACTGAACTCTACCT---------GGGGGCAGCAAACTTAAAAAAGAGGCTCATCCCAGGGACAGGCAAAGGGCCTGCTCACCCAGTAGGCAGGGCCGGATACCTGCCTTTACCCCCAAACAGTCCACTGAGCCCAAATCCAAATTTCTTTCTGTAGCGTATCTTTCCCATTCTTTGAAATCTGGGAGGGGGAGGGTCCTACTCATCTCTTTGGGGGTAAAAGTCCTCCAATAAAATTTCCCC-ATTTCCCCAAGGG---------TTTTTATTTGTC-----TTAGTCTATGCATTTCTCTTTCT--ACGTCTCTAGTTCTCTCCTCCCACCCCACCCCAAACACACACAAAATAGACATCTCATGTCCCACCCTCTGAGACCA-CCCTGCCTCAGAAGAATGCCGGACATTTGGGAGACATGAGAATGCATTT-------TTTTAAAAAGCCTTCAAGCATTTTGAGAGTAGCTTGTCATAAGCTGACAGTGGGG--AGGAATCAGCTCCGTGACTTTCCTGA-GTCCCTTCCCATAGGACAAGAGACCTAGCTCTTTGCGTTTGTGCAATAA-------CTACTTGCTAGGAGAGCGGGTAGCACCACCCTCC--TCTAGACTACTAACACACAGCACAAGACACAT-----------------------GTCAGCCCTTCCTAAGCCC--TTCCCCCCA------------------------TCATGTGTTACATTTTAGCAGTATTTACTTTTTTTTTCTGTCAGGCACTAAGTCTTAGGTGTTTATAGAGCTTGTGTGTTAAT----ACAATCACAGATCTTTTTATTTTATTTTAATCCTCACCAAGACCCAATTGACCAAAAAGAAGCAAGAGGAAGAAAAAAAAATTGTAAAAGATGTCTCTCTCCtttttttttttttttttgtttttgtttttgttttgttttGTACAAGTAGTTTTGAGAAGCCT----TGTGTTGCTGTG-ACCATCTCCTATCACAGTCTTGATTTTCTTGTGATTTGTTTTCGGCATTTAAAAGT-----TGGTCCCAGCTGGC------GTGGGGGTGGGGGAGGCACCCGTCGGCCCCTCAGCGCCGTCCCT-TGTCTTTGGTTAGCCATACGAAATGTTTGTTCTCTGCACTGTCCAACGGTCCCTATTATGATACGGAGAAGCAATATCAC----CGAAGCTCACACCATGTATTATTATTCACTAGCACCCTAGGTGTGATAATTGAAGTAAATATCTTTTATACAAACACAAGCGCGTGTGGGCTGTTTTTATTGAAGATTTCTCCACGCTGAGGAACAGCAACCGCCTCTTAGACAC-AGGTCCAATGGGCACCTCAGTCATC-----------ATTCACTCCCTGCAAGCC-----------CTGTTGTCACATGGCTCTTAGAT------AATGCTGGGAGAAGCC-----------------TGGGTGTTGGCAGGTT--CCTGTACCCAGT-----GAGCAGGC----CCAAACGCCTGCCTGCCTGTCTGCTTGAGTCACT--CTCTGCCCCTGTA-TCTTTGAAACAAGCACACACCT---CGGGTCTCTGCCTCCTTGTCTGTCACCATGAAGGGACATCCTGGCCTGTCTTGCAGGCCTGTTACGAGG s rn2.chr12 21267491 8930 + 46874691 CGCCCGTGCCAA--ACCTCGCCGCACCCGCGGCCGGAGAGGACGCCGCTACCTCAGCCACTGCCCCAGCCATGGCCACTGAGGCCCCTGGGGCGGCCAGGGCCGGCCCTGCCGAGAGGAGTTCTGCG---TTGCCAAGCACCAGCGCGCCTGCCAACGCGCCTGCGCGAAGGCCTAGCTCTCTGCAGAGCCTCTTTGGTCTGCCTGAGGCAGCGGGCGCCCGG---------GACAACCCGGTGCGGAAGAAGAAGGCCGCGAACTTGAACAGCATCATCCACCGCCTGGAGAAGGCTGCCAGCCGGGAGGAGCCCATTGAATGGGAGTTCTGAGG------------GCGCCGGGCCTCTGGGCCTGACCAGCAGGGCCTCGCCGGGC--------------------------------------------------------------TAGCCAGGCCT----------------------------------ACTTGCGCCTAGCAGGTCCCCCAGGCCTAGTCAGC-------ACTGGCTAGTGGTGGGCTGGGGCAGGCGGGTG------------CGTGGAGGGCTGTGCTGACCCGAGGCCTGGA---------CGTGTTGCGCACTTACCGCCCTGCGGGCCACAGGGCAAAATCGCCATAGGCCAAGGTGCATATAGAAAACAAAGGAGCATTAAGCCCAATCTATGTTGTGTTTTCAAGGAAGAAAACGGAAATGTGTAGTCAAGCTTTTTTGTACCCTGAAGTGTTTTTTTTTTTT----AATTGCCCTAAGTGATTTCCACAGGTTCTGGAATAACTCTTTACAGCTTTTGCCTTGCGCCCTCCTCTTTCGTGTGGGCTTTAAAAAAAAAAAAAATCAAACCCACATATTAAAAGGGGGCTTTTTATCTGCCATCTAATGGCTTCAGAGCGATAATACACTATTATCTTCTTAAACCAGG---------AAGGGGGGG---ATTTTTTCAGAAAAATTAAAAAA-GAAAGTTTTTGTAGCTGTTCAGTTGCCACTAAGAGATTGCACAGTCAAACCGACTCTAAACACACTAGTTTGGATTCCTAAATATTTTCAAGAAAAGAATCTTCTCGTTTGAAACTTTGAATTAAAATAAAACACATTTACTCCACATATTTTTTAACAAAAAAAAGAAAAAAAAAGAAAAGTCACATCAGGAAAAATATCTGATTTTGTGGTAGCTGACGTAGTGTTTTCTTGTACGTAACTAGAATCCTGACATGTAGTGCACATTGATCCATAGCTTTAACTGACTCTGGGCTTTTGCTGGCCAGAGTTTGTTTAATACACTCCATTCTAGGCCAAATCAGGACAAAAA---------------------------GAAAGATCCGAATCTAGGTATTTTATAATCTGCTTTTTAACCTCTAACCGCAGAGCACGCTGATCAGACCTCATATCTCGGAGGTTTAGGAGACAAGTTAGAACTGTAGCATGTACCGGTTCATTTTGTTTTATTTATGGTGTCTACGTCTGTGTTGGCACATCTGCGCATGTGCAAGCGTCGAAAGGAAGGAAATGTAGGCCGGCAAGGTCACAGCAGTTAGTCCCT------------------CACGTGCAGGCAACAGTCTGCTCATCTTTCCTTGGCACAGAAGGCACCTCACCTCACGCCACTCTCCAGGGCACCTAACAGACTGAG-------CCCCCCAGGGGAAGATGCTCCCTGGGCTTGGGCAGGGCTGGCGCAGCCATGCGCGCACACACTCTTCCTCTCTCTTCTCATCC----CCTTCCCACCACAAGCACTGATAACCCTA-TCTACTCGTGGGAAGCTTCCTTCC-CTGCAGAAGAGAGAAC------------GCT--CTATCCCCATCCCTGTAGAGCTGGCCCAAACT--CACCAAAATGGTGATGCTCTTCAATTCCAGACCGGACCATTGGCCCTTCATTCATTTCTCCTCTCACAAGGTTTTTTTTATGCACAG-TTTAGGGCAATCTAAGTACAAATCAAAAGTCTAACTTGTCTCTTGATTCCTCCCGTTGTCTTTGTGTATATGCGTGAGTATAGAGGTGGATGAAAGTGTGCGTGCGTGTGC--GTGTGCAGTTTTATACGTCTGTGTATTTTCTTAAGTACCTGTGCACAC--AGAGTGCACTACTGCCACCTTTTTCAATAAGCTGGTTTATCAGTCATGGCTTCTACAGGTTTTGCTAATTTAGAC-TCCTTATTGCCATATCTTTAAACTAACAATAGATGATTTCGGTATATATCTATATTTTTTTTTGCTTATTTATAGGTGCTGTATTTTATTATCTGATTGTTAGGAAGGGATGAAAGGGGCAAATATTCTTTAGAGGGATAGACTGCCGGCAGTATTGGGTATAATTTACAAGATGTAGCTGTCATACTGTATATTACTGATTGAAAACTTTTTGACCGTATTGTGTATCATTGAAACTTTTGTCTTAGGTCAACATCTTTGGATGACATTTTAATGGTGCATTCATTATTTCTTAAGTTTAATTAATTAATAGTAC--TTTTTTTTATTTGGGAGGGTGGGAGGGAGTTCTAATTTTAAAGGCAT-CTCCCGCTAGTACACCTCAGCGTGCTTGTTATTTTTTAGCTTGTAGG-CTTTGACTGTCAGACGTG-AACCCCATTTCTTGCATGATG-TTTGGAGCTTATGTATTTTCATTCACAGTCTTTCAACCTGCAGCTGCAAGCCCTTAGTTGGAGCTTTCAC-AACTGTAAGAGTCGCGACACTAAAGACAATGCC-TTTCATGAATGAGAAGTTCCCAGGAGGCTCTAGGAGGCTGGGAGGCAGGCCCCT-GCTCTGTCCTTGGATGGTTGTATCACTTCTGAGCTTGAGAT----------------GAGAGTTCACAG-TGGAGGAACAGGAGGGAAA---ACAGGCC--CACCTGGCTCTGTGC---TGAGTGAGGAAGAGCCC-TGCACACCAGGGG--CATTAGGGACATGGAGGAGCAGGG------------------TCACTCCACAGAAACCTCAAGGGA-GCCTGTCGTCGTGGGTGATGGATCTTAAA----TTCCTAACTCTCACTAGAGTGAGAAGCAGAGTTAACAGGACCGAGGAGGGTAGTGTGTAAGTTTTAAAGGCATGTCTGTTACTTAAC---------AAATCTGAGGAAATGGAAGTCGAGGGTTTTTTTCCATCCTGGCAGCCACAAGGTAGCAGTGTAAGA--CAGCC--TTTGACTCTTCCAAGCAAGTTGGTCA-----------------TTTTCGTTCCT-----TTAATTTTTGAACTAGGTTCTTGTCGATGTCCATCCCGTCTCCTGTGCCAGA-CTCCATCTGGGTGCTTGTTACAGTCACTTGGTTAGGTTTTTGCTTG-AGTTCTGTATTTGTATTTTCTTATttattattattgttattattattattattTTAATTGAGATCCCAACTTGATGGTGTTTGGGGTTAAGCTAGCACTGTCTGCAGTTTTGCTAAGAGTTGCCAGT-AGACAGCACAGAGACCT--------GGGGTTCCATCTCCCTCC---TCAAGTCCTCCCTCCCTTCCCAGTGTGAGTCCAAGGGTTCATCTTTCATCTTGAAAAGCAATATTCAAGTGCCTTGAACAGCGCTCCCTC-GTGTGG-TGACCTTCCGCTGGCTGGAGACCCAAACAGTAGCTCCCACAAGCAGCCACCTA---TCCTCTTCATACTCTC--AGCTTAAAAAGCTGAATTGTACTCCTCCCCCAGAGGGAAAAAATGATTCCACATAAAACACTAACACTTCATCACAGG--CCACTGTTCCATTTCAAATG---CTGTTTTCTTAATTGGAGGCAGTAATCCTAAC-TAGGTCTCACGCCATT-GCCCAGTTGGCTAAGTGGGAGCCCACCATGAAATCGATGCTCACATCAA-CCCCCTTGACACCTCTTGCTTCATGCCAAGTCCCCTTACGGCCTCTGAAGTGGCAGGAATATGGGTTCT----TAGACGCCCGCCC-ACTCACTTCCAC-------------TCTGACCTGGCTCCCATTCACCA---------------TCTCCTCGAAACATTA-GTCAGTTGAGATGTC--TGACCACTGTATATTAGGCTTCTCTCtt----aaaaaaataaaatttaaaaatGCAGGCACATAGCTGAAGTTCATATCTTCCTAGCTAGCCACCTTGAAAGTGCTTA----------TGACT-------GTATCCCGGCTTTGAATCAGGGCAGACTCCAGGGGCTGT-----------------------AGTGCTAGG---------TATTCAGCCACACT------------------------GAAAATGAGGCCGGAA--GATAGCTGTCAACCTTCGA-GGACAGAT-GCTTCTGCTC----------AGTGTCTGTCTCTTTGGTAAGCTTCCCTCTGATGGGCATCTCT-----CTTCTTGTTTAAAG-----------------------TCAGATCTGGTAGAT---------GGCCCAGAACATAGCAGGGCTGTGAGCTGAGTG--ACTCTGAATGCTTGTGGCCAATAGAGTCCCTGACCGTTGCCACGCCATAGACCTACATAGCCCATCTGCCTCTACAGCCAGGGCCAAATTCAACTGTGGAGCCTATGAGGAAGCTTAGCAGGAAGCAGCTTGTATCCAATGCAAAAGGGGTGCACTCTTGGCATCAACTAAGCACCCCAAGGTTGTGTAGCTGTGAAAGCCCCAGA---GGTGGGGAGTCAGAGTACAGATAACCAGCATCAG-------------AGATGCCCTCCCTTGCCATAGCAAGA--------CTTTGTCTCTTCGGAGCTGCAGGCTCTTGAA--CAGCAAGGCTCAGTGGATTCTAGGCAC---CTTGGAATGGTTTG--GTTCCTGT-----------------------------------------------------CACATGCTCCT----------------------GCTTTCCACCTG-------------CTGCCCTGGACTGCAGT----CA-----TTCCAGTCAGACC--------------------------------CCTGAGGCTGT-GAGCCATCCTTGCAGAG-GTCAGGGAG------------------CACATGGATGCAGTGGAAGGCTCTTGGCTGTGTTCCT----------------------------------------CCTGTCCTTC----AATGTCTCCCCTTT---------------CTG-TCTCTTCTACCTCA--------------CCACTTGATGTCACT---------------CAGAGTTGTGAAGCAAGTGGCCTGGGGGAGG-----------GGGGT-GCTTAAGAGGCTGCAAGTTTGATAG--------CTCATCTCGATTGGCAGGTGTGCTTTCTG----CCTCCTTCAGTGAGCACATCCTCAAGTGCTGTCTGGAGTCTGCTAAGCACAGGGATTTTCCTCTTGGCTTCCAGCTGTTCTTGAAATTCCGGCAGTTGTTGGGTCTGTAGGCAGGA-GTGGTCTCCAACCTCAGAAATTCTTGTCTTTTGCTCGGCCT-------------TCCCACACAGCTGTCAGACTCCATCACAGCCATTTCTTCAGCCCTGGGTTATCCCCAAACAATATGAGCACACTTCCCCAGGAACTGTGGCTGTC-CGTGTCT-------CTAG----------ACCTTACCATGAGCTCTGCTTTACAA--A-CAGCTGTCTCCAGGACAGAAAGGGTCAGACAGTTTTCTACCCCACCATGCATTTGTGA-----------------------TCCCAAAAGAACATGCCAGTTTCTGTTCCCTGTGGGAGGAAAGCAGCTCCCAAGACAG-------CCGGTGGACCT-----------GGGTCATACCTGCTCTGATGAC-CAGAGCGTGTACCTGTAG--GCATAGGGAACTATGTTTTATTTTGTTGTTCCCATCATGAATGTTAA-ATTCACCAGACGCAGCTGCTG----------CTGCAGTTTCTCTGGGACTTAACTGAATCA-----------GGAGAAGGCTTTATGGCCA-----------CTTTGGCCC------------AGGAGGCCTGAGAC---TCT-AAGTGACTTGGTTCCATCTCCCAGAG-GTGCTACCCACCAGTCTGACCAGTAAACTTGCATGCTAAGAGAATGGGCTGATGAGAAATTTTCATTCTTGTCACTTCTGCCAG-------TGCTTTTCAGATGGAAACTACCAGGAAAGTCAGAGTAGGGACAAGCTTCTCAGTAAAG--------GATACAGTTC--------------------------------------------------CAGCCAG--TGGAAG-AGACAGTTTAGGAACAGCAAAG-GAAAAGCCAG----------------GATTCCCC-------------------------------------GTG-----TACCACTT---------------GAGGACCTGCTTCTTCACCAAA-CCCCATCCCACTCCT-----GTGCCCCCCACTACT----CCTCTC---CTGCCCCCTTCCCTCCAAAGAG-TCCACAGCCACATCTTCAGTGG---CATATCGAGTTTTCATTTTTGGACAAAGTGACATTTAGCTTTAACAAGACATTTCCAAAGCTCCTGGTCTCCTTTGAAATGCTGACTTTAAAAGTTCAGCATTGTTGCC-------------------AAGGATGCGG--GGGAGGGGCTAATGAAAGAAAGAC-TTAGATTATGCATGAATGTGCACG--CCCCGTCCCTCAGTTATTCAAATTTCAA-ATGCCTTTGAGTTGCTTTTCATAGATGGGTTTAGTTTGCTC----ATGTTAAG-------TAGTCT--GTTACTGTAATTTTTGTAGTATTCTGGCTTTAATTTCTACCACAA--------ATATGCTATGTACTAAGCTTTCTGTGATCAGAAAGGAAAGGTGCCTTAAATCCCAATACCACGCCTCTATCCCTATGGAAAATATATCAGAAGCACA--GTGCCAGGAAGCATTGGGACTTCCGTTGGCAAAATAGGACACCATTCAGCAAGACACATCCAAGT-----GGCACGGGGCTGCTTTTGTTTGCTAATTCCTTTTTTTT-------CTCCCAACCTATAATTATCTTTTGTTTGTTGtttatttta------tttttttttataGTTCGCTTTAAACAGGAAGCACTT-AATAGATGGCTCTGTGTCAAAGCTCTGTGCAATGGAAATCATGTTGCTTTTGTTTGGGGGGTTTGTTTTGTTTTTCTTTTCTTGTTTTAAAAAGATAGCGTTATTGCACACCAAATGAACTCCTAAGTAAGCTTTAGAACCAGGATCGATTCAGGTCGTGGATGGGTATGTTCACTGTAGTTCTGTGTGTTCATGAACCGACGGGCAAGCTGGCCTCCCT--------------------------------TGGCCACTG---------------------AGGCTCAGCCCTGAGCC---------------CTGGGTCATGGCTGCCTGGGTCCCA---ACGGGGAACCTTCCCGGATGTCTGACCCCACAGTCGACCCTTGAAGCACTTAACCCTCTCTTTGTGGAGATAGACCGACTGCTACTGATCTGTCAGCGTACTCGAGGGTGATTATAAAAGGATGTTTCTTTAAGAAAG---AAAAGATATT----TCTATCCTCTTCTAATTTATTATTAGGTTAATCATTTAAGTACTTATCAGGAGTGTGTTGTCATTTTGTG--TTGTTGTTGCCAATGC-TTTTGCTGTCACTCCAGTGGTTAACTGTCCCTTGCTCCCCACCTCTCTCCTCCCCATCCCAGAGTCCAAAGAGGTCT-GGGCCCAGCAGTGGGAGACATGAGGGACAGAAGGGAGTCCTCCAGCACAATCAGACACCTGTCTCCCTAGTA-CCACTCAAAACCTGGCGGTCTCTACATATCTTAACTGTTCAATCGAGAGAGTTGACAAACAAAG----CTACC--CACGTCAGGCAG-CACTGGGGGGAGGCTTGCTC-CCAGAGGCGCTGCAATGCAGTGAGAAA-AACAGAAAAGCCAAGTTCAAGTTCCCCCAAAGCCTCCTAGAGCCTCTGTTAAAACTTCTGGGTTCATGAATGTTTGACGAGCCTGGATCAGAAGAGAGGCAGGCAGTC------AGGCCGTCACCCTGAACTGGAAGGTGGTTTC-TCAGTGGTCCCCACAGGTGACCACGGCATTGATT--TTCACTGTCAGTTGTCTTTCCTTGCATTCAAAGTTAGCCAAAAGCATCTTTTGAGGCAACAGGTATTTCCTAGCACT-GGAGGTGGCTAGAGGGCCCTCACCTGG---AGCCTGGGTTGAGAGAAACCTCCATCC---------TCCCATATCAGGAGAAGTGGAGAAAGGA-----CTTTCCATGGCTGGAAATTCCGCCAGCAACAAGCCCCCGTTGCTTGCTCAGTGGAGGGTAGGGG-ATGTGAGACTGACCTCTACCTGGGT----GGGGGGGGGCAAACTTAAAAAAGAGGCTCACCCCAGGGACAGGTGAAGGGCCTGCTCA-CTGCTAGGCAGGGCAGGATACCTGCTTCTACCCT--AACGGTCCACTGAGCCCAAATCCAAATTTCTTTCTGTATCTTATCTTTCCCATTCTTTGAAATCTG---GGGGGCAGGTCCTACTCATCTCTTTGGGGGTAAAATATCTCCCATAAAATTGCCCCAATCCCCCCAAGGG---------TTTTTATTTTTC-----TTAGTCTATGCATTTCTCTCTCTGAATCTCTCTAATTCTCTCCTCCCACCCC-------AAACACACAAAATAGACATCTCATGTCCCACCCTCTGAGACCACCCCTGCCTCAGAAAAATGCCGGACATTTTGAAGACATGAGAATGCATTTAAAAAAAAAAAAAAAAGCCTTCAAGCATTTTGAAAATAGCTTGTCATAAGCTGACAGTGGGG--AGGAATCAGCTCCATGATTTTCCTGA-GTCCCTTCCCATAGGACAAGAGACCTAGCTCTTTGCGTTTGTGCAATAA-------CTACTTGCTAGGAGAGCGGGTAGCACCACCCTCC--TCTAGACTACTA--ACACAGCACAAGACACAC-----------------------GTCAGCCCTTCCTAAGCCC--CT-CCCCCA------------------------TCATGTGTTACATTTTAGCAGTATTTACTTTTTTTTTCTGTCAGGCACTAAGTCTTAGGTGTTTATAGAGCTTGTGTGTTAAT----ACAATCACGGATCTTATCATTTTATTTTAATCCTCACCAAGACCCAATTGACCAAAAAGAAGCAAGAGGAAGAAAAAGAAATTGTAAAAGATGTCTCTCTCCttttttttttttttttt------------------ttttGTACAAGTAGCTTTGAGAAGCCT----TGTGTTGCTGTG-ACCATCTCCTATCACAGTCTTGATTTTCTTGTGATTTGTTTTTGGCATTTAAGAGT-----TGGTCCCGGCTGGCGTGGGGGTGGGGGTGGGGGAGGCACCCGTCGGCCCCTCAGCGCCGTCCCT-TGTCTTTGGTTAGCCATACGAAATGTTTGTTCTCTGCACTGTCCCACGGTCCCTATTATGATACGGAGAAGCAATATCAC----CGAAGCTCACACCATGTATTATTCCTCACTAGCACCCTAGGTGTGATCATTGAAGTAAATATCTTTTATACAAACACAAGCACGTGTGGGCTGTTTTTATTGAAGCTTTCTCTCCCCTGAGGAGCAACTGCCGCCTCTTAGACGC-AGGCCCAACGGGCACCTCAATCAC-------------TTCACTCCCTGCGCACC-----------CTGTTGGCACATGGCTCCTAGGC------AACGCTGGGAGAAGCCTGGG-ATGTAGCGGATTTGGGTGCTGGCAGGTT--CCTGTACCCAGT-----GAGAGGAC----CCAAA---ACGCCTGCCTGCTTGCTTGAGTCCCT--CTCTACCCCTGTATTCTTTGAAACAAGCACATGCCT----GGGTATCTGCCTCCTTGTCTGTCACTATGAAGGGGCATCCTGACCTGTCTTGCAGGCCTGTTATGTGG a score=15526.000000 s hg15.chr7_random 952916 133 + 1057565 GCCAGCTTCAGAGGCAGAAAAAG--AGTGAGATTTCATGTTCTGACTGCAATTGGGCGATGCCTCCATTCCAGGCAAATGGTTCAGCCTT---------GACCT--TTCTCCCGTCCCTGCAGTTAAGTGGGTCTGAACAGAACCt---- s mm3.chr5 15844037 143 - 149719773 GCCAACTTGGGAGGCAAAAGTGGATAGAAAGGTTCCA------GGCTGCAGCTGGGAGACTCACCCACTGTAGGCACGTTG-CCAGCTCTCCAGGAATAGGCTTTATACTGCCTTCTCTAAGGATAAGTGGGTCTGAATCAAATTAGAGG s rn2.chr12 21278562 141 + 46874691 GCCAACTTGGGAGGCAAAAGCGGATAGAAAGGTTCCA------GGCTGCCGCGGGGAGACTCACCCACTGTAGGCACATTG-CCAACCCTCCAGGAATAGGTCT--TACTGCCTTCCCTAAGGATAACTGGGTCTGAATCAAATTAGAGG a score=26771.000000 s hg15.chr7_random 953694 287 + 1057565 CCTTATTTGATGCTCTGAAGAAACACAATTGCAGGTAG----ACAGGGTGGCGCGACGTGATGATGAGATATATTAGAGCACTTGAATTGTCTGCAATGGTCCTGTGTGCTTC-TGTTACAAAGCCCCTCTGAGTGGCTGCCTGGGGGCATGCTGCTCCTCTCCACGGTCCTAACATGCCAGCTTTGG---GGGCACACAGCTTGCTGGTGTCTACTTCAGCTCATCACTGATTCCTGTGAGGTGGCAGAGGCCTGGGCCTGCATGTACGGACCCAACCAGGGAACTGGGAGGGC s mm3.chr5 15844375 247 - 149719773 CTTAATAAGATGCTCTGAGAAAGTACAGTTACAGATAGATATACAGGGAGGGAGTGTGGAGTAGGGCAGTATAT----ACAAGAGAACTGTCTGTATGCATTCTGTCCACTGCATTTGACAGAACATCTC--AGGGGCTG-------------------------------------GCCAGCACTGGTGAGAGGACAAAACCCATTGGTC----CCATGGTTCACCA-TGGTTCCCATAAGGTGGCAGAGAGCTGGGTCTGCCATTACTAAGCCATTCTAGGAGCATGTAGGGC s rn2.chr12 21278902 251 + 46874691 CTTAATATGATTCTCTGAGAAAGTACAGTTACAGATAGATGTACAGGGTGGGACTGTGAGATGGGGCAGTATATTGGAACAAGAGAGCTATCTGTATGCATTCTGTCCACTGCATTTGGCAGAACATCTC--AGGGGCTG-------------------------------------Gccagcactagtaagagaactaaacccactggag----ccatggttcataa-tggttcccagaaggtggcagAGAGCTGGGTCTGGCCTTACTAAGCCATTCCAGGAGCTTGTAGGGc a score=8772.000000 s hg15.chr7_random 955541 52 + 1057565 ACTGGCTGGCCCTGCCAGGGTCTTGCTGCCCGTGGCCAGGCCCCATCTCCTG s mm3.chr4 20364854 50 - 152921959 ACTGTCCGG--CTGTCAGGGTCCTGCTGTCTTCGGCCTCGCCCCATCTTCTG s rn2.chr5 21078053 50 - 191625135 ACAGTCCGG--CTGTCAGGGTCCTGCTGTCTTCGGCCTCGCCCCAACTTCCA a score=1047.000000 s hg15.chr7_random 957590 18 + 1057565 AAACAGGAAGTAGGATTC s mm3.chr14 60880494 18 + 115844145 aaattaaatgtgaaattt s rn2.chrX 10117206 17 + 133900917 AAATTAGATGTGAATTT- a score=534.000000 s hg15.chr7_random 957608 36 + 1057565 TTTGGTAGGAGTGAGTA-AGGAGGGGTCAGCACAGGG s mm3.chr17 28695301 27 + 93529596 TTTGGTAGG-----GTATAGGAG-----AGCACTGTG a score=17726.000000 s hg15.chr7_random 957644 411 + 1057565 GAAGCCCTCAGAAG--------------CTCACCCAGGAGGCCACAACTGGGGCTGCGTTTAACCCCCACAGCCATGCCAGATGAGCTGCTTCTCAGCCACCACGTGGGATCGATTTCTTCCACATTGAACTTGGTCAAGGCCCGCTGCTTTGTGCTGTGGATCTTCTGGCAGCCAGGGAACTTAGACTTGGCCCTGCATATGGCCTCAATCACACCCTCATGGTTCTGC-TCTTAGTACGGATAGACACAATGACCTGGCCAACATAAACCCTGGCTGTCACACCCTGGGGCTTTCCAACGGCACCCCGAATACTTGCCTGGTGCCTAGACCACAGACAGCA-CGAGGTCAGAGACACAAATGTCCAGTG-GAAAGAATTGTGTCCAACGTTCCTTAGGGCAACCCATGTAAGAAACAGACTGTGTg s mm3.chrUn_random 89132942 425 - 117911829 GAAGCCTTCAGGAATGCAGGGCTCTCCACTTGTCCAGAGGACCACGATTGGGGATATATTTGACACCC-CAGCCATCAGGGATGAGGCGCTTCTCAGCAACCATGTCT--TCAAATTCATCTGCATTAAACTTGGTGAAGCCCCACTTCTTTGAGATGTGGATCTTCTGGCGGCCAGGGAACTTGAACTTGGCTCTTAGCAGAGCCTTAATCACATGTTCCTTGTTCTGCAACTTGGTTCGGATGGACATGATGACCTGGCCAATGTGAACCCTGGCCACTGTGCCCTGGGGCTTCCCAAAGGCACCAGGCATCCCTGTCTGGAGCCTAGATCAGGGATAGCATTGTGATCAGAGGCTTGATTACCAACTGCCAGAAAATTGTCTCCAAGGTCCCTTGAGGCAGCCCATATAGATACTAGGCTACATA a score=9988.000000 s hg15.chr7_random 958365 63 + 1057565 CAGACTGTGTACTTTACTGAGGAGGCTGCTGTTTGCAACCACTGCACCCTACAAGGTCACTAt s mm3.chrX 91593734 50 - 149996094 -----------CACTACCAAGGAGGCTGCTGTTTGCAACCATTGCACAC--CAAAGTCCCCAT s rn2.chr1 207704006 50 + 276301343 -----------CACTACCAAGGAGGCTGCTGTTTGCAACCATTGCACAC--CAAAGTCCCCAT a score=2548.000000 s hg15.chr7_random 958755 25 + 1057565 agatcataggttgcagagg--gaggcc s mm3.chrX 92113388 25 - 149996094 agaccattgaaagcacgtg--gagccc s rn2.chr1 208285039 27 + 276301343 ggaccattgaaagcacatgtagagtcc a score=16362.000000 s hg15.chr7_random 962927 394 + 1057565 GAACCGAGCCAGCCAGCTGCCCACCCCTTCCCCCACAGGGGG--CCAGGCC------CGGGCCTCCCCACCTGGGTTCTGTACAGCGATGGGGTCCACAGCTCTCTCTCCAGCTCCTTCTGTGTCCTCGCCCCAGAGCCCTGTACTCCagaggttgaagaacttgccgaagatcgtgaaattcataaaaggcagggccagaatgcaagcccggttctggactt-----------gacatcaaGTGGCCACCA------------GAGATGTCACCCCAGCTTCCCCACCTGCGTGTTCCAGCCTCCAGCAGAGAAGGCAGGGTGAGGCAGCCGGTGGGGGATAGGGGACCCTCCCGTGGCCGGTGAGGCCCTGTCCTTCTCTAAGTACATCTAACTGAGGCCCCTCTCTGGTGGAAGCCCGCACA s mm3.chr5 15846474 293 - 149719773 GAGCCATGCTGAGCTGCTGCCCACACCTTCCCCATGTGAGGGTTCCAGCTTCA----TATACTTCCTCTCCTGAGGTCAA----------------ACGCC-C---------CTCCTACTG-----TCGCCCTGAAG--TTGACCTGCCCAAGTCAGAGAGTTTGCCCAAGGTCATGAACTCCCTAGAGAGAAAGCCTAGAATTCCAGCTCAG---------------------GACCTTCCCTTCCT----------------GACACATGGCCAAAGCACGTTGGTATACATGCCCCTGCCTCCAACCAACAAGGCAGGCTCAGCCA--------------------------------------------TCATTCTC--------TCTAAGTAAGATCC------AGCAGGGTGCTGTACA s rn2.chr12 21281429 302 + 46874691 GAGCCACACCAAGCTGCTGCCCACCCCGTCCCCATTTGAGGGTTCCAGGCCTAGGTCCATACTTTCTCTCCTGAGTTCAA----------------ACATCTC---------CTCCTACTG-----TCACCCTGAAG--TTGACCTGCCCAAGTCAGAGAGTTTGCCCAAGGTCATGAACTCCCTAGAGAGCAGGCCTGGAGTTCAAGCTCAGTTCTGGAACATTCTAGATCAGGACCTTCCCTTACCACCACATAGCCATATAGAGACATGACCAAAACATGCTGGTATGCATGCCCCTGCCACCATCTGACAGGGCAACCTCAGCCA--------------------------------------------TCAtt----------------------------------------------- a score=51393.000000 s hg15.chr7_random 963321 1117 + 1057565 GCCAGTCTCCTGGCCTTCGCTTCCTCCCAGCGTGGAGTGACAGTTTCAAAGCACAGCTCTGGTTGCTGCTGGGATCCAGCTGGGCTCTGGGACAGTGTCC-AGATCCTGTCCCCTGCAGCCTCCAGTTCTCTGTCCACCCCCCTCTACCCACAGCCTTCCCTCCAGTCTCACCGTCTGCCAGCCTCTGCTGCCCTGTCTT--ACC--CAGCCTGTTCTCTCTGCCTCACCAGCAGCCATCCCCCAATTCTGCTGCCCGTGCAACTGGCCTGTGCTCCTATCACCCCAAGCCACCTCTTCAGGGAT-------------GGCCTCCCCCAACCACTCAGCCCTGCACCCTCAGATCCCCTCAGGAGCTA----ACCCAGTGCCC-AGAGCATCTGCAGCAGCGCCAATGGCCAGGCCTCCAGGCCAGCTTAACACATGGGCCTTTTCCAGGATAGCGGGCCA-----CCAGCTTGGAACTGGGGCAGCCT-AGGATAGAGGGTTTGCAGCCAGGATGC-TCACACCTGCACAGAATGTCACCTACATACACGGCAGGACTGTGTGCCCACCCCTGCAGTAGCAGACACAGGAACAAGTGCACGGGGACCAGGCCCACGCACCCCA------TCATCT---CCCTGGTGCCCACGGATGGTGCTGGGAGCTGCAAGTTGCTGCCACCCCAGGGACCTGACCAAGACCACACTGGGGTGGTCACAGACTGGGGGCAGATAAAACAGGCAGTGCAAGGAATCATCTCAGCAGCTTTTTATCCACCCCTCTTGCCAGGCGCACACCTCCAGGG---AAAAGGGCTCACTCTGGCCAGGCAAAAGTCACCTCTGCAAAGGTTCTCCATCTCAGCCCTGTCTCTCTGTCCCCCAGGCCCTCATCCCTGAGGTGGA--------------ATGTGGCTT-CCCTGAGCCTTGTTGGAGCTTAACGCCCTCTTTTTATCCCAGGAGTCTGTCCCCATGGTCCCAGCAC---------------------GGTTCTTGGATGTGCTCCTGTTTGTGGCCAaactgaagcatcccctcccttggtc----caggaccttcacctctattaatgtgacccaaggccccattagctttctGGTGGTTTCCTCTCCCTACATCTCACAACCGCTGTCCACCTCCCATCCTAAGCATG-------------AGTGGCCGGCTCTGCC s mm3.chr5 15847085 885 - 149719773 GTCAGGCTTC-----------TCCTCCCTGTGTGGAGTGACAGGTGGCAA-CACAG-------------------------------------AGTACCCTAGACCCTGTCCCTT-CGGACT------------------CACCCCACAAGCTCCCTGCCCTGC----------TCTGCCAGCCTCCT--------------GTT--CAGCACGCCTGGTCCA----ACCACTCAGCATCCCCCA-----------------------------------------AAGCCATGTCTTCAGGGACTGCCCCCACCCCACCCCACCCCCAGACCTTCATCCCTA---ACCAAGAACCCGTCACT-GCTG----CCACACTATCAGGGAACATTTTCAGCCA---CAGTGGCAAGATCT-CAGGCCAGCCCAACACATTGTTCACT----GGCGAGCAGGCCCTGCCTCCAGCT--GACCCGGGCCAGCCTAAGGCCTGAGTGTCTGCTCTTGGGGCGCTTTATATGTGGCCAGCATGTCTCTGCTCCTCACA--AGGACC---TGCCTTCCTCC-------CACTCCCAG-----------------------CAACCCTCTTGACTCGCCACACCT---CTTCTGTGTCCATGGGCACCTCTGGAAGTCTTGAGTCATT-----------------------CCCATGCTGAAATGGCCACAGACTGGTGACAAATAAGACAAGTGGGCCAAAGTGTC--------------TCATCCACACC-----CTAGGC-----------------AGCAGGGTTCCCTGGGTCCCTGGTAA------TCCCGTGATAATTT---------GCACACTTGTAGGAACCCACGGTCGCTCA------GGGTGGGTAGCGGTTGTTTCAGTATAAGTT-CCCTCAGCCCCA----------------TGCCCCTAGCCCAGGGCACAGGTCCTTTGGTATGGGACC---------------------AGTTGGTGGATATTC------------AGAAACTGAGCCAATCCCTTCCTTCCACCTGTCTG--TCTTTCACTCTGTAAATGATACCCAGAGCCCTGTTGGCTTTCAGTGGCTGTCTTCTCCCTCTGTCTTGATGCTTCTGTCTATCCGCTCTCTTAAATTTGCACCATTCAGTGAGGAGGTAGATTCTACA s rn2.chr12 21282032 876 + 46874691 GTTAGGCTTC-----------TCCCC---GTGTGGAGTGACAGGTTGCAA-CACAG-------------------------------------AATGCCCTCGTCCCTGTCCCTT-CAGCCT------------------CCCGCCACGAGCTCCCTGCCCTGC----------TCTGCCAGCCTCCTC-ACTGTGCCCTAGGTCAGCAGCACATCCGAACTG----ACCAC-------CCCTCA-----------------------------------------AAGCCATGTCTTCAGGGAC-------------------------------AACCCTA---ACCAAGAGCCCGTCACT-GCTGGCTGCCACACTATCAGGGAACATTTTCAGCCA---CAGTGGTAAGATCT-CAGGTCAGCTCAACACATCGTTCTGT----GGGGAGCAGGCCCTGCCTCCAGCT--GGCCTGGGCCAGCCTAAGGCCTGAGTGTCTGCTCTC-GGGTGCTTCACACATGGGTAG-ATGTCTCTGGTATTCGTA--AGGACC---TTCCTTCTTCC-------CACTCCCAG-----------------------CCACCCACTCGG------ACACCTCCCCTTCTGTGTCCTTGGGCACCTCTGGGAGCTTCCGGTCGTT-----------------------CCCATGATGAAATGGCCACAGACTGGTGACAAATTAAACAAGTGGGTCAAAGAATT--------------TGACCCAAGCC-----CCAGGCA---------ATGGTATAGCAGGGTTCCCTGGGTCCCTGGTAA----GTCCCTGTGATGATTT---------GCACCCTTTGAGGGACCCACGGTCATTCA------GGATGGA----------TTCAGGATGGCTTCCCCTCAGCCCTG----------------TCCCTCTAGCCCAGGGCACAGGTCCTTTACTATGGGGCCATTCGTGGGTCTTATGGGACTAGTTGGTGGATATTC------------AGAAACTGAACCAGTCCCTCCCTTCCAC----CTG--TCTTGCCGTCTGTAAATGATACCCACAGCCCTGTTGGCTTTCTGTGGCTGTCTTCTCCCTTTGTCTCAATGCTTCTGTCTGTCTGCGCTCCTGAATTTGCCCTGTACAGTGAGGAGGTAGATTCTACA a score=2302.000000 s hg15.chr7_random 964438 96 + 1057565 ATCCCATCCCACAGGCCAGGACCCAAGGACTCTGTACTCAGGCCAGGAGGGCATGGTATTTATCGTCTCTCTGGACCTCTCCCCTTTGGGGTCTCC s mm3.chr5 15847970 82 - 149719773 GTGC--TTCCACTGGCCTGGGTCAAAGGATTATGCAC-CAGGCCAGCAGGCCATGACATTGGTC-----------CCTCTCCCGACGAGGGTCACC a score=60921.000000 s hg15.chr7_random 966185 640 + 1057565 GGCAGTGGTGAGTTGGGAGGGAATAGCCAGCACTCTCACAGCATCCAGGCAGCCCTGCTTCCAGACCGTGGGTTGGAGAGGCAGAACCAGGGGAGGGCACCAAGGGTCCC-----ACCAGGCTCCCTCTGACGGCCATGTCTTCCTTTGGCCACAGGACGCTGTGCAGAGCTGCAAGTCCGTATCACTGAGGCTGTGGCCACAGCCACTGAGCAGAGAGAGCTGATCGCCCGCCTGGAGCAGGACCTGAGCATCATTCAGTCCATCCAGCGGCCCGATGCCGAGGTGAGCCCACCCCCCTGCCCCA-----TGCCCATCTCGCTACCTGCCCAAC---TGACTTAGCCTCTGCAAACACTGACTTCCCAGATTAGCCTGTGTATCAGGCAGCTGGTGACAACCCAGAAGGGCTGTCACCTAAAACCATTGGGTTCTCCCTGCTTACTCCATGAATACCACCCTGCCTCCGATTTGGGGTGACAGGCCATGGGGCAGAGGCCACAGGGCTTCCT---AGCGGT----AGCACA--GAGGCC---------CGTCTTTCCAGGCACTGCCCTGAGAGCAGAGGCAGAGGCAAGGCCAGGAC-CATGCACCCATCT-CCCAGCTAAAGGACCTGGAGCCCAGAGatcacagcaggctgggacataaacagccc--------------------agg s mm3.chr5 15849268 607 - 149719773 GGCAGT-GCGGGTGTGGAGGAAGCAATCAGAGCCCT---------CGGGCATTCATGCTTTCAAACTTGGGTTTGTC-------------TGCAAGGTACCTAGGATCCCTGTGTCCCTGGACTCCTCTGATGGCCGCATCTTCCTTTCACCACAGGGCGCTGTGCGGAGCTGCAGATCCACCTCACTGAGGCCACAGCCAAGGCTGTTGAGCAGAAGGAGCTGATCGCTCGCTTGGAGCAGGACCTCAGCACCATCCAGTCCATCCAACGGCCTGATGCCGAGGTGAGCCT-CCCGCCTGGCCTGCTCACTGCGCA-CCCACTCTCACCCCCGTGTGTGTCGCGGAACCCAGAAGTACTGACTTTCCA----AGTCTG-----CAGCCATCT--------CCCTG-------GCCTCCCCAC------GGGGTTTTATTG----CCCCGTGCAGGCCACCTTTTTTCC--------------AACCTCACGGCTGATGCCACATGGTTTACTCTGACTAGTAGACAGCACCGTGAGGTC-GGCACTAGCTTGTGTCCAGGCACT----AAAAGTTCTGGTCAGAGGCAAAGCAAGGTCACACGGGCCCAGCTGCATAGCTGATGGACCC-TTGTCCTGTGAACA-------CTGGCACCTAAAGGGGCCACTTGTCCTTTTGATTTTTGAGG s rn2.chr12 21283921 582 + 46874691 GGCTGT-GCAGGGGTAGAGGAGGCAGACAGAGCTCT---------CAGGCGTTCGTGCTTTCAAACTTCGGTTTGTC-------------TGCAAGTTACCTAGGATCCCTGTGTCCTTGGACTCATCTAACAGCCTTGTCTTCCTTTCACCACAGGGCGCTGTGCGGAGCTGCAGATCCATCTCACTGAGGCCACAGCCAAGGCCGTTGAGCAGAAGGAGCTGATCGCTCGCTTGGAGCAGGACCTCAGCACCATCCAGTCCATCCAACGCCCTGATGCTGAGGTGAGCCT--CTGTCTGCCCTG------------------CTCACCCCAGTGTGTGTCCCCAAAGCCAGAAATACTCACCTCCCA----AGTCCA-----CAGCCATCT--------CCCTG-------GCCTCCTCACA-----GGGGTCTTACTG----CCCCATGCACGACACCTTTTTTCT--------------AGCCCCACAGCAGATGGCACATGGTTTGCTCCAACTAGT----AGCACCCTGAGGCCTAGTGCTAGCCTGTGTCCAAGCACT----TAAAGTTCTAGTCAGAG-----GCTAGGTCACATGGGCCCAACTGCATAGCTGATCGGCCC-ACGTCCTGCAAACA-------CGGGTGCCTAAAGGGGCCACTTGTCATTttgatttttgagg a score=29610.000000 s hg15.chr7_random 966888 553 + 1057565 ctgggctgtcccaggtcacgtgg------------caggctggttgcagggccagggaggccc-aggt------------gtcTGATGCATGTCAAAGCTGAGTGGCTGC-GAGGAGAGCTGCACTGCTGCTGAACTCTGGCCTCAGGAGTGACTTAGGGCCCAGCCATCTCTTCTTTGGTAGCTCATGTCACGTGTCCAGGTCCGGGCCCTCCTGCAGCCAGCCTGCACCCCGGATGGCCCCACCCACTCC--TTGCCACACCCACCCTGCCATTTGCCTTGGCCATGCTGAAAGGGAATATTCCGTGCCCATTGT---GCGGAGGCACCTCCTCATCGCTTCCTGTCACCTGCAGGGTGCCGCTGAGCACCGCCTGGAGAAGATCCCAGAGCCCATCAAAGAGGCCACTGCCCTATTCTACGGTAAGGAGAGGCCTGACC------CATGGGAGGAGGGAGGAGGAGGGAAGAGGAGACAGGTGATACCGCCTAAGAACACAGATCCCCAAAGAGTAGTCCCTTCCTCTAAGAAGGTCAGGCCC---CCACGCCTGCAATGCAGCAGCAACCTTCAAAGGG-----------TCGGGTAAGg------------------------------------------------------------------------------------ s mm3.chr5 15850288 528 - 149719773 CTGGCCTGCCACCTGTCCTATGAGGGATGAAAAACCATGCTGGAGAGGGAAGCCGGAAGACCCTAGGTCACAGTAGTAAAGCCT--TACACACCAGGGCAGTGTGTGGCCAGGGGGGAAGCA---GGCTGCCGGACCCCGGCCGCCAGAGCTGCAGTGGGCCCTGTG------------------CACACGCTGTGTCT-GGT----------------CCAGGCCAG--------CAGACTCACGAGCTCCAGCTCCCACAGTGACACTGCC---CACCCTGG---------------AAAGTCC---CCCACCGTGCTGCAAATAAGGCTTATCTTTTCCTTTT-TACCCTGCAGGGAGCTTCCGAGCAAGGCCTAGAGAAGATTCCAGAACCCATCAAGGAAGCTACAGCTCTGTTCTATGGTGAGGA-AGGCCTGGCCAAATAACACTCACCCAAGGAGTTAGGGGCCAAGGAAAGCCCTTGGAGCCTGTTAGGAACTCAGATTCCCAAAGTTTATGTTCTCCCTCCAAGCAAGAAGGGGC----CTGTCCCAGCAATGCAGCCTCTGTCTCTATGGCTTGCCAGTGACCTCAGGAAAG------------------------------------------------------------------------------------- s rn2.chr12 21284898 600 + 46874691 cctgccTGCCACCTGCCGTGTGAGGAATGAGGAGTTGTGCTGGAGAGGGCAGCTGGAAGACCCTAGGTCACAGTAGTAAGGCC----ACACACCAGGGCACAGTCTGTGCAGGGGGGAGCTA---GGCTACCAGA-----------GTGGCTGCAGG----CCTGCC------------------CACACCCAGGGTCT-GATAGAGGCCTTTCTGCAACCAGGCACT--------CTGACTCACGTGCTCCAGGTCCCAC-----------------CCTTGA---------------AAATTCC---CACAATGTG--GCAAATAAGTCTCATCTTCTCCTTCT-TACCCTACAGGGAGCTTCCGAGCAAGGCCTAGAGAAGATTCCAGAGCCCATCAAGGAGGCCACAGCTCTGTTTTATGGTGAGGA-AGGACTGGCCAAAGAACATGCACCCAAGGTGTTAGGGGCCAGGGGGAGCACCCGGAGCCTGTTAAGAACTCAGATTCCCAATGTTTATATTCTCCCTCCAAGAAAGAAGGGGCCTGTCTGTCCCAGCAATGTAGCCACTGTCCCCATGGCTCGCCAGTGACCTCAGGAAAGAAATACAGCAGGACAGCTCCCAGCATCAGAGGGAGAGCCACCTTCTGCAGTGTCCAGGCCAGAACCCAAGGTCCTGGCCAGCCAG a score=3936.000000 s hg15.chr7_random 967599 141 + 1057565 GGTGAATGAGCCCTCAACCTGCCTTTCTGGATCTTAGACTGACACCCCCCACCTTGGGGCCCTGACCCTTCAGCCCTGCCGGTGGCCTGTGAAAGGCTGGTGAGTGGTGGTCAGCCAGGCCTCACTGCCAAAGTGCAGCCG s mm3.chr5 15850816 100 - 149719773 GGTGCTGTGGGCTGCTCCTAGCTCCCCAGAGCCTTCAGCGTGC--------CCGTGTTTCTCTGGCATTCCACCCCCACCACTGTC---------------------------ACCA-TCTCCACTGC-----TGCATTTG s rn2.chr12 21285498 100 + 46874691 GGTGACGTGGGCTGCTCGTGGCTCCCCAGTGGCCTCAGTGCAC--------CCATGCTTCTCTGGCCTTCCACCCTCCTCACTGTC---------------------------ACCA-TCTCCACTAC-----TGCATTTG a score=47760.000000 s hg15.chr7_random 967800 740 + 1057565 GCTGGACTGGGATACTGGGGGTGTGCCCATGCCTCCCCAGTTCCCCTCCTGCCCCTTTGCTTCCCCAGGGGATATAGGCCTAGTCTGACA-GCTGCAAGGGTC--TCAGATTCAAGGACAGAGTGACTGGGAGGGGAGTTCTGGG-CCTGGCCCTCTGACAGCGCAGACGGGGGTGCTGGGCCCTTCCCCAGCGTGCGTATTGTCAGGTCAGCCCCTGCCATCCATTCTCACGCTCCCCGGTTCCCCTGGCTGTCCCCTCCCCTTCCCCGACCTGCCCAGCACCAGGGAGTCAGACACCATGTGGCTTCTACCCCATGGCATTTGGCAGAAATCCCCCAGGGCTGGGGGACCCACCCCAAAGGGCCGCCTGCTGGGTTCCACCTCCTGCCACCCCCCAAGCCACCCTCCTCTACCTGCTAGGACCTGCAGCACCAGCCAGCGGTGCCCTCCCAGAGGGCCAGGTGGATTCACTGCTTTCCATCATCTCCAGCCAGAGGGAGCGCTTCCGTGCCCGGAACCAGGAGCTTGAGGCCGTGAGTCACATCCTTCTCTCCCTGATGCTCCTTGGGC-------CCAAGGACACAGTTG-GGGAACACACAGGCTTTCAGGAGAGAGATGTGGCACAGAC-CGTAAACCTCAGGGGGAAGAGatttgttctgtgcagtcagggagggcttcctggaggaggtcatgccacactgggctttgaaagaag-actcagatgctcacagtagaggagacacggg s mm3.chr5 15850934 479 - 149719773 ACAGATCTTAGAT----GGGGCACCCCCA-----CCGCAGCTCAC---------------------------------------CAGACATGATGCAAGGTCCCATTTAGCTCAAG-------TCA-TGGGAAGGAAATGTTGGGACCTGGCTCTCTGTCAGTACAGATGGGGG-------------------------------------------------------------------------------------------------------------CAGGG-------TACCA-------------CCATGACAC-------------------------------------------------------------------------CCAAGCCGTTTCCTGCGATCTCCTAGGACCCTCAATGTCATCCAGTGGGACCCTTCCAGAAGGCCAGGTGGACTCCCTGCTTTCCATCATCTCCAGCCAAAGGGAACGTTTCCGCACCCGGAACCAAGAGCTGGAAGCCGTGAGTCCCACCCTACTTCCT---GTTCCCCGTAGGCTTCAAATCTGAGGACACAAATGTAGAAAGACATAGGCTTGGGGAAAACA--------ACAGATACTGAACTGGCAATAGGATTAGATGTACTCCATGCAGTT----GAGACTTCCTGGAGGAGGCTGTGCCACTTTGGGCTTT--AAGAAGTATTCACGAACTCAAAGTAAAGAACACTGGGG s rn2.chr12 21285721 474 + 46874691 ACAGATCTTAAAT----GGGGCACCCCCA----ACCGAGGCTCAC---------------------------------------CTGACA-GATGCAAGGCTCCGTTCAACTCAAG-----AGTCA-TGGGAAGGGAATGTTAGG------CTCTCTGTCATTACAGATGGAGA------------------------------------------------------------------------------------------------------------ACAGGG-------CACCA-------------TCCTGACACT------------------------------------------------------------------------CCAGGCCATTTTCTGTTACCTCCTAGGACCCTCAGTGTCATCCAGTGGGACCCTCCCAGAAGGTCAGGTGGACTCCCTACTTTCCATCATCTCCAGCCAAAGGGAACGTTTCCGCACCCGGAACCAAGAGCTGGAGGCTGTGAGTACCACCCTACTTCCT---GTCCTCCATAGGCTTCAAATCTGAGGGCACAAATGTAGAAAGACAC--GCTTGGGGAAAACA--------ACAGACACTTAAACAGCAATAGGATTAGATGTA-TCCATGCAGCT----GAGACTTCCTGGAGGAGGCTGTACCATTTAGGGCTTT--AAGAAGTATTCAAAAACTCAAAGTAAAAAACATTAGGG a score=42034.000000 s hg15.chr7_random 970830 382 + 1057565 GGC---------------ACAGAAGGGGCTCCAGGTAGACGGAGCAGCACCTGTGCCAGCACGGAGGCCTCTCCCCCACCCCTTTCCTTGCCCCTCCCCC---CCCAGGAGAACCGCCTGGCCCAGCACACCCTCCAGGCCCTGCAGAGTGAGCTGGACAGCCTGCGCGCCGACAACATCAAGCTCTTTGAGAAGATCAAGTTCCTGCAGAGCTACCCTGGCCGGGTGAGGGCCCTCCCCTGGCCTCA--------------------GCTCCAGGTGGACCA--GGCAGGGAGAGAGGCCGATCAGGGCTCTGG----AGAT--GGGAGGGTCGGGGACCAAG--ACCTGCTGGGCAGCACTGGGCCCCAGAGACCCCTGAGGCCTTCCGACATCTCCCCACCCACCCACCTGCCTGCTAGCTGCCCTC-- s mm3.chr5 15853429 365 - 149719773 GAC---------------ACAGAAAAGGCCCCAGGCAAATGAAGC----CCT-------CACA------TCTCACCTTTGTCCATCTTTGCCCTGCCCCCATTCCCAGGAGAGCCGCATGGCCCAGCACACCATCCAGGCCCTGCAGAGCGAGCTGGACAGCCTGCGCGCTGACAACATCAAACTCTTTGAGAAGATCAAGTTCCTGCAGAGTTACCCTGGCAGAGTGAGTCCCCCACCCCCACCCCACACG-----TGCTCCTCTTCTTCCCAGAGAAACTATGGATGGCGTG------------------TGGGGCAAGATCAGGGAGCGTTAAGCAGTAATCCACTGGGTGGTCAGCACCAGG-----GGGACCCCCAAA-------GATACACACCTCCCTTCCCACCTGTCAGCTGTCTGCTCCGTG s rn2.chr12 21286803 388 + 46874691 ggctatatatacatgggcacagaaaaggccccaagcaaat------------------------------ctctcttttgtccacccttgccctgaccctattCACAGGAGAGCCGTATGGCCCAGCACACCATCCAGGCCCTGCAGAGCGAGCTGGACAGCCTGCGTGCCGACAACATCAAGCTTTTTGAGAAGATCAAGTTCTTGCAGAGTTACCCTGGCCGGGTAAGTCCCC--GCCCCGCCCCGCCCGGAGCACACTCTTGTTAGTCCCAGAGAAACTATAGACGGGGTGGGAGGCTGTCCAAGCACCTGAGGCAAGATTAGGGAGGGTTAGGCGGTCATCCACTGGTTGGTCCGCACCAGG-----GGGACCCCAAAA-------GATATCCACCCCCCTTTCCACTTATCACATGTCCACTCTGTG a score=1108.000000 s hg15.chr7_random 971212 18 + 1057565 CCTAA-GCCGGGAGAAGCT s mm3.chr5 15853794 19 - 149719773 CATAGTACCTGAAGATGGT s rn2.chr12 21287759 19 + 46874691 CGTAGTACCTGACGATAGt a score=2868.000000 s hg15.chr7_random 972362 103 + 1057565 TGTAAACAGAATTTGGTCCACACTCCAAAAAGCAACCAAGAGAGTGGATCAGAAACTCACTTGCCGAGTTTTTCTGGGCTAGGGAGGCCTGTGCGTGGCTTCT s mm3.chr5 15854015 76 - 149719773 TAAAGACCATCTATAATGCACACCCCAAAAA-CAATGAACAGAAAAGGCTAGAAGCCTGTTTGTTGTG--------------------------GTGGCTTTT s rn2.chr12 21287975 61 + 46874691 AAAAGACCATCTATAATGTGCACCCCAAGAC----------------ACTAGTAGCCTGTTCGTTGAG--------------------------GCAGTTTCT a score=3217.000000 s hg15.chr7_random 972465 91 + 1057565 CTCAGCCCCCAGGCCTCCCAGGGGCCACCCCGTGCCAGGAAACCCTTTCTATGAGTGAGAGAAGAGCGTGGGGCATAGTGGGGCAGGGATT s mm3.chrUn_random 90531818 89 + 117911829 CTCCACCCACAGGAAGTCCTGAGGACACCCTGTGCCATGAAATTCCCTCTATGAATGCTATAGGAGCTTGGGTGTC--TGGGGCTGGGGTT a score=10547.000000 s hg15.chr7_random 972556 174 + 1057565 CACCTCTCCCTCTTCCTTTGGGGCCC----AGCAGCCCCCAGCCCTGTCCCCACCCA-------TCAGAGCCGCTCCTTGGCCACCAGAGGGCACTCAGACTCTGCAAACCAGCCTGGCTCTGGGTGGCCAGCTGGGGGGCGTCTCCTCTCCCAGCTGCCT----GCCTGCTCGCATGACCACCCCACA s mm3.chr5 15854509 166 - 149719773 AAGCT-----GGGATGTCTGTGGCCTTAATAAGACCC---------ATTCCCACCCAAATGAAGCAACAGCCCTCTTTAGGCCACTAGAGGGCACCCGGGTTCCGCAAACCAGA--GCCTCCAGGGG--CTGTTAGGAAAAG---CGCCTCCTGGCTACCTCAGGCCCTTTCCGCGTAGCTAGCTCA-- s rn2.chr12 21288431 158 + 46874691 AAGCT-----GAGACATCTGTGGCCC----AGCGGCA---------ATTCCCACCCAATTGAAGCAAGAACCATGTTTAAGCCACTAGAGGGCACCCGGACTCCGCAAACCAGA--GCCTACAGGGG--CTGTTGGGAAGTG---TGCCTCCTGGGTACCTCAGGCCCTTTCagt----ctggttca-- a score=4508.000000 s hg15.chr7_random 972730 33 + 1057565 CTCCCAGCAAACCCACCTTCCTGCAGCTGCGCC s mm3.chr5 15854747 33 - 149719773 gTTCCCGAAAACACACATACACAAAACTGCCCC s rn2.chr12 21288661 33 + 46874691 gTTCCCGAAAACACACGTACACAAAACTGCCCC a score=36106.000000 s hg15.chr7_random 974792 394 + 1057565 CCCATCCCCACTC------ACCCCCTCCTTGCTCCCAGGGGCGTCTGGTTCTCTCCAACAAGATGGCGCGCACCATCGGCTTCTTCTACACACTGTTCCTGCACTGCCTGGTCTTCCTGGTGAGTGTGCACACGGGCGGGCCAGAGGCACATTCACCATCCCCAGCCCTGACCTCCAGGGCAGCAGGGGCCTGTTACGGTGGCCTGG--CCCCTGGG-------------CCTACCCCAAGCTGCATCTCTAGCTTGCGACCATGCCTCTCCCCTTC--------GAGAGCCTTGGCCCACCCCAGGGACGAGAAGGACCCACCCC---ATTGGGACCTCTGGCCAGGGCACCAGCCGGGCCGCTCCGTGAAAGAGGCCTGGCTGATCACATCTGGGACTGGTCCTGGACGGGCTTCATAGGAAGA s mm3.chr5 15855837 385 - 149719773 CCCTGCCCTACAT------CCCCTTTGTTTGCCTTCAGGGCCGTCTGATTCTCTCCAACAAGATGGCCCGCACCATCAGCTTCTTTTACACCTTGTTCCTGCACTGCCTGGTCTTTCTGGTGAGTGTGCACAC--ATTGGCCA----------CCGTGTCTCCAAGCCT----TTCTGGGTGGCAGAGTGCTGCTACAGTGTAGAGGGTTTCCTGAGCCCTCTACCCCTAACCCCCCG-TGCCATGTCCTCAGCGCTGGCTCACTTCTGTCTCCTCCCCAAGGCTGAGGACTTCAATGCATTCTAGAGAGAAGAAA----CACCCCAATATCAGGCCCCCAGGCTGGAACA-CAGCCAAGCTATTCTGGAGAGGAGGCCAG-------------GGACCCAGGCCTGCGAGGGCTTTGTGGGAAGA s rn2.chr12 21290522 323 + 46874691 CCCTGCCTTACCCACCCTCCCCCCTCATTTGCCTGCAGGGGCGTCTGATTCTCTCCAACAAAATGGCCCGCACCATTGGCTTCTTCTACACCTTGTTCCTGCACTGTCTGGTCTTTCTGGTGAGCACGCACAT--ATTGCCAG----------TGATGCCCCCAAGCCT----TTCTGGGTGGCAGGGCGCTGTTACAGTGTGGAGGATTTCCAGAG-------------ACTCCCTGATGCCACGTCCTTCACTCTGGCTCTCCCCTGTCTC-----------------------------------------------CACCCCAATATCGGGCCCCATGGCTGGGACA-CAGCCAAGCTACTCTGGAGAGG--------------------------AGTCCTGCAAGGGTTTTGTGGGAAGA a score=193184.000000 s hg15.chr7_random 975194 1948 + 1057565 AGTGGGA----AGGG----------------AGCAGGTCTAATGAACTCCACCAAGGGACAGTCACGAAGACTGCACAGA---GAAGGGGCGTCTTGAACTAACCTCCCCAGCTGTGGAGG---------------TGGC--------GTTCTAGTTAGC-GGATAAG---GGCCTCCATGTCTGCCAAGTTGGGGGAGAAGAGGGGTGGAAGGCTGTGTCTCTGGAAGGATCCAGCCTTGGGGTCTCCTGTCCCC-----AGCACAGTCAAG-ATGGCCCCTACAGAGCTAACCTGGGCTCAAGTTCTGACCCCAGGGTCCAGCGGCTCCTGGCCCTTCCAAGGGTTGGCCCACAGTATTAGAGGAGGTGC--------CTCCGTGTCTGGGCCCATCTGATCATCTGCAGAAGCAGTGGGTGCAGGAACATGTCTAAGACCCACCCGCCCCGGAGTCTGGGGCTCGAGAACCTTTATGTTCCA----GGCCAGGCCCAGGGGCCATGGGTGGGCTGCAGGGGTGGCCTTGAGGC-GAACGGGCAGCTCACCGTGTCTCCACCTGGCCAGGTGCTCTACAAGCTGGCATGGAGCGAGAGCATGGAGAGGGACTGTGCCACCTTCTGCGCCAAGAAGTGAGGACCCCCACTTGGGCCCCCCCTCAGCCCCACAG-CGAGCTCCCAGCACCCCC-GCAACACCCCCGAGTTCCTGCCTCATGTCCCCCACTCCTTAGCCCTCCATCACAGCCCCCCATTCTGGCCCTCCCCCTACCCCAACTCCCGG--TATCCACTACCTCCTAGCCCCCACCCCATCACATGGTACACACCCCCCTTCCCCAACACACACACTCGGCCTCAGCAAAGCTTCCCGTGTCCCCCAGGTTCGCTGACCACCTGCACAAGTTCCACGAGAATGACAACGGGGCTGCGGCTGGTGACTTGTGGCAGTGATACCCCGGGGCCTCCCCCGTGA--CAATGACGGCTGCGCCTCCACCCGACTGCTCAA-TGCATCTAATCACTTAGACTCCCCT-----------------------GAAGAATCCCCCATGGAAACTGCCCTTATCCGCTGTCCAGCAGCTGCCAGAGGCCCCAGGTCACCTCGGGTCCCCTTGAAAGAATGTCTCGGTCACATCAGGCCCGCTAGGTCCAGAGAGCGAGCCCCCTATGCCCGGCCAGGCT-AAGCCGCAGAGACCCT---CTCAGCCCCCACCTCAGGTTAGGGCTCTGCCCGCAGCCTGACCTCTAGCCCTGGTGGCAGAGGTCCCTCAGCTGCGAGGCTAATTGGGTGACCACCGATTCCAGCTGCGGTTAATCCAGCTTGGGCCTGTCTGCACTGCGATCCTCTTGGGCTCTCCTAGGATCCCCCCATGCCCCGTAAGAGGTGGAAGACGCTTCCTTCCAGGACAGCAGGCTTTGAGTCCAGCACCCCCAGCCTGCCTTTGCCACCAGCCC---CACCCTGCAGAGTATATGAGGC----TTGACAGAGTCTGCCCCCTCCCCCACTGCA--CCCCAAGAGAGAGAGCCC-CAGCCAGCGGAACAGTTTCTATTACCCCCTCCCTGCCCCCAGACCC--ATGTGATTTCTGCTTTCTTCTTTAGCAAGATATTCTGGTTTCTAGATAAGGAAGAGTCTCTAATGA-GCCCCCGAGCCCCAGTCTCTTCAGACTCATGGATTGGTCTGAGGGGTCTGAACGTCTCCTAGCCAATCAGAACTGGCTGTGGACCACCCTAGCACGGCCACCTCTCAGGGCCACTGGCAGGCCTTCCTGAGTTAGATTTGTAGTTGCATATTTAGCTTTGCACATTTGAAATAAACCACGGTTGCAGCCACCCTGGTGCCCTGTGCTCTGGGAC------GCTG------GAGGGACTG-GAGGCTGGTGGGGATGCCTGCGGTGCCACCCCTGGGAGCTGGGGCTGGCCTCACAGCTGGGCACACAGAACATTCCTCCCCCTCTTCTCATCTCCAGGAATTCCATGAGTACATTCAGAGCTCTGCTGAAACCCAGATC-------CAGTGTC---CGAGT--------------------------------------------GCTTTTGAGAG s mm3.chr5 15856723 1865 - 149719773 gGTGGAAGGTTAAGGCAGGTAAAAA------AGCAGACCTAACTAGATCT-CCAGGGAACAGAC-CATGGGCTACACAGA------GGCCCATGTGCAACT-GTCTACCCAGGTACAGAAACCCTTTATACTCACTTGGCTGAGGACAGTTCAAGGTCACAGGATGAGTGATGCCTCC--ATCTGCCAAATAGAGGGATAGTAAGTGTGGG----------CCTGGAAGGCTCCAGCATCAGAAACCACTGCCCCCTGCTAGGCATAGTGAAACATAGCCC---TATTGCTAGCCTGGGTTCCAAGTCTGGT--------------GTTCTTATT--------GAATATGCCCACAGTGTTAGGAGACTAACTCCAGGAACTCTGTGTCTGCTTCTTTCTAAGCATCTGGGAAGTAGGTTGGCTCAGGAGTATCTCCAAGG-CCATCCACCCTAGGACCTGGGCTGTGGGAACCTTTCTGCCCCACAGAGACCAGGCCTAATGGCCGTGGGT-GACAATAGGAATTGCCATGAGGCAGGCCACATAGCTCATGGTGTCTCTACCTGACCAGGTGCTGTACAAGCTGGCATGGAGTGAGAGTGTGGAGAGAGACTGTGCTGCCACCTGCGCCAAGAAGTAAGCCTGTCTCCT---GCCCACCCCAAGACCTACAGCCAAGCCCCCAGAACCGCCAGCAG-AGCTCCAAGCCC----------TCCCC-----------------------CCTCCCATG-----CCTGCTCCTGCTCCAGCCTCTGGCATAGCTCCCAACCTAGTGTCTCCAGCCC-------TGTAGTCACCCATCTTCTGCA-----------CTGTCTCAGCTGTGTTCCTC--TTCCCTCAGGTTCGCCGATCATCTGCACAAATTCCACGAGAGTGACAACGGAGCAGCAGCTGGTGACTTATGGCAGTGACCCCCAGG---CTCACCGGAGATGTGTTGGCTGCTGCCCCCTCCCCTGTTTGATCAGCTGCTTCTAATGATGTAGCCTTCCCCTCTCCCACTCCCACCCCCCCAAAAAAAAATCCCCCATGGAAACTGTCTCTGTCTTC-AGCTAACAGCTGCCAGGAG-CTCAGATCCCC---AGCTCCTTTCAAAGGTTGTCACGGCTTCATTGGAGCCCTAAAGTTCAAA----CAACCC---------AGCTAGTCTGACACCCCTGAGGCTCCACCCTCGGTCTAGTCACCTGACCTGGGCTCCACCCACATCAGAACCTCTAGCCCTGGTGGCAGAGTTTTCTG-----TGATACATATT--GTCACTACCCAGTCTGGC-----------------------------------ATTTCTATAGCCTCTCTTAGGACCCCGCCACACAATAAAATAGTTGGGAGGCTCGTCT-----AGGCCCCAGGCTTT---------------------------TCATCTGCCCTATTACCTGGCAGGG--CGGGAAGCGGCTTTGATAAAA----------CCTTAACTGTAATCCCGAAGACAGGGAGCCCATAGAGGGCGGGATGGTTTCCACTACCCCTTCCCTGCACCCAGTCCATGATTTGAGTTCTGCTTGCTTCTTTAGCAAAATATTCTGGTTTCTAGAAGAGGAAGTCTGTCCAACAAGGCCCCTGTGCCTCAGGCACCACAGACC----ACACGGTCT--GAGGC---------------CCCAGCAAAACCGATCCTGGGCCACAATAGCAAGGCCAACTCTCAGGACCTCAGGCAGACCCTCCTCTGCTGGGTTTAATCTT----CTTCAGCTTCGCA----AGAAATAAAGAATCATTGCAGCCACAGTGGGGTCTTTTATTCTGTGACTCCTCAGCTGAACATTGAGTGTCTGAGAGACTGGTGGG--TGCCTGCAGCACCTGCCCC-----CTGGAGCTTACCTGGCATATAGGTAGGC------TCTCTCCCATTCTTCCTATCCTCAGAAATGCTATGAGTATGTCCAGAGCATTCCTGGAACCCAGACCAGAGTGTCAGAGTTTGTTGAGTACAGCCCCC-TCCAAACCAGAAATATATTCTTTATTCCCAAACAACCTGTTGGAT s rn2.chr12 21291234 1839 + 46874691 ggtggaagattaaggcagttgaaaactaaaaggtaggcctaactagatcc-ccagggaACAGAC-AGTGGGCTACACAAAAGAGAAGGCCCATGCACAACT-GTTTGCCCAAGTACAGAGACTCTTTATAGT----GGGCTGAGGACCATCCAAGGACACAGGCTGCGTGAGGGCTCC--GTCCACCAAATGGAAAGACA---AGTGTGGG----------CATAGAAGGCTCCAGCATCAGGAGCCACTGCCCCCTGCTAGGCATGGTGAAGCATAGCCC---TAATGCTAGCCTGGGTTCCAAGTCTGGT--------------GTTCTCATT--------GAATATGCCCACACTGTTAGGAGAGTAACTCGAAGAGCT--GTGTCTGCTTCT----AAGCATCTGGGAAGTAGGTTGGCTCAGGAGTATCTCCCAGG-CCGTCCAGC--------TGGGCCATGGCAACCTTTCTGCCCCACAGGGAGCAGGCCTAACGGCTGTGGGT-GACAATGAGAATTGTCGTGAGGCAGGGCAGATAGCTCACGGTGTCTCTGCCTGAC-AGGTGCTGTACAAGCTGGCATGGAGTGAGAGCGTGGAGAGAGACTGTGCTGCCACCTGCGCCAAGAAGTAAGAATGTGTCCT---GGCCTCCCCAA-ACCGACAGCCAAGCCCCCAGAACCCCGAGCAGCAGCTCCAAGCTC-------------------------------------------CATG-----ACTGCTGCTGCTCCAGCCTCTAGCCTAGCGCCCGTCTGAGTGTCCCCAGCCC-------TGTGATCACCCCTCTTCGACA-----------CTGTCTCAGCTGTGCTCCTG--TCCCCTCAGGTTCGCCGATCATCTGCACAAATTCCATGAGAGTGACAATGGAGCAGCAGCTGGCGACTTATGGCAGTGACCCCCAGG---CTCACTGGAGATGTATTGGCTGCTACCCTGTCCCTTGCTTGATCAGCTGCTTCTAATGACATAGCCTTCCCCTT------------CCCCCCACAAAAAAATCCCCCACGGAAACTGTCTCTGTCCTC-ATCCAACAGCTGCCGGAAG-CTCAGAGCCTCTAGAACCCCTTTCAAAGGTTGTCACAACCCCATTGGAGCCCCAAGGTTCAAA----CAACCCCTAGCAACCAGCTAGGGTGGACTCCCTGAGTCTCTGCCCTCGGTCTAGTCACCTGACCTGGGCTCCACCCACATCAGAACCTCTAGCCCTGGTGGCAGAGCTTTCTGA-CTGTGATACAGATT--GTCAGCACCCACTCCGGC-----------------------------------ATTCCTATAGGCTCTCGTAGGACCCTGCCACATAATAAAATAGGTGGGAGTCT--TCT-----GGGCCCCAGACTTC---------------------------TCATCCGCCCTCTTCCCCGGCAGGG--CGGGAGGCGGCTTTGATACAA----------CCTTAACCGCAGTCTCCAAGTCAGGGAGCCC-CAGAGGGCGGGATGGTTTCCACTACCCCTTCCCTGCACCCAGTCCATGATTTGAGTTCTGCTTGCTTCTTTGGCAAAATATTTTGGTTTCTAGAAGAGGAAGTCTCTCCAATGAGGTCCCTGTGCCTCAGGCACCACAGAC-------ATGGTCCCAGAGGC---------------CCCAGCAAAACTTGTCCTGGGCCATGATAGCAAGGCCAACTCTCAGGACCTCAG----ATCTTCCTCCGCTGGATTTGATCTTTT-TCTTCAGCTTCGCA----TGAAATAAAGAATCATTGCAGCCACCATGGGGCCTTGTATTCTGTGACTCCTCAGTTGAACACTGGGTATCTGAGAGGCTGGTGGG--TGCCTGCAGCACCAGGCCC-----CTGGAGCTTGCCAGGCATGTAGGTAGGC------TCTCCCCGATTCTTCCTATACCCAAGAATGCTATGAGTGTGTCCAGAGCTTTCCTGGAACCCAGACCA------TAGAGTCTGTTGAGTATAGCCCCCACCCAAACCAGAAATATATTCTTTATTCCCAAACAACCTATTAGAT a score=18242.000000 s hg15.chr7_random 977494 289 + 1057565 CCA-----------------CCTGTCGGGCTGTGGTTGGGTGTATGACGTGTCTTGG---------------TCCACGTCAGTTCCTGGGGAATCTCTGCTTCCCTTTCTGTGCTCCCC----------------------------TTTCCCATGGGCCCCCGCCTGCCAGGGGCTGCAAAGCCCGTGCCCATCAATCCCC------CTGAGCACCAGCCTCGCATGGGAACCCCCCGAGACACAGGTTCTGGGCCACCTCACCTCCAGCCCAGCCTCAGATAGAGGAGCGCATTCTCTGGGTCTGGAGTGGGTGCATTAACTCATTGTCCAGCTGTCACAAGACTGGCTGCAA s mm3.chr5 15859014 255 - 149719773 ACAGAGTACTCATCAGTTAGTCAGACCAGCCATGGCTGAGGGCCTGACGTGTCCCAACAGGCTCATGTCACCTCCCTGTCAACTTCTGGGGAGTCTCTGCTTCTATTTCTTTGTGCCCCAGAGCTATGTATGAAGCGTGCATCTTTTTTTTTCTTGGGTCCCTGCTTGCCAAATGTACCAAAGCCA--TCACA-----CTCCAGCAATCTGAGAACCAACTT----------TCCCCAG----------TCTGTCCCA------------------CTCACAAAG-------------------------------------------------------CAAGACTTACTGGGA s rn2.chr12 21293426 253 + 46874691 ACAGAATACTCATCAGTTAGTCAGACCAGCCATGGCTGAGGGCCTGACATGTGCCAACAGGCTCATGTCACCTCCATATCAGCTCCTGGAAAGTCCCTGCTTCCATTTCTCTGTGCCCCAGAGCTATGTGTGAAGCATGCCCCTT-------CTTGGGTCTCTGCTTGCCAAATGCACCAAAGCCA--TCCCATCATCCTCCAGTGCTCTGAGAACCAGCTT----------TCCCCAG----------GCTGTTCCA------------------CTCACAAAG-------------------------------------------------------CAAGACTCACTGGGA a score=104005.000000 s hg15.chr7_random 977818 1065 + 1057565 TCCCCTGTGCTACCTCTGTCTCCATTTTAGTTCTGAACAGTCTAAAGCATGTGTATCCAGGGG---CCTTTCTTTGGGGTCC-CCGTCCCAGCACCCCTCATC---TCCCCCATGAGGACTTCTTCCAAGCCCCTCAAGCCTCCTGCCCTCAGGGACCCAGGATGGACCTTTCCTCCCTGACCTTCATTCCTATCCCCAGCGAGGCGACAGCTGCTCTTGGCCAACCACGCCCCCTCCACCCCCACAGCCACTTCCACATCTCC-ATCAGTTCCTCCTTGTGGGTCCGAGGCGCTCTGCCGCCGGCCCCTCCTCACTTCTTCCTCCCTGGGGATGGATCCAAGCTATTGTCCTGCCCATGGCTTCCCATCTCAGGACGCTCTCTGGCCGCTATCATCCCAGCAGTGGAGTTCAGCCCACTACTCTGAACCAGGTTAGTCCACCGCGGGTCAGGCTC------TCCCCTCTCCC---------GGGAGGGTGGAGACCACAACCAGGCCATGTATGGAGCTTCCCTTTCTCCCACTCTAGGGCACCCCCTCCTCCCCCTTCCCGGCCTCATTCATAGGTG--TCCTGGTTCCCAACCAGGCGTGCAGGCCTGTGTGCAGCTCCGATCGAGGGCTGGCCCACTGCCGAAGCTTTCATTAAAGTGTCTGCTGGCCTGGTCCTGCGGAGGGAACAGAGCCGAGA--------TGTGGGGCAGGGA----------------------------AGGGGTCTGCCTGTCTTCCGTGCCCCCGTGGAGGGCAGCACCGGGGTTTTGGGCA-----------GCAGGTGAAGGCTCTGTCCCCTCCACCTTCAACTCTGGAAGCCCCACCTTTCCATCCCTAAGAAGGGTTTGATAAAAACCCTTGTCTGTAAATTAGAGATGGGAAATGGCTCTGGGAAAAGTCAGAGGTCA----GTTTGGGCCCGGGAGGGCGACAGATGGAGGCAGCTCCGGCTGGCAAGGAGACCAGGACAGAACTGCCAGAGG-----------------TGGGGGCAGGGGACAAGGAGGGAGATGAGGGGAGAAGACACCCAGGGGTCCCCCCCTGCTATCTCCAGGAGCAAG--ACTACTCTCTTCTC-TGAGCGGCCCTTTCCACACCTCTG--------------CCCCCA s mm3.chr5 15859607 1037 - 149719773 CTCACTGGGCTATGTCCATGTCAGGTTTAATTCCAAGCTTTCTCTGATCTCTGCATCCAGGGAGGCCCCTCCTTCAGAGCCCACCATAAAAGCACCCCTTATCATCTGTCCTAGCTGATTTTCCTCCAAGGCCCCAAAGTCTTCTATCCTCAGGGAGCCCGGATGCACCTGTCACCCTTAAACCTCATTCCAATCTCCA------TGACAGCTGCTCTCAGCCAATCA-----CTGCCACCCTC-------CTTCTATGTGTCCTGTCAGTTCCTCA-TGTGGGTTAGA---------------CTCACTCCTCACTTCCTCCTCT-----GAGAGATCAGAACCATTGTCTTATTCTGGGTTTCCCATCCCAGAATCCTCGCCAGTCACTGACAGCTCACCATTGAATTT-AAGCCACAACTTAGATCCAGGTAAGTCCTCT----TTCATGTCCCCAGCATCCCATCTCCCTAAGCAGTGGGGACAGTGGGTTCTATAGCCAGACCACCCAGGGG--TTCAGTTTCTCTCT--------CACCCCTATACTACCCTTCCTGAC--------TGGGAACCTCCTGGTTCACAGCCA----------------CATGAGTTCAATCAATGGCTGGATTCCAGCCTAAACTTTCATT-AAGTGTTTGCTGGCCAGGTCT------AGAGACAGGGCAGCTGCTGGTCCCTGTGTGGCTGAGAAGAAACAGGTACCCAGGCAGGCCTCAACAGAGGTCTGGCTGGTTTCGGTGGCCCCCAGCA----AGTTCCCATGTGCTCAGCACACCCCATCTCTCCAATGTCAGCCCAGTTCCCCCAGCCCC---------ATGCCACCCCTGCTGCTTCCTGGAAAATAATCAGTGAATCTGATTTCCTGTGAGT---------GAAAGGACTTT-ACAAAGGTCAGAGGCCACCCCGTGTGGG---AGGAGGGCAGCAGATGGAGGCACTCCAGGCAGATCACAGCCTGAGGTCAACACAGACAGAAG------------TCTCCCTGAAATGGGGAGCAAGGAG------GAGAGGAGAGCAGGCCCAAGGGACCATATCCACTG----CAG----AAGCCACAGGCCTCACCTC-TGAGCATCCCCTCACACACCTGTGGGGTTTTGTCGTTTTTTTCG s rn2.chr12 21293999 1041 + 46874691 --CACTGGGCTAT-TCCATATCAGGTTTATTCCCAAACTCTCTCTGGGCTCTGCATGCAGGGAGGTCCCTCATTCAGAGCCCACCATAA--GCACCCCTTATC---TTTCCTATCTGATCTTCCGCCAAGGCCCCAAAGCCTTCTACCGTCTGGGAACCCGGATGCACCTGTCACCCTTGACCCTCATTCCAATCTCCA------TGACAGCTGCTCTTAGCCAATCA-----CCGCCACCCTC-------CTTCTATGTGTCCCGTCAGTTCCTCA-TGTGGGTCCGA---------------CTCACTCCTCACTTCCTCCTCT-----GGGGCATCAGAACCATTGTCTGATTCTGGGTTTCCCATCCCAGAATCCTCGCCAGCCGCTGACTGCCCACCATCGAATC--AAGCCACAACTTAGA-ACAGGTGAGTCCTCT----TTTATGCCCCCAG-ATGTCATCTTCGTCAGCAGTGGGGATGGTGGCTTCCACAGCCAGACCACCCAGGGA--TTCAGTTTCTCTCC--------CATCCCTATCCTACCTTTCCTGAC--------TAGGAACCTCCTG-TTCACAACCA----------------CACAAATCCAATCCATGGCTGGATTACAGCCTAAACTTTCATT-AAGTGTTTGCCTGCCAGGTCC------AGAGACAGAGCAGCTGCTAGTCCCTGTGTAGCCGAGAAGAAACAGGTACCCAGGCAGGCCTCAACAGAGGTATGGCTGGTTTCAGTGGCCCCAAGCA----AATTTCCATGTGCTCGGCACACCCCACCTCTCCAGTGTCAGCCCAGTTCCCCTAGCCCC---------ATGCCACCCCTGCTGCTTCCTGGAAAATAATCAGTGAATCTGAGTTCCTGTGAGT---------GAAAGGACTTT-ACAAAGGTCAGAGGCCACCGTGAGTGGG---AGGAGGGCAGCAGATGGAGACACTCCAGGCAGATCACAGCCAGAGGTCTACACAGACAGAAGAATGACTGCTGACCATCCTGGAATGGGAAGCCAGGAA------GAGAGGAGAGCAGATCCAAGGGACCATGTCCACTG----CAGAAGTAAGCCACGGGTCTCACCTCTTGAGCATCCGCTGACACACCTGTAGGGTTTTGTTGTTTTTCGC- a score=248324.000000 s hg15.chr7_random 978883 2106 + 1057565 CCGAAGCCCTCCCTCCCCTCTCAGACCCC------TTCCAGGCCTGCTGAGCCCCCTGCACCTCTTTCAGGAAGCCTCCCAGAGCCCCCGCGCCGTGCCCTCAGCACCAGGGGTCAGGCTACAAATGCCCCGCAAAGCCCAGCGGGACTGTTTCCTCAGCCCCACTGGTCTCTGCCCTAAAGCAGGCGAGTTCTGGAGCCAGGCAGGGGTGAGGAAGGTGCCAGGGTTGTGGCCCCTCATCGCCCCTCTATGATCTCTGACACCTCTCCGGGTGGCATCAGGCCCCCATCACAGCGAAGGCTGGGTGGTGGGGGCACTGC---GCTCAGGGGGGCCGTCCC-GCCCTGTGGCCCGGGGGCGATTTCCCGCA-CCGGAGGGCTGCAGGG----AGGGGGCGTGG---TGGCGCCCTCGAGATTTATGAGAACCAGGCGTCGACTTCCTCCGTTGCGACATCCAGGCCTCCTCCAGGCTCCCATTGTCCCTGCTGCGGAGAGTCTGGCCAC-AGCGGCGGCTCCCGCGAAGCACCCG-TCAGCGAGGGGCGCTTCGAGGGCGTCCGCGTCCCATAC-ACCCGCCACGCAGGACATTCCCCCGGCCCCACGCTCCGCGCTCCCGGGGCCACCACCACCGCGGGCTCGAGGGGTGGCCTCCACGAGGAGGAGTGGGAGTCCCGCGCCTGGCCTGGGGCCGGCTCGGCGACATGGGGACCCCCGCCCAGATGGGGCGACTCGGAGCCGGCTCCTAACCCCTCTCTCCGGGCCCCAGGACCGGGCAGTCTCGGCACCGCAGCTGCGGGGAGCCAGCAAGCACCGGCCACCGGCGCCGCTCGGGCTCCGCGGATGGC--CGGGGGCGGGGCCTG--------------AGCGGCGCAAGTgg------------gggcgggagg--------gggcggggccaggacgcgcgagggggggcggggccggggctcgcggcgggggcgggggcggggcggggccgggAggcgcgcgcctcgcgggcgg-----------aggggcgcgccgcgc-TGGGGCTGGGCTTGGAGCGCGCGGAGCTCGGCTGC----------AGAGAGCCGCGCGGGGA-CGCGCCGGGACCGCCAGGAGC-------------------------------GCAGGAGCCT----TCGAGG-------------CGGTGAACGAGGGAGGGAGCCCAGTCCGCGCGGGCCATGAGCCACCGGGCCCGGGGAGCCCGGCCGCGGTCCGGGCAGCGCTCAGCCGGCGCCCCAGCCCGCTCGGCCGCAGCTGCGCGCCTGTAGGTATGGCCTCCTTATACCCAATTCCTCGCTCCC-TGGTCCTT-----CCCCCGGGACCCCTGTCTGTCCCCGGGGACGTGC-------------------------------------------------------------------------------------------GCTGTGTGCGCACCGCTGCCCGAAGGAGAGCGGCCGCACGCGCCTTGGTCCGCGCGTGTCGTCTTTGTGTGCGCGGGTGGGAGGGAGGAGGGCGCGCGAGGGA-GGGGAGGCGCCCCCGGCTGGGATCTGCTCCCCGATCCCCATCCCGGGCGGGGCGGGGAGCCTCTGGA----GGGGCCGA--------GCCGCCTCTGGAGCATCTGCGCCCCCGCCCCCTGCTTGGGCCCCGGCCGGGTAGTGTGGCGAGAGCATCCGGGTCCTTAGAGGAGGGGTCTC--TGGT-TGGGGGAAGGGGTGCCCAGGTCTCTTCCCTACTCTGGGAGCGCTTGGAGGGGGCGTCAACCTAGAA-GAGGGTGAGGGCCACGGGATGGGATCG-----------GGGAGGACCTCCTCCAGGCCACAGGCACGCCCTCCCTTTGGCCCAGGCCCCCCT--------------TTCTCGACCTGCCCAGCCGGGGAGCTCCCCGGAGC--CCCCGA--TTGCCGGGAGGATCGTGGAGGGTGCCCAAGAGGCCGGCGCCTTTAAGAAGGGGCGGGTTCGTGCCCTCCATTCAGGCCCTTGGGCCTCGGCCATTGATGAACCTGCG-GCTGCGCGGGCCGGAACCGCGCCAGCCCAGCGGGCTGAAGCCGGGCAGAGGCAGGGACGCATCCTGGCC------CCCTGCAGCCCCGAAGTGGGGGCCTTCAGGGAGG------------GAAGTCTGCAGTGACTGGAGCCTCTCAGGAGCCACGCAAGGCAGACCGGGCAGCCCCAGGCGAGACTCTGAACACGAATAAGCCAGGATCTACGTGCACTTCGAGCTAGTGCAAGGGAGAGCCTCAGGCTAGGCTGTCAGACCTGGGTGGAGCCCTACCAATGCCCC s mm3.chr5 15860752 2062 - 149719773 -----cTCCTCCCCGCGCCTCTAGTCACCAGGTTATTCCATCTCCTCTGGTCTCTTTAC----CCCTCGGGATGC--CCTAGAGC-----------GCCACCAG----AGAAGTCAGGCCAGG---------CAATACCTAG---------------------------TTCTG---------------GTTCTGTCGCCAACCCAGAGTGAGGACTTCG-CAGAATCCTGG-----------------ACGACCTCAGACACCTCTCCTGGTGGGACCAGAGT------------AAAGCTGAGTGGGGAGGAC-CTGT---GTGTAGGAGCTCTTCCCCAGATCCGAAATCC-TGGGCGGTTTCCCGCACCCCGAGGGCAGGAGGAAGACAGGGGGCGTGGCTCTGGGCTCCTGGATGT---TGAGAACCAGACAGACATTTCCTTGGTTGCGACATCTGGACCTCCTCGAGGCTTCCATTGT-CCTCTGGCGGAGGGTCGGCCTAC-AGCGCCCGCCCCTGTCTGACTCTCAGTAACCCAGAGACATTTATAGGGTGTCCACGCCCGGGGTGACCCATCACGTAGAACATCCTCCAATCC----------TGCCCTTGGGG--GCCACCACCCTGGGCTTCGGGAGACGCTCCCAC----ACGAGAGGGATTCCTTCGACTGGCAACGAGAC---------------------------------------------------CTGGGCACC------CGGGTC--------------TTTCTGCTCAGCCACTGTCCGGAGGAAGACAGAGCGGTTAGCCGGCGCCActggggctccggagagagagccggggttgggggttggggaaggacttgggagcgtggctagtggctcgcgccgcgtgggcggggggtgcggcaaaggaggggcctgaa-----gcgggggggcgtgt--------tggggcggggctagtggtggggcggggCCCAGAGGCGCGCGCTGCTCAGGCAAGGAGGAGGGCCAGGGGCGCGCGGCGCGCGAGTCTGGGATCGGAGCGCGCGGAGCTCGGGAGCCTGAAGAGGGAGAGAACCTCAAGGGGGCCGCACCAGGACCGCCAAGACC------GCCTCGCAAGCTGCAGGCCAGGGAAGCGGGAGCCA----CCCCCGCTGCCGCCGCCACCGGCCACCAAGGGCGGAGCTACGGCCCG-GAGGGCCATGCGCCACCGGGTCCGGGGATCCCAGCCGCGGTCCGGGCAGCGCTCCTCCGGCGCCCCAGCCCGCGCGGCCGAAGCTGCGCGCCTGTAGGTACGGCCTGCTTGTTCTCAGCTCCCTGTCCCCACGGTCCTTTACTCTACCCGGTGCCC--AGCTGTCCCCGAGGgtgtgtgtgtg------------------------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatgaggtgtgt-----------ggtgtgtgCTCACCGCCTCCCCGGGAAGCGCGGTCGCACGCGCCCGGGTCCGAGCGT---GTCTTTGTGTGCACCGGTGGGAGGGAGGAGGACGCGCGACAGAGGGGGATGAACCCCT--CTGGGATCGGATCCTAGACCCACTGCCCAGGAGAAGTGGAGAGTAACGGGAAGCTGAGGTGGGAGAAAGAAGCCACCTCTGGAGCAGCTGAGCCCCTTTCCCCTCATCAGACCCTGGCTGGTTGGAGGGGCGAGCGCAGCTGGTCCTCTACAGGAAGGGATCCGATGCT-GGGGGGAGGGGACGTTCAGGTCTCTTCCAGGGTCTGGGA------GGAGGTGG-GTCAACACAGCATGAGGGTGATGGCTACACGCTGGGGTCT-----------CGCTGGGCCACAGTGACCCCGTGGGGACACTCTCTTTCCGGCCCAGGCCCTCTTTCCCACGGCCACTATTCGTGACCCGCCCACTCTGGAG---CTCCGGAGCAGCCCCGGGTTTGAGAGGAGGATCGCCGAGGGTGAC----AGGCCGGCGCCTTTAAGAAGGGGCGGGTTAGTGCCCTCCATTCAGCCCCTTCGGCCTAGGCCATTGATGAACCTGTGAGCTGCGCGTGTAGGAAACGCGCCAGGGCTGCGGGCCGGAGCCAGGCAGAGGCTGGGACGCGCCAGGGCTTTCCTACCCTTCCACCCTCGCATAGAGTCCCTCAGTGGAGTCTTTGAGGTCAGAAGTCTGCAGTGATCGGACAGTCGCA--------------------GGGTATCCCCCAAAGAGGCTGTGAACGTGGGTAAACCAGAGTCTA-GTTCAC-CAGAGGTGATGTAGGG----------GGTGGGGCTGTCAGACCAGTGTTGAGCTTCATCTCTGCCCC s rn2.chr12 21295151 2103 + 46874691 -----cTCCTCCCCATGCCCCTGTTCTCCAGGACATTCCCTCTCCCCTGGTCTCCTTAC----CCTTCGGGATGC--CCTAGAGC-----------GCCACCAT----ATGGGTCAGACCAGG------------GACCTAG---------------------------TTCTG---------------ATTCTGTAGCCAACCCATAGTGAGGATTTCA-CAGAGTCCTGG-----------------ACGACTTCAGACACCTCTCCTGGTGGGACCAGAGT------------ACTGTTGGGTGGGGAGGAC-CTGTTGGGGGGGGGGGTTCTTCCCCCGACCTGAGATCC-TGGGCAATTTCCCGCACCCGGAGGGCAGGAGGGAGGCAGGGGGCGTGGCTCTGGGTCTCTGGATGT---TGAGAACCAGACAGACATTTCCTTGGTTGCGACATCTGGACCTCCTCGAGGCTCCCATTGT-CCTCCAGCGGAGGGTCGGCCTACAAGCGCCCGCCCCTGTCTGACTCTCA-TAACCCAGAGACATTTATAGAGTGTCCATGCCCATGGTGAC----CAAGTAGAACATCCTCCAAT--------------------------CCACCACCCTAGGCTTCGGGAGATGCTCCCAC----ACGAGAGGGACTCCTAGGATTGACCACGAGAC---------------------------------------------------CTTGACACCCCGGGTCAGGTC--------------TTTCTGCTCAGCCACTGTCCGGAGGAAGACAGAGCGGTTGGCCGGCGCCACTGGGACTCCggagagggag-tgggggtgggggttgggggagggcttggaagcgtggctaaaggctcgcgccgcgtgggcggggggtgcggcaagggagggacctgaa-----gcgggggggcgtgg--------tggggcgggactagtggtggggcggggCCCGAAGGCGCGCGCTGCTCAGACTAGGAGGAGGGCCAGGAGCGCGCGGCGCGCGAGTCTGGGATCAGAGCGCGCCGAGCTCCGTATCCCAAAGAGGGAGAGAACCTCAAGGGGCCCGCCCCGGGACTGCTAAGAGCGCACGAGCCTCGCAGACTGCAGGCCAGGGAAGCGGGAGCCAGCCCCCGCCGCCGCCGCCACCACCGGCCACCAAGGGCGGAGCTACGGCCCG-GAGGGCCATGCGCCACCGGGTCCGAGGATCCCGGCCGCGGTCCGGGCAGCGCTTCTccggcgccccggccggcgcggccgAAGCTGCGCGCCTGTAGGTACGGCCTGCTTGTCCTCAGCTCCCTGTCCTAAGGTTCCTT-----TACCCGGTGCCC--AGCAGTTCCCGAGGGCgtgtgtgtgagtgtgattgtgatcgtgtggttgtgtggttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTAAGGTGTGTGCTCACTGCCTCCCCGGGAAGCGCGGCCGCACGCGCCTGGGTCCAAGCGT---GTCTTTGTGTGCACCGGTGGGAGGGAGGAGGACGCGCGACAGA-GGGGATGAACCCCT--CTGGGATCGGATCCCAGACTCACTGCCCAGGAGAGGTGGAGAGTAACGGGAAGCTGGGGCGGG-GGAAGAAGCCACCTCCAGAGCAGCTGAGCCCCTTTCCCCTCATCGGACCCTGGCTCGTTGGAGGGGCGAGCGCAGCTGGTCCTCTACAGGAAGGGATCCGATGCTGGGGGGGAGGGGACGTTCAGGTCTCTTCCCGGGTCTGGGA------GGAGGTGG-GTCAACCCAGCATGAGGGTGATGGCTACACGCTGGGGTCTAGAGAGACCCCAGCGGAGCCACAGTTATCCCGTGGGGATAC-CCCCTTAAGGCCCAGGCCCTCTTATCCAAGGCCACCATTCGTGACCCGCCCACTCTGGAG---CGCCAGAGCAGCCCGGGTTTTGAGAGGAGGATCGCCGAGGGTGAC----AGGCCGGCGCCTTTAAGAAGGGGCGGGTTAGTGCCCTCCATTCAGCCCCTTCGGCCTAGGCCATTGATGAACCTGTGAGCTGCGCGTGTAGGAGCCGCGCCAGGGCTGCGGGCCGAAACCAGGCAGAGGCTGGGACCTGCCTGGGCTTTCCTACCGTTCCACCTTCGCTTAG-TCCCCTAAGTGGAGTCTTTGAGGTCAGAAGTCTGCAGTGACCGGAGAGTCGCA--------------------GGGTATCCCCCAAAGAGTCGGTGACCAAGAATAAACCAGAGTCTA-GTTCGC-CCGAGGTGAGGCAGGG----------GGTGGGGCTGTCAGACCAGTGTTGAACTTCATCTCTGCCTC a score=23396.000000 s hg15.chr7_random 981453 393 + 1057565 TGAATGCTTCTAGGTAATCAAGGGTTAATGCACACGCTTTTCTTTT-----------TACCCTTGTTGTGA--AAAATCTGTCTGAAGTTTCTAAATCCCTCTTCCCTACTTAGCGTGAATCTCCTAGGGAGGACTTCTATAC----------------------------------------AAATACCCAGGGGTGGGCTTCCCTTGGGGGT-------------------------------------------------CTTGGAAATGGGATCTCCACCCAAGTGA-TCTGGGCCTCCCAGGC-TGAGCTT--TTGGTTTCAAActtacttgtgccaagctaagggcatcaggatcgccgttcgtgtcatctttacaacaatcctgtgggtttagtgctattattatccccacacacttagggaggggaagtgactggcccaaagtcccgcagtcaacaagcc--aggcctcccaaccactcctctct-----------gacaagag s mm3.chr5 15863934 383 - 149719773 TGAGCAGTTTTGGGGAGTAGAGAGTTAATGCTCACACTTTCTTTCC--------------CCCAGTTGTGAAGAAACTCTTCCCAAAGCTTCTTAGTCCCTCTTACCTACTTACTAGGAGTC-CCCAAGGAAGACATGGA-AC----------------------------------------ACACACCCAGggaagag--------ggggagggaaggaggatgggagggagggagggggaggggagagggagAGGAGTGCTGAAGGTAAGGGACAGCTAGCCAGTGGAGTCTCTGCCTCCCAGGG-CTAACTAACTTGATCTC-AGCTGACCTGTGCCAAACTCTGAGCAT---------------TGTCA----CAAAACAA--------ATTTAG-------------------------GGGACGTAGAATGATTTGCCCAAAGTCACTCAGTCCCCAGATCAGAGACTCCCAAGCCACTTCCCCTG-----------GGCAAGAG s rn2.chr12 21298187 391 + 46874691 TGAACAGTTCTGGGGAACAGAGAGTTAAAGAACACACTTTCTCCCCGCCCCTCCCCACCCCCCAGTTGTGATGAAACACTTTCCAAAGTTTCTTAGTCCCT--TACATACTTACTAGGAGTC-CCCAAGGAGGGCTTGGA-acacacacccagacacacacacacacacacacacacatacacacacacacaGTACCGAA---------------------------------------------------------------CGAAGGCAAGG-CCATCCAGCCAGTGGAGTCTCTACCTCCCAGGGGCTAGCTTAATTGATCTC-AGATGACCCATGCCAAGCTCTGAGCAT---------------TGTCA----CAAAACAA--------ATTTAG-------------------------GGGAAGTAGAATGGTTTGCCCAAAGTCTCTCAGCCCACGCGTCAGAGACCTCCAAGCCACTCCCCCTCTCCCCCGCCCCGGCAAGAG a score=47877.000000 s hg15.chr7_random 981851 775 + 1057565 cacttcttgccctgcctaccccccctgGGT----TGCAAGGAATTGGGGGTTTAGGGGCTTCAGGCCTCCTGGCTGCTGTCTTCCCGGGG--------------------------CTACG----CTCATTCTTACTGTCCAAGTGAGGCCAGGGGACTGGTCAGAGCCCTGGGGCCTGGGGAGGTTTCTCTTCCCTGCTCACCTGGCTGGGTGCCGTTTTATGGCTATGCTCTGTCTAGGGGGATAGCAGGTGTGACCCCTCAACACGAGGTCACAGCCCACACCTGTTTGGGCAGAGCAAGGCA-GGGCATCGCTGTGTGGGCGTGCAGCATCTTTTGGTTCCTCTGGGTGAAGCAGG-GTTTGGGCCCCATTCTCCACATACTTCCGGGCCATCTGAGGGTAGCGCCCACCTGGGGGGTGGGGAGGACAACCAGCCAGGAGCTCACGGTTCGGTGGAAGAGACAGGCCACAGCCATGTGGTGTGGTGGAGGGGCAGGG----GGCAAGGGTGGAGGTGGGAAGAGGATCAAGGGGCGTTCCCGAGGCCTCTGTGGGCTTGGGGGCCTGCCTGCTATTGGGGCAGAACAGGGGAAGTAG---------GCAGTGCCCAGCTGGGTGCTGAGGCTCTGTGCAGAGGACAGGCAGGAGTTGGAGGAAGAGGATGTATTTGAACTTGGATGTGGTGAGTTTGAGGTACCTGGAGATCAGCCAGGCTGGGAGTTGAGCTCAGAGAAAGGCCCAGGGAAGCTTTATTAGCACCTGTAGTCTCCAGAGTTCGGGGATGCTCAGATCTTAGGGGTGCCACCAGAGGTCT s mm3.chr5 15864876 621 - 149719773 TATTTCTCGCATGGTCCCCTGAACCCTGGCAAAGTATAAGGGA--GGGTTTTCAGGTGTCGTGAACCTCCAGGCTGCAGTCCCCATGGGGGGAGATTTAATTAGTCTTCGAGCCTGCCTCGCTGTCTGTCTCTGACTGTCCATGTGGGGTTACAGGGGCTGCCACAGACCCAGCTTCTAATGGAG--TCTCTTTCGATCTCACCTAACTGCGT--CTTTTTACGGCTGTGTTCTGTCCCCAGGGACGGCAAGTGTA--TCCTCGGTATGAATTCA-AGCCCACACCTTTCTGGGCACTGTGA-GCA-GGGCATGGCTGTGTGGGAGTGTGTTGTTTTTC--TTCCTCTGGGTGAAGTAG--GTTGGGG--------TGCAGGTGCTTCTCAGCCCTCTGATGATA--------------------GGGAGCAAGTCATCTGTAG-TCACAGTCTGGTGGCGGAGA-GGGCACAAACCACA-GGTGTTATA--ACAGCAAGG-------------GGAG--------------AAGTGGCTCTCC--AGTTCCCTGCAGGC------------------ATCAGGCAGATTA---------ATTAGCATCTGCAGCACCCAGA-----ACTGA----------AGAGGTCA--CAGGAG--GGAGG----------------------------------------CCTCAGGAATCATTCATACTGTGTG------TCAGGAAAAG-caca---------cattcacacacacacacac------------acacacaca------------cacaACAGAGCA s rn2.chr12 21299086 627 + 46874691 TACTTCTTGCATGGTCCCCTGAGCCCTGGTAAAGTGCGAGGGA--GGGTTTTCGGGTGCTGTGAGCCTCCGGGCTGCAGTCCCCATGAGGGGAGATTTAGTTAGAC----AGAT--CCTCGCCATCTGTCTTTGGCTGTCCATGTGGGGTTACAGGGGCTGTCACAAACCCAGCTTCTAATGAAG--TCTCTTTCACTCTCACCTAACTGCGT--CTTTTTATGGCTGTGCTCTGTCCCCAGGGACAGCGAGTATA--TCCTCAGCCTGAATTCA-AGCCCACACCTTTCTGGGCACAGTAA-ACAGGGGCATGGCTGTGTGGGAGTATGCTGCTTTTC--TTCCTCTGAGTGAAGTAGGTGTTGAGGGTGAACTCTGCAGATGCTGGTAAGCCCTCTGAGGATA--------------------GGGAGCAAGTCATCTGAAG-TCACAGTCTGGTGGAGGAGACGGTCACAAGCCACA-GGTGTTATCCTAGAGCAGGGTAGAGGCAACCCAGGAG--------------AAGGGGCTCTCC--AGTCCCCTGTAGGC------------------TGCAGGCAGATCAGCGGAAAGGGTCTGCATCTGCAGCACCCAGA-----ACTGA----------AGGGGTCA--CAGGAG--GGAGG----------------------------------------CCTTGGGGATCACTCGTACTGTGTG------TCAGGAAAAG----------------------------------------------CGCACGCA------------CACAACAGAGCA a score=21955.000000 s hg15.chr7_random 982626 342 + 1057565 CAGGAGGCACTGGTATGAGTGTCCTGGAAAAGCCAGAAGGCAGCTGGGTGGGATGAGTTGGTGAGGGGCACTAAGGGGGTATCCTGCAGGTTTAGGGG-GCTGGGCCAAGGCCCATGTGAGAGTTATGACACTGGGGGAGTGGAA-----GGGGCTGAGTGTCTCAGGCCAAGGCTGGAGATGGGAGGGGGGAACCTCTGCTCTGCAA----------------CCCCAGA--------AAGGCAG-GGTGGGGTGGGAGTAACCAGGG---CCAGTGCAGCTGGAACCAGCTCAGCCTGTCCTCCACCTGCAGAGCCCATCCAGGAACTGTCCAGCACTGGGTGCTCCTGAAGGAGGCTGAGTCTGCCTCTTGAG s mm3.chr5 15865746 320 - 149719773 aAGTacacacacacacacacacacacacacacaca----------------cacaAACTGATTAGCAGGCAGAGGGAAGCACCTTGTAGGTCTGGGGGTGCTGGGTCAAGTTCCAAGTGCATCACATGACACTGGAAGTGGAGGA-----GATCCCTAA-GCCCTAAACCCAAGCCAGATCTGGGC------TACCTCTGCTCTGCAGTACCTCCCACCCTCACCCCCACCTCCCCAAAAAAGCAGTGGTAGGGTGTGAGG----AGGAGCCCTGGTTCAGCTGGAGCCAGCTTAG------------------------TTGGGGAGCTGTCCAGCACTGGCTGCTTCTGAGGAAAAATAGAGCAGCCTTTTGAG s rn2.chr12 21299926 280 + 46874691 gagtgcacacaC------------------------------------------------GGTAGCAGGAAAAGAGGAACACCTTGTAGGTCTGGGGGTGCTGGGTCAAGTTCCAAGTGCATCACATGATACTGGAAGAGGGGGACTCCTGAACCCTAG-GCCCTAAGCCCAAGTCAGATCTGAGC------CACCTCTGCTCTGCAGTGCCCCCACCCCCCAGCCCCAGT--------AAAGCAAGGGTAGGGTATGAGG----AGGG---CTGGTTCAGCTGGAGCCAGCTTAG---------------CAGGGTT--TCGGGGAGCTGTCCAGCACTGGGTGATTCTGAGGAAAAATATAGCGG--------- a score=26028.000000 s hg15.chr7_random 984521 627 + 1057565 GTCACAGCAAGTTCAAGGGTTAAGTTAAGACCAGAAGCCATGCCTACTTTGCCTTCTGCCGGGGTGGTGGAGTGAGCTCAGATATTCTGGG-AGGGGAGAGTTGGGGAATTCCAGCCACA-------TCTGGCAGGAGGCCCTGGTTCAGAGCCTACCTTGTGGGGATGTGGTCTCTGCGGAGGTGAGCAGTAACACGGGCTTGAAAACCAACGCCCACGTATTCAGCAGTGAAGCAGAGACTGCGCTGTGTGCTGTGTTCCTGAATCTGCAGGGGAGAGAGAGACTCATACCTAGTCAGCGGGTGGGAGTCACTCCAGGCCGGAGGGATGACCTGCCCAAAGAGCATCTGTGTCCTGCCCAGGGAGGGGTGCAGAGAGGAGGCTGCAGGGGTGGAAGGGACTGCCCCACCGAGGCCAGGAGGGTGCTTGAGGAACAGCAGGATTGAAGGAGCCTATGTTGTCCAGAGTGAGGCTGAGTGGGCCAGGCCAGTGCTGCTAAGGTCCTGAGGACCCCTAAGGGCAGTGGACATGAGAAGGCATG-------------------------GCTGGGCAGGTTTTCTGAGGATGGTGGAGGTGAGCAGAGTGAGGCCTTGTCTCTTGTGTCAGGCAAGGAGGTACCCCAAGAAGAGGCTGCATg s mm3.chr5 15867898 426 - 149719773 GTCCCCGCAGGTTCAAGGAT---GTAAAGACCAGAAGTCAAGC------TGACTTCTTCC-------CAAAGCCAGC------ATCCTGGGGTGGGAAAGGATGGGAAATTCCAGCCACATCCTCCCTCTAGCATGAGGCTCTGGTTCAGATCCTGC--TATGTATATGTGGTCCTGACCAAGGCAAGAGGTCAGGTGGCCCTGAGAAGCAGTGACCGGATACCTAACATT--------------------------------------------------------------------GCCATTGGGCATCACTCTGGGCTGGAGGAATG------------------------------TGGGCGGGCTGCACAGAGAGAGATTCAATAATAGATGTA-------------------------GCTGGAGCCACAGGAGGCTTGAACGAGCCTCTGCCTT-CATTGGAAGGCTGGGTGGCATCGGTCA-------------------AACC----AGGGCACTAGTGGTAAGGGAGCATA---------------------------CAGGAAAGTCCTGTATGAAAGATG-------GTAGACTG---------TTCTTGTGTTTTG--------------GAGCGGAGGA------ s rn2.chr12 21301855 416 + 46874691 GTCCCAGCAGGTTCAAG--------------------TCAAGC------TGACTTCTTCC-------CAAAGCCAGC------ATCGTGGG-TGGGAAAGGATGGGAAATTCCAGTCACATCCTCCCTCTAGCATGAGGCTCTGGTTCAGATCCTGC--TGTGTACATGTGGTGCCGGCCAAG-----AGGTCGGGTAGCCCCGAGAAGCAATGCTCGGGTACCTAACGTT--------------------------------------------------------------------CCCGTTGGGCACCACTCTGGCCTGCAGGAATG------------------------------TGGGTGGGCTGCGTGGAGAGAGATACA--------------------------------------TGGGAGCCACGGGAAGCT-GAATGAGCCTCTGCCGT-AATTGGGAGGCCGAGTGGCACCAGGCA-------------------AACC----AGGGCACTACTGGAAAGGGAGGACATGAGCGATCGTGGCTGGAGCCAGGATCCAGGGAAGTCCTGTGTGAATGACG-------GTAGACTG---------TTCTTGTGTTTTG--------------AAGGGGAGGA------ a score=78519.000000 s hg15.chr7_random 985668 767 + 1057565 GGCCTCAGTTTCCCCATAGCGAATGGTTCATTGGGGGGTAGGTGGCACTGCCCACCCCAGGACATAGGAGAGAACCCTTAGTTCTGACCGTCTCCCCCT-TCATGCACTTGGTTCTCTGACTGCTGCTCTGAGGACGGAGCTAAGTGAGGGTGCAGGAGGAAGGGGGGGTCTCTTGGC-AGTGGGGC--GCAGCCTTTTGAGGTGCTGCATAGC------------------------------TAGTTTG--ACCTGTGGGACCACTGA----CCATCCCTCCTCTTCCCGGTGCTCCTGGC--CTCCTGTGGCTGGGATGGTGCTGGGGAGGAGGTG---------------GGGGGTGCCAG-------------CTGGA-GGTGGGCGGGGCTCCTGCCTCTCCCCGCCC-CCAGGGCCACCGCCCAATGTGCCGCGCATTGATTGGTCGCGGGCCCATTAG-GCGGGGCGGCGAGTCCGACTCATAAATATTTTAAGGAATGACCCGGCCCTGGGGTGCGGAAATGCT--GCGCGGGCGGGGGCTGAAGACCGGCttttttttttttttttttttttGGTCCTCCAATTGTCAGCGCTATTTTTACCGCCGGAAAGCCG-CCG-CCCCCTCCCCCATGCCGGCTGGACCTGTCTAGCCGGGCTGGTGGCTGGGGTCTCTTGTCTGGGTTGCTGGTCGTGGGGTTAGGAGAGGCCGTGGCCTGGAAAGGCGATGAGCAGGGA---CTCCATTAGACTTCCCCTGCCCTCCTCGCTCCATCCCCCAGCACCAAAAACCACTCTGAAGCCCCCATCCCATCAGAG---ATGGGGAAAAAAAAAACACA s mm3.chr5 15868326 710 - 149719773 GTCATTA--------------AATGGCTTATTAAAG-------GACGCCATCTCACCTAAAAC-----AGATGATCATTCATTCTGACCATTTCTTCCTCTCATGCAGTTAGTGGCC------CTGCAC--------AAACTAA---------------------AGGACATCTTGCCTAATGTTGCCTGCATCCCTCCTAGCTACCGTATCGCACGT-------GGACACCCTTAGTAGCCAGTAGATTGCACCCTGAGGGACCTCAGATTCCCCACCCTTCTTCTCCCGGGAGTATCTGTCTACACCTGAGCCAAGGGGGGTACCAAAAG-AGGCTGCTGTCGCCACAGCAAGGGTTTCCCAGAAACCCGAGCCTCCTGGGCAGGGGGCGGGGCCGCCGCATCTCCCCGCCCACCAAGCGCA----------------GGATCGATTAGTGCTCTGCCCATTAGCGTGGAGCGGCGAGGCGGCCTCATCAATATTTTAAGAAATGACCAGGCCTTGGGGTCCGGAACTGCTCACTGCTGACGGGGGTTGAAGACGGGC-TTTTTCCCTCCCTTT-----------TCCTATTGTCAGCGCTATTTTTACTACCGGAAAGCCGTCCACCCCCCTCTGCTGCCCTGTCTGCAC---------------TGTGACT--------CGGTCTGGGTGTCTGGCCTTGAGGTTAGTCAAGGCAGTGGCTTTTTAAGACCATGAGCAGGGGGATCTTGGTCAAGCTGTCCCTGCCCTGCTCTC----------------GGCGACCCCTCCAAAG-CCCCATCCCACTTAAG---AACAACAAAGCCACAAAACA s rn2.chr12 21302273 716 + 46874691 GTCATTA--------------AATGGCTCATTAAAG-------GACGCTGTCTCACCAAAAAC-----AGATGACCATTCATTCTGGTCATCTCTTCCTCTCATGCTGTTGGTGGTC------CCGCAC--------AAACTAA---------------------GGGCCATCTTGCCTAATGTTGCCTGCATCCCTCCTGGCTACCGTATCGCACATCACACCTGGGCCCCCCTAGTAGCCAGTAGATTGCACCCTGAGGGACCTCAGACTCCTCAGCCTTCCCCTCCCGGGAGTATCTGTCGACTCCTGAGCCAAGAGGG-TACCAGAGGGAGGCTGTTGTCACCACAGCAAGGGTTTCCCAGAAACCCGAGCCTCCTGGGCAGGGGGCGGGGCCGCCGCGTCTCCCCGCCCACCGAGCCCA----------------GGATCGATTAGTGCTCTGCCCATTAGCGCGGAGCGGCAAGGCGGCCTCATCAATATTTTAAGGAATGACCAGGCCTTGGGGTCCGGAACTGCTCACTGCTAGCGGGGGTTGAAGACGGGCTTTTTTCCCTCCCTTT-----------TCCTATTGTCAGCGCTATTTTTACTACCGGAAAGCCGTCCA-CCCCCTCTGCTGCCCTGTCTGCGC---------------AGTGACT--------CTGTCTGAGTGTCTGGCCTTGAGGTTAGTCAAGGCAGTGGCTTTGAAAGACCATGAGCAGGGGGATCTTAGTCAAGCTGTCCCTGCCCTGCTCTC-----------------GCGACCCCTCCAAAG-CCCCATCCCACTTAAGAACAACAACAAAGCCAAAAA--- a score=31917.000000 s hg15.chr7_random 986435 539 + 1057565 TTTTTTCAGGAGGAGAAGGCAGACAGCCCAGCTGAGCCTAGAAAAA-CCGGAGGTGGGGGGGTGTAATGGATGGGGGGAGGGTGGTCTACCCGCCCAGTGCTCCGAGGAGGGCCAGCAC--------------------------CACAGGGGGCCCTGGC----TGGGCTTCCTT--TGTCTCCCACGCCC---GTCCTCAGAGAAGCAGCCTGTGAGGGGGAGAGGCAACCCCCTACCTGTCCCTAGTCCCAATGGAATGACAGCCCAGTCT-------TCAATGTCCAAGGCCATCACTTCTGCATCAAAATCAGGAGCCCCTAGAAGCCACACACAGCTCC------AGCAATcccattttactgatagggaagtggaggcaccaagagacacagggcccggcccaggatAGAGTCCAGATCTCCCAGAGCCCAGTCCAGCACTGCCTGGCACCAACTCAGCTGGTCTGTTTGGACACCTTGGGACCATAGGAGGAGAGCTG-------ACCAC-----CAAGAGAGTTAAAGACCATAGGGTCTTGGAGATCAGAGGGGGAGAGCAGTATAGGGAAGTTTTCCTGGGAGAAGAGA s mm3.chr5 15869262 470 - 149719773 TTTTTTCAGGCTAGGAAGCTAGTTAGGGGCGCTAAGACCAAACAGACCCCATTGTAGTGAAGTGTGGGGGATGCTGG-----------ATCTCTCTAGTA--CCTA-GGGACCTACCAT------------------------CTCTCA----CCCCTGGACTAGTAGGCTTTGTCTTTATCTC---AGCCCAAAGACCTCAGGAT---------------GCAGTTGTCATTCCTTACCTGTCCCAGACCCTAGGAGCGTGGCAG-CTGGTCCTCAGTCGTCAATGTCCAG-----------------------CGTATGTCCTTACATATCTTA---------------AGCCGT-CTGTTATACTGATAGAAAAACCAAGGCTCCAGGGAATA-GGGTATTGGGCCAGGACAGAGCACACTCCTCCCAGGGCTGAGTC------------------ACTAGGCT----TCTTCTAGCACC-TGGGGCTGCAGGAGGAGAGCTGGGATATGACCACAGACACCAGAAGGTCACGGGCCACAAGGACATGTGAATTCCTGT------CTAGTACAGAGAGAAACTTCCAGGAAAAGGCA s rn2.chr12 21303191 491 + 46874691 TCTTTCCAGGCGAGG-AGCCAGTTAGGGGAGCTAAGATCAGACAGA-CCCATTGTAGTGAAGAGTGGCAGACGCTGG-----------ACCTTTCTAGTA--CCTAGGGGACCTACCATGCCCCCACTTCCCACCCTCCCACCCCCCCA----ACCCTGGTCTAGTAGGCTTTGTC--TATCTC---TGCCCAAAGAGCTCAGGAT------------------GTTTTCATTCCTTACCTGTCCCAGGTCCTCGTTGGGTGGCAG-CTGGTCT-------TCAATGTCCAG-----------------------CGAGTGTACTTTCATAGCTCACCCAGCCCCTGCTCCAGCCCT-CTGTTACACTGATAGAGAAACCAAGGCTCCGGGGAATG-GGGTATTGGGCCAGGATGGAGCACACTCCTCCCCGGGCTGAGTC------------------ACTAGGCT----TCTTCTAGCACC-AGGTGCTGCAGGAGGAGCGTTGGGATATAACCACAGACACCAG-AGGTCACAGGCCACAAGGACATGTGAATTCCTGT------CTAGTAC----AGAAACTTCCAGGAAAAGGCA a score=62023.000000 s hg15.chr7_random 987778 1431 + 1057565 CTCAACCTGCTTCCTCTGCATCCGGGGCTGGACCTACTGAGGG----CTTCTGTGCCAGGCATCAGGCCCACAGGCTCCTGGGTGGCCTGCAGGGTTAGGTAGGAGAGGTCAGGGCAGTCCCAACCTCCCAGTGCCTCCCAGGCCAGTC-CCTGCCTAGGACCTGGCCACACCTGCCATGCCCTTGGAAGATTCCTCTCTAAGTTCCACTCCCACTCCAGTGAGGGCCACCTGAGACCCACCTGCGAGAGCCTCCCCCAGGGCCCTGTCCCCCAT--CTCTGTGCCTTCTCCCTACCAAGGGTTC------CTCCAGCCAGGAAGAAGAG----------CTGGGGGCGACAGGGATTGATGTCTAGGACTCGGCACTGGGGCTGACTTCCTGCCTGCCGCTGCCTGCCCCATGTGGGGGCATAATCATCTCACTCAGGGACCCCACACCTACCCTTCCCAGGCTGCCAAGTCACTGGCTCTGAGCCCCCTGGGGGTCCTAATGGTATAGAGAGAGAGGTGGCCACCGTCAGGAGCACTAGCCTACTGGATAAATGGATGGGCTTGGAGCTCAGGGACAGGGTTTCATGGGTTCAGCTGTGGCCCCACCCCCACCCCACGAAATACCACCCCTGCAGGCCATGGCCTGGGCCTGGGCTCGTGACCTTCCCTGGAGGCCAtggtggtggtggtggtggtggCAGGTGTGTTCCC---------ATCTCCACCCCTCAGG-GAAGAACAAGTTCCAGGAGCCTG------------GACTTTtgccctgcgcactct-----------------ctgtg------------tcagatggggagacagccatgaggacagacacttgaagtaccctataactggcaccatgcaagagagacaggcaggagga-------------------------gactgtggga----------------------------------gctcaga-----------------------ggagacacttgtgctggcctggatcagggagaaaggaggggtgtcgggaggcttcctggaagaagtggcttctggattaattattgaagtgtgagtaggagttagggaagaaaggaggaagcacggggcagggaaaaggtcaggcatgagcaaagCTCGTGGGTTCCTCAGTCCCCATCCTCCCCCCACCTTCGTGAACTCTAACCACCACCACCACTACCCAACTGCCAAT-GTCCTGATAAGTCCTGCCCCCAACTCATTGTTCAGGCCCCCAG-----CACCCTCTTTATTTTCTTTGCACTCATGAAGCCCAACGCAATAACCACCTCTTGAAGGAAACCTTCCAAACTCCCGACTCCCCTCCCCCAGTACCAAGGCAGGAGTCTCCTAGGAGACCGCTGGTTTGGAAACCTGTCCTTGAAGCTAAGCAGGCTCAGCCGGGAGCCCTGTTCTGTCCCTGGGGCTGTCCCTTGGTT-ATTGACTGCAGATTGATGGCGAGGTTGCCCCAAGGAGAGAGGGAATTCCCACGGTGCCCTATGGCCCAGAGGCCTCGCAGATGATCTCACAGAAATGGGGCAGCTA s mm3.chr5 15871067 1024 - 149719773 cTTTCCCTG--TTCTGTGTAGCCTGTG--------ACACAAGA----TAGCTATAAT-GACACCCCGGCCATAAGCTGCTGGCCTGCCAGTGGGGTTGG-GAAGAGAGGGCAGGAAAGACCTA-------------------GTCAGTTTCCTGATTAGGACACAA-TATACCTGTCAGAATCTTGGCAGAGTCC-----AATTTCCGT-CTGGTGTAAGTGGGG------TGA-----------------CCCTACATAGGTCCTGTCCCCTGTGACTCTGTCCCTTCT-------AAGGCTTT-----------------------------------CC-----------------------------CAGTGCT-GGGCTGA---CCTGTCAAC---------CTCCACACAGGTCCATAACTGGTCTTCCAA------CTATGCTCACCCATTCCA----------TCAC-----------------------------GTACGGAGCAGGAGATG-------------------CTCTGCTGCGTAAGTCCATGGACTTACGG------------------TGGGTTTAGCAGTG------CTTCCAGCTT--------------------------------------GCTTGGGGACTgtggtggtggcggtggtggtggtggtggtggtggtggcggcggCCCTG--------GCCTCTACTTCCAGGG-AAAGAGTGAGTGTCAGGAACCTGAGATATGATCCAGGTCTTCCTTCTGCACCCACACAGCAGCGCATGACTGCCTGTAACTCCAGGAAATCCAGCTGGAGAAAGAGACTTAAAAGCATGCAC--AGAACACAGTGCAATTGGTAGCTTGCTAGTGGGACACTCATGAGGg-------------------------gaccatgggc----------------------------------acttaga-----------------------agagacacttgtgctagcttgggc---------agacgaagtcaaggaaggcttcctagaggaagatgtttc-------atcatggaagggtgaataggagtt---------------------------------gggtcaggCCTGTGAAATGCTTATGAGGGCT-CAGTGCCCA-TCTCTCTCCACCTTCATGGGCTTCACACACCACC------CTCTGATTTCCAAAAGTCCTGATTAGTCCCACTGC--AGTCAATGCTCC-TTCCGTGGCGTGACGCCATCTTTGTCCTATCTATAGGTGAGAAGCCCGGC----------------------------------------------------------------------------------------------ACCTGTCT-----------CGAGCAC--------------TTCTG-TTCTGGGTGGATCCTGTACTT-AATGGCTGTTGCC-----------TTGGCCTAGGGAGGGAGGGGATTCCC-TTGTGCCCTCTGGCCCCGAGGCTCCAAGGATACT---------GTCGAACAGCTA s rn2.chr12 21304997 1154 + 46874691 CTTCCCCTG--TTCTCTGTAGCCTGGG--------ACACAAGACAGCTAGCTATACT-GGC-------CCATAAGCTCCTGGCCTGCCGGTGGGGTTGGAGAAGAGAGGGCAGGAAAGATCCA-------------------GCCACTCTCCTGCTTAGGACACAA-TGCACCTCTCAGAATCTTGGCGGAGTCT-----AATTTCCAC-CTGGCTTGGGTGGGG--------------------------CCCTACATAGGCCCTGTCCTCCGTGATTCTGTTCCTTCTCCATTCAAAGGCTTTCACAGCCATCAGAAGGGACAAAGGGAAGCCTAAAACC-----------------------------CAGTGCCAGGGCTGACCTCCTAGCAGC---------CTCCACACAGGCCCATAATTAGCCTTCCGA------CCATGCTCACCCATGCCA----------TCAC-------------------------------ACAGAGTAGGAGATG-------------------CCCTGCTGGGTAAGTGCATGGACTTGGGG--------CAGGCCCTCCTGGGTTTAGCAGTGAGTC--CTTCCATCCT--------------------------------------TCTTGGAG---GTCAtggtggtggtggtggtggtggtggtggtgacggcagtggCCTAGCAGGTACAGTCCCTACTTCCAGGGAAAAGAGTGAGTGACAGGAATCTGAGATATGACTCAGGCCTTCCTTC--CGCCCACA---------AGGACAACCCGTG------------CCAGCCGGAGAGATAGACTTAAAAGCAGGCAC--AGAGCACAGCACAAGTGGTAGCTTGCTAGAGGGACACTCATGGAagcttagaagagacacttgtcgcgcaaggccctgggttcagtccccagctccgaaaaaaagaaaaaagaagacgaagaaagaaaaaaaaaaaaaaaGagagagagacacttgtgccagcctggac---------agaggaagtcaaggaaggcttcctagaggaagaagtttc-------attatggaaggatgactaggagttgagaa--------------acagggtagagtaagggTCAGGCATCCGTGACGCTCATGAGGACC-CAGCGCCCA-CCTCTCTCCA-CTTCACGGACTTCGCACACTGCC------CTCTGATTTCCAAA----------AGTCTCACCGC--AGTCATTGCTCC-TTCCGTGG-----CGCCACCTTTGTCCTATCTATAGGTGAGAAACCGGTC----------------------------------------------------------------------------------------------ATTTTTCT-----------CAGGCAC--------------TTCTG-CCCTGGTTGGATCCTGTACTTAAAGGGCGGTTGCT-----------GTGGCCTAGGGAGGGAGGGGATTCCC-TTGTGCCCTCTGGCCCTGAGGCTCCACTGATGTTGTCA-AGAAGTCGAACAGCTA a score=29716.000000 s hg15.chr7_random 989209 258 + 1057565 TTTTTACCTGGCATTTAATTACATGGTTTGGATCCCAGAGGAGAGATGAGATGGTGATCCCAGGAGCTGCGAGGGAGGGGCATTCCGGAAACTGTGGGGACCCTGGGAGGACAGGCGAGGGCATGATCCTCTAACTCATTTCCTTGGAAGGATGGTCGCTTGTCCCCCAACACT-------AAGCCGGCTCCTTAGACAGGGACTCCCC---AGGCACTACATCACCGCACTTTATCA------CTATTGATAATTTTCCCCCTGGCT-------------------------TGGATG s mm3.chr5 15872091 281 - 149719773 TTTTTACCTAGAGTTTAATTATAGGACTTAAATATCAGGGGAGATCTGAGGTAGGGTCCCCAAGGGCTGTGGGGCAGGGGTAG-CCTAGAGCCCTGGAGATCCTGTGAAGACAGGTGAGAGCCTGAGTCTCTA--------CAGCAGAGGGATAGGTGC-TGCCCCTCAACATGCCACAGGAAACTGGCCTCTGCGGCAGGGGGTCACCGG-GGGGCCTGTATCTCCCTACTTAACTT-------CCTTAGTTTTTTCTTCACTTACTTAAGGTCAAAGTTACCAAAGGAAACTGGATG s rn2.chr12 21306277 285 + 46874691 TTTTTACCTAGAGTTTAATTATAGGGCTTGAATGCCAGGGGAAATCTCAGGTGGGGTTCCCAAGGGCTGTGGAGCAGAGGTAGTCCCAAAGCCAAAGAGATCCTGTGAGGACAGGTGAGAGCCTAAGTCTCTA-----------CAGAGGGACAGGTGC-TGCCCCTCAACACTCCACAGGAAACTGGCCTCT-CAGC-GGGGGTCACCAGCAGGGCCTGCACCTCCCTACTTAGTTTAGTTTCCTTTTTTTTTTTTCTTCACTAACTTAAGGTCAAAGTTACCAAAGGAAAATGGATG a score=26309.000000 s hg15.chr7_random 989467 302 + 1057565 GGG-----------------GCTGT----AAGCACACAGCAGGTTGGACC--------------------------------------------------TGTGTCCCCAGAGGCAATGGC--------------------AAGGCCCCCAGGTGATGGGCTGGGCCCAAGCCATGCAGTTTAGCCATCCAGAGCTGTGAAG-GATGGAGGGGCCTGGGAAT-AAGAGGATGAAGCTGGGGTGAGGAGACAGCTGGGATTCCTGGATTGGGGATTCAAAATCGGATTTGAATGGGAATTCTGGGGGAAGCCAGATTCCAGAACGTGGGAATGTAAGTAGAAGCGTGCAGGCCATTGTGATGGAAAGAAGCAAGGTCTTCAATGTCCGTACAAAAA s mm3.chr5 15872549 336 - 149719773 gAGTTCAGAAGTCAAGCTAAGCTGTTGGCTAACATACAGAAAGGAGGCCCTAGATACAATGTAAGAAAGAAAAGGAATGAGGGGGGCAGAACTGGCTGGCTGTGTTCCCAGGGATGTTGGCCACAACAGGGGACAGGAAACAAGTCCCCCAGATGACTACCT-GACATGCACTCTGCAGTTTAGCCATTCTAAGTGATAAAA-GATGGAGTTGCCTAGCAACAAAGTGGAAGAAGCTGGAATGAAGAGACAGCTGGGATTTCTAGATTGG----------TCCAGTGGGGATGGGAGTTCTGGAAGGAAC------------------------------AACATCCAGGCTACCATGAAAGATAGAAAT-----------------TAAAAAAA s rn2.chr12 21307306 312 + 46874691 gtg------------gtagagccattgagtaatatgcagcaaggaggaactgggTACAACGGAAGAAAGGAAACAAATGAGGGGG-CAGAAGTGGCAGGTTGTGTTCCCAGGGATGTTGACCACAACAGGGGACAGGAAATAAGTCCCCCAGATGACTACCT-GACACGCACTCTGCAGTTTACCCATTCTAAGTGGTAAAAAGATGGGGTTGCCTAGCAACAAAGTGGAAGAAGCTGGAATGAAGAGACAGCTGGGATTTCTAGATTGG----------TCCAGTGGGGATGGGAGTTCTGGAAGGAAC------------------------------AACAGGCAAGCTACCATGA-----------------------------AAAGGGG a score=9483.000000 s hg15.chr7_random 990464 72 + 1057565 CATATTTGATCCACACTAGGAGGAGACCCCTcaagtcctggagtcactgcagacctgggcgagaaccctgga s mm3.chr5 15872936 71 - 149719773 CATCTTTGAGTCATATGGGAAGATGACCCCCAAAATCCCAGGATCA-GGAAGAGCTGAGGTAAAACCCTTGA s rn2.chr12 21307669 71 + 46874691 CATCTTGGAGTCATATGGGAAGATGACCCCCGAGGTCCCAGGGTCA-GGAAGAGCTGAGGTAAAGCCCCTAG a score=13361.000000 s hg15.chr7_random 992688 124 + 1057565 CCGGGCTTTGGGGAACATCAGAAGAGGTCACTGAGGAA-GTGAGGTCACCAGAGGCTCATGGGGACCCCACTTGAAAGCATCCATCATCCCAGCCTCTTCTGCCAGCCCCAGGAATGACCCTGAG s mm3.chr5 15873356 119 - 149719773 CCAGGGCTTGGGGACCTT--GGTGAGGTTACTAAAGAGTATGAGGTCACCCAAAACTCATGGGC-CACCATTTGAAGGTGTCTGTCCCCTCAGCCTCCTTGACCAG---AATGAGTGACCCTGGG s rn2.chr12 21308088 101 + 46874691 CCAGGGCTTGGGGACCTT--GGAGGGGTT------------------ACCCAAAACTCATGAGG-CACCATTTGAAGATGTCTGTCCCCTCAGCCTCCTTGACCAA---AATGAATGACCTGGGG a score=7620.000000 s hg15.chr7_random 993298 81 + 1057565 CCAGTTGTCTTTCTCTTTACACACATCCATGCTGCTTGGAATGGCTGCCTG---CTGTAGTCCCACAACA----CACACGTGTGCATG s mm3.chr5 15873708 83 - 149719773 ---CCTACCTCCCCGTCTAT-CACGTGCACACTGGTTGG-ATGGCAGCCTGCACCTCCAGCCTCACCAAGTTGCCTCATGTGCGCATG s rn2.chr12 21308283 82 + 46874691 ---GCTACCTCTGCATCTAT-CACGTGCACGCTAGTTGG--TGGCAGCCTGCACCTCCAGCCTCAGCAGGTTGGCACATGTGTGTATA a score=160318.000000 s hg15.chr7_random 993499 927 + 1057565 GCTGCGATGGGACGGAAGCCATGAATGGTGccggccctggccccgccgcagccgccccggtcccagtcccggtcccggtcccggACTGGCGGCAGTTTTGCGAGCTGCATGCGCAGGCGGCCGCCGTGGACTTTGCGCACAAGTTCTGCCGTTTCCTGCGGGACAACCCAGCTTACGACACGCCCGACGCCGGCGCCTCCTTCTCCCGCCACTTCGCCGCCAACTTCCTGGACGTCTTCGGCGAGGAGGTGCGCCGCGTGCTGGTGGCTG-GGCCGACGACTCGGGGCGCGGCCGTGAGCGCAGAGGCCATGGAGCCGGAGCTCGCGGACACC---------TCTGCACTCAAGGCGGC-GCCTACGGCCACTCGCGGAGCTCGGAGGACGTGTCCACGCACGCGGCCACCAAGGCCCGCGTTCGCAAGGGCTTCTCGCTGCGCAACATGAGCCTGTGCGTGGTGGACGGCGTGCGCGACATGTGGCACCGGCGCGCCTCGCCCGAGCCCGACGCGGCAGCTGCCCCGCGCACCGCC------------GAGCCCCGCGACAAGTGGACGCGGCGCCTGAGGCTGTCGCGGACGCTGGCTGCCAAGGTGGAGCTGGTGGACATTCAACGCGAGGGGGCGCTGCGCTTCATGGTGGCCGACGACGCGGCCGCGGGCTCCGGGGGCTCGGCTCAGTGGCAGAAGTGCCGCCTGCTCCTGCGCAGGGCTGTGGCCGAGGAACGCTTCCGCCTGGAGTTCTTCGTGCCGCCCAAAGTGA--------------GTTACC--CCATAATCCCACCTAGCCTGGGGG------GACCAG---------AGGAGGCACCTGGGCAG---CAGCTGAGGGTGCCAGGGACTGCCTTTGGGGACCGCGTGGTCTAATCTGGTTGACAGGGTGAAGT-ATTTGGTGCCAGGACCCTGGGAGGTGGGCCTGTCATGC--CTCTTGAACAAGTCACCCC s mm3.chr5 15873958 930 - 149719773 GCTGCCATGGGACCAAAGCCATGAATGGTGCCACCCCCAGCTCGGCCGCCGC---------------CCCCGCCCCAGTCCCCGACTGGCGGCAATTCTGCGAGCTGCACGCGCAGGTGGCTGCTGTGGACTTCGCACACAAGTTCTGCCGCTTCCTTCGGGACAACCCGACCTACGACACGCCTGACGCTGGGACCTCATTCTCCCGCCACTTTGCAGCCAACTTCTTGGCTGTCTTCAGTGAGGAGGTGCGCCGCGTGCTGGGGTCAGCAGCCGAC----------------------------ACTATGGAACCCGAGCCTGCGGTGACCTCGGTGACATCTGCGCTCAAGACTGCAACCTATGGCCACTCCCGCAGCTCCGAGGATGTGTCTGCCCACGCGGCTACCAAGGCGCGTGTCCGAAAGGGATTCTCGCTGCGTAACATGAGCCTGTGTGTGGTGGATGGAGTGCGCGACCTGTGGCACCGGCGCTCGTCCCCAGAGCCCGATGGTGGGGCCACCCCCAAGGCCGCCGAGCCTGCGTCGGAGCCTCGTGACAAATGGACGCGACGCCTGCGGCTAGCACGAACCCTGGCAGCCAAAGTGGAGTTAGTGGACATCCAGCGTGAGGGCGCCCTGCGCTTCATGGTGGCAGACGACGCGGCCTCAGGGCCTGGAGGCACTGCGCAGTGGCAGAAGTGTCGCCTGCTCCTGCGGAGGGCTGTGGCTGGGGAACGTTTCCGCCTGGAGTTCTTCGTGCCACCCAAGGTGCGTATCTGGATGTATGTCACCAACAATCTTCCCATCCCTCACGGGGACCCATTTACCTGCACAGTCTATGGGAGCTGCAGGCCAGTGACAG--GTAGGTCCCTAGGGA-TGGTTTGGAGATTGTGTGGCTTGATCTAATTGACAGGGTGTTGTAATGTAGCATCTGAAATCAGGGAG-------TGGCACGG--CTTTCAGACA--TCACCCC s rn2.chr12 21308777 920 + 46874691 GCTGCCATGGGACCAAAGCCATGAATGGTGCCACCCCCGGCTCGGCAGCCGC---------------CCCCGCCCCAGTCCCCGACTGGAGGCAATTCTGCGAGCTGCACGCTCAGGTAGCTGCTGTGGACTTCGCTCACAAGTTCTGCCGCTTCCTTCGGGACAACCCGACCTACGACACGCCTGACGCTGGGACCTCGTTCTCCCGCCACTTTGCAGCCAACTTCTTGGCAGTCTTCAGCGAGGAAGTGCGCCGCGTGCTGGGGACAGCAGCTGAC----------------------------ACCATGGAACCCGAGCCTGCGGTGACCTCCGTGACCTCGGCGCTCAAGACTGCAACCTATGGCCACTCTCGCAGCTCCGAAGATGTGTCTGCTCACGTGGCTACCAAGGCCCGTGTCCGCAAAGGCTTCTCACTGCGTAACATGAGCCTGTGTGTAGTGGACGGAGTGCGCGACCTATGGCACCGGCGCGCATCCCCAGAGCCCGAGGGTGGGGCCACCCCGAAAACCACCGAGCCTGTGTCCGAGCCTCGTGACAAATGGACGCGACGTCTGCGGCTGGCACGAACCCTGGCAGCCAAAGTGGAGTTAGTGGACATCCAGCGCGAGGGCGCACTGCGCTTCATGGTGGCAGATGATGCAGCCTCCGGCCCTGGGGGCACGGCACAGTGGCAGAAATGTCGCCTGCTCCTCCGAAGGGCTGTGGCCGGAGAGCGCTTCCGCCTGGAGTTCTTCGTGCCACCCAAGGTGTGTATCTTGGTGCATGTTGCCAACAGTCTTCCCATCCCTCTTGGGGGCCCGTTGACCTG--CAGTCTATGGGAGCCT-----------CAG--GTGGGTCCCTAGGACTTGGTTTGGGGATTGTGTGGCTCGATCTGATTGACAGGTTTTTGTAATGTAGCATCTGAAGTCAGGGAG-------TAACAAGGTACTATCAGACA--TGTCCCC a score=5647.000000 s hg15.chr7_random 995677 46 + 1057565 agg-----------gaagtgtggcctgcccaacgtcacccagctggcgggtgccaga s mm3.chr5 15875320 53 - 149719773 aGC--AGAGTCTATGCAGAGGAGCCTGCCTGAAGTCACACTG--AGTGGGTGACAGA s rn2.chr12 21310142 57 + 46874691 aGCCAACAGTCTATGCAGAGGAGCCTGCCTGAAGTCACACTGACAGTGGGTGGCAGA a score=54730.000000 s hg15.chr7_random 996198 746 + 1057565 TCCGATCTAATGATACCT-GCCACCCTGGTGGTCCCAAGAACGAAAGGAACATGGAAGTGGAGGTCCTTGGGCACTGAGAGGTTTAGGCAGGGGGAGGTTTTGCTGGTGCAGCAGCCGACAGCACCCCCAGGGACCACCGGGGACCCCACACCCACCTCCCGCATCAGGGCCCACTCTGTCCCTGGGTGCTCTCTGAGTCACCCGCCGCTTCTTGGCTCTCTCTCCATCTCTCAGTCTGCTGGGGTGCAGGGGTGTGGGCTCCCCAAGGCTCATCGCCCATGAGCCACATGGGCCCTGGAAAAGTGACTTCCCAGGGACACAGCTACTCTCTGAAGAGCTT------------TTTCCCCAGGTCCCAGCACCCCTACACTTCCCTAGGGCTTTTT---TCCTGCCCAGGCCCCTGCCTTTAATTCCctgggagaaatcctagacccctaagcccgactccactccttgtcagaaagggaaaccgaggcccagtgacgggtggggtggggcttacccggggtcacccagagggcagggacagaagcccagggctccAGTGCCTTGGGC-CTGAGTGACAGTCACAGCTGCCCTTCTGTAAATAGCAGTGTCTGCTGCCCTCGGAGAAGGGGAAG----GAGCAGCTGGTGCCCGCCCCCGCCCCACTCCACCGCTTAGTCCCAGCAGAGCCCACTAATTTTGCTGCTGGCAGAGGGCAGCGTTCCTGCAGGGTCACTGGGCCCTTCCCCTCCTTTGTGTCATGCAAA s mm3.chr5 15875378 585 - 149719773 -----ACTAATTATATGTCACCACTCAGACGGTCACCAGAATGAAA----------GGTAGAGTCCCT-----------------------------------------TGGCAGCTGGTAACACCC-------------AAGACCTGA----------CCTCTCCAGGGTTCAGTCT---CCTCGGGGCCCTCCTAGACACTC---------TGAGT--------------CAGTGTACTGGAGGCTTGCCCTCTGGGCTTCCC----CTCAAGGTGCAGGACTGAGAGCCGCCCACAGGCAGAGGCT-----GGG-----GCCACTCCCAGAACACACT-----------------CCAAGTCCCAATACCCCCAGCTTTTCCAAGGGGTTTTTAACCCATACCCAA--------CTTTATGCCCCTGAGAAAAATGCCA----CTAAACCAAGGCTACAA----------------AGACCAAAGCCTGGTGAGTGGT-------GGCTTGCCTAGGGTCACCCAAAGGGCAGAGGCAGAGGCCCATGGTTCCCCTGTCTCTGGCTTTGAGTGGCAGCCCCAGCTGCTGCTCTCTAAATAGCTGTGCTTGTTGCCCTGGGGGAGAGGAAAGGACTCGGCAGCTGGTACCCTCTCC-------ATCTTCCCATTGATCCCTGCAGAGTCCTCCAGCTTCACTGCTGGCAGA----AGAGTTCCTGGGGCATTATTGAGCTCTTCCTTTGTCATCTGTGAGACAAA s rn2.chr12 21310204 606 + 46874691 -----GCTAATTATACATCACCGCATAGCCGGTCGCCAGAATGAAAAGCGACC---GGTAGAGTCCCTTGAAAA-----------------------------CTAGCATGGCAGCCGGTAACACCC-------------AAGACCTGA----------CCACGCCAGGGATCAGTCT---CCCCAGCGACCTCCTAGACACCT---------TGAGT----------------GTTTATTGGGAGCTTGACCTCTGGGCTTCCC----CTCAAGGTGCAGGAGTGAGAGCTGCCCAAAGGGAAAAGCC----AGGG-----GCCACTCCCAGAGCACGCTAATGAAGAGATCTCATCCCAAGTCCCAATACCCCCAGATTTCCCATAGGACTTTTAACCCATACCCAA-----------------CCTGAG-AAAATGCCA----CTAAAGCAAGGCTACAAACAT------------AGACCAAAGCCTGGTGAGGAAT-------GGCTGGCCTAGGGTCACCCAAAGGGCAGGGGCAGAGGCCCAAGGTTTCCCCGTCTCTGGCTTTGAGTGGCAGCTCCAGCTGCTGCCCTCTAAATAGCTGTGCTTGTGACCCTGGGGGAGAGGA-------CAGCAGCTGGTACCCTCTCC-------ATCTTTCCATTGATCCCCACAGAGTCC-CCGGCTTCACTGTGGGCAGA----AGAGTCCCGGAGGGATCACTGAGCTCTTCCTTTCTCAACTTTAAGACTAA a score=18838.000000 s hg15.chr7_random 997112 216 + 1057565 CACCCACGG-----TCCAGATCTC-TTGCCTCCAAGAGGCCTAGATGCACCCTTGGAGCAGTCAGGAGCTCGGGGCCTGCAGGCTCAAAAACCATTGCCTGGCACCTTAGATTTCCCTCTCACACAGCCTTTGAGGTGCCAGCCCTGGTGAGTCAGGTCTCTGGCTTCCTGCCTCCTCACCCCTGCAG----GAAGAGCCTCCTGAACCCCAGGTCCCCTCATTGC s mm3.chr5 15877773 208 - 149719773 CACCCACAGAGCAATCCAGATCTCACCTGGTCCCTGGGAGCTG---GAGCT---GGAAGCTTTGGGAGCTT-GGACCTGCAGGTTCAGGG---TGTTCCTGAGGCCTTCATGTTTCTTT---CATATCTCTTGATTTCTCTGCCC----AAGTCAGGTCTCTAGCTTCCTTTAACCTCACCTATGCCA-TACTGGTAGCATACTGAACCCCAAGTCCTCTTACAGC s rn2.chr12 21312350 207 + 46874691 TACCCACATACCAATCCAGATCTC-TCTGGTCCATTAGAGCTGCCTGTACC---TGAGGCTTTGGGAGCTT-CAGTCTGCAGGTTCAGGG---TGTACCTGAGGCCTTCACGTTTCTTC---CCTATCTCTTGATGTCTCTGCCC----AACTCAGATCTCCAGCTTCCTGTAACCTCACCTATGCCAGTATCAGTG----ACTGAACCCCAAGTCCTCTTACAGC a score=7077.000000 s hg15.chr7_random 997609 330 + 1057565 AGCTGGACCAGGACTGACGGACCTCAGATTCCAAACTGGG----GAACCACAGCATCTCTGGCCAGCAGGATACCTGCTGAAGCTTCCAGTCCAGGCCTCCACTGCAGGCCTCTGTCTGCTCTGTCCCCAGCCCCGCTGGCCGGCACGATGGCCACACAC-----------CGGGGTTAGCCAGGCCCC---GTTCATGCTTCAAGCCTAGCCCTGCACGCGCTGGACAGGGGCCAGTTCTTCCTGGAATTCCCATCTGCCTGCCCATCAAATGTGTGGCCTTTCCATTTCCTCCTAAGAAAGTTCCTGTCCTGGAGAC--AGCGCTGCTGGGAATCTCA--CTCAGGCCAG s mm3.chr5 15878123 324 - 149719773 AACTATGTCAGGACAAATG-ATCTCAGACATTAGCCTGAGATAAGGAACACAGTATCTCCAGCTAGTAGGAGCCCAGGTGAAGGTGCCATTGTAAACCT--------GACCACTCTCC---CTGTCCCAAGA-----TGGCCAACCCCA--GCCACAGGTAAGTGTGAAGATGAGATCAGCTGTGCCCATCAGTCTCTACTATAAGCCCAGCCCGGGTCG-GCTGGACAGCATCCAGGGTGGCCAAGAATTCCCA--------ATCACCAGATAGGAGGCCCTTCCCTTTCCTCTTCAGAAAGTCCCTGTCCCAGAGCCCAAGCCCTGCCGGGAATGTCAGCCTCAGCCCAG a score=44007.000000 s hg15.chr7_random 999629 378 + 1057565 GGAAAGGGTGTCGGGAAATGCTGGGG--------------------------CCACTCACTATCCT-TCTTCTGGCC-CCCAGGCCTCCAGGCCCAAGGTCAGCATCCCACTGTCAGCCATCATTGAGGTCCGCACCACCATGCCCCTGGAAATGCCAGAGAAGGATAACACATTCGTCCTCAAGGTGAGGTCTCACCCCTAACCTCAGAGATCCTCCAGCTGCCCCAGGCCACCTTCCCTTTAGGTGCTACAGCTCCCTAGGGGAGCGAGGGGAAGGAGCCTAAGGCAGGACAGTAGTGGGAGGGAGCCCTGGTGTGGGGGGTTCCCA------GACCCTATGACAGATGCCTAGCACATAGCTAAGACTTGA------GTCT-------GGGCTCCACAGC------------CA-------------GGTGCCTCGGGCGTCGCCCA s mm3.chr5 15878788 394 - 149719773 GGGAAGTGGGACGGGAAATGCAGAGAGGGTCTTCTAAGGCCTCCGAGGTATGACTCTCACTGTCCCATCCTCTGGCCTCCCAGGCTTCCAGACCCAAGGTCAGCATCCCCCTGTCGGCCATCATTGAGGTCCGAACCACTATGCCCCTGGAAATGCCTGAAAAGGACAACACATTTGTGCTCAAGGTGAG-----------------------TCTGTAGCTGACTTGGACCACAGCCCTACTGGGTTCCCCAGCTT-------GAGGTCATTCCAGGGGTGCAAGTCAGACCGTCAAAGGGGGAATAC------AGAGGACATTCCCATGATAGGACCCCACGACAGGT------CACTGGAGTAGGGCATGAATCTGGGTCT-------GAGTTCTAGAGCTATCCACCCCAACATGGTTG-------GCTACCTGGGTCTCCTTCCA s rn2.chr12 21314325 412 + 46874691 GGGAAGTGGGGCGGGAAATGCAGACA---TCTTCTAAGGCCTCCAAAGTGTTCCTCTCACTGTCCTGTCCTCTGGCCTCCCAGGCTTCCAGACCCAAGGTCAGCATCCCCCTGTCGGCCATCATCGAGGTCCGAACCACCATGCCCCTGGAAATGCCTGAGAAGGACAACACATTTGTGCTCAAGGTGAGACCATG-CTGTAGTCTCAAGG--TCTGTAGTTGACTTGGACCACAGCCCTAC--------CCAGCTT-------GAGCTCATTCCAGGGGTGCAAGCCAGACCATCAAAGGGGGAATAA------GGAAGGAGTTCCCATGATACGATCCCAGGACAGGTGTCCATCGCTGGGGTAGGGCTTGA-CCTGGGTCTCAGTTCTGAGTTCTAGAGC----------AACATGGTTGATGGTTGGCCACCTGGGTCTCTTTCCA a score=51394.000000 s hg15.chr7_random 1000014 410 + 1057565 GGCCCCTTGCTCCCATTTACCCCTGGGCCTGGGCGAAGCTCATCAGTTTCACTTCCTGCCCTCCCTTCCCCCACTGGAGCTAGCACACACCCACCT--CGCTGGTGGCCAGCCGGCAGCAGTTATGCAAATGTTCCTG-TCCCAGGGCACTGGAGTGTGGGAACTGGGCAGTCTCCCACAGAGGGCACAAAGGCATCAAGGGGGGGCGGGGAGGCACCCCTGTGGGTCTAGGGGCAGCCCAGCCTTTCCCAGGCCCCACACCGCTGCCAGGGTGGCCTGCAGGGGTTTCTGAGGACACGGCTCCAGGCTGCCAGAGCTGTGGTCCCTGGGCATCCGCAAAGGATCAGAGGGTGTTGGTGAAGCAATGTCCCCG--GGGAGGCCTGGTCCCACCCACTC-ATCC-TGCATGAAGCCCC s mm3.chr5 15879614 394 - 149719773 AGCCCTGTAC-CCTATTTCTTCTTGGGTCTGAATAAAGGTCATTAGA---GCTGCCTTCCCTTCCTTTCCCT-CTGGAGCCAG-ACACTCCTACCTCACACTGGTGGCCAGCTTGTGGAAGTTATGCAAATGTCTGTAGGCACAGGCAAATGGAGTGTGGGAACAGCCCTGGACCCTACAGAGGGCACAAAGACACAGAATGGT---TGAGAGGCGCCCCAGTGGGTCAGGGAGCCTCCTGGCCTTTCTCCAAGCCCGTAGCACTT---GGGTGGCCTGTGGGGGCTGCTAAGGACGTGGGTCTAGGCTGCTAAGGTTGTGGTCA--GGACTTCCTGAAGGAACAAGA------CTATGAAGCTGAGTTCCCTCCAGGAGGCC-ATTTCCTCCCACTT-AAGC-GGTCAGAGCCCCC s rn2.chr12 21315139 379 + 46874691 AGCTCTGTTC-TCTATTTCTTCTTGGGTCTGAGTAAAGGTCATTAGG---GCCGCCTTCCCCTCCTTTCCCT-CTGGAGCCAG-ACACTCCCACCTTACACTGGTGGCCAGCTTGTTGAAGTTATGCAAATGTCTGTA----CAGGCAAGTGGAGTGTGGGAATGGCCCTGGTCCCTACAGAGGGTACAGAGACACAAAATGGG---TGAGAGGCACCCCAGTGGGTCTGGGAGCCTTCTGTCCTTTCTCCAGGCCCATAGCACTG---GGGTGGCCTGTGGGGGCTGCTGAGGACATGGGTCCAAGCTGCTAGGGTTGTGGTCA--GGACTTCCTG-------------------ATGGATCCAAGTCCCCTCCAGGAGGCC-AGCTCCTCCCACTTGAAGCTGGTCAGAGCCCCC a score=70893.000000 s hg15.chr7_random 1001102 827 + 1057565 cctgggttcaggccctggccctgccactggctgctgtgtgacttt-gaccaagttccttggcctccctgaaccttggtcttctcatctataaaatgggggaaatggctcctctccctcacagggccgttgggaggagttgagcagaatgcagggttatgctctgggcctggccccagcaggGATGTCTCCTGCCCTCTTCCCCTTCAGAGGCTTCGTATCTCAAGCGCATGGCCATGCCGGTAGAACTCCAGGCACTAAGACATGCAAGCCCCCCTACTCAGTGTGCTTGGCCAGCCTGTCTCTCCACTCAACTTGAACCCCACCCCTGGGGTGCCAGGGCATGGGTTGGGGATGCTGGGCCACCCATCCCTCCCCCTGCCAGCATGGCCTCCTCAGAGGCTGCGTCTCTAAGGCAGAGGAGCTGAGATCAGTGGGGTGGGACATATCCCCAGTGGGGAGGCCCAGAAGGGAGGGAATACAGAGTGTGAGCTGGGTCCCTGGCCTGAGTTCCAGGTGGTGCCCGATGGTGACCCCACTTTCTTTCCTGCTGCTCATGCCCTTGAGCCCTGCTGTGGGAGAGGGGGATCAGCCATTTGAGCCACTCTGACCCTATGTCCTGTGGTCTGGAGCCCAT--------CTGCTGACCGTGTTCTGCACTCCCGGCCACCTTCCTCCCCAGGTAGAGAATGGAGCCGAATACATCTTGGAGACCATCGACTCTCTGCAGAAGCACTCGTGGGTAGCTGACATCCAGGGCTGCGTGGACCCCGGGTGAGTGTCCAAGTGGCCCGAAGATGG---GTGGACAGGCTGGGTATATCCTTG-----GTCCAGCC s mm3.chr18 42188734 633 + 91041441 cccgggttcaggtctcagtgctgctgctggctgctatgggacttt-gagcaagttgccctgcctctctgaacgtcaggcttcttgtctataaaataacaattatacatac-aaccctcatagtgttgc----aagaactcaacaga--------------------caaggcgcaagtgcgaagagcactgact-----------------------------gccacGTGACTACAGCAGTAGGATCGCAGTCACTAAGGCCAGGGATCCC-TCAGCTC----TGATGAGCCTGCTGGCCTCCCCCCTTGCCTTGAA--CTGTATCTGGAATGTCAGGGCATGGGTTGAGCATGCTAGCTCTCCTGAC----------CCAG---GGCCTC--CAGAGCCTGCATCTCC-------------------------------------------------------------------------------------TCCCCGGTATGGGCTTCAGGCTGCA------------------------------------GCCTATGAGACCTAACATAGGGGTGGGCAA--AGCCATGCAAACCCTTCTGTTCATTGGTCCTGGGGTGCTGAGCCCGCTCACCTCGCAGTTGGGGAGGTTTCAC---CAGGGCCACTCTCAT--CCAGGTGGAGAACGGAGCAGAATACATCCTGGAAACGATAGACTCACTGCAGAAGCACTCGTGGGTGGCTGACATCCAGGGCTGTGTGGATCCTGGGTGAGTGTTCTGGAGGCCTAAGGATGG-GGCTGGATAGGTGGAGGGGTACCTTG-----TCCTACCC s rn2.chr12 21315840 634 + 46874691 catgggttcaaatctcagtgctgcttctggctgccgtggaacttttaagcaagttgttctgtctctctgagcgtcaggcttctcgtctataaaataacgattatacatac-aactctcacggggttgct---aggaactcaacaga--------------------caaggcacaa------agagcactggcc-----------------------------accacatggccacggcaaCAGACTCTCAGTCACTAAGGCCTGGGATCCCCTCAACTC----TGATGGGCCAGCTGGCCTCCCCTCTTGCCTTGAA--TGGTTTCTGGGATGTTGGGGCGTGGGTTGAGCATGCTAGGTCTCCTGTC----------CCAG---GGCCTC--CAGAGCCTGCATCTCC-------------------------------------------------------------------------------------TCCCCTATATGG-CTTTAGGCTGTA-------------------------------------CCTGTGAGACCTAGCATAGGGGTGGGCAA--AGCTATGCAAACCCTTCTGCTCATTGGTCCTGGGGTGCTGAGCCCCCTCCCCCTGCAGTTGGAGAGGTTTCAC---CAGGGCCACTCTCAT--CCAGGTGGAGAACGGAGCGGAGTACATTCTGGAGACGATAGACTCACTACAGAAGCACTCGTGGGTGGCTGACATCCAGGGCTGTGTGGATCCTGGGTGAGTATTCTGGAGGCCGGAAGATGGCAGCTGGAGAGGTGGAGAGGTGCCTTGTCCTTTCCTACCC a score=15678.000000 s hg15.chr7_random 1003375 276 + 1057565 GATTTTGATGAGAGCTCAGGAAACGGGTAGGTCAGGGACAATG-GGAGCCATGGCAGGTAATAGGCAGAGGGCAGTTACGGTCAGCTGTGAACAGGAAGAGCAGCAAGAAGGTTGGCTCCACCATCCAGGAGAGATGCCAGGCCAGGAGTAGGAGGGATAGGCAGCCCGACAGGCTGAGCAATTGGCAGC------------AGCTCTGCTGGCTAATGGGGTGAGCCAAGCCCCGGGGGGAAGGGCCGCTGCTTTCTAATTAACAGCTTCATTTAAAGAAA-CACAATT s mm3.chr18 42189542 224 + 91041441 GATTCTGATG-------AGGAAGCTGGTAGGCTGGGAGCACGGTGGAGTCACAGTCGGTGACA--CGGTTGGCACTTCTGGTCAGCTGTGAAAAGGAAAAGAA----------TGACCCCACTGTCCAGGGGAGAT-----------ACACAGAGGGA---GCACCC-----AGCTAAGCACTTGGCAGCCCTTTCTCTAACAGTGTTGCTAATAGATGGAGTGGGC-----------GGGTGGGG-----------------ACAGACTCATTTGAATAAAGCTCAGTT s rn2.chr12 21316674 198 + 46874691 GATTTTGAT----------GAAGCTGGCACGCTGGGAGCTCTGTGGCATCATAGTTGGTGTCA--TGGTTGGCACTTCTGGTCAGTTGTAGACAGGAAGAGAG----------TGACTCCACTGTCCAGGGGAGAT----------AACCCTGGGGG--------------------AGCACTTGGTAGCCATTTCTTTAATAG-----------AATGGAGTTGG------------GGGCAGGG-----------------ACAGATCCATTTGAATAAAGCTCAGTT a score=410.000000 s hg15.chr7_random 1003651 74 + 1057565 AA--GGTC---CTGGGCGCCTCCCAGGC--CCTGATCCACAAAGTGATTGTAATCCCTCCTCCACCGCCCTCCGGACCATC s mm3.chr18 42189766 81 + 91041441 AACTGGTCACACACGGCCCCCCACTGGTCACCACACCCCCCCACTGGTCACACACTGTCCCCTACTGGTCACCACACCATC a score=4356.000000 s hg15.chr7_random 1007102 26 + 1057565 TGGTCAATCACACGGTGGCCACAGAG------- s mm3.chr18 42189922 26 + 91041441 TGGTCACTCACACAGTGGCCACAGAG------- s rn2.chr12 21317111 33 + 46874691 CGGTCACTCACACCGTGGTCAGAGAGGGTGAGG a score=86882.000000 s hg15.chr7_random 1007223 635 + 1057565 TGGCCACATAAG---------------TAGCCTGTGGTCCGAGTCCAAGTCCCACGGCAGGACATGGTTTCCATTTCTTGTCTCCACAGTGACAGTGAGGAAGACACCGAGCTCTCCTGTACCCGAGGAGGCTGTCTGGCCAGCCGCGTGGCCTCCTGCAGCTGTGAGCTCCTGACTGATGGTAGGTAGGGGGACAG--GGTTGAAG----GAGGGGCACACTCAGGGT-GGACAGATAAAGATACGTGCATCTTACCTGCCACTTCCCCAGCAGTCGACCTGCCCCGCCCCCCAGAGAC---GACAGCCGTGGGTGCAGTGGTGACAGCCCCCCACAGCCGAGGTCGAGATGCCGTCAGAGAATCCCTGATCCACGTCCCGCTAGAGACCTTTCTGCAGACCCTGGAATCCCCGGGCGGCAGCGGCAGTGACAGCAATAACACAGGTGCCAGTGGGGACAGCCTGCTCTTCCCATCCCACCTCTCCTGGACCCCCACCCCCAGCCATGGCCACCCATGGGCTCCCTAAACCTTGCTAAGCCTCAGAAGCTGTGACATCTCATCCTCCTGGGTCCTTCACACGTCTCCGAAGTACTTCTGGCTTTTGTAGACTGGTCTAGGAACCTGGCCCCTCCCACTGGACCCAGTTTCAATAGAAAA s mm3.chr5 15882766 569 - 149719773 TGGCCACAGAGG-------ACTGGACAGAACTTGATGTCCCATCCCAGGCTCTGTGGTAAGACATGCTGCGTCT------TCTCCACAGGGACAGTGAGGAAGACACAGGACTGTCTTGTGCACGGGGAGGCTGCCTGGCCAGCCGCGTGGCCTCCTGCAGCTGTGAGCTCCTGACAGATGGTAGG----TGGAGAGCAGGCTGGAGTTCTGGGGAATGGCGTTGGAGG-GGAT-----AAGAGACATGCTTCCCCCTC--TATTTCCCCTGCAGCAGACATGCCCCGGCCCCCCGAGACGACGACAGCGGTGGGTGCTGTGGTCACAGCTCCACATGGCCGAGCTCGTGACACCGTGGGAGAGTCCCTGGCCCACGTTCCCCTGGAGACTTTCCTGCAAACCCTGGAGTCTTCAGGTG---GTGTCAGTGAGAACAATAACCCAGGTACCACTGGGG---------------------------------TCCCCACCCCCTTCTACAGGGACCCATGTG----------------GAGCCTCAGAAGTGGTGACATTTCAGCCAGTTGTG-------------TCTACAGTGGTTTTGGCTTTC-TAAGCCAGAACGGGCACCTCGCCTTTCCCACTGTGCCTGGTTTTTATAGAGTA s rn2.chr12 21317126 579 + 46874691 TGGTCAGAGAGGGTGAGGGACGGGACAGAACTTGCTGTCCCAGCCCAGGCTCTGTGGCAAGATATGTTGTGCCT------TCTCCACAGGGACAGTGAGGAAGACACAGGGCTGTCTTGTGCACGGGGAGGCTGTCTGGCCAGCCGCGTGACCTCCTGCAGCTGTGAGCTCCTGACAGAAGGTAGGAGGGGGGAGAGCTGGCTGGAGTTCTGGGGGACGGTGTTGGAGGTGGAT-----GAGAGACATGCTTCCCCCCC-CTACTTCCCCTGCAGCAGACATGCCCCGGCCCCCAGAGACGATGACAGCAGTGGGTGCTGTGGTTACAGCTCCACATGGCCGAGCTCGTGACACCGTGGGAGAGTCCCTGGCTCACGTTCCCCTGGAGACTTTCCTGCAAACCCTGGAGTCTTCAGGTG---GTGTCAGTGAGAGCAATAACACAGGTACCATTGGGG---------------------------------TCCCCTCCCC---CTACAAGGACCTATGTG----------------GAGCCTCAGAAGTGGTGATATTTTAGCCAATTGTG-------------TTGACGGTGGTTCTGgttttc-taagccagtatgagcacctggcctttcccactgtgcctggtttttacagagtc a score=2958.000000 s hg15.chr7_random 1008733 55 + 1057565 GAAAAGAAGA-AAggagggagggaggg----------agggagggaaggaaggagCTCACAGAAAA---- s mm3.chr5 15884630 66 - 149719773 AGAAAAAAGAGATAGAGACAGACAGGGAAagggagggagggagggagggaggTTGTTCATATAGAG---- s rn2.chr12 21318519 58 + 46874691 GGAAGACAGAGAAAGAGACAGATGTGG-----------GGGTGGGAGGGATGT-GCTCATATAGATAAAG a score=12408.000000 s hg15.chr7_random 1008791 163 + 1057565 ------TCcatag---ggt----tggaatcagggattgggaacaggcgactggatttgttcctaag-tttgctgatgacttacagagtaactccaggatagtccttcacagctctgtgcctcagtttacctcatagacttcaccagtgg-gttgggtcagctccctgcccaactctaa s mm3.chr5 15885029 144 - 149719773 TCAAACAAAACAGAAGGATACAAAGGAACCAGGG--TGGGG--AGGAAGGCTGGCTTCTTCTCAGG-----------ACTGGC-------------GAGCGCCCTCT----CCCTATGCCTCAGTTTACCTCAGGG--TTAAATAGTGACAGTCAGTCAGCTCTCTGCCTAGGTCTGA s rn2.chr12 21318837 152 + 46874691 TAAAATAAAACAG---GATACAATGGAACCAGCG--TGGGG--AAGAGAGTTGGCTTCTTCTCAGGTTTTGTTGCTGACTTGC-------------GAGCGCCCCTT----CCCTATGCCTCAGTTTACCTCAAGG--TTAACTAGTGACAGTCAGTCAGCTCTCAGCCTAGATCTGA a score=10368.000000 s hg15.chr7_random 999629 378 + 1057565 GGAAAGGGTGTCGGGAAATGCTGGG--------------------------GCCACTCACTATCCT-TCTTCTGGCC-CCCAGGCCTCCAGGCCCAAGGTCAGCATCCCACTGTCAGCCATCATTGAGGTCCGCACCACCATGCCCCTGGAAATGCCAGAGAAGGATAACACATTCGTCCTCAAGGTGAGGTCTCACCCCTAACCTCAGAGATCCTCCAGCTGCCCCAGGCCACCTTCCCTTTAGGTGCTACAGCTCCCTAGGGGAGCGAGGGGA----AGGAGCCTAAGGCAGGACAGTAGTGGGAGGGAGCCCTGGTGTGGGGGGTTCCCA------GACCCTATGACAGATGCCTAGCACATAGCTAAGACTTGAGTCTGGGCTCCACAGCCA------------------GGTGCCTCGGGCGTCGCCCA s mm3.chr5 15878788 394 - 149719773 GGGAAGTGGGACGGGAAATGCAGAGAGGGTCTTCTAAGGCCTCCGAGGTATGACTCTCACTGTCCCATCCTCTGGCCTCCCAGGCTTCCAGACCCAAGGTCAGCATCCCCCTGTCGGCCATCATTGAGGTCCGAACCACTATGCCCCTGGAAATGCCTGAAAAGGACAACACATTTGTGCTCAAGGTGAG-----------------------TCTGTAGCTGACTTGGACCACAGCCCTACTGGGTTCCCCAGCT-----------TGAGGTCATTCCAGGGGTGCAAGTCAGACCGTCAAAGGGGGAATAC------AGAGGACATTCCCATGATAGGACCCCACGACAGGTCACTGGAGTAGGGCATGAATCTGGGTCTGAGTTCTAGAGCTATCCACCCCAACATGGTTGGCTACCTGGGTCTCCTTCCA a score=12483.000000 s hg15.chr7_random 1000014 410 + 1057565 GGCCCCTTGCTCCCATTTACCCCTGGGCCTGGGCGAAGCTCATCAGTTTCACTTCCTGCCCTCCCTTCCCCCACTGGAGCTAGCACACACCCACCT--CGCTGGTGGCCAGCCGGCAGCAGTTATGCAAATGTTCCT-GTCCCAGGGCACTGGAGTGTGGGAACTGGGCAGTCTCCCACAGAGGGCACAAAGGCATCAAGGGGGGGCGGGGAGGCACCCCTGTGGGTCTAGGGGCAGCCCAGCCTTTCCCAGGCCCCACACCGCTGCCAGGGTGGCCTGCAGGGGTTTCTGAGGACACGGCTCCAGGCTGCCAGAGCTGTGGTCCCTGGGCATCCGCAAAGGATCAGAGGGTGTTGGTGAAGC--AATGTCCCCGGGGAGGCCTGGTCCCACCCACTCATCCTGCATGAAGCCCC s mm3.chr5 15879614 394 - 149719773 AGCCCTGTAC-CCTATTTCTTCTTGGGTCTGAATAAAGGTCATTAG---AGCTGCCTTCCCTTCCTTTCCCT-CTGGAGCCAG-ACACTCCTACCTCACACTGGTGGCCAGCTTGTGGAAGTTATGCAAATGTCTGTAGGCACAGGCAAATGGAGTGTGGGAACAGCCCTGGACCCTACAGAGGGCACAAAGACAC---AGAATGGTTGAGAGGCGCCCCAGTGGGTCAGGGAGCCTCCTGGCCTTTCTCCAAGCCCGTAGCACTT---GGGTGGCCTGTGGGGGCTGCTAAGGACGTGGGTCTAGGCTGCTAAGGTTGTGGTCA--GGACTTCCTGAAGGAACAAGA------CTATGAAGCTGAGTTCCCTCCAGGAGGCC-ATTTCCTCCCACTTAAGCGGTCAGAGCCCCC a score=14175.000000 s hg15.chr7_random 1001102 827 + 1057565 cctgggttcaggccctggccctgccactggctgctgtgtgactttgaccaagttccttggcctccctgaaccttggtcttctcatctataaaatgggggaaatggctcctctccctcacagggccgttgggaggagttgagcagaatgcagggttatgctctgggcctggccccagcaggGATGTCTCCTGCCCTCTTCCCCTTCAGAGGCTTCGTATCTCAAGCGCATGGCCATGCCGGTAGAACTCCAGGCACTAAGACATGCAAGCCCCCCTACTCAGTGTGCTTGGCCAGCCTGTCTCTCCACTCAACTTGAACCCCACCCCTGGGGTGCCAGGGCATGGGTTGGGGATGCTGGGCCACCCATCCCTCCCCCTGCCAGCATGGCCTCCTCAGAGGCTGCGTCTCTAAGGCAGAGGAGCTGAGATCAGTGGGGTGGGACATATCCCCAGTGGGGAGGCCCAGAAGGGAGGGAATACAGAGTGTGAGCTGGGTCCCTGGCCTGAGTTCCAGGTGGTGCCCGATGGTGACCCCACTTTCTTTCCTGCTGCTCATGCCCTTGAGCCCTGCTGTGGGAGAGGGGGATCAGCCATTTGAGCCACTCTGACCCTATGTCCTGTGGTCTGGAGCCCAT--------CTGCTGACCGTGTTCTGCACTCCCGGCCACCTTCCTCCCCAGGTAGAGAATGGAGCCGAATACATCTTGGAGACCATCGACTCTCTGCAGAAGCACTCGTGGGTAGCTGACATCCAGGGCTGCGTGGACCCCGGGTGAGTGTCCAAGTGGCCCGAAGATGGG--TGGACAGGCTGGGTATATCCTTGGTCCAGCC s mm3.chr18 42188734 633 + 91041441 cccgggttcaggtctcagtgctgctgctggctgctatgggactttgagcaagttgccctgcctctctgaacgtcaggcttcttgtctataaaataacaattatacatacaa-ccctcatagtgttgc----aagaactcaacaga---caagg------------------cgcaagtgcgaagagcactgactgc----------------------------cacGTGACTACAGCAGTAGGATCGCAGTCACTAAGGCCAGGGA-TCCCTCAGCTC----TGATGAGCCTGCTGGCCTCCCCCCTTGCCTTGAACTGTATC--TGGAATGTCAGGGCATGGGTTGAGCATGCTAG-----------CTCTCCTGACC--CAGGGCCTCC--AGAGCCTGCATCTCC-------------------------------------------------------------------------------------TCCCCGGTATGGGCTTCAGG------------------------------CTGCAGCCTATG------AGACCTAACATAGGGGTGGGCAA--AGCCATGCAAACCCTTCTGTTCATTGGTCCTGGGGTGCTGAGCCCGCTCACCTCGCAGTTGGGGAGGTTTCAC---CAGGGCCACTCTCATCC--AGGTGGAGAACGGAGCAGAATACATCCTGGAAACGATAGACTCACTGCAGAAGCACTCGTGGGTGGCTGACATCCAGGGCTGTGTGGATCCTGGGTGAGTGTTCTGGAGGCCTAAGGATGGGGCTGGATAGGTGGAGGGGTACCTTGTCCTACCC a score=4813.000000 s hg15.chr7_random 1003375 350 + 1057565 GATTTTGATGAGAGCTCAGGAAACGGGTAGGTCAGGGACAATG-GGAGCCATGGCAGGTAATAGGCAGAGGGCAGTTACGGTCAGCTGTGAACAGGAAGAGCAGCAAGAAGGTTGGCTCCACCATCCAGGAGAGATGCCAGGCCAGGAGTAGGAGGGATAGGCAGCCCGACAGGCTGAGCAATTGGCAG------------CAGCTCTGCTGGCTAATGGGGTGAGCCAAGCCCCGGGGGGAAGGGCCGCTGCTTTCTAATTAACAGCTTCATTTAAAGAAA-CACAATTAA--GGTC---CTGGGCGCCTCCCAGGC--CCTGATCCACAAAGTGATTGTAATCCCTCCTCCACCGCCCTCCGGACCATC s mm3.chr18 42189542 305 + 91041441 GATTCTGATGAG-------GAAGCTGGTAGGCTGGGAGCACGGTGGAGTCACAGTCGGTGACA--CGGTTGGCACTTCTGGTCAGCTGTGAAAAGGAAAAGAA----------TGACCCCACTGTCCAGGGGAGATACA-----------CAGAGGGA---GCACCC-----AGCTAAGCACTTGGCAGCCCTTTCTCTAACAGTGTTGCTAATAGATGGAGTGGGC-----------GGGTGGGG-----------------ACAGACTCATTTGAATAAAGCTCAGTTAACTGGTCACACACGGCCCCCCACTGGTCACCACACCCCCCCACTGGTCACACACTGTCCCCTACTGGTCACCACACCATC a score=2165.000000 s hg15.chr7_random 1007102 26 + 1057565 TGGTCAATCACACGGTGGCCACAGAG s mm3.chr18 42189922 26 + 91041441 TGGTCACTCACACAGTGGCCACAGAG a score=22156.000000 s hg15.chr7_random 1007223 635 + 1057565 TGGCCACATAAG--------TAGCCTGTGGTCCGAGTCCAAGTCCCACGGCAGGACATGGTTTCCATTTCTTGTCTCCACAGTGACAGTGAGGAAGACACCGAGCTCTCCTGTACCCGAGGAGGCTGTCTGGCCAGCCGCGTGGCCTCCTGCAGCTGTGAGCTCCTGACTGATGGTAGGTAGGGGGACAGGGTTGAA------GGAGGGGCACACTCAGGGTGGACAGATAAAGATACGTGCATCTTACCTGCCACTTCCCCAGCAGTCGACCTGCCCCGCCCCCCAGAGACGAC---AGCCGTGGGTGCAGTGGTGACAGCCCCCCACAGCCGAGGTCGAGATGCCGTCAGAGAATCCCTGATCCACGTCCCGCTAGAGACCTTTCTGCAGACCCTGGAATCCCCGGGCGGCAGCGGCAGTGACAGCAATAACACAGGTGCCAGTGGGGACAGCCTGCTCTTCCCATCCCACCTCTCCTGGACCCCCACCCCCAGCCATGGCCACCCATGGGCTCCCTAAACCTTGCTAAGCCTCAGAAGCTGTGACATCTCATCCTCCTGGGTCCTTCACACGTCTCCGAAGTACTTCTGGCTTTTGTAGACTGGTCTAGGAACCTGGCCCCTCCCACTGGACCCAGTTTCAATAGAAAA s mm3.chr5 15882766 569 - 149719773 TGGCCACAGAGGACTGGACAGAACTTGATGTCCCATCCCAGGCTCTGTGGTAAGACATG----CTGCGTCTT--CTCCACAGGGACAGTGAGGAAGACACAGGACTGTCTTGTGCACGGGGAGGCTGCCTGGCCAGCCGCGTGGCCTCCTGCAGCTGTGAGCTCCTGACAGATGGTAGGTGGAGAG-CAGGCTGGAGTTCTGGGGAATGGC--------GTTGGAGGGGATAAGAGACATGCTTCC--CCCTCTATTTCCCCTGCAGCAGACATGCCCCGGCCCCCCGAGACGACGACAGCGGTGGGTGCTGTGGTCACAGCTCCACATGGCCGAGCTCGTGACACCGTGGGAGAGTCCCTGGCCCACGTTCCCCTGGAGACTTTCCTGCAAACCCTGGAGTCTTCAGGTGGT---GTCAGTGAGAACAATAACCCAGGTACCACTGGGG---------------------------------TCCCCACCCCCTTCTACAGGGACCCATGTG----------------GAGCCTCAGAAGTGGTGACATTTCAGCCAGTTGTGTCT-------------ACAGTGGTTTTGGCTTTC-TAAGCCAGAACGGGCACCTCGCCTTTCCCACTGTGCCTGGTTTTTATAGAGTA a score=2123.000000 s hg15.chr7_random 1008733 55 + 1057565 GAAAAGAAGAAA-----------ggagggagggagggagggagggaaggaaggagCTCACAGAAAA s mm3.chr5 15884630 66 - 149719773 AGAAAAAAGAGATAGAGACAGACAGGGAAagggagggagggagggagggaggTTGTTCATATAGAG a score=1255.000000 s hg15.chr7_random 1008791 163 + 1057565 TC--------catagggtt-----ggaatcagggattgggaacaggcgactggatttgttcctaagtttgctgatgacttacagagtaactccaggatagtccttcacagctctgtgcctcagtttacctcatagacttcaccagtgg-gttgggtcagctccctgcccaactctaa s mm3.chr5 15885029 144 - 149719773 TCAAACAAAACAGAAGGATACAAAGGAACCAGGG--TGGGGA-GGAAGGCTGGCTTCTT-----------CTCAGGACTGGC-------------GAGCGCCCTCT----CCCTATGCCTCAGTTTACCTCAGGG--TTAAATAGTGACAGTCAGTCAGCTCTCTGCCTAGGTCTGA a score=17344.000000 s hg15.chr7_random 1010028 399 + 1057565 CATTATTCCAACAGCATTTTGCATGTAAAAAAACCAACAAGACGTCACCTCTCTTCTCACATTTATTTATTTGTCCCCCTT-TCTCCTTCCCCCCATGTTCCTCACACTGTCATCCCCACCTCAGGGGAACAGGGTGCAGAGACGGATCCCGAGGCTGAACCCGAGCTGGAGCTATCCGACTACCCATGGTTCCACGGGACACTGTCCCGGGTCAAGGCTGCTCAACTGGTTCTGGCAGGGGGGCCCCGGAACCACGGCCTCTTCGTGATCCGCCAAAGTGAGACTCGGCCTGGGGAGTACGTGCTGACCTTCAACTTCCAGGGCAAGGCCAAGGCAAGTGTGTG-------------------GGGGGCGCCATGGGGGT-GCAGTGGCCAGC--CCTGAGGGAGAGGGGTCATGGTGACC s mm3.chr5 15885173 406 - 149719773 TGCTATTCAAATGGCAATTTACCC------AAATCAACAAGATG-CACCGCCATCTTCAC--TAACTTCTCTGTCTTCCTTCTGACCTTCTGTCCCTGT-------GCTATTGCAACCAACCCAGGGGACGAAGGAGCTGAGCTGGACACCGATGCTGAGGCTGAGCTGGAACTTTCCGACTACCCCTGGTTCCATGGGACATTGTCCCGGGTGAAGGCGGCCCAGCTTGTGCTGGCCGGTGGCCCTCGGAGCCATGGCCTCTTTGTGATCCGCCAAAGTGAGACTAGGCCTGGGGAGTGTGTGCTGACCTTCAACTTCCAGGGCAAGGCCAAGGCAAgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgGTGGGGGTGGCAGGGGACGGCAGCCTAGAGGAAGTGGATTGAGATGGCC a score=13262.000000 s hg15.chr7_random 1012647 126 + 1057565 catgttgagcaaaatagggcttaagtcagagacctgcagctctccactagacaccACAGGCCTATGGTTTCTTACCCTGAGGCACCTGCCTCACACAGGCCCTAGAGACCTAGAGAGAAGCCAGCC s mm3.chr5 15886886 126 - 149719773 CATAGTGGGATAAGTTGGGCTGACACCAGACACATGTGGCCCACTATTCAAGACCACAGGTCTAAGGCCCCTTACACTGAGACCTCTACCCCAGGTAAACTCAGGAGACACAAAGAGGAGCCAGTC s rn2.chr12 21321013 106 + 46874691 -CGAATGGGATAAGTGGGGCTGA------------------CACTACTAAAGACCACAGGTCTAAGGCTCCTTACACTGAAGCCCCTATCCCAGGTAATCTCAGAGAAC-CAGAAAGGAGCCAGTT a score=62721.000000 s hg15.chr7_random 1013138 347 + 1057565 CCCCATCTCCAGATGGGGCTCATGTGTGAGGGGCCCCCGGCCCTGACACAGCCCCATACAGCCCCTG----TGAGCCTTGGTCCTTCCATCAACCCCCAAAGGCGCTTACC---CAGGTGCCCAGCCCCGGA-CCTGCCCCTGACCACACCCACCTGTACCCACAGCACCTGCGCCTGTCCCTGAACGGCCACGGCCAGTGTCACGTACAGCATCTGTGGTTCCAGTCTGTGCTTGACATGCTCCGCCACTTCCACACACACCCCATCCCACTGGAGTCAGGGGGCTCGGCCGACATCACCCTTCGCAGCTATGTGCGGGCCCAGGACCCCCCACCAGGTAAGATGCCGCCACCT s mm3.chr5 15887362 352 - 149719773 CCCCACCTTCAGATGAGGCTCA-GTGTG-AGGACCCCTAAGGATGACACAGTCCCATAGAGTCAATGGAGCCGATGCATGGAGT-CCCAGCAACCACCAAAGGCACTTGCCACGCAGGTAGCTGGCCCAGGACCCCACCACTGACCACTCCCATCTGTGCCCACAGCACCTCCGCCTTTCTCTGAACGGTCACGGCCAGTGTCATGTCCAGCACCTGTGGTTCCAGTCCGTGTTTGATATGCTCCGTCACTTCCACACCCACCCCATCCCCCTGGAGTCAGGAGGATCGGCTGATATCACCCTAAGAAGCTATGTGCGTGCCCAGGGCCCGCCTCCTGGTAAGATGCCACTGTCT s rn2.chr12 21321833 350 + 46874691 ACCCTCCTTCAGATAAGGCTCA-GTGTG-GGCACCCCTAAGGATGACACGGTCCCATAGAGTCAATGGAGCTGATGCATAGTCC-TCCAGCAACGGCCAAGGGCACTCGCCAAGCAGGTAGCTGGCCCAGGACCCCGCCACTGACCATTCC-ATCTATGCCCACAGCACCTTCGCCTTTCTCTGAATGGTCACGGCCAGTGTCATGTCCAACACCTGTGGTTCCAGTCGGTGTTTGACATGCTTCGACACTTCCACACCCACCCCATTCCCCTGGAGTCAGGAGGATCCGCTGACATCACCCTACGAAGCTACGTGCGTGCCCAAGGTCCACCTCCTGGTAAGACACCAC-ATCC a score=65798.000000 s hg15.chr7_random 1014249 348 + 1057565 GTCGCCTTGTTGCAGAGCCGGGCCCCACGCCCCCTGCCGCGCCCGCGTCCCCGGCCTGCTGGAGCGACTCGCCCGGCCAGCACTACTTCTCCAGCCTCGCCGCGGCCGCCTGCCCGCCTGCCTCGCCCTCCGACGCCGCCGGCGCCTCCTCGTCTTCCGCCTCGTCGTCCTCTGCCGCGTcggggcccgcccccccgcgccccgTCGAGGGCCAGCTCAGCGCGCGGAGCCGCAGCAACAGCGCCGAGCGCCTGCTGGAGGCCGTGGCCGCCACCGCCGCCGAGGAgcccccggaggccgcgcccggccgcgcgcgcgccgTGGAGAACCAGTACTCCTTCTACTAGC s mm3.chr5 15888171 339 - 149719773 GCCCTCTCATTACAGATCCAGGACCAGCGCCCAACACTGCGGCCCCAGTTCCAGCCTGCTGGACGGAGCCGGCTGGCCAGCACTACTTCTCCAGCCTGGCCACGGCCACTTGCCCGCCCGCTTCACCGTCCAATGGCGCTGGAGCTTCGTCTTCATCCGGCTCATCGTCCTCTGCCACAT------CCCTGCCCCCACGCCCAGCCGAGGGGCCGCTCAGTGCGCACAGCCGCAGCAACAGCACAGAGCACCTGCTGGATGCTGCATCTG---GAGCCACTGAGGAGCCCACAGAGGCCACGCTGGGCCGTGCTCGTGCTGTGGAGAATCAGTACTCCTTTTACTAGC s rn2.chr12 21322790 339 + 46874691 GCCCTCTCATTGCAGATCCAGGACCAGCGCCCAACACTGCAGCCCCGGTCCCGGCCTGCTGGACGGAGCCGGCTGGCCAGCACTACTTCTCCAGCCTGGCCACGGCCACCTGCCCACCCACTTCACCCTCCAATGGCGCTGGAGCATCGTCGTCATCCGGTTCATCATCCTCTGCTACGT------CCGTGCCCCCACGCCCAGCCGAGGGGCCACTCAGTGCGCGCAGTCGCAGCAACAGCACAGAGCACCTGCTAGAGGCTGCATCCG---GAGCCACTGAGGAGCCCGCAGATGCCACGCTGGGCCGCGCTCGCGCTGTGGAGAATCAGTACTCCTTTTACTAGC a score=29431.000000 s hg15.chr7_random 1014597 356 + 1057565 CCGCGGCGCCGCCCGGGTGGGACACGCCAAGCTCTTCAGTGAAGACACGATGTTATTAAA-AGCCTGTTTTAGGGACTGCACCCGGCTCTCCTGTCGTCCTTTCTC----------CCACGGGGAAGGCGGGGACTGCGGGGCAGCCACTCTCAGAGACCCCCGTCCATCAGGGACCCCCGTCCAGCCCAGTGTGGCCTGACACCTGCCAGGCCCCCTTGCAGCTCTGTCTCTGGTGGGACAGCTGAGG----------GACTCCCCATGGGGCGTCGGGCAGCACCTGAAAGAGGGCCCAACAGCAAGGGTTAGGGCTTAGGATCGGGAGGGGGCTTTACTGGAGCTGTGAGGGAGAGA-----GATGGGAGGTGGTAACA s mm3.chr5 15889113 302 - 149719773 -CCCAGCCCAATGCTGGGGGGAAAAGCCAAGCTCTTCAGTGAAGACA-AACATTATTAAAGAGCCTGTTTTAGGGACTACCCCCTGCTCTCCTGTGGTCATTCTACTGTGCTGTCACCACTGGGAAGGAAGTG-----------------------GTCTCCCTGTGATCTGGAACTGCCA-------CACTGCCACAGG---CTTGCTAAG--C-----CAG----ATCTTACAGGAGGCAGGTGGGATGAAGAGCCCGACTC-----AGGGAGT--------------------------CAGCTGTGGGCGGGGCATGGATGGAGGGGCAGAC-TGAAGGGAACTGGAAAAGAGAGA--TAATTTGAGGAATGAAACCA s rn2.chr12 21323729 297 + 46874691 -CCCAGCCCAACGCTGGGGGGAAAAGCCAAGCTCTTCAGTGAAGACA-AACATTATTAAAGAGCCTGTTTTAGGGACTACCCCCTGCTCTCCTGTGGTCATTCTACTGTGCTGTCACCACTGGGAAGGAAGTG-----------------------GTTTCCCTGCGATCTGGAATTGCCA-------CACAGTGGCCGG---CTTGCTAAGCCC-----CAG----ATCTTAGGGGAGGCAGGTGTAG----------GACTC-----AGGGAGT--------------------------CAGTTGTGGGCGGGGCCTGGACGGAGGGGCAGACTTGGGTGGAACTGGAAAAGAGAGAGGTAGTATGAAGAATGAAACCA a score=17034.000000 s hg15.chr7_random 1016042 244 + 1057565 GCAGATTTCAGATCCCTAGACATCTAAAGCTCTCAGGACTGTAACTAAGA----CACAGCCTCTTCCCCATAAAAGGGGCATGAACACCCTTGGGTGGCTCCCAGGGCTT--------TCAGCCACCCAGTCCCCATGCACAACATCATCAGGAAGTGACAGAGTAGGGCCCCCTGCTACCACCATGATGAGGGAAGAATACAAATTCAGCGATCAGGAGAGCACCCTGCTACCTCTGCTTCTAGCACCTCCATTC s mm3.chr5 15890057 203 - 149719773 ACAGG--------CCCGGAAAAGCTAGAGACTCCAGAGCGTCAGGCGAGACACCCACAGCTGCTTCCCCATAAGGGGAGC-TGAGTACCCTGCGGTGGCTCCAAGAGCCTTGCTGGTTGCAGCTG-CCGG---------------------GAAAATGAC-----AGAGCACACTGCTAAGCACGCG-TAAGGGAGAAATGC----------------AAAGCACAATGCTAAGTCAGCTTTTAGCAGCTCCAGTT s rn2.chr12 21324643 188 + 46874691 ACAGA--------CCCAGAAAAGCTAAAGACTCCAGAGTGTCAGGCGAGACATTCACAGCTGCTTCCCCATGAGGGGTGC-TGACTACCCTGCGGTGGCTCCAAGA------------GCAGCT--TCGG---------------------GGAAGTGAT------GAGCACACAGTTAAGCACATG-CAAGGGAGGAAAGT-----------------AAGCACAATGCTAAGTCAGCTCTCAGCACCTCCAGTT a score=228.000000 s hg15.chr7_random 1016286 166 + 1057565 GGTTGTGGCTGGAGTCCTTCTGCCCCCGTGCCCTGGTGGTTTGGGGTCTATGCTAGGCCAAGTGCAAGTCCCCATTCCACTCCAACAAGAACAGAGCGGGCTCTGGACTGAG-GCTTGG-GCTGGGCAGACGAACAGGGGCAGACTTAAGACTTAGACCCACCAGGTg s mm3.chr5 15890260 127 - 149719773 GGTTGTGGCTGGGGGCCCACTT----------------------------TGCTAAGTCAGTTACAGGCCTCCATCTTACCTT------GAGAGAAGGGACCTGAGAGTAAATGTTTGGAGCTCTGTCAGCTTTT-----CAGAATTGAGGCCTAGAAT--ATAAGCG a score=48292.000000 s hg15.chr7_random 1016994 518 + 1057565 CCTGGGGTGTTCCCAGGTTAAAGTGAATTCGGGGGGGGACAC-CAGAAGTTGATACTGTGACTGCCCCCCCCCGGGCTCTCCCAAGGGATGCAGCAGGAAGGCCCAGGAGGTC--------AGTGAAAAGGGGGCTCTCTCTTCAGTA--TGGTCACCAGCGTG----AGATCCTCA-AGCTGTCACTCAAGAGGGTGGTTCCAGATAGCCCAGACTCAGTGGGGGCTCTGGCGAAATCACAGCCATTGCACAGACGGCAGCAACATTTTCAAGGGGGTTTCATTTGTTCCTCAACAAGCATTTCAGATGCCT-GCTCTGCGCCAGGCCAGGCCCATGGGGTAGCTG-----------------AGCCA------------------------------------AGCTTTGGGACCACAAGTGCCCTGGCTGAC--CTGTGACACTGGGTGTCGCAGACATGGGGGACTGCAGGCGCA-GGAGCAGCGAGGTGGGATATGAGACCTGCAAGGTAGAGAGAGCCTTGAATGCCAGGCCAGGGAGTTTG----------GAACGTGCTGAGA--GCCAGTGCCAATTA-AAATGGGAGCTGAGAT s mm3.chr5 15890910 508 - 149719773 cCTGTGGTGTCCTCAGGCTAAACTGGATCCAAGAGTTAACAAGTGGGAGGCAATAAGGTAACCCC-TCCC------CTCTCCCAAAGGTCACAGCAGAAA-------GAGCGC--------AAGCAATAAAGGACTCTCTCTAATGTAGTGGGACACTGAGGCAAGACAGACCCTCATGCCTGTCACTCACAGGG-----------------------------------------ACCACAGCAGTGGCACAGCTGGCAGGGGCATCTCTTAGGTGTCTTCGTTTGTCCCTCAATGGGCATTTCAGAACCCTGGCTGTGTGCCAGGCAAGGCTCGTGGGACAACTGGGCAGACAGCCAGACCAAGCCATTGCAGCATGGTGGTCAACCATAGAGGGCTGGGCTGAGCCCTGGGACCGTATGTGTTCTGCCTAATGGTCCTGAGGCTGGGGGT---------GGGGTGCTGCAAGTTCACGGGGCAGCA----------------------GGTGGAGAGGGCCCCAAATGCCAGGCCAGAGAGTTTGGTTTGGAAGAGAGTGTGATCAGA--GTCTGTGCCAATTACAAATGGAAGGCGATGT s rn2.chr12 21325718 502 + 46874691 cCTGTGGCATACTTGGGCTAAACTGGATCCAAGAAGCAACATGTAGGAGATAGCAAGGTGACCCCCTCCA------CTCTCCCAAAGGTCACAGCAAAAA-------GAGTGCTCTAATGTAGAGAGCAAAGGACTCTCTCTAATGTAGCGGGACACTGAGGCAAGACAGACCCTCA---------CTCGCAGGG-----------------------------------------ACCGCAGCAGGGCCACGGCTGGCAGGGACATCTCTTAGGTGTCTTCGTTTGCCCCTCAATGGGCATTTCAGACCCCTGGCTGTGTGCCAGGCAAGGCTCATGGGACAACCAGGCAGCCAGCCAGACCAAGCCATTACAGCGTAGTGGTCAACCACAGAGGG------------CTGGGACCGTACGTGTTCTGCCAGATGGTCCTGAAGCTAGGGGG--TAGGGGAGGGGGGCTGCAAGTTCA-AGGGCAGTG----------------------GGTGGACAGGGTCCCAAAGGCCAGGCCAGAGAGTTTGGCTTG--AAAGAGTGAGATCAGAGGGTCTGTGCCAACTACAAATGAGAGGCGATGT a score=1957.000000 s hg15.chr7_random 1018034 18 + 1057565 GTTATATTTT--TCT---------TTTTT s mm3.chr16 82292414 29 - 98986639 GTTTTATTTTTATTTTCCACTGTATTTTC s rn2.chr11 86639806 27 - 88445885 GTTTTATTTC--ATTTCCACTGTATTTTC a score=516.000000 s hg15.chr7_random 1018052 8 + 1057565 ---TTTTTTTA s mm3.chr16 82292443 11 - 98986639 AGCTCTTTTTA a score=7233.000000 s hg15.chr7_random 1018061 120 + 1057565 GGGGCATGGTGTGACCGTGCTTTCATGGTCTGTCTTCCTACTGAAAATCAACATCAATCGAGCTTCTGCCTTCCTGCTCCGGGGAAGGGTTTTTTGTCCTCCCTGAGATCACCTTAGACC s mm3.chr9 704400 118 - 124467299 GAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTCCTACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGCTCCACGGGAGG--TTTCTGTCCTCCCTGAGCTCGCCTTAGGCC a score=296.000000 s hg15.chr7_random 1018181 29 + 1057565 CTATTGGGCACTTCTAACTTAGAAAAGTT s mm3.chr18 118481 24 - 91041441 tcat-----gcttttaaccaaaaactgtt a score=20288.000000 s hg15.chr7_random 1020057 161 + 1057565 AAAAAAAATGCTCTCTCATTCAAGGTTACCC-TTCTATTACTCCAAGGATTCAC-CCCATAATCTTATCTTTCTTGATATGT-TACATTCACTGAAATGTTCACATCAAATCAAGTTTGTAGACACTTGTCCTTA-----CCACCTTACAAAAAGTGAGATGGTATCAA s mm3.chr5 13877086 169 - 149719773 AGAATAGGAGCACTCTCCTCTGAGGGCCCTCTTATTGTCACTGTAGGGGTTCATATCCACTGTCTTATCTTTATTGCCTCACATATGCTAGATAAAATGCCAACAACAAACTAAATTTGTAAATTCTGATCTTTATTGTCTCACCCTACAAAGAATCAGATGGTATCAA s rn2.chr12 29133060 164 - 46874691 AAAATAGGCACAGTCTCCTCTGAGGGCCCT--TACTGTCACTGTAGGGGTTCATATCCACTGTCTTATCTttattagcttacatatgctcagtgaaatgccaacaacaaattaaatttgtagattctgacccttattgtctcaccctacaaagggtgag---gtatcaa a score=35972.000000 s hg15.chr7_random 1020219 252 + 1057565 AGAGGTGAGACACGGCTTTACCTGCATGTCACTTTTGGCAGCTTTCACAGCATTGAAAAGATCATTGGCTGGTGGCTCTGACTGTTTCCGGCTATG---ACGATGTACCACTCGGGACCCTTTCTTTGGTTG-TTTGCCACCTAATATGTATAAAAAGATCAGAAATATGAAAAAGAGGTAACAGTGACATTAACACTTGGTCTCATCATTATCAC-ACAAGTAGGCTTACGCTGCCCATTCCACAGCACAGTCTGA s mm3.chr5 13878122 255 - 149719773 AGAGGTAAAACACTTCTTTACCTGCATGCAACTTCTAGCAGCTTTCACAGCATCAAAAAGGTAATTGGTTGATGGCACTGATTCATTCTTGCCATTCCCACTAGATACTATTCGGGACTGCTTCTTCCGATGTTTTGCTGCCTATTAAATGTAAAAATATTAG--CTGTACAAAAGCTGTAAAAATAATGGTAACATTTGATTTCATCATTATCACTTTAGGTAGCCTTAAGTCGTCAATTCCACAGCAATGCTTCC s rn2.chr12 29134112 251 - 46874691 AGTGATGAGACACTTCTTTACCTGCGCACAACTTCTAGCAGCTTTCACAGCATCAAAAAGGTCACTGGTTGGCGGCACTGACTTGTTCTTGTCATTCCCACCAGGTACTATGTGGGACTGCTTCTTCGGATGTTTTGCCACCTATTAAGTGTAAAAATGTTAG--CTGTACAAACACTGT-AAAATGATGCTAACATCTGATTTCATC---ATCACTTTAGACAGCCTTAAGCTGTCGATTTCACATCAAGGCTTCC a score=1236.000000 s hg15.chr7_random 1020471 220 + 1057565 GTTA--GACTCAGTCCTGAAATAATTGATTT--TTATACTGTTATGAAGTTT---------AACTTTTTTCCCTTAAAAAAAAAAGTCCTTGAGTCCCCTTCCTATATCTCTATATCCTAACGTCCTTTTCTCTTCTTTTCTCTTCAAAATTTCTCCTCTTCCTATTTCCGTCCCTTAATACTTTGTAAATCTTGTCCTTTTTTGAACCATATCACCTGAACCTCTTTTAAGt s mm3.chr5 13878377 148 - 149719773 ATTATTGTTTCAGATCTTAAGTAACTGGTCTCTTTTTAATGTTGTGAGATTTGTTATCATTAACCTTTTCTTTTTTTAAAAAGAA--------------TTCTGGTACCTCTAT--CCTAATATTCTCTCTTCTTCCATTCC---------------------------------------------------------------------ATCACCTGAGTCCCTTCCAGGT a score=6668.000000 s hg15.chr7_random 1020831 173 + 1057565 CTGCTTCCCCCACAAGATTCAAAAACAAAAGAAAACTGGCTGACTCACCGGTGTTGTTTTCGGTGGTCGTTTTGCTGCTTTCTTCTTCACATTGCGATTGAAGCTATCTTCAAAGTCACTGCCTTCATCAGCTAATAAAGAGTCAGTATTCCTGT-GAGAAAGTACCGTTCTCT s mm3.chr5 13878534 166 - 149719773 CTAATTCCCAGAGTAGATTCTGAATTAAACAAAA--TGGCAGACTCACTGGAACAGCTTTGGGTGGTTGCTTTGCTGCTCTCTTCTTCACATTTCGTCTTAAGCTGTCTTCAAAGTCGCTGTCTTCGTTAGTT------GAGGGACTATCCCTATAGAGAGAATATGATTTCCC a score=9932.000000 s hg15.chr7_random 1021004 148 + 1057565 TTAAATATAACCACCCTAATTCCCTCCATATAAAAGGCTAATGAATTAGTTTCT--CTGTCTCTCACTGCACCCCATCTCCATGAG-AAAAACATATTCAGATTTTAAGAAAAAATGAGCTTATTGTTAGTAGGAAGTTGGGATAAAGTCt s mm3.chr5 13878700 105 - 149719773 TTAAGCATCATCCC----ATTCCTGCCACATAAAGAGTTAATTA--TAATTTCTATTTATCTCTAACTGTGCCACATCTATATGAGGAAAAAC--ATTCAAATTTTAAGATAC-------------------------------------- s rn2.chr12 29135823 100 - 46874691 TTAAGTATCATCCC----ATCTCCTCCACATAAAGAGTTA------CAATTTGTACTGATCTCCAACTGTGCCACATCTACATGAG-AAAAAC--ATTCAAGTTTTAAGAGAT-------------------------------------- a score=8910.000000 s hg15.chr7_random 1021401 72 + 1057565 --AGGACAAAGTCTTAAAGGAAAACTTTCACATGAAAGCAATGGAGACGAAGAATGAGGAAAT--GAGGAGGGGAA s mm3.chr5 13878805 62 - 149719773 --AGGACAA----------GAAAA--GTCACTTCAAAGCATTAGAGATGAAAAATGAGGAACTAAAAGAAGGTGAA s rn2.chr12 29135923 64 - 46874691 AAGGGACAA----------GAAAA--GTCACTTCAAAGCATTAAAGATGAAAAATGAGGAACTAAAAACAggtgaa a score=50389.000000 s hg15.chr7_random 1022283 431 + 1057565 AGTACAGCACTTCTGGTGTTTTCACACAGTCCCACGCATATTATCATCAATGTGGGAAAACG---AGGGGGAAGGCTGCCACGGACACAGGAAGTGGCCGCACAATGCA--ACATCT----------ACTTACC-CTCTGAGGGATGGTTTGAGTCCCTGTCATCGAAGGGTAGACTGGCAGAGGAACTAGAAGATGCAGACAAGGCCCTCTTGGTATCTCCCACAGCTCTCTGCAGTGGGGAAGACATGCTTGGCGAGGAGGAGCTATGGGGCCAGGAAGACGAGGACCGCAGGGTAGGTTTGGCAATCCAGCTGGGGAAGAAAGAGAAGAAAGGGCTCCTACCACAGC---ATTTCTCCATCCCCAGCCGTGAGCAGTCCCTTTCTTTGCAAGGGAATGGTTCTAGAACTCTGGGGTCGGGTGAGGGGGACCAAA----------AACTAAGACAAAg s mm3.chr5 13879127 432 - 149719773 AGTACAGCATTTCTGATACTGTCATATGGCCCCACATACACTA-CAACCATGCTAGAAAACAACAGAGAGGAAAGCTGCTGGGGATGCAGAAGGAGCTCCCAAGTTCAG--ACCTCTCACCAACGGCACTCACCACTCTGCAGTTCCCTGTGAGTCTCTGTCATCACAGGGTAGGATGGAGGAGGAACAAGG------AGACAAGGCCATCTGTGCACGTCTCACAGACTTTTGAAGTGGGGAAGACTCACTGCCTGAGGAAGAGCCATGGTGCTGGGTAGAAGGTGACCACAGAGTAGGCATGTTAATCCAGCTGTAGGAAAAA---AGGAAAGAGTTCCTACTACTACTATATCCCTC---------TATAGACCATCATCTTTCTCTCCCAGAATGTGGTCTCAGTACTATGGGAT-------AGAGCACCAAAACCAATAGTCAACCTAACCACAT s rn2.chr12 29137046 420 - 46874691 ACTACAGCTTTTCTGACACTGCCATACAGCCCCATATAT--TA-TACCCAAGCTAGAAAACA---GAGAGGAAAGCTGCTGGGGATACAAAAGGGGCTCCCAAGTTCAACTGCCTCTCACCAACTGCACTCACCATTCTGCAGTTCCCTGGGAGTCTCTGTCATCACAGGGTTGGATGTTGGAAGAACAAGG------AGACAAGGCCATCTGTGCACATCTCACAGACTTTCGAAGAGGGGAGGACATACTGCCTGAGGAAGAGCCATGGTGCTGGGTGGAGGGTGACCACAGAGTAGGCATGTTAATCCAGCTGTAGGAGAAA---AGGAAAGAGTTCTTACTACTCC---ATCCCTC---------TCGTGACCATCACCTTTCTCTCCCAGAATGTAGTCTTAGTA------AAT-------GGGGCACCAAAACCAATAGTCAACCTGACCACAT a score=4294.000000 s hg15.chr7_random 1023027 55 + 1057565 GGAGACATTATAGGAGGCAAGTCTGCAAAGCCTTAACTACAAACTAAAGAAACCA s mm3.chr5 13879559 55 - 149719773 CGAGGTATTATGGTCACTACTGCTATAAGGGCTTGCAAACAGAAACCTGAAACTA s rn2.chr12 29137466 55 - 46874691 TGAGGTACTACAGTCACTACTGCCTTAAGGGCTAGTAAACAGAAACCAGAAActa a score=16706.000000 s hg15.chr7_random 1028411 137 + 1057565 AGATTCTTAGCAAGGTAGAACGAAGAGTAAAGAGGtttg----tttatttcacaagggtttattgaaggcctacgatgtgttaaatgctgtAGGAAATACCCACTGATTTCTCTTTCATGGAGGTTTCCTGCCTTCTCTTA s mm3.chr5 141582569 139 + 149719773 AGGTTCTGTGCAAGGTAGATTGAAGAGAAAAGAGGTTGGTTGGTTTATTTCACCAGGGTTT-TTGGAAGTCTACTATATGTCAGACCATATGGAAAATACCCTAAAATTGTTACTGCAAGGATG-CACCTATGTTCTGTTA s rn2.chr12 35069760 127 - 46874691 AGGTTCTGTGCAAGGTAGATTGAAGAGAAAAGAGGCTTGTTTATTTATTTCATCAGGGTTT-CTGGACGTCTAGT------------GTATGGAAAATACCCCCAAATTTTTACCACAAGGATG-TACCTATGGTCTATTA a score=16075.000000 s hg15.chr7_random 1029117 120 + 1057565 GAAGGTAGTTTTGGGCCCAGTGATGACTAGATTTTAAATTTCATATAGTAGGAAGTGGGGCACTAGTAAATTTTTAAGCAGAAGAATTATTT--GACCAGATTTGTGATTTCAAAAAT----------------AGCT s mm3.chr5 141582775 137 + 149719773 GATAGTAGATTGGGACCTTGTCGTTGCTAGACTTCAAACTTCATATGATAGGCAAT-GAGCACCACTAAAAATTTAAACCTAAAGATTTTTTTCGACTGGATTTGTAATTGTAAAAAGAAATTGGTGGGAATCAAGCc s rn2.chr12 35069954 130 - 46874691 GACAGTAGATTGGAAC---GTCATTGCTAGACTCCAAACTTCATATGATAGGCAAT-GAGCACCACTAGAAATTTAAACCTAAAGATTTTTT--GACCGGATTTGTGATTT--AAAAAAAGTTGATAGGAATCAAGCc a score=21447.000000 s hg15.chr7_random 1029237 246 + 1057565 CTGGTGATAGAGTGGAGGATGGCTTGGAG---------------------------CAGGGAATAAAGG-----------------------------GCAGTAAAACTGTTAT--------------AAAACTCTTAAAGCTAGTACAGCAAGACTTTGAGGGTCTTTGCAAAGACAGCAGCTGGCAGCTTCAATTTGGAGTAGGGTATCAAAGGCAACTGTGTATAAGGAATAGTTATGTAACTGGTACCCAATTTCTGGAGATGATTTTGACTTAAACATTGTGTATTTCCAGCATAATGTTGGTTTTCCAAG s mm3.chr5 141583027 288 + 149719773 CTGGTGGTAGCAATCAGGGTAAACTGGAGACAAAAAGGCGATTACCCTAGGCCAGCCAGGACAGAAAGAGACTTAACCCGTTCGCTGAGTGTGGTCGTGAGGTGGGACTATCATTTGGAGGCTGAGAATGAACTCTTGTCTCAAACAT----GAGCTCTGAGGACTTTCATCAGAGCAGT-GTAGGCAGCATGGATTTGGGTACAGGTTTCAAAAGCAATTATG-----AGAATAGTTACATAGTTG-------------GAAGATGATTTTTG-TCAACCA----GTATTTCCCACCAAACTTTGACTTTTTAAG s rn2.chr12 35070220 279 - 46874691 CTGGTGCTAGCGATCAG-----ATTGGAGACAAAACGATGATTAAACTCTGAAAGCCAGTACAGAAAGAAACTTTCCC----TGCTGAGTGTGGTAGTGAGGTAGGACCGTCATTTGGAGGCTGAGAATGAGCTCCTGTCTCAAACAT----AAACTTTGAGGACTTTCATCAGAGCAGT-TTAGGCAGCTTGGATTTGGGTTCAGGGTTCAAAAGCGACTCTG-----AGAATAGTTACACAGTTG-------------GGAGATGAGTTTTG-TCAACCA----GTATTTCCCACCAAACTTTGACTTTTTAAG a score=623.000000 s hg15.chr7_random 1029808 36 + 1057565 TCCTT----------------------------------------------------------------------------------------------ACTGGGTATGTTAAAATTATTTCTTTCAAAA s mm3.chr5 141584949 36 + 149719773 TTCTT----------------------------------------------------------------------------------------------AATGACTATGTTAAAAGTATTTCTTTTGAaa s rn2.chr12 35072085 130 - 46874691 ttcttttttttttttttcttcttcttcttcttcttcttttttctttttttcggagctggggaccgaatccagggccttgcgcttgccaagcCCATTCTTAATGACTATGTTTAAAGTATTCCTTTTGAaa a score=7741.000000 s hg15.chr7_random 1029949 93 + 1057565 TGGACAAAAAAAAAAAGA---GGAAAGAAAAAGCTAAACTATTTAATCTGGGCTAGTAAATGGCCAGAAAGGGCCTTATAAAAATGAAATATACAA s mm3.chr5 141584985 84 + 149719773 tagtaataataacaatga---tgataataataaACCAACTATTTAATCTGATCTTACA---------AGGAGGACTTTCGAAAATAAAGCATTCAg s rn2.chr12 35072215 86 - 46874691 tagtaataataacaataacaatgatgataataaACCAACTATCTAATCTGAGCTTGCA---------AGGAGGACTTG-AAAAATAAAAGATGCAg a score=1650.000000 s hg15.chr7_random 1030042 98 + 1057565 -----AATGATACTTGTAAGTTTAACGAAAGGGATAGTTATGACTCTTCAATTTG---CATATGTTATAAATAATATCAATGTAAAAGCTTATAGCATGGGTCCAt s mm3.chr5 141585186 85 + 149719773 ATTAGAATGACGGTAGTACCTTT-AGTAAGAGTGTAGGCATGTCTGCTAAGTTTGCATTCTATGTTACAGATATTGTCAGCATGTT-------------------- s rn2.chr12 35072391 77 - 46874691 CTCAGAATGACAGCAGCA-------GTAAAAGTATAGGCATGGCTGCTAGGCTTG---------TTTCAGATATTGTCAGCCTAAAACCTTTC------------- a score=90130.000000 s hg15.chr7_random 1030250 634 + 1057565 AGCATGGGTCCatttttaataaatacataaatatttaaaCTTTCTAGATCTAAAGCTTAGGGACTATGGAGTGGATCTCATTGAAGTTTCAGACAATGGATGTGGGGTAAAAAAAAAAAACTTTGAAGGCTTAAGTAAGTTGACTTTGTCTAATCCTATTATAAAATAATTG-GGCCACATGTCTCAGGATTTTGAGTAACACTGTCTTGGGAAACGCAAAAACAGTTTTTTAAGCCAGTTACTAGATATCATGTATATCTGTTGTTTTAGCACTTGAGGTATCTTATTCCTTACTTTACAGTCTCTTTCAGCTCTGAAACATCACACATGTAAGATTCAAGAGTTTGCCGACCTAACTGAGGTTGAAACTTTCGGCTTTCAGGGGGAAGCTCTGAGCTCACTGTGTGCACTGAGGTGATACAATGTTTTTATCCATTCACTTGACCCCT-TAGAAACACCT-----CTCAGAAAGTTAATTGGAATTGTTATTATTTACAATTTTCTATCTCGGTATCTCAGCTTCTAGCTTCTGAATTCTGTTTTGTCTCACTGCCAATCTAAGTCCTAGTACTTCTGAAATGTGGGAAATAAATGAATGAAATGAAGCAAATAGTATTGTTAAAAAAAAATGGTTACC s mm3.chr5 141585271 576 + 149719773 ACCATGGCTTAATCATTAAGAAATAAATATA---TTGAATTTTTTAGATCTAAGGCTTAAAGACTATGGGGTGGACCTCATTGAAGTTTCAGACAATGGATGTGGGGTAGAAGAAGAAAACTTTGAAGGTCTAGGTAAGATAAATGTTCCTAATCG-----TAAAGTAGTCATTTCCACGTGTCTCAGATGTTTGAGTAACACTGTCTTACACCACGTA-----------------CTGTGA-TAGA---------------------TATCACTGAAGACATTTTGGGC----CTTTCTACTCTCTTTCAGCTCTGAAACATCACACATCTAAGATTCAAGAGTTTGCCGACCTCACGCAGGTTGAAACTTTTGGCTTTCGGGGGGAAGCTCTGAGCTCTCTGTGTGCACTAAGGTGATGCATTATTCTCA-----TTGGCTGCCACATGTAACAACTCCTGCAGATCGAGAAGCATGATGAGAGCCCTCGTGGTTTATGCTTTACTACTGAAGTATCTTGACTCCGAGCTTT--AATTCTCTTTTATCTCATTGCCAACCTAAG----GAGATTACTGAAATGTGAGAAATAGAGGAATGGAATGAAGCAAATCATGTTGT---ACAAAAGTCACCGCC s rn2.chr12 35072468 602 - 46874691 ACCATGGCTTAATCATTAAGAAAGAAATCTA---TTGAATTTTTTAGATCTAAGGCTTAAAGACTATGGAGTGGACCTCATTGAAGTTTCAGACAATGGATGTGGGGTAGAAGAAGAAAACTTTGAAGGTCTAGGTAAGATAAATGTTCCGAATCC-----TAAAGCAATCGTTTCCGCGTGTCTCGGATGTCTGAGTAACACTGTCTTACACCACACG-----------------CTGTGA-TAGATGTTGTATGTGTCTGTCGCTCTATCACTGAAGACATTTTGGGCTTTTCTTTCCACTCTCTTTCAGCTCTGAAACATCACACCTCTAAGATTCGAGAGTTTGCCGACCTCACGCAGGTTGAAACTTTCGGCTTTCGGGGGGAAGCTCTGAGCTCTCTGTGTGCACTGAGGT-----ATTGTTCGCAG-CAGTCAGACGCCATCTGTAACAACTTCTGCAGACTGAGAAGCAGGATGAGAAGCCTTATGGTTTCTACTTCACTCTCGAAGTGTCTCGACTCCTAACTTCTGAGTTCTCTTGTATCTGATTGCCGATCTAAG----CAAATTACTGAAGTGTGACAAATAAAGGAGTGAAGTGAAGCAAATCATATTGT---AGAAAAGCCATCGCC a score=2421.000000 s hg15.chr7_random 1030884 20 + 1057565 CTTATTAGAACA----GTAACTTC s mm3.chr5 141585847 24 + 149719773 TGTCTCAAAGCACTTCGTAACCTT s rn2.chr12 35073175 24 - 46874691 TGTCTTAAAGCACTTAGTAACCTT a score=12752.000000 s hg15.chr7_random 1030904 156 + 1057565 TCAATTTTAACATAACATATAGGTAATAAATGATAGTTACCATTACTTTTCAT-CATCAAATTTTAGGGAAACATTTCACCAAAGCACTATTTAATTATAGCACAGATACTAAATTTTTATAATtatatttaaatatatatatacatatatatgtgt s mm3.chr5 141585957 117 + 149719773 GTAACGATAAAGTAATACATACATGATACATTGTGAGTACCATTAGTTTCAGTCCTTCAGTTTTTAGGGAAAGATTTAATGAAAGCCCTATTT---------------------------TAATTATGATGAAGC-------------TATATGTTT s rn2.chr12 35073290 116 - 46874691 -taaAGATAAAGTAATACATACATGATAAATTACGCGTACCATTAGTTTCAGTTCTTCAGTCTTTAGGAAAAGATTTAATGAAAGCCCTATTT---------------------------TAATTACAATGAAGC-------------TATGCATTT a score=23472.000000 s hg15.chr7_random 1031521 380 + 1057565 TATACATTTTAATTATAATATCTTTTGGATTCtttaaaaattttaaaaaattttttaattctttaaaaaattctttaaaacaattttatttGAAGAGTAATAACAAAAC----AAATCTCTATTTGTGAATAAATAAACCTTGAGATCATTTATGGTTTTGCAATTCAACCTGAAAAA--TGAAATCAAAGCTTTTATCAAAACAAA-----GCATGTTTAGTGCTCTCTGTCTCACTGTCTTTTAGATGCCAAACCTTAGATTTTATGATGACTCCTCAACC-GTTTAGATCTTGGTTATCTCAGAGGGATCATCAGCTTTTTAAGAAAGTTTTGAGAGAAAAGCAAGTGAAGAAAAGCGTAGTCAATGCTCAACATCACGGGTCTCTCAC s mm3.chr5 141586074 290 + 149719773 TATATTTTTGAATTA---TGTCTTT------------------------------------------GAAGTCTTTGTACCAGTTCCAT--------TAGTAACAAAACTGAGAAATAAAGCTTTGAG----AATAGAATTTGGGATGCTTTGTTGTTTTGCAACTCAACCTAAAAAAAATGAAATC------TTTAAAAAAAAAAACAAA-GCATTTATAAAA----CTGTCTCACCATCTTTTAGGGGTTAAACT-----TATTATGGTGATTCCTTACTCAGTGCAAACTTTAATTGTCCGAGAA----TATCACCATTTCAAGAAAGCTTTGAGAGAAGGGAAAGTGGGAAAA-------------------------GGTTTCCTAt s rn2.chr12 35073406 271 - 46874691 TATATTTCTGAATTAC--TGTCATT------------------------------------------GAAGTCTTTGTAACAGTTCCAT--------TAGTAACAAAACTGAGGAG----GCTTTGAG----AATAGAATTTGAGATCCTTTGCTGTTTTGCAATTCAACCTAAAAAA--TGAAATC------TTTAAAAAAAAAAAAAAAAGCATTTATAAAA----CTGTCTCACCAAACTTGAGGTGTTACA-----------------ATTCCTTACTCAGTTAAAACCTTAATTGCCTGAGAAGAA-TATCGCCATTTGAAG------TTCTGAGAAAGGAAATCGGGAAAA-------------------------GGTTTTCTGt a score=44195.000000 s hg15.chr7_random 1031901 275 + 1057565 TGAA--------------CACACCACGCCTGGTATTCTCTCACAGCGATGTCACCATTTCTACCTGCCACGCATCGGCGAAGGTT-GGACTCGACTGGTGTTTGATCACTATGGGAAAATCATCCAGAAAACCCCCTACCCCCACCCCAGAGGGATGACAGTCAGCGTGAAGCAGTTATTTTCTACACTACCTGTGCGCCATAAGGAATTTCAAAGGAATATTAAGAAGGTACAGTAAATTAATCCTGGTTTTCAAGAGTATTGGTTAAT---GCACATGA-GCAAAAGATTTA s mm3.chr5 141586490 289 + 149719773 TAAAGCACCCCTAACG--CCTGCTGTCCCTGACACTCTCTTACAGTGATGTCACTATATCTACCTGCCACGGGTCTGCAAGCGTTGGGACTCGACTGGTGTTTGACCATAATGGGAAAATCACCCAGAAAACTCCCTACCCCCGACCTAAAGGAACCACAGTCAGTGTGCAGCACTTATTTTATACACTACCCGTGCGTTACAAAGAGTTTCAGAGGAACATTAAAAAGGTAAATTCA--CCATCCCAGCCTTCACAAGT-TTTGCTAATGTAGCTTATGATTTAAAAAATTGT s rn2.chr12 35073800 282 - 46874691 TTCTGTATCTCTAATGGACATGTTGTCCCTGCCACTCTCTCACAGTGATGTCACTATATCTACCTGCCATGTGTCTGCAAGCATTGGGACTCGACTGGTGTTGGACCATAATGGGAAAATCATCCAGAAAACTCCCTGCCCACGGCCTAAAGGAACCACAGTCAGCGTGCAGAACTTATTTTACACCCTACCCGTACGTCACAAAGAGTTTCAAAGGAACATTAAAAAGGTAAATTCA--CCATCCCAGTC----------TTTGCTAATGTAGCATATGatttaaaaaattat a score=19010.000000 s hg15.chr7_random 1038827 157 + 1057565 TCCTCCTTTAGAACACACATTCTCTTTAAAGTAATATACAAACATGCCAAAACAAGGTAAAAAATTACATCTGAATTCTCACATTTCA-AACATATATGAAATATCAAATAA--AAATTTATTTTTACAAGAATTTAGGGGAACTACTACATAGCTATAA s mm3.chr5 140890325 158 + 149719773 TTCTCTTTT-AAACACAAGCCCTCTTGAAAGTAATATGCAAACATGTTCAAGTGGTTGAAAGTACCACAGCTCAATAGTCACATTCAATAATGGAGAGGAAATATCAAAGAAATAAAAACATATTCATAATGATCTAAGGTTA-TATTACCTAGATGTAA s rn2.chr12 34412555 158 - 46874691 TTCTCTTTC-GAACACAAACCCCCTTAAAAGTAATACACAGACATGACCAAGTGGTTTAGAGTACCTCAGCTCAATATTCATATTCAACAATGGAGATTAAATATCAAATAGATAAAAACATGCTCCTAAGGATCTAGGGTTA-TATCACCTAGATATAA a score=52864.000000 s hg15.chr7_random 1039635 637 + 1057565 TATGTATATATAACAACTATAACTCTCATCAAAAAACTACAGGAACAGCATGTTTTCAAAAGTACAACAATTTCCAAA-CTATTTGAAATAAATCTATGAATAATTCAATGGCCGACATTTTCCAAACAAACCAATAAAA--TGCAGAGTGTGCATGAAGCTATCTGTTACAATC-TGTGGCACTGATATTTCAC----AAAAGAATTCTGTCCCAATCTGAGCCCCTGCATTGTGCCTTCAAATCCTCC------TGGACTGCAAGTCCGTAAGAAACAGGACCTCCAGGTTCCGCCCCAGGG-AGGTTGGAATTCAG--CAATATAAAAAGGGT---GGTGGTGCCGCAGGAAAGGGTGGAACTGGAAACGCTCCTGGTTTCTTAC-TTTTCTCCAAGGACTCCTAGAAGGACCCCACCCCCCTCCCCCCACCCCTGCTCCTAGGAGGACAACGTGATCACTGTATTCAGCTCCATCAAGAATGGTCCAGGTTCTTCTAGATGATCTGCACAA-ATGGTT-----CCTCTCCTCCTGCCTGGTGTCTGCCATTAGCATTGGAATAAAGTTCCTGCTGAAAATCCACATCTCCCC------TGGGTCCGGTGTTCTGGAGGC--GAGAGAGACAATGTCACACTTCAAGGAGGCAGCTCTCTAGACAGGAA s mm3.chr5 8841136 605 - 149719773 TATTTACATATATGAATGTTATC---CATCACAAAATCAGGAGAGCTGCCTGTTTTCAAATCCACAAT-ATTTCAAAC-CTGTTCATAATAAA--------TAATTCTATGAGAAAC---TTTCAAAGTCTTCAATAAA---CATGAAATATAT-TAAAGCTTTCTATTACAAACATATGGCTCAAAGGCTATACTTTGAAGGTAGTTCCCTCCACATCTGAGCCCTGAGGTGCCTCCTTCAAATGGCCTGAGCAGTGGAGACCAATTACAGGAAACCATGGGCCTTCAGCTGCTACGGTTGGG-AGGTGGGGACCGAGGACATTCGGGATAACATTTAGATGGTGCCTCTGGAAAGCATGGAGCCTGGAGGAATCCTGGTTTCTCATGGCCTCTCCAGAGACTCCTACAAGGGTCCCA-------------------GCTCCCAGGAGCGCAGTGTGGTGATTCCATCCCACTCCTTCTGGAAGAGTCTGGGTTCTTCTAGGTTTCCCATGGAAGATAGTCAGTCCTCTCTCCTTTCCCCCAGCAG----TCCTAATGTTGGCATAGAG-----------------CATCTCCCT------CAGGCACAGGGATCTGGAAGGAAGAGGGCAGCCATGTCAGACTTTGTACATGTGATTCTCTAAGCAGGAA s rn2.chr12 12473816 586 + 46874691 TGTTTACATA----AATGTTATC---CACTACAAAACTGTGAGAACTGTGTGCTTTCAAATCTACAAT-GTTTCAAAAACCGTTCATAAAAAA-------ATATTTCTATGATAAAC---CTTCGTAGACTCTAATAAAATTTGTGAAATATAT-TAAAGCTTTCTATTACAAACATATGGCTCAAATGCTGTATTTTGAAGGTAGTTCCCTCCACCGCTAAGCCCTGAGGGGCTGCCTTCAAAGGGCCTAAGCAGTGGAGACCAATTACAGGAAACCACAGGCCTTCTGCTGCTACGGTTGGGGAGGTGGGGACTGAGGACATTCGGGATAACATTTAGATGGTGCCTCTAGAAAGAATGGAGCTTGGAGGAATCCTGACTTCTTATGGCCCCTCCAGAACCCACTACAAGTGTCCCA-------------------GCTCCCAGCAGCACAATGTGGTGACTCCATCCCACTCATTTTAGAAGAGTCTGGGTTCTTCTAGGTTTCCCACAGAAGGTAGTC------------------------------CTTAATGCTGGCATAGAG-----------------TGTCTCCCTTAGGCACAGGCACAGGGATCTGGAAGT-AGAGGGAAGCCATGTCAGACTTTATACATGCAAATCTCTAAGTGGAAA a score=5222.000000 s hg15.chr7_random 1040272 51 + 1057565 AGTTATTCACGTC------CCATGTCAATTGAGAAATGCAATTTTATCT---------GCTGCCTT s mm3.chr5 140891216 66 + 149719773 AGTTAGTCCTAACTAGAGGCTGGAACACTTGGCAAGTGTGACCTTATCTCTAATCCTCGCTTCTTT s rn2.chr12 34413414 66 - 46874691 AGTCAGTCCTGACTAGAGGTCAGAGCACTTGGCAAGTGTGAACTTATCTCTAATCCTTCTTTCTTT a score=28855.000000 s hg15.chr7_random 1040325 431 + 1057565 ATTCTAT-ACCCTGCTTCTGAACCATCGTGTTCAACTGTGAAACTCACACTTTGGTGACCACGACTCCAAAACTCACTTAATACACCCAAGGTCAGCCCCAGTGA---TCTGCTTCATACCAAGGACTTTGGGTGGGTCTGCCCAGGGAGTAGGGCACCCTCAGAGAATGTGGCTTTGGACTTTATCACAGCTGGGGCCTTTTGTGTCACTTAAGATCTAAACTTGTAACCATGCTAGATGTGTTTCTAATGTGACAACATCACGAACCACGAGTCCAGAAGCCTAATCCTTAATCCTACCTCCTCATGATGAAGTCTC------ATGCTCTGTGCTCAACGTGGTTAGCTGCACAAGATGTAAACCAAAGCTTCACTGAACCCTCGACCCAAATCAGTAACTCAAGTGCGTCAATCATAATGAACCT--CCCCAAA----------------------------------------------------------------------------CTCAGt s mm3.chr5 140891554 406 + 149719773 ATCCTTG-ATCTGACCCCTGAAGCGTCATGTTCAGCTGTGATTCTCAACCTTTGGTAACCTTGGCTCTCGTAGTCACCCGATCTGCCCAAGGACAGGCTCAGAAGCATCCTGCTTTACAACAGTCACCCGAGGT--------------------TCACGTTC--AGAACGTGGCTTTGAACAAATTCATATCTTGCTCCTCACCAGTTGCTGAAAATCTCAACAGCTAACCATGCTGTAAACATCACTACTGTGTTAGCATCTTGCCCCATGAGCCTCTGC-TCCATTGCTCACCCTAACCAC-------TGAAGTGACACTGTAATCCCTTAGGTGGAGCTTGGCTGTTAACATGGGACGAGAACCAAGTATTTGTTTCATCGTCTCCTCAAATCTGTAAGTCTAGCT------TCGGACTGAAAGTAGCCCCTGA----------------------------------------------------------------------------GGCTGG s rn2.chr12 34414045 482 - 46874691 TTTTTTTTATCTCAACCCTCAAGCATCATGTTCAACTGTGATTCTCAACCTTTGGTAAGCTTGACTCTCAGAGTCACCTGACCTGCCTAAGGTCAGGCCCAGCAGCACCCTGCTTTACCACAGGCACCCGAGAT--------------------TCACTTTC--AGAATGTGGCTTGGAACAAATTCACATCTCGCTCCTCACCACTTGCTTCGGATCGGAACTTCTAACCATGCTGTACACATCAGTACCGTATTAGCATCCTGATCC--GAGTCTCTGTGTGTACTGCTCACCTTAACCTC-------TGAAGTAACGCTGAGATCCCTTATCTGGGACTCGGCAACTAACGTGGGATGAAAACCAAGTATTGGTTTCATCTTCTGTCCAAATCTGTCAGTCTAGTT------GCAGATTGAAATTAGCCCCTGGAGGGGTTGGggatttgggttcggtccccagctccgaaaaaaagaatagaaaaaaaaaaaaagaaatTAGCCCCTGGGGCTGG a score=50021.000000 s hg15.chr7_random 1040967 724 + 1057565 TGA----AGCCAGAT-----------------CAAG----CAATTGGGTT----------------------CTTC--------------GGATTTCCGAAATAGA--------CCCCAATA--------------------------------------------------------------TTCTGCCT-----------------------------------------------------------------------------------------------TTACCCCAGAGGATG--------------------------------------CA--------------------------------------------------------GATGTACCTTCTCTCAGGCCGATGACCTCAGGCCTCCCCGGTCCCTGGAGCTCTAGGAAAGGTGAGCGCGATCTCGCGCCCACACCCAGTGCTCTGGGTCATAAGCCTGGATCTGGAAAAACAAA--C-GCCCTTTGAG-AAGACGGGGACTCGCC---AGGATACCCCTCTCTCCCCTCATCCAGCCTCCAGCCCACCCAATTCCTCCCCACCTCCTCCACCTCCCCAGGCC--CCACTCACCTCCTCCAACTCCTCTGGGGAAACCCAAGCCCTGCAGCTCATGGAACAGAAGAAGTGGAACCGTCGTTTCTGGAACAGGACTATCTGAGAGCGGTTCTTCCTGGCCCTCGAGTTCATGGAACGGTATAACTGGAACCGACGCTTACAGAGCAAGGGTATGCGAGAGCGGTTCTTCCTGGCCCTCGGGTTCGTGGAACGGTATAACTGGAACCGACGCTTACGGAGCAAGGGTATGCGAGAGCGGTTCTTCCTGGCCCTCGGGTTCATGGAATGGCCTAACTGGAACCAACGCTTACGGAGCAAGGGTATGCGAGAGCGGTTCTTCCTATACAGGAAGTGGAAGATGTTTTGTTTGGAGTCCTCGTCGTCCTCCTCCATGTCATTGGCCAGGTAGCTGAGGACAGAAATCAGG s mm3.chr5 140891960 808 + 149719773 TGACATGAGCCTGGTAGCCTGCTTGGGG-TGGAAAGATGTCAACTGGGTTTCAGTCCTTGTAACAGTGCCCACTTCTGAGCTCATCTGAGTGGCCTCTATCACATAGCCAATCTCCCCAAGA--------------------------------------------------------------TCCTGTCT-----TCAACCATACTCtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgATGGGGTTAATACAGCGATGCCAATGGCTGGGCTGTTTCAAAGGTTGAAGGTGAGTGAGGGATGACAGTGGTTTAAGT-------CATTAATATGACTTTCATATTTAGACCACAGACAGGGGTCTACACCTCACAGAACAGCAACATACTTTC-CTCAGGCCGATGATCTCAGGCCTCCATAGT-CTTAGGGTTCTAGGTCAGGTTGGTGCGATCTCGTGCCCACACCCAAAGGTCTGGATTGTAAGCCTGGATCTGGAGAAAGAAAAACAGCTCCCTGAACAACGCGCGGCTTCACCCCAGGGACACCCTGTGTTCTCCCTGTTCAGCCTCACG--------------------CTTTTCCATTCCCCAAATCCTGCCTCCCACCTTT-----------------AACCCCATTCCT-----------------------------------------------CTCTCTG---TCTGCCCAGCCTGTCCCT---------------------CCGCACCCCACACTCCCC---------------------CTCCCTCT--CCCCCC---------------CACACCTCTTCACACTCCTCCCGGGACA---------------------CCCAGATCTTCCAGCCCATGGACCGAATGAACTGAAAGCGCAGTTTGTGGAACATGGGGCGCTGGGCATAGCTCTTCCCATAGAGGAAGTAAAAAATGTCTTGCTTAGGGGCCTGGTTGTCCTCCTCCATGTCATTGGCCAGGTAGCTGTGGA-AGGAATCAGG s rn2.chr12 34414527 860 - 46874691 TGAAACGAGCCTGGTGGCTTGCGTGGGGGTGGAAAGATGTCTACTCGGTCCCAGTCCTTGTAACAGTGCCCACTTCTGAGCTCGTCTG--TGACTTCTATCACATAGTCCATCTCCCCAAGATCCTGTCTTTCTTTGctctctctctctctctctctctctctctctctctctctctctctctctcctctctctctctctctctctctctctctctctctctctctctctctctctctctGTGTGTGTGTGTGTGATGGGATCAATACAGCAATGCTAATGGCTGGGCTATT---AAGTATGGAGGTGAGTGAGGGATGAGGGTGGTTCAGGTGGGGGCTCA-----GTGACCTTCCTAATTAGACCACAGACAGGAGTCCACACCACAGAGAACAGCGACATACCTTC-CTCAGGCCGATGACCTCAGGCCTCCACAGT-TTTAGGGTTCTAGGTCAGGTTGGTGCGATCTCGTGCCCACACCCAGAGATCTGGATTGTAAGCCTGGATCTGGAGAGAGAGA--CAGCTCCCTGAGCAATGCCTGGCTCCACCCCAGGGGCACCCTGTACTCTCCCTGTTTAGCCTCAAG---------------------GTTTCCATTCCCCCA------CCTCCCATATTC-----------------AACCCCATTCCT-----------------------------------------------CTCTCTG---TCTGCCCAGGCTGGCCCT---------------------CTGCACCCCATGCT--------------------------TCCCTCAAACCCCTC---------------CACACCTCTTCACACTCCTCCCGGGACA---------------------CCCAGATCCTCCAGCCCATGGAGCGAATGAACTGGAAGCGCAGTTTGTGGAACATCGGGCGCTGGGCGTAGCTCTTCCCGTAGAGGAAGTAAAAGATGTCTTGTTTAGGGGCCTGGTTGTCCTCCTCCATGTCATTGGCCAGGTACCTGCAGA-A-AAATCAGG a score=16558.000000 s hg15.chr7_random 1042662 184 + 1057565 TGAACTG-----------ATTTCAAGGAATGGGTCCTTCCCTTCAGAGCCACATGTGTGTGGGACACCCAGACAGAAAACACAAA-------------------------------CACAAAGTCGAGTGGAGGGCATTTGGAAGGAGCAGTGAAGCCGAGCCAGGAAATACCAAGAT----GGCGAGCCAGTGTGCTTGTAGAGATTGTAGA--GAGGGTAGAATTGACAC s mm3.chr5 8844770 182 - 149719773 TGGGCTG-----------ACTTTTAGGGG-AGATGACTGTCTTTAGGCACACAAGTG-GTAAGACACTTGCACAGAAAACACAA--------------------------------GATAAAATCAAGGACAGGGCATTGGGAAGGAGCCAGGAAG-GAAGGGAGAGAGTGTCAGGGCATTAGGTGAACCAGG----CTGGAGAACACCAGGACCGAGGGTAGAGTTCACAC s rn2.chr12 12478602 223 + 46874691 TGGGCTGGGCTCAGGCTGACTTTTAGGG--AGGTGGCTGTCTTCAGGCACACACGTG--TGAGACACTTGCACAAAacacacacacacacacacacacacacacacacacacacacGATAAAATGGAAGACAGGGCATTGGGAAGGAGCCAGGAAG-GAAGGGAGAGAGTGTCCAGGCATTAGGTGAGCCAGG----TTGGAGAACACCTAGACAGAAGGCAGAGTTCACAC a score=3229.000000 s hg15.chr7_random 1043599 34 + 1057565 TTTTGTACACAGAGTAAAGAGGACAAATAGGTGA s mm3.chr5 8849356 34 - 149719773 TTTTCCTCATAAAGCCACAAAACCGTGTGGATGA s rn2.chr12 12482187 34 + 46874691 TTTTCCTCATACGGCCACAAAACCATGTAGACAA a score=73300.000000 s hg15.chr7_random 1043633 628 + 1057565 AAGAATAAATGAAAGGCTGGAATCCCACTTCCCCCGCTGTCCCAGGGCAT-TGGATATTGACGGATAGGAGGCAGC-AAACCACTCACAGAGCCAGGAAGAAATGAATGCGTTGGTATTGCCAGGAGGGGAAGCCGGCCCGGCTGAAATACGCTATGACCATAGCCAGGAGATACTGATGGAGAGAAAGGAACACAGAGAGGGAGAGGTCACATCTTGGAAGAGGAAGATTGTGGAGAGGGGGAATGAGGGTCTGGGGAGGGGCTGCCCATCAGAGAAGGGACCTCAGTGTTGGGGTGACTACTCATTTGGAAATTGCGGGATGGAGGGGTATTCGAAGGT----------CGGATGCAAATCCGAGAAGCCAGAGGAAGGGTTTTGGGTGATGCTCCCAGGATGGTGGGCTCCGATGGGATC--TTTGGAGGGGGTGTGTCTAGGTCGGCTGGTGTCAGGAGGGTCTTTTGTGCGCCAGGCAGAGAACTGTCCCGAAGAGCTGAGAGTAGAGGGGCCAGGAGCTTCAGGGCTGCGGCCAGACTGTGGCCCAGAGCTCAGATCCCAAAGGACCCATAGGAGAGGCAGGGGCCACTCATTCACTCTGCAAGAGACCAGCAGAATCCTGAGGGAGATGCTGACA s mm3.chr5 140894881 592 + 149719773 AAGAATAGGTGAGAGG-------CCCACGTTTT---GTGACCCAACACAC-AGGGCAGTGAGCAATGGGAGGAGGC-AAAATACTCACAGAGCCAGGAAGAAGTGGATGGGCCTGTACTGCCAGGAGAAGAGCCCAGCGCGGCTGAAATAAGCTATGACCATAGACAGGAGGTACTGATGGAGAGA---GGAGACAAGAGAGGAGCGGTCACACCCTGG-AGACGAGGAATGTGGGGACAGAGGAAGGGTGGCTGAGGCAGACCTGAGGTTCAGAGA--GGAGCCTAGAGTTTGGGTGCCTGC-AGTGTGGGCAGGGGAGGGTGGAAGGGCACGAGCAGGTGCCCTTGTTGCTGCTGCATGGCTGCATGGCTCCCTGCAG---CCTGTATG--------AGCATGGCTGGCTCT----GGGTCAGTTCTGA--GGGAGGGTTTAGGCCAGCAGGGACAAGGAGGAGCTTGTCCAGCTGGAGCAAAGGA----GCCAGAGAGCTGTGGGGAGAGAAG--AAGCAATTC----CCAAGGTAAGATGGTGGTCTTGGGCTCAGATCTCAAGGATTCCA---GTGAGGCAGGAGCC-CCTGTCCACTCTGTAAGATGCTGCAAGTCCTTGCAGAGAGACACTGGCA s rn2.chr12 34416266 598 - 46874691 AAGGATAGGCTAGAGG-------TCCACGTTTT---GTGACCCCAACCACCAGGGCAGTGAGCAATGGGAGGAGACGAAAATACTCACAGAGCCAGGAAGAAGTGGATTGGCCTATACTGCCAGGAGAAAAGCCCAGCGCGGCTGAAATAAGCTATGACCATAGACAGGAGATACTGATGGAGAGA---GGAGACAAGAGAGGAGCGGTCACACCCTGG-AGAGGAGGAAGGTAGGGAGAGAGGAAGGGTGGTGGAGGTGGGCATGAGGTTCAGAGA--GGAGCCTGGAGTTTTGGTTCCTGC-AGTGTGGGCAAGGGAGGGTGAGAGGGCACAAGCAGGTGCCCTTGCTGCTCCTGCATGGCTGCATGGCTTGCTGCAG---CCTGTATG--------AGGATGGCTGGCTCT----GGGTCAGTTCTGAGGGGGGGGGGTTAGGCCATCAGGGACAAGGAGGAGCTTGTCCAGCTGAAGCTAAGGAC---CCCAGAGAGTTGTGGGGAGAGAGG--AAGCAATTC----CCAGGGTAGGATGGTGGCCTTGGGCTCAGATCCCAAGGACCCCA---GTGAAGCAGGAGCCTCCTGTCCACTCTGGAAGACGCTGCCAGTCCTCGCAGAGAGACACTGACA a score=4041.000000 s hg15.chr7_random 1044581 25 + 1057565 GGGTGCCAAGACCCAAGACCATGGG s mm3.chr5 8849989 25 - 149719773 GGAGATCAAGGGCCAGGACCGTGGG s rn2.chr12 12482828 25 + 46874691 GGATATCAAGGGCCAGGCCCGTGTG a score=30656.000000 s hg15.chr7_random 1044933 268 + 1057565 GAAGCATCTGGTGGGAGGTGGTGGAGGGAGAACTGTGGGTTTGGAAGCTGCGCCCTCCCCCCAGCCATGCGTTGGAACAGGAA--CAGTTACATGGAGAACAACCTTACCTTGTCCGACACCCTCAGATCTTTGTCCCAGGCCAGGAATCTTTTAATGACAGGATCCTCTGTGATTAGAGAGCAGATGTCAGTGTGAGAAGCAGGACAGGGTTTCCGTGGGAGCAGCAGGGCAGCGAGGAGAAGTGTGCCTCCCGGGGGGAAGTCTCAGG s mm3.chr5 140895507 240 + 149719773 GAAACCTCTGAGGGGC----------AGAGGAGTGTGGGTCAG-----CGGGGTCCCTCCCCATGCA-GAACAGGAGCAGGAGGCCAGCTCAGAACAGGAC-TCCTCACCTTGTCTGACACCCTCAGCATCTTGTCCCAGGTCAGGAATTTTTTCACCACAGGATCCTCTGTGAAGGAAGCACACTTGTTATAGTGTGAACAGGAAGAG------GCTGGGAGC-----TGGAGCCAGGAGAA--CCACCTCCCTGGGGGAGGGTTCAGG s rn2.chr12 34416898 240 - 46874691 GGAACCACTGAAGGAC----------AGAGGAGTGTGGGTCAG-----TGAGGTCTCTCCCCAGGCA-GGACAGGAGCAGGGGGCCAGCTCAGCGCAGGAC-TCCTCACCTTGTCTGACACCCTCAGCATCTTGTCCCAGTTCAGGAATTTTTTCACCACGGGATCCTCTGTGAAGGAAGCGCACTTGTTATAGTGTGAACCGGGAcag------cttgggagc-----tgccgctgggagaa--ccagctccgtgggagaaggttcagg a score=53591.000000 s hg15.chr7_random 1045918 662 + 1057565 CAAGCTTTCTTATCCCAAGCGCTGACCTTTTTCAAGTTGACC-TAATCCTTTATCATCTCCTAAGTGTCCCTCATGAGTGATC-ACTTCACATTCCTCCCAC--ATGGAGAGCTCACCAACGGGGGCCTATTTTTCCCATGGGAAAAGTGTGGTTATTGGAAGTTTCCT-GTTTTTGGAAAGAACAGGATTGGAGGTGCTCTCTGGGGTGTCCTCCGACCAAGCAGCCTGTTGAAGGCCTCGTGGTGCTCAGGGAGCACGAGCGACACTCGCCGTCGCTTCAGCTTCATCTTGAGGCCACACAGCATCTCCGCCACCCAGATCTCCTCAGGCTCAGGGGCGAGCACCTTCCGTGGCTCCTCCTCCAACGACTCCTCAGATTGGTCCCACCACTCCATCTTCCTTTTCCAGCAAAAGGACCTATGCGGGGGGCTGGGATTTACCCCAGGGGCTGAGTAAAGAAACCAGGCCACGGTGTAATGCTTCTGCA--GTTGATCACACTAGAGCCCGACCCAAAACCCCAAACCACTCTCCATCCT-CCCCAGCCTCGCAGACTGCTGGC-TTCTCCAAGCCATCTTTCCTTCTGTCTGTCTCCTCTGCTGAGCTCCATGTGCCGCTCCTTCTCCTCCCCATTCTCCCGTTTTTCTGT-CCTCAGAACACTTCCTCAT s mm3.chr5 8850580 620 - 149719773 CCAACCTTCTCGTCCTCA-TGTGGATCTGTGCCAATGCTAACCTAAGCCCA---GTTCACATGTGTGACCCTGGGAATCCATTGAGCATAAGTTATTCGGACTGACAGAGTGTGGGGCTGTGAGGGCAGCTTTCCCACA-GGGAAGAGTGTTG--ACTAAAAGGTCCCTCGTTTGCTTAAGGAGCA-------AGCTAAGCTGTGAAGGTGTCTCTTACCGAGCAACTTGGTGAAGACCTTGTGGTGTTCAGGCCTCACTGTAGACACACATTGCCTCTGCAGCGTCATCCTGAGCCCACACGGCGTCTCCACTGACCACACCGGCTGGGGATCAGGTTCAAATAGCTCTGCCAGGTCATCCTC---AGAATCTGATGACTCGTCCC---------TCTTCCTCTTTTGGATGCTGGATGGAGGCTGGGGAGTGGCTTCCACCCTTGGTTCTATGTGAAGAAAGCCCGCC-CAGTGTGAAGCTCAGGCTTTGATGATCTC-----CACTCTGCCC----------ACTGTACTCCAAACA-CCCAAACCTCTTCAGCTGCTGCCTTTCCCCAAACCACTGTGCAGTT------CCCCCCGGGTTGATAGCCAC---CTACTCCCTCACTTTGTCACTGCCCCCCCTCCATGTCCCTCAAGATTCTTCCTCAT s rn2.chr12 34417944 622 - 46874691 CAGAGTTTCTCGTCCTCA-TGTGGATCTACTTCAACTCTAGC-TAAGCCCCC-CGGGCACCTATGTGACCCTGAGAATCGGTTGAACTTAAGTTGTTCAGGCTGATAGAGTGCGGGTCTGTGAGGGCAGATTTTCCACA-GGGAAGAGGGTTG--ACTAAAAGTTCCCTCTTTTGCTTAAAGG----------AGCTA-GCTGTGCCGCTGTCTCTTACCGAGCAGCCTGGTGAAGACCTTGTGGTGTTCAGGACGCACTGTAGACACACGTCGCCTCTTCAGCCTCATCCTGAGCCCGCACAGTGTCTCCACTGACCACACCGGCTGGGGATCCGGTTCCAGTAGCTCTGCCAGGTCATCCTC---AGAATCCGATGACAAGTCCC---------TCTTCCGCTTTGGGCTGCTGGATGGAGGCTGGGACCTGGCTTCCACCCTTGGTTCTATGAGAAGAAAGCCCACC-CAGTGTGAGGCTCAGGCCT-GATGCTCTC-----AACCCTGTCC----------CCAGCACCCCAAACATCCCAAACCTCTTCAGCTGCTTCCTTTCCCCAAACCATCGTGTGGTTT-CCTTCCCCCTGAATGGAAATCCAC---TTGCTCCCTCACTTTGTGCCTGTCCCCTCTCCCTGTCCCTCAAGATTCTTCTTCAT a score=50973.000000 s hg15.chr7_random 1047482 494 + 1057565 AGCGCCAACCTT------------TA--------TCAAGTCTAGCCTAGTCCTCTATCGTCTCCTAAGTGTCCCTCATGAGTGATCACTTCTGAGTCCTCCTGCGTGGAGAGCTCAGCCACTGGGGGCGTATCTTTCCCATTGGAAAAGTGTGGTTATTGGAAGTTTCCTCTTTTTAGAAAGAACAGGATTGGAGGTGCTCTCTGGGGTATCCTCCTACCAAGCTGACTGTTGAAGTCCTTGTGGTGCTCAGGGAGGATGGATGACACTCGCTGTTGCTTCAGCTTCATCTTGAGCCCACACAGCATCTCCACTACCCAGGTCTCCTCAGGCTCAGGGGCGAGCTCCTTCTCCGGCTCCTCCTCAGATTCATCTGACCACTCCCTCTTCCTTTTCCAGCCAAGGGACCTACATGGGGGGCTGGGATCTACCCCAGGGGCTGAGTAAAGAAACCAGGCCACCGTGTAATGCTTCTGCATCTGATCACCTTAGACCCCG--------ACCCAAAAC--CCCAAACC s mm3.chr5 140898247 496 + 149719773 AGCACCAACCTTCTCGTCTCCTTGTG--------TCAACTCTAGCTAAGTCCCT----GGCGCCCGTGTGACCCTAAGAATCGATTAAACATGAGTCACCGAAGCTGACCGAGTGTGGGGCTGTGAGGGCAGCTTTCCCACAGG-GAAGAGTGTTGACTAGAAGGTCCCTCGTTTGCTTAA----------GGAGGGA-GCTGTGTAGGCGTCTCTTACCGAGCAGCTTGGTGAAGACCTTGTGGTGTTCAGGCCTCACTGTAGACACACGTCGCCTCTTCAGCCTCATCCTAAGTCCGCACAGCATCTCCACTGACCACACTGGCTGGGGATCAGGTTCAAATAGCTCTGCCAGGTCATCCTCAGAATCTAATGACTCGTCCCTCTTCCTCTTTTGGATGCTGGATGGAGGCTGGGGAGTGGCTTCCACCCTTGGTTCTATGTGAAGAAAGCCCGCC-CAGTGTGAAGCTCAGGC-TTTGATGATCTCC-ACTCTGCCCACTGTACTCCAAACA-CCCAAACC s rn2.chr12 34417940 507 - 46874691 AGCACAGAGTTTCTCGTCCTCATGTGGATCTACTTCAACTCTAGCTAAGCCCCCCG--GGCACCTATGTGACCCTGAGAATCGGTTGAACTTAAGTTGTTCAGGCTGATAGAGTGCGGGTCTGTGAGGGCAGATTTTCCACAGG-GAAGAGGGTTGACTAAAAGTTCCCTCTTTTGCTTAAA---------GGAGCTA-GCTGTGCCGCTGTCTCTTACCGAGCAGCCTGGTGAAGACCTTGTGGTGTTCAGGACGCACTGTAGACACACGTCGCCTCTTCAGCCTCATCCTGAGCCCGCACAGTGTCTCCACTGACCACACCGGCTGGGGATCCGGTTCCAGTAGCTCTGCCAGGTCATCCTCAGAATCCGATGACAAGTCCCTCTTCCGCTTTGGGCTGCTGGATGGAGGCTGGGACCTGGCTTCCACCCTTGGTTCTATGAGAAGAAAGCCCACC-CAGTGTGAGGCTCAGGC--CTGATGCTCTCA-ACCCTGTCCCCAGCACCCCAAACATCCCAAACC a score=12877.000000 s hg15.chr7_random 1047976 197 + 1057565 ACTCTCCATCCTCCCCAGACTTGCAGACTGCTGGC-TTCTCTAAGCCATCTTTCTGAT---TTTCTCCTCTGCTCAACCCCATGTGCCGCTCCTTCCCCTCCCCATTCTTCTCTCTCTCTGTCCTCCGA-ACACTGCTTCAT--GTCCTTCCCTGGTCCCTGG-----------CTCTCTGAGTCCCTCCTTttttgttttgttttgtt-ttgACa s mm3.chr5 8851078 196 - 149719773 ---CCCAAACCTCTTCAG---------CTGCTGCCTTTCCCCAAACCACTGTGCAGTT-----CCCCCCGGGTTGATAGCCAC---CTACTCCCTCACTTTGTCACTGCCCCCCCTCCATGTCCCTCAAGATTCTTCCTCATTAGAGAGATACTATCCCATAAAAAGGAAGTCTCTTTTTGGGTCTCCTCTTCTCTGTCCTGTCTTTGTCTCTTAG s rn2.chr12 34418438 199 - 46874691 --TCCCAAACCTCTTCAG---------CTGCTTCCTTTCCCCAAACCATCGTGTGGTTTCCTTCCCCCTGAATGGAAATCCAC---TTGCTCCCTCACTTTGTGCCTGTCCCCTCTCCCTGTCCCTCAAGATTCTTCTTCATTAGAGATACACTGTGCCATAGAAAGGAAGTCTCTGTTTGGGTCCCCT--TCTCTGTCCTGCCTTTAT-TCCTCG a score=3350.000000 s hg15.chr7_random 1048451 83 + 1057565 ---TGAATTTCTCCATTCTTCCCACACACCCTC-------------CTCAGGTTCTCCTTCCTG---ACCACTGACCCTTCTTTTCTTTTTT--TTTTTTTTTt s mm3.chr5 8851274 99 - 149719773 TGCCTAACCTCTTTTCTCATTCTACAGAGTCTTAGTCCATGTGACACCTGAGTCTACCACCCTG---tccttccttccttccttccctccct--ccctccttcc s rn2.chr12 34418637 104 - 46874691 TGACTAACACCTTTCCTTGTTTTACAGGGTTTTTGTCCATGTGACACCTGAGTCTGCCGCCCTGATCTCCTTGACTCCAACCCTGCATCCTGGGCCCTCCTTCC a score=82614.000000 s hg15.chr7_random 1048787 639 + 1057565 CCCTTCCTTCGTCTTAGTCAATCCTATCCCACCTCTTCTTCCACCAGTCCCCTCACCTGATGGTCCCAACATTTCATCATCCACCACCTCCTGGAGGGGGTACCCCGAGGTGCTCCGCTGGGGACTCTGCTCATTCTGGGGGTGCGGTTGACGGCTGGTC----GTGATCTTTCCCGTAATCTGT----CCCCTCTTACGGAACCTAGTCTCCGTTCTGTCCATGGCCTTCTTCTGGACACTTCTAGGATCCAGAAGAGTATGTTATCAATTCTCAAGCCTA-GGAGAAGTCAGGAGTAGAGAACAGCTCTGAGAAGATACTGTTGTCCAACTGATCTCCAGGCACCACGGAGTCCGGTCCCTCCAATCAGGAAGGTCGGA-ATCTCTGATGTCATCGTTCATGCCAACCTGGCAACCAGTTTGAAAAAAAACACATGTAACTGCCAGGCTGATCT-----CTTGTCCTGGAGATCCTGGGTGAATGGTATCTCCTGCCACTGTCCCAACCTCAGACCATTGTCCAAAAGCATCTTCAGGGACTCCACATCCCTCTATTCCCTGT-CCCAGCAGAGGCTGTGTCCTCTCCACTCAAAGCCTGAAGCATGTGGGGGTCTCTTCGTCTCTGTACATGCCCATTTCAGAGTCCAGTCT s mm3.chrUn_random 15284101 616 + 117911829 GTCCTCCTCCGTACTGTCT--CCCTCTCCCATCTCTTC-TCCATCTGTCCCCTCACCTGCCAGTCGTGAGCTCTCCCCATCCACCACCACCCCAGGTGAGGGCCTGGTGATGCCAGGCTGAGGGCTCTGTTC---CTCAGAACACAA-TGACAGTTGGCCAGCAGTCACGATTCTCCCAACCTGTATTCTCCCTTCCACAAATCCCAGACTCTGATCTCTCC-CGCCCTCCTCCTGGACTCTGGCTGAATCCA----CGCCTGGCGTCCCTTCCCCCATCTAGGGAGAAGTCAAGAGTGGAGGAAAACTCCAAGAAGATGCTGTTGTCCACCGAGCTGCCTGCCACCATGGAGTGTCTCTCCTCCAATCAGGAGGAGCGGATGCCTATGATGTCATCGGCC-TTCCAATCTGGCAACCAGTTTGAAATAAAACATGTGTAACTGACAGACTGATGTTTCTGCTTGTTCTGAGGATTAGGGGTCA--------CCCTGTC----TCTTACACTCATCCCTTT-TCCAAGACCATTCTC-----CTTGTTTGTTCTCTCTGCAATGTATATA-------CTGTGTTCTCTTCACTTATC-CCTGAAACGTGGTAGATTCTCCTTTCCTCTGTCTACCCCCATTTGCAACCTTAGTCT s rn2.chr12 34418751 623 - 46874691 GCCCTCCTCCCTACCATCT--CCCTCTCACAGCTCTTC-TCGCTCTGTCCCCTCACCTGCCGTTCCTGAGATCTCCCCATCCACCACCACCCCAGGTGAGGGCCTGGTGATGCCAGGCTGAGGACTCTGTTC---CTCAGAACACAA-TGACAGTTGGCCAGCAGTCACGATTCTCCCAACCTGTATTCCCCTTTCCACAAATCCCGGACTCTGATCTATCC-CGCCCTCCTCCTGGACTCTGGCTGAATCCA----CGCCTGGCGTCCCTTCCCCCATCTAGGGAGAAGTCAGGAGTGGAGGAAAACTCCAAGAAGATGCTGTTGTCCACCGAGCTGCCTGCCACCATGGAGTGTGTCTCCTCCAATCAGGAGGAGCGGATGCCTATGATGTCATCAGCC-TTCCAATCTGGCAACCAGTTTGAAATAAAACATGTGTAACTGACAGATTGATGTTTCTGCTTGTTCTGAGGATTAGGGGTCA--------GCCTGTC----TCCTACACCCATTCCGTC-TCCAAGACCAGTCTC-----CTTGTCTGTCCTCTTTGCAATGTATATACTAGGGGCTGCATTCTCCTCACAGATC-CCTGAAACATGATAGAGTCTCCTTCCCTCTGTGTACCCCCATTTGAAACCTCAGTCT a score=7444.000000 s hg15.chr7_random 1052756 76 + 1057565 cttttgtgcctttgatatgt----acctaaatctttt-------aaaaaggtaaatgaactt--cttgccaaccttacaacccaggaat s mm3.chr5 8863824 88 - 149719773 CCCTTGTTCCGTATGTGTGTACAAACCGAAATCTTCTCTCAATACAAAAATTATATGAGCTTG-AATGTCCTCACTGCAAGCAAGGAAT s rn2.chr12 12491860 88 + 46874691 CCCTTGTTCTGTCTGTTTGTACAAACCGAAGTCTTTTCTTAACACAGGAATTAAATGAGCTTGAAATGTCCTCATTGCAAGCAA-GAAT a score=21786.000000 s hg15.chr7_random 1053129 249 + 1057565 acaatccag-gaatttttttcttaagagcctaagagtcttgtctttgaaatgtaaacctggaggaaaatagtgtccctatcttcctgttgcctagggagtttagcctaggcacctt-----gagctgttactacctgcttgtcaaggagatgtgagaagttttattttttcattggatacaggtaattaactagcatggatggccacgttgatttccaggtgaatttaggatgagtgtttaagaatgcatagcag s mm3.chr5 140906241 230 + 149719773 GCAAGCAaggaattccttttctgaaaggcct--gagtcccatctgtgcaatgtaaacctg-gagaaaagagtgttcctatctccctgtcacctggggagtttagcccaggcccctcattcagagacgtaacccc-tgcttgccatgggga-agggaagcttttggtttaa-----gagatagg-----agccagctcaggtgggcacctcagttaccaggtgaGGTGAGAAC----CTGGGAGAAGGTG------ s rn2.chr12 34425383 223 - 46874691 GCAAGCAAG-AATTCCTtttctgaaagacct--gagtnccccctgtggaatgtgaacctttgagaaaagagtcttcctatctgccagtcacc-ggggagTTTAGCCCAGGCCCCTCATTCAGACATTTAACTCTGTGTTTGTCACAGGGATGGGGGAGATTTTGCTTCAT-----GAGATAAG-----AACCAGCTCTGATGGGCA------------GGTGAGTTGAGGACAGACCTGGGAGAAGGTG------ a score=4490.000000 s hg15.chr7_random 1053702 101 + 1057565 -ctgcata---gca----agtccttttgcatgaggatgagttactatttatcttgagagcatgtatgcaatggattgtatctgccaggctatataaaaaggacgctttg s mm3.chr5 8864129 87 - 149719773 -CCCCATG---GCAGTGCAGGCCTTCCG-AGGAGGAGGGCTCACCCTTTCTCCTGAGACCATGTGTGCCCTGCA--GCATCTG---------------AGAGGGATTCG s rn2.chr12 12492158 88 + 46874691 CAGCCAGGCTTGCAGTGCAGTCCTTCCA-AGGTGTC---CTCACCCTTTCTCCTGAGACCATTTGTGCCCAGCA--GCATCTG---------------AGGGGAATTAG a score=7027.000000 s hg15.chr7_random 1054106 139 + 1057565 ggagggtt-tatttctctttgcat-ctcattaatggatcacctgtgatgggcatcacagtctggtttaatgcttattcagtaataaaattgttttctttattttctgaatttgtggagagaatattctaggttAACAGAAT s mm3.chr5 140906558 131 + 149719773 TGATGCTTCTGTCTCCTGCTGGTTGCTCAGCAGTTTATTACCTAGGGTTGGCGCTCCAAGGT-GCTTGGTG---CTTCTGGGAAGAAAACGTTACT------CTCTGCATTGGTGCAGAGAACTTTCTGTTTTGGTAGACT s rn2.chr12 34425694 124 - 46874691 TGACGCTCCTGTCTCCTGCTGCTTGCTCAATAGTT--------------GGCCCTTGAAGGT-GCTTGGTGTTTCTTCTGGGATAAAAATGTTACT--TACTCTCTGCACCAACGCAGAGAACTTACTCTGTTGACAGACT a score=7167.000000 s hg15.chr7_random 1054561 109 + 1057565 TTATTTTTAGTCTTTTCCTTACCAGTTTTTATGAAACAACTGGGCAAGAACACTGTTAGAT---TTCACCAAAAAATTGTGATGA-------------------ATCATTGTCTTTATGAT-CCCATTTTTG s mm3.chr5 8864347 110 - 149719773 TTGTTATTAATTTTGACGCCAAC-GTCTTTATGAAGAACTAGGCCAAGAACGTCGTTGCATTAATTCAATAAGAAAT--CGAGGA-------------------GCCGTTCATCATAATGTAACCATCGTTG s rn2.chr12 12492381 128 + 46874691 TTGTTATTAATTTTGATGTCAAT-GTCTTTATGAAGAATTAGAACAAGAACACTGTTGCATTATTTCTGTAAGAAGT--TGATTATACTGTAGTTCATTATATTGAAGTTCATTATATTGT-ACTATCTTTA a score=2658.000000 s hg15.chr7_random 1054670 12 + 1057565 AAAATTGACATT s mm3.chr5 8864457 12 - 149719773 AAAACTGTCATT s rn2.chr12 12493083 12 + 46874691 aaaaTTGTCATT a score=12111.000000 s hg15.chr7_random 1055903 131 + 1057565 TAACCTAACCCTAAACATAATCCTCCTGGGGAAGGTAAGATCACAGGTATCTCTTCTTCATTCAATTTGTGTGTGTATGTCCTTAT-TTCTCTACAGTTTTT-AGGCATTCACTGTGTGATCTAGAAAAGCTa s mm3.chr5 140907097 124 + 149719773 TTGCCGGACTGCAAACATCAAGTT----GGAGAAGTCATTTGACAAACACGTTTTTT-CTCCC--TTTCTATGTGTGCCTTCTGGT-GCTTTTAGAACTTTT-ATGCATTTGTTGTATGATCTGGCAAAGCCA s rn2.chr12 34426241 127 - 46874691 TCGCCCGACTGCAAACATCGAGTT----TGAGAAGTCATTAGACAAGCACTTTTTTTTCTTCC--TTTCTTTGTGTACCTTCTGGTTGCTTTTAGAATTTTTTATGCATTTGTTGTGTGATCCAGCAAAACCA a score=59048.000000 s hg15.chr7_random 1056309 808 + 1057565 ACAAATTCTATTTTCTTTTTGTTCCTTGGAAAGCATCGCTGGGCATTTATCCTGTCCCAGTATTTGAGTGAAACTTCTCAGCATTTCAGAGCAGTGACCATGATACACCCTTTCCTTTCCTTCTCCTTATGGGAAACTTGGTTCTAACCCAGAGGACTTGGGCTCCAGGACCCAGTAACG-------------CAGCCCTGGACTTGACCCTAAAAGGGAGTAAAGACAAAGGTGAAGTTCAGTCCGGGGTTCAGGGTTGCCAAAGCTCATAGCCTGGAGCTTCTTCACCTTTAGGCGGGGTAGAGACATTTAAAATGGCCCCTAAACTTGGAGGGCGCGTAAAGCTCATAGGCTGGAGCTTCTTAACCTTTAGGCAGGGTAGAGACATTTAAGACGGCCCCTAAACTTGG-GGAGCGCATAGGCTCATGGGAAATAGAGTCCGT-TACTTGTCCTGGGACCGGTGGTGGGTGTCCCGGGAGGCGGACTTCCGGTGCACTCCTGCGCGTGTGCACCTCTCCCTGCGTGCGTGTTCGCGCGTGCGTGCTTGCACATGCGCGCCACCTCCGCACTGCCCTGGCTTCCTGCGCCTCTT-CAGGTCATCGCTTGCTCTCGTTCCCAGGCTTTGGCCTCTAGTGGACGAGAATCACCGAGTCTGCGGGGCTGGACGCTGACTGCCCGGGCCAGCACCTAGGCGGGCGGG---AGCTGTGCGGCCCAGGGTTCACGCGGGCCGGGTAGAGGCTCGAGCCGGGACCCCCGAGCGTGAACCCCGGAGCCGGCGGC--GCTGGGGCCAGAGGG-GCCGGGCGGGAGGTGGTGGCGGAGG s mm3.chr5 8864595 703 - 149719773 ACCATTAGTGTTTGTGCCTCCTTCTTTGTAAAGCACAGCTGGTTATTTCTTGTA-CCTAGTACTTCAAGGAAG-----------TTTGGTTAATCGAGAATGACACTCAGTTTTCTTTCCTTC----TAACACAATCTTCCTCTTATTTTAGGAGTCCTGAG--CCAGGGACAAGACTTGGGACTTCACGCAGCAGGCCGTTTCTCCAGGCTCAAAGGGAGTGAGGACAAACAAGAAGGTAAGAGCATGGCTGGAGGCAGCCATTGCTCTCAG---------------------------------------AGCACCTCCCCCAAACTGCTGGGAGGAGGTAAGTTCTTGCGCGAG---------------------------------------GATCCCTAGATGCAGTGGCGCGCGAAGGCGTCTGGGACACAGAGTTTCTGTGCAATTCTTGGGG--AGAAAGGAGAGCCTTGGAACTCGGACTTCCGGGAAGATGCTGCACATGCGCGTCGCGGCCTGTGCGCGTGCCCGCGCTTGCGC-----------TGGGCCA---CTGCGCCGTGGTGACTTCCTGCAGGTCTGGTGTGTCGAGGCTACCTTCCCTCCCGCAGCCTTTGCGTTCGCTAAGCTGGAGTTGCCGAGCCTGCAGGGCCGAGGCCGGAGCTTCCGGGGCGGCA-----GCGAACAGACTCGGCTGTGCGGGCTAGGG-------AGGCCTAGCGAGAGCTCGGCGCGGAGGCT---GACAGGGGCAGCGGAGACGCCTGCTCGGTGAGGCCCGAGGGCGCAGAGCGATCGGGGCTGCGGGAGG s rn2.chr12 12493220 666 + 46874691 ACCATTTGTGTTTTCTTCTCCTTCTTTGTAAAGCATAGCTGGTTATTTCTTGTG-CCTAGTACTTCAAGGAAG-----------TTTGGTTAATCGAGAATGACACGCAATTTCCTTTCCTTC----TAACAGGATCTTCTT-TTATTTTAGGAGTCC-----------------------------------CAGGCTATTTCTCCAGGCTCAAAGGGAGTGAAGACAAACAAGAAGGTAAGAGCCGGGTTGGAGGCAGCCATTGCTCTCAG---------------------------------------AGGACCGCCTCCAAACTGCTCGGAGAAGGTAGATTTTTGCGCCAG---------------------------------------GATCCCTAGATGCAGTGGCGCGCGAAGACTTCTGGGACATTGAGTTTCTGTGCAACTCCTGGGG--AGAAAAGAGAGCCTTGGAATTCAGACTTCCGGAAAGATGCTGCACATGCGCGTCGCGGTCCGTGCGCGTTCCTGTGCGTGTGC-----------AGGGCCA---CTGCGCCGCTGTGAC-TCCTGCAGGTCCG--TCGTCGAGGCTACCTTCCTTCCCACAGCTTTTGCACCCGCTAAGCTGGAGTCGCCGAGCCTGCGGGAACGAGACCGGAGCTTCCGGGGCGGCA-----GCGAACAGACTCAGCTGTGCTGGCCTGGG-------AGGCCTAGAGGGAGCTCGGCGCGGAGGAC---GACAGTGGCGGCGGGGCCGTCTGCTGGGTGAGGCTGGAGGGCGCAGATCGTTCAGGGCTGCAGGAGG a score=6564.000000 s hg15.chr7_random 1057117 101 + 1057565 CGAAGGGGCGACGGGACCTGGGCCTGGCCCGTGTGTGTCCTC----GGCGGCCTGGCGCCGGCCGTCG-----CTGTACGGTGAGCCCCAGGGAGGCGGATCTGGGCCCC s mm3.chr5 140907874 96 + 149719773 TGAGAGGG-----------AGGCTGGGTCCGTCTGATGGCTTGCAGGGGGGCCTGAGACCGCTTGCCGAGG-CCTGAGCGATCAGCGCCTGCGCGATG--CCTCGGCCCC s rn2.chr12 34427030 95 - 46874691 CGGGAGGG-----------AGGCTGGGTCCGTTTGATTGCTTGC--GGGGGCCTGAGACTTCTTGCGGGGGGCCTGAGCGATCAGCGCCTGCGCCAGG--CCTTGGCTCC